BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3281
(317 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|15450324|gb|AAK96031.1| homeodomain transcription factor Prothoraxless [Tribolium
castaneum]
gi|270002803|gb|EEZ99250.1| antennapedia [Tribolium castaneum]
Length = 323
Score = 288 bits (736), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 204/335 (60%), Positives = 219/335 (65%), Gaps = 30/335 (8%)
Query: 1 MSSYFANSYMPDIKNGGVLPPEH-HQQHHYGATV-LPQNNGVE--DPSMYDP----RQV- 51
MSSYFANSYMPD++NGGV+ EH HQ HYGA V +PQ G DP DP RQ
Sbjct: 1 MSSYFANSYMPDMRNGGVVSAEHPHQHQHYGAAVQVPQGGGAVQPDPGSCDPSVGLRQGI 60
Query: 52 --HHYGQVPNNGQPVHGMPYPRFPPYDRMDIRNAAYYGAHEGGMEQYPRPDSPSMGHMGP 109
HHYG P+ GQP GMPYPRFPPYDRMDIR A YYG + Q RPDSPS HM
Sbjct: 61 PPHHYGGPPSGGQPPQGMPYPRFPPYDRMDIRAAGYYGPQQQMDGQEYRPDSPSSMHMAN 120
Query: 110 Q---NGHQTPVVYASCKLQAAVG--NGIIPGPESPNDLVDPTLNNHHHHQHHHMNHHPHP 164
NGHQT VVYASCKLQAA NG++ GP L ++NNHH M HH
Sbjct: 121 TAAPNGHQTQVVYASCKLQAAAVTQNGVL-GPTGSPPLTTQSMNNHH------MGHHMQE 173
Query: 165 HPQQQQPQQPPPQHMMYAQQPPPQHHQVVVNHQQTPPNQPPSQPPNQPPNQQPNNTSASL 224
Q QHMMY Q HQ HQQ P Q P+Q Q P NT+A+L
Sbjct: 174 QHPQHHQPHHQQQHMMYGGQQGANMHQQGPPHQQPPIQQQPNQG-----QQPPGNTAAAL 228
Query: 225 PSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKI 284
PSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKI
Sbjct: 229 PSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKI 288
Query: 285 WFQNRRMKWKKENKSK--DGGSDAGSDITPATSPQ 317
WFQNRRMKWKKENK+K G G DI+P SPQ
Sbjct: 289 WFQNRRMKWKKENKTKGEGGSEGGGDDISPQGSPQ 323
>gi|86515364|ref|NP_001034505.1| prothoraxless [Tribolium castaneum]
gi|7767519|gb|AAF69136.1|AF228509_1 prothoraxless [Tribolium castaneum]
Length = 325
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 189/337 (56%), Positives = 210/337 (62%), Gaps = 32/337 (9%)
Query: 1 MSSYFANSYMPDIKNGGVLPPEH-HQQHHYGATV-LPQNN-------GVEDPSMYDPRQV 51
MSSYFANSYMPD++NGGV+ EH HQ HYGA V +PQ GV + +
Sbjct: 1 MSSYFANSYMPDMRNGGVVSAEHPHQHQHYGAAVQVPQGGRRRAARPGVVTTPRWGCARA 60
Query: 52 HHYGQV--PNNGQPV-HGMPYPRFPPYDRMDIRNA-AYYGAHEGGMEQYPRPDSPSMGHM 107
+ P G+ GMPYPRFPPYDRMDIR+ + +G + Q RPDSPS HM
Sbjct: 61 SSATTMGGPRYGRAAAQGMPYPRFPPYDRMDIRDRRSLHGPQQQMDGQEYRPDSPSSMHM 120
Query: 108 GPQ---NGHQTPVVYASCKLQAAVG--NGIIPGPESPNDLVDPTLNNHHHHQHHHMNHHP 162
NGHQT VVY SCKLQAA NG++ GP L ++NNHH M HH
Sbjct: 121 ANTAAPNGHQTQVVYDSCKLQAAAVTQNGVL-GPTGSPPLTTQSMNNHH------MGHHM 173
Query: 163 HPHPQQQQPQQPPPQHMMYAQQPPPQHHQVVVNHQQTPPNQPPSQPPNQPPNQQPNNTSA 222
Q QHMMY Q HQ HQQ P Q P+Q Q P NT+A
Sbjct: 174 QEQHPQHHQPHHQQQHMMYGGQQGANMHQQGPPHQQPPIQQQPNQG-----QQPPGNTAA 228
Query: 223 SLPSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQI 282
+LPSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQI
Sbjct: 229 ALPSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQI 288
Query: 283 KIWFQNRRMKWKKENKSK--DGGSDAGSDITPATSPQ 317
KIWFQNRRMKWKKENK+K G G DI+P SPQ
Sbjct: 289 KIWFQNRRMKWKKENKTKGEGGSEGGGDDISPQGSPQ 325
>gi|58585092|ref|NP_001011571.1| homeobox protein H90 [Apis mellifera]
gi|9967824|emb|CAC06383.1| Antennapedia protein [Apis mellifera]
Length = 352
Score = 267 bits (682), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 189/359 (52%), Positives = 211/359 (58%), Gaps = 50/359 (13%)
Query: 1 MSSYFANSYMPDIKNGGVLPPEHHQQHHYGATVLPQNNGVE------------DPSMYDP 48
MSSYFANSY+PD++NGGV P HQQH YGA V DPS+
Sbjct: 1 MSSYFANSYIPDLRNGGVEHPHQHQQH-YGAAVQVPQQTQSVQQQSQQAGDPCDPSLL-- 57
Query: 49 RQV---HHYGQVPNNGQPVHGMPYPRFPPYDRMDIRNAAYY------GAHEGGMEQYPRP 99
RQ HHYG + MPYPRFPPY+RMD+RNA YY G+ GM Y
Sbjct: 58 RQGVPGHHYGAAGSQ----QDMPYPRFPPYNRMDMRNATYYQHQQDHGSGMDGMGGYRSA 113
Query: 100 D-SPSMGHMGPQ---NGH-QTPVVYASCKLQAAVGN---GIIPGPESPNDLVDPTLNNHH 151
SP MGHMG NGH TP+VYASCKLQAA + ++ GP+SP LV+ +++
Sbjct: 114 SPSPGMGHMGHTPTPNGHPSTPIVYASCKLQAAAVDHQGSVLDGPDSP-PLVESQMHHQM 172
Query: 152 HHQHHHMNHHPHPHPQQQQPQQPPP--QHMMYAQQPP---------PQHHQVVVNHQQTP 200
H QH HM H Q Q Q QHMMY QQ P H Q
Sbjct: 173 HTQHPHMQPQQGQHQSQAQQQHLQAHEQHMMYQQQQQSQAASQQSQPGMHPRQQQQAQQH 232
Query: 201 PNQPPSQPPNQPPNQQPNNTSASLPSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFN 260
S Q SA+LPSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFH+N
Sbjct: 233 QGVVTSPLSQQQQAAPQGAASANLPSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHYN 292
Query: 261 RYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSKD--GGSDAGSDITPATSPQ 317
RYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSK G D ++I+P TSPQ
Sbjct: 293 RYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSKGTPGSGDGDTEISPQTSPQ 351
>gi|195446505|ref|XP_002070809.1| GK10824 [Drosophila willistoni]
gi|194166894|gb|EDW81795.1| GK10824 [Drosophila willistoni]
Length = 374
Score = 249 bits (636), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 183/399 (45%), Positives = 205/399 (51%), Gaps = 117/399 (29%)
Query: 1 MSSYFANSYMPDIKNGGVLPPEHHQQHHYGATVLPQNNGVEDPSMYDPRQVHHYGQVPNN 60
M+SYF NSYM + H H+ G NGV D D +Q+HHY Q PN+
Sbjct: 11 MTSYFTNSYMG---------ADMHHGHYPG-------NGVTD---LDAQQMHHYSQNPNH 51
Query: 61 GQPVHGMPYPRFPPYDRMDIRNAAYYGAHEGGMEQYPRPDSPS--MGHMGPQ---NG--- 112
MPYPRFPPYDRM N + + Y RPDSPS +G + PQ NG
Sbjct: 52 ---QGNMPYPRFPPYDRMPYYNGQGMDQQQQQHQGYSRPDSPSSQVGGVMPQTQTNGGQL 108
Query: 113 ----------------------------------------HQTPVVYASCKLQAAVGNGI 132
Q PVVYASCKLQAAVG G+
Sbjct: 109 VNQQQQQQSQNQQQQSQQAPQQLQQQQQQQQQQQQHPQQQQQQPVVYASCKLQAAVGGGL 168
Query: 133 IPGPESPNDLVDPTLNNHH--------HHQHH------------------HMNHHPHPHP 166
PE + + + HH HH H H NHH
Sbjct: 169 GLVPEGGSPPLVDQMGGHHMNAQMTLPHHLGHPQSQLGYTDVGVPDVTEVHQNHHNMGMY 228
Query: 167 QQQQPQQPP------PQHMMYAQQPPPQHHQVVVNHQQTPPNQPPSQPPNQPPNQQPNNT 220
QQQ PP PQ MM+A Q PPQ HQ H P Q + PP+Q PN+
Sbjct: 229 GQQQTGVPPGVGAPGPQGMMHAGQGPPQMHQ---GH--------PGQ--HTPPSQNPNSQ 275
Query: 221 SASLPSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTER 280
S+ +PSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTER
Sbjct: 276 SSGMPSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTER 335
Query: 281 QIKIWFQNRRMKWKKENKSKD--GGSDAGSDITPATSPQ 317
QIKIWFQNRRMKWKKENK+K G G +ITP SPQ
Sbjct: 336 QIKIWFQNRRMKWKKENKTKGEPGSGGEGDEITPPNSPQ 374
>gi|357626567|gb|EHJ76618.1| antennapedia-like proteinue protein [Danaus plexippus]
Length = 303
Score = 247 bits (630), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 177/330 (53%), Positives = 199/330 (60%), Gaps = 51/330 (15%)
Query: 3 SYFANSYMPDIKNGGVLPPEHHQQH-HYGATVLPQNNGVEDPSMYDPRQV-HHYGQVPNN 60
+YF+N+Y+PD++NGG +H Q H HYGA +PQ D R HHY +
Sbjct: 10 TYFSNAYVPDMRNGGH---DHQQAHAHYGA--VPQQGHEMDGCDQQLRPAQHHY-----S 59
Query: 61 GQPVHGMPYPRFPPYDRMDIRNAAYYGAHEGGMEQYPRPDSPS-MGHMGPQ------NGH 113
Q GMPYPRFPPYDR+ YY E + RPDSPS MGHMGP+ NGH
Sbjct: 60 AQTAPGMPYPRFPPYDRL-----GYYQQME---QNGYRPDSPSQMGHMGPKSDGYGPNGH 111
Query: 114 Q--TPVVY-ASCKLQAAVG-NGIIPGPESPNDLVDPTLNNHHHHQHHHMNHHPHPHPQQQ 169
Q P VY +SCK+QAA G +PG SP L HH H HM H P Q
Sbjct: 112 QPPAPAVYPSSCKVQAAAAMAGGVPG--SP-PLEQAQQMPHHMHPQQHMAQHGMP--SHQ 166
Query: 170 QPQQPPPQHMMYAQQPPPQHHQVVVNHQQTPPNQPPSQPPNQPPNQQPNNTSASLPSPLY 229
Q P M + Q PP H Q + Q P Q P NT+ASLPSPLY
Sbjct: 167 QHLMYPVDDMQHQTQMPPMHQQSMHAQQAPP-------------QQPPPNTNASLPSPLY 213
Query: 230 PWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNR 289
PWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNR
Sbjct: 214 PWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNR 273
Query: 290 RMKWKKENKSKD--GGSDAGSDITPATSPQ 317
RMKWKKENK+K G D +++P TSPQ
Sbjct: 274 RMKWKKENKTKGEPGSGDEPDNMSPPTSPQ 303
>gi|194742008|ref|XP_001953501.1| GF17789 [Drosophila ananassae]
gi|190626538|gb|EDV42062.1| GF17789 [Drosophila ananassae]
Length = 378
Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 186/412 (45%), Positives = 206/412 (50%), Gaps = 139/412 (33%)
Query: 1 MSSYFANSYMPDIKNGGVLPPEHHQQHHYGATVLPQNNGVEDPSMYDPRQVHHYGQVPNN 60
M+SYF NSYM + H H+ G NGV D D +Q+H Y Q PN+
Sbjct: 11 MTSYFTNSYMG---------ADMHHGHYPG-------NGVTD---LDAQQMHPYSQNPNH 51
Query: 61 GQPVHGMPYPRFPPYDRMDIRNAAYYGAHEGGMEQ------------YPRPDSPS--MGH 106
MPYPRFPPYDRM N GM+Q Y RPDSPS +G
Sbjct: 52 ---QGNMPYPRFPPYDRMPYYNGQ-------GMDQQQQQQQHQQHQVYSRPDSPSSQVGG 101
Query: 107 MGPQ---NGHQT---------------------------------------------PVV 118
+ PQ NG PVV
Sbjct: 102 VMPQAQTNGQLVAQQQQQPSQNQQQQQQAQGPQHQQQIPQVTQQGTHPQQQQQQQQQPVV 161
Query: 119 YASCKLQAAVGN-GIIPGPESPNDLVDPTLNNHH--------HHQHH------------- 156
YASCKLQAAVG G++P SP LVD + HH HH H
Sbjct: 162 YASCKLQAAVGGLGMVPEGGSP-PLVD-QMTGHHMNAQMSLTHHMGHPQAQLGYTDVGVP 219
Query: 157 -----HMNHHPHPHPQQQQ----PQQPPPQHMMYAQQPPPQHHQVVVNHQQTPPNQPPSQ 207
H NHH QQQ P PPQ MM+ Q P Q HQ H P Q
Sbjct: 220 DVTEVHQNHHNMGMYGQQQTGVPPVGAPPQGMMHQGQGPSQMHQ---GH--------PGQ 268
Query: 208 PPNQPPNQQPNNTSASLPSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRR 267
+ PP+Q PN+ S+ +PSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRR
Sbjct: 269 --HTPPSQNPNSQSSGMPSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRR 326
Query: 268 RIEIAHALCLTERQIKIWFQNRRMKWKKENKSKD--GGSDAGSDITPATSPQ 317
RIEIAHALCLTERQIKIWFQNRRMKWKKENK+K G G +ITP SPQ
Sbjct: 327 RIEIAHALCLTERQIKIWFQNRRMKWKKENKTKGEPGSGGEGDEITPPNSPQ 378
>gi|112983708|ref|NP_001037319.1| antennapedia homologue protein [Bombyx mori]
gi|391615|dbj|BAA04087.1| Antennapedia homologue protein [Bombyx mori]
gi|426204115|gb|AFY12623.1| antennapedia-like protein [Bombyx mori]
Length = 259
Score = 234 bits (598), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 155/269 (57%), Positives = 168/269 (62%), Gaps = 38/269 (14%)
Query: 61 GQPVHGMPYPRFPPYDRMDIRNAAYYGAHEGGMEQYPRPDSPS-MGHMGPQ------NGH 113
QP GMPYPRFPPYDR+ YY E + RPDSPS MGHMGP+ NGH
Sbjct: 17 AQPAPGMPYPRFPPYDRL-----GYYQQME---QNGYRPDSPSQMGHMGPKTDGYGPNGH 68
Query: 114 Q--TPVVYASCKLQAAVGNG-IIPGPESPNDLVDPTLNNHHHHQHHHMNHHPHPHPQQQQ 170
Q TP VY SCKLQAA G +PG SP + +H H Q H + H PH QQ
Sbjct: 69 QPATPAVYTSCKLQAAAATGGAVPG--SPPLEQAQQMPHHMHPQQHMVQHGVPPH---QQ 123
Query: 171 PQQPPPQHMMYAQQPPPQHHQVVVNHQQTPPNQPPSQPPNQPPNQQPNNTSASLPSPLYP 230
P M + Q PP H Q + Q P Q P NT SLPSPLYP
Sbjct: 124 HLMYPVDDMQHQTQMPPMHQQSMHAQQPPP-------------QQPPPNTKPSLPSPLYP 170
Query: 231 WMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRR 290
WMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRR
Sbjct: 171 WMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRR 230
Query: 291 MKWKKENKSKD--GGSDAGSDITPATSPQ 317
MKWKKENK+K G D +++P TSPQ
Sbjct: 231 MKWKKENKTKGEPGSGDEPDNMSPPTSPQ 259
>gi|195389692|ref|XP_002053510.1| antennapedia [Drosophila virilis]
gi|194151596|gb|EDW67030.1| antennapedia [Drosophila virilis]
Length = 376
Score = 223 bits (569), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 182/403 (45%), Positives = 203/403 (50%), Gaps = 123/403 (30%)
Query: 1 MSSYFANSYMPDIKNGGVLPPEHHQQHHYGATVLPQNNGVEDPSMYDPRQVHHYGQVPNN 60
M+SYF NSYM + H H+ G NGV D D +Q+HHY Q PN
Sbjct: 11 MTSYFTNSYMG---------ADMHHGHYPG-------NGVTD---LDAQQMHHYSQNPNQ 51
Query: 61 GQPVHGMPYPRFPPYDRMDIRNAAYYGAHEGGMEQYPRPDSPS--MGHMGPQ---NGHQT 115
MPYPRFPPYDRM N + + Y RPDSPS +G + PQ NG
Sbjct: 52 ---QGNMPYPRFPPYDRMPYYNGQGMDQQQQQHQGYSRPDSPSSQVGGVMPQAQTNGQLV 108
Query: 116 PV----------------------------------------------VYASCKLQAAVG 129
V VYASCKLQAAVG
Sbjct: 109 SVAQQQQQTQQQQQAQTQQQQAQQAPLQQQQHPQVTQQVTHPQQQQPVVYASCKLQAAVG 168
Query: 130 N-GIIPGPESPNDLVDPTLNNHH--------HHQHH------------------HMNHHP 162
G++ SP LVD + HH HH H H NHH
Sbjct: 169 GLGMVQEGGSP-PLVD-QMGGHHMNAQMTLPHHMGHPQAQLGYTDVGVPDVTEVHQNHHN 226
Query: 163 HPHPQQQQ----PQQPPPQHMMY--AQQPPPQHHQVVVNHQQTPPNQPPSQPPNQPPNQQ 216
QQQ P PPQ MM+ A Q PPQ HQ P Q + PP+Q
Sbjct: 227 MGMYGQQQTGVPPVVAPPQAMMHPGAGQGPPQMHQ-------GHPGQ------HTPPSQN 273
Query: 217 PNNTSASLPSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALC 276
P++ S+ +PSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALC
Sbjct: 274 PSSQSSGMPSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALC 333
Query: 277 LTERQIKIWFQNRRMKWKKENKSKD--GGSDAGSDITPATSPQ 317
LTERQIKIWFQNRRMKWKKENK+K G G +ITP SPQ
Sbjct: 334 LTERQIKIWFQNRRMKWKKENKTKGEPGSGGEGDEITPPNSPQ 376
>gi|198453463|ref|XP_002137673.1| antp, isoform A [Drosophila pseudoobscura pseudoobscura]
gi|198132367|gb|EDY68231.1| antp, isoform A [Drosophila pseudoobscura pseudoobscura]
Length = 392
Score = 223 bits (569), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 132/234 (56%), Positives = 145/234 (61%), Gaps = 44/234 (18%)
Query: 116 PVVYASCKLQAAVGNGIIPGPESPNDLVDPTLNNHH--------HHQHH----------- 156
PVVYASCKLQAAVG G+ PE + + + HH HH H
Sbjct: 171 PVVYASCKLQAAVGVGLGLVPEGGSPPLVDQMTGHHMNAQMSLPHHMGHPQAQLGYTDVG 230
Query: 157 -------HMNHHPHPHPQQQQ----PQQPPPQHMMYAQQPPPQHHQVVVNHQQTPPNQPP 205
H NHH QQQ P PPQ MM+ Q PPQ HQ ++ Q TPP+Q
Sbjct: 231 VPDVTEVHQNHHNMGMYGQQQTGVPPVGAPPQAMMHQGQGPPQMHQGHLSGQHTPPSQ-- 288
Query: 206 SQPPNQPPNQQPNNTSASLPSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTR 265
PN+ S+ +PSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTR
Sbjct: 289 ----------NPNSQSSGMPSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTR 338
Query: 266 RRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSKD--GGSDAGSDITPATSPQ 317
RRRIEIAHALCLTERQIKIWFQNRRMKWKKENK+K G G +ITP SPQ
Sbjct: 339 RRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTKGEPGSGGEGDEITPPNSPQ 392
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 51/104 (49%), Gaps = 23/104 (22%)
Query: 1 MSSYFANSYMPDIKNGGVLPPEHHQQHHYGATVLPQNNGVEDPSMYDPRQVHHYGQVPNN 60
M+SYF NSYM + H H+ G NGV D D +Q+HHY Q PN+
Sbjct: 11 MTSYFTNSYMGA---------DMHHGHYPG-------NGVTD---LDAQQMHHYSQNPNH 51
Query: 61 GQPVHGMPYPRFPPYDRMDIRN-AAYYGAHEGGMEQYPRPDSPS 103
MPYPRFPPYDRM N + + Y RPDSPS
Sbjct: 52 ---QGNMPYPRFPPYDRMPYYNGQGMDQQQQQQHQGYSRPDSPS 92
>gi|195152057|ref|XP_002016955.1| GL22036 [Drosophila persimilis]
gi|194112012|gb|EDW34055.1| GL22036 [Drosophila persimilis]
Length = 395
Score = 223 bits (569), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 132/234 (56%), Positives = 145/234 (61%), Gaps = 44/234 (18%)
Query: 116 PVVYASCKLQAAVGNGIIPGPESPNDLVDPTLNNHH--------HHQHH----------- 156
PVVYASCKLQAAVG G+ PE + + + HH HH H
Sbjct: 174 PVVYASCKLQAAVGVGLGLVPEGGSPPLVDQMTGHHMNAQMSLPHHMGHPQAQLGYTDVG 233
Query: 157 -------HMNHHPHPHPQQQQ----PQQPPPQHMMYAQQPPPQHHQVVVNHQQTPPNQPP 205
H NHH QQQ P PPQ MM+ Q PPQ HQ ++ Q TPP+Q
Sbjct: 234 VPDVTEVHQNHHNMGMYGQQQTGVPPVGAPPQAMMHQGQGPPQMHQGHLSGQHTPPSQ-- 291
Query: 206 SQPPNQPPNQQPNNTSASLPSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTR 265
PN+ S+ +PSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTR
Sbjct: 292 ----------NPNSQSSGMPSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTR 341
Query: 266 RRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSKD--GGSDAGSDITPATSPQ 317
RRRIEIAHALCLTERQIKIWFQNRRMKWKKENK+K G G +ITP SPQ
Sbjct: 342 RRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTKGEPGSGGEGDEITPPNSPQ 395
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 51/105 (48%), Gaps = 24/105 (22%)
Query: 1 MSSYFANSYMPDIKNGGVLPPEHHQQHHYGATVLPQNNGVEDPSMYDPRQVHHYGQVPNN 60
M+SYF NSYM + H H+ G NGV D D +Q+HHY Q PN+
Sbjct: 11 MTSYFTNSYMGA---------DMHHGHYPG-------NGVTD---LDAQQMHHYSQNPNH 51
Query: 61 GQPVHGMPYPRFPPYDRMDIRN--AAYYGAHEGGMEQYPRPDSPS 103
MPYPRFPPYDRM N + + Y RPDSPS
Sbjct: 52 ---QGNMPYPRFPPYDRMPYYNGQGMDQQQQQQQHQGYSRPDSPS 93
>gi|58382029|ref|XP_311618.2| AGAP004660-PA [Anopheles gambiae str. PEST]
gi|3420836|gb|AAC31945.1| Antennapedia homeotic protein [Anopheles gambiae]
gi|55242653|gb|EAA07256.2| AGAP004660-PA [Anopheles gambiae str. PEST]
Length = 324
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 164/346 (47%), Positives = 183/346 (52%), Gaps = 63/346 (18%)
Query: 1 MSSYFANSYMPDIKNGGVLPPEHHQQHHYGATVLPQNNGVEDPSMYDPRQVHHYGQVPNN 60
M+SYF NSYM +G HY T GV+ HH N
Sbjct: 11 MTSYFTNSYMNSDMHG-----------HYPGT------GVDGLDTSQQMYSHHNQAHANQ 53
Query: 61 GQPVHGMPYPRFPPYDRMDIRNAAYYGAHEGGME--QYPRPDSPSM---GHMGPQ-NGHQ 114
+ PYPRFPPYDRM G ++ M+ Y R DSPS G + PQ NG+
Sbjct: 54 ---ANMPPYPRFPPYDRM--------GYYQQTMDPAGYARADSPSSQVGGVIPPQSNGNP 102
Query: 115 TP-----------VVYASCKLQAAVGNGIIPGPESPNDLVDPTLNNHHHHQ--------H 155
+VYASCKLQAAVGNG + P L+ HH
Sbjct: 103 LQQTQVQPQQQQPIVYASCKLQAAVGNGPNGLGTYGTENGSPPLDQMGHHMGTAQMTIPQ 162
Query: 156 HHMNHHPHPHPQQQQPQQPPPQHMMYAQQ----PPPQHHQVVVNHQQTPPNQPPSQPPNQ 211
HHM H +Q Q P MY P Q + HQQ PP Q P
Sbjct: 163 HHMGHSQGQECYPEQVHQTPQHMAMYTNAGGGPPGVTQQQPNMMHQQPPPLHQGQQAP-- 220
Query: 212 PPNQQPNNTSASLPSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEI 271
PN Q N S+ L SPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEI
Sbjct: 221 -PNSQ--NASSGLQSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEI 277
Query: 272 AHALCLTERQIKIWFQNRRMKWKKENKSK-DGGSDAGSDITPATSP 316
AHALCLTERQIKIWFQNRRMKWKKENK+K + GS +D+TP SP
Sbjct: 278 AHALCLTERQIKIWFQNRRMKWKKENKTKGEPGSGDENDMTPPQSP 323
>gi|45553279|ref|NP_996166.1| antennapedia, isoform K [Drosophila melanogaster]
gi|45553293|ref|NP_996173.1| antennapedia, isoform G [Drosophila melanogaster]
gi|45446385|gb|AAS65105.1| antennapedia, isoform G [Drosophila melanogaster]
gi|45446386|gb|AAS65106.1| antennapedia, isoform K [Drosophila melanogaster]
Length = 361
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 133/218 (61%), Positives = 145/218 (66%), Gaps = 34/218 (15%)
Query: 119 YASCKLQAAVGN-GIIPGPESPNDLVDPTLNNHH--------HHQHH-----HMNHHPHP 164
YASCKLQAAVG G++P SP LVD ++ HH HH H H NHH
Sbjct: 159 YASCKLQAAVGGLGMVPEGGSP-PLVD-QMSGHHMNAQMTLPHHMGHPQAQVHQNHHNMG 216
Query: 165 HPQQQQ---PQQPPPQHMMYAQQPPPQHHQVVVNHQQTPPNQPPSQPPNQPPNQQPNNTS 221
QQQ P PPQ MM+ Q PPQ HQ P Q + PP+Q PN+ S
Sbjct: 217 MYQQQSGVPPVGAPPQGMMHQGQGPPQMHQ-------GHPGQ------HTPPSQNPNSQS 263
Query: 222 ASLPSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQ 281
+ +PSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQ
Sbjct: 264 SGMPSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQ 323
Query: 282 IKIWFQNRRMKWKKENKSKD--GGSDAGSDITPATSPQ 317
IKIWFQNRRMKWKKENK+K G G +ITP SPQ
Sbjct: 324 IKIWFQNRRMKWKKENKTKGEPGSGGEGDEITPPNSPQ 361
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 52/109 (47%), Gaps = 35/109 (32%)
Query: 1 MSSYFANSYMPDIKNGGVLPPEHHQQHHYGATVLPQNNGVEDPSMYDPRQVHHYGQVPNN 60
M+SYF NSYM + H H+ G NGV D D +Q+HHY Q N+
Sbjct: 11 MTSYFTNSYMG---------ADMHHGHYPG-------NGVTD---LDAQQMHHYSQNANH 51
Query: 61 GQPVHGMPYPRFPPYDRMDIRNAAYYGAHEGGMEQ------YPRPDSPS 103
MPYPRFPPYDRM N GM+Q Y RPDSPS
Sbjct: 52 ---QGNMPYPRFPPYDRMPYYNGQ-------GMDQQQQHQVYSRPDSPS 90
>gi|34398398|gb|AAQ67266.1| antennapedia [Drosophila virilis]
Length = 380
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 182/407 (44%), Positives = 203/407 (49%), Gaps = 127/407 (31%)
Query: 1 MSSYFANSYMPDIKNGGVLPPEHHQQHHYGATVLPQNNGVEDPSMYDPRQVHHYGQVPNN 60
M+SYF NSYM + H H+ G NGV D D +Q+HHY Q PN
Sbjct: 11 MTSYFTNSYMG---------ADMHHGHYPG-------NGVTD---LDAQQMHHYSQNPNQ 51
Query: 61 GQPVHGMPYPRFPPYDRMDIRNAAYYGAHEGGMEQYPRPDSPS--MGHMGPQ---NGHQT 115
MPYPRFPPYDRM N + + Y RPDSPS +G + PQ NG
Sbjct: 52 ---QGNMPYPRFPPYDRMPYYNGQGMDQQQQQHQGYSRPDSPSSQVGGVMPQAQTNGQLV 108
Query: 116 PV----------------------------------------------VYASCKLQAAVG 129
V VYASCKLQAAVG
Sbjct: 109 SVAQQQQQTQQQQQAQTQQQQAQQAPLQQQQHPQVTQQVTHPQQQQPVVYASCKLQAAVG 168
Query: 130 N-GIIPGPESPNDLVDPTLNNHH--------HHQHH------------------HMNHHP 162
G++ SP LVD + HH HH H H NHH
Sbjct: 169 GLGMVQEGGSP-PLVD-QMGGHHMNAQMTLPHHMGHPQAQLGYTDVGVPDVTEVHQNHHN 226
Query: 163 HPHPQQQQ----PQQPPPQHMMY--AQQPPPQHHQVVVNHQQTPPNQPPSQPPNQPPNQQ 216
QQQ P PPQ MM+ A Q PPQ HQ P Q + PP+Q
Sbjct: 227 MGMYGQQQTGVPPVVAPPQAMMHPGAGQGPPQMHQ-------GHPGQ------HTPPSQN 273
Query: 217 PNNTSASLPSPLYPWMRSQF----ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIA 272
P++ S+ +PSPLYPWMRSQF ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIA
Sbjct: 274 PSSQSSGMPSPLYPWMRSQFGKCQERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIA 333
Query: 273 HALCLTERQIKIWFQNRRMKWKKENKSKD--GGSDAGSDITPATSPQ 317
HALCLTERQIKIWFQNRRMKWKKENK+K G G +ITP SPQ
Sbjct: 334 HALCLTERQIKIWFQNRRMKWKKENKTKGEPGSGGEGDEITPPNSPQ 380
>gi|157124729|ref|XP_001660496.1| homeotic antennapedia protein, putative [Aedes aegypti]
gi|108873900|gb|EAT38125.1| AAEL009947-PA [Aedes aegypti]
Length = 325
Score = 218 bits (554), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 169/354 (47%), Positives = 190/354 (53%), Gaps = 78/354 (22%)
Query: 1 MSSYFANSYMPDIKNGGVLPPEHHQQHHYGATVLPQNNGVEDPS-MYDPRQVHHY-GQVP 58
M+SYF NSYM +G HY T + +G++ MY Q H G +P
Sbjct: 11 MTSYFTNSYMNSDMHG-----------HYPGTGV---DGLDTSQQMYHHSQSHASQGNMP 56
Query: 59 NNGQPVHGMPYPRFPPYDRMDIRNAAYYGAHEGGME--QYPRPDSPS--MGHMGPQ--NG 112
PYPRFPPYDRM G ++ M+ Y R DSPS +G + PQ NG
Sbjct: 57 ---------PYPRFPPYDRM--------GYYQQNMDPAGYARADSPSSQVGGVIPQQTNG 99
Query: 113 HQTP-----------VVYASCKLQAAVGNGIIPGPESPNDLVDPTLNNHH---HHQHHHM 158
+ +VYASCKLQAAVGNG PN L N HHM
Sbjct: 100 NPLQQTQVQPQQQQPIVYASCKLQAAVGNG-------PNGLGTYGAENGSPPLEQMGHHM 152
Query: 159 NHHPHPHPQ------QQQPQQPP------PQHM-MYAQQPPPQHHQVVVNHQQTPPNQPP 205
N PQ Q Q PP PQHM MY V QPP
Sbjct: 153 NTAQMTIPQHHMGHAQGQDCFPPDQVHQNPQHMGMYTNTGGGPPGVVPQQPPNMMHQQPP 212
Query: 206 SQPPNQ--PPNQQPNNTSASLPSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYL 263
Q PPN Q N+++ L SPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYL
Sbjct: 213 QLHQGQQPPPNSQ--NSNSGLQSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYL 270
Query: 264 TRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSK-DGGSDAGSDITPATSP 316
TRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK+K + GS +D+TP SP
Sbjct: 271 TRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTKGEPGSGDENDMTPPQSP 324
>gi|170029597|ref|XP_001842678.1| homeotic antennapedia protein [Culex quinquefasciatus]
gi|167863997|gb|EDS27380.1| homeotic antennapedia protein [Culex quinquefasciatus]
Length = 331
Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 168/360 (46%), Positives = 190/360 (52%), Gaps = 84/360 (23%)
Query: 1 MSSYFANSYMPDIKNGGVLPPEHHQQHHYGATVLPQNNGVEDPSMYDPRQVHHYGQVPNN 60
M+SYF NSYM +G HY T GV+ + +Q++H+ Q
Sbjct: 11 MTSYFTNSYMNSDMHG-----------HYPGT------GVD--GLDTSQQMYHHSQ---- 47
Query: 61 GQPVHGM--PYPRFPPYDRMDIRNAAYYGAHEGGME--QYPRPDSPS--MGHMGPQNGHQ 114
G G PYPRFPPYDRM G ++ M+ Y R DSPS +G + PQ +
Sbjct: 48 GHAGQGNMPPYPRFPPYDRM--------GYYQQNMDPAGYARADSPSSQVGGVIPQQTNG 99
Query: 115 TP-------------------VVYASCKLQAAVGNGIIPGPESPNDLVDPTLNNHH---H 152
P +VYASCKLQAAVGNG PN L N
Sbjct: 100 NPLQQTQVPPQQQQQQQQQQPIVYASCKLQAAVGNG-------PNGLGTYGAENGSPPLE 152
Query: 153 HQHHHMNHHPHPHPQ------QQQPQQPP------PQHM-MYAQQPPPQHHQVVVNHQQT 199
HHMN PQ Q Q PP PQHM MY V
Sbjct: 153 QMGHHMNTAQMTIPQHHMGHAQGQDCFPPDQVHQNPQHMGMYTNTGGGPPGVVPQQPPNM 212
Query: 200 PPNQPPSQPPNQ--PPNQQPNNTSASLPSPLYPWMRSQFERKRGRQTYTRYQTLELEKEF 257
QPP Q PPN Q N+++ L SPLYPWMRSQFERKRGRQTYTRYQTLELEKEF
Sbjct: 213 MHQQPPQLHQGQQPPPNSQ--NSNSGLQSPLYPWMRSQFERKRGRQTYTRYQTLELEKEF 270
Query: 258 HFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSK-DGGSDAGSDITPATSP 316
HFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK+K + GS +D+TP SP
Sbjct: 271 HFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTKGEPGSGDENDMTPPQSP 330
>gi|34395628|sp|Q24645.1|ANTP_DROSU RecName: Full=Homeotic protein antennapedia
gi|829192|emb|CAA43307.1| Antp [Drosophila subobscura]
Length = 394
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 132/238 (55%), Positives = 144/238 (60%), Gaps = 48/238 (20%)
Query: 116 PVVYASCKLQAAVGNGIIPGPESPNDLVDPTLNNHH--------HHQHH----------- 156
PVVYASCKLQAAVG G+ PE + + + HH HH H
Sbjct: 169 PVVYASCKLQAAVGVGLGMVPEGGSPPLVDQMTGHHMNAQMSLPHHMGHPQAQLGYTDVG 228
Query: 157 -------HMNHHPHPHPQQQQ----PQQPPPQHMMYAQQPPPQHHQVVVNHQQTPPNQPP 205
H NHH QQQ P PPQ MM+ Q PPQ HQ + Q TPP+Q
Sbjct: 229 VPDVTEVHQNHHNMGMYGQQQTGVPPVGAPPQAMMHQGQGPPQMHQGHLPGQHTPPSQ-- 286
Query: 206 SQPPNQPPNQQPNNTSASLPSPLYPWMRSQF----ERKRGRQTYTRYQTLELEKEFHFNR 261
PN+ S+ +PSPLYPWMRSQF ERKRGRQTYTRYQTLELEKEFHFNR
Sbjct: 287 ----------NPNSQSSGMPSPLYPWMRSQFGKCQERKRGRQTYTRYQTLELEKEFHFNR 336
Query: 262 YLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSKD--GGSDAGSDITPATSPQ 317
YLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK+K G G +ITP SPQ
Sbjct: 337 YLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTKGEPGSGGEGDEITPPNSPQ 394
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 51/103 (49%), Gaps = 22/103 (21%)
Query: 1 MSSYFANSYMPDIKNGGVLPPEHHQQHHYGATVLPQNNGVEDPSMYDPRQVHHYGQVPNN 60
M+SYF NSYM + H H+ G NGV D D +Q+HHY Q PN+
Sbjct: 11 MTSYFTNSYMGA---------DMHHGHYPG-------NGVTD---LDAQQMHHYSQNPNH 51
Query: 61 GQPVHGMPYPRFPPYDRMDIRNAAYYGAHEGGMEQYPRPDSPS 103
MPYPRFPPYDRM N + + Y RPDSPS
Sbjct: 52 ---QGNMPYPRFPPYDRMPYYNGQGMDQQQQQHQGYSRPDSPS 91
>gi|45553289|ref|NP_996171.1| antennapedia, isoform N [Drosophila melanogaster]
gi|45553295|ref|NP_996174.1| antennapedia, isoform D [Drosophila melanogaster]
gi|195344085|ref|XP_002038619.1| GM10522 [Drosophila sechellia]
gi|195568836|ref|XP_002102418.1| GD19515 [Drosophila simulans]
gi|45446389|gb|AAS65109.1| antennapedia, isoform D [Drosophila melanogaster]
gi|45446390|gb|AAS65110.1| antennapedia, isoform N [Drosophila melanogaster]
gi|194133640|gb|EDW55156.1| GM10522 [Drosophila sechellia]
gi|194198345|gb|EDX11921.1| GD19515 [Drosophila simulans]
Length = 374
Score = 214 bits (544), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 133/231 (57%), Positives = 145/231 (62%), Gaps = 47/231 (20%)
Query: 119 YASCKLQAAVGN-GIIPGPESPNDLVDPTLNNHH--------HHQHH------------- 156
YASCKLQAAVG G++P SP LVD ++ HH HH H
Sbjct: 159 YASCKLQAAVGGLGMVPEGGSP-PLVD-QMSGHHMNAQMTLPHHMGHPQAQLGYTDVGVP 216
Query: 157 -----HMNHHPHPHPQQQQ---PQQPPPQHMMYAQQPPPQHHQVVVNHQQTPPNQPPSQP 208
H NHH QQQ P PPQ MM+ Q PPQ HQ P Q
Sbjct: 217 DVTEVHQNHHNMGMYQQQSGVPPVGAPPQGMMHQGQGPPQMHQ-------GHPGQ----- 264
Query: 209 PNQPPNQQPNNTSASLPSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRR 268
+ PP+Q PN+ S+ +PSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRR
Sbjct: 265 -HTPPSQNPNSQSSGMPSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRR 323
Query: 269 IEIAHALCLTERQIKIWFQNRRMKWKKENKSKD--GGSDAGSDITPATSPQ 317
IEIAHALCLTERQIKIWFQNRRMKWKKENK+K G G +ITP SPQ
Sbjct: 324 IEIAHALCLTERQIKIWFQNRRMKWKKENKTKGEPGSGGEGDEITPPNSPQ 374
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 52/109 (47%), Gaps = 35/109 (32%)
Query: 1 MSSYFANSYMPDIKNGGVLPPEHHQQHHYGATVLPQNNGVEDPSMYDPRQVHHYGQVPNN 60
M+SYF NSYM + H H+ G NGV D D +Q+HHY Q N+
Sbjct: 11 MTSYFTNSYMG---------ADMHHGHYPG-------NGVTD---LDAQQMHHYSQNANH 51
Query: 61 GQPVHGMPYPRFPPYDRMDIRNAAYYGAHEGGMEQ------YPRPDSPS 103
MPYPRFPPYDRM N GM+Q Y RPDSPS
Sbjct: 52 ---QGNMPYPRFPPYDRMPYYNGQ-------GMDQQQQHQVYSRPDSPS 90
>gi|195498909|ref|XP_002096727.1| GE25826 [Drosophila yakuba]
gi|194182828|gb|EDW96439.1| GE25826 [Drosophila yakuba]
Length = 375
Score = 214 bits (544), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 133/231 (57%), Positives = 145/231 (62%), Gaps = 47/231 (20%)
Query: 119 YASCKLQAAVGN-GIIPGPESPNDLVDPTLNNHH--------HHQHH------------- 156
YASCKLQAAVG G++P SP LVD ++ HH HH H
Sbjct: 160 YASCKLQAAVGGLGMVPEGGSP-PLVD-QMSGHHMNAQMTLPHHMGHPQAQLGYTDVGVP 217
Query: 157 -----HMNHHPHPHPQQQQ---PQQPPPQHMMYAQQPPPQHHQVVVNHQQTPPNQPPSQP 208
H NHH QQQ P PPQ MM+ Q PPQ HQ P Q
Sbjct: 218 DVTEVHQNHHNMGMYQQQSGVPPVGAPPQGMMHQGQGPPQMHQ-------GHPGQ----- 265
Query: 209 PNQPPNQQPNNTSASLPSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRR 268
+ PP+Q PN+ S+ +PSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRR
Sbjct: 266 -HTPPSQNPNSQSSGMPSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRR 324
Query: 269 IEIAHALCLTERQIKIWFQNRRMKWKKENKSKD--GGSDAGSDITPATSPQ 317
IEIAHALCLTERQIKIWFQNRRMKWKKENK+K G G +ITP SPQ
Sbjct: 325 IEIAHALCLTERQIKIWFQNRRMKWKKENKTKGEPGSGGEGDEITPPNSPQ 375
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 50/103 (48%), Gaps = 22/103 (21%)
Query: 1 MSSYFANSYMPDIKNGGVLPPEHHQQHHYGATVLPQNNGVEDPSMYDPRQVHHYGQVPNN 60
M+SYF NSYM + H H+ G NGV D D +Q+HHY Q N+
Sbjct: 11 MTSYFTNSYMG---------ADMHHGHYPG-------NGVTD---LDAQQMHHYSQNANH 51
Query: 61 GQPVHGMPYPRFPPYDRMDIRNAAYYGAHEGGMEQYPRPDSPS 103
MPYPRFPPYDRM N + + Y RPDSPS
Sbjct: 52 ---QGNMPYPRFPPYDRMPYYNGQGMDQQQQQHQVYSRPDSPS 91
>gi|194899155|ref|XP_001979126.1| antp [Drosophila erecta]
gi|190650829|gb|EDV48084.1| antp [Drosophila erecta]
Length = 374
Score = 214 bits (544), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 133/231 (57%), Positives = 145/231 (62%), Gaps = 47/231 (20%)
Query: 119 YASCKLQAAVGN-GIIPGPESPNDLVDPTLNNHH--------HHQHH------------- 156
YASCKLQAAVG G++P SP LVD ++ HH HH H
Sbjct: 159 YASCKLQAAVGGLGMVPEGGSP-PLVD-QMSGHHMNAQMTLPHHMGHPQAQLGYTDVGVP 216
Query: 157 -----HMNHHPHPHPQQQQ---PQQPPPQHMMYAQQPPPQHHQVVVNHQQTPPNQPPSQP 208
H NHH QQQ P PPQ MM+ Q PPQ HQ P Q
Sbjct: 217 DVTEVHQNHHNMGMYQQQSGVPPVGAPPQGMMHQGQGPPQMHQ-------GHPGQ----- 264
Query: 209 PNQPPNQQPNNTSASLPSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRR 268
+ PP+Q PN+ S+ +PSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRR
Sbjct: 265 -HTPPSQNPNSQSSGMPSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRR 323
Query: 269 IEIAHALCLTERQIKIWFQNRRMKWKKENKSKD--GGSDAGSDITPATSPQ 317
IEIAHALCLTERQIKIWFQNRRMKWKKENK+K G G +ITP SPQ
Sbjct: 324 IEIAHALCLTERQIKIWFQNRRMKWKKENKTKGEPGSGGEGDEITPPNSPQ 374
>gi|195110409|ref|XP_001999774.1| GI24713 [Drosophila mojavensis]
gi|193916368|gb|EDW15235.1| GI24713 [Drosophila mojavensis]
Length = 378
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 184/412 (44%), Positives = 204/412 (49%), Gaps = 139/412 (33%)
Query: 1 MSSYFANSYMPDIKNGGVLPPEHHQQHHYGATVLPQNNGVEDPSMYDPRQVHHYGQVPNN 60
M+SYF NSYM + H H+ G NGV D D +Q+HHY Q PN
Sbjct: 11 MTSYFTNSYMG---------ADMHHGHYPG-------NGVTD---LDAQQMHHYSQNPNQ 51
Query: 61 GQPVHGMPYPRFPPYDRMDIRNAAYYGAHEGGMEQ----------YPRPDSPS--MGHMG 108
MPYPRFPPYDRM N GM+Q Y RPDSPS +G +
Sbjct: 52 ---QGNMPYPRFPPYDRMPYYNGQ-------GMDQQQQQQQQHQGYSRPDSPSSQVGGVM 101
Query: 109 PQ---NGHQTP---------------------------------------------VVYA 120
PQ NG VVYA
Sbjct: 102 PQAQTNGQLVQQQQQQQSQQQQAQTQQQQQQAQQAPLQQQHPQVTQQVTHPQQQQPVVYA 161
Query: 121 SCKLQAAVGN-GIIPGPESPNDLVDPTLNNHH--------HHQHH--------------- 156
SCKLQAAVG G++ SP LVD + HH HH H
Sbjct: 162 SCKLQAAVGGLGMVQEGGSP-PLVD-QMGGHHMNAQMSLPHHMGHPQAQLGYTDVGVPDV 219
Query: 157 ---HMNHHPHPHPQQQQPQQPPP----QHMMY--AQQPPPQHHQVVVNHQQTPPNQPPSQ 207
H NHH QQQ PP Q MM+ A Q PPQ HQ P Q
Sbjct: 220 TEVHQNHHNMGMYGQQQTVVPPVVAPPQAMMHPGAGQGPPQMHQ-------GHPGQ---- 268
Query: 208 PPNQPPNQQPNNTSASLPSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRR 267
+ PP+Q P++ S+ +PSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRR
Sbjct: 269 --HTPPSQNPSSQSSGMPSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRR 326
Query: 268 RIEIAHALCLTERQIKIWFQNRRMKWKKENKSKD--GGSDAGSDITPATSPQ 317
RIEIAHALCLTERQIKIWFQNRRMKWKKENK+K G G +ITP SPQ
Sbjct: 327 RIEIAHALCLTERQIKIWFQNRRMKWKKENKTKGEPGSGGEGDEITPPNSPQ 378
>gi|45553285|ref|NP_996169.1| antennapedia, isoform F [Drosophila melanogaster]
gi|45553291|ref|NP_996172.1| antennapedia, isoform E [Drosophila melanogaster]
gi|45446387|gb|AAS65107.1| antennapedia, isoform E [Drosophila melanogaster]
gi|45446388|gb|AAS65108.1| antennapedia, isoform F [Drosophila melanogaster]
Length = 365
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 133/222 (59%), Positives = 145/222 (65%), Gaps = 38/222 (17%)
Query: 119 YASCKLQAAVGN-GIIPGPESPNDLVDPTLNNHH--------HHQHH-----HMNHHPHP 164
YASCKLQAAVG G++P SP LVD ++ HH HH H H NHH
Sbjct: 159 YASCKLQAAVGGLGMVPEGGSP-PLVD-QMSGHHMNAQMTLPHHMGHPQAQVHQNHHNMG 216
Query: 165 HPQQQQ---PQQPPPQHMMYAQQPPPQHHQVVVNHQQTPPNQPPSQPPNQPPNQQPNNTS 221
QQQ P PPQ MM+ Q PPQ HQ P Q + PP+Q PN+ S
Sbjct: 217 MYQQQSGVPPVGAPPQGMMHQGQGPPQMHQ-------GHPGQ------HTPPSQNPNSQS 263
Query: 222 ASLPSPLYPWMRSQF----ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 277
+ +PSPLYPWMRSQF ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL
Sbjct: 264 SGMPSPLYPWMRSQFGKCQERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 323
Query: 278 TERQIKIWFQNRRMKWKKENKSKD--GGSDAGSDITPATSPQ 317
TERQIKIWFQNRRMKWKKENK+K G G +ITP SPQ
Sbjct: 324 TERQIKIWFQNRRMKWKKENKTKGEPGSGGEGDEITPPNSPQ 365
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 52/109 (47%), Gaps = 35/109 (32%)
Query: 1 MSSYFANSYMPDIKNGGVLPPEHHQQHHYGATVLPQNNGVEDPSMYDPRQVHHYGQVPNN 60
M+SYF NSYM + H H+ G NGV D D +Q+HHY Q N+
Sbjct: 11 MTSYFTNSYMG---------ADMHHGHYPG-------NGVTD---LDAQQMHHYSQNANH 51
Query: 61 GQPVHGMPYPRFPPYDRMDIRNAAYYGAHEGGMEQ------YPRPDSPS 103
MPYPRFPPYDRM N GM+Q Y RPDSPS
Sbjct: 52 ---QGNMPYPRFPPYDRMPYYNGQ-------GMDQQQQHQVYSRPDSPS 90
>gi|297591838|gb|ADI46796.1| RE64079p [Drosophila melanogaster]
Length = 378
Score = 208 bits (529), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 133/235 (56%), Positives = 145/235 (61%), Gaps = 51/235 (21%)
Query: 119 YASCKLQAAVGN-GIIPGPESPNDLVDPTLNNHH--------HHQHH------------- 156
YASCKLQAAVG G++P SP LVD ++ HH HH H
Sbjct: 159 YASCKLQAAVGGLGMVPEGGSP-PLVD-QMSGHHMNAQMTLPHHMGHPQAQLGYTDVGVP 216
Query: 157 -----HMNHHPHPHPQQQQ---PQQPPPQHMMYAQQPPPQHHQVVVNHQQTPPNQPPSQP 208
H NHH QQQ P PPQ MM+ Q PPQ HQ P Q
Sbjct: 217 DVTEVHQNHHNMGMYQQQSGVPPVGAPPQGMMHQGQGPPQMHQ-------GHPGQ----- 264
Query: 209 PNQPPNQQPNNTSASLPSPLYPWMRSQF----ERKRGRQTYTRYQTLELEKEFHFNRYLT 264
+ PP+Q PN+ S+ +PSPLYPWMRSQF ERKRGRQTYTRYQTLELEKEFHFNRYLT
Sbjct: 265 -HTPPSQNPNSQSSGMPSPLYPWMRSQFGKCQERKRGRQTYTRYQTLELEKEFHFNRYLT 323
Query: 265 RRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSKD--GGSDAGSDITPATSPQ 317
RRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK+K G G +ITP SPQ
Sbjct: 324 RRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTKGEPGSGGEGDEITPPNSPQ 378
>gi|45553281|ref|NP_996167.1| antennapedia, isoform J [Drosophila melanogaster]
gi|45553283|ref|NP_996168.1| antennapedia, isoform I [Drosophila melanogaster]
gi|45553287|ref|NP_996170.1| antennapedia, isoform L [Drosophila melanogaster]
gi|45553297|ref|NP_996175.1| antennapedia, isoform M [Drosophila melanogaster]
gi|123317|sp|P02833.1|ANTP_DROME RecName: Full=Homeotic protein antennapedia
gi|156947|gb|AAA28376.1| Antennapedia differentiation protein [Drosophila melanogaster]
gi|156949|gb|AAA70214.1| antennapedia protein [Drosophila melanogaster]
gi|156951|gb|AAA70216.1| antennapedia protein [Drosophila melanogaster]
gi|1805742|emb|CAA27417.1| antennapedia protein [Drosophila melanogaster]
gi|4389423|gb|AAD19793.1| homeodomain protein [Drosophila melanogaster]
gi|45446391|gb|AAS65111.1| antennapedia, isoform I [Drosophila melanogaster]
gi|45446392|gb|AAS65112.1| antennapedia, isoform J [Drosophila melanogaster]
gi|45446393|gb|AAS65113.1| antennapedia, isoform L [Drosophila melanogaster]
gi|45446394|gb|AAS65114.1| antennapedia, isoform M [Drosophila melanogaster]
gi|224976|prf||1205216A gene Antp
Length = 378
Score = 208 bits (529), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 133/235 (56%), Positives = 145/235 (61%), Gaps = 51/235 (21%)
Query: 119 YASCKLQAAVGN-GIIPGPESPNDLVDPTLNNHH--------HHQHH------------- 156
YASCKLQAAVG G++P SP LVD ++ HH HH H
Sbjct: 159 YASCKLQAAVGGLGMVPEGGSP-PLVD-QMSGHHMNAQMTLPHHMGHPQAQLGYTDVGVP 216
Query: 157 -----HMNHHPHPHPQQQQ---PQQPPPQHMMYAQQPPPQHHQVVVNHQQTPPNQPPSQP 208
H NHH QQQ P PPQ MM+ Q PPQ HQ P Q
Sbjct: 217 DVTEVHQNHHNMGMYQQQSGVPPVGAPPQGMMHQGQGPPQMHQ-------GHPGQ----- 264
Query: 209 PNQPPNQQPNNTSASLPSPLYPWMRSQF----ERKRGRQTYTRYQTLELEKEFHFNRYLT 264
+ PP+Q PN+ S+ +PSPLYPWMRSQF ERKRGRQTYTRYQTLELEKEFHFNRYLT
Sbjct: 265 -HTPPSQNPNSQSSGMPSPLYPWMRSQFGKCQERKRGRQTYTRYQTLELEKEFHFNRYLT 323
Query: 265 RRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSKD--GGSDAGSDITPATSPQ 317
RRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK+K G G +ITP SPQ
Sbjct: 324 RRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTKGEPGSGGEGDEITPPNSPQ 378
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 52/109 (47%), Gaps = 35/109 (32%)
Query: 1 MSSYFANSYMPDIKNGGVLPPEHHQQHHYGATVLPQNNGVEDPSMYDPRQVHHYGQVPNN 60
M+SYF NSYM + H H+ G NGV D D +Q+HHY Q N+
Sbjct: 11 MTSYFTNSYMG---------ADMHHGHYPG-------NGVTD---LDAQQMHHYSQNANH 51
Query: 61 GQPVHGMPYPRFPPYDRMDIRNAAYYGAHEGGMEQ------YPRPDSPS 103
MPYPRFPPYDRM N GM+Q Y RPDSPS
Sbjct: 52 ---QGNMPYPRFPPYDRMPYYNGQ-------GMDQQQQHQVYSRPDSPS 90
>gi|170070071|ref|XP_001869455.1| homeotic antennapedia protein [Culex quinquefasciatus]
gi|167865904|gb|EDS29287.1| homeotic antennapedia protein [Culex quinquefasciatus]
Length = 361
Score = 200 bits (508), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 125/214 (58%), Positives = 133/214 (62%), Gaps = 25/214 (11%)
Query: 117 VVYASCKLQAAVGNGIIPGPESPNDLVDPTLNNHH---HHQHHHMN-------HHPHPHP 166
+VYASCKLQAAVGNG PN L N HHMN H H
Sbjct: 158 IVYASCKLQAAVGNG-------PNGLGTYGAENGSPPLEQMGHHMNTAQMTIPQHHMGHA 210
Query: 167 QQQQPQQPPPQHM-MYAQQPPPQHHQVVVNHQQTPPNQPPSQPPNQ--PPNQQPNNTSAS 223
Q Q Q P QHM MY V QPP Q PPN Q N+++
Sbjct: 211 QGQVHQNP--QHMGMYTNTGGGPPGVVPQQPPNMMHQQPPQLHQGQQPPPNSQ--NSNSG 266
Query: 224 LPSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIK 283
L SPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIK
Sbjct: 267 LQSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIK 326
Query: 284 IWFQNRRMKWKKENKSK-DGGSDAGSDITPATSP 316
IWFQNRRMKWKKENK+K + GS +D+TP SP
Sbjct: 327 IWFQNRRMKWKKENKTKGEPGSGDENDMTPPQSP 360
>gi|383209610|emb|CCE45703.1| antennapedia [Parasteatoda tepidariorum]
Length = 327
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 145/315 (46%), Positives = 169/315 (53%), Gaps = 40/315 (12%)
Query: 1 MSSYFA--NSYMPDIKNGGVLPPEHHQQHHYGATVLPQNNGVEDPSMYDPRQVHHYGQVP 58
M+SY+ Y+ DI+NGG + QQ HY +++ D RQ Y Q
Sbjct: 11 MTSYYNAPGPYLTDIRNGG-----NDQQQHYNPP------SIQNGDSCDQRQ---YMQPQ 56
Query: 59 NNGQPVHGMPYPRFPPYDRMDIR-NAAYYGAHEGGMEQYPRPDSPSMGHMGPQNGHQTP- 116
PV G YPRFPPYDR++IR A+ + Y S S G+M PQ HQTP
Sbjct: 57 YASSPVQGATYPRFPPYDRLEIRPITAHSDDSQSPPGHYYTQCSQSQGNM-PQPAHQTPQ 115
Query: 117 ---VVYASCKL-QAAVGNGIIPGPESPNDLVDPTLNNHHHHQHHHMNHHPHPHPQQQQPQ 172
+ + + + Q V P +V ++ Q + QQ Q
Sbjct: 116 HTPLTHPNAYVPQDGVQQNCRGSPTEAQSMVPQQFSSCKLQQQPN---------QQVMMQ 166
Query: 173 QPPPQHM-----MYAQQPPPQHHQVVVN--HQQTPPNQPPSQPPNQPPNQQPNNTSASLP 225
P H A PQH Q V+ Q PPN QPPN P N ++ P
Sbjct: 167 DPNGVHRPVNPDCAANNMHPQHCQSPVHSPQQMYPPNHVQQQPPN-PQNVNQVQPASGGP 225
Query: 226 SPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIW 285
SPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAH LCLTERQIKIW
Sbjct: 226 SPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHTLCLTERQIKIW 285
Query: 286 FQNRRMKWKKENKSK 300
FQNRRMKWKKENKSK
Sbjct: 286 FQNRRMKWKKENKSK 300
>gi|291461542|dbj|BAI83405.1| antennapedia 2 [Parasteatoda tepidariorum]
Length = 327
Score = 190 bits (482), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 147/334 (44%), Positives = 167/334 (50%), Gaps = 78/334 (23%)
Query: 1 MSSYFA--NSYMPDIKNGGVLPPEHHQQHHYGATVLPQNNGVEDPSMYDPRQVHHYGQVP 58
M+SY+ Y+ DI+NGG + QQ HY +++ D RQ Y Q
Sbjct: 11 MTSYYNAPGPYLTDIRNGG-----NDQQQHYNPP------SIQNGDSCDQRQ---YMQPQ 56
Query: 59 NNGQPVHGMPYPRFPPYDRMDIR-NAAYYGAHEGGMEQYPRPDSPSMGHMGPQNGHQTPV 117
PV G YPRFPPYDR++IR A+ + Y S S G+M PQ HQTP
Sbjct: 57 YASSPVQGATYPRFPPYDRLEIRPITAHSDDSQSPPGHYYTQCSQSQGNM-PQPAHQTPQ 115
Query: 118 ---------------VYASCKLQAAVGNGIIPGPESPNDLVDPTLNNHHHHQHHHMNHHP 162
V +C+ ++P S L
Sbjct: 116 HTPLTHPNAYVPQDGVQQNCRGSPTEAQSMVPQQFSSCKL-------------------- 155
Query: 163 HPHPQQQQPQQPPPQHMM--------------YAQQPPPQHHQVVVN--HQQTPPNQPPS 206
QQQP Q Q MM A PQH Q V+ Q PPN
Sbjct: 156 -----QQQPNQ---QVMMQDPNGVHRPVNPDCAANNMHPQHCQSPVHSPQQMYPPNHVQQ 207
Query: 207 QPPNQPPNQQPNNTSASLPSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRR 266
QPPN P N ++ PSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRR
Sbjct: 208 QPPN-PQNVNQVQPASGGPSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRR 266
Query: 267 RRIEIAHALCLTERQIKIWFQNRRMKWKKENKSK 300
RRIEIAH LCLTERQ KIWFQNRRMKWKKENKSK
Sbjct: 267 RRIEIAHTLCLTERQTKIWFQNRRMKWKKENKSK 300
>gi|193620095|ref|XP_001947187.1| PREDICTED: homeotic protein antennapedia-like isoform 1
[Acyrthosiphon pisum]
Length = 389
Score = 190 bits (482), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 110/137 (80%), Positives = 113/137 (82%), Gaps = 10/137 (7%)
Query: 185 PPPQHH-QVVVN-HQQTPPNQPPSQPPNQPPNQQPNNTSASLPSPLYPWMRSQFERKRGR 242
P P HH QVVVN HQQTPP Q P+ NQQ N + SLPSPLYPWMRSQFERKRGR
Sbjct: 259 PAPGHHNQVVVNPHQQTPPLQTPTAQ-----NQQAVNNN-SLPSPLYPWMRSQFERKRGR 312
Query: 243 QTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSK-- 300
QTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK+K
Sbjct: 313 QTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTKGG 372
Query: 301 DGGSDAGSDITPATSPQ 317
DG GSDITP TSPQ
Sbjct: 373 DGQGGDGSDITPQTSPQ 389
>gi|1098678|gb|AAB03236.1| homeotic protein [Schistocerca americana]
Length = 331
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 93/109 (85%), Positives = 95/109 (87%), Gaps = 8/109 (7%)
Query: 214 NQQPNNTSASLPSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAH 273
N P NT LPSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAH
Sbjct: 226 NGSPANT---LPSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAH 282
Query: 274 ALCLTERQIKIWFQNRRMKWKKENKSK-----DGGSDAGSDITPATSPQ 317
ALCLTERQIKIWFQNRRMKWKKENKSK +G +AGSDITP TSPQ
Sbjct: 283 ALCLTERQIKIWFQNRRMKWKKENKSKPDAGQNGDGNAGSDITPQTSPQ 331
>gi|195038411|ref|XP_001990653.1| GH19475 [Drosophila grimshawi]
gi|193894849|gb|EDV93715.1| GH19475 [Drosophila grimshawi]
Length = 385
Score = 187 bits (475), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 130/234 (55%), Positives = 144/234 (61%), Gaps = 50/234 (21%)
Query: 119 YASCKLQAAVGN-GIIPGPESPNDLVDPTLNNHH--------HHQHH------------- 156
YASCKLQAAVG+ G++ SP LVD + HH HH H
Sbjct: 167 YASCKLQAAVGSLGMVQEGGSP-PLVD-QMGGHHMNAQMTLPHHMGHPQAQLGYTDVGVP 224
Query: 157 -----HMNHHPHPHPQQQQPQQPP---PQHMMY---AQQPPPQHHQVVVNHQQTPPNQPP 205
H NHH QQQ PP PQ M A Q PPQ ++ H P
Sbjct: 225 DVTEVHQNHHNMGMYGQQQTGVPPVVAPQQAMMHPGAGQGPPQ---MLQGH--------P 273
Query: 206 SQPPNQPPNQQPNNTSASLPSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTR 265
Q + PP+Q P++ S+ +PSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTR
Sbjct: 274 GQ--HTPPSQNPSSQSSGMPSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTR 331
Query: 266 RRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSKD--GGSDAGSDITPATSPQ 317
RRRIEIAHALCLTERQIKIWFQNRRMKWKKENK+K G G +ITP SPQ
Sbjct: 332 RRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTKGEPGSGGEGDEITPPNSPQ 385
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 50/103 (48%), Gaps = 22/103 (21%)
Query: 1 MSSYFANSYMPDIKNGGVLPPEHHQQHHYGATVLPQNNGVEDPSMYDPRQVHHYGQVPNN 60
M+SYF NSYM + H H+ G NGV D D +Q+HHY Q PN
Sbjct: 11 MTSYFTNSYMG---------ADMHHGHYPG-------NGVTD---LDAQQMHHYSQNPNQ 51
Query: 61 GQPVHGMPYPRFPPYDRMDIRNAAYYGAHEGGMEQYPRPDSPS 103
MPYPRFPPYDRM N + + Y RPDSPS
Sbjct: 52 ---QGNMPYPRFPPYDRMPYYNGQGMDQQQQQHQGYSRPDSPS 91
>gi|332024150|gb|EGI64366.1| Homeotic protein antennapedia [Acromyrmex echinatior]
Length = 352
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 86/100 (86%), Positives = 92/100 (92%), Gaps = 2/100 (2%)
Query: 220 TSASLPSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
+SA+LPSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE
Sbjct: 252 SSANLPSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 311
Query: 280 RQIKIWFQNRRMKWKKENKSKD--GGSDAGSDITPATSPQ 317
RQIKIWFQNRRMKWKKENK+K G D ++I+P TSPQ
Sbjct: 312 RQIKIWFQNRRMKWKKENKTKGEPGSGDGDTEISPQTSPQ 351
>gi|383849605|ref|XP_003700435.1| PREDICTED: homeotic protein antennapedia-like [Megachile rotundata]
Length = 352
Score = 184 bits (467), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 86/100 (86%), Positives = 91/100 (91%), Gaps = 2/100 (2%)
Query: 220 TSASLPSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
SA+LPSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE
Sbjct: 252 ASANLPSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 311
Query: 280 RQIKIWFQNRRMKWKKENKSKD--GGSDAGSDITPATSPQ 317
RQIKIWFQNRRMKWKKENK+K G D ++I+P TSPQ
Sbjct: 312 RQIKIWFQNRRMKWKKENKTKGEPGSGDGDTEISPQTSPQ 351
>gi|328706300|ref|XP_003243055.1| PREDICTED: homeotic protein antennapedia-like isoform 2
[Acyrthosiphon pisum]
Length = 393
Score = 184 bits (467), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 110/141 (78%), Positives = 113/141 (80%), Gaps = 14/141 (9%)
Query: 185 PPPQHH-QVVVN-HQQTPPNQPPSQPPNQPPNQQPNNTSASLPSPLYPWMRSQF----ER 238
P P HH QVVVN HQQTPP Q P+ NQQ N + SLPSPLYPWMRSQF ER
Sbjct: 259 PAPGHHNQVVVNPHQQTPPLQTPTAQ-----NQQAVNNN-SLPSPLYPWMRSQFGPDSER 312
Query: 239 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK
Sbjct: 313 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 372
Query: 299 SK--DGGSDAGSDITPATSPQ 317
+K DG GSDITP TSPQ
Sbjct: 373 TKGGDGQGGDGSDITPQTSPQ 393
>gi|312384141|gb|EFR28940.1| hypothetical protein AND_02489 [Anopheles darlingi]
Length = 322
Score = 184 bits (466), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 151/356 (42%), Positives = 178/356 (50%), Gaps = 85/356 (23%)
Query: 1 MSSYFANSYMPDIKNGGVLPPEHHQQHHYGATVLPQNNGVEDPS-MYDPRQVHHYGQVPN 59
M+SYF NSYM +G HY T + +G++ MY H Q
Sbjct: 11 MTSYFTNSYMNSDMHG-----------HYPGTGV---DGLDTSQQMYSHHNQTHANQA-- 54
Query: 60 NGQPVHGMPYPRFPPYDRMDIRNAAYYGAHEGGME--QYPRPDSPSM---GHMGPQ-NGH 113
P PYPRFPPYDRM G ++ M+ Y R DSPS G + PQ NG+
Sbjct: 55 -NMP----PYPRFPPYDRM--------GYYQQTMDPAGYARADSPSSQVGGVIPPQTNGN 101
Query: 114 QTP-----------VVYASCKLQAAVGNGIIPGPESPNDLV-------DPTLNNHHHHQ- 154
+VYASCKLQAAVGNG PN L P L HH
Sbjct: 102 PLQQTQVQPQQQQPIVYASCKLQAAVGNG-------PNGLATYGAENGSPPLEQMGHHMS 154
Query: 155 -------HHHMNHHPHPHPQQQQPQQPPPQHMMYAQQPPPQHH-QVVVNHQQTPPNQPPS 206
HHM H Q Q ++ + QP P+ + Q+ + S
Sbjct: 155 TAQMTIPQHHMGH-----AQGQSSDTSASSKVLKSHQPNPKMKPNIGAVSVQSEADDCCS 209
Query: 207 QPPNQPPNQQPNNTSASLPSPLYPWMRS--QF---ERKRGRQTYTRYQTLELEKEFHFNR 261
+ P+ + SP Y MR+ F ERKRGRQTYTRYQTLELEKEFHFNR
Sbjct: 210 RCPSTIGGFE----DLEGRSPRYALMRNPRLFFPAERKRGRQTYTRYQTLELEKEFHFNR 265
Query: 262 YLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSK-DGGSDAGSDITPATSP 316
YLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK+K + GS +D+TP SP
Sbjct: 266 YLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTKGEPGSGDENDMTPPQSP 321
>gi|307178555|gb|EFN67244.1| Homeotic protein antennapedia [Camponotus floridanus]
Length = 353
Score = 183 bits (465), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 85/100 (85%), Positives = 91/100 (91%), Gaps = 2/100 (2%)
Query: 220 TSASLPSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
S++LPSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE
Sbjct: 253 ASSNLPSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 312
Query: 280 RQIKIWFQNRRMKWKKENKSKD--GGSDAGSDITPATSPQ 317
RQIKIWFQNRRMKWKKENK+K G D ++I+P TSPQ
Sbjct: 313 RQIKIWFQNRRMKWKKENKTKGEPGSGDGDTEISPQTSPQ 352
>gi|340727738|ref|XP_003402194.1| PREDICTED: homeotic protein antennapedia [Bombus terrestris]
gi|325305997|gb|ADZ11103.1| antennapedia-like protein [Bombus terrestris]
Length = 352
Score = 181 bits (458), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 84/96 (87%), Positives = 88/96 (91%), Gaps = 2/96 (2%)
Query: 224 LPSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIK 283
LPSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIK
Sbjct: 256 LPSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIK 315
Query: 284 IWFQNRRMKWKKENKSKD--GGSDAGSDITPATSPQ 317
IWFQNRRMKWKKENK+K G D ++I+P TSPQ
Sbjct: 316 IWFQNRRMKWKKENKTKGEPGSGDGDTEISPQTSPQ 351
>gi|380014422|ref|XP_003691231.1| PREDICTED: homeotic protein antennapedia-like [Apis florea]
Length = 350
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 84/96 (87%), Positives = 88/96 (91%), Gaps = 2/96 (2%)
Query: 224 LPSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIK 283
LPSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFH+NRYLTRRRRIEIAHALCLTERQIK
Sbjct: 254 LPSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIK 313
Query: 284 IWFQNRRMKWKKENKSKD--GGSDAGSDITPATSPQ 317
IWFQNRRMKWKKENKSK G D ++I+P TSPQ
Sbjct: 314 IWFQNRRMKWKKENKSKGTPGSGDGDTEISPQTSPQ 349
>gi|266457590|ref|NP_001161164.1| antennapedia-like protein [Nasonia vitripennis]
gi|254047496|gb|ACT63883.1| Antennapedia-like protein [Nasonia vitripennis]
Length = 362
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 88/113 (77%), Positives = 92/113 (81%), Gaps = 6/113 (5%)
Query: 207 QPPNQPPNQQPNNTSASLPSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRR 266
Q P P + P N LPSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRR
Sbjct: 253 QQPGTPQSAAPTN----LPSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRR 308
Query: 267 RRIEIAHALCLTERQIKIWFQNRRMKWKKENKSKD--GGSDAGSDITPATSPQ 317
RRIEIAHALCLTERQIKIWFQNRRMKWKKE K+K D +DI+P TSPQ
Sbjct: 309 RRIEIAHALCLTERQIKIWFQNRRMKWKKETKTKGEPNSGDGDTDISPQTSPQ 361
>gi|350405515|ref|XP_003487458.1| PREDICTED: homeotic protein antennapedia-like [Bombus impatiens]
Length = 351
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 84/95 (88%), Positives = 88/95 (92%), Gaps = 1/95 (1%)
Query: 224 LPSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIK 283
LPSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIK
Sbjct: 256 LPSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIK 315
Query: 284 IWFQNRRMKWKKENKSKDGGS-DAGSDITPATSPQ 317
IWFQNRRMKWKKENK + GS D ++I+P TSPQ
Sbjct: 316 IWFQNRRMKWKKENKXGEPGSGDGDTEISPQTSPQ 350
>gi|347972374|ref|XP_003436885.1| AGAP004660-PB [Anopheles gambiae str. PEST]
gi|333467595|gb|EGK96613.1| AGAP004660-PB [Anopheles gambiae str. PEST]
Length = 140
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 96/138 (69%), Positives = 101/138 (73%), Gaps = 20/138 (14%)
Query: 180 MYAQQPPPQHHQVVVNHQQTPPNQPPSQPPNQPPNQQPNNTSASLPSPLYPWMRSQFERK 239
M QQPPP H QQ PPN N S+ L SPLYPWMRSQFERK
Sbjct: 21 MMHQQPPPLHQ-----GQQAPPNS--------------QNASSGLQSPLYPWMRSQFERK 61
Query: 240 RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKS 299
RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK+
Sbjct: 62 RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKT 121
Query: 300 K-DGGSDAGSDITPATSP 316
K + GS +D+TP SP
Sbjct: 122 KGEPGSGDENDMTPPQSP 139
>gi|3445430|emb|CAA07499.1| homeobox protein [Cupiennius salei]
Length = 172
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 94/129 (72%), Positives = 102/129 (79%), Gaps = 6/129 (4%)
Query: 187 PQHHQVVVN--HQQTPPNQPPSQPPNQPPNQQPNNTSASLPSPLYPWMRSQFERKRGRQT 244
PQH Q V+ Q PPN P QPPNQ NQ + + PSPLYPWMRSQFERKRGRQT
Sbjct: 35 PQHCQSPVHSPQQMYPPNHVPQQPPNQNVNQV--QSPSGGPSPLYPWMRSQFERKRGRQT 92
Query: 245 YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSKD--G 302
YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK+K+
Sbjct: 93 YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKAKEPAA 152
Query: 303 GSDAGSDIT 311
G G+++
Sbjct: 153 GFIMGTELV 161
>gi|405109808|emb|CCH51006.1| antennapedia, partial [Phalangium opilio]
Length = 206
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 84/97 (86%), Positives = 87/97 (89%), Gaps = 3/97 (3%)
Query: 213 PNQQPNNTSASLPSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIA 272
P Q PN S SLPSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIA
Sbjct: 102 PAQTPN--SGSLPSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIA 159
Query: 273 HALCLTERQIKIWFQNRRMKWKKENKSK-DGGSDAGS 308
HALCLTERQIKIWFQNRRMKWKKENK+K + G G+
Sbjct: 160 HALCLTERQIKIWFQNRRMKWKKENKAKLEAGLAMGA 196
>gi|309253977|gb|ADO60877.1| antennapedia [Bicyclus anynana]
Length = 150
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 79/82 (96%), Positives = 82/82 (100%)
Query: 219 NTSASLPSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
NT+ASLPSPLYPW+RSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT
Sbjct: 68 NTNASLPSPLYPWIRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 127
Query: 279 ERQIKIWFQNRRMKWKKENKSK 300
ERQIKIWFQNRRMKWKKENK+K
Sbjct: 128 ERQIKIWFQNRRMKWKKENKTK 149
>gi|88604720|gb|ABD46731.1| homeobox protein antennapedia [Endeis spinosa]
Length = 203
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 94/164 (57%), Positives = 103/164 (62%), Gaps = 4/164 (2%)
Query: 142 LVDPTLNNHHHHQHHHMNHHPHPHPQQQQPQQPPPQHMMYAQQPPPQHHQVVVNHQQTPP 201
+ D N ++ H + NHH + + QQ PQ + +
Sbjct: 33 MADQNCRNSPNNLHQNSNHHQYSSCKLQQNTTTGTSPTGGV--ATPQSPSALASGGLGGA 90
Query: 202 NQPPS--QPPNQPPNQQPNNTSASLPSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHF 259
N PPS P + Q S LPSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHF
Sbjct: 91 NVPPSPVHSPQMYNHHQSITNSGVLPSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHF 150
Query: 260 NRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSKDGG 303
NRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK K G
Sbjct: 151 NRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKPKTEG 194
>gi|259053109|emb|CAX11341.1| antennapedia [Parasteatoda tepidariorum]
Length = 195
Score = 170 bits (431), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 90/116 (77%), Positives = 93/116 (80%), Gaps = 3/116 (2%)
Query: 187 PQHHQVVVN--HQQTPPNQPPSQPPNQPPNQQPNNTSASLPSPLYPWMRSQFERKRGRQT 244
PQH Q V+ Q PPN QPPN P N ++ PSPLYPWMRSQFERKRGRQT
Sbjct: 81 PQHCQSPVHSPQQMYPPNHVQQQPPN-PQNVNQVQPASGGPSPLYPWMRSQFERKRGRQT 139
Query: 245 YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSK 300
YTRYQTLELEKEFHFNRYLTRRRRIEIAH LCLTERQIKIWFQNRRMKWKKENKSK
Sbjct: 140 YTRYQTLELEKEFHFNRYLTRRRRIEIAHTLCLTERQIKIWFQNRRMKWKKENKSK 195
>gi|88604722|gb|ABD46732.1| homeobox protein antennapedia [Nymphon gracile]
Length = 129
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 79/89 (88%), Positives = 81/89 (91%)
Query: 215 QQPNNTSASLPSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHA 274
Q N++ LPSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHA
Sbjct: 32 QSITNSAGVLPSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHA 91
Query: 275 LCLTERQIKIWFQNRRMKWKKENKSKDGG 303
LCLTERQIKIWFQNRRMKWKKENK K G
Sbjct: 92 LCLTERQIKIWFQNRRMKWKKENKPKTEG 120
>gi|109944950|dbj|BAE97005.1| Antennapedia [Procambarus clarkii]
Length = 333
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 82/99 (82%), Positives = 87/99 (87%), Gaps = 1/99 (1%)
Query: 219 NTSASLPSPLYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 277
N S++LPSPLYPWMRSQF ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL
Sbjct: 233 NASSALPSPLYPWMRSQFAERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 292
Query: 278 TERQIKIWFQNRRMKWKKENKSKDGGSDAGSDITPATSP 316
TERQIKIWFQ+RRMKWKKENKSK + S+ TSP
Sbjct: 293 TERQIKIWFQDRRMKWKKENKSKVENGNPLSETPTPTSP 331
>gi|321475842|gb|EFX86804.1| putative homeotic Antennapedia protein [Daphnia pulex]
Length = 657
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 76/84 (90%), Positives = 78/84 (92%), Gaps = 2/84 (2%)
Query: 226 SPLYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKI 284
SPLYPWMRSQF ERKRGRQTYTR+QTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKI
Sbjct: 563 SPLYPWMRSQFAERKRGRQTYTRFQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKI 622
Query: 285 WFQNRRMKWKKENKSK-DGGSDAG 307
WFQNRRMKWKKENK+K D G G
Sbjct: 623 WFQNRRMKWKKENKAKLDAGCLEG 646
>gi|15425738|dbj|BAB64346.1| homeotic protein [Daphnia magna]
gi|109944917|dbj|BAE96985.1| Antennapedia [Daphnia magna]
gi|109944921|dbj|BAE96987.1| Antennapedia [Daphnia magna]
gi|109944923|dbj|BAE96988.1| Antennapedia [Daphnia magna]
gi|109944925|dbj|BAE96989.1| Antennapedia [Daphnia magna]
gi|109944928|dbj|BAE96991.1| Antennapedia [Daphnia magna]
gi|109944931|dbj|BAE96993.1| Antennapedia [Daphnia magna]
Length = 627
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 76/84 (90%), Positives = 78/84 (92%), Gaps = 2/84 (2%)
Query: 226 SPLYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKI 284
SPLYPWMRSQF ERKRGRQTYTR+QTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKI
Sbjct: 533 SPLYPWMRSQFAERKRGRQTYTRFQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKI 592
Query: 285 WFQNRRMKWKKENKSK-DGGSDAG 307
WFQNRRMKWKKENK+K D G G
Sbjct: 593 WFQNRRMKWKKENKAKLDAGCLEG 616
>gi|21389049|gb|AAM50459.1|AF393443_1 antennapedia [Sacculina carcini]
Length = 369
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 101/197 (51%), Positives = 113/197 (57%), Gaps = 31/197 (15%)
Query: 146 TLNNHHHHQHHHMNHHPHPHPQQQQPQQPPPQHMMYAQQPPPQHHQVVVN---------H 196
T+ +H HHQ HPH Q Q Q Q Y + N +
Sbjct: 175 TVQHHGHHQM----THPHLQHQTLQHPQQQQQQQRYMSACKMHDAMAMSNGAVALSDAVY 230
Query: 197 QQTPPNQP-----------------PSQPPNQPPNQQPNNTSASLPSPLYPWMRSQFERK 239
QTP P S P QQP + + S P+ L+PWMR+QF+RK
Sbjct: 231 MQTPCEAPDMIGAAGQTAVMYGGQATSAPGVLNAQQQPPSQAGS-PNVLFPWMRTQFDRK 289
Query: 240 RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKS 299
RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK+
Sbjct: 290 RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKA 349
Query: 300 KDGGSDAGSDITPATSP 316
KDG +GS TSP
Sbjct: 350 KDGSVKSGSRSENETSP 366
>gi|109944934|dbj|BAE96995.1| Antennapedia [Moina macrocopa]
Length = 528
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 76/84 (90%), Positives = 78/84 (92%), Gaps = 2/84 (2%)
Query: 226 SPLYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKI 284
SPLYPWMRSQF ERKRGRQTYTR+QTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKI
Sbjct: 434 SPLYPWMRSQFAERKRGRQTYTRFQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKI 493
Query: 285 WFQNRRMKWKKENKSK-DGGSDAG 307
WFQNRRMKWKKENK+K D G G
Sbjct: 494 WFQNRRMKWKKENKAKLDAGCLEG 517
>gi|109944936|dbj|BAE96996.1| Antennapedia [Artemia franciscana]
gi|109944941|dbj|BAE96999.1| Antennapedia [Artemia franciscana]
Length = 357
Score = 164 bits (415), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 75/83 (90%), Positives = 77/83 (92%), Gaps = 1/83 (1%)
Query: 226 SPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIW 285
S LYPWM+SQFERKRGRQTYTR+QTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIW
Sbjct: 257 SNLYPWMKSQFERKRGRQTYTRFQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIW 316
Query: 286 FQNRRMKWKKENKSK-DGGSDAG 307
FQNRRMKWKKENKSK D G G
Sbjct: 317 FQNRRMKWKKENKSKVDSGCLDG 339
>gi|18307792|gb|AAL67685.1|AF435786_1 antennapedia [Artemia franciscana]
gi|109944938|dbj|BAE96997.1| Antennapedia [Artemia franciscana]
gi|109944944|dbj|BAE97001.1| Antennapedia [Artemia franciscana]
Length = 348
Score = 164 bits (415), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 75/83 (90%), Positives = 77/83 (92%), Gaps = 1/83 (1%)
Query: 226 SPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIW 285
S LYPWM+SQFERKRGRQTYTR+QTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIW
Sbjct: 257 SNLYPWMKSQFERKRGRQTYTRFQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIW 316
Query: 286 FQNRRMKWKKENKSK-DGGSDAG 307
FQNRRMKWKKENKSK D G G
Sbjct: 317 FQNRRMKWKKENKSKVDSGCLDG 339
>gi|391347328|ref|XP_003747916.1| PREDICTED: homeotic protein antennapedia-like [Metaseiulus
occidentalis]
Length = 263
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 74/92 (80%), Positives = 80/92 (86%)
Query: 209 PNQPPNQQPNNTSASLPSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRR 268
P QP + + S+ S LYPWMRSQFERKRGRQTYTR+QTLELEKEF FNRYLTRRRR
Sbjct: 159 PQQPEDCNSDQGSSKDCSLLYPWMRSQFERKRGRQTYTRFQTLELEKEFRFNRYLTRRRR 218
Query: 269 IEIAHALCLTERQIKIWFQNRRMKWKKENKSK 300
IEIAHALCLTERQIKIWFQNRRMKWKKE+K+K
Sbjct: 219 IEIAHALCLTERQIKIWFQNRRMKWKKESKTK 250
>gi|217035833|gb|ACJ74388.1| Hox7 [Branchiostoma lanceolatum]
Length = 236
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 79/125 (63%), Positives = 85/125 (68%), Gaps = 4/125 (3%)
Query: 175 PPQHMMYAQQPPPQHHQVVVNHQQTPPNQPPSQPPNQPPNQQPNNTSASLPSPLYPWMRS 234
PPQ M + Q V P P Q P +A + +P+YPWMRS
Sbjct: 97 PPQSMSAMHGAACSYQQAEVRKDMAGVGGHPGHPVQQA---NPALNTAQMTTPIYPWMRS 153
Query: 235 QF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKW 293
ERKRGRQTYTRYQTLELEKEFHFN+YLTRRRRIEIAHALCLTERQIKIWFQNRRMKW
Sbjct: 154 TAPERKRGRQTYTRYQTLELEKEFHFNKYLTRRRRIEIAHALCLTERQIKIWFQNRRMKW 213
Query: 294 KKENK 298
KKENK
Sbjct: 214 KKENK 218
>gi|306965454|emb|CBK55568.1| antennapedia [Glomeris marginata]
Length = 201
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 75/89 (84%), Positives = 79/89 (88%), Gaps = 6/89 (6%)
Query: 221 SASLPSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTER 280
+ SL SPLYPWMR +RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTER
Sbjct: 110 AGSLGSPLYPWMR---KRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTER 166
Query: 281 QIKIWFQNRRMKWKKENKSKDGGSDAGSD 309
QIKIWFQNRRMKWKKENK+K +AG D
Sbjct: 167 QIKIWFQNRRMKWKKENKAKI---EAGVD 192
>gi|397911070|gb|AFO68811.1| homeodomain-containing protein Hox7, partial [Branchiostoma
lanceolatum]
Length = 222
Score = 157 bits (396), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 79/125 (63%), Positives = 85/125 (68%), Gaps = 4/125 (3%)
Query: 175 PPQHMMYAQQPPPQHHQVVVNHQQTPPNQPPSQPPNQPPNQQPNNTSASLPSPLYPWMRS 234
PPQ M + Q V P P Q P +A + +P+YPWMRS
Sbjct: 89 PPQSMSAMHGAACSYQQAEVRKDMAGVGGHPGHPVQQA---NPALNTAQMTTPIYPWMRS 145
Query: 235 QF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKW 293
ERKRGRQTYTRYQTLELEKEFHFN+YLTRRRRIEIAHALCLTERQIKIWFQNRRMKW
Sbjct: 146 TAPERKRGRQTYTRYQTLELEKEFHFNKYLTRRRRIEIAHALCLTERQIKIWFQNRRMKW 205
Query: 294 KKENK 298
KKENK
Sbjct: 206 KKENK 210
>gi|151935663|gb|ABS18813.1| Hox6 [Flaccisagitta enflata]
Length = 145
Score = 156 bits (395), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 73/95 (76%), Positives = 80/95 (84%)
Query: 208 PPNQPPNQQPNNTSASLPSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRR 267
P Q P + S + +P+YPWMRSQF+RKRGRQTYTRYQTLELEKEFHFNRYLTRRR
Sbjct: 6 PGPQEGQAAPIDHSLNSQTPIYPWMRSQFDRKRGRQTYTRYQTLELEKEFHFNRYLTRRR 65
Query: 268 RIEIAHALCLTERQIKIWFQNRRMKWKKENKSKDG 302
RI+IAHALCLTERQIKIWFQNRRMKWKKE K+ G
Sbjct: 66 RIDIAHALCLTERQIKIWFQNRRMKWKKEQKAALG 100
>gi|160421814|gb|ABX39491.1| AmphiHox7 [Branchiostoma floridae]
Length = 236
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/125 (63%), Positives = 85/125 (68%), Gaps = 4/125 (3%)
Query: 175 PPQHMMYAQQPPPQHHQVVVNHQQTPPNQPPSQPPNQPPNQQPNNTSASLPSPLYPWMRS 234
PPQ M + Q V P P Q P +A + +P+YPWMRS
Sbjct: 97 PPQSMSAMHGAACSYQQAEVRKDMAGVGGHPGHPVQQA---NPALNTAQMTTPIYPWMRS 153
Query: 235 QF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKW 293
ERKRGRQTYTRYQTLELEKEFHFN+YLTRRRRIEIAHALCLTERQIKIWFQNRRMKW
Sbjct: 154 TAPERKRGRQTYTRYQTLELEKEFHFNKYLTRRRRIEIAHALCLTERQIKIWFQNRRMKW 213
Query: 294 KKENK 298
KKENK
Sbjct: 214 KKENK 218
>gi|332692487|gb|AEE90167.1| Homeobox B7a [Anguilla anguilla]
Length = 220
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 80/126 (63%), Positives = 87/126 (69%), Gaps = 9/126 (7%)
Query: 190 HQVVVNHQQTPPNQPPSQPPNQPPNQQPNNTSA--------SLPSPLYPWMRSQ-FERKR 240
H N +P ++ S P + PN A S +YPWMRS ERKR
Sbjct: 81 HASATNVHCSPFDRSLSAMSAGDPAKHPNCWRADQGDYHQESESFRIYPWMRSTGSERKR 140
Query: 241 GRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSK 300
GRQTYTRYQTLELEKEFHFNRYLTRRRR+EIAHALCLTERQIKIWFQNRRMKWKKENKS
Sbjct: 141 GRQTYTRYQTLELEKEFHFNRYLTRRRRVEIAHALCLTERQIKIWFQNRRMKWKKENKSA 200
Query: 301 DGGSDA 306
D S+A
Sbjct: 201 DQSSNA 206
>gi|385654478|gb|AFI61979.1| Hox-B7a [Anguilla japonica]
Length = 220
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/126 (63%), Positives = 87/126 (69%), Gaps = 9/126 (7%)
Query: 190 HQVVVNHQQTPPNQPPSQPPNQPPNQQPNNTSA--------SLPSPLYPWMRSQ-FERKR 240
H N +P ++ S P + PN A S +YPWMRS ERKR
Sbjct: 81 HASATNVHCSPFDRSLSAMSAGDPAKHPNCWRADQGDYHQESESFRIYPWMRSTGSERKR 140
Query: 241 GRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSK 300
GRQTYTRYQTLELEKEFHFNRYLTRRRR+EIAHALCLTERQIKIWFQNRRMKWKKENKS
Sbjct: 141 GRQTYTRYQTLELEKEFHFNRYLTRRRRVEIAHALCLTERQIKIWFQNRRMKWKKENKSA 200
Query: 301 DGGSDA 306
D S+A
Sbjct: 201 DQSSNA 206
>gi|322799546|gb|EFZ20854.1| hypothetical protein SINV_14513 [Solenopsis invicta]
Length = 180
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 71/83 (85%), Positives = 75/83 (90%), Gaps = 2/83 (2%)
Query: 237 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE
Sbjct: 1 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 60
Query: 297 NKSKD--GGSDAGSDITPATSPQ 317
NK+K G D ++I+P TSPQ
Sbjct: 61 NKTKGEPGSGDGDTEISPQTSPQ 83
>gi|410980865|ref|XP_003996794.1| PREDICTED: homeobox protein Hox-B7 [Felis catus]
Length = 217
Score = 154 bits (388), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 70/100 (70%), Positives = 79/100 (79%), Gaps = 1/100 (1%)
Query: 206 SQPPNQPPNQQPNNTSASLPSPLYPWMRSQ-FERKRGRQTYTRYQTLELEKEFHFNRYLT 264
S Q+ ++ +A +YPWMRS +RKRGRQTYTRYQTLELEKEFH+NRYLT
Sbjct: 104 SAKAAGAKEQRDSDLAAESNFRIYPWMRSSGTDRKRGRQTYTRYQTLELEKEFHYNRYLT 163
Query: 265 RRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSKDGGS 304
RRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK+ G+
Sbjct: 164 RRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTAGAGA 203
>gi|194217070|ref|XP_001918206.1| PREDICTED: homeobox protein Hox-B7-like [Equus caballus]
Length = 217
Score = 153 bits (387), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 73/107 (68%), Positives = 83/107 (77%), Gaps = 2/107 (1%)
Query: 206 SQPPNQPPNQQPNNTSASLPSPLYPWMRSQ-FERKRGRQTYTRYQTLELEKEFHFNRYLT 264
S Q+ ++ +A +YPWMRS +RKRGRQTYTRYQTLELEKEFH+NRYLT
Sbjct: 104 SAKAAGAKEQRDSDLAAETNFRIYPWMRSSGTDRKRGRQTYTRYQTLELEKEFHYNRYLT 163
Query: 265 RRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSKDGGSDAGSDIT 311
RRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK+ G+ +G D T
Sbjct: 164 RRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTAGLGA-SGQDKT 209
>gi|397911072|gb|AFO68812.1| homeodomain-containing protein Hox7, partial [Branchiostoma
lanceolatum]
Length = 127
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 77/107 (71%), Positives = 85/107 (79%), Gaps = 4/107 (3%)
Query: 213 PNQQPN--NTSASLPSPLYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRI 269
P QQ N +A + +P+YPWMRS ERKRGRQTYTRYQTLELEKEFHFN+YLTRRRRI
Sbjct: 21 PVQQANPALNTAQMTTPIYPWMRSTAPERKRGRQTYTRYQTLELEKEFHFNKYLTRRRRI 80
Query: 270 EIAHALCLTERQIKIWFQNRRMKWKKENKSKDGGSD-AGSDITPATS 315
EIAHALCLTERQIKIWFQNRRMKWKKENK + A S+ + TS
Sbjct: 81 EIAHALCLTERQIKIWFQNRRMKWKKENKLESLKQQPAESETSSTTS 127
>gi|169259788|ref|NP_001108563.1| homeobox protein Hox-B7a [Danio rerio]
gi|60392411|sp|Q8AWY9.1|HXB7A_DANRE RecName: Full=Homeobox protein Hox-B7a; Short=Hox-B7
gi|26984635|emb|CAD59112.1| SI:dZ254O17.2 (homeo box protein B7a) [Danio rerio]
gi|190338728|gb|AAI63357.1| Homeo box B7a [Danio rerio]
gi|190339800|gb|AAI63361.1| Homeo box B7a [Danio rerio]
Length = 227
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 70/84 (83%), Positives = 74/84 (88%), Gaps = 1/84 (1%)
Query: 228 LYPWMRSQ-FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWMRS +RKRGRQTY+RYQTLELEKEFHFNRYL+RRRRIEIAHALCLTERQIKIWF
Sbjct: 134 IYPWMRSTGADRKRGRQTYSRYQTLELEKEFHFNRYLSRRRRIEIAHALCLTERQIKIWF 193
Query: 287 QNRRMKWKKENKSKDGGSDAGSDI 310
QNRRMKWKKENKS D S A I
Sbjct: 194 QNRRMKWKKENKSTDRCSPAADQI 217
>gi|307213521|gb|EFN88930.1| Homeotic protein antennapedia [Harpegnathos saltator]
Length = 236
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 71/83 (85%), Positives = 75/83 (90%), Gaps = 2/83 (2%)
Query: 237 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE
Sbjct: 153 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 212
Query: 297 NKSKD--GGSDAGSDITPATSPQ 317
NK+K G D ++I+P TSPQ
Sbjct: 213 NKTKGEPGSGDGDTEISPQTSPQ 235
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/154 (48%), Positives = 86/154 (55%), Gaps = 32/154 (20%)
Query: 1 MSSYFANSYMPDIKNGGVLPPEHHQQHHYGATVLPQNNGVE------------DPSMY-D 47
MSSYFANSY+PD++NGGV P HQQ HYGA V DPS+
Sbjct: 1 MSSYFANSYIPDLRNGGVEHPHQHQQ-HYGAAVQVPQQTQSVQQQSQQTGDPCDPSLLRQ 59
Query: 48 PRQVHHYGQVPNNGQPVHGMPYPRFPPYDRMDIRNAAYY------GAHEGGMEQY--PRP 99
HHYG GQ MPYPRFPPY+R+D+RNAAYY G+ + GM Y P
Sbjct: 60 GVSTHHYGTA--GGQ--QDMPYPRFPPYNRIDMRNAAYYQHQQEHGSMD-GMASYRSTSP 114
Query: 100 DSPSMGHMGPQ---NGH--QTPVVYASCKLQAAV 128
+ SM HMG NGH TP+VYASCKLQAA
Sbjct: 115 STTSMAHMGHTSTPNGHPSSTPIVYASCKLQAAA 148
>gi|73966250|ref|XP_851221.1| PREDICTED: homeobox protein Hox-B7 [Canis lupus familiaris]
Length = 217
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 70/95 (73%), Positives = 77/95 (81%), Gaps = 1/95 (1%)
Query: 206 SQPPNQPPNQQPNNTSASLPSPLYPWMRSQ-FERKRGRQTYTRYQTLELEKEFHFNRYLT 264
S Q+ ++ +A +YPWMRS +RKRGRQTYTRYQTLELEKEFH+NRYLT
Sbjct: 104 SAKAAGAKEQRDSDLAAESNFRIYPWMRSSGTDRKRGRQTYTRYQTLELEKEFHYNRYLT 163
Query: 265 RRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKS 299
RRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKS
Sbjct: 164 RRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKS 198
>gi|426347608|ref|XP_004041441.1| PREDICTED: homeobox protein Hox-B7 [Gorilla gorilla gorilla]
gi|146324926|sp|A1YFA5.1|HXB7_GORGO RecName: Full=Homeobox protein Hox-B7
gi|120975055|gb|ABM46823.1| HOXB7 [Gorilla gorilla]
Length = 217
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 71/102 (69%), Positives = 80/102 (78%), Gaps = 1/102 (0%)
Query: 206 SQPPNQPPNQQPNNTSASLPSPLYPWMRSQ-FERKRGRQTYTRYQTLELEKEFHFNRYLT 264
S Q+ ++ +A +YPWMRS +RKRGRQTYTRYQTLELEKEFH+NRYLT
Sbjct: 104 SAKAAGAKEQRDSDLAAESNFRIYPWMRSSGTDRKRGRQTYTRYQTLELEKEFHYNRYLT 163
Query: 265 RRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSKDGGSDA 306
RRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK+ G+ A
Sbjct: 164 RRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTAGPGTTA 205
>gi|18026216|gb|AAL25809.1| antennapedia homeodomain protein [Euprymna scolopes]
Length = 93
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 73/92 (79%), Positives = 82/92 (89%), Gaps = 4/92 (4%)
Query: 219 NTSASLPSPLYPWMRSQF--ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALC 276
N++ +LP +YPWMRSQ+ RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALC
Sbjct: 1 NSATTLP--IYPWMRSQYGPHRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALC 58
Query: 277 LTERQIKIWFQNRRMKWKKENKSKDGGSDAGS 308
LTERQIKIWFQNRRMKWKKENK++ G++ G
Sbjct: 59 LTERQIKIWFQNRRMKWKKENKAEMPGTENGK 90
>gi|449277036|gb|EMC85343.1| Homeobox protein Hox-B7 [Columba livia]
Length = 217
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 68/80 (85%), Positives = 73/80 (91%), Gaps = 1/80 (1%)
Query: 228 LYPWMRSQ-FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWMRS +RKRGRQTYTRYQTLELEKEFH+NRYLTRRRRIEIAHALCLTERQIKIWF
Sbjct: 126 IYPWMRSTGTDRKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWF 185
Query: 287 QNRRMKWKKENKSKDGGSDA 306
QNRRMKWKKENK+ GS +
Sbjct: 186 QNRRMKWKKENKTACSGSSS 205
>gi|363743430|ref|XP_003642838.1| PREDICTED: homeobox protein Hox-B7 [Gallus gallus]
Length = 217
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 68/80 (85%), Positives = 73/80 (91%), Gaps = 1/80 (1%)
Query: 228 LYPWMRSQ-FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWMRS +RKRGRQTYTRYQTLELEKEFH+NRYLTRRRRIEIAHALCLTERQIKIWF
Sbjct: 126 IYPWMRSTGTDRKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWF 185
Query: 287 QNRRMKWKKENKSKDGGSDA 306
QNRRMKWKKENK+ GS +
Sbjct: 186 QNRRMKWKKENKTACSGSSS 205
>gi|426237815|ref|XP_004012853.1| PREDICTED: homeobox protein Hox-B7 [Ovis aries]
Length = 217
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 69/95 (72%), Positives = 77/95 (81%), Gaps = 1/95 (1%)
Query: 206 SQPPNQPPNQQPNNTSASLPSPLYPWMRSQ-FERKRGRQTYTRYQTLELEKEFHFNRYLT 264
S Q+ ++ +A +YPWMRS +RKRGRQTYTRYQTLELEKEFH+NRYLT
Sbjct: 104 SAKAAGAKEQRDSDLAAESNFRIYPWMRSSGTDRKRGRQTYTRYQTLELEKEFHYNRYLT 163
Query: 265 RRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKS 299
RRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK+
Sbjct: 164 RRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKT 198
>gi|296476456|tpg|DAA18571.1| TPA: homeobox protein Hox-B7 [Bos taurus]
gi|440910522|gb|ELR60316.1| Homeobox protein Hox-B7 [Bos grunniens mutus]
Length = 217
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 69/95 (72%), Positives = 77/95 (81%), Gaps = 1/95 (1%)
Query: 206 SQPPNQPPNQQPNNTSASLPSPLYPWMRSQ-FERKRGRQTYTRYQTLELEKEFHFNRYLT 264
S Q+ ++ +A +YPWMRS +RKRGRQTYTRYQTLELEKEFH+NRYLT
Sbjct: 104 SAKAAGAKEQRDSDLAAESNFRIYPWMRSSGTDRKRGRQTYTRYQTLELEKEFHYNRYLT 163
Query: 265 RRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKS 299
RRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK+
Sbjct: 164 RRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKT 198
>gi|301762934|ref|XP_002916869.1| PREDICTED: homeobox protein Hox-B7-like [Ailuropoda melanoleuca]
gi|281344383|gb|EFB19967.1| hypothetical protein PANDA_005014 [Ailuropoda melanoleuca]
Length = 217
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 69/95 (72%), Positives = 77/95 (81%), Gaps = 1/95 (1%)
Query: 206 SQPPNQPPNQQPNNTSASLPSPLYPWMRSQ-FERKRGRQTYTRYQTLELEKEFHFNRYLT 264
S Q+ ++ +A +YPWMRS +RKRGRQTYTRYQTLELEKEFH+NRYLT
Sbjct: 104 SAKAAGAKEQRDSDLAAESNFRIYPWMRSSGTDRKRGRQTYTRYQTLELEKEFHYNRYLT 163
Query: 265 RRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKS 299
RRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK+
Sbjct: 164 RRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKT 198
>gi|62945316|ref|NP_001017480.1| homeobox protein Hox-B7 [Rattus norvegicus]
gi|83303676|sp|P18864.2|HXB7_RAT RecName: Full=Homeobox protein Hox-B7; AltName: Full=Homeobox
protein R1B
gi|51259417|gb|AAH79340.1| Homeo box B7 [Rattus norvegicus]
gi|149053981|gb|EDM05798.1| homeobox protein [Rattus norvegicus]
Length = 219
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 69/86 (80%), Positives = 76/86 (88%), Gaps = 1/86 (1%)
Query: 215 QQPNNTSASLPSPLYPWMRSQ-FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAH 273
Q+ ++ +A +YPWMRS ERKRGRQTYTRYQTLELEKEFH+NRYLTRRRRIEIAH
Sbjct: 113 QRDSDLAAESNFRIYPWMRSSGTERKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAH 172
Query: 274 ALCLTERQIKIWFQNRRMKWKKENKS 299
ALCLTERQIKIWFQNRRMKWKKENK+
Sbjct: 173 ALCLTERQIKIWFQNRRMKWKKENKT 198
>gi|109944947|dbj|BAE97003.1| Antennapedia [Porcellio scaber]
Length = 258
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 69/74 (93%), Positives = 71/74 (95%)
Query: 219 NTSASLPSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
N+ + L SPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT
Sbjct: 184 NSQSGLSSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 243
Query: 279 ERQIKIWFQNRRMK 292
ERQIKIWFQNRRMK
Sbjct: 244 ERQIKIWFQNRRMK 257
>gi|385654490|gb|AFI61989.1| Hox-B7b [Anguilla japonica]
Length = 221
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 68/78 (87%), Positives = 72/78 (92%), Gaps = 1/78 (1%)
Query: 228 LYPWMRSQ-FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWMRS +RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+ERQIKIWF
Sbjct: 128 IYPWMRSTGVDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWF 187
Query: 287 QNRRMKWKKENKSKDGGS 304
QNRRMKWKKENK+ D S
Sbjct: 188 QNRRMKWKKENKTTDQSS 205
>gi|62526075|dbj|BAD95554.1| Hoxb-7 [Gallus gallus]
Length = 145
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 73/113 (64%), Positives = 84/113 (74%), Gaps = 2/113 (1%)
Query: 195 NHQQTPPNQPPSQPPNQPPNQQPNNTSASLPSPLYPWMRSQ-FERKRGRQTYTRYQTLEL 253
N P Q N+ +Q+ ++ + +YPWMRS +RKRGRQTYTRYQTLEL
Sbjct: 22 NLSMMCPGDASKQNCNKT-DQRDSDLQSDSNFRIYPWMRSTGTDRKRGRQTYTRYQTLEL 80
Query: 254 EKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSKDGGSDA 306
EKEFH+NRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK+ GS +
Sbjct: 81 EKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTACSGSSS 133
>gi|332692497|gb|AEE90176.1| Homeobox B7b [Anguilla anguilla]
Length = 221
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 68/78 (87%), Positives = 72/78 (92%), Gaps = 1/78 (1%)
Query: 228 LYPWMRSQ-FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWMRS +RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+ERQIKIWF
Sbjct: 128 IYPWMRSTGVDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWF 187
Query: 287 QNRRMKWKKENKSKDGGS 304
QNRRMKWKKENK+ D S
Sbjct: 188 QNRRMKWKKENKTTDQSS 205
>gi|402899491|ref|XP_003912729.1| PREDICTED: homeobox protein Hox-B7 [Papio anubis]
Length = 217
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 68/86 (79%), Positives = 76/86 (88%), Gaps = 1/86 (1%)
Query: 215 QQPNNTSASLPSPLYPWMRSQ-FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAH 273
Q+ ++ +A +YPWMRS +RKRGRQTYTRYQTLELEKEFH+NRYLTRRRRIEIAH
Sbjct: 113 QRDSDLAAESNFRIYPWMRSSGTDRKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAH 172
Query: 274 ALCLTERQIKIWFQNRRMKWKKENKS 299
ALCLTERQIKIWFQNRRMKWKKENK+
Sbjct: 173 ALCLTERQIKIWFQNRRMKWKKENKT 198
>gi|27805921|ref|NP_776767.1| homeobox protein Hox-B7 [Bos taurus]
gi|18203484|sp|Q9TT89.1|HXB7_BOVIN RecName: Full=Homeobox protein Hox-B7
gi|6573100|gb|AAF17552.1|AF200721_1 homeodomain-containing transcription factor [Bos taurus]
Length = 217
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 69/95 (72%), Positives = 77/95 (81%), Gaps = 1/95 (1%)
Query: 206 SQPPNQPPNQQPNNTSASLPSPLYPWMRSQ-FERKRGRQTYTRYQTLELEKEFHFNRYLT 264
S Q+ ++ +A +YPWMRS +RKRGRQTYTRYQTLELEKEFH+NRYLT
Sbjct: 104 SAKAAGAKEQRDSDLAAESNFRIYPWMRSSGTDRKRGRQTYTRYQTLELEKEFHYNRYLT 163
Query: 265 RRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKS 299
RRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK+
Sbjct: 164 RRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKT 198
>gi|332847298|ref|XP_511938.3| PREDICTED: homeobox protein Hox-B7 [Pan troglodytes]
gi|397514568|ref|XP_003827553.1| PREDICTED: homeobox protein Hox-B7 [Pan paniscus]
gi|410210976|gb|JAA02707.1| Alport syndrome, mental retardation, midface hypoplasia and
elliptocytosis chromosomal region gene 1 [Pan
troglodytes]
gi|410210978|gb|JAA02708.1| Alport syndrome, mental retardation, midface hypoplasia and
elliptocytosis chromosomal region gene 1 [Pan
troglodytes]
gi|410210980|gb|JAA02709.1| homeobox B7 [Pan troglodytes]
gi|410247334|gb|JAA11634.1| homeobox B7 [Pan troglodytes]
gi|410247336|gb|JAA11635.1| homeobox B7 [Pan troglodytes]
gi|410334655|gb|JAA36274.1| homeobox B7 [Pan troglodytes]
Length = 217
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 69/95 (72%), Positives = 77/95 (81%), Gaps = 1/95 (1%)
Query: 206 SQPPNQPPNQQPNNTSASLPSPLYPWMRSQ-FERKRGRQTYTRYQTLELEKEFHFNRYLT 264
S Q+ ++ +A +YPWMRS +RKRGRQTYTRYQTLELEKEFH+NRYLT
Sbjct: 104 SAKAAGAKEQRDSDLAAESNFRIYPWMRSSGTDRKRGRQTYTRYQTLELEKEFHYNRYLT 163
Query: 265 RRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKS 299
RRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK+
Sbjct: 164 RRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKT 198
>gi|296202579|ref|XP_002748518.1| PREDICTED: homeobox protein Hox-B7 [Callithrix jacchus]
Length = 217
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 69/95 (72%), Positives = 77/95 (81%), Gaps = 1/95 (1%)
Query: 206 SQPPNQPPNQQPNNTSASLPSPLYPWMRSQ-FERKRGRQTYTRYQTLELEKEFHFNRYLT 264
S Q+ ++ +A +YPWMRS +RKRGRQTYTRYQTLELEKEFH+NRYLT
Sbjct: 104 SAKAAGAKEQRDSDLAAEGNFRIYPWMRSSGTDRKRGRQTYTRYQTLELEKEFHYNRYLT 163
Query: 265 RRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKS 299
RRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK+
Sbjct: 164 RRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKA 198
>gi|297715941|ref|XP_002834301.1| PREDICTED: homeobox protein Hox-B7 [Pongo abelii]
Length = 217
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 69/95 (72%), Positives = 77/95 (81%), Gaps = 1/95 (1%)
Query: 206 SQPPNQPPNQQPNNTSASLPSPLYPWMRSQ-FERKRGRQTYTRYQTLELEKEFHFNRYLT 264
S Q+ ++ +A +YPWMRS +RKRGRQTYTRYQTLELEKEFH+NRYLT
Sbjct: 104 SAKAAGAKEQRDSDLAAESNFRIYPWMRSSGTDRKRGRQTYTRYQTLELEKEFHYNRYLT 163
Query: 265 RRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKS 299
RRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK+
Sbjct: 164 RRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKT 198
>gi|311267496|ref|XP_003131597.1| PREDICTED: homeobox protein Hox-B7-like [Sus scrofa]
Length = 217
Score = 150 bits (379), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 69/95 (72%), Positives = 77/95 (81%), Gaps = 1/95 (1%)
Query: 206 SQPPNQPPNQQPNNTSASLPSPLYPWMRSQ-FERKRGRQTYTRYQTLELEKEFHFNRYLT 264
S Q+ ++ +A +YPWMRS +RKRGRQTYTRYQTLELEKEFH+NRYLT
Sbjct: 104 SAKAAGAKEQRDSDLAAESNFRIYPWMRSSGTDRKRGRQTYTRYQTLELEKEFHYNRYLT 163
Query: 265 RRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKS 299
RRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK+
Sbjct: 164 RRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKT 198
>gi|403279485|ref|XP_003931280.1| PREDICTED: homeobox protein Hox-B7 [Saimiri boliviensis
boliviensis]
Length = 217
Score = 150 bits (379), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 69/95 (72%), Positives = 77/95 (81%), Gaps = 1/95 (1%)
Query: 206 SQPPNQPPNQQPNNTSASLPSPLYPWMRSQ-FERKRGRQTYTRYQTLELEKEFHFNRYLT 264
S Q+ ++ +A +YPWMRS +RKRGRQTYTRYQTLELEKEFH+NRYLT
Sbjct: 104 SAKAAGAKEQRDSDLAAEGNFRIYPWMRSSGTDRKRGRQTYTRYQTLELEKEFHYNRYLT 163
Query: 265 RRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKS 299
RRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK+
Sbjct: 164 RRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKT 198
>gi|359754088|gb|AEV59511.1| HOXA7 [Macropus eugenii]
Length = 227
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 68/88 (77%), Positives = 76/88 (86%), Gaps = 1/88 (1%)
Query: 228 LYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWMRS +RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF
Sbjct: 118 IYPWMRSSGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 177
Query: 287 QNRRMKWKKENKSKDGGSDAGSDITPAT 314
QNRRMKWKKE+K + + A ++ + T
Sbjct: 178 QNRRMKWKKEHKDEGSAAPAATESSSTT 205
>gi|395826620|ref|XP_003786515.1| PREDICTED: homeobox protein Hox-B7 [Otolemur garnettii]
Length = 217
Score = 150 bits (378), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 68/85 (80%), Positives = 75/85 (88%), Gaps = 1/85 (1%)
Query: 215 QQPNNTSASLPSPLYPWMRSQ-FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAH 273
Q+ ++ +A +YPWMRS +RKRGRQTYTRYQTLELEKEFH+NRYLTRRRRIEIAH
Sbjct: 113 QRDSDLAAESNFRIYPWMRSSGTDRKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAH 172
Query: 274 ALCLTERQIKIWFQNRRMKWKKENK 298
ALCLTERQIKIWFQNRRMKWKKENK
Sbjct: 173 ALCLTERQIKIWFQNRRMKWKKENK 197
>gi|109114195|ref|XP_001088822.1| PREDICTED: homeobox protein Hox-B7 [Macaca mulatta]
gi|355568484|gb|EHH24765.1| hypothetical protein EGK_08480 [Macaca mulatta]
gi|355753959|gb|EHH57924.1| hypothetical protein EGM_07669 [Macaca fascicularis]
Length = 217
Score = 150 bits (378), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 68/86 (79%), Positives = 76/86 (88%), Gaps = 1/86 (1%)
Query: 215 QQPNNTSASLPSPLYPWMRSQ-FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAH 273
Q+ ++ +A +YPWMRS +RKRGRQTYTRYQTLELEKEFH+NRYLTRRRRIEIAH
Sbjct: 113 QRDSDLAAESNFRIYPWMRSSGTDRKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAH 172
Query: 274 ALCLTERQIKIWFQNRRMKWKKENKS 299
ALCLTERQIKIWFQNRRMKWKKENK+
Sbjct: 173 ALCLTERQIKIWFQNRRMKWKKENKT 198
>gi|291405867|ref|XP_002719358.1| PREDICTED: homeobox B7 [Oryctolagus cuniculus]
Length = 217
Score = 150 bits (378), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 73/96 (76%), Positives = 81/96 (84%), Gaps = 2/96 (2%)
Query: 215 QQPNNTSASLPSPLYPWMRSQ-FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAH 273
Q+ ++ +A +YPWMRS +RKRGRQTYTRYQTLELEKEFH+NRYLTRRRRIEIAH
Sbjct: 113 QRDSDLAAESNFRIYPWMRSSGADRKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAH 172
Query: 274 ALCLTERQIKIWFQNRRMKWKKENKSKDGGSDAGSD 309
ALCLTERQIKIWFQNRRMKWKKENKS G+ AG D
Sbjct: 173 ALCLTERQIKIWFQNRRMKWKKENKSAGPGA-AGHD 207
>gi|213512172|ref|NP_001135146.1| homeobox protein HoxB7ab [Salmo salar]
gi|157816105|gb|ABV82071.1| homeobox protein HoxB7ab [Salmo salar]
gi|158702278|gb|ABW77476.1| homeobox protien HoxB7ab [Salmo salar]
Length = 223
Score = 150 bits (378), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 67/73 (91%), Positives = 70/73 (95%), Gaps = 1/73 (1%)
Query: 228 LYPWMRSQ-FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWMRS +RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF
Sbjct: 130 IYPWMRSSGADRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 189
Query: 287 QNRRMKWKKENKS 299
QNRRMKWKKENK+
Sbjct: 190 QNRRMKWKKENKT 202
>gi|444517712|gb|ELV11730.1| Homeobox protein Hox-B7 [Tupaia chinensis]
Length = 163
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 69/95 (72%), Positives = 77/95 (81%), Gaps = 1/95 (1%)
Query: 206 SQPPNQPPNQQPNNTSASLPSPLYPWMRSQ-FERKRGRQTYTRYQTLELEKEFHFNRYLT 264
S Q+ ++ +A +YPWMRS +RKRGRQTYTRYQTLELEKEFH+NRYLT
Sbjct: 50 SAKAAGAKEQRDSDLAAESNFRIYPWMRSSGTDRKRGRQTYTRYQTLELEKEFHYNRYLT 109
Query: 265 RRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKS 299
RRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK+
Sbjct: 110 RRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKT 144
>gi|344285925|ref|XP_003414710.1| PREDICTED: homeobox protein Hox-B7-like [Loxodonta africana]
Length = 217
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 69/91 (75%), Positives = 78/91 (85%), Gaps = 1/91 (1%)
Query: 215 QQPNNTSASLPSPLYPWMRSQ-FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAH 273
Q+ ++ +A +YPWMRS +RKRGRQTYTRYQTLELEKEFH+NRYLTRRRRIEIAH
Sbjct: 113 QRDSDLAAESNFRIYPWMRSSGTDRKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAH 172
Query: 274 ALCLTERQIKIWFQNRRMKWKKENKSKDGGS 304
ALCLTERQIKIWFQNRRMKWKKENK+ G+
Sbjct: 173 ALCLTERQIKIWFQNRRMKWKKENKAASPGA 203
>gi|359754100|gb|AEV59522.1| HOXB7 [Macropus eugenii]
Length = 217
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 68/87 (78%), Positives = 77/87 (88%), Gaps = 1/87 (1%)
Query: 214 NQQPNNTSASLPSPLYPWMRSQ-FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIA 272
+Q+ ++ +A +YPWMRS +RKRGRQTYTRYQTLELEKEFH+NRYLTRRRRIEIA
Sbjct: 112 DQRESDLAAESNFRIYPWMRSTGTDRKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIA 171
Query: 273 HALCLTERQIKIWFQNRRMKWKKENKS 299
HALCLTERQIKIWFQNRRMKWKKENK+
Sbjct: 172 HALCLTERQIKIWFQNRRMKWKKENKT 198
>gi|354474762|ref|XP_003499599.1| PREDICTED: homeobox protein Hox-B7-like [Cricetulus griseus]
Length = 217
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 69/90 (76%), Positives = 77/90 (85%), Gaps = 1/90 (1%)
Query: 215 QQPNNTSASLPSPLYPWMRSQ-FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAH 273
Q+ ++ +A +YPWMRS +RKRGRQTYTRYQTLELEKEFH+NRYLTRRRRIEIAH
Sbjct: 113 QRDSDLAAESNFRIYPWMRSSGTDRKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAH 172
Query: 274 ALCLTERQIKIWFQNRRMKWKKENKSKDGG 303
ALCLTERQIKIWFQNRRMKWKKENK+ G
Sbjct: 173 ALCLTERQIKIWFQNRRMKWKKENKTSGQG 202
>gi|213512800|ref|NP_001134382.1| Homeobox protein Hox-B7a [Salmo salar]
gi|157816085|gb|ABV82061.1| homeobox protein HoxB7aa [Salmo salar]
gi|158702266|gb|ABW77465.1| homeobox protein HoxB7aa [Salmo salar]
gi|209732842|gb|ACI67290.1| Homeobox protein Hox-B7a [Salmo salar]
gi|223646772|gb|ACN10144.1| Homeobox protein Hox-B7a [Salmo salar]
gi|223672627|gb|ACN12495.1| Homeobox protein Hox-B7a [Salmo salar]
Length = 223
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 67/73 (91%), Positives = 70/73 (95%), Gaps = 1/73 (1%)
Query: 228 LYPWMRSQ-FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWMRS +RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF
Sbjct: 130 IYPWMRSSGADRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 189
Query: 287 QNRRMKWKKENKS 299
QNRRMKWKKENK+
Sbjct: 190 QNRRMKWKKENKT 202
>gi|395532653|ref|XP_003768384.1| PREDICTED: homeobox protein Hox-B7 [Sarcophilus harrisii]
Length = 217
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 68/87 (78%), Positives = 77/87 (88%), Gaps = 1/87 (1%)
Query: 214 NQQPNNTSASLPSPLYPWMRSQ-FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIA 272
+Q+ ++ +A +YPWMRS +RKRGRQTYTRYQTLELEKEFH+NRYLTRRRRIEIA
Sbjct: 112 DQRESDLAAESNFRIYPWMRSTGTDRKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIA 171
Query: 273 HALCLTERQIKIWFQNRRMKWKKENKS 299
HALCLTERQIKIWFQNRRMKWKKENK+
Sbjct: 172 HALCLTERQIKIWFQNRRMKWKKENKT 198
>gi|148684077|gb|EDL16024.1| homeobox B7 [Mus musculus]
Length = 217
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/91 (75%), Positives = 78/91 (85%), Gaps = 1/91 (1%)
Query: 215 QQPNNTSASLPSPLYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAH 273
Q+ ++ +A +YPWMRS +RKRGRQTYTRYQTLELEKEFH+NRYLTRRRRIEIAH
Sbjct: 113 QRDSDLAAESNFRIYPWMRSSGPDRKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAH 172
Query: 274 ALCLTERQIKIWFQNRRMKWKKENKSKDGGS 304
ALCLTERQIKIWFQNRRMKWKKENK+ G+
Sbjct: 173 ALCLTERQIKIWFQNRRMKWKKENKTSGPGT 203
>gi|431890744|gb|ELK01623.1| Homeobox protein Hox-B7 [Pteropus alecto]
Length = 217
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 68/85 (80%), Positives = 75/85 (88%), Gaps = 1/85 (1%)
Query: 215 QQPNNTSASLPSPLYPWMRSQ-FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAH 273
Q+ ++ +A +YPWMRS +RKRGRQTYTRYQTLELEKEFH+NRYLTRRRRIEIAH
Sbjct: 113 QRDSDLAAESNFRIYPWMRSSGTDRKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAH 172
Query: 274 ALCLTERQIKIWFQNRRMKWKKENK 298
ALCLTERQIKIWFQNRRMKWKKENK
Sbjct: 173 ALCLTERQIKIWFQNRRMKWKKENK 197
>gi|225717090|gb|ACO14391.1| Homeobox protein Hox-B7a [Esox lucius]
Length = 215
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 67/73 (91%), Positives = 70/73 (95%), Gaps = 1/73 (1%)
Query: 228 LYPWMRSQ-FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWMRS +RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF
Sbjct: 123 IYPWMRSSGADRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 182
Query: 287 QNRRMKWKKENKS 299
QNRRMKWKKENK+
Sbjct: 183 QNRRMKWKKENKT 195
>gi|85068580|ref|NP_004493.3| homeobox protein Hox-B7 [Homo sapiens]
gi|311033482|sp|P09629.4|HXB7_HUMAN RecName: Full=Homeobox protein Hox-B7; AltName: Full=Homeobox
protein HHO.C1; AltName: Full=Homeobox protein Hox-2C
Length = 217
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 68/95 (71%), Positives = 76/95 (80%), Gaps = 1/95 (1%)
Query: 206 SQPPNQPPNQQPNNTSASLPSPLYPWMRSQ-FERKRGRQTYTRYQTLELEKEFHFNRYLT 264
S Q+ ++ +A +YPWMRS +RKRGRQTYTRYQTLELEKEFH+NRYLT
Sbjct: 104 SAKAAGAKEQRDSDLAAESNFRIYPWMRSSGTDRKRGRQTYTRYQTLELEKEFHYNRYLT 163
Query: 265 RRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKS 299
RRRRIEIAH LCLTERQIKIWFQNRRMKWKKENK+
Sbjct: 164 RRRRIEIAHTLCLTERQIKIWFQNRRMKWKKENKT 198
>gi|15929847|gb|AAH15345.1| Homeobox B7 [Homo sapiens]
gi|60816679|gb|AAX36392.1| homeobox B7 [synthetic construct]
gi|61358381|gb|AAX41558.1| homeobox B7 [synthetic construct]
gi|61359764|gb|AAX41764.1| homeobox B7 [synthetic construct]
gi|119615131|gb|EAW94725.1| homeobox B7, isoform CRA_a [Homo sapiens]
Length = 217
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 68/95 (71%), Positives = 76/95 (80%), Gaps = 1/95 (1%)
Query: 206 SQPPNQPPNQQPNNTSASLPSPLYPWMRSQ-FERKRGRQTYTRYQTLELEKEFHFNRYLT 264
S Q+ ++ +A +YPWMRS +RKRGRQTYTRYQTLELEKEFH+NRYLT
Sbjct: 104 SAKAAGAKEQRDSDLAAESNFRIYPWMRSSGTDRKRGRQTYTRYQTLELEKEFHYNRYLT 163
Query: 265 RRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKS 299
RRRRIEIAH LCLTERQIKIWFQNRRMKWKKENK+
Sbjct: 164 RRRRIEIAHTLCLTERQIKIWFQNRRMKWKKENKT 198
>gi|158254738|dbj|BAF83342.1| unnamed protein product [Homo sapiens]
Length = 217
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 68/95 (71%), Positives = 76/95 (80%), Gaps = 1/95 (1%)
Query: 206 SQPPNQPPNQQPNNTSASLPSPLYPWMRSQ-FERKRGRQTYTRYQTLELEKEFHFNRYLT 264
S Q+ ++ +A +YPWMRS +RKRGRQTYTRYQTLELEKEFH+NRYLT
Sbjct: 104 SAKAAGAKEQRDSDLAAESNFRIYPWMRSSGTDRKRGRQTYTRYQTLELEKEFHYNRYLT 163
Query: 265 RRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKS 299
RRRRIEIAH LCLTERQIKIWFQNRRMKWKKENK+
Sbjct: 164 RRRRIEIAHTLCLTERQIKIWFQNRRMKWKKENKT 198
>gi|60828272|gb|AAX36836.1| homeobox B7 [synthetic construct]
gi|61368483|gb|AAX43187.1| homeobox B7 [synthetic construct]
gi|61369779|gb|AAX43390.1| homeobox B7 [synthetic construct]
Length = 218
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 68/95 (71%), Positives = 76/95 (80%), Gaps = 1/95 (1%)
Query: 206 SQPPNQPPNQQPNNTSASLPSPLYPWMRSQ-FERKRGRQTYTRYQTLELEKEFHFNRYLT 264
S Q+ ++ +A +YPWMRS +RKRGRQTYTRYQTLELEKEFH+NRYLT
Sbjct: 104 SAKAAGAKEQRDSDLAAESNFRIYPWMRSSGTDRKRGRQTYTRYQTLELEKEFHYNRYLT 163
Query: 265 RRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKS 299
RRRRIEIAH LCLTERQIKIWFQNRRMKWKKENK+
Sbjct: 164 RRRRIEIAHTLCLTERQIKIWFQNRRMKWKKENKT 198
>gi|255742447|gb|ACU32561.1| homeobox protein HoxB7 [Callorhinchus milii]
Length = 211
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 65/73 (89%), Positives = 70/73 (95%), Gaps = 1/73 (1%)
Query: 228 LYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWM+S +RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF
Sbjct: 126 IYPWMKSSASDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 185
Query: 287 QNRRMKWKKENKS 299
QNRRMKWKKE+K+
Sbjct: 186 QNRRMKWKKESKA 198
>gi|147900428|ref|NP_001079110.1| homeobox protein Hox-B7-A [Xenopus laevis]
gi|3023938|sp|Q91771.1|HXB7A_XENLA RecName: Full=Homeobox protein Hox-B7-A; AltName: Full=MM3;
AltName: Full=XlHbox-2 A
gi|530987|gb|AAA49754.1| homeobox protein [Xenopus laevis]
gi|50415073|gb|AAH77970.1| Hbox2-A protein [Xenopus laevis]
Length = 220
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 67/80 (83%), Positives = 72/80 (90%), Gaps = 1/80 (1%)
Query: 228 LYPWMRSQ-FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWMRS +RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAH LCLTERQIKIWF
Sbjct: 129 IYPWMRSAGADRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHVLCLTERQIKIWF 188
Query: 287 QNRRMKWKKENKSKDGGSDA 306
QNRRMKWKKENK+ S++
Sbjct: 189 QNRRMKWKKENKASSPSSNS 208
>gi|148234492|ref|NP_001082538.1| homeobox protein Hox-A7 [Xenopus laevis]
gi|123281|sp|P09071.1|HXA7_XENLA RecName: Full=Homeobox protein Hox-A7; AltName: Full=Xhox-36;
AltName: Full=XlHbox-3
gi|537600|gb|AAA49753.1| homeobox protein [Xenopus laevis]
gi|213626867|gb|AAI70290.1| Homeobox protein [Xenopus laevis]
gi|213626991|gb|AAI70546.1| Homeobox protein [Xenopus laevis]
Length = 209
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 72/90 (80%), Positives = 78/90 (86%), Gaps = 2/90 (2%)
Query: 228 LYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWMRS +RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF
Sbjct: 111 IYPWMRSSGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 170
Query: 287 QNRRMKWKKENKSK-DGGSDAGSDITPATS 315
QNRRMKWKKE+K + D DAG + T T+
Sbjct: 171 QNRRMKWKKEHKEESDQTPDAGEESTAPTT 200
>gi|449268334|gb|EMC79203.1| Homeobox protein Hox-A7 [Columba livia]
Length = 219
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 75/124 (60%), Positives = 90/124 (72%), Gaps = 8/124 (6%)
Query: 193 VVNHQQTPPNQPPSQPPNQPPNQQPNNTSASLPSPLYPWMRSQF-ERKRGRQTYTRYQTL 251
V+ ++ T P+ ++ N +PN +YPWMRS +RKRGRQTYTRYQTL
Sbjct: 90 VLCNELTKPSCEKAEESNLHNQAEPNFR-------IYPWMRSSGPDRKRGRQTYTRYQTL 142
Query: 252 ELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSKDGGSDAGSDIT 311
ELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE+K + + A ++ T
Sbjct: 143 ELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKEESSSTPAPNEPT 202
Query: 312 PATS 315
A +
Sbjct: 203 SAAA 206
>gi|334323085|ref|XP_003340341.1| PREDICTED: homeobox protein Hox-B7-like [Monodelphis domestica]
Length = 217
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 69/95 (72%), Positives = 78/95 (82%), Gaps = 1/95 (1%)
Query: 206 SQPPNQPPNQQPNNTSASLPSPLYPWMRSQ-FERKRGRQTYTRYQTLELEKEFHFNRYLT 264
S +Q+ ++ +A +YPWMRS +RKRGRQTYTRYQTLELEKEFH+NRYLT
Sbjct: 104 SAKAGSGKDQRESDLAAESNFRIYPWMRSTGTDRKRGRQTYTRYQTLELEKEFHYNRYLT 163
Query: 265 RRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKS 299
RRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK+
Sbjct: 164 RRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKT 198
>gi|224045306|ref|XP_002194801.1| PREDICTED: homeobox protein Hox-A7 [Taeniopygia guttata]
Length = 219
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 75/124 (60%), Positives = 90/124 (72%), Gaps = 8/124 (6%)
Query: 193 VVNHQQTPPNQPPSQPPNQPPNQQPNNTSASLPSPLYPWMRSQF-ERKRGRQTYTRYQTL 251
V+ ++ T P+ ++ N +PN +YPWMRS +RKRGRQTYTRYQTL
Sbjct: 90 VLCNELTKPSCEKAEESNLHNQAEPN-------FRIYPWMRSSGPDRKRGRQTYTRYQTL 142
Query: 252 ELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSKDGGSDAGSDIT 311
ELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE+K + + A ++ T
Sbjct: 143 ELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKEESSSTPAPNEPT 202
Query: 312 PATS 315
A +
Sbjct: 203 SAAA 206
>gi|344249137|gb|EGW05241.1| Homeobox protein Hox-B7 [Cricetulus griseus]
Length = 153
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 69/93 (74%), Positives = 77/93 (82%), Gaps = 1/93 (1%)
Query: 212 PPNQQPNNTSASLPSPLYPWMRSQ-FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIE 270
Q+ ++ +A +YPWMRS +RKRGRQTYTRYQTLELEKEFH+NRYLTRRRRIE
Sbjct: 46 AKEQRDSDLAAESNFRIYPWMRSSGTDRKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIE 105
Query: 271 IAHALCLTERQIKIWFQNRRMKWKKENKSKDGG 303
IAHALCLTERQIKIWFQNRRMKWKKENK+ G
Sbjct: 106 IAHALCLTERQIKIWFQNRRMKWKKENKTSGQG 138
>gi|224086908|ref|XP_002187141.1| PREDICTED: homeobox protein Hox-B7 isoform 1 [Taeniopygia guttata]
gi|449491428|ref|XP_004174234.1| PREDICTED: homeobox protein Hox-B7 isoform 2 [Taeniopygia guttata]
Length = 217
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 68/78 (87%), Positives = 72/78 (92%), Gaps = 1/78 (1%)
Query: 228 LYPWMRSQ-FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWMRS +RKRGRQTYTRYQTLELEKEFH+NRYLTRRRRIEIAHALCLTERQIKIWF
Sbjct: 126 IYPWMRSTGTDRKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWF 185
Query: 287 QNRRMKWKKENKSKDGGS 304
QNRRMKWKKENK+ GS
Sbjct: 186 QNRRMKWKKENKTACPGS 203
>gi|148232956|ref|NP_001084118.1| homeobox protein Hox-B7-B [Xenopus laevis]
gi|67678245|gb|AAH97639.1| Hoxb7 protein [Xenopus laevis]
Length = 221
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 67/80 (83%), Positives = 72/80 (90%), Gaps = 1/80 (1%)
Query: 228 LYPWMRSQ-FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWMRS +RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAH LCLTERQIKIWF
Sbjct: 127 IYPWMRSAGSDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHTLCLTERQIKIWF 186
Query: 287 QNRRMKWKKENKSKDGGSDA 306
QNRRMKWKKENK+ S++
Sbjct: 187 QNRRMKWKKENKASSPSSNS 206
>gi|123274|sp|P04476.1|HXB7B_XENLA RecName: Full=Homeobox protein Hox-B7-B; AltName: Full=P52;
AltName: Full=XlHbox-2 B
gi|64748|emb|CAA29814.1| unnamed protein product [Xenopus laevis]
Length = 220
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 67/80 (83%), Positives = 72/80 (90%), Gaps = 1/80 (1%)
Query: 228 LYPWMRSQ-FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWMRS +RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAH LCLTERQIKIWF
Sbjct: 127 IYPWMRSAGSDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHTLCLTERQIKIWF 186
Query: 287 QNRRMKWKKENKSKDGGSDA 306
QNRRMKWKKENK+ S++
Sbjct: 187 QNRRMKWKKENKASSPSSNS 206
>gi|327280468|ref|XP_003224974.1| PREDICTED: homeobox protein Hox-A7-like [Anolis carolinensis]
Length = 254
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 66/72 (91%), Positives = 69/72 (95%), Gaps = 1/72 (1%)
Query: 228 LYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWMRS +RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF
Sbjct: 137 IYPWMRSSGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 196
Query: 287 QNRRMKWKKENK 298
QNRRMKWKKE+K
Sbjct: 197 QNRRMKWKKEHK 208
>gi|51390|emb|CAA29934.1| unnamed protein product [Mus musculus]
gi|861031|emb|CAA68494.1| 2.3 gene product [Mus musculus]
Length = 217
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 67/86 (77%), Positives = 75/86 (87%), Gaps = 1/86 (1%)
Query: 215 QQPNNTSASLPSPLYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAH 273
Q+ ++ +A +YPWMRS +RKRGRQTYTRYQTLELEKEFH+NRYLTRRRRIEIAH
Sbjct: 113 QRDSDLAAESNFRIYPWMRSSGPDRKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAH 172
Query: 274 ALCLTERQIKIWFQNRRMKWKKENKS 299
LCLTERQIKIWFQNRRMKWKKENK+
Sbjct: 173 TLCLTERQIKIWFQNRRMKWKKENKT 198
>gi|149633997|ref|XP_001509365.1| PREDICTED: homeobox protein Hox-A7-like [Ornithorhynchus anatinus]
Length = 224
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 66/72 (91%), Positives = 69/72 (95%), Gaps = 1/72 (1%)
Query: 228 LYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWMRS +RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF
Sbjct: 118 IYPWMRSSGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 177
Query: 287 QNRRMKWKKENK 298
QNRRMKWKKE+K
Sbjct: 178 QNRRMKWKKEHK 189
>gi|301128885|emb|CBL59348.1| HoxB7 [Scyliorhinus canicula]
Length = 211
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 65/72 (90%), Positives = 69/72 (95%), Gaps = 1/72 (1%)
Query: 228 LYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWM+S +RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF
Sbjct: 126 IYPWMKSSASDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 185
Query: 287 QNRRMKWKKENK 298
QNRRMKWKKE+K
Sbjct: 186 QNRRMKWKKESK 197
>gi|327275818|ref|XP_003222669.1| PREDICTED: homeobox protein Hox-B7-like [Anolis carolinensis]
Length = 219
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 68/80 (85%), Positives = 73/80 (91%), Gaps = 1/80 (1%)
Query: 228 LYPWMRSQ-FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWMRS +RKRGRQTYTRYQTLELEKEFH+NRYLTRRRRIEIAHALCLTERQIKIWF
Sbjct: 128 IYPWMRSTGTDRKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWF 187
Query: 287 QNRRMKWKKENKSKDGGSDA 306
QNRRMKWKKENK GS++
Sbjct: 188 QNRRMKWKKENKPAGPGSNS 207
>gi|309313|gb|AAA37833.1| hox-1.1 peptide [Mus musculus]
Length = 229
Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 70/90 (77%), Positives = 75/90 (83%), Gaps = 2/90 (2%)
Query: 228 LYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWMRS +RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF
Sbjct: 118 IYPWMRSSGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 177
Query: 287 QNRRMKWKKENKSKDGGSDAG-SDITPATS 315
QNRRMKWKKE+K + A D P+ S
Sbjct: 178 QNRRMKWKKEHKDESQAPTAAPEDAVPSVS 207
>gi|49169787|ref|NP_989926.1| homeobox protein Hox-A7 [Gallus gallus]
gi|363730028|ref|XP_003640750.1| PREDICTED: homeobox protein Hox-A7-like [Gallus gallus]
gi|363730175|ref|XP_003640779.1| PREDICTED: homeobox protein Hox-A7-like [Gallus gallus]
gi|60392400|sp|Q90VZ9.1|HXA7_CHICK RecName: Full=Homeobox protein Hox-A7
gi|15553502|gb|AAL01899.1|AF408695_1 homeodomain transcription factor HoxA-7 [Gallus gallus]
gi|13872753|emb|CAC37629.1| Hoxa-7 protein [Gallus gallus]
Length = 219
Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 69/89 (77%), Positives = 77/89 (86%), Gaps = 1/89 (1%)
Query: 228 LYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWMRS +RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF
Sbjct: 118 IYPWMRSSGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 177
Query: 287 QNRRMKWKKENKSKDGGSDAGSDITPATS 315
QNRRMKWKKE+K + + A ++ T A +
Sbjct: 178 QNRRMKWKKEHKEESSSTPAPNEPTSAAA 206
>gi|220898195|gb|ACL81450.1| HoxB7 [Latimeria menadoensis]
Length = 216
Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 66/73 (90%), Positives = 70/73 (95%), Gaps = 1/73 (1%)
Query: 228 LYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWMRS +RKRGRQTYTRYQTLELEKEFH+NRYLTRRRRIEIAHALCLTERQIKIWF
Sbjct: 126 IYPWMRSTGPDRKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWF 185
Query: 287 QNRRMKWKKENKS 299
QNRRMKWKKENK+
Sbjct: 186 QNRRMKWKKENKT 198
>gi|334349107|ref|XP_003342150.1| PREDICTED: homeobox protein Hox-A7-like [Monodelphis domestica]
Length = 226
Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 66/72 (91%), Positives = 69/72 (95%), Gaps = 1/72 (1%)
Query: 228 LYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWMRS +RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF
Sbjct: 118 IYPWMRSSGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 177
Query: 287 QNRRMKWKKENK 298
QNRRMKWKKE+K
Sbjct: 178 QNRRMKWKKEHK 189
>gi|88014652|ref|NP_034590.2| homeobox protein Hox-B7 [Mus musculus]
gi|114152821|sp|P09024.2|HXB7_MOUSE RecName: Full=Homeobox protein Hox-B7; AltName: Full=Homeobox
protein Hox-2.3; AltName: Full=Homeobox protein MH-22B;
AltName: Full=Homeobox protein MuB1
gi|147897801|gb|AAI40345.1| Homeo box B7 [synthetic construct]
Length = 217
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 68/91 (74%), Positives = 77/91 (84%), Gaps = 1/91 (1%)
Query: 215 QQPNNTSASLPSPLYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAH 273
Q+ ++ +A +YPWMRS +RKRGRQTYTRYQTLELEKEFH+NRYLTRRRRIEIAH
Sbjct: 113 QRDSDLAAESNFRIYPWMRSSGPDRKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAH 172
Query: 274 ALCLTERQIKIWFQNRRMKWKKENKSKDGGS 304
LCLTERQIKIWFQNRRMKWKKENK+ G+
Sbjct: 173 TLCLTERQIKIWFQNRRMKWKKENKTSGPGT 203
>gi|6754234|ref|NP_034585.1| homeobox protein Hox-A7 [Mus musculus]
gi|1346331|sp|P02830.2|HXA7_MOUSE RecName: Full=Homeobox protein Hox-A7; AltName: Full=Homeobox
protein Hox-1.1; AltName: Full=Homeobox protein M6-12;
Short=M6
gi|664758|gb|AAC52160.1| Hoxa7 [Mus musculus]
gi|26329169|dbj|BAC28323.1| unnamed protein product [Mus musculus]
gi|124297803|gb|AAI31979.1| Homeo box A7 [Mus musculus]
gi|124376130|gb|AAI32644.1| Homeo box A7 [Mus musculus]
gi|148666246|gb|EDK98662.1| homeobox A7, isoform CRA_c [Mus musculus]
Length = 229
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 70/90 (77%), Positives = 75/90 (83%), Gaps = 2/90 (2%)
Query: 228 LYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWMRS +RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF
Sbjct: 118 IYPWMRSSGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 177
Query: 287 QNRRMKWKKENKSKDGGSDAG-SDITPATS 315
QNRRMKWKKE+K + A D P+ S
Sbjct: 178 QNRRMKWKKEHKDESQAPTAAPEDAVPSVS 207
>gi|158711670|ref|NP_001102703.2| homeobox protein Hox-A7 [Rattus norvegicus]
gi|392347330|ref|XP_003749804.1| PREDICTED: homeobox protein Hox-A7-like [Rattus norvegicus]
gi|392356117|ref|XP_003752229.1| PREDICTED: homeobox protein Hox-A7-like [Rattus norvegicus]
Length = 229
Score = 147 bits (370), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 66/72 (91%), Positives = 69/72 (95%), Gaps = 1/72 (1%)
Query: 228 LYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWMRS +RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF
Sbjct: 118 IYPWMRSSGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 177
Query: 287 QNRRMKWKKENK 298
QNRRMKWKKE+K
Sbjct: 178 QNRRMKWKKEHK 189
>gi|14916597|sp|Q9IA25.1|HXA7_HETFR RecName: Full=Homeobox protein Hox-A7
gi|7271834|gb|AAF44645.1|AF224262_7 HoxA7 [Heterodontus francisci]
Length = 208
Score = 147 bits (370), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 68/83 (81%), Positives = 73/83 (87%), Gaps = 3/83 (3%)
Query: 228 LYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWMR+ +RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF
Sbjct: 124 IYPWMRNAGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 183
Query: 287 QNRRMKWKKENKSKDGGSDAGSD 309
QNRRMKWKKE K+ G S S+
Sbjct: 184 QNRRMKWKKETKA--GSSSTTSE 204
>gi|426355750|ref|XP_004045271.1| PREDICTED: homeobox protein Hox-A7 [Gorilla gorilla gorilla]
Length = 230
Score = 147 bits (370), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 66/72 (91%), Positives = 69/72 (95%), Gaps = 1/72 (1%)
Query: 228 LYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWMRS +RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF
Sbjct: 119 IYPWMRSSGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 178
Query: 287 QNRRMKWKKENK 298
QNRRMKWKKE+K
Sbjct: 179 QNRRMKWKKEHK 190
>gi|395540360|ref|XP_003772123.1| PREDICTED: homeobox protein Hox-A7 [Sarcophilus harrisii]
Length = 226
Score = 147 bits (370), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 66/72 (91%), Positives = 69/72 (95%), Gaps = 1/72 (1%)
Query: 228 LYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWMRS +RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF
Sbjct: 118 IYPWMRSSGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 177
Query: 287 QNRRMKWKKENK 298
QNRRMKWKKE+K
Sbjct: 178 QNRRMKWKKEHK 189
>gi|440899267|gb|ELR50596.1| Homeobox protein Hox-A7, partial [Bos grunniens mutus]
Length = 237
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 66/72 (91%), Positives = 69/72 (95%), Gaps = 1/72 (1%)
Query: 228 LYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWMRS +RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF
Sbjct: 119 IYPWMRSSGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 178
Query: 287 QNRRMKWKKENK 298
QNRRMKWKKE+K
Sbjct: 179 QNRRMKWKKEHK 190
>gi|194666358|ref|XP_872865.2| PREDICTED: homeobox protein Hox-A7 [Bos taurus]
gi|297473885|ref|XP_002686901.1| PREDICTED: homeobox protein Hox-A7 [Bos taurus]
gi|296488412|tpg|DAA30525.1| TPA: homeobox A7-like [Bos taurus]
Length = 238
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 66/72 (91%), Positives = 69/72 (95%), Gaps = 1/72 (1%)
Query: 228 LYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWMRS +RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF
Sbjct: 119 IYPWMRSSGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 178
Query: 287 QNRRMKWKKENK 298
QNRRMKWKKE+K
Sbjct: 179 QNRRMKWKKEHK 190
>gi|351704297|gb|EHB07216.1| Homeobox protein Hox-A7 [Heterocephalus glaber]
Length = 232
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 72/91 (79%), Positives = 78/91 (85%), Gaps = 9/91 (9%)
Query: 228 LYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWMRS +RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF
Sbjct: 119 IYPWMRSSGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 178
Query: 287 QNRRMKWKKENKSKDGGSDAGSDITPATSPQ 317
QNRRMKWKKE+K + GS TP T+P+
Sbjct: 179 QNRRMKWKKEHK------EEGS--TPTTAPE 201
>gi|170649680|gb|ACB21265.1| homeobox A7 (predicted) [Callicebus moloch]
Length = 229
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 66/72 (91%), Positives = 69/72 (95%), Gaps = 1/72 (1%)
Query: 228 LYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWMRS +RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF
Sbjct: 119 IYPWMRSSGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 178
Query: 287 QNRRMKWKKENK 298
QNRRMKWKKE+K
Sbjct: 179 QNRRMKWKKEHK 190
>gi|220898183|gb|ACL81439.1| HoxA7 [Latimeria menadoensis]
Length = 212
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 67/81 (82%), Positives = 73/81 (90%), Gaps = 1/81 (1%)
Query: 228 LYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWMRS ++KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF
Sbjct: 120 IYPWMRSSGPDKKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 179
Query: 287 QNRRMKWKKENKSKDGGSDAG 307
QNRRMKWKKE+K + S+ G
Sbjct: 180 QNRRMKWKKEHKEDNFTSNNG 200
>gi|332692470|gb|AEE90152.1| Homeobox A7a [Anguilla anguilla]
Length = 236
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 71/97 (73%), Positives = 76/97 (78%), Gaps = 9/97 (9%)
Query: 228 LYPWMRSQF---------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
LYPWMRS ERKRGRQTY+RYQTLELEKEFHFNRYLTRRRRIEIAHALCLT
Sbjct: 114 LYPWMRSSGMLRTARGYPERKRGRQTYSRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 173
Query: 279 ERQIKIWFQNRRMKWKKENKSKDGGSDAGSDITPATS 315
ERQIKIWFQNRRMKWKK++K+ G +G D A S
Sbjct: 174 ERQIKIWFQNRRMKWKKDHKADGPGRGSGPDSAVAAS 210
>gi|254212175|gb|ACT65750.1| Hoxa7 [Leucoraja erinacea]
Length = 208
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/91 (76%), Positives = 73/91 (80%), Gaps = 8/91 (8%)
Query: 228 LYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWMR+ +RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF
Sbjct: 124 IYPWMRNAGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 183
Query: 287 QNRRMKWKKENKSKDGGSDAGSDITPATSPQ 317
QNRRMKWKKE K AGS T Q
Sbjct: 184 QNRRMKWKKETK-------AGSSSTTTEEKQ 207
>gi|301128873|emb|CBL59337.1| HoxA7 [Scyliorhinus canicula]
Length = 208
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/91 (76%), Positives = 73/91 (80%), Gaps = 8/91 (8%)
Query: 228 LYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWMR+ +RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF
Sbjct: 124 IYPWMRNAGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 183
Query: 287 QNRRMKWKKENKSKDGGSDAGSDITPATSPQ 317
QNRRMKWKKE K AGS T Q
Sbjct: 184 QNRRMKWKKETK-------AGSSSTTTEEKQ 207
>gi|62898059|dbj|BAD96969.1| homeo box B7 variant [Homo sapiens]
Length = 217
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 67/95 (70%), Positives = 75/95 (78%), Gaps = 1/95 (1%)
Query: 206 SQPPNQPPNQQPNNTSASLPSPLYPWMRSQ-FERKRGRQTYTRYQTLELEKEFHFNRYLT 264
S Q+ ++ +A +YPWMRS +RKRGRQTYTRYQTLEL KEFH+NRYLT
Sbjct: 104 SAKAAGAKEQRDSDLAAESNFRIYPWMRSSGTDRKRGRQTYTRYQTLELGKEFHYNRYLT 163
Query: 265 RRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKS 299
RRRRIEIAH LCLTERQIKIWFQNRRMKWKKENK+
Sbjct: 164 RRRRIEIAHTLCLTERQIKIWFQNRRMKWKKENKT 198
>gi|242011824|ref|XP_002426644.1| Homeobox protein Hox-A7, putative [Pediculus humanus corporis]
gi|212510808|gb|EEB13906.1| Homeobox protein Hox-A7, putative [Pediculus humanus corporis]
Length = 94
Score = 146 bits (368), Expect = 1e-32, Method: Composition-based stats.
Identities = 73/83 (87%), Positives = 75/83 (90%), Gaps = 2/83 (2%)
Query: 237 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE
Sbjct: 9 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 68
Query: 297 NKSKD--GGSDAGSDITPATSPQ 317
NKSK G D S+I+P TSPQ
Sbjct: 69 NKSKGEPGSGDGDSEISPQTSPQ 91
>gi|397472859|ref|XP_003807951.1| PREDICTED: homeobox protein Hox-A7 [Pan paniscus]
Length = 230
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/76 (89%), Positives = 71/76 (93%), Gaps = 2/76 (2%)
Query: 228 LYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWMRS +RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF
Sbjct: 119 IYPWMRSSGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 178
Query: 287 QNRRMKWKKENKSKDG 302
QNRRMKWKKE+K DG
Sbjct: 179 QNRRMKWKKEHKD-DG 193
>gi|311275740|ref|XP_003134888.1| PREDICTED: homeobox protein Hox-A7-like [Sus scrofa]
Length = 234
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 66/74 (89%), Positives = 70/74 (94%), Gaps = 1/74 (1%)
Query: 228 LYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWMRS +RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF
Sbjct: 119 IYPWMRSSGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 178
Query: 287 QNRRMKWKKENKSK 300
QNRRMKWKKE+K +
Sbjct: 179 QNRRMKWKKEHKDE 192
>gi|410215418|gb|JAA04928.1| homeobox A7 [Pan troglodytes]
gi|410339189|gb|JAA38541.1| homeobox A7 [Pan troglodytes]
Length = 230
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/76 (89%), Positives = 71/76 (93%), Gaps = 2/76 (2%)
Query: 228 LYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWMRS +RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF
Sbjct: 119 IYPWMRSSGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 178
Query: 287 QNRRMKWKKENKSKDG 302
QNRRMKWKKE+K DG
Sbjct: 179 QNRRMKWKKEHKD-DG 193
>gi|207452734|ref|NP_001129067.1| homeobox protein Hox-A7 [Pan troglodytes]
gi|146324919|sp|A2T7F3.1|HXA7_PANTR RecName: Full=Homeobox protein Hox-A7
gi|124111397|gb|ABM92108.1| HOXA7 [Pan troglodytes]
Length = 230
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/76 (89%), Positives = 71/76 (93%), Gaps = 2/76 (2%)
Query: 228 LYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWMRS +RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF
Sbjct: 119 IYPWMRSSGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 178
Query: 287 QNRRMKWKKENKSKDG 302
QNRRMKWKKE+K DG
Sbjct: 179 QNRRMKWKKEHKD-DG 193
>gi|344270291|ref|XP_003406979.1| PREDICTED: homeobox protein Hox-A7-like [Loxodonta africana]
Length = 236
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 66/72 (91%), Positives = 69/72 (95%), Gaps = 1/72 (1%)
Query: 228 LYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWMRS +RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF
Sbjct: 119 IYPWMRSSGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 178
Query: 287 QNRRMKWKKENK 298
QNRRMKWKKE+K
Sbjct: 179 QNRRMKWKKEHK 190
>gi|297680780|ref|XP_002818146.1| PREDICTED: homeobox protein Hox-A7 [Pongo abelii]
Length = 230
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 66/72 (91%), Positives = 69/72 (95%), Gaps = 1/72 (1%)
Query: 228 LYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWMRS +RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF
Sbjct: 119 IYPWMRSSGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 178
Query: 287 QNRRMKWKKENK 298
QNRRMKWKKE+K
Sbjct: 179 QNRRMKWKKEHK 190
>gi|24497556|ref|NP_008827.2| homeobox protein Hox-A7 [Homo sapiens]
gi|311033439|sp|P31268.3|HXA7_HUMAN RecName: Full=Homeobox protein Hox-A7; AltName: Full=Homeobox
protein Hox 1.1; AltName: Full=Homeobox protein Hox-1A
gi|51094977|gb|EAL24221.1| homeo box A7 [Homo sapiens]
gi|119614283|gb|EAW93877.1| homeobox A7 [Homo sapiens]
gi|147897929|gb|AAI40402.1| Homeobox A7 [synthetic construct]
gi|151555121|gb|AAI48693.1| Homeobox A7 [synthetic construct]
Length = 230
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/72 (91%), Positives = 69/72 (95%), Gaps = 1/72 (1%)
Query: 228 LYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWMRS +RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF
Sbjct: 119 IYPWMRSSGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 178
Query: 287 QNRRMKWKKENK 298
QNRRMKWKKE+K
Sbjct: 179 QNRRMKWKKEHK 190
>gi|255742433|gb|ACU32548.1| homeobox protein HoxA7 [Callorhinchus milii]
Length = 212
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 65/73 (89%), Positives = 69/73 (94%), Gaps = 1/73 (1%)
Query: 228 LYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWMR+ +RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF
Sbjct: 124 IYPWMRNAGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 183
Query: 287 QNRRMKWKKENKS 299
QNRRMKWKKE K+
Sbjct: 184 QNRRMKWKKETKA 196
>gi|2739071|gb|AAB94604.1| homeobox transcription factor HOXA7 [Homo sapiens]
gi|3097078|emb|CAA06713.1| hoxA7 [Homo sapiens]
gi|208966494|dbj|BAG73261.1| homeobox A7 [synthetic construct]
Length = 230
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/72 (91%), Positives = 69/72 (95%), Gaps = 1/72 (1%)
Query: 228 LYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWMRS +RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF
Sbjct: 119 IYPWMRSSGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 178
Query: 287 QNRRMKWKKENK 298
QNRRMKWKKE+K
Sbjct: 179 QNRRMKWKKEHK 190
>gi|403287989|ref|XP_003935200.1| PREDICTED: homeobox protein Hox-A7 [Saimiri boliviensis
boliviensis]
Length = 229
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/72 (91%), Positives = 69/72 (95%), Gaps = 1/72 (1%)
Query: 228 LYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWMRS +RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF
Sbjct: 119 IYPWMRSSGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 178
Query: 287 QNRRMKWKKENK 298
QNRRMKWKKE+K
Sbjct: 179 QNRRMKWKKEHK 190
>gi|395830950|ref|XP_003788575.1| PREDICTED: homeobox protein Hox-A7 [Otolemur garnettii]
gi|202070729|gb|ACH95317.1| homeobox A7 (predicted) [Otolemur garnettii]
Length = 226
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/72 (91%), Positives = 69/72 (95%), Gaps = 1/72 (1%)
Query: 228 LYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWMRS +RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF
Sbjct: 119 IYPWMRSSGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 178
Query: 287 QNRRMKWKKENK 298
QNRRMKWKKE+K
Sbjct: 179 QNRRMKWKKEHK 190
>gi|6918885|emb|CAA59270.1| HOX 1.1 (A7) [Homo sapiens]
Length = 229
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/72 (91%), Positives = 69/72 (95%), Gaps = 1/72 (1%)
Query: 228 LYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWMRS +RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF
Sbjct: 118 IYPWMRSSGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 177
Query: 287 QNRRMKWKKENK 298
QNRRMKWKKE+K
Sbjct: 178 QNRRMKWKKEHK 189
>gi|306878|gb|AAA36003.1| homeobox c1 protein [Homo sapiens]
Length = 217
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/95 (71%), Positives = 76/95 (80%), Gaps = 1/95 (1%)
Query: 206 SQPPNQPPNQQPNNTSASLPSPLYPWMRSQ-FERKRGRQTYTRYQTLELEKEFHFNRYLT 264
S Q+ ++ +A +YP MRS +RKRGRQTYTRYQTLELEKEFH+NRYLT
Sbjct: 104 SAKAAGAKEQRDSDLAAESNFRIYPSMRSSGTDRKRGRQTYTRYQTLELEKEFHYNRYLT 163
Query: 265 RRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKS 299
RRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK+
Sbjct: 164 RRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKT 198
>gi|296209379|ref|XP_002751497.1| PREDICTED: homeobox protein Hox-A7 [Callithrix jacchus]
gi|167427229|gb|ABZ80210.1| homeobox A7 (predicted) [Callithrix jacchus]
Length = 230
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/72 (91%), Positives = 69/72 (95%), Gaps = 1/72 (1%)
Query: 228 LYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWMRS +RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF
Sbjct: 119 IYPWMRSSGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 178
Query: 287 QNRRMKWKKENK 298
QNRRMKWKKE+K
Sbjct: 179 QNRRMKWKKEHK 190
>gi|149705657|ref|XP_001499535.1| PREDICTED: homeobox protein Hox-A7-like [Equus caballus]
Length = 234
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/72 (91%), Positives = 69/72 (95%), Gaps = 1/72 (1%)
Query: 228 LYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWMRS +RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF
Sbjct: 119 IYPWMRSSGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 178
Query: 287 QNRRMKWKKENK 298
QNRRMKWKKE+K
Sbjct: 179 QNRRMKWKKEHK 190
>gi|148666245|gb|EDK98661.1| homeobox A7, isoform CRA_b [Mus musculus]
Length = 223
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/90 (77%), Positives = 75/90 (83%), Gaps = 2/90 (2%)
Query: 228 LYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWMRS +RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF
Sbjct: 112 IYPWMRSSGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 171
Query: 287 QNRRMKWKKENKSKDGGSDAG-SDITPATS 315
QNRRMKWKKE+K + A D P+ S
Sbjct: 172 QNRRMKWKKEHKDESQAPTAAPEDAVPSVS 201
>gi|184185536|gb|ACC68937.1| homeobox protein Hox-A7 (predicted) [Rhinolophus ferrumequinum]
Length = 232
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/72 (91%), Positives = 69/72 (95%), Gaps = 1/72 (1%)
Query: 228 LYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWMRS +RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF
Sbjct: 119 IYPWMRSSGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 178
Query: 287 QNRRMKWKKENK 298
QNRRMKWKKE+K
Sbjct: 179 QNRRMKWKKEHK 190
>gi|6513841|gb|AAD01939.2| homeobox protein HOXA7 [Homo sapiens]
Length = 230
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 65/72 (90%), Positives = 69/72 (95%), Gaps = 1/72 (1%)
Query: 228 LYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWMRS +RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQ+KIWF
Sbjct: 119 IYPWMRSSGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQVKIWF 178
Query: 287 QNRRMKWKKENK 298
QNRRMKWKKE+K
Sbjct: 179 QNRRMKWKKEHK 190
>gi|281182594|ref|NP_001162369.1| homeobox protein Hox-A7 [Papio anubis]
gi|160904220|gb|ABX52204.1| homeobox A7 (predicted) [Papio anubis]
gi|355747754|gb|EHH52251.1| hypothetical protein EGM_12667 [Macaca fascicularis]
Length = 230
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 66/72 (91%), Positives = 69/72 (95%), Gaps = 1/72 (1%)
Query: 228 LYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWMRS +RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF
Sbjct: 119 IYPWMRSSGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 178
Query: 287 QNRRMKWKKENK 298
QNRRMKWKKE+K
Sbjct: 179 QNRRMKWKKEHK 190
>gi|345780283|ref|XP_864678.2| PREDICTED: homeobox protein Hox-A7 isoform 5 [Canis lupus
familiaris]
Length = 239
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 66/72 (91%), Positives = 69/72 (95%), Gaps = 1/72 (1%)
Query: 228 LYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWMRS +RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF
Sbjct: 119 IYPWMRSSGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 178
Query: 287 QNRRMKWKKENK 298
QNRRMKWKKE+K
Sbjct: 179 QNRRMKWKKEHK 190
>gi|284005071|ref|NP_001164873.1| homeobox protein Hox-A7 [Oryctolagus cuniculus]
gi|217418309|gb|ACK44311.1| homeobox A7 (predicted) [Oryctolagus cuniculus]
Length = 235
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 66/72 (91%), Positives = 69/72 (95%), Gaps = 1/72 (1%)
Query: 228 LYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWMRS +RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF
Sbjct: 119 IYPWMRSSGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 178
Query: 287 QNRRMKWKKENK 298
QNRRMKWKKE+K
Sbjct: 179 QNRRMKWKKEHK 190
>gi|12621987|gb|AAB91389.2| antennapedia [Ethmostigmus rubripes]
Length = 76
Score = 144 bits (364), Expect = 4e-32, Method: Composition-based stats.
Identities = 66/73 (90%), Positives = 68/73 (93%), Gaps = 2/73 (2%)
Query: 238 RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 297
RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN
Sbjct: 1 RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 60
Query: 298 KSKDGGSDAGSDI 310
K+K G AG D+
Sbjct: 61 KAKLEG--AGGDL 71
>gi|385654491|gb|AFI61990.1| Hox-B6b [Anguilla japonica]
Length = 227
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 72/119 (60%), Positives = 82/119 (68%), Gaps = 13/119 (10%)
Query: 188 QHHQVVVNHQQTPPNQPPSQPPNQPPNQQPNNTSASLPSPLYPWMR------SQF--ERK 239
+ H +V+N +Q S P Q + + +P+YPWM+ F +
Sbjct: 96 EEHSLVLNQ-----DQRKSDCPGQNKSIFTDGDEMKSSAPVYPWMQRMNSCNGTFGNTGR 150
Query: 240 RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK
Sbjct: 151 RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 209
>gi|332692498|gb|AEE90177.1| Homeobox B6b [Anguilla anguilla]
Length = 227
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 72/119 (60%), Positives = 82/119 (68%), Gaps = 13/119 (10%)
Query: 188 QHHQVVVNHQQTPPNQPPSQPPNQPPNQQPNNTSASLPSPLYPWMR------SQF--ERK 239
+ H +V+N +Q S P Q + + +P+YPWM+ F +
Sbjct: 96 EEHSLVLNQ-----DQRKSDCPGQNKSIFTDGDEMKSSAPVYPWMQRMNSCNGTFGNTGR 150
Query: 240 RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK
Sbjct: 151 RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 209
>gi|28629629|gb|AAO43020.1| HoxA7 [Latimeria menadoensis]
Length = 140
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 67/81 (82%), Positives = 73/81 (90%), Gaps = 1/81 (1%)
Query: 228 LYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWMRS ++KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF
Sbjct: 48 IYPWMRSSGPDKKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 107
Query: 287 QNRRMKWKKENKSKDGGSDAG 307
QNRRMKWKKE+K + S+ G
Sbjct: 108 QNRRMKWKKEHKEDNFTSNNG 128
>gi|4388694|emb|CAA30123.1| unnamed protein product [Xenopus laevis]
Length = 102
Score = 144 bits (362), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 67/80 (83%), Positives = 72/80 (90%), Gaps = 1/80 (1%)
Query: 228 LYPWMRSQ-FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWMRS +RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAH LCLTERQIKIWF
Sbjct: 9 IYPWMRSAGSDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHTLCLTERQIKIWF 68
Query: 287 QNRRMKWKKENKSKDGGSDA 306
QNRRMKWKKENK+ S++
Sbjct: 69 QNRRMKWKKENKASSPSSNS 88
>gi|74203747|dbj|BAE23104.1| unnamed protein product [Mus musculus]
Length = 217
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 67/91 (73%), Positives = 76/91 (83%), Gaps = 1/91 (1%)
Query: 215 QQPNNTSASLPSPLYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAH 273
Q+ ++ +A +YPWMRS +RKRGRQT TRYQTLELEKEFH+NRYLTRRRRIEIAH
Sbjct: 113 QRDSDLAAESNFRIYPWMRSSGPDRKRGRQTSTRYQTLELEKEFHYNRYLTRRRRIEIAH 172
Query: 274 ALCLTERQIKIWFQNRRMKWKKENKSKDGGS 304
LCLTERQIKIWFQNRRMKWKKENK+ G+
Sbjct: 173 TLCLTERQIKIWFQNRRMKWKKENKTSGPGT 203
>gi|123241|sp|P24061.1|HXA7_COTJA RecName: Full=Homeobox protein Hox-A7; AltName: Full=Quox-1
gi|213618|gb|AAA49501.1| homeobox gene [Coturnix coturnix]
Length = 242
Score = 143 bits (361), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 66/80 (82%), Positives = 71/80 (88%), Gaps = 1/80 (1%)
Query: 228 LYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWMRS +RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIE AHALCLTERQIKIWF
Sbjct: 118 IYPWMRSSGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEYAHALCLTERQIKIWF 177
Query: 287 QNRRMKWKKENKSKDGGSDA 306
QNRRMKWKKE+K + + A
Sbjct: 178 QNRRMKWKKEHKEESSSTPA 197
>gi|443689509|gb|ELT91883.1| hypothetical protein CAPTEDRAFT_94879 [Capitella teleta]
Length = 89
Score = 143 bits (361), Expect = 9e-32, Method: Composition-based stats.
Identities = 69/73 (94%), Positives = 71/73 (97%), Gaps = 2/73 (2%)
Query: 228 LYPWMRSQF--ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIW 285
+YPWMRSQF ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIW
Sbjct: 1 MYPWMRSQFGPERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIW 60
Query: 286 FQNRRMKWKKENK 298
FQNRRMKWKKEN+
Sbjct: 61 FQNRRMKWKKENR 73
>gi|8815563|gb|AAB19469.2| TATAA binding protein [Homo sapiens]
Length = 120
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/95 (70%), Positives = 75/95 (78%), Gaps = 1/95 (1%)
Query: 206 SQPPNQPPNQQPNNTSASLPSPLYPWMRSQ-FERKRGRQTYTRYQTLELEKEFHFNRYLT 264
S Q+ ++ +A +YPWMRS +RKRGRQTYTRYQTLELE EFH+NRYLT
Sbjct: 7 SAKAGGAKEQRDSDFAAESNFRIYPWMRSSGTDRKRGRQTYTRYQTLELENEFHYNRYLT 66
Query: 265 RRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKS 299
RRRRIEIAHALCLTERQIKIWFQNRRMKWK ENK+
Sbjct: 67 RRRRIEIAHALCLTERQIKIWFQNRRMKWKNENKT 101
>gi|154183798|gb|ABS70741.1| Hoxb5a [Haplochromis burtoni]
Length = 309
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 107/312 (34%), Positives = 135/312 (43%), Gaps = 28/312 (8%)
Query: 1 MSSYFANSYMPDIKNGGVLPPEHHQQHHYGATVLPQNNGVEDPSMYDPRQVHHYGQVPNN 60
MSSYF NS+ NG PE+ Q +YG + N G D + +
Sbjct: 1 MSSYFVNSFSGRYPNG----PEY-QLLNYGGSSGAMNGGT----YRDSSSATMHPATGSY 51
Query: 61 GQPVHGMPYPRFPPYDRMDIRNAAYYGAHEGGMEQYPRPDSPSMGHMGPQNGHQTPVVYA 120
G +GM +R N+ A DS G P G + P +
Sbjct: 52 GYSYNGMD---LTVTNRGGGTNSTA-NAGGHYGGGSVGGDSRGFGSPAPDRGFRQP---S 104
Query: 121 SCKLQAAVGNGIIPGPESPNDLVDPTLNNHHHHQHHHMNHHPHPHPQQQQPQQPPPQHMM 180
SC L +A + + PG ES + +++ +
Sbjct: 105 SCSLASAADSLLSPGNESTKLGARSSSPRSDQAGSGNLSSPNLSSASSTGGGGTVQRFTE 164
Query: 181 YAQQPPPQH---HQVVVNHQQTPPNQPPSQPPNQPPNQQPNNTSASLPSP-LYPWMRSQF 236
P H +H PP + + P NT + +P ++PWMR
Sbjct: 165 LDDASPETEDLQHNRDTSHASNPPPRTGHKQEGGPTGSAAGNTGSEAQTPQIFPWMRKLH 224
Query: 237 --------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQN 288
+ KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQN
Sbjct: 225 ISHDMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQN 284
Query: 289 RRMKWKKENKSK 300
RRMKWKK+NK K
Sbjct: 285 RRMKWKKDNKLK 296
>gi|387598538|gb|AFJ91925.1| homeodomain transcription factor Lox5 [Platynereis dumerilii]
Length = 321
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 118/307 (38%), Positives = 139/307 (45%), Gaps = 88/307 (28%)
Query: 1 MSSYFANSYMPDIKNGGVLPPEHHQQHHYGATVLPQNNGVEDPSMYDPRQV---HHYGQV 57
MS+Y+ N ++ NG Q HY A+ + G D S + + +
Sbjct: 25 MSTYYGNILPTNLSNG-------TSQEHYMAS----SEGKFDASYFSGQGMGFEAAAAAA 73
Query: 58 PNNGQPVHGMPYPRFPPYDRMDIRNAAYYGAHEGGMEQYPRPDSPSMGHMGPQNGHQTPV 117
+GQ H YPRFPPYDR+DIR SMG G TP
Sbjct: 74 AGDGQHPH---YPRFPPYDRLDIRPIT------------------SMG-----KGAYTP- 106
Query: 118 VYASCKLQAAVGNGIIPGPESPNDLVDPTLNNHHHHQHHHMNHHPHPHPQQQQPQQPPPQ 177
SP LNN+ HH+ + P ++ + PP
Sbjct: 107 --------------------SPAHYQASGLNNYQ--SHHNGQYSP-----EEMGCKVPPD 139
Query: 178 HMMYAQQPPPQHHQVVVNHQQTPPNQPPSQPPNQPPNQQPNNTSASLPSPLYPWMR---- 233
M P HH P P + P QQ N P+YPWMR
Sbjct: 140 GM------PSPHHASPTGQAMVSPFAPNNMP-GLVNGQQAQNI------PIYPWMRPMSG 186
Query: 234 ---SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRR 290
FE+KR RQTYTRYQTLELEKEFH+NRYLTRRRRIEIAHAL LTERQIKIWFQNRR
Sbjct: 187 VAEFGFEQKRTRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALGLTERQIKIWFQNRR 246
Query: 291 MKWKKEN 297
MKWKKEN
Sbjct: 247 MKWKKEN 253
>gi|345312910|ref|XP_001511383.2| PREDICTED: homeobox protein Hox-B7-like [Ornithorhynchus anatinus]
Length = 222
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 66/77 (85%), Positives = 70/77 (90%), Gaps = 5/77 (6%)
Query: 228 LYPWMRSQ-FERKRGRQTYTRYQTLEL----EKEFHFNRYLTRRRRIEIAHALCLTERQI 282
+YPWMRS +RKRGRQTYTRYQTLEL EKEFH+NRYLTRRRRIEIAHALCLTERQI
Sbjct: 127 IYPWMRSTGTDRKRGRQTYTRYQTLELGEGLEKEFHYNRYLTRRRRIEIAHALCLTERQI 186
Query: 283 KIWFQNRRMKWKKENKS 299
KIWFQNRRMKWKKENK+
Sbjct: 187 KIWFQNRRMKWKKENKT 203
>gi|11100|emb|CAA49682.1| Antp [Artemia franciscana]
Length = 80
Score = 142 bits (359), Expect = 2e-31, Method: Composition-based stats.
Identities = 64/67 (95%), Positives = 65/67 (97%), Gaps = 1/67 (1%)
Query: 238 RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 297
RKRGRQTYTR+QTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN
Sbjct: 1 RKRGRQTYTRFQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 60
Query: 298 KSK-DGG 303
KSK D G
Sbjct: 61 KSKVDSG 67
>gi|449277037|gb|EMC85344.1| Homeobox protein Hox-B6 [Columba livia]
Length = 213
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 65/78 (83%), Positives = 70/78 (89%), Gaps = 5/78 (6%)
Query: 226 SPLYPWMRSQF-----ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTER 280
+P+YPWM+ +RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAH+LCLTER
Sbjct: 118 APVYPWMQRMNSCNSPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHSLCLTER 177
Query: 281 QIKIWFQNRRMKWKKENK 298
QIKIWFQNRRMKWKKENK
Sbjct: 178 QIKIWFQNRRMKWKKENK 195
>gi|255755647|dbj|BAH96549.1| homeodomain transcription factor [Balanoglossus simodensis]
Length = 243
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/117 (58%), Positives = 82/117 (70%), Gaps = 5/117 (4%)
Query: 189 HHQVVVNHQQTPPNQPPSQPPNQPPNQQPNNTSASLPSPLYPWMRSQ----FERKRGRQT 244
H+ + N Q++ + S + + ++ + +YPWMRS +++RGRQT
Sbjct: 100 HYDLSCNSQRSKES-VESHEQSLKKEKDASDDGGKTSTVIYPWMRSNNYCGSDQRRGRQT 158
Query: 245 YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSKD 301
YTRYQTLELEKEFHFNRYLTRRRRIEIAHAL LTERQIKIWFQNRRMKWKKE K D
Sbjct: 159 YTRYQTLELEKEFHFNRYLTRRRRIEIAHALGLTERQIKIWFQNRRMKWKKEQKVGD 215
>gi|348517817|ref|XP_003446429.1| PREDICTED: homeobox protein Hox-B5a-like [Oreochromis niloticus]
Length = 309
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 108/313 (34%), Positives = 136/313 (43%), Gaps = 30/313 (9%)
Query: 1 MSSYFANSYMPDIKNGGVLPPEHHQQHHYGATVLPQNNGVEDPSMYDPRQVHHYGQVPNN 60
MSSYF NS+ NG PE+ Q +YG + N G D + +
Sbjct: 1 MSSYFVNSFSGRYPNG----PEY-QLLNYGGSSGAMNGGT----YRDSSSATMHPATGSY 51
Query: 61 GQPVHGMPYPRFPPYDRMDIRNA-AYYGAHEGGMEQYPRPDSPSMGHMGPQNGHQTPVVY 119
G +GM +R N+ A G H G DS G P G +
Sbjct: 52 GYSYNGMD---LTVTNRGGGSNSTANAGGHFG--SGSVGGDSRGFGSPAPDRGFRQQ--- 103
Query: 120 ASCKLQAAVGNGIIPGPESPNDLVDPTLNNHHHHQHHHMNHHPHPHPQQQQPQQPPPQHM 179
+SC L + + + PG ES + +++ +
Sbjct: 104 SSCSLASVADSLLSPGNESTKLGARSSSPRSDQAGSGNLSSPNLSSASSTGGGGTVQRFT 163
Query: 180 MYAQQPPPQH---HQVVVNHQQTPPNQPPSQPPNQPPNQQPNNTSASLPSP-LYPWMRSQ 235
P H +H PP + + P NT + +P ++PWMR
Sbjct: 164 ELDDASPETEDLQHNRDTSHASNPPPRTGHKQEGGPTGSAAGNTGSEAQTPQIFPWMRKL 223
Query: 236 F--------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQ 287
+ KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQ
Sbjct: 224 HISHDMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQ 283
Query: 288 NRRMKWKKENKSK 300
NRRMKWKK+NK K
Sbjct: 284 NRRMKWKKDNKLK 296
>gi|429510508|gb|AFZ94992.1| transcription factor Hox7 [Petromyzon marinus]
Length = 227
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 63/72 (87%), Positives = 67/72 (93%), Gaps = 3/72 (4%)
Query: 228 LYPWMRSQF---ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKI 284
+YPWMRS +R+RGRQTY+RYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKI
Sbjct: 140 IYPWMRSTAGSPDRRRGRQTYSRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKI 199
Query: 285 WFQNRRMKWKKE 296
WFQNRRMKWKKE
Sbjct: 200 WFQNRRMKWKKE 211
>gi|431909016|gb|ELK12607.1| Homeobox protein Hox-A7 [Pteropus alecto]
Length = 232
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 65/72 (90%), Positives = 68/72 (94%), Gaps = 1/72 (1%)
Query: 228 LYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWMRS +RKRGRQTYTRYQTLELEKEFHFNRYL RRRRIEIAHALCLTERQIKIWF
Sbjct: 119 IYPWMRSSGPDRKRGRQTYTRYQTLELEKEFHFNRYLPRRRRIEIAHALCLTERQIKIWF 178
Query: 287 QNRRMKWKKENK 298
QNRRMKWKKE+K
Sbjct: 179 QNRRMKWKKEHK 190
>gi|74267509|dbj|BAE44253.1| hoxA5a [Oryzias latipes]
gi|83016929|dbj|BAE53461.1| hoxA5a [Oryzias latipes]
Length = 279
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 107/311 (34%), Positives = 134/311 (43%), Gaps = 55/311 (17%)
Query: 1 MSSYFANSYMPDIKNGGVLPPEHHQQHHYGATVLPQNNGVEDPSMYDPRQVHHYGQVPNN 60
MSSYF NS+ NG Q H+YG + SM+ R + YG
Sbjct: 1 MSSYFVNSFCGRYPNGADF-----QLHNYGDHSSANEQYRDSASMHSSR--YGYG----- 48
Query: 61 GQPVHGMPYPRFPPYDRMDIRNAAYYGAHEGGMEQYPRPDSPSMGHMGPQNGHQTPVVYA 120
Y+ MD+ G H G E R S H + PV Y+
Sbjct: 49 --------------YNGMDLTVGRGAGGHFVGSE---RTAGYSPSHSAATSASVEPVRYS 91
Query: 121 SCKLQAAVGNGIIPGPESPNDLVDPTLNNHHHHQHHHMNHHPHPHPQQQQPQQPPPQHMM 180
+ ++ GN + + + + Q Q P ++
Sbjct: 92 HSQSTSSAGN---------------SSLSPPPDPLPCSSVASSSPVAEAQSQHRPVKNSS 136
Query: 181 YAQQPPPQHHQVVVNHQQTPPNQP--PSQPPNQPPNQQPNNTSASLPSPLYPWMR----- 233
AQ ++++ P + P+ P N S S +YPWMR
Sbjct: 137 AAQCSSSNGGALLLSRDCVSKASPLEDEKAAGSAPS-TPQNASDSAQPQIYPWMRKLHIS 195
Query: 234 ---SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRR 290
S E KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+ERQIKIWFQNRR
Sbjct: 196 HDISGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRR 255
Query: 291 MKWKKENKSKD 301
MKWKK+NK K
Sbjct: 256 MKWKKDNKLKS 266
>gi|400180326|gb|AFP73294.1| Hoxa5alpha [Polyodon spathula]
Length = 275
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 72/121 (59%), Positives = 78/121 (64%), Gaps = 11/121 (9%)
Query: 199 TPPNQPPSQPPNQPPNQQPNNTSASLPSPLYPWMRSQF---------ERKRGRQTYTRYQ 249
T + P S Q +Q N S S +YPWMR E KR R YTRYQ
Sbjct: 154 TEDDTPASS--GQTSSQNGQNASESSQPQIYPWMRKLHMSHDSMAGPEGKRARTAYTRYQ 211
Query: 250 TLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSKDGGSDAGSD 309
TLELEKEFHFNRYLTRRRRIEIAHALCL+ERQIKIWFQNRRMKWKK+NK K A D
Sbjct: 212 TLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNKLKSMSMAAAGD 271
Query: 310 I 310
+
Sbjct: 272 V 272
>gi|14010311|gb|AAK51946.1|AF362091_1 antennapedia 1 [Lithobius forficatus]
Length = 79
Score = 140 bits (354), Expect = 5e-31, Method: Composition-based stats.
Identities = 68/80 (85%), Positives = 70/80 (87%), Gaps = 2/80 (2%)
Query: 238 RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 297
RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN
Sbjct: 1 RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 60
Query: 298 KSKDGGSDAGSDITPATSPQ 317
K+K G AG D+ A Q
Sbjct: 61 KAKLEG--AGGDLCLAGLEQ 78
>gi|432881691|ref|XP_004073904.1| PREDICTED: homeobox protein Hox-A5-like [Oryzias latipes]
Length = 302
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 107/311 (34%), Positives = 134/311 (43%), Gaps = 55/311 (17%)
Query: 1 MSSYFANSYMPDIKNGGVLPPEHHQQHHYGATVLPQNNGVEDPSMYDPRQVHHYGQVPNN 60
MSSYF NS+ NG Q H+YG + SM+ R + YG
Sbjct: 24 MSSYFVNSFCGRYPNGADF-----QLHNYGDHSSANEQYRDSASMHSSR--YGYG----- 71
Query: 61 GQPVHGMPYPRFPPYDRMDIRNAAYYGAHEGGMEQYPRPDSPSMGHMGPQNGHQTPVVYA 120
Y+ MD+ G H G E R S H + PV Y+
Sbjct: 72 --------------YNGMDLTVGRGAGGHFVGSE---RTAGYSPSHSAATSASVEPVRYS 114
Query: 121 SCKLQAAVGNGIIPGPESPNDLVDPTLNNHHHHQHHHMNHHPHPHPQQQQPQQPPPQHMM 180
+ ++ GN + + + + Q Q P ++
Sbjct: 115 HSQSTSSAGN---------------SSLSPPPDPLPCSSVASSSPVAEAQSQHRPVKNSS 159
Query: 181 YAQQPPPQHHQVVVNHQQTPPNQP--PSQPPNQPPNQQPNNTSASLPSPLYPWMR----- 233
AQ ++++ P + P+ P N S S +YPWMR
Sbjct: 160 AAQCSSSNGGALLLSRDCVSKASPLEDEKAAGSAPS-TPQNASDSAQPQIYPWMRKLHIS 218
Query: 234 ---SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRR 290
S E KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+ERQIKIWFQNRR
Sbjct: 219 HDISGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRR 278
Query: 291 MKWKKENKSKD 301
MKWKK+NK K
Sbjct: 279 MKWKKDNKLKS 289
>gi|254692760|dbj|BAH23875.2| transcription factor Hox6 [Balanoglossus misakiensis]
Length = 240
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 64/82 (78%), Positives = 69/82 (84%), Gaps = 4/82 (4%)
Query: 225 PSPLYPWMRSQ----FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTER 280
+ +YPWMRS +++RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHAL LTER
Sbjct: 134 STVIYPWMRSNNYCGSDQRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALGLTER 193
Query: 281 QIKIWFQNRRMKWKKENKSKDG 302
QIKIWFQNRRMKWKKE K D
Sbjct: 194 QIKIWFQNRRMKWKKEQKMTDS 215
>gi|38016607|gb|AAR07637.1| transcription factor Hox6 [Ptychodera flava]
Length = 239
Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 64/81 (79%), Positives = 69/81 (85%), Gaps = 4/81 (4%)
Query: 225 PSPLYPWMRSQ----FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTER 280
+ +YPWMRS +++RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHAL LTER
Sbjct: 133 STVIYPWMRSNNYCGSDQRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALGLTER 192
Query: 281 QIKIWFQNRRMKWKKENKSKD 301
QIKIWFQNRRMKWKKE K D
Sbjct: 193 QIKIWFQNRRMKWKKEQKMSD 213
>gi|220898194|gb|ACL81449.1| HoxB6 [Latimeria menadoensis]
Length = 222
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 66/84 (78%), Positives = 70/84 (83%), Gaps = 9/84 (10%)
Query: 224 LPSPLYPWMR-------SQF--ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHA 274
+P+YPWM+ S F +RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHA
Sbjct: 121 CSTPVYPWMQRMNSCTGSAFGPNGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHA 180
Query: 275 LCLTERQIKIWFQNRRMKWKKENK 298
LCLTERQIKIWFQNRRMKWKKENK
Sbjct: 181 LCLTERQIKIWFQNRRMKWKKENK 204
>gi|259013408|ref|NP_001158411.1| homeobox 6 [Saccoglossus kowalevskii]
gi|116574504|gb|ABK00020.1| hox 6 [Saccoglossus kowalevskii]
Length = 242
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 65/84 (77%), Positives = 72/84 (85%), Gaps = 6/84 (7%)
Query: 225 PSPLYPWMRSQ----FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTER 280
P+ +YPWMRS +++RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAH L LTER
Sbjct: 131 PTIIYPWMRSNNYCGSDQRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHTLGLTER 190
Query: 281 QIKIWFQNRRMKWKKENKSKDGGS 304
QIKIWFQNRRMKWKKE K+ GG+
Sbjct: 191 QIKIWFQNRRMKWKKEQKT--GGA 212
>gi|158702290|gb|ABW77487.1| homeobox protein HoxB6ba [Salmo salar]
Length = 223
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/118 (60%), Positives = 79/118 (66%), Gaps = 11/118 (9%)
Query: 192 VVVNHQQTPPNQPPSQPPNQPPNQQPNNTSA--SLPSPLYPWMRSQ---------FERKR 240
N ++ P Q ++ Q N T+A S LYPWM+ +R
Sbjct: 89 AFANREEQPLFVTQDQRKSECLEQNVNITTAVDDKSSLLYPWMQRMNSCTAGTLGSSGRR 148
Query: 241 GRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
GRQTYTRYQTLELEKEFHFNRYLTRRRRIEI+HALCLTERQIKIWFQNRRMKWKKENK
Sbjct: 149 GRQTYTRYQTLELEKEFHFNRYLTRRRRIEISHALCLTERQIKIWFQNRRMKWKKENK 206
>gi|74267539|dbj|BAE44268.1| hoxB5a [Oryzias latipes]
gi|83016948|dbj|BAE53475.1| hoxB5a [Oryzias latipes]
Length = 311
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/318 (33%), Positives = 138/318 (43%), Gaps = 39/318 (12%)
Query: 1 MSSYFANSYMPDIKNGGVLPPEHHQQHHYGATVLPQNNGVEDPSMYDPRQVHHYGQVPNN 60
MSSYF NS +G +Q +YG + + D +HH+ P +
Sbjct: 1 MSSYFVNSLSGRYPSG-----SDYQLLNYGG-----GGAMNSGTFRDSATMHHH--APGS 48
Query: 61 -GQPVHGMPYPRFPPYDRMDIRNAAYYGAHEGGMEQYPRPDSPSMGHMGPQNGHQTPVVY 119
G +G+ + N G H GG DS G + + G + P
Sbjct: 49 YGYSYNGIDLTVTSRGE--GTGNTVNTGGHFGGG---TLTDSRGFGSVSAERGFRQP--- 100
Query: 120 ASCKLQAAVGNGIIPGPESPNDLVDPTLNNHHHHQHHHMNHHPHPHPQQQQPQQPPPQHM 179
+SC L +A + + PG + + L + H P+ Q
Sbjct: 101 SSCSLASAADSLLSPGTD-KSKLAAQGSSPHAEQTGSGSLCSPNLSSSSGSSVGAAAQRF 159
Query: 180 MYAQQPPPQHHQVVVNHQQTPPNQPPSQPPNQPPNQQ---PNNTSASLPSP------LYP 230
+ ++ N PP+ +QP Q P T+ ++P
Sbjct: 160 AELDDALTETEELQHTDAGRGNNPPPTSGHSQPAKTQEGEPAGTAGGGTDSDPHTPQIFP 219
Query: 231 WMRSQF--------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQI 282
WMR + KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQI
Sbjct: 220 WMRKLHISHDMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQI 279
Query: 283 KIWFQNRRMKWKKENKSK 300
KIWFQNRRMKWKK+NK K
Sbjct: 280 KIWFQNRRMKWKKDNKVK 297
>gi|88604716|gb|ABD46729.1| homeobox protein sex comb reduced [Nymphon gracile]
Length = 274
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/99 (66%), Positives = 75/99 (75%), Gaps = 10/99 (10%)
Query: 210 NQPPNQQPNNTSASLPSPLYPWMR----------SQFERKRGRQTYTRYQTLELEKEFHF 259
N P N Q + +++ P +YPWMR + E KR R +YTRYQTLELEKEFHF
Sbjct: 151 NSPQNTQDSKSTSHNPPQIYPWMRKVHIGQNGMSNGMETKRQRTSYTRYQTLELEKEFHF 210
Query: 260 NRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
NRYLTRRRRIEIAHALCL+ERQIKIWFQNRRMKWKKE+K
Sbjct: 211 NRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKEHK 249
>gi|348522805|ref|XP_003448914.1| PREDICTED: homeobox protein Hox-A5-like [Oreochromis niloticus]
Length = 281
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/113 (61%), Positives = 76/113 (67%), Gaps = 17/113 (15%)
Query: 197 QQTPPNQPPSQPPNQPPNQQPNNTSASLPSPLYPWMR--------SQFERKRGRQTYTRY 248
++ P P+ P N + QP +YPWMR S E KR R YTRY
Sbjct: 165 EEKPAGSAPTTPQNVTDSTQPQ---------IYPWMRKLHISHDLSGPEGKRARTAYTRY 215
Query: 249 QTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSKD 301
QTLELEKEFHFNRYLTRRRRIEIAHALCL+ERQIKIWFQNRRMKWKK+NK K
Sbjct: 216 QTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNKLKS 268
>gi|255755645|dbj|BAH96548.1| homeodomain transcription factor [Balanoglossus simodensis]
Length = 243
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/148 (49%), Positives = 84/148 (56%), Gaps = 18/148 (12%)
Query: 172 QQPPPQHMMYAQQPPPQHHQVVVNHQQTPPNQPPSQPP----------NQPPNQQPNNTS 221
QQPP + + P + + N + T N P + P N N +
Sbjct: 69 QQPPVSNRLTHNTPTHTSYSIAANMETTARNTPSTSPSLENGLGNGMNGTEKNTSSNAVN 128
Query: 222 ASLPSPLYPWMRSQ--------FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAH 273
+ S +YPWMR E KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAH
Sbjct: 129 SQSDSMVYPWMRKMHMSSGANGMEAKRSRTAYTRYQTLELEKEFHFNRYLTRRRRIEIAH 188
Query: 274 ALCLTERQIKIWFQNRRMKWKKENKSKD 301
AL L+ERQIKIWFQNRRMKWKKE+ K
Sbjct: 189 ALGLSERQIKIWFQNRRMKWKKEHNVKS 216
>gi|348517813|ref|XP_003446427.1| PREDICTED: homeobox protein Hox-B6a-like [Oreochromis niloticus]
Length = 284
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/84 (78%), Positives = 69/84 (82%), Gaps = 8/84 (9%)
Query: 223 SLPSPLYPWMR------SQFER--KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHA 274
S P+YPWM+ F +RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHA
Sbjct: 175 SASVPIYPWMQRMNACNGTFSSPGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHA 234
Query: 275 LCLTERQIKIWFQNRRMKWKKENK 298
LCLTERQIKIWFQNRRMKWKKENK
Sbjct: 235 LCLTERQIKIWFQNRRMKWKKENK 258
>gi|327275816|ref|XP_003222668.1| PREDICTED: homeobox protein Hox-B6-like [Anolis carolinensis]
Length = 231
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/82 (80%), Positives = 70/82 (85%), Gaps = 9/82 (10%)
Query: 226 SPLYPWMR-------SQF--ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALC 276
+P+YPWM+ S F +RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALC
Sbjct: 132 TPVYPWMQRMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALC 191
Query: 277 LTERQIKIWFQNRRMKWKKENK 298
LTERQIKIWFQNRRMKWKKENK
Sbjct: 192 LTERQIKIWFQNRRMKWKKENK 213
>gi|154183797|gb|ABS70740.1| Hoxb6a [Haplochromis burtoni]
Length = 284
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/84 (78%), Positives = 69/84 (82%), Gaps = 8/84 (9%)
Query: 223 SLPSPLYPWMR------SQFER--KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHA 274
S P+YPWM+ F +RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHA
Sbjct: 175 SASVPIYPWMQRMNACNGTFSSPGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHA 234
Query: 275 LCLTERQIKIWFQNRRMKWKKENK 298
LCLTERQIKIWFQNRRMKWKKENK
Sbjct: 235 LCLTERQIKIWFQNRRMKWKKENK 258
>gi|213513139|ref|NP_001133052.1| homeobox protein HoxB6ab [Salmo salar]
gi|157816107|gb|ABV82072.1| homeobox protein HoxB6ab [Salmo salar]
gi|158702279|gb|ABW77477.1| homeobox protien HoxB6ab [Salmo salar]
Length = 227
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/121 (58%), Positives = 85/121 (70%), Gaps = 17/121 (14%)
Query: 188 QHHQVVV--NHQQTPPNQPPSQPPNQPPNQQPNNTSASLPSPLYPWMR------SQFER- 238
+ H +V+ +H++T + +Q+P+ +P+YPWM+ F
Sbjct: 96 EEHSLVLSQDHRKTDCSGQNKSIFGDSEDQKPS-------TPVYPWMQRMNSCNGTFGNP 148
Query: 239 -KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 297
+RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN
Sbjct: 149 GRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 208
Query: 298 K 298
K
Sbjct: 209 K 209
>gi|14916601|sp|Q9PWD3.1|HXA5_MORSA RecName: Full=Homeobox protein Hox-A5
gi|5669604|gb|AAD46398.1|AF089743_4 homeodomain protein Hox-A5 [Morone saxatilis]
Length = 281
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/113 (60%), Positives = 75/113 (66%), Gaps = 17/113 (15%)
Query: 197 QQTPPNQPPSQPPNQPPNQQPNNTSASLPSPLYPWMRSQF--------ERKRGRQTYTRY 248
++ P P+ P N + QP +YPWMR E KR R YTRY
Sbjct: 165 EEKPAGSAPTTPQNVSDSTQPQ---------IYPWMRKLHINHDLAGPEGKRARTAYTRY 215
Query: 249 QTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSKD 301
QTLELEKEFHFNRYLTRRRRIEIAHALCL+ERQIKIWFQNRRMKWKK+NK K
Sbjct: 216 QTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNKLKS 268
>gi|410262404|gb|JAA19168.1| homeobox A6 [Pan troglodytes]
Length = 233
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/93 (72%), Positives = 72/93 (77%), Gaps = 9/93 (9%)
Query: 226 SPLYPWMRSQFER---------KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALC 276
SP+YPWM+ +RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALC
Sbjct: 134 SPVYPWMQRMNSCAGAVYGSHGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALC 193
Query: 277 LTERQIKIWFQNRRMKWKKENKSKDGGSDAGSD 309
LTERQIKIWFQNRRMKWKKENK + +G D
Sbjct: 194 LTERQIKIWFQNRRMKWKKENKLINSTQPSGED 226
>gi|158702267|gb|ABW77466.1| homeobox protein HoxB6aa [Salmo salar]
gi|221220700|gb|ACM09011.1| Homeobox protein Hox-B6a [Salmo salar]
Length = 227
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/130 (55%), Positives = 88/130 (67%), Gaps = 17/130 (13%)
Query: 188 QHHQVVV--NHQQTPPNQPPSQPPNQPPNQQPNNTSASLPSPLYPWMR------SQFER- 238
+ H +V+ +H++T + +Q+P+ +P+YPWM+ F
Sbjct: 96 EEHSLVLSQDHRKTDCSGQNKSIFGDSEDQKPS-------TPVYPWMQRMNSCNGTFGNP 148
Query: 239 -KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 297
+RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN
Sbjct: 149 GRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 208
Query: 298 KSKDGGSDAG 307
K + +G
Sbjct: 209 KLINSSQTSG 218
>gi|154183830|gb|ABS70770.1| Hoxa5a [Haplochromis burtoni]
Length = 281
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/113 (61%), Positives = 76/113 (67%), Gaps = 17/113 (15%)
Query: 197 QQTPPNQPPSQPPNQPPNQQPNNTSASLPSPLYPWMR--------SQFERKRGRQTYTRY 248
++ P P+ P N + QP +YPWMR S E KR R YTRY
Sbjct: 165 EEKPAGSAPTTPQNVTDSTQPQ---------IYPWMRKLHISHDLSGPEGKRARTAYTRY 215
Query: 249 QTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSKD 301
QTLELEKEFHFNRYLTRRRRIEIAHALCL+ERQIKIWFQNRRMKWKK+NK K
Sbjct: 216 QTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNKLKS 268
>gi|148226630|ref|NP_001090379.1| homeobox B6 [Xenopus laevis]
gi|116063408|gb|AAI23271.1| Hoxb6 protein [Xenopus laevis]
Length = 223
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/86 (75%), Positives = 71/86 (82%), Gaps = 9/86 (10%)
Query: 222 ASLPSPLYPWMR-------SQF--ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIA 272
A +P+YPWM+ S F +RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIA
Sbjct: 120 AKCATPVYPWMQRMNSCNSSMFGPSGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIA 179
Query: 273 HALCLTERQIKIWFQNRRMKWKKENK 298
H+LCLTERQIKIWFQNRRMKWKKE+K
Sbjct: 180 HSLCLTERQIKIWFQNRRMKWKKESK 205
>gi|255742446|gb|ACU32560.1| homeobox protein HoxB6 [Callorhinchus milii]
Length = 230
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/93 (72%), Positives = 73/93 (78%), Gaps = 9/93 (9%)
Query: 227 PLYPWMR-------SQFE--RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 277
P+YPWM+ S F +RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL
Sbjct: 132 PVYPWMQRMNSSGASAFNPNGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 191
Query: 278 TERQIKIWFQNRRMKWKKENKSKDGGSDAGSDI 310
TERQIKIWFQNRRMKWKKENK + +G +
Sbjct: 192 TERQIKIWFQNRRMKWKKENKLLNSSQLSGEET 224
>gi|14916602|sp|Q9PWD4.1|HXA7_MORSA RecName: Full=Homeobox protein Hox-A7
gi|5669603|gb|AAD46397.1|AF089743_3 homeodomain protein Hox-A7 [Morone saxatilis]
Length = 225
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/94 (70%), Positives = 77/94 (81%), Gaps = 4/94 (4%)
Query: 228 LYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWMR+ RKRGRQTY+RYQTLELEKEFHFNRYLTRRRRIEIAHALCL+ERQIKIWF
Sbjct: 115 MYPWMRASDPTRKRGRQTYSRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWF 174
Query: 287 QNRRMKWKKENKSKDGGSDAG---SDITPATSPQ 317
QNRRMKWKK++K + + +G DI P + +
Sbjct: 175 QNRRMKWKKDHKEEPVSTPSGEKDCDIQPVSEAE 208
>gi|47217000|emb|CAG01628.1| unnamed protein product [Tetraodon nigroviridis]
Length = 778
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/80 (81%), Positives = 68/80 (85%), Gaps = 8/80 (10%)
Query: 227 PLYPWMR------SQFER--KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
P+YPWM+ F +RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT
Sbjct: 674 PIYPWMQRMNACNGTFGSPGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 733
Query: 279 ERQIKIWFQNRRMKWKKENK 298
ERQIKIWFQNRRMKWKKENK
Sbjct: 734 ERQIKIWFQNRRMKWKKENK 753
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Query: 231 WMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKI 284
W+ ++ RK+ R YT+YQTLELEKEF FN YLTR RR E+A AL LTERQ I
Sbjct: 231 WLHARSSRKK-RCPYTKYQTLELEKEFLFNMYLTRDRRHEVARALNLTERQGCI 283
>gi|160421815|gb|ABX39492.1| AmphiHox8 [Branchiostoma floridae]
Length = 212
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/205 (43%), Positives = 111/205 (54%), Gaps = 34/205 (16%)
Query: 135 GPESPNDLVDPTLNNHHHHQHHHMNHHPHPHPQQQQPQQPPPQHMMYAQQPPPQHHQVVV 194
G P+ V+ T+ NHH + + + + +P + + P A H QV
Sbjct: 13 GETFPHAGVNSTVANHHPY---YSSWYGYPANFRTERDNVSPNCTYTAAAAVVNHGQVQD 69
Query: 195 NHQQTPPNQ---------PPSQPPNQPPNQQPNNTS------ASLPSPLYPWMRSQF-ER 238
N QTP N P + +P QQ T+ + L P YPWMR+ ER
Sbjct: 70 N--QTPENCCWNGQEQGVPSAMQQQRPSCQQEEKTATMGMAQSQLAIPFYPWMRTAGPER 127
Query: 239 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE-- 296
+RGRQTY+RYQTLELEKEFHFN+YLTRRRRIEIAHAL LTERQIKIWFQNRRMK KKE
Sbjct: 128 RRGRQTYSRYQTLELEKEFHFNKYLTRRRRIEIAHALGLTERQIKIWFQNRRMKLKKEAA 187
Query: 297 -----------NKSKDGGSDAGSDI 310
KS DG S+ ++
Sbjct: 188 MLCPPKAETETEKSSDGQSEKSEEV 212
>gi|115499494|gb|ABI98820.1| HOX-A5 [Dicentrarchus labrax]
Length = 281
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/113 (60%), Positives = 75/113 (66%), Gaps = 17/113 (15%)
Query: 197 QQTPPNQPPSQPPNQPPNQQPNNTSASLPSPLYPWMRSQF--------ERKRGRQTYTRY 248
++ P P+ P N + QP +YPWMR E KR R YTRY
Sbjct: 165 EEKPAGSAPTTPQNVSDSTQPQ---------IYPWMRKLHINHDLAGPEGKRARTAYTRY 215
Query: 249 QTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSKD 301
QTLELEKEFHFNRYLTRRRRIEIAHALCL+ERQIKIWFQNRRMKWKK+NK K
Sbjct: 216 QTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNKLKS 268
>gi|260835433|ref|XP_002612713.1| hypothetical protein BRAFLDRAFT_229246 [Branchiostoma floridae]
gi|229298092|gb|EEN68722.1| hypothetical protein BRAFLDRAFT_229246 [Branchiostoma floridae]
Length = 76
Score = 139 bits (349), Expect = 2e-30, Method: Composition-based stats.
Identities = 68/76 (89%), Positives = 72/76 (94%), Gaps = 1/76 (1%)
Query: 224 LPSPLYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQI 282
+ +P+YPWMRS ERKRGRQTYTRYQTLELEKEFHFN+YLTRRRRIEIAHALCLTERQI
Sbjct: 1 MTTPIYPWMRSTAPERKRGRQTYTRYQTLELEKEFHFNKYLTRRRRIEIAHALCLTERQI 60
Query: 283 KIWFQNRRMKWKKENK 298
KIWFQNRRMKWKKENK
Sbjct: 61 KIWFQNRRMKWKKENK 76
>gi|14916595|sp|Q9IA23.1|HXA5_HETFR RecName: Full=Homeobox protein Hox-A5
gi|7271832|gb|AAF44643.1|AF224262_5 HoxA5 [Heterodontus francisci]
Length = 275
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/111 (61%), Positives = 77/111 (69%), Gaps = 9/111 (8%)
Query: 199 TPPNQPPSQPPNQPPNQQPNNTSASLPSPLYPWMRSQF---------ERKRGRQTYTRYQ 249
+P + + + PP+ Q ++A +YPWMR E KR R YTRYQ
Sbjct: 152 SPGTEDDTPASSDPPSSQNGQSTAQQQPQIYPWMRKLHISHDSMGGPEGKRARTAYTRYQ 211
Query: 250 TLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSK 300
TLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKK+NK K
Sbjct: 212 TLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKDNKLK 262
>gi|345323597|ref|XP_001510583.2| PREDICTED: homeobox protein Hox-A6-like [Ornithorhynchus anatinus]
Length = 232
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/109 (63%), Positives = 74/109 (67%), Gaps = 9/109 (8%)
Query: 199 TPPNQPPSQPPNQPPNQQPNNTSASLPSPLYPWMRSQFER---------KRGRQTYTRYQ 249
+P Q S Q T SP+YPWM+ +RGRQTYTRYQ
Sbjct: 106 SPEQQYKSDSSVQSKILNDEGTDRKYTSPVYPWMQRMNSCAGTVYGTHGRRGRQTYTRYQ 165
Query: 250 TLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
TLELEKEFHFNRYLTRRRRIEIA+ALCLTERQIKIWFQNRRMKWKKENK
Sbjct: 166 TLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKENK 214
>gi|4322076|gb|AAD15947.1| homeobox protein [Danio rerio]
Length = 244
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 63/89 (70%), Positives = 71/89 (79%), Gaps = 8/89 (8%)
Query: 226 SPLYPWMRSQ--------FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 277
+P+YPWM+ +RGRQTYTR+QTLELEKEFHFNRYLTRRRRIEI+HALCL
Sbjct: 127 TPVYPWMQRMNSCNGMPGSTGRRGRQTYTRFQTLELEKEFHFNRYLTRRRRIEISHALCL 186
Query: 278 TERQIKIWFQNRRMKWKKENKSKDGGSDA 306
TERQIKIWFQNRRMKWKKENK+ + A
Sbjct: 187 TERQIKIWFQNRRMKWKKENKAVNSAKSA 215
>gi|26984636|emb|CAD59113.1| SI:dZ254O17.3 (homeo box protein B6a) [Danio rerio]
gi|190339534|gb|AAI62839.1| Homeo box B6a [Danio rerio]
gi|190339552|gb|AAI62846.1| Homeo box B6a [Danio rerio]
Length = 228
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/90 (73%), Positives = 72/90 (80%), Gaps = 8/90 (8%)
Query: 226 SPLYPWMR------SQF--ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 277
+P+YPWM+ F +RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL
Sbjct: 130 APVYPWMQRMNSCNGTFGNAGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 189
Query: 278 TERQIKIWFQNRRMKWKKENKSKDGGSDAG 307
TERQIKIWFQNRRMKWKKENK + +G
Sbjct: 190 TERQIKIWFQNRRMKWKKENKLINCSQTSG 219
>gi|18858839|ref|NP_571194.1| homeobox protein Hox-B6a [Danio rerio]
gi|123250|sp|P15861.1|HXB6A_DANRE RecName: Full=Homeobox protein Hox-B6a; Short=Hox-B6; AltName:
Full=Homeobox protein Zf-22
gi|62536|emb|CAA48319.1| homeodomain protein [Danio rerio]
gi|313688|emb|CAA35171.1| Hox 2.2 [Danio rerio]
Length = 228
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/90 (73%), Positives = 72/90 (80%), Gaps = 8/90 (8%)
Query: 226 SPLYPWMR------SQF--ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 277
+P+YPWM+ F +RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL
Sbjct: 130 APVYPWMQRMNSCNGTFGNAGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 189
Query: 278 TERQIKIWFQNRRMKWKKENKSKDGGSDAG 307
TERQIKIWFQNRRMKWKKENK + +G
Sbjct: 190 TERQIKIWFQNRRMKWKKENKLINCSQTSG 219
>gi|213512182|ref|NP_001133047.1| homeobox protein HoxB6aa [Salmo salar]
gi|157816087|gb|ABV82062.1| homeobox protein HoxB6aa [Salmo salar]
Length = 227
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 72/130 (55%), Positives = 88/130 (67%), Gaps = 17/130 (13%)
Query: 188 QHHQVVV--NHQQTPPNQPPSQPPNQPPNQQPNNTSASLPSPLYPWMR------SQFER- 238
+ H +V+ +H++T + +Q+P+ +P+YPWM+ F
Sbjct: 96 EEHSLVLSQDHRKTDCSGQNKSIFGDSEDQKPS-------TPVYPWMQRMNSCNGTFGNP 148
Query: 239 -KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 297
+RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN
Sbjct: 149 GRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 208
Query: 298 KSKDGGSDAG 307
K + +G
Sbjct: 209 KLINSSQTSG 218
>gi|386782|gb|AAA36005.1| homeobox protein, partial [Homo sapiens]
Length = 99
Score = 138 bits (348), Expect = 3e-30, Method: Composition-based stats.
Identities = 66/78 (84%), Positives = 71/78 (91%), Gaps = 1/78 (1%)
Query: 228 LYPWMRSQ-FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWMRS +RKRGRQTYTRYQTLELEKEFH+NRYLTRRRRIEIAH LCLTERQIKIWF
Sbjct: 8 IYPWMRSSGTDRKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHTLCLTERQIKIWF 67
Query: 287 QNRRMKWKKENKSKDGGS 304
QNRRMKWKKENK+ G+
Sbjct: 68 QNRRMKWKKENKTAGPGT 85
>gi|255742435|gb|ACU32550.1| homeobox protein HoxA5 [Callorhinchus milii]
Length = 281
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 68/111 (61%), Positives = 77/111 (69%), Gaps = 9/111 (8%)
Query: 199 TPPNQPPSQPPNQPPNQQPNNTSASLPSPLYPWMRSQF---------ERKRGRQTYTRYQ 249
+P + + + PP+ Q ++A +YPWMR E KR R YTRYQ
Sbjct: 158 SPGTEDDTPASSDPPSSQNGQSTAQQQPQIYPWMRKLHISHDNMGGPEGKRARTAYTRYQ 217
Query: 250 TLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSK 300
TLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKK+NK K
Sbjct: 218 TLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKDNKLK 268
>gi|88604714|gb|ABD46728.1| homeobox protein sex comb reduced [Endeis spinosa]
Length = 265
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 68/106 (64%), Positives = 76/106 (71%), Gaps = 10/106 (9%)
Query: 212 PPNQQPNNTSASLPSPLYPWMR----------SQFERKRGRQTYTRYQTLELEKEFHFNR 261
PPN Q + + + +YPWMR + E KR R +YTRYQTLELEKEFHFNR
Sbjct: 144 PPNSQDSKSISQNTPQIYPWMRKVHIGQNGISNGMETKRQRTSYTRYQTLELEKEFHFNR 203
Query: 262 YLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSKDGGSDAG 307
YLTRRRRIEIAHALCL+ERQIKIWFQNRRMKWKKE+K G AG
Sbjct: 204 YLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKEHKQLPGSMAAG 249
>gi|432871986|ref|XP_004072060.1| PREDICTED: homeobox protein Hox-B5a-like, partial [Oryzias latipes]
Length = 294
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/236 (37%), Positives = 110/236 (46%), Gaps = 24/236 (10%)
Query: 82 NAAYYGAHEGGMEQYPRPDSPSMGHMGPQNGHQTPVVYASCKLQAAVGNGIIPGPESPND 141
N G H GG DS G + + G + P +SC L +A + + PG + +
Sbjct: 52 NTVNTGGHFGGG---TLTDSRGFGSVSAERGFRQP---SSCSLASAADSLLSPGTD-KSK 104
Query: 142 LVDPTLNNHHHHQHHHMNHHPHPHPQQQQPQQPPPQHMMYAQQPPPQHHQVVVNHQQTPP 201
L + H P+ Q + ++
Sbjct: 105 LAAQGSSPHAEQTGSGSLCSPNLSSSSGSSVGAAAQRFAELDDALTETEELQHTDAGRGN 164
Query: 202 NQPPSQPPNQPPNQQ---PNNTSASLPSP------LYPWMRSQF--------ERKRGRQT 244
N PP+ +QP Q P T+ ++PWMR + KR R
Sbjct: 165 NPPPTSGHSQPAKTQEGEPAGTAGGGTDSDPHTPQIFPWMRKLHISHDMTGPDGKRARTA 224
Query: 245 YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSK 300
YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKK+NK K
Sbjct: 225 YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKDNKVK 280
>gi|300797581|ref|NP_001178016.1| homeobox protein Hox-A6 [Rattus norvegicus]
gi|392347326|ref|XP_003749802.1| PREDICTED: homeobox protein Hox-A6-like [Rattus norvegicus]
gi|392356113|ref|XP_003752227.1| PREDICTED: homeobox protein Hox-A6-like [Rattus norvegicus]
gi|149033362|gb|EDL88163.1| rCG52456 [Rattus norvegicus]
Length = 233
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 67/99 (67%), Positives = 73/99 (73%), Gaps = 9/99 (9%)
Query: 220 TSASLPSPLYPWMRSQFER---------KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIE 270
T SP+YPWM+ +RGRQTYTRYQTLELEKEFHFNRYLTRRRRIE
Sbjct: 128 TDRKYTSPVYPWMQRMNSCAGAVYGSHGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIE 187
Query: 271 IAHALCLTERQIKIWFQNRRMKWKKENKSKDGGSDAGSD 309
IA+ALCLTERQIKIWFQNRRMKWKKENK + +G D
Sbjct: 188 IANALCLTERQIKIWFQNRRMKWKKENKLINSTQASGED 226
>gi|225707008|gb|ACO09350.1| Homeobox protein Hox-B6a [Osmerus mordax]
Length = 226
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 71/121 (58%), Positives = 84/121 (69%), Gaps = 17/121 (14%)
Query: 188 QHHQVVV--NHQQTPPNQPPSQPPNQPPNQQPNNTSASLPSPLYPWMR------SQFER- 238
+ H +V+ +H++T +Q+P+ +P+YPWM+ F
Sbjct: 96 EEHSLVLSQDHRKTDCTGQNKSLFGDSDDQKPS-------TPVYPWMQRMNACNGTFGNP 148
Query: 239 -KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 297
+RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN
Sbjct: 149 GRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 208
Query: 298 K 298
K
Sbjct: 209 K 209
>gi|410934527|gb|AFV93980.1| homeodomain-containing protein Hox5, partial [Branchiostoma
lanceolatum]
Length = 272
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 64/83 (77%), Positives = 66/83 (79%), Gaps = 8/83 (9%)
Query: 227 PLYPWMR--------SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
P+YPWMR + KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT
Sbjct: 183 PMYPWMRKIRLNHSAGTGDNKRTRTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 242
Query: 279 ERQIKIWFQNRRMKWKKENKSKD 301
ERQIKIWFQNRRMKWKKENK K
Sbjct: 243 ERQIKIWFQNRRMKWKKENKLKS 265
>gi|301128886|emb|CBL59349.1| HoxB6 [Scyliorhinus canicula]
Length = 230
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 67/93 (72%), Positives = 72/93 (77%), Gaps = 9/93 (9%)
Query: 227 PLYPWMR-------SQFE--RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 277
P+YPWM+ S F +RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL
Sbjct: 132 PVYPWMQRMNSSGASAFNPNGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 191
Query: 278 TERQIKIWFQNRRMKWKKENKSKDGGSDAGSDI 310
TERQIKIWFQNRRMKWKKENK +G +
Sbjct: 192 TERQIKIWFQNRRMKWKKENKLLSSSQLSGEET 224
>gi|359754087|gb|AEV59510.1| HOXA6 [Macropus eugenii]
Length = 234
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 68/109 (62%), Positives = 75/109 (68%), Gaps = 9/109 (8%)
Query: 199 TPPNQPPSQPPNQPPNQQPNNTSASLPSPLYPWMRSQFER---------KRGRQTYTRYQ 249
+P Q S+ Q + SP+YPWM+ +RGRQTYTRYQ
Sbjct: 106 SPEQQYKSESSVQGKILNDEGSDRKYTSPVYPWMQRMNSCAGTVYGTHGRRGRQTYTRYQ 165
Query: 250 TLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
TLELEKEFHFNRYLTRRRRIEIA+ALCLTERQIKIWFQNRRMKWKKENK
Sbjct: 166 TLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKENK 214
>gi|354479669|ref|XP_003502032.1| PREDICTED: homeobox protein Hox-A7-like [Cricetulus griseus]
Length = 233
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 64/76 (84%), Positives = 69/76 (90%), Gaps = 6/76 (7%)
Query: 228 LYPWMRSQF-----ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQI 282
L+ +M S+F +RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQI
Sbjct: 118 LFVYM-SKFLLSGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQI 176
Query: 283 KIWFQNRRMKWKKENK 298
KIWFQNRRMKWKKE+K
Sbjct: 177 KIWFQNRRMKWKKEHK 192
>gi|74267555|dbj|BAE44276.1| hoxB6b [Oryzias latipes]
gi|83016956|dbj|BAE53481.1| hoxB6b [Oryzias latipes]
Length = 231
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 63/76 (82%), Positives = 68/76 (89%), Gaps = 5/76 (6%)
Query: 228 LYPWMR-----SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQI 282
+YPWM+ S + +RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEI+HALCLTERQI
Sbjct: 138 IYPWMQRMNACSAGDGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEISHALCLTERQI 197
Query: 283 KIWFQNRRMKWKKENK 298
KIWFQNRRMKWKKENK
Sbjct: 198 KIWFQNRRMKWKKENK 213
>gi|332692488|gb|AEE90168.1| Homeobox B6a [Anguilla anguilla]
gi|385654479|gb|AFI61980.1| Hox-B6a [Anguilla japonica]
Length = 227
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 66/92 (71%), Positives = 73/92 (79%), Gaps = 8/92 (8%)
Query: 226 SPLYPWMR------SQFER--KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 277
+P+YPWM+ F +RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL
Sbjct: 129 TPVYPWMQRVNSCNGTFGNPGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 188
Query: 278 TERQIKIWFQNRRMKWKKENKSKDGGSDAGSD 309
TERQIKIWFQNRRMKWKKENK + +G +
Sbjct: 189 TERQIKIWFQNRRMKWKKENKLINSSQISGEE 220
>gi|334322795|ref|XP_003340303.1| PREDICTED: homeobox protein Hox-B6-like [Monodelphis domestica]
Length = 223
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/84 (77%), Positives = 70/84 (83%), Gaps = 9/84 (10%)
Query: 224 LPSPLYPWMR-------SQF--ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHA 274
+P+YPWM+ S F +RGRQTYTRYQTLELEKEFH+NRYLTRRRRIEIAHA
Sbjct: 122 CSTPVYPWMQRMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHA 181
Query: 275 LCLTERQIKIWFQNRRMKWKKENK 298
LCLTERQIKIWFQNRRMKWKKENK
Sbjct: 182 LCLTERQIKIWFQNRRMKWKKENK 205
>gi|400180337|gb|AFP73304.1| Hoxa7beta [Polyodon spathula]
Length = 210
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 62/70 (88%), Positives = 67/70 (95%), Gaps = 1/70 (1%)
Query: 228 LYPWMR-SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWMR S +RKRGRQTYTRYQTLELEKEFHF+RYLTRRRR+E+AHALCLTERQIKIWF
Sbjct: 117 MYPWMRTSGGDRKRGRQTYTRYQTLELEKEFHFSRYLTRRRRVEVAHALCLTERQIKIWF 176
Query: 287 QNRRMKWKKE 296
QNRRMKWKKE
Sbjct: 177 QNRRMKWKKE 186
>gi|27544943|ref|NP_034584.1| homeobox protein Hox-A6 [Mus musculus]
gi|20141492|sp|P09092.2|HXA6_MOUSE RecName: Full=Homeobox protein Hox-A6; AltName: Full=Homeobox
protein Hox-1.2; AltName: Full=Homeobox protein M5-4
gi|9716486|gb|AAF97512.1|AF247663_1 homeodomain protein Hoxa 6 [Mus musculus]
gi|111599973|gb|AAI19106.1| Homeo box A6 [Mus musculus]
gi|111601101|gb|AAI19108.1| Homeo box A6 [Mus musculus]
gi|148666243|gb|EDK98659.1| homeobox A6 [Mus musculus]
Length = 232
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 67/99 (67%), Positives = 73/99 (73%), Gaps = 9/99 (9%)
Query: 220 TSASLPSPLYPWMRSQFER---------KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIE 270
T SP+YPWM+ +RGRQTYTRYQTLELEKEFHFNRYLTRRRRIE
Sbjct: 127 TDRKYTSPVYPWMQRMNSCAGAVYGSHGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIE 186
Query: 271 IAHALCLTERQIKIWFQNRRMKWKKENKSKDGGSDAGSD 309
IA+ALCLTERQIKIWFQNRRMKWKKENK + +G D
Sbjct: 187 IANALCLTERQIKIWFQNRRMKWKKENKLINSTQASGED 225
>gi|301617259|ref|XP_002938066.1| PREDICTED: homeobox protein Hox-B6 [Xenopus (Silurana) tropicalis]
Length = 223
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/86 (75%), Positives = 71/86 (82%), Gaps = 9/86 (10%)
Query: 222 ASLPSPLYPWMR-------SQF--ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIA 272
A +P+YPWM+ S F +RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIA
Sbjct: 120 AKCATPVYPWMQRMNSCNSSVFGPSGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIA 179
Query: 273 HALCLTERQIKIWFQNRRMKWKKENK 298
H+LCLTERQIKIWFQNRRMKWKKE+K
Sbjct: 180 HSLCLTERQIKIWFQNRRMKWKKESK 205
>gi|158702310|gb|ABW77506.1| homeobox protein HoxB6bb [Salmo salar]
Length = 232
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 71/119 (59%), Positives = 79/119 (66%), Gaps = 12/119 (10%)
Query: 192 VVVNHQQTPPNQPPSQPPNQPPNQQPNNTSA---SLPSPLYPWMRSQ---------FERK 239
N ++ P Q ++ Q N T+A S LYPWM+ +
Sbjct: 91 AFANREEQPLVVTQDQRRSECLEQNVNITTAVDDKSSSLLYPWMQRMNSCTAGTFGSSGR 150
Query: 240 RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEI+HALCLTERQIKIWFQNRRMKWKKENK
Sbjct: 151 RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEISHALCLTERQIKIWFQNRRMKWKKENK 209
>gi|410901645|ref|XP_003964306.1| PREDICTED: homeobox protein Hox-B6a-like [Takifugu rubripes]
gi|119370787|sp|Q1KKY0.1|HXB6A_FUGRU RecName: Full=Homeobox protein Hox-B6a
gi|94482796|gb|ABF22414.1| homeobox protein HoxB6a [Takifugu rubripes]
Length = 274
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/80 (81%), Positives = 68/80 (85%), Gaps = 8/80 (10%)
Query: 227 PLYPWMR------SQFER--KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
P+YPWM+ F +RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT
Sbjct: 170 PIYPWMQRMNACNGTFGSPGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 229
Query: 279 ERQIKIWFQNRRMKWKKENK 298
ERQIKIWFQNRRMKWKKENK
Sbjct: 230 ERQIKIWFQNRRMKWKKENK 249
>gi|363743428|ref|XP_001236990.2| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-B6-like
[Gallus gallus]
Length = 222
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/84 (77%), Positives = 70/84 (83%), Gaps = 9/84 (10%)
Query: 224 LPSPLYPWMR-------SQF--ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHA 274
+P+YPWM+ S F +RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAH+
Sbjct: 121 CSAPVYPWMQRMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHS 180
Query: 275 LCLTERQIKIWFQNRRMKWKKENK 298
LCLTERQIKIWFQNRRMKWKKENK
Sbjct: 181 LCLTERQIKIWFQNRRMKWKKENK 204
>gi|301128875|emb|CBL59339.1| HoxA5 [Scyliorhinus canicula]
Length = 274
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 68/111 (61%), Positives = 77/111 (69%), Gaps = 9/111 (8%)
Query: 199 TPPNQPPSQPPNQPPNQQPNNTSASLPSPLYPWMRSQF---------ERKRGRQTYTRYQ 249
+P + + + PP+ Q ++A +YPWMR E KR R YTRYQ
Sbjct: 151 SPGTEDDTPASSDPPSSQNGQSTAQQQPQIYPWMRKLHISHDSMGGPEGKRARTAYTRYQ 210
Query: 250 TLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSK 300
TLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKK+NK K
Sbjct: 211 TLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKDNKLK 261
>gi|213512343|ref|NP_001135147.1| homeobox protein HoxB6ba [Salmo salar]
gi|157816119|gb|ABV82078.1| homeobox protein HoxB6ba [Salmo salar]
Length = 223
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 70/118 (59%), Positives = 78/118 (66%), Gaps = 11/118 (9%)
Query: 192 VVVNHQQTPPNQPPSQPPNQPPNQQPNNTSA--SLPSPLYPWMRSQFER---------KR 240
N ++ P Q ++ Q N T+A S LYPWM+ +R
Sbjct: 89 AFANREEQPLFVTQDQRKSECLEQNVNITTAVDDKSSLLYPWMQRMSSCTAGTLGSSGRR 148
Query: 241 GRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
GRQTYTRYQTLELEKEFHFNRYLTRRRRIEI+HALCLTERQIK WFQNRRMKWKKENK
Sbjct: 149 GRQTYTRYQTLELEKEFHFNRYLTRRRRIEISHALCLTERQIKTWFQNRRMKWKKENK 206
>gi|359754099|gb|AEV59521.1| HOXB6 [Macropus eugenii]
Length = 223
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 65/84 (77%), Positives = 70/84 (83%), Gaps = 9/84 (10%)
Query: 224 LPSPLYPWMR-------SQF--ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHA 274
+P+YPWM+ S F +RGRQTYTRYQTLELEKEFH+NRYLTRRRRIEIAHA
Sbjct: 122 CSTPVYPWMQRMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHA 181
Query: 275 LCLTERQIKIWFQNRRMKWKKENK 298
LCLTERQIKIWFQNRRMKWKKENK
Sbjct: 182 LCLTERQIKIWFQNRRMKWKKENK 205
>gi|229577337|ref|NP_571613.1| homeobox protein Hox-B6b [Danio rerio]
gi|190337106|gb|AAI62868.1| Homeo box B6b [Danio rerio]
gi|190338163|gb|AAI62890.1| Homeo box B6b [Danio rerio]
Length = 224
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 62/82 (75%), Positives = 69/82 (84%), Gaps = 8/82 (9%)
Query: 226 SPLYPWMRSQ--------FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 277
+P+YPWM+ +RGRQTYTR+QTLELEKEFHFNRYLTRRRRIEI+HALCL
Sbjct: 127 TPVYPWMQRMNSCNGMPGSTGRRGRQTYTRFQTLELEKEFHFNRYLTRRRRIEISHALCL 186
Query: 278 TERQIKIWFQNRRMKWKKENKS 299
TERQIKIWFQNRRMKWKKENK+
Sbjct: 187 TERQIKIWFQNRRMKWKKENKA 208
>gi|410952526|ref|XP_003982930.1| PREDICTED: homeobox protein Hox-A6 isoform 2 [Felis catus]
Length = 249
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 68/107 (63%), Positives = 75/107 (70%), Gaps = 9/107 (8%)
Query: 220 TSASLPSPLYPWMRSQFER---------KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIE 270
T SP+YPWM+ +RGRQTYTRYQTLELEKEFHFNRYLTRRRRIE
Sbjct: 128 TDRKYTSPVYPWMQRMNSCAGAVYGSHGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIE 187
Query: 271 IAHALCLTERQIKIWFQNRRMKWKKENKSKDGGSDAGSDITPATSPQ 317
IA+ALCLTERQIKIWFQNRRMKWKKENK + +G D P+
Sbjct: 188 IANALCLTERQIKIWFQNRRMKWKKENKLINSTQPSGEDAEAKAGPR 234
>gi|60392424|sp|Q9YGT4.2|HXB6B_DANRE RecName: Full=Homeobox protein Hox-B6b; AltName: Full=Homeobox
protein Hox-A7
gi|22316135|emb|CAD44457.1| homeo box protein B6b [Danio rerio]
Length = 224
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 62/82 (75%), Positives = 69/82 (84%), Gaps = 8/82 (9%)
Query: 226 SPLYPWMRSQ--------FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 277
+P+YPWM+ +RGRQTYTR+QTLELEKEFHFNRYLTRRRRIEI+HALCL
Sbjct: 127 TPVYPWMQRMNSCNGMPGSTGRRGRQTYTRFQTLELEKEFHFNRYLTRRRRIEISHALCL 186
Query: 278 TERQIKIWFQNRRMKWKKENKS 299
TERQIKIWFQNRRMKWKKENK+
Sbjct: 187 TERQIKIWFQNRRMKWKKENKA 208
>gi|62125375|gb|AAX63757.1| HoxB5bi [Oncorhynchus mykiss]
Length = 256
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 69/121 (57%), Positives = 79/121 (65%), Gaps = 12/121 (9%)
Query: 192 VVVNHQQTPPNQPPSQPPNQPPNQQPNNTSASLPSP----LYPWMRSQF--------ERK 239
VV+ + + + P Q P Q+ N TS + ++PWMR + K
Sbjct: 136 AVVSESEEGAHTSSTAPRAQQPQQESNATSTTANDCQTPQIFPWMRKLHINHEMAGPDGK 195
Query: 240 RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKS 299
R R YTRYQTLELEKEFHFNRYLTRRRRIEIAH LCLTERQIKIWFQNRRMKWKK+NK
Sbjct: 196 RARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHTLCLTERQIKIWFQNRRMKWKKDNKL 255
Query: 300 K 300
K
Sbjct: 256 K 256
>gi|395540396|ref|XP_003772141.1| PREDICTED: homeobox protein Hox-A6 [Sarcophilus harrisii]
Length = 234
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 68/109 (62%), Positives = 75/109 (68%), Gaps = 9/109 (8%)
Query: 199 TPPNQPPSQPPNQPPNQQPNNTSASLPSPLYPWMRSQFER---------KRGRQTYTRYQ 249
+P Q S+ Q + SP+YPWM+ +RGRQTYTRYQ
Sbjct: 106 SPEQQYKSESSVQGKILNDEGSDRKYTSPVYPWMQRMNSCAGTVYGTHGRRGRQTYTRYQ 165
Query: 250 TLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
TLELEKEFHFNRYLTRRRRIEIA+ALCLTERQIKIWFQNRRMKWKKENK
Sbjct: 166 TLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKENK 214
>gi|325260874|gb|ADZ04664.1| homeobox C6 [Notophthalmus viridescens]
Length = 234
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 64/94 (68%), Positives = 73/94 (77%), Gaps = 12/94 (12%)
Query: 228 LYPWMRSQ---------FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWM+ +R+RGRQ Y+RYQTLELEKEFHFNRYLTRRRRIEIA+ALCLT
Sbjct: 122 IYPWMQRMNSHSGVGYGTDRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLT 181
Query: 279 ERQIKIWFQNRRMKWKKEN---KSKDGGSDAGSD 309
ERQIKIWFQNRRMKWKKE+ + GG+ A SD
Sbjct: 182 ERQIKIWFQNRRMKWKKESNLTSTLSGGTGAASD 215
>gi|395532700|ref|XP_003768406.1| PREDICTED: homeobox protein Hox-B6 [Sarcophilus harrisii]
Length = 223
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 65/84 (77%), Positives = 70/84 (83%), Gaps = 9/84 (10%)
Query: 224 LPSPLYPWMR-------SQF--ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHA 274
+P+YPWM+ S F +RGRQTYTRYQTLELEKEFH+NRYLTRRRRIEIAHA
Sbjct: 122 CSTPVYPWMQRMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHA 181
Query: 275 LCLTERQIKIWFQNRRMKWKKENK 298
LCLTERQIKIWFQNRRMKWKKENK
Sbjct: 182 LCLTERQIKIWFQNRRMKWKKENK 205
>gi|334349109|ref|XP_001365645.2| PREDICTED: homeobox protein Hox-A6-like [Monodelphis domestica]
Length = 232
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 68/109 (62%), Positives = 75/109 (68%), Gaps = 9/109 (8%)
Query: 199 TPPNQPPSQPPNQPPNQQPNNTSASLPSPLYPWMRSQFER---------KRGRQTYTRYQ 249
+P Q S+ Q + SP+YPWM+ +RGRQTYTRYQ
Sbjct: 106 SPEQQYKSESSVQGKILNDEGSDRKYTSPVYPWMQRMNSCAGTVYGTHGRRGRQTYTRYQ 165
Query: 250 TLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
TLELEKEFHFNRYLTRRRRIEIA+ALCLTERQIKIWFQNRRMKWKKENK
Sbjct: 166 TLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKENK 214
>gi|224045304|ref|XP_002194920.1| PREDICTED: homeobox protein Hox-A6 [Taeniopygia guttata]
Length = 231
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 68/107 (63%), Positives = 73/107 (68%), Gaps = 9/107 (8%)
Query: 201 PNQPPSQPPNQPPNQQPNNTSASLPSPLYPWMRSQFER---------KRGRQTYTRYQTL 251
P+Q Q T SP+YPWM+ +RGRQTYTRYQTL
Sbjct: 107 PDQQYKTSGGQAKIINDEGTDRKYTSPVYPWMQRMNSCAGTVYGTHGRRGRQTYTRYQTL 166
Query: 252 ELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
ELEKEFHFNRYLTRRRRIEIA+ALCLTERQIKIWFQNRRMKWKKENK
Sbjct: 167 ELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKENK 213
>gi|348522889|ref|XP_003448956.1| PREDICTED: homeobox protein Hox-A7-like [Oreochromis niloticus]
Length = 224
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 66/99 (66%), Positives = 77/99 (77%), Gaps = 1/99 (1%)
Query: 213 PNQQPNNTSASLPSPLYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEI 271
P +P +S +YPWMR+ RKRGRQTY+R+QTLELEKEFHFNRYLTRRRRIEI
Sbjct: 100 PGTEPLTSSPDKQHRMYPWMRASDPNRKRGRQTYSRHQTLELEKEFHFNRYLTRRRRIEI 159
Query: 272 AHALCLTERQIKIWFQNRRMKWKKENKSKDGGSDAGSDI 310
AHALCL+ERQIKIWFQNRRMKWKK++K + + DI
Sbjct: 160 AHALCLSERQIKIWFQNRRMKWKKDHKDEPSNEEQHCDI 198
>gi|254212177|gb|ACT65752.1| Hoxa5 [Leucoraja erinacea]
Length = 275
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 68/111 (61%), Positives = 76/111 (68%), Gaps = 9/111 (8%)
Query: 199 TPPNQPPSQPPNQPPNQQPNNTSASLPSPLYPWMRSQF---------ERKRGRQTYTRYQ 249
+P + + + PP+ Q +A +YPWMR E KR R YTRYQ
Sbjct: 152 SPGTEDDTPASSDPPSSQNGQGTAQQQPQIYPWMRKLHISHDSMGGPEGKRARTAYTRYQ 211
Query: 250 TLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSK 300
TLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKK+NK K
Sbjct: 212 TLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKDNKLK 262
>gi|47229432|emb|CAF99420.1| unnamed protein product [Tetraodon nigroviridis]
Length = 236
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 69/113 (61%), Positives = 75/113 (66%), Gaps = 17/113 (15%)
Query: 197 QQTPPNQPPSQPPNQPPNQQPNNTSASLPSPLYPWMR--------SQFERKRGRQTYTRY 248
+ P P+ P N + QP +YPWMR S E KR R YTRY
Sbjct: 120 EDKPAGGAPTTPQNVNDSAQPQ---------IYPWMRKIHISHELSGPEGKRARTAYTRY 170
Query: 249 QTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSKD 301
QTLELEKEFHFNRYLTRRRRIEIAHALCL+ERQIKIWFQNRRMKWKK+NK K
Sbjct: 171 QTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNKLKS 223
>gi|426355742|ref|XP_004045267.1| PREDICTED: homeobox protein Hox-A6 [Gorilla gorilla gorilla]
Length = 233
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 64/82 (78%), Positives = 68/82 (82%), Gaps = 9/82 (10%)
Query: 226 SPLYPWMRSQFER---------KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALC 276
SP+YPWM+ +RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIA+ALC
Sbjct: 134 SPVYPWMQRMNSCAGAVYGSHGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIANALC 193
Query: 277 LTERQIKIWFQNRRMKWKKENK 298
LTERQIKIWFQNRRMKWKKENK
Sbjct: 194 LTERQIKIWFQNRRMKWKKENK 215
>gi|351713533|gb|EHB16452.1| Homeobox protein Hox-B7 [Heterocephalus glaber]
Length = 210
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 64/73 (87%), Positives = 67/73 (91%), Gaps = 1/73 (1%)
Query: 237 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
+RKRGRQTYTRYQTLELEKEFH+NRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE
Sbjct: 129 DRKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 188
Query: 297 NKSKDGGSDAGSD 309
NK+ G AG D
Sbjct: 189 NKT-SGPGVAGQD 200
>gi|217035832|gb|ACJ74387.1| Hox8 [Branchiostoma lanceolatum]
Length = 213
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 74/127 (58%), Positives = 83/127 (65%), Gaps = 18/127 (14%)
Query: 197 QQTPPNQPPSQPPNQPPNQQPNNTSASLPSPLYPWMRSQF-ERKRGRQTYTRYQTLELEK 255
QQ P Q +P QQ + L P YPWMR+ ER+RGRQTY+RYQTLELEK
Sbjct: 92 QQRPSCQQEEKPATMGMAQQ-----SQLAIPFYPWMRTAGPERRRGRQTYSRYQTLELEK 146
Query: 256 EFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE------------NKSKDGG 303
EFHFN+YLTRRRRIEIAHAL LTERQIKIWFQNRRMK KKE KS DG
Sbjct: 147 EFHFNKYLTRRRRIEIAHALGLTERQIKIWFQNRRMKLKKEAAMLCPPKVEETEKSSDGQ 206
Query: 304 SDAGSDI 310
S+ ++
Sbjct: 207 SEKSEEV 213
>gi|432871367|ref|XP_004071930.1| PREDICTED: homeobox protein Hox-B6a-like [Oryzias latipes]
gi|74267541|dbj|BAE44269.1| hoxB6a [Oryzias latipes]
gi|83016949|dbj|BAE53476.1| hoxB6a [Oryzias latipes]
Length = 274
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 65/84 (77%), Positives = 70/84 (83%), Gaps = 8/84 (9%)
Query: 223 SLPSPLYPWMR------SQFER--KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHA 274
+ +P+YPWM+ F +RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHA
Sbjct: 166 AASTPIYPWMQRMNACNGTFGSPGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHA 225
Query: 275 LCLTERQIKIWFQNRRMKWKKENK 298
LCLTERQIKIWFQNRRMKWKKENK
Sbjct: 226 LCLTERQIKIWFQNRRMKWKKENK 249
>gi|403287993|ref|XP_003935202.1| PREDICTED: homeobox protein Hox-A6 [Saimiri boliviensis
boliviensis]
gi|170649679|gb|ACB21264.1| homeobox A6 (predicted) [Callicebus moloch]
Length = 233
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 69/114 (60%), Positives = 75/114 (65%), Gaps = 9/114 (7%)
Query: 205 PSQPPNQPPNQQPNNTSASLPSPLYPWMRSQFER---------KRGRQTYTRYQTLELEK 255
P Q T SP+YPWM+ +RGRQTYTRYQTLELEK
Sbjct: 113 PDSSSGQGKALHDEGTDRKYTSPVYPWMQRMNSCAGAVYGSHGRRGRQTYTRYQTLELEK 172
Query: 256 EFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSKDGGSDAGSD 309
EFHFNRYLTRRRRIEIA+ALCLTERQIKIWFQNRRMKWKKENK + +G D
Sbjct: 173 EFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKENKLINSTQPSGED 226
>gi|344270546|ref|XP_003407105.1| PREDICTED: homeobox protein Hox-A6-like [Loxodonta africana]
Length = 233
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 67/99 (67%), Positives = 73/99 (73%), Gaps = 9/99 (9%)
Query: 220 TSASLPSPLYPWMRSQFER---------KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIE 270
T SP+YPWM+ +RGRQTYTRYQTLELEKEFHFNRYLTRRRRIE
Sbjct: 128 TDRKYTSPVYPWMQRMNSCAGAVYGSHGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIE 187
Query: 271 IAHALCLTERQIKIWFQNRRMKWKKENKSKDGGSDAGSD 309
IA+ALCLTERQIKIWFQNRRMKWKKENK + +G D
Sbjct: 188 IANALCLTERQIKIWFQNRRMKWKKENKLINSTQPSGED 226
>gi|109067080|ref|XP_001092459.1| PREDICTED: homeobox protein Hox-A6-like isoform 2 [Macaca mulatta]
gi|355560739|gb|EHH17425.1| Homeobox protein Hox-1B [Macaca mulatta]
gi|355747755|gb|EHH52252.1| Homeobox protein Hox-1B [Macaca fascicularis]
Length = 233
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 66/93 (70%), Positives = 72/93 (77%), Gaps = 9/93 (9%)
Query: 226 SPLYPWMRSQFER---------KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALC 276
SP+YPWM+ +RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIA+ALC
Sbjct: 134 SPVYPWMQRMNSCAGAVYGSHGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIANALC 193
Query: 277 LTERQIKIWFQNRRMKWKKENKSKDGGSDAGSD 309
LTERQIKIWFQNRRMKWKKENK + +G D
Sbjct: 194 LTERQIKIWFQNRRMKWKKENKLINSTQPSGED 226
>gi|71896757|ref|NP_001026158.1| homeobox protein Hox-A6 [Gallus gallus]
gi|363730223|ref|XP_003640784.1| PREDICTED: homeobox protein Hox-A6-like isoform 1 [Gallus gallus]
gi|60392397|sp|Q5YLH5.1|HXA6_CHICK RecName: Full=Homeobox protein Hox-A6
gi|34732777|gb|AAQ81318.1| HOXA6 [Gallus gallus]
Length = 231
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 65/88 (73%), Positives = 69/88 (78%), Gaps = 9/88 (10%)
Query: 220 TSASLPSPLYPWMRSQFER---------KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIE 270
T SP+YPWM+ +RGRQTYTRYQTLELEKEFHFNRYLTRRRRIE
Sbjct: 126 TDRKYTSPVYPWMQRMNSCAGTVYGAHGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIE 185
Query: 271 IAHALCLTERQIKIWFQNRRMKWKKENK 298
IA+ALCLTERQIKIWFQNRRMKWKKENK
Sbjct: 186 IANALCLTERQIKIWFQNRRMKWKKENK 213
>gi|309951537|gb|ADO95194.1| antennapedia-like protein [Rhodnius prolixus]
Length = 77
Score = 137 bits (345), Expect = 6e-30, Method: Composition-based stats.
Identities = 68/77 (88%), Positives = 73/77 (94%), Gaps = 1/77 (1%)
Query: 242 RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSK- 300
RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK+K
Sbjct: 1 RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTKG 60
Query: 301 DGGSDAGSDITPATSPQ 317
D G++ GSD++P TSPQ
Sbjct: 61 DIGANDGSDLSPQTSPQ 77
>gi|395830946|ref|XP_003788573.1| PREDICTED: homeobox protein Hox-A6 [Otolemur garnettii]
gi|202070728|gb|ACH95316.1| homeobox A6 (predicted) [Otolemur garnettii]
Length = 233
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 67/94 (71%), Positives = 74/94 (78%), Gaps = 13/94 (13%)
Query: 226 SPLYPWMRSQFER---------KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALC 276
SP+YPWM+ +RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIA+ALC
Sbjct: 134 SPVYPWMQRMNSCTGAVYGSHGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIANALC 193
Query: 277 LTERQIKIWFQNRRMKWKKENK----SKDGGSDA 306
LTERQIKIWFQNRRMKWKKENK ++ GG D+
Sbjct: 194 LTERQIKIWFQNRRMKWKKENKLINSTQPGGEDS 227
>gi|351704296|gb|EHB07215.1| Homeobox protein Hox-A6 [Heterocephalus glaber]
Length = 233
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 67/99 (67%), Positives = 73/99 (73%), Gaps = 9/99 (9%)
Query: 220 TSASLPSPLYPWMRSQFER---------KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIE 270
T SP+YPWM+ +RGRQTYTRYQTLELEKEFHFNRYLTRRRRIE
Sbjct: 128 TDRKYTSPVYPWMQRMNSCAGAVYGSHGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIE 187
Query: 271 IAHALCLTERQIKIWFQNRRMKWKKENKSKDGGSDAGSD 309
IA+ALCLTERQIKIWFQNRRMKWKKENK + +G D
Sbjct: 188 IANALCLTERQIKIWFQNRRMKWKKENKLINSTQPSGED 226
>gi|354479702|ref|XP_003502048.1| PREDICTED: homeobox protein Hox-A6-like [Cricetulus griseus]
gi|344252751|gb|EGW08855.1| Homeobox protein Hox-A6 [Cricetulus griseus]
Length = 233
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 67/99 (67%), Positives = 73/99 (73%), Gaps = 9/99 (9%)
Query: 220 TSASLPSPLYPWMRSQFER---------KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIE 270
T SP+YPWM+ +RGRQTYTRYQTLELEKEFHFNRYLTRRRRIE
Sbjct: 128 TDRKYTSPVYPWMQRMNSCAGAVYGSHGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIE 187
Query: 271 IAHALCLTERQIKIWFQNRRMKWKKENKSKDGGSDAGSD 309
IA+ALCLTERQIKIWFQNRRMKWKKENK + +G D
Sbjct: 188 IANALCLTERQIKIWFQNRRMKWKKENKLINSTQPSGED 226
>gi|297680782|ref|XP_002818147.1| PREDICTED: homeobox protein Hox-A6 [Pongo abelii]
Length = 233
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 66/93 (70%), Positives = 72/93 (77%), Gaps = 9/93 (9%)
Query: 226 SPLYPWMRSQFER---------KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALC 276
SP+YPWM+ +RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIA+ALC
Sbjct: 134 SPVYPWMQRMNSCAGTVYGSHGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIANALC 193
Query: 277 LTERQIKIWFQNRRMKWKKENKSKDGGSDAGSD 309
LTERQIKIWFQNRRMKWKKENK + +G D
Sbjct: 194 LTERQIKIWFQNRRMKWKKENKLINSTQPSGED 226
>gi|332242656|ref|XP_003270499.1| PREDICTED: homeobox protein Hox-A6 [Nomascus leucogenys]
Length = 233
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 64/82 (78%), Positives = 68/82 (82%), Gaps = 9/82 (10%)
Query: 226 SPLYPWMRSQFER---------KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALC 276
SP+YPWM+ +RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIA+ALC
Sbjct: 134 SPVYPWMQRMNSCAGAVYGSHGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIANALC 193
Query: 277 LTERQIKIWFQNRRMKWKKENK 298
LTERQIKIWFQNRRMKWKKENK
Sbjct: 194 LTERQIKIWFQNRRMKWKKENK 215
>gi|296209381|ref|XP_002751499.1| PREDICTED: homeobox protein Hox-A6 [Callithrix jacchus]
Length = 233
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 67/100 (67%), Positives = 73/100 (73%), Gaps = 9/100 (9%)
Query: 219 NTSASLPSPLYPWMRSQFER---------KRGRQTYTRYQTLELEKEFHFNRYLTRRRRI 269
T SP+YPWM+ +RGRQTYTRYQTLELEKEFHFNRYLTRRRRI
Sbjct: 127 GTDRKYTSPVYPWMQRMNSCAGAVYGSHGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRI 186
Query: 270 EIAHALCLTERQIKIWFQNRRMKWKKENKSKDGGSDAGSD 309
EIA+ALCLTERQIKIWFQNRRMKWKKENK + +G D
Sbjct: 187 EIANALCLTERQIKIWFQNRRMKWKKENKLINSTQPSGED 226
>gi|13489077|ref|NP_076919.1| homeobox protein Hox-A6 [Homo sapiens]
gi|332864943|ref|XP_003318413.1| PREDICTED: homeobox protein Hox-A6 [Pan troglodytes]
gi|397472865|ref|XP_003807954.1| PREDICTED: homeobox protein Hox-A6 [Pan paniscus]
gi|17378385|sp|P31267.2|HXA6_HUMAN RecName: Full=Homeobox protein Hox-A6; AltName: Full=Homeobox
protein Hox-1B
gi|47479571|gb|AAH69497.1| Homeobox A6 [Homo sapiens]
gi|51094978|gb|EAL24222.1| homeo box A6 [Homo sapiens]
gi|85397002|gb|AAI04916.1| Homeobox A6 [Homo sapiens]
gi|85397005|gb|AAI04918.1| Homeobox A6 [Homo sapiens]
gi|119614281|gb|EAW93875.1| homeobox A6, isoform CRA_b [Homo sapiens]
gi|306921739|dbj|BAJ17949.1| homeobox A6 [synthetic construct]
gi|312152714|gb|ADQ32869.1| homeobox A6 [synthetic construct]
Length = 233
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 66/93 (70%), Positives = 72/93 (77%), Gaps = 9/93 (9%)
Query: 226 SPLYPWMRSQFER---------KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALC 276
SP+YPWM+ +RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIA+ALC
Sbjct: 134 SPVYPWMQRMNSCAGAVYGSHGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIANALC 193
Query: 277 LTERQIKIWFQNRRMKWKKENKSKDGGSDAGSD 309
LTERQIKIWFQNRRMKWKKENK + +G D
Sbjct: 194 LTERQIKIWFQNRRMKWKKENKLINSTQPSGED 226
>gi|154183831|gb|ABS70771.1| Hoxa7a [Haplochromis burtoni]
Length = 224
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 65/87 (74%), Positives = 73/87 (83%), Gaps = 1/87 (1%)
Query: 213 PNQQPNNTSASLPSPLYPWMR-SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEI 271
P +P +S +YPWMR S RKRGRQTY+R+QTLELEKEFHFNRYLTRRRRIEI
Sbjct: 100 PGTEPLTSSPDKQHRMYPWMRVSDPNRKRGRQTYSRHQTLELEKEFHFNRYLTRRRRIEI 159
Query: 272 AHALCLTERQIKIWFQNRRMKWKKENK 298
AHALCL+ERQIKIWFQNRRMKWKK++K
Sbjct: 160 AHALCLSERQIKIWFQNRRMKWKKDHK 186
>gi|226822850|gb|ACO83085.1| homeobox A6 (predicted) [Dasypus novemcinctus]
Length = 233
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 67/99 (67%), Positives = 73/99 (73%), Gaps = 9/99 (9%)
Query: 220 TSASLPSPLYPWMRSQFER---------KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIE 270
T SP+YPWM+ +RGRQTYTRYQTLELEKEFHFNRYLTRRRRIE
Sbjct: 128 TDRKYTSPVYPWMQRMNSCAGAVYGSHGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIE 187
Query: 271 IAHALCLTERQIKIWFQNRRMKWKKENKSKDGGSDAGSD 309
IA+ALCLTERQIKIWFQNRRMKWKKENK + +G D
Sbjct: 188 IANALCLTERQIKIWFQNRRMKWKKENKLINSTQPSGED 226
>gi|149705651|ref|XP_001499526.1| PREDICTED: homeobox protein Hox-A6 [Equus caballus]
Length = 233
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 67/100 (67%), Positives = 73/100 (73%), Gaps = 9/100 (9%)
Query: 219 NTSASLPSPLYPWMRSQFER---------KRGRQTYTRYQTLELEKEFHFNRYLTRRRRI 269
T SP+YPWM+ +RGRQTYTRYQTLELEKEFHFNRYLTRRRRI
Sbjct: 127 GTDRKYTSPVYPWMQRMNSCAGAVYGSHGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRI 186
Query: 270 EIAHALCLTERQIKIWFQNRRMKWKKENKSKDGGSDAGSD 309
EIA+ALCLTERQIKIWFQNRRMKWKKENK + +G D
Sbjct: 187 EIANALCLTERQIKIWFQNRRMKWKKENKLINSTQPSGED 226
>gi|449268333|gb|EMC79202.1| Homeobox protein Hox-A6 [Columba livia]
Length = 231
Score = 137 bits (344), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 65/88 (73%), Positives = 69/88 (78%), Gaps = 9/88 (10%)
Query: 220 TSASLPSPLYPWMRSQFER---------KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIE 270
T SP+YPWM+ +RGRQTYTRYQTLELEKEFHFNRYLTRRRRIE
Sbjct: 126 TDRKYTSPVYPWMQRMNSCAGTVYGTHGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIE 185
Query: 271 IAHALCLTERQIKIWFQNRRMKWKKENK 298
IA+ALCLTERQIKIWFQNRRMKWKKENK
Sbjct: 186 IANALCLTERQIKIWFQNRRMKWKKENK 213
>gi|426227776|ref|XP_004007991.1| PREDICTED: homeobox protein Hox-A6 [Ovis aries]
Length = 233
Score = 137 bits (344), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 67/99 (67%), Positives = 73/99 (73%), Gaps = 9/99 (9%)
Query: 220 TSASLPSPLYPWMRSQFER---------KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIE 270
T SP+YPWM+ +RGRQTYTRYQTLELEKEFHFNRYLTRRRRIE
Sbjct: 128 TDRKYTSPVYPWMQRMNSCSGAVYGSHGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIE 187
Query: 271 IAHALCLTERQIKIWFQNRRMKWKKENKSKDGGSDAGSD 309
IA+ALCLTERQIKIWFQNRRMKWKKENK + +G D
Sbjct: 188 IANALCLTERQIKIWFQNRRMKWKKENKLINSTQPSGED 226
>gi|73976527|ref|XP_854141.1| PREDICTED: homeobox protein Hox-A6 [Canis lupus familiaris]
gi|358411873|ref|XP_003582149.1| PREDICTED: homeobox protein Hox-A6-like [Bos taurus]
gi|359064775|ref|XP_003586029.1| PREDICTED: homeobox protein Hox-A6-like [Bos taurus]
gi|410952524|ref|XP_003982929.1| PREDICTED: homeobox protein Hox-A6 isoform 1 [Felis catus]
gi|281349541|gb|EFB25125.1| hypothetical protein PANDA_000658 [Ailuropoda melanoleuca]
gi|440899268|gb|ELR50597.1| Homeobox protein Hox-A6 [Bos grunniens mutus]
Length = 233
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 67/100 (67%), Positives = 73/100 (73%), Gaps = 9/100 (9%)
Query: 219 NTSASLPSPLYPWMRSQFER---------KRGRQTYTRYQTLELEKEFHFNRYLTRRRRI 269
T SP+YPWM+ +RGRQTYTRYQTLELEKEFHFNRYLTRRRRI
Sbjct: 127 GTDRKYTSPVYPWMQRMNSCAGAVYGSHGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRI 186
Query: 270 EIAHALCLTERQIKIWFQNRRMKWKKENKSKDGGSDAGSD 309
EIA+ALCLTERQIKIWFQNRRMKWKKENK + +G D
Sbjct: 187 EIANALCLTERQIKIWFQNRRMKWKKENKLINSTQPSGED 226
>gi|301617261|ref|XP_002938071.1| PREDICTED: homeobox protein Hox-B7-A-like [Xenopus (Silurana)
tropicalis]
Length = 110
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 61/63 (96%), Positives = 63/63 (100%)
Query: 237 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
+RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE
Sbjct: 29 DRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 88
Query: 297 NKS 299
NK+
Sbjct: 89 NKA 91
>gi|348564432|ref|XP_003468009.1| PREDICTED: homeobox protein Hox-A6-like [Cavia porcellus]
Length = 233
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 66/93 (70%), Positives = 72/93 (77%), Gaps = 9/93 (9%)
Query: 226 SPLYPWMRSQFER---------KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALC 276
SP+YPWM+ +RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIA+ALC
Sbjct: 134 SPVYPWMQRMNSCAGAVYGSHGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIANALC 193
Query: 277 LTERQIKIWFQNRRMKWKKENKSKDGGSDAGSD 309
LTERQIKIWFQNRRMKWKKENK + +G D
Sbjct: 194 LTERQIKIWFQNRRMKWKKENKLINSTQPSGED 226
>gi|402863886|ref|XP_003896223.1| PREDICTED: homeobox protein Hox-A6-like, partial [Papio anubis]
Length = 227
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 66/93 (70%), Positives = 72/93 (77%), Gaps = 9/93 (9%)
Query: 226 SPLYPWMRSQFER---------KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALC 276
SP+YPWM+ +RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIA+ALC
Sbjct: 134 SPVYPWMQRMNSCAGAVYGSHGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIANALC 193
Query: 277 LTERQIKIWFQNRRMKWKKENKSKDGGSDAGSD 309
LTERQIKIWFQNRRMKWKKENK + +G D
Sbjct: 194 LTERQIKIWFQNRRMKWKKENKLINSTQPSGED 226
>gi|297288644|ref|XP_001092687.2| PREDICTED: homeobox protein Hox-A5-like isoform 2 [Macaca mulatta]
Length = 468
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 62/83 (74%), Positives = 65/83 (78%), Gaps = 9/83 (10%)
Query: 228 LYPWMRSQF---------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWMR E KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+
Sbjct: 374 IYPWMRKLHISHDNIGGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLS 433
Query: 279 ERQIKIWFQNRRMKWKKENKSKD 301
ERQIKIWFQNRRMKWKK+NK K
Sbjct: 434 ERQIKIWFQNRRMKWKKDNKLKS 456
>gi|190576600|gb|ACE79088.1| homeobox A5 (predicted) [Sorex araneus]
Length = 468
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 62/83 (74%), Positives = 65/83 (78%), Gaps = 9/83 (10%)
Query: 228 LYPWMRSQF---------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWMR E KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+
Sbjct: 374 IYPWMRKLHISHDNIGGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLS 433
Query: 279 ERQIKIWFQNRRMKWKKENKSKD 301
ERQIKIWFQNRRMKWKK+NK K
Sbjct: 434 ERQIKIWFQNRRMKWKKDNKLKS 456
>gi|241756294|ref|XP_002406399.1| fushi tarazu, putative [Ixodes scapularis]
gi|215506136|gb|EEC15630.1| fushi tarazu, putative [Ixodes scapularis]
Length = 96
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 64/72 (88%), Positives = 67/72 (93%), Gaps = 1/72 (1%)
Query: 237 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
+RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE
Sbjct: 10 QRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 69
Query: 297 NKSK-DGGSDAG 307
NK+K + G G
Sbjct: 70 NKAKLEAGLALG 81
>gi|311275742|ref|XP_003134887.1| PREDICTED: homeobox protein Hox-A6-like [Sus scrofa]
Length = 233
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 67/100 (67%), Positives = 73/100 (73%), Gaps = 9/100 (9%)
Query: 219 NTSASLPSPLYPWMRSQFER---------KRGRQTYTRYQTLELEKEFHFNRYLTRRRRI 269
T SP+YPWM+ +RGRQTYTRYQTLELEKEFHFNRYLTRRRRI
Sbjct: 127 GTDRKYTSPVYPWMQRMNSCAGAVYGSHGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRI 186
Query: 270 EIAHALCLTERQIKIWFQNRRMKWKKENKSKDGGSDAGSD 309
EIA+ALCLTERQIKIWFQNRRMKWKKENK + +G D
Sbjct: 187 EIANALCLTERQIKIWFQNRRMKWKKENKLINSTQPSGED 226
>gi|119370774|sp|Q1KL14.1|HXA5A_FUGRU RecName: Full=Homeobox protein Hox-A5a
gi|94482760|gb|ABF22380.1| homeobox protein HoxA5a [Takifugu rubripes]
Length = 274
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 72/141 (51%), Positives = 84/141 (59%), Gaps = 9/141 (6%)
Query: 168 QQQPQQPPPQHMMYAQQPPPQHHQVVVNHQQTPPNQPPSQPPNQPPNQQPNNTSASLPSP 227
+ QPQ ++ + ++VN + P + P N + S
Sbjct: 121 ETQPQHRVVKNSVTTPCSSSSGGTLLVN-RDCASKSSPLEEEKPAGGATPQNVNDSTQPQ 179
Query: 228 LYPWMR--------SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
+YPWMR S E KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+E
Sbjct: 180 IYPWMRKIHISHELSGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSE 239
Query: 280 RQIKIWFQNRRMKWKKENKSK 300
RQIKIWFQNRRMKWKK+NK K
Sbjct: 240 RQIKIWFQNRRMKWKKDNKLK 260
>gi|431909015|gb|ELK12606.1| Homeobox protein Hox-A6 [Pteropus alecto]
Length = 233
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 65/89 (73%), Positives = 69/89 (77%), Gaps = 9/89 (10%)
Query: 219 NTSASLPSPLYPWMRSQFER---------KRGRQTYTRYQTLELEKEFHFNRYLTRRRRI 269
T SP+YPWM+ +RGRQTYTRYQTLELEKEFHFNRYLTRRRRI
Sbjct: 127 GTDRKYTSPVYPWMQRMNSCAGAVYGSHGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRI 186
Query: 270 EIAHALCLTERQIKIWFQNRRMKWKKENK 298
EIA+ALCLTERQIKIWFQNRRMKWKKENK
Sbjct: 187 EIANALCLTERQIKIWFQNRRMKWKKENK 215
>gi|344270548|ref|XP_003407106.1| PREDICTED: homeobox protein Hox-A5-like [Loxodonta africana]
Length = 267
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/80 (77%), Positives = 65/80 (81%), Gaps = 6/80 (7%)
Query: 228 LYPWMRSQF------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQ 281
+YPWMR E KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+ERQ
Sbjct: 176 IYPWMRKLHISHGGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQ 235
Query: 282 IKIWFQNRRMKWKKENKSKD 301
IKIWFQNRRMKWKK+NK K
Sbjct: 236 IKIWFQNRRMKWKKDNKLKS 255
>gi|363730024|ref|XP_003640748.1| PREDICTED: homeobox protein Hox-A6-like [Gallus gallus]
gi|363730225|ref|XP_003640785.1| PREDICTED: homeobox protein Hox-A6-like isoform 2 [Gallus gallus]
Length = 214
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 65/88 (73%), Positives = 69/88 (78%), Gaps = 9/88 (10%)
Query: 220 TSASLPSPLYPWMRSQFER---------KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIE 270
T SP+YPWM+ +RGRQTYTRYQTLELEKEFHFNRYLTRRRRIE
Sbjct: 109 TDRKYTSPVYPWMQRMNSCAGTVYGAHGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIE 168
Query: 271 IAHALCLTERQIKIWFQNRRMKWKKENK 298
IA+ALCLTERQIKIWFQNRRMKWKKENK
Sbjct: 169 IANALCLTERQIKIWFQNRRMKWKKENK 196
>gi|184185535|gb|ACC68936.1| homeobox A6 (predicted) [Rhinolophus ferrumequinum]
Length = 233
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 65/88 (73%), Positives = 69/88 (78%), Gaps = 9/88 (10%)
Query: 220 TSASLPSPLYPWMRSQFER---------KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIE 270
T SP+YPWM+ +RGRQTYTRYQTLELEKEFHFNRYLTRRRRIE
Sbjct: 128 TDRKYTSPVYPWMQRMNSCAGAVYGSHGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIE 187
Query: 271 IAHALCLTERQIKIWFQNRRMKWKKENK 298
IA+ALCLTERQIKIWFQNRRMKWKKENK
Sbjct: 188 IANALCLTERQIKIWFQNRRMKWKKENK 215
>gi|4322040|gb|AAD15930.1| homeobox protein [Petromyzon marinus]
gi|429510506|gb|AFZ94991.1| transcription factor Hox6 [Petromyzon marinus]
Length = 248
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/79 (78%), Positives = 67/79 (84%), Gaps = 9/79 (11%)
Query: 227 PLYPWMRSQ---------FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 277
P+YPWM+ +R+RGRQTY+RYQTLELEKEFHFNRYLTRRRRIEIAHALCL
Sbjct: 142 PIYPWMQRMNSHNGLGLGTDRRRGRQTYSRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 201
Query: 278 TERQIKIWFQNRRMKWKKE 296
TERQIKIWFQNRRMKWKKE
Sbjct: 202 TERQIKIWFQNRRMKWKKE 220
>gi|363730022|ref|XP_003640747.1| PREDICTED: homeobox protein Hox-A5-like [Gallus gallus]
gi|363730036|ref|XP_003640753.1| PREDICTED: homeobox protein Hox-A5-like [Gallus gallus]
gi|363730108|ref|XP_003640770.1| PREDICTED: homeobox protein Hox-A5-like [Gallus gallus]
gi|60392398|sp|Q6B3N0.1|HXA5_CHICK RecName: Full=Homeobox protein Hox-A5
gi|50956652|gb|AAT90845.1| homeodomain transcription factor [Gallus gallus]
Length = 270
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/113 (60%), Positives = 75/113 (66%), Gaps = 11/113 (9%)
Query: 199 TPPNQPPSQPPNQPPNQQPNNTSASLPSP--LYPWMRSQF---------ERKRGRQTYTR 247
T P + P++ S + PS +YPWMR E KR R YTR
Sbjct: 145 TSSGTEEDTPASSEQASAPSDQSTAQPSQPQIYPWMRKLHISHDNIGGPEGKRARTAYTR 204
Query: 248 YQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSK 300
YQTLELEKEFHFNRYLTRRRRIEIAHALCL+ERQIKIWFQNRRMKWKK+NK K
Sbjct: 205 YQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNKLK 257
>gi|86560752|gb|ABD04657.1| Hox7 homeobox protein [Alitta virens]
Length = 89
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/67 (94%), Positives = 64/67 (95%)
Query: 237 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAH+LCLTERQIKIWFQNRRMKWKKE
Sbjct: 2 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHSLCLTERQIKIWFQNRRMKWKKE 61
Query: 297 NKSKDGG 303
NK D G
Sbjct: 62 NKIVDNG 68
>gi|14916596|sp|Q9IA24.1|HXA6_HETFR RecName: Full=Homeobox protein Hox-A6
gi|7271833|gb|AAF44644.1|AF224262_6 HoxA6 [Heterodontus francisci]
Length = 229
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/119 (59%), Positives = 85/119 (71%), Gaps = 14/119 (11%)
Query: 205 PSQPPNQPPNQQPNNTSASLPSPLYPWMR-------SQF--ERKRGRQTYTRYQTLELEK 255
P N+ +++ N+ S +P+YPWM+ S F +RGRQTYTR+QTLELEK
Sbjct: 111 PDCAQNKILSEEGNDRKYS--TPIYPWMQRMNSSSSSVFGPHGRRGRQTYTRFQTLELEK 168
Query: 256 EFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK---SKDGGSDAGSDIT 311
EFHFNRYLTRRRRIEIA+ALCLTERQIKIWFQNRRMKWKKENK + + S+ D T
Sbjct: 169 EFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKENKLLNTTESNSEEAEDKT 227
>gi|444517710|gb|ELV11728.1| Homeobox protein Hox-B5 [Tupaia chinensis]
Length = 230
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/191 (42%), Positives = 95/191 (49%), Gaps = 39/191 (20%)
Query: 131 GIIPGPESPNDLVDPTLNNHHHHQHHHMNHHPHPHPQQQQPQQPPPQHMMYAQQPPPQHH 190
G P SP+D P ++ + + + P Q P + QP P
Sbjct: 70 GTKPSASSPSDQATPASSSANFTEIDEASASSEPEEAASQLSSPS----LARAQPEPM-- 123
Query: 191 QVVVNHQQTPPNQPPSQPPNQPPNQQPNNTSASLPSPLYPWMRSQF--------ERKRGR 242
TPP P Q P ++PWMR + KR R
Sbjct: 124 -------ATPPAAPEGQTPQ-----------------IFPWMRKLHISHDMTGPDGKRAR 159
Query: 243 QTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSKDG 302
YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+ERQIKIWFQNRRMKWKK+NK K
Sbjct: 160 TAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNKLKSM 219
Query: 303 G-SDAGSDITP 312
+ AGS P
Sbjct: 220 SLATAGSAFQP 230
>gi|355753957|gb|EHH57922.1| hypothetical protein EGM_07667 [Macaca fascicularis]
Length = 224
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 64/82 (78%), Positives = 70/82 (85%), Gaps = 9/82 (10%)
Query: 226 SPLYPWMR-------SQF--ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALC 276
+P+YPWM+ S F +RGRQTYTRYQTLELEKEFH+NRYLTRRRRIEIAHALC
Sbjct: 125 TPVYPWMQRMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALC 184
Query: 277 LTERQIKIWFQNRRMKWKKENK 298
LTERQIKIWFQNRRMKWKKE+K
Sbjct: 185 LTERQIKIWFQNRRMKWKKESK 206
>gi|410952546|ref|XP_003982940.1| PREDICTED: homeobox protein Hox-A7 [Felis catus]
Length = 218
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/67 (92%), Positives = 64/67 (95%), Gaps = 1/67 (1%)
Query: 228 LYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWMRS +RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF
Sbjct: 124 IYPWMRSSGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 183
Query: 287 QNRRMKW 293
QNRRMKW
Sbjct: 184 QNRRMKW 190
>gi|395830948|ref|XP_003788574.1| PREDICTED: homeobox protein Hox-A5 [Otolemur garnettii]
gi|202070727|gb|ACH95315.1| homeobox A5 (predicted) [Otolemur garnettii]
Length = 270
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/82 (75%), Positives = 65/82 (79%), Gaps = 9/82 (10%)
Query: 228 LYPWMRSQF---------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWMR E KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+
Sbjct: 176 IYPWMRKLHISHDNIGGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLS 235
Query: 279 ERQIKIWFQNRRMKWKKENKSK 300
ERQIKIWFQNRRMKWKK+NK K
Sbjct: 236 ERQIKIWFQNRRMKWKKDNKLK 257
>gi|255742434|gb|ACU32549.1| homeobox protein HoxA6 [Callorhinchus milii]
Length = 229
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/98 (68%), Positives = 78/98 (79%), Gaps = 11/98 (11%)
Query: 210 NQPPNQQPNNTSASLPSPLYPWMR-------SQF--ERKRGRQTYTRYQTLELEKEFHFN 260
N+ +++ N+ S +P+YPWM+ S F +RGRQTYTR+QTLELEKEFHFN
Sbjct: 116 NKFLSEEANDRKYS--TPIYPWMQRMNSSSSSVFGPHGRRGRQTYTRFQTLELEKEFHFN 173
Query: 261 RYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
RYLTRRRRIEIA+ALCLTERQIKIWFQNRRMKWKKENK
Sbjct: 174 RYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKENK 211
>gi|305377066|ref|NP_001182161.1| homeobox protein Hox-A5 [Sus scrofa]
gi|217620801|gb|ACK56050.1| homeobox A5 [Sus scrofa]
gi|217620820|gb|ACK56051.1| homeobox A5 [Sus scrofa]
Length = 270
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/83 (74%), Positives = 65/83 (78%), Gaps = 9/83 (10%)
Query: 228 LYPWMRSQF---------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWMR E KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+
Sbjct: 176 IYPWMRKLHISHDNIGGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLS 235
Query: 279 ERQIKIWFQNRRMKWKKENKSKD 301
ERQIKIWFQNRRMKWKK+NK K
Sbjct: 236 ERQIKIWFQNRRMKWKKDNKLKS 258
>gi|149705654|ref|XP_001499628.1| PREDICTED: homeobox protein Hox-A5-like [Equus caballus]
Length = 270
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/83 (74%), Positives = 65/83 (78%), Gaps = 9/83 (10%)
Query: 228 LYPWMRSQF---------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWMR E KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+
Sbjct: 176 IYPWMRKLHISHDNIGGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLS 235
Query: 279 ERQIKIWFQNRRMKWKKENKSKD 301
ERQIKIWFQNRRMKWKK+NK K
Sbjct: 236 ERQIKIWFQNRRMKWKKDNKLKS 258
>gi|146324917|sp|A2D5Y4.1|HXA5_LEMCA RecName: Full=Homeobox protein Hox-A5
gi|122938186|gb|ABM68948.1| HOXA5 [Lemur catta]
Length = 270
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/83 (74%), Positives = 65/83 (78%), Gaps = 9/83 (10%)
Query: 228 LYPWMRSQF---------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWMR E KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+
Sbjct: 176 IYPWMRKLHISHDNIGGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLS 235
Query: 279 ERQIKIWFQNRRMKWKKENKSKD 301
ERQIKIWFQNRRMKWKK+NK K
Sbjct: 236 ERQIKIWFQNRRMKWKKDNKLKS 258
>gi|146324918|sp|A1YGK7.1|HXA7_PANPA RecName: Full=Homeobox protein Hox-A7
gi|121484170|gb|ABM54432.1| HOXA7 [Pan paniscus]
Length = 230
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/72 (86%), Positives = 65/72 (90%), Gaps = 1/72 (1%)
Query: 228 LYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWMRS +RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIE HALCLTERQI WF
Sbjct: 119 IYPWMRSSGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEXXHALCLTERQIXXWF 178
Query: 287 QNRRMKWKKENK 298
QNRRMKWKKE+K
Sbjct: 179 QNRRMKWKKEHK 190
>gi|355568482|gb|EHH24763.1| hypothetical protein EGK_08478 [Macaca mulatta]
Length = 224
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 64/82 (78%), Positives = 70/82 (85%), Gaps = 9/82 (10%)
Query: 226 SPLYPWMR-------SQF--ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALC 276
+P+YPWM+ S F +RGRQTYTRYQTLELEKEFH+NRYLTRRRRIEIAHALC
Sbjct: 125 TPVYPWMQRMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALC 184
Query: 277 LTERQIKIWFQNRRMKWKKENK 298
LTERQIKIWFQNRRMKWKKE+K
Sbjct: 185 LTERQIKIWFQNRRMKWKKESK 206
>gi|301128874|emb|CBL59338.1| HoxA6 [Scyliorhinus canicula]
Length = 229
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 64/82 (78%), Positives = 70/82 (85%), Gaps = 9/82 (10%)
Query: 226 SPLYPWMR-------SQF--ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALC 276
+P+YPWM+ S F +RGRQTYTR+QTLELEKEFHFNRYLTRRRRIEIA+ALC
Sbjct: 130 TPIYPWMQRMNSSSSSVFGPHGRRGRQTYTRFQTLELEKEFHFNRYLTRRRRIEIANALC 189
Query: 277 LTERQIKIWFQNRRMKWKKENK 298
LTERQIKIWFQNRRMKWKKENK
Sbjct: 190 LTERQIKIWFQNRRMKWKKENK 211
>gi|410934531|gb|AFV93982.1| homeodomain-containing protein Hox8, partial [Branchiostoma
lanceolatum]
Length = 199
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/118 (62%), Positives = 81/118 (68%), Gaps = 10/118 (8%)
Query: 197 QQTPPNQPPSQPPNQPPNQQPNNTSASLPSPLYPWMRSQF-ERKRGRQTYTRYQTLELEK 255
QQ P Q +P QQ + L P YPWMR+ ER+RGRQTY+RYQTLELEK
Sbjct: 85 QQRPSCQQEEKPTTMGMAQQ-----SQLAIPFYPWMRTAGPERRRGRQTYSRYQTLELEK 139
Query: 256 EFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKS----KDGGSDAGSD 309
EFHFNRYLTRRRRIEIAHAL LTERQIKIWFQNRRMK KKE K G++ SD
Sbjct: 140 EFHFNRYLTRRRRIEIAHALGLTERQIKIWFQNRRMKLKKEAAMLCPPKVEGTEKSSD 197
>gi|402899485|ref|XP_003912726.1| PREDICTED: homeobox protein Hox-B6 [Papio anubis]
Length = 224
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 64/82 (78%), Positives = 70/82 (85%), Gaps = 9/82 (10%)
Query: 226 SPLYPWMR-------SQF--ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALC 276
+P+YPWM+ S F +RGRQTYTRYQTLELEKEFH+NRYLTRRRRIEIAHALC
Sbjct: 125 TPVYPWMQRMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALC 184
Query: 277 LTERQIKIWFQNRRMKWKKENK 298
LTERQIKIWFQNRRMKWKKE+K
Sbjct: 185 LTERQIKIWFQNRRMKWKKESK 206
>gi|400180339|gb|AFP73306.1| Hoxa5beta [Polyodon spathula]
Length = 270
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/100 (67%), Positives = 72/100 (72%), Gaps = 9/100 (9%)
Query: 211 QPPNQQPNNTSASLPSPLYPWMRS-----QF----ERKRGRQTYTRYQTLELEKEFHFNR 261
Q +Q N S S +YPWMR F E KR R YTRYQ+LELEKEFHFNR
Sbjct: 161 QTSSQNCQNASESSQPQIYPWMRKLHTSHDFMAGPEGKRARTAYTRYQSLELEKEFHFNR 220
Query: 262 YLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSKD 301
YLTRRRRIEIAHALCL+ERQIKIWFQNRRMKWKK+NK K
Sbjct: 221 YLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNKLKS 260
>gi|220898181|gb|ACL81437.1| HoxA5 [Latimeria menadoensis]
Length = 268
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/101 (68%), Positives = 74/101 (73%), Gaps = 13/101 (12%)
Query: 211 QPPNQQPNNTSASLPSP--LYPWMRSQF---------ERKRGRQTYTRYQTLELEKEFHF 259
QP +Q N S + PS +YPWMR E KR R YTRYQTLELEKEFHF
Sbjct: 157 QPSSQ--NGQSTAQPSQPQIYPWMRKLHISHDSIGGPEGKRARTAYTRYQTLELEKEFHF 214
Query: 260 NRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSK 300
NRYLTRRRRIEIAHALCL+ERQIKIWFQNRRMKWKK+NK K
Sbjct: 215 NRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNKLK 255
>gi|332259419|ref|XP_003278787.1| PREDICTED: homeobox protein Hox-B6-like [Nomascus leucogenys]
Length = 224
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 64/84 (76%), Positives = 70/84 (83%), Gaps = 9/84 (10%)
Query: 224 LPSPLYPWMR-------SQF--ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHA 274
+P+YPWM+ S F +RGRQTYTRYQTLELEKEFH+NRYLTRRRRIEIAHA
Sbjct: 123 CSTPVYPWMQRMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHA 182
Query: 275 LCLTERQIKIWFQNRRMKWKKENK 298
LCLTERQIKIWFQNRRMKWKKE+K
Sbjct: 183 LCLTERQIKIWFQNRRMKWKKESK 206
>gi|62826028|gb|AAH94172.1| Unknown (protein for MGC:115122) [Xenopus laevis]
Length = 234
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/94 (67%), Positives = 73/94 (77%), Gaps = 12/94 (12%)
Query: 228 LYPWMRSQ---------FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWM+ +R+RGRQ Y+RYQTLELEKEFHFNRYLTRRRRIEIA+ALCLT
Sbjct: 122 IYPWMQRMNSHSGVGYGTDRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLT 181
Query: 279 ERQIKIWFQNRRMKWKKEN---KSKDGGSDAGSD 309
ERQIKIWFQNRRMKWKKE+ + GG+ A +D
Sbjct: 182 ERQIKIWFQNRRMKWKKESNLTSTLSGGTGAAAD 215
>gi|254212176|gb|ACT65751.1| Hoxa6 [Leucoraja erinacea]
Length = 229
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/82 (78%), Positives = 70/82 (85%), Gaps = 9/82 (10%)
Query: 226 SPLYPWMR-------SQF--ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALC 276
+P+YPWM+ S F +RGRQTYTR+QTLELEKEFHFNRYLTRRRRIEIA+ALC
Sbjct: 130 TPIYPWMQRMNSSSSSVFGPHGRRGRQTYTRFQTLELEKEFHFNRYLTRRRRIEIANALC 189
Query: 277 LTERQIKIWFQNRRMKWKKENK 298
LTERQIKIWFQNRRMKWKKENK
Sbjct: 190 LTERQIKIWFQNRRMKWKKENK 211
>gi|74267511|dbj|BAE44254.1| hoxA7a [Oryzias latipes]
gi|83016928|dbj|BAE53460.1| hoxA7a [Oryzias latipes]
Length = 215
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 60/76 (78%), Positives = 69/76 (90%), Gaps = 1/76 (1%)
Query: 228 LYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWM++ RKRGRQTY+RYQTLELEKEFHFNRYL+RRRR+EIAHAL LTERQIKIWF
Sbjct: 112 MYPWMQASDPNRKRGRQTYSRYQTLELEKEFHFNRYLSRRRRVEIAHALTLTERQIKIWF 171
Query: 287 QNRRMKWKKENKSKDG 302
QNRRMKWKK++K + G
Sbjct: 172 QNRRMKWKKDHKEQSG 187
>gi|351704295|gb|EHB07214.1| Homeobox protein Hox-A5 [Heterocephalus glaber]
Length = 215
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/102 (62%), Positives = 69/102 (67%), Gaps = 9/102 (8%)
Query: 208 PPNQPPNQQPNNTSASLPSPLYPWMRSQF---------ERKRGRQTYTRYQTLELEKEFH 258
Q Q + + +YPWMR E KR R YTRYQTLELEKEFH
Sbjct: 101 SSEQASAQNEPSPAPPAQPQIYPWMRKLHISHDNIGGPEGKRARTAYTRYQTLELEKEFH 160
Query: 259 FNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSK 300
FNRYLTRRRRIEIAHALCL+ERQIKIWFQNRRMKWKK+NK K
Sbjct: 161 FNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNKLK 202
>gi|24497517|ref|NP_061975.2| homeobox protein Hox-A5 [Homo sapiens]
gi|52788238|sp|P20719.2|HXA5_HUMAN RecName: Full=Homeobox protein Hox-A5; AltName: Full=Homeobox
protein Hox-1C
gi|15489147|gb|AAH13682.1| Homeobox A5 [Homo sapiens]
gi|32879831|gb|AAP88746.1| homeo box A5 [Homo sapiens]
gi|49457506|emb|CAG47052.1| HOXA5 [Homo sapiens]
gi|51094979|gb|EAL24223.1| homeo box A5 [Homo sapiens]
gi|61360384|gb|AAX41854.1| homeobox A5 [synthetic construct]
gi|119614279|gb|EAW93873.1| homeobox A5 [Homo sapiens]
gi|123994171|gb|ABM84687.1| homeobox A5 [synthetic construct]
gi|124126875|gb|ABM92210.1| homeobox A5 [synthetic construct]
gi|306921749|dbj|BAJ17954.1| homeobox A5 [synthetic construct]
Length = 270
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/82 (75%), Positives = 65/82 (79%), Gaps = 9/82 (10%)
Query: 228 LYPWMRSQF---------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWMR E KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+
Sbjct: 176 IYPWMRKLHISHDNIGGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLS 235
Query: 279 ERQIKIWFQNRRMKWKKENKSK 300
ERQIKIWFQNRRMKWKK+NK K
Sbjct: 236 ERQIKIWFQNRRMKWKKDNKLK 257
>gi|213514446|ref|NP_001133033.1| homeobox protein HoxA7aa [Salmo salar]
gi|157816041|gb|ABV82039.1| homeobox protein HoxA7aa [Salmo salar]
gi|158702220|gb|ABW77441.1| homeobox protein HoxA7aa [Salmo salar]
Length = 247
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 60/83 (72%), Positives = 71/83 (85%), Gaps = 1/83 (1%)
Query: 228 LYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWM++ RKRGRQTY+RYQTLE+EKEFHFNRYLTRRRR+EIA LCLTERQIKIWF
Sbjct: 113 MYPWMKTSDPNRKRGRQTYSRYQTLEMEKEFHFNRYLTRRRRVEIAQVLCLTERQIKIWF 172
Query: 287 QNRRMKWKKENKSKDGGSDAGSD 309
QNRRMKWKK++K + S G++
Sbjct: 173 QNRRMKWKKDHKDESSSSTPGAN 195
>gi|14916584|sp|Q9IA11.1|HXD5_HETFR RecName: Full=Homeobox protein Hox-D5
gi|7271819|gb|AAF44631.1|AF224263_1 HoxD5 [Heterodontus francisci]
Length = 252
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/192 (41%), Positives = 94/192 (48%), Gaps = 10/192 (5%)
Query: 119 YASCKLQAAVGNGIIPGPESPNDLVDPTLNNHHHHQHHHMNHHPHPHPQQQQPQQPPPQH 178
Y L N + G + T +N H+ P+P P
Sbjct: 48 YTGIDLSMTRSNSNLCGDSERSTNYLQTASNTFHNSSGVKIKSPNPAFCSGSLISPSDSA 107
Query: 179 MMYAQQPPPQHHQVVVNHQQTPPNQPPSQPPNQP-PNQQPNNTSASLPSPLYPWMR---- 233
+ H N +P N + N P P + +L +YPWM+
Sbjct: 108 IKMGANITEPSHSYSGNQDTSPVNDKHPKGTNSPKPENGQLDKDPALQMQIYPWMKKMHL 167
Query: 234 -----SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQN 288
S E KR R YTRYQTLELEKEFH+NRYLTRRRRIEIAHALCLTERQIKIWFQN
Sbjct: 168 NQEGLSGLEGKRTRTAYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQN 227
Query: 289 RRMKWKKENKSK 300
RRMKWKK+NK K
Sbjct: 228 RRMKWKKDNKLK 239
>gi|444713455|gb|ELW54354.1| Homeobox protein Hox-A5 [Tupaia chinensis]
Length = 163
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/103 (62%), Positives = 69/103 (66%), Gaps = 9/103 (8%)
Query: 208 PPNQPPNQQPNNTSASLPSPLYPWMRSQF---------ERKRGRQTYTRYQTLELEKEFH 258
Q Q + + +YPWMR E KR R YTRYQTLELEKEFH
Sbjct: 49 SSEQASAQSEPSPAPPAQPQIYPWMRKLHISHDNIGGPEGKRARTAYTRYQTLELEKEFH 108
Query: 259 FNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSKD 301
FNRYLTRRRRIEIAHALCL+ERQIKIWFQNRRMKWKK+NK K
Sbjct: 109 FNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNKLKS 151
>gi|444517711|gb|ELV11729.1| Homeobox protein Hox-B6 [Tupaia chinensis]
Length = 224
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/82 (78%), Positives = 70/82 (85%), Gaps = 9/82 (10%)
Query: 226 SPLYPWMR-------SQF--ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALC 276
+P+YPWM+ S F +RGRQTYTRYQTLELEKEFH+NRYLTRRRRIEIAHALC
Sbjct: 125 TPVYPWMQRMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALC 184
Query: 277 LTERQIKIWFQNRRMKWKKENK 298
LTERQIKIWFQNRRMKWKKE+K
Sbjct: 185 LTERQIKIWFQNRRMKWKKESK 206
>gi|354474764|ref|XP_003499600.1| PREDICTED: homeobox protein Hox-B6-like [Cricetulus griseus]
gi|344249141|gb|EGW05245.1| Homeobox protein Hox-B6 [Cricetulus griseus]
Length = 224
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/82 (78%), Positives = 70/82 (85%), Gaps = 9/82 (10%)
Query: 226 SPLYPWMR-------SQF--ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALC 276
+P+YPWM+ S F +RGRQTYTRYQTLELEKEFH+NRYLTRRRRIEIAHALC
Sbjct: 125 TPVYPWMQRMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALC 184
Query: 277 LTERQIKIWFQNRRMKWKKENK 298
LTERQIKIWFQNRRMKWKKE+K
Sbjct: 185 LTERQIKIWFQNRRMKWKKESK 206
>gi|31323433|gb|AAP47018.1| HOX6/7 [Diplosoma listerianum]
Length = 126
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/80 (77%), Positives = 69/80 (86%), Gaps = 5/80 (6%)
Query: 228 LYPWMR---SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKI 284
+YPWMR SQ R+R RQTY+RYQTLELEKEFH+NRYLTRRRRIEIA+ALCL+ERQIKI
Sbjct: 1 VYPWMRQHGSQ--RRRSRQTYSRYQTLELEKEFHYNRYLTRRRRIEIANALCLSERQIKI 58
Query: 285 WFQNRRMKWKKENKSKDGGS 304
WFQNRRMKWK+ENK S
Sbjct: 59 WFQNRRMKWKRENKDSSSNS 78
>gi|32879829|gb|AAP88745.1| homeo box A5 [synthetic construct]
gi|61370206|gb|AAX43454.1| homeobox A5 [synthetic construct]
gi|61370212|gb|AAX43455.1| homeobox A5 [synthetic construct]
Length = 271
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/82 (75%), Positives = 65/82 (79%), Gaps = 9/82 (10%)
Query: 228 LYPWMRSQF---------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWMR E KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+
Sbjct: 176 IYPWMRKLHISHDNIGGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLS 235
Query: 279 ERQIKIWFQNRRMKWKKENKSK 300
ERQIKIWFQNRRMKWKK+NK K
Sbjct: 236 ERQIKIWFQNRRMKWKKDNKLK 257
>gi|60654293|gb|AAX29839.1| homeobox B6 [synthetic construct]
Length = 225
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/82 (78%), Positives = 70/82 (85%), Gaps = 9/82 (10%)
Query: 226 SPLYPWMR-------SQF--ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALC 276
+P+YPWM+ S F +RGRQTYTRYQTLELEKEFH+NRYLTRRRRIEIAHALC
Sbjct: 125 TPVYPWMQRMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALC 184
Query: 277 LTERQIKIWFQNRRMKWKKENK 298
LTERQIKIWFQNRRMKWKKE+K
Sbjct: 185 LTERQIKIWFQNRRMKWKKESK 206
>gi|397472867|ref|XP_003807955.1| PREDICTED: homeobox protein Hox-A5 [Pan paniscus]
Length = 270
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/82 (75%), Positives = 65/82 (79%), Gaps = 9/82 (10%)
Query: 228 LYPWMRSQF---------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWMR E KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+
Sbjct: 176 IYPWMRKLHISHDNIGGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLS 235
Query: 279 ERQIKIWFQNRRMKWKKENKSK 300
ERQIKIWFQNRRMKWKK+NK K
Sbjct: 236 ERQIKIWFQNRRMKWKKDNKLK 257
>gi|387668|gb|AAA58663.1| HOX 1.3 [Homo sapiens]
Length = 270
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/82 (75%), Positives = 65/82 (79%), Gaps = 9/82 (10%)
Query: 228 LYPWMRSQF---------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWMR E KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+
Sbjct: 176 IYPWMRKLHISHDNIGGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLS 235
Query: 279 ERQIKIWFQNRRMKWKKENKSK 300
ERQIKIWFQNRRMKWKK+NK K
Sbjct: 236 ERQIKIWFQNRRMKWKKDNKLK 257
>gi|410911238|ref|XP_003969097.1| PREDICTED: homeobox protein Hox-A5a-like [Takifugu rubripes]
Length = 242
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 66/92 (71%), Positives = 70/92 (76%), Gaps = 8/92 (8%)
Query: 217 PNNTSASLPSPLYPWMR--------SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRR 268
P N + S +YPWMR S E KR R YTRYQTLELEKEFHFNRYLTRRRR
Sbjct: 137 PQNVNDSTQPQIYPWMRKIHISHELSGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRR 196
Query: 269 IEIAHALCLTERQIKIWFQNRRMKWKKENKSK 300
IEIAHALCL+ERQIKIWFQNRRMKWKK+NK K
Sbjct: 197 IEIAHALCLSERQIKIWFQNRRMKWKKDNKLK 228
>gi|400180325|gb|AFP73293.1| Hoxa7alpha [Polyodon spathula]
Length = 210
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/75 (82%), Positives = 68/75 (90%), Gaps = 1/75 (1%)
Query: 228 LYPWMR-SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWMR S + KRGRQ YTRYQTLELEKEFHF+RYLTRRRR+EIAHALCLTERQIKIWF
Sbjct: 120 MYPWMRTSGGDGKRGRQNYTRYQTLELEKEFHFSRYLTRRRRVEIAHALCLTERQIKIWF 179
Query: 287 QNRRMKWKKENKSKD 301
QNRRMKWKKE+ K+
Sbjct: 180 QNRRMKWKKEHMDKN 194
>gi|254692758|dbj|BAH23874.2| transcription factor Hox5 [Balanoglossus misakiensis]
Length = 241
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/170 (44%), Positives = 93/170 (54%), Gaps = 24/170 (14%)
Query: 155 HHHMNHHPHPH-PQQQQPQQPPPQHMMYAQQPPPQHHQVVVNHQQTPPNQPPSQPPNQPP 213
+ + N H P+ P + QPP + + P + + N + TP + + P P
Sbjct: 46 YQYSNQHDTPYYPTETSVLQPPVNNRL-THTPTHSSYNIAANMETTPISATRNTPSTSPT 104
Query: 214 --------------NQQPNNTSASLPSPLYPWMRSQ--------FERKRGRQTYTRYQTL 251
N N+ ++ S +YPWMR E KR R YTRYQTL
Sbjct: 105 LENGLGNGMNGAEKNTGNNSVNSQSDSMVYPWMRKMHMSSGANGMEAKRSRTAYTRYQTL 164
Query: 252 ELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSKD 301
ELEKEFHFNRYLTRRRRIEIAHAL L+ERQIKIWFQNRRMKWKKE+ K
Sbjct: 165 ELEKEFHFNRYLTRRRRIEIAHALGLSERQIKIWFQNRRMKWKKEHNVKS 214
>gi|38016605|gb|AAR07636.1| transcription factor Hox5 [Ptychodera flava]
Length = 238
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/164 (45%), Positives = 88/164 (53%), Gaps = 23/164 (14%)
Query: 160 HHPHPHPQQQQPQQPPPQHMMYAQQPPPQHHQVVVNHQQTPPNQPPSQPPNQPP------ 213
H +P + QPP + + P + + N + TP + + P P
Sbjct: 52 HDTAYYPTESSVLQPPVSNRL-THTPTHTSYNIAANMESTPISAARNTPSTSPSLENGLA 110
Query: 214 --------NQQPNNTSASLPSPLYPWMRSQ--------FERKRGRQTYTRYQTLELEKEF 257
N N ++ S +YPWMR E KR R YTRYQTLELEKEF
Sbjct: 111 NGLSGAYKNTSNNAVNSQSDSMVYPWMRKMHMSSGANGMEAKRSRTAYTRYQTLELEKEF 170
Query: 258 HFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSKD 301
HFNRYLTRRRRIEIAHAL L+ERQIKIWFQNRRMKWKKE+ K
Sbjct: 171 HFNRYLTRRRRIEIAHALGLSERQIKIWFQNRRMKWKKEHNVKS 214
>gi|449268332|gb|EMC79201.1| Homeobox protein Hox-A5 [Columba livia]
Length = 270
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 67/104 (64%), Positives = 73/104 (70%), Gaps = 11/104 (10%)
Query: 208 PPNQPPNQQPNNTSASLPSP--LYPWMRSQF---------ERKRGRQTYTRYQTLELEKE 256
P + P + S + PS +YPWMR E KR R YTRYQTLELEKE
Sbjct: 154 PASSEQASAPTDQSTAQPSQPQIYPWMRKLHISHDNIGGPEGKRARTAYTRYQTLELEKE 213
Query: 257 FHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSK 300
FHFNRYLTRRRRIEIAHALCL+ERQIKIWFQNRRMKWKK+NK K
Sbjct: 214 FHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNKLK 257
>gi|6754232|ref|NP_034583.1| homeobox protein Hox-A5 [Mus musculus]
gi|392339939|ref|XP_003753945.1| PREDICTED: homeobox protein Hox-A5 [Rattus norvegicus]
gi|392347316|ref|XP_003749797.1| PREDICTED: homeobox protein Hox-A5 [Rattus norvegicus]
gi|392347328|ref|XP_003749803.1| PREDICTED: homeobox protein Hox-A5-like [Rattus norvegicus]
gi|392356115|ref|XP_003752228.1| PREDICTED: homeobox protein Hox-A5-like [Rattus norvegicus]
gi|123226|sp|P09021.1|HXA5_MOUSE RecName: Full=Homeobox protein Hox-A5; AltName: Full=Homeobox
protein Hox-1.3; AltName: Full=Homeobox protein M2
gi|51372|emb|CAA68364.1| homeo domain protein [Mus musculus]
gi|51471|emb|CAA34738.1| unnamed protein product [Mus musculus]
gi|193917|gb|AAA37838.1| homeobox 1.3 protein [Mus musculus]
gi|309314|gb|AAA37837.1| homeo domain protein [Mus musculus]
gi|148666242|gb|EDK98658.1| homeobox A5 [Mus musculus]
gi|149033363|gb|EDL88164.1| rCG52336 [Rattus norvegicus]
Length = 270
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/82 (75%), Positives = 65/82 (79%), Gaps = 9/82 (10%)
Query: 228 LYPWMRSQF---------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWMR E KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+
Sbjct: 176 IYPWMRKLHISHDNIGGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLS 235
Query: 279 ERQIKIWFQNRRMKWKKENKSK 300
ERQIKIWFQNRRMKWKK+NK K
Sbjct: 236 ERQIKIWFQNRRMKWKKDNKLK 257
>gi|410901647|ref|XP_003964307.1| PREDICTED: homeobox protein Hox-B5a-like [Takifugu rubripes]
gi|119370785|sp|Q1KKX9.1|HXB5A_FUGRU RecName: Full=Homeobox protein Hox-B5a
gi|94482797|gb|ABF22415.1| homeobox protein HoxB5a [Takifugu rubripes]
Length = 319
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 61/81 (75%), Positives = 65/81 (80%), Gaps = 8/81 (9%)
Query: 228 LYPWMRSQF--------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
++PWMR + KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE
Sbjct: 226 IFPWMRKLHISHDMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 285
Query: 280 RQIKIWFQNRRMKWKKENKSK 300
RQIKIWFQNRRMKWKK+NK K
Sbjct: 286 RQIKIWFQNRRMKWKKDNKLK 306
>gi|23503237|ref|NP_061825.2| homeobox protein Hox-B6 [Homo sapiens]
gi|114666344|ref|XP_001172963.1| PREDICTED: homeobox protein Hox-B6 isoform 1 [Pan troglodytes]
gi|397514558|ref|XP_003827548.1| PREDICTED: homeobox protein Hox-B6 [Pan paniscus]
gi|116242515|sp|P17509.4|HXB6_HUMAN RecName: Full=Homeobox protein Hox-B6; AltName: Full=Homeobox
protein Hox-2.2; AltName: Full=Homeobox protein Hox-2B;
AltName: Full=Homeobox protein Hu-2
gi|11138932|gb|AAG31552.1|AF287967_2 homeobox B6 [Homo sapiens]
gi|15779175|gb|AAH14651.1| Homeobox B6 [Homo sapiens]
gi|61363527|gb|AAX42406.1| homeobox B6 [synthetic construct]
gi|119615134|gb|EAW94728.1| hCG2000669, isoform CRA_a [Homo sapiens]
gi|119615135|gb|EAW94729.1| hCG2000669, isoform CRA_a [Homo sapiens]
gi|119615136|gb|EAW94730.1| hCG2000669, isoform CRA_a [Homo sapiens]
gi|119615137|gb|EAW94731.1| hCG2000669, isoform CRA_a [Homo sapiens]
gi|123979658|gb|ABM81658.1| homeobox B6 [synthetic construct]
gi|158257832|dbj|BAF84889.1| unnamed protein product [Homo sapiens]
gi|208968501|dbj|BAG74089.1| homeobox B6 [synthetic construct]
gi|312150318|gb|ADQ31671.1| homeobox B6 [synthetic construct]
gi|410208932|gb|JAA01685.1| homeobox B6 [Pan troglodytes]
gi|410250610|gb|JAA13272.1| homeobox B6 [Pan troglodytes]
gi|410287208|gb|JAA22204.1| homeobox B6 [Pan troglodytes]
gi|410331361|gb|JAA34627.1| homeobox B6 [Pan troglodytes]
Length = 224
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/82 (78%), Positives = 70/82 (85%), Gaps = 9/82 (10%)
Query: 226 SPLYPWMR-------SQF--ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALC 276
+P+YPWM+ S F +RGRQTYTRYQTLELEKEFH+NRYLTRRRRIEIAHALC
Sbjct: 125 TPVYPWMQRMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALC 184
Query: 277 LTERQIKIWFQNRRMKWKKENK 298
LTERQIKIWFQNRRMKWKKE+K
Sbjct: 185 LTERQIKIWFQNRRMKWKKESK 206
>gi|226822849|gb|ACO83084.1| homeobox A5 (predicted) [Dasypus novemcinctus]
Length = 270
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/83 (74%), Positives = 65/83 (78%), Gaps = 9/83 (10%)
Query: 228 LYPWMRSQF---------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWMR E KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+
Sbjct: 176 IYPWMRKLHISHDNIGGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLS 235
Query: 279 ERQIKIWFQNRRMKWKKENKSKD 301
ERQIKIWFQNRRMKWKK+NK K
Sbjct: 236 ERQIKIWFQNRRMKWKKDNKLKS 258
>gi|281182590|ref|NP_001162368.1| homeobox protein Hox-A5 [Papio anubis]
gi|114612539|ref|XP_519011.2| PREDICTED: homeobox protein Hox-A5 isoform 2 [Pan troglodytes]
gi|297680784|ref|XP_002818148.1| PREDICTED: homeobox protein Hox-A5 [Pongo abelii]
gi|426355744|ref|XP_004045268.1| PREDICTED: homeobox protein Hox-A5 [Gorilla gorilla gorilla]
gi|160904219|gb|ABX52203.1| homeobox A5 (predicted) [Papio anubis]
gi|410207368|gb|JAA00903.1| homeobox A5 [Pan troglodytes]
gi|410249078|gb|JAA12506.1| homeobox A5 [Pan troglodytes]
gi|410249080|gb|JAA12507.1| homeobox A5 [Pan troglodytes]
gi|410333157|gb|JAA35525.1| homeobox A5 [Pan troglodytes]
Length = 270
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/82 (75%), Positives = 65/82 (79%), Gaps = 9/82 (10%)
Query: 228 LYPWMRSQF---------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWMR E KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+
Sbjct: 176 IYPWMRKLHISHDNIGGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLS 235
Query: 279 ERQIKIWFQNRRMKWKKENKSK 300
ERQIKIWFQNRRMKWKK+NK K
Sbjct: 236 ERQIKIWFQNRRMKWKKDNKLK 257
>gi|6706217|emb|CAB65909.1| homeobox protein [Homo sapiens]
Length = 224
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/82 (78%), Positives = 70/82 (85%), Gaps = 9/82 (10%)
Query: 226 SPLYPWMR-------SQF--ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALC 276
+P+YPWM+ S F +RGRQTYTRYQTLELEKEFH+NRYLTRRRRIEIAHALC
Sbjct: 125 TPVYPWMQRMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALC 184
Query: 277 LTERQIKIWFQNRRMKWKKENK 298
LTERQIKIWFQNRRMKWKKE+K
Sbjct: 185 LTERQIKIWFQNRRMKWKKESK 206
>gi|440910523|gb|ELR60317.1| Homeobox protein Hox-B6 [Bos grunniens mutus]
Length = 224
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/82 (78%), Positives = 70/82 (85%), Gaps = 9/82 (10%)
Query: 226 SPLYPWMR-------SQF--ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALC 276
+P+YPWM+ S F +RGRQTYTRYQTLELEKEFH+NRYLTRRRRIEIAHALC
Sbjct: 125 TPVYPWMQRMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALC 184
Query: 277 LTERQIKIWFQNRRMKWKKENK 298
LTERQIKIWFQNRRMKWKKE+K
Sbjct: 185 LTERQIKIWFQNRRMKWKKESK 206
>gi|344285927|ref|XP_003414711.1| PREDICTED: homeobox protein Hox-B6-like [Loxodonta africana]
Length = 224
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/82 (78%), Positives = 70/82 (85%), Gaps = 9/82 (10%)
Query: 226 SPLYPWMR-------SQF--ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALC 276
+P+YPWM+ S F +RGRQTYTRYQTLELEKEFH+NRYLTRRRRIEIAHALC
Sbjct: 125 APVYPWMQRMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALC 184
Query: 277 LTERQIKIWFQNRRMKWKKENK 298
LTERQIKIWFQNRRMKWKKE+K
Sbjct: 185 LTERQIKIWFQNRRMKWKKESK 206
>gi|116004415|ref|NP_001070566.1| homeobox protein Hox-A5 [Bos taurus]
gi|73976525|ref|XP_539487.2| PREDICTED: homeobox protein Hox-A5 [Canis lupus familiaris]
gi|110279014|sp|Q2HJ67.1|HXA5_BOVIN RecName: Full=Homeobox protein Hox-A5
gi|87578311|gb|AAI13285.1| Homeobox A5 [Bos taurus]
gi|170649678|gb|ACB21263.1| homeobox A5 (predicted) [Callicebus moloch]
gi|296488406|tpg|DAA30519.1| TPA: homeobox protein Hox-A5 [Bos taurus]
Length = 270
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/82 (75%), Positives = 65/82 (79%), Gaps = 9/82 (10%)
Query: 228 LYPWMRSQF---------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWMR E KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+
Sbjct: 176 IYPWMRKLHISHDNIGGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLS 235
Query: 279 ERQIKIWFQNRRMKWKKENKSK 300
ERQIKIWFQNRRMKWKK+NK K
Sbjct: 236 ERQIKIWFQNRRMKWKKDNKLK 257
>gi|21886813|ref|NP_032295.1| homeobox protein Hox-B6 [Mus musculus]
gi|62656892|ref|XP_573182.1| PREDICTED: homeobox protein Hox-B6 [Rattus norvegicus]
gi|392331895|ref|XP_003752419.1| PREDICTED: homeobox protein Hox-B6 [Rattus norvegicus]
gi|123253|sp|P09023.2|HXB6_MOUSE RecName: Full=Homeobox protein Hox-B6; AltName: Full=Homeobox
protein Hox-2.2; AltName: Full=Homeobox protein MH-22A
gi|387203|gb|AAA37843.1| Hox2.2 protein, partial [Mus musculus]
gi|817962|emb|CAA39834.1| homeobox protein [Mus musculus]
gi|16877265|gb|AAH16893.1| Homeo box B6 [Mus musculus]
gi|148684079|gb|EDL16026.1| homeobox B6 [Mus musculus]
gi|149053983|gb|EDM05800.1| similar to homeotic protein Hox 2.2 - mouse (predicted) [Rattus
norvegicus]
Length = 224
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/82 (78%), Positives = 70/82 (85%), Gaps = 9/82 (10%)
Query: 226 SPLYPWMR-------SQF--ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALC 276
+P+YPWM+ S F +RGRQTYTRYQTLELEKEFH+NRYLTRRRRIEIAHALC
Sbjct: 125 TPVYPWMQRMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALC 184
Query: 277 LTERQIKIWFQNRRMKWKKENK 298
LTERQIKIWFQNRRMKWKKE+K
Sbjct: 185 LTERQIKIWFQNRRMKWKKESK 206
>gi|410262402|gb|JAA19167.1| homeobox B5 [Pan troglodytes]
Length = 269
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 65/94 (69%), Positives = 70/94 (74%), Gaps = 9/94 (9%)
Query: 228 LYPWMRSQF--------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
++PWMR + KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE
Sbjct: 176 IFPWMRKLHISHDMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 235
Query: 280 RQIKIWFQNRRMKWKKENKSKDGG-SDAGSDITP 312
RQIKIWFQNRRMKWKK+NK K + AGS P
Sbjct: 236 RQIKIWFQNRRMKWKKDNKLKSMSLATAGSAFQP 269
>gi|146324916|sp|A2D5K9.1|HXA5_LAGLA RecName: Full=Homeobox protein Hox-A5
gi|122934911|gb|ABM68201.1| HOXA5 [Lagothrix lagotricha]
gi|167427228|gb|ABZ80209.1| homeobox A5 (predicted) [Callithrix jacchus]
Length = 270
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/82 (75%), Positives = 65/82 (79%), Gaps = 9/82 (10%)
Query: 228 LYPWMRSQF---------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWMR E KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+
Sbjct: 176 IYPWMRKLHISHDNIGGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLS 235
Query: 279 ERQIKIWFQNRRMKWKKENKSK 300
ERQIKIWFQNRRMKWKK+NK K
Sbjct: 236 ERQIKIWFQNRRMKWKKDNKLK 257
>gi|395826618|ref|XP_003786514.1| PREDICTED: homeobox protein Hox-B6 [Otolemur garnettii]
Length = 224
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/82 (78%), Positives = 70/82 (85%), Gaps = 9/82 (10%)
Query: 226 SPLYPWMR-------SQF--ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALC 276
+P+YPWM+ S F +RGRQTYTRYQTLELEKEFH+NRYLTRRRRIEIAHALC
Sbjct: 125 TPVYPWMQRMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALC 184
Query: 277 LTERQIKIWFQNRRMKWKKENK 298
LTERQIKIWFQNRRMKWKKE+K
Sbjct: 185 LTERQIKIWFQNRRMKWKKESK 206
>gi|338710910|ref|XP_003362443.1| PREDICTED: homeobox protein Hox-B6-like [Equus caballus]
Length = 224
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/82 (78%), Positives = 70/82 (85%), Gaps = 9/82 (10%)
Query: 226 SPLYPWMR-------SQF--ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALC 276
+P+YPWM+ S F +RGRQTYTRYQTLELEKEFH+NRYLTRRRRIEIAHALC
Sbjct: 125 TPVYPWMQRMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALC 184
Query: 277 LTERQIKIWFQNRRMKWKKENK 298
LTERQIKIWFQNRRMKWKKE+K
Sbjct: 185 LTERQIKIWFQNRRMKWKKESK 206
>gi|431909014|gb|ELK12605.1| Homeobox protein Hox-A5 [Pteropus alecto]
Length = 231
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/83 (74%), Positives = 65/83 (78%), Gaps = 9/83 (10%)
Query: 228 LYPWMRSQF---------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWMR E KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+
Sbjct: 137 IYPWMRKLHISHDNIGGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLS 196
Query: 279 ERQIKIWFQNRRMKWKKENKSKD 301
ERQIKIWFQNRRMKWKK+NK K
Sbjct: 197 ERQIKIWFQNRRMKWKKDNKLKS 219
>gi|120974241|gb|ABM46661.1| HOXA5 [Gorilla gorilla]
Length = 216
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/83 (74%), Positives = 65/83 (78%), Gaps = 9/83 (10%)
Query: 228 LYPWMRSQF---------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWMR E KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+
Sbjct: 122 IYPWMRKLHISHDNIGGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLS 181
Query: 279 ERQIKIWFQNRRMKWKKENKSKD 301
ERQIKIWFQNRRMKWKK+NK K
Sbjct: 182 ERQIKIWFQNRRMKWKKDNKLKS 204
>gi|345805496|ref|XP_003435306.1| PREDICTED: homeobox protein Hox-B6 [Canis lupus familiaris]
gi|281344382|gb|EFB19966.1| hypothetical protein PANDA_005013 [Ailuropoda melanoleuca]
Length = 224
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/82 (78%), Positives = 70/82 (85%), Gaps = 9/82 (10%)
Query: 226 SPLYPWMR-------SQF--ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALC 276
+P+YPWM+ S F +RGRQTYTRYQTLELEKEFH+NRYLTRRRRIEIAHALC
Sbjct: 125 TPVYPWMQRMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALC 184
Query: 277 LTERQIKIWFQNRRMKWKKENK 298
LTERQIKIWFQNRRMKWKKE+K
Sbjct: 185 LTERQIKIWFQNRRMKWKKESK 206
>gi|344252753|gb|EGW08857.1| Homeobox protein Hox-A7 [Cricetulus griseus]
Length = 112
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/80 (80%), Positives = 68/80 (85%), Gaps = 1/80 (1%)
Query: 237 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
+RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE
Sbjct: 10 DRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 69
Query: 297 NKSKDGGSDAG-SDITPATS 315
+K + A D P+ S
Sbjct: 70 HKDESQAPTAAPEDAVPSVS 89
>gi|335297812|ref|XP_003358123.1| PREDICTED: homeobox protein Hox-B6-like [Sus scrofa]
Length = 224
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/82 (78%), Positives = 70/82 (85%), Gaps = 9/82 (10%)
Query: 226 SPLYPWMR-------SQF--ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALC 276
+P+YPWM+ S F +RGRQTYTRYQTLELEKEFH+NRYLTRRRRIEIAHALC
Sbjct: 125 TPVYPWMQRMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALC 184
Query: 277 LTERQIKIWFQNRRMKWKKENK 298
LTERQIKIWFQNRRMKWKKE+K
Sbjct: 185 LTERQIKIWFQNRRMKWKKESK 206
>gi|291405869|ref|XP_002719359.1| PREDICTED: homeobox B6 [Oryctolagus cuniculus]
Length = 224
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/82 (78%), Positives = 70/82 (85%), Gaps = 9/82 (10%)
Query: 226 SPLYPWMR-------SQF--ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALC 276
+P+YPWM+ S F +RGRQTYTRYQTLELEKEFH+NRYLTRRRRIEIAHALC
Sbjct: 125 TPVYPWMQRMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALC 184
Query: 277 LTERQIKIWFQNRRMKWKKENK 298
LTERQIKIWFQNRRMKWKKE+K
Sbjct: 185 LTERQIKIWFQNRRMKWKKESK 206
>gi|426347606|ref|XP_004041440.1| PREDICTED: homeobox protein Hox-B6 [Gorilla gorilla gorilla]
Length = 224
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/82 (78%), Positives = 70/82 (85%), Gaps = 9/82 (10%)
Query: 226 SPLYPWMR-------SQF--ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALC 276
+P+YPWM+ S F +RGRQTYTRYQTLELEKEFH+NRYLTRRRRIEIAHALC
Sbjct: 125 TPVYPWMQRMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALC 184
Query: 277 LTERQIKIWFQNRRMKWKKENK 298
LTERQIKIWFQNRRMKWKKE+K
Sbjct: 185 LTERQIKIWFQNRRMKWKKESK 206
>gi|348564420|ref|XP_003468003.1| PREDICTED: homeobox protein Hox-A5-like [Cavia porcellus]
Length = 270
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/82 (75%), Positives = 65/82 (79%), Gaps = 9/82 (10%)
Query: 228 LYPWMRSQF---------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWMR E KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+
Sbjct: 176 IYPWMRKLHISHDNIGGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLS 235
Query: 279 ERQIKIWFQNRRMKWKKENKSK 300
ERQIKIWFQNRRMKWKK+NK K
Sbjct: 236 ERQIKIWFQNRRMKWKKDNKLK 257
>gi|301762936|ref|XP_002916894.1| PREDICTED: hypothetical protein LOC100482582 [Ailuropoda
melanoleuca]
Length = 805
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/82 (78%), Positives = 70/82 (85%), Gaps = 9/82 (10%)
Query: 226 SPLYPWMR-------SQF--ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALC 276
+P+YPWM+ S F +RGRQTYTRYQTLELEKEFH+NRYLTRRRRIEIAHALC
Sbjct: 706 TPVYPWMQRMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALC 765
Query: 277 LTERQIKIWFQNRRMKWKKENK 298
LTERQIKIWFQNRRMKWKKE+K
Sbjct: 766 LTERQIKIWFQNRRMKWKKESK 787
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 58/74 (78%), Positives = 66/74 (89%), Gaps = 1/74 (1%)
Query: 225 PSPLYPWMRSQFE-RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIK 283
P+ L+PWMR Q R+RGRQTY+RYQTLELEKEF FN YLTR+RRIE++HAL LTERQ+K
Sbjct: 378 PTQLFPWMRPQAAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVK 437
Query: 284 IWFQNRRMKWKKEN 297
IWFQNRRMKWKKEN
Sbjct: 438 IWFQNRRMKWKKEN 451
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 53/68 (77%), Gaps = 1/68 (1%)
Query: 231 WMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRR 290
W+ ++ RK+ R YT+YQTLELEKEF FN YLTR RR E+A L L+ERQ+KIWFQNRR
Sbjct: 176 WLHARSSRKK-RCPYTKYQTLELEKEFLFNMYLTRDRRHEVARLLNLSERQVKIWFQNRR 234
Query: 291 MKWKKENK 298
MK KK NK
Sbjct: 235 MKMKKMNK 242
>gi|297715935|ref|XP_002834297.1| PREDICTED: homeobox protein Hox-B6 [Pongo abelii]
Length = 224
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/82 (78%), Positives = 70/82 (85%), Gaps = 9/82 (10%)
Query: 226 SPLYPWMR-------SQF--ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALC 276
+P+YPWM+ S F +RGRQTYTRYQTLELEKEFH+NRYLTRRRRIEIAHALC
Sbjct: 125 TPVYPWMQRMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALC 184
Query: 277 LTERQIKIWFQNRRMKWKKENK 298
LTERQIKIWFQNRRMKWKKE+K
Sbjct: 185 LTERQIKIWFQNRRMKWKKESK 206
>gi|22477523|gb|AAH36986.1| Hoxa7 protein [Mus musculus]
gi|148666244|gb|EDK98660.1| homeobox A7, isoform CRA_a [Mus musculus]
Length = 108
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/80 (80%), Positives = 68/80 (85%), Gaps = 1/80 (1%)
Query: 237 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
+RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE
Sbjct: 7 DRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 66
Query: 297 NKSKDGGSDAG-SDITPATS 315
+K + A D P+ S
Sbjct: 67 HKDESQAPTAAPEDAVPSVS 86
>gi|15029697|gb|AAH11063.1| Homeo box A5 [Mus musculus]
Length = 270
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/82 (75%), Positives = 65/82 (79%), Gaps = 9/82 (10%)
Query: 228 LYPWMRSQF---------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWMR E KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+
Sbjct: 176 IYPWMRKLHISHDNIGGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLS 235
Query: 279 ERQIKIWFQNRRMKWKKENKSK 300
ERQIKIWFQNRRMKWKK+NK K
Sbjct: 236 ERQIKIWFQNRRMKWKKDNKLK 257
>gi|403287991|ref|XP_003935201.1| PREDICTED: homeobox protein Hox-A5 [Saimiri boliviensis
boliviensis]
Length = 270
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/82 (75%), Positives = 65/82 (79%), Gaps = 9/82 (10%)
Query: 228 LYPWMRSQF---------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWMR E KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+
Sbjct: 176 IYPWMRKLHISHDNIGGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLS 235
Query: 279 ERQIKIWFQNRRMKWKKENKSK 300
ERQIKIWFQNRRMKWKK+NK K
Sbjct: 236 ERQIKIWFQNRRMKWKKDNKLK 257
>gi|74188415|dbj|BAE25847.1| unnamed protein product [Mus musculus]
Length = 262
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/82 (75%), Positives = 65/82 (79%), Gaps = 9/82 (10%)
Query: 228 LYPWMRSQF---------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWMR E KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+
Sbjct: 168 IYPWMRKLHISHDNIGGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLS 227
Query: 279 ERQIKIWFQNRRMKWKKENKSK 300
ERQIKIWFQNRRMKWKK+NK K
Sbjct: 228 ERQIKIWFQNRRMKWKKDNKLK 249
>gi|296202581|ref|XP_002748516.1| PREDICTED: homeobox protein Hox-B6 [Callithrix jacchus]
gi|403279477|ref|XP_003931276.1| PREDICTED: homeobox protein Hox-B6 [Saimiri boliviensis
boliviensis]
Length = 224
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/82 (78%), Positives = 70/82 (85%), Gaps = 9/82 (10%)
Query: 226 SPLYPWMR-------SQF--ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALC 276
+P+YPWM+ S F +RGRQTYTRYQTLELEKEFH+NRYLTRRRRIEIAHALC
Sbjct: 125 TPVYPWMQRMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALC 184
Query: 277 LTERQIKIWFQNRRMKWKKENK 298
LTERQIKIWFQNRRMKWKKE+K
Sbjct: 185 LTERQIKIWFQNRRMKWKKESK 206
>gi|431890743|gb|ELK01622.1| Homeobox protein Hox-B6 [Pteropus alecto]
Length = 224
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/82 (78%), Positives = 70/82 (85%), Gaps = 9/82 (10%)
Query: 226 SPLYPWMR-------SQF--ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALC 276
+P+YPWM+ S F +RGRQTYTRYQTLELEKEFH+NRYLTRRRRIEIAHALC
Sbjct: 125 TPVYPWMQRMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALC 184
Query: 277 LTERQIKIWFQNRRMKWKKENK 298
LTERQIKIWFQNRRMKWKKE+K
Sbjct: 185 LTERQIKIWFQNRRMKWKKESK 206
>gi|410980869|ref|XP_003996796.1| PREDICTED: homeobox protein Hox-B6 [Felis catus]
Length = 224
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/82 (78%), Positives = 70/82 (85%), Gaps = 9/82 (10%)
Query: 226 SPLYPWMR-------SQF--ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALC 276
+P+YPWM+ S F +RGRQTYTRYQTLELEKEFH+NRYLTRRRRIEIAHALC
Sbjct: 125 TPVYPWMQRMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALC 184
Query: 277 LTERQIKIWFQNRRMKWKKENK 298
LTERQIKIWFQNRRMKWKKE+K
Sbjct: 185 LTERQIKIWFQNRRMKWKKESK 206
>gi|284005067|ref|NP_001164872.1| homeobox protein Hox-A6 [Oryctolagus cuniculus]
gi|217418308|gb|ACK44310.1| homeobox A6 (predicted) [Oryctolagus cuniculus]
Length = 227
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/89 (71%), Positives = 68/89 (76%), Gaps = 6/89 (6%)
Query: 219 NTSASLPSPLYPWMRSQF------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIA 272
T SP+YPWM+ E KR R YTRYQTLELEKEFHFNRYLTRRRRIEIA
Sbjct: 127 GTDRKYTSPVYPWMQRMNSCAGGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIA 186
Query: 273 HALCLTERQIKIWFQNRRMKWKKENKSKD 301
HALCL+ERQIKIWFQNRRMKWKK+NK K
Sbjct: 187 HALCLSERQIKIWFQNRRMKWKKDNKLKS 215
>gi|32370|emb|CAA41335.1| HOX 2.2 [Homo sapiens]
Length = 224
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/82 (78%), Positives = 70/82 (85%), Gaps = 9/82 (10%)
Query: 226 SPLYPWMR-------SQF--ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALC 276
+P+YPWM+ S F +RGRQTYTRYQTLELEKEFH+NRYLTRRRRIEIAHALC
Sbjct: 125 TPVYPWMQRMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALC 184
Query: 277 LTERQIKIWFQNRRMKWKKENK 298
LTERQIKIWFQNRRMKWKKE+K
Sbjct: 185 LTERQIKIWFQNRRMKWKKESK 206
>gi|426238970|ref|XP_004013409.1| PREDICTED: homeobox protein Hox-B6 [Ovis aries]
Length = 247
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/82 (78%), Positives = 70/82 (85%), Gaps = 9/82 (10%)
Query: 226 SPLYPWMR-------SQF--ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALC 276
+P+YPWM+ S F +RGRQTYTRYQTLELEKEFH+NRYLTRRRRIEIAHALC
Sbjct: 148 TPVYPWMQRMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALC 207
Query: 277 LTERQIKIWFQNRRMKWKKENK 298
LTERQIKIWFQNRRMKWKKE+K
Sbjct: 208 LTERQIKIWFQNRRMKWKKESK 229
>gi|224460203|gb|ACN43631.1| sex combs reduced [Rhodnius prolixus]
Length = 338
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 65/89 (73%), Positives = 69/89 (77%), Gaps = 10/89 (11%)
Query: 220 TSASLPSPLYPWMR----------SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRI 269
T A P +YPWM+ + E KR R +YTRYQTLELEKEFHFNRYLTRRRRI
Sbjct: 222 TPAGNPPQIYPWMKRVHLGQSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRI 281
Query: 270 EIAHALCLTERQIKIWFQNRRMKWKKENK 298
EIAHALCLTERQIKIWFQNRRMKWKKENK
Sbjct: 282 EIAHALCLTERQIKIWFQNRRMKWKKENK 310
>gi|31205335|ref|XP_311616.1| AGAP004659-PA [Anopheles gambiae str. PEST]
gi|3420834|gb|AAC31944.1| Sex combs reduced homeotic protein [Anopheles gambiae]
gi|30177656|gb|EAA07257.2| AGAP004659-PA [Anopheles gambiae str. PEST]
Length = 372
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 61/81 (75%), Positives = 66/81 (81%), Gaps = 10/81 (12%)
Query: 228 LYPWMR----------SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 277
+YPWM+ + E KR R +YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL
Sbjct: 260 IYPWMKRVHIGQSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 319
Query: 278 TERQIKIWFQNRRMKWKKENK 298
TERQIKIWFQNRRMKWKKE+K
Sbjct: 320 TERQIKIWFQNRRMKWKKEHK 340
>gi|14010247|gb|AAK51916.1|AF361332_1 antennapedia [Folsomia candida]
Length = 70
Score = 135 bits (340), Expect = 3e-29, Method: Composition-based stats.
Identities = 63/63 (100%), Positives = 63/63 (100%)
Query: 238 RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 297
RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN
Sbjct: 1 RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 60
Query: 298 KSK 300
KSK
Sbjct: 61 KSK 63
>gi|213514608|ref|NP_001133034.1| homeobox protein HoxA5aa [Salmo salar]
gi|157816043|gb|ABV82040.1| homeobox protein HoxA5aa [Salmo salar]
Length = 282
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 64/92 (69%), Positives = 67/92 (72%), Gaps = 9/92 (9%)
Query: 228 LYPWMRSQF---------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWMR E KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+
Sbjct: 186 IYPWMRKLHINHDSLTGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLS 245
Query: 279 ERQIKIWFQNRRMKWKKENKSKDGGSDAGSDI 310
ERQIKIWFQNRRMKWKK+NK K A I
Sbjct: 246 ERQIKIWFQNRRMKWKKDNKLKSMSMAAAGAI 277
>gi|70778859|ref|NP_001020526.1| homeobox protein Hox-B5 [Gallus gallus]
gi|326934077|ref|XP_003213122.1| PREDICTED: homeobox protein Hox-B5a-like [Meleagris gallopavo]
gi|57235483|gb|AAW48484.1| homeodomain transcription factor [Gallus gallus]
Length = 264
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 64/94 (68%), Positives = 70/94 (74%), Gaps = 9/94 (9%)
Query: 228 LYPWMRSQF--------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
++PWMR + KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+E
Sbjct: 171 IFPWMRKLHISHDMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSE 230
Query: 280 RQIKIWFQNRRMKWKKENKSKDGG-SDAGSDITP 312
RQIKIWFQNRRMKWKK+NK K + AGS P
Sbjct: 231 RQIKIWFQNRRMKWKKDNKLKSMSLASAGSAFQP 264
>gi|47216999|emb|CAG01627.1| unnamed protein product [Tetraodon nigroviridis]
Length = 317
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 61/81 (75%), Positives = 65/81 (80%), Gaps = 8/81 (9%)
Query: 228 LYPWMRSQF--------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
++PWMR + KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE
Sbjct: 224 IFPWMRKLHISHDMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 283
Query: 280 RQIKIWFQNRRMKWKKENKSK 300
RQIKIWFQNRRMKWKK+NK K
Sbjct: 284 RQIKIWFQNRRMKWKKDNKLK 304
>gi|359754086|gb|AEV59509.1| HOXA5, partial [Macropus eugenii]
Length = 265
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 62/82 (75%), Positives = 65/82 (79%), Gaps = 9/82 (10%)
Query: 228 LYPWMRSQF---------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWMR E KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+
Sbjct: 175 IYPWMRKLHISHDNIGGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLS 234
Query: 279 ERQIKIWFQNRRMKWKKENKSK 300
ERQIKIWFQNRRMKWKK+NK K
Sbjct: 235 ERQIKIWFQNRRMKWKKDNKLK 256
>gi|345323595|ref|XP_003430728.1| PREDICTED: homeobox protein Hox-A5-like [Ornithorhynchus anatinus]
Length = 269
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 62/83 (74%), Positives = 65/83 (78%), Gaps = 9/83 (10%)
Query: 228 LYPWMRSQF---------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWMR E KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+
Sbjct: 175 IYPWMRKLHISHDNIGGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLS 234
Query: 279 ERQIKIWFQNRRMKWKKENKSKD 301
ERQIKIWFQNRRMKWKK+NK K
Sbjct: 235 ERQIKIWFQNRRMKWKKDNKLKS 257
>gi|301128901|emb|CBL59363.1| HoxD5 [Scyliorhinus canicula]
Length = 252
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 62/82 (75%), Positives = 66/82 (80%), Gaps = 9/82 (10%)
Query: 228 LYPWMR---------SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWM+ S E KR R YTRYQTLELEKEFH+NRYLTRRRRIEIAHALCLT
Sbjct: 158 IYPWMKKMHLNQEGLSGLEGKRTRTAYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLT 217
Query: 279 ERQIKIWFQNRRMKWKKENKSK 300
ERQIKIWFQNRRMKWKK+NK K
Sbjct: 218 ERQIKIWFQNRRMKWKKDNKLK 239
>gi|225581119|gb|ACN94690.1| GA10228 [Drosophila miranda]
Length = 345
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 65/103 (63%), Positives = 73/103 (70%), Gaps = 10/103 (9%)
Query: 206 SQPPNQPPNQQPNNTSASLPSPLYPWMR----------SQFERKRGRQTYTRYQTLELEK 255
S N+ + Q + P +YPWM+ + E KR R +YTRYQTLELEK
Sbjct: 210 SDSGNEAGSSQNSGNGKKNPPQIYPWMKRVHLGQSTVNANGETKRQRTSYTRYQTLELEK 269
Query: 256 EFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
EFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE+K
Sbjct: 270 EFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHK 312
>gi|147900209|ref|NP_001081015.1| homeobox protein Hox-C6 [Xenopus laevis]
gi|123243|sp|P02832.2|HXC6_XENLA RecName: Full=Homeobox protein Hox-C6; AltName: Full=AC1; AltName:
Full=XlHbox-1
gi|64744|emb|CAA31021.1| unnamed protein product [Xenopus laevis]
gi|54038055|gb|AAH84319.1| XlHbox1 protein [Xenopus laevis]
Length = 234
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 63/94 (67%), Positives = 72/94 (76%), Gaps = 12/94 (12%)
Query: 228 LYPWMRSQ---------FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWM+ +R+RGRQ Y+RYQTLELEKEFHFNRYLTRRRRIEIA+ALCLT
Sbjct: 122 IYPWMQRMNSHSGVGYGTDRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLT 181
Query: 279 ERQIKIWFQNRRMKWKKENKSKD---GGSDAGSD 309
ERQIKIWFQNRRMKWKKE+ GG+ A +D
Sbjct: 182 ERQIKIWFQNRRMKWKKESNLSSTLPGGTGAAAD 215
>gi|74267563|dbj|BAE44280.1| hoxC6a [Oryzias latipes]
gi|83016965|dbj|BAE53488.1| hoxC6a [Oryzias latipes]
Length = 233
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 65/96 (67%), Positives = 74/96 (77%), Gaps = 10/96 (10%)
Query: 227 PLYPWMRSQ--------FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
P+YPWM+ +R+RGRQ Y+RYQTLELEKEFHFNRYLTRRRRIEIA+ALCLT
Sbjct: 120 PIYPWMQRMNSHSVGYGTDRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLT 179
Query: 279 ERQIKIWFQNRRMKWKKENKSKDGGSDAGSDITPAT 314
ERQIKIWFQNRRMKWKKE S + GS+ T A+
Sbjct: 180 ERQIKIWFQNRRMKWKKE--SNLTSTVTGSEQTGAS 213
>gi|213515508|ref|NP_001133039.1| homeobox protein HoxA7ab [Salmo salar]
gi|157816061|gb|ABV82049.1| homeobox protein HoxA7ab [Salmo salar]
Length = 252
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 60/72 (83%), Positives = 66/72 (91%), Gaps = 1/72 (1%)
Query: 228 LYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWMR+ RKRGRQTY+RYQTLELEKEFHFNRYL RRRR+EIAH LCLTERQIKIWF
Sbjct: 115 MYPWMRTSDPNRKRGRQTYSRYQTLELEKEFHFNRYLNRRRRVEIAHVLCLTERQIKIWF 174
Query: 287 QNRRMKWKKENK 298
QNRRMKWKK++K
Sbjct: 175 QNRRMKWKKDHK 186
>gi|220898193|gb|ACL81448.1| HoxB5 [Latimeria menadoensis]
Length = 264
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 64/94 (68%), Positives = 70/94 (74%), Gaps = 9/94 (9%)
Query: 228 LYPWMRSQF--------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
++PWMR + KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+E
Sbjct: 171 IFPWMRKLHISHDMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSE 230
Query: 280 RQIKIWFQNRRMKWKKENKSKDGG-SDAGSDITP 312
RQIKIWFQNRRMKWKK+NK K + AGS P
Sbjct: 231 RQIKIWFQNRRMKWKKDNKLKSMSLASAGSAFQP 264
>gi|390178649|ref|XP_001359213.3| Scr [Drosophila pseudoobscura pseudoobscura]
gi|388859531|gb|EAL28358.3| Scr [Drosophila pseudoobscura pseudoobscura]
Length = 426
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 65/103 (63%), Positives = 73/103 (70%), Gaps = 10/103 (9%)
Query: 206 SQPPNQPPNQQPNNTSASLPSPLYPWMR----------SQFERKRGRQTYTRYQTLELEK 255
S N+ + Q + P +YPWM+ + E KR R +YTRYQTLELEK
Sbjct: 291 SDSGNEAGSSQNSGNGKKNPPQIYPWMKRVHLGQSTVNANGETKRQRTSYTRYQTLELEK 350
Query: 256 EFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
EFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE+K
Sbjct: 351 EFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHK 393
>gi|400180338|gb|AFP73305.1| Hoxa6beta [Polyodon spathula]
Length = 229
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 63/81 (77%), Positives = 67/81 (82%), Gaps = 7/81 (8%)
Query: 225 PSPLYPWMRSQFER-------KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 277
P +YPWM + KRGRQTYTR+QTLELEKEFHFNRYLTRRRRIEIA+ALCL
Sbjct: 131 PGSVYPWMMNSCNGSNYGSHGKRGRQTYTRFQTLELEKEFHFNRYLTRRRRIEIANALCL 190
Query: 278 TERQIKIWFQNRRMKWKKENK 298
TERQIKIWFQNRRMKWKKENK
Sbjct: 191 TERQIKIWFQNRRMKWKKENK 211
>gi|126341819|ref|XP_001362736.1| PREDICTED: homeobox protein Hox-A5-like [Monodelphis domestica]
Length = 269
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 62/82 (75%), Positives = 65/82 (79%), Gaps = 9/82 (10%)
Query: 228 LYPWMRSQF---------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWMR E KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+
Sbjct: 175 IYPWMRKLHISHDNIGGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLS 234
Query: 279 ERQIKIWFQNRRMKWKKENKSK 300
ERQIKIWFQNRRMKWKK+NK K
Sbjct: 235 ERQIKIWFQNRRMKWKKDNKLK 256
>gi|58332666|ref|NP_001011405.1| homeobox A5 [Xenopus (Silurana) tropicalis]
gi|56789615|gb|AAH88772.1| homeobox A5 [Xenopus (Silurana) tropicalis]
Length = 274
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 62/82 (75%), Positives = 65/82 (79%), Gaps = 9/82 (10%)
Query: 228 LYPWMRSQF---------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWMR E KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+
Sbjct: 180 IYPWMRKLHISHDNIGGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLS 239
Query: 279 ERQIKIWFQNRRMKWKKENKSK 300
ERQIKIWFQNRRMKWKK+NK K
Sbjct: 240 ERQIKIWFQNRRMKWKKDNKLK 261
>gi|224086902|ref|XP_002187008.1| PREDICTED: homeobox protein Hox-B5a-like [Taeniopygia guttata]
Length = 265
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 64/94 (68%), Positives = 70/94 (74%), Gaps = 9/94 (9%)
Query: 228 LYPWMRSQF--------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
++PWMR + KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+E
Sbjct: 172 IFPWMRKLHISHDMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSE 231
Query: 280 RQIKIWFQNRRMKWKKENKSKDGG-SDAGSDITP 312
RQIKIWFQNRRMKWKK+NK K + AGS P
Sbjct: 232 RQIKIWFQNRRMKWKKDNKLKSMSLASAGSAFQP 265
>gi|395540362|ref|XP_003772124.1| PREDICTED: homeobox protein Hox-A5 [Sarcophilus harrisii]
Length = 269
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 62/83 (74%), Positives = 65/83 (78%), Gaps = 9/83 (10%)
Query: 228 LYPWMRSQF---------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWMR E KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+
Sbjct: 175 IYPWMRKLHISHDNIGGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLS 234
Query: 279 ERQIKIWFQNRRMKWKKENKSKD 301
ERQIKIWFQNRRMKWKK+NK K
Sbjct: 235 ERQIKIWFQNRRMKWKKDNKLKS 257
>gi|123242|sp|P14858.1|HXC6_NOTVI RecName: Full=Homeobox protein Hox-C6; AltName: Full=FH-2; AltName:
Full=NvHox-1
gi|64118|emb|CAA32139.1| unnamed protein product [Notophthalmus viridescens]
Length = 234
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 63/94 (67%), Positives = 72/94 (76%), Gaps = 12/94 (12%)
Query: 228 LYPWMRSQ---------FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWM+ +R+RGRQ Y+RYQTLELEKEFHFNRYLTRRRRIEIA+A CLT
Sbjct: 122 IYPWMQRMNSHSGVGYGTDRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANASCLT 181
Query: 279 ERQIKIWFQNRRMKWKKEN---KSKDGGSDAGSD 309
ERQIKIWFQNRRMKWKKE+ + GG+ A SD
Sbjct: 182 ERQIKIWFQNRRMKWKKESNLTSTLSGGTGAASD 215
>gi|255742476|gb|ACU32588.1| homeobox protein HoxD5 [Callorhinchus milii]
Length = 249
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 71/124 (57%), Positives = 79/124 (63%), Gaps = 21/124 (16%)
Query: 199 TPPNQPPSQPPNQPPNQQPNNTSASLP------------SPLYPWMRSQ---------FE 237
T P SQ P+ ++ P TS+ P + +YPWMR E
Sbjct: 114 TEPRHSCSQDPSPVTDKHPEETSSPKPETGQLAQDQAHQTQIYPWMRKLHLNQEGLGGTE 173
Query: 238 RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 297
KR R YTRYQTLELEKEFH+NRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKK+N
Sbjct: 174 GKRTRTAYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKDN 233
Query: 298 KSKD 301
K K
Sbjct: 234 KLKS 237
>gi|195446501|ref|XP_002070807.1| GK10826 [Drosophila willistoni]
gi|194166892|gb|EDW81793.1| GK10826 [Drosophila willistoni]
Length = 428
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 65/103 (63%), Positives = 73/103 (70%), Gaps = 10/103 (9%)
Query: 206 SQPPNQPPNQQPNNTSASLPSPLYPWMR----------SQFERKRGRQTYTRYQTLELEK 255
S N+ + Q + P +YPWM+ + E KR R +YTRYQTLELEK
Sbjct: 278 SDSGNEAGSSQNSGNGKKNPPQIYPWMKRVHLGQSTVNANGETKRQRTSYTRYQTLELEK 337
Query: 256 EFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
EFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE+K
Sbjct: 338 EFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHK 380
>gi|195038415|ref|XP_001990655.1| GH19477 [Drosophila grimshawi]
gi|193894851|gb|EDV93717.1| GH19477 [Drosophila grimshawi]
Length = 576
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 65/103 (63%), Positives = 73/103 (70%), Gaps = 10/103 (9%)
Query: 206 SQPPNQPPNQQPNNTSASLPSPLYPWMR----------SQFERKRGRQTYTRYQTLELEK 255
S N+ + Q + P +YPWM+ + E KR R +YTRYQTLELEK
Sbjct: 291 SDSGNEAGSSQNSGNGKKNPPQIYPWMKRVHLGQSTVNANGETKRQRTSYTRYQTLELEK 350
Query: 256 EFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
EFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE+K
Sbjct: 351 EFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHK 393
>gi|34484444|gb|AAQ72844.1| HoxB6b [Sphoeroides nephelus]
Length = 233
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 63/80 (78%), Positives = 67/80 (83%), Gaps = 9/80 (11%)
Query: 228 LYPWMRSQ-------F--ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWM+ F +RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEI+HALCLT
Sbjct: 136 IYPWMQRMNACSAGPFGNSGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEISHALCLT 195
Query: 279 ERQIKIWFQNRRMKWKKENK 298
ERQIKIWFQNRRMKWKKENK
Sbjct: 196 ERQIKIWFQNRRMKWKKENK 215
>gi|432925212|ref|XP_004080699.1| PREDICTED: homeobox protein Hox-B6b-like [Oryzias latipes]
Length = 235
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 62/80 (77%), Positives = 66/80 (82%), Gaps = 9/80 (11%)
Query: 228 LYPWMRSQ---------FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWM+ +RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEI+HALCLT
Sbjct: 138 IYPWMQRMNACSAGPFGTSGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEISHALCLT 197
Query: 279 ERQIKIWFQNRRMKWKKENK 298
ERQIKIWFQNRRMKWKKENK
Sbjct: 198 ERQIKIWFQNRRMKWKKENK 217
>gi|431890742|gb|ELK01621.1| Homeobox protein Hox-B5 [Pteropus alecto]
Length = 269
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 68/110 (61%), Positives = 76/110 (69%), Gaps = 13/110 (11%)
Query: 216 QPNNTSASLPSP----LYPWMRSQF--------ERKRGRQTYTRYQTLELEKEFHFNRYL 263
+P TS + P ++PWMR + KR R YTRYQTLELEKEFHFNRYL
Sbjct: 160 EPMTTSTAAPEGQTPQIFPWMRKLHISHDMTGPDGKRARTAYTRYQTLELEKEFHFNRYL 219
Query: 264 TRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSKDGG-SDAGSDITP 312
TRRRRIEIAHALCL+ERQIKIWFQNRRMKWKK+NK K + AGS P
Sbjct: 220 TRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNKLKSMSLATAGSAFQP 269
>gi|351713532|gb|EHB16451.1| Homeobox protein Hox-B6 [Heterocephalus glaber]
Length = 224
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 64/82 (78%), Positives = 70/82 (85%), Gaps = 9/82 (10%)
Query: 226 SPLYPWMR-------SQF--ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALC 276
+P+YPWM+ S F +RGRQTYTRYQTLELEKEFH+NRYLTRRRRIEIAHALC
Sbjct: 125 TPVYPWMQRMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALC 184
Query: 277 LTERQIKIWFQNRRMKWKKENK 298
LTERQIKIWFQNRRMKWKKE+K
Sbjct: 185 LTERQIKIWFQNRRMKWKKESK 206
>gi|348522363|ref|XP_003448694.1| PREDICTED: homeobox protein Hox-B6b-like [Oreochromis niloticus]
gi|154183845|gb|ABS70784.1| Hoxb6b [Haplochromis burtoni]
Length = 235
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 62/80 (77%), Positives = 66/80 (82%), Gaps = 9/80 (11%)
Query: 228 LYPWMRSQ---------FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWM+ +RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEI+HALCLT
Sbjct: 138 IYPWMQRMNACSAGPFGSSGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEISHALCLT 197
Query: 279 ERQIKIWFQNRRMKWKKENK 298
ERQIKIWFQNRRMKWKKENK
Sbjct: 198 ERQIKIWFQNRRMKWKKENK 217
>gi|158702311|gb|ABW77507.1| homeobox protein HoxB5bb [Salmo salar]
Length = 279
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 67/102 (65%), Positives = 74/102 (72%), Gaps = 12/102 (11%)
Query: 211 QPPNQQPNNTSAS---LPSP-LYPWMRSQF--------ERKRGRQTYTRYQTLELEKEFH 258
Q P Q+ N TS + +P ++PWMR + KR R YTRYQTLELEKEFH
Sbjct: 165 QQPQQESNATSTTSNDCQTPQIFPWMRKLHINHEMAGPDGKRARTAYTRYQTLELEKEFH 224
Query: 259 FNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSK 300
FNRYLTRRRRIEIAH LCLTERQIKIWFQNRRMKWKK+NK K
Sbjct: 225 FNRYLTRRRRIEIAHTLCLTERQIKIWFQNRRMKWKKDNKLK 266
>gi|410895279|ref|XP_003961127.1| PREDICTED: homeobox protein Hox-B6b-like [Takifugu rubripes]
gi|119370788|sp|Q1KKX1.1|HXB6B_FUGRU RecName: Full=Homeobox protein Hox-B6b
gi|94482806|gb|ABF22423.1| homeobox protein HoxB6b [Takifugu rubripes]
Length = 233
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 63/80 (78%), Positives = 67/80 (83%), Gaps = 9/80 (11%)
Query: 228 LYPWMRSQ-------F--ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWM+ F +RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEI+HALCLT
Sbjct: 136 IYPWMQRMNACSAGPFGNSGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEISHALCLT 195
Query: 279 ERQIKIWFQNRRMKWKKENK 298
ERQIKIWFQNRRMKWKKENK
Sbjct: 196 ERQIKIWFQNRRMKWKKENK 215
>gi|213513255|ref|NP_001133000.1| homeobox protein HoxC6aa [Salmo salar]
gi|157815942|gb|ABV81990.1| homeobox protein HoxC6aa [Salmo salar]
gi|158702328|gb|ABW77519.1| homeobox protein HoxC6aa [Salmo salar]
Length = 231
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 65/96 (67%), Positives = 73/96 (76%), Gaps = 11/96 (11%)
Query: 228 LYPWMRSQ---------FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWM+ +R+RGRQ Y+RYQTLELEKEFHFNRYLTRRRRIEIA+ALCLT
Sbjct: 125 IYPWMQRMNSHSGVGYGSDRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLT 184
Query: 279 ERQIKIWFQNRRMKWKKENKSKDGGSDAGSDITPAT 314
ERQIKIWFQNRRMKWKKE S + GS+ T AT
Sbjct: 185 ERQIKIWFQNRRMKWKKE--SNLTSTVTGSESTGAT 218
>gi|348562609|ref|XP_003467102.1| PREDICTED: homeobox protein Hox-B7-like [Cavia porcellus]
Length = 127
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 69/107 (64%), Positives = 78/107 (72%), Gaps = 7/107 (6%)
Query: 200 PPNQPPSQPPNQPPNQQPNNTSAS-----LPSPLYPW--MRSQFERKRGRQTYTRYQTLE 252
P + P+ PP P +T L L P+ + + +RKRGRQTYTRYQTLE
Sbjct: 2 PAEESPASPPASRPALGFTSTVGRQGLEVLTDQLPPFHILGAGTDRKRGRQTYTRYQTLE 61
Query: 253 LEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKS 299
LEKEFH+NRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK+
Sbjct: 62 LEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKT 108
>gi|359754098|gb|AEV59520.1| HOXB5 [Macropus eugenii]
Length = 267
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 69/120 (57%), Positives = 77/120 (64%), Gaps = 10/120 (8%)
Query: 202 NQPPSQPPNQPPNQQPNNTSASLPSPLYPWMRSQF--------ERKRGRQTYTRYQTLEL 253
N S+ +P T P ++PWMR + KR R YTRYQTLEL
Sbjct: 149 NSSLSRAQTEPIATSTATTEGQTP-QIFPWMRKLHISHDMTGPDGKRARTAYTRYQTLEL 207
Query: 254 EKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSKDGG-SDAGSDITP 312
EKEFHFNRYLTRRRRIEIAHALCL+ERQIKIWFQNRRMKWKK+NK K + AGS P
Sbjct: 208 EKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNKLKSMSLATAGSAFQP 267
>gi|126308245|ref|XP_001367145.1| PREDICTED: homeobox protein Hox-B5 [Monodelphis domestica]
Length = 267
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 64/94 (68%), Positives = 70/94 (74%), Gaps = 9/94 (9%)
Query: 228 LYPWMRSQF--------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
++PWMR + KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+E
Sbjct: 174 IFPWMRKLHISHDMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSE 233
Query: 280 RQIKIWFQNRRMKWKKENKSKDGG-SDAGSDITP 312
RQIKIWFQNRRMKWKK+NK K + AGS P
Sbjct: 234 RQIKIWFQNRRMKWKKDNKLKSMSLATAGSAFQP 267
>gi|348521442|ref|XP_003448235.1| PREDICTED: homeobox protein Hox-C6a-like [Oreochromis niloticus]
Length = 234
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 65/100 (65%), Positives = 75/100 (75%), Gaps = 11/100 (11%)
Query: 227 PLYPWMRSQ---------FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 277
P+YPWM+ +R+RGRQ Y+RYQTLELEKEFHFNRYLTRRRRIEIA+ALCL
Sbjct: 120 PIYPWMQRMNSHSGVGYGTDRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCL 179
Query: 278 TERQIKIWFQNRRMKWKKENKSKDGGSDAGSDITPATSPQ 317
TERQIKIWFQNRRMKWKKE S + G++ T A+ Q
Sbjct: 180 TERQIKIWFQNRRMKWKKE--SNLTSTVTGTEQTGASQEQ 217
>gi|299473907|gb|ADJ18236.1| Hox7 protein [Gibbula varia]
Length = 247
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 66/87 (75%), Positives = 70/87 (80%), Gaps = 7/87 (8%)
Query: 226 SPLYPWMR------SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
S ++PWMR FE+KR RQTYTRYQTLELEKEFHFNRYLTRRRRIE+AH L LTE
Sbjct: 124 SAVFPWMRPGTAADVHFEQKRTRQTYTRYQTLELEKEFHFNRYLTRRRRIEVAHMLGLTE 183
Query: 280 RQIKIWFQNRRMKWKKENK-SKDGGSD 305
RQIKIWFQNRRMKWKKEN SK G D
Sbjct: 184 RQIKIWFQNRRMKWKKENNVSKLTGPD 210
>gi|432865300|ref|XP_004070515.1| PREDICTED: homeobox protein Hox-C6a-like [Oryzias latipes]
Length = 234
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 65/97 (67%), Positives = 74/97 (76%), Gaps = 11/97 (11%)
Query: 227 PLYPWMRSQ---------FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 277
P+YPWM+ +R+RGRQ Y+RYQTLELEKEFHFNRYLTRRRRIEIA+ALCL
Sbjct: 120 PIYPWMQRMNSHSGVGYGTDRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCL 179
Query: 278 TERQIKIWFQNRRMKWKKENKSKDGGSDAGSDITPAT 314
TERQIKIWFQNRRMKWKKE S + GS+ T A+
Sbjct: 180 TERQIKIWFQNRRMKWKKE--SNLTSTVTGSEQTGAS 214
>gi|195152067|ref|XP_002016960.1| GL22040 [Drosophila persimilis]
gi|194112017|gb|EDW34060.1| GL22040 [Drosophila persimilis]
Length = 472
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 65/103 (63%), Positives = 73/103 (70%), Gaps = 10/103 (9%)
Query: 206 SQPPNQPPNQQPNNTSASLPSPLYPWMR----------SQFERKRGRQTYTRYQTLELEK 255
S N+ + Q + P +YPWM+ + E KR R +YTRYQTLELEK
Sbjct: 293 SDSGNEAGSSQNSGNGKKNPPQIYPWMKRVHLGQSTVNANGETKRQRTSYTRYQTLELEK 352
Query: 256 EFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
EFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE+K
Sbjct: 353 EFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHK 395
>gi|312125841|gb|ADQ27864.1| fushi tarazu [Dermestes maculatus]
Length = 377
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 63/86 (73%), Positives = 72/86 (83%), Gaps = 6/86 (6%)
Query: 219 NTSASLPSP-LYPWMRSQFER-----KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIA 272
NT++ P+ +YPWM++ E KR RQTYTRYQTLELEKEFHFN+YLTRRRRIEIA
Sbjct: 223 NTNSVTPTNNIYPWMKANAEATNHGGKRTRQTYTRYQTLELEKEFHFNKYLTRRRRIEIA 282
Query: 273 HALCLTERQIKIWFQNRRMKWKKENK 298
HALCL+ERQIKIWFQNRRMK KK+NK
Sbjct: 283 HALCLSERQIKIWFQNRRMKAKKDNK 308
>gi|217035828|gb|ACJ74384.1| Hox6 [Branchiostoma lanceolatum]
Length = 227
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 62/79 (78%), Positives = 67/79 (84%), Gaps = 7/79 (8%)
Query: 227 PLYPWMRSQF-------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
P++PWMR E+KRGRQTYTRYQTLELEKEFHFN+YLTR+RRIEIAH L LTE
Sbjct: 116 PVFPWMRKGSSQTAMGEEKKRGRQTYTRYQTLELEKEFHFNKYLTRKRRIEIAHLLGLTE 175
Query: 280 RQIKIWFQNRRMKWKKENK 298
RQIKIWFQNRRMKWKKENK
Sbjct: 176 RQIKIWFQNRRMKWKKENK 194
>gi|154183818|gb|ABS70759.1| Hoxc6a [Haplochromis burtoni]
Length = 234
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 65/100 (65%), Positives = 75/100 (75%), Gaps = 11/100 (11%)
Query: 227 PLYPWMRSQ---------FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 277
P+YPWM+ +R+RGRQ Y+RYQTLELEKEFHFNRYLTRRRRIEIA+ALCL
Sbjct: 120 PIYPWMQRMNSHGGVGYGTDRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCL 179
Query: 278 TERQIKIWFQNRRMKWKKENKSKDGGSDAGSDITPATSPQ 317
TERQIKIWFQNRRMKWKKE S + G++ T A+ Q
Sbjct: 180 TERQIKIWFQNRRMKWKKE--SNLTSTVTGTEQTGASQEQ 217
>gi|28629649|gb|AAO43030.1| HoxB5 [Latimeria menadoensis]
Length = 225
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 64/94 (68%), Positives = 70/94 (74%), Gaps = 9/94 (9%)
Query: 228 LYPWMRSQF--------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
++PWMR + KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+E
Sbjct: 132 IFPWMRKLHISHDMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSE 191
Query: 280 RQIKIWFQNRRMKWKKENKSKDGG-SDAGSDITP 312
RQIKIWFQNRRMKWKK+NK K + AGS P
Sbjct: 192 RQIKIWFQNRRMKWKKDNKLKSMSLASAGSAFQP 225
>gi|397911068|gb|AFO68810.1| homeodomain-containing protein Hox6, partial [Branchiostoma
lanceolatum]
Length = 144
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 64/79 (81%), Positives = 69/79 (87%), Gaps = 7/79 (8%)
Query: 227 PLYPWMR---SQF----ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
P++PWMR SQ E+KRGRQTYTRYQTLELEKEFHFN+YLTR+RRIEIAH L LTE
Sbjct: 33 PVFPWMRKGSSQTAMGEEKKRGRQTYTRYQTLELEKEFHFNKYLTRKRRIEIAHLLGLTE 92
Query: 280 RQIKIWFQNRRMKWKKENK 298
RQIKIWFQNRRMKWKKENK
Sbjct: 93 RQIKIWFQNRRMKWKKENK 111
>gi|357623860|gb|EHJ74850.1| sex combs reduced-like protein [Danaus plexippus]
Length = 336
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 63/95 (66%), Positives = 73/95 (76%), Gaps = 10/95 (10%)
Query: 214 NQQPNNTSASLPSPLYPWMR----------SQFERKRGRQTYTRYQTLELEKEFHFNRYL 263
N + + ++ + P +YPWM+ + E KR R +YTRYQTLELEKEFHFNRYL
Sbjct: 210 NTKSSASAQANPPQIYPWMKRVHLGQSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYL 269
Query: 264 TRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
TRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE+K
Sbjct: 270 TRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHK 304
>gi|260835435|ref|XP_002612714.1| hypothetical protein BRAFLDRAFT_95001 [Branchiostoma floridae]
gi|160421813|gb|ABX39490.1| AmphiHox6 [Branchiostoma floridae]
gi|229298093|gb|EEN68723.1| hypothetical protein BRAFLDRAFT_95001 [Branchiostoma floridae]
Length = 227
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 64/79 (81%), Positives = 69/79 (87%), Gaps = 7/79 (8%)
Query: 227 PLYPWMR---SQF----ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
P++PWMR SQ E+KRGRQTYTRYQTLELEKEFHFN+YLTR+RRIEIAH L LTE
Sbjct: 116 PVFPWMRKGSSQTAMGEEKKRGRQTYTRYQTLELEKEFHFNKYLTRKRRIEIAHLLGLTE 175
Query: 280 RQIKIWFQNRRMKWKKENK 298
RQIKIWFQNRRMKWKKENK
Sbjct: 176 RQIKIWFQNRRMKWKKENK 194
>gi|12848710|dbj|BAB28059.1| unnamed protein product [Mus musculus]
Length = 230
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 72/121 (59%), Positives = 80/121 (66%), Gaps = 16/121 (13%)
Query: 205 PSQPPNQPPNQQPNNTSASLPSP----LYPWMRSQF--------ERKRGRQTYTRYQTLE 252
PS QP +P TS + P ++PWMR + KR R YTRYQTLE
Sbjct: 113 PSLARAQP---EPMATSTAAPEGQTPQIFPWMRKLHISHDMTGPDGKRARTAYTRYQTLE 169
Query: 253 LEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSKDGG-SDAGSDIT 311
LEKEFHFNRYLTRRRRIEIAHALCL+ERQIKIWFQNRRMKWKK+NK K + AGS
Sbjct: 170 LEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNKLKSMSLATAGSAFQ 229
Query: 312 P 312
P
Sbjct: 230 P 230
>gi|158702222|gb|ABW77442.1| homeobox protein HoxA5aa [Salmo salar]
Length = 282
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 68/113 (60%), Positives = 74/113 (65%), Gaps = 10/113 (8%)
Query: 207 QPPNQPPNQQPNNTSASLPSPLYPWMRSQF---------ERKRGRQTYTRYQTLELEKEF 257
+P + PN T + P + PWMR E KR R YTRYQTLELEKEF
Sbjct: 166 KPAGRAQTTSPNVTDGAQPH-ISPWMRKLHINHDSLTGPEGKRARTAYTRYQTLELEKEF 224
Query: 258 HFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSKDGGSDAGSDI 310
HFNRYLTRRRRIEIAHALCL+ERQIKIWFQNRRMKWKK+NK K A I
Sbjct: 225 HFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNKLKSMSMAAAGAI 277
>gi|28070939|emb|CAD61870.1| putative antennapedia protein 1 [Calanus helgolandicus]
Length = 76
Score = 134 bits (338), Expect = 5e-29, Method: Composition-based stats.
Identities = 68/78 (87%), Positives = 71/78 (91%), Gaps = 2/78 (2%)
Query: 238 RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 297
RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN
Sbjct: 1 RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 60
Query: 298 KSKDGGSDAGSDITPATS 315
KSK G D D +PA++
Sbjct: 61 KSKLDGPDM--DESPASN 76
>gi|354474766|ref|XP_003499601.1| PREDICTED: homeobox protein Hox-B5-like [Cricetulus griseus]
gi|344249142|gb|EGW05246.1| Homeobox protein Hox-B5 [Cricetulus griseus]
Length = 269
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 79/191 (41%), Positives = 92/191 (48%), Gaps = 39/191 (20%)
Query: 131 GIIPGPESPNDLVDPTLNNHHHHQHHHMNHHPHPHPQQQQPQQPPPQHMMYAQQPPPQHH 190
G P SP+D P ++ + + + P Q P + QP P
Sbjct: 109 GAKPAASSPSDQTTPASSSANFTEIDEASASSEPEEAASQLSSPS----LARAQPEPMAT 164
Query: 191 QVVVNHQQTPPNQPPSQPPNQPPNQQPNNTSASLPSPLYPWMRSQF--------ERKRGR 242
QTP ++PWMR + KR R
Sbjct: 165 STAAPEGQTPQ--------------------------IFPWMRKLHISHDMTGPDGKRAR 198
Query: 243 QTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSKDG 302
YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+ERQIKIWFQNRRMKWKK+NK K
Sbjct: 199 TAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNKLKSM 258
Query: 303 G-SDAGSDITP 312
+ AGS P
Sbjct: 259 SLATAGSAFQP 269
>gi|395532649|ref|XP_003768382.1| PREDICTED: homeobox protein Hox-B5 [Sarcophilus harrisii]
Length = 267
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 64/94 (68%), Positives = 70/94 (74%), Gaps = 9/94 (9%)
Query: 228 LYPWMRSQF--------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
++PWMR + KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+E
Sbjct: 174 IFPWMRKLHISHDMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSE 233
Query: 280 RQIKIWFQNRRMKWKKENKSKDGG-SDAGSDITP 312
RQIKIWFQNRRMKWKK+NK K + AGS P
Sbjct: 234 RQIKIWFQNRRMKWKKDNKLKSMSLATAGSAFQP 267
>gi|296202585|ref|XP_002748519.1| PREDICTED: homeobox protein Hox-B5 [Callithrix jacchus]
Length = 269
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 72/121 (59%), Positives = 80/121 (66%), Gaps = 16/121 (13%)
Query: 205 PSQPPNQPPNQQPNNTSASLPSP----LYPWMRSQF--------ERKRGRQTYTRYQTLE 252
PS QP +P TS + P ++PWMR + KR R YTRYQTLE
Sbjct: 152 PSLARAQP---EPMATSTAAPEGQTPQIFPWMRKLHISHDMTGPDGKRARTAYTRYQTLE 208
Query: 253 LEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSKDGG-SDAGSDIT 311
LEKEFHFNRYLTRRRRIEIAHALCL+ERQIKIWFQNRRMKWKK+NK K + AGS
Sbjct: 209 LEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNKLKSMSLATAGSAFQ 268
Query: 312 P 312
P
Sbjct: 269 P 269
>gi|441678824|ref|XP_003282736.2| PREDICTED: homeobox protein Hox-B7-like, partial [Nomascus
leucogenys]
Length = 119
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 63/73 (86%), Positives = 67/73 (91%), Gaps = 1/73 (1%)
Query: 237 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
+RKRGRQTYTRYQTLELEKEFH+NRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE
Sbjct: 38 DRKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 97
Query: 297 NKSKDGGSDAGSD 309
NK+ G+ G D
Sbjct: 98 NKTAGPGT-TGQD 109
>gi|449277038|gb|EMC85345.1| Homeobox protein Hox-B5a [Columba livia]
Length = 265
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 64/94 (68%), Positives = 70/94 (74%), Gaps = 9/94 (9%)
Query: 228 LYPWMRSQF--------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
++PWMR + KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+E
Sbjct: 172 IFPWMRKLHISHDMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSE 231
Query: 280 RQIKIWFQNRRMKWKKENKSKDGG-SDAGSDITP 312
RQIKIWFQNRRMKWKK+NK K + AGS P
Sbjct: 232 RQIKIWFQNRRMKWKKDNKLKSMSLASAGSAFQP 265
>gi|201023305|ref|NP_001128396.1| sex combs reduced [Nasonia vitripennis]
Length = 390
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 64/90 (71%), Positives = 69/90 (76%), Gaps = 10/90 (11%)
Query: 219 NTSASLPSPLYPWMR----------SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRR 268
N S P +YPWM+ + E KR R +YTRYQTLELEKEFHFNRYLTRRRR
Sbjct: 269 NGSGGNPPQIYPWMKRVHIGQSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRR 328
Query: 269 IEIAHALCLTERQIKIWFQNRRMKWKKENK 298
IEIAHALCLTERQIKIWFQNRRMKWKKE+K
Sbjct: 329 IEIAHALCLTERQIKIWFQNRRMKWKKEHK 358
>gi|522335|gb|AAA37842.1| homeobox protein [Mus musculus]
Length = 269
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 79/191 (41%), Positives = 92/191 (48%), Gaps = 39/191 (20%)
Query: 131 GIIPGPESPNDLVDPTLNNHHHHQHHHMNHHPHPHPQQQQPQQPPPQHMMYAQQPPPQHH 190
G P SP+D P ++ + + + P Q P + QP P
Sbjct: 109 GAKPSASSPSDQATPASSSANFTEIDEASASSEPEEAASQLSSPS----LARAQPEPMAT 164
Query: 191 QVVVNHQQTPPNQPPSQPPNQPPNQQPNNTSASLPSPLYPWMRSQF--------ERKRGR 242
QTP ++PWMR + KR R
Sbjct: 165 STAAPEGQTPQ--------------------------IFPWMRKLHISHDMTGPDGKRAR 198
Query: 243 QTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSKDG 302
YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+ERQIKIWFQNRRMKWKK+NK K
Sbjct: 199 TAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNKLKSM 258
Query: 303 G-SDAGSDITP 312
+ AGS P
Sbjct: 259 SLATAGSAFQP 269
>gi|214255|gb|AAA49749.1| homeo box protein, partial [Xenopus laevis]
Length = 88
Score = 134 bits (337), Expect = 5e-29, Method: Composition-based stats.
Identities = 61/70 (87%), Positives = 65/70 (92%)
Query: 237 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
+RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAH LCLTERQIKIWFQNRRMKWKKE
Sbjct: 7 DRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHVLCLTERQIKIWFQNRRMKWKKE 66
Query: 297 NKSKDGGSDA 306
NK+ S++
Sbjct: 67 NKASSPSSNS 76
>gi|195498914|ref|XP_002096729.1| GE25827 [Drosophila yakuba]
gi|194182830|gb|EDW96441.1| GE25827 [Drosophila yakuba]
Length = 419
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 65/103 (63%), Positives = 73/103 (70%), Gaps = 10/103 (9%)
Query: 206 SQPPNQPPNQQPNNTSASLPSPLYPWMR----------SQFERKRGRQTYTRYQTLELEK 255
S N+ + Q + P +YPWM+ + E KR R +YTRYQTLELEK
Sbjct: 284 SDSGNEAGSSQNSGNGKKNPPQIYPWMKRVHLGTSTVNANGETKRQRTSYTRYQTLELEK 343
Query: 256 EFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
EFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE+K
Sbjct: 344 EFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHK 386
>gi|2209200|gb|AAB61442.1| LOX5 [Helobdella robusta]
Length = 374
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 67/96 (69%), Positives = 74/96 (77%), Gaps = 7/96 (7%)
Query: 227 PLYPWMRS------QFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTER 280
P+YPWMRS F++KR RQTYTRYQTLELEKEF+ NRYLTRRRRIEIAH+L L+ER
Sbjct: 246 PIYPWMRSFVGPDFGFDQKRTRQTYTRYQTLELEKEFYSNRYLTRRRRIEIAHSLALSER 305
Query: 281 QIKIWFQNRRMKWKKENKS-KDGGSDAGSDITPATS 315
QIKIWFQNRRMKWKKEN K G DI P +S
Sbjct: 306 QIKIWFQNRRMKWKKENNVQKLTGPGGVGDIPPVSS 341
>gi|4504469|ref|NP_002138.1| homeobox protein Hox-B5 [Homo sapiens]
gi|114666352|ref|XP_001173004.1| PREDICTED: homeobox protein Hox-B5 [Pan troglodytes]
gi|297715933|ref|XP_002834298.1| PREDICTED: homeobox protein Hox-B5 [Pongo abelii]
gi|397514564|ref|XP_003827551.1| PREDICTED: homeobox protein Hox-B5 [Pan paniscus]
gi|403279481|ref|XP_003931278.1| PREDICTED: homeobox protein Hox-B5 [Saimiri boliviensis
boliviensis]
gi|400000|sp|P09067.3|HXB5_HUMAN RecName: Full=Homeobox protein Hox-B5; AltName: Full=Homeobox
protein HHO.C10; AltName: Full=Homeobox protein Hox-2A;
AltName: Full=Homeobox protein Hu-1
gi|11138933|gb|AAG31553.1|AF287967_3 homeobox B5 [Homo sapiens]
gi|184293|gb|AAA52682.1| homeobox protein [Homo sapiens]
gi|109659004|gb|AAI17248.1| Homeobox B5 [Homo sapiens]
gi|119615143|gb|EAW94737.1| homeobox B5 [Homo sapiens]
gi|189054616|dbj|BAG37466.1| unnamed protein product [Homo sapiens]
gi|208968499|dbj|BAG74088.1| homeobox B5 [synthetic construct]
gi|410212186|gb|JAA03312.1| homeobox B5 [Pan troglodytes]
Length = 269
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 64/94 (68%), Positives = 70/94 (74%), Gaps = 9/94 (9%)
Query: 228 LYPWMRSQF--------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
++PWMR + KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+E
Sbjct: 176 IFPWMRKLHISHDMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSE 235
Query: 280 RQIKIWFQNRRMKWKKENKSKDGG-SDAGSDITP 312
RQIKIWFQNRRMKWKK+NK K + AGS P
Sbjct: 236 RQIKIWFQNRRMKWKKDNKLKSMSLATAGSAFQP 269
>gi|338227733|gb|AEI91062.1| sex combs reduced [Onthophagus binodis]
Length = 300
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 61/81 (75%), Positives = 66/81 (81%), Gaps = 10/81 (12%)
Query: 228 LYPWMR----------SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 277
+YPWM+ + E KR R +YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL
Sbjct: 218 IYPWMKRVHLGQSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 277
Query: 278 TERQIKIWFQNRRMKWKKENK 298
TERQIKIWFQNRRMKWKKE+K
Sbjct: 278 TERQIKIWFQNRRMKWKKEHK 298
>gi|348562277|ref|XP_003466937.1| PREDICTED: homeobox protein Hox-B5-like isoform 1 [Cavia porcellus]
Length = 270
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 72/121 (59%), Positives = 80/121 (66%), Gaps = 16/121 (13%)
Query: 205 PSQPPNQPPNQQPNNTSASLPSP----LYPWMRSQF--------ERKRGRQTYTRYQTLE 252
PS QP +P TS + P ++PWMR + KR R YTRYQTLE
Sbjct: 153 PSLARAQP---EPMATSTAAPEGQAPQIFPWMRKLHISHDMTGPDGKRARTAYTRYQTLE 209
Query: 253 LEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSKDGG-SDAGSDIT 311
LEKEFHFNRYLTRRRRIEIAHALCL+ERQIKIWFQNRRMKWKK+NK K + AGS
Sbjct: 210 LEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNKLKSMSLATAGSAFQ 269
Query: 312 P 312
P
Sbjct: 270 P 270
>gi|426347612|ref|XP_004041443.1| PREDICTED: homeobox protein Hox-B5 [Gorilla gorilla gorilla]
Length = 269
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 64/94 (68%), Positives = 70/94 (74%), Gaps = 9/94 (9%)
Query: 228 LYPWMRSQF--------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
++PWMR + KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+E
Sbjct: 176 IFPWMRKLHISHDMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSE 235
Query: 280 RQIKIWFQNRRMKWKKENKSKDGG-SDAGSDITP 312
RQIKIWFQNRRMKWKK+NK K + AGS P
Sbjct: 236 RQIKIWFQNRRMKWKKDNKLKSMSLATAGSAFQP 269
>gi|34484445|gb|AAQ72845.1| Hoxb5b [Sphoeroides nephelus]
Length = 280
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 64/100 (64%), Positives = 72/100 (72%), Gaps = 15/100 (15%)
Query: 216 QPNNTSASLPSP-------LYPWMRSQF--------ERKRGRQTYTRYQTLELEKEFHFN 260
Q N ++S P+ ++PWMR + KR R YTRYQTLELEKEFHFN
Sbjct: 168 QDQNATSSTPTSNDCQTPQIFPWMRKLHISHDMTGPDGKRARTAYTRYQTLELEKEFHFN 227
Query: 261 RYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSK 300
RYLTRRRRIEIAHALCL+ERQIKIWFQNRRMKWKK+NK K
Sbjct: 228 RYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNKLK 267
>gi|332259417|ref|XP_003278786.1| PREDICTED: homeobox protein Hox-B5-like [Nomascus leucogenys]
Length = 269
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 72/121 (59%), Positives = 80/121 (66%), Gaps = 16/121 (13%)
Query: 205 PSQPPNQPPNQQPNNTSASLPSP----LYPWMRSQF--------ERKRGRQTYTRYQTLE 252
PS QP +P TS + P ++PWMR + KR R YTRYQTLE
Sbjct: 152 PSLARAQP---EPMATSTAAPEGQTPQIFPWMRKLHISHDMTGPDGKRARTAYTRYQTLE 208
Query: 253 LEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSKDGG-SDAGSDIT 311
LEKEFHFNRYLTRRRRIEIAHALCL+ERQIKIWFQNRRMKWKK+NK K + AGS
Sbjct: 209 LEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNKLKSMSLATAGSAFQ 268
Query: 312 P 312
P
Sbjct: 269 P 269
>gi|160358780|ref|NP_032294.2| homeobox protein Hox-B5 [Mus musculus]
gi|300794055|ref|NP_001178854.1| homeo box B5 [Rattus norvegicus]
gi|114152820|sp|P09079.3|HXB5_MOUSE RecName: Full=Homeobox protein Hox-B5; AltName: Full=Homeobox
protein H24.1; AltName: Full=Homeobox protein Hox-2.1;
AltName: Full=Homeobox protein Mu-1
gi|73695287|gb|AAI03608.1| Homeo box B5 [Mus musculus]
gi|73695374|gb|AAI03597.1| Homeo box B5 [Mus musculus]
gi|73695450|gb|AAI03596.1| Homeo box B5 [Mus musculus]
gi|73695452|gb|AAI03605.1| Homeo box B5 [Mus musculus]
gi|74225740|dbj|BAE21695.1| unnamed protein product [Mus musculus]
gi|148684080|gb|EDL16027.1| homeobox B5 [Mus musculus]
gi|149053984|gb|EDM05801.1| similar to homeotic protein Hox B5 - mouse (predicted) [Rattus
norvegicus]
Length = 269
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 64/94 (68%), Positives = 70/94 (74%), Gaps = 9/94 (9%)
Query: 228 LYPWMRSQF--------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
++PWMR + KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+E
Sbjct: 176 IFPWMRKLHISHDMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSE 235
Query: 280 RQIKIWFQNRRMKWKKENKSKDGG-SDAGSDITP 312
RQIKIWFQNRRMKWKK+NK K + AGS P
Sbjct: 236 RQIKIWFQNRRMKWKKDNKLKSMSLATAGSAFQP 269
>gi|798833|emb|CAA54348.1| unnamed protein product [Drosophila melanogaster]
Length = 417
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 65/103 (63%), Positives = 73/103 (70%), Gaps = 10/103 (9%)
Query: 206 SQPPNQPPNQQPNNTSASLPSPLYPWMR----------SQFERKRGRQTYTRYQTLELEK 255
S N+ + Q + P +YPWM+ + E KR R +YTRYQTLELEK
Sbjct: 282 SDSGNEAGSSQNSGNGKKNPPQIYPWMKRVHLGTSTVNANGETKRQRTSYTRYQTLELEK 341
Query: 256 EFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
EFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE+K
Sbjct: 342 EFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHK 384
>gi|520616|emb|CAA84518.1| Hox-6 homeodomain protein [Branchiostoma floridae]
gi|745778|prf||2016458E Hox-6 gene
Length = 227
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 64/79 (81%), Positives = 69/79 (87%), Gaps = 7/79 (8%)
Query: 227 PLYPWMR---SQF----ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
P++PWMR SQ E+KRGRQTYTRYQTLELEKEFHFN+YLTR+RRIEIAH L LTE
Sbjct: 116 PVFPWMRKGSSQTAMGEEKKRGRQTYTRYQTLELEKEFHFNKYLTRKRRIEIAHLLGLTE 175
Query: 280 RQIKIWFQNRRMKWKKENK 298
RQIKIWFQNRRMKWKKENK
Sbjct: 176 RQIKIWFQNRRMKWKKENK 194
>gi|54261740|ref|NP_571176.2| homeobox protein Hox-B5a [Danio rerio]
gi|60392406|sp|P09014.2|HXB5A_DANRE RecName: Full=Homeobox protein Hox-B5a; Short=Hox-B5; AltName:
Full=Homeobox protein Zf-21
gi|26984637|emb|CAD59114.1| SI:dZ254O17.4 (homeo box protein B5a) [Danio rerio]
gi|47938028|gb|AAH71493.1| Homeo box B5a [Danio rerio]
Length = 275
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 64/94 (68%), Positives = 70/94 (74%), Gaps = 9/94 (9%)
Query: 228 LYPWMRSQF--------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
++PWMR + KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+E
Sbjct: 182 IFPWMRKLHISHDMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSE 241
Query: 280 RQIKIWFQNRRMKWKKENKSKDGG-SDAGSDITP 312
RQIKIWFQNRRMKWKK+NK K + AGS P
Sbjct: 242 RQIKIWFQNRRMKWKKDNKLKSMSLATAGSAFQP 275
>gi|149033356|gb|EDL88157.1| homeo box A7 (mapped), isoform CRA_a [Rattus norvegicus]
Length = 108
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 64/80 (80%), Positives = 68/80 (85%), Gaps = 1/80 (1%)
Query: 237 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
+RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE
Sbjct: 7 DRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 66
Query: 297 NKSKDGGSDAG-SDITPATS 315
+K + A D P+ S
Sbjct: 67 HKDESQAPTAVPEDAVPSVS 86
>gi|62526079|dbj|BAD95556.1| Hoxb-5 [Gallus gallus]
Length = 257
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 60/81 (74%), Positives = 65/81 (80%), Gaps = 8/81 (9%)
Query: 228 LYPWMRSQF--------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
++PWMR + KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+E
Sbjct: 171 IFPWMRKLHISHDMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSE 230
Query: 280 RQIKIWFQNRRMKWKKENKSK 300
RQIKIWFQNRRMKWKK+NK K
Sbjct: 231 RQIKIWFQNRRMKWKKDNKLK 251
>gi|410895281|ref|XP_003961128.1| PREDICTED: homeobox protein Hox-B5b-like [Takifugu rubripes]
gi|119370786|sp|Q1KKX0.1|HXB5B_FUGRU RecName: Full=Homeobox protein Hox-B5b
gi|94482807|gb|ABF22424.1| homeobox protein HoxB5b [Takifugu rubripes]
Length = 280
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 64/100 (64%), Positives = 72/100 (72%), Gaps = 15/100 (15%)
Query: 216 QPNNTSASLPSP-------LYPWMRSQF--------ERKRGRQTYTRYQTLELEKEFHFN 260
Q N ++S P+ ++PWMR + KR R YTRYQTLELEKEFHFN
Sbjct: 168 QDQNATSSTPTSNDCQTPQIFPWMRKLHISHDMTGPDGKRARTAYTRYQTLELEKEFHFN 227
Query: 261 RYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSK 300
RYLTRRRRIEIAHALCL+ERQIKIWFQNRRMKWKK+NK K
Sbjct: 228 RYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNKLK 267
>gi|62537|emb|CAA48320.1| homeodomain protein [Danio rerio]
gi|62555|emb|CAA31290.1| ZF-21 gene product [Danio rerio]
Length = 275
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 64/94 (68%), Positives = 70/94 (74%), Gaps = 9/94 (9%)
Query: 228 LYPWMRSQF--------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
++PWMR + KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+E
Sbjct: 182 IFPWMRKLHISHDMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSE 241
Query: 280 RQIKIWFQNRRMKWKKENKSKDGG-SDAGSDITP 312
RQIKIWFQNRRMKWKK+NK K + AGS P
Sbjct: 242 RQIKIWFQNRRMKWKKDNKLKSMSLATAGSAFQP 275
>gi|432925214|ref|XP_004080700.1| PREDICTED: homeobox protein Hox-B5b-like [Oryzias latipes]
gi|74267553|dbj|BAE44275.1| hoxB5b [Oryzias latipes]
gi|83016957|dbj|BAE53482.1| hoxB5b [Oryzias latipes]
Length = 281
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 64/99 (64%), Positives = 73/99 (73%), Gaps = 14/99 (14%)
Query: 216 QPNNTSASLPS------PLYPWMRSQF--------ERKRGRQTYTRYQTLELEKEFHFNR 261
+PN TS++ + ++PWMR + KR R YTRYQTLELEKEFHFNR
Sbjct: 170 EPNATSSTTTANECQTPQIFPWMRKLHISHDMTGPDGKRARTAYTRYQTLELEKEFHFNR 229
Query: 262 YLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSK 300
YLTRRRRIEIAHALCL+ERQIKIWFQNRRMKWKK+NK K
Sbjct: 230 YLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNKLK 268
>gi|440899269|gb|ELR50598.1| Homeobox protein Hox-A5 [Bos grunniens mutus]
Length = 190
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 65/109 (59%), Positives = 71/109 (65%), Gaps = 9/109 (8%)
Query: 201 PNQPPSQPPNQPPNQQPNNTSASLPSPLYPWMRSQF---------ERKRGRQTYTRYQTL 251
P + Q Q + + +YPWMR E KR R YTRYQTL
Sbjct: 69 PEEDAPASSEQASAQSEPSPAPPAQPQIYPWMRKLHISHDNIGGPEGKRARTAYTRYQTL 128
Query: 252 ELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSK 300
ELEKEFHFNRYLTRRRRIEIAHALCL+ERQIKIWFQNRRMKWKK+NK K
Sbjct: 129 ELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNKLK 177
>gi|64742|emb|CAA31020.1| unnamed protein product [Xenopus laevis]
Length = 152
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 63/94 (67%), Positives = 72/94 (76%), Gaps = 12/94 (12%)
Query: 228 LYPWMRSQ---------FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWM+ +R+RGRQ Y+RYQTLELEKEFHFNRYLTRRRRIEIA+ALCLT
Sbjct: 40 IYPWMQRMNSHSGVGYGTDRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLT 99
Query: 279 ERQIKIWFQNRRMKWKKENKSKD---GGSDAGSD 309
ERQIKIWFQNRRMKWKKE+ GG+ A +D
Sbjct: 100 ERQIKIWFQNRRMKWKKESNLSSTLPGGTGAAAD 133
>gi|60392405|sp|P09013.2|HXB5B_DANRE RecName: Full=Homeobox protein Hox-B5b; AltName: Full=Homeobox
protein Zf-54; AltName: Full=Hox-B5-like
gi|22316136|emb|CAD44458.1| homeo box protein B5b [Danio rerio]
Length = 276
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 60/81 (74%), Positives = 65/81 (80%), Gaps = 8/81 (9%)
Query: 228 LYPWMRSQF--------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
++PWMR + KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+E
Sbjct: 183 IFPWMRKLHISHDMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSE 242
Query: 280 RQIKIWFQNRRMKWKKENKSK 300
RQIKIWFQNRRMKWKK+NK K
Sbjct: 243 RQIKIWFQNRRMKWKKDNKLK 263
>gi|24644694|ref|NP_524248.2| Sex combs reduced, isoform A [Drosophila melanogaster]
gi|45553277|ref|NP_996165.1| Sex combs reduced, isoform B [Drosophila melanogaster]
gi|68067436|sp|P09077.5|SCR_DROME RecName: Full=Homeotic protein Sex combs reduced
gi|4389425|gb|AAD19795.1| homeodomain protein [Drosophila melanogaster]
gi|7298875|gb|AAF54082.1| Sex combs reduced, isoform A [Drosophila melanogaster]
gi|45446383|gb|AAS65103.1| Sex combs reduced, isoform B [Drosophila melanogaster]
Length = 417
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 65/103 (63%), Positives = 73/103 (70%), Gaps = 10/103 (9%)
Query: 206 SQPPNQPPNQQPNNTSASLPSPLYPWMR----------SQFERKRGRQTYTRYQTLELEK 255
S N+ + Q + P +YPWM+ + E KR R +YTRYQTLELEK
Sbjct: 282 SDSGNEAGSSQNSGNGKKNPPQIYPWMKRVHLGTSTVNANGETKRQRTSYTRYQTLELEK 341
Query: 256 EFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
EFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE+K
Sbjct: 342 EFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHK 384
>gi|194899151|ref|XP_001979124.1| GG10180 [Drosophila erecta]
gi|190650827|gb|EDV48082.1| GG10180 [Drosophila erecta]
Length = 467
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 65/103 (63%), Positives = 73/103 (70%), Gaps = 10/103 (9%)
Query: 206 SQPPNQPPNQQPNNTSASLPSPLYPWMR----------SQFERKRGRQTYTRYQTLELEK 255
S N+ + Q + P +YPWM+ + E KR R +YTRYQTLELEK
Sbjct: 332 SDSGNEAGSSQNSGNGKKNPPQIYPWMKRVHLGTSTVNANGETKRQRTSYTRYQTLELEK 391
Query: 256 EFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
EFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE+K
Sbjct: 392 EFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHK 434
>gi|410899256|ref|XP_003963113.1| PREDICTED: homeobox protein Hox-C6a-like [Takifugu rubripes]
gi|82227628|sp|O42504.1|HXC6A_FUGRU RecName: Full=Homeobox protein Hox-C6a; AltName: Full=FrHOXC-6
gi|2341089|gb|AAB68682.1| homeobox protein HOXC-6 [Takifugu rubripes]
gi|94482830|gb|ABF22446.1| homeobox protein HoxC6a [Takifugu rubripes]
Length = 236
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 60/80 (75%), Positives = 67/80 (83%), Gaps = 9/80 (11%)
Query: 227 PLYPWMRSQ---------FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 277
P+YPWM+ +R+RGRQ Y+RYQTLELEKEFHFNRYLTRRRRIEIA+ALCL
Sbjct: 120 PIYPWMQRMNSHSGVGYGTDRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCL 179
Query: 278 TERQIKIWFQNRRMKWKKEN 297
TERQIKIWFQNRRMKWKKE+
Sbjct: 180 TERQIKIWFQNRRMKWKKES 199
>gi|53749656|ref|NP_571612.2| homeobox protein Hox-B5b [Danio rerio]
gi|50417206|gb|AAH78285.1| Homeo box B5b [Danio rerio]
Length = 276
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 60/81 (74%), Positives = 65/81 (80%), Gaps = 8/81 (9%)
Query: 228 LYPWMRSQF--------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
++PWMR + KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+E
Sbjct: 183 IFPWMRKLHISHDMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSE 242
Query: 280 RQIKIWFQNRRMKWKKENKSK 300
RQIKIWFQNRRMKWKK+NK K
Sbjct: 243 RQIKIWFQNRRMKWKKDNKLK 263
>gi|165873665|gb|ABY67957.1| lox5 hox protein [Capitella teleta]
gi|443689508|gb|ELT91882.1| hypothetical protein CAPTEDRAFT_168125 [Capitella teleta]
Length = 284
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 62/77 (80%), Positives = 67/77 (87%), Gaps = 6/77 (7%)
Query: 227 PLYPWMR------SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTER 280
P+YPWMR +E+KR RQTYTRYQTLELEKEFH+NRYLTRRRRIEIAHAL LTER
Sbjct: 163 PIYPWMRPLSGADFGYEQKRTRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALQLTER 222
Query: 281 QIKIWFQNRRMKWKKEN 297
QIKIWFQNRRMK+KKEN
Sbjct: 223 QIKIWFQNRRMKYKKEN 239
>gi|86515396|ref|NP_001034523.1| cephalothorax [Tribolium castaneum]
gi|13241681|gb|AAK16422.1|AF321227_2 Scr [Tribolium castaneum]
gi|270002805|gb|EEZ99252.1| sex combs reduced [Tribolium castaneum]
Length = 312
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 63/87 (72%), Positives = 69/87 (79%), Gaps = 10/87 (11%)
Query: 222 ASLPSPLYPWMR----------SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEI 271
+S P +YPWM+ + E KR R +YTRYQTLELEKEFHFNRYLTRRRRIEI
Sbjct: 194 SSNPPQIYPWMKRVHLGQSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEI 253
Query: 272 AHALCLTERQIKIWFQNRRMKWKKENK 298
AHALCLTERQIKIWFQNRRMKWKKE+K
Sbjct: 254 AHALCLTERQIKIWFQNRRMKWKKEHK 280
>gi|123204462|gb|ABM73560.1| homeodomain protein [Megalobrama amblycephala]
Length = 274
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 60/81 (74%), Positives = 65/81 (80%), Gaps = 8/81 (9%)
Query: 228 LYPWMRSQF--------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
++PWMR + KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+E
Sbjct: 183 IFPWMRKLHISHDMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSE 242
Query: 280 RQIKIWFQNRRMKWKKENKSK 300
RQIKIWFQNRRMKWKK+NK K
Sbjct: 243 RQIKIWFQNRRMKWKKDNKLK 263
>gi|7229537|gb|AAF42868.1|AF227628_1 sex combs reduced Scr [Tribolium castaneum]
gi|54607266|gb|AAL26542.2| cephalothorax [Tribolium castaneum]
gi|54607268|gb|AAL27023.2| cephalothorax [Tribolium castaneum]
Length = 312
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 63/87 (72%), Positives = 69/87 (79%), Gaps = 10/87 (11%)
Query: 222 ASLPSPLYPWMR----------SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEI 271
+S P +YPWM+ + E KR R +YTRYQTLELEKEFHFNRYLTRRRRIEI
Sbjct: 194 SSNPPQIYPWMKRVHLGQSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEI 253
Query: 272 AHALCLTERQIKIWFQNRRMKWKKENK 298
AHALCLTERQIKIWFQNRRMKWKKE+K
Sbjct: 254 AHALCLTERQIKIWFQNRRMKWKKEHK 280
>gi|220898182|gb|ACL81438.1| HoxA6 [Latimeria menadoensis]
Length = 230
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 64/98 (65%), Positives = 75/98 (76%), Gaps = 11/98 (11%)
Query: 210 NQPPNQQPNNTSASLPSPLYPWMRSQFER---------KRGRQTYTRYQTLELEKEFHFN 260
N+ N++ N+ +P++PWM+ +RGRQTYTRYQTLELEKEFHFN
Sbjct: 117 NKILNEEVND--RRYTTPIFPWMQRMNSCTGTEYGTHGRRGRQTYTRYQTLELEKEFHFN 174
Query: 261 RYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
RYLTRRRRIEIA+ALCLTERQIKIWFQNRRMKWKKE+K
Sbjct: 175 RYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKESK 212
>gi|383849607|ref|XP_003700436.1| PREDICTED: homeobox protein Hox-A5a-like [Megachile rotundata]
Length = 373
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 61/81 (75%), Positives = 66/81 (81%), Gaps = 10/81 (12%)
Query: 228 LYPWMR----------SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 277
+YPWM+ + E KR R +YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL
Sbjct: 261 IYPWMKRVHIGQSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 320
Query: 278 TERQIKIWFQNRRMKWKKENK 298
TERQIKIWFQNRRMKWKKE+K
Sbjct: 321 TERQIKIWFQNRRMKWKKEHK 341
>gi|348562279|ref|XP_003466938.1| PREDICTED: homeobox protein Hox-B5-like isoform 2 [Cavia porcellus]
Length = 271
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 64/95 (67%), Positives = 70/95 (73%), Gaps = 10/95 (10%)
Query: 228 LYPWMRSQF---------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
++PWMR + KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+
Sbjct: 177 IFPWMRKLHISHDNMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLS 236
Query: 279 ERQIKIWFQNRRMKWKKENKSKDGG-SDAGSDITP 312
ERQIKIWFQNRRMKWKK+NK K + AGS P
Sbjct: 237 ERQIKIWFQNRRMKWKKDNKLKSMSLATAGSAFQP 271
>gi|351713531|gb|EHB16450.1| Homeobox protein Hox-B5 [Heterocephalus glaber]
Length = 245
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 72/121 (59%), Positives = 81/121 (66%), Gaps = 16/121 (13%)
Query: 205 PSQPPNQPPNQQPNNTSASLPSP----LYPWMRSQF--------ERKRGRQTYTRYQTLE 252
PS+ QP +P TS + P ++PWMR + KR R YTRYQTLE
Sbjct: 128 PSRARAQP---EPMATSTAAPEGQAPQIFPWMRKLHISHDMTGPDGKRARTAYTRYQTLE 184
Query: 253 LEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSKDGG-SDAGSDIT 311
LEKEFHFNRYLTRRRRIEIAHALCL+ERQIKIWFQNRRMKWKK+NK K + AGS
Sbjct: 185 LEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNKLKSMSLATAGSAFQ 244
Query: 312 P 312
P
Sbjct: 245 P 245
>gi|27374237|gb|AAO00997.1| Antp-PA [Drosophila erecta]
gi|27374285|gb|AAO01039.1| Antp-PA [Drosophila pseudoobscura]
Length = 83
Score = 134 bits (336), Expect = 7e-29, Method: Composition-based stats.
Identities = 71/83 (85%), Positives = 73/83 (87%), Gaps = 2/83 (2%)
Query: 237 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE
Sbjct: 1 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 60
Query: 297 NKSKD--GGSDAGSDITPATSPQ 317
NK+K G G +ITP SPQ
Sbjct: 61 NKTKGEPGSGGEGDEITPPNSPQ 83
>gi|255742445|gb|ACU32559.1| homeobox protein HoxB5 [Callorhinchus milii]
Length = 260
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 62/89 (69%), Positives = 68/89 (76%), Gaps = 9/89 (10%)
Query: 228 LYPWMR---------SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
++PWMR S + KR R YTR+QTLELEKEFHFNRYLTRRRRIEIAHALCL+
Sbjct: 166 IFPWMRKLHIGQDGLSGPDGKRARTAYTRFQTLELEKEFHFNRYLTRRRRIEIAHALCLS 225
Query: 279 ERQIKIWFQNRRMKWKKENKSKDGGSDAG 307
ERQIKIWFQNRRMKWKK+NK K AG
Sbjct: 226 ERQIKIWFQNRRMKWKKDNKLKSMSMTAG 254
>gi|195568828|ref|XP_002102414.1| GD19518 [Drosophila simulans]
gi|194198341|gb|EDX11917.1| GD19518 [Drosophila simulans]
Length = 463
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 65/103 (63%), Positives = 73/103 (70%), Gaps = 10/103 (9%)
Query: 206 SQPPNQPPNQQPNNTSASLPSPLYPWMR----------SQFERKRGRQTYTRYQTLELEK 255
S N+ + Q + P +YPWM+ + E KR R +YTRYQTLELEK
Sbjct: 328 SDSGNEAGSSQNSGNGKKNPPQIYPWMKRVHLGTSTVNANGETKRQRTSYTRYQTLELEK 387
Query: 256 EFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
EFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE+K
Sbjct: 388 EFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHK 430
>gi|4322074|gb|AAD15946.1| homeobox protein [Danio rerio]
Length = 276
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 108/321 (33%), Positives = 135/321 (42%), Gaps = 79/321 (24%)
Query: 1 MSSYFANSYMPDIKNGGVLPPEHHQQHHYGATVLPQNNGVEDPSMYDPRQVHHYGQVPNN 60
MSSYF NS+ NG +Q +YG NG + S D +H G NN
Sbjct: 1 MSSYFLNSFSGRYPNG-----SDYQLLNYGT------NGAMNASYRDSTSMHS-GSFGNN 48
Query: 61 GQPVHGMPYPRFPPYDRMDIR----NAAYYGAHEGGMEQYPRPDSPSMGHMGPQNGHQTP 116
Y+ +D+ N ++GA + P +T
Sbjct: 49 --------------YNGIDLSVNRPNNGHFGAVGDNSRAFQNP------------SQETR 82
Query: 117 VVYASCKLQA------AVGNGI-IPGPESPNDLVDPTLNNHHHHQHHHMNHHPHPHPQQQ 169
+SC L + A + + + G P+D PT N +++ H
Sbjct: 83 YRQSSCSLSSPDPLSCATSDTLELKGSSPPSDQSTPT-GNSRLTNSNNLTSSNSTHFADT 141
Query: 170 QPQQPPPQHMMYAQQPPPQH--HQVVVNHQQTPPNQPPSQPPNQPPNQQPNNTSASLPSP 227
+ AQ H Q V T PN Q P
Sbjct: 142 DETNVSSETEEGAQTTTTSHTQKQESVATSTTTPND------GQTP-------------Q 182
Query: 228 LYPWMRSQF--------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
++PWMR + KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+E
Sbjct: 183 IFPWMRKLHISHDMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSE 242
Query: 280 RQIKIWFQNRRMKWKKENKSK 300
RQIKIWFQNRRMKWKK+NK K
Sbjct: 243 RQIKIWFQNRRMKWKKDNKLK 263
>gi|270065291|gb|ACZ60640.1| sex combs reduced [Oncopeltus fasciatus]
Length = 302
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 64/94 (68%), Positives = 72/94 (76%), Gaps = 10/94 (10%)
Query: 215 QQPNNTSASLPSPLYPWMR----------SQFERKRGRQTYTRYQTLELEKEFHFNRYLT 264
+ P ++S P +YPWM+ + E KR R +YTRYQTLELEKEFHFNRYLT
Sbjct: 181 KSPGQQASSNPPQIYPWMKRVHLGQSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLT 240
Query: 265 RRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
RRRRIEIAHALCLTERQIKIWFQNRRMKWKKE+K
Sbjct: 241 RRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHK 274
>gi|410980867|ref|XP_003996795.1| PREDICTED: homeobox protein Hox-B5 [Felis catus]
Length = 269
Score = 133 bits (335), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 72/121 (59%), Positives = 80/121 (66%), Gaps = 16/121 (13%)
Query: 205 PSQPPNQPPNQQPNNTSASLPSP----LYPWMRSQF--------ERKRGRQTYTRYQTLE 252
PS QP +P TS + P ++PWMR + KR R YTRYQTLE
Sbjct: 152 PSLARAQP---EPMATSTAAPEGQTPQIFPWMRKLHISHDMTGPDGKRARTAYTRYQTLE 208
Query: 253 LEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSKDGG-SDAGSDIT 311
LEKEFHFNRYLTRRRRIEIAHALCL+ERQIKIWFQNRRMKWKK+NK K + AGS
Sbjct: 209 LEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNKLKSMSLATAGSAFQ 268
Query: 312 P 312
P
Sbjct: 269 P 269
>gi|332692523|gb|AEE90199.1| Homeobox C6b [Anguilla anguilla]
gi|385654516|gb|AFI62012.1| Hox-C6b [Anguilla japonica]
Length = 233
Score = 133 bits (335), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 67/121 (55%), Positives = 78/121 (64%), Gaps = 14/121 (11%)
Query: 185 PPPQHHQVVVNHQQTPPNQPPSQPPNQPPNQQPNNTSASLPSPLYPWMRSQ--------F 236
P + V +N Q + S P +Q N +YPWM+
Sbjct: 85 PSCRQTSVGLNGQSSLTQDYSSDQARTGPQEQKGNI------QIYPWMQRMNSHRIGYGS 138
Query: 237 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
+R+RGRQ Y+RYQTLELEKEFHFNRYLTRRRRIEIA+ALCLTERQIKIWFQNRRMKWKKE
Sbjct: 139 DRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 198
Query: 297 N 297
+
Sbjct: 199 S 199
>gi|281344381|gb|EFB19965.1| hypothetical protein PANDA_005012 [Ailuropoda melanoleuca]
Length = 256
Score = 133 bits (335), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 68/118 (57%), Positives = 78/118 (66%), Gaps = 19/118 (16%)
Query: 214 NQQPNNTSASLPSP----------LYPWMRSQF--------ERKRGRQTYTRYQTLELEK 255
+ +P ++ L SP ++PWMR + KR R YTRYQTLELEK
Sbjct: 139 SSEPEEAASQLSSPSPAPEGQTPQIFPWMRKLHISHDMTGPDGKRARTAYTRYQTLELEK 198
Query: 256 EFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSKDGG-SDAGSDITP 312
EFHFNRYLTRRRRIEIAHALCL+ERQIKIWFQNRRMKWKK+NK K + AGS P
Sbjct: 199 EFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNKLKSMSLATAGSAFQP 256
>gi|195110413|ref|XP_001999776.1| GI24715 [Drosophila mojavensis]
gi|193916370|gb|EDW15237.1| GI24715 [Drosophila mojavensis]
Length = 418
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 61/81 (75%), Positives = 66/81 (81%), Gaps = 10/81 (12%)
Query: 228 LYPWMR----------SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 277
+YPWM+ + E KR R +YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL
Sbjct: 305 IYPWMKRVHLGQSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 364
Query: 278 TERQIKIWFQNRRMKWKKENK 298
TERQIKIWFQNRRMKWKKE+K
Sbjct: 365 TERQIKIWFQNRRMKWKKEHK 385
>gi|224045302|ref|XP_002192602.1| PREDICTED: homeobox protein Hox-A5 [Taeniopygia guttata]
Length = 348
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 67/105 (63%), Positives = 73/105 (69%), Gaps = 11/105 (10%)
Query: 208 PPNQPPNQQPNNTSASLPSP--LYPWMRSQF---------ERKRGRQTYTRYQTLELEKE 256
P + P + S + PS +YPWMR E KR R YTRYQTLELEKE
Sbjct: 232 PASSEQASAPTDQSTAQPSQPQIYPWMRKLHISHDNIGGPEGKRARTAYTRYQTLELEKE 291
Query: 257 FHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSKD 301
FHFNRYLTRRRRIEIAHALCL+ERQIKIWFQNRRMKWKK+NK K
Sbjct: 292 FHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNKLKS 336
>gi|260835437|ref|XP_002612715.1| hypothetical protein BRAFLDRAFT_229261 [Branchiostoma floridae]
gi|229298094|gb|EEN68724.1| hypothetical protein BRAFLDRAFT_229261 [Branchiostoma floridae]
Length = 122
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 64/83 (77%), Positives = 66/83 (79%), Gaps = 8/83 (9%)
Query: 227 PLYPWMRS--------QFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
P+YPWMR + KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT
Sbjct: 26 PMYPWMRKIHLNHSAGTGDNKRTRTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 85
Query: 279 ERQIKIWFQNRRMKWKKENKSKD 301
ERQIKIWFQNRRMKWKKENK K
Sbjct: 86 ERQIKIWFQNRRMKWKKENKLKS 108
>gi|317419676|emb|CBN81713.1| Homeobox protein Hox-B6b [Dicentrarchus labrax]
Length = 275
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 63/80 (78%), Positives = 67/80 (83%), Gaps = 9/80 (11%)
Query: 228 LYPWMRSQ-------F--ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWM+ F +RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEI+HALCLT
Sbjct: 140 IYPWMQRMNACSAGPFGNSGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEISHALCLT 199
Query: 279 ERQIKIWFQNRRMKWKKENK 298
ERQIKIWFQNRRMKWKKENK
Sbjct: 200 ERQIKIWFQNRRMKWKKENK 219
>gi|13128915|gb|AAK13077.1| Antp [Porcellio scaber]
Length = 81
Score = 133 bits (335), Expect = 9e-29, Method: Composition-based stats.
Identities = 66/68 (97%), Positives = 67/68 (98%)
Query: 233 RSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMK 292
R QFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMK
Sbjct: 1 RWQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMK 60
Query: 293 WKKENKSK 300
WKKENK+K
Sbjct: 61 WKKENKTK 68
>gi|242011836|ref|XP_002426650.1| Ultrabithorax, putative [Pediculus humanus corporis]
gi|212510814|gb|EEB13912.1| Ultrabithorax, putative [Pediculus humanus corporis]
Length = 356
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 61/81 (75%), Positives = 66/81 (81%), Gaps = 10/81 (12%)
Query: 228 LYPWMR----------SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 277
+YPWM+ + E KR R +YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL
Sbjct: 243 IYPWMKRVHLGQSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 302
Query: 278 TERQIKIWFQNRRMKWKKENK 298
TERQIKIWFQNRRMKWKKE+K
Sbjct: 303 TERQIKIWFQNRRMKWKKEHK 323
>gi|88604718|gb|ABD46730.1| homeobox protein fushi tarazu [Endeis spinosa]
Length = 302
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 61/75 (81%), Positives = 64/75 (85%), Gaps = 4/75 (5%)
Query: 228 LYPWMRSQFER----KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIK 283
YPWM+S + KR RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHAL L+ERQIK
Sbjct: 194 FYPWMKSYTDNSSGPKRTRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALGLSERQIK 253
Query: 284 IWFQNRRMKWKKENK 298
IWFQNRRMK KKENK
Sbjct: 254 IWFQNRRMKAKKENK 268
>gi|158702291|gb|ABW77488.1| homeobox protein HoxB5ba [Salmo salar]
Length = 279
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/100 (64%), Positives = 72/100 (72%), Gaps = 14/100 (14%)
Query: 215 QQPNNTSASLPS------PLYPWMRSQF--------ERKRGRQTYTRYQTLELEKEFHFN 260
Q+ NN +++ S ++PWMR + KR R YTRYQTLELEKEFHFN
Sbjct: 167 QESNNATSTTISNDCQTPQIFPWMRKLHINHEMAGPDGKRARTAYTRYQTLELEKEFHFN 226
Query: 261 RYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSK 300
RYLTRRRRIEIAH LCLTERQIKIWFQNRRMKWKK+NK K
Sbjct: 227 RYLTRRRRIEIAHTLCLTERQIKIWFQNRRMKWKKDNKLK 266
>gi|15825440|gb|AAL09697.1| cephalothorax [Tribolium castaneum]
Length = 268
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 63/87 (72%), Positives = 69/87 (79%), Gaps = 10/87 (11%)
Query: 222 ASLPSPLYPWMR----------SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEI 271
+S P +YPWM+ + E KR R +YTRYQTLELEKEFHFNRYLTRRRRIEI
Sbjct: 150 SSNPPQIYPWMKRVHLGQSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEI 209
Query: 272 AHALCLTERQIKIWFQNRRMKWKKENK 298
AHALCLTERQIKIWFQNRRMKWKKE+K
Sbjct: 210 AHALCLTERQIKIWFQNRRMKWKKEHK 236
>gi|213510826|ref|NP_001133040.1| homeobox protein HoxA5ab [Salmo salar]
gi|157816063|gb|ABV82050.1| homeobox protein HoxA5ab [Salmo salar]
gi|158702242|gb|ABW77452.1| homeobox protein HoxA5ab [Salmo salar]
Length = 285
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 63/92 (68%), Positives = 67/92 (72%), Gaps = 9/92 (9%)
Query: 228 LYPWMRSQF---------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWMR E KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+
Sbjct: 189 IYPWMRKLHISHDSLTGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLS 248
Query: 279 ERQIKIWFQNRRMKWKKENKSKDGGSDAGSDI 310
ERQIKIWFQNRRMKWKK+NK K A +
Sbjct: 249 ERQIKIWFQNRRMKWKKDNKLKSMSMAAAGGV 280
>gi|387201|gb|AAA37830.1| m5-4 protein, partial [Mus musculus]
Length = 97
Score = 133 bits (335), Expect = 1e-28, Method: Composition-based stats.
Identities = 60/71 (84%), Positives = 64/71 (90%)
Query: 239 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
+RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIA+ALCLTERQIKIWFQNRRMKWKKENK
Sbjct: 20 RRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKENK 79
Query: 299 SKDGGSDAGSD 309
+ +G D
Sbjct: 80 LINSTQASGED 90
>gi|317419675|emb|CBN81712.1| Homeobox protein Hox-B5b [Dicentrarchus labrax]
Length = 287
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/90 (71%), Positives = 69/90 (76%), Gaps = 9/90 (10%)
Query: 220 TSASLPSP-LYPWMRSQF--------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIE 270
TS SP ++PWMR + KR R YTRYQTLELEKEFHFNRYLTRRRRIE
Sbjct: 185 TSNDCQSPQIFPWMRKLHISHDMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIE 244
Query: 271 IAHALCLTERQIKIWFQNRRMKWKKENKSK 300
IAHALCL+ERQIKIWFQNRRMKWKK+NK K
Sbjct: 245 IAHALCLSERQIKIWFQNRRMKWKKDNKLK 274
>gi|158702280|gb|ABW77478.1| homeobox protien HoxB5ab [Salmo salar]
Length = 276
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 60/81 (74%), Positives = 65/81 (80%), Gaps = 8/81 (9%)
Query: 228 LYPWMRSQF--------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
++PWMR + KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+E
Sbjct: 183 IFPWMRKLHISHDMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSE 242
Query: 280 RQIKIWFQNRRMKWKKENKSK 300
RQIKIWFQNRRMKWKK+NK K
Sbjct: 243 RQIKIWFQNRRMKWKKDNKLK 263
>gi|194742014|ref|XP_001953504.1| GF17790 [Drosophila ananassae]
gi|190626541|gb|EDV42065.1| GF17790 [Drosophila ananassae]
Length = 447
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/103 (63%), Positives = 73/103 (70%), Gaps = 10/103 (9%)
Query: 206 SQPPNQPPNQQPNNTSASLPSPLYPWMR----------SQFERKRGRQTYTRYQTLELEK 255
S N+ + Q + P +YPWM+ + E KR R +YTRYQTLELEK
Sbjct: 281 SDSGNEAGSSQNSGNGKKNPPQIYPWMKRVHLGQSTVNANGETKRQRTSYTRYQTLELEK 340
Query: 256 EFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
EFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE+K
Sbjct: 341 EFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHK 383
>gi|157124731|ref|XP_001660497.1| homeotic antennapedia protein, putative [Aedes aegypti]
gi|108873901|gb|EAT38126.1| AAEL009949-PA [Aedes aegypti]
Length = 370
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 61/81 (75%), Positives = 66/81 (81%), Gaps = 10/81 (12%)
Query: 228 LYPWMR----------SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 277
+YPWM+ + E KR R +YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL
Sbjct: 258 IYPWMKRVHIGQSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 317
Query: 278 TERQIKIWFQNRRMKWKKENK 298
TERQIKIWFQNRRMKWKKE+K
Sbjct: 318 TERQIKIWFQNRRMKWKKEHK 338
>gi|54607270|gb|AAL23667.2| cephalothorax [Tribolium castaneum]
Length = 312
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 61/81 (75%), Positives = 66/81 (81%), Gaps = 10/81 (12%)
Query: 228 LYPWMR----------SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 277
+YPWM+ + E KR R +YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL
Sbjct: 200 IYPWMKRVHLGQSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 259
Query: 278 TERQIKIWFQNRRMKWKKENK 298
TERQIKIWFQNRRMKWKKE+K
Sbjct: 260 TERQIKIWFQNRRMKWKKEHK 280
>gi|165873675|gb|ABY67962.1| antennapedia hox protein [Capitella teleta]
Length = 104
Score = 133 bits (334), Expect = 1e-28, Method: Composition-based stats.
Identities = 61/62 (98%), Positives = 62/62 (100%)
Query: 237 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE
Sbjct: 27 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 86
Query: 297 NK 298
N+
Sbjct: 87 NR 88
>gi|301762932|ref|XP_002916868.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-B5-like
[Ailuropoda melanoleuca]
Length = 268
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/94 (68%), Positives = 70/94 (74%), Gaps = 9/94 (9%)
Query: 228 LYPWMRSQF--------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
++PWMR + KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+E
Sbjct: 175 IFPWMRKLHISHDMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSE 234
Query: 280 RQIKIWFQNRRMKWKKENKSKDGG-SDAGSDITP 312
RQIKIWFQNRRMKWKK+NK K + AGS P
Sbjct: 235 RQIKIWFQNRRMKWKKDNKLKSMSLATAGSAFQP 268
>gi|47228655|emb|CAG07387.1| unnamed protein product [Tetraodon nigroviridis]
Length = 467
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/101 (64%), Positives = 72/101 (71%), Gaps = 18/101 (17%)
Query: 227 PLYPWMRSQ---------FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 277
P+YPWM+ +R+RGRQ Y+RYQTLELEKEFHFNRYLTRRRRIEIA+ALCL
Sbjct: 351 PIYPWMQRMNSHSGVGYGTDRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCL 410
Query: 278 TERQIKIWFQNRRMKWKKE---------NKSKDGGSDAGSD 309
TERQIKIWFQNRRMKWKKE N+ G D G D
Sbjct: 411 TERQIKIWFQNRRMKWKKESNLTSTVTGNEQTGGSQDEGED 451
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 50/60 (83%), Positives = 56/60 (93%)
Query: 238 RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 297
R+ GRQTY+RYQTLELEKEF FN YLTR+RRIE++HAL LTERQ+KIWFQNRRMKWKKEN
Sbjct: 186 RRNGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALSLTERQVKIWFQNRRMKWKKEN 245
>gi|170029593|ref|XP_001842676.1| homeotic antennapedia protein [Culex quinquefasciatus]
gi|167863995|gb|EDS27378.1| homeotic antennapedia protein [Culex quinquefasciatus]
Length = 375
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 61/81 (75%), Positives = 66/81 (81%), Gaps = 10/81 (12%)
Query: 228 LYPWMR----------SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 277
+YPWM+ + E KR R +YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL
Sbjct: 263 IYPWMKRVHIGQSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 322
Query: 278 TERQIKIWFQNRRMKWKKENK 298
TERQIKIWFQNRRMKWKKE+K
Sbjct: 323 TERQIKIWFQNRRMKWKKEHK 343
>gi|154183844|gb|ABS70783.1| Hoxb5b [Haplochromis burtoni]
Length = 293
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 60/81 (74%), Positives = 65/81 (80%), Gaps = 8/81 (9%)
Query: 228 LYPWMRSQF--------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
++PWMR + KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+E
Sbjct: 200 IFPWMRKLHISHDMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSE 259
Query: 280 RQIKIWFQNRRMKWKKENKSK 300
RQIKIWFQNRRMKWKK+NK K
Sbjct: 260 RQIKIWFQNRRMKWKKDNKLK 280
>gi|158702240|gb|ABW77451.1| homeobox protein HoxA7ab [Salmo salar]
Length = 253
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 60/72 (83%), Positives = 65/72 (90%), Gaps = 1/72 (1%)
Query: 228 LYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWMR+ RKRGRQTY RYQTLELEKEFHFNRYL RRRR+EIAH LCLTERQIKIWF
Sbjct: 116 MYPWMRTSDPNRKRGRQTYPRYQTLELEKEFHFNRYLNRRRRVEIAHVLCLTERQIKIWF 175
Query: 287 QNRRMKWKKENK 298
QNRRMKWKK++K
Sbjct: 176 QNRRMKWKKDHK 187
>gi|158702268|gb|ABW77467.1| homeobox protein HoxB5aa [Salmo salar]
Length = 276
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 60/81 (74%), Positives = 65/81 (80%), Gaps = 8/81 (9%)
Query: 228 LYPWMRSQF--------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
++PWMR + KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+E
Sbjct: 183 IFPWMRKLHISHDMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSE 242
Query: 280 RQIKIWFQNRRMKWKKENKSK 300
RQIKIWFQNRRMKWKK+NK K
Sbjct: 243 RQIKIWFQNRRMKWKKDNKLK 263
>gi|348522365|ref|XP_003448695.1| PREDICTED: homeobox protein Hox-B5b-like [Oreochromis niloticus]
Length = 293
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 60/81 (74%), Positives = 65/81 (80%), Gaps = 8/81 (9%)
Query: 228 LYPWMRSQF--------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
++PWMR + KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+E
Sbjct: 200 IFPWMRKLHISHDMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSE 259
Query: 280 RQIKIWFQNRRMKWKKENKSK 300
RQIKIWFQNRRMKWKK+NK K
Sbjct: 260 RQIKIWFQNRRMKWKKDNKLK 280
>gi|49457548|emb|CAG47073.1| HOXA5 [Homo sapiens]
Length = 270
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 61/82 (74%), Positives = 64/82 (78%), Gaps = 9/82 (10%)
Query: 228 LYPWMRSQF---------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWMR E KR R YTRYQTLELEKEFHFN YLTRRRRIEIAHALCL+
Sbjct: 176 IYPWMRKLHISHDNIGGPEGKRARTAYTRYQTLELEKEFHFNHYLTRRRRIEIAHALCLS 235
Query: 279 ERQIKIWFQNRRMKWKKENKSK 300
ERQIKIWFQNRRMKWKK+NK K
Sbjct: 236 ERQIKIWFQNRRMKWKKDNKLK 257
>gi|391329251|ref|XP_003739089.1| PREDICTED: uncharacterized protein LOC100908539 [Metaseiulus
occidentalis]
Length = 1486
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 58/69 (84%), Positives = 62/69 (89%)
Query: 238 RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 297
R+RGRQTYTRYQTLELEKEFHFN YLTRRRRIEIAHALCLTERQIKIWFQNRRMK KKE
Sbjct: 1279 RRRGRQTYTRYQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKET 1338
Query: 298 KSKDGGSDA 306
++ G D+
Sbjct: 1339 RAAKDGDDS 1347
>gi|332692489|gb|AEE90169.1| Homeobox B5a [Anguilla anguilla]
gi|385654480|gb|AFI61981.1| Hox-B5a [Anguilla japonica]
Length = 279
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/94 (68%), Positives = 70/94 (74%), Gaps = 9/94 (9%)
Query: 228 LYPWMRSQF--------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
++PWMR + KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+E
Sbjct: 186 IFPWMRKLHISHDMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSE 245
Query: 280 RQIKIWFQNRRMKWKKENKSKDGG-SDAGSDITP 312
RQIKIWFQNRRMKWKK+NK K + AGS P
Sbjct: 246 RQIKIWFQNRRMKWKKDNKLKSMSLATAGSAFQP 279
>gi|294610346|dbj|BAJ05331.1| homeotic protein Sex combs reduced [Daphnia magna]
Length = 444
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 59/81 (72%), Positives = 66/81 (81%), Gaps = 10/81 (12%)
Query: 228 LYPWMR----------SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 277
+YPWM+ + E KR R +YTRYQTLELEKEFHFNRYLTRRRRIEIAH+LCL
Sbjct: 330 IYPWMKRVHLGQNAVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHSLCL 389
Query: 278 TERQIKIWFQNRRMKWKKENK 298
+ERQIKIWFQNRRMKWKKE+K
Sbjct: 390 SERQIKIWFQNRRMKWKKEHK 410
>gi|3598844|gb|AAC35931.1| antennapedia [Archegozetes longisetosus]
Length = 63
Score = 133 bits (334), Expect = 1e-28, Method: Composition-based stats.
Identities = 59/63 (93%), Positives = 62/63 (98%)
Query: 238 RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 297
RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE
Sbjct: 1 RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEI 60
Query: 298 KSK 300
+++
Sbjct: 61 RTR 63
>gi|155369752|ref|NP_001094494.1| homeobox B5 [Xenopus (Silurana) tropicalis]
gi|140832837|gb|AAI35706.1| hoxb5 protein [Xenopus (Silurana) tropicalis]
Length = 258
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 62/89 (69%), Positives = 67/89 (75%), Gaps = 8/89 (8%)
Query: 228 LYPWMRSQF--------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
++PWMR + KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+E
Sbjct: 165 IFPWMRKLHINHDMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSE 224
Query: 280 RQIKIWFQNRRMKWKKENKSKDGGSDAGS 308
RQIKIWFQNRRMKWKK+NK K GS
Sbjct: 225 RQIKIWFQNRRMKWKKDNKLKSMSLATGS 253
>gi|159162421|pdb|1HOM|A Chain A, Determination Of The Three-Dimensional Structure Of The
Antennapedia Homeodomain From Drosophila In Solution By
1h Nuclear Magnetic Resonance Spectroscopy
Length = 68
Score = 132 bits (333), Expect = 1e-28, Method: Composition-based stats.
Identities = 62/63 (98%), Positives = 63/63 (100%)
Query: 238 RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 297
RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN
Sbjct: 2 RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 61
Query: 298 KSK 300
K+K
Sbjct: 62 KTK 64
>gi|213514426|ref|NP_001133007.1| homeobox protein HoxC6ab [Salmo salar]
gi|157815960|gb|ABV81999.1| homeobox protein HoxC6ab [Salmo salar]
gi|158702336|gb|ABW77526.1| homeobox protein HoxC6ab [Salmo salar]
Length = 228
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/96 (66%), Positives = 73/96 (76%), Gaps = 11/96 (11%)
Query: 228 LYPWMRSQ---------FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWM+ +R+RGRQ Y+RYQTLELEKEFHFNRYLTRRRRIEIA+ALCLT
Sbjct: 123 IYPWMQRMNSHSGVGFGSDRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLT 182
Query: 279 ERQIKIWFQNRRMKWKKENKSKDGGSDAGSDITPAT 314
ERQIKIWFQNRRMKWKKE S + GS+ T A+
Sbjct: 183 ERQIKIWFQNRRMKWKKE--SILTSTVTGSESTGAS 216
>gi|213512000|ref|NP_001135145.1| homeobox protein HoxB5aa [Salmo salar]
gi|157816089|gb|ABV82063.1| homeobox protein HoxB5aa [Salmo salar]
Length = 276
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 60/81 (74%), Positives = 65/81 (80%), Gaps = 8/81 (9%)
Query: 228 LYPWMRSQF--------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
++PWMR + KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+E
Sbjct: 183 IFPWMRKLHISHDMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSE 242
Query: 280 RQIKIWFQNRRMKWKKENKSK 300
RQIKIWFQNRRMKWKK+NK K
Sbjct: 243 RQIKIWFQNRRMKWKKDNKLK 263
>gi|332692499|gb|AEE90178.1| Homeobox B5b [Anguilla anguilla]
gi|385654492|gb|AFI61991.1| Hox-B5b [Anguilla japonica]
Length = 275
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/94 (68%), Positives = 70/94 (74%), Gaps = 9/94 (9%)
Query: 228 LYPWMRSQF--------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
++PWMR + KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+E
Sbjct: 182 IFPWMRKLHINHDMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSE 241
Query: 280 RQIKIWFQNRRMKWKKENKSKDGG-SDAGSDITP 312
RQIKIWFQNRRMKWKK+NK K + AGS P
Sbjct: 242 RQIKIWFQNRRMKWKKDNKLKSMSLATAGSAFQP 275
>gi|410934529|gb|AFV93981.1| homeodomain-containing protein Hox5, partial [Branchiostoma
lanceolatum]
Length = 116
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/83 (77%), Positives = 66/83 (79%), Gaps = 8/83 (9%)
Query: 227 PLYPWMRS--------QFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
P+YPWMR + KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT
Sbjct: 5 PMYPWMRKIHLNHSAGTGDNKRTRTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 64
Query: 279 ERQIKIWFQNRRMKWKKENKSKD 301
ERQIKIWFQNRRMKWKKENK K
Sbjct: 65 ERQIKIWFQNRRMKWKKENKLKS 87
>gi|301128887|emb|CBL59350.1| HoxB5 [Scyliorhinus canicula]
Length = 261
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/115 (59%), Positives = 76/115 (66%), Gaps = 20/115 (17%)
Query: 203 QPPSQPPNQPPNQQPNNTSASLPSPLYPWMRSQF---------ERKRGRQTYTRYQTLEL 253
Q P+Q P QQP ++PWMR + KR R YTR+QTLEL
Sbjct: 153 QEPAQATT--PEQQPQ---------IFPWMRKLHIGHDGMGGPDGKRARTAYTRFQTLEL 201
Query: 254 EKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSKDGGSDAGS 308
EKEFHFNRYLTRRRRIEIAHALCL+ERQIKIWFQNRRMKWKK+NK K AG+
Sbjct: 202 EKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNKLKSMSMTAGA 256
>gi|195344079|ref|XP_002038616.1| GM10524 [Drosophila sechellia]
gi|194133637|gb|EDW55153.1| GM10524 [Drosophila sechellia]
Length = 525
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/103 (63%), Positives = 73/103 (70%), Gaps = 10/103 (9%)
Query: 206 SQPPNQPPNQQPNNTSASLPSPLYPWMR----------SQFERKRGRQTYTRYQTLELEK 255
S N+ + Q + P +YPWM+ + E KR R +YTRYQTLELEK
Sbjct: 331 SDSGNEAGSSQNSGNGKKNPPQIYPWMKRVHLGTSTVNANGETKRQRTSYTRYQTLELEK 390
Query: 256 EFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
EFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE+K
Sbjct: 391 EFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHK 433
>gi|295393193|gb|ADG03457.1| LD21370p [Drosophila melanogaster]
Length = 276
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/103 (63%), Positives = 73/103 (70%), Gaps = 10/103 (9%)
Query: 206 SQPPNQPPNQQPNNTSASLPSPLYPWMR----------SQFERKRGRQTYTRYQTLELEK 255
S N+ + Q + P +YPWM+ + E KR R +YTRYQTLELEK
Sbjct: 141 SDSGNEAGSSQNSGNGKKNPPQIYPWMKRVHLGTSTVNANGETKRQRTSYTRYQTLELEK 200
Query: 256 EFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
EFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE+K
Sbjct: 201 EFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHK 243
>gi|156934|gb|AAA28373.1| Antennepedia protein, partial [Drosophila melanogaster]
Length = 74
Score = 132 bits (332), Expect = 2e-28, Method: Composition-based stats.
Identities = 63/64 (98%), Positives = 64/64 (100%)
Query: 237 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE
Sbjct: 7 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 66
Query: 297 NKSK 300
NK+K
Sbjct: 67 NKTK 70
>gi|224456|prf||1105304A homeo box gene
Length = 119
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/81 (76%), Positives = 67/81 (82%), Gaps = 1/81 (1%)
Query: 237 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
+RKRGRQTYTRYQTLELEKEFHFNRYLTRRR +EIAHALCLTERQIKIWFQNRRMKWKKE
Sbjct: 18 DRKRGRQTYTRYQTLELEKEFHFNRYLTRRRTLEIAHALCLTERQIKIWFQNRRMKWKKE 77
Query: 297 NKSKDGGSDAG-SDITPATSP 316
+K + A D P+ S
Sbjct: 78 HKDESQAPTAAPEDAVPSVST 98
>gi|213513916|ref|NP_001135094.1| homeobox protein HoxC6bb [Salmo salar]
gi|157815997|gb|ABV82017.1| homeobox protein HoxC6bb [Salmo salar]
gi|158702358|gb|ABW77546.1| homeobox protein HoxC6bb [Salmo salar]
Length = 232
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/113 (57%), Positives = 77/113 (68%), Gaps = 15/113 (13%)
Query: 205 PSQPPNQPPNQQPNNTSASLPSPLYPWMRSQ---------FERKRGRQTYTRYQTLELEK 255
PS P +Q N +YPWM+ +R+RGRQ Y+RYQTLELEK
Sbjct: 105 PSDPGRNGSQEQKGNI------QIYPWMQRMNSHSGVGYGSDRRRGRQIYSRYQTLELEK 158
Query: 256 EFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSKDGGSDAGS 308
EFHFNRYLTRRRRIEIA+ALCL+ERQIKIWFQNRRMKWKKE+ +++GS
Sbjct: 159 EFHFNRYLTRRRRIEIANALCLSERQIKIWFQNRRMKWKKESNLTSTLAESGS 211
>gi|385654458|gb|AFI61962.1| Hox-A5a [Anguilla japonica]
Length = 270
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/83 (73%), Positives = 64/83 (77%), Gaps = 9/83 (10%)
Query: 228 LYPWMRSQF---------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWMR E KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAH LCL+
Sbjct: 176 IYPWMRKLHISHDSMAGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHTLCLS 235
Query: 279 ERQIKIWFQNRRMKWKKENKSKD 301
ERQIKIWFQNRRMKWKK+NK K
Sbjct: 236 ERQIKIWFQNRRMKWKKDNKLKS 258
>gi|321475844|gb|EFX86806.1| LOW QUALITY PROTEIN: putative homeotic Sex combs reduced protein
[Daphnia pulex]
Length = 440
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 59/81 (72%), Positives = 66/81 (81%), Gaps = 10/81 (12%)
Query: 228 LYPWMR----------SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 277
+YPWM+ + E KR R +YTRYQTLELEKEFHFNRYLTRRRRIEIAH+LCL
Sbjct: 326 IYPWMKRVHLGQNAVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHSLCL 385
Query: 278 TERQIKIWFQNRRMKWKKENK 298
+ERQIKIWFQNRRMKWKKE+K
Sbjct: 386 SERQIKIWFQNRRMKWKKEHK 406
>gi|312125839|gb|ADQ27863.1| fushi tarazu [Callosobruchus maculatus]
Length = 368
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 78/117 (66%), Gaps = 5/117 (4%)
Query: 187 PQHHQVVVNHQQTPPNQPPSQPPNQPPNQQPNNTSASLPSPLYPWMRSQFE-----RKRG 241
P ++V ++ ++ S + ++ + + + YPWMRS + KR
Sbjct: 166 PADYEVHASNMSLDCDEDLSSCGKEKTSEAAEDALTAAQNNFYPWMRSSNDHTAKGNKRT 225
Query: 242 RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
RQTYTRYQTLELEKEFHFN+YLTRRRRIEIAH LCLTERQIKIWFQNRRMK KK +K
Sbjct: 226 RQTYTRYQTLELEKEFHFNKYLTRRRRIEIAHTLCLTERQIKIWFQNRRMKAKKGDK 282
>gi|449491436|ref|XP_004174235.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-B6
[Taeniopygia guttata]
Length = 177
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 58/60 (96%), Positives = 60/60 (100%)
Query: 239 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
+RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAH+LCLTERQIKIWFQNRRMKWKKENK
Sbjct: 100 RRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHSLCLTERQIKIWFQNRRMKWKKENK 159
>gi|332692471|gb|AEE90153.1| Homeobox A5a [Anguilla anguilla]
Length = 270
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/82 (74%), Positives = 64/82 (78%), Gaps = 9/82 (10%)
Query: 228 LYPWMRSQF---------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWMR E KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAH LCL+
Sbjct: 176 IYPWMRKLHISHDSMAGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHTLCLS 235
Query: 279 ERQIKIWFQNRRMKWKKENKSK 300
ERQIKIWFQNRRMKWKK+NK K
Sbjct: 236 ERQIKIWFQNRRMKWKKDNKLK 257
>gi|354479686|ref|XP_003502040.1| PREDICTED: homeobox protein Hox-A5-like [Cricetulus griseus]
Length = 169
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/102 (62%), Positives = 69/102 (67%), Gaps = 9/102 (8%)
Query: 208 PPNQPPNQQPNNTSASLPSPLYPWMRSQF---------ERKRGRQTYTRYQTLELEKEFH 258
Q Q + + +YPWMR E KR R YTRYQTLELEKEFH
Sbjct: 55 SSEQASAQSEPSPAPPAQPQIYPWMRKLHISHDNIGGPEGKRARTAYTRYQTLELEKEFH 114
Query: 259 FNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSK 300
FNRYLTRRRRIEIAHALCL+ERQIKIWFQNRRMKWKK+NK K
Sbjct: 115 FNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNKLK 156
>gi|397911066|gb|AFO68809.1| homeodomain-containing protein Hox6, partial [Branchiostoma
lanceolatum]
Length = 215
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/79 (78%), Positives = 66/79 (83%), Gaps = 7/79 (8%)
Query: 227 PLYPWMRSQF-------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
P+ PWMR E+KRGRQTYTRYQTLELEKEFHFN+YLTR+RRIEIAH L LTE
Sbjct: 109 PVSPWMRKGSSQTAMGEEKKRGRQTYTRYQTLELEKEFHFNKYLTRKRRIEIAHLLGLTE 168
Query: 280 RQIKIWFQNRRMKWKKENK 298
RQIKIWFQNRRMKWKKENK
Sbjct: 169 RQIKIWFQNRRMKWKKENK 187
>gi|112983646|ref|NP_001037339.1| sex combs reduced homolog [Bombyx mori]
gi|4589701|dbj|BAA76868.1| Scr [Bombyx mori]
Length = 356
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/81 (75%), Positives = 66/81 (81%), Gaps = 10/81 (12%)
Query: 228 LYPWMR----------SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 277
+YPWM+ + E KR R +YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL
Sbjct: 244 IYPWMKRVHLGQSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 303
Query: 278 TERQIKIWFQNRRMKWKKENK 298
TERQIKIWFQNRRMKWKKE+K
Sbjct: 304 TERQIKIWFQNRRMKWKKEHK 324
>gi|238822187|gb|ACR58763.1| sex combs reduced [Onthophagus sagittarius]
Length = 298
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/81 (74%), Positives = 65/81 (80%), Gaps = 10/81 (12%)
Query: 228 LYPWMR----------SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 277
+YPWM+ + KR R +YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL
Sbjct: 207 IYPWMKRVHLGQSTVNANGGTKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 266
Query: 278 TERQIKIWFQNRRMKWKKENK 298
TERQIKIWFQNRRMKWKKE+K
Sbjct: 267 TERQIKIWFQNRRMKWKKEHK 287
>gi|158023|gb|AAA28737.1| homeobox protein [Drosophila virilis]
Length = 82
Score = 132 bits (332), Expect = 2e-28, Method: Composition-based stats.
Identities = 70/82 (85%), Positives = 72/82 (87%), Gaps = 2/82 (2%)
Query: 238 RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 297
RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN
Sbjct: 1 RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 60
Query: 298 KSKD--GGSDAGSDITPATSPQ 317
K+K G G +ITP SPQ
Sbjct: 61 KTKGEPGSGGEGDEITPPNSPQ 82
>gi|363746032|ref|XP_003643502.1| PREDICTED: homeobox protein Hox-C6-like [Gallus gallus]
Length = 237
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 59/79 (74%), Positives = 66/79 (83%), Gaps = 9/79 (11%)
Query: 228 LYPWMRSQ---------FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWM+ +R+RGRQ Y+RYQTLELEKEFHFNRYLTRRRRIEIA+ALCLT
Sbjct: 122 IYPWMQRMNSHSGVGYGADRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLT 181
Query: 279 ERQIKIWFQNRRMKWKKEN 297
ERQIKIWFQNRRMKWKKE+
Sbjct: 182 ERQIKIWFQNRRMKWKKES 200
>gi|332692512|gb|AEE90189.1| Homeobox C6a [Anguilla anguilla]
gi|385654505|gb|AFI62002.1| Hox-C6a [Anguilla japonica]
Length = 233
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 59/79 (74%), Positives = 66/79 (83%), Gaps = 9/79 (11%)
Query: 228 LYPWMRSQ---------FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWM+ +R+RGRQ Y+RYQTLELEKEFHFNRYLTRRRRIEIA+ALCLT
Sbjct: 122 IYPWMQRMNSHSGVGYGSDRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLT 181
Query: 279 ERQIKIWFQNRRMKWKKEN 297
ERQIKIWFQNRRMKWKKE+
Sbjct: 182 ERQIKIWFQNRRMKWKKES 200
>gi|2708301|gb|AAB92411.1| sex combs reduced [Acanthokara kaputensis]
Length = 120
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/79 (78%), Positives = 65/79 (82%), Gaps = 8/79 (10%)
Query: 228 LYPWMRSQ--------FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
+YPWMR E KR R +YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE
Sbjct: 22 IYPWMRRAHVGQSLNGMEAKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 81
Query: 280 RQIKIWFQNRRMKWKKENK 298
RQIKIWFQNRRMKWKKE+K
Sbjct: 82 RQIKIWFQNRRMKWKKEHK 100
>gi|1334649|emb|CAA30122.1| unnamed protein product [Xenopus laevis]
Length = 114
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 63/94 (67%), Positives = 72/94 (76%), Gaps = 12/94 (12%)
Query: 228 LYPWMRSQ---------FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWM+ +R+RGRQ Y+RYQTLELEKEFHFNRYLTRRRRIEIA+ALCLT
Sbjct: 2 IYPWMQRMNSHSGVGYGTDRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLT 61
Query: 279 ERQIKIWFQNRRMKWKKENKSKD---GGSDAGSD 309
ERQIKIWFQNRRMKWKKE+ GG+ A +D
Sbjct: 62 ERQIKIWFQNRRMKWKKESNLSSTLPGGTGAAAD 95
>gi|193935|gb|AAA37845.1| homeobox mh22b-related protein, partial [Mus musculus]
Length = 112
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/70 (85%), Positives = 64/70 (91%)
Query: 237 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
+RKRGRQTYTRYQTLELEKEFH+NRYLTRRRRIEIAH LCLTERQIKIWFQNRRMKWKKE
Sbjct: 31 DRKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHTLCLTERQIKIWFQNRRMKWKKE 90
Query: 297 NKSKDGGSDA 306
NK+ G+
Sbjct: 91 NKTSGPGTTG 100
>gi|220898207|gb|ACL81461.1| HoxC6 [Latimeria menadoensis]
Length = 233
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 66/128 (51%), Positives = 83/128 (64%), Gaps = 14/128 (10%)
Query: 186 PPQHHQVVVNHQQTPPNQPPSQPPNQPPNQQPNNTSASLPSPLYPWMRSQ---------F 236
P ++++ QT Q + ++ Q+ +T +YPWM+
Sbjct: 85 PSCRQNTMIHNTQTSIAQEFNSDHSRTSTQEQKSTV-----QIYPWMQRMNSHSGVGYGA 139
Query: 237 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
+R+RGRQ Y+RYQTLELEKEFHFNRYLTRRRRIEIA+ALCLTERQIKIWFQNRRMKWKKE
Sbjct: 140 DRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 199
Query: 297 NKSKDGGS 304
+ + S
Sbjct: 200 SNTTSSLS 207
>gi|62526089|dbj|BAD95561.1| Hoxb-5 [Pelodiscus sinensis]
Length = 256
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 59/81 (72%), Positives = 65/81 (80%), Gaps = 8/81 (9%)
Query: 228 LYPWMRSQF--------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
++PWMR + KR R YTRY+TLELEKEFHFNRYLTRRRRIEIAHALCL+E
Sbjct: 173 IFPWMRKLHISHDMTGPDGKRARTAYTRYRTLELEKEFHFNRYLTRRRRIEIAHALCLSE 232
Query: 280 RQIKIWFQNRRMKWKKENKSK 300
RQIKIWFQNRRMKWKK+NK K
Sbjct: 233 RQIKIWFQNRRMKWKKDNKLK 253
>gi|301607693|ref|XP_002933441.1| PREDICTED: homeobox protein Hox-A9-like [Xenopus (Silurana)
tropicalis]
Length = 487
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 63/88 (71%), Positives = 69/88 (78%), Gaps = 9/88 (10%)
Query: 220 TSASLPSPLYPWMRSQFER---------KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIE 270
T SP+YPWM+ +RGRQTYTR+QTLELEKEFHFNRYLTRRRRIE
Sbjct: 378 TDRKYSSPVYPWMQRVNSCTGPVYGAHGRRGRQTYTRFQTLELEKEFHFNRYLTRRRRIE 437
Query: 271 IAHALCLTERQIKIWFQNRRMKWKKENK 298
IA+ALCLTERQIKIWFQNRRMKWKKE+K
Sbjct: 438 IANALCLTERQIKIWFQNRRMKWKKESK 465
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 54/55 (98%), Positives = 55/55 (100%)
Query: 237 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRM 291
+RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRM
Sbjct: 185 DRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRM 239
>gi|327275812|ref|XP_003222666.1| PREDICTED: homeobox protein Hox-B5a-like isoform 2 [Anolis
carolinensis]
Length = 287
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/82 (73%), Positives = 65/82 (79%), Gaps = 8/82 (9%)
Query: 228 LYPWMRSQF--------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
++PWMR + KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+E
Sbjct: 194 IFPWMRKLHISHDMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSE 253
Query: 280 RQIKIWFQNRRMKWKKENKSKD 301
RQIKIWFQNRRMKWKK+NK K
Sbjct: 254 RQIKIWFQNRRMKWKKDNKLKS 275
>gi|327275814|ref|XP_003222667.1| PREDICTED: homeobox protein Hox-B5a-like isoform 3 [Anolis
carolinensis]
Length = 277
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/81 (74%), Positives = 65/81 (80%), Gaps = 8/81 (9%)
Query: 228 LYPWMRSQF--------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
++PWMR + KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+E
Sbjct: 184 IFPWMRKLHISHDMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSE 243
Query: 280 RQIKIWFQNRRMKWKKENKSK 300
RQIKIWFQNRRMKWKK+NK K
Sbjct: 244 RQIKIWFQNRRMKWKKDNKLK 264
>gi|4322038|gb|AAD15929.1| homeobox protein [Petromyzon marinus]
Length = 303
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 62/89 (69%), Positives = 68/89 (76%), Gaps = 9/89 (10%)
Query: 228 LYPWMR---------SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWM+ S E KR R YTRYQTLELEKEFHFNRYLTRRRRIE+A+ALCL+
Sbjct: 208 IYPWMKKLHLNHDGISGSEGKRSRTAYTRYQTLELEKEFHFNRYLTRRRRIEVANALCLS 267
Query: 279 ERQIKIWFQNRRMKWKKENKSKDGGSDAG 307
ERQIKIWFQNRRMKWKK+NK K AG
Sbjct: 268 ERQIKIWFQNRRMKWKKDNKLKSLSMAAG 296
>gi|327275810|ref|XP_003222665.1| PREDICTED: homeobox protein Hox-B5a-like isoform 1 [Anolis
carolinensis]
Length = 278
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/81 (74%), Positives = 65/81 (80%), Gaps = 8/81 (9%)
Query: 228 LYPWMRSQF--------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
++PWMR + KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+E
Sbjct: 185 IFPWMRKLHISHDMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSE 244
Query: 280 RQIKIWFQNRRMKWKKENKSK 300
RQIKIWFQNRRMKWKK+NK K
Sbjct: 245 RQIKIWFQNRRMKWKKDNKLK 265
>gi|220898216|gb|ACL81469.1| HoxD4 [Latimeria menadoensis]
Length = 233
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/139 (52%), Positives = 87/139 (62%), Gaps = 13/139 (9%)
Query: 183 QQPPPQHHQVVVNHQQTPPNQPPSQPPNQPPNQQPNNTSASLPSPLYPWMRSQF------ 236
+Q PQ H V +P P S+ NQ N+ + T + P+ +YPWM+
Sbjct: 77 EQSGPQSHFPVQQEHCSPLPIPTSRSCNQQQNKNQSGTVSKQPAIVYPWMKKVHVNSVNP 136
Query: 237 -----ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRM 291
E KR R YTR Q LELEKEFHFNRYLTRRRRIEIAH LCL+ERQIKIWFQNRRM
Sbjct: 137 NYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRM 196
Query: 292 KWKKENK--SKDGGSDAGS 308
KWKK++K + G S +GS
Sbjct: 197 KWKKDHKLPNTKGRSSSGS 215
>gi|426228406|ref|XP_004008300.1| PREDICTED: homeobox protein Hox-A5 [Ovis aries]
Length = 199
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 62/83 (74%), Positives = 65/83 (78%), Gaps = 9/83 (10%)
Query: 228 LYPWMRSQF---------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWMR E KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+
Sbjct: 102 IYPWMRKLHISHDNIGGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLS 161
Query: 279 ERQIKIWFQNRRMKWKKENKSKD 301
ERQIKIWFQNRRMKWKK+NK K
Sbjct: 162 ERQIKIWFQNRRMKWKKDNKLKS 184
>gi|345316078|ref|XP_001518990.2| PREDICTED: homeobox protein Hox-C6-like, partial [Ornithorhynchus
anatinus]
Length = 260
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 66/129 (51%), Positives = 79/129 (61%), Gaps = 12/129 (9%)
Query: 181 YAQQPPPQHHQVVVNHQQTPPNQPPSQPPNQPPNQQPNNTSA---SLPSPLYPWMRSQ-- 235
Y Q V+ N +Q+ Q + + T+ +YPWM+
Sbjct: 114 YGSNSFYQEKDVLSNCRQSTLGHNSQNSITQDFSSEQTRTTGQDQKASIQIYPWMQRMNS 173
Query: 236 -------FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQN 288
+R+RGRQ Y+RYQTLELEKEFHFNRYLTRRRRIEIA+ALCLTERQIKIWFQN
Sbjct: 174 HSGVGYGADRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQN 233
Query: 289 RRMKWKKEN 297
RRMKWKKE+
Sbjct: 234 RRMKWKKES 242
>gi|287635|emb|CAA32637.1| unnamed protein product [Drosophila melanogaster]
Length = 415
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 65/103 (63%), Positives = 73/103 (70%), Gaps = 10/103 (9%)
Query: 206 SQPPNQPPNQQPNNTSASLPSPLYPWMR----------SQFERKRGRQTYTRYQTLELEK 255
S N+ + Q + P +YPWM+ + E KR R +YTRYQTLELEK
Sbjct: 280 SDSGNEAGSSQNSGNGKKNPPQIYPWMKRVHLGTSTVNANGETKRQRTSYTRYQTLELEK 339
Query: 256 EFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
EFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE+K
Sbjct: 340 EFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHK 382
>gi|327263838|ref|XP_003216724.1| PREDICTED: homeobox protein Hox-C6-like [Anolis carolinensis]
Length = 236
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 64/109 (58%), Positives = 76/109 (69%), Gaps = 14/109 (12%)
Query: 198 QTPPNQPPSQPPNQPPNQQPNNTSASLPSPLYPWMRSQ---------FERKRGRQTYTRY 248
QT Q + N+ +Q+ + +YPWM+ +R+RGRQ Y+RY
Sbjct: 97 QTSIAQDFTSDQNRSTSQEQKTSI-----QIYPWMQRMNSHSGVGYGADRRRGRQIYSRY 151
Query: 249 QTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 297
QTLELEKEFHFNRYLTRRRRIEIA+ALCLTERQIKIWFQNRRMKWKKE+
Sbjct: 152 QTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKES 200
>gi|64116|emb|CAA34745.1| NuHox-1 protein C-terminal fragment (104 AA) [Notophthalmus
viridescens]
Length = 104
Score = 131 bits (330), Expect = 3e-28, Method: Composition-based stats.
Identities = 59/76 (77%), Positives = 66/76 (86%), Gaps = 3/76 (3%)
Query: 237 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
+R+RGRQ Y+RYQTLELEKEFHFNRYLTRRRRIEIA+A CLTERQIKIWFQNRRMKWKKE
Sbjct: 10 DRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANASCLTERQIKIWFQNRRMKWKKE 69
Query: 297 NK---SKDGGSDAGSD 309
+ + GG+ A SD
Sbjct: 70 SNLTSTLSGGTGAASD 85
>gi|505633|gb|AAA19240.1| sex combs reduced homeodomain protein [Drosophila melanogaster]
Length = 415
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 64/103 (62%), Positives = 73/103 (70%), Gaps = 10/103 (9%)
Query: 206 SQPPNQPPNQQPNNTSASLPSPLYPWMR----------SQFERKRGRQTYTRYQTLELEK 255
S N+ + Q + P +YPWM+ + E KR R +YTRYQTLELEK
Sbjct: 280 SDSGNEAGSSQNSGNGKKNPPQIYPWMKRVHLGTSTVNANGETKRQRTSYTRYQTLELEK 339
Query: 256 EFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
EFHFNRYLTRRRRIEIAHALCLTERQIKIWFQ+RRMKWKKE+K
Sbjct: 340 EFHFNRYLTRRRRIEIAHALCLTERQIKIWFQDRRMKWKKEHK 382
>gi|383849764|ref|XP_003700507.1| PREDICTED: uncharacterized protein LOC100875892 [Megachile
rotundata]
Length = 375
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 62/95 (65%), Positives = 70/95 (73%), Gaps = 8/95 (8%)
Query: 229 YPWMRSQFE--------RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTER 280
YPWM+S + +KR RQTYTR+QTLELEKEFHFNRYLTRRRRIEIA ALCLTER
Sbjct: 200 YPWMKSSYANGDTNGAGQKRTRQTYTRFQTLELEKEFHFNRYLTRRRRIEIAQALCLTER 259
Query: 281 QIKIWFQNRRMKWKKENKSKDGGSDAGSDITPATS 315
QIKIWFQNRRMK KK+ K G + + +TS
Sbjct: 260 QIKIWFQNRRMKAKKDGKLSYNGVETNMEDIASTS 294
>gi|395835047|ref|XP_003790496.1| PREDICTED: homeobox protein Hox-C6 [Otolemur garnettii]
Length = 235
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 59/79 (74%), Positives = 66/79 (83%), Gaps = 9/79 (11%)
Query: 228 LYPWMRSQ---------FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWM+ +R+RGRQ Y+RYQTLELEKEFHFNRYLTRRRRIEIA+ALCLT
Sbjct: 122 IYPWMQRMNSHSGVGYGADRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLT 181
Query: 279 ERQIKIWFQNRRMKWKKEN 297
ERQIKIWFQNRRMKWKKE+
Sbjct: 182 ERQIKIWFQNRRMKWKKES 200
>gi|123297|sp|P09019.1|HXB5_XENLA RecName: Full=Homeobox protein Hox-B5; AltName: Full=Xhox-1B;
AltName: Full=XlHbox-4
gi|1334652|emb|CAA30125.1| unnamed protein product [Xenopus laevis]
Length = 230
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 61/89 (68%), Positives = 66/89 (74%), Gaps = 8/89 (8%)
Query: 228 LYPWMRSQF--------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
++PWMR + KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAH LCL+E
Sbjct: 137 IFPWMRKLHINHDMAGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHTLCLSE 196
Query: 280 RQIKIWFQNRRMKWKKENKSKDGGSDAGS 308
RQIKIWFQNRRMKWKK+NK K GS
Sbjct: 197 RQIKIWFQNRRMKWKKDNKLKSMSLATGS 225
>gi|301128884|emb|CBL59347.1| HoxB8 [Scyliorhinus canicula]
Length = 234
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 65/103 (63%), Positives = 79/103 (76%), Gaps = 3/103 (2%)
Query: 210 NQPPNQQPNNTSASLPSPLYPWMRSQFE--RKRGRQTYTRYQTLELEKEFHFNRYLTRRR 267
N + N+ +S P+ L+PWMR Q R+RGRQTY+RYQTLELEKEF FN YLTR+R
Sbjct: 117 NSLGEEAENSEQSSSPTQLFPWMRPQVAAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKR 176
Query: 268 RIEIAHALCLTERQIKIWFQNRRMKWKKENKSKDGGSDAGSDI 310
RIE++HAL LTERQ+KIWFQNRRMKWKKEN +KD + S+I
Sbjct: 177 RIEVSHALGLTERQVKIWFQNRRMKWKKEN-NKDKFPSSKSEI 218
>gi|213513736|ref|NP_001135093.1| homeobox protein HoxC5ba [Salmo salar]
gi|157815982|gb|ABV82010.1| homeobox protein HoxC5ba [Salmo salar]
gi|158702349|gb|ABW77538.1| homeobox protein HoxC5ba [Salmo salar]
Length = 249
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 74/155 (47%), Positives = 91/155 (58%), Gaps = 19/155 (12%)
Query: 165 HPQQQQPQQPPPQHMMYAQQPP--PQHHQVVVNHQQTPPNQPPSQPPNQPPNQQPNNTS- 221
H +Q +Q +Y ++P ++ + QT + + P QP Q N+T
Sbjct: 90 HMNEQTSRQGSLNLGLYCRKPETDSDFSEMHICKTQTGEIKVVTLQPVQPVRQGNNSTQP 149
Query: 222 -ASLPSP-LYPWMRS--------------QFERKRGRQTYTRYQTLELEKEFHFNRYLTR 265
S P P +YPWM + + KR R +YTRYQTLELEKEFHFNRYLTR
Sbjct: 150 QTSEPQPQIYPWMTKLHMGHDYFSLNYTPEADGKRSRTSYTRYQTLELEKEFHFNRYLTR 209
Query: 266 RRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSK 300
RRRIEIAH LCL ERQIKIWFQNRRMKWKK++K K
Sbjct: 210 RRRIEIAHTLCLNERQIKIWFQNRRMKWKKDSKLK 244
>gi|449477637|ref|XP_002188517.2| PREDICTED: homeobox protein Hox-C6-like, partial [Taeniopygia
guttata]
Length = 212
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 59/78 (75%), Positives = 65/78 (83%), Gaps = 9/78 (11%)
Query: 228 LYPWMRSQ---------FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWM+ +R+RGRQ Y+RYQTLELEKEFHFNRYLTRRRRIEIA+ALCLT
Sbjct: 124 IYPWMQRMNSHSGVGYGADRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLT 183
Query: 279 ERQIKIWFQNRRMKWKKE 296
ERQIKIWFQNRRMKWKKE
Sbjct: 184 ERQIKIWFQNRRMKWKKE 201
>gi|328778440|ref|XP_623903.2| PREDICTED: homeotic protein Sex combs reduced [Apis mellifera]
Length = 380
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 61/84 (72%), Positives = 66/84 (78%), Gaps = 10/84 (11%)
Query: 225 PSPLYPWMR----------SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHA 274
P +Y WM+ + E KR R +YTRYQTLELEKEFHFNRYLTRRRRIEIAHA
Sbjct: 265 PPKIYSWMKRVHIGQSTVNANGEVKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHA 324
Query: 275 LCLTERQIKIWFQNRRMKWKKENK 298
LCLTERQIKIWFQNRRMKWKKE+K
Sbjct: 325 LCLTERQIKIWFQNRRMKWKKEHK 348
>gi|110282969|sp|Q9YGT6.2|HXA5A_DANRE RecName: Full=Homeobox protein Hox-A5a
Length = 265
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 61/83 (73%), Positives = 64/83 (77%), Gaps = 9/83 (10%)
Query: 228 LYPWMRSQF---------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWMR E KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAH LCL+
Sbjct: 171 IYPWMRKLHISHDNLAGPEGKRPRTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHTLCLS 230
Query: 279 ERQIKIWFQNRRMKWKKENKSKD 301
ERQIKIWFQNRRMKWKK+NK K
Sbjct: 231 ERQIKIWFQNRRMKWKKDNKLKS 253
>gi|429510504|gb|AFZ94990.1| transcription factor Hox5 [Petromyzon marinus]
Length = 325
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 58/65 (89%), Positives = 59/65 (90%)
Query: 237 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
E KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKK+
Sbjct: 249 EGKRSRTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKD 308
Query: 297 NKSKD 301
NK K
Sbjct: 309 NKLKS 313
>gi|255742464|gb|ACU32577.1| homeobox protein HoxC6 [Callorhinchus milii]
Length = 219
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 63/99 (63%), Positives = 74/99 (74%), Gaps = 16/99 (16%)
Query: 227 PLYPWMRSQF---------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 277
P+YPWM+ +R+RGRQ Y+RYQTLELEKEFHFNRYLTRRRRIEIA+ALCL
Sbjct: 121 PIYPWMQRVNSHSGVGYGPDRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCL 180
Query: 278 TERQIKIWFQNRRMKWKKENK-------SKDGGSDAGSD 309
TERQIKIWFQNRRMKWKKE+ +++GG + D
Sbjct: 181 TERQIKIWFQNRRMKWKKESNPAVPPVGAQEGGEEKEKD 219
>gi|213510894|ref|NP_001135139.1| homeobox protein HoxC6ba [Salmo salar]
gi|157815980|gb|ABV82009.1| homeobox protein HoxC6ba [Salmo salar]
gi|158702348|gb|ABW77537.1| homeobox protein HoxC6ba [Salmo salar]
Length = 232
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 68/126 (53%), Positives = 80/126 (63%), Gaps = 23/126 (18%)
Query: 200 PPNQPPSQPPNQPPNQQPNNTSASLPSPLYPWMRSQ---------FERKRGRQTYTRYQT 250
P + P Q N Q+ N ++PWM+ +R+RGRQ Y+RYQT
Sbjct: 101 PQDYPSDQGRNGSQEQKGN-------IQIFPWMQRMNSHSGVGYGSDRRRGRQIYSRYQT 153
Query: 251 LELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSKDGGSDAGSDI 310
LELEKEFHFNRYLTRRRRIEIA+ALCLTERQIKIWFQNRRMKWKKE S+ S +
Sbjct: 154 LELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE-------SNLTSTL 206
Query: 311 TPATSP 316
T + S
Sbjct: 207 TESVSA 212
>gi|344266085|ref|XP_003405111.1| PREDICTED: homeobox protein Hox-C6-like [Loxodonta africana]
gi|444513899|gb|ELV10484.1| Homeobox protein Hox-C6 [Tupaia chinensis]
Length = 235
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 59/79 (74%), Positives = 66/79 (83%), Gaps = 9/79 (11%)
Query: 228 LYPWMRSQ---------FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWM+ +R+RGRQ Y+RYQTLELEKEFHFNRYLTRRRRIEIA+ALCLT
Sbjct: 122 IYPWMQRMNSHSGVGYGADRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLT 181
Query: 279 ERQIKIWFQNRRMKWKKEN 297
ERQIKIWFQNRRMKWKKE+
Sbjct: 182 ERQIKIWFQNRRMKWKKES 200
>gi|24119205|ref|NP_571615.1| homeobox protein Hox-A5a [Danio rerio]
gi|4322062|gb|AAD15940.1| homeobox protein [Danio rerio]
gi|190337204|gb|AAI62990.1| Homeo box A5a [Danio rerio]
gi|190338205|gb|AAI62975.1| Homeo box A5a [Danio rerio]
Length = 227
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 61/83 (73%), Positives = 64/83 (77%), Gaps = 9/83 (10%)
Query: 228 LYPWMRSQF---------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWMR E KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAH LCL+
Sbjct: 133 IYPWMRKLHISHDNLAGPEGKRPRTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHTLCLS 192
Query: 279 ERQIKIWFQNRRMKWKKENKSKD 301
ERQIKIWFQNRRMKWKK+NK K
Sbjct: 193 ERQIKIWFQNRRMKWKKDNKLKS 215
>gi|213982843|ref|NP_001135589.1| homeobox D8 [Xenopus (Silurana) tropicalis]
gi|195540199|gb|AAI68107.1| Unknown (protein for MGC:186068) [Xenopus (Silurana) tropicalis]
Length = 231
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 67/118 (56%), Positives = 84/118 (71%), Gaps = 5/118 (4%)
Query: 188 QHHQVVVNHQQTPPNQ-PPSQPPNQPPNQQPNNTSASLPSP-LYPWMRSQFE--RKRGRQ 243
Q + HQ+ P Q P + P+ P + + P+ ++PWMR+Q R+RGRQ
Sbjct: 85 QRQHIFTTHQEAEPVQYPDCKSPSASIGADPEHLHQNSPASHMFPWMRAQVAPGRRRGRQ 144
Query: 244 TYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSKD 301
TY+R+QTLELEKEF FN YLTR+RRIE++HAL LTERQ+KIWFQNRRMKWKKEN SKD
Sbjct: 145 TYSRFQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKEN-SKD 201
>gi|123204408|gb|ABM73547.1| homeodomain protein [Megalobrama amblycephala]
Length = 214
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 75/119 (63%), Gaps = 9/119 (7%)
Query: 192 VVVNHQQTPPNQPPSQPPNQPPNQQPNNTSASLPSPLYPWMRSQF---------ERKRGR 242
V+N + + P + Q + + S +YPWMR E KR R
Sbjct: 89 TVLNREDVSKASSIMEEEKPPGSAQTASQNVSEAPQIYPWMRKLHISHGNLAGPEGKRPR 148
Query: 243 QTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSKD 301
YTR+QTLELEKEFHFNRYLTRRRRIEIAH LCL+ERQIKIWFQNRRMKWKK+NK K
Sbjct: 149 TAYTRFQTLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDNKLKS 207
>gi|51476|emb|CAA34518.1| unnamed protein product [Mus musculus]
gi|241279|gb|AAB20717.1| homeobox protein 3.3 [Mus sp.]
Length = 235
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 59/79 (74%), Positives = 66/79 (83%), Gaps = 9/79 (11%)
Query: 228 LYPWMRSQ---------FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWM+ +R+RGRQ Y+RYQTLELEKEFHFNRYLTRRRRIEIA+ALCLT
Sbjct: 122 IYPWMQRMNSHSGVGYGADRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLT 181
Query: 279 ERQIKIWFQNRRMKWKKEN 297
ERQIKIWFQNRRMKWKKE+
Sbjct: 182 ERQIKIWFQNRRMKWKKES 200
>gi|4758554|ref|NP_004494.1| homeobox protein Hox-C6 isoform 1 [Homo sapiens]
gi|114145519|ref|NP_034595.2| homeobox protein Hox-C6 [Mus musculus]
gi|332839194|ref|XP_003313691.1| PREDICTED: homeobox protein Hox-C6 [Pan troglodytes]
gi|390467697|ref|XP_002752511.2| PREDICTED: homeobox protein Hox-C6-like [Callithrix jacchus]
gi|392341720|ref|XP_001069410.2| PREDICTED: homeobox protein Hox-C6 isoform 1 [Rattus norvegicus]
gi|392349763|ref|XP_003750463.1| PREDICTED: homeobox protein Hox-C6 [Rattus norvegicus]
gi|395744376|ref|XP_002823404.2| PREDICTED: homeobox protein Hox-C6 [Pongo abelii]
gi|397521943|ref|XP_003831042.1| PREDICTED: homeobox protein Hox-C6 [Pan paniscus]
gi|402886201|ref|XP_003906526.1| PREDICTED: homeobox protein Hox-C6 [Papio anubis]
gi|403296835|ref|XP_003939300.1| PREDICTED: homeobox protein Hox-C6 [Saimiri boliviensis
boliviensis]
gi|426372802|ref|XP_004053305.1| PREDICTED: homeobox protein Hox-C6 isoform 1 [Gorilla gorilla
gorilla]
gi|400007|sp|P10629.2|HXC6_MOUSE RecName: Full=Homeobox protein Hox-C6; AltName: Full=Homeobox
protein Hox-3.3; AltName: Full=Homeobox protein Hox-6.1
gi|115502398|sp|P09630.3|HXC6_HUMAN RecName: Full=Homeobox protein Hox-C6; AltName: Full=Homeobox
protein CP25; AltName: Full=Homeobox protein HHO.C8;
AltName: Full=Homeobox protein Hox-3C
gi|7446275|pir||S72429 homeotic protein HOX C6 (clone 211) - human
gi|1836128|gb|AAB46892.1| homeodomain-containing protein [Homo sapiens]
gi|49901568|gb|AAH74845.1| Homeobox C6 [Homo sapiens]
gi|49902099|gb|AAH74844.1| Homeobox C6 [Homo sapiens]
gi|119617153|gb|EAW96747.1| homeobox C6, isoform CRA_b [Homo sapiens]
gi|148671996|gb|EDL03943.1| homeobox C6 [Mus musculus]
gi|149031890|gb|EDL86802.1| homeo box C6 [Rattus norvegicus]
gi|187954707|gb|AAI41062.1| Homeo box C6 [Mus musculus]
gi|306921741|dbj|BAJ17950.1| homeobox C6 [synthetic construct]
gi|355564296|gb|EHH20796.1| Homeobox protein Hox-3C [Macaca mulatta]
gi|355786154|gb|EHH66337.1| Homeobox protein Hox-3C [Macaca fascicularis]
gi|410226590|gb|JAA10514.1| homeobox C6 [Pan troglodytes]
gi|410255858|gb|JAA15896.1| homeobox C6 [Pan troglodytes]
gi|410348018|gb|JAA40758.1| homeobox C6 [Pan troglodytes]
Length = 235
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 59/79 (74%), Positives = 66/79 (83%), Gaps = 9/79 (11%)
Query: 228 LYPWMRSQ---------FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWM+ +R+RGRQ Y+RYQTLELEKEFHFNRYLTRRRRIEIA+ALCLT
Sbjct: 122 IYPWMQRMNSHSGVGYGADRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLT 181
Query: 279 ERQIKIWFQNRRMKWKKEN 297
ERQIKIWFQNRRMKWKKE+
Sbjct: 182 ERQIKIWFQNRRMKWKKES 200
>gi|400180331|gb|AFP73299.1| Hoxa6alpha [Polyodon spathula]
Length = 226
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 62/82 (75%), Positives = 66/82 (80%), Gaps = 9/82 (10%)
Query: 225 PSPLYPWMRSQFER---------KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHAL 275
P +YPWM + + KRGRQTYTR+QTLELEKEFHFNRYLTRRRRIEIA AL
Sbjct: 128 PGSVYPWMMNCNGKYCSIYGSHGKRGRQTYTRHQTLELEKEFHFNRYLTRRRRIEIASAL 187
Query: 276 CLTERQIKIWFQNRRMKWKKEN 297
CLTERQIKIWFQNRRMKWKKEN
Sbjct: 188 CLTERQIKIWFQNRRMKWKKEN 209
>gi|126343889|ref|XP_001364878.1| PREDICTED: homeobox protein Hox-C6 [Monodelphis domestica]
gi|395540853|ref|XP_003772365.1| PREDICTED: homeobox protein Hox-C6 [Sarcophilus harrisii]
gi|359754108|gb|AEV59529.1| HOXC6 [Macropus eugenii]
Length = 235
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 59/79 (74%), Positives = 66/79 (83%), Gaps = 9/79 (11%)
Query: 228 LYPWMRSQ---------FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWM+ +R+RGRQ Y+RYQTLELEKEFHFNRYLTRRRRIEIA+ALCLT
Sbjct: 122 IYPWMQRMNSHSGVGYGADRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLT 181
Query: 279 ERQIKIWFQNRRMKWKKEN 297
ERQIKIWFQNRRMKWKKE+
Sbjct: 182 ERQIKIWFQNRRMKWKKES 200
>gi|355560738|gb|EHH17424.1| hypothetical protein EGK_13830 [Macaca mulatta]
Length = 230
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 60/72 (83%), Positives = 63/72 (87%), Gaps = 1/72 (1%)
Query: 228 LYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWMRS +RKRGRQTYTRYQ EFHFNRYLTRRRRIEIAHALCLTERQIKIWF
Sbjct: 119 IYPWMRSSGPDRKRGRQTYTRYQXXXXXXEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 178
Query: 287 QNRRMKWKKENK 298
QNRRMKWKKE+K
Sbjct: 179 QNRRMKWKKEHK 190
>gi|395519807|ref|XP_003764033.1| PREDICTED: homeobox protein Hox-D4 [Sarcophilus harrisii]
Length = 238
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 71/126 (56%), Positives = 84/126 (66%), Gaps = 16/126 (12%)
Query: 200 PPNQPPSQPPNQPPN--QQPNNTSASLPSPLYPWMR-----------SQFERKRGRQTYT 246
PP P S+ +QP + Q PN T+ P+ +YPWM+ + E KR R YT
Sbjct: 96 PPPIPSSRACSQPASLKQPPNGTALKQPAVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYT 155
Query: 247 RYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK---SKDGG 303
R Q LELEKEFHFNRYLTRRRRIEIAH LCL+ERQIKIWFQNRRMKWKK++K +K
Sbjct: 156 RQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHKLPNTKGRS 215
Query: 304 SDAGSD 309
S A S+
Sbjct: 216 SSAASN 221
>gi|1708345|sp|P52949.1|HXA5_RAT RecName: Full=Homeobox protein Hox-A5; AltName: Full=Homeobox
protein Hox-1.3
gi|204644|gb|AAA67844.1| hox1.3 protein, partial [Rattus norvegicus]
Length = 233
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 59/78 (75%), Positives = 62/78 (79%), Gaps = 9/78 (11%)
Query: 228 LYPWMRSQF---------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWMR E KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+
Sbjct: 155 IYPWMRKLHISHDNIGGPEGKRARTCYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLS 214
Query: 279 ERQIKIWFQNRRMKWKKE 296
ERQIKIWFQNRRMKWKK+
Sbjct: 215 ERQIKIWFQNRRMKWKKD 232
>gi|48146025|emb|CAG33235.1| HOXC6 [Homo sapiens]
Length = 235
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 59/79 (74%), Positives = 66/79 (83%), Gaps = 9/79 (11%)
Query: 228 LYPWMRSQ---------FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWM+ +R+RGRQ Y+RYQTLELEKEFHFNRYLTRRRRIEIA+ALCLT
Sbjct: 122 IYPWMQRMNSHSGVGYGADRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLT 181
Query: 279 ERQIKIWFQNRRMKWKKEN 297
ERQIKIWFQNRRMKWKKE+
Sbjct: 182 ERQIKIWFQNRRMKWKKES 200
>gi|47971144|dbj|BAD22529.1| LjHox6w Homeobox [Lethenteron camtschaticum]
Length = 85
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 62/79 (78%), Positives = 67/79 (84%), Gaps = 9/79 (11%)
Query: 227 PLYPWMRSQ---------FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 277
P+YPWM+ +R+RGRQTY+RYQTLELEKEFHFNRYLTRRRRIEIAHALCL
Sbjct: 2 PIYPWMQRMNSHNGLGLGTDRRRGRQTYSRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 61
Query: 278 TERQIKIWFQNRRMKWKKE 296
TERQIKIWFQNRRMKWKKE
Sbjct: 62 TERQIKIWFQNRRMKWKKE 80
>gi|350405517|ref|XP_003487459.1| PREDICTED: hypothetical protein LOC100747162 [Bombus impatiens]
Length = 372
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 62/91 (68%), Positives = 69/91 (75%), Gaps = 10/91 (10%)
Query: 218 NNTSASLPSPLYPWMR----------SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRR 267
N + + P +Y WM+ + E KR R +YTRYQTLELEKEFHFNRYLTRRR
Sbjct: 250 TNPTGNEPPKIYSWMKRVHIGQSTVNANGEVKRQRTSYTRYQTLELEKEFHFNRYLTRRR 309
Query: 268 RIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
RIEIAHALCLTERQIKIWFQNRRMKWKKE+K
Sbjct: 310 RIEIAHALCLTERQIKIWFQNRRMKWKKEHK 340
>gi|340727747|ref|XP_003402198.1| PREDICTED: hypothetical protein LOC100643224 [Bombus terrestris]
Length = 372
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 62/91 (68%), Positives = 69/91 (75%), Gaps = 10/91 (10%)
Query: 218 NNTSASLPSPLYPWMR----------SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRR 267
N + + P +Y WM+ + E KR R +YTRYQTLELEKEFHFNRYLTRRR
Sbjct: 250 TNPTGNEPPKIYSWMKRVHIGQSTVNANGEVKRQRTSYTRYQTLELEKEFHFNRYLTRRR 309
Query: 268 RIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
RIEIAHALCLTERQIKIWFQNRRMKWKKE+K
Sbjct: 310 RIEIAHALCLTERQIKIWFQNRRMKWKKEHK 340
>gi|297466157|ref|XP_869789.3| PREDICTED: homeobox protein Hox-C6 isoform 1 [Bos taurus]
gi|297474426|ref|XP_002687279.1| PREDICTED: homeobox protein Hox-C6 [Bos taurus]
gi|335287898|ref|XP_003355472.1| PREDICTED: homeobox protein Hox-C6-like [Sus scrofa]
gi|338726314|ref|XP_003365298.1| PREDICTED: homeobox protein Hox-C6-like isoform 1 [Equus caballus]
gi|345792344|ref|XP_003433616.1| PREDICTED: homeobox protein Hox-C6 [Canis lupus familiaris]
gi|348581051|ref|XP_003476291.1| PREDICTED: homeobox protein Hox-C6-like [Cavia porcellus]
gi|410964585|ref|XP_003988834.1| PREDICTED: homeobox protein Hox-C6 isoform 1 [Felis catus]
gi|281342177|gb|EFB17761.1| hypothetical protein PANDA_012614 [Ailuropoda melanoleuca]
gi|296487930|tpg|DAA30043.1| TPA: homeobox C6 [Bos taurus]
gi|351706134|gb|EHB09053.1| Homeobox protein Hox-C6 [Heterocephalus glaber]
gi|431921605|gb|ELK18957.1| Homeobox protein Hox-C6 [Pteropus alecto]
gi|432112558|gb|ELK35274.1| Homeobox protein Hox-C6 [Myotis davidii]
gi|440900713|gb|ELR51791.1| Homeobox protein Hox-C6 [Bos grunniens mutus]
Length = 235
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 59/79 (74%), Positives = 66/79 (83%), Gaps = 9/79 (11%)
Query: 228 LYPWMRSQ---------FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWM+ +R+RGRQ Y+RYQTLELEKEFHFNRYLTRRRRIEIA+ALCLT
Sbjct: 122 IYPWMQRMNSHSGVGYGADRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLT 181
Query: 279 ERQIKIWFQNRRMKWKKEN 297
ERQIKIWFQNRRMKWKKE+
Sbjct: 182 ERQIKIWFQNRRMKWKKES 200
>gi|354490177|ref|XP_003507236.1| PREDICTED: homeobox protein Hox-C6-like [Cricetulus griseus]
gi|344239245|gb|EGV95348.1| Homeobox protein Hox-C6 [Cricetulus griseus]
Length = 235
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 59/79 (74%), Positives = 66/79 (83%), Gaps = 9/79 (11%)
Query: 228 LYPWMRSQ---------FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWM+ +R+RGRQ Y+RYQTLELEKEFHFNRYLTRRRRIEIA+ALCLT
Sbjct: 122 IYPWMQRMNSHSGVGYGADRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLT 181
Query: 279 ERQIKIWFQNRRMKWKKEN 297
ERQIKIWFQNRRMKWKKE+
Sbjct: 182 ERQIKIWFQNRRMKWKKES 200
>gi|18858851|ref|NP_571198.1| homeobox protein Hox-C6a [Danio rerio]
gi|60392438|sp|P15862.2|HXC6A_DANRE RecName: Full=Homeobox protein Hox-C6a; Short=Hox-C6; AltName:
Full=Homeobox protein Zf-61
gi|4322098|gb|AAD15958.1| homeobox protein [Danio rerio]
Length = 231
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 59/78 (75%), Positives = 65/78 (83%), Gaps = 9/78 (11%)
Query: 228 LYPWMRSQ---------FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWM+ +R+RGRQ Y+RYQTLELEKEFHFNRYLTRRRRIEIA+ALCLT
Sbjct: 123 IYPWMQRMNSHSGVGYGSDRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLT 182
Query: 279 ERQIKIWFQNRRMKWKKE 296
ERQIKIWFQNRRMKWKKE
Sbjct: 183 ERQIKIWFQNRRMKWKKE 200
>gi|7527478|gb|AAF63162.1|AF237818_1 fushi tarazu-like protein [Archegozetes longisetosus]
Length = 278
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 61/77 (79%), Positives = 65/77 (84%), Gaps = 4/77 (5%)
Query: 228 LYPWMRSQFER----KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIK 283
+PWM+S + KR RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAH+L LTERQIK
Sbjct: 182 FFPWMKSYTDSGQGPKRTRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHSLGLTERQIK 241
Query: 284 IWFQNRRMKWKKENKSK 300
IWFQNRRMK KKENK K
Sbjct: 242 IWFQNRRMKAKKENKIK 258
>gi|259013344|ref|NP_001158380.1| homeobox 7 [Saccoglossus kowalevskii]
gi|116294310|gb|AAP79287.2| hox 7 [Saccoglossus kowalevskii]
Length = 263
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 61/91 (67%), Positives = 74/91 (81%), Gaps = 6/91 (6%)
Query: 218 NNTSASL--PSPLYPWMRS----QFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEI 271
NN +++ P+ LYPW+ + + +KR RQTYTRYQTLELEKEFH+NRYLTRRRRIE+
Sbjct: 126 NNVMSAMQNPTTLYPWVNATGAPEVPKKRCRQTYTRYQTLELEKEFHYNRYLTRRRRIEL 185
Query: 272 AHALCLTERQIKIWFQNRRMKWKKENKSKDG 302
+H L LTERQIKIWFQNRRMK+KKE+K DG
Sbjct: 186 SHLLGLTERQIKIWFQNRRMKYKKESKKDDG 216
>gi|254692762|dbj|BAH23876.2| transcription factor Hox7 [Balanoglossus misakiensis]
Length = 246
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 62/89 (69%), Positives = 73/89 (82%), Gaps = 6/89 (6%)
Query: 225 PSPLYPWMRS----QFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTER 280
P+ LYPW+ + + +KR RQTYTRYQTLELEKEFH+NRYLTRRRRIE++H L LTER
Sbjct: 131 PTTLYPWVNAAGMPEVPKKRCRQTYTRYQTLELEKEFHYNRYLTRRRRIELSHLLGLTER 190
Query: 281 QIKIWFQNRRMKWKKENKSKDGGSDAGSD 309
QIKIWFQNRRMK+KKE+K D S+ GSD
Sbjct: 191 QIKIWFQNRRMKYKKESKKDD--SETGSD 217
>gi|291500845|gb|ADE08353.1| homeobox C6 [Monodelphis domestica]
Length = 208
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 59/79 (74%), Positives = 66/79 (83%), Gaps = 9/79 (11%)
Query: 228 LYPWMRSQ---------FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWM+ +R+RGRQ Y+RYQTLELEKEFHFNRYLTRRRRIEIA+ALCLT
Sbjct: 95 IYPWMQRMNSHSGVGYGADRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLT 154
Query: 279 ERQIKIWFQNRRMKWKKEN 297
ERQIKIWFQNRRMKWKKE+
Sbjct: 155 ERQIKIWFQNRRMKWKKES 173
>gi|277349090|ref|NP_001162171.1| ultrabithorax [Apis mellifera]
gi|269979254|gb|ACZ56139.1| ultrabithorax [Apis mellifera]
Length = 330
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 65/98 (66%), Positives = 72/98 (73%), Gaps = 9/98 (9%)
Query: 202 NQPPSQPPNQPPNQQPNNTSASLPSPLYPWMR---SQFERKRGRQTYTRYQTLELEKEFH 258
N SQP +QQP+N + YPWM + R+RGRQTYTRYQTLELEKEFH
Sbjct: 198 NSSASQPVATQLHQQPSNHT------FYPWMAIAGANGMRRRGRQTYTRYQTLELEKEFH 251
Query: 259 FNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
N YLTRRRRIE+AH+LCLTERQIKIWFQNRRMK KKE
Sbjct: 252 TNHYLTRRRRIEMAHSLCLTERQIKIWFQNRRMKLKKE 289
>gi|1333934|emb|CAA31022.1| unnamed protein product [Mus musculus]
Length = 221
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 62/90 (68%), Positives = 71/90 (78%), Gaps = 11/90 (12%)
Query: 217 PNNTSASLPSPLYPWMRSQ---------FERKRGRQTYTRYQTLELEKEFHFNRYLTRRR 267
P + AS+ +YPWM+ +R+RGRQ Y+RYQTLELEKEFHFNRYLTRRR
Sbjct: 99 PQDQKASIQ--IYPWMQRMNSHSGVGYGADRRRGRQIYSRYQTLELEKEFHFNRYLTRRR 156
Query: 268 RIEIAHALCLTERQIKIWFQNRRMKWKKEN 297
RIEIA+ALCLTERQIKIWFQNRRMKWKKE+
Sbjct: 157 RIEIANALCLTERQIKIWFQNRRMKWKKES 186
>gi|969087|gb|AAA84411.1| UBXIIB [Drosophila melanogaster]
Length = 372
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 65/103 (63%), Positives = 71/103 (68%), Gaps = 3/103 (2%)
Query: 195 NHQQTPPNQPPSQPPNQPPNQQPNNTSASLPSPLYP-WMRSQFERKRGRQTYTRYQTLEL 253
NH P + P P + S SL L P W+ + R+RGRQTYTRYQTLEL
Sbjct: 236 NHTFYPWMAIAGECPEDPT--KSKRYSESLAGSLLPDWLGTNGLRRRGRQTYTRYQTLEL 293
Query: 254 EKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
EKEFH N YLTRRRRIE+AHALCLTERQIKIWFQNRRMK KKE
Sbjct: 294 EKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKKE 336
>gi|148227570|ref|NP_001083341.1| homeobox D8 [Xenopus laevis]
gi|38014744|gb|AAH60408.1| MGC68588 protein [Xenopus laevis]
Length = 233
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 67/118 (56%), Positives = 84/118 (71%), Gaps = 5/118 (4%)
Query: 188 QHHQVVVNHQQTPPNQ-PPSQPPNQPPNQQPNNTSASLPSP-LYPWMRSQFE--RKRGRQ 243
Q + HQ++ P Q P + P P + + P+ ++PWMR+Q R+RGRQ
Sbjct: 87 QRQHIFTTHQESEPVQYPDCKSPCASVGADPEHLHQNSPASHMFPWMRAQVAPGRRRGRQ 146
Query: 244 TYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSKD 301
TY+R+QTLELEKEF FN YLTR+RRIE++HAL LTERQ+KIWFQNRRMKWKKEN SKD
Sbjct: 147 TYSRFQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKEN-SKD 203
>gi|53733782|gb|AAH83307.1| Hoxc6a protein [Danio rerio]
gi|197247195|gb|AAI65049.1| Hoxc6a protein [Danio rerio]
Length = 223
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 59/78 (75%), Positives = 65/78 (83%), Gaps = 9/78 (11%)
Query: 228 LYPWMRSQ---------FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWM+ +R+RGRQ Y+RYQTLELEKEFHFNRYLTRRRRIEIA+ALCLT
Sbjct: 100 IYPWMQRMNSHSGVGYGSDRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLT 159
Query: 279 ERQIKIWFQNRRMKWKKE 296
ERQIKIWFQNRRMKWKKE
Sbjct: 160 ERQIKIWFQNRRMKWKKE 177
>gi|156940|gb|AAA79241.1| antennapedia homeodomain protein, partial [Drosophila melanogaster]
Length = 61
Score = 130 bits (327), Expect = 8e-28, Method: Composition-based stats.
Identities = 60/61 (98%), Positives = 60/61 (98%)
Query: 238 RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 297
RKR RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN
Sbjct: 1 RKRERQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 60
Query: 298 K 298
K
Sbjct: 61 K 61
>gi|24647525|ref|NP_732173.1| ultrabithorax, isoform C [Drosophila melanogaster]
gi|23171495|gb|AAN13719.1| ultrabithorax, isoform C [Drosophila melanogaster]
Length = 372
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 65/103 (63%), Positives = 71/103 (68%), Gaps = 3/103 (2%)
Query: 195 NHQQTPPNQPPSQPPNQPPNQQPNNTSASLPSPLYP-WMRSQFERKRGRQTYTRYQTLEL 253
NH P + P P + S SL L P W+ + R+RGRQTYTRYQTLEL
Sbjct: 236 NHTFYPWMAIAGECPEDPT--KSKRYSESLAGSLLPDWLGTNGLRRRGRQTYTRYQTLEL 293
Query: 254 EKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
EKEFH N YLTRRRRIE+AHALCLTERQIKIWFQNRRMK KKE
Sbjct: 294 EKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKKE 336
>gi|327283061|ref|XP_003226260.1| PREDICTED: hypothetical protein LOC100565849 [Anolis carolinensis]
Length = 540
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 57/75 (76%), Positives = 66/75 (88%), Gaps = 2/75 (2%)
Query: 225 PSPLYPWMRSQFE--RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQI 282
PSP++PWMR Q R+RGRQTY+R+QTLELEKEF FN YLTR+RRIE++H L LTERQ+
Sbjct: 434 PSPMFPWMRPQAAPGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHGLGLTERQV 493
Query: 283 KIWFQNRRMKWKKEN 297
KIWFQNRRMKWKKEN
Sbjct: 494 KIWFQNRRMKWKKEN 508
>gi|297262540|ref|XP_001108363.2| PREDICTED: hypothetical protein LOC704526 isoform 3 [Macaca
mulatta]
Length = 948
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 59/79 (74%), Positives = 66/79 (83%), Gaps = 9/79 (11%)
Query: 228 LYPWMRSQ---------FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWM+ +R+RGRQ Y+RYQTLELEKEFHFNRYLTRRRRIEIA+ALCLT
Sbjct: 835 IYPWMQRMNSHSGVGYGADRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLT 894
Query: 279 ERQIKIWFQNRRMKWKKEN 297
ERQIKIWFQNRRMKWKKE+
Sbjct: 895 ERQIKIWFQNRRMKWKKES 913
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 50/60 (83%), Positives = 56/60 (93%)
Query: 238 RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 297
R+ GRQTY+RYQTLELEKEF FN YLTR+RRIE++HAL LTERQ+KIWFQNRRMKWKKEN
Sbjct: 183 RRSGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKEN 242
>gi|1708344|sp|P50208.1|HXA5_AMBME RecName: Full=Homeobox protein Hox-A5
gi|746418|gb|AAA91634.1| homeobox protein, partial [Ambystoma mexicanum]
Length = 148
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 61/82 (74%), Positives = 64/82 (78%), Gaps = 9/82 (10%)
Query: 228 LYPWMRSQF---------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWMR KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+
Sbjct: 54 IYPWMRKLHISHDNIGGPRGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLS 113
Query: 279 ERQIKIWFQNRRMKWKKENKSK 300
ERQIKIWFQNRRMKWKK+NK K
Sbjct: 114 ERQIKIWFQNRRMKWKKDNKLK 135
>gi|391339412|ref|XP_003744044.1| PREDICTED: uncharacterized protein LOC100902699 [Metaseiulus
occidentalis]
Length = 274
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 63/86 (73%), Positives = 68/86 (79%), Gaps = 10/86 (11%)
Query: 223 SLPSPLYPWMR----------SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIA 272
S P +YPWMR S E KR R +YTRYQTLELEKEFHFNRYLTRRRRIEIA
Sbjct: 123 SQPPQIYPWMRKVHVGQNGVNSMGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIA 182
Query: 273 HALCLTERQIKIWFQNRRMKWKKENK 298
HALCL+ERQIKIWFQNRRMKWKKE++
Sbjct: 183 HALCLSERQIKIWFQNRRMKWKKEHR 208
>gi|121308920|dbj|BAF43725.1| transcription factor Hox7 [Metacrinus rotundus]
Length = 256
Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 64/88 (72%), Positives = 70/88 (79%), Gaps = 8/88 (9%)
Query: 229 YPWMRS-------QFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQ 281
YPWM + RKR RQTYTRYQTLELEKEFHFNRYLTRRRRIE++H L LTERQ
Sbjct: 144 YPWMNVTAAPTGVEMGRKRCRQTYTRYQTLELEKEFHFNRYLTRRRRIELSHLLGLTERQ 203
Query: 282 IKIWFQNRRMKWKKENKSKDGGSDAGSD 309
IKIWFQNRRMK+KKENK KDG +D S+
Sbjct: 204 IKIWFQNRRMKYKKENK-KDGVTDKESE 230
>gi|242011820|ref|XP_002426642.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212510806|gb|EEB13904.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 351
Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 98/196 (50%), Positives = 120/196 (61%), Gaps = 21/196 (10%)
Query: 1 MSSYFANSYMPDIKNGGVLPPEHHQQHHYGATVLPQNNGVEDPSMYDPRQV---HHYGQV 57
MSSYFAN YMPD++NGGV+P E H HYGA +PQ + + RQ HHYG
Sbjct: 79 MSSYFANQYMPDMRNGGVVP-EGHPHQHYGA--VPQGESDHSCNGGEIRQGIPPHHYGGP 135
Query: 58 PNNGQPVHGMPYPRFPPYDRMDIRNAAYYGAHEGGME-----QYPRPDSPSMGHM-GPQN 111
P GQP GMPYPRFPPYDR+DIR AAYY E G++ Y RP+SPS+GHM GP N
Sbjct: 136 PTGGQPPQGMPYPRFPPYDRVDIRAAAYYQQQELGVDSVDTNSYGRPNSPSIGHMGGPPN 195
Query: 112 GHQTPVVYASCKLQAA------VGNGIIPGPESPNDLVDPTLNNHHHHQHHHMNHHPHPH 165
GHQTPVVY+SCKLQAA V + P + P L + N+ +H HHH+ H H
Sbjct: 196 GHQTPVVYSSCKLQAAGVQQNIVAGQVTPPLDVPQPLNNHNANHMNHQPHHHLQMQHHNH 255
Query: 166 PQQQQPQQPPPQHMMY 181
+Q+ Q +HM+Y
Sbjct: 256 MKQEYQQH---EHMLY 268
>gi|195500193|ref|XP_002097268.1| GE26131 [Drosophila yakuba]
gi|194183369|gb|EDW96980.1| GE26131 [Drosophila yakuba]
Length = 381
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/77 (77%), Positives = 64/77 (83%), Gaps = 1/77 (1%)
Query: 221 SASLPSPLYP-WMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
S SL L P W+ + R+RGRQTYTRYQTLELEKEFH N YLTRRRRIE+AHALCLTE
Sbjct: 269 SESLAGSLLPDWLGTNGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTE 328
Query: 280 RQIKIWFQNRRMKWKKE 296
RQIKIWFQNRRMK KKE
Sbjct: 329 RQIKIWFQNRRMKLKKE 345
>gi|24647523|ref|NP_732172.1| ultrabithorax, isoform E [Drosophila melanogaster]
gi|23171494|gb|AAN13718.1| ultrabithorax, isoform E [Drosophila melanogaster]
gi|33636523|gb|AAQ23559.1| RE43738p [Drosophila melanogaster]
gi|220945946|gb|ACL85516.1| Ubx-PE [synthetic construct]
gi|220955710|gb|ACL90398.1| Ubx-PE [synthetic construct]
Length = 380
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/77 (77%), Positives = 64/77 (83%), Gaps = 1/77 (1%)
Query: 221 SASLPSPLYP-WMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
S SL L P W+ + R+RGRQTYTRYQTLELEKEFH N YLTRRRRIE+AHALCLTE
Sbjct: 268 SESLAGSLLPDWLGTNGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTE 327
Query: 280 RQIKIWFQNRRMKWKKE 296
RQIKIWFQNRRMK KKE
Sbjct: 328 RQIKIWFQNRRMKLKKE 344
>gi|194900579|ref|XP_001979833.1| GG16812 [Drosophila erecta]
gi|190651536|gb|EDV48791.1| GG16812 [Drosophila erecta]
Length = 381
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/77 (77%), Positives = 64/77 (83%), Gaps = 1/77 (1%)
Query: 221 SASLPSPLYP-WMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
S SL L P W+ + R+RGRQTYTRYQTLELEKEFH N YLTRRRRIE+AHALCLTE
Sbjct: 269 SESLAGSLLPDWLGTNGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTE 328
Query: 280 RQIKIWFQNRRMKWKKE 296
RQIKIWFQNRRMK KKE
Sbjct: 329 RQIKIWFQNRRMKLKKE 345
>gi|306879|gb|AAA36007.1| homeo box c8 protein [Homo sapiens]
Length = 153
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/109 (60%), Positives = 76/109 (69%), Gaps = 14/109 (12%)
Query: 198 QTPPNQPPSQPPNQPPNQQPNNTSASLPSPLYPWMRSQ---------FERKRGRQTYTRY 248
QT Q S + P + AS+ +YPWM+ +R+RGRQ Y+RY
Sbjct: 15 QTSIAQDFSSEQGRTA---PQDQKASIQ--IYPWMQRMNSHSGVGYGADRRRGRQIYSRY 69
Query: 249 QTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 297
QTLELEKEFHFNRYLTRRRRIEIA+ALCLTERQIKIWFQNRRMKWKKE+
Sbjct: 70 QTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKES 118
>gi|344252749|gb|EGW08853.1| Homeobox protein Hox-A5 [Cricetulus griseus]
Length = 222
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/83 (74%), Positives = 65/83 (78%), Gaps = 9/83 (10%)
Query: 228 LYPWMRSQF---------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWMR E KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+
Sbjct: 24 IYPWMRKLHISHDNIGGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLS 83
Query: 279 ERQIKIWFQNRRMKWKKENKSKD 301
ERQIKIWFQNRRMKWKK+NK K
Sbjct: 84 ERQIKIWFQNRRMKWKKDNKLKS 106
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 50/60 (83%), Positives = 54/60 (90%)
Query: 239 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
KR R YTR Q LELEKEFHFNRYLTRRRRIEIAH LCL+ERQ+KIWFQNRRMKWKK++K
Sbjct: 118 KRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK 177
>gi|969090|gb|AAA84408.1| UBXIA [Drosophila melanogaster]
Length = 380
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/77 (77%), Positives = 64/77 (83%), Gaps = 1/77 (1%)
Query: 221 SASLPSPLYP-WMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
S SL L P W+ + R+RGRQTYTRYQTLELEKEFH N YLTRRRRIE+AHALCLTE
Sbjct: 268 SESLAGSLLPDWLGTNGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTE 327
Query: 280 RQIKIWFQNRRMKWKKE 296
RQIKIWFQNRRMK KKE
Sbjct: 328 RQIKIWFQNRRMKLKKE 344
>gi|449266232|gb|EMC77311.1| Homeobox protein Hox-D4 [Columba livia]
Length = 237
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/141 (51%), Positives = 85/141 (60%), Gaps = 14/141 (9%)
Query: 183 QQPPPQHHQVVVNHQQTPPNQPPSQPPNQPPNQQPNNTSASLPSPLYPWMR--------- 233
Q P H H TPP QP + PN ++ P+ +YPWM+
Sbjct: 80 QSGPASHFPGQAEHCPTPPMPNSRACSQQPALKPPNGSAVKQPAVVYPWMKKVHVNSVNP 139
Query: 234 --SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRM 291
+ E KR R YTR Q LELEKEFHFNRYLTRRRRIEIAH LCL+ERQIKIWFQNRRM
Sbjct: 140 NYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRM 199
Query: 292 KWKKENK---SKDGGSDAGSD 309
KWKK++K +K S +GS+
Sbjct: 200 KWKKDHKLPNTKGRSSSSGSN 220
>gi|432866257|ref|XP_004070762.1| PREDICTED: homeobox protein Hox-C5a-like [Oryzias latipes]
gi|74267561|dbj|BAE44279.1| hoxC5a [Oryzias latipes]
gi|83016964|dbj|BAE53487.1| hoxC5a [Oryzias latipes]
Length = 228
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 58/78 (74%), Positives = 64/78 (82%), Gaps = 5/78 (6%)
Query: 228 LYPWMRS-----QFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQI 282
+YPWM + E KR R +YTRYQTLELEKEFHFNRYL+RRRRIEIAH LCL ERQI
Sbjct: 148 IYPWMTKLHMSHESEGKRSRTSYTRYQTLELEKEFHFNRYLSRRRRIEIAHTLCLNERQI 207
Query: 283 KIWFQNRRMKWKKENKSK 300
KIWFQNRRMKWKK++K K
Sbjct: 208 KIWFQNRRMKWKKDSKLK 225
>gi|256070808|ref|XP_002571734.1| hox protein Smox1 [Schistosoma mansoni]
Length = 745
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/87 (70%), Positives = 68/87 (78%), Gaps = 6/87 (6%)
Query: 215 QQPNNTSASLPSPLYPWMR-----SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRI 269
+Q N+S S +YPWM ++KR RQTYTRYQTLELEKEFHFN+YLTRRRRI
Sbjct: 549 RQSGNSSES-NVVVYPWMNPKGTDISVDQKRTRQTYTRYQTLELEKEFHFNKYLTRRRRI 607
Query: 270 EIAHALCLTERQIKIWFQNRRMKWKKE 296
EIAH L LTERQIKIWFQNRRMKWKK+
Sbjct: 608 EIAHTLTLTERQIKIWFQNRRMKWKKD 634
>gi|262263017|gb|ACY39977.1| HoxD4 [Heterodontus francisci]
Length = 238
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/137 (53%), Positives = 86/137 (62%), Gaps = 20/137 (14%)
Query: 173 QPPPQHMMYAQQPPPQHHQVVVNHQQTPPNQPPSQPPNQPPNQQPNNTSASLPSPLYPWM 232
QP PQ+ + Q P QV + +P SQ + P NQ N T+ P+ +YPWM
Sbjct: 78 QPAPQNHLTGQGEPVAPLQVSIG-------RPCSQQQHNPKNQ--NGTATKQPAVVYPWM 128
Query: 233 R-----------SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQ 281
+ + E KR R YTR Q LELEKEFHFNRYLTRRRRIEIAH LCL+ERQ
Sbjct: 129 KKIHVNTVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQ 188
Query: 282 IKIWFQNRRMKWKKENK 298
IKIWFQNRRMKWKK++K
Sbjct: 189 IKIWFQNRRMKWKKDHK 205
>gi|24497544|ref|NP_710160.1| homeobox protein Hox-C6 isoform 2 [Homo sapiens]
gi|426372804|ref|XP_004053306.1| PREDICTED: homeobox protein Hox-C6 isoform 2 [Gorilla gorilla
gorilla]
gi|51412|emb|CAA31023.1| unnamed protein product [Mus musculus]
gi|26341506|dbj|BAC34415.1| unnamed protein product [Mus musculus]
gi|119617152|gb|EAW96746.1| homeobox C6, isoform CRA_a [Homo sapiens]
gi|189054716|dbj|BAG37349.1| unnamed protein product [Homo sapiens]
Length = 153
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/109 (60%), Positives = 76/109 (69%), Gaps = 14/109 (12%)
Query: 198 QTPPNQPPSQPPNQPPNQQPNNTSASLPSPLYPWMRSQ---------FERKRGRQTYTRY 248
QT Q S + P + AS+ +YPWM+ +R+RGRQ Y+RY
Sbjct: 15 QTSIAQDFSSEQGRTA---PQDQKASIQ--IYPWMQRMNSHSGVGYGADRRRGRQIYSRY 69
Query: 249 QTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 297
QTLELEKEFHFNRYLTRRRRIEIA+ALCLTERQIKIWFQNRRMKWKKE+
Sbjct: 70 QTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKES 118
>gi|51474|emb|CAA34517.1| unnamed protein product [Mus musculus]
Length = 153
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/109 (60%), Positives = 76/109 (69%), Gaps = 14/109 (12%)
Query: 198 QTPPNQPPSQPPNQPPNQQPNNTSASLPSPLYPWMRSQ---------FERKRGRQTYTRY 248
QT Q S + P + AS+ +YPWM+ +R+RGRQ Y+RY
Sbjct: 15 QTSIAQDFSSEQGRTA---PQDQKASIQ--IYPWMQRMNSHSGVGYGADRRRGRQIYSRY 69
Query: 249 QTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 297
QTLELEKEFHFNRYLTRRRRIEIA+ALCLTERQIKIWFQNRRMKWKKE+
Sbjct: 70 QTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKES 118
>gi|5163356|gb|AAD40646.1|AF144890_1 HB3 homeodomain protein [Priapulus caudatus]
Length = 73
Score = 129 bits (325), Expect = 1e-27, Method: Composition-based stats.
Identities = 55/62 (88%), Positives = 60/62 (96%)
Query: 238 RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 297
R+RGRQTYTR+QTLELEKEFHFNRYLTRRRRIEIA+ LCLTERQIKIWFQNRRMKWKKE
Sbjct: 1 RRRGRQTYTRFQTLELEKEFHFNRYLTRRRRIEIANMLCLTERQIKIWFQNRRMKWKKEK 60
Query: 298 KS 299
++
Sbjct: 61 QA 62
>gi|387231849|gb|AFJ72635.1| homeobox C6, partial [Neophocaena phocaenoides]
gi|387231851|gb|AFJ72636.1| homeobox C6, partial [Balaenoptera physalus]
Length = 101
Score = 129 bits (325), Expect = 1e-27, Method: Composition-based stats.
Identities = 55/61 (90%), Positives = 60/61 (98%)
Query: 237 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
+R+RGRQ Y+RYQTLELEKEFHFNRYLTRRRRIEIA+ALCLTERQIKIWFQNRRMKWKKE
Sbjct: 6 DRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 65
Query: 297 N 297
+
Sbjct: 66 S 66
>gi|193905|gb|AAA37832.1| Hox-3.3 protein, partial [Mus musculus]
Length = 103
Score = 129 bits (325), Expect = 1e-27, Method: Composition-based stats.
Identities = 55/61 (90%), Positives = 60/61 (98%)
Query: 237 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
+R+RGRQ Y+RYQTLELEKEFHFNRYLTRRRRIEIA+ALCLTERQIKIWFQNRRMKWKKE
Sbjct: 8 DRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 67
Query: 297 N 297
+
Sbjct: 68 S 68
>gi|8439289|emb|CAB94151.1| HOXC-6 [Gallus gallus]
Length = 101
Score = 129 bits (325), Expect = 1e-27, Method: Composition-based stats.
Identities = 55/61 (90%), Positives = 60/61 (98%)
Query: 237 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
+R+RGRQ Y+RYQTLELEKEFHFNRYLTRRRRIEIA+ALCLTERQIKIWFQNRRMKWKKE
Sbjct: 7 DRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 66
Query: 297 N 297
+
Sbjct: 67 S 67
>gi|60172784|gb|AAX14497.1| hox protein Smox1 [Schistosoma mansoni]
Length = 745
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/87 (70%), Positives = 68/87 (78%), Gaps = 6/87 (6%)
Query: 215 QQPNNTSASLPSPLYPWMR-----SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRI 269
+Q N+S S +YPWM ++KR RQTYTRYQTLELEKEFHFN+YLTRRRRI
Sbjct: 549 RQSGNSSES-NVVVYPWMNPKGTDISVDQKRTRQTYTRYQTLELEKEFHFNKYLTRRRRI 607
Query: 270 EIAHALCLTERQIKIWFQNRRMKWKKE 296
EIAH L LTERQIKIWFQNRRMKWKK+
Sbjct: 608 EIAHTLTLTERQIKIWFQNRRMKWKKD 634
>gi|17985969|ref|NP_536752.1| ultrabithorax, isoform A [Drosophila melanogaster]
gi|48428932|sp|P83949.1|UBX_DROME RecName: Full=Homeotic protein ultrabithorax
gi|48428933|sp|P83950.1|UBX_DROSI RecName: Full=Homeotic protein ultrabithorax
gi|433477|emb|CAA53803.1| homeotic ultrabithorax protein [Drosophila melanogaster]
gi|829190|emb|CAA29194.1| Ultrabithorax gene product [Drosophila melanogaster]
gi|4323521|gb|AAD16402.1| Ultrabithorax [Drosophila simulans]
gi|10726569|gb|AAF55355.2| ultrabithorax, isoform A [Drosophila melanogaster]
Length = 389
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/77 (77%), Positives = 64/77 (83%), Gaps = 1/77 (1%)
Query: 221 SASLPSPLYP-WMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
S SL L P W+ + R+RGRQTYTRYQTLELEKEFH N YLTRRRRIE+AHALCLTE
Sbjct: 277 SESLAGSLLPDWLGTNGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTE 336
Query: 280 RQIKIWFQNRRMKWKKE 296
RQIKIWFQNRRMK KKE
Sbjct: 337 RQIKIWFQNRRMKLKKE 353
>gi|327280444|ref|XP_003224962.1| PREDICTED: homeobox protein Hox-A5-like [Anolis carolinensis]
Length = 305
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 57/65 (87%), Positives = 59/65 (90%)
Query: 237 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
E KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+ERQIKIWFQNRRMKWKK+
Sbjct: 229 EGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 288
Query: 297 NKSKD 301
NK K
Sbjct: 289 NKLKS 293
>gi|410901643|ref|XP_003964305.1| PREDICTED: homeobox protein Hox-B8a-like [Takifugu rubripes]
Length = 283
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 58/75 (77%), Positives = 66/75 (88%), Gaps = 2/75 (2%)
Query: 225 PSPLYPWMRSQFE--RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQI 282
P+ L+PWMR Q R+RGRQTY+RYQTLELEKEF FN YLTR+RRIE++HAL LTERQ+
Sbjct: 134 PTQLFPWMRPQVAAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALALTERQV 193
Query: 283 KIWFQNRRMKWKKEN 297
KIWFQNRRMKWKKEN
Sbjct: 194 KIWFQNRRMKWKKEN 208
>gi|24647521|ref|NP_732171.1| ultrabithorax, isoform D [Drosophila melanogaster]
gi|23171493|gb|AAN13717.1| ultrabithorax, isoform D [Drosophila melanogaster]
gi|300684546|gb|ADK27789.1| LD09363p [Drosophila melanogaster]
Length = 363
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/77 (77%), Positives = 64/77 (83%), Gaps = 1/77 (1%)
Query: 221 SASLPSPLYP-WMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
S SL L P W+ + R+RGRQTYTRYQTLELEKEFH N YLTRRRRIE+AHALCLTE
Sbjct: 251 SESLAGSLLPDWLGTNGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTE 310
Query: 280 RQIKIWFQNRRMKWKKE 296
RQIKIWFQNRRMK KKE
Sbjct: 311 RQIKIWFQNRRMKLKKE 327
>gi|355695025|gb|AER99869.1| homeobox B7 [Mustela putorius furo]
Length = 188
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/85 (70%), Positives = 67/85 (78%), Gaps = 1/85 (1%)
Query: 206 SQPPNQPPNQQPNNTSASLPSPLYPWMRSQ-FERKRGRQTYTRYQTLELEKEFHFNRYLT 264
S Q+ ++ +A +YPWMRS +RKRGRQTYTRYQTLELEKEFH+NRYLT
Sbjct: 104 SAKAAGAKEQRDSDLAAESNFRIYPWMRSSGTDRKRGRQTYTRYQTLELEKEFHYNRYLT 163
Query: 265 RRRRIEIAHALCLTERQIKIWFQNR 289
RRRRIEIAHALCLTERQIKIWFQNR
Sbjct: 164 RRRRIEIAHALCLTERQIKIWFQNR 188
>gi|74267543|dbj|BAE44270.1| hoxB8a [Oryzias latipes]
gi|83016950|dbj|BAE53477.1| hoxB8a [Oryzias latipes]
Length = 274
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 58/75 (77%), Positives = 66/75 (88%), Gaps = 2/75 (2%)
Query: 225 PSPLYPWMRSQFE--RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQI 282
P+ L+PWMR Q R+RGRQTY+RYQTLELEKEF FN YLTR+RRIE++HAL LTERQ+
Sbjct: 134 PTQLFPWMRPQVAAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALALTERQV 193
Query: 283 KIWFQNRRMKWKKEN 297
KIWFQNRRMKWKKEN
Sbjct: 194 KIWFQNRRMKWKKEN 208
>gi|969086|gb|AAA84412.1| UBXIB [Drosophila melanogaster]
Length = 389
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/77 (77%), Positives = 64/77 (83%), Gaps = 1/77 (1%)
Query: 221 SASLPSPLYP-WMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
S SL L P W+ + R+RGRQTYTRYQTLELEKEFH N YLTRRRRIE+AHALCLTE
Sbjct: 277 SESLAGSLLPDWLGTNGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTE 336
Query: 280 RQIKIWFQNRRMKWKKE 296
RQIKIWFQNRRMK KKE
Sbjct: 337 RQIKIWFQNRRMKLKKE 353
>gi|220898217|gb|ACL81470.1| HoxD8 [Latimeria menadoensis]
Length = 234
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/87 (71%), Positives = 73/87 (83%), Gaps = 3/87 (3%)
Query: 222 ASLPSPLYPWMRSQFE--RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
S PS ++PWMRSQ R+RGRQTY+R+QTLELEKEF FN YLTR+RRIE++H+L LTE
Sbjct: 123 TSSPSQMFPWMRSQAATGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHSLGLTE 182
Query: 280 RQIKIWFQNRRMKWKKENKSKDGGSDA 306
RQIKIWFQNRRMKWKKEN +KD S +
Sbjct: 183 RQIKIWFQNRRMKWKKEN-NKDTFSTS 208
>gi|1762582|gb|AAB39545.1| ANTP, partial [Manduca sexta]
Length = 81
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/82 (81%), Positives = 71/82 (86%), Gaps = 3/82 (3%)
Query: 238 RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 297
RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAH L LTERQIKIWFQNRRMKWKKEN
Sbjct: 1 RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAH-LPLTERQIKIWFQNRRMKWKKEN 59
Query: 298 KSKD--GGSDAGSDITPATSPQ 317
K+K G D +++P TSPQ
Sbjct: 60 KTKGEPGSGDEPDNMSPPTSPQ 81
>gi|340727736|ref|XP_003402193.1| PREDICTED: homeotic protein ultrabithorax-like [Bombus terrestris]
Length = 330
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/98 (66%), Positives = 71/98 (72%), Gaps = 9/98 (9%)
Query: 202 NQPPSQPPNQPPNQQPNNTSASLPSPLYPWMR---SQFERKRGRQTYTRYQTLELEKEFH 258
N SQP +QQP N + YPWM + R+RGRQTYTRYQTLELEKEFH
Sbjct: 198 NSSASQPVATQLHQQPTNHT------FYPWMAIAGANGMRRRGRQTYTRYQTLELEKEFH 251
Query: 259 FNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
N YLTRRRRIE+AH+LCLTERQIKIWFQNRRMK KKE
Sbjct: 252 TNHYLTRRRRIEMAHSLCLTERQIKIWFQNRRMKLKKE 289
>gi|154183819|gb|ABS70760.1| Hoxc5a [Haplochromis burtoni]
Length = 227
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 58/78 (74%), Positives = 64/78 (82%), Gaps = 5/78 (6%)
Query: 228 LYPWMRS-----QFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQI 282
+YPWM + E KR R +YTRYQTLELEKEFHFNRYL+RRRRIEIAH LCL ERQI
Sbjct: 147 IYPWMTKLHMSHESEGKRSRTSYTRYQTLELEKEFHFNRYLSRRRRIEIAHTLCLNERQI 206
Query: 283 KIWFQNRRMKWKKENKSK 300
KIWFQNRRMKWKK++K K
Sbjct: 207 KIWFQNRRMKWKKDSKIK 224
>gi|969089|gb|AAA84409.1| UBXIIA [Drosophila melanogaster]
Length = 363
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/77 (77%), Positives = 64/77 (83%), Gaps = 1/77 (1%)
Query: 221 SASLPSPLYP-WMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
S SL L P W+ + R+RGRQTYTRYQTLELEKEFH N YLTRRRRIE+AHALCLTE
Sbjct: 251 SESLAGSLLPDWLGTNGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTE 310
Query: 280 RQIKIWFQNRRMKWKKE 296
RQIKIWFQNRRMK KKE
Sbjct: 311 RQIKIWFQNRRMKLKKE 327
>gi|348521444|ref|XP_003448236.1| PREDICTED: homeobox protein Hox-C5a [Oreochromis niloticus]
Length = 227
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 58/78 (74%), Positives = 64/78 (82%), Gaps = 5/78 (6%)
Query: 228 LYPWMRS-----QFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQI 282
+YPWM + E KR R +YTRYQTLELEKEFHFNRYL+RRRRIEIAH LCL ERQI
Sbjct: 147 IYPWMTKLHMSHESEGKRSRTSYTRYQTLELEKEFHFNRYLSRRRRIEIAHTLCLNERQI 206
Query: 283 KIWFQNRRMKWKKENKSK 300
KIWFQNRRMKWKK++K K
Sbjct: 207 KIWFQNRRMKWKKDSKIK 224
>gi|259013406|ref|NP_001158410.1| homeobox 5 [Saccoglossus kowalevskii]
gi|116574502|gb|ABK00019.1| hox 5 [Saccoglossus kowalevskii]
Length = 243
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/117 (55%), Positives = 71/117 (60%), Gaps = 24/117 (20%)
Query: 221 SASLPSPLYPWMRSQ--------FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIA 272
+ S +YPWMR E KR R YTRYQTLELEKEFHFNRYLTRRRRIEIA
Sbjct: 126 TGSTQDGVYPWMRRMHMSSGTNGMEAKRSRTAYTRYQTLELEKEFHFNRYLTRRRRIEIA 185
Query: 273 HALCLTERQIKIWFQNRRMKWKKE----------------NKSKDGGSDAGSDITPA 313
HAL L+ERQIKIWFQNRRMKWKKE N + GG A ++P
Sbjct: 186 HALGLSERQIKIWFQNRRMKWKKEHNVKSISQIMNPDTKDNSCETGGLSATGSVSPT 242
>gi|385654517|gb|AFI62013.1| Hox-C5b [Anguilla japonica]
Length = 240
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 58/79 (73%), Positives = 66/79 (83%), Gaps = 5/79 (6%)
Query: 227 PLYPWMRS-----QFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQ 281
P+YPWM + + KR R +YTRYQTLELEKEFHFNRYLTRRRRIEIA++LCL ERQ
Sbjct: 157 PIYPWMTKLHMSHESDGKRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANSLCLNERQ 216
Query: 282 IKIWFQNRRMKWKKENKSK 300
IKIWFQNRRMKWKK++K K
Sbjct: 217 IKIWFQNRRMKWKKDSKMK 235
>gi|360043143|emb|CCD78555.1| hox protein Smox1 [Schistosoma mansoni]
Length = 842
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/87 (70%), Positives = 68/87 (78%), Gaps = 6/87 (6%)
Query: 215 QQPNNTSASLPSPLYPWMR-----SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRI 269
+Q N+S S +YPWM ++KR RQTYTRYQTLELEKEFHFN+YLTRRRRI
Sbjct: 549 RQSGNSSES-NVVVYPWMNPKGTDISVDQKRTRQTYTRYQTLELEKEFHFNKYLTRRRRI 607
Query: 270 EIAHALCLTERQIKIWFQNRRMKWKKE 296
EIAH L LTERQIKIWFQNRRMKWKK+
Sbjct: 608 EIAHTLTLTERQIKIWFQNRRMKWKKD 634
>gi|154183796|gb|ABS70739.1| Hoxb8a [Haplochromis burtoni]
Length = 280
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 58/75 (77%), Positives = 66/75 (88%), Gaps = 2/75 (2%)
Query: 225 PSPLYPWMRSQFE--RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQI 282
P+ L+PWMR Q R+RGRQTY+RYQTLELEKEF FN YLTR+RRIE++HAL LTERQ+
Sbjct: 134 PTQLFPWMRPQVAAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALALTERQV 193
Query: 283 KIWFQNRRMKWKKEN 297
KIWFQNRRMKWKKEN
Sbjct: 194 KIWFQNRRMKWKKEN 208
>gi|28629677|gb|AAO43044.1| HoxD8 [Latimeria menadoensis]
Length = 223
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/87 (71%), Positives = 73/87 (83%), Gaps = 3/87 (3%)
Query: 222 ASLPSPLYPWMRSQFE--RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
S PS ++PWMRSQ R+RGRQTY+R+QTLELEKEF FN YLTR+RRIE++H+L LTE
Sbjct: 112 TSSPSQMFPWMRSQAATGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHSLGLTE 171
Query: 280 RQIKIWFQNRRMKWKKENKSKDGGSDA 306
RQIKIWFQNRRMKWKKEN +KD S +
Sbjct: 172 RQIKIWFQNRRMKWKKEN-NKDTFSTS 197
>gi|348517815|ref|XP_003446428.1| PREDICTED: homeobox protein Hox-B8a-like [Oreochromis niloticus]
Length = 280
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 58/75 (77%), Positives = 66/75 (88%), Gaps = 2/75 (2%)
Query: 225 PSPLYPWMRSQFE--RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQI 282
P+ L+PWMR Q R+RGRQTY+RYQTLELEKEF FN YLTR+RRIE++HAL LTERQ+
Sbjct: 134 PTQLFPWMRPQVAAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALALTERQV 193
Query: 283 KIWFQNRRMKWKKEN 297
KIWFQNRRMKWKKEN
Sbjct: 194 KIWFQNRRMKWKKEN 208
>gi|332692524|gb|AEE90200.1| Homeobox C5b [Anguilla anguilla]
Length = 240
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 58/79 (73%), Positives = 66/79 (83%), Gaps = 5/79 (6%)
Query: 227 PLYPWMRS-----QFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQ 281
P+YPWM + + KR R +YTRYQTLELEKEFHFNRYLTRRRRIEIA++LCL ERQ
Sbjct: 157 PIYPWMTKLHMSHESDGKRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANSLCLNERQ 216
Query: 282 IKIWFQNRRMKWKKENKSK 300
IKIWFQNRRMKWKK++K K
Sbjct: 217 IKIWFQNRRMKWKKDSKMK 235
>gi|119370789|sp|Q1KKY1.1|HXB8A_FUGRU RecName: Full=Homeobox protein Hox-B8a
gi|94482795|gb|ABF22413.1| homeobox protein HoxB8a [Takifugu rubripes]
Length = 282
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 58/74 (78%), Positives = 66/74 (89%), Gaps = 1/74 (1%)
Query: 225 PSPLYPWMRSQFE-RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIK 283
P+ L+PWMR Q R+RGRQTY+RYQTLELEKEF FN YLTR+RRIE++HAL LTERQ+K
Sbjct: 134 PTQLFPWMRPQAAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALALTERQVK 193
Query: 284 IWFQNRRMKWKKEN 297
IWFQNRRMKWKKEN
Sbjct: 194 IWFQNRRMKWKKEN 207
>gi|123204519|gb|ABM73573.1| homeodomain protein [Megalobrama amblycephala]
Length = 201
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 58/78 (74%), Positives = 67/78 (85%), Gaps = 8/78 (10%)
Query: 228 LYPWMRSQ--------FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
+YPWM+ +R+RGRQTY+RYQTLELEKEFH+NRYLTRRRRIEIA+ALCL+E
Sbjct: 120 IYPWMQRMNSHRVGYGSDRRRGRQTYSRYQTLELEKEFHYNRYLTRRRRIEIANALCLSE 179
Query: 280 RQIKIWFQNRRMKWKKEN 297
RQIKIWFQNRRMKWKKE+
Sbjct: 180 RQIKIWFQNRRMKWKKES 197
>gi|57164349|ref|NP_001009335.1| homeobox protein Hox-C6 [Ovis aries]
gi|338726316|ref|XP_003365299.1| PREDICTED: homeobox protein Hox-C6-like isoform 2 [Equus caballus]
gi|410964587|ref|XP_003988835.1| PREDICTED: homeobox protein Hox-C6 isoform 2 [Felis catus]
gi|1708358|sp|P49925.1|HXC6_SHEEP RecName: Full=Homeobox protein Hox-C6
gi|988252|gb|AAA75473.1| Hox C6 [Ovis aries]
Length = 153
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/90 (68%), Positives = 71/90 (78%), Gaps = 11/90 (12%)
Query: 217 PNNTSASLPSPLYPWMRSQ---------FERKRGRQTYTRYQTLELEKEFHFNRYLTRRR 267
P + AS+ +YPWM+ +R+RGRQ Y+RYQTLELEKEFHFNRYLTRRR
Sbjct: 31 PQDQKASIQ--IYPWMQRMNSHSGVGYGADRRRGRQIYSRYQTLELEKEFHFNRYLTRRR 88
Query: 268 RIEIAHALCLTERQIKIWFQNRRMKWKKEN 297
RIEIA+ALCLTERQIKIWFQNRRMKWKKE+
Sbjct: 89 RIEIANALCLTERQIKIWFQNRRMKWKKES 118
>gi|30352208|gb|AAP31867.1| Hox-B, partial [Rattus sp.]
Length = 60
Score = 129 bits (324), Expect = 2e-27, Method: Composition-based stats.
Identities = 59/60 (98%), Positives = 60/60 (100%)
Query: 238 RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 297
RKRGRQTYTRYQTLELEKEFH+NRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN
Sbjct: 1 RKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 60
>gi|87042409|gb|ABD16213.1| abdominal-A [Strigamia maritima]
Length = 289
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/77 (77%), Positives = 65/77 (84%), Gaps = 4/77 (5%)
Query: 227 PLYPWMR----SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQI 282
P YPWM + R+RGRQTYTR+QTLELEKEFHFN YLTRRRRIEIAHALCLTERQI
Sbjct: 128 PRYPWMSITGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQI 187
Query: 283 KIWFQNRRMKWKKENKS 299
KIWFQNRRMK KKE ++
Sbjct: 188 KIWFQNRRMKLKKEMRA 204
>gi|431822413|ref|NP_001012293.1| homeobox protein Hox-D4 [Gallus gallus]
Length = 237
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/127 (53%), Positives = 78/127 (61%), Gaps = 11/127 (8%)
Query: 183 QQPPPQHHQVVVNHQQTPPNQPPSQPPNQPPNQQPNNTSASLPSPLYPWMR--------- 233
Q PP H H PP QP + P+ ++ P+ +YPWM+
Sbjct: 80 QSAPPSHFPGQAEHCPPPPMSNSRACGQQPALKAPHGSAVKQPAVVYPWMKKVHVNSVNP 139
Query: 234 --SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRM 291
S E KR R YTR Q LELEKEFHFNRYLTRRRRIEIAH LCL+ERQIKIWFQNRRM
Sbjct: 140 NYSGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRM 199
Query: 292 KWKKENK 298
KWKK++K
Sbjct: 200 KWKKDHK 206
>gi|123319|sp|P09080.3|HMB1_TRIGR RecName: Full=Homeobox protein HB1; AltName: Full=TGHBOX1
gi|829232|emb|CAA32660.1| TgHbox1 protein [Tripneustes gratilla]
Length = 307
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 68/88 (77%), Gaps = 7/88 (7%)
Query: 229 YPWM-------RSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQ 281
YPWM + RKR RQTYTRYQTLELEKEFHFNRYLTRRRRIE++H L LTERQ
Sbjct: 173 YPWMPVAGPNVGLEVGRKRCRQTYTRYQTLELEKEFHFNRYLTRRRRIELSHLLGLTERQ 232
Query: 282 IKIWFQNRRMKWKKENKSKDGGSDAGSD 309
IKIWFQNRRMK+KKE+K+K+ G D
Sbjct: 233 IKIWFQNRRMKYKKESKNKEEGVSGEGD 260
>gi|123251|sp|P14839.1|HXB6_CHICK RecName: Full=Homeobox protein Hox-B6; AltName: Full=Homeobox
protein Hox-2.2; Short=Ghox-2.2
gi|1334634|emb|CAA34744.1| unnamed protein product [Gallus gallus]
Length = 84
Score = 129 bits (324), Expect = 2e-27, Method: Composition-based stats.
Identities = 58/60 (96%), Positives = 60/60 (100%)
Query: 239 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
+RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAH+LCLTERQIKIWFQNRRMKWKKENK
Sbjct: 8 RRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHSLCLTERQIKIWFQNRRMKWKKENK 67
>gi|28629651|gb|AAO43031.1| HoxB6 [Latimeria menadoensis]
Length = 85
Score = 129 bits (324), Expect = 2e-27, Method: Composition-based stats.
Identities = 58/60 (96%), Positives = 60/60 (100%)
Query: 239 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
+RGRQTYTRYQTLELEKEFHFNRY+TRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK
Sbjct: 8 RRGRQTYTRYQTLELEKEFHFNRYVTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 67
>gi|355747756|gb|EHH52253.1| hypothetical protein EGM_12669 [Macaca fascicularis]
Length = 208
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 57/64 (89%), Positives = 59/64 (92%)
Query: 237 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
E KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+ERQIKIWFQNRRMKWKK+
Sbjct: 132 EGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 191
Query: 297 NKSK 300
NK K
Sbjct: 192 NKLK 195
>gi|256014527|gb|ACU56818.1| HOXB6 [Pantherophis spiloides]
Length = 186
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/85 (71%), Positives = 67/85 (78%), Gaps = 9/85 (10%)
Query: 218 NNTSASLPSPLYPWMR-------SQF--ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRR 268
+N +P+YPWM+ S F +RGRQTYTRYQTLELEKEFHFNRYLTRRRR
Sbjct: 102 DNEDQKCSTPVYPWMQRMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHFNRYLTRRRR 161
Query: 269 IEIAHALCLTERQIKIWFQNRRMKW 293
IEIAHALCLTERQIKIWFQNRR+KW
Sbjct: 162 IEIAHALCLTERQIKIWFQNRRVKW 186
>gi|83318790|emb|CAI91292.1| fushi tarazu [Cupiennius salei]
Length = 178
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/79 (78%), Positives = 66/79 (83%), Gaps = 4/79 (5%)
Query: 224 LPSPLYPWMRSQFER----KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
+ PLYPWM+S + KR RQTYTRYQTLELEKEFHFN+YLTRRRRIEIAH L LTE
Sbjct: 34 ISKPLYPWMKSHGDTTPGPKRSRQTYTRYQTLELEKEFHFNQYLTRRRRIEIAHTLGLTE 93
Query: 280 RQIKIWFQNRRMKWKKENK 298
RQIKIWFQNRRMK KKENK
Sbjct: 94 RQIKIWFQNRRMKAKKENK 112
>gi|195451417|ref|XP_002072909.1| GK13855 [Drosophila willistoni]
gi|194168994|gb|EDW83895.1| GK13855 [Drosophila willistoni]
Length = 384
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/77 (77%), Positives = 64/77 (83%), Gaps = 1/77 (1%)
Query: 221 SASLPSPLYP-WMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
S SL L P W+ + R+RGRQTYTRYQTLELEKEFH N YLTRRRRIE+AHALCLTE
Sbjct: 271 SESLAGSLLPDWLGTNGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTE 330
Query: 280 RQIKIWFQNRRMKWKKE 296
RQIKIWFQNRRMK KKE
Sbjct: 331 RQIKIWFQNRRMKLKKE 347
>gi|214243|gb|AAA49743.1| AC1 protein, partial [Xenopus laevis]
Length = 67
Score = 129 bits (323), Expect = 2e-27, Method: Composition-based stats.
Identities = 55/61 (90%), Positives = 60/61 (98%)
Query: 237 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
+R+RGRQ Y+RYQTLELEKEFHFNRYLTRRRRIEIA+ALCLTERQIKIWFQNRRMKWKKE
Sbjct: 7 DRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 66
Query: 297 N 297
+
Sbjct: 67 S 67
>gi|291389286|ref|XP_002711077.1| PREDICTED: homeobox C9-like [Oryctolagus cuniculus]
Length = 463
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/79 (74%), Positives = 66/79 (83%), Gaps = 9/79 (11%)
Query: 228 LYPWMRSQ---------FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWM+ +R+RGRQ Y+RYQTLELEKEFHFNRYLTRRRRIEIA+ALCLT
Sbjct: 350 IYPWMQRMNSHSGVGYGADRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLT 409
Query: 279 ERQIKIWFQNRRMKWKKEN 297
ERQIKIWFQNRRMKWKKE+
Sbjct: 410 ERQIKIWFQNRRMKWKKES 428
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 50/60 (83%), Positives = 56/60 (93%)
Query: 238 RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 297
R+ GRQTY+RYQTLELEKEF FN YLTR+RRIE++HAL LTERQ+KIWFQNRRMKWKKEN
Sbjct: 183 RRSGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKEN 242
>gi|405976604|gb|EKC41105.1| Homeobox protein Hox-B7 [Crassostrea gigas]
Length = 208
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/77 (77%), Positives = 65/77 (84%), Gaps = 7/77 (9%)
Query: 228 LYPWMRSQ-------FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTER 280
++PWM S +E+KR RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAH L LTER
Sbjct: 97 VFPWMGSTINGAEVTYEQKRTRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHLLGLTER 156
Query: 281 QIKIWFQNRRMKWKKEN 297
QIKIWFQNRRMKWKK+N
Sbjct: 157 QIKIWFQNRRMKWKKDN 173
>gi|833751|gb|AAA68461.1| putative, partial [Junonia coenia]
Length = 58
Score = 129 bits (323), Expect = 2e-27, Method: Composition-based stats.
Identities = 58/58 (100%), Positives = 58/58 (100%)
Query: 238 RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKK 295
RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKK
Sbjct: 1 RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKK 58
>gi|165873669|gb|ABY67959.1| lox2 hox protein [Capitella teleta]
gi|443711119|gb|ELU05026.1| hypothetical protein CAPTEDRAFT_225442 [Capitella teleta]
Length = 254
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/79 (74%), Positives = 66/79 (83%), Gaps = 4/79 (5%)
Query: 222 ASLPSPLYPWMR----SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 277
A + P+YPWM + +R+RGRQTYTRYQTLELEKEF FNRYLTRRRRIE++H LCL
Sbjct: 150 AGMNGPMYPWMSIVGPNSNQRRRGRQTYTRYQTLELEKEFKFNRYLTRRRRIELSHMLCL 209
Query: 278 TERQIKIWFQNRRMKWKKE 296
TERQIKIWFQNRRMK KKE
Sbjct: 210 TERQIKIWFQNRRMKEKKE 228
>gi|119614280|gb|EAW93874.1| homeobox A6, isoform CRA_a [Homo sapiens]
Length = 94
Score = 129 bits (323), Expect = 2e-27, Method: Composition-based stats.
Identities = 60/71 (84%), Positives = 64/71 (90%)
Query: 239 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
+RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIA+ALCLTERQIKIWFQNRRMKWKKENK
Sbjct: 17 RRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKENK 76
Query: 299 SKDGGSDAGSD 309
+ +G D
Sbjct: 77 LINSTQPSGED 87
>gi|255742448|gb|ACU32562.1| homeobox protein HoxB8 [Callorhinchus milii]
gi|387915250|gb|AFK11234.1| homeobox protein HoxB8 [Callorhinchus milii]
Length = 236
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/78 (75%), Positives = 68/78 (87%), Gaps = 2/78 (2%)
Query: 222 ASLPSPLYPWMRSQFE--RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
+S P+ L+PWMR Q R+RGRQTY+RYQTLELEKEF FN YLTR+RRIE++HAL LTE
Sbjct: 129 SSSPTQLFPWMRPQVAGGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTE 188
Query: 280 RQIKIWFQNRRMKWKKEN 297
RQ+KIWFQNRRMKWKKEN
Sbjct: 189 RQVKIWFQNRRMKWKKEN 206
>gi|354474845|ref|XP_003499640.1| PREDICTED: hypothetical protein LOC100761150 [Cricetulus griseus]
Length = 364
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 58/74 (78%), Positives = 66/74 (89%), Gaps = 1/74 (1%)
Query: 225 PSPLYPWMRSQFE-RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIK 283
P+ L+PWMR Q R+RGRQTY+RYQTLELEKEF FN YLTR+RRIE++HAL LTERQ+K
Sbjct: 252 PTQLFPWMRPQAAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVK 311
Query: 284 IWFQNRRMKWKKEN 297
IWFQNRRMKWKKEN
Sbjct: 312 IWFQNRRMKWKKEN 325
>gi|332692486|gb|AEE90166.1| Homeobox B8a [Anguilla anguilla]
gi|385654477|gb|AFI61978.1| Hox-B8a [Anguilla japonica]
Length = 248
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 58/75 (77%), Positives = 66/75 (88%), Gaps = 2/75 (2%)
Query: 225 PSPLYPWMRSQFE--RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQI 282
P+ L+PWMR Q R+RGRQTY+RYQTLELEKEF FN YLTR+RRIE++HAL LTERQ+
Sbjct: 133 PTQLFPWMRPQVAAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQV 192
Query: 283 KIWFQNRRMKWKKEN 297
KIWFQNRRMKWKKEN
Sbjct: 193 KIWFQNRRMKWKKEN 207
>gi|5163354|gb|AAD40645.1|AF144889_1 HB2 homeodomain protein [Priapulus caudatus]
Length = 77
Score = 129 bits (323), Expect = 3e-27, Method: Composition-based stats.
Identities = 58/64 (90%), Positives = 62/64 (96%)
Query: 237 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
+RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIA+ LCLTERQIKIWFQNRRMKWKKE
Sbjct: 1 DRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIANMLCLTERQIKIWFQNRRMKWKKE 60
Query: 297 NKSK 300
K++
Sbjct: 61 CKAR 64
>gi|255755649|dbj|BAH96550.1| homeodomain transcription factor [Balanoglossus simodensis]
Length = 248
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 63/97 (64%), Positives = 74/97 (76%), Gaps = 10/97 (10%)
Query: 225 PSPLYPWMRS----QFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTER 280
P+ LYPW+ + + +KR RQTYTRYQTLELEKEFH+NRYLTRRRRIE++H L LTER
Sbjct: 132 PTTLYPWVNAAGMPEVPKKRCRQTYTRYQTLELEKEFHYNRYLTRRRRIELSHLLGLTER 191
Query: 281 QIKIWFQNRRMKWKKENKSKDGGSDAGSDITPATSPQ 317
QIKIWFQNRRMK+KKE+K D S+IT T Q
Sbjct: 192 QIKIWFQNRRMKYKKESKKDD------SEITSDTQNQ 222
>gi|213511933|ref|NP_001133020.1| homeobox protein HoxC5bb [Salmo salar]
gi|157815999|gb|ABV82018.1| homeobox protein HoxC5bb [Salmo salar]
gi|158702359|gb|ABW77547.1| homeobox protein HoxC5bb [Salmo salar]
Length = 240
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 58/78 (74%), Positives = 64/78 (82%), Gaps = 5/78 (6%)
Query: 228 LYPWMRS-----QFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQI 282
+YPWM + + KR R +YTRYQTLELEKEFHFNRYLTRRRRIEIAH LCL ERQI
Sbjct: 158 IYPWMTKLHMGHEADGKRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHTLCLNERQI 217
Query: 283 KIWFQNRRMKWKKENKSK 300
KIWFQNRRMKWKK++K K
Sbjct: 218 KIWFQNRRMKWKKDSKLK 235
>gi|350405522|ref|XP_003487461.1| PREDICTED: homeotic protein ultrabithorax-like [Bombus impatiens]
Length = 317
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/98 (66%), Positives = 71/98 (72%), Gaps = 9/98 (9%)
Query: 202 NQPPSQPPNQPPNQQPNNTSASLPSPLYPWMR---SQFERKRGRQTYTRYQTLELEKEFH 258
N SQP +QQP N + YPWM + R+RGRQTYTRYQTLELEKEFH
Sbjct: 198 NSSASQPVATQLHQQPTNHT------FYPWMAIAGANGMRRRGRQTYTRYQTLELEKEFH 251
Query: 259 FNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
N YLTRRRRIE+AH+LCLTERQIKIWFQNRRMK KKE
Sbjct: 252 TNHYLTRRRRIEMAHSLCLTERQIKIWFQNRRMKLKKE 289
>gi|255742463|gb|ACU32576.1| homeobox protein HoxC5 [Callorhinchus milii]
Length = 231
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 59/85 (69%), Positives = 65/85 (76%), Gaps = 9/85 (10%)
Query: 228 LYPWMR---------SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWM S+ E +R R YTRYQTLELEKEFHFNRYLTRRRR+EIA LCL
Sbjct: 145 IYPWMTKVHLSHDALSKAEGRRSRTCYTRYQTLELEKEFHFNRYLTRRRRLEIASNLCLN 204
Query: 279 ERQIKIWFQNRRMKWKKENKSKDGG 303
ERQIKIWFQNRRMKWKK+ K+K GG
Sbjct: 205 ERQIKIWFQNRRMKWKKDTKTKSGG 229
>gi|34398401|gb|AAQ67269.1| ultrabithorax [Drosophila virilis]
Length = 387
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/77 (77%), Positives = 64/77 (83%), Gaps = 1/77 (1%)
Query: 221 SASLPSPLYP-WMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
S SL L P W+ + R+RGRQTYTRYQTLELEKEFH N YLTRRRRIE+AHALCLTE
Sbjct: 274 SESLAGSLLPDWLGTNGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTE 333
Query: 280 RQIKIWFQNRRMKWKKE 296
RQIKIWFQNRRMK KKE
Sbjct: 334 RQIKIWFQNRRMKLKKE 350
>gi|3891759|pdb|9ANT|A Chain A, Antennapedia Homeodomain-Dna Complex
gi|3891760|pdb|9ANT|B Chain B, Antennapedia Homeodomain-Dna Complex
Length = 62
Score = 128 bits (322), Expect = 3e-27, Method: Composition-based stats.
Identities = 60/61 (98%), Positives = 60/61 (98%)
Query: 237 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHAL LTERQIKIWFQNRRMKWKKE
Sbjct: 2 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALSLTERQIKIWFQNRRMKWKKE 61
Query: 297 N 297
N
Sbjct: 62 N 62
>gi|151935665|gb|ABS18814.1| Hox8 [Flaccisagitta enflata]
Length = 301
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/74 (81%), Positives = 62/74 (83%), Gaps = 3/74 (4%)
Query: 221 SASLPSPLYPWMRSQFE---RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 277
S P+P YPWM RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIE+AHALCL
Sbjct: 184 SGGPPTPFYPWMSLAGVNSPRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEMAHALCL 243
Query: 278 TERQIKIWFQNRRM 291
TERQIKIWFQNRRM
Sbjct: 244 TERQIKIWFQNRRM 257
>gi|86515340|ref|NP_001034497.1| ultrabithorax [Tribolium castaneum]
gi|18535622|gb|AAL71874.1| ultrabithorax [Tribolium castaneum]
gi|270002802|gb|EEZ99249.1| ultrabithorax [Tribolium castaneum]
Length = 314
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/103 (64%), Positives = 71/103 (68%), Gaps = 15/103 (14%)
Query: 202 NQPPSQPPNQPPNQQPNNTSASLPSPLYPWMR--------SQFERKRGRQTYTRYQTLEL 253
N SQP +QQ N+T YPWM + R+RGRQTYTRYQTLEL
Sbjct: 186 NSTSSQPVGTQIHQQTNHT-------FYPWMAIADSMTFGANGLRRRGRQTYTRYQTLEL 238
Query: 254 EKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
EKEFH N YLTRRRRIE+AHALCLTERQIKIWFQNRRMK KKE
Sbjct: 239 EKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKKE 281
>gi|332024142|gb|EGI64358.1| Homeotic protein ultrabithorax [Acromyrmex echinatior]
Length = 331
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/98 (66%), Positives = 70/98 (71%), Gaps = 8/98 (8%)
Query: 202 NQPPSQPPNQPPNQQPNNTSASLPSPLYPWMR---SQFERKRGRQTYTRYQTLELEKEFH 258
N SQP +QQP + YPWM + R+RGRQTYTRYQTLELEKEFH
Sbjct: 198 NSSASQPVATQLHQQPTSNHT-----FYPWMAIAGANGMRRRGRQTYTRYQTLELEKEFH 252
Query: 259 FNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
N YLTRRRRIE+AHALCLTERQIKIWFQNRRMK KKE
Sbjct: 253 TNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKKE 290
>gi|359754118|gb|AEV59538.1| HOXD4 [Macropus eugenii]
Length = 238
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/126 (55%), Positives = 83/126 (65%), Gaps = 16/126 (12%)
Query: 200 PPNQPPSQPPNQPPN--QQPNNTSASLPSPLYPWMR-----------SQFERKRGRQTYT 246
PP P S+ +Q + Q PN T+ P+ +YPWM+ + E KR R YT
Sbjct: 96 PPPIPSSRACSQSASLKQPPNGTALKQPAVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYT 155
Query: 247 RYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK---SKDGG 303
R Q LELEKEFHFNRYLTRRRRIEIAH LCL+ERQIKIWFQNRRMKWKK++K +K
Sbjct: 156 RQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHKLPNTKGRS 215
Query: 304 SDAGSD 309
S A S+
Sbjct: 216 SSAASN 221
>gi|387231807|gb|AFJ72614.1| homeobox C6, partial [Tylonycteris pachypus]
gi|387231809|gb|AFJ72615.1| homeobox C6, partial [Miniopterus schreibersii]
gi|387231811|gb|AFJ72616.1| homeobox C6, partial [Miniopterus schreibersii]
gi|387231813|gb|AFJ72617.1| homeobox C6, partial [Rhinolophus macrotis]
gi|387231815|gb|AFJ72618.1| homeobox C6, partial [Hipposideros armiger]
gi|387231817|gb|AFJ72619.1| homeobox C6, partial [Rhinolophus paradoxolophus]
gi|387231819|gb|AFJ72620.1| homeobox C6, partial [Rhinolophus rex]
gi|387231821|gb|AFJ72621.1| homeobox C6, partial [Taphozous melanopogon]
gi|387231825|gb|AFJ72623.1| homeobox C6, partial [Ia io]
gi|387231827|gb|AFJ72624.1| homeobox C6, partial [Cynopterus sphinx]
gi|387231829|gb|AFJ72625.1| homeobox C6, partial [Chaerephon plicatus]
gi|387231831|gb|AFJ72626.1| homeobox C6, partial [Nyctalus noctula]
gi|387231833|gb|AFJ72627.1| homeobox C6, partial [Myotis laniger]
gi|387231837|gb|AFJ72629.1| homeobox C6, partial [Rhinolophus pusillus]
gi|387231839|gb|AFJ72630.1| homeobox C6, partial [Hipposideros pomona]
gi|387231841|gb|AFJ72631.1| homeobox C6, partial [Rousettus leschenaultii]
gi|387231843|gb|AFJ72632.1| homeobox C6, partial [Rhinolophus sinicus]
gi|387231847|gb|AFJ72634.1| homeobox C6, partial [Hipposideros larvatus]
Length = 101
Score = 128 bits (322), Expect = 3e-27, Method: Composition-based stats.
Identities = 55/61 (90%), Positives = 60/61 (98%)
Query: 237 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
+R+RGRQ Y+RYQTLELEKEFHFNRYLTRRRRIEIA+ALCLTERQIKIWFQNRRMKWKKE
Sbjct: 6 DRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 65
Query: 297 N 297
+
Sbjct: 66 S 66
>gi|3420830|gb|AAC31942.1| Ultrabithorax homeotic protein IIa [Anopheles gambiae]
Length = 327
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/77 (77%), Positives = 64/77 (83%), Gaps = 1/77 (1%)
Query: 221 SASLPSPLYP-WMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
S SL L P W+ + R+RGRQTYTRYQTLELEKEFH N YLTRRRRIE+AHALCLTE
Sbjct: 218 SESLAGTLLPDWIGANGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTE 277
Query: 280 RQIKIWFQNRRMKWKKE 296
RQIKIWFQNRRMK KKE
Sbjct: 278 RQIKIWFQNRRMKLKKE 294
>gi|332692496|gb|AEE90175.1| Homeobox B8b [Anguilla anguilla]
gi|385654489|gb|AFI61988.1| Hox-B8b [Anguilla japonica]
Length = 248
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 58/75 (77%), Positives = 66/75 (88%), Gaps = 2/75 (2%)
Query: 225 PSPLYPWMRSQFE--RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQI 282
P+ L+PWMR Q R+RGRQTY+RYQTLELEKEF FN YLTR+RRIE++HAL LTERQ+
Sbjct: 132 PTQLFPWMRPQVAAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQV 191
Query: 283 KIWFQNRRMKWKKEN 297
KIWFQNRRMKWKKEN
Sbjct: 192 KIWFQNRRMKWKKEN 206
>gi|348517907|ref|XP_003446474.1| PREDICTED: homeobox protein Hox-B7-like [Oreochromis niloticus]
Length = 233
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 62/96 (64%), Positives = 77/96 (80%), Gaps = 5/96 (5%)
Query: 203 QPPSQPPNQPPNQQPNNTSASLPSPLYPWMRSQ-FERKRGRQTYTRYQTLELEKEFHFNR 261
+P S+ + P ++ N+ + YPWM+S +R+RGRQTYTR+Q+LELEKEFHFNR
Sbjct: 124 EPTSRRQSSPDKRRLNHGRLCI----YPWMKSSGSDRRRGRQTYTRHQSLELEKEFHFNR 179
Query: 262 YLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 297
YLTR+R+IE+AHAL LTERQIKIWFQNRRMKWKKEN
Sbjct: 180 YLTRKRQIEVAHALGLTERQIKIWFQNRRMKWKKEN 215
>gi|213512948|ref|NP_001133051.1| homeobox protein HoxB8ab [Salmo salar]
gi|157816103|gb|ABV82070.1| homeobox protein HoxB8ab [Salmo salar]
gi|158702277|gb|ABW77475.1| homeobox protien HoxB8ab [Salmo salar]
Length = 246
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 58/75 (77%), Positives = 66/75 (88%), Gaps = 2/75 (2%)
Query: 225 PSPLYPWMRSQFE--RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQI 282
P+ L+PWMR Q R+RGRQTY+RYQTLELEKEF FN YLTR+RRIE++HAL LTERQ+
Sbjct: 131 PTQLFPWMRPQLAAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQV 190
Query: 283 KIWFQNRRMKWKKEN 297
KIWFQNRRMKWKKEN
Sbjct: 191 KIWFQNRRMKWKKEN 205
>gi|239950180|gb|ACS36775.1| abd-A [Artemia franciscana]
Length = 258
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/77 (79%), Positives = 65/77 (84%), Gaps = 4/77 (5%)
Query: 227 PLYPWMR----SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQI 282
P YPWM + R+RGRQTYTRYQTLELEKEFHFN YLTRRRRIEIAHALCLTERQI
Sbjct: 110 PRYPWMSITGPNGCPRRRGRQTYTRYQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQI 169
Query: 283 KIWFQNRRMKWKKENKS 299
KIWFQNRRMK KKE ++
Sbjct: 170 KIWFQNRRMKLKKELRA 186
>gi|195389682|ref|XP_002053505.1| ultrabithorax [Drosophila virilis]
gi|194151591|gb|EDW67025.1| ultrabithorax [Drosophila virilis]
Length = 378
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/77 (77%), Positives = 64/77 (83%), Gaps = 1/77 (1%)
Query: 221 SASLPSPLYP-WMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
S SL L P W+ + R+RGRQTYTRYQTLELEKEFH N YLTRRRRIE+AHALCLTE
Sbjct: 265 SESLAGSLLPDWLGTNGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTE 324
Query: 280 RQIKIWFQNRRMKWKKE 296
RQIKIWFQNRRMK KKE
Sbjct: 325 RQIKIWFQNRRMKLKKE 341
>gi|2708303|gb|AAB92412.1| ultrabithorax [Acanthokara kaputensis]
Length = 214
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/79 (77%), Positives = 65/79 (82%), Gaps = 4/79 (5%)
Query: 222 ASLPSPLYPWMRSQ----FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 277
+S +P YPWM +RKRGRQTYTRYQTLELEKEFH N YLTRRRRIE+AHALCL
Sbjct: 115 SSETTPFYPWMNVAGANGLQRKRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCL 174
Query: 278 TERQIKIWFQNRRMKWKKE 296
TERQIKIWFQNRRMK KKE
Sbjct: 175 TERQIKIWFQNRRMKLKKE 193
>gi|194742544|ref|XP_001953761.1| GF17924 [Drosophila ananassae]
gi|190626798|gb|EDV42322.1| GF17924 [Drosophila ananassae]
Length = 391
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/77 (77%), Positives = 64/77 (83%), Gaps = 1/77 (1%)
Query: 221 SASLPSPLYP-WMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
S SL L P W+ + R+RGRQTYTRYQTLELEKEFH N YLTRRRRIE+AHALCLTE
Sbjct: 278 SESLAGSLLPDWLGTNGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTE 337
Query: 280 RQIKIWFQNRRMKWKKE 296
RQIKIWFQNRRMK KKE
Sbjct: 338 RQIKIWFQNRRMKLKKE 354
>gi|42734369|ref|NP_571195.1| homeobox protein Hox-B8a [Danio rerio]
gi|60392412|sp|Q8AWZ0.1|HXB8A_DANRE RecName: Full=Homeobox protein Hox-B8a; Short=Hox-B8
gi|26984634|emb|CAD59111.1| SI:dZ254O17.1 (homeo box protein B8a) [Danio rerio]
gi|31419284|gb|AAH53287.1| Homeo box B8a [Danio rerio]
Length = 245
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/84 (72%), Positives = 71/84 (84%), Gaps = 2/84 (2%)
Query: 216 QPNNTSAS-LPSPLYPWMRSQFE-RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAH 273
+ +NT S P+ L+PWMR Q R+RGRQTY+RYQTLELEKEF FN YLTR+RRIE++H
Sbjct: 121 ETDNTEQSPSPTQLFPWMRPQAAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSH 180
Query: 274 ALCLTERQIKIWFQNRRMKWKKEN 297
AL LTERQ+KIWFQNRRMKWKKEN
Sbjct: 181 ALGLTERQVKIWFQNRRMKWKKEN 204
>gi|297264383|ref|XP_001095080.2| PREDICTED: hypothetical protein LOC701064 [Macaca mulatta]
Length = 3029
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 58/78 (74%), Positives = 68/78 (87%), Gaps = 2/78 (2%)
Query: 222 ASLPSPLYPWMRSQFE--RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
+S PS ++PWMR Q R+RGRQTY+R+QTLELEKEF FN YLTR+RRIE++HAL LTE
Sbjct: 520 SSSPSQMFPWMRPQAAPGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALALTE 579
Query: 280 RQIKIWFQNRRMKWKKEN 297
RQ+KIWFQNRRMKWKKEN
Sbjct: 580 RQVKIWFQNRRMKWKKEN 597
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/97 (62%), Positives = 69/97 (71%), Gaps = 11/97 (11%)
Query: 213 PNQQPNNTSASLPSPLYPWMR-----------SQFERKRGRQTYTRYQTLELEKEFHFNR 261
P Q P T+ P+ +YPWM+ + E KR R YTR Q LELEKEFHFNR
Sbjct: 1236 PKQPPPGTALKQPAVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNR 1295
Query: 262 YLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
YLTRRRRIEIAH LCL+ERQIKIWFQNRRMKWKK++K
Sbjct: 1296 YLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 1332
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 71/126 (56%), Gaps = 32/126 (25%)
Query: 205 PSQPPNQPPNQQPNNTSASLPSPLYPWMRSQFE--------------------------- 237
P++ P PN +++SA++ ++PWM+ +
Sbjct: 2064 PAKKPKGGPNA--SSSSATISKQIFPWMKESRQNSKQKNSCRPPSLPPCPGESCEDKSPP 2121
Query: 238 ---RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWK 294
KR R YT Q +ELEKEFHFNRYL R RR+E+A+ L LTERQIKIWFQNRRMK+K
Sbjct: 2122 GPASKRVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYK 2181
Query: 295 KENKSK 300
K+ K+K
Sbjct: 2182 KDQKAK 2187
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 43/57 (75%)
Query: 242 RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
R ++ Q ELEKEFHFN+YLTR RRIEIA+ L L + Q+KIWFQNRRMK KK +
Sbjct: 2934 RTNFSTKQLTELEKEFHFNKYLTRARRIEIANCLQLNDTQVKIWFQNRRMKQKKRER 2990
>gi|58382031|ref|XP_311623.2| AGAP004661-PA [Anopheles gambiae str. PEST]
gi|55242655|gb|EAA45000.2| AGAP004661-PA [Anopheles gambiae str. PEST]
Length = 327
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 60/77 (77%), Positives = 64/77 (83%), Gaps = 1/77 (1%)
Query: 221 SASLPSPLYP-WMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
S SL L P W+ + R+RGRQTYTRYQTLELEKEFH N YLTRRRRIE+AHALCLTE
Sbjct: 218 SESLAGTLLPDWIGANGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTE 277
Query: 280 RQIKIWFQNRRMKWKKE 296
RQIKIWFQNRRMK KKE
Sbjct: 278 RQIKIWFQNRRMKLKKE 294
>gi|3445428|emb|CAA07498.1| homeobox protein [Cupiennius salei]
Length = 263
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 62/96 (64%), Positives = 70/96 (72%), Gaps = 11/96 (11%)
Query: 214 NQQPNNTSASLPSPLYPWMRSQ-----------FERKRGRQTYTRYQTLELEKEFHFNRY 262
+ Q ++ S S P +YPWM+ E KR R YTR+Q LELEKEFHFNRY
Sbjct: 99 DTQGSDCSGSEPPVIYPWMKKVHSNPVNGSFPGIEPKRQRTAYTRHQILELEKEFHFNRY 158
Query: 263 LTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
LTRRRRIEIAHALCL+ERQIKIWFQNRRMKWKK+NK
Sbjct: 159 LTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNK 194
>gi|18858853|ref|NP_571605.1| homeobox protein Hox-C6b [Danio rerio]
gi|60392445|sp|Q9PWM5.1|HXC6B_DANRE RecName: Full=Homeobox protein Hox-C6b
gi|4322100|gb|AAD15959.1| homeobox protein [Danio rerio]
Length = 227
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 59/89 (66%), Positives = 69/89 (77%), Gaps = 8/89 (8%)
Query: 228 LYPWMRSQ--------FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
+YPWM+ +R+RGRQ Y+RYQTLELEKEFH+NRYLTRRRRIEIA+ LCL+E
Sbjct: 117 IYPWMQRMNSHRVGYGSDRRRGRQIYSRYQTLELEKEFHYNRYLTRRRRIEIANTLCLSE 176
Query: 280 RQIKIWFQNRRMKWKKENKSKDGGSDAGS 308
RQIKIWFQNRRMKWKKE+ +D GS
Sbjct: 177 RQIKIWFQNRRMKWKKESNLTSILNDNGS 205
>gi|301128902|emb|CBL59364.1| HoxD4 [Scyliorhinus canicula]
Length = 240
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/112 (58%), Positives = 76/112 (67%), Gaps = 13/112 (11%)
Query: 198 QTPPNQPPSQPPNQPPNQQPNNTSASLPSPLYPWMR-----------SQFERKRGRQTYT 246
Q +P SQ + P NQ N T+ P+ +YPWM+ + E KR R YT
Sbjct: 98 QVSIGRPCSQQQHNPKNQ--NGTATKQPAVVYPWMKKVHVNTVNPNYTGGEPKRSRTAYT 155
Query: 247 RYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
R Q LELEKEFHFNRYLTRRRRIEIAH LCL+ERQIKIWFQNRRMKWKK++K
Sbjct: 156 RQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 207
>gi|8650523|gb|AAF78248.1|AF275310_1 Hox5 [Haliotis rufescens]
Length = 281
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 64/94 (68%), Positives = 74/94 (78%), Gaps = 9/94 (9%)
Query: 214 NQQPNNTSASLPSP-LYPWMR--------SQFERKRGRQTYTRYQTLELEKEFHFNRYLT 264
NQ P++ S + P P +YPWMR + E KR R +YTR+QTLELEKEFH+N+YLT
Sbjct: 163 NQNPSHRSENFPPPQIYPWMRRMQYSSDGNDGETKRSRTSYTRHQTLELEKEFHYNKYLT 222
Query: 265 RRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
RRRRIEIAHAL LTERQIKIWFQNRRMKWKKE+K
Sbjct: 223 RRRRIEIAHALNLTERQIKIWFQNRRMKWKKEHK 256
>gi|20070052|gb|AAM09103.1| homeobox protein HoxL6 [Lampetra fluviatilis]
Length = 87
Score = 128 bits (321), Expect = 4e-27, Method: Composition-based stats.
Identities = 57/61 (93%), Positives = 61/61 (100%)
Query: 237 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
+R+RGRQTY+RYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE
Sbjct: 7 DRRRGRQTYSRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 66
Query: 297 N 297
+
Sbjct: 67 H 67
>gi|220898205|gb|ACL81459.1| HoxC4 [Latimeria menadoensis]
Length = 260
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 68/113 (60%), Positives = 79/113 (69%), Gaps = 14/113 (12%)
Query: 199 TPPNQPPSQPP--NQPPNQQPNNTSASLPSPLYPWMRSQF-----------ERKRGRQTY 245
TP N PP NQP +QPNNT++ P +YPWM+ E KR R Y
Sbjct: 103 TPSNTTSPAPPSCNQPNTEQPNNTTSKQPV-VYPWMKKIHVSTVNPNYNGGEPKRSRTAY 161
Query: 246 TRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
TR Q LELEKEFH+NRYLTRRRRIEIAH+LCL+ERQIKIWFQNRRMKWKK+++
Sbjct: 162 TRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKKDHR 214
>gi|328480244|gb|AEB15973.1| ultrabithorax isoform IV [Oncopeltus fasciatus]
Length = 295
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 69/118 (58%), Positives = 74/118 (62%), Gaps = 17/118 (14%)
Query: 182 AQQPPPQHHQVVVNHQQTPPNQPPSQPPNQPPNQQPNNTSASLPSPLYPWMR---SQFER 238
A P +Q +N T QP Q QP N YPWM + R
Sbjct: 160 ASLAPASWNQCSLN---TTATQPAGQLHQQPANH-----------TFYPWMAIAGANGLR 205
Query: 239 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
+RGRQTYTRYQTLELEKEFH N YLTRRRRIE+AHALCLTERQIKIWFQNRRMK KKE
Sbjct: 206 RRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKKE 263
>gi|405976601|gb|EKC41102.1| Homeobox protein LOX2 [Crassostrea gigas]
Length = 277
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 60/102 (58%), Positives = 75/102 (73%), Gaps = 4/102 (3%)
Query: 214 NQQPNNTSASLPSPLYPWMR----SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRI 269
N + + S P+P YPWM + R+RGRQTY+RYQTLELEKEF FN YLTR+RRI
Sbjct: 159 NMKSDQNSGEQPTPFYPWMGIVGPNSAHRRRGRQTYSRYQTLELEKEFQFNHYLTRKRRI 218
Query: 270 EIAHALCLTERQIKIWFQNRRMKWKKENKSKDGGSDAGSDIT 311
E+AH+LCLTERQIKIWFQNRRMK KKE ++ +D + ++
Sbjct: 219 EVAHSLCLTERQIKIWFQNRRMKLKKERQAIKEINDNSTLLS 260
>gi|327275820|ref|XP_003222670.1| PREDICTED: homeobox protein Hox-B8-like [Anolis carolinensis]
Length = 244
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 58/75 (77%), Positives = 66/75 (88%), Gaps = 2/75 (2%)
Query: 225 PSPLYPWMRSQFE--RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQI 282
P+ L+PWMR Q R+RGRQTY+RYQTLELEKEF FN YLTR+RRIE++HAL LTERQ+
Sbjct: 132 PTQLFPWMRPQAAAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQV 191
Query: 283 KIWFQNRRMKWKKEN 297
KIWFQNRRMKWKKEN
Sbjct: 192 KIWFQNRRMKWKKEN 206
>gi|45382501|ref|NP_990242.1| homeobox B8 [Gallus gallus]
gi|4099016|gb|AAD09228.1| Hoxb-8 [Gallus gallus]
Length = 241
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/185 (41%), Positives = 99/185 (53%), Gaps = 10/185 (5%)
Query: 119 YASCKLQAAVGN--GIIPGPESPNDLVDPTLNNHHHHQHHHMNHHPHP-HPQQQQPQQPP 175
Y C +G ++ GP + PT +H ++ P+ +P P
Sbjct: 23 YYDCGFAQDLGGRPTVVYGPSTGGTFQHPTQIQEFYHGASSLSSSPYQQNPCAVACHGDP 82
Query: 176 PQHMMYAQQPPPQHHQVVVNHQQTPPNQPPSQPPNQPPNQQPNNTSASLPSP--LYPWMR 233
Y P Q + + Q++ Q + +S PSP L+PWMR
Sbjct: 83 SNFYGY----DPLQRQSLFSAQESDLVQYTDCKLAASGLGEEAESSEQSPSPTQLFPWMR 138
Query: 234 SQFE-RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMK 292
Q R+RGRQTY+RYQTLELEKEF FN YLTR+RRIE++HAL LTERQ+KIWFQNRRMK
Sbjct: 139 PQAAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMK 198
Query: 293 WKKEN 297
WKKEN
Sbjct: 199 WKKEN 203
>gi|190339031|gb|AAI63163.1| Hoxc6b protein [Danio rerio]
Length = 228
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 59/90 (65%), Positives = 69/90 (76%), Gaps = 9/90 (10%)
Query: 228 LYPWMRSQ---------FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWM+ +R+RGRQ Y+RYQTLELEKEFH+NRYLTRRRRIEIA+ LCL+
Sbjct: 117 IYPWMQRMNSHSGVGYGSDRRRGRQIYSRYQTLELEKEFHYNRYLTRRRRIEIANTLCLS 176
Query: 279 ERQIKIWFQNRRMKWKKENKSKDGGSDAGS 308
ERQIKIWFQNRRMKWKKE+ +D GS
Sbjct: 177 ERQIKIWFQNRRMKWKKESNLTSILNDNGS 206
>gi|195038397|ref|XP_001990646.1| GH19471 [Drosophila grimshawi]
gi|193894842|gb|EDV93708.1| GH19471 [Drosophila grimshawi]
Length = 382
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 60/77 (77%), Positives = 64/77 (83%), Gaps = 1/77 (1%)
Query: 221 SASLPSPLYP-WMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
S SL L P W+ + R+RGRQTYTRYQTLELEKEFH N YLTRRRRIE+AHALCLTE
Sbjct: 269 SESLAGSLLPDWLGTNGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTE 328
Query: 280 RQIKIWFQNRRMKWKKE 296
RQIKIWFQNRRMK KKE
Sbjct: 329 RQIKIWFQNRRMKLKKE 345
>gi|390351577|ref|XP_793141.2| PREDICTED: homeobox protein Hox-A7-like [Strongylocentrotus
purpuratus]
Length = 308
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 57/76 (75%), Positives = 64/76 (84%), Gaps = 6/76 (7%)
Query: 227 PLYPWMRS------QFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTER 280
P+Y WM+ +RKRGRQTYTR QTLELEKEFH+NRYLTR+RRIEIA A+CL+ER
Sbjct: 189 PVYNWMKIPGTHIIGTDRKRGRQTYTRAQTLELEKEFHYNRYLTRKRRIEIAQAVCLSER 248
Query: 281 QIKIWFQNRRMKWKKE 296
QIKIWFQNRRMKWKKE
Sbjct: 249 QIKIWFQNRRMKWKKE 264
>gi|195389696|ref|XP_002053512.1| GJ23929 [Drosophila virilis]
gi|194151598|gb|EDW67032.1| GJ23929 [Drosophila virilis]
Length = 303
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 57/62 (91%), Positives = 59/62 (95%)
Query: 237 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
E KR R +YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE
Sbjct: 96 ETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 155
Query: 297 NK 298
+K
Sbjct: 156 HK 157
>gi|88604724|gb|ABD46733.1| homeobox protein ultrabithorax [Endeis spinosa]
Length = 273
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 59/75 (78%), Positives = 63/75 (84%), Gaps = 3/75 (4%)
Query: 225 PSPLYPWMR---SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQ 281
P+ YPWM + R+RGRQTYTRYQTLELEKEFH N YLTRRRRIE+AHALCLTERQ
Sbjct: 156 PNSFYPWMALAGANGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQ 215
Query: 282 IKIWFQNRRMKWKKE 296
IKIWFQNRRMK KKE
Sbjct: 216 IKIWFQNRRMKLKKE 230
>gi|119615129|gb|EAW94723.1| homeobox B8, isoform CRA_a [Homo sapiens]
gi|431890745|gb|ELK01624.1| Homeobox protein Hox-B8 [Pteropus alecto]
Length = 242
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 58/74 (78%), Positives = 66/74 (89%), Gaps = 1/74 (1%)
Query: 225 PSPLYPWMRSQFE-RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIK 283
P+ L+PWMR Q R+RGRQTY+RYQTLELEKEF FN YLTR+RRIE++HAL LTERQ+K
Sbjct: 131 PTQLFPWMRPQAAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVK 190
Query: 284 IWFQNRRMKWKKEN 297
IWFQNRRMKWKKEN
Sbjct: 191 IWFQNRRMKWKKEN 204
>gi|224055148|ref|XP_002199292.1| PREDICTED: homeobox protein Hox-D4 [Taeniopygia guttata]
Length = 237
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 65/113 (57%), Positives = 78/113 (69%), Gaps = 14/113 (12%)
Query: 211 QPPNQQPNNTSASLPSPLYPWMR-----------SQFERKRGRQTYTRYQTLELEKEFHF 259
QP + PN ++ P+ +YPWM+ + E KR R YTR Q LELEKEFHF
Sbjct: 108 QPALKPPNGSALKQPAVVYPWMKKVHVNSVNPNYNGGEPKRSRTAYTRQQVLELEKEFHF 167
Query: 260 NRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK---SKDGGSDAGSD 309
NRYLTRRRRIEIAH LCL+ERQIKIWFQNRRMKWKK++K +K S +GS+
Sbjct: 168 NRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHKLPNTKGRSSSSGSN 220
>gi|301614396|ref|XP_002936695.1| PREDICTED: homeobox protein Hox-C5-like [Xenopus (Silurana)
tropicalis]
Length = 224
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 58/82 (70%), Positives = 64/82 (78%), Gaps = 5/82 (6%)
Query: 228 LYPWMRS-----QFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQI 282
+YPWM + + KR R +YTRYQTLELEKEFHFNRYLTRRRRIEIA+ LCL ERQI
Sbjct: 142 IYPWMTKLHMSHETDGKRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQI 201
Query: 283 KIWFQNRRMKWKKENKSKDGGS 304
KIWFQNRRMKWKK+ K K S
Sbjct: 202 KIWFQNRRMKWKKDTKVKSKDS 223
>gi|405109806|emb|CCH51005.1| fushi tarazu, partial [Phalangium opilio]
Length = 281
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 65/98 (66%), Positives = 73/98 (74%), Gaps = 10/98 (10%)
Query: 210 NQPPNQQPNNTSAS------LPSPLYPWMRSQFE----RKRGRQTYTRYQTLELEKEFHF 259
N PP + P+NT+ S + YPWM+S + +KR RQTYTR QTLELEKEFHF
Sbjct: 179 NSPPAKSPSNTAQSPSLETQKTTNFYPWMKSYTDSCQGQKRTRQTYTRIQTLELEKEFHF 238
Query: 260 NRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 297
NRYLTRRRRIEIAH+L LTERQIKIWFQNRRMK KKE
Sbjct: 239 NRYLTRRRRIEIAHSLGLTERQIKIWFQNRRMKAKKET 276
>gi|386781|gb|AAA52681.1| Hu1 gene, partial [Homo sapiens]
Length = 118
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 60/75 (80%), Positives = 63/75 (84%), Gaps = 1/75 (1%)
Query: 239 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+ERQIKIWFQNRRMKWKK+NK
Sbjct: 44 KRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNK 103
Query: 299 SKDGG-SDAGSDITP 312
K + AGS P
Sbjct: 104 LKSMSLATAGSAFQP 118
>gi|30352204|gb|AAP31863.1| Hox-A, partial [Rattus sp.]
Length = 60
Score = 127 bits (320), Expect = 5e-27, Method: Composition-based stats.
Identities = 59/60 (98%), Positives = 60/60 (100%)
Query: 238 RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 297
RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE+
Sbjct: 1 RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEH 60
>gi|198453089|ref|XP_001359066.2| Ubx, isoform A [Drosophila pseudoobscura pseudoobscura]
gi|218512108|sp|P20822.3|UBX_DROPS RecName: Full=Homeotic protein ultrabithorax
gi|198132207|gb|EAL28209.2| Ubx, isoform A [Drosophila pseudoobscura pseudoobscura]
Length = 385
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 60/77 (77%), Positives = 64/77 (83%), Gaps = 1/77 (1%)
Query: 221 SASLPSPLYP-WMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
S SL L P W+ + R+RGRQTYTRYQTLELEKEFH N YLTRRRRIE+AHALCLTE
Sbjct: 272 SESLAGSLLPDWLGTNGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTE 331
Query: 280 RQIKIWFQNRRMKWKKE 296
RQIKIWFQNRRMK KKE
Sbjct: 332 RQIKIWFQNRRMKLKKE 348
>gi|195146376|ref|XP_002014162.1| GL23004 [Drosophila persimilis]
gi|194103105|gb|EDW25148.1| GL23004 [Drosophila persimilis]
Length = 387
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 60/77 (77%), Positives = 64/77 (83%), Gaps = 1/77 (1%)
Query: 221 SASLPSPLYP-WMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
S SL L P W+ + R+RGRQTYTRYQTLELEKEFH N YLTRRRRIE+AHALCLTE
Sbjct: 274 SESLAGSLLPDWLGTNGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTE 333
Query: 280 RQIKIWFQNRRMKWKKE 296
RQIKIWFQNRRMK KKE
Sbjct: 334 RQIKIWFQNRRMKLKKE 350
>gi|410952544|ref|XP_003982939.1| PREDICTED: homeobox protein Hox-A5 [Felis catus]
Length = 133
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 57/64 (89%), Positives = 59/64 (92%)
Query: 237 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
E KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+ERQIKIWFQNRRMKWKK+
Sbjct: 57 EGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 116
Query: 297 NKSK 300
NK K
Sbjct: 117 NKLK 120
>gi|390351591|ref|XP_783280.3| PREDICTED: uncharacterized protein LOC577994 [Strongylocentrotus
purpuratus]
Length = 394
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 53/60 (88%), Positives = 58/60 (96%)
Query: 237 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
+RKRGRQTYTR QTLELEKEFH+NRYLTR+RRIEIA A+CL+ERQIKIWFQNRRMKWKKE
Sbjct: 291 DRKRGRQTYTRAQTLELEKEFHYNRYLTRKRRIEIAQAVCLSERQIKIWFQNRRMKWKKE 350
>gi|355568481|gb|EHH24762.1| hypothetical protein EGK_08477 [Macaca mulatta]
Length = 269
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 105/327 (32%), Positives = 133/327 (40%), Gaps = 73/327 (22%)
Query: 1 MSSYFANSYMPDIKNGGVLPPEHHQQHHYGATVLPQNNGVEDPSMYDPRQVHHYGQVPNN 60
MSSYF NS+ NG P+ +Q +YG G Y H G N
Sbjct: 1 MSSYFVNSFSGRYPNG----PD-YQLLNYG-------RGXSLSCSYRDPAAMHTGSYGYN 48
Query: 61 GQPVHGMPYPRFPPYDRMDIR------NAAYYGAHEGGMEQYPRPDSPSMGHMGPQNGHQ 114
Y+ MD+ +++++GA +P P +
Sbjct: 49 --------------YNGMDLSVNRSSASSSHFGAVGESSRAFPAPAQEPRFRQAASSCSL 94
Query: 115 TPVVYASCKLQAAVGNGIIPGPESPNDLVDPTLNNHHHHQHHHMNHHPHPHPQQQQPQQP 174
+ C +G P SP+D P ++ + + + P Q P
Sbjct: 95 SSPESLPCT--NGDSHGAKPSASSPSDQATPASSSANFTEIDEASASSEPEEAASQLSSP 152
Query: 175 PPQHMMYAQQPPPQHHQVVVNHQQTPPNQPPSQPPNQPPNQQPNNTSASLPSPLYPWMRS 234
+ QP P QTP ++PWMR
Sbjct: 153 S----LARAQPEPMATSTAAPEGQTP--------------------------QIFPWMRK 182
Query: 235 QF--------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+ KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+ERQIKIWF
Sbjct: 183 LHISHDMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWF 242
Query: 287 QNRRMKWKKENKSKDGG-SDAGSDITP 312
QNRRMKWKK+NK K + AGS P
Sbjct: 243 QNRRMKWKKDNKLKSMSLATAGSAFQP 269
>gi|449277035|gb|EMC85342.1| Homeobox protein Hox-B8 [Columba livia]
Length = 241
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 58/74 (78%), Positives = 66/74 (89%), Gaps = 1/74 (1%)
Query: 225 PSPLYPWMRSQFE-RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIK 283
P+ L+PWMR Q R+RGRQTY+RYQTLELEKEF FN YLTR+RRIE++HAL LTERQ+K
Sbjct: 130 PTQLFPWMRPQAAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVK 189
Query: 284 IWFQNRRMKWKKEN 297
IWFQNRRMKWKKEN
Sbjct: 190 IWFQNRRMKWKKEN 203
>gi|3005956|emb|CAA76298.1| homeodomain protein [Lineus sanguineus]
Length = 103
Score = 127 bits (320), Expect = 5e-27, Method: Composition-based stats.
Identities = 61/67 (91%), Positives = 63/67 (94%), Gaps = 1/67 (1%)
Query: 237 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKW-KK 295
+RKRGRQTYTRYQTLELEKEFHFN+YLTRRRRIEIAHALCLTERQIKIWFQNRRMKW KK
Sbjct: 27 DRKRGRQTYTRYQTLELEKEFHFNKYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKK 86
Query: 296 ENKSKDG 302
ENK G
Sbjct: 87 ENKQPVG 93
>gi|195110393|ref|XP_001999766.1| GI24708 [Drosophila mojavensis]
gi|193916360|gb|EDW15227.1| GI24708 [Drosophila mojavensis]
Length = 379
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 60/77 (77%), Positives = 64/77 (83%), Gaps = 1/77 (1%)
Query: 221 SASLPSPLYP-WMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
S SL L P W+ + R+RGRQTYTRYQTLELEKEFH N YLTRRRRIE+AHALCLTE
Sbjct: 266 SESLAGSLLPDWLGTNGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTE 325
Query: 280 RQIKIWFQNRRMKWKKE 296
RQIKIWFQNRRMK KKE
Sbjct: 326 RQIKIWFQNRRMKLKKE 342
>gi|410899432|ref|XP_003963201.1| PREDICTED: homeobox protein Hox-C5a-like [Takifugu rubripes]
Length = 228
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 58/78 (74%), Positives = 64/78 (82%), Gaps = 5/78 (6%)
Query: 228 LYPWMRS-----QFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQI 282
+YPWM + E KR R +YTRYQTLELEKEFHFNRYL+RRRRIEIAH LCL ERQI
Sbjct: 148 IYPWMTKLHMNHESEGKRSRTSYTRYQTLELEKEFHFNRYLSRRRRIEIAHNLCLNERQI 207
Query: 283 KIWFQNRRMKWKKENKSK 300
KIWFQNRRMKWKK++K K
Sbjct: 208 KIWFQNRRMKWKKDSKIK 225
>gi|148228967|ref|NP_001079291.1| homeobox protein Hox-C5 [Xenopus laevis]
gi|115527869|gb|AAI24881.1| Hoxc5-A protein [Xenopus laevis]
Length = 226
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 58/82 (70%), Positives = 64/82 (78%), Gaps = 5/82 (6%)
Query: 228 LYPWMRS-----QFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQI 282
+YPWM + + KR R +YTRYQTLELEKEFHFNRYLTRRRRIEIA+ LCL ERQI
Sbjct: 144 IYPWMTKLHMSHETDGKRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQI 203
Query: 283 KIWFQNRRMKWKKENKSKDGGS 304
KIWFQNRRMKWKK+ K K S
Sbjct: 204 KIWFQNRRMKWKKDTKVKSKDS 225
>gi|57091665|ref|XP_548179.1| PREDICTED: homeobox protein Hox-B8 [Canis lupus familiaris]
Length = 243
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 58/75 (77%), Positives = 66/75 (88%), Gaps = 2/75 (2%)
Query: 225 PSPLYPWMRSQFE--RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQI 282
P+ L+PWMR Q R+RGRQTY+RYQTLELEKEF FN YLTR+RRIE++HAL LTERQ+
Sbjct: 131 PTQLFPWMRPQAAAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQV 190
Query: 283 KIWFQNRRMKWKKEN 297
KIWFQNRRMKWKKEN
Sbjct: 191 KIWFQNRRMKWKKEN 205
>gi|149639536|ref|XP_001516048.1| PREDICTED: homeobox protein Hox-D4-like [Ornithorhynchus anatinus]
Length = 239
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 65/104 (62%), Positives = 73/104 (70%), Gaps = 13/104 (12%)
Query: 206 SQPPNQPPNQQPNNTSASLPSPLYPWMR-----------SQFERKRGRQTYTRYQTLELE 254
SQPP Q PN T+ P+ +YPWM+ + E KR R YTR Q LELE
Sbjct: 107 SQPPGL--KQPPNGTALKQPAVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELE 164
Query: 255 KEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
KEFHFNRYLTRRRRIEIAH LCL+ERQIKIWFQNRRMKWKK++K
Sbjct: 165 KEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 208
>gi|930147|emb|CAA32708.1| Hox 2.3 protein [Mus musculus]
Length = 60
Score = 127 bits (319), Expect = 6e-27, Method: Composition-based stats.
Identities = 58/60 (96%), Positives = 59/60 (98%)
Query: 238 RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 297
RKRGRQTYTRYQTLELEKEFH+NRYLTRRRRIEIAH LCLTERQIKIWFQNRRMKWKKEN
Sbjct: 1 RKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHTLCLTERQIKIWFQNRRMKWKKEN 60
>gi|151935661|gb|ABS18812.1| Hox5, partial [Flaccisagitta enflata]
Length = 335
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 60/81 (74%), Positives = 66/81 (81%), Gaps = 5/81 (6%)
Query: 226 SPLYPWMRSQ-----FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTER 280
+ ++PWMR ++KR RQTYTR+QTLELEKEFHFNRYLTRRRRIEI HAL LTER
Sbjct: 186 ATIFPWMRGTTGDLGIDQKRTRQTYTRHQTLELEKEFHFNRYLTRRRRIEIVHALGLTER 245
Query: 281 QIKIWFQNRRMKWKKENKSKD 301
QIKIWFQNRRMKWKKEN K
Sbjct: 246 QIKIWFQNRRMKWKKENNLKS 266
>gi|18079282|ref|NP_536748.1| ultrabithorax, isoform B [Drosophila melanogaster]
gi|7300190|gb|AAF55356.1| ultrabithorax, isoform B [Drosophila melanogaster]
Length = 346
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 58/73 (79%), Positives = 61/73 (83%), Gaps = 3/73 (4%)
Query: 227 PLYPWMR---SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIK 283
YPWM + R+RGRQTYTRYQTLELEKEFH N YLTRRRRIE+AHALCLTERQIK
Sbjct: 238 TFYPWMAIAGTNGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIK 297
Query: 284 IWFQNRRMKWKKE 296
IWFQNRRMK KKE
Sbjct: 298 IWFQNRRMKLKKE 310
>gi|13273317|ref|NP_076921.1| homeobox protein Hox-B8 [Homo sapiens]
gi|300116176|ref|NP_001177816.1| homeobox protein Hox-B8 [Macaca mulatta]
gi|296202577|ref|XP_002748517.1| PREDICTED: homeobox protein Hox-B8 [Callithrix jacchus]
gi|335297810|ref|XP_003358122.1| PREDICTED: homeobox protein Hox-B8-like [Sus scrofa]
gi|395826622|ref|XP_003786516.1| PREDICTED: homeobox protein Hox-B8 [Otolemur garnettii]
gi|397514560|ref|XP_003827549.1| PREDICTED: homeobox protein Hox-B8 [Pan paniscus]
gi|403279483|ref|XP_003931279.1| PREDICTED: homeobox protein Hox-B8 [Saimiri boliviensis
boliviensis]
gi|426347614|ref|XP_004041444.1| PREDICTED: homeobox protein Hox-B8 [Gorilla gorilla gorilla]
gi|20141506|sp|P17481.2|HXB8_HUMAN RecName: Full=Homeobox protein Hox-B8; AltName: Full=Homeobox
protein Hox-2.4; AltName: Full=Homeobox protein Hox-2D
gi|11993911|gb|AAG42143.1| HOXB8 [Homo sapiens]
gi|119615130|gb|EAW94724.1| homeobox B8, isoform CRA_b [Homo sapiens]
gi|146327438|gb|AAI41561.1| Homeobox B8 [synthetic construct]
gi|208966500|dbj|BAG73264.1| homeobox B8 [synthetic construct]
gi|281344384|gb|EFB19968.1| hypothetical protein PANDA_005015 [Ailuropoda melanoleuca]
gi|410207798|gb|JAA01118.1| homeobox B8 [Pan troglodytes]
Length = 243
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 58/75 (77%), Positives = 66/75 (88%), Gaps = 2/75 (2%)
Query: 225 PSPLYPWMRSQFE--RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQI 282
P+ L+PWMR Q R+RGRQTY+RYQTLELEKEF FN YLTR+RRIE++HAL LTERQ+
Sbjct: 131 PTQLFPWMRPQAAAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQV 190
Query: 283 KIWFQNRRMKWKKEN 297
KIWFQNRRMKWKKEN
Sbjct: 191 KIWFQNRRMKWKKEN 205
>gi|301617263|ref|XP_002938067.1| PREDICTED: homeobox protein Hox-B8-like [Xenopus (Silurana)
tropicalis]
Length = 243
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 58/75 (77%), Positives = 66/75 (88%), Gaps = 2/75 (2%)
Query: 225 PSPLYPWMRSQFE--RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQI 282
P+ L+PWMR Q R+RGRQTY+RYQTLELEKEF FN YLTR+RRIE++HAL LTERQ+
Sbjct: 130 PTQLFPWMRPQAAAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQV 189
Query: 283 KIWFQNRRMKWKKEN 297
KIWFQNRRMKWKKEN
Sbjct: 190 KIWFQNRRMKWKKEN 204
>gi|121308922|dbj|BAF43726.1| transcription factor Hox8 [Metacrinus rotundus]
Length = 263
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 63/97 (64%), Positives = 73/97 (75%), Gaps = 7/97 (7%)
Query: 227 PLYPWMRS------QFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTER 280
P+Y WM+ ++KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIA A+CL+ER
Sbjct: 164 PVYNWMKIPGTSLIGTDKKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAQAVCLSER 223
Query: 281 QIKIWFQNRRMKWKKENKSKDGGSDAGSDITPATSPQ 317
QIKIWFQNRRMK KKE S+D A S + +S +
Sbjct: 224 QIKIWFQNRRMKAKKET-SRDADESADSPASAQSSEE 259
>gi|21755659|dbj|BAC04730.1| unnamed protein product [Homo sapiens]
Length = 243
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 58/75 (77%), Positives = 66/75 (88%), Gaps = 2/75 (2%)
Query: 225 PSPLYPWMRSQFE--RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQI 282
P+ L+PWMR Q R+RGRQTY+RYQTLELEKEF FN YLTR+RRIE++HAL LTERQ+
Sbjct: 131 PTQLFPWMRPQAAAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQV 190
Query: 283 KIWFQNRRMKWKKEN 297
KIWFQNRRMKWKKEN
Sbjct: 191 KIWFQNRRMKWKKEN 205
>gi|297465048|ref|XP_002703634.1| PREDICTED: homeobox protein Hox-D8 [Bos taurus]
gi|297471596|ref|XP_002685357.1| PREDICTED: homeobox protein Hox-D8 [Bos taurus]
gi|296490678|tpg|DAA32791.1| TPA: homeobox D8-like [Bos taurus]
Length = 277
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 58/78 (74%), Positives = 68/78 (87%), Gaps = 2/78 (2%)
Query: 222 ASLPSPLYPWMRSQFE--RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
+S PS ++PWMR Q R+RGRQTY+R+QTLELEKEF FN YLTR+RRIE++HAL LTE
Sbjct: 166 SSSPSQMFPWMRPQAAPGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALALTE 225
Query: 280 RQIKIWFQNRRMKWKKEN 297
RQ+KIWFQNRRMKWKKEN
Sbjct: 226 RQVKIWFQNRRMKWKKEN 243
>gi|340727727|ref|XP_003402189.1| PREDICTED: homeobox protein abdominal-A homolog isoform 1 [Bombus
terrestris]
Length = 395
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 62/88 (70%), Positives = 67/88 (76%), Gaps = 15/88 (17%)
Query: 227 PLYPWMR-----SQFER----------KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEI 271
P YPWM S F+R +RGRQTYTR+QTLELEKEFHFN YLTRRRRIEI
Sbjct: 243 PRYPWMSITDWMSPFDRVVCGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEI 302
Query: 272 AHALCLTERQIKIWFQNRRMKWKKENKS 299
AHALCLTERQIKIWFQNRRMK KKE ++
Sbjct: 303 AHALCLTERQIKIWFQNRRMKLKKELRA 330
>gi|126326351|ref|XP_001368596.1| PREDICTED: homeobox protein Hox-D4-like [Monodelphis domestica]
Length = 238
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 66/121 (54%), Positives = 80/121 (66%), Gaps = 13/121 (10%)
Query: 204 PPSQPPNQPPN--QQPNNTSASLPSPLYPWMR-----------SQFERKRGRQTYTRYQT 250
P S+ +Q N Q PN T+ P+ +YPWM+ + E KR R YTR Q
Sbjct: 100 PSSRACSQLANLKQPPNGTALKQPAVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQV 159
Query: 251 LELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSKDGGSDAGSDI 310
LELEKEFHFNRYLTRRRRIEIAH LCL+ERQIKIWFQNRRMKWKK++K + + S +
Sbjct: 160 LELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHKLPNTKGRSSSAV 219
Query: 311 T 311
+
Sbjct: 220 S 220
>gi|17922001|gb|AAK06846.2| abdominal-A protein [Myrmica rubra]
Length = 394
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 62/88 (70%), Positives = 67/88 (76%), Gaps = 15/88 (17%)
Query: 227 PLYPWMR-----SQFER----------KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEI 271
P YPWM S F+R +RGRQTYTR+QTLELEKEFHFN YLTRRRRIEI
Sbjct: 242 PRYPWMSITDWMSPFDRVVCGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEI 301
Query: 272 AHALCLTERQIKIWFQNRRMKWKKENKS 299
AHALCLTERQIKIWFQNRRMK KKE ++
Sbjct: 302 AHALCLTERQIKIWFQNRRMKLKKELRA 329
>gi|38016603|gb|AAR07635.1| transcription factor Hox4 [Ptychodera flava]
Length = 275
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 66/122 (54%), Positives = 76/122 (62%), Gaps = 17/122 (13%)
Query: 211 QPPNQQPNNTSASLPSPLYPWMR------------SQFERKRGRQTYTRYQTLELEKEFH 258
QP + P T+ + +YPWM+ + E KR R YTRYQ LELEKEFH
Sbjct: 146 QPGSTTPPITATTNQKVMYPWMKRAHIHPGVGAAQNGTEHKRTRTAYTRYQVLELEKEFH 205
Query: 259 FNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE-----NKSKDGGSDAGSDITPA 313
FNRYLTRRRRIEIAHAL LTERQ+KIWFQNRRMKWKK+ K+K GS +P
Sbjct: 206 FNRYLTRRRRIEIAHALGLTERQVKIWFQNRRMKWKKDHNLPNTKTKSQSQTQGSSFSPT 265
Query: 314 TS 315
S
Sbjct: 266 ES 267
>gi|1334651|emb|CAA30124.1| unnamed protein product [Xenopus laevis]
Length = 90
Score = 127 bits (319), Expect = 6e-27, Method: Composition-based stats.
Identities = 66/80 (82%), Positives = 71/80 (88%), Gaps = 1/80 (1%)
Query: 237 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
+RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE
Sbjct: 2 DRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 61
Query: 297 NKSK-DGGSDAGSDITPATS 315
+K + D DAG + T T+
Sbjct: 62 HKEESDQTPDAGEESTAPTT 81
>gi|62958679|gb|AAY23658.1| Hox protein [Oreochromis niloticus]
Length = 101
Score = 127 bits (319), Expect = 6e-27, Method: Composition-based stats.
Identities = 60/81 (74%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Query: 237 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
+R+RGRQ Y+RYQTLELEKEFHFNRYLTRRRRIEIA+ALCLTERQIKIWFQNRRMKWKKE
Sbjct: 6 DRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 65
Query: 297 NKSKDGGSDAGSDITPATSPQ 317
S + G++ T A+ Q
Sbjct: 66 --SNLTSTVTGTEQTGASQEQ 84
>gi|194900573|ref|XP_001979830.1| GG16810 [Drosophila erecta]
gi|190651533|gb|EDV48788.1| GG16810 [Drosophila erecta]
Length = 592
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 61/86 (70%), Positives = 65/86 (75%), Gaps = 14/86 (16%)
Query: 228 LYPWMRSQFER--------------KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAH 273
L WM S FER +RGRQTYTR+QTLELEKEFHFN YLTRRRRIEIAH
Sbjct: 374 LTDWMGSPFERVVCGDFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAH 433
Query: 274 ALCLTERQIKIWFQNRRMKWKKENKS 299
ALCLTERQIKIWFQNRRMK KKE ++
Sbjct: 434 ALCLTERQIKIWFQNRRMKLKKELRA 459
>gi|21362265|ref|NP_034591.1| homeobox protein Hox-B8 [Mus musculus]
gi|300793662|ref|NP_001178578.1| homeobox protein Hox-B8 [Rattus norvegicus]
gi|123259|sp|P09632.2|HXB8_MOUSE RecName: Full=Homeobox protein Hox-B8; AltName: Full=Homeobox
protein Hox-2.4
gi|51392|emb|CAA32000.1| unnamed protein product [Mus musculus]
gi|51397|emb|CAA38014.1| homeobox-2.4 intracisternal A-particle protein [Mus musculus]
gi|295919|emb|CAA32141.1| Hox-2.4 protein [Mus musculus]
gi|148684076|gb|EDL16023.1| homeobox B8 [Mus musculus]
gi|149053980|gb|EDM05797.1| homeo box B8 (mapped) [Rattus norvegicus]
gi|223460336|gb|AAI39213.1| Hoxb8 protein [Mus musculus]
gi|223461094|gb|AAI39210.1| Homeo box B8 [Mus musculus]
Length = 243
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 58/75 (77%), Positives = 66/75 (88%), Gaps = 2/75 (2%)
Query: 225 PSPLYPWMRSQFE--RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQI 282
P+ L+PWMR Q R+RGRQTY+RYQTLELEKEF FN YLTR+RRIE++HAL LTERQ+
Sbjct: 131 PTQLFPWMRPQAAAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQV 190
Query: 283 KIWFQNRRMKWKKEN 297
KIWFQNRRMKWKKEN
Sbjct: 191 KIWFQNRRMKWKKEN 205
>gi|195500182|ref|XP_002097264.1| GE26127 [Drosophila yakuba]
gi|194183365|gb|EDW96976.1| GE26127 [Drosophila yakuba]
Length = 590
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 61/86 (70%), Positives = 65/86 (75%), Gaps = 14/86 (16%)
Query: 228 LYPWMRSQFER--------------KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAH 273
L WM S FER +RGRQTYTR+QTLELEKEFHFN YLTRRRRIEIAH
Sbjct: 374 LTDWMGSPFERVVCGDFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAH 433
Query: 274 ALCLTERQIKIWFQNRRMKWKKENKS 299
ALCLTERQIKIWFQNRRMK KKE ++
Sbjct: 434 ALCLTERQIKIWFQNRRMKLKKELRA 459
>gi|59939333|gb|AAX12425.1| Dbuz\abd-A-PB [Drosophila buzzatii]
Length = 536
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 61/86 (70%), Positives = 65/86 (75%), Gaps = 14/86 (16%)
Query: 228 LYPWMRSQFER--------------KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAH 273
L WM S FER +RGRQTYTR+QTLELEKEFHFN YLTRRRRIEIAH
Sbjct: 317 LTDWMGSPFERVVCGDFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAH 376
Query: 274 ALCLTERQIKIWFQNRRMKWKKENKS 299
ALCLTERQIKIWFQNRRMK KKE ++
Sbjct: 377 ALCLTERQIKIWFQNRRMKLKKELRA 402
>gi|969088|gb|AAA84410.1| UBXIVA [Drosophila melanogaster]
Length = 346
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 58/73 (79%), Positives = 61/73 (83%), Gaps = 3/73 (4%)
Query: 227 PLYPWMR---SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIK 283
YPWM + R+RGRQTYTRYQTLELEKEFH N YLTRRRRIE+AHALCLTERQIK
Sbjct: 238 TFYPWMAIAGTNGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIK 297
Query: 284 IWFQNRRMKWKKE 296
IWFQNRRMK KKE
Sbjct: 298 IWFQNRRMKLKKE 310
>gi|351709857|gb|EHB12776.1| Homeobox protein Hox-D8, partial [Heterocephalus glaber]
Length = 154
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 61/81 (75%), Positives = 70/81 (86%), Gaps = 3/81 (3%)
Query: 219 NTSASLPSPLYPWMRSQFE--RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALC 276
N SAS PS ++PWMR Q R+RGRQTY+R+QTLELEKEF FN YLTR+RRIE++HAL
Sbjct: 41 NQSAS-PSQMFPWMRPQAAPGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALA 99
Query: 277 LTERQIKIWFQNRRMKWKKEN 297
LTERQ+KIWFQNRRMKWKKEN
Sbjct: 100 LTERQVKIWFQNRRMKWKKEN 120
>gi|220898196|gb|ACL81451.1| HoxB8 [Latimeria menadoensis]
Length = 240
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 77/187 (41%), Positives = 99/187 (52%), Gaps = 12/187 (6%)
Query: 119 YASCKLQAAVGN--GIIPGPESPNDLVDPT-LNNHHHHQHHHMNHHPHP-HPQQQQPQQP 174
Y C +G ++ GP + PT + +HH ++ P+ +P
Sbjct: 23 YYDCGFAQDLGGRPTVVYGPSTGGTFQHPTQIQEFYHHGTSSLSTSPYQQNPCAVTCHGD 82
Query: 175 PPQHMMYAQQPPPQHHQVVVNHQQTPPNQ--PPSQPPNQPPNQQPNNTSASLPSPLYPWM 232
P Y P Q + Q + Q N + N+ P+ L+PWM
Sbjct: 83 PGNFYGY----DPLQRQTLFTAQDSDLVQFTDCKLASNGVGEEAENSEQTPSPTQLFPWM 138
Query: 233 RSQFE--RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRR 290
R Q R+RGRQTY+RYQTLELEKEF FN YLTR+RRIE++HAL LTERQ+KIWFQNRR
Sbjct: 139 RPQVAAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRR 198
Query: 291 MKWKKEN 297
MKWKKEN
Sbjct: 199 MKWKKEN 205
>gi|158702265|gb|ABW77464.1| homeobox protein HoxB8aa [Salmo salar]
Length = 245
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 58/74 (78%), Positives = 66/74 (89%), Gaps = 1/74 (1%)
Query: 225 PSPLYPWMRSQFE-RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIK 283
P+ L+PWMR Q R+RGRQTY+RYQTLELEKEF FN YLTR+RRIE++HAL LTERQ+K
Sbjct: 131 PTQLFPWMRPQSAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVK 190
Query: 284 IWFQNRRMKWKKEN 297
IWFQNRRMKWKKEN
Sbjct: 191 IWFQNRRMKWKKEN 204
>gi|133740636|emb|CAL91856.1| sex comb reduced-1 [Cupiennius salei]
Length = 110
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 62/81 (76%), Positives = 66/81 (81%), Gaps = 10/81 (12%)
Query: 228 LYPWMR----------SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 277
+YPWMR S E KR R +YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL
Sbjct: 3 IYPWMRKVHVGQNGVNSMGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 62
Query: 278 TERQIKIWFQNRRMKWKKENK 298
+ERQIKIWFQNRRMKWKKE+K
Sbjct: 63 SERQIKIWFQNRRMKWKKEHK 83
>gi|1334621|emb|CAA30294.1| unnamed protein product [Danio rerio]
Length = 76
Score = 127 bits (319), Expect = 7e-27, Method: Composition-based stats.
Identities = 60/75 (80%), Positives = 63/75 (84%), Gaps = 1/75 (1%)
Query: 239 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+ERQIKIWFQNRRMKWKK+NK
Sbjct: 2 KRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNK 61
Query: 299 SKDGG-SDAGSDITP 312
K + AGS P
Sbjct: 62 LKSMSLATAGSAFQP 76
>gi|397327516|gb|AFO42777.1| HOXD8 [Polyodon spathula]
Length = 236
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 65/113 (57%), Positives = 82/113 (72%), Gaps = 3/113 (2%)
Query: 188 QHHQVVVNHQQTPPNQ-PPSQPPNQPPNQQPNNTSA-SLPSPLYPWMRSQF-ERKRGRQT 244
Q Q+ Q+T Q P + + ++P + + S PS ++PWMR Q R+RGRQT
Sbjct: 91 QRQQLFTTQQETELVQYPDCKSSSSNTGEEPEHLNQNSSPSQMFPWMRPQAPGRRRGRQT 150
Query: 245 YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 297
YTR+QTLELEKEF FN YLTR+RRIE++HAL L+ERQ+KIWFQNRRMKWKKEN
Sbjct: 151 YTRFQTLELEKEFLFNPYLTRKRRIEVSHALGLSERQVKIWFQNRRMKWKKEN 203
>gi|70569917|dbj|BAE06502.1| transcription factor protein [Ciona intestinalis]
Length = 220
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 58/77 (75%), Positives = 62/77 (80%), Gaps = 6/77 (7%)
Query: 228 LYPWMRSQFE------RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQ 281
+YPWM+ KR R YTRYQTLELEKEFH+NRYLTRRRRIE+AH LCLTERQ
Sbjct: 126 IYPWMKRIHGGETPDPSKRTRTAYTRYQTLELEKEFHYNRYLTRRRRIEVAHTLCLTERQ 185
Query: 282 IKIWFQNRRMKWKKENK 298
IKIWFQNRRMKWKKENK
Sbjct: 186 IKIWFQNRRMKWKKENK 202
>gi|61966487|emb|CAI45575.1| homeodomain protein Antp [Pecten maximus]
Length = 60
Score = 127 bits (319), Expect = 7e-27, Method: Composition-based stats.
Identities = 54/59 (91%), Positives = 58/59 (98%)
Query: 238 RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
RKRGR+TYTRYQTLELEKEFHFN+YLTRRRR+EIAH LCLTERQIKIWFQ+RRMKWKKE
Sbjct: 1 RKRGRRTYTRYQTLELEKEFHFNKYLTRRRRVEIAHVLCLTERQIKIWFQSRRMKWKKE 59
>gi|358332706|dbj|GAA30037.2| homeobox protein SMOX-1 [Clonorchis sinensis]
Length = 733
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 57/74 (77%), Positives = 63/74 (85%), Gaps = 5/74 (6%)
Query: 228 LYPWMRSQ-----FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQI 282
+YPWM + ++KR RQTYTRYQTLELEKEFHFN+YLTRRRRIEIAH L LTERQI
Sbjct: 472 VYPWMNPKGTDVGADQKRTRQTYTRYQTLELEKEFHFNKYLTRRRRIEIAHTLTLTERQI 531
Query: 283 KIWFQNRRMKWKKE 296
KIWFQNRRMKWKK+
Sbjct: 532 KIWFQNRRMKWKKD 545
>gi|195107232|ref|XP_001998219.1| GI23753 [Drosophila mojavensis]
gi|193914813|gb|EDW13680.1| GI23753 [Drosophila mojavensis]
Length = 529
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 61/86 (70%), Positives = 65/86 (75%), Gaps = 14/86 (16%)
Query: 228 LYPWMRSQFER--------------KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAH 273
L WM S FER +RGRQTYTR+QTLELEKEFHFN YLTRRRRIEIAH
Sbjct: 310 LTDWMGSPFERVVCGDFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAH 369
Query: 274 ALCLTERQIKIWFQNRRMKWKKENKS 299
ALCLTERQIKIWFQNRRMK KKE ++
Sbjct: 370 ALCLTERQIKIWFQNRRMKLKKELRA 395
>gi|390178471|ref|XP_003736654.1| Ubx, isoform C [Drosophila pseudoobscura pseudoobscura]
gi|388859456|gb|EIM52727.1| Ubx, isoform C [Drosophila pseudoobscura pseudoobscura]
Length = 368
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 60/77 (77%), Positives = 64/77 (83%), Gaps = 1/77 (1%)
Query: 221 SASLPSPLYP-WMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
S SL L P W+ + R+RGRQTYTRYQTLELEKEFH N YLTRRRRIE+AHALCLTE
Sbjct: 255 SESLAGSLLPDWLGTNGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTE 314
Query: 280 RQIKIWFQNRRMKWKKE 296
RQIKIWFQNRRMK KKE
Sbjct: 315 RQIKIWFQNRRMKLKKE 331
>gi|311272689|ref|XP_003133544.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-D8-like [Sus
scrofa]
Length = 292
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 58/78 (74%), Positives = 68/78 (87%), Gaps = 2/78 (2%)
Query: 222 ASLPSPLYPWMRSQFE--RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
+S PS ++PWMR Q R+RGRQTY+R+QTLELEKEF FN YLTR+RRIE++HAL LTE
Sbjct: 181 SSSPSQMFPWMRPQAAPGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALALTE 240
Query: 280 RQIKIWFQNRRMKWKKEN 297
RQ+KIWFQNRRMKWKKEN
Sbjct: 241 RQVKIWFQNRRMKWKKEN 258
>gi|74096097|ref|NP_001027665.1| Hox 5 [Ciona intestinalis]
gi|2564231|emb|CAA05151.1| Hox 5 [Ciona intestinalis]
Length = 220
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 58/77 (75%), Positives = 62/77 (80%), Gaps = 6/77 (7%)
Query: 228 LYPWMRSQFE------RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQ 281
+YPWM+ KR R YTRYQTLELEKEFH+NRYLTRRRRIE+AH LCLTERQ
Sbjct: 126 IYPWMKRIHGGETPDPSKRTRTAYTRYQTLELEKEFHYNRYLTRRRRIEVAHTLCLTERQ 185
Query: 282 IKIWFQNRRMKWKKENK 298
IKIWFQNRRMKWKKENK
Sbjct: 186 IKIWFQNRRMKWKKENK 202
>gi|190337699|gb|AAI63205.1| Hoxc5a protein [Danio rerio]
Length = 233
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 58/81 (71%), Positives = 65/81 (80%), Gaps = 5/81 (6%)
Query: 228 LYPWMRS-----QFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQI 282
+YPWM + + KR R +YTRYQTLELEKEFHFNRYLTRRRRIEIA+ LCL ERQI
Sbjct: 151 IYPWMTKLHMSHESDGKRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQI 210
Query: 283 KIWFQNRRMKWKKENKSKDGG 303
KIWFQNRRMKWKK++K K G
Sbjct: 211 KIWFQNRRMKWKKDSKLKVKG 231
>gi|449491432|ref|XP_002187352.2| PREDICTED: homeobox protein Hox-B8 [Taeniopygia guttata]
Length = 241
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 58/74 (78%), Positives = 66/74 (89%), Gaps = 1/74 (1%)
Query: 225 PSPLYPWMRSQFE-RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIK 283
P+ L+PWMR Q R+RGRQTY+RYQTLELEKEF FN YLTR+RRIE++HAL LTERQ+K
Sbjct: 130 PTQLFPWMRPQAAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVK 189
Query: 284 IWFQNRRMKWKKEN 297
IWFQNRRMKWKKEN
Sbjct: 190 IWFQNRRMKWKKEN 203
>gi|387598536|gb|AFJ91924.1| homeodomain transcription factor 4 [Platynereis dumerilii]
Length = 273
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 67/110 (60%), Positives = 76/110 (69%), Gaps = 18/110 (16%)
Query: 216 QPNNTSASLPSPLYPWMRS------------QFERKRGRQTYTRYQTLELEKEFHFNRYL 263
QPN+T + P +YPWM+ + KR R YTR+Q LELEKEFHFNRYL
Sbjct: 132 QPNSTPTN-PPVIYPWMKRIHVGSQGANGAYGADNKRTRTAYTRHQVLELEKEFHFNRYL 190
Query: 264 TRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN-----KSKDGGSDAGS 308
TRRRRIEIAHALCLT+RQIKIWFQNRRMKWKKEN K++ GS A S
Sbjct: 191 TRRRRIEIAHALCLTKRQIKIWFQNRRMKWKKENKLPNTKNRLSGSSANS 240
>gi|195038659|ref|XP_001990774.1| GH18074 [Drosophila grimshawi]
gi|193894970|gb|EDV93836.1| GH18074 [Drosophila grimshawi]
Length = 529
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 61/86 (70%), Positives = 65/86 (75%), Gaps = 14/86 (16%)
Query: 228 LYPWMRSQFER--------------KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAH 273
L WM S FER +RGRQTYTR+QTLELEKEFHFN YLTRRRRIEIAH
Sbjct: 310 LTDWMGSPFERVVCGDFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAH 369
Query: 274 ALCLTERQIKIWFQNRRMKWKKENKS 299
ALCLTERQIKIWFQNRRMK KKE ++
Sbjct: 370 ALCLTERQIKIWFQNRRMKLKKELRA 395
>gi|390351573|ref|XP_003727685.1| PREDICTED: homeobox protein Hox-A6-like [Strongylocentrotus
purpuratus]
Length = 280
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 67/136 (49%), Positives = 75/136 (55%), Gaps = 27/136 (19%)
Query: 193 VVNHQQTPPNQPPSQPPNQPPNQQP----------------NNTSASLPSPLYPWMRSQF 236
++ ++TP N PP + N P + +YPWMR
Sbjct: 120 AISRRKTPTNTPPVTLSDCASNASPPTNINNNNNNHPGSIKGSGKGQTNEQIYPWMRRIH 179
Query: 237 E-----------RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIW 285
KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHAL LTERQIKIW
Sbjct: 180 STTAAAQNGTEPSKRSRTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALGLTERQIKIW 239
Query: 286 FQNRRMKWKKENKSKD 301
FQNRRMKWKKE+ K
Sbjct: 240 FQNRRMKWKKEHNVKS 255
>gi|291391792|ref|XP_002712253.1| PREDICTED: homeobox D8-like [Oryctolagus cuniculus]
Length = 491
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 58/77 (75%), Positives = 68/77 (88%), Gaps = 1/77 (1%)
Query: 222 ASLPSPLYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTER 280
+S PS ++PWMR Q R+RGRQTY+R+QTLELEKEF FN YLTR+RRIE++HAL LTER
Sbjct: 381 SSSPSQMFPWMRPQAPGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALALTER 440
Query: 281 QIKIWFQNRRMKWKKEN 297
Q+KIWFQNRRMKWKKEN
Sbjct: 441 QVKIWFQNRRMKWKKEN 457
>gi|159162043|pdb|1AHD|P Chain P, Determination Of The Nmr Solution Structure Of An
Antennapedia Homeodomain-Dna Complex
gi|159164638|pdb|2HOA|A Chain A, Structure Determination Of The Antp(C39->s) Homeodomain
From Nuclear Magnetic Resonance Data In Solution Using A
Novel Strategy For The Structure Calculation With The
Programs Diana, Caliba, Habas And Glomsa
Length = 68
Score = 127 bits (318), Expect = 8e-27, Method: Composition-based stats.
Identities = 61/63 (96%), Positives = 62/63 (98%)
Query: 238 RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 297
RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHAL LTERQIKIWFQNRRMKWKKEN
Sbjct: 2 RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALSLTERQIKIWFQNRRMKWKKEN 61
Query: 298 KSK 300
K+K
Sbjct: 62 KTK 64
>gi|24647534|ref|NP_732176.1| abdominal A, isoform B [Drosophila melanogaster]
gi|1708230|sp|P29555.2|ABDA_DROME RecName: Full=Homeobox protein abdominal-A
gi|969083|gb|AAA84405.1| ABD-AII [Drosophila melanogaster]
gi|23171502|gb|AAF55360.2| abdominal A, isoform B [Drosophila melanogaster]
Length = 590
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 61/86 (70%), Positives = 65/86 (75%), Gaps = 14/86 (16%)
Query: 228 LYPWMRSQFER--------------KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAH 273
L WM S FER +RGRQTYTR+QTLELEKEFHFN YLTRRRRIEIAH
Sbjct: 374 LTDWMGSPFERVVCGDFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAH 433
Query: 274 ALCLTERQIKIWFQNRRMKWKKENKS 299
ALCLTERQIKIWFQNRRMK KKE ++
Sbjct: 434 ALCLTERQIKIWFQNRRMKLKKELRA 459
>gi|195349268|ref|XP_002041167.1| GM15405 [Drosophila sechellia]
gi|194122772|gb|EDW44815.1| GM15405 [Drosophila sechellia]
Length = 588
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 61/86 (70%), Positives = 65/86 (75%), Gaps = 14/86 (16%)
Query: 228 LYPWMRSQFER--------------KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAH 273
L WM S FER +RGRQTYTR+QTLELEKEFHFN YLTRRRRIEIAH
Sbjct: 372 LTDWMGSPFERVVCGDFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAH 431
Query: 274 ALCLTERQIKIWFQNRRMKWKKENKS 299
ALCLTERQIKIWFQNRRMK KKE ++
Sbjct: 432 ALCLTERQIKIWFQNRRMKLKKELRA 457
>gi|426222465|ref|XP_004005412.1| PREDICTED: homeobox protein Hox-D8 [Ovis aries]
Length = 331
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 58/77 (75%), Positives = 68/77 (88%), Gaps = 1/77 (1%)
Query: 222 ASLPSPLYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTER 280
+S PS ++PWMR Q R+RGRQTY+R+QTLELEKEF FN YLTR+RRIE++HAL LTER
Sbjct: 221 SSSPSQMFPWMRPQAPGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALALTER 280
Query: 281 QIKIWFQNRRMKWKKEN 297
Q+KIWFQNRRMKWKKEN
Sbjct: 281 QVKIWFQNRRMKWKKEN 297
>gi|15029506|ref|NP_062458.1| homeobox protein Hox-D8 isoform 1 [Homo sapiens]
gi|13124737|sp|P13378.2|HXD8_HUMAN RecName: Full=Homeobox protein Hox-D8; AltName: Full=Homeobox
protein Hox-4E; AltName: Full=Homeobox protein Hox-5.4
gi|11993931|gb|AAG42152.1| HOXD8 [Homo sapiens]
gi|208968523|dbj|BAG74100.1| homeobox D8 [synthetic construct]
Length = 290
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 58/78 (74%), Positives = 68/78 (87%), Gaps = 2/78 (2%)
Query: 222 ASLPSPLYPWMRSQFE--RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
+S PS ++PWMR Q R+RGRQTY+R+QTLELEKEF FN YLTR+RRIE++HAL LTE
Sbjct: 179 SSSPSQMFPWMRPQAAPGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALALTE 238
Query: 280 RQIKIWFQNRRMKWKKEN 297
RQ+KIWFQNRRMKWKKEN
Sbjct: 239 RQVKIWFQNRRMKWKKEN 256
>gi|195394383|ref|XP_002055823.1| abd-A [Drosophila virilis]
gi|194142532|gb|EDW58935.1| abd-A [Drosophila virilis]
Length = 522
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 61/86 (70%), Positives = 65/86 (75%), Gaps = 14/86 (16%)
Query: 228 LYPWMRSQFER--------------KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAH 273
L WM S FER +RGRQTYTR+QTLELEKEFHFN YLTRRRRIEIAH
Sbjct: 300 LTDWMGSPFERVVCGDFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAH 359
Query: 274 ALCLTERQIKIWFQNRRMKWKKENKS 299
ALCLTERQIKIWFQNRRMK KKE ++
Sbjct: 360 ALCLTERQIKIWFQNRRMKLKKELRA 385
>gi|443689507|gb|ELT91881.1| hypothetical protein CAPTEDRAFT_168122 [Capitella teleta]
Length = 298
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 64/109 (58%), Positives = 75/109 (68%), Gaps = 22/109 (20%)
Query: 198 QTPPNQPPSQPPNQPPNQQPNNTSASLPSPLYPWMR--------SQFERKRGRQTYTRYQ 249
Q+P ++ + PNQP +YPWM+ S + KR R +YTR+Q
Sbjct: 171 QSPTDEGAAGSPNQPH--------------IYPWMKRMHIGHDTSNADNKRTRTSYTRHQ 216
Query: 250 TLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
TLELEKEFHFNRYLTRRRRIEIAH+L LTERQIKIWFQNRRMKWKKE+K
Sbjct: 217 TLELEKEFHFNRYLTRRRRIEIAHSLNLTERQIKIWFQNRRMKWKKEHK 265
>gi|109944916|dbj|BAE96984.1| Ultrabithorax [Daphnia magna]
gi|109944919|dbj|BAE96986.1| Ultrabithorax [Daphnia magna]
gi|109944927|dbj|BAE96990.1| Ultrabithorax [Daphnia magna]
gi|109944930|dbj|BAE96992.1| Ultrabithorax [Daphnia magna]
Length = 369
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 58/73 (79%), Positives = 61/73 (83%), Gaps = 3/73 (4%)
Query: 227 PLYPWMR---SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIK 283
YPWM + R+RGRQTYTRYQTLELEKEFH N YLTRRRRIE+AHALCLTERQIK
Sbjct: 262 TFYPWMAIAGANGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIK 321
Query: 284 IWFQNRRMKWKKE 296
IWFQNRRMK KKE
Sbjct: 322 IWFQNRRMKLKKE 334
>gi|1085188|pir||S20087 homeotic protein box6 - sea urchin (Parechinus angulosus)
(fragment)
Length = 138
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 57/73 (78%), Positives = 64/73 (87%), Gaps = 1/73 (1%)
Query: 237 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
+RKRGRQTYTR QTLELEKEFH+NRYLTR+RRIEIA A+CL+ERQIKIWFQNRRMKWKKE
Sbjct: 57 DRKRGRQTYTRAQTLELEKEFHYNRYLTRKRRIEIAQAVCLSERQIKIWFQNRRMKWKKE 116
Query: 297 NKSKDGGSDAGSD 309
+ +DG D D
Sbjct: 117 -RVRDGNGDEEDD 128
>gi|345327993|ref|XP_001515131.2| PREDICTED: homeobox protein Hox-D8-like, partial [Ornithorhynchus
anatinus]
Length = 267
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 58/78 (74%), Positives = 68/78 (87%), Gaps = 2/78 (2%)
Query: 222 ASLPSPLYPWMRSQFE--RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
+S PS ++PWMR Q R+RGRQTY+R+QTLELEKEF FN YLTR+RRIE++HAL LTE
Sbjct: 156 SSSPSQMFPWMRPQAAPGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALGLTE 215
Query: 280 RQIKIWFQNRRMKWKKEN 297
RQ+KIWFQNRRMKWKKEN
Sbjct: 216 RQVKIWFQNRRMKWKKEN 233
>gi|387231099|gb|AFJ72260.1| homeobox A6, partial [Hipposideros armiger]
gi|387231101|gb|AFJ72261.1| homeobox A6, partial [Taphozous melanopogon]
gi|387231107|gb|AFJ72264.1| homeobox A6, partial [Myotis laniger]
gi|387231111|gb|AFJ72266.1| homeobox A6, partial [Hipposideros pomona]
Length = 85
Score = 127 bits (318), Expect = 9e-27, Method: Composition-based stats.
Identities = 59/71 (83%), Positives = 64/71 (90%)
Query: 239 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
+RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIA+ALCLTERQIKIWFQNRRMKWKKENK
Sbjct: 8 RRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKENK 67
Query: 299 SKDGGSDAGSD 309
+ +G +
Sbjct: 68 LINSTQPSGEE 78
>gi|431894934|gb|ELK04727.1| Homeobox protein Hox-D8 [Pteropus alecto]
Length = 451
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 58/78 (74%), Positives = 68/78 (87%), Gaps = 2/78 (2%)
Query: 222 ASLPSPLYPWMRSQFE--RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
+S PS ++PWMR Q R+RGRQTY+R+QTLELEKEF FN YLTR+RRIE++HAL LTE
Sbjct: 340 SSSPSQMFPWMRPQAAPGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALALTE 399
Query: 280 RQIKIWFQNRRMKWKKEN 297
RQ+KIWFQNRRMKWKKEN
Sbjct: 400 RQVKIWFQNRRMKWKKEN 417
>gi|395532651|ref|XP_003768383.1| PREDICTED: homeobox protein Hox-B8 [Sarcophilus harrisii]
gi|359754101|gb|AEV59523.1| HOXB8 [Macropus eugenii]
Length = 243
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 58/75 (77%), Positives = 66/75 (88%), Gaps = 2/75 (2%)
Query: 225 PSPLYPWMRSQFE--RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQI 282
P+ L+PWMR Q R+RGRQTY+RYQTLELEKEF FN YLTR+RRIE++HAL LTERQ+
Sbjct: 131 PTQLFPWMRPQAAAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQV 190
Query: 283 KIWFQNRRMKWKKEN 297
KIWFQNRRMKWKKEN
Sbjct: 191 KIWFQNRRMKWKKEN 205
>gi|125490339|ref|NP_001074950.1| homeobox protein Hox-D8 [Pan troglodytes]
gi|146324939|sp|A2T748.1|HXD8_PANTR RecName: Full=Homeobox protein Hox-D8
gi|124111225|gb|ABM92003.1| HOXD8 [Pan troglodytes]
gi|410352013|gb|JAA42610.1| homeobox D8 [Pan troglodytes]
Length = 290
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 58/78 (74%), Positives = 68/78 (87%), Gaps = 2/78 (2%)
Query: 222 ASLPSPLYPWMRSQFE--RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
+S PS ++PWMR Q R+RGRQTY+R+QTLELEKEF FN YLTR+RRIE++HAL LTE
Sbjct: 179 SSSPSQMFPWMRPQAAPGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALALTE 238
Query: 280 RQIKIWFQNRRMKWKKEN 297
RQ+KIWFQNRRMKWKKEN
Sbjct: 239 RQVKIWFQNRRMKWKKEN 256
>gi|109944940|dbj|BAE96998.1| Ultrabithorax [Artemia franciscana]
gi|109944943|dbj|BAE97000.1| Ultrabithorax [Artemia franciscana]
Length = 280
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 61/92 (66%), Positives = 71/92 (77%), Gaps = 3/92 (3%)
Query: 225 PSPLYPWMR---SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQ 281
P+ YPWM + R+RGRQTYTRYQTLELEKEFH N YLTRRRRIE+AH+LCLTERQ
Sbjct: 167 PAAFYPWMAIAGANGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHSLCLTERQ 226
Query: 282 IKIWFQNRRMKWKKENKSKDGGSDAGSDITPA 313
IKIWFQNRRMK KKE ++ ++ ITP+
Sbjct: 227 IKIWFQNRRMKLKKEIQAIKELNEQDKRITPS 258
>gi|395837227|ref|XP_003791542.1| PREDICTED: homeobox protein Hox-D8 [Otolemur garnettii]
Length = 289
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 58/77 (75%), Positives = 68/77 (88%), Gaps = 1/77 (1%)
Query: 222 ASLPSPLYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTER 280
+S PS ++PWMR Q R+RGRQTY+R+QTLELEKEF FN YLTR+RRIE++HAL LTER
Sbjct: 179 SSSPSQMFPWMRPQAPGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALALTER 238
Query: 281 QIKIWFQNRRMKWKKEN 297
Q+KIWFQNRRMKWKKEN
Sbjct: 239 QVKIWFQNRRMKWKKEN 255
>gi|63259070|gb|AAD46174.2|AF151671_1 Lox5 homeobox protein [Alitta virens]
Length = 132
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 58/62 (93%), Positives = 60/62 (96%)
Query: 236 FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKK 295
FE+KR RQTYTRYQTLELEKEFH+NRYLTRRRRIEIAHAL LTERQIKIWFQNRRMKWKK
Sbjct: 3 FEQKRTRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALGLTERQIKIWFQNRRMKWKK 62
Query: 296 EN 297
EN
Sbjct: 63 EN 64
>gi|345797029|ref|XP_003434266.1| PREDICTED: homeobox protein Hox-D8, partial [Canis lupus
familiaris]
Length = 199
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 58/78 (74%), Positives = 68/78 (87%), Gaps = 2/78 (2%)
Query: 222 ASLPSPLYPWMRSQFE--RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
+S PS ++PWMR Q R+RGRQTY+R+QTLELEKEF FN YLTR+RRIE++HAL LTE
Sbjct: 88 SSSPSQMFPWMRPQAAPGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALALTE 147
Query: 280 RQIKIWFQNRRMKWKKEN 297
RQ+KIWFQNRRMKWKKEN
Sbjct: 148 RQVKIWFQNRRMKWKKEN 165
>gi|119370793|sp|Q1KKU7.1|HXC5A_FUGRU RecName: Full=Homeobox protein Hox-C5a
gi|94482831|gb|ABF22447.1| homeobox protein HoxC5a [Takifugu rubripes]
Length = 205
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 58/78 (74%), Positives = 64/78 (82%), Gaps = 5/78 (6%)
Query: 228 LYPWMRS-----QFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQI 282
+YPWM + E KR R +YTRYQTLELEKEFHFNRYL+RRRRIEIAH LCL ERQI
Sbjct: 125 IYPWMTKLHMNHESEGKRSRTSYTRYQTLELEKEFHFNRYLSRRRRIEIAHNLCLNERQI 184
Query: 283 KIWFQNRRMKWKKENKSK 300
KIWFQNRRMKWKK++K K
Sbjct: 185 KIWFQNRRMKWKKDSKIK 202
>gi|60552556|gb|AAH90853.1| HOXD8 protein [Homo sapiens]
Length = 289
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 58/77 (75%), Positives = 68/77 (88%), Gaps = 1/77 (1%)
Query: 222 ASLPSPLYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTER 280
+S PS ++PWMR Q R+RGRQTY+R+QTLELEKEF FN YLTR+RRIE++HAL LTER
Sbjct: 179 SSSPSQMFPWMRPQAPGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALALTER 238
Query: 281 QIKIWFQNRRMKWKKEN 297
Q+KIWFQNRRMKWKKEN
Sbjct: 239 QVKIWFQNRRMKWKKEN 255
>gi|391337014|ref|XP_003742869.1| PREDICTED: uncharacterized protein LOC100904659 [Metaseiulus
occidentalis]
Length = 330
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 62/91 (68%), Positives = 67/91 (73%), Gaps = 13/91 (14%)
Query: 225 PSPLYPWMRS-------------QFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEI 271
P YPWM+ KR RQTYTRYQTLELEKEFHFNRYLTRRRRIEI
Sbjct: 200 PISYYPWMKGYAPNTADGQGGCPTSAPKRTRQTYTRYQTLELEKEFHFNRYLTRRRRIEI 259
Query: 272 AHALCLTERQIKIWFQNRRMKWKKENKSKDG 302
AHALCL+ERQIKIWFQNRRMK KKE+K ++G
Sbjct: 260 AHALCLSERQIKIWFQNRRMKAKKESKLQNG 290
>gi|359323087|ref|XP_849475.2| PREDICTED: uncharacterized protein LOC607625 [Canis lupus familiaris]
Length = 1280
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 57/79 (72%), Positives = 64/79 (81%), Gaps = 5/79 (6%)
Query: 228 LYPWMRS-----QFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQI 282
+YPWM + + KR R +YTRYQTLELEKEFHFNRYLTRRRRIEIA+ LCL ERQI
Sbjct: 1198 IYPWMTKLHMSHETDGKRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQI 1257
Query: 283 KIWFQNRRMKWKKENKSKD 301
KIWFQNRRMKWKK++K K
Sbjct: 1258 KIWFQNRRMKWKKDSKMKS 1276
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 57/76 (75%), Positives = 65/76 (85%), Gaps = 1/76 (1%)
Query: 223 SLPSPLYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQ 281
S PS ++PWMR R+ GRQTY+RYQTLELEKEF FN YLTR+RRIE++HAL LTERQ
Sbjct: 523 SSPSLMFPWMRPHAPGRRSGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQ 582
Query: 282 IKIWFQNRRMKWKKEN 297
+KIWFQNRRMKWKKEN
Sbjct: 583 VKIWFQNRRMKWKKEN 598
>gi|3445436|emb|CAA07502.1| homeobox protein [Cupiennius salei]
Length = 245
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/77 (77%), Positives = 65/77 (84%), Gaps = 4/77 (5%)
Query: 227 PLYPWMR----SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQI 282
P YPWM + R+RGRQTYTR+QTLELEKEFHFN YLTRRRRIEIAHALCLTERQI
Sbjct: 121 PRYPWMSIAGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQI 180
Query: 283 KIWFQNRRMKWKKENKS 299
KIWFQNRRMK KKE ++
Sbjct: 181 KIWFQNRRMKLKKEMRA 197
>gi|315075340|ref|NP_001186675.1| homeobox protein Hox-D8 isoform 2 [Homo sapiens]
gi|24270881|gb|AAH38709.1| Homeobox D8 [Homo sapiens]
Length = 289
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/77 (75%), Positives = 68/77 (88%), Gaps = 1/77 (1%)
Query: 222 ASLPSPLYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTER 280
+S PS ++PWMR Q R+RGRQTY+R+QTLELEKEF FN YLTR+RRIE++HAL LTER
Sbjct: 179 SSSPSQMFPWMRPQAPGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALALTER 238
Query: 281 QIKIWFQNRRMKWKKEN 297
Q+KIWFQNRRMKWKKEN
Sbjct: 239 QVKIWFQNRRMKWKKEN 255
>gi|255755643|dbj|BAH96547.1| homeodomain transcription factor [Balanoglossus simodensis]
Length = 278
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 74/119 (62%), Gaps = 17/119 (14%)
Query: 211 QPPNQQPNNTSASLPSPLYPWMRSQ------------FERKRGRQTYTRYQTLELEKEFH 258
QP + P T+ + +YPWM+ E KR R YTRYQ LELEKEFH
Sbjct: 148 QPGSTTPPITATTNQKVMYPWMKRAHIHPGVGAAQNGAEHKRTRTAYTRYQVLELEKEFH 207
Query: 259 FNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE-----NKSKDGGSDAGSDITP 312
FNRYLTRRRRIEIAHAL LTERQ+KIWFQNRRMKWKK+ K+K GS +P
Sbjct: 208 FNRYLTRRRRIEIAHALGLTERQVKIWFQNRRMKWKKDHNLPNTKTKSQSQTQGSSFSP 266
>gi|18307794|gb|AAL67686.1|AF435787_1 ultrabithorax [Artemia franciscana]
Length = 279
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/92 (66%), Positives = 71/92 (77%), Gaps = 3/92 (3%)
Query: 225 PSPLYPWMR---SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQ 281
P+ YPWM + R+RGRQTYTRYQTLELEKEFH N YLTRRRRIE+AH+LCLTERQ
Sbjct: 166 PAAFYPWMAIAGANGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHSLCLTERQ 225
Query: 282 IKIWFQNRRMKWKKENKSKDGGSDAGSDITPA 313
IKIWFQNRRMK KKE ++ ++ ITP+
Sbjct: 226 IKIWFQNRRMKLKKEIQAIKELNEQDKRITPS 257
>gi|195451407|ref|XP_002072904.1| GK13853 [Drosophila willistoni]
gi|194168989|gb|EDW83890.1| GK13853 [Drosophila willistoni]
Length = 582
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/86 (70%), Positives = 65/86 (75%), Gaps = 14/86 (16%)
Query: 228 LYPWMRSQFER--------------KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAH 273
L WM S FER +RGRQTYTR+QTLELEKEFHFN YLTRRRRIEIAH
Sbjct: 361 LTDWMGSPFERVVCGDFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAH 420
Query: 274 ALCLTERQIKIWFQNRRMKWKKENKS 299
ALCLTERQIKIWFQNRRMK KKE ++
Sbjct: 421 ALCLTERQIKIWFQNRRMKLKKELRA 446
>gi|410207674|gb|JAA01056.1| homeobox D8 [Pan troglodytes]
Length = 289
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/77 (75%), Positives = 68/77 (88%), Gaps = 1/77 (1%)
Query: 222 ASLPSPLYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTER 280
+S PS ++PWMR Q R+RGRQTY+R+QTLELEKEF FN YLTR+RRIE++HAL LTER
Sbjct: 179 SSSPSQMFPWMRPQAPGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALALTER 238
Query: 281 QIKIWFQNRRMKWKKEN 297
Q+KIWFQNRRMKWKKEN
Sbjct: 239 QVKIWFQNRRMKWKKEN 255
>gi|345489354|ref|XP_001603621.2| PREDICTED: homeotic protein ultrabithorax-like [Nasonia
vitripennis]
Length = 345
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/72 (80%), Positives = 61/72 (84%), Gaps = 3/72 (4%)
Query: 228 LYPWMR---SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKI 284
YPWM + R+RGRQTYTRYQTLELEKEFH N YLTRRRRIE+AHALCLTERQIKI
Sbjct: 235 FYPWMAIAGANGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKI 294
Query: 285 WFQNRRMKWKKE 296
WFQNRRMK KKE
Sbjct: 295 WFQNRRMKLKKE 306
>gi|198453096|ref|XP_002137595.1| GA26453 [Drosophila pseudoobscura pseudoobscura]
gi|198132210|gb|EDY68153.1| GA26453 [Drosophila pseudoobscura pseudoobscura]
Length = 560
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/86 (70%), Positives = 65/86 (75%), Gaps = 14/86 (16%)
Query: 228 LYPWMRSQFER--------------KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAH 273
L WM S FER +RGRQTYTR+QTLELEKEFHFN YLTRRRRIEIAH
Sbjct: 348 LTDWMGSPFERVVCGDFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAH 407
Query: 274 ALCLTERQIKIWFQNRRMKWKKENKS 299
ALCLTERQIKIWFQNRRMK KKE ++
Sbjct: 408 ALCLTERQIKIWFQNRRMKLKKELRA 433
>gi|359754119|gb|AEV59539.1| HOXD8 [Macropus eugenii]
Length = 308
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/78 (74%), Positives = 68/78 (87%), Gaps = 2/78 (2%)
Query: 222 ASLPSPLYPWMRSQFE--RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
+S PS ++PWMR Q R+RGRQTY+R+QTLELEKEF FN YLTR+RRIE++HAL LTE
Sbjct: 197 SSSPSQMFPWMRPQAAPGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALGLTE 256
Query: 280 RQIKIWFQNRRMKWKKEN 297
RQ+KIWFQNRRMKWKKEN
Sbjct: 257 RQVKIWFQNRRMKWKKEN 274
>gi|322366542|gb|ADW95345.1| Hox7 [Paracentrotus lividus]
Length = 321
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/79 (74%), Positives = 65/79 (82%), Gaps = 7/79 (8%)
Query: 229 YPWM-------RSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQ 281
YPWM + RKR RQTYTRYQTLELEKEFHFNRYLTRRRRIE++H L LTERQ
Sbjct: 186 YPWMPVAGPNVGLEVGRKRCRQTYTRYQTLELEKEFHFNRYLTRRRRIELSHLLGLTERQ 245
Query: 282 IKIWFQNRRMKWKKENKSK 300
IKIWFQNRRMK+KKE+K+K
Sbjct: 246 IKIWFQNRRMKYKKESKNK 264
>gi|58803017|gb|AAW82628.1| HoxC6 [Gasterosteus aculeatus]
Length = 102
Score = 126 bits (317), Expect = 1e-26, Method: Composition-based stats.
Identities = 55/61 (90%), Positives = 60/61 (98%)
Query: 237 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
+R+RGRQ Y+RYQTLELEKEFHFNRYLTRRRRIEIA+ALCLTERQIKIWFQNRRMKWKKE
Sbjct: 7 DRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 66
Query: 297 N 297
+
Sbjct: 67 S 67
>gi|321475840|gb|EFX86802.1| putative homeotic Ultrabithorax protein [Daphnia pulex]
Length = 380
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/72 (80%), Positives = 61/72 (84%), Gaps = 3/72 (4%)
Query: 228 LYPWMR---SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKI 284
YPWM + R+RGRQTYTRYQTLELEKEFH N YLTRRRRIE+AHALCLTERQIKI
Sbjct: 273 FYPWMAIAGANGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKI 332
Query: 285 WFQNRRMKWKKE 296
WFQNRRMK KKE
Sbjct: 333 WFQNRRMKLKKE 344
>gi|297668900|ref|XP_002812673.1| PREDICTED: homeobox protein Hox-D8 [Pongo abelii]
Length = 235
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/78 (74%), Positives = 68/78 (87%), Gaps = 2/78 (2%)
Query: 222 ASLPSPLYPWMRSQFE--RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
+S PS ++PWMR Q R+RGRQTY+R+QTLELEKEF FN YLTR+RRIE++HAL LTE
Sbjct: 124 SSSPSQMFPWMRPQAAPGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALALTE 183
Query: 280 RQIKIWFQNRRMKWKKEN 297
RQ+KIWFQNRRMKWKKEN
Sbjct: 184 RQVKIWFQNRRMKWKKEN 201
>gi|296204456|ref|XP_002749335.1| PREDICTED: homeobox protein Hox-D8 [Callithrix jacchus]
Length = 288
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/78 (74%), Positives = 68/78 (87%), Gaps = 2/78 (2%)
Query: 222 ASLPSPLYPWMRSQFE--RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
+S PS ++PWMR Q R+RGRQTY+R+QTLELEKEF FN YLTR+RRIE++HAL LTE
Sbjct: 177 SSSPSQMFPWMRPQAAPGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALALTE 236
Query: 280 RQIKIWFQNRRMKWKKEN 297
RQ+KIWFQNRRMKWKKEN
Sbjct: 237 RQVKIWFQNRRMKWKKEN 254
>gi|344268347|ref|XP_003406022.1| PREDICTED: homeobox protein Hox-D8-like [Loxodonta africana]
Length = 427
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/78 (74%), Positives = 68/78 (87%), Gaps = 2/78 (2%)
Query: 222 ASLPSPLYPWMRSQFE--RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
+S PS ++PWMR Q R+RGRQTY+R+QTLELEKEF FN YLTR+RRIE++HAL LTE
Sbjct: 316 SSSPSQMFPWMRPQATPGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALALTE 375
Query: 280 RQIKIWFQNRRMKWKKEN 297
RQ+KIWFQNRRMKWKKEN
Sbjct: 376 RQVKIWFQNRRMKWKKEN 393
>gi|195146386|ref|XP_002014167.1| GL23002 [Drosophila persimilis]
gi|194103110|gb|EDW25153.1| GL23002 [Drosophila persimilis]
Length = 562
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/86 (70%), Positives = 65/86 (75%), Gaps = 14/86 (16%)
Query: 228 LYPWMRSQFER--------------KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAH 273
L WM S FER +RGRQTYTR+QTLELEKEFHFN YLTRRRRIEIAH
Sbjct: 350 LTDWMGSPFERVVCGDFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAH 409
Query: 274 ALCLTERQIKIWFQNRRMKWKKENKS 299
ALCLTERQIKIWFQNRRMK KKE ++
Sbjct: 410 ALCLTERQIKIWFQNRRMKLKKELRA 435
>gi|121308835|dbj|BAF43724.1| transcription factor Hox5 [Metacrinus rotundus]
Length = 180
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/83 (74%), Positives = 64/83 (77%), Gaps = 9/83 (10%)
Query: 228 LYPWMR--------SQFE-RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWMR S E KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHAL LT
Sbjct: 78 IYPWMRRVHSSTGLSSIEPAKRSRTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALGLT 137
Query: 279 ERQIKIWFQNRRMKWKKENKSKD 301
ERQIKIWFQNRRMKWKKE+ K
Sbjct: 138 ERQIKIWFQNRRMKWKKEHNVKS 160
>gi|123315|sp|P15860.1|HM90_APIME RecName: Full=Homeobox protein H90
gi|155676|gb|AAA27728.1| H90 protein, partial [Apis mellifera]
Length = 74
Score = 126 bits (317), Expect = 1e-26, Method: Composition-based stats.
Identities = 61/66 (92%), Positives = 62/66 (93%)
Query: 237 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
ERKRGRQTYTRYQTLELEKEFH+NRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE
Sbjct: 7 ERKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 66
Query: 297 NKSKDG 302
N G
Sbjct: 67 NARATG 72
>gi|47551093|ref|NP_999725.1| homeobox protein HB1 [Strongylocentrotus purpuratus]
gi|2506527|sp|P13545.2|HMB1_STRPU RecName: Full=Homeobox protein HB1; AltName: Full=SPHBOX1
gi|1339973|dbj|BAA12813.1| homeobox [Strongylocentrotus purpuratus]
Length = 308
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/79 (74%), Positives = 65/79 (82%), Gaps = 7/79 (8%)
Query: 229 YPWM-------RSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQ 281
YPWM + RKR RQTYTRYQTLELEKEFHFNRYLTRRRRIE++H L LTERQ
Sbjct: 174 YPWMPVSGPNVGLEVGRKRCRQTYTRYQTLELEKEFHFNRYLTRRRRIELSHLLGLTERQ 233
Query: 282 IKIWFQNRRMKWKKENKSK 300
IKIWFQNRRMK+KKE+K+K
Sbjct: 234 IKIWFQNRRMKYKKESKNK 252
>gi|123298|sp|P17278.1|HXD4_CHICK RecName: Full=Homeobox protein Hox-D4; AltName: Full=Homeobox
protein Hox-A; Short=Chox-A
Length = 235
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/99 (61%), Positives = 71/99 (71%), Gaps = 11/99 (11%)
Query: 211 QPPNQQPNNTSASLPSPLYPWMR-----------SQFERKRGRQTYTRYQTLELEKEFHF 259
QP + P+ ++ P+ +YPWM+ S E KR R YTR Q LELEKEFHF
Sbjct: 106 QPALKAPHGSAVKQPAVVYPWMKKVHVNSVNPNYSGGEPKRSRTAYTRQQVLELEKEFHF 165
Query: 260 NRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
NRYLTRRRRIEIAH LCL+ERQIKIWFQNRRMKWKK++K
Sbjct: 166 NRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 204
>gi|402888732|ref|XP_003907705.1| PREDICTED: homeobox protein Hox-D8 [Papio anubis]
Length = 251
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/78 (74%), Positives = 68/78 (87%), Gaps = 2/78 (2%)
Query: 222 ASLPSPLYPWMRSQFE--RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
+S PS ++PWMR Q R+RGRQTY+R+QTLELEKEF FN YLTR+RRIE++HAL LTE
Sbjct: 140 SSSPSQMFPWMRPQAAPGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALALTE 199
Query: 280 RQIKIWFQNRRMKWKKEN 297
RQ+KIWFQNRRMKWKKEN
Sbjct: 200 RQVKIWFQNRRMKWKKEN 217
>gi|281349084|gb|EFB24668.1| hypothetical protein PANDA_019127 [Ailuropoda melanoleuca]
Length = 185
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/78 (74%), Positives = 68/78 (87%), Gaps = 2/78 (2%)
Query: 222 ASLPSPLYPWMRSQFE--RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
+S PS ++PWMR Q R+RGRQTY+R+QTLELEKEF FN YLTR+RRIE++HAL LTE
Sbjct: 74 SSSPSQMFPWMRPQAAPGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALALTE 133
Query: 280 RQIKIWFQNRRMKWKKEN 297
RQ+KIWFQNRRMKWKKEN
Sbjct: 134 RQVKIWFQNRRMKWKKEN 151
>gi|325260881|gb|ADZ04670.1| homeobox D8 [Notophthalmus viridescens]
Length = 246
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/77 (75%), Positives = 67/77 (87%), Gaps = 2/77 (2%)
Query: 223 SLPSPLYPWMRSQFE--RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTER 280
S PS ++PWMR Q R+RGRQTY+R+QTLELEKEF FN YLTR+RRIE++HAL LTER
Sbjct: 136 SSPSQMFPWMRPQAAPGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALGLTER 195
Query: 281 QIKIWFQNRRMKWKKEN 297
Q+KIWFQNRRMKWKKEN
Sbjct: 196 QVKIWFQNRRMKWKKEN 212
>gi|20339635|gb|AAM19471.1|AF410913_1 HoxK6 homeobox [Petromyzon marinus]
Length = 60
Score = 126 bits (317), Expect = 1e-26, Method: Composition-based stats.
Identities = 56/59 (94%), Positives = 59/59 (100%)
Query: 239 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 297
KRGRQTY+RYQTLELEKEFHFNRYLTRRRR+EIAH+LCLTERQIKIWFQNRRMKWKKEN
Sbjct: 2 KRGRQTYSRYQTLELEKEFHFNRYLTRRRRVEIAHSLCLTERQIKIWFQNRRMKWKKEN 60
>gi|126326347|ref|XP_001368563.1| PREDICTED: homeobox protein Hox-D8-like [Monodelphis domestica]
Length = 307
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/78 (74%), Positives = 68/78 (87%), Gaps = 2/78 (2%)
Query: 222 ASLPSPLYPWMRSQFE--RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
+S PS ++PWMR Q R+RGRQTY+R+QTLELEKEF FN YLTR+RRIE++HAL LTE
Sbjct: 196 SSSPSQMFPWMRPQAAPGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALGLTE 255
Query: 280 RQIKIWFQNRRMKWKKEN 297
RQ+KIWFQNRRMKWKKEN
Sbjct: 256 RQVKIWFQNRRMKWKKEN 273
>gi|18858849|ref|NP_571219.1| homeobox protein Hox-C5a [Danio rerio]
gi|1708356|sp|P09074.2|HXC5A_DANRE RecName: Full=Homeobox protein Hox-C5a; Short=Hox-C5; AltName:
Full=Homeobox protein Hox-3.4; AltName: Full=Homeobox
protein Zf-25
gi|414105|emb|CAA48399.1| homeobox-3.4 protein [Danio rerio]
Length = 232
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/81 (71%), Positives = 65/81 (80%), Gaps = 5/81 (6%)
Query: 228 LYPWMRS-----QFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQI 282
+YPWM + + KR R +YTRYQTLELEKEFHFNRYLTRRRRIEIA+ LCL ERQI
Sbjct: 150 IYPWMTKLHMSHESDGKRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQI 209
Query: 283 KIWFQNRRMKWKKENKSKDGG 303
KIWFQNRRMKWKK++K K G
Sbjct: 210 KIWFQNRRMKWKKDSKLKVKG 230
>gi|58382033|ref|XP_311624.2| AGAP004661-PB [Anopheles gambiae str. PEST]
gi|3420832|gb|AAC31943.1| Ultrabithorax homeotic protein IVa [Anopheles gambiae]
gi|55242654|gb|EAA07259.2| AGAP004661-PB [Anopheles gambiae str. PEST]
Length = 310
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/73 (79%), Positives = 61/73 (83%), Gaps = 3/73 (4%)
Query: 227 PLYPWMR---SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIK 283
YPWM + R+RGRQTYTRYQTLELEKEFH N YLTRRRRIE+AHALCLTERQIK
Sbjct: 205 TFYPWMAIAGANGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIK 264
Query: 284 IWFQNRRMKWKKE 296
IWFQNRRMK KKE
Sbjct: 265 IWFQNRRMKLKKE 277
>gi|332692513|gb|AEE90190.1| Homeobox C5a [Anguilla anguilla]
gi|385654506|gb|AFI62003.1| Hox-C5a [Anguilla japonica]
Length = 250
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/101 (64%), Positives = 73/101 (72%), Gaps = 6/101 (5%)
Query: 205 PSQPPNQPPNQQPNNTSASLPSPLYPWMRSQF-----ERKRGRQTYTRYQTLELEKEFHF 259
P QP QP N T+ P +YPWM + KR R +YTRYQTLELEKEFHF
Sbjct: 134 PVQPVRQPNNSAQPQTNHQQPQ-IYPWMTKLHMSHEPDGKRSRTSYTRYQTLELEKEFHF 192
Query: 260 NRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSK 300
NRYLTRRRRIEIA++LCL ERQIKIWFQNRRMKWKK++K K
Sbjct: 193 NRYLTRRRRIEIANSLCLNERQIKIWFQNRRMKWKKDSKLK 233
>gi|194742540|ref|XP_001953759.1| GF17922 [Drosophila ananassae]
gi|190626796|gb|EDV42320.1| GF17922 [Drosophila ananassae]
Length = 596
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/86 (70%), Positives = 65/86 (75%), Gaps = 14/86 (16%)
Query: 228 LYPWMRSQFER--------------KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAH 273
L WM S FER +RGRQTYTR+QTLELEKEFHFN YLTRRRRIEIAH
Sbjct: 376 LTDWMGSPFERVVCGDFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAH 435
Query: 274 ALCLTERQIKIWFQNRRMKWKKENKS 299
ALCLTERQIKIWFQNRRMK KKE ++
Sbjct: 436 ALCLTERQIKIWFQNRRMKLKKELRA 461
>gi|340727729|ref|XP_003402190.1| PREDICTED: homeobox protein abdominal-A homolog isoform 2 [Bombus
terrestris]
Length = 399
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/92 (66%), Positives = 67/92 (72%), Gaps = 19/92 (20%)
Query: 227 PLYPWMR-------------SQFE------RKRGRQTYTRYQTLELEKEFHFNRYLTRRR 267
P YPWM +F+ R+RGRQTYTR+QTLELEKEFHFN YLTRRR
Sbjct: 243 PRYPWMSITDWMSPFDRVVCGEFDGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRR 302
Query: 268 RIEIAHALCLTERQIKIWFQNRRMKWKKENKS 299
RIEIAHALCLTERQIKIWFQNRRMK KKE ++
Sbjct: 303 RIEIAHALCLTERQIKIWFQNRRMKLKKELRA 334
>gi|440910521|gb|ELR60315.1| Homeobox protein Hox-B8, partial [Bos grunniens mutus]
Length = 217
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/75 (77%), Positives = 66/75 (88%), Gaps = 2/75 (2%)
Query: 225 PSPLYPWMRSQFE--RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQI 282
P+ L+PWMR Q R+RGRQTY+RYQTLELEKEF FN YLTR+RRIE++HAL LTERQ+
Sbjct: 122 PTQLFPWMRPQAAAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQV 181
Query: 283 KIWFQNRRMKWKKEN 297
KIWFQNRRMKWKKEN
Sbjct: 182 KIWFQNRRMKWKKEN 196
>gi|390464421|ref|XP_002806951.2| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC100411183 [Callithrix jacchus]
Length = 954
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/97 (62%), Positives = 69/97 (71%), Gaps = 11/97 (11%)
Query: 213 PNQQPNNTSASLPSPLYPWMR-----------SQFERKRGRQTYTRYQTLELEKEFHFNR 261
P Q P T+ P+ +YPWM+ + E KR R YTR Q LELEKEFHFNR
Sbjct: 119 PKQPPPGTALKQPAVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNR 178
Query: 262 YLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
YLTRRRRIEIAH LCL+ERQIKIWFQNRRMKWKK++K
Sbjct: 179 YLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 215
>gi|165873663|gb|ABY67956.1| sex combs reduced hox protein [Capitella teleta]
Length = 197
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/109 (58%), Positives = 75/109 (68%), Gaps = 22/109 (20%)
Query: 198 QTPPNQPPSQPPNQPPNQQPNNTSASLPSPLYPWMR--------SQFERKRGRQTYTRYQ 249
Q+P ++ + PNQP +YPWM+ S + KR R +YTR+Q
Sbjct: 70 QSPTDEGAAGSPNQPH--------------IYPWMKRMHIGHDTSNADNKRTRTSYTRHQ 115
Query: 250 TLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
TLELEKEFHFNRYLTRRRRIEIAH+L LTERQIKIWFQNRRMKWKKE+K
Sbjct: 116 TLELEKEFHFNRYLTRRRRIEIAHSLNLTERQIKIWFQNRRMKWKKEHK 164
>gi|4760774|dbj|BAA77406.1| PLOX6-Dj [Dugesia japonica]
Length = 218
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/75 (78%), Positives = 63/75 (84%), Gaps = 6/75 (8%)
Query: 228 LYPWM------RSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQ 281
+YPWM S + KR RQTYTRYQTLELEKEFHFN+YLTRRRRIEIAHAL LTERQ
Sbjct: 99 VYPWMNPKMNSESSSDHKRSRQTYTRYQTLELEKEFHFNKYLTRRRRIEIAHALSLTERQ 158
Query: 282 IKIWFQNRRMKWKKE 296
IKIWFQNRRMKWKK+
Sbjct: 159 IKIWFQNRRMKWKKD 173
>gi|321475843|gb|EFX86805.1| putative homeotic Fushi-tarazu protein [Daphnia pulex]
Length = 428
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 57/74 (77%), Positives = 63/74 (85%), Gaps = 4/74 (5%)
Query: 231 WMRSQFER----KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
WM++ + KR RQTYTRYQTLELEKEFHFNRYLTRRRR+EIAHALCLTERQIKIWF
Sbjct: 272 WMQAYADVVPNPKRTRQTYTRYQTLELEKEFHFNRYLTRRRRVEIAHALCLTERQIKIWF 331
Query: 287 QNRRMKWKKENKSK 300
QNRRMK KKE ++
Sbjct: 332 QNRRMKAKKETTTQ 345
>gi|440892331|gb|ELR45564.1| Homeobox protein Hox-D8, partial [Bos grunniens mutus]
Length = 197
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/78 (74%), Positives = 68/78 (87%), Gaps = 2/78 (2%)
Query: 222 ASLPSPLYPWMRSQFE--RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
+S PS ++PWMR Q R+RGRQTY+R+QTLELEKEF FN YLTR+RRIE++HAL LTE
Sbjct: 86 SSSPSQMFPWMRPQAAPGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALALTE 145
Query: 280 RQIKIWFQNRRMKWKKEN 297
RQ+KIWFQNRRMKWKKEN
Sbjct: 146 RQVKIWFQNRRMKWKKEN 163
>gi|157816117|gb|ABV82077.1| homeobox protein HoxB8ba [Salmo salar]
Length = 237
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 57/79 (72%), Positives = 68/79 (86%), Gaps = 2/79 (2%)
Query: 221 SASLPSPLYPWMRSQFE-RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
+SLP L+PWM+ Q R+RGRQ Y+R+QTLELEKEF FN YLTR+R++E++HAL LTE
Sbjct: 126 CSSLP-DLFPWMKPQATGRRRGRQAYSRFQTLELEKEFLFNSYLTRKRKVEVSHALALTE 184
Query: 280 RQIKIWFQNRRMKWKKENK 298
RQIKIWFQNRRMKWKKENK
Sbjct: 185 RQIKIWFQNRRMKWKKENK 203
>gi|1086953|gb|AAB35067.1| homeobox protein [Hirudo medicinalis]
Length = 228
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/74 (78%), Positives = 63/74 (85%), Gaps = 4/74 (5%)
Query: 227 PLYPWMR----SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQI 282
P YPWM + +R+RGRQTY+RYQTLELEKEF FNRYLTR+RRIEIAH LCLTERQI
Sbjct: 94 PFYPWMSVVGPNSSQRRRGRQTYSRYQTLELEKEFQFNRYLTRKRRIEIAHCLCLTERQI 153
Query: 283 KIWFQNRRMKWKKE 296
KIWFQNRRMK KKE
Sbjct: 154 KIWFQNRRMKVKKE 167
>gi|426238968|ref|XP_004013408.1| PREDICTED: homeobox protein Hox-B8 [Ovis aries]
Length = 142
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/75 (77%), Positives = 66/75 (88%), Gaps = 2/75 (2%)
Query: 225 PSPLYPWMRSQFE--RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQI 282
P+ L+PWMR Q R+RGRQTY+RYQTLELEKEF FN YLTR+RRIE++HAL LTERQ+
Sbjct: 30 PTQLFPWMRPQAAAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQV 89
Query: 283 KIWFQNRRMKWKKEN 297
KIWFQNRRMKWKKEN
Sbjct: 90 KIWFQNRRMKWKKEN 104
>gi|46395474|ref|NP_997060.1| homeobox protein Hox-D8 [Gallus gallus]
gi|123283|sp|P23459.1|HXD8_CHICK RecName: Full=Homeobox protein Hox-D8; AltName: Full=Homeobox
protein Hox-M; Short=Chox-M
gi|62701|emb|CAA40445.1| CHOX M product [Gallus gallus]
Length = 188
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/115 (54%), Positives = 84/115 (73%), Gaps = 4/115 (3%)
Query: 187 PQHHQVVVNHQQTPPNQ-PPSQPPNQPPNQQPNNTS-ASLPSPLYPWMRSQFE--RKRGR 242
P+ Q+ Q+ Q P + + ++P++ + +S P+ ++PWMR Q R+RGR
Sbjct: 40 PERQQIFTTQQEAELVQYPDCKSSSANIGEEPDHLNQSSSPAQMFPWMRPQAAPGRRRGR 99
Query: 243 QTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 297
QTY+R+QTLELEKEF FN YLTR+RRIE++HAL LTERQ+KIWFQNRRMKWKKEN
Sbjct: 100 QTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKEN 154
>gi|328710877|ref|XP_001944629.2| PREDICTED: homeobox protein abdominal-A homolog [Acyrthosiphon
pisum]
Length = 369
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/88 (70%), Positives = 67/88 (76%), Gaps = 15/88 (17%)
Query: 227 PLYPWMR-----SQFER----------KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEI 271
P YPWM S F+R +RGRQTYTR+QTLELEKEFHFN YLTRRRRIEI
Sbjct: 201 PRYPWMSITDWMSPFDRVVCGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEI 260
Query: 272 AHALCLTERQIKIWFQNRRMKWKKENKS 299
AHALCLTERQIKIWFQNRRMK KKE ++
Sbjct: 261 AHALCLTERQIKIWFQNRRMKLKKELRA 288
>gi|7331260|gb|AAF60347.1|AF242304_1 Hox5 [Herdmania curvata]
Length = 277
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 57/66 (86%), Positives = 59/66 (89%)
Query: 239 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+ERQIKIWFQNRRMKWKK+NK
Sbjct: 199 KRTRTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNK 258
Query: 299 SKDGGS 304
K S
Sbjct: 259 IKSLNS 264
>gi|301787255|ref|XP_002929044.1| PREDICTED: hypothetical protein LOC100473740 [Ailuropoda
melanoleuca]
Length = 441
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/77 (75%), Positives = 68/77 (88%), Gaps = 1/77 (1%)
Query: 222 ASLPSPLYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTER 280
+S PS ++PWMR Q R+RGRQTY+R+QTLELEKEF FN YLTR+RRIE++HAL LTER
Sbjct: 331 SSSPSQMFPWMRPQAPGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALALTER 390
Query: 281 QIKIWFQNRRMKWKKEN 297
Q+KIWFQNRRMKWKKEN
Sbjct: 391 QVKIWFQNRRMKWKKEN 407
>gi|387231105|gb|AFJ72263.1| homeobox A6, partial [Chaerephon plicatus]
Length = 85
Score = 126 bits (316), Expect = 1e-26, Method: Composition-based stats.
Identities = 59/71 (83%), Positives = 64/71 (90%)
Query: 239 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
+RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIA+ALCLTERQIKIWFQNRRMKWKKENK
Sbjct: 8 RRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKENK 67
Query: 299 SKDGGSDAGSD 309
+ +G +
Sbjct: 68 LINSTQPSGEE 78
>gi|520618|emb|CAA84519.1| Hox-7 homeodomain protein [Branchiostoma floridae]
gi|745779|prf||2016458F Hox-7 gene
Length = 81
Score = 126 bits (316), Expect = 1e-26, Method: Composition-based stats.
Identities = 61/62 (98%), Positives = 62/62 (100%)
Query: 237 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
ERKRGRQTYTRYQTLELEKEFHFN+YLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE
Sbjct: 2 ERKRGRQTYTRYQTLELEKEFHFNKYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 61
Query: 297 NK 298
NK
Sbjct: 62 NK 63
>gi|112807184|ref|NP_032302.2| homeobox protein Hox-D8 [Mus musculus]
gi|408360342|sp|P23463.4|HXD8_MOUSE RecName: Full=Homeobox protein Hox-D8; AltName: Full=Homeobox
protein Hox-4.3; AltName: Full=Homeobox protein Hox-5.4
gi|162319132|gb|AAI56342.1| Homeo box D8 [synthetic construct]
gi|225000984|gb|AAI72665.1| Homeo box D8 [synthetic construct]
Length = 289
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 57/78 (73%), Positives = 67/78 (85%), Gaps = 2/78 (2%)
Query: 222 ASLPSPLYPWMRSQFE--RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
+S PS ++PWMR Q R+RGRQTY+R+QTLELEKEF FN YLTR+RRIE++H L LTE
Sbjct: 177 SSSPSQMFPWMRPQAAPGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHTLALTE 236
Query: 280 RQIKIWFQNRRMKWKKEN 297
RQ+KIWFQNRRMKWKKEN
Sbjct: 237 RQVKIWFQNRRMKWKKEN 254
>gi|355564996|gb|EHH21485.1| hypothetical protein EGK_04565, partial [Macaca mulatta]
Length = 183
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/78 (74%), Positives = 68/78 (87%), Gaps = 2/78 (2%)
Query: 222 ASLPSPLYPWMRSQFE--RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
+S PS ++PWMR Q R+RGRQTY+R+QTLELEKEF FN YLTR+RRIE++HAL LTE
Sbjct: 72 SSSPSQMFPWMRPQAAPGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALALTE 131
Query: 280 RQIKIWFQNRRMKWKKEN 297
RQ+KIWFQNRRMKWKKEN
Sbjct: 132 RQVKIWFQNRRMKWKKEN 149
>gi|344249136|gb|EGW05240.1| Homeobox protein Hox-B8 [Cricetulus griseus]
Length = 156
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/75 (77%), Positives = 66/75 (88%), Gaps = 2/75 (2%)
Query: 225 PSPLYPWMRSQFE--RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQI 282
P+ L+PWMR Q R+RGRQTY+RYQTLELEKEF FN YLTR+RRIE++HAL LTERQ+
Sbjct: 43 PTQLFPWMRPQAAAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQV 102
Query: 283 KIWFQNRRMKWKKEN 297
KIWFQNRRMKWKKEN
Sbjct: 103 KIWFQNRRMKWKKEN 117
>gi|345489557|ref|XP_003426162.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein abdominal-A
homolog [Nasonia vitripennis]
Length = 413
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/101 (65%), Positives = 72/101 (71%), Gaps = 16/101 (15%)
Query: 215 QQPNNTSASLPS-PLYPWMR-----SQFER----------KRGRQTYTRYQTLELEKEFH 258
QQP +P P YPWM S F+R +RGRQTYTR+QTLELEKEFH
Sbjct: 240 QQPTAGQPGIPEIPRYPWMSITDWMSPFDRVVCGPNGCPRRRGRQTYTRFQTLELEKEFH 299
Query: 259 FNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKS 299
FN YLTRRRRIEIAHALCLTERQIKIWFQNRRMK KKE ++
Sbjct: 300 FNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKELRA 340
>gi|213513876|ref|NP_001133056.1| homeobox protein HoxB8ba2 [Salmo salar]
gi|157816133|gb|ABV82084.1| homeobox protein HoxB8ba2 [Salmo salar]
gi|158702289|gb|ABW77486.1| homeobox protein HoxB8ba [Salmo salar]
Length = 238
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 57/80 (71%), Positives = 68/80 (85%), Gaps = 3/80 (3%)
Query: 221 SASLPSPLYPWMRSQFE--RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+SLP L+PWM+ Q R+RGRQ Y+R+QTLELEKEF FN YLTR+R++E++HAL LT
Sbjct: 126 CSSLP-DLFPWMKPQAATGRRRGRQAYSRFQTLELEKEFLFNSYLTRKRKVEVSHALALT 184
Query: 279 ERQIKIWFQNRRMKWKKENK 298
ERQIKIWFQNRRMKWKKENK
Sbjct: 185 ERQIKIWFQNRRMKWKKENK 204
>gi|195570283|ref|XP_002103138.1| GD20268 [Drosophila simulans]
gi|194199065|gb|EDX12641.1| GD20268 [Drosophila simulans]
Length = 631
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/86 (70%), Positives = 65/86 (75%), Gaps = 14/86 (16%)
Query: 228 LYPWMRSQFER--------------KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAH 273
L WM S FER +RGRQTYTR+QTLELEKEFHFN YLTRRRRIEIAH
Sbjct: 415 LTDWMGSPFERVVCGDFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAH 474
Query: 274 ALCLTERQIKIWFQNRRMKWKKENKS 299
ALCLTERQIKIWFQNRRMK KKE ++
Sbjct: 475 ALCLTERQIKIWFQNRRMKLKKELRA 500
>gi|355750646|gb|EHH54973.1| hypothetical protein EGM_04091, partial [Macaca fascicularis]
Length = 182
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/78 (74%), Positives = 68/78 (87%), Gaps = 2/78 (2%)
Query: 222 ASLPSPLYPWMRSQFE--RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
+S PS ++PWMR Q R+RGRQTY+R+QTLELEKEF FN YLTR+RRIE++HAL LTE
Sbjct: 71 SSSPSQMFPWMRPQAAPGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALALTE 130
Query: 280 RQIKIWFQNRRMKWKKEN 297
RQ+KIWFQNRRMKWKKEN
Sbjct: 131 RQVKIWFQNRRMKWKKEN 148
>gi|198415285|ref|XP_002124598.1| PREDICTED: similar to putative homeobox protein Hox6/7 [Ciona
intestinalis]
Length = 148
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 55/61 (90%), Positives = 60/61 (98%)
Query: 238 RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 297
R+RGRQTY+R+QTLELEKEFH+NRYLTRRRRIE+AH LCLTERQIKIWFQNRRMKWKKEN
Sbjct: 74 RRRGRQTYSRHQTLELEKEFHYNRYLTRRRRIEVAHTLCLTERQIKIWFQNRRMKWKKEN 133
Query: 298 K 298
K
Sbjct: 134 K 134
>gi|402899507|ref|XP_003912736.1| PREDICTED: homeobox protein Hox-B8 [Papio anubis]
Length = 293
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/74 (78%), Positives = 66/74 (89%), Gaps = 1/74 (1%)
Query: 225 PSPLYPWMRSQFE-RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIK 283
P+ L+PWMR Q R+RGRQTY+RYQTLELEKEF FN YLTR+RRIE++HAL LTERQ+K
Sbjct: 131 PTQLFPWMRPQAAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVK 190
Query: 284 IWFQNRRMKWKKEN 297
IWFQNRRMKWKKEN
Sbjct: 191 IWFQNRRMKWKKEN 204
>gi|32367|emb|CAA28411.1| unnamed protein product [Homo sapiens]
gi|225392|prf||1301323A gene homeobox
Length = 255
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/97 (62%), Positives = 70/97 (72%), Gaps = 11/97 (11%)
Query: 213 PNQQPNNTSASLPSPLYPWMR-----------SQFERKRGRQTYTRYQTLELEKEFHFNR 261
P Q P+ T+ P+ +YPWM+ + E KR R YTR Q LELEKEFHFNR
Sbjct: 118 PKQPPSGTALKQPAVVYPWMKKVHANSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNR 177
Query: 262 YLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
YLTRRRRIEIAH LCL+ERQIKIWFQNRRMKWKK++K
Sbjct: 178 YLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 214
>gi|23397672|ref|NP_055436.2| homeobox protein Hox-D4 [Homo sapiens]
gi|20141491|sp|P09016.3|HXD4_HUMAN RecName: Full=Homeobox protein Hox-D4; AltName: Full=Homeobox
protein HHO.C13; AltName: Full=Homeobox protein Hox-4B;
AltName: Full=Homeobox protein Hox-5.1
gi|16876979|gb|AAH16763.1| Homeobox D4 [Homo sapiens]
gi|49904755|gb|AAH74797.1| Homeobox D4 [Homo sapiens]
gi|119631491|gb|EAX11086.1| homeobox D4 [Homo sapiens]
Length = 255
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/97 (62%), Positives = 70/97 (72%), Gaps = 11/97 (11%)
Query: 213 PNQQPNNTSASLPSPLYPWMR-----------SQFERKRGRQTYTRYQTLELEKEFHFNR 261
P Q P+ T+ P+ +YPWM+ + E KR R YTR Q LELEKEFHFNR
Sbjct: 118 PKQPPSGTALKQPAVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNR 177
Query: 262 YLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
YLTRRRRIEIAH LCL+ERQIKIWFQNRRMKWKK++K
Sbjct: 178 YLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 214
>gi|383849762|ref|XP_003700506.1| PREDICTED: homeobox protein abdominal-A homolog [Megachile
rotundata]
Length = 293
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/88 (70%), Positives = 67/88 (76%), Gaps = 15/88 (17%)
Query: 227 PLYPWMR-----SQFER----------KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEI 271
P YPWM S F+R +RGRQTYTR+QTLELEKEFHFN YLTRRRRIEI
Sbjct: 141 PRYPWMSITDWMSPFDRVVCGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEI 200
Query: 272 AHALCLTERQIKIWFQNRRMKWKKENKS 299
AHALCLTERQIKIWFQNRRMK KKE ++
Sbjct: 201 AHALCLTERQIKIWFQNRRMKLKKELRA 228
>gi|213511991|ref|NP_001133046.1| homeobox protein HoxB8aa [Salmo salar]
gi|157816083|gb|ABV82060.1| homeobox protein HoxB8aa [Salmo salar]
Length = 245
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/74 (77%), Positives = 66/74 (89%), Gaps = 1/74 (1%)
Query: 225 PSPLYPWMRSQFE-RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIK 283
P+ L+PWMR Q R+RGRQTY+RYQTLELEKEF FN YLTR+RRIE++HAL LTERQ+K
Sbjct: 131 PTQLFPWMRPQSAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVK 190
Query: 284 IWFQNRRMKWKKEN 297
IWFQNRRMKWK+EN
Sbjct: 191 IWFQNRRMKWKREN 204
>gi|380014418|ref|XP_003691229.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein abdominal-A
homolog [Apis florea]
Length = 395
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/101 (64%), Positives = 72/101 (71%), Gaps = 16/101 (15%)
Query: 215 QQPNNTSASLPS-PLYPWMR-----SQFER----------KRGRQTYTRYQTLELEKEFH 258
QQP S+ P YPWM S F+R +RGRQTYTR+QTLELEKEFH
Sbjct: 230 QQPTTGQPSISDIPRYPWMSITDWMSPFDRVVCGPNGCPRRRGRQTYTRFQTLELEKEFH 289
Query: 259 FNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKS 299
+N YLTRRRRIEIAHALCLTERQIKIWFQNRRMK KKE ++
Sbjct: 290 YNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKELRA 330
>gi|121222628|gb|ABM47653.1| HOXD8 [Saguinus labiatus]
Length = 195
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/77 (75%), Positives = 67/77 (87%), Gaps = 2/77 (2%)
Query: 223 SLPSPLYPWMRSQFE--RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTER 280
S PS ++PWMR Q R+RGRQTY+R+QTLELEKEF FN YLTR+RRIE++HAL LTER
Sbjct: 85 SSPSQMFPWMRPQAAPGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALALTER 144
Query: 281 QIKIWFQNRRMKWKKEN 297
Q+KIWFQNRRMKWKKEN
Sbjct: 145 QVKIWFQNRRMKWKKEN 161
>gi|383849603|ref|XP_003700434.1| PREDICTED: homeotic protein ultrabithorax-like [Megachile
rotundata]
Length = 329
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 70/98 (71%), Gaps = 8/98 (8%)
Query: 202 NQPPSQPPNQPPNQQPNNTSASLPSPLYPWMR---SQFERKRGRQTYTRYQTLELEKEFH 258
N SQP +QQP + YPWM + R+RGRQTYTRYQTLELEKEFH
Sbjct: 196 NSSASQPVATQLHQQPTGSHT-----FYPWMAIAGANGMRRRGRQTYTRYQTLELEKEFH 250
Query: 259 FNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
+ YLTRRRRIE+AH+LCLTERQIKIWFQNRRMK KKE
Sbjct: 251 TSHYLTRRRRIEMAHSLCLTERQIKIWFQNRRMKLKKE 288
>gi|58396733|gb|AAW72806.1| homeobox protein Antp, partial [Urechis unicinctus]
Length = 65
Score = 125 bits (315), Expect = 2e-26, Method: Composition-based stats.
Identities = 62/65 (95%), Positives = 63/65 (96%), Gaps = 2/65 (3%)
Query: 228 LYPWMRSQF--ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIW 285
+YPWMRSQF ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIW
Sbjct: 1 IYPWMRSQFGPERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIW 60
Query: 286 FQNRR 290
FQNRR
Sbjct: 61 FQNRR 65
>gi|1334709|emb|CAA36898.1| unnamed protein product [Gallus gallus]
Length = 225
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/99 (61%), Positives = 71/99 (71%), Gaps = 11/99 (11%)
Query: 211 QPPNQQPNNTSASLPSPLYPWMR-----------SQFERKRGRQTYTRYQTLELEKEFHF 259
QP + P+ ++ P+ +YPWM+ S E KR R YTR Q LELEKEFHF
Sbjct: 96 QPALKAPHGSAVKQPAVVYPWMKKVHVNSVNPNYSGGEPKRSRTAYTRQQVLELEKEFHF 155
Query: 260 NRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
NRYLTRRRRIEIAH LCL+ERQIKIWFQNRRMKWKK++K
Sbjct: 156 NRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 194
>gi|426337816|ref|XP_004032892.1| PREDICTED: homeobox protein Hox-D8 [Gorilla gorilla gorilla]
Length = 213
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/78 (74%), Positives = 68/78 (87%), Gaps = 2/78 (2%)
Query: 222 ASLPSPLYPWMRSQFE--RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
+S PS ++PWMR Q R+RGRQTY+R+QTLELEKEF FN YLTR+RRIE++HAL LTE
Sbjct: 102 SSSPSQMFPWMRPQAAPGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALALTE 161
Query: 280 RQIKIWFQNRRMKWKKEN 297
RQ+KIWFQNRRMKWKKEN
Sbjct: 162 RQVKIWFQNRRMKWKKEN 179
>gi|328778463|ref|XP_394120.4| PREDICTED: homeobox protein abdominal-A homolog isoform 1 [Apis
mellifera]
Length = 396
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/101 (64%), Positives = 72/101 (71%), Gaps = 16/101 (15%)
Query: 215 QQPNNTSASLPS-PLYPWMR-----SQFER----------KRGRQTYTRYQTLELEKEFH 258
QQP S+ P YPWM S F+R +RGRQTYTR+QTLELEKEFH
Sbjct: 230 QQPTTGQPSISDIPRYPWMSITDWMSPFDRVVCGPNGCPRRRGRQTYTRFQTLELEKEFH 289
Query: 259 FNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKS 299
+N YLTRRRRIEIAHALCLTERQIKIWFQNRRMK KKE ++
Sbjct: 290 YNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKELRA 330
>gi|387231501|gb|AFJ72461.1| homeobox B6, partial [Rhinolophus affinis]
Length = 79
Score = 125 bits (315), Expect = 2e-26, Method: Composition-based stats.
Identities = 57/60 (95%), Positives = 60/60 (100%)
Query: 239 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
+RGRQTYTRYQTLELEKEFH+NRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE+K
Sbjct: 2 RRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKESK 61
>gi|307213518|gb|EFN88927.1| Homeotic protein Sex combs reduced [Harpegnathos saltator]
Length = 120
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/62 (91%), Positives = 59/62 (95%)
Query: 237 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
E KR R +YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE
Sbjct: 27 ETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 86
Query: 297 NK 298
+K
Sbjct: 87 HK 88
>gi|12854614|dbj|BAB30086.1| unnamed protein product [Mus musculus]
Length = 218
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/78 (73%), Positives = 67/78 (85%), Gaps = 2/78 (2%)
Query: 222 ASLPSPLYPWMRSQFE--RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
+S PS ++PWMR Q R+RGRQTY+R+QTLELEKEF FN YLTR+RRIE++H L LTE
Sbjct: 106 SSSPSQMFPWMRPQAAPGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHTLALTE 165
Query: 280 RQIKIWFQNRRMKWKKEN 297
RQ+KIWFQNRRMKWKKEN
Sbjct: 166 RQVKIWFQNRRMKWKKEN 183
>gi|59939334|gb|AAX12426.1| Dbuz\abd-A-PA [Drosophila buzzatii]
Length = 331
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/86 (70%), Positives = 65/86 (75%), Gaps = 14/86 (16%)
Query: 228 LYPWMRSQFER--------------KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAH 273
L WM S FER +RGRQTYTR+QTLELEKEFHFN YLTRRRRIEIAH
Sbjct: 112 LTDWMGSPFERVVCGDFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAH 171
Query: 274 ALCLTERQIKIWFQNRRMKWKKENKS 299
ALCLTERQIKIWFQNRRMK KKE ++
Sbjct: 172 ALCLTERQIKIWFQNRRMKLKKELRA 197
>gi|229577325|ref|NP_571256.1| homeobox protein Hox-B8b [Danio rerio]
gi|60392414|sp|Q8JH55.1|HXB8B_DANRE RecName: Full=Homeobox protein Hox-B8b; AltName: Full=Homeobox
protein Hox-A8
gi|22316134|emb|CAD44456.1| homeo box protein B8b [Danio rerio]
gi|190337844|gb|AAI62153.1| Homeo box B8b [Danio rerio]
gi|190338644|gb|AAI62167.1| Homeo box B8b [Danio rerio]
Length = 247
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/75 (78%), Positives = 66/75 (88%), Gaps = 2/75 (2%)
Query: 228 LYPWMRSQFE-RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
L+PWMR Q R+RGRQTY+RYQTLELEKEF FN YLTR+RRIE++HAL LTERQ+KIWF
Sbjct: 134 LFPWMRPQATGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALALTERQVKIWF 193
Query: 287 QNRRMKWKKE-NKSK 300
QNRRMKWKKE NK K
Sbjct: 194 QNRRMKWKKEHNKDK 208
>gi|410969016|ref|XP_003990994.1| PREDICTED: homeobox protein Hox-D8 [Felis catus]
Length = 269
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/78 (74%), Positives = 68/78 (87%), Gaps = 2/78 (2%)
Query: 222 ASLPSPLYPWMRSQFE--RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
+S PS ++PWMR Q R+RGRQTY+R+QTLELEKEF FN YLTR+RRIE++HAL LTE
Sbjct: 158 SSSPSQMFPWMRPQAAPGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALALTE 217
Query: 280 RQIKIWFQNRRMKWKKEN 297
RQ+KIWFQNRRMKWKKEN
Sbjct: 218 RQVKIWFQNRRMKWKKEN 235
>gi|340727731|ref|XP_003402191.1| PREDICTED: homeobox protein abdominal-A homolog isoform 3 [Bombus
terrestris]
Length = 399
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/92 (67%), Positives = 67/92 (72%), Gaps = 19/92 (20%)
Query: 227 PLYPWMR-----SQFER--------------KRGRQTYTRYQTLELEKEFHFNRYLTRRR 267
P YPWM S F+R +RGRQTYTR+QTLELEKEFHFN YLTRRR
Sbjct: 243 PRYPWMSITDWMSPFDRVVCGDFRGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRR 302
Query: 268 RIEIAHALCLTERQIKIWFQNRRMKWKKENKS 299
RIEIAHALCLTERQIKIWFQNRRMK KKE ++
Sbjct: 303 RIEIAHALCLTERQIKIWFQNRRMKLKKELRA 334
>gi|385654457|gb|AFI61961.1| Hox-A7a, partial [Anguilla japonica]
Length = 102
Score = 125 bits (315), Expect = 2e-26, Method: Composition-based stats.
Identities = 61/76 (80%), Positives = 66/76 (86%)
Query: 240 RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKS 299
RGRQTY+RYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKK++K+
Sbjct: 1 RGRQTYSRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKDHKA 60
Query: 300 KDGGSDAGSDITPATS 315
G +G D A S
Sbjct: 61 DGPGPGSGPDSAVAAS 76
>gi|328710879|ref|XP_001944459.2| PREDICTED: homeotic protein ultrabithorax-like [Acyrthosiphon
pisum]
Length = 339
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/72 (80%), Positives = 61/72 (84%), Gaps = 3/72 (4%)
Query: 228 LYPWMR---SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKI 284
YPWM + R+RGRQTYTRYQTLELEKEFH N YLTRRRRIE+AHALCLTERQIKI
Sbjct: 237 FYPWMAIAGANGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKI 296
Query: 285 WFQNRRMKWKKE 296
WFQNRRMK KKE
Sbjct: 297 WFQNRRMKLKKE 308
>gi|17136422|ref|NP_476693.1| abdominal A, isoform A [Drosophila melanogaster]
gi|281361946|ref|NP_001163632.1| abdominal A, isoform C [Drosophila melanogaster]
gi|386765930|ref|NP_001247145.1| abdominal A, isoform D [Drosophila melanogaster]
gi|7523|emb|CAA38321.1| homeobox protein [Drosophila melanogaster]
gi|969084|gb|AAA84406.1| ABD-AI [Drosophila melanogaster]
gi|7300194|gb|AAF55359.1| abdominal A, isoform A [Drosophila melanogaster]
gi|54650674|gb|AAV36916.1| RE04174p [Drosophila melanogaster]
gi|220953476|gb|ACL89281.1| abd-A-PA [synthetic construct]
gi|272477023|gb|ACZ94928.1| abdominal A, isoform C [Drosophila melanogaster]
gi|383292756|gb|AFH06463.1| abdominal A, isoform D [Drosophila melanogaster]
Length = 330
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/86 (70%), Positives = 65/86 (75%), Gaps = 14/86 (16%)
Query: 228 LYPWMRSQFER--------------KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAH 273
L WM S FER +RGRQTYTR+QTLELEKEFHFN YLTRRRRIEIAH
Sbjct: 114 LTDWMGSPFERVVCGDFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAH 173
Query: 274 ALCLTERQIKIWFQNRRMKWKKENKS 299
ALCLTERQIKIWFQNRRMK KKE ++
Sbjct: 174 ALCLTERQIKIWFQNRRMKLKKELRA 199
>gi|327263836|ref|XP_003216723.1| PREDICTED: homeobox protein Hox-C5-like [Anolis carolinensis]
Length = 234
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/78 (73%), Positives = 64/78 (82%), Gaps = 5/78 (6%)
Query: 228 LYPWMRS-----QFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQI 282
+YPWM + + KR R +YTRYQTLELEKEFHFNRYLTRRRRIEIA+ LCL ERQI
Sbjct: 152 IYPWMTKLHMSHEADGKRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQI 211
Query: 283 KIWFQNRRMKWKKENKSK 300
KIWFQNRRMKWKK++K K
Sbjct: 212 KIWFQNRRMKWKKDSKLK 229
>gi|165873667|gb|ABY67958.1| lox4 hox protein [Capitella teleta]
Length = 257
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/74 (78%), Positives = 63/74 (85%), Gaps = 4/74 (5%)
Query: 227 PLYPWMR----SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQI 282
P YPWM + +R+RGRQTY+RYQTLELEKEF FN YLTR+RRIEIAHALCLTERQI
Sbjct: 148 PFYPWMGVVXPNSSQRRRGRQTYSRYQTLELEKEFQFNHYLTRKRRIEIAHALCLTERQI 207
Query: 283 KIWFQNRRMKWKKE 296
KIWFQNRRMK KKE
Sbjct: 208 KIWFQNRRMKLKKE 221
>gi|344266087|ref|XP_003405112.1| PREDICTED: homeobox protein Hox-C5-like [Loxodonta africana]
Length = 222
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/79 (72%), Positives = 64/79 (81%), Gaps = 5/79 (6%)
Query: 228 LYPWMRS-----QFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQI 282
+YPWM + + KR R +YTRYQTLELEKEFHFNRYLTRRRRIEIA+ LCL ERQI
Sbjct: 140 IYPWMTKLHMSHETDGKRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQI 199
Query: 283 KIWFQNRRMKWKKENKSKD 301
KIWFQNRRMKWKK++K K
Sbjct: 200 KIWFQNRRMKWKKDSKMKS 218
>gi|166429526|ref|NP_001107632.1| ultrabithorax [Bombyx mori]
gi|164682496|gb|ABY66345.1| homeobox protein [Bombyx mori]
gi|284924982|dbj|BAI67747.1| Ultrabithorax [Bombyx mori]
Length = 254
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/89 (71%), Positives = 69/89 (77%), Gaps = 9/89 (10%)
Query: 211 QPPNQQPNNTSASLPSPLYPWMR---SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRR 267
QP +QQP N + YPWM + R+RGRQTYTRYQTLELEKEFH N YLTRRR
Sbjct: 136 QPVHQQPTNHT------FYPWMAIAGANGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRR 189
Query: 268 RIEIAHALCLTERQIKIWFQNRRMKWKKE 296
RIE+AHALCLTERQIKIWFQNRRMK KKE
Sbjct: 190 RIEMAHALCLTERQIKIWFQNRRMKLKKE 218
>gi|164682494|gb|ABY66344.1| homeobox protein [Bombyx mori]
Length = 254
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/89 (71%), Positives = 69/89 (77%), Gaps = 9/89 (10%)
Query: 211 QPPNQQPNNTSASLPSPLYPWMR---SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRR 267
QP +QQP N + YPWM + R+RGRQTYTRYQTLELEKEFH N YLTRRR
Sbjct: 136 QPVHQQPTNHT------FYPWMAIAGANGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRR 189
Query: 268 RIEIAHALCLTERQIKIWFQNRRMKWKKE 296
RIE+AHALCLTERQIKIWFQNRRMK KKE
Sbjct: 190 RIEMAHALCLTERQIKIWFQNRRMKLKKE 218
>gi|21389045|gb|AAM50457.1|AF393441_1 sex comb reduced [Sacculina carcini]
Length = 125
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/68 (83%), Positives = 62/68 (91%)
Query: 237 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
E KR R +YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQ+KIWFQNRRMKWKKE
Sbjct: 7 ETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQVKIWFQNRRMKWKKE 66
Query: 297 NKSKDGGS 304
+K + G+
Sbjct: 67 HKMANMGT 74
>gi|259053113|emb|CAX11343.1| abdominal A [Parasteatoda tepidariorum]
Length = 250
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/82 (73%), Positives = 64/82 (78%), Gaps = 9/82 (10%)
Query: 227 PLYPWMRSQFE---------RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 277
P YPWM R+RGRQTYTR+QTLELEKEFHFN YLTRRRRIEIAHALCL
Sbjct: 107 PRYPWMSIAALNFAGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCL 166
Query: 278 TERQIKIWFQNRRMKWKKENKS 299
TERQIKIWFQNRRMK KKE ++
Sbjct: 167 TERQIKIWFQNRRMKLKKEMRA 188
>gi|300797993|ref|NP_001178280.1| homeobox protein Hox-C5 [Bos taurus]
gi|296487931|tpg|DAA30044.1| TPA: homeobox C5-like [Bos taurus]
gi|440900712|gb|ELR51790.1| Homeobox protein Hox-C5 [Bos grunniens mutus]
Length = 222
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/79 (72%), Positives = 64/79 (81%), Gaps = 5/79 (6%)
Query: 228 LYPWMRS-----QFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQI 282
+YPWM + + KR R +YTRYQTLELEKEFHFNRYLTRRRRIEIA+ LCL ERQI
Sbjct: 140 IYPWMTKLHMSHETDGKRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQI 199
Query: 283 KIWFQNRRMKWKKENKSKD 301
KIWFQNRRMKWKK++K K
Sbjct: 200 KIWFQNRRMKWKKDSKMKS 218
>gi|431921604|gb|ELK18956.1| Homeobox protein Hox-C5 [Pteropus alecto]
Length = 222
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/79 (72%), Positives = 64/79 (81%), Gaps = 5/79 (6%)
Query: 228 LYPWMRS-----QFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQI 282
+YPWM + + KR R +YTRYQTLELEKEFHFNRYLTRRRRIEIA+ LCL ERQI
Sbjct: 140 IYPWMTKLHMSHETDGKRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQI 199
Query: 283 KIWFQNRRMKWKKENKSKD 301
KIWFQNRRMKWKK++K K
Sbjct: 200 KIWFQNRRMKWKKDSKMKS 218
>gi|321475838|gb|EFX86800.1| putative homeotic abdominal-A protein [Daphnia pulex]
Length = 383
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/62 (90%), Positives = 59/62 (95%)
Query: 238 RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 297
R+RGRQTYTRYQTLELEKEFHFN YLTRRRRIEIAHALCLTERQIKIWFQNRRMK KKE
Sbjct: 222 RRRGRQTYTRYQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKEL 281
Query: 298 KS 299
++
Sbjct: 282 RA 283
>gi|21389053|gb|AAM50461.1|AF393445_1 sex comb reduced [Sacculina carcini]
Length = 98
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/66 (86%), Positives = 61/66 (92%)
Query: 239 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
KR R +YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE+K
Sbjct: 9 KRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHK 68
Query: 299 SKDGGS 304
+ G+
Sbjct: 69 MANMGT 74
>gi|28376623|ref|NP_783857.1| homeobox protein Hox-C5 [Mus musculus]
gi|157822081|ref|NP_001101586.1| homeo box C5 [Rattus norvegicus]
gi|149714970|ref|XP_001504605.1| PREDICTED: homeobox protein Hox-C5-like [Equus caballus]
gi|297692045|ref|XP_002823377.1| PREDICTED: homeobox protein Hox-C5 [Pongo abelii]
gi|311255483|ref|XP_003126250.1| PREDICTED: homeobox protein Hox-C5-like [Sus scrofa]
gi|332207730|ref|XP_003252949.1| PREDICTED: homeobox protein Hox-C5 [Nomascus leucogenys]
gi|335287896|ref|XP_003355471.1| PREDICTED: homeobox protein Hox-C5-like [Sus scrofa]
gi|410964589|ref|XP_003988836.1| PREDICTED: homeobox protein Hox-C5 [Felis catus]
gi|114152822|sp|P32043.3|HXC5_MOUSE RecName: Full=Homeobox protein Hox-C5; AltName: Full=Homeobox
protein Hox-3.4; AltName: Full=Homeobox protein Hox-6.2
gi|26347351|dbj|BAC37324.1| unnamed protein product [Mus musculus]
gi|109731984|gb|AAI15552.1| Homeo box C5 [Mus musculus]
gi|109731987|gb|AAI15553.1| Homeo box C5 [Mus musculus]
gi|148671995|gb|EDL03942.1| homeobox C5 [Mus musculus]
gi|149031889|gb|EDL86801.1| homeo box C5 (predicted) [Rattus norvegicus]
gi|355564297|gb|EHH20797.1| Homeobox protein Hox-3D [Macaca mulatta]
gi|355786155|gb|EHH66338.1| Homeobox protein Hox-3D [Macaca fascicularis]
Length = 222
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/79 (72%), Positives = 64/79 (81%), Gaps = 5/79 (6%)
Query: 228 LYPWMRS-----QFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQI 282
+YPWM + + KR R +YTRYQTLELEKEFHFNRYLTRRRRIEIA+ LCL ERQI
Sbjct: 140 IYPWMTKLHMSHETDGKRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQI 199
Query: 283 KIWFQNRRMKWKKENKSKD 301
KIWFQNRRMKWKK++K K
Sbjct: 200 KIWFQNRRMKWKKDSKMKS 218
>gi|395835049|ref|XP_003790497.1| PREDICTED: homeobox protein Hox-C5 [Otolemur garnettii]
Length = 222
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/79 (72%), Positives = 64/79 (81%), Gaps = 5/79 (6%)
Query: 228 LYPWMRS-----QFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQI 282
+YPWM + + KR R +YTRYQTLELEKEFHFNRYLTRRRRIEIA+ LCL ERQI
Sbjct: 140 IYPWMTKLHMSHETDGKRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQI 199
Query: 283 KIWFQNRRMKWKKENKSKD 301
KIWFQNRRMKWKK++K K
Sbjct: 200 KIWFQNRRMKWKKDSKMKS 218
>gi|432112557|gb|ELK35273.1| Homeobox protein Hox-C5 [Myotis davidii]
Length = 222
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/79 (72%), Positives = 64/79 (81%), Gaps = 5/79 (6%)
Query: 228 LYPWMRS-----QFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQI 282
+YPWM + + KR R +YTRYQTLELEKEFHFNRYLTRRRRIEIA+ LCL ERQI
Sbjct: 140 IYPWMTKLHMSHETDGKRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQI 199
Query: 283 KIWFQNRRMKWKKENKSKD 301
KIWFQNRRMKWKK++K K
Sbjct: 200 KIWFQNRRMKWKKDSKMKS 218
>gi|28629653|gb|AAO43032.1| HoxB7 [Latimeria menadoensis]
Length = 82
Score = 125 bits (314), Expect = 2e-26, Method: Composition-based stats.
Identities = 60/63 (95%), Positives = 63/63 (100%)
Query: 237 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
+RKRGRQTYTRYQTLELEKEFH+NRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE
Sbjct: 2 DRKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 61
Query: 297 NKS 299
NK+
Sbjct: 62 NKT 64
>gi|195570298|ref|XP_002103144.1| ultrabithorax [Drosophila simulans]
gi|194199071|gb|EDX12647.1| ultrabithorax [Drosophila simulans]
Length = 338
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/73 (79%), Positives = 61/73 (83%), Gaps = 3/73 (4%)
Query: 227 PLYPWMR---SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIK 283
YPWM + R+RGRQTYTRYQTLELEKEFH N YLTRRRRIE+AHALCLTERQIK
Sbjct: 230 TFYPWMAIAGTNGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIK 289
Query: 284 IWFQNRRMKWKKE 296
IWFQNRRMK KKE
Sbjct: 290 IWFQNRRMKLKKE 302
>gi|1574928|gb|AAB09405.1| HEHBOX6, partial [Heliocidaris erythrogramma]
Length = 109
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/73 (78%), Positives = 64/73 (87%), Gaps = 1/73 (1%)
Query: 237 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
+RKRGRQTYTR QTLELEKEFH+NRYLTR+RRIEIA A+CL+ERQIKIWFQNRRMKWKKE
Sbjct: 7 DRKRGRQTYTRAQTLELEKEFHYNRYLTRKRRIEIAQAVCLSERQIKIWFQNRRMKWKKE 66
Query: 297 NKSKDGGSDAGSD 309
+ +DG D D
Sbjct: 67 -RVRDGIGDDEDD 78
>gi|301776116|ref|XP_002923476.1| PREDICTED: homeobox protein Hox-C5-like [Ailuropoda melanoleuca]
gi|281342178|gb|EFB17762.1| hypothetical protein PANDA_012615 [Ailuropoda melanoleuca]
Length = 222
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/79 (72%), Positives = 64/79 (81%), Gaps = 5/79 (6%)
Query: 228 LYPWMRS-----QFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQI 282
+YPWM + + KR R +YTRYQTLELEKEFHFNRYLTRRRRIEIA+ LCL ERQI
Sbjct: 140 IYPWMTKLHMSHETDGKRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQI 199
Query: 283 KIWFQNRRMKWKKENKSKD 301
KIWFQNRRMKWKK++K K
Sbjct: 200 KIWFQNRRMKWKKDSKMKS 218
>gi|6252867|dbj|BAA86245.1| HOXB5B [Oryzias latipes]
gi|62958665|gb|AAY23654.1| Hox protein [Oreochromis niloticus]
Length = 81
Score = 125 bits (314), Expect = 2e-26, Method: Composition-based stats.
Identities = 56/62 (90%), Positives = 58/62 (93%)
Query: 239 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+ERQIKIWFQNRRMKWKK+NK
Sbjct: 7 KRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNK 66
Query: 299 SK 300
K
Sbjct: 67 LK 68
>gi|444513900|gb|ELV10485.1| Homeobox protein Hox-C5 [Tupaia chinensis]
Length = 222
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/79 (72%), Positives = 64/79 (81%), Gaps = 5/79 (6%)
Query: 228 LYPWMRS-----QFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQI 282
+YPWM + + KR R +YTRYQTLELEKEFHFNRYLTRRRRIEIA+ LCL ERQI
Sbjct: 140 IYPWMTKLHMSHETDGKRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQI 199
Query: 283 KIWFQNRRMKWKKENKSKD 301
KIWFQNRRMKWKK++K K
Sbjct: 200 KIWFQNRRMKWKKDSKMKS 218
>gi|256014529|gb|ACU56819.1| HOXB7 [Pantherophis spiloides]
Length = 129
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 68/88 (77%), Gaps = 1/88 (1%)
Query: 205 PSQPPNQPPNQQPNNTSASLPSPLYPWMRSQ-FERKRGRQTYTRYQTLELEKEFHFNRYL 263
S+P +Q+ + +YPWMRS +RKRGRQTYTRYQTLEL KEFH+NRYL
Sbjct: 42 ASKPNCNKSDQRDTDLRHESNLRIYPWMRSTGTDRKRGRQTYTRYQTLELGKEFHYNRYL 101
Query: 264 TRRRRIEIAHALCLTERQIKIWFQNRRM 291
TRRRRIEIAHALCLTERQIKIWFQNRRM
Sbjct: 102 TRRRRIEIAHALCLTERQIKIWFQNRRM 129
>gi|325260875|gb|ADZ04665.1| homeobox C5 [Notophthalmus viridescens]
Length = 223
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/78 (73%), Positives = 64/78 (82%), Gaps = 5/78 (6%)
Query: 228 LYPWMRS-----QFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQI 282
+YPWM + + KR R +YTRYQTLELEKEFHFNRYLTRRRRIEIA+ LCL ERQI
Sbjct: 141 IYPWMTKLHMSHETDGKRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQI 200
Query: 283 KIWFQNRRMKWKKENKSK 300
KIWFQNRRMKWKK++K K
Sbjct: 201 KIWFQNRRMKWKKDSKLK 218
>gi|87042406|gb|ABD16212.1| ultrabithorax [Strigamia maritima]
Length = 267
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/72 (80%), Positives = 61/72 (84%), Gaps = 3/72 (4%)
Query: 228 LYPWMR---SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKI 284
YPWM + R+RGRQTYTRYQTLELEKEFH N YLTRRRRIE+AHALCLTERQIKI
Sbjct: 153 FYPWMAIAGANGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKI 212
Query: 285 WFQNRRMKWKKE 296
WFQNRRMK KKE
Sbjct: 213 WFQNRRMKLKKE 224
>gi|45384234|ref|NP_990624.1| homeobox protein Hox-B4 [Gallus gallus]
gi|123264|sp|P14840.1|HXB4_CHICK RecName: Full=Homeobox protein Hox-B4; AltName: Full=Homeobox
protein Hox-Z; Short=Chox-Z
gi|63505|emb|CAA35614.1| unnamed protein product [Gallus gallus]
Length = 245
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/109 (60%), Positives = 77/109 (70%), Gaps = 13/109 (11%)
Query: 201 PNQPPSQPPNQPPNQQPNNTSASLPSPLYPWMR-----------SQFERKRGRQTYTRYQ 249
P+ PPS N NQ P+N+S P +YPWM+ S E KR R YTR Q
Sbjct: 104 PSPPPSCSQNSL-NQSPSNSSCKEPV-VYPWMKKVHVSTVNPNYSGGEPKRSRTAYTRQQ 161
Query: 250 TLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
LELEKEFH+NRYLTRRRR+EIAH+LCL+ERQIKIWFQNRRMKWKK++K
Sbjct: 162 VLELEKEFHYNRYLTRRRRVEIAHSLCLSERQIKIWFQNRRMKWKKDHK 210
>gi|220898206|gb|ACL81460.1| HoxC5 [Latimeria menadoensis]
Length = 222
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/78 (73%), Positives = 63/78 (80%), Gaps = 5/78 (6%)
Query: 228 LYPWMRS-----QFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQI 282
+YPWM + KR R +YTRYQTLELEKEFHFNRYLTRRRRIEIA+ LCL ERQI
Sbjct: 140 IYPWMTKLHMSHDTDGKRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQI 199
Query: 283 KIWFQNRRMKWKKENKSK 300
KIWFQNRRMKWKK++K K
Sbjct: 200 KIWFQNRRMKWKKDSKLK 217
>gi|332024156|gb|EGI64372.1| Homeotic protein Sex combs reduced [Acromyrmex echinatior]
Length = 236
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/62 (91%), Positives = 59/62 (95%)
Query: 237 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
E KR R +YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE
Sbjct: 143 ETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 202
Query: 297 NK 298
+K
Sbjct: 203 HK 204
>gi|387231421|gb|AFJ72421.1| homeobox B5, partial [Miniopterus schreibersii]
gi|387231453|gb|AFJ72437.1| homeobox B5, partial [Hipposideros larvatus]
Length = 74
Score = 125 bits (314), Expect = 3e-26, Method: Composition-based stats.
Identities = 59/74 (79%), Positives = 62/74 (83%), Gaps = 1/74 (1%)
Query: 240 RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKS 299
R R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+ERQIKIWFQNRRMKWKK+NK
Sbjct: 1 RARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNKL 60
Query: 300 KDGG-SDAGSDITP 312
K + AGS P
Sbjct: 61 KSMSLATAGSAFQP 74
>gi|258678267|gb|ACV87740.1| central class Hox protein [Convolutriloba longifissura]
Length = 239
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 55/77 (71%), Positives = 62/77 (80%), Gaps = 2/77 (2%)
Query: 226 SPLYPWMRSQ--FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIK 283
S ++ WM + + KR R YTR+QTLELEKEFHFNRYLTRRRRIEIA+ L LTERQIK
Sbjct: 152 SKMFAWMSKRPPTDCKRTRTAYTRFQTLELEKEFHFNRYLTRRRRIEIANLLALTERQIK 211
Query: 284 IWFQNRRMKWKKENKSK 300
IWFQNRRMKWKK+N K
Sbjct: 212 IWFQNRRMKWKKDNNLK 228
>gi|255742477|gb|ACU32589.1| homeobox protein HoxD4 [Callorhinchus milii]
Length = 238
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/125 (56%), Positives = 79/125 (63%), Gaps = 22/125 (17%)
Query: 196 HQQTPPNQPPSQPPNQ-----PPNQQP------NNTSASLPSPLYPWMR----------- 233
HQ P QP + P Q P NQQ N T+ P+ +YPWM+
Sbjct: 82 HQIPLPGQPEAGAPLQVSTARPCNQQQHNARNQNGTATKQPAVVYPWMKKIHVNNVNPNY 141
Query: 234 SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKW 293
+ E KR R YTR Q LELEKEFHFNRYLTRRRRIEIAH LCL+ERQIKIWFQNRRMKW
Sbjct: 142 TGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKW 201
Query: 294 KKENK 298
KK++K
Sbjct: 202 KKDHK 206
>gi|120974711|gb|ABM46720.1| HOXD8 [Gorilla gorilla]
Length = 177
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/77 (75%), Positives = 67/77 (87%), Gaps = 2/77 (2%)
Query: 223 SLPSPLYPWMRSQFE--RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTER 280
S PS ++PWMR Q R+RGRQTY+R+QTLELEKEF FN YLTR+RRIE++HAL LTER
Sbjct: 67 SSPSQMFPWMRPQAAPGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALALTER 126
Query: 281 QIKIWFQNRRMKWKKEN 297
Q+KIWFQNRRMKWKKEN
Sbjct: 127 QVKIWFQNRRMKWKKEN 143
>gi|410896924|ref|XP_003961949.1| PREDICTED: homeobox protein Hox-D4a-like [Takifugu rubripes]
Length = 274
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 60/92 (65%), Positives = 67/92 (72%), Gaps = 11/92 (11%)
Query: 218 NNTSASLPSPLYPWMR-----------SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRR 266
N T A P+ +YPWM+ + E KR R YTR Q LELEKEFHFNRYLTRR
Sbjct: 155 NGTQAKQPAVVYPWMKKVHVTTVNPDYTGSEPKRSRTAYTRQQVLELEKEFHFNRYLTRR 214
Query: 267 RRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
RRIEIAH LCL+ERQIKIWFQNRRMKWKK++K
Sbjct: 215 RRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 246
>gi|38004412|gb|AAR07505.1| Abd-A-like protein [Schistosoma mansoni]
Length = 718
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/84 (69%), Positives = 69/84 (82%), Gaps = 5/84 (5%)
Query: 218 NNTSASL-PSPLYPWMR----SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIA 272
N+ +SL P+ ++PWM + +R+RGRQTY+RYQTLELEKEF ++ YLTRRRRIEIA
Sbjct: 488 NSVRSSLSPTHIWPWMTVVGPNSVQRRRGRQTYSRYQTLELEKEFQYSHYLTRRRRIEIA 547
Query: 273 HALCLTERQIKIWFQNRRMKWKKE 296
H LCLTERQIKIWFQNRRMK KKE
Sbjct: 548 HNLCLTERQIKIWFQNRRMKLKKE 571
>gi|395519829|ref|XP_003764044.1| PREDICTED: homeobox protein Hox-D8, partial [Sarcophilus harrisii]
Length = 184
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/78 (74%), Positives = 68/78 (87%), Gaps = 2/78 (2%)
Query: 222 ASLPSPLYPWMRSQFE--RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
+S PS ++PWMR Q R+RGRQTY+R+QTLELEKEF FN YLTR+RRIE++HAL LTE
Sbjct: 73 SSSPSQMFPWMRPQAAPGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALGLTE 132
Query: 280 RQIKIWFQNRRMKWKKEN 297
RQ+KIWFQNRRMKWKKEN
Sbjct: 133 RQVKIWFQNRRMKWKKEN 150
>gi|351706133|gb|EHB09052.1| Homeobox protein Hox-C5 [Heterocephalus glaber]
Length = 222
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 57/79 (72%), Positives = 64/79 (81%), Gaps = 5/79 (6%)
Query: 228 LYPWMRS-----QFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQI 282
+YPWM + + KR R +YTRYQTLELEKEFHFNRYLTRRRRIEIA+ LCL ERQI
Sbjct: 140 IYPWMTKLHMSHETDGKRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQI 199
Query: 283 KIWFQNRRMKWKKENKSKD 301
KIWFQNRRMKWKK++K K
Sbjct: 200 KIWFQNRRMKWKKDSKMKS 218
>gi|347972377|ref|XP_003436886.1| AGAP004662-PB [Anopheles gambiae str. PEST]
gi|333467596|gb|EGK96614.1| AGAP004662-PB [Anopheles gambiae str. PEST]
Length = 370
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 55/62 (88%), Positives = 59/62 (95%)
Query: 238 RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 297
R+RGRQTYTR+QTLELEKEFHFN YLTRRRRIEIAHALCLTERQIKIWFQNRRMK KKE
Sbjct: 200 RRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKEL 259
Query: 298 KS 299
++
Sbjct: 260 RA 261
>gi|123424|sp|P09636.1|HXA7_SALSA RecName: Full=Homeobox protein Hox-A7; AltName: Full=Homeobox
protein S12-A
gi|213798|gb|AAA49559.1| homeo box protein, partial [Salmo salar]
Length = 75
Score = 125 bits (314), Expect = 3e-26, Method: Composition-based stats.
Identities = 56/61 (91%), Positives = 59/61 (96%)
Query: 238 RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 297
RKRG QTYTRYQTLELEKEFHFNRYLTRRRR+EIAH LCLTERQIKIWFQNRRMKWKK++
Sbjct: 1 RKRGSQTYTRYQTLELEKEFHFNRYLTRRRRVEIAHVLCLTERQIKIWFQNRRMKWKKDH 60
Query: 298 K 298
K
Sbjct: 61 K 61
>gi|291405871|ref|XP_002719360.1| PREDICTED: homeobox B5 [Oryctolagus cuniculus]
Length = 269
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 104/327 (31%), Positives = 133/327 (40%), Gaps = 73/327 (22%)
Query: 1 MSSYFANSYMPDIKNGGVLPPEHHQQHHYGATVLPQNNGVEDPSMYDPRQVHHYGQVPNN 60
MSSYF NS+ NG P++ +L +G Y H G N
Sbjct: 1 MSSYFVNSFSGRYPNG----PDYQ--------LLNYGSGSSLSGSYRDPAAMHTGSYGYN 48
Query: 61 GQPVHGMPYPRFPPYDRMDIR------NAAYYGAHEGGMEQYPRPDSPSMGHMGPQNGHQ 114
Y+ MD+ +++++GA G +P P +
Sbjct: 49 --------------YNGMDLSVNRSSASSSHFGAVGEGSRAFPAPAQEPRFRQAASSCSL 94
Query: 115 TPVVYASCKLQAAVGNGIIPGPESPNDLVDPTLNNHHHHQHHHMNHHPHPHPQQQQPQQP 174
+ C +G P SP+D P ++ + + + P Q P
Sbjct: 95 SSPESLPCT--NGDSHGAKPSASSPSDQAAPASSSANFTEIDEASASSEPEEAASQLGSP 152
Query: 175 PPQHMMYAQQPPPQHHQVVVNHQQTPPNQPPSQPPNQPPNQQPNNTSASLPSPLYPWMRS 234
+ QP P QTP ++PWMR
Sbjct: 153 S----LARAQPEPMATSTAAPEGQTP--------------------------QIFPWMRK 182
Query: 235 QF--------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+ KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+ERQIKIWF
Sbjct: 183 LHISHDMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWF 242
Query: 287 QNRRMKWKKENKSKDGG-SDAGSDITP 312
QNRRMKWKK+NK K + AGS P
Sbjct: 243 QNRRMKWKKDNKLKSMSLATAGSAFQP 269
>gi|426224342|ref|XP_004006330.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-C5 [Ovis
aries]
Length = 227
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 57/79 (72%), Positives = 64/79 (81%), Gaps = 5/79 (6%)
Query: 228 LYPWMRS-----QFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQI 282
+YPWM + + KR R +YTRYQTLELEKEFHFNRYLTRRRRIEIA+ LCL ERQI
Sbjct: 145 IYPWMTKLHMSHETDGKRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQI 204
Query: 283 KIWFQNRRMKWKKENKSKD 301
KIWFQNRRMKWKK++K K
Sbjct: 205 KIWFQNRRMKWKKDSKMKS 223
>gi|9247202|gb|AAA41342.2| homeobox protein [Rattus norvegicus]
Length = 103
Score = 125 bits (313), Expect = 3e-26, Method: Composition-based stats.
Identities = 58/62 (93%), Positives = 61/62 (98%)
Query: 238 RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 297
RKRGRQTYTRYQTLELEKEFH+NRYLTRRRRIEIAH +CLTERQIKIWFQNRRMKWKKEN
Sbjct: 1 RKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHGVCLTERQIKIWFQNRRMKWKKEN 60
Query: 298 KS 299
K+
Sbjct: 61 KT 62
>gi|45553381|ref|NP_996219.1| ultrabithorax, isoform F [Drosophila melanogaster]
gi|45446510|gb|AAS65158.1| ultrabithorax, isoform F [Drosophila melanogaster]
Length = 355
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/81 (72%), Positives = 61/81 (75%), Gaps = 12/81 (14%)
Query: 228 LYPWMRSQFE------------RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHAL 275
YPWM E R+RGRQTYTRYQTLELEKEFH N YLTRRRRIE+AHAL
Sbjct: 239 FYPWMAIAGECPEDPTKSTNGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHAL 298
Query: 276 CLTERQIKIWFQNRRMKWKKE 296
CLTERQIKIWFQNRRMK KKE
Sbjct: 299 CLTERQIKIWFQNRRMKLKKE 319
>gi|387862364|gb|AFK08968.1| ultrabithorax variant a, partial [Bicyclus anynana]
Length = 234
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 64/96 (66%), Positives = 69/96 (71%), Gaps = 9/96 (9%)
Query: 204 PPSQPPNQPPNQQPNNTSASLPSPLYPWMR---SQFERKRGRQTYTRYQTLELEKEFHFN 260
P + QP QP N + YPWM + R+RGRQTYTRYQTLELEKEFH N
Sbjct: 127 PGAAASAQPVQHQPTNHT------FYPWMAIAGANGLRRRGRQTYTRYQTLELEKEFHTN 180
Query: 261 RYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
YLTRRRRIE+AHALCLTERQIKIWFQNRRMK KKE
Sbjct: 181 HYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKKE 216
>gi|1196549|gb|AAA88245.1| homeobox protein, partial [Mus musculus]
Length = 83
Score = 125 bits (313), Expect = 3e-26, Method: Composition-based stats.
Identities = 60/68 (88%), Positives = 64/68 (94%)
Query: 237 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
+RKRGRQTYTRYQTLELEKEFH+NRYLTRRRRIEIAH LCLTERQIKIWFQNRRMKWKKE
Sbjct: 2 DRKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHTLCLTERQIKIWFQNRRMKWKKE 61
Query: 297 NKSKDGGS 304
NK+ G+
Sbjct: 62 NKTSGPGT 69
>gi|348581049|ref|XP_003476290.1| PREDICTED: homeobox protein Hox-C5-like [Cavia porcellus]
Length = 222
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 57/79 (72%), Positives = 64/79 (81%), Gaps = 5/79 (6%)
Query: 228 LYPWMRS-----QFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQI 282
+YPWM + + KR R +YTRYQTLELEKEFHFNRYLTRRRRIEIA+ LCL ERQI
Sbjct: 140 IYPWMTKLHMSHETDGKRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQI 199
Query: 283 KIWFQNRRMKWKKENKSKD 301
KIWFQNRRMKWKK++K K
Sbjct: 200 KIWFQNRRMKWKKDSKMKS 218
>gi|547655|sp|Q01622.1|HLOX2_HELRO RecName: Full=Homeobox protein LOX2
gi|9444|emb|CAA78665.1| lox2 [Helobdella robusta]
Length = 429
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 65/112 (58%), Positives = 75/112 (66%), Gaps = 7/112 (6%)
Query: 192 VVVNHQQTPPNQPPSQPP---NQPPNQQPNNTSASLPSPLYPWMR----SQFERKRGRQT 244
V+ N + P+ P S P N P+ +P YPWM + +R+RGRQT
Sbjct: 164 VISNRTGSRPSSPASTTPSCENFSPHSPSMKGGKMGSAPSYPWMSIVGPNSNQRRRGRQT 223
Query: 245 YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
YTRYQTLELEKEF FNRYLTRRRRIE++H L LTERQIKIWFQNRRMK KKE
Sbjct: 224 YTRYQTLELEKEFKFNRYLTRRRRIELSHTLYLTERQIKIWFQNRRMKEKKE 275
>gi|396779|emb|CAA52159.1| sex combs reduced homeodomain protein homologue [Schistocerca
gregaria]
Length = 106
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 61/75 (81%), Positives = 63/75 (84%), Gaps = 4/75 (5%)
Query: 237 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
E KR R +YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE
Sbjct: 7 ETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 66
Query: 297 NK----SKDGGSDAG 307
+K S G AG
Sbjct: 67 HKMASMSAGGNYYAG 81
>gi|47115878|sp|Q8T940.1|UBX_JUNCO RecName: Full=Homeotic protein ultrabithorax; AltName: Full=JcUbx
gi|18535620|gb|AAL71873.1| ultrabithorax [Junonia coenia]
Length = 253
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 64/96 (66%), Positives = 69/96 (71%), Gaps = 9/96 (9%)
Query: 204 PPSQPPNQPPNQQPNNTSASLPSPLYPWMR---SQFERKRGRQTYTRYQTLELEKEFHFN 260
P + QP QP N + YPWM + R+RGRQTYTRYQTLELEKEFH N
Sbjct: 128 PGAAASAQPVQHQPTNHT------FYPWMAIAGANGLRRRGRQTYTRYQTLELEKEFHTN 181
Query: 261 RYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
YLTRRRRIE+AHALCLTERQIKIWFQNRRMK KKE
Sbjct: 182 HYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKKE 217
>gi|426372800|ref|XP_004053304.1| PREDICTED: homeobox protein Hox-C5 [Gorilla gorilla gorilla]
Length = 222
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 57/79 (72%), Positives = 64/79 (81%), Gaps = 5/79 (6%)
Query: 228 LYPWMRS-----QFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQI 282
+YPWM + + KR R +YTRYQTLELEKEFHFNRYLTRRRRIEIA+ LCL ERQI
Sbjct: 140 IYPWMTKLHMSHETDGKRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQI 199
Query: 283 KIWFQNRRMKWKKENKSKD 301
KIWFQNRRMKWKK++K K
Sbjct: 200 KIWFQNRRMKWKKDSKMKS 218
>gi|354490175|ref|XP_003507235.1| PREDICTED: homeobox protein Hox-C5-like [Cricetulus griseus]
gi|344239244|gb|EGV95347.1| Homeobox protein Hox-C5 [Cricetulus griseus]
Length = 222
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 57/79 (72%), Positives = 64/79 (81%), Gaps = 5/79 (6%)
Query: 228 LYPWMRS-----QFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQI 282
+YPWM + + KR R +YTRYQTLELEKEFHFNRYLTRRRRIEIA+ LCL ERQI
Sbjct: 140 IYPWMTKLHMSHETDGKRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQI 199
Query: 283 KIWFQNRRMKWKKENKSKD 301
KIWFQNRRMKWKK++K K
Sbjct: 200 KIWFQNRRMKWKKDSKMKS 218
>gi|146324933|sp|A2D4P8.1|HXD4_ATEGE RecName: Full=Homeobox protein Hox-D4
gi|146324935|sp|A2D5I1.1|HXD4_LAGLA RecName: Full=Homeobox protein Hox-D4
gi|122053832|gb|ABM65895.1| HOXD4 [Ateles geoffroyi]
gi|122934866|gb|ABM68173.1| HOXD4 [Lagothrix lagotricha]
Length = 255
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 61/97 (62%), Positives = 69/97 (71%), Gaps = 11/97 (11%)
Query: 213 PNQQPNNTSASLPSPLYPWMR-----------SQFERKRGRQTYTRYQTLELEKEFHFNR 261
P Q P T+ P+ +YPWM+ + E KR R YTR Q LELEKEFHFNR
Sbjct: 118 PKQPPPGTALKQPAVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNR 177
Query: 262 YLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
YLTRRRRIEIAH LCL+ERQIKIWFQNRRMKWKK++K
Sbjct: 178 YLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 214
>gi|11321638|ref|NP_061826.1| homeobox protein Hox-C5 [Homo sapiens]
gi|397521949|ref|XP_003831045.1| PREDICTED: homeobox protein Hox-C5 [Pan paniscus]
gi|232262|sp|Q00444.1|HXC5_HUMAN RecName: Full=Homeobox protein Hox-C5; AltName: Full=Homeobox
protein CP11; AltName: Full=Homeobox protein Hox-3D
gi|32388|emb|CAA43894.1| homeoprotein HOX3D [Homo sapiens]
gi|119617154|gb|EAW96748.1| homeobox C5 [Homo sapiens]
gi|146327466|gb|AAI41644.1| Homeobox C5 [synthetic construct]
gi|147897703|gb|AAI40273.1| Homeobox C5 [synthetic construct]
gi|208966502|dbj|BAG73265.1| homeobox C5 [synthetic construct]
gi|410256620|gb|JAA16277.1| homeobox C5 [Pan troglodytes]
Length = 222
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 57/79 (72%), Positives = 64/79 (81%), Gaps = 5/79 (6%)
Query: 228 LYPWMRS-----QFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQI 282
+YPWM + + KR R +YTRYQTLELEKEFHFNRYLTRRRRIEIA+ LCL ERQI
Sbjct: 140 IYPWMTKLHMSHETDGKRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQI 199
Query: 283 KIWFQNRRMKWKKENKSKD 301
KIWFQNRRMKWKK++K K
Sbjct: 200 KIWFQNRRMKWKKDSKMKS 218
>gi|151935659|gb|ABS18811.1| Hox4 [Flaccisagitta enflata]
Length = 288
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 59/82 (71%), Positives = 65/82 (79%), Gaps = 11/82 (13%)
Query: 228 LYPWMR---------SQF--ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALC 276
+YPWM+ + F E KR R YTR+Q LELEKEFHFNRYLTRRRRIEIAHALC
Sbjct: 109 IYPWMKKVHVATSNGTNFAGEPKRARTAYTRHQVLELEKEFHFNRYLTRRRRIEIAHALC 168
Query: 277 LTERQIKIWFQNRRMKWKKENK 298
LTERQIKIWFQNRRMKWKK++K
Sbjct: 169 LTERQIKIWFQNRRMKWKKDHK 190
>gi|327283057|ref|XP_003226258.1| PREDICTED: homeobox protein Hox-D4-like [Anolis carolinensis]
Length = 244
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/136 (52%), Positives = 85/136 (62%), Gaps = 19/136 (13%)
Query: 197 QQTPPNQPPSQPPNQPPNQQP------NNTSASL--PSPLYPWMR-----------SQFE 237
Q+ P Q P P +P QQP N + A+L P+ +YPWM+ + E
Sbjct: 92 QEQPRPQGPFPEPPRPCGQQPGLKNPANGSPAALKQPAVVYPWMKKVHVNSVNPNYTGGE 151
Query: 238 RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 297
KR R YTR Q LELEKEFHFNRYLTRRRRIEIAH LCL+ERQIKIWFQNRRMKWKK++
Sbjct: 152 PKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDH 211
Query: 298 KSKDGGSDAGSDITPA 313
K + + S PA
Sbjct: 212 KLPNTKGRSSSSSAPA 227
>gi|121503196|gb|ABM55151.1| HOXA5 [Macaca mulatta]
gi|124013564|gb|ABM88032.1| HOXA5 [Macaca nemestrina]
gi|124054173|gb|ABM89278.1| HOXA5 [Pongo pygmaeus]
Length = 82
Score = 125 bits (313), Expect = 4e-26, Method: Composition-based stats.
Identities = 57/64 (89%), Positives = 59/64 (92%)
Query: 237 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
E KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+ERQIKIWFQNRRMKWKK+
Sbjct: 6 EGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 65
Query: 297 NKSK 300
NK K
Sbjct: 66 NKLK 69
>gi|20339641|gb|AAM19474.1|AF410916_1 HoxN6 homeobox [Petromyzon marinus]
gi|20339643|gb|AAM19475.1|AF410917_1 HoxN7 homeobox [Petromyzon marinus]
Length = 60
Score = 124 bits (312), Expect = 4e-26, Method: Composition-based stats.
Identities = 57/60 (95%), Positives = 60/60 (100%)
Query: 238 RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 297
R+RGRQTY+RYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE+
Sbjct: 1 RRRGRQTYSRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEH 60
>gi|10714|emb|CAA31546.1| homeo domain protein [Tripneustes gratilla]
Length = 127
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 57/72 (79%), Positives = 63/72 (87%)
Query: 238 RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 297
RKR RQTYTRYQTLELEKEFHFNRYLTRRRRIE++H L LTERQIKIWFQNRRMK+KKE+
Sbjct: 9 RKRCRQTYTRYQTLELEKEFHFNRYLTRRRRIELSHLLGLTERQIKIWFQNRRMKYKKES 68
Query: 298 KSKDGGSDAGSD 309
K+K+ G D
Sbjct: 69 KNKEEGVSGEGD 80
>gi|354472315|ref|XP_003498385.1| PREDICTED: homeobox protein Hox-D8-like, partial [Cricetulus
griseus]
Length = 152
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 57/78 (73%), Positives = 67/78 (85%), Gaps = 2/78 (2%)
Query: 222 ASLPSPLYPWMRSQFE--RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
+S PS ++PWMR Q R+RGRQTY+R+QTLELEKEF FN YLTR+RRIE++H L LTE
Sbjct: 41 SSSPSQMFPWMRPQAAPGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHTLALTE 100
Query: 280 RQIKIWFQNRRMKWKKEN 297
RQ+KIWFQNRRMKWKKEN
Sbjct: 101 RQVKIWFQNRRMKWKKEN 118
>gi|1791005|gb|AAB41222.1| homeodomain-containing transcription factor [Mus musculus]
gi|148695229|gb|EDL27176.1| homeobox D4, isoform CRA_a [Mus musculus]
gi|148695230|gb|EDL27177.1| homeobox D4, isoform CRA_a [Mus musculus]
gi|223460739|gb|AAI39208.1| Hoxd4 protein [Mus musculus]
gi|223461092|gb|AAI39207.1| Hoxd4 protein [Mus musculus]
Length = 250
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 61/97 (62%), Positives = 69/97 (71%), Gaps = 11/97 (11%)
Query: 213 PNQQPNNTSASLPSPLYPWMR-----------SQFERKRGRQTYTRYQTLELEKEFHFNR 261
P Q P T+ P+ +YPWM+ + E KR R YTR Q LELEKEFHFNR
Sbjct: 116 PKQPPPGTALKQPAVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNR 175
Query: 262 YLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
YLTRRRRIEIAH LCL+ERQIKIWFQNRRMKWKK++K
Sbjct: 176 YLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 212
>gi|395540855|ref|XP_003772366.1| PREDICTED: homeobox protein Hox-C5 [Sarcophilus harrisii]
Length = 222
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 57/79 (72%), Positives = 64/79 (81%), Gaps = 5/79 (6%)
Query: 228 LYPWMRS-----QFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQI 282
+YPWM + + KR R +YTRYQTLELEKEFHFNRYLTRRRRIEIA+ LCL ERQI
Sbjct: 140 IYPWMTKLHMSHETDGKRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQI 199
Query: 283 KIWFQNRRMKWKKENKSKD 301
KIWFQNRRMKWKK++K K
Sbjct: 200 KIWFQNRRMKWKKDSKLKS 218
>gi|158290042|ref|XP_311627.4| AGAP004662-PA [Anopheles gambiae str. PEST]
gi|74764409|sp|O76762.1|ABDA_ANOGA RecName: Full=Homeobox protein abdominal-A homolog
gi|3420838|gb|AAC31946.1| abdominal-A homeotic protein [Anopheles gambiae]
gi|157018341|gb|EAA07261.6| AGAP004662-PA [Anopheles gambiae str. PEST]
Length = 308
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 55/62 (88%), Positives = 59/62 (95%)
Query: 238 RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 297
R+RGRQTYTR+QTLELEKEFHFN YLTRRRRIEIAHALCLTERQIKIWFQNRRMK KKE
Sbjct: 138 RRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKEL 197
Query: 298 KS 299
++
Sbjct: 198 RA 199
>gi|158508520|ref|NP_034599.2| homeobox protein Hox-D4 [Mus musculus]
gi|114152826|sp|P10628.3|HXD4_MOUSE RecName: Full=Homeobox protein Hox-D4; AltName: Full=Homeobox
protein Hox-4.2; AltName: Full=Homeobox protein Hox-5.1
gi|74183224|dbj|BAE22547.1| unnamed protein product [Mus musculus]
Length = 250
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 61/97 (62%), Positives = 69/97 (71%), Gaps = 11/97 (11%)
Query: 213 PNQQPNNTSASLPSPLYPWMR-----------SQFERKRGRQTYTRYQTLELEKEFHFNR 261
P Q P T+ P+ +YPWM+ + E KR R YTR Q LELEKEFHFNR
Sbjct: 116 PKQPPPGTALKQPAVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNR 175
Query: 262 YLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
YLTRRRRIEIAH LCL+ERQIKIWFQNRRMKWKK++K
Sbjct: 176 YLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 212
>gi|123246|sp|P14838.1|HXB5_CHICK RecName: Full=Homeobox protein Hox-B5; AltName: Full=Homeobox
protein Hox-2.1; Short=Ghox-2.1
gi|1334633|emb|CAA34743.1| unnamed protein product [Gallus gallus]
Length = 82
Score = 124 bits (312), Expect = 4e-26, Method: Composition-based stats.
Identities = 60/75 (80%), Positives = 63/75 (84%), Gaps = 1/75 (1%)
Query: 239 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+ERQIKIWFQNRRMKWKK+NK
Sbjct: 8 KRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNK 67
Query: 299 SKDGG-SDAGSDITP 312
K + AGS P
Sbjct: 68 LKSMSLASAGSAFQP 82
>gi|86515424|ref|NP_001034539.1| fushi tarazu [Tribolium castaneum]
gi|13241680|gb|AAK16421.1|AF321227_1 Ftz [Tribolium castaneum]
Length = 290
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 70/122 (57%), Positives = 77/122 (63%), Gaps = 14/122 (11%)
Query: 203 QPPSQPPNQPPNQQP---NNTSASL------PSPLYPWMR-----SQFERKRGRQTYTRY 248
Q PPNQ N Q NN SA P+ YPWM+ S KR RQTYTRY
Sbjct: 134 QAKKTPPNQYENFQQYDNNNFSAEENSVSEPPANFYPWMKAHGDSSATGNKRTRQTYTRY 193
Query: 249 QTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSKDGGSDAGS 308
QTLELEKEFHFN+YLTRRRRIEIA +L LTERQIKIWFQNRRMK KK+ K + +
Sbjct: 194 QTLELEKEFHFNKYLTRRRRIEIAESLRLTERQIKIWFQNRRMKAKKDTKFTEQSVTSTF 253
Query: 309 DI 310
D
Sbjct: 254 DF 255
>gi|347972379|ref|XP_003436887.1| AGAP004662-PC [Anopheles gambiae str. PEST]
gi|333467597|gb|EGK96615.1| AGAP004662-PC [Anopheles gambiae str. PEST]
Length = 307
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 55/62 (88%), Positives = 59/62 (95%)
Query: 238 RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 297
R+RGRQTYTR+QTLELEKEFHFN YLTRRRRIEIAHALCLTERQIKIWFQNRRMK KKE
Sbjct: 137 RRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKEL 196
Query: 298 KS 299
++
Sbjct: 197 RA 198
>gi|259053107|emb|CAX11340.1| ultrabithorax [Parasteatoda tepidariorum]
Length = 265
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 58/72 (80%), Positives = 61/72 (84%), Gaps = 3/72 (4%)
Query: 228 LYPWMRSQF---ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKI 284
YPWM Q R+RGRQTYTRYQTLELEKEFH N YLTRRRRIE+AH+LCLTERQIKI
Sbjct: 139 FYPWMAVQGPNGMRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHSLCLTERQIKI 198
Query: 285 WFQNRRMKWKKE 296
WFQNRRMK KKE
Sbjct: 199 WFQNRRMKLKKE 210
>gi|392301351|gb|AFM55061.1| ultrabithorax, partial [Microvelia sp. AK-2011a]
Length = 245
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/118 (58%), Positives = 80/118 (67%), Gaps = 14/118 (11%)
Query: 182 AQQPPPQHHQVVVNHQQTPPNQPPSQPPNQPPNQQPNNTSASLPSPLYPWMR---SQFER 238
A P P +Q + TP + P+ P+ P +QQ + + YPWM + R
Sbjct: 136 ASTPAPGWNQCSI----TPTSGQPAVAPS-PLHQQASQHT------FYPWMAIAGANGLR 184
Query: 239 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
+RGRQTYTRYQTLELEKEFH N YLTRRRRIE+AHALCLTERQIKIWFQNRRMK KKE
Sbjct: 185 RRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKKE 242
>gi|1039391|gb|AAA79876.1| homeobox protein [Mus musculus]
Length = 222
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 57/79 (72%), Positives = 64/79 (81%), Gaps = 5/79 (6%)
Query: 228 LYPWMRS-----QFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQI 282
+YPWM + + KR R +YTRYQTLELEKEFHFNRYLTRRRRIEIA+ LCL ERQI
Sbjct: 140 IYPWMTKLHMSHETDGKRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQI 199
Query: 283 KIWFQNRRMKWKKENKSKD 301
KIWFQNRRMKWKK++K K
Sbjct: 200 KIWFQNRRMKWKKDSKMKS 218
>gi|395837223|ref|XP_003791540.1| PREDICTED: homeobox protein Hox-D4 [Otolemur garnettii]
Length = 260
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 61/97 (62%), Positives = 69/97 (71%), Gaps = 11/97 (11%)
Query: 213 PNQQPNNTSASLPSPLYPWMR-----------SQFERKRGRQTYTRYQTLELEKEFHFNR 261
P Q P T+ P+ +YPWM+ + E KR R YTR Q LELEKEFHFNR
Sbjct: 119 PKQPPPGTALKQPAVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNR 178
Query: 262 YLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
YLTRRRRIEIAH LCL+ERQIKIWFQNRRMKWKK++K
Sbjct: 179 YLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 215
>gi|444713456|gb|ELW54355.1| Homeobox protein Hox-A6 [Tupaia chinensis]
Length = 265
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/131 (52%), Positives = 75/131 (57%), Gaps = 41/131 (31%)
Query: 220 TSASLPSPLYPWMRSQF-----ERKRGRQTYTRYQTLELEKEFHFNRY------------ 262
T SP+YPWM+ +RKRGRQTYTRYQTLELEKEFHFNRY
Sbjct: 128 TDRKYTSPVYPWMQRMNSCAGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIANA 187
Query: 263 ------------------------LTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
LTRRRRIEIA+ALCLTERQIKIWFQNRRMKWKKENK
Sbjct: 188 LCLTERQITIWTLELEKEFHFNRSLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKENK 247
Query: 299 SKDGGSDAGSD 309
+ +G D
Sbjct: 248 LINSTQPSGED 258
>gi|306965452|emb|CBK55567.1| ultrabithorax [Glomeris marginata]
Length = 335
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 58/72 (80%), Positives = 61/72 (84%), Gaps = 3/72 (4%)
Query: 228 LYPWMR---SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKI 284
YPWM + R+RGRQTYTRYQTLELEKEFH N YLTRRRRIE+AHALCLTERQIKI
Sbjct: 230 FYPWMAIAGANGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKI 289
Query: 285 WFQNRRMKWKKE 296
WFQNRRMK KKE
Sbjct: 290 WFQNRRMKLKKE 301
>gi|222876510|gb|ACM69152.1| Hox5 protein [Symsagittifera roscoffensis]
gi|305379185|gb|ADM48791.1| homeobox transcription factor 5 [Symsagittifera roscoffensis]
Length = 361
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 55/78 (70%), Positives = 62/78 (79%), Gaps = 2/78 (2%)
Query: 226 SPLYPWMRSQ--FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIK 283
S ++ WM + + KR R YTR+QTLELEKEFHFNRYLTRRRRIEIA+ L LTERQIK
Sbjct: 274 SKVFAWMSKRPPTDCKRTRTAYTRFQTLELEKEFHFNRYLTRRRRIEIANLLALTERQIK 333
Query: 284 IWFQNRRMKWKKENKSKD 301
IWFQNRRMKWKK+N K
Sbjct: 334 IWFQNRRMKWKKDNNLKS 351
>gi|255742475|gb|ACU32587.1| homeobox protein HoxD8 [Callorhinchus milii]
Length = 239
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 57/77 (74%), Positives = 67/77 (87%), Gaps = 2/77 (2%)
Query: 223 SLPSPLYPWMRSQFE--RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTER 280
S P+ ++PWMR Q R+RGRQTY+R+QTLELEKEF FN YLTR+RRIE++HAL LTER
Sbjct: 130 SSPTQMFPWMRPQAAPGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALGLTER 189
Query: 281 QIKIWFQNRRMKWKKEN 297
Q+KIWFQNRRMKWKKEN
Sbjct: 190 QVKIWFQNRRMKWKKEN 206
>gi|541626|gb|AAC46491.1| fushi-tarazu [Tribolium castaneum]
gi|1093401|prf||2103337A fushi tarazu gene
Length = 322
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 70/122 (57%), Positives = 77/122 (63%), Gaps = 14/122 (11%)
Query: 203 QPPSQPPNQPPNQQP---NNTSASL------PSPLYPWMR-----SQFERKRGRQTYTRY 248
Q PPNQ N Q NN SA P+ YPWM+ S KR RQTYTRY
Sbjct: 134 QAKKTPPNQYENFQQYDNNNFSAEENSVSEPPANFYPWMKAHGDSSATGNKRTRQTYTRY 193
Query: 249 QTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSKDGGSDAGS 308
QTLELEKEFHFN+YLTRRRRIEIA +L LTERQIKIWFQNRRMK KK+ K + +
Sbjct: 194 QTLELEKEFHFNKYLTRRRRIEIAESLRLTERQIKIWFQNRRMKAKKDTKFTEQSVTSTF 253
Query: 309 DI 310
D
Sbjct: 254 DF 255
>gi|359754107|gb|AEV59528.1| HOXC5 [Macropus eugenii]
Length = 222
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 57/79 (72%), Positives = 64/79 (81%), Gaps = 5/79 (6%)
Query: 228 LYPWMRS-----QFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQI 282
+YPWM + + KR R +YTRYQTLELEKEFHFNRYLTRRRRIEIA+ LCL ERQI
Sbjct: 140 IYPWMTKLHMSHETDGKRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQI 199
Query: 283 KIWFQNRRMKWKKENKSKD 301
KIWFQNRRMKWKK++K K
Sbjct: 200 KIWFQNRRMKWKKDSKLKS 218
>gi|109944946|dbj|BAE97002.1| Ultrabithorax [Porcellio scaber]
Length = 248
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 62/84 (73%), Positives = 67/84 (79%), Gaps = 9/84 (10%)
Query: 216 QPNNTSASLPSPLYPWMR---SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIA 272
QP+NT+ YPWM + R+RGRQTYTRYQTLELEKEFH N YLTRRRRIE+A
Sbjct: 113 QPSNTT------FYPWMAIAGANGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMA 166
Query: 273 HALCLTERQIKIWFQNRRMKWKKE 296
HALCLTERQIKIWFQNRRMK KKE
Sbjct: 167 HALCLTERQIKIWFQNRRMKLKKE 190
>gi|10119974|gb|AAG13009.1| cephalothorax [Tribolium castaneum]
Length = 100
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 57/62 (91%), Positives = 59/62 (95%)
Query: 237 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
E KR R +YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE
Sbjct: 7 ETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 66
Query: 297 NK 298
+K
Sbjct: 67 HK 68
>gi|86515384|ref|NP_001034518.1| homeobox protein abdominal-A homolog [Tribolium castaneum]
gi|6016229|sp|Q07961.2|ABDA_TRICA RecName: Full=Homeobox protein abdominal-A homolog
gi|2394295|gb|AAB70262.1| abdominal-AII [Tribolium castaneum]
gi|270002801|gb|EEZ99248.1| abdominal-A [Tribolium castaneum]
Length = 343
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 62/88 (70%), Positives = 67/88 (76%), Gaps = 15/88 (17%)
Query: 227 PLYPWMR-----SQFER----------KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEI 271
P YPWM S F+R +RGRQTYTR+QTLELEKEFHFN YLTRRRRIEI
Sbjct: 190 PRYPWMSITDWMSPFDRVVCGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEI 249
Query: 272 AHALCLTERQIKIWFQNRRMKWKKENKS 299
AHALCLTERQIKIWFQNRRMK KKE ++
Sbjct: 250 AHALCLTERQIKIWFQNRRMKLKKELRA 277
>gi|255742444|gb|ACU32558.1| homeobox protein HoxB4 [Callorhinchus milii]
Length = 243
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 63/105 (60%), Positives = 70/105 (66%), Gaps = 11/105 (10%)
Query: 205 PSQPPNQPPNQQPNNTSASLPSPLYPWMRSQF-----------ERKRGRQTYTRYQTLEL 253
PS PP+ NTS S +YPWM+ E KR R YTR Q LEL
Sbjct: 102 PSPPPSCSQVTSNQNTSCSKEPVVYPWMKKVHINIVNPNCKGGEMKRSRTAYTRQQVLEL 161
Query: 254 EKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
EKEFHFNRYLTRRRR+EIAH LCL+ERQIKIWFQNRRMKWKK++K
Sbjct: 162 EKEFHFNRYLTRRRRVEIAHNLCLSERQIKIWFQNRRMKWKKDHK 206
>gi|15450325|gb|AAK96032.1| homeodomain transcription factor Fushi tarazu [Tribolium castaneum]
gi|270002804|gb|EEZ99251.1| fushi tarazu [Tribolium castaneum]
Length = 290
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 70/122 (57%), Positives = 77/122 (63%), Gaps = 14/122 (11%)
Query: 203 QPPSQPPNQPPNQQP---NNTSASL------PSPLYPWMR-----SQFERKRGRQTYTRY 248
Q PPNQ N Q NN SA P+ YPWM+ S KR RQTYTRY
Sbjct: 134 QAKKTPPNQYENFQQYDNNNFSAEENSVSEPPANFYPWMKAHGDSSATGNKRTRQTYTRY 193
Query: 249 QTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSKDGGSDAGS 308
QTLELEKEFHFN+YLTRRRRIEIA +L LTERQIKIWFQNRRMK KK+ K + +
Sbjct: 194 QTLELEKEFHFNKYLTRRRRIEIAESLRLTERQIKIWFQNRRMKAKKDTKFTEQSVTSTF 253
Query: 309 DI 310
D
Sbjct: 254 DF 255
>gi|387205|gb|AAA37854.1| homeobox-6.1 protein, partial [Mus musculus]
gi|930199|emb|CAA34737.1| Hox 6.1 protein (106 AA) [Mus musculus]
Length = 105
Score = 124 bits (312), Expect = 5e-26, Method: Composition-based stats.
Identities = 54/61 (88%), Positives = 59/61 (96%)
Query: 237 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
+R+RGRQ Y+RYQTLELEKEFHFNRYLTRRRRIEIA+ALCLTERQIKIWFQN RMKWKKE
Sbjct: 10 DRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNARMKWKKE 69
Query: 297 N 297
+
Sbjct: 70 S 70
>gi|62958676|gb|AAV97681.2| Hox protein [Oreochromis niloticus]
Length = 70
Score = 124 bits (312), Expect = 5e-26, Method: Composition-based stats.
Identities = 55/67 (82%), Positives = 60/67 (89%)
Query: 234 SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKW 293
S+ E KR R +YTRYQTLELEKEFHFNRYL+RRRRIEIAH LCL ERQIKIWFQNRRMKW
Sbjct: 1 SESEGKRSRTSYTRYQTLELEKEFHFNRYLSRRRRIEIAHTLCLNERQIKIWFQNRRMKW 60
Query: 294 KKENKSK 300
KK++K K
Sbjct: 61 KKDSKIK 67
>gi|426337801|ref|XP_004032885.1| PREDICTED: homeobox protein Hox-D4 [Gorilla gorilla gorilla]
gi|146324934|sp|A1YER7.1|HXD4_GORGO RecName: Full=Homeobox protein Hox-D4
gi|120974087|gb|ABM46635.1| HOXD4 [Gorilla gorilla]
Length = 255
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 61/97 (62%), Positives = 69/97 (71%), Gaps = 11/97 (11%)
Query: 213 PNQQPNNTSASLPSPLYPWMR-----------SQFERKRGRQTYTRYQTLELEKEFHFNR 261
P Q P T+ P+ +YPWM+ + E KR R YTR Q LELEKEFHFNR
Sbjct: 118 PKQPPPGTALKQPAVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNR 177
Query: 262 YLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
YLTRRRRIEIAH LCL+ERQIKIWFQNRRMKWKK++K
Sbjct: 178 YLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 214
>gi|299473905|gb|ADJ18235.1| Lox5 protein [Gibbula varia]
Length = 200
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 60/71 (84%), Positives = 63/71 (88%), Gaps = 1/71 (1%)
Query: 236 FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKK 295
FE+KR RQTYTRYQTLELEKEFHFNRYLTRRRRIE+AH L LTERQIKIWFQNRRMKWKK
Sbjct: 12 FEQKRTRQTYTRYQTLELEKEFHFNRYLTRRRRIEVAHMLGLTERQIKIWFQNRRMKWKK 71
Query: 296 ENK-SKDGGSD 305
+N SK G D
Sbjct: 72 DNNVSKVTGPD 82
>gi|121484044|gb|ABM54347.1| HOXB5 [Pan paniscus]
Length = 74
Score = 124 bits (312), Expect = 5e-26, Method: Composition-based stats.
Identities = 55/62 (88%), Positives = 57/62 (91%)
Query: 239 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+ RQIKIWFQNRRMKWKK+NK
Sbjct: 7 KRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSXRQIKIWFQNRRMKWKKDNK 66
Query: 299 SK 300
K
Sbjct: 67 LK 68
>gi|146324938|sp|A1YFD8.1|HXD4_SAGLB RecName: Full=Homeobox protein Hox-D4
gi|121221996|gb|ABM47600.1| HOXD4 [Saguinus labiatus]
Length = 255
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 61/97 (62%), Positives = 69/97 (71%), Gaps = 11/97 (11%)
Query: 213 PNQQPNNTSASLPSPLYPWMR-----------SQFERKRGRQTYTRYQTLELEKEFHFNR 261
P Q P T+ P+ +YPWM+ + E KR R YTR Q LELEKEFHFNR
Sbjct: 118 PKQPPPGTALKQPAVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNR 177
Query: 262 YLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
YLTRRRRIEIAH LCL+ERQIKIWFQNRRMKWKK++K
Sbjct: 178 YLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 214
>gi|296652|emb|CAA35237.1| hox 5.1 protein [Homo sapiens]
gi|189067017|dbj|BAG36610.1| unnamed protein product [Homo sapiens]
gi|208968521|dbj|BAG74099.1| homeobox D4 [synthetic construct]
Length = 255
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 61/97 (62%), Positives = 69/97 (71%), Gaps = 11/97 (11%)
Query: 213 PNQQPNNTSASLPSPLYPWMR-----------SQFERKRGRQTYTRYQTLELEKEFHFNR 261
P Q P T+ P+ +YPWM+ + E KR R YTR Q LELEKEFHFNR
Sbjct: 118 PKQPPPGTALKQPAVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNR 177
Query: 262 YLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
YLTRRRRIEIAH LCL+ERQIKIWFQNRRMKWKK++K
Sbjct: 178 YLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 214
>gi|193952|gb|AAA20072.1| homeobox protein [Mus musculus]
Length = 248
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 61/97 (62%), Positives = 69/97 (71%), Gaps = 11/97 (11%)
Query: 213 PNQQPNNTSASLPSPLYPWMR-----------SQFERKRGRQTYTRYQTLELEKEFHFNR 261
P Q P T+ P+ +YPWM+ + E KR R YTR Q LELEKEFHFNR
Sbjct: 114 PKQPPPGTALKQPAVVYPWMKKVHVNSANPNYTGGEPKRSRTAYTRQQVLELEKEFHFNR 173
Query: 262 YLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
YLTRRRRIEIAH LCL+ERQIKIWFQNRRMKWKK++K
Sbjct: 174 YLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 210
>gi|62528|emb|CAA30293.1| unnamed protein product [Danio rerio]
gi|387231419|gb|AFJ72420.1| homeobox B5, partial [Miniopterus schreibersii]
gi|387231423|gb|AFJ72422.1| homeobox B5, partial [Rhinolophus macrotis]
gi|387231425|gb|AFJ72423.1| homeobox B5, partial [Hipposideros armiger]
gi|387231433|gb|AFJ72427.1| homeobox B5, partial [Taphozous melanopogon]
gi|387231435|gb|AFJ72428.1| homeobox B5, partial [Rhinolophus marshalli]
gi|387231437|gb|AFJ72429.1| homeobox B5, partial [Cynopterus sphinx]
gi|387231439|gb|AFJ72430.1| homeobox B5, partial [Chaerephon plicatus]
gi|387231443|gb|AFJ72432.1| homeobox B5, partial [Rhinolophus pusillus]
gi|387231447|gb|AFJ72434.1| homeobox B5, partial [Rousettus leschenaultii]
gi|225987|prf||1405249A homeo box containing gene Zf21
Length = 81
Score = 124 bits (311), Expect = 5e-26, Method: Composition-based stats.
Identities = 60/75 (80%), Positives = 63/75 (84%), Gaps = 1/75 (1%)
Query: 239 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+ERQIKIWFQNRRMKWKK+NK
Sbjct: 7 KRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNK 66
Query: 299 SKDGG-SDAGSDITP 312
K + AGS P
Sbjct: 67 LKSMSLATAGSAFQP 81
>gi|123204478|gb|ABM73564.1| homeodomain protein [Megalobrama amblycephala]
Length = 212
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 60/84 (71%), Positives = 70/84 (83%), Gaps = 2/84 (2%)
Query: 216 QPNNTSAS-LPSPLYPWMRSQFE-RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAH 273
+ +NT S P+ L+PWMR Q R+RGRQTY+RYQTLELEKEF FN YLTR+RRIE++H
Sbjct: 121 ETDNTEQSPSPTQLFPWMRPQAAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSH 180
Query: 274 ALCLTERQIKIWFQNRRMKWKKEN 297
AL LTERQ+KIWFQNRRMKWKK N
Sbjct: 181 ALGLTERQVKIWFQNRRMKWKKVN 204
>gi|403183386|gb|EAT33900.2| AAEL013832-PA [Aedes aegypti]
Length = 418
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 55/62 (88%), Positives = 59/62 (95%)
Query: 238 RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 297
R+RGRQTYTR+QTLELEKEFHFN YLTRRRRIEIAHALCLTERQIKIWFQNRRMK KKE
Sbjct: 200 RRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKEL 259
Query: 298 KS 299
++
Sbjct: 260 RA 261
>gi|125858467|ref|NP_001075038.1| homeobox protein Hox-D4 [Pan troglodytes]
gi|397489129|ref|XP_003815587.1| PREDICTED: homeobox protein Hox-D4 [Pan paniscus]
gi|146324936|sp|A1YFY3.1|HXD4_PANPA RecName: Full=Homeobox protein Hox-D4
gi|146324937|sp|A2T6X6.1|HXD4_PANTR RecName: Full=Homeobox protein Hox-D4
gi|121483828|gb|ABM54208.1| HOXD4 [Pan paniscus]
gi|124111109|gb|ABM91931.1| HOXD4 [Pan troglodytes]
gi|410218854|gb|JAA06646.1| homeobox D4 [Pan troglodytes]
Length = 255
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 61/97 (62%), Positives = 69/97 (71%), Gaps = 11/97 (11%)
Query: 213 PNQQPNNTSASLPSPLYPWMR-----------SQFERKRGRQTYTRYQTLELEKEFHFNR 261
P Q P T+ P+ +YPWM+ + E KR R YTR Q LELEKEFHFNR
Sbjct: 118 PKQPPPGTALKQPAVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNR 177
Query: 262 YLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
YLTRRRRIEIAH LCL+ERQIKIWFQNRRMKWKK++K
Sbjct: 178 YLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 214
>gi|332209405|ref|XP_003253802.1| PREDICTED: homeobox protein Hox-D4 [Nomascus leucogenys]
Length = 255
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 61/97 (62%), Positives = 69/97 (71%), Gaps = 11/97 (11%)
Query: 213 PNQQPNNTSASLPSPLYPWMR-----------SQFERKRGRQTYTRYQTLELEKEFHFNR 261
P Q P T+ P+ +YPWM+ + E KR R YTR Q LELEKEFHFNR
Sbjct: 118 PKQPPPGTALKQPAVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNR 177
Query: 262 YLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
YLTRRRRIEIAH LCL+ERQIKIWFQNRRMKWKK++K
Sbjct: 178 YLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 214
>gi|14916585|sp|Q9IA12.1|HXD8_HETFR RecName: Full=Homeobox protein Hox-D8
gi|7271820|gb|AAF44632.1|AF224263_2 HoxD8 [Heterodontus francisci]
Length = 240
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 57/77 (74%), Positives = 67/77 (87%), Gaps = 2/77 (2%)
Query: 223 SLPSPLYPWMRSQFE--RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTER 280
S P+ ++PWMR Q R+RGRQTY+R+QTLELEKEF FN YLTR+RRIE++HAL LTER
Sbjct: 130 SSPTQMFPWMRPQAAPGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALGLTER 189
Query: 281 QIKIWFQNRRMKWKKEN 297
Q+KIWFQNRRMKWKKEN
Sbjct: 190 QVKIWFQNRRMKWKKEN 206
>gi|291461548|dbj|BAI83408.1| deformed [Parasteatoda tepidariorum]
Length = 291
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 61/98 (62%), Positives = 69/98 (70%), Gaps = 13/98 (13%)
Query: 214 NQQPNNTSASLPSPLYPWMRSQ-------------FERKRGRQTYTRYQTLELEKEFHFN 260
+ Q ++ S S +YPWMR E KR R YTR+Q LELEKEFHFN
Sbjct: 121 DAQNSDCSGSDNPVIYPWMRKVHTNNPGVNGVYPGLEPKRQRTAYTRHQILELEKEFHFN 180
Query: 261 RYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
RYLTRRRRIEIAH+LCL+ERQIKIWFQNRRMKWKK+NK
Sbjct: 181 RYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKKDNK 218
>gi|157786818|ref|NP_001099355.1| homeo box D4 [Rattus norvegicus]
gi|149022292|gb|EDL79186.1| homeo box D4 (predicted), isoform CRA_a [Rattus norvegicus]
gi|149022293|gb|EDL79187.1| homeo box D4 (predicted), isoform CRA_a [Rattus norvegicus]
Length = 251
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 61/97 (62%), Positives = 69/97 (71%), Gaps = 11/97 (11%)
Query: 213 PNQQPNNTSASLPSPLYPWMR-----------SQFERKRGRQTYTRYQTLELEKEFHFNR 261
P Q P T+ P+ +YPWM+ + E KR R YTR Q LELEKEFHFNR
Sbjct: 116 PKQPPPGTALKQPAVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNR 175
Query: 262 YLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
YLTRRRRIEIAH LCL+ERQIKIWFQNRRMKWKK++K
Sbjct: 176 YLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 212
>gi|387915092|gb|AFK11155.1| homeobox protein HoxD8 [Callorhinchus milii]
Length = 238
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 57/76 (75%), Positives = 67/76 (88%), Gaps = 1/76 (1%)
Query: 223 SLPSPLYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQ 281
S P+ ++PWMR Q R+RGRQTY+R+QTLELEKEF FN YLTR+RRIE++HAL LTERQ
Sbjct: 130 SSPTQMFPWMRPQAPGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQ 189
Query: 282 IKIWFQNRRMKWKKEN 297
+KIWFQNRRMKWKKEN
Sbjct: 190 VKIWFQNRRMKWKKEN 205
>gi|224813652|gb|ACN65055.1| homeo box B4a [Megalobrama amblycephala]
Length = 246
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 71/134 (52%), Positives = 82/134 (61%), Gaps = 22/134 (16%)
Query: 187 PQHHQVVVNHQQTPPNQP--------PSQPP--NQPPNQQPNNTSASLPSPL-YPWMR-- 233
P+ H + TPP +P PS PP Q P Q +T S P+ YPWM+
Sbjct: 78 PRGHVLPTTALSTPPPEPSHHCDSVTPSPPPACGQTPTSQNTSTVTSRKDPVVYPWMKKV 137
Query: 234 ---------SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKI 284
S E KR R YTR Q LELEKEFH+NRYLTRRRR+EIAH LCL+ERQIKI
Sbjct: 138 HVNIVSPNYSGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTLCLSERQIKI 197
Query: 285 WFQNRRMKWKKENK 298
WFQNRRMKWKK++K
Sbjct: 198 WFQNRRMKWKKDHK 211
>gi|387231427|gb|AFJ72424.1| homeobox B5, partial [Myotis ricketti]
Length = 80
Score = 124 bits (311), Expect = 6e-26, Method: Composition-based stats.
Identities = 60/75 (80%), Positives = 63/75 (84%), Gaps = 1/75 (1%)
Query: 239 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+ERQIKIWFQNRRMKWKK+NK
Sbjct: 6 KRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNK 65
Query: 299 SKDGG-SDAGSDITP 312
K + AGS P
Sbjct: 66 LKSMSLATAGSAFQP 80
>gi|443689506|gb|ELT91880.1| hypothetical protein CAPTEDRAFT_149640 [Capitella teleta]
Length = 254
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 59/97 (60%), Positives = 68/97 (70%), Gaps = 12/97 (12%)
Query: 214 NQQPNNTSASLPSPLYPWMRSQ------------FERKRGRQTYTRYQTLELEKEFHFNR 261
N P+ + P+ +YPWM+ + KR R YTR+Q LELEKEFHFNR
Sbjct: 112 NTSPSIPGSQTPTIIYPWMKKVHMGTATANGGFVGDSKRTRTAYTRHQILELEKEFHFNR 171
Query: 262 YLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
YLTRRRRIEIAH LCL+ERQIKIWFQNRRMKWKKE+K
Sbjct: 172 YLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKEHK 208
>gi|403258699|ref|XP_003921888.1| PREDICTED: homeobox protein Hox-D4 [Saimiri boliviensis
boliviensis]
Length = 255
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 61/97 (62%), Positives = 69/97 (71%), Gaps = 11/97 (11%)
Query: 213 PNQQPNNTSASLPSPLYPWMR-----------SQFERKRGRQTYTRYQTLELEKEFHFNR 261
P Q P T+ P+ +YPWM+ + E KR R YTR Q LELEKEFHFNR
Sbjct: 118 PKQPPPGTALKQPAVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNR 177
Query: 262 YLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
YLTRRRRIEIAH LCL+ERQIKIWFQNRRMKWKK++K
Sbjct: 178 YLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 214
>gi|384940632|gb|AFI33921.1| homeobox protein Hox-D4 [Macaca mulatta]
gi|387540532|gb|AFJ70893.1| homeobox protein Hox-D4 [Macaca mulatta]
Length = 255
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 61/97 (62%), Positives = 69/97 (71%), Gaps = 11/97 (11%)
Query: 213 PNQQPNNTSASLPSPLYPWMR-----------SQFERKRGRQTYTRYQTLELEKEFHFNR 261
P Q P T+ P+ +YPWM+ + E KR R YTR Q LELEKEFHFNR
Sbjct: 118 PKQPPPGTALKQPAVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNR 177
Query: 262 YLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
YLTRRRRIEIAH LCL+ERQIKIWFQNRRMKWKK++K
Sbjct: 178 YLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 214
>gi|345322207|ref|XP_003430544.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-B5-like
[Ornithorhynchus anatinus]
Length = 281
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 64/110 (58%), Positives = 78/110 (70%), Gaps = 13/110 (11%)
Query: 202 NQPPSQPPNQPPNQQPNNTSASL-PSP-LYPWMR-----------SQFERKRGRQTYTRY 248
+Q S P PP ++T+A+ P+P ++PWMR + E KR R YTR
Sbjct: 144 SQLNSSLPRVPPEPSASSTAATEGPAPQIFPWMRKLHISHVNPNYTGGEPKRSRTAYTRQ 203
Query: 249 QTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
Q LELEKEFH+NRYLTRRRR+EIAHALCL+ERQIKIWFQNRRMKWKK++K
Sbjct: 204 QVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWKKDHK 253
>gi|402888721|ref|XP_003907700.1| PREDICTED: homeobox protein Hox-D4 [Papio anubis]
Length = 255
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 61/97 (62%), Positives = 69/97 (71%), Gaps = 11/97 (11%)
Query: 213 PNQQPNNTSASLPSPLYPWMR-----------SQFERKRGRQTYTRYQTLELEKEFHFNR 261
P Q P T+ P+ +YPWM+ + E KR R YTR Q LELEKEFHFNR
Sbjct: 118 PKQPPPGTALKQPAVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNR 177
Query: 262 YLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
YLTRRRRIEIAH LCL+ERQIKIWFQNRRMKWKK++K
Sbjct: 178 YLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 214
>gi|222530736|emb|CAU83356.1| deformed [Parasteatoda tepidariorum]
Length = 289
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 61/98 (62%), Positives = 69/98 (70%), Gaps = 13/98 (13%)
Query: 214 NQQPNNTSASLPSPLYPWMRSQ-------------FERKRGRQTYTRYQTLELEKEFHFN 260
+ Q ++ S S +YPWMR E KR R YTR+Q LELEKEFHFN
Sbjct: 119 DAQNSDCSGSDNPVIYPWMRKVHTNNPGVNGVYPGLEPKRQRTAYTRHQILELEKEFHFN 178
Query: 261 RYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
RYLTRRRRIEIAH+LCL+ERQIKIWFQNRRMKWKK+NK
Sbjct: 179 RYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKKDNK 216
>gi|63103210|gb|AAD46169.2|AF151666_1 deformed homeobox protein [Alitta virens]
Length = 116
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 55/60 (91%), Positives = 56/60 (93%)
Query: 239 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
KR R YTR+Q LELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK
Sbjct: 10 KRTRTAYTRHQVLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 69
>gi|301612429|ref|XP_002935718.1| PREDICTED: homeobox protein Hox-D4a-like isoform 1 [Xenopus
(Silurana) tropicalis]
gi|301612431|ref|XP_002935719.1| PREDICTED: homeobox protein Hox-D4a-like isoform 2 [Xenopus
(Silurana) tropicalis]
Length = 237
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 69/138 (50%), Positives = 84/138 (60%), Gaps = 14/138 (10%)
Query: 186 PPQHHQVVVNHQQTPPNQPPSQPPNQPPNQQPNNTSASLP-SPLYPWMR----------- 233
PP+ H P N S+ +Q Q P N S P + +YPWM+
Sbjct: 85 PPEPFPAAEEHCPAPANLSSSRACSQ--QQHPKNGSLGKPPAIVYPWMKKVHCNSVNPNY 142
Query: 234 SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKW 293
+ E KR R YTR Q LELEKEFHFNRYLTRRRRIEIAH+LCL+ERQIKIWFQNRRMKW
Sbjct: 143 TGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKW 202
Query: 294 KKENKSKDGGSDAGSDIT 311
KK++K + + S ++
Sbjct: 203 KKDHKLPNTKGRSASSLS 220
>gi|332692532|gb|AEE90207.1| Homeobox D8a [Anguilla anguilla]
gi|385654529|gb|AFI62023.1| Hox-D8a [Anguilla japonica]
Length = 234
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 57/76 (75%), Positives = 66/76 (86%), Gaps = 1/76 (1%)
Query: 223 SLPSPLYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQ 281
S PS ++PWMR Q R+RGRQTY+R+QTLELEKEF FN YLTR+RRIE++H L LTERQ
Sbjct: 128 SSPSQMFPWMRPQAPGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHTLALTERQ 187
Query: 282 IKIWFQNRRMKWKKEN 297
+KIWFQNRRMKWKKEN
Sbjct: 188 VKIWFQNRRMKWKKEN 203
>gi|332692533|gb|AEE90208.1| Homeobox D4a [Anguilla anguilla]
gi|385654530|gb|AFI62024.1| Hox-D4a [Anguilla japonica]
Length = 236
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 59/92 (64%), Positives = 66/92 (71%), Gaps = 11/92 (11%)
Query: 218 NNTSASLPSPLYPWMR-----------SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRR 266
N A P+ +YPWM+ + E KR R YTR Q LELEKEFHFNRYLTRR
Sbjct: 115 NGIQAKQPAIVYPWMKKVHVTTVNTDYTGSEPKRSRTAYTRQQVLELEKEFHFNRYLTRR 174
Query: 267 RRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
RRIEIAH LCL+ERQIKIWFQNRRMKWKK++K
Sbjct: 175 RRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 206
>gi|2394296|gb|AAB70263.1| abdominal-A [Tribolium castaneum]
Length = 284
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 62/88 (70%), Positives = 67/88 (76%), Gaps = 15/88 (17%)
Query: 227 PLYPWMR-----SQFER----------KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEI 271
P YPWM S F+R +RGRQTYTR+QTLELEKEFHFN YLTRRRRIEI
Sbjct: 131 PRYPWMSITDWMSPFDRVVCGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEI 190
Query: 272 AHALCLTERQIKIWFQNRRMKWKKENKS 299
AHALCLTERQIKIWFQNRRMK KKE ++
Sbjct: 191 AHALCLTERQIKIWFQNRRMKLKKELRA 218
>gi|254029378|gb|ACT53741.1| ultrabithorax isoform I [Parhyale hawaiensis]
Length = 301
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 58/74 (78%), Positives = 62/74 (83%), Gaps = 3/74 (4%)
Query: 226 SPLYPWMR---SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQI 282
+ YPWM + R+RGRQTYTRYQTLELEKEFH N YLTRRRRIE+AHALCLTERQI
Sbjct: 162 TTFYPWMALAGANGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQI 221
Query: 283 KIWFQNRRMKWKKE 296
KIWFQNRRMK KKE
Sbjct: 222 KIWFQNRRMKLKKE 235
>gi|405109810|emb|CCH51007.1| ultrabithorax, partial [Phalangium opilio]
Length = 219
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 59/76 (77%), Positives = 62/76 (81%), Gaps = 6/76 (7%)
Query: 227 PLYPWM------RSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTER 280
YPWM R+ R+RGRQTYTRYQTLELEKEFH N YLTRRRRIE+AHALCLTER
Sbjct: 92 AFYPWMAIAGLFRANGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTER 151
Query: 281 QIKIWFQNRRMKWKKE 296
QIKIWFQNRRMK KKE
Sbjct: 152 QIKIWFQNRRMKLKKE 167
>gi|20339639|gb|AAM19473.1|AF410915_1 HoxN5 homeobox [Petromyzon marinus]
Length = 60
Score = 124 bits (310), Expect = 7e-26, Method: Composition-based stats.
Identities = 54/59 (91%), Positives = 56/59 (94%)
Query: 239 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 297
KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRM+WKK+N
Sbjct: 2 KRSRTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMRWKKDN 60
>gi|18858835|ref|NP_571193.1| homeobox protein Hox-B4a [Danio rerio]
gi|60392407|sp|P22574.3|HXB4A_DANRE RecName: Full=Homeobox protein Hox-B4a; Short=Hox-B4; AltName:
Full=Homeobox protein Zf-13
gi|4322072|gb|AAD15945.1| homeobox protein [Danio rerio]
gi|190337053|gb|AAI62840.1| Homeo box B4a [Danio rerio]
gi|190337059|gb|AAI62844.1| Homeo box B4a [Danio rerio]
Length = 246
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 70/135 (51%), Positives = 82/135 (60%), Gaps = 19/135 (14%)
Query: 176 PQHMMYAQQPPPQHHQVVVNHQQTPPNQPPSQPPNQPPNQQPNNTSASLPSPL-YPWMR- 233
P + P P HH V P+ PP+ Q P Q +T +S P+ YPWM+
Sbjct: 84 PTTALSTPLPEPSHHCDSVT-----PSPPPAC--GQTPTSQNTSTVSSRKDPVVYPWMKK 136
Query: 234 ----------SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIK 283
S E KR R YTR Q LELEKEFH+NRYLTRRRR+EIAH LCL+ERQIK
Sbjct: 137 VHVNIVSPNYSGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTLCLSERQIK 196
Query: 284 IWFQNRRMKWKKENK 298
IWFQNRRMKWKK++K
Sbjct: 197 IWFQNRRMKWKKDHK 211
>gi|241756280|ref|XP_002406393.1| homeobox protein, putative [Ixodes scapularis]
gi|215506130|gb|EEC15624.1| homeobox protein, putative [Ixodes scapularis]
Length = 162
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 61/80 (76%), Positives = 65/80 (81%), Gaps = 1/80 (1%)
Query: 238 RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 297
R+RGRQTYTRYQTLELEKEFHFN YLTRRRRIEIAHALCLTERQIKIWFQNRRMK KKE
Sbjct: 17 RRRGRQTYTRYQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKEL 76
Query: 298 KS-KDGGSDAGSDITPATSP 316
++ K+ A D SP
Sbjct: 77 RAVKEINEQARLDAKGGKSP 96
>gi|165873661|gb|ABY67955.1| deformed hox protein [Capitella teleta]
Length = 180
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 59/97 (60%), Positives = 68/97 (70%), Gaps = 12/97 (12%)
Query: 214 NQQPNNTSASLPSPLYPWMRSQ------------FERKRGRQTYTRYQTLELEKEFHFNR 261
N P+ + P+ +YPWM+ + KR R YTR+Q LELEKEFHFNR
Sbjct: 38 NTSPSIPGSQTPTIIYPWMKKVHMGTATANGGFVGDSKRTRTAYTRHQILELEKEFHFNR 97
Query: 262 YLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
YLTRRRRIEIAH LCL+ERQIKIWFQNRRMKWKKE+K
Sbjct: 98 YLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKEHK 134
>gi|6015585|emb|CAB57812.1| 24.1 homeo-box protein [Mus musculus]
Length = 68
Score = 124 bits (310), Expect = 7e-26, Method: Composition-based stats.
Identities = 56/62 (90%), Positives = 58/62 (93%)
Query: 239 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+ERQIKIWFQNRRMKWKK+NK
Sbjct: 4 KRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNK 63
Query: 299 SK 300
K
Sbjct: 64 LK 65
>gi|449266119|gb|EMC77229.1| Homeobox protein Hox-C5, partial [Columba livia]
Length = 221
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 57/79 (72%), Positives = 64/79 (81%), Gaps = 5/79 (6%)
Query: 228 LYPWMRS-----QFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQI 282
+YPWM + + KR R +YTRYQTLELEKEFHFNRYLTRRRRIEIA+ LCL ERQI
Sbjct: 139 IYPWMTKLHMSHETDGKRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQI 198
Query: 283 KIWFQNRRMKWKKENKSKD 301
KIWFQNRRMKWKK++K K
Sbjct: 199 KIWFQNRRMKWKKDSKLKS 217
>gi|307178561|gb|EFN67250.1| Homeotic protein Sex combs reduced [Camponotus floridanus]
Length = 98
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 57/62 (91%), Positives = 59/62 (95%)
Query: 237 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
E KR R +YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE
Sbjct: 5 ETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 64
Query: 297 NK 298
+K
Sbjct: 65 HK 66
>gi|2495321|sp|Q28600.1|HXA7_SHEEP RecName: Full=Homeobox protein Hox-A7
gi|1458088|gb|AAB04755.1| Hoxa-7, partial [Ovis aries]
Length = 71
Score = 124 bits (310), Expect = 8e-26, Method: Composition-based stats.
Identities = 60/64 (93%), Positives = 63/64 (98%)
Query: 237 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
+RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE
Sbjct: 3 DRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 62
Query: 297 NKSK 300
+K +
Sbjct: 63 HKEE 66
>gi|74267579|dbj|BAE44288.1| hoxD4a [Oryzias latipes]
gi|83016979|dbj|BAE53500.1| hoxD4a [Oryzias latipes]
Length = 236
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 59/92 (64%), Positives = 66/92 (71%), Gaps = 11/92 (11%)
Query: 218 NNTSASLPSPLYPWMR-----------SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRR 266
N A P+ +YPWM+ + E KR R YTR Q LELEKEFHFNRYLTRR
Sbjct: 115 NGIQAKQPAVVYPWMKKVHVTTVNPDYTGSEPKRSRTAYTRQQVLELEKEFHFNRYLTRR 174
Query: 267 RRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
RRIEIAH LCL+ERQIKIWFQNRRMKWKK++K
Sbjct: 175 RRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 206
>gi|26984638|emb|CAD59115.1| SI:dZ254O17.5 (homeo box protein B4a) [Danio rerio]
Length = 244
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 70/135 (51%), Positives = 82/135 (60%), Gaps = 19/135 (14%)
Query: 176 PQHMMYAQQPPPQHHQVVVNHQQTPPNQPPSQPPNQPPNQQPNNTSASLPSPL-YPWMR- 233
P + P P HH V P+ PP+ Q P Q +T +S P+ YPWM+
Sbjct: 82 PTTALSTPLPEPSHHCDSVT-----PSPPPAC--GQTPTSQNTSTVSSRKDPVVYPWMKK 134
Query: 234 ----------SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIK 283
S E KR R YTR Q LELEKEFH+NRYLTRRRR+EIAH LCL+ERQIK
Sbjct: 135 VHVNIVSPNYSGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTLCLSERQIK 194
Query: 284 IWFQNRRMKWKKENK 298
IWFQNRRMKWKK++K
Sbjct: 195 IWFQNRRMKWKKDHK 209
>gi|154183857|gb|ABS70795.1| Hoxd4a [Haplochromis burtoni]
Length = 235
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 59/92 (64%), Positives = 66/92 (71%), Gaps = 11/92 (11%)
Query: 218 NNTSASLPSPLYPWMR-----------SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRR 266
N A P+ +YPWM+ + E KR R YTR Q LELEKEFHFNRYLTRR
Sbjct: 115 NGIQAKQPAVVYPWMKKVHVTTVNPDYTGSEPKRSRTAYTRQQVLELEKEFHFNRYLTRR 174
Query: 267 RRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
RRIEIAH LCL+ERQIKIWFQNRRMKWKK++K
Sbjct: 175 RRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 206
>gi|119370799|sp|Q1KKS8.1|HXD4A_FUGRU RecName: Full=Homeobox protein Hox-D4a
gi|94482851|gb|ABF22466.1| homeobox protein HoxD4a [Takifugu rubripes]
Length = 233
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 59/92 (64%), Positives = 66/92 (71%), Gaps = 11/92 (11%)
Query: 218 NNTSASLPSPLYPWMR-----------SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRR 266
N T A P+ +YPWM+ + E KR R YTR Q LELEKEFHFNRYLTRR
Sbjct: 114 NGTQAKQPAVVYPWMKKVHVTTVNPDYTGSEPKRSRTAYTRQQVLELEKEFHFNRYLTRR 173
Query: 267 RRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
RRIEIAH LCL+ERQIKIWFQNRRMKW K++K
Sbjct: 174 RRIEIAHTLCLSERQIKIWFQNRRMKWTKDHK 205
>gi|348519803|ref|XP_003447419.1| PREDICTED: homeobox protein Hox-D4a [Oreochromis niloticus]
Length = 265
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 59/92 (64%), Positives = 66/92 (71%), Gaps = 11/92 (11%)
Query: 218 NNTSASLPSPLYPWMR-----------SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRR 266
N A P+ +YPWM+ + E KR R YTR Q LELEKEFHFNRYLTRR
Sbjct: 145 NGIQAKQPAVVYPWMKKVHVTTVNPDYTGSEPKRSRTAYTRQQVLELEKEFHFNRYLTRR 204
Query: 267 RRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
RRIEIAH LCL+ERQIKIWFQNRRMKWKK++K
Sbjct: 205 RRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 236
>gi|123303|sp|P15859.1|SCR_APIME RecName: Full=Homeobox protein H55
gi|155666|gb|AAA27723.1| H55 protein, partial [Apis mellifera]
Length = 86
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 57/62 (91%), Positives = 59/62 (95%)
Query: 237 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
E KR R +YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE
Sbjct: 7 EVKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 66
Query: 297 NK 298
+K
Sbjct: 67 HK 68
>gi|322799530|gb|EFZ20838.1| hypothetical protein SINV_12130 [Solenopsis invicta]
Length = 113
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 57/62 (91%), Positives = 59/62 (95%)
Query: 237 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
E KR R +YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE
Sbjct: 20 ETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 79
Query: 297 NK 298
+K
Sbjct: 80 HK 81
>gi|429510502|gb|AFZ94989.1| transcription factor Hox4 [Petromyzon marinus]
Length = 271
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 58/82 (70%), Positives = 63/82 (76%), Gaps = 11/82 (13%)
Query: 228 LYPWMR-----------SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALC 276
+YPWM+ + E KR R YTR Q LELEKEFHFNRYLTRRRRIEIAHALC
Sbjct: 164 VYPWMKKIHVSTVNPNYTGGELKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHALC 223
Query: 277 LTERQIKIWFQNRRMKWKKENK 298
LTERQIKIWFQNRRMKWKK++K
Sbjct: 224 LTERQIKIWFQNRRMKWKKDHK 245
>gi|301128900|emb|CBL59362.1| HoxD8 [Scyliorhinus canicula]
Length = 239
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 57/76 (75%), Positives = 67/76 (88%), Gaps = 1/76 (1%)
Query: 223 SLPSPLYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQ 281
S P+ ++PWMR Q R+RGRQTY+R+QTLELEKEF FN YLTR+RRIE++HAL LTERQ
Sbjct: 130 SSPTQMFPWMRPQAPGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQ 189
Query: 282 IKIWFQNRRMKWKKEN 297
+KIWFQNRRMKWKKEN
Sbjct: 190 VKIWFQNRRMKWKKEN 205
>gi|432933125|ref|XP_004081817.1| PREDICTED: homeobox protein Hox-D4a-like [Oryzias latipes]
Length = 256
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 59/92 (64%), Positives = 66/92 (71%), Gaps = 11/92 (11%)
Query: 218 NNTSASLPSPLYPWMR-----------SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRR 266
N A P+ +YPWM+ + E KR R YTR Q LELEKEFHFNRYLTRR
Sbjct: 135 NGIQAKQPAVVYPWMKKVHVTTVNPDYTGSEPKRSRTAYTRQQVLELEKEFHFNRYLTRR 194
Query: 267 RRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
RRIEIAH LCL+ERQIKIWFQNRRMKWKK++K
Sbjct: 195 RRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 226
>gi|254029380|gb|ACT53742.1| ultrabithorax isoform II [Parhyale hawaiensis]
Length = 293
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 58/74 (78%), Positives = 62/74 (83%), Gaps = 3/74 (4%)
Query: 226 SPLYPWMR---SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQI 282
+ YPWM + R+RGRQTYTRYQTLELEKEFH N YLTRRRRIE+AHALCLTERQI
Sbjct: 154 TTFYPWMALAGANGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQI 213
Query: 283 KIWFQNRRMKWKKE 296
KIWFQNRRMK KKE
Sbjct: 214 KIWFQNRRMKLKKE 227
>gi|170029613|ref|XP_001842686.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|193806685|sp|B0W1V2.1|ABDA_CULQU RecName: Full=Homeobox protein abdominal-A homolog
gi|167864005|gb|EDS27388.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 216
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 55/62 (88%), Positives = 59/62 (95%)
Query: 238 RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 297
R+RGRQTYTR+QTLELEKEFHFN YLTRRRRIEIAHALCLTERQIKIWFQNRRMK KKE
Sbjct: 43 RRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKEL 102
Query: 298 KS 299
++
Sbjct: 103 RA 104
>gi|405974999|gb|EKC39601.1| Homeobox protein LOX2 [Crassostrea gigas]
Length = 243
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 58/84 (69%), Positives = 64/84 (76%), Gaps = 4/84 (4%)
Query: 217 PNNTSASLPSPLYPWMR----SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIA 272
P P YPWM + +R+RGRQTYTR+QTLELEKEF FNRYLTRRRRIE++
Sbjct: 127 PTTGEGETPPSFYPWMSIVGPNSNQRRRGRQTYTRFQTLELEKEFKFNRYLTRRRRIELS 186
Query: 273 HALCLTERQIKIWFQNRRMKWKKE 296
H LCLTERQIKIWFQNRRMK KKE
Sbjct: 187 HMLCLTERQIKIWFQNRRMKEKKE 210
>gi|109944933|dbj|BAE96994.1| Ultrabithorax [Moina macrocopa]
Length = 336
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 57/72 (79%), Positives = 61/72 (84%), Gaps = 3/72 (4%)
Query: 228 LYPWMR---SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKI 284
YPWM + R+RGRQTYTRYQTLELEKEFH N YLTRRRRIE+AH+LCLTERQIKI
Sbjct: 232 FYPWMAIAGANGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHSLCLTERQIKI 291
Query: 285 WFQNRRMKWKKE 296
WFQNRRMK KKE
Sbjct: 292 WFQNRRMKLKKE 303
>gi|325260873|gb|ADZ04663.1| homeobox C8 [Notophthalmus viridescens]
Length = 244
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/98 (63%), Positives = 73/98 (74%), Gaps = 2/98 (2%)
Query: 201 PNQPPSQPPNQPPNQQPNNTSASLPSPLYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHF 259
P+ S N Q N ++S PS ++PWMR R+ GRQTY+RYQTLELEKEF F
Sbjct: 113 PDCKSSSNSNTSDGQSHLNQTSS-PSLMFPWMRPHAPGRRSGRQTYSRYQTLELEKEFLF 171
Query: 260 NRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 297
N YLTR+RRIE++HAL LTERQ+KIWFQNRRMKWKKEN
Sbjct: 172 NPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKEN 209
>gi|251857551|gb|ACT22571.1| central Hox2 [Convolutriloba retrogemma]
Length = 161
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 55/77 (71%), Positives = 62/77 (80%), Gaps = 2/77 (2%)
Query: 226 SPLYPWMRSQ--FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIK 283
S ++ WM + + KR R YTR+QTLELEKEFHFNRYLTRRRRIEIA+ L LTERQIK
Sbjct: 74 SKMFAWMSKRPPTDCKRTRTAYTRFQTLELEKEFHFNRYLTRRRRIEIANLLALTERQIK 133
Query: 284 IWFQNRRMKWKKENKSK 300
IWFQNRRMKWKK+N K
Sbjct: 134 IWFQNRRMKWKKDNNLK 150
>gi|18150505|gb|AAL61642.1|AF434666_1 Hox4w [Petromyzon marinus]
Length = 271
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/82 (70%), Positives = 63/82 (76%), Gaps = 11/82 (13%)
Query: 228 LYPWMR-----------SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALC 276
+YPWM+ + E KR R YTR Q LELEKEFHFNRYLTRRRRIEIAHALC
Sbjct: 164 VYPWMKKIHVSTVNPNYTGGELKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHALC 223
Query: 277 LTERQIKIWFQNRRMKWKKENK 298
LTERQIKIWFQNRRMKWKK++K
Sbjct: 224 LTERQIKIWFQNRRMKWKKDHK 245
>gi|335371121|gb|AEH57089.1| Hox4 [Bugula neritina]
Length = 233
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/104 (58%), Positives = 72/104 (69%), Gaps = 12/104 (11%)
Query: 207 QPPNQPPNQQPNNTSASLPSP--LYPWMRSQ----------FERKRGRQTYTRYQTLELE 254
+ P+ P N+ + +AS S +YPWM+ + KR R YTR+Q LELE
Sbjct: 101 ETPSTPTNENDSTFTASTNSAVQIYPWMKKLHVSSSNDPDGMDPKRARTAYTRHQILELE 160
Query: 255 KEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
KEFHFNRYLTRRRRIEIAH L L+ERQIKIWFQNRRMKWKKE+K
Sbjct: 161 KEFHFNRYLTRRRRIEIAHTLDLSERQIKIWFQNRRMKWKKEHK 204
>gi|387231485|gb|AFJ72453.1| homeobox B6, partial [Hipposideros armiger]
gi|387231487|gb|AFJ72454.1| homeobox B6, partial [Rhinolophus paradoxolophus]
gi|387231489|gb|AFJ72455.1| homeobox B6, partial [Taphozous melanopogon]
gi|387231491|gb|AFJ72456.1| homeobox B6, partial [Cynopterus sphinx]
gi|387231493|gb|AFJ72457.1| homeobox B6, partial [Rhinolophus pusillus]
gi|387231495|gb|AFJ72458.1| homeobox B6, partial [Hipposideros pomona]
gi|387231497|gb|AFJ72459.1| homeobox B6, partial [Rousettus leschenaultii]
gi|387231499|gb|AFJ72460.1| homeobox B6, partial [Rhinolophus sinicus]
Length = 85
Score = 123 bits (309), Expect = 1e-25, Method: Composition-based stats.
Identities = 57/60 (95%), Positives = 60/60 (100%)
Query: 239 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
+RGRQTYTRYQTLELEKEFH+NRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE+K
Sbjct: 8 RRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKESK 67
>gi|387231441|gb|AFJ72431.1| homeobox B5, partial [Aselliscus stoliczkanus]
gi|387231449|gb|AFJ72435.1| homeobox B5, partial [Rhinolophus sinicus]
Length = 73
Score = 123 bits (309), Expect = 1e-25, Method: Composition-based stats.
Identities = 58/73 (79%), Positives = 61/73 (83%), Gaps = 1/73 (1%)
Query: 241 GRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSK 300
R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+ERQIKIWFQNRRMKWKK+NK K
Sbjct: 1 ARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNKLK 60
Query: 301 DGG-SDAGSDITP 312
+ AGS P
Sbjct: 61 SMSLATAGSAFQP 73
>gi|392301345|gb|AFM55058.1| ultrabithorax, partial [Rhagovelia obesa]
Length = 249
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/122 (56%), Positives = 80/122 (65%), Gaps = 18/122 (14%)
Query: 182 AQQPPPQHHQVVVNHQQTPPNQPPSQPPNQPPNQQPNNTSASLPSPLYPWMR-------S 234
A P P +Q + TP + P+ P+ P +QQ + + YPWM +
Sbjct: 136 ASTPGPAWNQCSI----TPTSGQPAVAPS-PLHQQASQHT------FYPWMAIAGTFVGA 184
Query: 235 QFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWK 294
R+RGRQTYTRYQTLELEKEFH N YLTRRRRIE+AHALCLTERQIKIWFQNRRMK K
Sbjct: 185 NGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLK 244
Query: 295 KE 296
KE
Sbjct: 245 KE 246
>gi|2495331|sp|Q05007.1|ABDA_ARTSF RecName: Full=Homeobox protein abdominal-A homolog
gi|11098|emb|CAA49681.1| adbA [Artemia franciscana]
Length = 139
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/62 (90%), Positives = 59/62 (95%)
Query: 238 RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 297
R+RGRQTYTRYQTLELEKEFHFN YLTRRRRIEIAHALCLTERQIKIWFQNRRMK KKE
Sbjct: 6 RRRGRQTYTRYQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKEL 65
Query: 298 KS 299
++
Sbjct: 66 RA 67
>gi|332242648|ref|XP_003270495.1| PREDICTED: homeobox protein Hox-A5-like isoform 1 [Nomascus
leucogenys]
Length = 300
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/80 (70%), Positives = 62/80 (77%), Gaps = 9/80 (11%)
Query: 228 LYPWMR---------SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWMR + E KR R YTR Q LELEKEFHFNRYLTRRRRIEIAH LCL+
Sbjct: 176 IYPWMRKLHISHDNYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLS 235
Query: 279 ERQIKIWFQNRRMKWKKENK 298
ERQ+KIWFQNRRMKWKK++K
Sbjct: 236 ERQVKIWFQNRRMKWKKDHK 255
>gi|62526085|dbj|BAD95559.1| Hoxa-7 [Pelodiscus sinensis]
Length = 180
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 55/61 (90%), Positives = 58/61 (95%), Gaps = 1/61 (1%)
Query: 228 LYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWMRS +RKRGRQTYTRYQTL+LEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF
Sbjct: 118 IYPWMRSSGPDRKRGRQTYTRYQTLKLEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 177
Query: 287 Q 287
Q
Sbjct: 178 Q 178
>gi|291290871|ref|NP_001167466.1| homeobox D4 [Xenopus laevis]
gi|83405607|gb|AAI10766.1| Unknown (protein for MGC:131092) [Xenopus laevis]
Length = 237
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/92 (64%), Positives = 67/92 (72%), Gaps = 11/92 (11%)
Query: 218 NNTSASLPSPLYPWMR-----------SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRR 266
N T P+ +YPWM+ + E KR R YTR Q LELEKEFHFNRYLTRR
Sbjct: 116 NGTLGKPPAIVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRR 175
Query: 267 RRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
RRIEIAH+LCL+ERQIKIWFQNRRMKWKK++K
Sbjct: 176 RRIEIAHSLCLSERQIKIWFQNRRMKWKKDHK 207
>gi|241756306|ref|XP_002406404.1| fushi tarazu, putative [Ixodes scapularis]
gi|215506141|gb|EEC15635.1| fushi tarazu, putative [Ixodes scapularis]
Length = 110
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/64 (90%), Positives = 59/64 (92%)
Query: 239 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
KR RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHAL LTERQIKIWFQNRRMK KKENK
Sbjct: 16 KRTRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALGLTERQIKIWFQNRRMKAKKENK 75
Query: 299 SKDG 302
+ G
Sbjct: 76 LQGG 79
>gi|426372798|ref|XP_004053303.1| PREDICTED: homeobox protein Hox-C8 [Gorilla gorilla gorilla]
Length = 242
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/98 (63%), Positives = 73/98 (74%), Gaps = 2/98 (2%)
Query: 201 PNQPPSQPPNQPPNQQPNNTSASLPSPLYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHF 259
P+ S N Q N ++S PS ++PWMR R+ GRQTY+RYQTLELEKEF F
Sbjct: 112 PDCKSSANSNSSEGQGHLNQNSS-PSLMFPWMRPHAPGRRSGRQTYSRYQTLELEKEFLF 170
Query: 260 NRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 297
N YLTR+RRIE++HAL LTERQ+KIWFQNRRMKWKKEN
Sbjct: 171 NPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKEN 208
>gi|157816124|gb|ABV82080.1| homeobox protein HoxC8aa2 [Salmo salar]
Length = 250
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/75 (76%), Positives = 65/75 (86%), Gaps = 1/75 (1%)
Query: 223 SLPSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQI 282
S PS ++PWMR R+ GRQTY+RYQTLELEKEF FN YLTR+RRIE++HAL LTERQ+
Sbjct: 131 SSPSIMFPWMRPH-GRRNGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALSLTERQV 189
Query: 283 KIWFQNRRMKWKKEN 297
KIWFQNRRMKWKKEN
Sbjct: 190 KIWFQNRRMKWKKEN 204
>gi|157124062|ref|XP_001660313.1| hypothetical protein AaeL_AAEL009742 [Aedes aegypti]
gi|193806367|sp|P29552.2|ABDA_AEDAE RecName: Full=Homeobox protein abdominal-A homolog
gi|108874132|gb|EAT38357.1| AAEL009742-PA [Aedes aegypti]
Length = 239
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 55/62 (88%), Positives = 59/62 (95%)
Query: 238 RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 297
R+RGRQTYTR+QTLELEKEFHFN YLTRRRRIEIAHALCLTERQIKIWFQNRRMK KKE
Sbjct: 21 RRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKEL 80
Query: 298 KS 299
++
Sbjct: 81 RA 82
>gi|390467745|ref|XP_003733816.1| PREDICTED: homeobox protein Hox-C8-like [Callithrix jacchus]
Length = 220
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/98 (63%), Positives = 73/98 (74%), Gaps = 2/98 (2%)
Query: 201 PNQPPSQPPNQPPNQQPNNTSASLPSPLYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHF 259
P+ S N Q N ++S PS ++PWMR R+ GRQTY+RYQTLELEKEF F
Sbjct: 90 PDCKSSANTNSSEGQGHLNQNSS-PSLMFPWMRPHAPGRRSGRQTYSRYQTLELEKEFLF 148
Query: 260 NRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 297
N YLTR+RRIE++HAL LTERQ+KIWFQNRRMKWKKEN
Sbjct: 149 NPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKEN 186
>gi|332839192|ref|XP_003313690.1| PREDICTED: homeobox protein Hox-C8 [Pan troglodytes]
Length = 242
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/98 (63%), Positives = 73/98 (74%), Gaps = 2/98 (2%)
Query: 201 PNQPPSQPPNQPPNQQPNNTSASLPSPLYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHF 259
P+ S N Q N ++S PS ++PWMR R+ GRQTY+RYQTLELEKEF F
Sbjct: 112 PDCKSSANTNSSEGQGHLNQNSS-PSLMFPWMRPHAPGRRSGRQTYSRYQTLELEKEFLF 170
Query: 260 NRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 297
N YLTR+RRIE++HAL LTERQ+KIWFQNRRMKWKKEN
Sbjct: 171 NPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKEN 208
>gi|301128888|emb|CBL59351.1| HoxB4 [Scyliorhinus canicula]
Length = 241
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/105 (60%), Positives = 71/105 (67%), Gaps = 11/105 (10%)
Query: 205 PSQPPNQPPNQQPNNTSASLPSPLYPWMRSQF-----------ERKRGRQTYTRYQTLEL 253
PS PP+ N NT S +YPWM+ E KR R YTR Q LEL
Sbjct: 101 PSPPPSCSQNFSNQNTPCSKEPVVYPWMKKLHINVVNPNYKGGEPKRSRTAYTRQQVLEL 160
Query: 254 EKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
EKEFHFNRYLTRRRR+EIAH+LCL+ERQIKIWFQNRRMKWKK++K
Sbjct: 161 EKEFHFNRYLTRRRRVEIAHSLCLSERQIKIWFQNRRMKWKKDHK 205
>gi|387231451|gb|AFJ72436.1| homeobox B5, partial [Rhinolophus affinis]
Length = 72
Score = 123 bits (308), Expect = 1e-25, Method: Composition-based stats.
Identities = 58/72 (80%), Positives = 61/72 (84%), Gaps = 1/72 (1%)
Query: 242 RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSKD 301
R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+ERQIKIWFQNRRMKWKK+NK K
Sbjct: 1 RTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNKLKS 60
Query: 302 GG-SDAGSDITP 312
+ AGS P
Sbjct: 61 MSLATAGSAFQP 72
>gi|444513898|gb|ELV10483.1| Homeobox protein Hox-C8 [Tupaia chinensis]
Length = 242
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/98 (63%), Positives = 73/98 (74%), Gaps = 2/98 (2%)
Query: 201 PNQPPSQPPNQPPNQQPNNTSASLPSPLYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHF 259
P+ S N Q N ++S PS ++PWMR R+ GRQTY+RYQTLELEKEF F
Sbjct: 112 PDCKSSANTNSSEGQGHLNQNSS-PSLMFPWMRPHAPGRRSGRQTYSRYQTLELEKEFLF 170
Query: 260 NRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 297
N YLTR+RRIE++HAL LTERQ+KIWFQNRRMKWKKEN
Sbjct: 171 NPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKEN 208
>gi|12056969|ref|NP_073149.1| homeobox protein Hox-C8 [Homo sapiens]
gi|13124745|sp|P31273.2|HXC8_HUMAN RecName: Full=Homeobox protein Hox-C8; AltName: Full=Homeobox
protein Hox-3A
gi|11993923|gb|AAG42146.1| HOXC8 [Homo sapiens]
gi|31753106|gb|AAH53898.1| Homeobox C8 [Homo sapiens]
gi|119617149|gb|EAW96743.1| homeobox C8 [Homo sapiens]
gi|158255354|dbj|BAF83648.1| unnamed protein product [Homo sapiens]
gi|208968511|dbj|BAG74094.1| homeobox C8 [synthetic construct]
Length = 242
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/98 (63%), Positives = 73/98 (74%), Gaps = 2/98 (2%)
Query: 201 PNQPPSQPPNQPPNQQPNNTSASLPSPLYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHF 259
P+ S N Q N ++S PS ++PWMR R+ GRQTY+RYQTLELEKEF F
Sbjct: 112 PDCKSSANTNSSEGQGHLNQNSS-PSLMFPWMRPHAPGRRSGRQTYSRYQTLELEKEFLF 170
Query: 260 NRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 297
N YLTR+RRIE++HAL LTERQ+KIWFQNRRMKWKKEN
Sbjct: 171 NPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKEN 208
>gi|426432569|gb|ADO33070.2| ultrabithorax [Biston betularia]
Length = 254
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/89 (70%), Positives = 67/89 (75%), Gaps = 9/89 (10%)
Query: 211 QPPNQQPNNTSASLPSPLYPWMR---SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRR 267
QP QP N + YPWM + R+RGRQTYTRYQTLELEKEFH N YLTRRR
Sbjct: 136 QPVQHQPTNHT------FYPWMAIAGANGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRR 189
Query: 268 RIEIAHALCLTERQIKIWFQNRRMKWKKE 296
RIE+AHALCLTERQIKIWFQNRRMK KKE
Sbjct: 190 RIEMAHALCLTERQIKIWFQNRRMKLKKE 218
>gi|5441267|dbj|BAA82361.1| Hoxd-4 [Paralichthys olivaceus]
Length = 235
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/92 (64%), Positives = 65/92 (70%), Gaps = 11/92 (11%)
Query: 218 NNTSASLPSPLYPWMRSQF-----------ERKRGRQTYTRYQTLELEKEFHFNRYLTRR 266
N A P+ +YPWM+ E KR R YTR Q LELEKEFHFNRYLTRR
Sbjct: 115 NGIQAKQPAVVYPWMKKVHVTTVNPDYTGPEPKRSRTAYTRQQVLELEKEFHFNRYLTRR 174
Query: 267 RRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
RRIEIAH LCL+ERQIKIWFQNRRMKWKK++K
Sbjct: 175 RRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 206
>gi|21362261|ref|NP_034596.1| homeobox protein Hox-C8 [Mus musculus]
gi|309319783|ref|NP_001170797.2| homeobox protein Hox-C8 [Rattus norvegicus]
gi|297466159|ref|XP_002704291.1| PREDICTED: homeobox protein Hox-C8 [Bos taurus]
gi|297474428|ref|XP_002687278.1| PREDICTED: homeobox protein Hox-C8 [Bos taurus]
gi|332207728|ref|XP_003252948.1| PREDICTED: homeobox protein Hox-C8 [Nomascus leucogenys]
gi|395744374|ref|XP_003778096.1| PREDICTED: homeobox protein Hox-C8 [Pongo abelii]
gi|395835045|ref|XP_003790495.1| PREDICTED: homeobox protein Hox-C8 [Otolemur garnettii]
gi|397521941|ref|XP_003831041.1| PREDICTED: homeobox protein Hox-C8 [Pan paniscus]
gi|402886199|ref|XP_003906525.1| PREDICTED: homeobox protein Hox-C8 [Papio anubis]
gi|403296833|ref|XP_003939299.1| PREDICTED: homeobox protein Hox-C8 [Saimiri boliviensis
boliviensis]
gi|410964583|ref|XP_003988833.1| PREDICTED: homeobox protein Hox-C8 [Felis catus]
gi|426224346|ref|XP_004006332.1| PREDICTED: homeobox protein Hox-C8 [Ovis aries]
gi|123275|sp|P09025.2|HXC8_MOUSE RecName: Full=Homeobox protein Hox-C8; AltName: Full=Homeobox
protein Hox-3.1; AltName: Full=Homeobox protein M31
gi|51403|emb|CAA30486.1| unnamed protein product [Mus musculus]
gi|51407|emb|CAA30319.1| unnamed protein product [Mus musculus]
gi|193979|gb|AAA37857.1| Hox-3.1 protein [Mus musculus]
gi|148671997|gb|EDL03944.1| homeobox C8 [Mus musculus]
gi|157170186|gb|AAI52854.1| Homeo box C8 [synthetic construct]
gi|281342176|gb|EFB17760.1| hypothetical protein PANDA_012613 [Ailuropoda melanoleuca]
gi|290461969|gb|ACF33180.2| homeobox C8 [Ovis aries]
gi|296487929|tpg|DAA30042.1| TPA: homeobox C8-like [Bos taurus]
gi|351706135|gb|EHB09054.1| Homeobox protein Hox-C8 [Heterocephalus glaber]
gi|355564295|gb|EHH20795.1| Homeobox protein Hox-3A [Macaca mulatta]
gi|355786153|gb|EHH66336.1| Homeobox protein Hox-3A [Macaca fascicularis]
gi|410223818|gb|JAA09128.1| homeobox C8 [Pan troglodytes]
gi|410261474|gb|JAA18703.1| homeobox C8 [Pan troglodytes]
gi|431921606|gb|ELK18958.1| Homeobox protein Hox-C8 [Pteropus alecto]
gi|440900714|gb|ELR51792.1| Homeobox protein Hox-C8 [Bos grunniens mutus]
Length = 242
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/98 (63%), Positives = 73/98 (74%), Gaps = 2/98 (2%)
Query: 201 PNQPPSQPPNQPPNQQPNNTSASLPSPLYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHF 259
P+ S N Q N ++S PS ++PWMR R+ GRQTY+RYQTLELEKEF F
Sbjct: 112 PDCKSSANTNSSEGQGHLNQNSS-PSLMFPWMRPHAPGRRSGRQTYSRYQTLELEKEFLF 170
Query: 260 NRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 297
N YLTR+RRIE++HAL LTERQ+KIWFQNRRMKWKKEN
Sbjct: 171 NPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKEN 208
>gi|354490229|ref|XP_003507262.1| PREDICTED: homeobox protein Hox-C8-like, partial [Cricetulus
griseus]
Length = 214
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/98 (63%), Positives = 73/98 (74%), Gaps = 2/98 (2%)
Query: 201 PNQPPSQPPNQPPNQQPNNTSASLPSPLYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHF 259
P+ S N Q N ++S PS ++PWMR R+ GRQTY+RYQTLELEKEF F
Sbjct: 84 PDCKSSANTNSSEGQGHLNQNSS-PSLMFPWMRPHAPGRRSGRQTYSRYQTLELEKEFLF 142
Query: 260 NRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 297
N YLTR+RRIE++HAL LTERQ+KIWFQNRRMKWKKEN
Sbjct: 143 NPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKEN 180
>gi|344266083|ref|XP_003405110.1| PREDICTED: homeobox protein Hox-C8-like [Loxodonta africana]
Length = 242
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/98 (63%), Positives = 73/98 (74%), Gaps = 2/98 (2%)
Query: 201 PNQPPSQPPNQPPNQQPNNTSASLPSPLYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHF 259
P+ S N Q N ++S PS ++PWMR R+ GRQTY+RYQTLELEKEF F
Sbjct: 112 PDCKSSANTNSSEGQGHLNQNSS-PSLMFPWMRPHAPGRRSGRQTYSRYQTLELEKEFLF 170
Query: 260 NRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 297
N YLTR+RRIE++HAL LTERQ+KIWFQNRRMKWKKEN
Sbjct: 171 NPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKEN 208
>gi|121308833|dbj|BAF43723.1| transcription factor Hox4 [Metacrinus rotundus]
Length = 280
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/105 (60%), Positives = 72/105 (68%), Gaps = 15/105 (14%)
Query: 228 LYPWMR------------SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHAL 275
LYPWM+ + E KR R +YTR Q LELEKEFHFNRYLTRRRRIEIA AL
Sbjct: 164 LYPWMKRLHVNPGLMAGLAGMEAKRSRTSYTRQQILELEKEFHFNRYLTRRRRIEIAQAL 223
Query: 276 CLTERQIKIWFQNRRMKWKKEN---KSKDGGSDAGSDITPATSPQ 317
L+ERQIKIWFQNRRMKWKK+N +K+ S GS+ T +S Q
Sbjct: 224 GLSERQIKIWFQNRRMKWKKDNNLPNTKNTKSATGSNRTVNSSNQ 268
>gi|3005954|emb|CAA76297.1| homeodomain protein [Lineus sanguineus]
Length = 96
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/61 (93%), Positives = 59/61 (96%)
Query: 237 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
E+KR RQTYTRYQTLELEKEFHFN+YLTRRRRIEIAHAL LTERQIKIWFQNRRMKWKKE
Sbjct: 9 EQKRTRQTYTRYQTLELEKEFHFNKYLTRRRRIEIAHALGLTERQIKIWFQNRRMKWKKE 68
Query: 297 N 297
N
Sbjct: 69 N 69
>gi|224856|prf||1202268A Sex combs reduced gene
Length = 74
Score = 122 bits (307), Expect = 2e-25, Method: Composition-based stats.
Identities = 57/68 (83%), Positives = 61/68 (89%)
Query: 231 WMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRR 290
+ S + KR R +YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRR
Sbjct: 1 YCESNGQTKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRR 60
Query: 291 MKWKKENK 298
MKWKKE+K
Sbjct: 61 MKWKKEHK 68
>gi|390178469|ref|XP_003736653.1| Ubx, isoform B [Drosophila pseudoobscura pseudoobscura]
gi|388859455|gb|EIM52726.1| Ubx, isoform B [Drosophila pseudoobscura pseudoobscura]
Length = 360
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/82 (71%), Positives = 61/82 (74%), Gaps = 12/82 (14%)
Query: 227 PLYPWMRSQFE------------RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHA 274
YPWM E R+RGRQTYTRYQTLELEKEFH N YLTRRRRIE+AHA
Sbjct: 242 TFYPWMAIAGECPEDPTKSTNGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHA 301
Query: 275 LCLTERQIKIWFQNRRMKWKKE 296
LCLTERQIKIWFQNRRMK KKE
Sbjct: 302 LCLTERQIKIWFQNRRMKLKKE 323
>gi|11106|emb|CAA49685.1| Scr [Artemia franciscana]
Length = 109
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 55/62 (88%), Positives = 58/62 (93%)
Query: 237 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
E KR R +YTRYQTLELEKEFHFNRYLTRRRRIEIAH LCL+ERQIKIWFQNRRMKWKKE
Sbjct: 7 ETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKE 66
Query: 297 NK 298
+K
Sbjct: 67 HK 68
>gi|410934533|gb|AFV93983.1| homeodomain-containing protein Hox8, partial [Branchiostoma
lanceolatum]
Length = 100
Score = 122 bits (307), Expect = 2e-25, Method: Composition-based stats.
Identities = 67/100 (67%), Positives = 74/100 (74%), Gaps = 13/100 (13%)
Query: 224 LPSPLYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQI 282
L P YPWMR+ ER+RGRQTY+RYQTLELEKEFHFN+YLTRRRRIEIAHAL LTERQI
Sbjct: 1 LAIPFYPWMRTAGPERRRGRQTYSRYQTLELEKEFHFNKYLTRRRRIEIAHALGLTERQI 60
Query: 283 KIWFQNRRMKWKKE------------NKSKDGGSDAGSDI 310
KIWFQNRRMK KKE KS DG S+ ++
Sbjct: 61 KIWFQNRRMKLKKEAAMLCPPKVEETEKSSDGQSEKSEEV 100
>gi|242014140|ref|XP_002427754.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212512201|gb|EEB15016.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 153
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 55/62 (88%), Positives = 59/62 (95%)
Query: 238 RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 297
R+RGRQTYTR+QTLELEKEFHFN YLTRRRRIEIAHALCLTERQIKIWFQNRRMK KKE
Sbjct: 27 RRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKEL 86
Query: 298 KS 299
++
Sbjct: 87 RA 88
>gi|157137587|ref|XP_001664020.1| hypothetical protein AaeL_AAEL013832 [Aedes aegypti]
Length = 248
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/77 (75%), Positives = 64/77 (83%), Gaps = 6/77 (7%)
Query: 229 YPWMRSQFE------RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQI 282
+ W S+F R+RGRQTYTR+QTLELEKEFHFN YLTRRRRIEIAHALCLTERQI
Sbjct: 15 WVWKFSEFYCPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQI 74
Query: 283 KIWFQNRRMKWKKENKS 299
KIWFQNRRMK KKE ++
Sbjct: 75 KIWFQNRRMKLKKELRA 91
>gi|20339633|gb|AAM19470.1|AF410912_1 HoxJ5 homeobox [Petromyzon marinus]
Length = 60
Score = 122 bits (307), Expect = 2e-25, Method: Composition-based stats.
Identities = 52/59 (88%), Positives = 56/59 (94%)
Query: 239 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 297
KR R YTRYQTLELEKEFHFNRYLTRRRRIE+A+ALCL+ERQIKIWFQNRRMKWKK+N
Sbjct: 2 KRSRTAYTRYQTLELEKEFHFNRYLTRRRRIEVANALCLSERQIKIWFQNRRMKWKKDN 60
>gi|2911356|gb|AAC04332.1| homeobox protein HoxQ8 [Petromyzon marinus]
Length = 272
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 55/71 (77%), Positives = 64/71 (90%), Gaps = 1/71 (1%)
Query: 228 LYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
++PWMR Q R+RGRQTY+R+QTLELEKEF FN YLTR+RRIE++HAL LTERQ+KIWF
Sbjct: 163 MFPWMRPQGPGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWF 222
Query: 287 QNRRMKWKKEN 297
QNRRMKWKKEN
Sbjct: 223 QNRRMKWKKEN 233
>gi|322799471|gb|EFZ20779.1| hypothetical protein SINV_00447 [Solenopsis invicta]
Length = 195
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 55/62 (88%), Positives = 59/62 (95%)
Query: 238 RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 297
R+RGRQTYTR+QTLELEKEFHFN YLTRRRRIEIAHALCLTERQIKIWFQNRRMK KKE
Sbjct: 69 RRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKEL 128
Query: 298 KS 299
++
Sbjct: 129 RA 130
>gi|214984|gb|AAA50029.1| homeo-box region peptide, partial [Danio rerio]
Length = 68
Score = 122 bits (307), Expect = 2e-25, Method: Composition-based stats.
Identities = 54/65 (83%), Positives = 58/65 (89%)
Query: 239 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
KR R +YTRYQTLELEKEFHFNRYLTRRRRIEIA+ LCL ERQIKIWFQNRRMKWKK++K
Sbjct: 2 KRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRMKWKKDSK 61
Query: 299 SKDGG 303
K G
Sbjct: 62 LKVKG 66
>gi|359754109|gb|AEV59530.1| HOXC8 [Macropus eugenii]
Length = 242
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/76 (75%), Positives = 65/76 (85%), Gaps = 1/76 (1%)
Query: 223 SLPSPLYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQ 281
S PS ++PWMR R+ GRQTY+RYQTLELEKEF FN YLTR+RRIE++HAL LTERQ
Sbjct: 133 SSPSLMFPWMRPHAPGRRSGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQ 192
Query: 282 IKIWFQNRRMKWKKEN 297
+KIWFQNRRMKWKKEN
Sbjct: 193 VKIWFQNRRMKWKKEN 208
>gi|123204474|gb|ABM73563.1| homeodomain protein [Megalobrama amblycephala]
Length = 59
Score = 122 bits (307), Expect = 2e-25, Method: Composition-based stats.
Identities = 53/56 (94%), Positives = 55/56 (98%)
Query: 238 RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKW 293
RKRGRQTY+RYQTLELE EFHFNRYL+RRRRIEIAHALCLTERQIKIWFQNRRMKW
Sbjct: 4 RKRGRQTYSRYQTLELEIEFHFNRYLSRRRRIEIAHALCLTERQIKIWFQNRRMKW 59
>gi|290563452|ref|NP_001166809.1| abdominal A isoform 3 [Bombyx mori]
gi|164682500|gb|ABY66347.1| homeobox protein [Bombyx mori]
Length = 343
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/96 (65%), Positives = 71/96 (73%), Gaps = 16/96 (16%)
Query: 220 TSASLPS-PLYPWMRSQ-----FER----------KRGRQTYTRYQTLELEKEFHFNRYL 263
++ +LP P YPWM F+R +RGRQTYTR+QTLELEKEFHFN YL
Sbjct: 184 SAQTLPEIPRYPWMSITDWMNPFDRVVCGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYL 243
Query: 264 TRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKS 299
TRRRRIEIAHALCLTERQIKIWFQNRRMK KKE ++
Sbjct: 244 TRRRRIEIAHALCLTERQIKIWFQNRRMKLKKELRA 279
>gi|214264|gb|AAA49755.1| homeobox protein, partial [Xenopus laevis]
Length = 60
Score = 122 bits (307), Expect = 2e-25, Method: Composition-based stats.
Identities = 53/59 (89%), Positives = 55/59 (93%)
Query: 239 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 297
KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAH LCL+ERQIKIWFQNRRMKWKK+N
Sbjct: 2 KRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDN 60
>gi|47228654|emb|CAG07386.1| unnamed protein product [Tetraodon nigroviridis]
Length = 482
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/78 (73%), Positives = 64/78 (82%), Gaps = 5/78 (6%)
Query: 228 LYPWMRS-----QFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQI 282
+YPWM + + KR R +YTRYQTLELEKEFHFNRYL+RRRRIEIAH LCL ERQI
Sbjct: 48 IYPWMTKLHMNHESDGKRSRTSYTRYQTLELEKEFHFNRYLSRRRRIEIAHNLCLNERQI 107
Query: 283 KIWFQNRRMKWKKENKSK 300
KIWFQNRRMKWKK++K K
Sbjct: 108 KIWFQNRRMKWKKDSKIK 125
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 60/100 (60%), Positives = 71/100 (71%), Gaps = 11/100 (11%)
Query: 210 NQPPNQQPNNTSASLPSPLYPWMRSQ-----------FERKRGRQTYTRYQTLELEKEFH 258
NQ + PN+T++S +YPWM+ E KR R YTR Q LELEKEFH
Sbjct: 333 NQATPEHPNSTASSKQPVVYPWMKKIHVSTVNSAYNGTEPKRSRTAYTRQQVLELEKEFH 392
Query: 259 FNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
+NRYLTRRRRIEIAHAL L+ERQIKIWFQNRRMKWKK+++
Sbjct: 393 YNRYLTRRRRIEIAHALVLSERQIKIWFQNRRMKWKKDHR 432
>gi|395826614|ref|XP_003786512.1| PREDICTED: homeobox protein Hox-B4 [Otolemur garnettii]
Length = 251
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/150 (48%), Positives = 87/150 (58%), Gaps = 24/150 (16%)
Query: 174 PPPQHMMYAQQPPPQHHQVVVNHQQTPPNQPPSQPPNQPPNQQPNNTSASLPSPLYPWMR 233
PPP + P+ Q +PP P +Q P P P++++ P +YPWMR
Sbjct: 96 PPPAGALL-----PESGQRCEAVSSSPPPLPCAQNPLHP---SPSHSACKEPV-VYPWMR 146
Query: 234 -----------SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQI 282
+ E KR R YTR Q LELEKEFH+NRYLTRRRR+EIAHALCL+ERQI
Sbjct: 147 KVHVSTVNPNYAGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQI 206
Query: 283 KIWFQNRRMKWKKE----NKSKDGGSDAGS 308
KIWFQNRRMKWKK+ N G AGS
Sbjct: 207 KIWFQNRRMKWKKDHKLPNTKIRSGGTAGS 236
>gi|332242650|ref|XP_003270496.1| PREDICTED: homeobox protein Hox-A5-like isoform 2 [Nomascus
leucogenys]
Length = 302
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/82 (68%), Positives = 62/82 (75%), Gaps = 11/82 (13%)
Query: 228 LYPWMR-----------SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALC 276
+YPWMR + E KR R YTR Q LELEKEFHFNRYLTRRRRIEIAH LC
Sbjct: 176 IYPWMRKLHISHVNPSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLC 235
Query: 277 LTERQIKIWFQNRRMKWKKENK 298
L+ERQ+KIWFQNRRMKWKK++K
Sbjct: 236 LSERQVKIWFQNRRMKWKKDHK 257
>gi|47971146|dbj|BAD22530.1| LjHox5i Homeobox [Lethenteron camtschaticum]
Length = 85
Score = 122 bits (306), Expect = 2e-25, Method: Composition-based stats.
Identities = 64/82 (78%), Positives = 66/82 (80%), Gaps = 9/82 (10%)
Query: 228 LYPWMR---------SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWMR S E KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT
Sbjct: 3 IYPWMRKLHLNHDGMSGPEGKRSRTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 62
Query: 279 ERQIKIWFQNRRMKWKKENKSK 300
ERQIKIWFQNRRMKWKK+NK K
Sbjct: 63 ERQIKIWFQNRRMKWKKDNKLK 84
>gi|395540851|ref|XP_003772364.1| PREDICTED: homeobox protein Hox-C8 [Sarcophilus harrisii]
Length = 242
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/208 (40%), Positives = 108/208 (51%), Gaps = 33/208 (15%)
Query: 110 QNGHQTPVVYASCKLQAAVGN--GIIPGPESPNDLVDPTLNNHHHHQ---HHHMNHHPHP 164
+ G Y C+ +VG ++ GP S P+ + HH HH
Sbjct: 14 KGGESLEPAYYDCRFPQSVGRSHALVYGPGS----TAPSFQHASHHVQDFFHHGTSSISN 69
Query: 165 HPQQQQPQ--------------QPPPQHMMYAQQPPPQHHQVVVNHQQTPPNQPPSQPPN 210
QQ P + P+ +Y +P P+ VV + P+ S N
Sbjct: 70 SGYQQNPCSLSCHGDASKFYGYEALPRQPLYGAEPEPR----VVQY----PDCKSSANSN 121
Query: 211 QPPNQQPNNTSASLPSPLYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRI 269
Q N ++S PS ++PWMR R+ GRQTY+RYQTLELEKEF FN YLTR+RRI
Sbjct: 122 SNEGQGHLNQNSS-PSLMFPWMRPHAPGRRSGRQTYSRYQTLELEKEFLFNPYLTRKRRI 180
Query: 270 EIAHALCLTERQIKIWFQNRRMKWKKEN 297
E++HAL LTERQ+KIWFQNRRMKWKKEN
Sbjct: 181 EVSHALGLTERQVKIWFQNRRMKWKKEN 208
>gi|119617151|gb|EAW96745.1| hCG2044076 [Homo sapiens]
Length = 70
Score = 122 bits (306), Expect = 2e-25, Method: Composition-based stats.
Identities = 53/62 (85%), Positives = 57/62 (91%)
Query: 239 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
KR R +YTRYQTLELEKEFHFNRYLTRRRRIEIA+ LCL ERQIKIWFQNRRMKWKK++K
Sbjct: 4 KRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRMKWKKDSK 63
Query: 299 SK 300
K
Sbjct: 64 MK 65
>gi|405967565|gb|EKC32713.1| Homeobox protein Hox-B4a [Crassostrea gigas]
Length = 251
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/100 (61%), Positives = 70/100 (70%), Gaps = 13/100 (13%)
Query: 228 LYPWMRSQ----------FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 277
+YPWM+ E KR R YTR+Q LELEKEFHFNRYLTRRRRIEIAH LCL
Sbjct: 137 IYPWMKKSQGNNPGNSLVSESKRNRTAYTRHQILELEKEFHFNRYLTRRRRIEIAHTLCL 196
Query: 278 TERQIKIWFQNRRMKWKKENK---SKDGGSDAGSDITPAT 314
+ERQIKIWFQNRRMKWKKE+K +K +AG+ + T
Sbjct: 197 SERQIKIWFQNRRMKWKKEHKLPNTKTRLMEAGTGLLDPT 236
>gi|1334622|emb|CAA35170.1| unnamed protein product [Danio rerio]
Length = 96
Score = 122 bits (306), Expect = 2e-25, Method: Composition-based stats.
Identities = 55/60 (91%), Positives = 59/60 (98%)
Query: 237 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
+R+RGRQ Y+RYQTLELEKEFHFNRYLTRRRRIEIA+ALCLTERQIKIWFQNRRMKWKKE
Sbjct: 6 DRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 65
>gi|429510510|gb|AFZ94993.1| transcription factor Hox8 [Petromyzon marinus]
Length = 274
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 55/71 (77%), Positives = 64/71 (90%), Gaps = 1/71 (1%)
Query: 228 LYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
++PWMR Q R+RGRQTY+R+QTLELEKEF FN YLTR+RRIE++HAL LTERQ+KIWF
Sbjct: 163 MFPWMRPQGPGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWF 222
Query: 287 QNRRMKWKKEN 297
QNRRMKWKKEN
Sbjct: 223 QNRRMKWKKEN 233
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.133 0.432
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,515,839,074
Number of Sequences: 23463169
Number of extensions: 332544481
Number of successful extensions: 3411384
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 25891
Number of HSP's successfully gapped in prelim test: 25988
Number of HSP's that attempted gapping in prelim test: 2481624
Number of HSP's gapped (non-prelim): 486994
length of query: 317
length of database: 8,064,228,071
effective HSP length: 142
effective length of query: 175
effective length of database: 9,027,425,369
effective search space: 1579799439575
effective search space used: 1579799439575
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 76 (33.9 bits)