Your job contains 1 sequence.
>psy3281
MSSYFANSYMPDIKNGGVLPPEHHQQHHYGATVLPQNNGVEDPSMYDPRQVHHYGQVPNN
GQPVHGMPYPRFPPYDRMDIRNAAYYGAHEGGMEQYPRPDSPSMGHMGPQNGHQTPVVYA
SCKLQAAVGNGIIPGPESPNDLVDPTLNNHHHHQHHHMNHHPHPHPQQQQPQQPPPQHMM
YAQQPPPQHHQVVVNHQQTPPNQPPSQPPNQPPNQQPNNTSASLPSPLYPWMRSQFERKR
GRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSK
DGGSDAGSDITPATSPQ
The BLAST search returned 10 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy3281
(317 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0260642 - symbol:Antp "Antennapedia" species:7227 ... 435 2.6e-63 3
UNIPROTKB|Q24645 - symbol:Antp "Homeotic protein antennap... 435 3.4e-63 3
UNIPROTKB|E2QT43 - symbol:HOXB5 "Uncharacterized protein"... 318 5.0e-35 3
UNIPROTKB|P09067 - symbol:HOXB5 "Homeobox protein Hox-B5"... 318 5.0e-35 3
UNIPROTKB|F1RWG0 - symbol:HOXB5 "Uncharacterized protein"... 318 5.0e-35 3
MGI|MGI:96186 - symbol:Hoxb5 "homeobox B5" species:10090 ... 318 5.0e-35 3
RGD|1562292 - symbol:Hoxb5 "homeo box B5" species:10116 "... 318 5.0e-35 3
UNIPROTKB|E2QT33 - symbol:HOXB7 "Uncharacterized protein"... 372 2.8e-34 1
UNIPROTKB|E2RQ19 - symbol:HOXB8 "Uncharacterized protein"... 317 3.4e-34 2
UNIPROTKB|I3L3R1 - symbol:HOXB8 "Homeobox B8, isoform CRA... 317 3.4e-34 2
UNIPROTKB|F1RWG3 - symbol:HOXB8 "Homeobox protein Hox-B8"... 317 3.4e-34 2
ZFIN|ZDB-GENE-990415-106 - symbol:hoxb6a "homeo box B6a" ... 336 5.6e-34 2
UNIPROTKB|P17481 - symbol:HOXB8 "Homeobox protein Hox-B8"... 315 5.6e-34 2
MGI|MGI:96189 - symbol:Hoxb8 "homeobox B8" species:10090 ... 315 5.6e-34 2
UNIPROTKB|G3V6Y1 - symbol:Hoxb8 "Homeo box B8 (Mapped)" s... 315 5.6e-34 2
RGD|1559918 - symbol:Hoxb7 "homeo box B7" species:10116 "... 369 5.8e-34 1
UNIPROTKB|F6UVS6 - symbol:HOXB7 "Uncharacterized protein"... 368 7.4e-34 1
UNIPROTKB|F1NLW0 - symbol:LOC100858514 "Uncharacterized p... 367 9.5e-34 1
UNIPROTKB|Q90VZ9 - symbol:HOXA7 "Homeobox protein Hox-A7"... 367 9.5e-34 1
ZFIN|ZDB-GENE-000329-2 - symbol:hoxb7a "homeo box B7a" sp... 367 9.5e-34 1
UNIPROTKB|E1B8D8 - symbol:HOXA7 "Uncharacterized protein"... 366 1.2e-33 1
UNIPROTKB|Q9TT89 - symbol:HOXB7 "Homeobox protein Hox-B7"... 366 1.2e-33 1
UNIPROTKB|F1N1K1 - symbol:HOXB7 "Homeobox protein Hox-B7"... 364 2.0e-33 1
MGI|MGI:96179 - symbol:Hoxa7 "homeobox A7" species:10090 ... 364 2.0e-33 1
ZFIN|ZDB-GENE-990415-108 - symbol:hoxb8a "homeo box B8a" ... 315 2.4e-33 2
UNIPROTKB|Q6B3N0 - symbol:HOXA5 "Homeobox protein Hox-A5"... 319 3.8e-33 2
UNIPROTKB|P09629 - symbol:HOXB7 "Homeobox protein Hox-B7"... 361 4.1e-33 1
MGI|MGI:96188 - symbol:Hoxb7 "homeobox B7" species:10090 ... 361 4.1e-33 1
UNIPROTKB|E2QT40 - symbol:HOXB6 "Uncharacterized protein"... 329 4.9e-33 2
UNIPROTKB|F6UVZ9 - symbol:HOXB6 "Uncharacterized protein"... 329 4.9e-33 2
UNIPROTKB|F1RWG1 - symbol:HOXB6 "Uncharacterized protein"... 329 4.9e-33 2
MGI|MGI:96187 - symbol:Hoxb6 "homeobox B6" species:10090 ... 329 4.9e-33 2
RGD|1562142 - symbol:Hoxb6 "homeo box B6" species:10116 "... 329 4.9e-33 2
UNIPROTKB|E2R5U1 - symbol:HOXA7 "Uncharacterized protein"... 360 5.2e-33 1
UNIPROTKB|P20719 - symbol:HOXA5 "Homeobox protein Hox-A5"... 316 6.2e-33 2
UNIPROTKB|F1RWG2 - symbol:HOXB7 "Uncharacterized protein"... 359 6.7e-33 1
UNIPROTKB|H9L183 - symbol:HOXB7 "Uncharacterized protein"... 336 7.9e-33 2
UNIPROTKB|P17509 - symbol:HOXB6 "Homeobox protein Hox-B6"... 329 7.9e-33 2
UNIPROTKB|Q2HJ67 - symbol:HOXA5 "Homeobox protein Hox-A5"... 316 7.9e-33 2
UNIPROTKB|E2R5W8 - symbol:HOXA5 "Uncharacterized protein"... 316 7.9e-33 2
UNIPROTKB|E1U314 - symbol:Hoxa5 "Uncharacterized protein"... 316 7.9e-33 2
MGI|MGI:96177 - symbol:Hoxa5 "homeobox A5" species:10090 ... 316 7.9e-33 2
RGD|6492497 - symbol:LOC100911546 "homeobox protein Hox-A... 316 7.9e-33 2
RGD|6502805 - symbol:LOC100909641 "homeobox protein Hox-A... 316 7.9e-33 2
UNIPROTKB|F1NMY3 - symbol:HOXB8 "Homeobox protein Hox-B8"... 318 1.0e-32 2
UNIPROTKB|P31268 - symbol:HOXA7 "Homeobox protein Hox-A7"... 357 1.1e-32 1
UNIPROTKB|E1B7T2 - symbol:LOC100848736 "Uncharacterized p... 336 1.3e-32 2
UNIPROTKB|F1SHT4 - symbol:HOXA7 "Uncharacterized protein"... 356 1.4e-32 1
UNIPROTKB|I3LKE3 - symbol:HOXA7 "Uncharacterized protein"... 356 1.4e-32 1
UNIPROTKB|Q5YLH5 - symbol:HOXA6 "Homeobox protein Hox-A6"... 335 1.6e-32 2
UNIPROTKB|E2R5W2 - symbol:HOXA6 "Uncharacterized protein"... 335 1.6e-32 2
UNIPROTKB|F1SHT3 - symbol:HOXA6 "Uncharacterized protein"... 335 1.6e-32 2
MGI|MGI:96178 - symbol:Hoxa6 "homeobox A6" species:10090 ... 334 2.1e-32 2
RGD|1590236 - symbol:Hoxa6 "homeobox A6" species:10116 "R... 334 2.1e-32 2
ZFIN|ZDB-GENE-000823-7 - symbol:hoxb6b "homeo box B6b" sp... 326 2.1e-32 2
UNIPROTKB|P31267 - symbol:HOXA6 "Homeobox protein Hox-A6"... 333 2.6e-32 2
ZFIN|ZDB-GENE-980526-70 - symbol:hoxb5a "homeo box B5a" s... 318 2.6e-32 2
ZFIN|ZDB-GENE-990415-114 - symbol:hoxc8a "homeo box C8a" ... 309 2.6e-32 2
UNIPROTKB|E9PT77 - symbol:LOC100360577 "Protein LOC100360... 280 2.6e-32 2
MGI|MGI:96176 - symbol:Hoxa4 "homeobox A4" species:10090 ... 285 3.4e-32 2
UNIPROTKB|Q9YH13 - symbol:HOXC8 "Homeobox protein Hox-C8"... 306 4.3e-32 2
ZFIN|ZDB-GENE-000823-9 - symbol:hoxa5a "homeo box A5a" sp... 314 6.9e-32 2
UNIPROTKB|E1BZJ6 - symbol:HOXB5 "Homeobox protein Hox-B5"... 310 1.4e-31 2
UNIPROTKB|E1BI54 - symbol:HOXC8 "Uncharacterized protein"... 306 1.8e-31 2
MGI|MGI:96198 - symbol:Hoxc8 "homeobox C8" species:10090 ... 306 1.8e-31 2
RGD|2821 - symbol:Hoxc8 "homeobox C8" species:10116 "Ratt... 306 1.8e-31 2
ZFIN|ZDB-GENE-000823-6 - symbol:hoxb5b "homeo box B5b" sp... 312 2.3e-31 2
UNIPROTKB|G3MYX4 - symbol:G3MYX4 "Uncharacterized protein... 282 2.7e-31 3
ZFIN|ZDB-GENE-980526-291 - symbol:hoxb8b "homeo box B8b" ... 312 3.0e-31 2
UNIPROTKB|P31273 - symbol:HOXC8 "Homeobox protein Hox-C8"... 306 3.0e-31 2
UNIPROTKB|E2QRS0 - symbol:HOXC8 "Uncharacterized protein"... 306 3.8e-31 2
UNIPROTKB|P13378 - symbol:HOXD8 "Homeobox protein Hox-D8"... 317 6.1e-31 2
UNIPROTKB|E1BQ67 - symbol:HOXB5 "Homeobox protein Hox-B5"... 303 7.7e-31 2
UNIPROTKB|P17277 - symbol:HOXA4 "Homeobox protein Hox-A4"... 283 1.3e-30 2
UNIPROTKB|H9KZ47 - symbol:HOXB7 "Uncharacterized protein"... 336 1.8e-30 1
ZFIN|ZDB-GENE-990415-113 - symbol:hoxc6a "homeo box C6a" ... 305 3.3e-30 2
UNIPROTKB|A7MBD6 - symbol:HOXD4 "Uncharacterized protein"... 298 6.8e-30 2
RGD|1309690 - symbol:Hoxd4 "homeo box D4" species:10116 "... 298 6.8e-30 2
UNIPROTKB|F1NMG4 - symbol:LOC100858374 "Uncharacterized p... 283 6.8e-30 2
UNIPROTKB|J9P833 - symbol:HOXC5 "Uncharacterized protein"... 305 1.1e-29 2
UNIPROTKB|Q00444 - symbol:HOXC5 "Homeobox protein Hox-C5"... 305 1.1e-29 2
UNIPROTKB|G3MXN5 - symbol:HOXA4 "Uncharacterized protein"... 288 1.1e-29 2
UNIPROTKB|F1MJX6 - symbol:HOXA4 "Uncharacterized protein"... 288 1.1e-29 2
MGI|MGI:96208 - symbol:Hoxd4 "homeobox D4" species:10090 ... 300 1.4e-29 2
UNIPROTKB|F1SHT2 - symbol:HOXA4 "Uncharacterized protein"... 282 1.4e-29 2
UNIPROTKB|I3LRP3 - symbol:LOC100627840 "Uncharacterized p... 305 1.8e-29 2
MGI|MGI:96196 - symbol:Hoxc5 "homeobox C5" species:10090 ... 305 1.8e-29 2
RGD|1307584 - symbol:Hoxc5 "homeo box C5" species:10116 "... 305 1.8e-29 2
UNIPROTKB|P09016 - symbol:HOXD4 "Homeobox protein Hox-D4"... 295 3.7e-29 2
UNIPROTKB|F1NZJ3 - symbol:HOXD4 "Homeobox protein Hox-D4"... 292 3.7e-29 2
UNIPROTKB|F1NMG1 - symbol:F1NMG1 "Uncharacterized protein... 323 4.4e-29 1
UNIPROTKB|P17278 - symbol:HOXD4 "Homeobox protein Hox-D4"... 292 4.7e-29 2
UNIPROTKB|E1BHR6 - symbol:HOXC5 "Uncharacterized protein"... 300 5.9e-29 2
ZFIN|ZDB-GENE-980526-214 - symbol:hoxd4a "homeo box D4a" ... 288 5.9e-29 2
UNIPROTKB|F1PZZ7 - symbol:HOXA4 "Uncharacterized protein"... 280 5.9e-29 2
UNIPROTKB|Q8T940 - symbol:Ubx "Homeotic protein ultrabith... 297 7.6e-29 2
RGD|1587253 - symbol:Hoxa7 "homeobox A7" species:10116 "R... 319 1.2e-28 1
UNIPROTKB|P09634 - symbol:Hoxa7 "Homeobox protein Hox-A7"... 319 1.2e-28 1
UNIPROTKB|Q00056 - symbol:HOXA4 "Homeobox protein Hox-A4"... 280 1.2e-28 2
UNIPROTKB|P14839 - symbol:HOXB6 "Homeobox protein Hox-B6"... 318 1.5e-28 1
WARNING: Descriptions of 1317 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0260642 [details] [associations]
symbol:Antp "Antennapedia" species:7227 "Drosophila
melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0007384
"specification of segmental identity, thorax" evidence=IMP]
[GO:0009948 "anterior/posterior axis specification" evidence=IMP]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=NAS] [GO:0007494 "midgut development" evidence=TAS]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=NAS] [GO:0007379 "segment specification"
evidence=NAS] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0007507 "heart development"
evidence=IEP] [GO:0007383 "specification of segmental identity,
antennal segment" evidence=IMP] [GO:0048542 "lymph gland
development" evidence=IMP] [GO:0014019 "neuroblast development"
evidence=IMP] [GO:0042694 "muscle cell fate specification"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 EMBL:AE014297 GO:GO:0005634
GO:GO:0005737 GO:GO:0007507 GO:GO:0042694 GO:GO:0043565
GO:GO:0045944 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 KO:K09311
GO:GO:0003705 GO:GO:0007494 GO:GO:0014019 EMBL:AE001572 EMBL:X03790
EMBL:X03791 EMBL:M20704 EMBL:M20705 EMBL:AY060407 EMBL:M14496
EMBL:K01948 EMBL:M12009 PIR:A23450 RefSeq:NP_996167.1
RefSeq:NP_996168.1 RefSeq:NP_996170.1 RefSeq:NP_996175.1
RefSeq:NP_996176.1 UniGene:Dm.3803 PDB:1AHD PDB:1HOM PDB:1SAN
PDB:2HOA PDB:9ANT PDBsum:1AHD PDBsum:1HOM PDBsum:1SAN PDBsum:2HOA
PDBsum:9ANT ProteinModelPortal:P02833 SMR:P02833 DIP:DIP-51405N
IntAct:P02833 MINT:MINT-763892 STRING:P02833 PRIDE:P02833
EnsemblMetazoa:FBtr0081647 EnsemblMetazoa:FBtr0081652
EnsemblMetazoa:FBtr0081654 EnsemblMetazoa:FBtr0081655 GeneID:40835
KEGG:dme:Dmel_CG1028 CTD:40835 FlyBase:FBgn0260642 eggNOG:NOG238660
HOGENOM:HOG000142851 InParanoid:P02833 OMA:FPPYDRM
OrthoDB:EOG43XSKG PhylomeDB:P02833 EvolutionaryTrace:P02833
GenomeRNAi:40835 NextBio:820851 Bgee:P02833 GermOnline:CG1028
GO:GO:0009948 GO:GO:0048542 GO:GO:0007383 GO:GO:0007384
Uniprot:P02833
Length = 378
Score = 435 (158.2 bits), Expect = 2.6e-63, Sum P(3) = 2.6e-63
Identities = 84/103 (81%), Positives = 88/103 (85%)
Query: 221 SASLPSPLYPWMRSQF----ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALC 276
S+ +PSPLYPWMRSQF ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALC
Sbjct: 276 SSGMPSPLYPWMRSQFGKCQERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALC 335
Query: 277 LTERQIKIWFQNRRMKWKKENKSKD--GGSDAGSDITPATSPQ 317
LTERQIKIWFQNRRMKWKKENK+K G G +ITP SPQ
Sbjct: 336 LTERQIKIWFQNRRMKWKKENKTKGEPGSGGEGDEITPPNSPQ 378
Score = 139 (54.0 bits), Expect = 2.6e-63, Sum P(3) = 2.6e-63
Identities = 36/76 (47%), Positives = 41/76 (53%)
Query: 38 NGVEDPSMYDPRQVHHYGQVPNNGQPVHGMPYPRFPPYDRMDIRNAAYYGAHEGGMEQ-Y 96
NGV D D +Q+HHY Q N MPYPRFPPYDRM N G + Q Y
Sbjct: 32 NGVTD---LDAQQMHHYSQ---NANHQGNMPYPRFPPYDRMPYYNGQ--GMDQQQQHQVY 83
Query: 97 PRPDSPS--MGHMGPQ 110
RPDSPS +G + PQ
Sbjct: 84 SRPDSPSSQVGGVMPQ 99
Score = 102 (41.0 bits), Expect = 2.6e-63, Sum P(3) = 2.6e-63
Identities = 24/37 (64%), Positives = 26/37 (70%)
Query: 109 PQNGHQTPVVYASCKLQAAVGN-GIIPGPESPNDLVD 144
PQ Q PVVYASCKLQAAVG G++P SP LVD
Sbjct: 149 PQQQQQQPVVYASCKLQAAVGGLGMVPEGGSP-PLVD 184
Score = 102 (41.0 bits), Expect = 2.0e-59, Sum P(3) = 2.0e-59
Identities = 29/68 (42%), Positives = 32/68 (47%)
Query: 53 HYGQVPNNG------QPVH----------GMPYPRFPPYDRMDIRNAAYYGAHEGGMEQ- 95
H+G P NG Q +H MPYPRFPPYDRM N G + Q
Sbjct: 25 HHGHYPGNGVTDLDAQQMHHYSQNANHQGNMPYPRFPPYDRMPYYNGQ--GMDQQQQHQV 82
Query: 96 YPRPDSPS 103
Y RPDSPS
Sbjct: 83 YSRPDSPS 90
Score = 48 (22.0 bits), Expect = 2.9e-44, Sum P(2) = 2.9e-44
Identities = 23/67 (34%), Positives = 29/67 (43%)
Query: 22 EHHQQHHYGATVLPQNNGVED----PS--MYD---PRQVH--HYGQ-VPNNGQP---VHG 66
E HQ HH + Q +GV P M+ P Q+H H GQ P + P G
Sbjct: 220 EVHQNHH-NMGMYQQQSGVPPVGAPPQGMMHQGQGPPQMHQGHPGQHTPPSQNPNSQSSG 278
Query: 67 MPYPRFP 73
MP P +P
Sbjct: 279 MPSPLYP 285
Score = 40 (19.1 bits), Expect = 2.0e-43, Sum P(2) = 2.0e-43
Identities = 10/29 (34%), Positives = 12/29 (41%)
Query: 20 PPEHHQQHHYGATVLPQNNGVEDPSMYDP 48
PP+ HQ H T QN + M P
Sbjct: 254 PPQMHQGHPGQHTPPSQNPNSQSSGMPSP 282
>UNIPROTKB|Q24645 [details] [associations]
symbol:Antp "Homeotic protein antennapedia" species:7241
"Drosophila subobscura" [GO:0003677 "DNA binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0007384 "specification of
segmental identity, thorax" evidence=ISS] [GO:0009948
"anterior/posterior axis specification" evidence=ISS]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0003677 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0009948 GO:GO:0007384 EMBL:X60995 EMBL:X62246 PIR:S26492
ProteinModelPortal:Q24645 SMR:Q24645 FlyBase:FBgn0012932
Uniprot:Q24645
Length = 394
Score = 435 (158.2 bits), Expect = 3.4e-63, Sum P(3) = 3.4e-63
Identities = 84/103 (81%), Positives = 88/103 (85%)
Query: 221 SASLPSPLYPWMRSQF----ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALC 276
S+ +PSPLYPWMRSQF ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALC
Sbjct: 292 SSGMPSPLYPWMRSQFGKCQERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALC 351
Query: 277 LTERQIKIWFQNRRMKWKKENKSKD--GGSDAGSDITPATSPQ 317
LTERQIKIWFQNRRMKWKKENK+K G G +ITP SPQ
Sbjct: 352 LTERQIKIWFQNRRMKWKKENKTKGEPGSGGEGDEITPPNSPQ 394
Score = 149 (57.5 bits), Expect = 3.4e-63, Sum P(3) = 3.4e-63
Identities = 35/75 (46%), Positives = 42/75 (56%)
Query: 38 NGVEDPSMYDPRQVHHYGQVPNNGQPVHGMPYPRFPPYDRMDIRNAAYYGAHEGGMEQYP 97
NGV D D +Q+HHY Q PN+ MPYPRFPPYDRM N + + Y
Sbjct: 32 NGVTD---LDAQQMHHYSQNPNHQG---NMPYPRFPPYDRMPYYNGQGMDQQQQQHQGYS 85
Query: 98 RPDSPS--MGHMGPQ 110
RPDSPS +G + PQ
Sbjct: 86 RPDSPSSQVGGVMPQ 100
Score = 91 (37.1 bits), Expect = 3.4e-63, Sum P(3) = 3.4e-63
Identities = 23/37 (62%), Positives = 25/37 (67%)
Query: 110 QNGHQTPVVYASCKLQAAVGNGI--IPGPESPNDLVD 144
Q Q PVVYASCKLQAAVG G+ +P SP LVD
Sbjct: 163 QQQQQQPVVYASCKLQAAVGVGLGMVPEGGSP-PLVD 198
Score = 77 (32.2 bits), Expect = 1.1e-55, Sum P(3) = 1.1e-55
Identities = 29/82 (35%), Positives = 37/82 (45%)
Query: 1 MSSYFANSYM-PDIKNG-----GVLPPEHHQQHHYGATVLPQNNGVEDPSM--YDPRQVH 52
M+SYF NSYM D+ +G GV + Q HHY Q N + P YD R +
Sbjct: 11 MTSYFTNSYMGADMHHGHYPGNGVTDLDAQQMHHYSQNPNHQGN-MPYPRFPPYD-RMPY 68
Query: 53 HYGQVPNNGQPVH-GMPYPRFP 73
+ GQ + Q H G P P
Sbjct: 69 YNGQGMDQQQQQHQGYSRPDSP 90
Score = 58 (25.5 bits), Expect = 2.6e-45, Sum P(2) = 2.6e-45
Identities = 18/53 (33%), Positives = 21/53 (39%)
Query: 22 EHHQQHHYGATVLPQNNGVEDPSMYDPRQVHHYGQVPNNGQPVHGMPYPRFPP 74
E HQ HH Q GV P P+ + H GQ P H +P PP
Sbjct: 234 EVHQNHHNMGMYGQQQTGVP-PVGAPPQAMMHQGQGPPQMHQGH-LPGQHTPP 284
Score = 42 (19.8 bits), Expect = 1.2e-43, Sum P(2) = 1.2e-43
Identities = 11/30 (36%), Positives = 13/30 (43%)
Query: 20 PPEHHQQHHYGATVLP-QNNGVEDPSMYDP 48
PP+ HQ H G P QN + M P
Sbjct: 269 PPQMHQGHLPGQHTPPSQNPNSQSSGMPSP 298
Score = 38 (18.4 bits), Expect = 1.4e-51, Sum P(3) = 1.4e-51
Identities = 11/45 (24%), Positives = 17/45 (37%)
Query: 13 IKNGGVLPPEHHQQHHYGATVLPQNNGVEDPSMYDPRQVHHYGQV 57
+ GG L + QQ + PQ + P +Q+ QV
Sbjct: 106 LPTGGQLVAQQQQQQPQQQSQTPQQQQAQQPQQQQ-QQLQQLPQV 149
>UNIPROTKB|E2QT43 [details] [associations]
symbol:HOXB5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA] [GO:0045446
"endothelial cell differentiation" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048704 GO:GO:0045446
GeneTree:ENSGT00700000104189 KO:K09305 OMA:APQIFPW CTD:3215
EMBL:AAEX03006516 RefSeq:XP_003435305.1 SMR:E2QT43
Ensembl:ENSCAFT00000026675 GeneID:100686000 KEGG:cfa:100686000
Uniprot:E2QT43
Length = 269
Score = 318 (117.0 bits), Expect = 5.0e-35, Sum P(3) = 5.0e-35
Identities = 68/106 (64%), Positives = 76/106 (71%)
Query: 220 TSASLP---SP-LYPWMRSQF--------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRR 267
TS + P +P ++PWMR + KR R YTRYQTLELEKEFHFNRYLTRRR
Sbjct: 164 TSTAAPEGQTPQIFPWMRKLHISHDMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRR 223
Query: 268 RIEIAHALCLTERQIKIWFQNRRMKWKKENKSKDGG-SDAGSDITP 312
RIEIAHALCL+ERQIKIWFQNRRMKWKK+NK K + AGS P
Sbjct: 224 RIEIAHALCLSERQIKIWFQNRRMKWKKDNKLKSMSLATAGSAFQP 269
Score = 46 (21.3 bits), Expect = 5.0e-35, Sum P(3) = 5.0e-35
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 1 MSSYFANSYMPDIKNGGVLPPEHHQQHHYGA 31
MSSYF NS+ NG P++ Q +YG+
Sbjct: 1 MSSYFVNSFSGRYPNG----PDY-QLLNYGS 26
Score = 41 (19.5 bits), Expect = 5.0e-35, Sum P(3) = 5.0e-35
Identities = 13/55 (23%), Positives = 21/55 (38%)
Query: 86 YGAHEGGMEQYPRPDSPSMGHMGP--QNGHQTPVVYASCKLQAAVGNGIIPGPES 138
YG + GM+ S S H G ++ P + + A + + PES
Sbjct: 45 YGYNYNGMDLSVNRSSASSSHFGAVGESSRAFPAPAQEPRFRQAASSCSLSSPES 99
>UNIPROTKB|P09067 [details] [associations]
symbol:HOXB5 "Homeobox protein Hox-B5" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0045446 "endothelial cell
differentiation" evidence=IEA] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0009653 "anatomical structure morphogenesis"
evidence=TAS] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0009653
GO:GO:0048704 GO:GO:0045446 HOVERGEN:HBG016849 eggNOG:NOG236516
HOGENOM:HOG000231178 KO:K09305 PIR:A24777 EMBL:AF287967 OMA:APQIFPW
OrthoDB:EOG45MN66 EMBL:M92299 EMBL:AK314964 EMBL:BC117247
EMBL:X03794 EMBL:K02572 EMBL:M86726 IPI:IPI00012514 PIR:A45578
RefSeq:NP_002138.1 UniGene:Hs.654456 ProteinModelPortal:P09067
SMR:P09067 IntAct:P09067 STRING:P09067 PhosphoSite:P09067
DMDM:400000 PRIDE:P09067 Ensembl:ENST00000239151 GeneID:3215
KEGG:hsa:3215 UCSC:uc002inr.3 CTD:3215 GeneCards:GC17M046668
HGNC:HGNC:5116 MIM:142960 neXtProt:NX_P09067 PharmGKB:PA29392
InParanoid:P09067 PhylomeDB:P09067 GenomeRNAi:3215 NextBio:12792
Bgee:P09067 CleanEx:HS_HOXB5 Genevestigator:P09067
GermOnline:ENSG00000120075 Uniprot:P09067
Length = 269
Score = 318 (117.0 bits), Expect = 5.0e-35, Sum P(3) = 5.0e-35
Identities = 68/106 (64%), Positives = 76/106 (71%)
Query: 220 TSASLP---SP-LYPWMRSQF--------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRR 267
TS + P +P ++PWMR + KR R YTRYQTLELEKEFHFNRYLTRRR
Sbjct: 164 TSTAAPEGQTPQIFPWMRKLHISHDMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRR 223
Query: 268 RIEIAHALCLTERQIKIWFQNRRMKWKKENKSKDGG-SDAGSDITP 312
RIEIAHALCL+ERQIKIWFQNRRMKWKK+NK K + AGS P
Sbjct: 224 RIEIAHALCLSERQIKIWFQNRRMKWKKDNKLKSMSLATAGSAFQP 269
Score = 46 (21.3 bits), Expect = 5.0e-35, Sum P(3) = 5.0e-35
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 1 MSSYFANSYMPDIKNGGVLPPEHHQQHHYGA 31
MSSYF NS+ NG P++ Q +YG+
Sbjct: 1 MSSYFVNSFSGRYPNG----PDY-QLLNYGS 26
Score = 41 (19.5 bits), Expect = 5.0e-35, Sum P(3) = 5.0e-35
Identities = 13/55 (23%), Positives = 21/55 (38%)
Query: 86 YGAHEGGMEQYPRPDSPSMGHMGP--QNGHQTPVVYASCKLQAAVGNGIIPGPES 138
YG + GM+ S S H G ++ P + + A + + PES
Sbjct: 45 YGYNYNGMDLSVNRSSASSSHFGAVGESSRAFPAPAQEPRFRQAASSCSLSSPES 99
>UNIPROTKB|F1RWG0 [details] [associations]
symbol:HOXB5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0045446
"endothelial cell differentiation" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048704 GO:GO:0045446
GeneTree:ENSGT00700000104189 KO:K09305 OMA:APQIFPW EMBL:CU856160
RefSeq:XP_003131598.1 ProteinModelPortal:F1RWG0 SMR:F1RWG0
Ensembl:ENSSSCT00000019094 GeneID:100522700 KEGG:ssc:100522700
Uniprot:F1RWG0
Length = 269
Score = 318 (117.0 bits), Expect = 5.0e-35, Sum P(3) = 5.0e-35
Identities = 68/106 (64%), Positives = 76/106 (71%)
Query: 220 TSASLP---SP-LYPWMRSQF--------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRR 267
TS + P +P ++PWMR + KR R YTRYQTLELEKEFHFNRYLTRRR
Sbjct: 164 TSTAAPEGQTPQIFPWMRKLHISHDMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRR 223
Query: 268 RIEIAHALCLTERQIKIWFQNRRMKWKKENKSKDGG-SDAGSDITP 312
RIEIAHALCL+ERQIKIWFQNRRMKWKK+NK K + AGS P
Sbjct: 224 RIEIAHALCLSERQIKIWFQNRRMKWKKDNKLKSMSLATAGSAFQP 269
Score = 46 (21.3 bits), Expect = 5.0e-35, Sum P(3) = 5.0e-35
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 1 MSSYFANSYMPDIKNGGVLPPEHHQQHHYGA 31
MSSYF NS+ NG P++ Q +YG+
Sbjct: 1 MSSYFVNSFSGRYPNG----PDY-QLLNYGS 26
Score = 41 (19.5 bits), Expect = 5.0e-35, Sum P(3) = 5.0e-35
Identities = 13/55 (23%), Positives = 21/55 (38%)
Query: 86 YGAHEGGMEQYPRPDSPSMGHMGP--QNGHQTPVVYASCKLQAAVGNGIIPGPES 138
YG + GM+ S S H G ++ P + + A + + PES
Sbjct: 45 YGYNYNGMDLSVNRSSASSSHFGAVGESSRAFPAPAQEPRFRQAASSCSLSSPES 99
>MGI|MGI:96186 [details] [associations]
symbol:Hoxb5 "homeobox B5" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IGI;IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045446 "endothelial cell differentiation"
evidence=IDA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IGI;IMP] [GO:0048706 "embryonic skeletal system
development" evidence=IGI] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 MGI:MGI:96186 GO:GO:0005634
GO:GO:0009952 GO:GO:0003677 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0048704 GO:GO:0045446
GeneTree:ENSGT00700000104189 HOVERGEN:HBG016849 eggNOG:NOG236516
HOGENOM:HOG000231178 KO:K09305 OMA:APQIFPW OrthoDB:EOG45MN66
CTD:3215 EMBL:M26283 EMBL:AK133512 EMBL:BC103595 EMBL:BC103596
EMBL:BC103604 EMBL:BC103607 EMBL:L36070 EMBL:X03033 IPI:IPI00132538
PIR:A43551 PIR:B24777 RefSeq:NP_032294.2 UniGene:Mm.207
ProteinModelPortal:P09079 SMR:P09079 STRING:P09079
PhosphoSite:P09079 PRIDE:P09079 Ensembl:ENSMUST00000049272
GeneID:15413 KEGG:mmu:15413 InParanoid:P09079 NextBio:288138
Bgee:P09079 CleanEx:MM_HOXB5 Genevestigator:P09079
GermOnline:ENSMUSG00000038700 Uniprot:P09079
Length = 269
Score = 318 (117.0 bits), Expect = 5.0e-35, Sum P(3) = 5.0e-35
Identities = 68/106 (64%), Positives = 76/106 (71%)
Query: 220 TSASLP---SP-LYPWMRSQF--------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRR 267
TS + P +P ++PWMR + KR R YTRYQTLELEKEFHFNRYLTRRR
Sbjct: 164 TSTAAPEGQTPQIFPWMRKLHISHDMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRR 223
Query: 268 RIEIAHALCLTERQIKIWFQNRRMKWKKENKSKDGG-SDAGSDITP 312
RIEIAHALCL+ERQIKIWFQNRRMKWKK+NK K + AGS P
Sbjct: 224 RIEIAHALCLSERQIKIWFQNRRMKWKKDNKLKSMSLATAGSAFQP 269
Score = 46 (21.3 bits), Expect = 5.0e-35, Sum P(3) = 5.0e-35
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 1 MSSYFANSYMPDIKNGGVLPPEHHQQHHYGA 31
MSSYF NS+ NG P++ Q +YG+
Sbjct: 1 MSSYFVNSFSGRYPNG----PDY-QLLNYGS 26
Score = 41 (19.5 bits), Expect = 5.0e-35, Sum P(3) = 5.0e-35
Identities = 13/55 (23%), Positives = 21/55 (38%)
Query: 86 YGAHEGGMEQYPRPDSPSMGHMGP--QNGHQTPVVYASCKLQAAVGNGIIPGPES 138
YG + GM+ S S H G ++ P + + A + + PES
Sbjct: 45 YGYNYNGMDLSVNRSSASSSHFGAVGESSRAFPASAQEPRFRQATSSCSLSSPES 99
>RGD|1562292 [details] [associations]
symbol:Hoxb5 "homeo box B5" species:10116 "Rattus norvegicus"
[GO:0003677 "DNA binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0045446 "endothelial cell
differentiation" evidence=IEA;ISO] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA;ISO] [GO:0048706 "embryonic
skeletal system development" evidence=ISO] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1562292
GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0048704 EMBL:CH473948 GO:GO:0045446
GeneTree:ENSGT00700000104189 KO:K09305 OMA:APQIFPW
OrthoDB:EOG45MN66 CTD:3215 IPI:IPI00368860 RefSeq:NP_001178854.1
UniGene:Rn.229521 SMR:D3ZMA1 Ensembl:ENSRNOT00000010724
GeneID:497987 KEGG:rno:497987 UCSC:RGD:1562292 NextBio:698308
Uniprot:D3ZMA1
Length = 269
Score = 318 (117.0 bits), Expect = 5.0e-35, Sum P(3) = 5.0e-35
Identities = 68/106 (64%), Positives = 76/106 (71%)
Query: 220 TSASLP---SP-LYPWMRSQF--------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRR 267
TS + P +P ++PWMR + KR R YTRYQTLELEKEFHFNRYLTRRR
Sbjct: 164 TSTAAPEGQTPQIFPWMRKLHISHDMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRR 223
Query: 268 RIEIAHALCLTERQIKIWFQNRRMKWKKENKSKDGG-SDAGSDITP 312
RIEIAHALCL+ERQIKIWFQNRRMKWKK+NK K + AGS P
Sbjct: 224 RIEIAHALCLSERQIKIWFQNRRMKWKKDNKLKSMSLATAGSAFQP 269
Score = 46 (21.3 bits), Expect = 5.0e-35, Sum P(3) = 5.0e-35
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 1 MSSYFANSYMPDIKNGGVLPPEHHQQHHYGA 31
MSSYF NS+ NG P++ Q +YG+
Sbjct: 1 MSSYFVNSFSGRYPNG----PDY-QLLNYGS 26
Score = 41 (19.5 bits), Expect = 5.0e-35, Sum P(3) = 5.0e-35
Identities = 13/55 (23%), Positives = 21/55 (38%)
Query: 86 YGAHEGGMEQYPRPDSPSMGHMGP--QNGHQTPVVYASCKLQAAVGNGIIPGPES 138
YG + GM+ S S H G ++ P + + A + + PES
Sbjct: 45 YGYNYNGMDLSVNRSSASSSHFGAVGESSRAFPASAQEPRFRQATSSCSLSSPES 99
>UNIPROTKB|E2QT33 [details] [associations]
symbol:HOXB7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 Ensembl:ENSCAFT00000026688 Uniprot:E2QT33
Length = 237
Score = 372 (136.0 bits), Expect = 2.8e-34, P = 2.8e-34
Identities = 70/82 (85%), Positives = 74/82 (90%)
Query: 228 LYPWMRSQ-FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWMRS +RKRGRQTYTRYQTLELEKEFH+NRYLTRRRRIEIAHALCLTERQIKIWF
Sbjct: 126 IYPWMRSSGTDRKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWF 185
Query: 287 QNRRMKWKKENKSKDGGSDAGS 308
QNRRMKWKKENKS G+ A S
Sbjct: 186 QNRRMKWKKENKSTGPGATASS 207
>UNIPROTKB|E2RQ19 [details] [associations]
symbol:HOXB8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA] [GO:0021516
"dorsal spinal cord development" evidence=IEA] [GO:0019233 "sensory
perception of pain" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0007625 "grooming behavior"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0019233 GO:GO:0008344 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048704
GO:GO:0000976 GO:GO:0007625 GO:GO:0021516
GeneTree:ENSGT00700000104332 OMA:MERAQEV EMBL:AAEX03006516
Ensembl:ENSCAFT00000026696 NextBio:20863956 Uniprot:E2RQ19
Length = 242
Score = 317 (116.6 bits), Expect = 3.4e-34, Sum P(2) = 3.4e-34
Identities = 63/84 (75%), Positives = 71/84 (84%)
Query: 221 SASLPSP--LYPWMRSQFE-RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 277
S PSP L+PWMR Q R+RGRQTY+RYQTLELEKEF FN YLTR+RRIE++HAL L
Sbjct: 125 SQQSPSPTQLFPWMRPQAAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGL 184
Query: 278 TERQIKIWFQNRRMKWKKENKSKD 301
TERQ+KIWFQNRRMKWKKEN +KD
Sbjct: 185 TERQVKIWFQNRRMKWKKEN-NKD 207
Score = 70 (29.7 bits), Expect = 3.4e-34, Sum P(2) = 3.4e-34
Identities = 39/132 (29%), Positives = 49/132 (37%)
Query: 1 MSSYFANSYMPDIKNGGVLPPEHHQQHHYGATVLPQNNGVEDPSMYDPRQVHHYGQVPNN 60
MSSYF NS K G L P ++ G Q+ G +Y P + Q P+
Sbjct: 1 MSSYFVNSLFSKYKTGESLRPNYYD---CG---FAQDLGGRPTVVYGPSSGGSF-QHPSQ 53
Query: 61 GQPV-HGMPYPRFPPYDRMDIRNAAYYGAHEGGMEQYPRPDSPSMGHMGPQNGHQTPVVY 119
Q HG PY + A + G Y S+ G Q+ V Y
Sbjct: 54 IQEFYHGPSSLSTAPYQQNPCAVACH--GDPGNFYGYDPLQRQSL--FGAQDPDL--VQY 107
Query: 120 ASCKLQAAVGNG 131
A CKL AA G G
Sbjct: 108 ADCKLAAASGLG 119
>UNIPROTKB|I3L3R1 [details] [associations]
symbol:HOXB8 "Homeobox B8, isoform CRA_a" species:9606
"Homo sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 EMBL:CH471109
GO:GO:0000976 EMBL:AC103702 UniGene:Hs.514292 HGNC:HGNC:5119
SMR:I3L3R1 Ensembl:ENST00000576562 Uniprot:I3L3R1
Length = 242
Score = 317 (116.6 bits), Expect = 3.4e-34, Sum P(2) = 3.4e-34
Identities = 63/84 (75%), Positives = 71/84 (84%)
Query: 221 SASLPSP--LYPWMRSQFE-RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 277
S PSP L+PWMR Q R+RGRQTY+RYQTLELEKEF FN YLTR+RRIE++HAL L
Sbjct: 125 SEQSPSPTQLFPWMRPQAAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGL 184
Query: 278 TERQIKIWFQNRRMKWKKENKSKD 301
TERQ+KIWFQNRRMKWKKEN +KD
Sbjct: 185 TERQVKIWFQNRRMKWKKEN-NKD 207
Score = 70 (29.7 bits), Expect = 3.4e-34, Sum P(2) = 3.4e-34
Identities = 39/132 (29%), Positives = 49/132 (37%)
Query: 1 MSSYFANSYMPDIKNGGVLPPEHHQQHHYGATVLPQNNGVEDPSMYDPRQVHHYGQVPNN 60
MSSYF NS K G L P ++ G Q+ G +Y P + Q P+
Sbjct: 1 MSSYFVNSLFSKYKTGESLRPNYYD---CG---FAQDLGGRPTVVYGPSSGGSF-QHPSQ 53
Query: 61 GQPV-HGMPYPRFPPYDRMDIRNAAYYGAHEGGMEQYPRPDSPSMGHMGPQNGHQTPVVY 119
Q HG PY + A + G Y S+ G Q+ V Y
Sbjct: 54 IQEFYHGPSSLSTAPYQQNPCAVACH--GDPGNFYGYDPLQRQSL--FGAQDPDL--VQY 107
Query: 120 ASCKLQAAVGNG 131
A CKL AA G G
Sbjct: 108 ADCKLAAASGLG 119
>UNIPROTKB|F1RWG3 [details] [associations]
symbol:HOXB8 "Homeobox protein Hox-B8" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0021516 "dorsal
spinal cord development" evidence=IEA] [GO:0019233 "sensory
perception of pain" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0007625 "grooming behavior"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0019233 GO:GO:0008344 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048704
GO:GO:0000976 GO:GO:0007625 GO:GO:0021516
GeneTree:ENSGT00700000104332 OMA:MERAQEV EMBL:CU856160
Ensembl:ENSSSCT00000019091 Uniprot:F1RWG3
Length = 253
Score = 317 (116.6 bits), Expect = 3.4e-34, Sum P(2) = 3.4e-34
Identities = 63/84 (75%), Positives = 71/84 (84%)
Query: 221 SASLPSP--LYPWMRSQFE-RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 277
S PSP L+PWMR Q R+RGRQTY+RYQTLELEKEF FN YLTR+RRIE++HAL L
Sbjct: 140 SEQSPSPTQLFPWMRPQAAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGL 199
Query: 278 TERQIKIWFQNRRMKWKKENKSKD 301
TERQ+KIWFQNRRMKWKKEN +KD
Sbjct: 200 TERQVKIWFQNRRMKWKKEN-NKD 222
Score = 70 (29.7 bits), Expect = 3.4e-34, Sum P(2) = 3.4e-34
Identities = 39/132 (29%), Positives = 49/132 (37%)
Query: 1 MSSYFANSYMPDIKNGGVLPPEHHQQHHYGATVLPQNNGVEDPSMYDPRQVHHYGQVPNN 60
MSSYF NS K G L P ++ G Q+ G +Y P + Q P+
Sbjct: 16 MSSYFVNSLFSKYKTGESLRPNYYD---CG---FAQDLGGRPTVVYGPSSGGSF-QHPSQ 68
Query: 61 GQPV-HGMPYPRFPPYDRMDIRNAAYYGAHEGGMEQYPRPDSPSMGHMGPQNGHQTPVVY 119
Q HG PY + A + G Y S+ G Q+ V Y
Sbjct: 69 IQEFYHGPSSLSTAPYQQNPCAVACH--GDPGNFYGYDPLQRQSL--FGAQDPDL--VQY 122
Query: 120 ASCKLQAAVGNG 131
A CKL AA G G
Sbjct: 123 ADCKLAAASGLG 134
>ZFIN|ZDB-GENE-990415-106 [details] [associations]
symbol:hoxb6a "homeo box B6a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-990415-106 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 HOGENOM:HOG000231181
HOVERGEN:HBG016849 KO:K09306 eggNOG:NOG305812 EMBL:AL645782
EMBL:X68248 EMBL:X17267 EMBL:DQ060541 IPI:IPI00512770 PIR:S32563
RefSeq:NP_571194.1 UniGene:Dr.132967 ProteinModelPortal:P15861
SMR:P15861 GeneID:30341 KEGG:dre:30341 CTD:30341 InParanoid:P15861
OrthoDB:EOG4G7C0G NextBio:20806772 ArrayExpress:P15861
Uniprot:P15861
Length = 228
Score = 336 (123.3 bits), Expect = 5.6e-34, Sum P(2) = 5.6e-34
Identities = 68/94 (72%), Positives = 74/94 (78%)
Query: 225 PS-PLYPWMRSQ------FER--KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHAL 275
PS P+YPWM+ F +RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHAL
Sbjct: 128 PSAPVYPWMQRMNSCNGTFGNAGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHAL 187
Query: 276 CLTERQIKIWFQNRRMKWKKENKSKDGGSDAGSD 309
CLTERQIKIWFQNRRMKWKKENK + +G +
Sbjct: 188 CLTERQIKIWFQNRRMKWKKENKLINCSQTSGEE 221
Score = 49 (22.3 bits), Expect = 5.6e-34, Sum P(2) = 5.6e-34
Identities = 22/70 (31%), Positives = 26/70 (37%)
Query: 1 MSSYFANSYMPDIKNGGVLPPEHHQQHHYGATVLPQNNGVEDPSMYDPRQVHHYGQVPNN 60
MSSYF NS P GG Q+ G L ++G DP + HY
Sbjct: 1 MSSYFLNSTFPVTLPGG-------QESFLGQIPL-YSSGYTDP-------LRHYPGAAYG 45
Query: 61 GQPVHGMPYP 70
G V YP
Sbjct: 46 GSSVQEKAYP 55
>UNIPROTKB|P17481 [details] [associations]
symbol:HOXB8 "Homeobox protein Hox-B8" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007625 "grooming
behavior" evidence=IEA] [GO:0008344 "adult locomotory behavior"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0019233 "sensory perception of
pain" evidence=IEA] [GO:0021516 "dorsal spinal cord development"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=NAS] [GO:0005634
"nucleus" evidence=NAS] [GO:0007275 "multicellular organismal
development" evidence=NAS] [GO:0045638 "negative regulation of
myeloid cell differentiation" evidence=ISS] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0009952 GO:GO:0019233 GO:GO:0008344
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 HOGENOM:HOG000231181 GO:GO:0048704
GO:GO:0000976 GO:GO:0007625 GO:GO:0045638 GO:GO:0021516
HOVERGEN:HBG016849 eggNOG:NOG314669 OrthoDB:EOG4H464V EMBL:AY014294
EMBL:AY014293 EMBL:X16173 IPI:IPI00014536 PIR:B37042
RefSeq:NP_076921.1 UniGene:Hs.514292 ProteinModelPortal:P17481
SMR:P17481 STRING:P17481 PhosphoSite:P17481 DMDM:20141506
PRIDE:P17481 DNASU:3218 Ensembl:ENST00000239144 GeneID:3218
KEGG:hsa:3218 UCSC:uc002inw.3 CTD:3218 GeneCards:GC17M046688
HGNC:HGNC:5119 MIM:142963 neXtProt:NX_P17481 PharmGKB:PA29395
InParanoid:P17481 KO:K09308 OMA:MERAQEV GenomeRNAi:3218
NextBio:12804 Bgee:P17481 CleanEx:HS_HOXB8 Genevestigator:P17481
GermOnline:ENSG00000120068 Uniprot:P17481
Length = 243
Score = 315 (115.9 bits), Expect = 5.6e-34, Sum P(2) = 5.6e-34
Identities = 63/85 (74%), Positives = 71/85 (83%)
Query: 221 SASLPSP--LYPWMRSQFE--RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALC 276
S PSP L+PWMR Q R+RGRQTY+RYQTLELEKEF FN YLTR+RRIE++HAL
Sbjct: 125 SEQSPSPTQLFPWMRPQAAAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALG 184
Query: 277 LTERQIKIWFQNRRMKWKKENKSKD 301
LTERQ+KIWFQNRRMKWKKEN +KD
Sbjct: 185 LTERQVKIWFQNRRMKWKKEN-NKD 208
Score = 70 (29.7 bits), Expect = 5.6e-34, Sum P(2) = 5.6e-34
Identities = 39/132 (29%), Positives = 49/132 (37%)
Query: 1 MSSYFANSYMPDIKNGGVLPPEHHQQHHYGATVLPQNNGVEDPSMYDPRQVHHYGQVPNN 60
MSSYF NS K G L P ++ G Q+ G +Y P + Q P+
Sbjct: 1 MSSYFVNSLFSKYKTGESLRPNYYD---CG---FAQDLGGRPTVVYGPSSGGSF-QHPSQ 53
Query: 61 GQPV-HGMPYPRFPPYDRMDIRNAAYYGAHEGGMEQYPRPDSPSMGHMGPQNGHQTPVVY 119
Q HG PY + A + G Y S+ G Q+ V Y
Sbjct: 54 IQEFYHGPSSLSTAPYQQNPCAVACH--GDPGNFYGYDPLQRQSL--FGAQDPDL--VQY 107
Query: 120 ASCKLQAAVGNG 131
A CKL AA G G
Sbjct: 108 ADCKLAAASGLG 119
>MGI|MGI:96189 [details] [associations]
symbol:Hoxb8 "homeobox B8" species:10090 "Mus musculus"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007625 "grooming behavior" evidence=IMP]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0009952
"anterior/posterior pattern specification" evidence=IGI;IMP]
[GO:0019233 "sensory perception of pain" evidence=IMP] [GO:0021516
"dorsal spinal cord development" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045638 "negative
regulation of myeloid cell differentiation" evidence=IDA]
[GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IGI;IMP] [GO:0048705 "skeletal system morphogenesis"
evidence=IGI;IMP] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 MGI:MGI:96189 GO:GO:0005634
GO:GO:0009952 GO:GO:0019233 GO:GO:0008344 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231181 GO:GO:0048704 GO:GO:0000976
GO:GO:0007625 GO:GO:0045638 GO:GO:0021516 HOVERGEN:HBG016849
GeneTree:ENSGT00700000104332 eggNOG:NOG314669 OrthoDB:EOG4H464V
CTD:3218 KO:K09308 OMA:MERAQEV EMBL:X13961 EMBL:X13721 EMBL:M18399
EMBL:X54077 IPI:IPI00108997 PIR:S03712 RefSeq:NP_034591.1
UniGene:Mm.4822 ProteinModelPortal:P09632 SMR:P09632 DIP:DIP-35618N
IntAct:P09632 STRING:P09632 PhosphoSite:P09632 PRIDE:P09632
Ensembl:ENSMUST00000052650 Ensembl:ENSMUST00000168043 GeneID:15416
KEGG:mmu:15416 InParanoid:P09632 NextBio:288150 Bgee:P09632
CleanEx:MM_HOXB8 Genevestigator:P09632
GermOnline:ENSMUSG00000056648 Uniprot:P09632
Length = 243
Score = 315 (115.9 bits), Expect = 5.6e-34, Sum P(2) = 5.6e-34
Identities = 63/85 (74%), Positives = 71/85 (83%)
Query: 221 SASLPSP--LYPWMRSQFE--RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALC 276
S PSP L+PWMR Q R+RGRQTY+RYQTLELEKEF FN YLTR+RRIE++HAL
Sbjct: 125 SEQSPSPTQLFPWMRPQAAAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALG 184
Query: 277 LTERQIKIWFQNRRMKWKKENKSKD 301
LTERQ+KIWFQNRRMKWKKEN +KD
Sbjct: 185 LTERQVKIWFQNRRMKWKKEN-NKD 208
Score = 70 (29.7 bits), Expect = 5.6e-34, Sum P(2) = 5.6e-34
Identities = 39/132 (29%), Positives = 49/132 (37%)
Query: 1 MSSYFANSYMPDIKNGGVLPPEHHQQHHYGATVLPQNNGVEDPSMYDPRQVHHYGQVPNN 60
MSSYF NS K G L P ++ G Q+ G +Y P + Q P+
Sbjct: 1 MSSYFVNSLFSKYKTGESLRPNYYD---CG---FAQDLGGRPTVVYGPSSGGSF-QHPSQ 53
Query: 61 GQPV-HGMPYPRFPPYDRMDIRNAAYYGAHEGGMEQYPRPDSPSMGHMGPQNGHQTPVVY 119
Q HG PY + A + G Y S+ G Q+ V Y
Sbjct: 54 IQEFYHGPSSLSTAPYQQNPCAVACH--GDPGNFYGYDPLQRQSL--FGAQDPDL--VQY 107
Query: 120 ASCKLQAAVGNG 131
A CKL AA G G
Sbjct: 108 ADCKLAAASGLG 119
>UNIPROTKB|G3V6Y1 [details] [associations]
symbol:Hoxb8 "Homeo box B8 (Mapped)" species:10116 "Rattus
norvegicus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007625
"grooming behavior" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0019233 "sensory perception of
pain" evidence=IEA] [GO:0021516 "dorsal spinal cord development"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 RGD:1586211 GO:GO:0007275
GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976 EMBL:CH473948
GeneTree:ENSGT00700000104332 CTD:3218 KO:K09308 OMA:MERAQEV
UniGene:Rn.231433 RefSeq:NP_001178578.1 ProteinModelPortal:G3V6Y1
SMR:G3V6Y1 Ensembl:ENSRNOT00000009986 GeneID:24457 KEGG:rno:24457
NextBio:603373 Uniprot:G3V6Y1
Length = 243
Score = 315 (115.9 bits), Expect = 5.6e-34, Sum P(2) = 5.6e-34
Identities = 63/85 (74%), Positives = 71/85 (83%)
Query: 221 SASLPSP--LYPWMRSQFE--RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALC 276
S PSP L+PWMR Q R+RGRQTY+RYQTLELEKEF FN YLTR+RRIE++HAL
Sbjct: 125 SEQSPSPTQLFPWMRPQAAAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALG 184
Query: 277 LTERQIKIWFQNRRMKWKKENKSKD 301
LTERQ+KIWFQNRRMKWKKEN +KD
Sbjct: 185 LTERQVKIWFQNRRMKWKKEN-NKD 208
Score = 70 (29.7 bits), Expect = 5.6e-34, Sum P(2) = 5.6e-34
Identities = 39/132 (29%), Positives = 49/132 (37%)
Query: 1 MSSYFANSYMPDIKNGGVLPPEHHQQHHYGATVLPQNNGVEDPSMYDPRQVHHYGQVPNN 60
MSSYF NS K G L P ++ G Q+ G +Y P + Q P+
Sbjct: 1 MSSYFVNSLFSKYKTGESLRPNYYD---CG---FAQDLGGRPTVVYGPSSGGSF-QHPSQ 53
Query: 61 GQPV-HGMPYPRFPPYDRMDIRNAAYYGAHEGGMEQYPRPDSPSMGHMGPQNGHQTPVVY 119
Q HG PY + A + G Y S+ G Q+ V Y
Sbjct: 54 IQEFYHGPSSLSTAPYQQNPCAVACH--GDPGNFYGYDPLQRQSL--FGAQDPDL--VQY 107
Query: 120 ASCKLQAAVGNG 131
A CKL AA G G
Sbjct: 108 ADCKLAAASGLG 119
>RGD|1559918 [details] [associations]
symbol:Hoxb7 "homeo box B7" species:10116 "Rattus norvegicus"
[GO:0003677 "DNA binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA;ISO] [GO:0030099 "myeloid cell
differentiation" evidence=IEA;ISO] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IEA;ISO] [GO:0090190 "positive regulation
of branching involved in ureteric bud morphogenesis"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
RGD:1559918 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231181 GeneTree:ENSGT00700000104090
GO:GO:0090190 GO:GO:0048704 eggNOG:NOG238660 GO:GO:0030099
HOVERGEN:HBG016849 KO:K09307 OrthoDB:EOG4W9J4Z CTD:3217 OMA:WMRSSGT
EMBL:BC079340 EMBL:M37566 IPI:IPI00195529 PIR:T10775
RefSeq:NP_001017480.1 UniGene:Rn.113631 ProteinModelPortal:P18864
SMR:P18864 PhosphoSite:P18864 Ensembl:ENSRNOT00000031035
GeneID:497985 KEGG:rno:497985 UCSC:RGD:1559918 InParanoid:P18864
NextBio:698299 Genevestigator:P18864 GermOnline:ENSRNOG00000007611
Uniprot:P18864
Length = 219
Score = 369 (135.0 bits), Expect = 5.8e-34, P = 5.8e-34
Identities = 70/83 (84%), Positives = 74/83 (89%)
Query: 228 LYPWMRSQ-FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWMRS ERKRGRQTYTRYQTLELEKEFH+NRYLTRRRRIEIAHALCLTERQIKIWF
Sbjct: 126 IYPWMRSSGTERKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWF 185
Query: 287 QNRRMKWKKENKSKDGGSDAGSD 309
QNRRMKWKKENK+ G+ G D
Sbjct: 186 QNRRMKWKKENKTSGPGT-TGQD 207
>UNIPROTKB|F6UVS6 [details] [associations]
symbol:HOXB7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
KO:K09307 CTD:3217 OMA:WMRSSGT Ensembl:ENSCAFT00000026688
EMBL:AAEX03006516 RefSeq:XP_851221.1 GeneID:608962 KEGG:cfa:608962
Uniprot:F6UVS6
Length = 217
Score = 368 (134.6 bits), Expect = 7.4e-34, P = 7.4e-34
Identities = 70/83 (84%), Positives = 74/83 (89%)
Query: 228 LYPWMRSQ-FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWMRS +RKRGRQTYTRYQTLELEKEFH+NRYLTRRRRIEIAHALCLTERQIKIWF
Sbjct: 126 IYPWMRSSGTDRKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWF 185
Query: 287 QNRRMKWKKENKSKDGGSDAGSD 309
QNRRMKWKKENKS G+ G D
Sbjct: 186 QNRRMKWKKENKSTGPGA-TGQD 207
>UNIPROTKB|F1NLW0 [details] [associations]
symbol:LOC100858514 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
IPI:IPI00573429 OMA:EHKDEGP EMBL:AADN02000985 EMBL:AADN02000986
Ensembl:ENSGALT00000018013 Uniprot:F1NLW0
Length = 187
Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
Identities = 69/89 (77%), Positives = 77/89 (86%)
Query: 228 LYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWMRS +RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF
Sbjct: 86 IYPWMRSSGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 145
Query: 287 QNRRMKWKKENKSKDGGSDAGSDITPATS 315
QNRRMKWKKE+K + + A ++ T A +
Sbjct: 146 QNRRMKWKKEHKEESSSTPAPNEPTSAAA 174
>UNIPROTKB|Q90VZ9 [details] [associations]
symbol:HOXA7 "Homeobox protein Hox-A7" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231181 eggNOG:NOG238660
HOVERGEN:HBG016849 EMBL:AJ291729 EMBL:AF408695 IPI:IPI00573429
RefSeq:NP_989926.1 RefSeq:XP_003640750.1 RefSeq:XP_003640779.1
UniGene:Gga.5122 ProteinModelPortal:Q90VZ9 SMR:Q90VZ9
GeneID:100858514 GeneID:100858856 GeneID:395290 KEGG:gga:100858514
KEGG:gga:100858856 KEGG:gga:395290 CTD:3204 InParanoid:Q90VZ9
KO:K09307 OrthoDB:EOG4W9J4Z NextBio:20815375 Uniprot:Q90VZ9
Length = 219
Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
Identities = 69/89 (77%), Positives = 77/89 (86%)
Query: 228 LYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWMRS +RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF
Sbjct: 118 IYPWMRSSGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 177
Query: 287 QNRRMKWKKENKSKDGGSDAGSDITPATS 315
QNRRMKWKKE+K + + A ++ T A +
Sbjct: 178 QNRRMKWKKEHKEESSSTPAPNEPTSAAA 206
>ZFIN|ZDB-GENE-000329-2 [details] [associations]
symbol:hoxb7a "homeo box B7a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-000329-2 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 HOGENOM:HOG000231181
GeneTree:ENSGT00700000104090 eggNOG:NOG238660 HOVERGEN:HBG016849
KO:K09307 OrthoDB:EOG4W9J4Z EMBL:AL645782 EMBL:DQ060542 EMBL:Y14533
IPI:IPI00506071 RefSeq:NP_001108563.1 UniGene:Dr.75790
ProteinModelPortal:Q8AWY9 SMR:Q8AWY9 STRING:Q8AWY9 PRIDE:Q8AWY9
Ensembl:ENSDART00000078453 GeneID:58044 KEGG:dre:58044 CTD:58044
InParanoid:Q8AWY9 OMA:NNENNLR NextBio:20892308 ArrayExpress:Q8AWY9
Bgee:Q8AWY9 Uniprot:Q8AWY9
Length = 227
Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
Identities = 70/84 (83%), Positives = 74/84 (88%)
Query: 228 LYPWMRSQ-FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWMRS +RKRGRQTY+RYQTLELEKEFHFNRYL+RRRRIEIAHALCLTERQIKIWF
Sbjct: 134 IYPWMRSTGADRKRGRQTYSRYQTLELEKEFHFNRYLSRRRRIEIAHALCLTERQIKIWF 193
Query: 287 QNRRMKWKKENKSKDGGSDAGSDI 310
QNRRMKWKKENKS D S A I
Sbjct: 194 QNRRMKWKKENKSTDRCSPAADQI 217
>UNIPROTKB|E1B8D8 [details] [associations]
symbol:HOXA7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048863 "stem cell
differentiation" evidence=IEA] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045656 "negative regulation of monocyte
differentiation" evidence=IEA] [GO:0045617 "negative regulation of
keratinocyte differentiation" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0002686 "negative regulation of
leukocyte migration" evidence=IEA] [GO:0001953 "negative regulation
of cell-matrix adhesion" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0045944 GO:GO:0048863
GO:GO:0002686 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0000122 GO:GO:0001953
GO:GO:0048704 CTD:3204 KO:K09307 OMA:EHKDEGP GO:GO:0045617
GO:GO:0045656 EMBL:DAAA02010938 IPI:IPI00715611
RefSeq:XP_002686901.1 RefSeq:XP_872865.2 Ensembl:ENSBTAT00000001908
GeneID:615851 KEGG:bta:615851 NextBio:20899823 Uniprot:E1B8D8
Length = 238
Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
Identities = 73/97 (75%), Positives = 77/97 (79%)
Query: 221 SASLPSPLYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
SA +YPWMRS +RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE
Sbjct: 112 SAEANFRIYPWMRSSGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 171
Query: 280 RQIKIWFQNRRMKWKKENKSKD-GGSDAGSDITPATS 315
RQIKIWFQNRRMKWKKE+K + S A PA S
Sbjct: 172 RQIKIWFQNRRMKWKKEHKEESPAASGAPEGAAPAAS 208
>UNIPROTKB|Q9TT89 [details] [associations]
symbol:HOXB7 "Homeobox protein Hox-B7" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
HOGENOM:HOG000231181 eggNOG:NOG238660 HOVERGEN:HBG016849 KO:K09307
OrthoDB:EOG4W9J4Z EMBL:AF200721 IPI:IPI00699636 RefSeq:NP_776767.1
UniGene:Bt.91790 ProteinModelPortal:Q9TT89 SMR:Q9TT89 PRIDE:Q9TT89
GeneID:281820 KEGG:bta:281820 CTD:3217 InParanoid:Q9TT89
NextBio:20805731 Uniprot:Q9TT89
Length = 217
Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
Identities = 69/83 (83%), Positives = 74/83 (89%)
Query: 228 LYPWMRSQ-FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWMRS +RKRGRQTYTRYQTLELEKEFH+NRYLTRRRRIEIAHALCLTERQIKIWF
Sbjct: 126 IYPWMRSSGTDRKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWF 185
Query: 287 QNRRMKWKKENKSKDGGSDAGSD 309
QNRRMKWKKENK+ G+ G D
Sbjct: 186 QNRRMKWKKENKTSGPGT-TGQD 207
>UNIPROTKB|F1N1K1 [details] [associations]
symbol:HOXB7 "Homeobox protein Hox-B7" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0090190 "positive
regulation of branching involved in ureteric bud morphogenesis"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA] [GO:0030099 "myeloid cell differentiation"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
GO:GO:0090190 GO:GO:0048704 GO:GO:0030099 IPI:IPI00699636
UniGene:Bt.91790 OMA:WMRSSGT EMBL:DAAA02049062
Ensembl:ENSBTAT00000007292 Uniprot:F1N1K1
Length = 217
Score = 364 (133.2 bits), Expect = 2.0e-33, P = 2.0e-33
Identities = 69/83 (83%), Positives = 74/83 (89%)
Query: 228 LYPWMRSQ-FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWMRS +RKRGRQTYTRYQTLELEKEFH+NRYLTRRRRIEIAHALCLTERQIKIWF
Sbjct: 126 IYPWMRSSGTDRKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWF 185
Query: 287 QNRRMKWKKENKSKDGGSDAGSD 309
QNRRMKWKKENK+ G+ A D
Sbjct: 186 QNRRMKWKKENKTSGPGA-ASQD 207
>MGI|MGI:96179 [details] [associations]
symbol:Hoxa7 "homeobox A7" species:10090 "Mus musculus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO;IDA] [GO:0001953 "negative
regulation of cell-matrix adhesion" evidence=ISO] [GO:0002686
"negative regulation of leukocyte migration" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=ISO]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IGI] [GO:0043565 "sequence-specific DNA binding"
evidence=ISO] [GO:0045617 "negative regulation of keratinocyte
differentiation" evidence=ISO] [GO:0045656 "negative regulation of
monocyte differentiation" evidence=ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IGI] [GO:0048863 "stem cell
differentiation" evidence=IDA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 MGI:MGI:96179
GO:GO:0005634 GO:GO:0009952 GO:GO:0003677 GO:GO:0043565
GO:GO:0045944 GO:GO:0048863 GO:GO:0002686 GO:GO:0003700
GO:GO:0006351 GO:GO:0001525 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 HOGENOM:HOG000231181
GeneTree:ENSGT00700000104090 GO:GO:0000122 GO:GO:0001953
GO:GO:0048704 eggNOG:NOG238660 HOVERGEN:HBG016849 CTD:3204
KO:K09307 OrthoDB:EOG4W9J4Z OMA:EHKDEGP GO:GO:0045617 GO:GO:0045656
EMBL:M17192 EMBL:U15972 EMBL:AK033500 EMBL:BC131978 EMBL:BC132643
IPI:IPI00113735 PIR:A03314 PIR:A28329 RefSeq:NP_034585.1
UniGene:Mm.294826 ProteinModelPortal:P02830 SMR:P02830
IntAct:P02830 MINT:MINT-1172633 STRING:P02830 PRIDE:P02830
Ensembl:ENSMUST00000048715 GeneID:15404 KEGG:mmu:15404
UCSC:uc009byj.1 InParanoid:A2RS54 NextBio:288110 Bgee:P02830
CleanEx:MM_HOXA7 Genevestigator:P02830
GermOnline:ENSMUSG00000038236 Uniprot:P02830
Length = 229
Score = 364 (133.2 bits), Expect = 2.0e-33, P = 2.0e-33
Identities = 70/90 (77%), Positives = 75/90 (83%)
Query: 228 LYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWMRS +RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF
Sbjct: 118 IYPWMRSSGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 177
Query: 287 QNRRMKWKKENKSKDGGSDAG-SDITPATS 315
QNRRMKWKKE+K + A D P+ S
Sbjct: 178 QNRRMKWKKEHKDESQAPTAAPEDAVPSVS 207
>ZFIN|ZDB-GENE-990415-108 [details] [associations]
symbol:hoxb8a "homeo box B8a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-990415-108 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00700000104332 EMBL:BX927395
IPI:IPI00993559 Ensembl:ENSDART00000123837 ArrayExpress:E7FB54
Bgee:E7FB54 Uniprot:E7FB54
Length = 246
Score = 315 (115.9 bits), Expect = 2.4e-33, Sum P(2) = 2.4e-33
Identities = 60/79 (75%), Positives = 69/79 (87%)
Query: 225 PSPLYPWMRSQFE--RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQI 282
P+ L+PWMR Q R+RGRQTY+RYQTLELEKEF FN YLTR+RRIE++HAL LTERQ+
Sbjct: 131 PTQLFPWMRPQVAAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQV 190
Query: 283 KIWFQNRRMKWKKENKSKD 301
KIWFQNRRMKWKKEN +KD
Sbjct: 191 KIWFQNRRMKWKKEN-NKD 208
Score = 64 (27.6 bits), Expect = 2.4e-33, Sum P(2) = 2.4e-33
Identities = 35/134 (26%), Positives = 54/134 (40%)
Query: 1 MSSYFANSYMPDIKNGGVLPPEHHQ---QHHYGA--TVLPQNNGVEDPSMYDPR--QVHH 53
MSSYF NS K+G L P +++ G TV+ G + P+ + +H
Sbjct: 1 MSSYFVNSLFTKYKSGDTLRPNYYECGFAQDLGTRPTVV-YGPGTGATFQHAPQIQEFYH 59
Query: 54 YGQ-----VPNNGQPV----HGMPYPRFPPYDRMDIRNAAYYGAHEGGMEQYPRPDSPSM 104
+G P P HG P F YD + + +GA + + QY +
Sbjct: 60 HGASTLSAAPYQQSPCAVTCHGEP-GNFYGYDAL--QRQTLFGAQDADLVQYS-DCKLAT 115
Query: 105 GHMGPQ--NGHQTP 116
G +G + N Q+P
Sbjct: 116 GGIGDETDNTEQSP 129
>UNIPROTKB|Q6B3N0 [details] [associations]
symbol:HOXA5 "Homeobox protein Hox-A5" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOVERGEN:HBG016849 eggNOG:NOG236516 CTD:3202
KO:K09305 EMBL:AY686640 IPI:IPI00602185 RefSeq:XP_003640747.1
RefSeq:XP_003640753.1 RefSeq:XP_003640770.1 UniGene:Gga.11995
ProteinModelPortal:Q6B3N0 SMR:Q6B3N0 STRING:Q6B3N0 GeneID:100857257
GeneID:100858404 GeneID:100858834 KEGG:gga:100857257
KEGG:gga:100858404 KEGG:gga:100858834 Uniprot:Q6B3N0
Length = 270
Score = 319 (117.4 bits), Expect = 3.8e-33, Sum P(2) = 3.8e-33
Identities = 69/104 (66%), Positives = 74/104 (71%)
Query: 221 SASLPS-P-LYPWMRSQF---------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRI 269
S + PS P +YPWMR E KR R YTRYQTLELEKEFHFNRYLTRRRRI
Sbjct: 167 STAQPSQPQIYPWMRKLHISHDNIGGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRI 226
Query: 270 EIAHALCLTERQIKIWFQNRRMKWKKENKSKDGG-SDAGSDITP 312
EIAHALCL+ERQIKIWFQNRRMKWKK+NK K + AG P
Sbjct: 227 EIAHALCLSERQIKIWFQNRRMKWKKDNKLKSMSMAAAGGAFRP 270
Score = 58 (25.5 bits), Expect = 3.8e-33, Sum P(2) = 3.8e-33
Identities = 18/54 (33%), Positives = 25/54 (46%)
Query: 1 MSSYFANSYMPDIKNGGVLPPEHHQQHHYGATVLPQNNGVEDPSMYDPRQVHHY 54
MSSYF NS+ NG P++ Q H+YG + SM+ R + Y
Sbjct: 1 MSSYFVNSFCGRYPNG----PDY-QLHNYGDHSSVSEQYRDSASMHSGRYGYGY 49
Score = 47 (21.6 bits), Expect = 5.5e-32, Sum P(2) = 5.5e-32
Identities = 17/40 (42%), Positives = 18/40 (45%)
Query: 69 YPRFPPYDRMDIRNAAYYGAHEGGMEQYPRPDSPSMGHMG 108
YP P Y + N YG H EQY DS SM H G
Sbjct: 13 YPNGPDYQ---LHN---YGDHSSVSEQYR--DSASM-HSG 43
>UNIPROTKB|P09629 [details] [associations]
symbol:HOXB7 "Homeobox protein Hox-B7" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0030099 "myeloid cell differentiation"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA] [GO:0090190 "positive regulation of branching
involved in ureteric bud morphogenesis" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=NAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=NAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=NAS] [GO:0005634 "nucleus" evidence=IDA;NAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0005737 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
HOGENOM:HOG000231181 EMBL:CH471109 GO:GO:0090190 GO:GO:0048704
eggNOG:NOG238660 GO:GO:0030099 HOVERGEN:HBG016849 KO:K09307
OrthoDB:EOG4W9J4Z EMBL:AC103702 CTD:3217 EMBL:M16937 EMBL:AK290653
EMBL:AK223249 EMBL:BC015345 EMBL:S49765 EMBL:M30598 IPI:IPI00297418
PIR:A28030 RefSeq:NP_004493.3 UniGene:Hs.436181
ProteinModelPortal:P09629 SMR:P09629 IntAct:P09629 STRING:P09629
PhosphoSite:P09629 DMDM:311033482 PRIDE:P09629 DNASU:3217
Ensembl:ENST00000239165 GeneID:3217 KEGG:hsa:3217 UCSC:uc002inv.3
GeneCards:GC17M046684 HGNC:HGNC:5118 HPA:HPA049940 MIM:142962
neXtProt:NX_P09629 InParanoid:P09629 OMA:WMRSSGT PhylomeDB:P09629
GenomeRNAi:3217 NextBio:12800 ArrayExpress:P09629 Bgee:P09629
CleanEx:HS_HOXB7 Genevestigator:P09629 GermOnline:ENSG00000120087
Uniprot:P09629
Length = 217
Score = 361 (132.1 bits), Expect = 4.1e-33, P = 4.1e-33
Identities = 68/83 (81%), Positives = 73/83 (87%)
Query: 228 LYPWMRSQ-FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWMRS +RKRGRQTYTRYQTLELEKEFH+NRYLTRRRRIEIAH LCLTERQIKIWF
Sbjct: 126 IYPWMRSSGTDRKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHTLCLTERQIKIWF 185
Query: 287 QNRRMKWKKENKSKDGGSDAGSD 309
QNRRMKWKKENK+ G+ G D
Sbjct: 186 QNRRMKWKKENKTAGPGT-TGQD 207
>MGI|MGI:96188 [details] [associations]
symbol:Hoxb7 "homeobox B7" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IGI;IMP] [GO:0030099 "myeloid cell differentiation"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IGI;IMP] [GO:0090190 "positive regulation of branching
involved in ureteric bud morphogenesis" evidence=IMP]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
MGI:MGI:96188 GO:GO:0005634 GO:GO:0009952 GO:GO:0003677
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
HOGENOM:HOG000231181 GeneTree:ENSGT00700000104090 GO:GO:0090190
GO:GO:0048704 eggNOG:NOG238660 GO:GO:0030099 HOVERGEN:HBG016849
KO:K09307 OrthoDB:EOG4W9J4Z CTD:3217 OMA:WMRSSGT EMBL:Y00436
EMBL:X06762 EMBL:AK136706 EMBL:AL645478 EMBL:M18167 EMBL:M18400
EMBL:X14570 IPI:IPI00132379 PIR:A26846 RefSeq:NP_034590.2
UniGene:Mm.390366 ProteinModelPortal:P09024 SMR:P09024
IntAct:P09024 MINT:MINT-1172508 STRING:P09024 PhosphoSite:P09024
PRIDE:P09024 DNASU:15415 Ensembl:ENSMUST00000049352 GeneID:15415
KEGG:mmu:15415 UCSC:uc007lbr.1 InParanoid:A2A9Z9 NextBio:288146
Bgee:P09024 CleanEx:MM_HOXB7 Genevestigator:P09024
GermOnline:ENSMUSG00000038721 Uniprot:P09024
Length = 217
Score = 361 (132.1 bits), Expect = 4.1e-33, P = 4.1e-33
Identities = 68/83 (81%), Positives = 73/83 (87%)
Query: 228 LYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWMRS +RKRGRQTYTRYQTLELEKEFH+NRYLTRRRRIEIAH LCLTERQIKIWF
Sbjct: 126 IYPWMRSSGPDRKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHTLCLTERQIKIWF 185
Query: 287 QNRRMKWKKENKSKDGGSDAGSD 309
QNRRMKWKKENK+ G+ G D
Sbjct: 186 QNRRMKWKKENKTSGPGT-TGQD 207
>UNIPROTKB|E2QT40 [details] [associations]
symbol:HOXB6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 KO:K09306 CTD:3216 RefSeq:XP_003435306.1
ProteinModelPortal:E2QT40 Ensembl:ENSCAFT00000026682 GeneID:491056
KEGG:cfa:491056 NextBio:20863955 Uniprot:E2QT40
Length = 224
Score = 329 (120.9 bits), Expect = 4.9e-33, Sum P(2) = 4.9e-33
Identities = 64/82 (78%), Positives = 70/82 (85%)
Query: 226 SPLYPWMR-------SQF--ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALC 276
+P+YPWM+ S F +RGRQTYTRYQTLELEKEFH+NRYLTRRRRIEIAHALC
Sbjct: 125 TPVYPWMQRMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALC 184
Query: 277 LTERQIKIWFQNRRMKWKKENK 298
LTERQIKIWFQNRRMKWKKE+K
Sbjct: 185 LTERQIKIWFQNRRMKWKKESK 206
Score = 47 (21.6 bits), Expect = 4.9e-33, Sum P(2) = 4.9e-33
Identities = 22/74 (29%), Positives = 28/74 (37%)
Query: 1 MSSYFANSYMPDIKNGGVLPPEHHQQHHYGATVLPQNNGVEDPSMYDPRQVHHYGQVPNN 60
MSSYF NS P G Q+ G L ++G DP + P YG P
Sbjct: 1 MSSYFVNSTFPVTLASG-------QESFLGQLPL-YSSGYADPLRHYPAP---YGPGPGQ 49
Query: 61 GQPVHGMPYPRFPP 74
+ Y +PP
Sbjct: 50 DKGFAASSY--YPP 61
>UNIPROTKB|F6UVZ9 [details] [associations]
symbol:HOXB6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 OMA:AEGSCAF
GeneTree:ENSGT00700000104332 Ensembl:ENSCAFT00000026682
EMBL:AAEX03006516 Uniprot:F6UVZ9
Length = 232
Score = 329 (120.9 bits), Expect = 4.9e-33, Sum P(2) = 4.9e-33
Identities = 64/82 (78%), Positives = 70/82 (85%)
Query: 226 SPLYPWMR-------SQF--ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALC 276
+P+YPWM+ S F +RGRQTYTRYQTLELEKEFH+NRYLTRRRRIEIAHALC
Sbjct: 125 TPVYPWMQRMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALC 184
Query: 277 LTERQIKIWFQNRRMKWKKENK 298
LTERQIKIWFQNRRMKWKKE+K
Sbjct: 185 LTERQIKIWFQNRRMKWKKESK 206
Score = 47 (21.6 bits), Expect = 4.9e-33, Sum P(2) = 4.9e-33
Identities = 22/74 (29%), Positives = 28/74 (37%)
Query: 1 MSSYFANSYMPDIKNGGVLPPEHHQQHHYGATVLPQNNGVEDPSMYDPRQVHHYGQVPNN 60
MSSYF NS P G Q+ G L ++G DP + P YG P
Sbjct: 1 MSSYFVNSTFPVTLASG-------QESFLGQLPL-YSSGYADPLRHYPAP---YGPGPGQ 49
Query: 61 GQPVHGMPYPRFPP 74
+ Y +PP
Sbjct: 50 DKGFAASSY--YPP 61
>UNIPROTKB|F1RWG1 [details] [associations]
symbol:HOXB6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0034101
"erythrocyte homeostasis" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048704 GO:GO:0034101
KO:K09306 OMA:AEGSCAF GeneTree:ENSGT00700000104332 EMBL:CU856160
RefSeq:XP_003358123.1 Ensembl:ENSSSCT00000019093 GeneID:100627849
KEGG:ssc:100627849 Uniprot:F1RWG1
Length = 224
Score = 329 (120.9 bits), Expect = 4.9e-33, Sum P(2) = 4.9e-33
Identities = 64/82 (78%), Positives = 70/82 (85%)
Query: 226 SPLYPWMR-------SQF--ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALC 276
+P+YPWM+ S F +RGRQTYTRYQTLELEKEFH+NRYLTRRRRIEIAHALC
Sbjct: 125 TPVYPWMQRMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALC 184
Query: 277 LTERQIKIWFQNRRMKWKKENK 298
LTERQIKIWFQNRRMKWKKE+K
Sbjct: 185 LTERQIKIWFQNRRMKWKKESK 206
Score = 47 (21.6 bits), Expect = 4.9e-33, Sum P(2) = 4.9e-33
Identities = 22/74 (29%), Positives = 28/74 (37%)
Query: 1 MSSYFANSYMPDIKNGGVLPPEHHQQHHYGATVLPQNNGVEDPSMYDPRQVHHYGQVPNN 60
MSSYF NS P G Q+ G L ++G DP + P YG P
Sbjct: 1 MSSYFVNSTFPVTLASG-------QESFLGQLPL-YSSGYADPLRHYPAP---YGPGPGQ 49
Query: 61 GQPVHGMPYPRFPP 74
+ Y +PP
Sbjct: 50 DKGFAASSY--YPP 61
>MGI|MGI:96187 [details] [associations]
symbol:Hoxb6 "homeobox B6" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IGI;IMP] [GO:0034101 "erythrocyte homeostasis"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IGI] [GO:0048706 "embryonic skeletal system development"
evidence=IGI;IMP] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 MGI:MGI:96187 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
HOGENOM:HOG000231181 GO:GO:0048704 GO:GO:0034101 HOVERGEN:HBG016849
KO:K09306 eggNOG:NOG305812 OrthoDB:EOG4G7C0G CTD:3216 EMBL:M18166
EMBL:X56459 EMBL:BC016893 EMBL:M18401 EMBL:J03782 IPI:IPI00132375
PIR:A31324 PIR:B29585 PIR:C27176 RefSeq:NP_032295.1 UniGene:Mm.215
ProteinModelPortal:P09023 SMR:P09023 DIP:DIP-59870N STRING:P09023
PhosphoSite:P09023 PaxDb:P09023 PRIDE:P09023
Ensembl:ENSMUST00000000704 Ensembl:ENSMUST00000173432 GeneID:15414
KEGG:mmu:15414 GeneTree:ENSGT00700000104332 InParanoid:P09023
OMA:FVNSSFP NextBio:288142 Bgee:P09023 CleanEx:MM_HOXB6
Genevestigator:P09023 GermOnline:ENSMUSG00000000690 Uniprot:P09023
Length = 224
Score = 329 (120.9 bits), Expect = 4.9e-33, Sum P(2) = 4.9e-33
Identities = 64/82 (78%), Positives = 70/82 (85%)
Query: 226 SPLYPWMR-------SQF--ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALC 276
+P+YPWM+ S F +RGRQTYTRYQTLELEKEFH+NRYLTRRRRIEIAHALC
Sbjct: 125 TPVYPWMQRMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALC 184
Query: 277 LTERQIKIWFQNRRMKWKKENK 298
LTERQIKIWFQNRRMKWKKE+K
Sbjct: 185 LTERQIKIWFQNRRMKWKKESK 206
Score = 47 (21.6 bits), Expect = 4.9e-33, Sum P(2) = 4.9e-33
Identities = 22/74 (29%), Positives = 28/74 (37%)
Query: 1 MSSYFANSYMPDIKNGGVLPPEHHQQHHYGATVLPQNNGVEDPSMYDPRQVHHYGQVPNN 60
MSSYF NS P G Q+ G L ++G DP + P YG P
Sbjct: 1 MSSYFVNSTFPVTLASG-------QESFLGQLPL-YSSGYADPLRHYPAP---YGPGPGQ 49
Query: 61 GQPVHGMPYPRFPP 74
+ Y +PP
Sbjct: 50 DKGFAASSY--YPP 61
>RGD|1562142 [details] [associations]
symbol:Hoxb6 "homeo box B6" species:10116 "Rattus norvegicus"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA;ISO] [GO:0034101 "erythrocyte homeostasis"
evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA;ISO] [GO:0048706 "embryonic skeletal system
development" evidence=ISO] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 RGD:1562142 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048704
EMBL:CH473948 GO:GO:0034101 KO:K09306 OrthoDB:EOG4G7C0G CTD:3216
GeneTree:ENSGT00700000104332 OMA:FVNSSFP IPI:IPI00196016
RefSeq:XP_003752419.1 RefSeq:XP_573182.1 SMR:D3ZLU8
Ensembl:ENSRNOT00000010527 GeneID:497986 KEGG:rno:497986
UCSC:RGD:1562142 NextBio:698302 Uniprot:D3ZLU8
Length = 224
Score = 329 (120.9 bits), Expect = 4.9e-33, Sum P(2) = 4.9e-33
Identities = 64/82 (78%), Positives = 70/82 (85%)
Query: 226 SPLYPWMR-------SQF--ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALC 276
+P+YPWM+ S F +RGRQTYTRYQTLELEKEFH+NRYLTRRRRIEIAHALC
Sbjct: 125 TPVYPWMQRMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALC 184
Query: 277 LTERQIKIWFQNRRMKWKKENK 298
LTERQIKIWFQNRRMKWKKE+K
Sbjct: 185 LTERQIKIWFQNRRMKWKKESK 206
Score = 47 (21.6 bits), Expect = 4.9e-33, Sum P(2) = 4.9e-33
Identities = 22/74 (29%), Positives = 28/74 (37%)
Query: 1 MSSYFANSYMPDIKNGGVLPPEHHQQHHYGATVLPQNNGVEDPSMYDPRQVHHYGQVPNN 60
MSSYF NS P G Q+ G L ++G DP + P YG P
Sbjct: 1 MSSYFVNSTFPVTLASG-------QESFLGQLPL-YSSGYADPLRHYPAP---YGPGPGQ 49
Query: 61 GQPVHGMPYPRFPP 74
+ Y +PP
Sbjct: 50 DKGFAASSY--YPP 61
>UNIPROTKB|E2R5U1 [details] [associations]
symbol:HOXA7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
CTD:3204 KO:K09307 OMA:EHKDEGP EMBL:AAEX03009390 RefSeq:XP_864678.2
Ensembl:ENSCAFT00000004737 GeneID:482371 KEGG:cfa:482371
Uniprot:E2R5U1
Length = 239
Score = 360 (131.8 bits), Expect = 5.2e-33, P = 5.2e-33
Identities = 68/89 (76%), Positives = 74/89 (83%)
Query: 228 LYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWMRS +RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF
Sbjct: 119 IYPWMRSSGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 178
Query: 287 QNRRMKWKKENKSKDGGSDAGSDITPATS 315
QNRRMKWKKE+K + + A P +
Sbjct: 179 QNRRMKWKKEHKDEGPAAAAPEGAVPTAA 207
>UNIPROTKB|P20719 [details] [associations]
symbol:HOXA5 "Homeobox protein Hox-A5" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003016 "respiratory system process" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0016477 "cell migration" evidence=IEA] [GO:0030878 "thyroid
gland development" evidence=IEA] [GO:0033599 "regulation of mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0035264
"multicellular organism growth" evidence=IEA] [GO:0048286 "lung
alveolus development" evidence=IEA] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA] [GO:0060435 "bronchiole
development" evidence=IEA] [GO:0060441 "epithelial tube branching
involved in lung morphogenesis" evidence=IEA] [GO:0060480 "lung
goblet cell differentiation" evidence=IEA] [GO:0060484
"lung-associated mesenchyme development" evidence=IEA] [GO:0060535
"trachea cartilage morphogenesis" evidence=IEA] [GO:0060574
"intestinal epithelial cell maturation" evidence=IEA] [GO:0060638
"mesenchymal-epithelial cell signaling" evidence=IEA] [GO:0060644
"mammary gland epithelial cell differentiation" evidence=IEA]
[GO:0060749 "mammary gland alveolus development" evidence=IEA]
[GO:0060764 "cell-cell signaling involved in mammary gland
development" evidence=IEA] [GO:0016525 "negative regulation of
angiogenesis" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IDA] [GO:0010870 "positive regulation
of receptor biosynthetic process" evidence=IDA] [GO:0003677 "DNA
binding" evidence=IDA] [GO:0045639 "positive regulation of myeloid
cell differentiation" evidence=IDA] [GO:0045647 "negative
regulation of erythrocyte differentiation" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0016477
GO:GO:0009952 GO:GO:0003677 EMBL:CH471073 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 EMBL:CH236948
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0043065 GO:GO:0048286 GO:GO:0035264 GO:GO:0003016
GO:GO:0016525 GO:GO:0060749 GO:GO:0060644 GO:GO:0048704
GO:GO:0033599 GO:GO:0060441 GO:GO:0060484 GO:GO:0030878
GO:GO:0010870 EMBL:AC004080 GO:GO:0045639 GO:GO:0045647
GO:GO:0060574 HOVERGEN:HBG016849 eggNOG:NOG236516
HOGENOM:HOG000231178 OMA:YRDSASM OrthoDB:EOG49S677 CTD:3202
KO:K09305 GO:GO:0060435 GO:GO:0060764 GO:GO:0060480 GO:GO:0060638
GO:GO:0060535 EMBL:M26679 EMBL:BT009744 EMBL:CR542256 EMBL:BC013682
IPI:IPI00302291 PIR:A24777 PIR:A32799 RefSeq:NP_061975.2
UniGene:Hs.655218 ProteinModelPortal:P20719 SMR:P20719
STRING:P20719 PhosphoSite:P20719 DMDM:52788238 PRIDE:P20719
DNASU:3202 Ensembl:ENST00000222726 GeneID:3202 KEGG:hsa:3202
UCSC:uc003syn.2 GeneCards:GC07M027180 H-InvDB:HIX0201165
HGNC:HGNC:5106 HPA:CAB032627 HPA:HPA029319 MIM:142952
neXtProt:NX_P20719 PharmGKB:PA29383 InParanoid:P20719
PhylomeDB:P20719 GenomeRNAi:3202 NextBio:12740 Bgee:P20719
CleanEx:HS_HOXA5 Genevestigator:P20719 GermOnline:ENSG00000106004
Uniprot:P20719
Length = 270
Score = 316 (116.3 bits), Expect = 6.2e-33, Sum P(2) = 6.2e-33
Identities = 65/95 (68%), Positives = 69/95 (72%)
Query: 228 LYPWMRSQF---------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWMR E KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+
Sbjct: 176 IYPWMRKLHISHDNIGGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLS 235
Query: 279 ERQIKIWFQNRRMKWKKENKSKDGG-SDAGSDITP 312
ERQIKIWFQNRRMKWKK+NK K + AG P
Sbjct: 236 ERQIKIWFQNRRMKWKKDNKLKSMSMAAAGGAFRP 270
Score = 59 (25.8 bits), Expect = 6.2e-33, Sum P(2) = 6.2e-33
Identities = 31/111 (27%), Positives = 42/111 (37%)
Query: 1 MSSYFANSYMPDIKNGGVLPPEHHQQHHYGATVLPQNNGVEDPSMYDPRQVHHY-GQVPN 59
MSSYF NS+ NG P++ Q H+YG + SM+ R + Y G +
Sbjct: 1 MSSYFVNSFCGRYPNG----PDY-QLHNYGDHSSVSEQFRDSASMHSGRYGYGYNGMDLS 55
Query: 60 NGQPVHGMPYPRFPPYDRMDIRNAAYYGAHEGGMEQYPRPDSPSMGHMGPQ 110
G+ G F +R A Y A PR P+ PQ
Sbjct: 56 VGRSGSG----HFGSGER-----ARSYAASASAAPAEPRYSQPATSTHSPQ 97
>UNIPROTKB|F1RWG2 [details] [associations]
symbol:HOXB7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0030099 "myeloid
cell differentiation" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0090190 "positive regulation of branching
involved in ureteric bud morphogenesis" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
GO:GO:0090190 GO:GO:0048704 GO:GO:0030099 KO:K09307 OMA:WMRSSGT
EMBL:CU856160 RefSeq:XP_003131597.1 UniGene:Ssc.22336
Ensembl:ENSSSCT00000019092 GeneID:100522513 KEGG:ssc:100522513
Uniprot:F1RWG2
Length = 217
Score = 359 (131.4 bits), Expect = 6.7e-33, P = 6.7e-33
Identities = 66/73 (90%), Positives = 70/73 (95%)
Query: 228 LYPWMRSQ-FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWMRS +RKRGRQTYTRYQTLELEKEFH+NRYLTRRRRIEIAHALCLTERQIKIWF
Sbjct: 126 IYPWMRSSGTDRKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWF 185
Query: 287 QNRRMKWKKENKS 299
QNRRMKWKKENK+
Sbjct: 186 QNRRMKWKKENKT 198
>UNIPROTKB|H9L183 [details] [associations]
symbol:HOXB7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0030099 "myeloid cell differentiation" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
[GO:0090190 "positive regulation of branching involved in ureteric
bud morphogenesis" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 OMA:WMRSSGT
EMBL:AADN02027109 EMBL:AADN02027110 Ensembl:ENSGALT00000029852
Uniprot:H9L183
Length = 217
Score = 336 (123.3 bits), Expect = 7.9e-33, Sum P(2) = 7.9e-33
Identities = 62/70 (88%), Positives = 66/70 (94%)
Query: 237 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
+RKRGRQTYTRYQTLELEKEFH+NRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE
Sbjct: 136 DRKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 195
Query: 297 NKSKDGGSDA 306
NK+ GS +
Sbjct: 196 NKTACSGSSS 205
Score = 38 (18.4 bits), Expect = 7.9e-33, Sum P(2) = 7.9e-33
Identities = 7/24 (29%), Positives = 10/24 (41%)
Query: 86 YGAHEGGMEQYPRPDSPSMGHMGP 109
YG G + P ++ HM P
Sbjct: 77 YGLEPGSFNMHCSPFEQNLSHMCP 100
>UNIPROTKB|P17509 [details] [associations]
symbol:HOXB6 "Homeobox protein Hox-B6" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0034101 "erythrocyte homeostasis" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA] [GO:0005634
"nucleus" evidence=NAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=NAS] [GO:0008595
"anterior/posterior axis specification, embryo" evidence=NAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0008595
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
HOGENOM:HOG000231181 EMBL:CH471109 GO:GO:0048704 GO:GO:0034101
HOVERGEN:HBG016849 KO:K09306 eggNOG:NOG305812 EMBL:AF287967
OrthoDB:EOG4G7C0G EMBL:X58431 EMBL:AJ270993 EMBL:AK292200
EMBL:BC014651 EMBL:M30597 EMBL:K02571 IPI:IPI00015075
IPI:IPI00216597 PIR:A05266 PIR:S26400 RefSeq:NP_061825.2
UniGene:Hs.98428 ProteinModelPortal:P17509 SMR:P17509 IntAct:P17509
MINT:MINT-1437085 STRING:P17509 PhosphoSite:P17509 DMDM:116242515
PRIDE:P17509 DNASU:3216 Ensembl:ENST00000225648
Ensembl:ENST00000484302 GeneID:3216 KEGG:hsa:3216 UCSC:uc002ins.1
UCSC:uc002int.1 CTD:3216 GeneCards:GC17M046673 HGNC:HGNC:5117
HPA:HPA042063 MIM:142961 neXtProt:NX_P17509 PharmGKB:PA29393
InParanoid:P17509 OMA:AEGSCAF PhylomeDB:P17509 GenomeRNAi:3216
NextBio:12796 Bgee:P17509 CleanEx:HS_HOXB6 Genevestigator:P17509
GermOnline:ENSG00000108511 Uniprot:P17509
Length = 224
Score = 329 (120.9 bits), Expect = 7.9e-33, Sum P(2) = 7.9e-33
Identities = 64/82 (78%), Positives = 70/82 (85%)
Query: 226 SPLYPWMR-------SQF--ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALC 276
+P+YPWM+ S F +RGRQTYTRYQTLELEKEFH+NRYLTRRRRIEIAHALC
Sbjct: 125 TPVYPWMQRMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALC 184
Query: 277 LTERQIKIWFQNRRMKWKKENK 298
LTERQIKIWFQNRRMKWKKE+K
Sbjct: 185 LTERQIKIWFQNRRMKWKKESK 206
Score = 45 (20.9 bits), Expect = 7.9e-33, Sum P(2) = 7.9e-33
Identities = 22/74 (29%), Positives = 28/74 (37%)
Query: 1 MSSYFANSYMPDIKNGGVLPPEHHQQHHYGATVLPQNNGVEDPSMYDPRQVHHYGQVPNN 60
MSSYF NS P G Q+ G L ++G DP + P YG P
Sbjct: 1 MSSYFVNSTFPVTLASG-------QESFLGQLPL-YSSGYADPLRHYPAP---YGPGPGQ 49
Query: 61 GQPVHGMPYPRFPP 74
+ Y +PP
Sbjct: 50 DKGFATSSY--YPP 61
>UNIPROTKB|Q2HJ67 [details] [associations]
symbol:HOXA5 "Homeobox protein Hox-A5" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0060764 "cell-cell
signaling involved in mammary gland development" evidence=IEA]
[GO:0060749 "mammary gland alveolus development" evidence=IEA]
[GO:0060644 "mammary gland epithelial cell differentiation"
evidence=IEA] [GO:0060638 "mesenchymal-epithelial cell signaling"
evidence=IEA] [GO:0060574 "intestinal epithelial cell maturation"
evidence=IEA] [GO:0060535 "trachea cartilage morphogenesis"
evidence=IEA] [GO:0060484 "lung-associated mesenchyme development"
evidence=IEA] [GO:0060480 "lung goblet cell differentiation"
evidence=IEA] [GO:0060441 "epithelial tube branching involved in
lung morphogenesis" evidence=IEA] [GO:0060435 "bronchiole
development" evidence=IEA] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IEA] [GO:0048286 "lung alveolus
development" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045647 "negative regulation of erythrocyte differentiation"
evidence=IEA] [GO:0045639 "positive regulation of myeloid cell
differentiation" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IEA] [GO:0035264 "multicellular
organism growth" evidence=IEA] [GO:0033599 "regulation of mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0030878
"thyroid gland development" evidence=IEA] [GO:0016525 "negative
regulation of angiogenesis" evidence=IEA] [GO:0016477 "cell
migration" evidence=IEA] [GO:0010870 "positive regulation of
receptor biosynthetic process" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003016 "respiratory system process"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0016477
GO:GO:0009952 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0043065 GO:GO:0048286 GO:GO:0035264
GO:GO:0003016 GO:GO:0016525 GO:GO:0060749 GO:GO:0060644
GO:GO:0048704 GO:GO:0033599 GO:GO:0060441 GO:GO:0060484
GO:GO:0030878 GO:GO:0010870 GeneTree:ENSGT00700000104189
GO:GO:0045639 GO:GO:0045647 GO:GO:0060574 HOVERGEN:HBG016849
eggNOG:NOG236516 HOGENOM:HOG000231178 OMA:YRDSASM OrthoDB:EOG49S677
EMBL:BC113284 IPI:IPI00711374 RefSeq:NP_001070566.1
UniGene:Bt.11342 ProteinModelPortal:Q2HJ67 SMR:Q2HJ67 PRIDE:Q2HJ67
Ensembl:ENSBTAT00000016196 GeneID:768039 KEGG:bta:768039 CTD:3202
InParanoid:Q2HJ67 KO:K09305 NextBio:20918394 GO:GO:0060435
GO:GO:0060764 GO:GO:0060480 GO:GO:0060638 GO:GO:0060535
Uniprot:Q2HJ67
Length = 270
Score = 316 (116.3 bits), Expect = 7.9e-33, Sum P(2) = 7.9e-33
Identities = 65/95 (68%), Positives = 69/95 (72%)
Query: 228 LYPWMRSQF---------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWMR E KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+
Sbjct: 176 IYPWMRKLHISHDNIGGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLS 235
Query: 279 ERQIKIWFQNRRMKWKKENKSKDGG-SDAGSDITP 312
ERQIKIWFQNRRMKWKK+NK K + AG P
Sbjct: 236 ERQIKIWFQNRRMKWKKDNKLKSMSMAAAGGAFRP 270
Score = 58 (25.5 bits), Expect = 7.9e-33, Sum P(2) = 7.9e-33
Identities = 18/54 (33%), Positives = 25/54 (46%)
Query: 1 MSSYFANSYMPDIKNGGVLPPEHHQQHHYGATVLPQNNGVEDPSMYDPRQVHHY 54
MSSYF NS+ NG P++ Q H+YG + SM+ R + Y
Sbjct: 1 MSSYFVNSFCGRYPNG----PDY-QLHNYGDHSSVSEQFRDSASMHSGRYGYGY 49
>UNIPROTKB|E2R5W8 [details] [associations]
symbol:HOXA5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0060764
"cell-cell signaling involved in mammary gland development"
evidence=IEA] [GO:0060749 "mammary gland alveolus development"
evidence=IEA] [GO:0060644 "mammary gland epithelial cell
differentiation" evidence=IEA] [GO:0060638 "mesenchymal-epithelial
cell signaling" evidence=IEA] [GO:0060574 "intestinal epithelial
cell maturation" evidence=IEA] [GO:0060535 "trachea cartilage
morphogenesis" evidence=IEA] [GO:0060484 "lung-associated
mesenchyme development" evidence=IEA] [GO:0060480 "lung goblet cell
differentiation" evidence=IEA] [GO:0060441 "epithelial tube
branching involved in lung morphogenesis" evidence=IEA] [GO:0060435
"bronchiole development" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0048286 "lung
alveolus development" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045647 "negative regulation of erythrocyte
differentiation" evidence=IEA] [GO:0045639 "positive regulation of
myeloid cell differentiation" evidence=IEA] [GO:0043065 "positive
regulation of apoptotic process" evidence=IEA] [GO:0035264
"multicellular organism growth" evidence=IEA] [GO:0033599
"regulation of mammary gland epithelial cell proliferation"
evidence=IEA] [GO:0030878 "thyroid gland development" evidence=IEA]
[GO:0016525 "negative regulation of angiogenesis" evidence=IEA]
[GO:0016477 "cell migration" evidence=IEA] [GO:0010870 "positive
regulation of receptor biosynthetic process" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003016
"respiratory system process" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0016477 GO:GO:0009952 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0043065 GO:GO:0048286 GO:GO:0035264
GO:GO:0003016 GO:GO:0016525 GO:GO:0060749 GO:GO:0060644
GO:GO:0048704 GO:GO:0033599 GO:GO:0060441 GO:GO:0060484
GO:GO:0030878 GO:GO:0010870 GeneTree:ENSGT00700000104189
GO:GO:0045639 GO:GO:0045647 GO:GO:0060574 OMA:YRDSASM CTD:3202
KO:K09305 GO:GO:0060435 GO:GO:0060764 GO:GO:0060480 GO:GO:0060638
GO:GO:0060535 EMBL:AAEX03009390 RefSeq:XP_539487.2
ProteinModelPortal:E2R5W8 SMR:E2R5W8 PRIDE:E2R5W8
Ensembl:ENSCAFT00000004723 GeneID:482370 KEGG:cfa:482370
NextBio:20856983 Uniprot:E2R5W8
Length = 270
Score = 316 (116.3 bits), Expect = 7.9e-33, Sum P(2) = 7.9e-33
Identities = 65/95 (68%), Positives = 69/95 (72%)
Query: 228 LYPWMRSQF---------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWMR E KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+
Sbjct: 176 IYPWMRKLHISHDNIGGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLS 235
Query: 279 ERQIKIWFQNRRMKWKKENKSKDGG-SDAGSDITP 312
ERQIKIWFQNRRMKWKK+NK K + AG P
Sbjct: 236 ERQIKIWFQNRRMKWKKDNKLKSMSMAAAGGAFRP 270
Score = 58 (25.5 bits), Expect = 7.9e-33, Sum P(2) = 7.9e-33
Identities = 18/54 (33%), Positives = 25/54 (46%)
Query: 1 MSSYFANSYMPDIKNGGVLPPEHHQQHHYGATVLPQNNGVEDPSMYDPRQVHHY 54
MSSYF NS+ NG P++ Q H+YG + SM+ R + Y
Sbjct: 1 MSSYFVNSFCGRYPNG----PDY-QLHNYGDHSSVSEQFRDSASMHSGRYGYGY 49
>UNIPROTKB|E1U314 [details] [associations]
symbol:Hoxa5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0060764 "cell-cell
signaling involved in mammary gland development" evidence=IEA]
[GO:0060749 "mammary gland alveolus development" evidence=IEA]
[GO:0060644 "mammary gland epithelial cell differentiation"
evidence=IEA] [GO:0060638 "mesenchymal-epithelial cell signaling"
evidence=IEA] [GO:0060574 "intestinal epithelial cell maturation"
evidence=IEA] [GO:0060535 "trachea cartilage morphogenesis"
evidence=IEA] [GO:0060484 "lung-associated mesenchyme development"
evidence=IEA] [GO:0060480 "lung goblet cell differentiation"
evidence=IEA] [GO:0060441 "epithelial tube branching involved in
lung morphogenesis" evidence=IEA] [GO:0060435 "bronchiole
development" evidence=IEA] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IEA] [GO:0048286 "lung alveolus
development" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045647 "negative regulation of erythrocyte differentiation"
evidence=IEA] [GO:0045639 "positive regulation of myeloid cell
differentiation" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IEA] [GO:0035264 "multicellular
organism growth" evidence=IEA] [GO:0033599 "regulation of mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0030878
"thyroid gland development" evidence=IEA] [GO:0016525 "negative
regulation of angiogenesis" evidence=IEA] [GO:0016477 "cell
migration" evidence=IEA] [GO:0010870 "positive regulation of
receptor biosynthetic process" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003016 "respiratory system process"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0016477
GO:GO:0009952 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0043065 GO:GO:0048286 GO:GO:0035264 GO:GO:0003016
GO:GO:0016525 GO:GO:0060749 GO:GO:0060644 GO:GO:0048704
GO:GO:0033599 GO:GO:0060441 GO:GO:0060484 GO:GO:0030878
GO:GO:0010870 GeneTree:ENSGT00700000104189 GO:GO:0045639
GO:GO:0045647 GO:GO:0060574 OMA:YRDSASM CTD:3202 KO:K09305
GO:GO:0060435 GO:GO:0060764 GO:GO:0060480 GO:GO:0060638
GO:GO:0060535 EMBL:CU570959 EMBL:EU914851 EMBL:EU914852
RefSeq:NP_001182161.1 UniGene:Ssc.47987 Ensembl:ENSSSCT00000018184
GeneID:100499568 KEGG:ssc:100499568 Uniprot:E1U314
Length = 270
Score = 316 (116.3 bits), Expect = 7.9e-33, Sum P(2) = 7.9e-33
Identities = 65/95 (68%), Positives = 69/95 (72%)
Query: 228 LYPWMRSQF---------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWMR E KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+
Sbjct: 176 IYPWMRKLHISHDNIGGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLS 235
Query: 279 ERQIKIWFQNRRMKWKKENKSKDGG-SDAGSDITP 312
ERQIKIWFQNRRMKWKK+NK K + AG P
Sbjct: 236 ERQIKIWFQNRRMKWKKDNKLKSMSMAAAGGAFRP 270
Score = 58 (25.5 bits), Expect = 7.9e-33, Sum P(2) = 7.9e-33
Identities = 18/54 (33%), Positives = 25/54 (46%)
Query: 1 MSSYFANSYMPDIKNGGVLPPEHHQQHHYGATVLPQNNGVEDPSMYDPRQVHHY 54
MSSYF NS+ NG P++ Q H+YG + SM+ R + Y
Sbjct: 1 MSSYFVNSFCGRYPNG----PDY-QLHNYGDHSSVSEQFRDSASMHSGRYGYGY 49
>MGI|MGI:96177 [details] [associations]
symbol:Hoxa5 "homeobox A5" species:10090 "Mus musculus"
[GO:0001501 "skeletal system development" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0003016
"respiratory system process" evidence=IMP] [GO:0003677 "DNA
binding" evidence=ISO;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007389 "pattern specification
process" evidence=IMP] [GO:0007585 "respiratory gaseous exchange"
evidence=IMP] [GO:0009952 "anterior/posterior pattern
specification" evidence=IGI;IMP] [GO:0010870 "positive regulation
of receptor biosynthetic process" evidence=ISO] [GO:0016477 "cell
migration" evidence=IMP] [GO:0016525 "negative regulation of
angiogenesis" evidence=ISO] [GO:0030324 "lung development"
evidence=IMP] [GO:0030878 "thyroid gland development" evidence=IMP]
[GO:0033599 "regulation of mammary gland epithelial cell
proliferation" evidence=IMP] [GO:0035264 "multicellular organism
growth" evidence=IMP] [GO:0043065 "positive regulation of apoptotic
process" evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045639 "positive regulation of myeloid cell
differentiation" evidence=ISO] [GO:0045647 "negative regulation of
erythrocyte differentiation" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IDA] [GO:0048286 "lung alveolus development"
evidence=IMP] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IMP] [GO:0048706 "embryonic skeletal system development"
evidence=IGI] [GO:0060435 "bronchiole development" evidence=IMP]
[GO:0060439 "trachea morphogenesis" evidence=IMP] [GO:0060441
"epithelial tube branching involved in lung morphogenesis"
evidence=IMP] [GO:0060480 "lung goblet cell differentiation"
evidence=IMP] [GO:0060481 "lobar bronchus epithelium development"
evidence=IMP] [GO:0060484 "lung-associated mesenchyme development"
evidence=IMP] [GO:0060535 "trachea cartilage morphogenesis"
evidence=IMP] [GO:0060536 "cartilage morphogenesis" evidence=IMP]
[GO:0060574 "intestinal epithelial cell maturation" evidence=IMP]
[GO:0060638 "mesenchymal-epithelial cell signaling" evidence=IMP]
[GO:0060644 "mammary gland epithelial cell differentiation"
evidence=IMP] [GO:0060749 "mammary gland alveolus development"
evidence=IMP] [GO:0060764 "cell-cell signaling involved in mammary
gland development" evidence=IMP] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 MGI:MGI:96177
GO:GO:0005634 GO:GO:0016477 GO:GO:0009952 GO:GO:0003677
GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0043065 GO:GO:0048286 GO:GO:0035264 GO:GO:0003016
GO:GO:0016525 GO:GO:0060749 GO:GO:0060644 GO:GO:0048704
GO:GO:0033599 GO:GO:0060441 GO:GO:0060484 GO:GO:0030878
GO:GO:0010870 GeneTree:ENSGT00700000104189 GO:GO:0045639
GO:GO:0045647 GO:GO:0060574 HOVERGEN:HBG016849 eggNOG:NOG236516
HOGENOM:HOG000231178 OMA:YRDSASM OrthoDB:EOG49S677 CTD:3202
KO:K09305 GO:GO:0060435 GO:GO:0060764 GO:GO:0060480 GO:GO:0060638
GO:GO:0060535 EMBL:M36604 EMBL:Y00208 EMBL:X16840 EMBL:M28021
EMBL:BC011063 IPI:IPI00132371 PIR:S07812 RefSeq:NP_034583.1
UniGene:Mm.173 ProteinModelPortal:P09021 SMR:P09021 IntAct:P09021
STRING:P09021 PhosphoSite:P09021 PaxDb:P09021 PRIDE:P09021
Ensembl:ENSMUST00000048794 GeneID:15402 KEGG:mmu:15402
UCSC:uc009byh.1 InParanoid:P09021 NextBio:288102 Bgee:P09021
CleanEx:MM_HOXA5 Genevestigator:P09021
GermOnline:ENSMUSG00000038253 Uniprot:P09021
Length = 270
Score = 316 (116.3 bits), Expect = 7.9e-33, Sum P(2) = 7.9e-33
Identities = 65/95 (68%), Positives = 69/95 (72%)
Query: 228 LYPWMRSQF---------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWMR E KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+
Sbjct: 176 IYPWMRKLHISHDNIGGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLS 235
Query: 279 ERQIKIWFQNRRMKWKKENKSKDGG-SDAGSDITP 312
ERQIKIWFQNRRMKWKK+NK K + AG P
Sbjct: 236 ERQIKIWFQNRRMKWKKDNKLKSMSMAAAGGAFRP 270
Score = 58 (25.5 bits), Expect = 7.9e-33, Sum P(2) = 7.9e-33
Identities = 18/54 (33%), Positives = 25/54 (46%)
Query: 1 MSSYFANSYMPDIKNGGVLPPEHHQQHHYGATVLPQNNGVEDPSMYDPRQVHHY 54
MSSYF NS+ NG P++ Q H+YG + SM+ R + Y
Sbjct: 1 MSSYFVNSFCGRYPNG----PDY-QLHNYGDHSSVSEQFRDSASMHSGRYGYGY 49
>RGD|6492497 [details] [associations]
symbol:LOC100911546 "homeobox protein Hox-A5-like" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 RGD:620609 RGD:6492497 RGD:6502805
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104189 OMA:YRDSASM CTD:3202 KO:K09305
UniGene:Rn.8465 EMBL:CH474011 EMBL:AC122669 RefSeq:XP_003749797.1
RefSeq:XP_003749803.1 RefSeq:XP_003752228.1 RefSeq:XP_003753945.1
SMR:G3V6T2 Ensembl:ENSRNOT00000008523 GeneID:100909641
GeneID:100911546 GeneID:79241 KEGG:rno:100909641 KEGG:rno:100911546
KEGG:rno:79241 Uniprot:G3V6T2
Length = 270
Score = 316 (116.3 bits), Expect = 7.9e-33, Sum P(2) = 7.9e-33
Identities = 65/95 (68%), Positives = 69/95 (72%)
Query: 228 LYPWMRSQF---------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWMR E KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+
Sbjct: 176 IYPWMRKLHISHDNIGGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLS 235
Query: 279 ERQIKIWFQNRRMKWKKENKSKDGG-SDAGSDITP 312
ERQIKIWFQNRRMKWKK+NK K + AG P
Sbjct: 236 ERQIKIWFQNRRMKWKKDNKLKSMSMAAAGGAFRP 270
Score = 58 (25.5 bits), Expect = 7.9e-33, Sum P(2) = 7.9e-33
Identities = 18/54 (33%), Positives = 25/54 (46%)
Query: 1 MSSYFANSYMPDIKNGGVLPPEHHQQHHYGATVLPQNNGVEDPSMYDPRQVHHY 54
MSSYF NS+ NG P++ Q H+YG + SM+ R + Y
Sbjct: 1 MSSYFVNSFCGRYPNG----PDY-QLHNYGDHSSVSEQFRDSASMHSGRYGYGY 49
>RGD|6502805 [details] [associations]
symbol:LOC100909641 "homeobox protein Hox-A5-like" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 RGD:620609 RGD:6492497 RGD:6502805
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104189 OMA:YRDSASM CTD:3202 KO:K09305
UniGene:Rn.8465 EMBL:CH474011 EMBL:AC122669 RefSeq:XP_003749797.1
RefSeq:XP_003749803.1 RefSeq:XP_003752228.1 RefSeq:XP_003753945.1
SMR:G3V6T2 Ensembl:ENSRNOT00000008523 GeneID:100909641
GeneID:100911546 GeneID:79241 KEGG:rno:100909641 KEGG:rno:100911546
KEGG:rno:79241 Uniprot:G3V6T2
Length = 270
Score = 316 (116.3 bits), Expect = 7.9e-33, Sum P(2) = 7.9e-33
Identities = 65/95 (68%), Positives = 69/95 (72%)
Query: 228 LYPWMRSQF---------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWMR E KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+
Sbjct: 176 IYPWMRKLHISHDNIGGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLS 235
Query: 279 ERQIKIWFQNRRMKWKKENKSKDGG-SDAGSDITP 312
ERQIKIWFQNRRMKWKK+NK K + AG P
Sbjct: 236 ERQIKIWFQNRRMKWKKDNKLKSMSMAAAGGAFRP 270
Score = 58 (25.5 bits), Expect = 7.9e-33, Sum P(2) = 7.9e-33
Identities = 18/54 (33%), Positives = 25/54 (46%)
Query: 1 MSSYFANSYMPDIKNGGVLPPEHHQQHHYGATVLPQNNGVEDPSMYDPRQVHHY 54
MSSYF NS+ NG P++ Q H+YG + SM+ R + Y
Sbjct: 1 MSSYFVNSFCGRYPNG----PDY-QLHNYGDHSSVSEQFRDSASMHSGRYGYGY 49
>UNIPROTKB|F1NMY3 [details] [associations]
symbol:HOXB8 "Homeobox protein Hox-B8" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007625
"grooming behavior" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0019233 "sensory perception of
pain" evidence=IEA] [GO:0021516 "dorsal spinal cord development"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000976 GeneTree:ENSGT00700000104332
OMA:MERAQEV EMBL:AADN02070205 EMBL:AADN02070206 EMBL:AADN02027051
EMBL:AADN02027057 EMBL:AADN02027058 EMBL:AADN02027059
EMBL:AADN02027047 EMBL:AADN02027048 EMBL:AADN02027049
EMBL:AADN02027050 EMBL:AADN02027052 EMBL:AADN02027053
EMBL:AADN02027054 EMBL:AADN02027055 EMBL:AADN02027056
EMBL:AADN02027060 EMBL:AADN02027061 EMBL:AADN02027062
EMBL:AADN02027063 EMBL:AADN02027064 EMBL:AADN02027065
EMBL:AADN02027066 EMBL:AADN02027067 EMBL:AADN02027068
EMBL:AADN02027069 EMBL:AADN02070203 EMBL:AADN02070204
EMBL:AADN02073361 IPI:IPI00572938 Ensembl:ENSGALT00000028037
Uniprot:F1NMY3
Length = 240
Score = 318 (117.0 bits), Expect = 1.0e-32, Sum P(2) = 1.0e-32
Identities = 63/85 (74%), Positives = 72/85 (84%)
Query: 220 TSASLPSP--LYPWMRSQFE-RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALC 276
+S PSP L+PWMR Q R+RGRQTY+RYQTLELEKEF FN YLTR+RRIE++HAL
Sbjct: 123 SSEQSPSPTQLFPWMRPQAAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALG 182
Query: 277 LTERQIKIWFQNRRMKWKKENKSKD 301
LTERQ+KIWFQNRRMKWKKEN +KD
Sbjct: 183 LTERQVKIWFQNRRMKWKKEN-NKD 206
Score = 55 (24.4 bits), Expect = 1.0e-32, Sum P(2) = 1.0e-32
Identities = 30/112 (26%), Positives = 43/112 (38%)
Query: 1 MSSYFANSYMPDIKNGGVLPPEHHQ---QHHYGA--TVL--PQNNGV-EDPSMYDPRQVH 52
MSSYF NS K G L P ++ G TV+ P G + P+ ++ +
Sbjct: 1 MSSYFVNSLFSKYKTGDSLRPNYYDCGFAQDLGGRPTVVYGPSTGGTFQHPTQI--QEFY 58
Query: 53 H----YGQVPNNGQPV----HGMPYPRFPPYDRMDIRNAAYYGAHEGGMEQY 96
H P P HG P F YD ++ + + A E + QY
Sbjct: 59 HGASSLSSSPYQQNPCAVACHGDP-SNFYGYD--PLQRQSLFSAQESDLVQY 107
>UNIPROTKB|P31268 [details] [associations]
symbol:HOXA7 "Homeobox protein Hox-A7" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
[GO:0048863 "stem cell differentiation" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0001525
"angiogenesis" evidence=IEP] [GO:0043565 "sequence-specific DNA
binding" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0005634 "nucleus"
evidence=IC] [GO:0002686 "negative regulation of leukocyte
migration" evidence=IDA] [GO:0045656 "negative regulation of
monocyte differentiation" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0001953 "negative regulation of cell-matrix
adhesion" evidence=IDA] [GO:0045617 "negative regulation of
keratinocyte differentiation" evidence=IDA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 EMBL:CH471073 GO:GO:0043565 GO:GO:0045944
GO:GO:0048863 GO:GO:0002686 GO:GO:0003700 GO:GO:0006351
GO:GO:0001525 EMBL:CH236948 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 HOGENOM:HOG000231181 GO:GO:0000122
GO:GO:0001953 GO:GO:0048704 eggNOG:NOG238660 EMBL:AC004080
HOVERGEN:HBG016849 CTD:3204 KO:K09307 EMBL:AF026397 EMBL:AJ005814
EMBL:AF032095 EMBL:X84803 EMBL:X84804 EMBL:U92543 IPI:IPI00010743
PIR:S15536 RefSeq:NP_008827.2 UniGene:Hs.610216 UniGene:Hs.660918
ProteinModelPortal:P31268 SMR:P31268 IntAct:P31268 STRING:P31268
PhosphoSite:P31268 DMDM:311033439 PRIDE:P31268 DNASU:3204
Ensembl:ENST00000242159 GeneID:3204 KEGG:hsa:3204 UCSC:uc003sys.3
GeneCards:GC07M027193 HGNC:HGNC:5108 MIM:142950 neXtProt:NX_P31268
PharmGKB:PA29385 InParanoid:P31268 OMA:EHKDEGP OrthoDB:EOG4C87V5
PhylomeDB:P31268 GenomeRNAi:3204 NextBio:12748 ArrayExpress:P31268
Bgee:P31268 CleanEx:HS_HOXA7 Genevestigator:P31268
GermOnline:ENSG00000122592 GO:GO:0045617 GO:GO:0045656
Uniprot:P31268
Length = 230
Score = 357 (130.7 bits), Expect = 1.1e-32, P = 1.1e-32
Identities = 69/82 (84%), Positives = 73/82 (89%)
Query: 228 LYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWMRS +RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF
Sbjct: 119 IYPWMRSSGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 178
Query: 287 QNRRMKWKKENKSKDGGSDAGS 308
QNRRMKWKKE+K D G A +
Sbjct: 179 QNRRMKWKKEHK--DEGPTAAA 198
>UNIPROTKB|E1B7T2 [details] [associations]
symbol:LOC100848736 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048704 OMA:PEQQYKS
GeneTree:ENSGT00700000104332 EMBL:DAAA02010938 IPI:IPI00708268
Ensembl:ENSBTAT00000033679 Uniprot:E1B7T2
Length = 249
Score = 336 (123.3 bits), Expect = 1.3e-32, Sum P(2) = 1.3e-32
Identities = 68/104 (65%), Positives = 74/104 (71%)
Query: 220 TSASLPSPLYPWMRSQ---------FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIE 270
T SP+YPWM+ +RGRQTYTRYQTLELEKEFHFNRYLTRRRRIE
Sbjct: 128 TDRKYTSPVYPWMQRMNSCAGAVYGSHGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIE 187
Query: 271 IAHALCLTERQIKIWFQNRRMKWKKENKSKDGGSDAGSDITPAT 314
IA+ALCLTERQIKIWFQNRRMKWKKENK + +G D T
Sbjct: 188 IANALCLTERQIKIWFQNRRMKWKKENKLINSTQPSGEDAEAKT 231
Score = 36 (17.7 bits), Expect = 1.3e-32, Sum P(2) = 1.3e-32
Identities = 7/11 (63%), Positives = 7/11 (63%)
Query: 1 MSSYFANSYMP 11
MSSYF N P
Sbjct: 1 MSSYFVNPTFP 11
>UNIPROTKB|F1SHT4 [details] [associations]
symbol:HOXA7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048863 "stem cell
differentiation" evidence=IEA] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045656 "negative regulation of monocyte
differentiation" evidence=IEA] [GO:0045617 "negative regulation of
keratinocyte differentiation" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0002686 "negative regulation of
leukocyte migration" evidence=IEA] [GO:0001953 "negative regulation
of cell-matrix adhesion" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0045944 GO:GO:0048863
GO:GO:0002686 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0000122 GO:GO:0001953
GO:GO:0048704 OMA:EHKDEGP GO:GO:0045617 GO:GO:0045656 EMBL:CU570959
Ensembl:ENSSSCT00000018182 Uniprot:F1SHT4
Length = 241
Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
Identities = 66/74 (89%), Positives = 70/74 (94%)
Query: 228 LYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWMRS +RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF
Sbjct: 119 IYPWMRSSGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 178
Query: 287 QNRRMKWKKENKSK 300
QNRRMKWKKE+K +
Sbjct: 179 QNRRMKWKKEHKDE 192
>UNIPROTKB|I3LKE3 [details] [associations]
symbol:HOXA7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
KO:K09307 EMBL:CU570959 RefSeq:XP_003134888.1
Ensembl:ENSSSCT00000030592 GeneID:100519456 KEGG:ssc:100519456
Uniprot:I3LKE3
Length = 234
Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
Identities = 66/74 (89%), Positives = 70/74 (94%)
Query: 228 LYPWMRSQF-ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
+YPWMRS +RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF
Sbjct: 119 IYPWMRSSGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 178
Query: 287 QNRRMKWKKENKSK 300
QNRRMKWKKE+K +
Sbjct: 179 QNRRMKWKKEHKDE 192
>UNIPROTKB|Q5YLH5 [details] [associations]
symbol:HOXA6 "Homeobox protein Hox-A6" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 eggNOG:NOG238660 HOVERGEN:HBG016849 EMBL:AY307380
IPI:IPI00598309 RefSeq:NP_001026158.1 RefSeq:XP_003640784.1
UniGene:Gga.22376 ProteinModelPortal:Q5YLH5 SMR:Q5YLH5
GeneID:100857163 GeneID:420630 KEGG:gga:100857163 KEGG:gga:420630
CTD:3203 KO:K09306 NextBio:20823516 Uniprot:Q5YLH5
Length = 231
Score = 335 (123.0 bits), Expect = 1.6e-32, Sum P(2) = 1.6e-32
Identities = 70/105 (66%), Positives = 76/105 (72%)
Query: 220 TSASLPSPLYPWMRSQ---------FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIE 270
T SP+YPWM+ +RGRQTYTRYQTLELEKEFHFNRYLTRRRRIE
Sbjct: 126 TDRKYTSPVYPWMQRMNSCAGTVYGAHGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIE 185
Query: 271 IAHALCLTERQIKIWFQNRRMKWKKENKSKDGGSDAGSDITPATS 315
IA+ALCLTERQIKIWFQNRRMKWKKENK + + GSD T S
Sbjct: 186 IANALCLTERQIKIWFQNRRMKWKKENKFINS-TQPGSDETEEKS 229
Score = 36 (17.7 bits), Expect = 1.6e-32, Sum P(2) = 1.6e-32
Identities = 7/11 (63%), Positives = 7/11 (63%)
Query: 1 MSSYFANSYMP 11
MSSYF N P
Sbjct: 1 MSSYFVNPTFP 11
>UNIPROTKB|E2R5W2 [details] [associations]
symbol:HOXA6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048704 CTD:3203 KO:K09306
OMA:PEQQYKS GeneTree:ENSGT00700000104332 EMBL:AAEX03009390
RefSeq:XP_854141.1 ProteinModelPortal:E2R5W2
Ensembl:ENSCAFT00000004729 GeneID:611383 KEGG:cfa:611383
NextBio:20896920 Uniprot:E2R5W2
Length = 233
Score = 335 (123.0 bits), Expect = 1.6e-32, Sum P(2) = 1.6e-32
Identities = 67/99 (67%), Positives = 73/99 (73%)
Query: 220 TSASLPSPLYPWMRSQ---------FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIE 270
T SP+YPWM+ +RGRQTYTRYQTLELEKEFHFNRYLTRRRRIE
Sbjct: 128 TDRKYTSPVYPWMQRMNSCAGAVYGSHGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIE 187
Query: 271 IAHALCLTERQIKIWFQNRRMKWKKENKSKDGGSDAGSD 309
IA+ALCLTERQIKIWFQNRRMKWKKENK + +G D
Sbjct: 188 IANALCLTERQIKIWFQNRRMKWKKENKLINSTQPSGED 226
Score = 36 (17.7 bits), Expect = 1.6e-32, Sum P(2) = 1.6e-32
Identities = 7/11 (63%), Positives = 7/11 (63%)
Query: 1 MSSYFANSYMP 11
MSSYF N P
Sbjct: 1 MSSYFVNPTFP 11
>UNIPROTKB|F1SHT3 [details] [associations]
symbol:HOXA6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048704 KO:K09306 OMA:PEQQYKS
GeneTree:ENSGT00700000104332 EMBL:CU570959 RefSeq:XP_003134887.1
Ensembl:ENSSSCT00000018183 GeneID:100519284 KEGG:ssc:100519284
Uniprot:F1SHT3
Length = 233
Score = 335 (123.0 bits), Expect = 1.6e-32, Sum P(2) = 1.6e-32
Identities = 67/99 (67%), Positives = 73/99 (73%)
Query: 220 TSASLPSPLYPWMRSQ---------FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIE 270
T SP+YPWM+ +RGRQTYTRYQTLELEKEFHFNRYLTRRRRIE
Sbjct: 128 TDRKYTSPVYPWMQRMNSCAGAVYGSHGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIE 187
Query: 271 IAHALCLTERQIKIWFQNRRMKWKKENKSKDGGSDAGSD 309
IA+ALCLTERQIKIWFQNRRMKWKKENK + +G D
Sbjct: 188 IANALCLTERQIKIWFQNRRMKWKKENKLINSTQPSGED 226
Score = 36 (17.7 bits), Expect = 1.6e-32, Sum P(2) = 1.6e-32
Identities = 7/11 (63%), Positives = 7/11 (63%)
Query: 1 MSSYFANSYMP 11
MSSYF N P
Sbjct: 1 MSSYFVNPTFP 11
>MGI|MGI:96178 [details] [associations]
symbol:Hoxa6 "homeobox A6" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IGI;IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IMP] [GO:0048706 "embryonic skeletal system development"
evidence=IGI] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 MGI:MGI:96178 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
HOGENOM:HOG000231181 GO:GO:0048704 HOVERGEN:HBG016849 CTD:3203
KO:K09306 eggNOG:NOG305812 OMA:PEQQYKS OrthoDB:EOG4C5CKB
EMBL:AF247663 EMBL:M11988 IPI:IPI00132603 PIR:A24779
RefSeq:NP_034584.1 UniGene:Mm.222030 ProteinModelPortal:P09092
SMR:P09092 STRING:P09092 PhosphoSite:P09092 PRIDE:P09092
Ensembl:ENSMUST00000062829 GeneID:15403 KEGG:mmu:15403
InParanoid:P09092 NextBio:288106 Bgee:P09092 CleanEx:MM_HOXA6
Genevestigator:P09092 GermOnline:ENSMUSG00000043219 Uniprot:P09092
Length = 232
Score = 334 (122.6 bits), Expect = 2.1e-32, Sum P(2) = 2.1e-32
Identities = 67/99 (67%), Positives = 73/99 (73%)
Query: 220 TSASLPSPLYPWMRSQ---------FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIE 270
T SP+YPWM+ +RGRQTYTRYQTLELEKEFHFNRYLTRRRRIE
Sbjct: 127 TDRKYTSPVYPWMQRMNSCAGAVYGSHGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIE 186
Query: 271 IAHALCLTERQIKIWFQNRRMKWKKENKSKDGGSDAGSD 309
IA+ALCLTERQIKIWFQNRRMKWKKENK + +G D
Sbjct: 187 IANALCLTERQIKIWFQNRRMKWKKENKLINSTQASGED 225
Score = 36 (17.7 bits), Expect = 2.1e-32, Sum P(2) = 2.1e-32
Identities = 7/11 (63%), Positives = 7/11 (63%)
Query: 1 MSSYFANSYMP 11
MSSYF N P
Sbjct: 1 MSSYFVNPTFP 11
>RGD|1590236 [details] [associations]
symbol:Hoxa6 "homeobox A6" species:10116 "Rattus norvegicus"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=ISO] [GO:0048706 "embryonic skeletal system development"
evidence=ISO] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 RGD:1590236 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 CTD:3203
KO:K09306 OMA:PEQQYKS GeneTree:ENSGT00700000104332 EMBL:CH474011
EMBL:AC122669 RefSeq:NP_001178016.1 RefSeq:XP_003749802.1
RefSeq:XP_003752227.1 UniGene:Rn.213374 Ensembl:ENSRNOT00000008542
GeneID:100909604 GeneID:100911511 GeneID:685732 KEGG:rno:100909604
KEGG:rno:100911511 KEGG:rno:685732 NextBio:730342 Uniprot:G3V6T4
Length = 233
Score = 334 (122.6 bits), Expect = 2.1e-32, Sum P(2) = 2.1e-32
Identities = 67/99 (67%), Positives = 73/99 (73%)
Query: 220 TSASLPSPLYPWMRSQ---------FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIE 270
T SP+YPWM+ +RGRQTYTRYQTLELEKEFHFNRYLTRRRRIE
Sbjct: 128 TDRKYTSPVYPWMQRMNSCAGAVYGSHGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIE 187
Query: 271 IAHALCLTERQIKIWFQNRRMKWKKENKSKDGGSDAGSD 309
IA+ALCLTERQIKIWFQNRRMKWKKENK + +G D
Sbjct: 188 IANALCLTERQIKIWFQNRRMKWKKENKLINSTQASGED 226
Score = 36 (17.7 bits), Expect = 2.1e-32, Sum P(2) = 2.1e-32
Identities = 7/11 (63%), Positives = 7/11 (63%)
Query: 1 MSSYFANSYMP 11
MSSYF N P
Sbjct: 1 MSSYFVNPTFP 11
>ZFIN|ZDB-GENE-000823-7 [details] [associations]
symbol:hoxb6b "homeo box B6b" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-000823-7 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 HOGENOM:HOG000231181
HOVERGEN:HBG016849 eggNOG:NOG305812 EMBL:AL645798 OrthoDB:EOG4G7C0G
EMBL:AF071254 EMBL:DQ060548 EMBL:Y14532 IPI:IPI00481961
UniGene:Dr.59927 ProteinModelPortal:Q9YGT4 SMR:Q9YGT4 STRING:Q9YGT4
InParanoid:Q9YGT4 ArrayExpress:Q9YGT4 Uniprot:Q9YGT4
Length = 224
Score = 326 (119.8 bits), Expect = 2.1e-32, Sum P(2) = 2.1e-32
Identities = 62/82 (75%), Positives = 69/82 (84%)
Query: 226 SPLYPWMRSQFE--------RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 277
+P+YPWM+ +RGRQTYTR+QTLELEKEFHFNRYLTRRRRIEI+HALCL
Sbjct: 127 TPVYPWMQRMNSCNGMPGSTGRRGRQTYTRFQTLELEKEFHFNRYLTRRRRIEISHALCL 186
Query: 278 TERQIKIWFQNRRMKWKKENKS 299
TERQIKIWFQNRRMKWKKENK+
Sbjct: 187 TERQIKIWFQNRRMKWKKENKA 208
Score = 44 (20.5 bits), Expect = 2.1e-32, Sum P(2) = 2.1e-32
Identities = 10/17 (58%), Positives = 10/17 (58%)
Query: 1 MSSYFANSYMPDIKNGG 17
MSSYF NS P GG
Sbjct: 1 MSSYFVNSTFPVSLPGG 17
>UNIPROTKB|P31267 [details] [associations]
symbol:HOXA6 "Homeobox protein Hox-A6" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0009952 EMBL:CH471073 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 EMBL:CH236948 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
HOGENOM:HOG000231181 GO:GO:0048704 EMBL:AC004080 HOVERGEN:HBG016849
CTD:3203 KO:K09306 EMBL:BC069497 EMBL:BC104915 EMBL:BC104917
IPI:IPI00010742 PIR:S15538 RefSeq:NP_076919.1 UniGene:Hs.679517
ProteinModelPortal:P31267 SMR:P31267 STRING:P31267
PhosphoSite:P31267 DMDM:17378385 PRIDE:P31267 DNASU:3203
Ensembl:ENST00000222728 GeneID:3203 KEGG:hsa:3203 UCSC:uc003syo.2
GeneCards:GC07M027185 HGNC:HGNC:5107 HPA:HPA004203 MIM:142951
neXtProt:NX_P31267 PharmGKB:PA29384 eggNOG:NOG305812
InParanoid:P31267 OMA:PEQQYKS OrthoDB:EOG4C5CKB PhylomeDB:P31267
GenomeRNAi:3203 NextBio:12744 Bgee:P31267 CleanEx:HS_HOXA6
Genevestigator:P31267 GermOnline:ENSG00000106006 Uniprot:P31267
Length = 233
Score = 333 (122.3 bits), Expect = 2.6e-32, Sum P(2) = 2.6e-32
Identities = 66/93 (70%), Positives = 72/93 (77%)
Query: 226 SPLYPWMRSQ---------FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALC 276
SP+YPWM+ +RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIA+ALC
Sbjct: 134 SPVYPWMQRMNSCAGAVYGSHGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIANALC 193
Query: 277 LTERQIKIWFQNRRMKWKKENKSKDGGSDAGSD 309
LTERQIKIWFQNRRMKWKKENK + +G D
Sbjct: 194 LTERQIKIWFQNRRMKWKKENKLINSTQPSGED 226
Score = 36 (17.7 bits), Expect = 2.6e-32, Sum P(2) = 2.6e-32
Identities = 7/11 (63%), Positives = 7/11 (63%)
Query: 1 MSSYFANSYMP 11
MSSYF N P
Sbjct: 1 MSSYFVNPTFP 11
>ZFIN|ZDB-GENE-980526-70 [details] [associations]
symbol:hoxb5a "homeo box B5a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007420 "brain development" evidence=IMP] [GO:0001708 "cell
fate specification" evidence=IMP] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-980526-70 GO:GO:0005634
GO:GO:0001708 GO:GO:0007420 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104189 HOVERGEN:HBG016849
eggNOG:NOG236516 HOGENOM:HOG000231178 KO:K09305 EMBL:AL645782
EMBL:X12802 EMBL:X68248 EMBL:BC071493 EMBL:DQ060540 EMBL:X07381
IPI:IPI00493376 PIR:S03671 RefSeq:NP_571176.2 UniGene:Dr.35792
ProteinModelPortal:P09014 SMR:P09014 Ensembl:ENSDART00000025449
GeneID:30317 KEGG:dre:30317 CTD:30317 InParanoid:P09014 OMA:APQIFPW
OrthoDB:EOG45MN66 NextBio:20806756 Bgee:P09014 Uniprot:P09014
Length = 275
Score = 318 (117.0 bits), Expect = 2.6e-32, Sum P(2) = 2.6e-32
Identities = 66/102 (64%), Positives = 72/102 (70%)
Query: 220 TSASLPSPLYPWMRSQF--------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEI 271
TS ++PWMR + KR R YTRYQTLELEKEFHFNRYLTRRRRIEI
Sbjct: 174 TSDGQAPQIFPWMRKLHISHDMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEI 233
Query: 272 AHALCLTERQIKIWFQNRRMKWKKENKSKDGG-SDAGSDITP 312
AHALCL+ERQIKIWFQNRRMKWKK+NK K + AGS P
Sbjct: 234 AHALCLSERQIKIWFQNRRMKWKKDNKLKSMSLATAGSAFQP 275
Score = 51 (23.0 bits), Expect = 2.6e-32, Sum P(2) = 2.6e-32
Identities = 17/55 (30%), Positives = 26/55 (47%)
Query: 1 MSSYFANSYMPDIKNGGVLPPEHHQQHHYGATVLPQNNGVEDP-SMYDPRQVHHY 54
MSSYF NS+ NG P++ Q +YG + N D +M+ ++Y
Sbjct: 1 MSSYFVNSFSGRYPNG----PDY-QLLNYGTSSSAMNASYRDSGTMHSGSYGYNY 50
>ZFIN|ZDB-GENE-990415-114 [details] [associations]
symbol:hoxc8a "homeo box C8a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0035118
"embryonic pectoral fin morphogenesis" evidence=IGI] [GO:0031017
"exocrine pancreas development" evidence=IGI] [GO:0031018
"endocrine pancreas development" evidence=IGI] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-990415-114
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
HSSP:P02833 HOGENOM:HOG000231181 GO:GO:0031018 GO:GO:0035118
GO:GO:0031017 HOVERGEN:HBG016849 GeneTree:ENSGT00700000104332
eggNOG:NOG314669 OrthoDB:EOG4H464V KO:K09308 EMBL:BX005254
EMBL:BC080255 EMBL:DQ060555 EMBL:Y14544 IPI:IPI00489401
RefSeq:NP_001005771.1 UniGene:Dr.132201 ProteinModelPortal:Q68EH7
SMR:Q68EH7 STRING:Q68EH7 Ensembl:ENSDART00000103139 GeneID:449648
KEGG:dre:449648 CTD:449648 InParanoid:A2BE64 OMA:HHGTSSI
NextBio:20832749 Bgee:Q68EH7 Uniprot:Q68EH7
Length = 250
Score = 309 (113.8 bits), Expect = 2.6e-32, Sum P(2) = 2.6e-32
Identities = 59/80 (73%), Positives = 68/80 (85%)
Query: 223 SLPSPLYPWMRSQFE-RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQ 281
S PS ++PWMR R+ GRQTY+RYQTLELEKEF FN YLTR+RRIE++HAL LTERQ
Sbjct: 133 SSPSLMFPWMRPHAPGRRNGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALSLTERQ 192
Query: 282 IKIWFQNRRMKWKKENKSKD 301
+KIWFQNRRMKWKKEN +KD
Sbjct: 193 VKIWFQNRRMKWKKEN-NKD 211
Score = 60 (26.2 bits), Expect = 2.6e-32, Sum P(2) = 2.6e-32
Identities = 31/129 (24%), Positives = 45/129 (34%)
Query: 1 MSSYFANSYMPDIKNGGVLPPEHHQ----QHHYGATVLPQNNGVEDPSMYDP----RQVH 52
MSSYF N K G L P ++ Q + L +G P P +
Sbjct: 1 MSSYFVNPLFSKYKGGETLEPTYYDCRFPQSVARSHTLVYGHGAAAPGFQHPSHHVQDFF 60
Query: 53 HYGQ--VPNNGQPVHGMPYP------RFPPYDRMDIRNAAYYGAHEGGMEQYPRPDSPSM 104
H+G + N G + +F Y+ + R Y E + QYP S +
Sbjct: 61 HHGTTGISNPGYQQNPCALACHGDATKFYGYEALP-RQPLYGTQQEATLAQYPDCKSSNS 119
Query: 105 GHMGPQNGH 113
+ G GH
Sbjct: 120 TNPGEGQGH 128
>UNIPROTKB|E9PT77 [details] [associations]
symbol:LOC100360577 "Protein LOC100360577" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:2321880
GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0048704 KO:K09304 OMA:PPGKPQT
UniGene:Rn.224463 EMBL:AC122669 IPI:IPI00382378
RefSeq:XP_002729358.1 RefSeq:XP_003749796.1
Ensembl:ENSRNOT00000038775 GeneID:100360577 GeneID:100912525
KEGG:rno:100360577 KEGG:rno:100912525 ArrayExpress:E9PT77
Uniprot:E9PT77
Length = 285
Score = 280 (103.6 bits), Expect = 2.6e-32, Sum P(2) = 2.6e-32
Identities = 51/62 (82%), Positives = 55/62 (88%)
Query: 237 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
E KR R YTR Q LELEKEFHFNRYLTRRRRIEIAH LCL+ERQ+KIWFQNRRMKWKK+
Sbjct: 179 EPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKD 238
Query: 297 NK 298
+K
Sbjct: 239 HK 240
Score = 89 (36.4 bits), Expect = 2.6e-32, Sum P(2) = 2.6e-32
Identities = 22/69 (31%), Positives = 29/69 (42%)
Query: 70 PRFPPYDRMDIRNAAYYG-AHEGGMEQYPRPDS-PSMGHMGPQNGHQTPVVYASCKLQAA 127
P+FPP++ G GG YPRP S P + P QTP YA + +
Sbjct: 15 PKFPPFEEFAPHGGPGGGDGGVGGGPGYPRPQSSPHLPAPNPHAARQTPAYYAPRAREPS 74
Query: 128 VGNGIIPGP 136
G+ P P
Sbjct: 75 YHGGLYPAP 83
>MGI|MGI:96176 [details] [associations]
symbol:Hoxa4 "homeobox A4" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IDA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IGI;IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IGI;IMP] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 MGI:MGI:96176 GO:GO:0005634
GO:GO:0009952 GO:GO:0003677 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 GO:GO:0048704
KO:K09304 HOGENOM:HOG000231179 HOVERGEN:HBG016849 CTD:3201
eggNOG:NOG257177 OrthoDB:EOG4GTKF7 EMBL:S70444 EMBL:S67058
EMBL:AK076098 EMBL:X66861 EMBL:X13538 EMBL:X17346 EMBL:M27432
EMBL:M13813 IPI:IPI00128156 PIR:A43556 RefSeq:NP_032291.1
UniGene:Mm.439647 ProteinModelPortal:P06798 SMR:P06798
STRING:P06798 PhosphoSite:P06798 PRIDE:P06798
Ensembl:ENSMUST00000101395 GeneID:15401 KEGG:mmu:15401
UCSC:uc009byf.1 InParanoid:P06798 NextBio:288098 Bgee:P06798
CleanEx:MM_HOXA4 Genevestigator:P06798
GermOnline:ENSMUSG00000000942 Uniprot:P06798
Length = 285
Score = 285 (105.4 bits), Expect = 3.4e-32, Sum P(2) = 3.4e-32
Identities = 62/103 (60%), Positives = 71/103 (68%)
Query: 228 LYPWMR--------SQF---ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALC 276
+YPWM+ S + E KR R YTR Q LELEKEFHFNRYLTRRRRIEIAH LC
Sbjct: 159 VYPWMKKIHVSAVNSSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLC 218
Query: 277 LTERQIKIWFQNRRMKWKKENK---SKDGGSDAGSDITPATSP 316
L+ERQ+KIWFQNRRMKWKK++K +K S+ S PA P
Sbjct: 219 LSERQVKIWFQNRRMKWKKDHKLPNTKMRSSNTAS--APAGPP 259
Score = 83 (34.3 bits), Expect = 3.4e-32, Sum P(2) = 3.4e-32
Identities = 21/69 (30%), Positives = 28/69 (40%)
Query: 70 PRFPPYDRMDIRNAAYYG-AHEGGMEQYPRPDS-PSMGHMGPQNGHQTPVVYASCKLQAA 127
P+FPP++ G GG YPRP S P + P Q P YA + +
Sbjct: 15 PKFPPFEEFAPHGGPGGGDGAVGGGPGYPRPQSAPHLPAPNPHAARQPPAYYAPRAREPS 74
Query: 128 VGNGIIPGP 136
G+ P P
Sbjct: 75 YPGGLYPAP 83
>UNIPROTKB|Q9YH13 [details] [associations]
symbol:HOXC8 "Homeobox protein Hox-C8" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 HOVERGEN:HBG016849 KO:K09308 EMBL:X94179
IPI:IPI00581117 RefSeq:NP_990224.1 UniGene:Gga.413
ProteinModelPortal:Q9YH13 SMR:Q9YH13 GeneID:395711 KEGG:gga:395711
CTD:3224 NextBio:20815781 Uniprot:Q9YH13
Length = 242
Score = 306 (112.8 bits), Expect = 4.3e-32, Sum P(2) = 4.3e-32
Identities = 59/80 (73%), Positives = 68/80 (85%)
Query: 223 SLPSPLYPWMRSQFE-RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQ 281
S PS ++PWMR R+ GRQTY+RYQTLELEKEF FN YLTR+RRIE++HAL LTERQ
Sbjct: 133 SSPSLMFPWMRPHAPGRRSGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQ 192
Query: 282 IKIWFQNRRMKWKKENKSKD 301
+KIWFQNRRMKWKKEN +KD
Sbjct: 193 VKIWFQNRRMKWKKEN-NKD 211
Score = 61 (26.5 bits), Expect = 4.3e-32, Sum P(2) = 4.3e-32
Identities = 31/129 (24%), Positives = 47/129 (36%)
Query: 1 MSSYFANSYMPDIKNGGVLPPEHHQ----QHHYGATVLPQNNGVEDPSMYDP----RQVH 52
MSSYF N K G L P ++ Q + L G P+ P ++
Sbjct: 1 MSSYFVNPLFSKYKGGESLEPTYYDCRFPQSVSRSHALVYGPGTTAPTFQHPSHHVQEFF 60
Query: 53 HYG--QVPNNGQPVHGMPYP------RFPPYDRMDIRNAAYYGAHEGGMEQYPRPDSPSM 104
H+G + N+G + +F Y+ + R + Y E + QYP S S
Sbjct: 61 HHGTSSISNSGYQQNPCALACHGDASKFYGYEALP-RQSLYGAQQETTVVQYPDCKSSSN 119
Query: 105 GHMGPQNGH 113
+ GH
Sbjct: 120 SNSSEGQGH 128
>ZFIN|ZDB-GENE-000823-9 [details] [associations]
symbol:hoxa5a "homeo box A5a" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-000823-9 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104189
EMBL:CR382300 HOVERGEN:HBG016849 EMBL:AF071247 EMBL:DQ060534
IPI:IPI00485489 RefSeq:NP_571615.1 UniGene:Dr.134275
ProteinModelPortal:Q9YGT6 SMR:Q9YGT6 Ensembl:ENSDART00000003506
GeneID:58055 KEGG:dre:58055 CTD:58055 eggNOG:NOG236516
HOGENOM:HOG000231178 InParanoid:Q9YGT6 OMA:YRDSASM
OrthoDB:EOG49S677 NextBio:20892319 ArrayExpress:Q9YGT6 Bgee:Q9YGT6
Uniprot:Q9YGT6
Length = 265
Score = 314 (115.6 bits), Expect = 6.9e-32, Sum P(2) = 6.9e-32
Identities = 65/95 (68%), Positives = 69/95 (72%)
Query: 228 LYPWMRSQF---------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWMR E KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAH LCL+
Sbjct: 171 IYPWMRKLHISHDNLAGPEGKRPRTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHTLCLS 230
Query: 279 ERQIKIWFQNRRMKWKKENKSKDGG-SDAGSDITP 312
ERQIKIWFQNRRMKWKK+NK K + AGS P
Sbjct: 231 ERQIKIWFQNRRMKWKKDNKLKSMNMAAAGSGYRP 265
Score = 51 (23.0 bits), Expect = 6.9e-32, Sum P(2) = 6.9e-32
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 1 MSSYFANSYMPDIKNGGVLPPEHHQQHH 28
MSSYF NS+ NG P ++ H+
Sbjct: 1 MSSYFVNSFCGRYPNGVDYPLHNYGDHN 28
>UNIPROTKB|E1BZJ6 [details] [associations]
symbol:HOXB5 "Homeobox protein Hox-B5" species:9031 "Gallus
gallus" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0045446 "endothelial cell differentiation"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104189 EMBL:AADN02070205 EMBL:AADN02070206
IPI:IPI00588353 Ensembl:ENSGALT00000021590 ArrayExpress:E1BZJ6
Uniprot:E1BZJ6
Length = 265
Score = 310 (114.2 bits), Expect = 1.4e-31, Sum P(2) = 1.4e-31
Identities = 60/75 (80%), Positives = 63/75 (84%)
Query: 239 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+ERQIKIWFQNRRMKWKK+NK
Sbjct: 191 KRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNK 250
Query: 299 SKDGG-SDAGSDITP 312
K + AGS P
Sbjct: 251 LKSMSLASAGSAFQP 265
Score = 52 (23.4 bits), Expect = 1.4e-31, Sum P(2) = 1.4e-31
Identities = 19/55 (34%), Positives = 26/55 (47%)
Query: 1 MSSYFANSYMPDIKNGGVLPPEHHQQHHYGATVLPQNNGVEDPS-MYDPRQVHHY 54
MSSYF NS+ NG P++ Q +YG T N D S M+ ++Y
Sbjct: 1 MSSYFVNSFSGRYPNG----PDY-QLLNYG-TSSSMNGSYRDSSTMHSSSYGYNY 49
>UNIPROTKB|E1BI54 [details] [associations]
symbol:HOXC8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048705 "skeletal
system morphogenesis" evidence=IEA] [GO:0030182 "neuron
differentiation" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0030182
GO:GO:0009952 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0000976
GO:GO:0048705 GeneTree:ENSGT00700000104332 KO:K09308 OMA:HHGTSSI
CTD:3224 EMBL:DAAA02012840 IPI:IPI00711888 RefSeq:XP_002687278.1
RefSeq:XP_002704291.1 ProteinModelPortal:E1BI54 SMR:E1BI54
Ensembl:ENSBTAT00000016117 GeneID:100295249 KEGG:bta:100295249
Uniprot:E1BI54
Length = 242
Score = 306 (112.8 bits), Expect = 1.8e-31, Sum P(2) = 1.8e-31
Identities = 59/80 (73%), Positives = 68/80 (85%)
Query: 223 SLPSPLYPWMRSQFE-RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQ 281
S PS ++PWMR R+ GRQTY+RYQTLELEKEF FN YLTR+RRIE++HAL LTERQ
Sbjct: 133 SSPSLMFPWMRPHAPGRRSGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQ 192
Query: 282 IKIWFQNRRMKWKKENKSKD 301
+KIWFQNRRMKWKKEN +KD
Sbjct: 193 VKIWFQNRRMKWKKEN-NKD 211
Score = 55 (24.4 bits), Expect = 1.8e-31, Sum P(2) = 1.8e-31
Identities = 32/130 (24%), Positives = 47/130 (36%)
Query: 1 MSSYFANSYMPDIKNGGVLPPEHHQ---QHHYGAT-VLPQNNGVEDPSM----YDPRQVH 52
MSSYF N K G L P ++ G + L G P + +
Sbjct: 1 MSSYFVNPLFSKYKGGESLEPAYYDCRFPQSVGRSHALVYGPGGSAPGFQHASHHVQDFF 60
Query: 53 HYGQ--VPNNG---QPV----HGMPYPRFPPYDRMDIRNAAYYGAHEGGMEQYPRPDSPS 103
H+G + N+G P HG +F Y+ + R + Y E + QYP S +
Sbjct: 61 HHGTSGISNSGYQQNPCSLSCHG-DASKFYGYEALP-RQSLYGAQQEASVVQYPDCKSSA 118
Query: 104 MGHMGPQNGH 113
+ GH
Sbjct: 119 NTNSSEGQGH 128
>MGI|MGI:96198 [details] [associations]
symbol:Hoxc8 "homeobox C8" species:10090 "Mus musculus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IGI;IMP] [GO:0030182 "neuron differentiation"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048705 "skeletal system morphogenesis"
evidence=IGI;IMP] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 MGI:MGI:96198 GO:GO:0005634
GO:GO:0030182 GO:GO:0009952 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231181 GO:GO:0000122 GO:GO:0000976
GO:GO:0048705 HOVERGEN:HBG016849 GeneTree:ENSGT00700000104332
eggNOG:NOG314669 OrthoDB:EOG4H464V KO:K09308 OMA:HHGTSSI CTD:3224
EMBL:X07439 EMBL:X07646 EMBL:M35603 EMBL:X03659 IPI:IPI00132381
PIR:B25180 PIR:B36023 PIR:S13785 RefSeq:NP_034596.1 UniGene:Mm.6167
ProteinModelPortal:P09025 SMR:P09025 IntAct:P09025 MINT:MINT-210049
STRING:P09025 PhosphoSite:P09025 PRIDE:P09025 DNASU:15426
Ensembl:ENSMUST00000001703 GeneID:15426 KEGG:mmu:15426
UCSC:uc012aaf.1 InParanoid:P09025 NextBio:288178 Bgee:P09025
CleanEx:MM_HOXC8 Genevestigator:P09025
GermOnline:ENSMUSG00000001657 Uniprot:P09025
Length = 242
Score = 306 (112.8 bits), Expect = 1.8e-31, Sum P(2) = 1.8e-31
Identities = 59/80 (73%), Positives = 68/80 (85%)
Query: 223 SLPSPLYPWMRSQFE-RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQ 281
S PS ++PWMR R+ GRQTY+RYQTLELEKEF FN YLTR+RRIE++HAL LTERQ
Sbjct: 133 SSPSLMFPWMRPHAPGRRSGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQ 192
Query: 282 IKIWFQNRRMKWKKENKSKD 301
+KIWFQNRRMKWKKEN +KD
Sbjct: 193 VKIWFQNRRMKWKKEN-NKD 211
Score = 55 (24.4 bits), Expect = 1.8e-31, Sum P(2) = 1.8e-31
Identities = 32/130 (24%), Positives = 47/130 (36%)
Query: 1 MSSYFANSYMPDIKNGGVLPPEHHQ---QHHYGAT-VLPQNNGVEDPSM----YDPRQVH 52
MSSYF N K G L P ++ G + L G P + +
Sbjct: 1 MSSYFVNPLFSKYKGGESLEPAYYDCRFPQSVGRSHALVYGPGGSAPGFQHASHHVQDFF 60
Query: 53 HYGQ--VPNNG---QPV----HGMPYPRFPPYDRMDIRNAAYYGAHEGGMEQYPRPDSPS 103
H+G + N+G P HG +F Y+ + R + Y E + QYP S +
Sbjct: 61 HHGTSGISNSGYQQNPCSLSCHG-DASKFYGYEALP-RQSLYGAQQEASVVQYPDCKSSA 118
Query: 104 MGHMGPQNGH 113
+ GH
Sbjct: 119 NTNSSEGQGH 128
>RGD|2821 [details] [associations]
symbol:Hoxc8 "homeobox C8" species:10116 "Rattus norvegicus"
[GO:0000122 "negative regulation of transcription from RNA polymerase
II promoter" evidence=IEA] [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA] [GO:0030182
"neuron differentiation" evidence=IEA] [GO:0048705 "skeletal system
morphogenesis" evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 RGD:2821 GO:GO:0005634 GO:GO:0030182 GO:GO:0009952
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0000976 GO:GO:0048705
GeneTree:ENSGT00700000104332 KO:K09308 OMA:HHGTSSI CTD:3224
UniGene:Rn.91646 EMBL:AC116663 IPI:IPI00919307 RefSeq:NP_001170797.2
ProteinModelPortal:F1MAK7 SMR:F1MAK7 Ensembl:ENSRNOT00000031404
GeneID:24460 KEGG:rno:24460 NextBio:744549 Uniprot:F1MAK7
Length = 242
Score = 306 (112.8 bits), Expect = 1.8e-31, Sum P(2) = 1.8e-31
Identities = 59/80 (73%), Positives = 68/80 (85%)
Query: 223 SLPSPLYPWMRSQFE-RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQ 281
S PS ++PWMR R+ GRQTY+RYQTLELEKEF FN YLTR+RRIE++HAL LTERQ
Sbjct: 133 SSPSLMFPWMRPHAPGRRSGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQ 192
Query: 282 IKIWFQNRRMKWKKENKSKD 301
+KIWFQNRRMKWKKEN +KD
Sbjct: 193 VKIWFQNRRMKWKKEN-NKD 211
Score = 55 (24.4 bits), Expect = 1.8e-31, Sum P(2) = 1.8e-31
Identities = 32/130 (24%), Positives = 47/130 (36%)
Query: 1 MSSYFANSYMPDIKNGGVLPPEHHQ---QHHYGAT-VLPQNNGVEDPSM----YDPRQVH 52
MSSYF N K G L P ++ G + L G P + +
Sbjct: 1 MSSYFVNPLFSKYKGGESLEPAYYDCRFPQSVGRSHALVYGPGGSAPGFQHASHHVQDFF 60
Query: 53 HYGQ--VPNNG---QPV----HGMPYPRFPPYDRMDIRNAAYYGAHEGGMEQYPRPDSPS 103
H+G + N+G P HG +F Y+ + R + Y E + QYP S +
Sbjct: 61 HHGTSGISNSGYQQNPCSLSCHG-DASKFYGYEALP-RQSLYGAQQEASVVQYPDCKSSA 118
Query: 104 MGHMGPQNGH 113
+ GH
Sbjct: 119 NTNSSEGQGH 128
>ZFIN|ZDB-GENE-000823-6 [details] [associations]
symbol:hoxb5b "homeo box B5b" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0010002 "cardioblast differentiation" evidence=IMP] [GO:0007420
"brain development" evidence=IMP] [GO:0001708 "cell fate
specification" evidence=IMP] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-000823-6 GO:GO:0005634
GO:GO:0001708 GO:GO:0007420 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0010002 GeneTree:ENSGT00700000104189
HOVERGEN:HBG016849 eggNOG:NOG236516 HOGENOM:HOG000231178
EMBL:AL645798 OrthoDB:EOG45MN66 EMBL:AF071253 EMBL:BC078285
EMBL:DQ060547 EMBL:X12803 EMBL:Y14526 IPI:IPI00489481
RefSeq:NP_571612.2 UniGene:Dr.75783 ProteinModelPortal:P09013
SMR:P09013 Ensembl:ENSDART00000076161 GeneID:58052 KEGG:dre:58052
CTD:58052 InParanoid:P09013 NextBio:20892316 Bgee:P09013
Uniprot:P09013
Length = 276
Score = 312 (114.9 bits), Expect = 2.3e-31, Sum P(2) = 2.3e-31
Identities = 63/90 (70%), Positives = 69/90 (76%)
Query: 228 LYPWMRSQF--------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
++PWMR + KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+E
Sbjct: 183 IFPWMRKLHISHDMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSE 242
Query: 280 RQIKIWFQNRRMKWKKENKSKDGG-SDAGS 308
RQIKIWFQNRRMKWKK+NK K + AGS
Sbjct: 243 RQIKIWFQNRRMKWKKDNKLKSMSLATAGS 272
Score = 48 (22.0 bits), Expect = 2.3e-31, Sum P(2) = 2.3e-31
Identities = 19/67 (28%), Positives = 28/67 (41%)
Query: 1 MSSYFANSYMPDIKNGGVLPPEHHQQHHYGATVLPQNNGVEDPSMYDPRQVHHYGQV--- 57
MSSYF NS+ NG +Q +YG + + SM+ ++Y +
Sbjct: 1 MSSYFLNSFSGRYPNGS-----DYQLLNYGTNGAMNASYRDSTSMHSGSFGYNYNGIDLS 55
Query: 58 ---PNNG 61
PNNG
Sbjct: 56 VNRPNNG 62
>UNIPROTKB|G3MYX4 [details] [associations]
symbol:G3MYX4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0045446
"endothelial cell differentiation" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048704 GO:GO:0045446
GeneTree:ENSGT00700000104189 OMA:APQIFPW EMBL:DAAA02049063
Ensembl:ENSBTAT00000065146 Uniprot:G3MYX4
Length = 251
Score = 282 (104.3 bits), Expect = 2.7e-31, Sum P(3) = 2.7e-31
Identities = 59/88 (67%), Positives = 65/88 (73%)
Query: 220 TSASLP---SP-LYPWMRSQF--------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRR 267
TS + P +P ++PWMR + KR R YTRYQTLELEKE HFNRYLTRR
Sbjct: 164 TSTAAPEGQTPQIFPWMRKLHISHDMTGPDGKRARTAYTRYQTLELEKELHFNRYLTRRW 223
Query: 268 RIEIAHALCLTERQIKIWFQNRRMKWKK 295
RIEIAHALCL+ERQIKIWFQNRRMKWKK
Sbjct: 224 RIEIAHALCLSERQIKIWFQNRRMKWKK 251
Score = 46 (21.3 bits), Expect = 2.7e-31, Sum P(3) = 2.7e-31
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 1 MSSYFANSYMPDIKNGGVLPPEHHQQHHYGA 31
MSSYF NS+ NG P++ Q +YG+
Sbjct: 1 MSSYFVNSFSGRYPNG----PDY-QLLNYGS 26
Score = 41 (19.5 bits), Expect = 2.7e-31, Sum P(3) = 2.7e-31
Identities = 13/55 (23%), Positives = 21/55 (38%)
Query: 86 YGAHEGGMEQYPRPDSPSMGHMGP--QNGHQTPVVYASCKLQAAVGNGIIPGPES 138
YG + GM+ S S H G ++ P + + A + + PES
Sbjct: 45 YGYNYNGMDLSVNRSSASSSHFGAVGESSRAFPAPAQEPRFRQAASSCSLSSPES 99
>ZFIN|ZDB-GENE-980526-291 [details] [associations]
symbol:hoxb8b "homeo box B8b" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-980526-291
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231181 HOVERGEN:HBG016849
EMBL:AL645798 GeneTree:ENSGT00700000104332 EMBL:DQ060549
EMBL:AF071255 EMBL:Y14534 IPI:IPI00480876 RefSeq:NP_571256.1
UniGene:Dr.132197 ProteinModelPortal:Q8JH55 SMR:Q8JH55
Ensembl:ENSDART00000076154 GeneID:30420 KEGG:dre:30420 CTD:30420
eggNOG:NOG314669 InParanoid:Q8JH55 OrthoDB:EOG4H464V
NextBio:20806825 ArrayExpress:Q8JH55 Bgee:Q8JH55 Uniprot:Q8JH55
Length = 247
Score = 312 (114.9 bits), Expect = 3.0e-31, Sum P(2) = 3.0e-31
Identities = 61/81 (75%), Positives = 68/81 (83%)
Query: 228 LYPWMRSQFE-RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
L+PWMR Q R+RGRQTY+RYQTLELEKEF FN YLTR+RRIE++HAL LTERQ+KIWF
Sbjct: 134 LFPWMRPQATGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALALTERQVKIWF 193
Query: 287 QNRRMKWKKE-NKSKDGGSDA 306
QNRRMKWKKE NK K S A
Sbjct: 194 QNRRMKWKKEHNKDKFPSSKA 214
Score = 47 (21.6 bits), Expect = 3.0e-31, Sum P(2) = 3.0e-31
Identities = 11/29 (37%), Positives = 13/29 (44%)
Query: 1 MSSYFANSYMPDIKNGGVLPPEHHQQHHY 29
MSSYF NS K G L ++ Y
Sbjct: 1 MSSYFVNSLFTKFKGGDSLRSNYYDCPSY 29
>UNIPROTKB|P31273 [details] [associations]
symbol:HOXC8 "Homeobox protein Hox-C8" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IEA] [GO:0048705 "skeletal system morphogenesis"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0005634 "nucleus" evidence=NAS]
[GO:0007275 "multicellular organismal development" evidence=NAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=NAS] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0030182 GO:GO:0009952 EMBL:CH471054 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231181 GO:GO:0000122 GO:GO:0000976
GO:GO:0048705 HOVERGEN:HBG016849 eggNOG:NOG314669 OrthoDB:EOG4H464V
KO:K09308 OMA:HHGTSSI CTD:3224 EMBL:AY014300 EMBL:AY014299
EMBL:AK290959 EMBL:BC053898 EMBL:X99680 EMBL:X99681 IPI:IPI00010756
PIR:S15534 RefSeq:NP_073149.1 UniGene:Hs.664500
ProteinModelPortal:P31273 SMR:P31273 DIP:DIP-52312N IntAct:P31273
MINT:MINT-2802457 STRING:P31273 PhosphoSite:P31273 DMDM:13124745
PRIDE:P31273 DNASU:3224 Ensembl:ENST00000040584 GeneID:3224
KEGG:hsa:3224 UCSC:uc001ser.3 GeneCards:GC12P054402 HGNC:HGNC:5129
HPA:HPA028911 MIM:142970 neXtProt:NX_P31273 PharmGKB:PA29404
InParanoid:P31273 PhylomeDB:P31273 ChiTaRS:HOXC8 GenomeRNAi:3224
NextBio:12831 Bgee:P31273 CleanEx:HS_HOXC8 Genevestigator:P31273
GermOnline:ENSG00000037965 Uniprot:P31273
Length = 242
Score = 306 (112.8 bits), Expect = 3.0e-31, Sum P(2) = 3.0e-31
Identities = 59/80 (73%), Positives = 68/80 (85%)
Query: 223 SLPSPLYPWMRSQFE-RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQ 281
S PS ++PWMR R+ GRQTY+RYQTLELEKEF FN YLTR+RRIE++HAL LTERQ
Sbjct: 133 SSPSLMFPWMRPHAPGRRSGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQ 192
Query: 282 IKIWFQNRRMKWKKENKSKD 301
+KIWFQNRRMKWKKEN +KD
Sbjct: 193 VKIWFQNRRMKWKKEN-NKD 211
Score = 53 (23.7 bits), Expect = 3.0e-31, Sum P(2) = 3.0e-31
Identities = 32/130 (24%), Positives = 47/130 (36%)
Query: 1 MSSYFANSYMPDIKNGGVLPPEHHQ---QHHYGAT-VLPQNNGVEDPSM----YDPRQVH 52
MSSYF N K G L P ++ G + L G P + +
Sbjct: 1 MSSYFVNPLFSKYKAGESLEPAYYDCRFPQSVGRSHALVYGPGGSAPGFQHASHHVQDFF 60
Query: 53 HYGQ--VPNNG---QPV----HGMPYPRFPPYDRMDIRNAAYYGAHEGGMEQYPRPDSPS 103
H+G + N+G P HG +F Y+ + R + Y E + QYP S +
Sbjct: 61 HHGTSGISNSGYQQNPCSLSCHG-DASKFYGYEALP-RQSLYGAQQEASVVQYPDCKSSA 118
Query: 104 MGHMGPQNGH 113
+ GH
Sbjct: 119 NTNSSEGQGH 128
>UNIPROTKB|E2QRS0 [details] [associations]
symbol:HOXC8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00700000104054 EMBL:AAEX03014973 EMBL:AAEX03014974
Ensembl:ENSCAFT00000010684 Ensembl:ENSCAFT00000047496
NextBio:20892804 Uniprot:E2QRS0
Length = 242
Score = 306 (112.8 bits), Expect = 3.8e-31, Sum P(2) = 3.8e-31
Identities = 59/80 (73%), Positives = 68/80 (85%)
Query: 223 SLPSPLYPWMRSQFE-RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQ 281
S PS ++PWMR R+ GRQTY+RYQTLELEKEF FN YLTR+RRIE++HAL LTERQ
Sbjct: 133 SSPSLMFPWMRPHAPGRRSGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQ 192
Query: 282 IKIWFQNRRMKWKKENKSKD 301
+KIWFQNRRMKWKKEN +KD
Sbjct: 193 VKIWFQNRRMKWKKEN-NKD 211
Score = 52 (23.4 bits), Expect = 3.8e-31, Sum P(2) = 3.8e-31
Identities = 35/147 (23%), Positives = 47/147 (31%)
Query: 1 MSSYFANSYMPDIKNGGVLPPEHHQQHHYGATVLPQNNGVEDPSMYDPR-QVHHYGQVPN 59
MSSYF N K G L P ++ PQ G +Y P + +
Sbjct: 1 MSSYFVNPLFSKYKGGESLEPAYYDCR------FPQGVGRSPALVYGPGGSAPGFQHASH 54
Query: 60 NGQPV--HGMPYPRFPPYDRMDIRNAAYYGAHEGGMEQYPRPDSPSMGHMGPQNGHQTPV 117
+ Q HG P Y + N H + Y P G Q + V
Sbjct: 55 HVQDFFHHGASGISSPGYQQ----NPCSLSCHGDASKFYGYEALPRQSLYGAQQ-EASVV 109
Query: 118 VYASCKLQA----AVGNGIIPGPESPN 140
Y CK A + G G + SP+
Sbjct: 110 QYPDCKSSANTNSSEGQGHLNQNSSPS 136
>UNIPROTKB|P13378 [details] [associations]
symbol:HOXD8 "Homeobox protein Hox-D8" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0048705 "skeletal system
morphogenesis" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=NAS] [GO:0008595 "anterior/posterior axis specification,
embryo" evidence=NAS] [GO:0005634 "nucleus" evidence=NAS]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0008595
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
HOGENOM:HOG000231181 GO:GO:0000122 GO:GO:0048705 EMBL:AC009336
HOVERGEN:HBG016849 eggNOG:NOG314669 KO:K09308 CTD:3234
EMBL:AY014304 EMBL:AY014303 EMBL:AL520835 EMBL:BC038709
EMBL:BC090853 EMBL:X15507 IPI:IPI00008481 IPI:IPI00916034
IPI:IPI01018181 PIR:B32830 RefSeq:NP_001186675.1 RefSeq:NP_062458.1
UniGene:Hs.301963 ProteinModelPortal:P13378 SMR:P13378
MINT:MINT-7032137 STRING:P13378 PhosphoSite:P13378 DMDM:13124737
PRIDE:P13378 Ensembl:ENST00000313173 Ensembl:ENST00000429017
Ensembl:ENST00000450510 Ensembl:ENST00000544999 GeneID:3234
KEGG:hsa:3234 UCSC:uc002uko.3 GeneCards:GC02P176958 HGNC:HGNC:5139
MIM:142985 neXtProt:NX_P13378 PharmGKB:PA29413 InParanoid:P13378
OMA:GQEYFHP GenomeRNAi:3234 NextBio:12869 ArrayExpress:P13378
Bgee:P13378 CleanEx:HS_HOXD8 Genevestigator:P13378
GermOnline:ENSG00000175879 Uniprot:P13378
Length = 290
Score = 317 (116.6 bits), Expect = 6.1e-31, Sum P(2) = 6.1e-31
Identities = 60/82 (73%), Positives = 71/82 (86%)
Query: 222 ASLPSPLYPWMRSQFE--RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
+S PS ++PWMR Q R+RGRQTY+R+QTLELEKEF FN YLTR+RRIE++HAL LTE
Sbjct: 179 SSSPSQMFPWMRPQAAPGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALALTE 238
Query: 280 RQIKIWFQNRRMKWKKENKSKD 301
RQ+KIWFQNRRMKWKKEN +KD
Sbjct: 239 RQVKIWFQNRRMKWKKEN-NKD 259
Score = 39 (18.8 bits), Expect = 6.1e-31, Sum P(2) = 6.1e-31
Identities = 16/63 (25%), Positives = 23/63 (36%)
Query: 58 PNNGQPVHGMPYPRFPPYDRMDIRNAAYYGAHEGGMEQYPRPD--SPSMGHMG--PQNGH 113
P+ H P+P PP + G EG ++Y P SP+ + P H
Sbjct: 62 PHAPPQAHAHPHPSPPP-------SGTGCGGREGRGQEYFHPGGGSPAAAYQAAPPPPPH 114
Query: 114 QTP 116
P
Sbjct: 115 PPP 117
>UNIPROTKB|E1BQ67 [details] [associations]
symbol:HOXB5 "Homeobox protein Hox-B5" species:9031 "Gallus
gallus" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0045446 "endothelial cell
differentiation" evidence=IEA] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104189 EMBL:AADN02070205 EMBL:AADN02070206
IPI:IPI00821744 Ensembl:ENSGALT00000018008 ArrayExpress:E1BQ67
Uniprot:E1BQ67
Length = 258
Score = 303 (111.7 bits), Expect = 7.7e-31, Sum P(2) = 7.7e-31
Identities = 56/62 (90%), Positives = 58/62 (93%)
Query: 239 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+ERQIKIWFQNRRMKWKK+NK
Sbjct: 191 KRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNK 250
Query: 299 SK 300
K
Sbjct: 251 LK 252
Score = 52 (23.4 bits), Expect = 7.7e-31, Sum P(2) = 7.7e-31
Identities = 19/55 (34%), Positives = 26/55 (47%)
Query: 1 MSSYFANSYMPDIKNGGVLPPEHHQQHHYGATVLPQNNGVEDPS-MYDPRQVHHY 54
MSSYF NS+ NG P++ Q +YG T N D S M+ ++Y
Sbjct: 1 MSSYFVNSFSGRYPNG----PDY-QLLNYG-TSSSMNGSYRDSSTMHSSSYGYNY 49
>UNIPROTKB|P17277 [details] [associations]
symbol:HOXA4 "Homeobox protein Hox-A4" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 KO:K09304
HOGENOM:HOG000231179 HOVERGEN:HBG016849 EMBL:X52670 EMBL:X52747
IPI:IPI00593052 PIR:S09257 RefSeq:NP_001025517.1
RefSeq:XP_003640746.1 UniGene:Gga.4243 ProteinModelPortal:P17277
SMR:P17277 GeneID:100858374 GeneID:395307 KEGG:gga:100858374
KEGG:gga:395307 CTD:3201 eggNOG:NOG257177 InParanoid:P17277
OrthoDB:EOG4GTKF7 NextBio:20815392 Uniprot:P17277
Length = 309
Score = 283 (104.7 bits), Expect = 1.3e-30, Sum P(2) = 1.3e-30
Identities = 56/82 (68%), Positives = 62/82 (75%)
Query: 228 LYPWMR-----------SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALC 276
+YPWM+ S E KR R YTR Q LELEKEFHFNRYLTRRRRIEIAH LC
Sbjct: 188 VYPWMKKIHVSTVNPNYSGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLC 247
Query: 277 LTERQIKIWFQNRRMKWKKENK 298
L+ERQ+KIWFQNRRMKWKK++K
Sbjct: 248 LSERQVKIWFQNRRMKWKKDHK 269
Score = 70 (29.7 bits), Expect = 1.3e-30, Sum P(2) = 1.3e-30
Identities = 34/123 (27%), Positives = 42/123 (34%)
Query: 20 PPEHHQQHHYGATVLPQN--NGVEDPSMYDPRQVHHY-GQVPNNGQPVHGMPYPRFPPYD 76
PP H H G LP+ +P P G P P YP+ PY
Sbjct: 53 PPPHLHAAHPGPA-LPEYFPRPRREPGYQAPAAPPGPPGPPPEALYPAQAPSYPQ-APYS 110
Query: 77 RMDIRNAAYYGAHEGGMEQYPRPDSPSMGHMGPQN----GHQTPVVYASCKLQAAVGNGI 132
+AA G + P P P+ GH GP GH + C+ A G G
Sbjct: 111 YSSAGSAAP-GPEQPPPGASPPPPPPAKGHPGPAQPLLPGH---ALQRRCEAAPAAGAGT 166
Query: 133 IPG 135
PG
Sbjct: 167 GPG 169
>UNIPROTKB|H9KZ47 [details] [associations]
symbol:HOXB7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 EMBL:AADN02027109 EMBL:AADN02027110
Ensembl:ENSGALT00000004740 Uniprot:H9KZ47
Length = 147
Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 62/70 (88%), Positives = 66/70 (94%)
Query: 237 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
+RKRGRQTYTRYQTLELEKEFH+NRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE
Sbjct: 66 DRKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 125
Query: 297 NKSKDGGSDA 306
NK+ GS +
Sbjct: 126 NKTACSGSSS 135
>ZFIN|ZDB-GENE-990415-113 [details] [associations]
symbol:hoxc6a "homeo box C6a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-990415-113
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231181 GeneTree:ENSGT00700000104090
HOVERGEN:HBG016849 KO:K09306 EMBL:AF071265 EMBL:BC083307
EMBL:DQ060554 EMBL:X17266 EMBL:Y14546 IPI:IPI00494357 PIR:S08639
RefSeq:NP_571198.1 UniGene:Dr.132203 ProteinModelPortal:P15862
SMR:P15862 Ensembl:ENSDART00000103136 GeneID:30346 KEGG:dre:30346
CTD:30346 eggNOG:NOG266030 InParanoid:P15862 OMA:MNSYFAN
OrthoDB:EOG41NTMZ NextBio:20806776 ArrayExpress:P15862 Bgee:P15862
Uniprot:P15862
Length = 231
Score = 305 (112.4 bits), Expect = 3.3e-30, Sum P(2) = 3.3e-30
Identities = 59/78 (75%), Positives = 65/78 (83%)
Query: 228 LYPWMRSQ---------FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWM+ +R+RGRQ Y+RYQTLELEKEFHFNRYLTRRRRIEIA+ALCLT
Sbjct: 123 IYPWMQRMNSHSGVGYGSDRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLT 182
Query: 279 ERQIKIWFQNRRMKWKKE 296
ERQIKIWFQNRRMKWKKE
Sbjct: 183 ERQIKIWFQNRRMKWKKE 200
Score = 44 (20.5 bits), Expect = 3.3e-30, Sum P(2) = 3.3e-30
Identities = 22/60 (36%), Positives = 27/60 (45%)
Query: 1 MSSYFANSYMPDIKNGG--VLP--P----EHHQQHH---YGATVLPQNNGVEDPSMYDPR 49
M+SYFAN + +GG VLP P + H YG TV QN P Y P+
Sbjct: 1 MNSYFANPSLSCHLSGGQEVLPNMPLNSTTYDSVRHFSSYGTTVT-QNRIYASP-FYSPQ 58
>UNIPROTKB|A7MBD6 [details] [associations]
symbol:HOXD4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048863 "stem cell
differentiation" evidence=IEA] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0048863
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 GO:GO:0048704
eggNOG:NOG314883 KO:K09304 HOGENOM:HOG000231179 HOVERGEN:HBG016849
OrthoDB:EOG4GTKF7 CTD:3233 OMA:EQGADYY EMBL:DAAA02004173
EMBL:BC151499 IPI:IPI00694463 RefSeq:NP_001094557.1
UniGene:Bt.41501 SMR:A7MBD6 Ensembl:ENSBTAT00000028606
GeneID:513306 KEGG:bta:513306 InParanoid:A7MBD6 NextBio:20870804
Uniprot:A7MBD6
Length = 258
Score = 298 (110.0 bits), Expect = 6.8e-30, Sum P(2) = 6.8e-30
Identities = 62/113 (54%), Positives = 74/113 (65%)
Query: 220 TSASLPSPLYPWMRSQF-----------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRR 268
T+ P+ +YPWM+ E KR R YTR Q LELEKEFHFNRYLTRRRR
Sbjct: 128 TALKQPAVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRR 187
Query: 269 IEIAHALCLTERQIKIWFQNRRMKWKKENK-----SKDGGSDAGSDITPATSP 316
IEIAH LCL+ERQIKIWFQNRRMKWKK++K + S + S + +T+P
Sbjct: 188 IEIAHTLCLSERQIKIWFQNRRMKWKKDHKLPNTKGRSSSSSSSSSCSSSTAP 240
Score = 48 (22.0 bits), Expect = 6.8e-30, Sum P(2) = 6.8e-30
Identities = 15/42 (35%), Positives = 18/42 (42%)
Query: 73 PP--YDRMDIRNAAYYGAHEGGMEQYPRPDSPSMGHMGPQNG 112
PP Y R D + G G P P P+ GH GP+ G
Sbjct: 50 PPGLYPRPDFGEQTFGGGGPG-----PGPSLPTRGH-GPEPG 85
Score = 48 (22.0 bits), Expect = 6.8e-30, Sum P(2) = 6.8e-30
Identities = 34/112 (30%), Positives = 40/112 (35%)
Query: 1 MSSYFANSYMPDIK--------NGGVLPPEHHQQHHYGATVLPQNNGVEDPSMYDPRQVH 52
MSSY NS D K GG L + +YG Q + P +Y PR
Sbjct: 3 MSSYMVNSKYVDPKFPPCEEYLQGGYLGEQGAD--YYGGGGSAQGTDFQPPGLY-PRP-- 57
Query: 53 HYG-QVPNNGQPVHGMPYPRFPPYDRMDIRNAAYYGAHEGGM-EQYPRPDSP 102
+G Q G P G P P P R G H G E P P +P
Sbjct: 58 DFGEQTFGGGGP--G-PGPSLPT--RGHGPEPGGPGGHYGASGEPCPAPSAP 104
>RGD|1309690 [details] [associations]
symbol:Hoxd4 "homeo box D4" species:10116 "Rattus norvegicus"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA;ISO] [GO:0048863 "stem cell differentiation"
evidence=IEA;ISO] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 RGD:1309690 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0048863 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0048704 EMBL:CH473949 KO:K09304
OrthoDB:EOG4GTKF7 CTD:3233 OMA:EQGADYY IPI:IPI00389332
RefSeq:NP_001099355.1 UniGene:Rn.141410 Ensembl:ENSRNOT00000002145
GeneID:288153 KEGG:rno:288153 UCSC:RGD:1309690 NextBio:627686
Uniprot:D4ACE1
Length = 251
Score = 298 (110.0 bits), Expect = 6.8e-30, Sum P(2) = 6.8e-30
Identities = 62/111 (55%), Positives = 74/111 (66%)
Query: 220 TSASLPSPLYPWMRSQF-----------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRR 268
T+ P+ +YPWM+ E KR R YTR Q LELEKEFHFNRYLTRRRR
Sbjct: 123 TALKQPAVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRR 182
Query: 269 IEIAHALCLTERQIKIWFQNRRMKWKKENK---SKDGGSDAGSDITPATSP 316
IEIAH LCL+ERQIKIWFQNRRMKWKK++K +K S + S + + +P
Sbjct: 183 IEIAHTLCLSERQIKIWFQNRRMKWKKDHKLPNTKGRSSSSSSSCSSSAAP 233
Score = 48 (22.0 bits), Expect = 6.8e-30, Sum P(2) = 6.8e-30
Identities = 26/79 (32%), Positives = 32/79 (40%)
Query: 1 MSSYFANSYMPDIKNGGVLPP-EHHQQHHY----GATVL---PQNNGVEDPSMYDPRQVH 52
MSSY NS D K PP E + Q Y GA Q + + P +Y PR
Sbjct: 3 MSSYMVNSKYVDPK----FPPCEEYLQGGYLGEQGADYYGSGAQGSDFQPPGLY-PRP-- 55
Query: 53 HYGQVP-NNGQPVHGMPYP 70
+G+ P G P G P
Sbjct: 56 DFGEQPFGGGGPGPGSALP 74
>UNIPROTKB|F1NMG4 [details] [associations]
symbol:LOC100858374 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 IPI:IPI00593052 EMBL:AADN02000981
Ensembl:ENSGALT00000018006 OMA:PSDEENM Uniprot:F1NMG4
Length = 309
Score = 283 (104.7 bits), Expect = 6.8e-30, Sum P(2) = 6.8e-30
Identities = 56/82 (68%), Positives = 62/82 (75%)
Query: 228 LYPWMR-----------SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALC 276
+YPWM+ S E KR R YTR Q LELEKEFHFNRYLTRRRRIEIAH LC
Sbjct: 188 VYPWMKKIHVSTVNPNYSGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLC 247
Query: 277 LTERQIKIWFQNRRMKWKKENK 298
L+ERQ+KIWFQNRRMKWKK++K
Sbjct: 248 LSERQVKIWFQNRRMKWKKDHK 269
Score = 63 (27.2 bits), Expect = 6.8e-30, Sum P(2) = 6.8e-30
Identities = 26/93 (27%), Positives = 33/93 (35%)
Query: 20 PPEHHQQHHYGATVLPQN--NGVEDPSMYDPRQVHHY-GQVPNNGQPVHGMPYPRFPPYD 76
PP H H G LP+ +P P G P P YP+ PY
Sbjct: 53 PPPHLHAAHPGPA-LPEYFPRPRREPGYQAPAAPPGPPGPPPEALYPAQAPSYPQ-APYS 110
Query: 77 RMDIRNAAYYGAHEGGMEQYPRPDSPSMGHMGP 109
+AA G + +P P P+ GH GP
Sbjct: 111 YSSAGSAAP-GPEQPPPGAFPPPPPPAKGHPGP 142
>UNIPROTKB|J9P833 [details] [associations]
symbol:HOXC5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104161
OMA:CYSGLDL EMBL:AAEX03014973 ProteinModelPortal:J9P833
Ensembl:ENSCAFT00000049441 Uniprot:J9P833
Length = 222
Score = 305 (112.4 bits), Expect = 1.1e-29, Sum P(2) = 1.1e-29
Identities = 58/81 (71%), Positives = 65/81 (80%)
Query: 225 PSPLYPWMRS-----QFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
P +YPWM + + KR R +YTRYQTLELEKEFHFNRYLTRRRRIEIA+ LCL E
Sbjct: 137 PPQIYPWMTKLHMSHETDGKRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNE 196
Query: 280 RQIKIWFQNRRMKWKKENKSK 300
RQIKIWFQNRRMKWKK++K K
Sbjct: 197 RQIKIWFQNRRMKWKKDSKMK 217
Score = 39 (18.8 bits), Expect = 1.1e-29, Sum P(2) = 1.1e-29
Identities = 34/112 (30%), Positives = 47/112 (41%)
Query: 1 MSSYFANSYMPDIKNGGVLPPEHHQQ-HHYGATVLPQNN----GVEDPSMYDPRQVHHYG 55
MSSY ANS+ N +P + Q +YG+ Q + G D S+ P
Sbjct: 1 MSSYVANSFYKQSPN---IPAYNMQTCGNYGSAAEVQASRYCYGGLDLSITFPPPA---- 53
Query: 56 QVPNNGQPVHGMPY---PRFPPYDRMDIRNAAYYGAHEGGMEQYPRPDSPSM 104
P+N +HG+ PR P DR AA G H G ++ P +P M
Sbjct: 54 --PSNS--LHGVDMAASPRAHP-DRPACSAAAAPG-HALGRDE-AAPLNPGM 98
>UNIPROTKB|Q00444 [details] [associations]
symbol:HOXC5 "Homeobox protein Hox-C5" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0048706 "embryonic skeletal system
development" evidence=IEA] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=TAS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0030054 "cell junction" evidence=IDA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0030054 GO:GO:0043565 GO:GO:0003700
GO:GO:0006357 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048706 HOVERGEN:HBG016849
HOGENOM:HOG000231178 KO:K09305 UniGene:Hs.549040 EMBL:X61755
IPI:IPI00022893 PIR:S20029 RefSeq:NP_061826.1
ProteinModelPortal:Q00444 SMR:Q00444 STRING:Q00444
PhosphoSite:Q00444 DMDM:232262 PRIDE:Q00444 DNASU:3222
Ensembl:ENST00000312492 GeneID:3222 KEGG:hsa:3222 UCSC:uc001sew.3
CTD:3222 GeneCards:GC12P054379 HGNC:HGNC:5127 HPA:HPA026794
MIM:142973 neXtProt:NX_Q00444 PharmGKB:PA29402 eggNOG:NOG286013
InParanoid:Q00444 OMA:CYSGLDL OrthoDB:EOG4CRM16 PhylomeDB:Q00444
GenomeRNAi:3222 NextBio:12820 Bgee:Q00444 Genevestigator:Q00444
GermOnline:ENSG00000172789 Uniprot:Q00444
Length = 222
Score = 305 (112.4 bits), Expect = 1.1e-29, Sum P(2) = 1.1e-29
Identities = 58/81 (71%), Positives = 65/81 (80%)
Query: 225 PSPLYPWMRS-----QFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
P +YPWM + + KR R +YTRYQTLELEKEFHFNRYLTRRRRIEIA+ LCL E
Sbjct: 137 PPQIYPWMTKLHMSHETDGKRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNE 196
Query: 280 RQIKIWFQNRRMKWKKENKSK 300
RQIKIWFQNRRMKWKK++K K
Sbjct: 197 RQIKIWFQNRRMKWKKDSKMK 217
Score = 39 (18.8 bits), Expect = 1.1e-29, Sum P(2) = 1.1e-29
Identities = 34/112 (30%), Positives = 47/112 (41%)
Query: 1 MSSYFANSYMPDIKNGGVLPPEHHQQ-HHYGATVLPQNN----GVEDPSMYDPRQVHHYG 55
MSSY ANS+ N +P + Q +YG+ Q + G D S+ P
Sbjct: 1 MSSYVANSFYKQSPN---IPAYNMQTCGNYGSASEVQASRYCYGGLDLSITFPPPA---- 53
Query: 56 QVPNNGQPVHGMPY---PRFPPYDRMDIRNAAYYGAHEGGMEQYPRPDSPSM 104
P+N +HG+ PR P DR AA G H G ++ P +P M
Sbjct: 54 --PSNS--LHGVDMAANPRAHP-DRPACSAAAAPG-HAPGRDE-AAPLNPGM 98
>UNIPROTKB|G3MXN5 [details] [associations]
symbol:HOXA4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
GO:GO:0048704 KO:K09304 CTD:3201 OMA:PPGKPQT EMBL:DAAA02010938
UniGene:Bt.59423 NextBio:20877630 RefSeq:NP_001069602.2
Ensembl:ENSBTAT00000065144 GeneID:538865 KEGG:bta:538865
Uniprot:G3MXN5
Length = 319
Score = 288 (106.4 bits), Expect = 1.1e-29, Sum P(2) = 1.1e-29
Identities = 58/85 (68%), Positives = 65/85 (76%)
Query: 237 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
E KR R YTR Q LELEKEFHFNRYLTRRRRIEIAH LCL+ERQ+KIWFQNRRMKWKK+
Sbjct: 213 EPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKD 272
Query: 297 NK---SKDGGSDAGS-DITPATSPQ 317
+K +K S++GS P PQ
Sbjct: 273 HKLPNTKMRSSNSGSASAGPPGKPQ 297
Score = 56 (24.8 bits), Expect = 1.1e-29, Sum P(2) = 1.1e-29
Identities = 12/41 (29%), Positives = 20/41 (48%)
Query: 70 PRFPPYDRMDIRNAAYYG-AHEGGMEQYPRPDSPSMGHMGP 109
P+FPP++ + G GG Y +P +P+ H+ P
Sbjct: 15 PKFPPFEEYAQHSGPGGGDGGPGGGPGYQQPPAPAAQHLPP 55
Score = 37 (18.1 bits), Expect = 1.1e-27, Sum P(2) = 1.1e-27
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 94 EQYPRPDSPSMGHMGPQNG--HQTP 116
E+Y + P G GP G +Q P
Sbjct: 21 EEYAQHSGPGGGDGGPGGGPGYQQP 45
>UNIPROTKB|F1MJX6 [details] [associations]
symbol:HOXA4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
EMBL:DAAA02010938 IPI:IPI00692351 UniGene:Bt.59423
Ensembl:ENSBTAT00000001409 NextBio:20877630 Uniprot:F1MJX6
Length = 253
Score = 288 (106.4 bits), Expect = 1.1e-29, Sum P(2) = 1.1e-29
Identities = 58/85 (68%), Positives = 65/85 (76%)
Query: 237 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
E KR R YTR Q LELEKEFHFNRYLTRRRRIEIAH LCL+ERQ+KIWFQNRRMKWKK+
Sbjct: 147 EPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKD 206
Query: 297 NK---SKDGGSDAGS-DITPATSPQ 317
+K +K S++GS P PQ
Sbjct: 207 HKLPNTKMRSSNSGSASAGPPGKPQ 231
Score = 56 (24.8 bits), Expect = 1.1e-29, Sum P(2) = 1.1e-29
Identities = 19/59 (32%), Positives = 29/59 (49%)
Query: 70 PRFPPYDRMDIRNA------AY-YGAHEGGME--QYPRPDSPSMGHMGPQNG-HQTPVV 118
P+FPP++ + A AY YG + GG Q P+P+ P P +G H + V+
Sbjct: 15 PKFPPFEEYALYPAHGAADTAYPYG-YRGGASPGQPPQPEQPPAHAKAPAHGLHASHVL 72
>MGI|MGI:96208 [details] [associations]
symbol:Hoxd4 "homeobox D4" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IGI;IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IGI;IMP] [GO:0048863 "stem cell differentiation"
evidence=IDA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 MGI:MGI:96208 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0048863 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 GO:GO:0048704
eggNOG:NOG314883 KO:K09304 HOGENOM:HOG000231179 HOVERGEN:HBG016849
OrthoDB:EOG4GTKF7 EMBL:AL928644 UniGene:Mm.430708
GermOnline:ENSMUSG00000042464 CTD:3233 OMA:EQGADYY EMBL:J03770
EMBL:U77364 EMBL:AK135479 EMBL:M87804 IPI:IPI00308730 PIR:A36170
PIR:E42694 RefSeq:NP_034599.2 UniGene:Mm.482194
ProteinModelPortal:P10628 SMR:P10628 STRING:P10628
PhosphoSite:P10628 PRIDE:P10628 Ensembl:ENSMUST00000047904
Ensembl:ENSMUST00000111980 GeneID:15436 KEGG:mmu:15436
UCSC:uc008kef.1 InParanoid:A2ASN3 NextBio:288210 Bgee:P10628
Genevestigator:P10628 Uniprot:P10628
Length = 250
Score = 300 (110.7 bits), Expect = 1.4e-29, Sum P(2) = 1.4e-29
Identities = 62/110 (56%), Positives = 74/110 (67%)
Query: 220 TSASLPSPLYPWMRSQF-----------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRR 268
T+ P+ +YPWM+ E KR R YTR Q LELEKEFHFNRYLTRRRR
Sbjct: 123 TALKQPAVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRR 182
Query: 269 IEIAHALCLTERQIKIWFQNRRMKWKKENK--SKDGGSDAGSDITPATSP 316
IEIAH LCL+ERQIKIWFQNRRMKWKK++K + G S + S + + +P
Sbjct: 183 IEIAHTLCLSERQIKIWFQNRRMKWKKDHKLPNTKGRSSSSSSCSSSAAP 232
Score = 43 (20.2 bits), Expect = 1.4e-29, Sum P(2) = 1.4e-29
Identities = 33/107 (30%), Positives = 42/107 (39%)
Query: 1 MSSYFANSYMPDIKNGGVLPP-EHHQQHHY----GATVLPQN-NGVE-DPSMYDPRQVHH 53
MSSY NS D K PP E + Q Y GA G + PS PR
Sbjct: 3 MSSYMVNSKYVDPK----FPPCEEYLQGGYLGEQGADYYGSGAQGADFQPSGLYPRP--D 56
Query: 54 YGQVP-NNGQPVHGMPYPRFPPYDRMDIRNAAYYGAHEGGMEQYPRP 99
+G+ P G P G P + + ++YGA G E+ P P
Sbjct: 57 FGEQPFGGGGPGPGSALPA-RGHGQEPSGPGSHYGA-PG--ERCPAP 99
>UNIPROTKB|F1SHT2 [details] [associations]
symbol:HOXA4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
GO:GO:0048704 KO:K09304 OMA:PPGKPQT EMBL:CU570959
RefSeq:XP_003134889.1 UniGene:Ssc.38326 Ensembl:ENSSSCT00000018185
GeneID:100519635 KEGG:ssc:100519635 Uniprot:F1SHT2
Length = 329
Score = 282 (104.3 bits), Expect = 1.4e-29, Sum P(2) = 1.4e-29
Identities = 55/85 (64%), Positives = 62/85 (72%)
Query: 237 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
E KR R YTR Q LELEKEFHFNRYLTRRRRIEIAH LCL+ERQ+KIWFQNRRMKWKK+
Sbjct: 221 EPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKD 280
Query: 297 NKSKD----GGSDAGSDITPATSPQ 317
+K + + A + P PQ
Sbjct: 281 HKLPNTKMRSSNSASASAGPPGKPQ 305
Score = 61 (26.5 bits), Expect = 1.4e-29, Sum P(2) = 1.4e-29
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 70 PRFPPYDRMDIRNAAYYG-AHEGGMEQYPRPDSPSMGHMGPQ 110
P+FPP++ + G GG Y +P +P+ H+ PQ
Sbjct: 15 PKFPPFEEYAQHSGPGGGDGGPGGGPGYQQPPAPAAQHLPPQ 56
Score = 52 (23.4 bits), Expect = 1.2e-28, Sum P(2) = 1.2e-28
Identities = 18/54 (33%), Positives = 25/54 (46%)
Query: 69 YPRFPPYDRMDIRNAAY-YGAHEGGME--QYPRPDSPSMGHMGPQNG-HQTPVV 118
YP Y +AAY YG + GG + P+ + P GP +G H T V+
Sbjct: 84 YPAAALYPAHGAADAAYPYG-YRGGASPGRPPQSEQPPAHAKGPAHGLHATHVL 136
Score = 37 (18.1 bits), Expect = 4.5e-27, Sum P(2) = 4.5e-27
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 94 EQYPRPDSPSMGHMGPQNG--HQTP 116
E+Y + P G GP G +Q P
Sbjct: 21 EEYAQHSGPGGGDGGPGGGPGYQQP 45
>UNIPROTKB|I3LRP3 [details] [associations]
symbol:LOC100627840 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048706
"embryonic skeletal system development" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104161 KO:K09305 OMA:CYSGLDL EMBL:CU633419
EMBL:FP579005 RefSeq:XP_003126250.1 RefSeq:XP_003355471.1
SMR:I3LRP3 Ensembl:ENSSSCT00000028782 Ensembl:ENSSSCT00000031368
GeneID:100152707 GeneID:100627840 KEGG:ssc:100152707
KEGG:ssc:100627840 Uniprot:I3LRP3
Length = 222
Score = 305 (112.4 bits), Expect = 1.8e-29, Sum P(2) = 1.8e-29
Identities = 58/81 (71%), Positives = 65/81 (80%)
Query: 225 PSPLYPWMRS-----QFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
P +YPWM + + KR R +YTRYQTLELEKEFHFNRYLTRRRRIEIA+ LCL E
Sbjct: 137 PPQIYPWMTKLHMSHETDGKRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNE 196
Query: 280 RQIKIWFQNRRMKWKKENKSK 300
RQIKIWFQNRRMKWKK++K K
Sbjct: 197 RQIKIWFQNRRMKWKKDSKMK 217
Score = 37 (18.1 bits), Expect = 1.8e-29, Sum P(2) = 1.8e-29
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 1 MSSYFANSYMPDIKN 15
MSSY ANS+ N
Sbjct: 1 MSSYVANSFYKQSPN 15
>MGI|MGI:96196 [details] [associations]
symbol:Hoxc5 "homeobox C5" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IGI] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048706 "embryonic skeletal system development"
evidence=IGI] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 MGI:MGI:96196 GO:GO:0005634
GO:GO:0009952 GO:GO:0030054 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0048706 GeneTree:ENSGT00700000104161
HOVERGEN:HBG016849 HOGENOM:HOG000231178 KO:K09305 CTD:3222
eggNOG:NOG286013 OMA:CYSGLDL OrthoDB:EOG4CRM16 EMBL:U28071
EMBL:AK078527 EMBL:BC115551 EMBL:BC115552 IPI:IPI00134225
PIR:A60084 RefSeq:NP_783857.1 UniGene:Mm.103825
ProteinModelPortal:P32043 SMR:P32043 STRING:P32043
PhosphoSite:P32043 PRIDE:P32043 Ensembl:ENSMUST00000001709
GeneID:15424 KEGG:mmu:15424 UCSC:uc007xxe.1 InParanoid:P32043
NextBio:288170 Bgee:P32043 CleanEx:MM_HOXC5 Genevestigator:P32043
GermOnline:ENSMUSG00000022485 Uniprot:P32043
Length = 222
Score = 305 (112.4 bits), Expect = 1.8e-29, Sum P(2) = 1.8e-29
Identities = 58/81 (71%), Positives = 65/81 (80%)
Query: 225 PSPLYPWMRS-----QFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
P +YPWM + + KR R +YTRYQTLELEKEFHFNRYLTRRRRIEIA+ LCL E
Sbjct: 137 PPQIYPWMTKLHMSHETDGKRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNE 196
Query: 280 RQIKIWFQNRRMKWKKENKSK 300
RQIKIWFQNRRMKWKK++K K
Sbjct: 197 RQIKIWFQNRRMKWKKDSKMK 217
Score = 37 (18.1 bits), Expect = 1.8e-29, Sum P(2) = 1.8e-29
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 1 MSSYFANSYMPDIKN 15
MSSY ANS+ N
Sbjct: 1 MSSYVANSFYKQSPN 15
>RGD|1307584 [details] [associations]
symbol:Hoxc5 "homeo box C5" species:10116 "Rattus norvegicus"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA;ISO] [GO:0030054 "cell junction" evidence=IEA;ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0048706 "embryonic skeletal system development"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
RGD:1307584 GO:GO:0005634 GO:GO:0009952 GO:GO:0030054 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0048706 EMBL:CH474035
GeneTree:ENSGT00700000104161 KO:K09305 CTD:3222 OMA:CYSGLDL
OrthoDB:EOG4CRM16 EMBL:AC116663 IPI:IPI00210372
RefSeq:NP_001101586.1 UniGene:Rn.152771 SMR:D3ZP88
Ensembl:ENSRNOT00000022247 GeneID:315341 KEGG:rno:315341
NextBio:669109 Uniprot:D3ZP88
Length = 222
Score = 305 (112.4 bits), Expect = 1.8e-29, Sum P(2) = 1.8e-29
Identities = 58/81 (71%), Positives = 65/81 (80%)
Query: 225 PSPLYPWMRS-----QFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
P +YPWM + + KR R +YTRYQTLELEKEFHFNRYLTRRRRIEIA+ LCL E
Sbjct: 137 PPQIYPWMTKLHMSHETDGKRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNE 196
Query: 280 RQIKIWFQNRRMKWKKENKSK 300
RQIKIWFQNRRMKWKK++K K
Sbjct: 197 RQIKIWFQNRRMKWKKDSKMK 217
Score = 37 (18.1 bits), Expect = 1.8e-29, Sum P(2) = 1.8e-29
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 1 MSSYFANSYMPDIKN 15
MSSY ANS+ N
Sbjct: 1 MSSYVANSFYKQSPN 15
>UNIPROTKB|P09016 [details] [associations]
symbol:HOXD4 "Homeobox protein Hox-D4" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA] [GO:0048863 "stem cell differentiation" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=NAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0005634 "nucleus" evidence=NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=NAS] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0048863 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0048704 eggNOG:NOG314883 KO:K09304
HOGENOM:HOG000231179 HOVERGEN:HBG016849 OrthoDB:EOG4GTKF7
EMBL:X17360 EMBL:X04706 EMBL:AK313885 EMBL:BC016763 EMBL:BC074797
IPI:IPI00012390 PIR:S10985 RefSeq:NP_055436.2 UniGene:Hs.591609
ProteinModelPortal:P09016 SMR:P09016 STRING:P09016
PhosphoSite:P09016 DMDM:20141491 PRIDE:P09016
Ensembl:ENST00000306324 GeneID:3233 KEGG:hsa:3233 UCSC:uc002uks.3
CTD:3233 GeneCards:GC02P177022 HGNC:HGNC:5138 MIM:142981
neXtProt:NX_P09016 PharmGKB:PA29412 InParanoid:P09016 OMA:EQGADYY
PhylomeDB:P09016 GenomeRNAi:3233 NextBio:12865 Bgee:P09016
CleanEx:HS_HOXD4 Genevestigator:P09016 GermOnline:ENSG00000170166
Uniprot:P09016
Length = 255
Score = 295 (108.9 bits), Expect = 3.7e-29, Sum P(2) = 3.7e-29
Identities = 62/109 (56%), Positives = 73/109 (66%)
Query: 220 TSASLPSPLYPWMRSQF-----------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRR 268
T+ P+ +YPWM+ E KR R YTR Q LELEKEFHFNRYLTRRRR
Sbjct: 125 TALKQPAVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRR 184
Query: 269 IEIAHALCLTERQIKIWFQNRRMKWKKENK--SKDGGSDAGSDITPATS 315
IEIAH LCL+ERQIKIWFQNRRMKWKK++K + G S + S + +S
Sbjct: 185 IEIAHTLCLSERQIKIWFQNRRMKWKKDHKLPNTKGRSSSSSSSSSCSS 233
Score = 44 (20.5 bits), Expect = 3.7e-29, Sum P(2) = 3.7e-29
Identities = 26/79 (32%), Positives = 31/79 (39%)
Query: 1 MSSYFANSYMPDIKNGGVLPP-EHHQQHHY----GATVL---PQNNGVEDPSMYDPRQVH 52
MSSY NS D K PP E + Q Y GA Q + P +Y PR
Sbjct: 3 MSSYMVNSKYVDPK----FPPCEEYLQGGYLGEQGADYYGGGAQGADFQPPGLY-PRP-- 55
Query: 53 HYGQVPNNGQ-PVHGMPYP 70
+G+ P G P G P
Sbjct: 56 DFGEQPFGGSGPGPGSALP 74
>UNIPROTKB|F1NZJ3 [details] [associations]
symbol:HOXD4 "Homeobox protein Hox-D4" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA] [GO:0048863 "stem cell differentiation" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0048863
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 KO:K09304
UniGene:Gga.54375 CTD:3233 EMBL:AADN02020023 IPI:IPI01017209
RefSeq:NP_001012293.1 RefSeq:XP_421990.1 Ensembl:ENSGALT00000038691
GeneID:424139 KEGG:gga:424139 OMA:SRACSQQ NextBio:20826511
Uniprot:F1NZJ3
Length = 237
Score = 292 (107.8 bits), Expect = 3.7e-29, Sum P(2) = 3.7e-29
Identities = 63/107 (58%), Positives = 73/107 (68%)
Query: 225 PSPLYPWMR-----------SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAH 273
P+ +YPWM+ S E KR R YTR Q LELEKEFHFNRYLTRRRRIEIAH
Sbjct: 122 PAVVYPWMKKVHVNSVNPNYSGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAH 181
Query: 274 ALCLTERQIKIWFQNRRMKWKKENK---SKDGGSDAGSDITPATSPQ 317
LCL+ERQIKIWFQNRRMKWKK++K +K S + S+ T P+
Sbjct: 182 TLCLSERQIKIWFQNRRMKWKKDHKLPNTKGRSSSSASNPHLQTVPK 228
Score = 47 (21.6 bits), Expect = 3.7e-29, Sum P(2) = 3.7e-29
Identities = 18/59 (30%), Positives = 24/59 (40%)
Query: 70 PRFPPYDR------MDIRNAAYYGAHEGGMEQ----YPRPD--SPSMGHMGPQNGHQTP 116
P+FPP + + + A YYGA +G Q YPR + G G Q P
Sbjct: 15 PKFPPCEEYLQSSYLGEQGAEYYGASQGSDFQHQGLYPRSNYSEQPFGCAGAQGSAVQP 73
Score = 38 (18.4 bits), Expect = 3.2e-28, Sum P(2) = 3.2e-28
Identities = 13/30 (43%), Positives = 14/30 (46%)
Query: 1 MSSYFANSYMPDIKNGGVLPP-EHHQQHHY 29
MSSY NS D K PP E + Q Y
Sbjct: 3 MSSYMVNSKYVDPK----FPPCEEYLQSSY 28
>UNIPROTKB|F1NMG1 [details] [associations]
symbol:F1NMG1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 IPI:IPI00598309 OMA:PEQQYKS
GeneTree:ENSGT00700000104332 EMBL:AADN02000982 EMBL:AADN02000983
EMBL:AADN02071374 Ensembl:ENSGALT00000018011 Uniprot:F1NMG1
Length = 228
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 67/103 (65%), Positives = 72/103 (69%)
Query: 220 TSASLPSPLYPWMRSQF---------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIE 270
T SP+YPWM+ E KR R YTRYQTLELEKEFHFNRYLTRRRRIE
Sbjct: 126 TDRKYTSPVYPWMQRMNSCADNIGGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIE 185
Query: 271 IAHALCLTERQIKIWFQNRRMKWKKENKSKDGG-SDAGSDITP 312
IAHALCL+ERQIKIWFQNRRMKWKK+NK K + AG P
Sbjct: 186 IAHALCLSERQIKIWFQNRRMKWKKDNKLKSMSMAAAGGAFRP 228
>UNIPROTKB|P17278 [details] [associations]
symbol:HOXD4 "Homeobox protein Hox-D4" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 eggNOG:NOG314883 HOGENOM:HOG000231179
HOVERGEN:HBG016849 OrthoDB:EOG4GTKF7 EMBL:X52671 EMBL:X52672
IPI:IPI00600943 PIR:S09256 UniGene:Gga.54375
ProteinModelPortal:P17278 SMR:P17278 STRING:P17278
InParanoid:P17278 Uniprot:P17278
Length = 235
Score = 292 (107.8 bits), Expect = 4.7e-29, Sum P(2) = 4.7e-29
Identities = 63/107 (58%), Positives = 73/107 (68%)
Query: 225 PSPLYPWMR-----------SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAH 273
P+ +YPWM+ S E KR R YTR Q LELEKEFHFNRYLTRRRRIEIAH
Sbjct: 120 PAVVYPWMKKVHVNSVNPNYSGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAH 179
Query: 274 ALCLTERQIKIWFQNRRMKWKKENK---SKDGGSDAGSDITPATSPQ 317
LCL+ERQIKIWFQNRRMKWKK++K +K S + S+ T P+
Sbjct: 180 TLCLSERQIKIWFQNRRMKWKKDHKLPNTKGRSSSSASNPHLQTVPK 226
Score = 46 (21.3 bits), Expect = 4.7e-29, Sum P(2) = 4.7e-29
Identities = 14/39 (35%), Positives = 19/39 (48%)
Query: 70 PRFPPYDR------MDIRNAAYYGAHEGGMEQ----YPR 98
P+FPP + + + A YYGA +G Q YPR
Sbjct: 14 PKFPPCEEYLQSSYLGEQGAEYYGASQGSDFQHQGLYPR 52
Score = 42 (19.8 bits), Expect = 1.2e-28, Sum P(2) = 1.2e-28
Identities = 14/30 (46%), Positives = 16/30 (53%)
Query: 1 MSSYFANSYMPDIKNGGVLPP-EHHQQHHY 29
MSSY NSY+ D K PP E + Q Y
Sbjct: 3 MSSYMVNSYV-DPK----FPPCEEYLQSSY 27
>UNIPROTKB|E1BHR6 [details] [associations]
symbol:HOXC5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048706 "embryonic
skeletal system development" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0030054 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0048706 GeneTree:ENSGT00700000104161 KO:K09305 CTD:3222
OMA:CYSGLDL EMBL:DAAA02012839 IPI:IPI00694608 RefSeq:NP_001178280.1
UniGene:Bt.93629 Ensembl:ENSBTAT00000012696 GeneID:100140629
KEGG:bta:100140629 NextBio:20790992 Uniprot:E1BHR6
Length = 222
Score = 300 (110.7 bits), Expect = 5.9e-29, Sum P(2) = 5.9e-29
Identities = 57/78 (73%), Positives = 64/78 (82%)
Query: 228 LYPWMRS-----QFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQI 282
+YPWM + + KR R +YTRYQTLELEKEFHFNRYLTRRRRIEIA+ LCL ERQI
Sbjct: 140 IYPWMTKLHMSHETDGKRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQI 199
Query: 283 KIWFQNRRMKWKKENKSK 300
KIWFQNRRMKWKK++K K
Sbjct: 200 KIWFQNRRMKWKKDSKMK 217
Score = 37 (18.1 bits), Expect = 5.9e-29, Sum P(2) = 5.9e-29
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 1 MSSYFANSYMPDIKN 15
MSSY ANS+ N
Sbjct: 1 MSSYVANSFYKQSPN 15
>ZFIN|ZDB-GENE-980526-214 [details] [associations]
symbol:hoxd4a "homeo box D4a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-980526-214 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 KO:K09304
HOGENOM:HOG000231179 HOVERGEN:HBG016849 EMBL:BX322661 EMBL:BC162966
EMBL:BC162983 EMBL:BC163059 IPI:IPI00492173 RefSeq:NP_001119917.1
UniGene:Dr.75800 SMR:B0S5Y5 STRING:B0S5Y5
Ensembl:ENSDART00000082355 GeneID:30329 KEGG:dre:30329 CTD:30329
NextBio:20806762 Uniprot:B0S5Y5
Length = 256
Score = 288 (106.4 bits), Expect = 5.9e-29, Sum P(2) = 5.9e-29
Identities = 57/85 (67%), Positives = 63/85 (74%)
Query: 225 PSPLYPWMRSQF-----------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAH 273
P+ +YPWM+ E KR R YTR Q LELEKEFHFNRYLTRRRRIEIAH
Sbjct: 142 PAVVYPWMKKVHVTTVNPDYTGPEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAH 201
Query: 274 ALCLTERQIKIWFQNRRMKWKKENK 298
LCL+ERQIKIWFQNRRMKWKK++K
Sbjct: 202 TLCLSERQIKIWFQNRRMKWKKDHK 226
Score = 49 (22.3 bits), Expect = 5.9e-29, Sum P(2) = 5.9e-29
Identities = 18/51 (35%), Positives = 23/51 (45%)
Query: 1 MSSYFANSYMPDIKNGGVLPP-EHHQQHHYGATVLPQNNGVEDPSMYDPRQ 50
MSSY NS D K PP E + Q+ Y +P+ + P Y P Q
Sbjct: 23 MSSYMVNSKYVDPK----FPPCEEYSQNSY----IPE----QSPGYYSPSQ 61
Score = 46 (21.3 bits), Expect = 1.2e-28, Sum P(2) = 1.2e-28
Identities = 24/93 (25%), Positives = 32/93 (34%)
Query: 4 YFANSYMPDIKNGGVLPPEHHQQHHYGATVLPQNNGVEDPSMYDPRQVHHYGQVPNNG-Q 62
Y NSY+P+ G P + H G + ++N E P Y V P Q
Sbjct: 43 YSQNSYIPEQSPGYYSPSQDTDFQHPG--IYSRSNYSEQP--YSCSTVQGSSVQPRGHVQ 98
Query: 63 PVHGMPYPRFPPYDRMDIRNAAYYGAHEGGMEQ 95
P P FP G+ GG +Q
Sbjct: 99 DQASTPSP-FPAQTEQ-CPAVQISGSRTGGQQQ 129
>UNIPROTKB|F1PZZ7 [details] [associations]
symbol:HOXA4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
KO:K09304 CTD:3201 OMA:PPGKPQT EMBL:AAEX03009390 RefSeq:XP_539486.3
Ensembl:ENSCAFT00000004722 GeneID:482369 KEGG:cfa:482369
NextBio:20856981 Uniprot:F1PZZ7
Length = 317
Score = 280 (103.6 bits), Expect = 5.9e-29, Sum P(2) = 5.9e-29
Identities = 51/62 (82%), Positives = 55/62 (88%)
Query: 237 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
E KR R YTR Q LELEKEFHFNRYLTRRRRIEIAH LCL+ERQ+KIWFQNRRMKWKK+
Sbjct: 211 EPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKD 270
Query: 297 NK 298
+K
Sbjct: 271 HK 272
Score = 57 (25.1 bits), Expect = 5.9e-29, Sum P(2) = 5.9e-29
Identities = 14/48 (29%), Positives = 22/48 (45%)
Query: 70 PRFPPYDRMDIRNAAYYG-AHEGGMEQYPRPDSPSMGHMGPQNGHQTP 116
P+FPP++ + G GG Y +P +P+ H+ P Q P
Sbjct: 15 PKFPPFEEYAQHSGPGGGDGGPGGGPSYQQPPAPAAQHL-PAQQPQLP 61
Score = 55 (24.4 bits), Expect = 9.6e-29, Sum P(2) = 9.6e-29
Identities = 16/47 (34%), Positives = 22/47 (46%)
Query: 69 YPRFPPYDRMDIRNAAY-YGAHEGGME--QYPRPDSPSMGHMGPQNG 112
YP Y +AAY YG + GG + P+P+ P GP +G
Sbjct: 84 YPAAALYPAPAAADAAYPYG-YRGGASPGRQPQPEQPPARAKGPAHG 129
>UNIPROTKB|Q8T940 [details] [associations]
symbol:Ubx "Homeotic protein ultrabithorax" species:39708
"Junonia coenia" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
EMBL:AY074760 ProteinModelPortal:Q8T940 SMR:Q8T940 Uniprot:Q8T940
Length = 253
Score = 297 (109.6 bits), Expect = 7.6e-29, Sum P(2) = 7.6e-29
Identities = 58/71 (81%), Positives = 61/71 (85%)
Query: 229 YPWMR---SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIW 285
YPWM + R+RGRQTYTRYQTLELEKEFH N YLTRRRRIE+AHALCLTERQIKIW
Sbjct: 147 YPWMAIAGANGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIW 206
Query: 286 FQNRRMKWKKE 296
FQNRRMK KKE
Sbjct: 207 FQNRRMKLKKE 217
Score = 39 (18.8 bits), Expect = 7.6e-29, Sum P(2) = 7.6e-29
Identities = 19/54 (35%), Positives = 23/54 (42%)
Query: 85 YYGAHE-----GGMEQYPR-P-----DSPSMGHMG-PQNGHQTPVVYASCKLQA 126
+YGAH GG +QY P P H PQ+ V A+CKL A
Sbjct: 10 FYGAHGVHQGGGGGDQYRGFPLGLTYAQPHALHQPRPQDSPYDASVAAACKLYA 63
>RGD|1587253 [details] [associations]
symbol:Hoxa7 "homeobox A7" species:10116 "Rattus norvegicus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0001525 "angiogenesis"
evidence=ISO] [GO:0001953 "negative regulation of cell-matrix
adhesion" evidence=ISO] [GO:0002686 "negative regulation of
leukocyte migration" evidence=ISO] [GO:0003677 "DNA binding"
evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0005634
"nucleus" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=ISO] [GO:0009952 "anterior/posterior pattern
specification" evidence=ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA;ISO] [GO:0045617 "negative regulation of
keratinocyte differentiation" evidence=ISO] [GO:0045656 "negative
regulation of monocyte differentiation" evidence=ISO] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=ISO] [GO:0048863 "stem cell
differentiation" evidence=ISO] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1587253
GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0045944
GO:GO:0048863 GO:GO:0002686 GO:GO:0003700 GO:GO:0006351
GO:GO:0001525 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231181 GO:GO:0000122 GO:GO:0001953
GO:GO:0048704 eggNOG:NOG238660 HOVERGEN:HBG006088 OrthoDB:EOG4W9J4Z
GO:GO:0045617 GO:GO:0045656 EMBL:M16807 IPI:IPI01016307 PIR:A27471
UniGene:Rn.203714 ProteinModelPortal:P09634 SMR:P09634
UCSC:RGD:1587253 InParanoid:P09634 ArrayExpress:P09634
Genevestigator:P09634 GermOnline:ENSRNOG00000006544 Uniprot:P09634
Length = 105
Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 61/78 (78%), Positives = 65/78 (83%)
Query: 239 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
KRGRQTYTRYQTLELEKEFHFNRYLTRRR +EIAHALCLTERQIKIWFQNRRMKWKKE+K
Sbjct: 6 KRGRQTYTRYQTLELEKEFHFNRYLTRRRAVEIAHALCLTERQIKIWFQNRRMKWKKEHK 65
Query: 299 SKDGGSDA-GSDITPATS 315
+ A D P+ S
Sbjct: 66 DESQAPTAVPEDAVPSVS 83
>UNIPROTKB|P09634 [details] [associations]
symbol:Hoxa7 "Homeobox protein Hox-A7" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1587253
GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0045944
GO:GO:0048863 GO:GO:0002686 GO:GO:0003700 GO:GO:0006351
GO:GO:0001525 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231181 GO:GO:0000122 GO:GO:0001953
GO:GO:0048704 eggNOG:NOG238660 HOVERGEN:HBG006088 OrthoDB:EOG4W9J4Z
GO:GO:0045617 GO:GO:0045656 EMBL:M16807 IPI:IPI01016307 PIR:A27471
UniGene:Rn.203714 ProteinModelPortal:P09634 SMR:P09634
UCSC:RGD:1587253 InParanoid:P09634 ArrayExpress:P09634
Genevestigator:P09634 GermOnline:ENSRNOG00000006544 Uniprot:P09634
Length = 105
Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 61/78 (78%), Positives = 65/78 (83%)
Query: 239 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
KRGRQTYTRYQTLELEKEFHFNRYLTRRR +EIAHALCLTERQIKIWFQNRRMKWKKE+K
Sbjct: 6 KRGRQTYTRYQTLELEKEFHFNRYLTRRRAVEIAHALCLTERQIKIWFQNRRMKWKKEHK 65
Query: 299 SKDGGSDA-GSDITPATS 315
+ A D P+ S
Sbjct: 66 DESQAPTAVPEDAVPSVS 83
>UNIPROTKB|Q00056 [details] [associations]
symbol:HOXA4 "Homeobox protein Hox-A4" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0009653 "anatomical structure morphogenesis" evidence=TAS]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0009952 EMBL:CH471073 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 EMBL:CH236948 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0009653
GO:GO:0048704 KO:K09304 EMBL:AC004080 HOGENOM:HOG000231179
HOVERGEN:HBG016849 CTD:3201 eggNOG:NOG257177 OrthoDB:EOG4GTKF7
EMBL:M74297 EMBL:M28199 IPI:IPI00020926 PIR:A39724
RefSeq:NP_002132.3 UniGene:Hs.533357 UniGene:Hs.721126
ProteinModelPortal:Q00056 SMR:Q00056 STRING:Q00056
PhosphoSite:Q00056 DMDM:116242514 PaxDb:Q00056 PeptideAtlas:Q00056
PRIDE:Q00056 DNASU:3201 Ensembl:ENST00000360046
Ensembl:ENST00000428284 GeneID:3201 KEGG:hsa:3201 UCSC:uc003sym.4
GeneCards:GC07M027170 HGNC:HGNC:5105 MIM:142953 neXtProt:NX_Q00056
PharmGKB:PA29382 InParanoid:Q00056 OMA:PPGKPQT PhylomeDB:Q00056
GenomeRNAi:3201 NextBio:12736 ArrayExpress:Q00056 Bgee:Q00056
CleanEx:HS_HOXA4 Genevestigator:Q00056 GermOnline:ENSG00000197576
Uniprot:Q00056
Length = 320
Score = 280 (103.6 bits), Expect = 1.2e-28, Sum P(2) = 1.2e-28
Identities = 51/62 (82%), Positives = 55/62 (88%)
Query: 237 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
E KR R YTR Q LELEKEFHFNRYLTRRRRIEIAH LCL+ERQ+KIWFQNRRMKWKK+
Sbjct: 214 EPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKD 273
Query: 297 NK 298
+K
Sbjct: 274 HK 275
Score = 54 (24.1 bits), Expect = 1.2e-28, Sum P(2) = 1.2e-28
Identities = 15/49 (30%), Positives = 24/49 (48%)
Query: 70 PRFPPYDRMDIRNAAYYGAH--EGGMEQYPRPDSPSMGHMGPQNGHQTP 116
P+FPP++ +++ GA GG Y +P +P H+ P Q P
Sbjct: 15 PKFPPFEEY-AQHSGSGGADGGPGGGPGYQQPPAPPTQHL-PLQQPQLP 61
Score = 53 (23.7 bits), Expect = 1.6e-28, Sum P(2) = 1.6e-28
Identities = 28/103 (27%), Positives = 35/103 (33%)
Query: 20 PPEHHQQH-HYGATVLPQNNGVEDP--SMYDPRQVHHYGQVPNNGQPVHGMPYPRFPPYD 76
PP QH LP G +P S Y PR P HG +P Y
Sbjct: 45 PPAPPTQHLPLQQPQLPHAGGGREPTASYYAPRTAREPAYPAAALYPAHGAADTAYP-Y- 102
Query: 77 RMDIRNAAYYGAHEGGMEQYPRPDSPSMGHMGPQNG-HQTPVV 118
Y G G P+P+ P GP +G H + V+
Sbjct: 103 -------GYRGGASPGRP--PQPEQPPAQAKGPAHGLHASHVL 136
>UNIPROTKB|P14839 [details] [associations]
symbol:HOXB6 "Homeobox protein Hox-B6" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 EMBL:X16847 IPI:IPI00589688
PIR:S08303 ProteinModelPortal:P14839 SMR:P14839 Uniprot:P14839
Length = 84
Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 58/60 (96%), Positives = 60/60 (100%)
Query: 239 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
+RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAH+LCLTERQIKIWFQNRRMKWKKENK
Sbjct: 8 RRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHSLCLTERQIKIWFQNRRMKWKKENK 67
>UNIPROTKB|F1RZG0 [details] [associations]
symbol:HOXD4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048863 "stem cell
differentiation" evidence=IEA] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0048863
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 GO:GO:0048704
KO:K09304 OMA:EQGADYY EMBL:CU570829 RefSeq:XP_003133546.1
Ensembl:ENSSSCT00000017405 GeneID:100515690 KEGG:ssc:100515690
Uniprot:F1RZG0
Length = 257
Score = 294 (108.6 bits), Expect = 1.6e-28, Sum P(2) = 1.6e-28
Identities = 62/109 (56%), Positives = 73/109 (66%)
Query: 220 TSASLPSPLYPWMRSQF-----------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRR 268
T+ P+ +YPWM+ E KR R YTR Q LELEKEFHFNRYLTRRRR
Sbjct: 126 TALKQPAVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRR 185
Query: 269 IEIAHALCLTERQIKIWFQNRRMKWKKENK--SKDGGSDAGSDITPATS 315
IEIAH LCL+ERQIKIWFQNRRMKWKK++K + G S + S + + S
Sbjct: 186 IEIAHTLCLSERQIKIWFQNRRMKWKKDHKLPNTKGRSSSSSSSSSSCS 234
Score = 39 (18.8 bits), Expect = 1.6e-28, Sum P(2) = 1.6e-28
Identities = 33/110 (30%), Positives = 39/110 (35%)
Query: 1 MSSYFANSYMPDIKNGGVLPP-EHHQQHHY----GATVLP---QNNGVEDPSMYDPRQVH 52
MSSY NS D K PP E + Q Y GA Q + P +Y PR
Sbjct: 3 MSSYMVNSKYVDPK----FPPCEEYLQGGYLGEQGADYYSSGAQGADFQPPGLY-PRP-D 56
Query: 53 HYGQVPNNGQPVHGMPYPRFPPYDRMDIRNAAYYGAHEGGMEQYPRPDSP 102
Q G P G P + +YGA G E P P +P
Sbjct: 57 FSEQTFGGGGPGPGSALPT-RSHGPEPSGPGGHYGA-PG--EPCPAPPAP 102
>UNIPROTKB|F1P8H3 [details] [associations]
symbol:HOXD8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0048705
"skeletal system morphogenesis" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122
GO:GO:0048705 GeneTree:ENSGT00700000104332 KO:K09308 CTD:3234
OMA:GQEYFHP EMBL:AAEX03017789 RefSeq:XP_003434266.1
ProteinModelPortal:F1P8H3 Ensembl:ENSCAFT00000021331
GeneID:100687992 KEGG:cfa:100687992 Uniprot:F1P8H3
Length = 199
Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 60/82 (73%), Positives = 71/82 (86%)
Query: 222 ASLPSPLYPWMRSQFE--RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
+S PS ++PWMR Q R+RGRQTY+R+QTLELEKEF FN YLTR+RRIE++HAL LTE
Sbjct: 88 SSSPSQMFPWMRPQAAPGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALALTE 147
Query: 280 RQIKIWFQNRRMKWKKENKSKD 301
RQ+KIWFQNRRMKWKKEN +KD
Sbjct: 148 RQVKIWFQNRRMKWKKEN-NKD 168
>UNIPROTKB|F8VSA3 [details] [associations]
symbol:HOXD8 "Homeobox protein Hox-D8" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 EMBL:AC009336 IPI:IPI01018181
HGNC:HGNC:5139 ProteinModelPortal:F8VSA3 SMR:F8VSA3
Ensembl:ENST00000548663 ArrayExpress:F8VSA3 Bgee:F8VSA3
Uniprot:F8VSA3
Length = 186
Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 60/82 (73%), Positives = 71/82 (86%)
Query: 222 ASLPSPLYPWMRSQFE--RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
+S PS ++PWMR Q R+RGRQTY+R+QTLELEKEF FN YLTR+RRIE++HAL LTE
Sbjct: 75 SSSPSQMFPWMRPQAAPGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALALTE 134
Query: 280 RQIKIWFQNRRMKWKKENKSKD 301
RQ+KIWFQNRRMKWKKEN +KD
Sbjct: 135 RQVKIWFQNRRMKWKKEN-NKD 155
>UNIPROTKB|F1RZG1 [details] [associations]
symbol:HOXD8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048705 "skeletal
system morphogenesis" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0048705
GeneTree:ENSGT00700000104332 OMA:GQEYFHP EMBL:CU570829
Ensembl:ENSSSCT00000017404 Uniprot:F1RZG1
Length = 221
Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 60/82 (73%), Positives = 71/82 (86%)
Query: 222 ASLPSPLYPWMRSQFE--RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
+S PS ++PWMR Q R+RGRQTY+R+QTLELEKEF FN YLTR+RRIE++HAL LTE
Sbjct: 110 SSSPSQMFPWMRPQAAPGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALALTE 169
Query: 280 RQIKIWFQNRRMKWKKENKSKD 301
RQ+KIWFQNRRMKWKKEN +KD
Sbjct: 170 RQVKIWFQNRRMKWKKEN-NKD 190
>RGD|2321880 [details] [associations]
symbol:LOC100360577 "homeobox A4-like" species:10116 "Rattus
norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 RGD:2321880 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 EMBL:AC122669 IPI:IPI00778476
Ensembl:ENSRNOT00000058985 ArrayExpress:E9PTN3 Uniprot:E9PTN3
Length = 189
Score = 280 (103.6 bits), Expect = 2.0e-28, Sum P(2) = 2.0e-28
Identities = 51/62 (82%), Positives = 55/62 (88%)
Query: 237 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
E KR R YTR Q LELEKEFHFNRYLTRRRRIEIAH LCL+ERQ+KIWFQNRRMKWKK+
Sbjct: 83 EPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKD 142
Query: 297 NK 298
+K
Sbjct: 143 HK 144
Score = 52 (23.4 bits), Expect = 2.0e-28, Sum P(2) = 2.0e-28
Identities = 18/56 (32%), Positives = 25/56 (44%)
Query: 70 PRFPPYDRMDIRNAAYYGAHEGGMEQY------PRPDSPSMGHMGPQNGHQTPVVY 119
P+FPP++ G +GG+ PRP P G GP+ + PVVY
Sbjct: 15 PKFPPFEEFAPHGGP--GGGDGGVGGATTGACTPRPPPP--GPAGPKG--KEPVVY 64
>UNIPROTKB|P09017 [details] [associations]
symbol:HOXC4 "Homeobox protein Hox-C4" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0048562 "embryonic organ morphogenesis"
evidence=IEA] [GO:0051216 "cartilage development" evidence=IEA]
[GO:0071837 "HMG box domain binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=NAS]
[GO:0005634 "nucleus" evidence=NAS] [GO:0007275 "multicellular
organismal development" evidence=NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=NAS] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0051216 eggNOG:NOG314883 KO:K09304 GO:GO:0048562
HOGENOM:HOG000231179 HOVERGEN:HBG016849 OrthoDB:EOG4GTKF7
OMA:ERQYNCA EMBL:X07495 EMBL:AY014298 EMBL:AY014297 EMBL:AC023794
IPI:IPI00295561 PIR:S01030 RefSeq:NP_055435.2 RefSeq:NP_705897.1
UniGene:Hs.549040 ProteinModelPortal:P09017 SMR:P09017
IntAct:P09017 STRING:P09017 PhosphoSite:P09017 DMDM:281185468
PRIDE:P09017 DNASU:3221 Ensembl:ENST00000303406
Ensembl:ENST00000430889 GeneID:3221 KEGG:hsa:3221 UCSC:uc001seu.3
CTD:3221 GeneCards:GC12P054410 H-InvDB:HIX0079410
H-InvDB:HIX0079484 H-InvDB:HIX0171647 HGNC:HGNC:5126 MIM:142974
neXtProt:NX_P09017 PharmGKB:PA29401 InParanoid:P09017
PhylomeDB:P09017 GenomeRNAi:3221 NextBio:12814 Bgee:P09017
Genevestigator:P09017 GermOnline:ENSG00000198353 Uniprot:P09017
Length = 264
Score = 282 (104.3 bits), Expect = 2.5e-28, Sum P(2) = 2.5e-28
Identities = 57/91 (62%), Positives = 67/91 (73%)
Query: 220 TSASLPSPL-YPWMRSQF-----------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRR 267
+SA+ P+ YPWM+ E KR R YTR Q LELEKEFH+NRYLTRRR
Sbjct: 126 SSAASKQPIVYPWMKKIHVSTVNPNYNGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRR 185
Query: 268 RIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
RIEIAH+LCL+ERQIKIWFQNRRMKWKK+++
Sbjct: 186 RIEIAHSLCLSERQIKIWFQNRRMKWKKDHR 216
Score = 49 (22.3 bits), Expect = 2.5e-28, Sum P(2) = 2.5e-28
Identities = 28/90 (31%), Positives = 33/90 (36%)
Query: 53 HYGQVPNNG-QPVHGMPYPRFPPYDRMDIRNAAYYGAHEGGMEQYPRPDSPSMGHMGP-Q 110
+YG+ +G Q H YP PP R Y G P + S GH GP Q
Sbjct: 36 YYGRTRESGFQHHHQELYP--PPPPRPSYPERQYSCTSLQG------PGN-SRGH-GPAQ 85
Query: 111 NGHQTPVVYAS-CKLQAAVGNGIIPGPESP 139
GH P S C+ G P P P
Sbjct: 86 AGHHHPEKSQSLCEPAPLSGASASPSPAPP 115
>FB|FBgn0003339 [details] [associations]
symbol:Scr "Sex combs reduced" species:7227 "Drosophila
melanogaster" [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA;IMP] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS;NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;NAS] [GO:0007494 "midgut development" evidence=TAS]
[GO:0007379 "segment specification" evidence=NAS] [GO:0007381
"specification of segmental identity, labial segment" evidence=TAS]
[GO:0045498 "sex comb development" evidence=IMP;NAS] [GO:0007548
"sex differentiation" evidence=TAS] [GO:0007432 "salivary gland
boundary specification" evidence=NAS;TAS] [GO:0000977 "RNA
polymerase II regulatory region sequence-specific DNA binding"
evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0042803 "protein homodimerization activity"
evidence=IDA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 EMBL:AE014297 GO:GO:0005634
GO:GO:0042803 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 KO:K09311 GO:GO:0007494 EMBL:AE001572
GO:GO:0007548 GO:GO:0000977 GO:GO:0045498 GO:GO:0007432 PDB:2R5Y
PDB:2R5Z PDBsum:2R5Y PDBsum:2R5Z GO:GO:0007381 eggNOG:NOG236516
ChiTaRS:scrib EMBL:X14475 EMBL:X77075 EMBL:X77076 EMBL:U10506
EMBL:X05228 PIR:S03631 RefSeq:NP_524248.2 RefSeq:NP_996165.1
ProteinModelPortal:P09077 SMR:P09077 DIP:DIP-40017N IntAct:P09077
STRING:P09077 EnsemblMetazoa:FBtr0081657 EnsemblMetazoa:FBtr0081658
GeneID:40833 KEGG:dme:Dmel_CG1030 CTD:109559 FlyBase:FBgn0003339
InParanoid:P09077 OMA:ISCKYAN OrthoDB:EOG4H44KH PhylomeDB:P09077
EvolutionaryTrace:P09077 GenomeRNAi:40833 NextBio:820837
Bgee:P09077 GermOnline:CG1030 Uniprot:P09077
Length = 417
Score = 315 (115.9 bits), Expect = 3.1e-28, P = 3.1e-28
Identities = 62/84 (73%), Positives = 67/84 (79%)
Query: 225 PSPLYPWMR----------SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHA 274
P +YPWM+ + E KR R +YTRYQTLELEKEFHFNRYLTRRRRIEIAHA
Sbjct: 301 PPQIYPWMKRVHLGTSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHA 360
Query: 275 LCLTERQIKIWFQNRRMKWKKENK 298
LCLTERQIKIWFQNRRMKWKKE+K
Sbjct: 361 LCLTERQIKIWFQNRRMKWKKEHK 384
>MGI|MGI:96185 [details] [associations]
symbol:Hoxb4 "homeobox B4" species:10090 "Mus musculus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0002011 "morphogenesis of
an epithelial sheet" evidence=IGI] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0009952 "anterior/posterior pattern
specification" evidence=IGI] [GO:0030097 "hemopoiesis"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0048103 "somatic
stem cell division" evidence=IDA] [GO:0048536 "spleen development"
evidence=IMP] [GO:0048539 "bone marrow development" evidence=IMP]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IGI]
[GO:0048705 "skeletal system morphogenesis" evidence=IGI;IMP]
[GO:0060216 "definitive hemopoiesis" evidence=IGI] [GO:0060218
"hematopoietic stem cell differentiation" evidence=ISO] [GO:2000738
"positive regulation of stem cell differentiation" evidence=ISO]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
MGI:MGI:96185 GO:GO:0005634 GO:GO:0009952 GO:GO:0003677
GO:GO:0008283 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0000122 GO:GO:0048536
GO:GO:0048704 GO:GO:0048103 GO:GO:0060216 GO:GO:0002011
eggNOG:NOG314883 KO:K09304 HOGENOM:HOG000231179 HOVERGEN:HBG016849
OrthoDB:EOG4GTKF7 CTD:3214 OMA:RYAACRD GO:GO:0048539 EMBL:M36654
EMBL:AK133945 EMBL:BC095947 IPI:IPI00109338 PIR:A31757
RefSeq:NP_034589.3 UniGene:Mm.3546 ProteinModelPortal:P10284
SMR:P10284 IntAct:P10284 STRING:P10284 PhosphoSite:P10284
PRIDE:P10284 Ensembl:ENSMUST00000049241 GeneID:15412 KEGG:mmu:15412
InParanoid:P10284 NextBio:288134 Bgee:P10284 CleanEx:MM_HOXB4
Genevestigator:P10284 GermOnline:ENSMUSG00000038692 Uniprot:P10284
Length = 250
Score = 287 (106.1 bits), Expect = 3.2e-28, Sum P(2) = 3.2e-28
Identities = 61/107 (57%), Positives = 69/107 (64%)
Query: 221 SASLPSPLYPWMRSQF-----------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRI 269
SA +YPWMR E KR R YTR Q LELEKEFH+NRYLTRRRR+
Sbjct: 133 SACKEPVVYPWMRKVHVSTVNPNYAGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRV 192
Query: 270 EIAHALCLTERQIKIWFQNRRMKWKKENKSKDGGSDAGSDITPATSP 316
EIAHALCL+ERQIKIWFQNRRMKWKK++K + +G A P
Sbjct: 193 EIAHALCLSERQIKIWFQNRRMKWKKDHKLPNTKIRSGGTAGAAGGP 239
Score = 43 (20.2 bits), Expect = 3.2e-28, Sum P(2) = 3.2e-28
Identities = 12/41 (29%), Positives = 19/41 (46%)
Query: 97 PR-PDSPSMGHMGPQNGHQTPVVYASCKLQAAVGNGIIPGP 136
PR P P+ G + P+ G ++ V +S N + P P
Sbjct: 90 PRAPVQPTAGALLPEPGQRSEAVSSSPPPPPCAQNPLHPSP 130
>UNIPROTKB|Q08DG5 [details] [associations]
symbol:HOXB4 "Homeobox protein Hox-B4" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 KO:K09304
HOGENOM:HOG000231179 HOVERGEN:HBG016849 eggNOG:NOG305812
EMBL:BC123761 IPI:IPI00713167 RefSeq:NP_001071582.1
UniGene:Bt.46279 ProteinModelPortal:Q08DG5 SMR:Q08DG5 PRIDE:Q08DG5
GeneID:768240 KEGG:bta:768240 CTD:3214 InParanoid:Q08DG5
NextBio:20918537 Uniprot:Q08DG5
Length = 251
Score = 290 (107.1 bits), Expect = 4.1e-28, Sum P(2) = 4.1e-28
Identities = 64/111 (57%), Positives = 71/111 (63%)
Query: 221 SASLPSPLYPWMRSQF-----------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRI 269
SA +YPWMR E KR R YTR Q LELEKEFH+NRYLTRRRR+
Sbjct: 134 SACKEPVVYPWMRKVHVSTVNPNYAGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRV 193
Query: 270 EIAHALCLTERQIKIWFQNRRMKWKKENKSKD----GGSDAGSDITPATSP 316
EIAHALCL+ERQIKIWFQNRRMKWKK++K + G AGS P P
Sbjct: 194 EIAHALCLSERQIKIWFQNRRMKWKKDHKLPNTKIRSGGTAGSAGGPPGRP 244
Score = 39 (18.8 bits), Expect = 4.1e-28, Sum P(2) = 4.1e-28
Identities = 11/41 (26%), Positives = 17/41 (41%)
Query: 97 PR-PDSPSMGHMGPQNGHQTPVVYASCKLQAAVGNGIIPGP 136
PR P P G + P+ G + + +S N + P P
Sbjct: 91 PRAPAQPPSGALLPEPGQRCEAISSSPPPPPCAQNPLHPSP 131
>UNIPROTKB|F1RWG5 [details] [associations]
symbol:HOXB4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:2000738 "positive
regulation of stem cell differentiation" evidence=IEA] [GO:0060218
"hematopoietic stem cell differentiation" evidence=IEA] [GO:0060216
"definitive hemopoiesis" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0048539 "bone
marrow development" evidence=IEA] [GO:0048536 "spleen development"
evidence=IEA] [GO:0048103 "somatic stem cell division"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0002011
"morphogenesis of an epithelial sheet" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0008283 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0000122 GO:GO:0048536
GO:GO:0048704 GO:GO:0048103 GO:GO:0060216 GO:GO:0002011 KO:K09304
OMA:RYAACRD GO:GO:0048539 EMBL:CU856160 RefSeq:XP_003131596.1
Ensembl:ENSSSCT00000019089 GeneID:100522341 KEGG:ssc:100522341
Uniprot:F1RWG5
Length = 251
Score = 290 (107.1 bits), Expect = 4.1e-28, Sum P(2) = 4.1e-28
Identities = 61/107 (57%), Positives = 70/107 (65%)
Query: 221 SASLPSPLYPWMRSQF-----------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRI 269
SA +YPWMR E KR R YTR Q LELEKEFH+NRYLTRRRR+
Sbjct: 134 SACKEPVVYPWMRKVHVSTVNPNYAGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRV 193
Query: 270 EIAHALCLTERQIKIWFQNRRMKWKKENKSKDGGSDAGSDITPATSP 316
EIAHALCL+ERQIKIWFQNRRMKWKK++K + +G + A P
Sbjct: 194 EIAHALCLSERQIKIWFQNRRMKWKKDHKLPNTKIRSGGPASAAGGP 240
Score = 39 (18.8 bits), Expect = 4.1e-28, Sum P(2) = 4.1e-28
Identities = 12/41 (29%), Positives = 17/41 (41%)
Query: 97 PR-PDSPSMGHMGPQNGHQTPVVYASCKLQAAVGNGIIPGP 136
PR P P G + P+ G + V +S N + P P
Sbjct: 91 PRAPAPPPSGALLPEPGQRCEAVSSSPPPPPCAQNPLHPSP 131
>UNIPROTKB|E2QSM9 [details] [associations]
symbol:HOXC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0071837
"HMG box domain binding" evidence=IEA] [GO:0051216 "cartilage
development" evidence=IEA] [GO:0048562 "embryonic organ
morphogenesis" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0051216 KO:K09304 GO:GO:0048562
OMA:ERQYNCA CTD:3221 EMBL:AAEX03014973 RefSeq:XP_543624.1
RefSeq:XP_856443.1 Ensembl:ENSCAFT00000010661 GeneID:486498
KEGG:cfa:486498 NextBio:20860261 Uniprot:E2QSM9
Length = 264
Score = 282 (104.3 bits), Expect = 4.1e-28, Sum P(2) = 4.1e-28
Identities = 57/91 (62%), Positives = 67/91 (73%)
Query: 220 TSASLPSPL-YPWMRSQF-----------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRR 267
+SA+ P+ YPWM+ E KR R YTR Q LELEKEFH+NRYLTRRR
Sbjct: 126 SSAASKQPIVYPWMKKIHVSTVNPNYNGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRR 185
Query: 268 RIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
RIEIAH+LCL+ERQIKIWFQNRRMKWKK+++
Sbjct: 186 RIEIAHSLCLSERQIKIWFQNRRMKWKKDHR 216
Score = 47 (21.6 bits), Expect = 4.1e-28, Sum P(2) = 4.1e-28
Identities = 28/90 (31%), Positives = 32/90 (35%)
Query: 53 HYGQVPNNG-QPVHGMPYPRFPPYDRMDIRNAAYYGAHEGGMEQYPRPDSPSMGHMGP-Q 110
+YG+ +G Q H YP PP R Y G P S S GH GP Q
Sbjct: 36 YYGRTRESGFQHHHQELYP--PPPPRPSYPERQYSCTSLQG------PGS-SRGH-GPAQ 85
Query: 111 NGHQTPVVYAS-CKLQAAVGNGIIPGPESP 139
GH P C+ G P P P
Sbjct: 86 AGHHHPEKSQPLCEPAPLSGASASPSPAPP 115
>MGI|MGI:96209 [details] [associations]
symbol:Hoxd8 "homeobox D8" species:10090 "Mus musculus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IGI] [GO:0003674
"molecular_function" evidence=ND] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IGI;IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0048705 "skeletal system morphogenesis"
evidence=IGI;IMP] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 MGI:MGI:96209
GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231181 GO:GO:0000122 GO:GO:0048705
HOVERGEN:HBG016849 GeneTree:ENSGT00700000104332 eggNOG:NOG314669
OrthoDB:EOG4H464V KO:K09308 EMBL:AL928644 CTD:3234 OMA:GQEYFHP
EMBL:X56561 EMBL:M87803 IPI:IPI00828631 PIR:A43562 PIR:S16177
RefSeq:NP_032302.2 UniGene:Mm.280673 ProteinModelPortal:P23463
STRING:P23463 PhosphoSite:P23463 PRIDE:P23463
Ensembl:ENSMUST00000019749 GeneID:15437 KEGG:mmu:15437
InParanoid:P23463 NextBio:288214 CleanEx:MM_HOXD8
Genevestigator:P23463 GermOnline:ENSMUSG00000027102 Uniprot:P23463
Length = 289
Score = 313 (115.2 bits), Expect = 5.0e-28, P = 5.0e-28
Identities = 59/82 (71%), Positives = 70/82 (85%)
Query: 222 ASLPSPLYPWMRSQFE--RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
+S PS ++PWMR Q R+RGRQTY+R+QTLELEKEF FN YLTR+RRIE++H L LTE
Sbjct: 177 SSSPSQMFPWMRPQAAPGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHTLALTE 236
Query: 280 RQIKIWFQNRRMKWKKENKSKD 301
RQ+KIWFQNRRMKWKKEN +KD
Sbjct: 237 RQVKIWFQNRRMKWKKEN-NKD 257
>UNIPROTKB|P17483 [details] [associations]
symbol:HOXB4 "Homeobox protein Hox-B4" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0002011 "morphogenesis of
an epithelial sheet" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0048103 "somatic stem cell
division" evidence=IEA] [GO:0048536 "spleen development"
evidence=IEA] [GO:0048539 "bone marrow development" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
[GO:0060216 "definitive hemopoiesis" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=NAS]
[GO:0005634 "nucleus" evidence=NAS] [GO:0007275 "multicellular
organismal development" evidence=NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=NAS] [GO:2000738 "positive regulation of stem cell
differentiation" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0060218 "hematopoietic stem cell differentiation" evidence=IDA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0009952 GO:GO:0008283 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122
GO:GO:0060218 GO:GO:0048536 GO:GO:0048704 GO:GO:0048103
GO:GO:0060216 GO:GO:0002011 eggNOG:NOG314883 KO:K09304
GO:GO:2000738 HOGENOM:HOG000231179 HOVERGEN:HBG016849
OrthoDB:EOG4GTKF7 EMBL:AF287967 CTD:3214 EMBL:X16174 EMBL:AF307160
EMBL:BC049204 EMBL:AL137449 IPI:IPI00014540 PIR:B60492 PIR:T46446
RefSeq:NP_076920.1 UniGene:Hs.664706 ProteinModelPortal:P17483
SMR:P17483 STRING:P17483 PhosphoSite:P17483 DMDM:547692
PaxDb:P17483 PeptideAtlas:P17483 PRIDE:P17483
Ensembl:ENST00000332503 GeneID:3214 KEGG:hsa:3214 UCSC:uc002inp.3
GeneCards:GC17M046652 HGNC:HGNC:5115 MIM:142965 neXtProt:NX_P17483
PharmGKB:PA29391 InParanoid:P17483 OMA:RYAACRD GenomeRNAi:3214
NextBio:12788 Bgee:P17483 CleanEx:HS_HOXB4 Genevestigator:P17483
GermOnline:ENSG00000182742 GO:GO:0048539 Uniprot:P17483
Length = 251
Score = 289 (106.8 bits), Expect = 5.2e-28, Sum P(2) = 5.2e-28
Identities = 64/111 (57%), Positives = 71/111 (63%)
Query: 221 SASLPSPLYPWMRSQF-----------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRI 269
SA +YPWMR E KR R YTR Q LELEKEFH+NRYLTRRRR+
Sbjct: 134 SACKEPVVYPWMRKVHVSTVNPNYAGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRV 193
Query: 270 EIAHALCLTERQIKIWFQNRRMKWKKENKSKD----GGSDAGSDITPATSP 316
EIAHALCL+ERQIKIWFQNRRMKWKK++K + G AGS P P
Sbjct: 194 EIAHALCLSERQIKIWFQNRRMKWKKDHKLPNTKIRSGGAAGSAGGPPGRP 244
Score = 39 (18.8 bits), Expect = 5.2e-28, Sum P(2) = 5.2e-28
Identities = 12/41 (29%), Positives = 17/41 (41%)
Query: 97 PR-PDSPSMGHMGPQNGHQTPVVYASCKLQAAVGNGIIPGP 136
PR P P G + P+ G + V +S N + P P
Sbjct: 91 PRAPAPPPAGALLPEPGQRCEAVSSSPPPPPCAQNPLHPSP 131
>UNIPROTKB|F1NZJ4 [details] [associations]
symbol:HOXD8 "Homeobox protein Hox-D8" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00700000104054 EMBL:AADN02020025 EMBL:AADN02020026
EMBL:AADN02020027 EMBL:AADN02020028 EMBL:AADN02020029
EMBL:AADN02020030 IPI:IPI00818317 Ensembl:ENSGALT00000038689
ArrayExpress:F1NZJ4 Uniprot:F1NZJ4
Length = 168
Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
Identities = 59/82 (71%), Positives = 71/82 (86%)
Query: 222 ASLPSPLYPWMRSQFE--RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
+S P+ ++PWMR Q R+RGRQTY+R+QTLELEKEF FN YLTR+RRIE++HAL LTE
Sbjct: 57 SSSPAQMFPWMRPQAAPGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALGLTE 116
Query: 280 RQIKIWFQNRRMKWKKENKSKD 301
RQ+KIWFQNRRMKWKKEN +KD
Sbjct: 117 RQVKIWFQNRRMKWKKEN-NKD 137
>UNIPROTKB|F1P4U9 [details] [associations]
symbol:HOXD8 "Homeobox protein Hox-D8" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00700000104054 IPI:IPI00576774 EMBL:AADN02020025
EMBL:AADN02020026 EMBL:AADN02020027 EMBL:AADN02020028
EMBL:AADN02020029 EMBL:AADN02020030 Ensembl:ENSGALT00000015083
ArrayExpress:F1P4U9 Uniprot:F1P4U9
Length = 148
Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
Identities = 59/82 (71%), Positives = 71/82 (86%)
Query: 222 ASLPSPLYPWMRSQFE--RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
+S P+ ++PWMR Q R+RGRQTY+R+QTLELEKEF FN YLTR+RRIE++HAL LTE
Sbjct: 37 SSSPAQMFPWMRPQAAPGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALGLTE 96
Query: 280 RQIKIWFQNRRMKWKKENKSKD 301
RQ+KIWFQNRRMKWKKEN +KD
Sbjct: 97 RQVKIWFQNRRMKWKKEN-NKD 117
>UNIPROTKB|P23459 [details] [associations]
symbol:HOXD8 "Homeobox protein Hox-D8" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 HOVERGEN:HBG016849 KO:K09308 EMBL:X57158
IPI:IPI00576774 PIR:I50145 RefSeq:NP_997060.1 UniGene:Gga.3187
ProteinModelPortal:P23459 SMR:P23459 GeneID:396301 KEGG:gga:396301
CTD:3234 NextBio:20816351 Uniprot:P23459
Length = 188
Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
Identities = 59/82 (71%), Positives = 71/82 (86%)
Query: 222 ASLPSPLYPWMRSQFE--RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
+S P+ ++PWMR Q R+RGRQTY+R+QTLELEKEF FN YLTR+RRIE++HAL LTE
Sbjct: 77 SSSPAQMFPWMRPQAAPGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALGLTE 136
Query: 280 RQIKIWFQNRRMKWKKENKSKD 301
RQ+KIWFQNRRMKWKKEN +KD
Sbjct: 137 RQVKIWFQNRRMKWKKEN-NKD 157
>RGD|1560113 [details] [associations]
symbol:Hoxb4 "homeo box B4" species:10116 "Rattus norvegicus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO] [GO:0002011
"morphogenesis of an epithelial sheet" evidence=IEA;ISO]
[GO:0003677 "DNA binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008283 "cell
proliferation" evidence=IEA;ISO] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA;ISO] [GO:0030097 "hemopoiesis"
evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0048103
"somatic stem cell division" evidence=IEA;ISO] [GO:0048536 "spleen
development" evidence=IEA;ISO] [GO:0048539 "bone marrow
development" evidence=IEA;ISO] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA;ISO] [GO:0048705 "skeletal
system morphogenesis" evidence=ISO] [GO:0060216 "definitive
hemopoiesis" evidence=IEA;ISO] [GO:0060218 "hematopoietic stem cell
differentiation" evidence=IEA;ISO] [GO:2000738 "positive regulation
of stem cell differentiation" evidence=IEA;ISO] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1560113
GO:GO:0005634 GO:GO:0009952 GO:GO:0008283 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 GO:GO:0000122
GO:GO:0048536 GO:GO:0048704 EMBL:CH473948 GO:GO:0048103
GO:GO:0060216 GO:GO:0002011 eggNOG:NOG314883 KO:K09304
HOGENOM:HOG000231179 HOVERGEN:HBG016849 OrthoDB:EOG4GTKF7 CTD:3214
OMA:RYAACRD GO:GO:0048539 EMBL:BC161863 IPI:IPI00199999
RefSeq:NP_001094257.1 UniGene:Rn.209614 SMR:B1WBS2 STRING:B1WBS2
Ensembl:ENSRNOT00000010965 GeneID:497988 KEGG:rno:497988
NextBio:698314 Genevestigator:B1WBS2 Uniprot:B1WBS2
Length = 250
Score = 287 (106.1 bits), Expect = 8.4e-28, Sum P(2) = 8.4e-28
Identities = 61/107 (57%), Positives = 69/107 (64%)
Query: 221 SASLPSPLYPWMRSQF-----------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRI 269
SA +YPWMR E KR R YTR Q LELEKEFH+NRYLTRRRR+
Sbjct: 133 SACKEPVVYPWMRKVHVSTVNPNYAGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRV 192
Query: 270 EIAHALCLTERQIKIWFQNRRMKWKKENKSKDGGSDAGSDITPATSP 316
EIAHALCL+ERQIKIWFQNRRMKWKK++K + +G A P
Sbjct: 193 EIAHALCLSERQIKIWFQNRRMKWKKDHKLPNTKIRSGGTAGAAGGP 239
Score = 39 (18.8 bits), Expect = 8.4e-28, Sum P(2) = 8.4e-28
Identities = 12/41 (29%), Positives = 19/41 (46%)
Query: 97 PR-PDSPSMGHMGPQNGHQTPVVYASCKLQAAVGNGIIPGP 136
PR P + G + P+ G ++ VV +S N + P P
Sbjct: 90 PRAPVQSTAGALLPEPGQRSEVVSSSPPPPPCAQNPLHPSP 130
>UNIPROTKB|A4FUC1 [details] [associations]
symbol:HOXC4 "HOXC4 protein" species:9913 "Bos taurus"
[GO:0005634 "nucleus" evidence=IEA] [GO:0071837 "HMG box domain
binding" evidence=IEA] [GO:0051216 "cartilage development"
evidence=IEA] [GO:0048562 "embryonic organ morphogenesis"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0051216 eggNOG:NOG314883
KO:K09304 GO:GO:0048562 HOGENOM:HOG000231179 HOVERGEN:HBG016849
OrthoDB:EOG4GTKF7 OMA:ERQYNCA CTD:3221 EMBL:DAAA02012839
EMBL:BC114690 IPI:IPI00729483 RefSeq:NP_001095843.1
UniGene:Bt.29064 STRING:A4FUC1 Ensembl:ENSBTAT00000004277
GeneID:613740 KEGG:bta:613740 InParanoid:A4FUC1 NextBio:20898740
Uniprot:A4FUC1
Length = 264
Score = 282 (104.3 bits), Expect = 8.4e-28, Sum P(2) = 8.4e-28
Identities = 57/91 (62%), Positives = 67/91 (73%)
Query: 220 TSASLPSPL-YPWMRSQF-----------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRR 267
+SA+ P+ YPWM+ E KR R YTR Q LELEKEFH+NRYLTRRR
Sbjct: 126 SSAASKQPIVYPWMKKIHVSTVNPNYNGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRR 185
Query: 268 RIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
RIEIAH+LCL+ERQIKIWFQNRRMKWKK+++
Sbjct: 186 RIEIAHSLCLSERQIKIWFQNRRMKWKKDHR 216
Score = 44 (20.5 bits), Expect = 8.4e-28, Sum P(2) = 8.4e-28
Identities = 27/90 (30%), Positives = 32/90 (35%)
Query: 53 HYGQVPNNG-QPVHGMPYPRFPPYDRMDIRNAAYYGAHEGGMEQYPRPDSPSMGHMGP-Q 110
+YG+ +G Q H YP PP R Y G P + S GH GP Q
Sbjct: 36 YYGRTRESGFQHHHQELYP--PPPPRPSYPERQYSCTSLQG------PGN-SRGH-GPAQ 85
Query: 111 NGHQTPVVYAS-CKLQAAVGNGIIPGPESP 139
GH P C+ G P P P
Sbjct: 86 AGHHHPEKSQPLCEPAPLSGASASPSPAPP 115
>UNIPROTKB|F1SR58 [details] [associations]
symbol:HOXC4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0071837 "HMG box
domain binding" evidence=IEA] [GO:0051216 "cartilage development"
evidence=IEA] [GO:0048562 "embryonic organ morphogenesis"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0051216 KO:K09304 GO:GO:0048562
OMA:ERQYNCA EMBL:CU633419 RefSeq:XP_001925163.2
Ensembl:ENSSSCT00000000306 GeneID:100154759 KEGG:ssc:100154759
Uniprot:F1SR58
Length = 264
Score = 282 (104.3 bits), Expect = 8.4e-28, Sum P(2) = 8.4e-28
Identities = 57/91 (62%), Positives = 67/91 (73%)
Query: 220 TSASLPSPL-YPWMRSQF-----------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRR 267
+SA+ P+ YPWM+ E KR R YTR Q LELEKEFH+NRYLTRRR
Sbjct: 126 SSAASKQPIVYPWMKKIHVSTVNPNYNGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRR 185
Query: 268 RIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
RIEIAH+LCL+ERQIKIWFQNRRMKWKK+++
Sbjct: 186 RIEIAHSLCLSERQIKIWFQNRRMKWKKDHR 216
Score = 44 (20.5 bits), Expect = 8.4e-28, Sum P(2) = 8.4e-28
Identities = 27/90 (30%), Positives = 32/90 (35%)
Query: 53 HYGQVPNNG-QPVHGMPYPRFPPYDRMDIRNAAYYGAHEGGMEQYPRPDSPSMGHMGP-Q 110
+YG+ +G Q H YP PP R Y G P + S GH GP Q
Sbjct: 36 YYGRTRESGFQHHHQELYP--PPPPRPSYPERQYSCTSLQG------PGN-SRGH-GPAQ 85
Query: 111 NGHQTPVVYAS-CKLQAAVGNGIIPGPESP 139
GH P C+ G P P P
Sbjct: 86 AGHHHPEKSQPLCEPAPLSGASASPSPAPP 115
>UNIPROTKB|P14838 [details] [associations]
symbol:HOXB5 "Homeobox protein Hox-B5" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104189
eggNOG:NOG305812 EMBL:X16846 IPI:IPI00570687 PIR:S08302
UniGene:Gga.22931 ProteinModelPortal:P14838 SMR:P14838
STRING:P14838 Ensembl:ENSGALT00000029223 ArrayExpress:P14838
Uniprot:P14838
Length = 82
Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 60/75 (80%), Positives = 63/75 (84%)
Query: 239 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+ERQIKIWFQNRRMKWKK+NK
Sbjct: 8 KRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNK 67
Query: 299 SKDGG-SDAGSDITP 312
K + AGS P
Sbjct: 68 LKSMSLASAGSAFQP 82
>UNIPROTKB|F1MEU5 [details] [associations]
symbol:HOXC6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048706 "embryonic
skeletal system development" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0048706 KO:K09306 OMA:MNSYFAN
CTD:3223 EMBL:DAAA02012839 IPI:IPI00704983 RefSeq:XP_002687279.1
RefSeq:XP_869789.3 UniGene:Bt.105698 ProteinModelPortal:F1MEU5
Ensembl:ENSBTAT00000012174 GeneID:317660 KEGG:bta:317660
NextBio:20807136 Uniprot:F1MEU5
Length = 235
Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 63/95 (66%), Positives = 71/95 (74%)
Query: 228 LYPWMRSQ---------FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWM+ +R+RGRQ Y+RYQTLELEKEFHFNRYLTRRRRIEIA+ALCLT
Sbjct: 122 IYPWMQRMNSHSGVGYGADRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLT 181
Query: 279 ERQIKIWFQNRRMKWKKENKSKD----GGSDAGSD 309
ERQIKIWFQNRRMKWKKE+ GG A +D
Sbjct: 182 ERQIKIWFQNRRMKWKKESNLTSTLSGGGGGAAAD 216
>UNIPROTKB|E2QSK8 [details] [associations]
symbol:HOXC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0048706
"embryonic skeletal system development" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0048706 KO:K09306 OMA:MNSYFAN
CTD:3223 EMBL:AAEX03014973 RefSeq:XP_003433616.1
Ensembl:ENSCAFT00000010669 GeneID:486499 KEGG:cfa:486499
NextBio:20860262 Uniprot:E2QSK8
Length = 235
Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 63/95 (66%), Positives = 71/95 (74%)
Query: 228 LYPWMRSQ---------FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWM+ +R+RGRQ Y+RYQTLELEKEFHFNRYLTRRRRIEIA+ALCLT
Sbjct: 122 IYPWMQRMNSHSGVGYGADRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLT 181
Query: 279 ERQIKIWFQNRRMKWKKENKSKD----GGSDAGSD 309
ERQIKIWFQNRRMKWKKE+ GG A +D
Sbjct: 182 ERQIKIWFQNRRMKWKKESNLTSTLSGGGGGAAAD 216
>UNIPROTKB|I3L9Q6 [details] [associations]
symbol:HOXC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048706 "embryonic
skeletal system development" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0048706 KO:K09306 OMA:MNSYFAN
EMBL:FP579005 RefSeq:XP_003355472.1 ProteinModelPortal:I3L9Q6
Ensembl:ENSSSCT00000032524 GeneID:100627932 KEGG:ssc:100627932
Uniprot:I3L9Q6
Length = 235
Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 63/95 (66%), Positives = 71/95 (74%)
Query: 228 LYPWMRSQ---------FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWM+ +R+RGRQ Y+RYQTLELEKEFHFNRYLTRRRRIEIA+ALCLT
Sbjct: 122 IYPWMQRMNSHSGVGYGADRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLT 181
Query: 279 ERQIKIWFQNRRMKWKKENKSKD----GGSDAGSD 309
ERQIKIWFQNRRMKWKKE+ GG A +D
Sbjct: 182 ERQIKIWFQNRRMKWKKESNLTSTLSGGGGGAAAD 216
>UNIPROTKB|F1LWY9 [details] [associations]
symbol:F1LWY9 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122
GO:GO:0048705 GeneTree:ENSGT00700000104332 IPI:IPI00957183
Ensembl:ENSRNOT00000067861 Uniprot:F1LWY9
Length = 181
Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 57/78 (73%), Positives = 67/78 (85%)
Query: 222 ASLPSPLYPWMRSQFE--RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
+S PS ++PWMR Q R+RGRQTY+R+QTLELEKEF FN YLTR+RRIE++H L LTE
Sbjct: 70 SSSPSQMFPWMRPQAAPGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHTLALTE 129
Query: 280 RQIKIWFQNRRMKWKKEN 297
RQ+KIWFQNRRMKWKKEN
Sbjct: 130 RQVKIWFQNRRMKWKKEN 147
>UNIPROTKB|P09630 [details] [associations]
symbol:HOXC6 "Homeobox protein Hox-C6" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0048706 "embryonic skeletal system
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=TAS]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=TAS] [GO:0007275 "multicellular organismal
development" evidence=TAS] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0003714 GO:GO:0009952 GO:GO:0043565
EMBL:CH471054 GO:GO:0003700 GO:GO:0006357 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
HOGENOM:HOG000231181 GO:GO:0048706 HOVERGEN:HBG016849 KO:K09306
UniGene:Hs.549040 eggNOG:NOG266030 OMA:MNSYFAN OrthoDB:EOG41NTMZ
EMBL:S82986 EMBL:M16938 EMBL:AK314829 EMBL:BC074844 EMBL:BC074845
IPI:IPI00015921 IPI:IPI00221294 PIR:B28030 RefSeq:NP_004494.1
RefSeq:NP_710160.1 ProteinModelPortal:P09630 SMR:P09630
STRING:P09630 PhosphoSite:P09630 DMDM:115502398 PRIDE:P09630
Ensembl:ENST00000243108 Ensembl:ENST00000394331 GeneID:3223
KEGG:hsa:3223 UCSC:uc001ses.3 CTD:3223 GeneCards:GC12P054384
HGNC:HGNC:5128 MIM:142972 neXtProt:NX_P09630 PharmGKB:PA29403
InParanoid:P09630 PhylomeDB:P09630 GenomeRNAi:3223 NextBio:12825
ArrayExpress:P09630 Bgee:P09630 CleanEx:HS_HOXC6
Genevestigator:P09630 GermOnline:ENSG00000197757 Uniprot:P09630
Length = 235
Score = 309 (113.8 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 62/93 (66%), Positives = 69/93 (74%)
Query: 228 LYPWMRSQ---------FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWM+ +R+RGRQ Y+RYQTLELEKEFHFNRYLTRRRRIEIA+ALCLT
Sbjct: 122 IYPWMQRMNSHSGVGYGADRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLT 181
Query: 279 ERQIKIWFQNRRMKWKKENKSKDGGSDAGSDIT 311
ERQIKIWFQNRRMKWKKE+ S G T
Sbjct: 182 ERQIKIWFQNRRMKWKKESNLTSTLSGGGGGAT 214
>MGI|MGI:96197 [details] [associations]
symbol:Hoxc6 "homeobox C6" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IGI] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048706 "embryonic skeletal system development"
evidence=IGI] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 MGI:MGI:96197
GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231181 GeneTree:ENSGT00700000104090
GO:GO:0048706 HOVERGEN:HBG016849 KO:K09306 eggNOG:NOG266030
OMA:MNSYFAN OrthoDB:EOG41NTMZ CTD:3223 EMBL:J03074 EMBL:M35986
EMBL:X16511 EMBL:X16510 EMBL:S74185 EMBL:X12504 EMBL:X16838
IPI:IPI00310548 IPI:IPI00387269 PIR:A32167 PIR:A56568 PIR:S00987
RefSeq:NP_034595.2 UniGene:Mm.4444 ProteinModelPortal:P10629
SMR:P10629 STRING:P10629 PhosphoSite:P10629 PRIDE:P10629
Ensembl:ENSMUST00000001711 GeneID:15425 KEGG:mmu:15425
InParanoid:P10629 ChiTaRS:HOXC6 NextBio:288174 Bgee:P10629
CleanEx:MM_HOXC6 Genevestigator:P10629
GermOnline:ENSMUSG00000001661 Uniprot:P10629
Length = 235
Score = 309 (113.8 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 62/93 (66%), Positives = 69/93 (74%)
Query: 228 LYPWMRSQ---------FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWM+ +R+RGRQ Y+RYQTLELEKEFHFNRYLTRRRRIEIA+ALCLT
Sbjct: 122 IYPWMQRMNSHSGVGYGADRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLT 181
Query: 279 ERQIKIWFQNRRMKWKKENKSKDGGSDAGSDIT 311
ERQIKIWFQNRRMKWKKE+ S G T
Sbjct: 182 ERQIKIWFQNRRMKWKKESNLTSTLSGGGGGAT 214
>UNIPROTKB|G3V841 [details] [associations]
symbol:Hoxc6 "Homeo box C6" species:10116 "Rattus
norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0048706 "embryonic skeletal system
development" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 EMBL:CH474035 KO:K09306 OMA:MNSYFAN
CTD:3223 EMBL:AC116663 RefSeq:XP_001069410.2 RefSeq:XP_003750463.1
ProteinModelPortal:G3V841 SMR:G3V841 PRIDE:G3V841
Ensembl:ENSRNOT00000022217 GeneID:252885 KEGG:rno:252885
Uniprot:G3V841
Length = 235
Score = 309 (113.8 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 62/93 (66%), Positives = 69/93 (74%)
Query: 228 LYPWMRSQ---------FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWM+ +R+RGRQ Y+RYQTLELEKEFHFNRYLTRRRRIEIA+ALCLT
Sbjct: 122 IYPWMQRMNSHSGVGYGADRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLT 181
Query: 279 ERQIKIWFQNRRMKWKKENKSKDGGSDAGSDIT 311
ERQIKIWFQNRRMKWKKE+ S G T
Sbjct: 182 ERQIKIWFQNRRMKWKKESNLTSTLSGGGGGAT 214
>UNIPROTKB|E2RGY0 [details] [associations]
symbol:HOXD4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 OMA:EQGADYY EMBL:AAEX03017790
EMBL:AAEX03017791 Ensembl:ENSCAFT00000021336 Uniprot:E2RGY0
Length = 254
Score = 282 (104.3 bits), Expect = 2.2e-27, Sum P(2) = 2.2e-27
Identities = 55/74 (74%), Positives = 60/74 (81%)
Query: 237 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
E KR R YTR Q LELEKEFHFNRYLTRRRRIEIAH LCL+ERQIKIWFQNRRMKWKK+
Sbjct: 150 EPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKD 209
Query: 297 NK--SKDGGSDAGS 308
+K + G S + S
Sbjct: 210 HKLPNTKGRSSSSS 223
Score = 40 (19.1 bits), Expect = 2.2e-27, Sum P(2) = 2.2e-27
Identities = 25/79 (31%), Positives = 30/79 (37%)
Query: 1 MSSYFANSYMPDIK--------NGGVLPPEHHQQHHYGATVLPQNNGVEDPSMYDPRQVH 52
MSSY NS D K GG L + +YG V Q + P +Y PR
Sbjct: 3 MSSYMVNSKYVDPKFPPCEEYLQGGYLGEQGAD--YYGGGV--QGADFQPPGLY-PRP-- 55
Query: 53 HYG-QVPNNGQPVHGMPYP 70
+G Q G P G P
Sbjct: 56 DFGEQTFGGGGPGPGSALP 74
>FB|FBgn0000014 [details] [associations]
symbol:abd-A "abdominal A" species:7227 "Drosophila
melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=NAS;IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0008406 "gonad
development" evidence=NAS;TAS] [GO:0007422 "peripheral nervous
system development" evidence=TAS] [GO:0035224 "genital disc
anterior/posterior pattern formation" evidence=IEP] [GO:0007506
"gonadal mesoderm development" evidence=IMP] [GO:0008354 "germ cell
migration" evidence=IMP;TAS] [GO:0007280 "pole cell migration"
evidence=TAS] [GO:0007494 "midgut development" evidence=TAS]
[GO:0007385 "specification of segmental identity, abdomen"
evidence=NAS] [GO:0007438 "oenocyte development" evidence=IMP]
[GO:0035053 "dorsal vessel heart proper cell fate commitment"
evidence=IEP;IMP;TAS] [GO:0007507 "heart development" evidence=IMP]
[GO:0007501 "mesodermal cell fate specification" evidence=IMP]
[GO:0007399 "nervous system development" evidence=IMP] [GO:0006915
"apoptotic process" evidence=IMP] [GO:0009987 "cellular process"
evidence=IMP] [GO:0007400 "neuroblast fate determination"
evidence=IMP] [GO:0035225 "determination of genital disc
primordium" evidence=IMP] [GO:0048806 "genitalia development"
evidence=IMP] [GO:0010002 "cardioblast differentiation"
evidence=IMP] [GO:0048738 "cardiac muscle tissue development"
evidence=IMP] [GO:0005667 "transcription factor complex"
evidence=IPI] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0014019 "neuroblast development" evidence=IMP]
[GO:0048636 "positive regulation of muscle organ development"
evidence=IMP] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0042694 "muscle
cell fate specification" evidence=IMP] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 EMBL:AE014297
GO:GO:0006915 GO:GO:0007280 GO:GO:0042694 GO:GO:0048636
GO:GO:0043565 GO:GO:0045944 GO:GO:0007422 eggNOG:NOG328968
Gene3D:1.10.10.60 InterPro:IPR022132 InterPro:IPR020479
Pfam:PF12407 PRINTS:PR00024 SUPFAM:SSF46689 EMBL:X54453 EMBL:U31961
EMBL:BT016031 PIR:A35915 RefSeq:NP_001163632.1
RefSeq:NP_001247145.1 RefSeq:NP_476693.1 RefSeq:NP_732176.1
UniGene:Dm.3286 ProteinModelPortal:P29555 SMR:P29555 DIP:DIP-17987N
MINT:MINT-344957 STRING:P29555 EnsemblMetazoa:FBtr0083388
GeneID:42037 KEGG:dme:Dmel_CG10325 CTD:42037 FlyBase:FBgn0000014
GeneTree:ENSGT00700000104090 InParanoid:P29555 KO:K09311
OMA:QPFISSH OrthoDB:EOG4VHHQ4 PhylomeDB:P29555 GenomeRNAi:42037
NextBio:826865 Bgee:P29555 GermOnline:CG10325 GO:GO:0005667
GO:GO:0003705 GO:GO:0048738 GO:GO:0010002 GO:GO:0035225
GO:GO:0035053 GO:GO:0035224 GO:GO:0048806 GO:GO:0007506
GO:GO:0007501 GO:GO:0007494 GO:GO:0014019 GO:GO:0007400
GO:GO:0007438 Uniprot:P29555
Length = 590
Score = 294 (108.6 bits), Expect = 4.9e-27, Sum P(2) = 4.9e-27
Identities = 58/73 (79%), Positives = 63/73 (86%)
Query: 238 RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 297
R+RGRQTYTR+QTLELEKEFHFN YLTRRRRIEIAHALCLTERQIKIWFQNRRMK KKE
Sbjct: 398 RRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKEL 457
Query: 298 KS-KDGGSDAGSD 309
++ K+ A D
Sbjct: 458 RAVKEINEQARRD 470
Score = 39 (18.8 bits), Expect = 4.9e-27, Sum P(2) = 4.9e-27
Identities = 7/13 (53%), Positives = 8/13 (61%)
Query: 15 NGGVLPPEHHQQH 27
+GG L P H QH
Sbjct: 94 SGGSLSPSHLSQH 106
>ZFIN|ZDB-GENE-000823-4 [details] [associations]
symbol:hoxa4a "homeo box A4a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-000823-4 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
EMBL:CR382300 EMBL:AF071246 EMBL:BC122457 EMBL:DQ060533 EMBL:M76382
EMBL:Y13947 IPI:IPI00487552 PIR:S34415 RefSeq:NP_571610.1
UniGene:Dr.159437 ProteinModelPortal:Q9PWL5 SMR:Q9PWL5
Ensembl:ENSDART00000080466 GeneID:58050 KEGG:dre:58050 CTD:58050
eggNOG:NOG317510 HOGENOM:HOG000231179 HOVERGEN:HBG016849
InParanoid:Q9PWL5 OMA:PGDYYER OrthoDB:EOG4S1T87 NextBio:20892314
Bgee:Q9PWL5 Uniprot:Q9PWL5
Length = 245
Score = 274 (101.5 bits), Expect = 5.8e-27, Sum P(2) = 5.8e-27
Identities = 48/60 (80%), Positives = 54/60 (90%)
Query: 239 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
KR R YTR Q LELEKEFHFNRYLTRRRR+EIAH +CL+ERQ+KIWFQNRRMKWKK++K
Sbjct: 148 KRSRTAYTRQQALELEKEFHFNRYLTRRRRVEIAHTMCLSERQVKIWFQNRRMKWKKDHK 207
Score = 44 (20.5 bits), Expect = 5.8e-27, Sum P(2) = 5.8e-27
Identities = 17/67 (25%), Positives = 28/67 (41%)
Query: 46 YDPRQVHHYGQVPNNGQPVHG-MPYPRFPPYDRM-DIRNAAYYGAHEGGMEQYPRPDSPS 103
Y P +Y + + G P H YPR ++ D N + ++ + +P S S
Sbjct: 28 YMPVSSDYYERPKDPGFPHHEEASYPRSNYQEQSYDYGNVSTNDLNDFSDRHHAQPQSVS 87
Query: 104 MGHMGPQ 110
H GP+
Sbjct: 88 QNH-GPR 93
Score = 42 (19.8 bits), Expect = 9.4e-27, Sum P(2) = 9.4e-27
Identities = 18/57 (31%), Positives = 23/57 (40%)
Query: 4 YFANSYMPDIKNGGVLPPEHHQQHHYGATVLPQNNGVEDPSMYDPRQVHHYGQVPNN 60
Y N YMP + P + HH A+ P++N E YD YG V N
Sbjct: 23 YHQNGYMPVSSDYYERPKDPGFPHHEEASY-PRSNYQEQS--YD------YGNVSTN 70
>FB|FBgn0003944 [details] [associations]
symbol:Ubx "Ultrabithorax" species:7227 "Drosophila
melanogaster" [GO:0005634 "nucleus" evidence=ISS;NAS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS;IDA] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0000980 "RNA polymerase
II distal enhancer sequence-specific DNA binding" evidence=IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;NAS;TAS] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0019904 "protein domain specific binding" evidence=IPI]
[GO:0010092 "specification of organ identity" evidence=IMP]
[GO:0007482 "haltere development" evidence=IMP] [GO:0007494 "midgut
development" evidence=TAS] [GO:0007385 "specification of segmental
identity, abdomen" evidence=NAS] [GO:0007384 "specification of
segmental identity, thorax" evidence=IMP;NAS] [GO:0001706 "endoderm
formation" evidence=TAS] [GO:0007507 "heart development"
evidence=IEP;IMP] [GO:0007501 "mesodermal cell fate specification"
evidence=IMP] [GO:0007480 "imaginal disc-derived leg morphogenesis"
evidence=IMP] [GO:0035052 "dorsal vessel aortic cell fate
commitment" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007424 "open tracheal system development"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0045570 "regulation of imaginal disc growth"
evidence=IMP] [GO:0048636 "positive regulation of muscle organ
development" evidence=IMP] [GO:0001709 "cell fate determination"
evidence=IGI;IMP] [GO:0042694 "muscle cell fate specification"
evidence=IMP] [GO:0061327 "anterior Malpighian tubule development"
evidence=IMP] [GO:0060969 "negative regulation of gene silencing"
evidence=IDA] [GO:0042659 "regulation of cell fate specification"
evidence=IMP] [GO:0007525 "somatic muscle development"
evidence=IMP] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 EMBL:AE014297
GO:GO:0042694 GO:GO:0048636 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
EMBL:U31961 GeneTree:ENSGT00700000104090 KO:K09311 GO:GO:0005667
GO:GO:0007501 GO:GO:0007494 GO:GO:0000980 GO:GO:0000122
GO:GO:0007480 GO:GO:0007384 GO:GO:0001709 GO:GO:0007424
GO:GO:0045570 GO:GO:0061327 GO:GO:0001706 GO:GO:0010092
GO:GO:0007482 PDB:1B8I PDBsum:1B8I EMBL:X05723 EMBL:X05724
EMBL:X05725 EMBL:X05727 EMBL:X76210 EMBL:BT010241 EMBL:K01963
EMBL:K01959 EMBL:X05427 PIR:B27867 PIR:D26995 RefSeq:NP_536748.1
RefSeq:NP_536752.1 RefSeq:NP_732171.1 RefSeq:NP_732172.1
RefSeq:NP_732173.1 RefSeq:NP_996219.1 UniGene:Dm.21668
ProteinModelPortal:P83949 SMR:P83949 DIP:DIP-33048N IntAct:P83949
MINT:MINT-86744 STRING:P83949 PaxDb:P83949 PRIDE:P83949
EnsemblMetazoa:FBtr0083347 GeneID:42034 KEGG:dme:Dmel_CG10388
CTD:42034 FlyBase:FBgn0003944 eggNOG:NOG252841 InParanoid:P83949
OMA:WMAIAGK PhylomeDB:P83949 ChiTaRS:Ubx EvolutionaryTrace:P83949
GenomeRNAi:42034 NextBio:826845 Bgee:P83949 GermOnline:CG10388
GO:GO:0035052 GO:GO:0060969 Uniprot:P83949
Length = 389
Score = 302 (111.4 bits), Expect = 7.3e-27, P = 7.3e-27
Identities = 60/77 (77%), Positives = 64/77 (83%)
Query: 221 SASLPSPLYP-WMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
S SL L P W+ + R+RGRQTYTRYQTLELEKEFH N YLTRRRRIE+AHALCLTE
Sbjct: 277 SESLAGSLLPDWLGTNGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTE 336
Query: 280 RQIKIWFQNRRMKWKKE 296
RQIKIWFQNRRMK KKE
Sbjct: 337 RQIKIWFQNRRMKLKKE 353
>UNIPROTKB|P20822 [details] [associations]
symbol:Ubx "Homeotic protein ultrabithorax" species:46245
"Drosophila pseudoobscura pseudoobscura" [GO:0003677 "DNA binding"
evidence=TAS] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0003677 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
EMBL:CM000070 GenomeReviews:CM000070_GR eggNOG:NOG252841
EMBL:X05179 EMBL:U03179 PIR:A29259 RefSeq:XP_001359066.2
GeneID:4802074 KEGG:dpo:Dpse_GA10294 FlyBase:FBgn0243536
InParanoid:P20822 Uniprot:P20822
Length = 385
Score = 302 (111.4 bits), Expect = 7.3e-27, P = 7.3e-27
Identities = 60/77 (77%), Positives = 64/77 (83%)
Query: 221 SASLPSPLYP-WMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
S SL L P W+ + R+RGRQTYTRYQTLELEKEFH N YLTRRRRIE+AHALCLTE
Sbjct: 272 SESLAGSLLPDWLGTNGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTE 331
Query: 280 RQIKIWFQNRRMKWKKE 296
RQIKIWFQNRRMK KKE
Sbjct: 332 RQIKIWFQNRRMKLKKE 348
>UNIPROTKB|P83950 [details] [associations]
symbol:Ubx "Homeotic protein ultrabithorax" species:7240
"Drosophila simulans" [GO:0003677 "DNA binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
EMBL:AF099983 EMBL:AF099980 EMBL:AF099981 EMBL:AF099982
ProteinModelPortal:P83950 SMR:P83950 FlyBase:FBgn0014820
Uniprot:P83950
Length = 389
Score = 302 (111.4 bits), Expect = 7.3e-27, P = 7.3e-27
Identities = 60/77 (77%), Positives = 64/77 (83%)
Query: 221 SASLPSPLYP-WMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
S SL L P W+ + R+RGRQTYTRYQTLELEKEFH N YLTRRRRIE+AHALCLTE
Sbjct: 277 SESLAGSLLPDWLGTNGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTE 336
Query: 280 RQIKIWFQNRRMKWKKE 296
RQIKIWFQNRRMK KKE
Sbjct: 337 RQIKIWFQNRRMKLKKE 353
>UNIPROTKB|Q6VPU7 [details] [associations]
symbol:Ubx "Ultrabithorax" species:7244 "Drosophila
virilis" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 FlyBase:FBgn0013100 EMBL:AY333070 HSSP:P83949
ProteinModelPortal:Q6VPU7 SMR:Q6VPU7 STRING:Q6VPU7
InParanoid:Q6VPU7 Uniprot:Q6VPU7
Length = 387
Score = 302 (111.4 bits), Expect = 7.3e-27, P = 7.3e-27
Identities = 60/77 (77%), Positives = 64/77 (83%)
Query: 221 SASLPSPLYP-WMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
S SL L P W+ + R+RGRQTYTRYQTLELEKEFH N YLTRRRRIE+AHALCLTE
Sbjct: 274 SESLAGSLLPDWLGTNGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTE 333
Query: 280 RQIKIWFQNRRMKWKKE 296
RQIKIWFQNRRMK KKE
Sbjct: 334 RQIKIWFQNRRMKLKKE 350
>ZFIN|ZDB-GENE-980526-533 [details] [associations]
symbol:hoxc5a "homeo box C5a" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-980526-533 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104161 HOVERGEN:HBG016849
HOGENOM:HOG000231178 EMBL:BX005254 EMBL:BC163205 IPI:IPI00499962
UniGene:Dr.132198 Ensembl:ENSDART00000103038 Uniprot:B3DIP7
Length = 233
Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
Identities = 59/82 (71%), Positives = 66/82 (80%)
Query: 228 LYPWMRS-----QFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQI 282
+YPWM + + KR R +YTRYQTLELEKEFHFNRYLTRRRRIEIA+ LCL ERQI
Sbjct: 151 IYPWMTKLHMSHESDGKRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQI 210
Query: 283 KIWFQNRRMKWKKENKSK-DGG 303
KIWFQNRRMKWKK++K K GG
Sbjct: 211 KIWFQNRRMKWKKDSKLKVKGG 232
>UNIPROTKB|J9PB70 [details] [associations]
symbol:HOXC9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR006711 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00700000104054 EMBL:AAEX03014973 EMBL:AAEX03014974
Ensembl:ENSCAFT00000049459 Uniprot:J9PB70
Length = 332
Score = 277 (102.6 bits), Expect = 1.2e-26, Sum P(2) = 1.2e-26
Identities = 56/79 (70%), Positives = 64/79 (81%)
Query: 223 SLPSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQI 282
S PS + W R+ GRQTY+RYQTLELEKEF FN YLTR+RRIE++HAL LTERQ+
Sbjct: 252 SRPSWHFLWAPG---RRSGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQV 308
Query: 283 KIWFQNRRMKWKKENKSKD 301
KIWFQNRRMKWKKEN +KD
Sbjct: 309 KIWFQNRRMKWKKEN-NKD 326
Score = 38 (18.4 bits), Expect = 1.2e-26, Sum P(2) = 1.2e-26
Identities = 14/51 (27%), Positives = 20/51 (39%)
Query: 86 YGAHEGGMEQYPRPDSPSMG-HMGPQNGHQTPVVYASCKLQAAVGNGIIPG 135
+G EG + + S+G GP Q P +C G G +PG
Sbjct: 194 WGRKEGRRARGSKGPGESVGSRTGPPGPTQPP----ACSSHPHPGLGSLPG 240
>RGD|620609 [details] [associations]
symbol:Hoxa5 "homeo box A5" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007389 "pattern specification
process" evidence=TAS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 RGD:620609 GO:GO:0005634
GO:GO:0016477 GO:GO:0009952 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0043065 GO:GO:0048286
GO:GO:0035264 GO:GO:0003016 GO:GO:0016525 GO:GO:0060749
GO:GO:0060644 GO:GO:0048704 GO:GO:0007389 GO:GO:0033599
GO:GO:0060441 GO:GO:0060484 GO:GO:0030878 GO:GO:0010870
GO:GO:0045639 GO:GO:0045647 GO:GO:0060574 HOVERGEN:HBG016849
eggNOG:NOG236516 HOGENOM:HOG000231178 OrthoDB:EOG49S677
GO:GO:0060435 GO:GO:0060764 GO:GO:0060480 GO:GO:0060638
GO:GO:0060535 EMBL:L03556 IPI:IPI00211208 PIR:I65197
UniGene:Rn.8465 ProteinModelPortal:P52949 SMR:P52949 STRING:P52949
PRIDE:P52949 InParanoid:P52949 Genevestigator:P52949
GermOnline:ENSRNOG00000006466 Uniprot:P52949
Length = 233
Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 59/78 (75%), Positives = 62/78 (79%)
Query: 228 LYPWMRSQF---------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWMR E KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+
Sbjct: 155 IYPWMRKLHISHDNIGGPEGKRARTCYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLS 214
Query: 279 ERQIKIWFQNRRMKWKKE 296
ERQIKIWFQNRRMKWKK+
Sbjct: 215 ERQIKIWFQNRRMKWKKD 232
>UNIPROTKB|P52949 [details] [associations]
symbol:Hoxa5 "Homeobox protein Hox-A5" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 RGD:620609 GO:GO:0005634
GO:GO:0016477 GO:GO:0009952 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0043065 GO:GO:0048286
GO:GO:0035264 GO:GO:0003016 GO:GO:0016525 GO:GO:0060749
GO:GO:0060644 GO:GO:0048704 GO:GO:0007389 GO:GO:0033599
GO:GO:0060441 GO:GO:0060484 GO:GO:0030878 GO:GO:0010870
GO:GO:0045639 GO:GO:0045647 GO:GO:0060574 HOVERGEN:HBG016849
eggNOG:NOG236516 HOGENOM:HOG000231178 OrthoDB:EOG49S677
GO:GO:0060435 GO:GO:0060764 GO:GO:0060480 GO:GO:0060638
GO:GO:0060535 EMBL:L03556 IPI:IPI00211208 PIR:I65197
UniGene:Rn.8465 ProteinModelPortal:P52949 SMR:P52949 STRING:P52949
PRIDE:P52949 InParanoid:P52949 Genevestigator:P52949
GermOnline:ENSRNOG00000006466 Uniprot:P52949
Length = 233
Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 59/78 (75%), Positives = 62/78 (79%)
Query: 228 LYPWMRSQF---------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWMR E KR R YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL+
Sbjct: 155 IYPWMRKLHISHDNIGGPEGKRARTCYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLS 214
Query: 279 ERQIKIWFQNRRMKWKKE 296
ERQIKIWFQNRRMKWKK+
Sbjct: 215 ERQIKIWFQNRRMKWKKD 232
>ZFIN|ZDB-GENE-000822-1 [details] [associations]
symbol:hoxc6b "homeo box C6b" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-000822-1 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 EMBL:CABZ01085067 IPI:IPI00484929
Ensembl:ENSDART00000067698 OMA:EIANTLC ArrayExpress:F1RAL1
Bgee:F1RAL1 Uniprot:F1RAL1
Length = 228
Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 62/96 (64%), Positives = 71/96 (73%)
Query: 228 LYPWMRSQ---------FERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 278
+YPWM+ +R+RGRQ Y+RYQTLELEKEFH+NRYLTRRRRIEIA+ LCL+
Sbjct: 117 IYPWMQRMNSHSGVGYGSDRRRGRQIYSRYQTLELEKEFHYNRYLTRRRRIEIANTLCLS 176
Query: 279 ERQIKIWFQNRRMKWKKENKS----KDGGS-DAGSD 309
ERQIKIWFQNRRMKWKKE+ D GS AG D
Sbjct: 177 ERQIKIWFQNRRMKWKKESNLTSILNDNGSVGAGQD 212
>UNIPROTKB|B0W1V2 [details] [associations]
symbol:abd-A "Homeobox protein abdominal-A homolog"
species:7176 "Culex quinquefasciatus" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0009952 "anterior/posterior
pattern specification" evidence=ISS] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 eggNOG:NOG328968
OrthoDB:EOG4F7M1W Gene3D:1.10.10.60 InterPro:IPR022132
InterPro:IPR020479 Pfam:PF12407 PRINTS:PR00024 SUPFAM:SSF46689
EMBL:DS231824 RefSeq:XP_001842686.1 ProteinModelPortal:B0W1V2
SMR:B0W1V2 EnsemblMetazoa:CPIJ001016-RA GeneID:6032019
KEGG:cqu:CpipJ_CPIJ001016 VectorBase:CPIJ001016 OMA:CHGIASP
PhylomeDB:B0W1V2 Uniprot:B0W1V2
Length = 216
Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
Identities = 55/59 (93%), Positives = 57/59 (96%)
Query: 238 RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
R+RGRQTYTR+QTLELEKEFHFN YLTRRRRIEIAHALCLTERQIKIWFQNRRMK KKE
Sbjct: 43 RRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKE 101
>UNIPROTKB|O76762 [details] [associations]
symbol:abd-A "Homeobox protein abdominal-A homolog"
species:7165 "Anopheles gambiae" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0009952 "anterior/posterior pattern specification"
evidence=ISS] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 eggNOG:NOG328968 OrthoDB:EOG4F7M1W
Gene3D:1.10.10.60 InterPro:IPR022132 InterPro:IPR020479
Pfam:PF12407 PRINTS:PR00024 SUPFAM:SSF46689 EMBL:AF080566
EMBL:AAAB01008850 RefSeq:XP_311627.4 HSSP:P02833
ProteinModelPortal:O76762 SMR:O76762 EnsemblMetazoa:AGAP004662-RA
GeneID:1272718 KEGG:aga:AgaP_AGAP004662 VectorBase:AGAP004662
CTD:1272718 HOGENOM:HOG000231181 InParanoid:O76762 Uniprot:O76762
Length = 308
Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
Identities = 55/59 (93%), Positives = 57/59 (96%)
Query: 238 RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
R+RGRQTYTR+QTLELEKEFHFN YLTRRRRIEIAHALCLTERQIKIWFQNRRMK KKE
Sbjct: 138 RRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKE 196
>UNIPROTKB|P29552 [details] [associations]
symbol:abd-A "Homeobox protein abdominal-A homolog"
species:7159 "Aedes aegypti" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0009952 "anterior/posterior pattern specification"
evidence=ISS] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 EMBL:CH477608 EMBL:X67132
RefSeq:XP_001660313.1 ProteinModelPortal:P29552 SMR:P29552
EnsemblMetazoa:AAEL009742-RA GeneID:5572355
KEGG:aag:AaeL_AAEL009742 VectorBase:AAEL009742 eggNOG:NOG328968
InParanoid:P29552 OrthoDB:EOG4F7M1W PhylomeDB:P29552
Gene3D:1.10.10.60 InterPro:IPR022132 InterPro:IPR020479
Pfam:PF12407 PRINTS:PR00024 SUPFAM:SSF46689 Uniprot:P29552
Length = 239
Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
Identities = 55/59 (93%), Positives = 57/59 (96%)
Query: 238 RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
R+RGRQTYTR+QTLELEKEFHFN YLTRRRRIEIAHALCLTERQIKIWFQNRRMK KKE
Sbjct: 21 RRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKE 79
>ZFIN|ZDB-GENE-990415-104 [details] [associations]
symbol:hoxb3a "homeo box B3a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-990415-104
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104189 eggNOG:NOG284589
HOGENOM:HOG000252944 HOVERGEN:HBG107984 KO:K09303
InterPro:IPR025281 Pfam:PF13293 EMBL:AJ537509 EMBL:AL645782
EMBL:BC095559 EMBL:Y13944 EMBL:BK005081 EMBL:BK005082
IPI:IPI00486662 RefSeq:NP_571192.2 UniGene:Dr.132502
ProteinModelPortal:O42368 SMR:O42368 STRING:O42368
Ensembl:ENSDART00000078466 GeneID:30339 KEGG:dre:30339 CTD:30339
InParanoid:O42368 OMA:ATYYDNT OrthoDB:EOG4S4PH1 NextBio:20806770
ArrayExpress:O42368 Bgee:O42368 Uniprot:O42368
Length = 417
Score = 248 (92.4 bits), Expect = 1.0e-25, Sum P(3) = 1.0e-25
Identities = 50/78 (64%), Positives = 59/78 (75%)
Query: 239 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
KR R YT Q +ELEKEFHFNRYL R RR+E+A+ L L+ERQIKIWFQNRRMK+KK+ K
Sbjct: 181 KRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQK 240
Query: 299 SKDGGSDAGSDITPATSP 316
SK GS +G +P SP
Sbjct: 241 SKGIGSSSGGP-SPTGSP 257
Score = 39 (18.8 bits), Expect = 1.0e-25, Sum P(3) = 1.0e-25
Identities = 5/25 (20%), Positives = 14/25 (56%)
Query: 220 TSASLPSPLYPWMRSQFERKRGRQT 244
T+ +L ++PWM+ + + + +
Sbjct: 132 TNPTLTKQIFPWMKESRQNTKQKNS 156
Score = 39 (18.8 bits), Expect = 1.0e-25, Sum P(3) = 1.0e-25
Identities = 9/26 (34%), Positives = 11/26 (42%)
Query: 15 NGGVLPPEHHQQHHYGATVLPQNNGV 40
NG + P +HH V P N V
Sbjct: 70 NGSCMRPSLPPEHHPPPQVSPPQNTV 95
>UNIPROTKB|P14840 [details] [associations]
symbol:HOXB4 "Homeobox protein Hox-B4" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 KO:K09304 HOGENOM:HOG000231179 HOVERGEN:HBG016849
OrthoDB:EOG4GTKF7 CTD:3214 EMBL:X17612 IPI:IPI00572832 PIR:S10092
RefSeq:NP_990624.1 UniGene:Gga.39784 ProteinModelPortal:P14840
SMR:P14840 STRING:P14840 GeneID:396230 KEGG:gga:396230
eggNOG:NOG297644 InParanoid:P14840 NextBio:20816282 Uniprot:P14840
Length = 245
Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 64/115 (55%), Positives = 75/115 (65%)
Query: 220 TSASLPSPL-YPWMR-----------SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRR 267
+++S P+ YPWM+ S E KR R YTR Q LELEKEFH+NRYLTRRR
Sbjct: 120 SNSSCKEPVVYPWMKKVHVSTVNPNYSGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRR 179
Query: 268 RIEIAHALCLTERQIKIWFQNRRMKWKKENK-------SKDGGSDAGSDITPATS 315
R+EIAH+LCL+ERQIKIWFQNRRMKWKK++K S S A I PA S
Sbjct: 180 RVEIAHSLCLSERQIKIWFQNRRMKWKKDHKLPNTKIRSNPSSSSASLQIPPAAS 234
>UNIPROTKB|F1N257 [details] [associations]
symbol:HOXB4 "Homeobox protein Hox-B4" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:2000738 "positive
regulation of stem cell differentiation" evidence=IEA] [GO:0060218
"hematopoietic stem cell differentiation" evidence=IEA] [GO:0060216
"definitive hemopoiesis" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0048539 "bone
marrow development" evidence=IEA] [GO:0048536 "spleen development"
evidence=IEA] [GO:0048103 "somatic stem cell division"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0002011
"morphogenesis of an epithelial sheet" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0008283 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0000122 GO:GO:0048536
GO:GO:0048704 GO:GO:0048103 GO:GO:0060216 GO:GO:0002011
IPI:IPI00713167 OMA:RYAACRD GO:GO:0048539 EMBL:DAAA02049065
Ensembl:ENSBTAT00000043402 Uniprot:F1N257
Length = 251
Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 64/111 (57%), Positives = 71/111 (63%)
Query: 221 SASLPSPLYPWMRSQF-----------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRI 269
SA +YPWMR E KR R YTR Q LELEKEFH+NRYLTRRRR+
Sbjct: 134 SACKEPVVYPWMRKVHVSTVNPNYAGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRV 193
Query: 270 EIAHALCLTERQIKIWFQNRRMKWKKENKSKD----GGSDAGSDITPATSP 316
EIAHALCL+ERQIKIWFQNRRMKWKK++K + G AGS P P
Sbjct: 194 EIAHALCLSERQIKIWFQNRRMKWKKDHKLPNTKIRSGGTAGSAGGPPGRP 244
>UNIPROTKB|E1BRT6 [details] [associations]
symbol:HOXD8 "Homeobox protein Hox-D8" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00700000104054 EMBL:AADN02020025
EMBL:AADN02020026 EMBL:AADN02020027 EMBL:AADN02020028
EMBL:AADN02020029 EMBL:AADN02020030 IPI:IPI00820869
Ensembl:ENSGALT00000038688 ArrayExpress:E1BRT6 Uniprot:E1BRT6
Length = 329
Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
Identities = 54/77 (70%), Positives = 67/77 (87%)
Query: 225 PSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKI 284
P+P++ + + R+RGRQTY+R+QTLELEKEF FN YLTR+RRIE++HAL LTERQ+KI
Sbjct: 253 PTPVFLFRTAAPGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKI 312
Query: 285 WFQNRRMKWKKENKSKD 301
WFQNRRMKWKKEN +KD
Sbjct: 313 WFQNRRMKWKKEN-NKD 328
>UNIPROTKB|E1C676 [details] [associations]
symbol:HOXD8 "Homeobox protein Hox-D8" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR006711
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00700000104054 InterPro:IPR017112 PIRSF:PIRSF037109
EMBL:AADN02020025 EMBL:AADN02020026 EMBL:AADN02020027
EMBL:AADN02020028 EMBL:AADN02020029 EMBL:AADN02020030
IPI:IPI00581324 Ensembl:ENSGALT00000029909 OMA:PERTECA
ArrayExpress:E1C676 Uniprot:E1C676
Length = 307
Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
Identities = 54/77 (70%), Positives = 67/77 (87%)
Query: 225 PSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKI 284
P+P++ + + R+RGRQTY+R+QTLELEKEF FN YLTR+RRIE++HAL LTERQ+KI
Sbjct: 229 PTPVFLFRTAAPGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKI 288
Query: 285 WFQNRRMKWKKENKSKD 301
WFQNRRMKWKKEN +KD
Sbjct: 289 WFQNRRMKWKKEN-NKD 304
>UNIPROTKB|E2QT52 [details] [associations]
symbol:HOXB4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 Ensembl:ENSCAFT00000026671 Uniprot:E2QT52
Length = 274
Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
Identities = 61/107 (57%), Positives = 69/107 (64%)
Query: 221 SASLPSPLYPWMRSQF-----------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRI 269
SA +YPWMR E KR R YTR Q LELEKEFH+NRYLTRRRR+
Sbjct: 141 SACKEPVVYPWMRKVHVSTVNPNYAGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRV 200
Query: 270 EIAHALCLTERQIKIWFQNRRMKWKKENKSKDGGSDAGSDITPATSP 316
EIAHALCL+ERQIKIWFQNRRMKWKK++K + +G A P
Sbjct: 201 EIAHALCLSERQIKIWFQNRRMKWKKDHKLPNTKIRSGGTAGTAGGP 247
>UNIPROTKB|F6UWC1 [details] [associations]
symbol:HOXB4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
OMA:RYAACRD EMBL:AAEX03006516 Ensembl:ENSCAFT00000026671
EMBL:AAEX03006515 Uniprot:F6UWC1
Length = 251
Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
Identities = 61/107 (57%), Positives = 69/107 (64%)
Query: 221 SASLPSPLYPWMRSQF-----------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRI 269
SA +YPWMR E KR R YTR Q LELEKEFH+NRYLTRRRR+
Sbjct: 134 SACKEPVVYPWMRKVHVSTVNPNYAGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRV 193
Query: 270 EIAHALCLTERQIKIWFQNRRMKWKKENKSKDGGSDAGSDITPATSP 316
EIAHALCL+ERQIKIWFQNRRMKWKK++K + +G A P
Sbjct: 194 EIAHALCLSERQIKIWFQNRRMKWKKDHKLPNTKIRSGGTAGTAGGP 240
>UNIPROTKB|H9L184 [details] [associations]
symbol:Gga.48067 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0002011
"morphogenesis of an epithelial sheet" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048103 "somatic stem cell division"
evidence=IEA] [GO:0048536 "spleen development" evidence=IEA]
[GO:0048539 "bone marrow development" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA] [GO:0060216
"definitive hemopoiesis" evidence=IEA] [GO:0060218 "hematopoietic
stem cell differentiation" evidence=IEA] [GO:2000738 "positive
regulation of stem cell differentiation" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 EMBL:AADN02014570
Ensembl:ENSGALT00000029853 OMA:MANTIPP Uniprot:H9L184
Length = 102
Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
Identities = 57/86 (66%), Positives = 63/86 (73%)
Query: 237 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
E KR R YTR Q LELEKEFH+NRYLTRRRR+EIAH+LCL+ERQIKIWFQNRRMKWKK+
Sbjct: 9 EPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHSLCLSERQIKIWFQNRRMKWKKD 68
Query: 297 NK-------SKDGGSDAGSDITPATS 315
+K S S A I PA S
Sbjct: 69 HKLPNTKIRSNPSSSSASLQIPPAAS 94
>ZFIN|ZDB-GENE-990415-105 [details] [associations]
symbol:hoxb4a "homeo box B4a" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-990415-105 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
eggNOG:NOG314883 KO:K09304 HOGENOM:HOG000231179 HOVERGEN:HBG016849
OrthoDB:EOG4GTKF7 EMBL:AL645782 EMBL:AF071252 EMBL:M24085
EMBL:Y13946 IPI:IPI00499387 PIR:JT0489 RefSeq:NP_571193.1
UniGene:Dr.133609 ProteinModelPortal:P22574 SMR:P22574
Ensembl:ENSDART00000012470 GeneID:30340 KEGG:dre:30340 CTD:30340
InParanoid:P22574 OMA:RSACNEQ NextBio:20806771 ArrayExpress:P22574
Bgee:P22574 Uniprot:P22574
Length = 246
Score = 283 (104.7 bits), Expect = 7.6e-25, P = 7.6e-25
Identities = 58/91 (63%), Positives = 66/91 (72%)
Query: 220 TSASLPSPL-YPWMR-----------SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRR 267
T +S P+ YPWM+ S E KR R YTR Q LELEKEFH+NRYLTRRR
Sbjct: 121 TVSSRKDPVVYPWMKKVHVNIVSPNYSGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRR 180
Query: 268 RIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
R+EIAH LCL+ERQIKIWFQNRRMKWKK++K
Sbjct: 181 RVEIAHTLCLSERQIKIWFQNRRMKWKKDHK 211
>MGI|MGI:96195 [details] [associations]
symbol:Hoxc4 "homeobox C4" species:10090 "Mus musculus"
[GO:0001501 "skeletal system development" evidence=IMP] [GO:0003677
"DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0048562 "embryonic organ morphogenesis"
evidence=IMP] [GO:0051216 "cartilage development" evidence=IMP]
[GO:0071837 "HMG box domain binding" evidence=IPI]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
MGI:MGI:96195 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
GO:GO:0051216 eggNOG:NOG314883 KO:K09304 GO:GO:0048562
HOGENOM:HOG000231179 HOVERGEN:HBG016849 OrthoDB:EOG4GTKF7
OMA:ERQYNCA CTD:3221 EMBL:D11328 EMBL:S62287 EMBL:X69019
EMBL:M81660 IPI:IPI00122942 PIR:S35219 RefSeq:NP_038581.2
UniGene:Mm.1351 ProteinModelPortal:Q08624 SMR:Q08624 STRING:Q08624
PhosphoSite:Q08624 PRIDE:Q08624 Ensembl:ENSMUST00000100164
GeneID:15423 KEGG:mmu:15423 UCSC:uc007xxg.1 InParanoid:Q08624
NextBio:288166 Bgee:Q08624 CleanEx:MM_HOXC4 Genevestigator:Q08624
GermOnline:ENSMUSG00000075394 Uniprot:Q08624
Length = 264
Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
Identities = 57/91 (62%), Positives = 67/91 (73%)
Query: 220 TSASLPSPL-YPWMRSQF-----------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRR 267
+SA+ P+ YPWM+ E KR R YTR Q LELEKEFH+NRYLTRRR
Sbjct: 126 SSAASKQPIVYPWMKKIHVSTVNPNYNGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRR 185
Query: 268 RIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
RIEIAH+LCL+ERQIKIWFQNRRMKWKK+++
Sbjct: 186 RIEIAHSLCLSERQIKIWFQNRRMKWKKDHR 216
>UNIPROTKB|H0YHX3 [details] [associations]
symbol:HOXA4 "Homeobox protein Hox-A4" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
EMBL:AC004080 HGNC:HGNC:5105 Ensembl:ENST00000511914 Uniprot:H0YHX3
Length = 140
Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 51/62 (82%), Positives = 55/62 (88%)
Query: 237 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
E KR R YTR Q LELEKEFHFNRYLTRRRRIEIAH LCL+ERQ+KIWFQNRRMKWKK+
Sbjct: 34 EPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKD 93
Query: 297 NK 298
+K
Sbjct: 94 HK 95
>UNIPROTKB|F1NH10 [details] [associations]
symbol:HOXB3 "Homeobox protein Hox-B3" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000979 "RNA polymerase
II core promoter sequence-specific DNA binding" evidence=IEA]
[GO:0001525 "angiogenesis" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0021546 "rhombomere development" evidence=IEA] [GO:0021615
"glossopharyngeal nerve morphogenesis" evidence=IEA] [GO:0030878
"thyroid gland development" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0050767
"regulation of neurogenesis" evidence=IEA] [GO:0051216 "cartilage
development" evidence=IEA] [GO:0060216 "definitive hemopoiesis"
evidence=IEA] [GO:0060324 "face development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0000979
GeneTree:ENSGT00700000104189 InterPro:IPR025281 Pfam:PF13293
OMA:ATYYDNT IPI:IPI00594134 EMBL:AADN02027051
Ensembl:ENSGALT00000021935 Uniprot:F1NH10
Length = 377
Score = 249 (92.7 bits), Expect = 1.6e-24, Sum P(2) = 1.6e-24
Identities = 50/78 (64%), Positives = 59/78 (75%)
Query: 239 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
KR R YT Q +ELEKEFHFNRYL R RR+E+A+ L L+ERQIKIWFQNRRMK+KK+ K
Sbjct: 159 KRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQK 218
Query: 299 SKDGGSDAGSDITPATSP 316
SK GS +G +P SP
Sbjct: 219 SKGMGSSSGGP-SPTGSP 235
Score = 47 (21.6 bits), Expect = 1.6e-24, Sum P(2) = 1.6e-24
Identities = 10/24 (41%), Positives = 12/24 (50%)
Query: 15 NGGVLPPEHHQQHHYGATVLPQNN 38
NG + P Q+HH TV P N
Sbjct: 66 NGSCMRPSLPQEHHPPPTVSPPPN 89
>ZFIN|ZDB-GENE-990415-112 [details] [associations]
symbol:hoxc4a "homeo box C4a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-990415-112 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
eggNOG:NOG314883 KO:K09304 HOGENOM:HOG000231179 HOVERGEN:HBG016849
OrthoDB:EOG4GTKF7 EMBL:BX005254 EMBL:AF071264 EMBL:BC092923
EMBL:DQ060552 EMBL:Y14545 IPI:IPI00489611 RefSeq:NP_571197.1
UniGene:Dr.159439 ProteinModelPortal:Q9PWM3 SMR:Q9PWM3
Ensembl:ENSDART00000103132 GeneID:30345 KEGG:dre:30345 CTD:30345
InParanoid:A2BE61 OMA:ERQYNCA NextBio:20806775 Bgee:Q9PWM3
Uniprot:Q9PWM3
Length = 268
Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 58/91 (63%), Positives = 68/91 (74%)
Query: 220 TSASLPSPL-YPWMR--------SQF---ERKRGRQTYTRYQTLELEKEFHFNRYLTRRR 267
+SAS P+ YPWM+ S + E KR R YTR Q LELEKEFH+NRYLTRRR
Sbjct: 124 SSASAKQPVVYPWMKKIHVSTVNSSYNGAEPKRSRTAYTRQQVLELEKEFHYNRYLTRRR 183
Query: 268 RIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
RIEIAH+L L+ERQIKIWFQNRRMKWKK+++
Sbjct: 184 RIEIAHSLVLSERQIKIWFQNRRMKWKKDHR 214
Score = 264 (98.0 bits), Expect = 7.8e-23, P = 7.8e-23
Identities = 54/85 (63%), Positives = 63/85 (74%)
Query: 237 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
E KR R YTR Q LELEKEFH+NRYLTRRRRIEIAH+L L+ERQIKIWFQNRRMKWKK+
Sbjct: 153 EPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLVLSERQIKIWFQNRRMKWKKD 212
Query: 297 NK--------SKDGGSDAGSDITPA 313
++ S G +GS+ + A
Sbjct: 213 HRLPNTKVRSSSSTGISSGSNTSSA 237
>UNIPROTKB|P23682 [details] [associations]
symbol:HOXB3 "Homeobox protein Hox-B3" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 eggNOG:NOG284589
HOGENOM:HOG000252944 HOVERGEN:HBG107984 KO:K09303
InterPro:IPR025281 Pfam:PF13293 OrthoDB:EOG4S4PH1 EMBL:X74506
EMBL:X52749 IPI:IPI00594134 PIR:S10885 PIR:S71480
RefSeq:NP_990074.1 UniGene:Gga.2648 ProteinModelPortal:P23682
SMR:P23682 STRING:P23682 GeneID:395502 KEGG:gga:395502 CTD:3213
InParanoid:P23682 NextBio:20815581 Uniprot:P23682
Length = 399
Score = 249 (92.7 bits), Expect = 3.8e-24, Sum P(2) = 3.8e-24
Identities = 50/78 (64%), Positives = 59/78 (75%)
Query: 239 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
KR R YT Q +ELEKEFHFNRYL R RR+E+A+ L L+ERQIKIWFQNRRMK+KK+ K
Sbjct: 160 KRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQK 219
Query: 299 SKDGGSDAGSDITPATSP 316
SK GS +G +P SP
Sbjct: 220 SKGMGSSSGGP-SPTGSP 236
Score = 47 (21.6 bits), Expect = 3.8e-24, Sum P(2) = 3.8e-24
Identities = 10/24 (41%), Positives = 12/24 (50%)
Query: 15 NGGVLPPEHHQQHHYGATVLPQNN 38
NG + P Q+HH TV P N
Sbjct: 66 NGSCMRPSLPQEHHPPPTVSPPPN 89
>RGD|1586211 [details] [associations]
symbol:Hoxb8 "homeo box B8" species:10116 "Rattus norvegicus"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007625 "grooming behavior" evidence=ISO]
[GO:0008344 "adult locomotory behavior" evidence=ISO] [GO:0009952
"anterior/posterior pattern specification" evidence=ISO]
[GO:0019233 "sensory perception of pain" evidence=ISO] [GO:0021516
"dorsal spinal cord development" evidence=ISO] [GO:0045638
"negative regulation of myeloid cell differentiation"
evidence=ISO;ISS] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=ISO] [GO:0048705 "skeletal system
morphogenesis" evidence=ISO] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
RGD:1586211 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GO:GO:0045638 eggNOG:NOG314669 EMBL:M37565
IPI:IPI00476117 PIR:A43559 UniGene:Rn.231433
ProteinModelPortal:P18863 SMR:P18863 STRING:P18863 UCSC:RGD:1586211
Genevestigator:P18863 Uniprot:P18863
Length = 92
Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 52/63 (82%), Positives = 59/63 (93%)
Query: 239 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
+RGRQTY+RYQTLELEKEF FN YLTR+RRIE++HAL LTERQ+KIWFQNRRMKWKKEN
Sbjct: 12 QRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKEN- 70
Query: 299 SKD 301
+KD
Sbjct: 71 NKD 73
>RGD|1595784 [details] [associations]
symbol:Hoxc9 "homeobox C9" species:10116 "Rattus norvegicus"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IEA;ISO] [GO:0048706 "embryonic skeletal
system development" evidence=ISO] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 RGD:1595784 GO:GO:0007275
GO:GO:0005634 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
eggNOG:NOG314669 EMBL:S76301 EMBL:M37568 IPI:IPI01016344 PIR:D43559
UniGene:Rn.91646 ProteinModelPortal:P18866 SMR:P18866 STRING:P18866
UCSC:RGD:1595784 HOVERGEN:HBG107057 Genevestigator:P18866
Uniprot:P18866
Length = 108
Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 52/64 (81%), Positives = 59/64 (92%)
Query: 238 RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 297
R+ GRQTY+RYQTLELEKEF FN YLTR+RRIE++HAL LTERQ+KIWFQNRRMKWKKEN
Sbjct: 15 RRSGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKEN 74
Query: 298 KSKD 301
+KD
Sbjct: 75 -NKD 77
>UNIPROTKB|P18866 [details] [associations]
symbol:Hoxc8 "Homeobox protein Hox-C8" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
RGD:1595784 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 eggNOG:NOG314669 EMBL:S76301 EMBL:M37568
IPI:IPI01016344 PIR:D43559 UniGene:Rn.91646
ProteinModelPortal:P18866 SMR:P18866 STRING:P18866 UCSC:RGD:1595784
HOVERGEN:HBG107057 Genevestigator:P18866 Uniprot:P18866
Length = 108
Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 52/64 (81%), Positives = 59/64 (92%)
Query: 238 RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 297
R+ GRQTY+RYQTLELEKEF FN YLTR+RRIE++HAL LTERQ+KIWFQNRRMKWKKEN
Sbjct: 15 RRSGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKEN 74
Query: 298 KSKD 301
+KD
Sbjct: 75 -NKD 77
>UNIPROTKB|F6V4P2 [details] [associations]
symbol:HOXC9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR006711 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00700000104054 InterPro:IPR017112 PIRSF:PIRSF037109
OMA:NNPVANW EMBL:AAEX03014973 EMBL:AAEX03014974
Ensembl:ENSCAFT00000010684 Uniprot:F6V4P2
Length = 253
Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
Identities = 50/60 (83%), Positives = 56/60 (93%)
Query: 238 RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 297
R+ GRQTY+RYQTLELEKEF FN YLTR+RRIE++HAL LTERQ+KIWFQNRRMKWKKEN
Sbjct: 192 RRSGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKEN 251
>WB|WBGene00003102 [details] [associations]
symbol:mab-5 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0042659 "regulation of cell fate specification" evidence=IMP]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IGI;IMP] [GO:0051179 "localization" evidence=IMP]
[GO:0050679 "positive regulation of epithelial cell proliferation"
evidence=IMP] [GO:0045138 "tail tip morphogenesis"
evidence=IGI;IMP] [GO:0030334 "regulation of cell migration"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231181 KO:K09311 GO:GO:0000122
GO:GO:0030334 GO:GO:0045138 eggNOG:NOG238660 GO:GO:0050679
GO:GO:0042659 GO:GO:0051179 EMBL:FO080429
GeneTree:ENSGT00700000104189 EMBL:M22751 EMBL:AF277990 PIR:S44615
RefSeq:NP_498695.1 UniGene:Cel.18387 ProteinModelPortal:P10038
SMR:P10038 IntAct:P10038 MINT:MINT-1123728 STRING:P10038
EnsemblMetazoa:C08C3.3 GeneID:176091 KEGG:cel:CELE_C08C3.3
UCSC:C08C3.3 CTD:176091 WormBase:C08C3.3 InParanoid:P10038
OMA:TSANFGE NextBio:891072 Uniprot:P10038
Length = 200
Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 56/97 (57%), Positives = 71/97 (73%)
Query: 220 TSASLPS---PLYPWMR----SQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIA 272
T S+P+ P++PWM+ E KR RQTY+R QTLELEKEFH+++YLTR+RR EI+
Sbjct: 92 TRTSMPAISQPVFPWMKMGGAKGGESKRTRQTYSRSQTLELEKEFHYHKYLTRKRRQEIS 151
Query: 273 HALCLTERQIKIWFQNRRMKWKKENKSKDGGSDAGSD 309
L LTERQ+KIWFQNRRMK KKE K +GGS+ +
Sbjct: 152 ETLHLTERQVKIWFQNRRMKHKKEAKG-EGGSNESDE 187
>UNIPROTKB|B7ZAD0 [details] [associations]
symbol:HOXB3 "cDNA, FLJ79144, highly similar to Homeobox
protein Hox-B3" species:9606 "Homo sapiens" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0000979 "RNA
polymerase II core promoter sequence-specific DNA binding"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0021546 "rhombomere development"
evidence=IEA] [GO:0021615 "glossopharyngeal nerve morphogenesis"
evidence=IEA] [GO:0030878 "thyroid gland development" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
[GO:0050767 "regulation of neurogenesis" evidence=IEA] [GO:0051216
"cartilage development" evidence=IEA] [GO:0060216 "definitive
hemopoiesis" evidence=IEA] [GO:0060324 "face development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0051216 GO:GO:0060324
GO:GO:0048704 GO:GO:0000979 GO:GO:0060216 GO:GO:0050767
GO:GO:0030878 HOVERGEN:HBG107984 InterPro:IPR025281 Pfam:PF13293
GO:GO:0021615 EMBL:AC103702 UniGene:Hs.654560 HGNC:HGNC:5114
ChiTaRS:HOXB3 GO:GO:0021546 EMBL:AK316245 IPI:IPI00947155
SMR:B7ZAD0 STRING:B7ZAD0 Ensembl:ENST00000472863
Ensembl:ENST00000489475 Uniprot:B7ZAD0
Length = 358
Score = 243 (90.6 bits), Expect = 2.6e-23, Sum P(2) = 2.6e-23
Identities = 49/78 (62%), Positives = 59/78 (75%)
Query: 239 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
KR R YT Q +ELEKEFHFNRYL R RR+E+A+ L L+ERQIKIWFQNRRMK+KK+ K
Sbjct: 116 KRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQK 175
Query: 299 SKDGGSDAGSDITPATSP 316
+K S +G +PA SP
Sbjct: 176 AKGLASSSGGP-SPAGSP 192
Score = 40 (19.1 bits), Expect = 2.6e-23, Sum P(2) = 2.6e-23
Identities = 5/14 (35%), Positives = 11/14 (78%)
Query: 220 TSASLPSPLYPWMR 233
T+++L ++PWM+
Sbjct: 48 TNSTLTKQIFPWMK 61
>FB|FBgn0001077 [details] [associations]
symbol:ftz "fushi tarazu" species:7227 "Drosophila
melanogaster" [GO:0007506 "gonadal mesoderm development"
evidence=IMP] [GO:0008354 "germ cell migration" evidence=IMP]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS;IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=IEA;IC;NAS] [GO:0001077 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding transcription factor
activity involved in positive regulation of transcription"
evidence=IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0000980 "RNA
polymerase II distal enhancer sequence-specific DNA binding"
evidence=IDA] [GO:0007366 "periodic partitioning by pair rule gene"
evidence=NAS;TAS] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=NAS] [GO:0007350 "blastoderm segmentation" evidence=TAS]
[GO:0001708 "cell fate specification" evidence=TAS] [GO:0007417
"central nervous system development" evidence=TAS] [GO:0035289
"posterior head segmentation" evidence=TAS] [GO:0035290 "trunk
segmentation" evidence=TAS] [GO:0035282 "segmentation"
evidence=IMP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 EMBL:AE014297 GO:GO:0005634 GO:GO:0001708
GO:GO:0007417 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 KO:K09311
GO:GO:0003705 GO:GO:0007506 GO:GO:0000980 GO:GO:0001077
GO:GO:0000122 GO:GO:0007366 EMBL:AE001572 GO:GO:0035289
GO:GO:0008354 GO:GO:0035290 PDB:2XHS PDBsum:2XHS EMBL:X00854
EMBL:BT022173 EMBL:X78905 EMBL:K01947 PIR:A93334 RefSeq:NP_477498.1
UniGene:Dm.24032 PDB:1FTZ PDBsum:1FTZ ProteinModelPortal:P02835
SMR:P02835 DIP:DIP-18500N IntAct:P02835 MINT:MINT-156974
STRING:P02835 EnsemblMetazoa:FBtr0081625 GeneID:40834
KEGG:dme:Dmel_CG2047 CTD:40834 FlyBase:FBgn0001077 eggNOG:NOG249057
InParanoid:P02835 OMA:NRYITRR OrthoDB:EOG44TMQT PhylomeDB:P02835
EvolutionaryTrace:P02835 GenomeRNAi:40834 NextBio:820846
Bgee:P02835 GermOnline:CG2047 InterPro:IPR005567 Pfam:PF03867
Uniprot:P02835
Length = 410
Score = 269 (99.8 bits), Expect = 3.1e-23, P = 3.1e-23
Identities = 53/80 (66%), Positives = 60/80 (75%)
Query: 237 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
+ KR RQTYTRYQTLELEKEFHFNRY+TRRRRI+IA+AL L+ERQIKIWFQNRRMK KK+
Sbjct: 253 DSKRTRQTYTRYQTLELEKEFHFNRYITRRRRIDIANALSLSERQIKIWFQNRRMKSKKD 312
Query: 297 NKSKDGGSDAGSDITPATSP 316
G+ T P
Sbjct: 313 RTLDSSPEHCGAGYTAMLPP 332
>FB|FBgn0000439 [details] [associations]
symbol:Dfd "Deformed" species:7227 "Drosophila melanogaster"
[GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0007420 "brain
development" evidence=IMP] [GO:0009790 "embryo development"
evidence=IMP] [GO:0033613 "activating transcription factor binding"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=NAS;TAS] [GO:0007380 "specification of segmental identity,
head" evidence=NAS] [GO:0060322 "head development" evidence=IMP]
[GO:0006917 "induction of apoptosis" evidence=IGI;IMP] [GO:0048598
"embryonic morphogenesis" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0000977 "RNA
polymerase II regulatory region sequence-specific DNA binding"
evidence=IDA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 EMBL:AE014297
GO:GO:0005634 GO:GO:0007420 GO:GO:0006917 GO:GO:0048598
GO:GO:0045944 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 GO:GO:0003705
GO:GO:0000122 EMBL:AE001572 GO:GO:0000977 GO:GO:0060322 EMBL:X05136
EMBL:M13373 PIR:A26638 RefSeq:NP_477201.1 UniGene:Dm.5282
ProteinModelPortal:P07548 SMR:P07548 DIP:DIP-18055N IntAct:P07548
MINT:MINT-858733 STRING:P07548 EnsemblMetazoa:FBtr0081621
GeneID:40832 KEGG:dme:Dmel_CG2189 UCSC:CG2189-RA CTD:40832
FlyBase:FBgn0000439 eggNOG:NOG314883 HOGENOM:HOG000290519
InParanoid:P07548 KO:K09304 OMA:DLMAETT OrthoDB:EOG49CNQM
PhylomeDB:P07548 GenomeRNAi:40832 NextBio:820832 Bgee:P07548
GermOnline:CG2189 Uniprot:P07548
Length = 586
Score = 273 (101.2 bits), Expect = 5.6e-23, P = 5.6e-23
Identities = 51/62 (82%), Positives = 55/62 (88%)
Query: 237 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
E KR R YTR+Q LELEKEFH+NRYLTRRRRIEIAH L L+ERQIKIWFQNRRMKWKK+
Sbjct: 365 EPKRQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKKD 424
Query: 297 NK 298
NK
Sbjct: 425 NK 426
>UNIPROTKB|E1BAG4 [details] [associations]
symbol:HOXD9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0035137 "hindlimb morphogenesis" evidence=IEA]
[GO:0035115 "embryonic forelimb morphogenesis" evidence=IEA]
[GO:0030879 "mammary gland development" evidence=IEA] [GO:0009954
"proximal/distal pattern formation" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0008344 "adult locomotory behavior" evidence=IEA] [GO:0007519
"skeletal muscle tissue development" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0048935 "peripheral nervous system neuron
development" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR001356 InterPro:IPR006711
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0045944 GO:GO:0008344
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0035115 GO:GO:0009954
GO:GO:0048704 GO:GO:0035137 GO:GO:0030879 GO:GO:0048935
GO:GO:0007519 GeneTree:ENSGT00700000104054 OMA:SGPEFSC
EMBL:DAAA02004174 IPI:IPI00706320 Ensembl:ENSBTAT00000021336
Uniprot:E1BAG4
Length = 354
Score = 233 (87.1 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 47/75 (62%), Positives = 56/75 (74%)
Query: 226 SPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIW 285
+P W+ ++ RK+ R YT+YQTLELEKEF FN YLTR RR E+A L LTERQ+KIW
Sbjct: 276 NPAANWIHARSTRKK-RCPYTKYQTLELEKEFLFNMYLTRDRRYEVARILNLTERQVKIW 334
Query: 286 FQNRRMKWKKENKSK 300
FQNRRMK KK +K K
Sbjct: 335 FQNRRMKMKKMSKEK 349
Score = 45 (20.9 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 12/26 (46%), Positives = 12/26 (46%)
Query: 87 GAHEGGMEQYPRPDSPSMGHMGPQNG 112
G GG P P PS G GP NG
Sbjct: 133 GGGGGGSGGGPGP-GPSPGPSGPPNG 157
>UNIPROTKB|F1RZG2 [details] [associations]
symbol:HOXD9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048935 "peripheral
nervous system neuron development" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0035137 "hindlimb morphogenesis"
evidence=IEA] [GO:0035115 "embryonic forelimb morphogenesis"
evidence=IEA] [GO:0030879 "mammary gland development" evidence=IEA]
[GO:0009954 "proximal/distal pattern formation" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0007519 "skeletal muscle tissue development" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR001356 InterPro:IPR006711
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0045944 GO:GO:0008344
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0035115 GO:GO:0009954
GO:GO:0048704 GO:GO:0035137 GO:GO:0030879 GO:GO:0048935
GO:GO:0007519 GeneTree:ENSGT00700000104054 OMA:SGPEFSC
EMBL:CU570829 Ensembl:ENSSSCT00000017403 Uniprot:F1RZG2
Length = 353
Score = 233 (87.1 bits), Expect = 1.7e-22, Sum P(2) = 1.7e-22
Identities = 47/75 (62%), Positives = 56/75 (74%)
Query: 226 SPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIW 285
+P W+ ++ RK+ R YT+YQTLELEKEF FN YLTR RR E+A L LTERQ+KIW
Sbjct: 275 NPAANWIHARSTRKK-RCPYTKYQTLELEKEFLFNMYLTRDRRYEVARILNLTERQVKIW 333
Query: 286 FQNRRMKWKKENKSK 300
FQNRRMK KK +K K
Sbjct: 334 FQNRRMKMKKMSKEK 348
Score = 43 (20.2 bits), Expect = 1.7e-22, Sum P(2) = 1.7e-22
Identities = 12/26 (46%), Positives = 12/26 (46%)
Query: 87 GAHEGGMEQYPRPDSPSMGHMGPQNG 112
G GG P P PS G GP NG
Sbjct: 128 GGPGGGGGGGPGP-GPSPGPSGPPNG 152
>RGD|1582908 [details] [associations]
symbol:Hoxd9 "homeo box D9" species:10116 "Rattus norvegicus"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007519 "skeletal muscle tissue development" evidence=IEA]
[GO:0008344 "adult locomotory behavior" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0009954 "proximal/distal pattern formation" evidence=IEA]
[GO:0030879 "mammary gland development" evidence=IEA] [GO:0035115
"embryonic forelimb morphogenesis" evidence=IEA] [GO:0035137
"hindlimb morphogenesis" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA] [GO:0048935 "peripheral nervous system neuron
development" evidence=IEA] InterPro:IPR001356 InterPro:IPR006711
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 RGD:1582908
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOVERGEN:HBG016849 InterPro:IPR017112
PIRSF:PIRSF037109 KO:K09294 CTD:3235 EMBL:BC169092 IPI:IPI00557981
RefSeq:NP_001166940.1 UniGene:Rn.224625 GeneID:688999
KEGG:rno:688999 NextBio:737693 Genevestigator:B5DFK3 Uniprot:B5DFK3
Length = 343
Score = 233 (87.1 bits), Expect = 1.8e-22, Sum P(2) = 1.8e-22
Identities = 47/75 (62%), Positives = 56/75 (74%)
Query: 226 SPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIW 285
+P W+ ++ RK+ R YT+YQTLELEKEF FN YLTR RR E+A L LTERQ+KIW
Sbjct: 265 NPAANWIHARSTRKK-RCPYTKYQTLELEKEFLFNMYLTRDRRYEVARILNLTERQVKIW 323
Query: 286 FQNRRMKWKKENKSK 300
FQNRRMK KK +K K
Sbjct: 324 FQNRRMKMKKMSKEK 338
Score = 42 (19.8 bits), Expect = 1.8e-22, Sum P(2) = 1.8e-22
Identities = 11/29 (37%), Positives = 13/29 (44%)
Query: 87 GAHEGGMEQYPRPDSPSMG-HMG--PQNG 112
G GG P P P+ G H G P+ G
Sbjct: 128 GGGSGGPGPVPSPGGPANGRHYGIKPETG 156
Score = 42 (19.8 bits), Expect = 1.8e-22, Sum P(2) = 1.8e-22
Identities = 23/86 (26%), Positives = 32/86 (37%)
Query: 55 GQVPNNGQPVHGMPYPRFPPYDRMDIRNAAYYGAHEGGMEQYPRPDSP----SMGHMGPQ 110
G VP+ G P +G Y P +AA + R + S G GP+
Sbjct: 135 GPVPSPGGPANGRHYGIKPETGAAPAPSAASTSSSTSSSSSSKRTECSAARESQGSGGPE 194
Query: 111 NGHQTPVV-YASCKLQAAVGNGIIPG 135
+ + A+ AA GNG PG
Sbjct: 195 FPCNSFLRDKAAAAAAAAAGNG--PG 218
Score = 37 (18.1 bits), Expect = 6.0e-22, Sum P(2) = 6.0e-22
Identities = 8/19 (42%), Positives = 8/19 (42%)
Query: 43 PSMYDPRQVHHYGQVPNNG 61
PS P HYG P G
Sbjct: 138 PSPGGPANGRHYGIKPETG 156
>UNIPROTKB|E1C2J1 [details] [associations]
symbol:PDX1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0031017 "exocrine
pancreas development" evidence=IEA] [GO:0031018 "endocrine pancreas
development" evidence=IEA] [GO:0042593 "glucose homeostasis"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0048565
"digestive tract development" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006006 "glucose metabolic process" evidence=IEA]
[GO:0007263 "nitric oxide mediated signal transduction"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0008285 "negative regulation of
cell proliferation" evidence=IEA] [GO:0016331 "morphogenesis of
embryonic epithelium" evidence=IEA] [GO:0030073 "insulin secretion"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0008285 GO:GO:0030154 GO:GO:0008284
GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 GO:GO:0003682
GO:GO:0042593 GO:GO:0006006 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0007263
GO:GO:0030073 GeneTree:ENSGT00700000104446 OMA:PYEVPPI
EMBL:AADN02005194 IPI:IPI00811289 Ensembl:ENSGALT00000036448
Uniprot:E1C2J1
Length = 224
Score = 230 (86.0 bits), Expect = 1.8e-22, Sum P(2) = 1.8e-22
Identities = 45/70 (64%), Positives = 53/70 (75%)
Query: 237 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
E KR R YTR Q LELEKEF FN+Y++R RR+E+A L LTER IKIWFQNRRMKWKKE
Sbjct: 140 ENKRTRTAYTRAQLLELEKEFLFNKYISRPRRVELAVMLNLTERHIKIWFQNRRMKWKKE 199
Query: 297 NKSKDGGSDA 306
K G +++
Sbjct: 200 EDKKRGTANS 209
Score = 45 (20.9 bits), Expect = 1.8e-22, Sum P(2) = 1.8e-22
Identities = 13/44 (29%), Positives = 19/44 (43%)
Query: 11 PDIKNGGVLPPEHHQQHHYGAT-----VLPQNNGVEDPSMYDPR 49
P ++ GV HH HH LP +G + +M +PR
Sbjct: 66 PISEDAGVSHLHHHHHHHPHLPPPHQDALPFADGADPGAMEEPR 109
>UNIPROTKB|P46692 [details] [associations]
symbol:CHOX-CAD1 "Homeobox protein CHOX-CAD" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR006820
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF04731
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
UniGene:Gga.210 HOVERGEN:HBG005302 EMBL:X57760 EMBL:X57761
IPI:IPI00582961 PIR:S16417 ProteinModelPortal:P46692 SMR:P46692
STRING:P46692 InParanoid:P46692 Uniprot:P46692
Length = 248
Score = 206 (77.6 bits), Expect = 1.8e-22, Sum P(2) = 1.8e-22
Identities = 45/76 (59%), Positives = 53/76 (69%)
Query: 242 RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSK- 300
R YT +Q LELEKEFH++RY+T RR+ E+A AL LTERQ+KIWFQNRR K +K NK K
Sbjct: 141 RVVYTDHQRLELEKEFHYSRYITIRRKAELAAALGLTERQVKIWFQNRRAKERKVNKKKL 200
Query: 301 DGGSDAGSDITPATSP 316
S S TP T P
Sbjct: 201 QQQSQPTSTTTP-TPP 215
Score = 69 (29.3 bits), Expect = 1.8e-22, Sum P(2) = 1.8e-22
Identities = 31/102 (30%), Positives = 40/102 (39%)
Query: 28 HYGATVLPQNNGVEDPSMYDPRQVHHYGQVPN-NGQPVHGMPYPRF-PPY-----DRMDI 80
H G + PQN V P Y +H+ VP N P HG P + PY D
Sbjct: 8 HPGLNLNPQNY-VPGPPQYSDFASYHH--VPGINNDPHHGQPAAAWGSPYTPAKEDWHSY 64
Query: 81 RNAAYYGAHEGGMEQYPRPD-SPSMGHMGPQNGHQTPVVYAS 121
AA A G + PD +P H G +G P + +S
Sbjct: 65 GTAAASAATNPGQFGFSPPDFNPMQPHAG--SGLLPPAISSS 104
>UNIPROTKB|P14651 [details] [associations]
symbol:HOXB3 "Homeobox protein Hox-B3" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000979 "RNA polymerase II core promoter sequence-specific DNA
binding" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0021546 "rhombomere development"
evidence=IEA] [GO:0021615 "glossopharyngeal nerve morphogenesis"
evidence=IEA] [GO:0030878 "thyroid gland development" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
[GO:0050767 "regulation of neurogenesis" evidence=IEA] [GO:0051216
"cartilage development" evidence=IEA] [GO:0060216 "definitive
hemopoiesis" evidence=IEA] [GO:0060324 "face development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001525
"angiogenesis" evidence=IEP] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0003700 GO:GO:0006351 GO:GO:0001525
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000122 EMBL:CH471109 GO:GO:0051216 GO:GO:0060324
GO:GO:0048704 GO:GO:0000979 GO:GO:0060216 GO:GO:0050767
GO:GO:0030878 eggNOG:NOG284589 HOGENOM:HOG000252944
HOVERGEN:HBG107984 KO:K09303 InterPro:IPR025281 Pfam:PF13293
GO:GO:0021615 OMA:ATYYDNT OrthoDB:EOG4S4PH1 CTD:3213 EMBL:X16667
EMBL:U59298 EMBL:AF287967 EMBL:AK291182 EMBL:AK315102 EMBL:X16175
IPI:IPI00027259 PIR:S07543 RefSeq:NP_002137.4 UniGene:Hs.654560
ProteinModelPortal:P14651 SMR:P14651 STRING:P14651 DMDM:215274007
PaxDb:P14651 PRIDE:P14651 DNASU:3213 Ensembl:ENST00000311626
Ensembl:ENST00000470495 Ensembl:ENST00000476342
Ensembl:ENST00000498678 GeneID:3213 KEGG:hsa:3213 UCSC:uc002inn.3
GeneCards:GC17M046626 HGNC:HGNC:5114 HPA:CAB009860 MIM:142966
neXtProt:NX_P14651 PharmGKB:PA29390 InParanoid:P14651
PhylomeDB:P14651 ChiTaRS:HOXB3 GenomeRNAi:3213 NextBio:12784
ArrayExpress:P14651 Bgee:P14651 CleanEx:HS_HOXB3
Genevestigator:P14651 GermOnline:ENSG00000120093 GO:GO:0021546
Uniprot:P14651
Length = 431
Score = 243 (90.6 bits), Expect = 2.3e-22, Sum P(2) = 2.3e-22
Identities = 49/78 (62%), Positives = 59/78 (75%)
Query: 239 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
KR R YT Q +ELEKEFHFNRYL R RR+E+A+ L L+ERQIKIWFQNRRMK+KK+ K
Sbjct: 189 KRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQK 248
Query: 299 SKDGGSDAGSDITPATSP 316
+K S +G +PA SP
Sbjct: 249 AKGLASSSGGP-SPAGSP 265
Score = 40 (19.1 bits), Expect = 2.3e-22, Sum P(2) = 2.3e-22
Identities = 5/14 (35%), Positives = 11/14 (78%)
Query: 220 TSASLPSPLYPWMR 233
T+++L ++PWM+
Sbjct: 121 TNSTLTKQIFPWMK 134
>MGI|MGI:96210 [details] [associations]
symbol:Hoxd9 "homeobox D9" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007519 "skeletal muscle tissue development" evidence=IGI]
[GO:0008344 "adult locomotory behavior" evidence=IGI] [GO:0009952
"anterior/posterior pattern specification" evidence=IGI;IMP]
[GO:0009954 "proximal/distal pattern formation" evidence=IGI;IMP]
[GO:0030879 "mammary gland development" evidence=IGI] [GO:0035115
"embryonic forelimb morphogenesis" evidence=IGI;IMP] [GO:0035136
"forelimb morphogenesis" evidence=IGI] [GO:0035137 "hindlimb
morphogenesis" evidence=IGI] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IGI]
[GO:0048706 "embryonic skeletal system development"
evidence=IGI;IMP] [GO:0048935 "peripheral nervous system neuron
development" evidence=IGI] InterPro:IPR001356 InterPro:IPR006711
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 MGI:MGI:96210
GO:GO:0005634 GO:GO:0009952 GO:GO:0003677 GO:GO:0043565
GO:GO:0045944 GO:GO:0008344 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
eggNOG:NOG286554 GO:GO:0035115 GO:GO:0009954 GO:GO:0048704
GO:GO:0035137 GO:GO:0030879 GO:GO:0048935 GO:GO:0007519
GeneTree:ENSGT00700000104054 HOVERGEN:HBG016849
HOGENOM:HOG000231180 OrthoDB:EOG4D26QZ InterPro:IPR017112
PIRSF:PIRSF037109 KO:K09294 EMBL:X62669 EMBL:AL928644 CTD:3235
OMA:SGPEFSC EMBL:AK134427 EMBL:AK144746 EMBL:BC019150 EMBL:X14714
IPI:IPI00119641 PIR:S20880 RefSeq:NP_038583.1 UniGene:Mm.26544
ProteinModelPortal:P28357 SMR:P28357 STRING:P28357
PhosphoSite:P28357 PRIDE:P28357 Ensembl:ENSMUST00000059272
GeneID:15438 KEGG:mmu:15438 UCSC:uc008kdz.1 InParanoid:Q3UMQ3
NextBio:288218 Bgee:P28357 CleanEx:MM_HOXD9 Genevestigator:P28357
GermOnline:ENSMUSG00000043342 Uniprot:P28357
Length = 339
Score = 233 (87.1 bits), Expect = 4.7e-22, Sum P(2) = 4.7e-22
Identities = 47/75 (62%), Positives = 56/75 (74%)
Query: 226 SPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIW 285
+P W+ ++ RK+ R YT+YQTLELEKEF FN YLTR RR E+A L LTERQ+KIW
Sbjct: 261 NPAANWIHARSTRKK-RCPYTKYQTLELEKEFLFNMYLTRDRRYEVARILNLTERQVKIW 319
Query: 286 FQNRRMKWKKENKSK 300
FQNRRMK KK +K K
Sbjct: 320 FQNRRMKMKKMSKEK 334
Score = 38 (18.4 bits), Expect = 4.7e-22, Sum P(2) = 4.7e-22
Identities = 21/84 (25%), Positives = 28/84 (33%)
Query: 55 GQVPNNGQPVHGMPYPRFPPYDRMDIRNAAYYGAHEG--GMEQYPRPDSPSMGHMGPQNG 112
G VP+ G P +G Y P AA + R + + G
Sbjct: 133 GPVPSPGGPANGRHYGIKPETGAAPAPAAASTSSSSSTSSSSSSKRTECSAARESQGSGG 192
Query: 113 HQTPV-VYASCKLQAAVGNGIIPG 135
+ P + K AA GNG PG
Sbjct: 193 PEFPCNSFLRDKAAAATGNG--PG 214
Score = 37 (18.1 bits), Expect = 6.0e-22, Sum P(2) = 6.0e-22
Identities = 8/19 (42%), Positives = 8/19 (42%)
Query: 43 PSMYDPRQVHHYGQVPNNG 61
PS P HYG P G
Sbjct: 136 PSPGGPANGRHYGIKPETG 154
>RGD|62387 [details] [associations]
symbol:Pdx1 "pancreatic and duodenal homeobox 1" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0001046 "core promoter sequence-specific DNA binding"
evidence=IDA] [GO:0001889 "liver development" evidence=IEA;ISO]
[GO:0003309 "type B pancreatic cell differentiation"
evidence=ISO;IMP] [GO:0003677 "DNA binding" evidence=ISO]
[GO:0003682 "chromatin binding" evidence=IEA;ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO;IMP;TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IEA] [GO:0006006 "glucose metabolic process"
evidence=IEA;ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0007224 "smoothened signaling pathway"
evidence=IMP] [GO:0007263 "nitric oxide mediated signal
transduction" evidence=IEA;ISO] [GO:0007417 "central nervous system
development" evidence=IEP] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0008284 "positive regulation of cell
proliferation" evidence=ISO;IMP] [GO:0008285 "negative regulation of
cell proliferation" evidence=IEA;ISO] [GO:0009611 "response to
wounding" evidence=IEP] [GO:0009749 "response to glucose stimulus"
evidence=IEP;IMP] [GO:0010040 "response to iron(II) ion"
evidence=IEP] [GO:0010157 "response to chlorate" evidence=IEP]
[GO:0010260 "organ senescence" evidence=IEP] [GO:0010942 "positive
regulation of cell death" evidence=IMP] [GO:0014070 "response to
organic cyclic compound" evidence=IEP] [GO:0016331 "morphogenesis of
embryonic epithelium" evidence=IEA;ISO] [GO:0030073 "insulin
secretion" evidence=IEA;ISO] [GO:0030154 "cell differentiation"
evidence=ISO;IMP] [GO:0031016 "pancreas development"
evidence=IEP;ISO] [GO:0031017 "exocrine pancreas development"
evidence=IEA;ISO] [GO:0031018 "endocrine pancreas development"
evidence=ISO] [GO:0031100 "organ regeneration" evidence=IEP]
[GO:0031667 "response to nutrient levels" evidence=IEP] [GO:0032024
"positive regulation of insulin secretion" evidence=IMP] [GO:0032403
"protein complex binding" evidence=IDA;IPI] [GO:0033273 "response to
vitamin" evidence=IEP] [GO:0033993 "response to lipid" evidence=IEP]
[GO:0034097 "response to cytokine stimulus" evidence=IEP]
[GO:0035094 "response to nicotine" evidence=IEP] [GO:0042127
"regulation of cell proliferation" evidence=ISO] [GO:0042493
"response to drug" evidence=IEP] [GO:0042593 "glucose homeostasis"
evidence=ISO;IMP] [GO:0043201 "response to leucine" evidence=IEP]
[GO:0043279 "response to alkaloid" evidence=IEP] [GO:0043388
"positive regulation of DNA binding" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=ISO;IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO;IMP] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;IDA;IMP] [GO:0046982
"protein heterodimerization activity" evidence=IDA] [GO:0048565
"digestive tract development" evidence=IEA;ISO] [GO:0048863 "stem
cell differentiation" evidence=IEP;IMP] [GO:0051384 "response to
glucocorticoid stimulus" evidence=IEP] [GO:0051594 "detection of
glucose" evidence=IDA] [GO:0060290 "transdifferentiation"
evidence=IEP] [GO:0070542 "response to fatty acid" evidence=IEP]
[GO:0003705 "RNA polymerase II distal enhancer sequence-specific DNA
binding transcription factor activity" evidence=IDA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:62387
GO:GO:0005829 GO:GO:0005634 GO:GO:0005737 GO:GO:0045892
GO:GO:0009611 GO:GO:0032403 GO:GO:0042493 GO:GO:0070542
GO:GO:0008284 GO:GO:0031100 GO:GO:0034097 GO:GO:0045944
GO:GO:0048863 GO:GO:0051384 GO:GO:0007417 GO:GO:0032024
GO:GO:0003700 GO:GO:0042593 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0006366 GO:GO:0010942
GO:GO:0035094 GO:GO:0046982 GO:GO:0007224 GO:GO:0001046
GO:GO:0043388 GO:GO:0060290 GO:GO:0010260 GO:GO:0003309
GO:GO:0051594 GO:GO:0033273 GO:GO:0043201 GO:GO:0010157 CTD:3651
HOVERGEN:HBG004525 KO:K07594 EMBL:U04833 EMBL:S67435 IPI:IPI00327500
PIR:S42634 RefSeq:NP_074043.3 UniGene:Rn.54603
ProteinModelPortal:P52947 SMR:P52947 MINT:MINT-1894530
PhosphoSite:P52947 GeneID:29535 KEGG:rno:29535 NextBio:609520
Genevestigator:P52947 Uniprot:P52947
Length = 283
Score = 233 (87.1 bits), Expect = 4.7e-22, Sum P(2) = 4.7e-22
Identities = 46/72 (63%), Positives = 55/72 (76%)
Query: 237 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
E KR R YTR Q LELEKEF FN+Y++R RR+E+A L LTER IKIWFQNRRMKWKKE
Sbjct: 145 ENKRTRTAYTRAQLLELEKEFLFNKYISRPRRVELAVMLNLTERHIKIWFQNRRMKWKKE 204
Query: 297 -NKSKDGGSDAG 307
+K + G+ +G
Sbjct: 205 EDKKRSSGTTSG 216
Score = 38 (18.4 bits), Expect = 4.7e-22, Sum P(2) = 4.7e-22
Identities = 13/40 (32%), Positives = 17/40 (42%)
Query: 20 PPEHHQQHHYGATV-L------PQNNGVEDPSMYDPRQVH 52
P H HH A + L P NG E + +P +VH
Sbjct: 77 PAGAHLHHHLPAQLGLAHPPPGPFPNGTETGGLEEPSRVH 116
>UNIPROTKB|A5PKI4 [details] [associations]
symbol:HOXB3 "HOXB3 protein" species:9913 "Bos taurus"
[GO:0005634 "nucleus" evidence=IEA] [GO:0060324 "face development"
evidence=IEA] [GO:0060216 "definitive hemopoiesis" evidence=IEA]
[GO:0051216 "cartilage development" evidence=IEA] [GO:0050767
"regulation of neurogenesis" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0030878 "thyroid
gland development" evidence=IEA] [GO:0021615 "glossopharyngeal
nerve morphogenesis" evidence=IEA] [GO:0021546 "rhombomere
development" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0000979 "RNA polymerase II core promoter
sequence-specific DNA binding" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0009952 GO:GO:0003700
GO:GO:0001525 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0051216 GO:GO:0060324
GO:GO:0048704 GO:GO:0000979 GO:GO:0060216 GO:GO:0050767
GO:GO:0030878 GeneTree:ENSGT00700000104189 eggNOG:NOG284589
HOGENOM:HOG000252944 HOVERGEN:HBG107984 KO:K09303
InterPro:IPR025281 Pfam:PF13293 GO:GO:0021615 OMA:ATYYDNT
OrthoDB:EOG4S4PH1 CTD:3213 GO:GO:0021546 EMBL:DAAA02049067
EMBL:BC142499 IPI:IPI00706525 RefSeq:NP_001092644.1
UniGene:Bt.27955 SMR:A5PKI4 Ensembl:ENSBTAT00000028563
GeneID:618214 KEGG:bta:618214 InParanoid:A5PKI4 NextBio:20901061
Uniprot:A5PKI4
Length = 426
Score = 243 (90.6 bits), Expect = 5.6e-22, Sum P(2) = 5.6e-22
Identities = 49/78 (62%), Positives = 59/78 (75%)
Query: 239 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
KR R YT Q +ELEKEFHFNRYL R RR+E+A+ L L+ERQIKIWFQNRRMK+KK+ K
Sbjct: 184 KRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQK 243
Query: 299 SKDGGSDAGSDITPATSP 316
+K S +G +PA SP
Sbjct: 244 AKGLASSSGGP-SPAGSP 260
Score = 36 (17.7 bits), Expect = 5.6e-22, Sum P(2) = 5.6e-22
Identities = 4/14 (28%), Positives = 11/14 (78%)
Query: 220 TSASLPSPLYPWMR 233
++++L ++PWM+
Sbjct: 121 SNSTLTKQIFPWMK 134
>RGD|1310780 [details] [associations]
symbol:Hoxb3 "homeo box B3" species:10116 "Rattus norvegicus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO] [GO:0000979 "RNA
polymerase II core promoter sequence-specific DNA binding"
evidence=IEA;ISO] [GO:0001525 "angiogenesis" evidence=IEA;ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA;ISO] [GO:0021546 "rhombomere development"
evidence=IEA;ISO] [GO:0021615 "glossopharyngeal nerve
morphogenesis" evidence=IEA;ISO] [GO:0030878 "thyroid gland
development" evidence=IEA;ISO] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA;ISO] [GO:0050767 "regulation of
neurogenesis" evidence=IEA;ISO] [GO:0051216 "cartilage development"
evidence=IEA;ISO] [GO:0060216 "definitive hemopoiesis"
evidence=IEA;ISO] [GO:0060324 "face development" evidence=IEA;ISO]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 RGD:1310780 GO:GO:0005634
GO:GO:0009952 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122
GO:GO:0051216 GO:GO:0060324 GO:GO:0048704 GO:GO:0000979
GO:GO:0060216 GO:GO:0050767 GO:GO:0030878
GeneTree:ENSGT00700000104189 eggNOG:NOG284589 HOGENOM:HOG000252944
HOVERGEN:HBG107984 InterPro:IPR025281 Pfam:PF13293 GO:GO:0021615
OrthoDB:EOG4S4PH1 GO:GO:0021546 EMBL:BC166859 IPI:IPI00194971
UniGene:Rn.208556 SMR:B2RYQ0 STRING:B2RYQ0
Ensembl:ENSRNOT00000011027 Genevestigator:B2RYQ0 Uniprot:B2RYQ0
Length = 428
Score = 243 (90.6 bits), Expect = 5.8e-22, Sum P(2) = 5.8e-22
Identities = 49/78 (62%), Positives = 59/78 (75%)
Query: 239 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
KR R YT Q +ELEKEFHFNRYL R RR+E+A+ L L+ERQIKIWFQNRRMK+KK+ K
Sbjct: 187 KRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQK 246
Query: 299 SKDGGSDAGSDITPATSP 316
+K S +G +PA SP
Sbjct: 247 AKGLASSSGGP-SPAGSP 263
Score = 36 (17.7 bits), Expect = 5.8e-22, Sum P(2) = 5.8e-22
Identities = 4/14 (28%), Positives = 11/14 (78%)
Query: 220 TSASLPSPLYPWMR 233
++++L ++PWM+
Sbjct: 121 SNSTLTKQIFPWMK 134
>MGI|MGI:96184 [details] [associations]
symbol:Hoxb3 "homeobox B3" species:10090 "Mus musculus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0000979 "RNA polymerase
II core promoter sequence-specific DNA binding" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IGI] [GO:0021546 "rhombomere development" evidence=IDA]
[GO:0021615 "glossopharyngeal nerve morphogenesis" evidence=IGI]
[GO:0030878 "thyroid gland development" evidence=IGI] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IGI;IMP]
[GO:0050767 "regulation of neurogenesis" evidence=IDA] [GO:0051216
"cartilage development" evidence=IGI] [GO:0060216 "definitive
hemopoiesis" evidence=IGI] [GO:0060324 "face development"
evidence=IDA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 MGI:MGI:96184
GO:GO:0005634 GO:GO:0009952 GO:GO:0003700 GO:GO:0006351
GO:GO:0001525 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0051216 GO:GO:0060324
GO:GO:0048704 GO:GO:0000979 GO:GO:0060216 GO:GO:0050767
GO:GO:0030878 GeneTree:ENSGT00700000104189 eggNOG:NOG284589
HOGENOM:HOG000252944 HOVERGEN:HBG107984 KO:K09303
InterPro:IPR025281 Pfam:PF13293 GO:GO:0021615 OMA:ATYYDNT
OrthoDB:EOG4S4PH1 CTD:3213 GO:GO:0021546 EMBL:X66177 EMBL:S35628
EMBL:U02278 EMBL:M18168 IPI:IPI00315401 PIR:S20963
RefSeq:NP_001073338.1 RefSeq:NP_034588.2 UniGene:Mm.342481
ProteinModelPortal:P09026 SMR:P09026 STRING:P09026 PaxDb:P09026
PRIDE:P09026 Ensembl:ENSMUST00000055334 Ensembl:ENSMUST00000093944
GeneID:15410 KEGG:mmu:15410 InParanoid:P09026 NextBio:288128
Bgee:P09026 CleanEx:MM_HOXB3 Genevestigator:P09026
GermOnline:ENSMUSG00000048763 Uniprot:P09026
Length = 433
Score = 243 (90.6 bits), Expect = 6.4e-22, Sum P(2) = 6.4e-22
Identities = 49/78 (62%), Positives = 59/78 (75%)
Query: 239 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
KR R YT Q +ELEKEFHFNRYL R RR+E+A+ L L+ERQIKIWFQNRRMK+KK+ K
Sbjct: 192 KRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQK 251
Query: 299 SKDGGSDAGSDITPATSP 316
+K S +G +PA SP
Sbjct: 252 AKGLASSSGGP-SPAGSP 268
Score = 36 (17.7 bits), Expect = 6.4e-22, Sum P(2) = 6.4e-22
Identities = 4/14 (28%), Positives = 11/14 (78%)
Query: 220 TSASLPSPLYPWMR 233
++++L ++PWM+
Sbjct: 121 SNSTLTKQIFPWMK 134
>UNIPROTKB|P28356 [details] [associations]
symbol:HOXD9 "Homeobox protein Hox-D9" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0007519 "skeletal muscle tissue
development" evidence=IEA] [GO:0008344 "adult locomotory behavior"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0009954 "proximal/distal pattern
formation" evidence=IEA] [GO:0030879 "mammary gland development"
evidence=IEA] [GO:0035115 "embryonic forelimb morphogenesis"
evidence=IEA] [GO:0035137 "hindlimb morphogenesis" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0048935
"peripheral nervous system neuron development" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001356
InterPro:IPR006711 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF04617 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565
GO:GO:0045944 GO:GO:0008344 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
eggNOG:NOG286554 GO:GO:0035115 GO:GO:0009954 GO:GO:0048704
GO:GO:0035137 GO:GO:0030879 GO:GO:0048935 GO:GO:0007519
EMBL:AC009336 HOVERGEN:HBG016849 HOGENOM:HOG000231180
OrthoDB:EOG4D26QZ InterPro:IPR017112 PIRSF:PIRSF037109 KO:K09294
EMBL:X59372 EMBL:BC044855 EMBL:X15506 IPI:IPI00942462 PIR:S18649
RefSeq:NP_055028.3 UniGene:Hs.236646 ProteinModelPortal:P28356
SMR:P28356 IntAct:P28356 STRING:P28356 PhosphoSite:P28356
DMDM:294862543 PRIDE:P28356 Ensembl:ENST00000249499 GeneID:3235
KEGG:hsa:3235 UCSC:uc010zex.2 CTD:3235 GeneCards:GC02P176951
HGNC:HGNC:5140 MIM:142982 neXtProt:NX_P28356 PharmGKB:PA29414
InParanoid:P28356 OMA:SGPEFSC GenomeRNAi:3235 NextBio:12875
Bgee:P28356 CleanEx:HS_HOXD9 Genevestigator:P28356
GermOnline:ENSG00000128709 Uniprot:P28356
Length = 352
Score = 233 (87.1 bits), Expect = 7.0e-22, Sum P(2) = 7.0e-22
Identities = 47/75 (62%), Positives = 56/75 (74%)
Query: 226 SPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIW 285
+P W+ ++ RK+ R YT+YQTLELEKEF FN YLTR RR E+A L LTERQ+KIW
Sbjct: 274 NPAANWIHARSTRKK-RCPYTKYQTLELEKEFLFNMYLTRDRRYEVARILNLTERQVKIW 332
Query: 286 FQNRRMKWKKENKSK 300
FQNRRMK KK +K K
Sbjct: 333 FQNRRMKMKKMSKEK 347
Score = 37 (18.1 bits), Expect = 7.0e-22, Sum P(2) = 7.0e-22
Identities = 12/27 (44%), Positives = 12/27 (44%)
Query: 87 GAHEGGMEQYPRPD-SPSMGHMGPQNG 112
GA GG P PS G GP NG
Sbjct: 129 GAGGGGGGGGGGPGRGPSPGPSGPANG 155
>UNIPROTKB|E1BZG3 [details] [associations]
symbol:HOXD3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007160 "cell-matrix adhesion" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0010628 "positive
regulation of gene expression" evidence=IEA] [GO:0021615
"glossopharyngeal nerve morphogenesis" evidence=IEA] [GO:0030878
"thyroid gland development" evidence=IEA] [GO:0045666 "positive
regulation of neuron differentiation" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA] [GO:0051216
"cartilage development" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0007219 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0007160
GO:GO:0010628 GeneTree:ENSGT00700000104189 KO:K09303
InterPro:IPR025281 Pfam:PF13293 CTD:3232 OMA:PECTMQK
EMBL:AADN02020018 IPI:IPI00588035 RefSeq:XP_428765.2
Ensembl:ENSGALT00000038692 GeneID:431212 KEGG:gga:431212
NextBio:20830712 Uniprot:E1BZG3
Length = 413
Score = 231 (86.4 bits), Expect = 7.5e-22, Sum P(2) = 7.5e-22
Identities = 50/79 (63%), Positives = 58/79 (73%)
Query: 239 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
KR R YT Q +ELEKEFHFNRYL R RR+E+A+ L LTERQIKIWFQNRRMK+KK+ K
Sbjct: 179 KRVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK 238
Query: 299 SKD-GGSDAGSDITPATSP 316
+K S AG +P SP
Sbjct: 239 AKGIMHSPAGQ--SPERSP 255
Score = 47 (21.6 bits), Expect = 7.5e-22, Sum P(2) = 7.5e-22
Identities = 7/24 (29%), Positives = 14/24 (58%)
Query: 221 SASLPSPLYPWMRSQFERKRGRQT 244
SA+L ++PWM+ + + + T
Sbjct: 137 SATLSKQIFPWMKESRQNSKQKST 160
>UNIPROTKB|Q9DEB6 [details] [associations]
symbol:CDX1 "Homeobox protein CDX-1" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0060349 "bone
morphogenesis" evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR006820 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF04731 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 HSSP:P02833
GeneTree:ENSGT00530000063388 GO:GO:0000976 eggNOG:NOG291290
KO:K09312 EMBL:AB046532 IPI:IPI00807211 RefSeq:NP_990007.2
UniGene:Gga.210 ProteinModelPortal:Q9DEB6 SMR:Q9DEB6 STRING:Q9DEB6
Ensembl:ENSGALT00000009108 GeneID:395397 KEGG:gga:395397 CTD:1044
HOGENOM:HOG000115975 HOVERGEN:HBG005302 InParanoid:Q9DEB6
OrthoDB:EOG42FSK7 NextBio:20815481 Uniprot:Q9DEB6
Length = 260
Score = 206 (77.6 bits), Expect = 7.6e-22, Sum P(2) = 7.6e-22
Identities = 45/76 (59%), Positives = 53/76 (69%)
Query: 242 RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSK- 300
R YT +Q LELEKEFH++RY+T RR+ E+A AL LTERQ+KIWFQNRR K +K NK K
Sbjct: 153 RVVYTDHQRLELEKEFHYSRYITIRRKAELAAALGLTERQVKIWFQNRRAKERKVNKKKL 212
Query: 301 DGGSDAGSDITPATSP 316
S S TP T P
Sbjct: 213 QQQSQPTSTTTP-TPP 227
Score = 63 (27.2 bits), Expect = 7.6e-22, Sum P(2) = 7.6e-22
Identities = 30/102 (29%), Positives = 39/102 (38%)
Query: 28 HYGATVLPQNNGVEDPSMYDPRQVHHYGQVPN-NGQPVHGMPYPRF-PPY-----DRMDI 80
H + PQN V P Y +H+ VP N P HG P + PY D
Sbjct: 20 HPSLNLNPQNY-VPGPPQYSDFASYHH--VPGINNDPHHGQPAAAWGSPYTPAKEDWHSY 76
Query: 81 RNAAYYGAHEGGMEQYPRPD-SPSMGHMGPQNGHQTPVVYAS 121
AA A G + PD +P H G +G P + +S
Sbjct: 77 GTAAASAATNPGQFGFSPPDFNPMQPHAG--SGLLPPAISSS 116
>WB|WBGene00003024 [details] [associations]
symbol:lin-39 species:6239 "Caenorhabditis elegans"
[GO:0043565 "sequence-specific DNA binding" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0018991 "oviposition" evidence=IMP] [GO:0040026
"positive regulation of vulval development" evidence=IGI;IMP]
[GO:0040027 "negative regulation of vulval development"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0016477
"cell migration" evidence=IMP] [GO:0007411 "axon guidance"
evidence=IMP] [GO:0040025 "vulval development" evidence=IEP]
[GO:0042659 "regulation of cell fate specification" evidence=IMP]
[GO:0051302 "regulation of cell division" evidence=IMP] [GO:0045026
"plasma membrane fusion" evidence=IMP] [GO:0007265 "Ras protein
signal transduction" evidence=IEP] [GO:0009952 "anterior/posterior
pattern specification" evidence=IMP] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0018991 GO:GO:0007411 GO:GO:0007265 GO:GO:0016477
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 KO:K09311
GO:GO:0040025 GO:GO:0040027 GO:GO:0040026 GO:GO:0042659
GO:GO:0051302 EMBL:FO080423 GeneTree:ENSGT00700000104189
GO:GO:0045026 eggNOG:NOG236516 EMBL:L19639 EMBL:L19248 PIR:B40722
RefSeq:NP_001021164.1 UniGene:Cel.19645 ProteinModelPortal:P34684
SMR:P34684 IntAct:P34684 MINT:MINT-114843 STRING:P34684
EnsemblMetazoa:C07H6.7.1 EnsemblMetazoa:C07H6.7.2 GeneID:176068
KEGG:cel:CELE_C07H6.7 UCSC:C07H6.7.2 CTD:176068 WormBase:C07H6.7
HOGENOM:HOG000113332 InParanoid:P34684 OMA:KEFHTHK NextBio:890972
Uniprot:P34684
Length = 253
Score = 254 (94.5 bits), Expect = 9.0e-22, P = 9.0e-22
Identities = 51/80 (63%), Positives = 58/80 (72%)
Query: 228 LYPWMRSQFE-------RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTER 280
+YPWM KR R YTR Q LELEKEFH ++YLTR+RRIE+AH+L LTER
Sbjct: 148 VYPWMTRVHSTTGGSRGEKRQRTAYTRNQVLELEKEFHTHKYLTRKRRIEVAHSLMLTER 207
Query: 281 QIKIWFQNRRMKWKKENKSK 300
Q+KIWFQNRRMK KKENK K
Sbjct: 208 QVKIWFQNRRMKHKKENKDK 227
>UNIPROTKB|E1BBQ5 [details] [associations]
symbol:PDX1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048565 "digestive
tract development" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0042593 "glucose homeostasis" evidence=IEA] [GO:0031018
"endocrine pancreas development" evidence=IEA] [GO:0031017
"exocrine pancreas development" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0030073 "insulin secretion"
evidence=IEA] [GO:0016331 "morphogenesis of embryonic epithelium"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0008284 "positive regulation of
cell proliferation" evidence=IEA] [GO:0007263 "nitric oxide
mediated signal transduction" evidence=IEA] [GO:0006006 "glucose
metabolic process" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001889 "liver development"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104446 CTD:3651 KO:K07594 OMA:PYEVPPI
EMBL:DAAA02033158 IPI:IPI00716405 RefSeq:NP_001179065.1
UniGene:Bt.87929 PRIDE:E1BBQ5 Ensembl:ENSBTAT00000014141
GeneID:538927 KEGG:bta:538927 NextBio:20877667 Uniprot:E1BBQ5
Length = 285
Score = 231 (86.4 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 49/79 (62%), Positives = 56/79 (70%)
Query: 237 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
E KR R YTR Q LELEKEF FN+Y++R RR+E+A L LTER IKIWFQNRRMKWKKE
Sbjct: 147 ENKRTRTAYTRAQLLELEKEFLFNKYISRPRRVELAVMLNLTERHIKIWFQNRRMKWKKE 206
Query: 297 -NKSKDGGSDA--GSDITP 312
+K + G A G D P
Sbjct: 207 EDKKRSCGPPAAGGGDAEP 225
Score = 36 (17.7 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 15/51 (29%), Positives = 19/51 (37%)
Query: 97 PRPDSPSMGHMGPQNGHQTPVVYASCKLQAA-VGNGIIPGP-ESPNDLVDP 145
P D P+M H+ H P A A +G PG E P + P
Sbjct: 74 PLADDPAMAHLH----HHLPAQLALAHPPAGPFQDGADPGALEEPGSVQLP 120
>UNIPROTKB|F1RSW4 [details] [associations]
symbol:PDX1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104446
OMA:PYEVPPI EMBL:FP236498 Ensembl:ENSSSCT00000010200
ArrayExpress:F1RSW4 Uniprot:F1RSW4
Length = 284
Score = 231 (86.4 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 49/79 (62%), Positives = 57/79 (72%)
Query: 237 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
E KR R YTR Q LELEKEF FN+Y++R RR+E+A L LTER IKIWFQNRRMKWKKE
Sbjct: 146 ENKRTRTAYTRAQLLELEKEFLFNKYISRPRRVELAVMLNLTERHIKIWFQNRRMKWKKE 205
Query: 297 -NKSKDGGSDA--GSDITP 312
+K + G+ A G D P
Sbjct: 206 EDKKRSCGTVAAGGGDAEP 224
Score = 36 (17.7 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 5/8 (62%), Positives = 7/8 (87%)
Query: 227 PLYPWMRS 234
P +PWM+S
Sbjct: 118 PPFPWMKS 125
>UNIPROTKB|E1C7F6 [details] [associations]
symbol:CDX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR006820
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF04731
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00530000063388 EMBL:AADN02013531 IPI:IPI00588048
Ensembl:ENSGALT00000012400 OMA:GKTRTRE NextBio:20824965
Uniprot:E1C7F6
Length = 279
Score = 201 (75.8 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 50/107 (46%), Positives = 65/107 (60%)
Query: 229 YPWMRSQFE---------RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 279
Y WMR + R++ R YT +Q LELEKEFH+NRY+T RR+ E+A L L+E
Sbjct: 134 YEWMRKTVQSTSTGKTRTREKYRVVYTDHQRLELEKEFHYNRYITIRRKSELAANLRLSE 193
Query: 280 RQIKIWFQNRRMKWKKENKSK----DGG------SDAGSDITPATSP 316
RQ+KIWFQNRR K +K K K DG SD+GS ++P +P
Sbjct: 194 RQVKIWFQNRRAKERKLMKKKMTHFDGSNLGSMQSDSGS-VSPMPAP 239
Score = 66 (28.3 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 33/113 (29%), Positives = 41/113 (36%)
Query: 34 LPQNNGVEDPSMYDPRQVHHYGQVPNNGQPVHGMPYPRFPPYDRMDIRNAAYYGAHEGGM 93
LP N V P D HH ++GQP G P + P R D NA YG G
Sbjct: 25 LPVQNFVPAPPYSDYMGYHHVPAPDSHGQPA-GAWGPHYGP-QREDW-NA--YGPCPGPS 79
Query: 94 EQYPRPDSPSMGHMGPQNGHQTPVVYASCKLQAAVGNGIIPGPESPNDLVDPT 146
+ + P G +P Y+S L A G+ P V PT
Sbjct: 80 GTAA---AAQLSGSSPGQGSYSPAEYSS--LHPAAPGGLPPAGTVGTQQVSPT 127
>UNIPROTKB|F1RWG6 [details] [associations]
symbol:HOXB3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0060324 "face
development" evidence=IEA] [GO:0060216 "definitive hemopoiesis"
evidence=IEA] [GO:0051216 "cartilage development" evidence=IEA]
[GO:0050767 "regulation of neurogenesis" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA] [GO:0030878
"thyroid gland development" evidence=IEA] [GO:0021615
"glossopharyngeal nerve morphogenesis" evidence=IEA] [GO:0021546
"rhombomere development" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0001525 "angiogenesis" evidence=IEA] [GO:0000979 "RNA
polymerase II core promoter sequence-specific DNA binding"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0009952 GO:GO:0003700
GO:GO:0001525 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0051216 GO:GO:0060324
GO:GO:0048704 GO:GO:0000979 GO:GO:0060216 GO:GO:0050767
GO:GO:0030878 GeneTree:ENSGT00700000104189 InterPro:IPR025281
Pfam:PF13293 GO:GO:0021615 OMA:ATYYDNT GO:GO:0021546 EMBL:CU856160
Ensembl:ENSSSCT00000019088 Uniprot:F1RWG6
Length = 431
Score = 238 (88.8 bits), Expect = 2.3e-21, Sum P(2) = 2.3e-21
Identities = 48/78 (61%), Positives = 57/78 (73%)
Query: 239 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
KR R YT Q +ELEKEFHFNRYL R RR+E+A+ L ERQIKIWFQNRRMK+KK+ K
Sbjct: 188 KRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLTSAERQIKIWFQNRRMKYKKDQK 247
Query: 299 SKDGGSDAGSDITPATSP 316
+K S +G +PA SP
Sbjct: 248 AKGLASSSGGP-SPAGSP 264
Score = 36 (17.7 bits), Expect = 2.3e-21, Sum P(2) = 2.3e-21
Identities = 4/14 (28%), Positives = 11/14 (78%)
Query: 220 TSASLPSPLYPWMR 233
++++L ++PWM+
Sbjct: 121 SNSTLTKQIFPWMK 134
>UNIPROTKB|I3L383 [details] [associations]
symbol:HOXB8 "Homeobox protein Hox-B8" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 EMBL:AC103702 HGNC:HGNC:5119 Ensembl:ENST00000498634
Uniprot:I3L383
Length = 128
Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 47/57 (82%), Positives = 53/57 (92%)
Query: 245 YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSKD 301
Y+RYQTLELEKEF FN YLTR+RRIE++HAL LTERQ+KIWFQNRRMKWKKEN +KD
Sbjct: 2 YSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKEN-NKD 57
>UNIPROTKB|P31249 [details] [associations]
symbol:HOXD3 "Homeobox protein Hox-D3" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0021615 "glossopharyngeal nerve
morphogenesis" evidence=IEA] [GO:0007219 "Notch signaling pathway"
evidence=IMP] [GO:0010628 "positive regulation of gene expression"
evidence=IMP] [GO:0007160 "cell-matrix adhesion" evidence=IDA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=ISS] [GO:0030878 "thyroid gland development" evidence=ISS]
[GO:0045666 "positive regulation of neuron differentiation"
evidence=ISS] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=ISS] [GO:0051216 "cartilage development" evidence=ISS]
[GO:0006351 "transcription, DNA-dependent" evidence=IMP]
[GO:0005634 "nucleus" evidence=IC] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0007219 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0051216 GO:GO:0007160 GO:GO:0045666
GO:GO:0010628 GO:GO:0048704 GO:GO:0030878 EMBL:AC009336
eggNOG:NOG284589 HOGENOM:HOG000252944 HOVERGEN:HBG107984 KO:K09303
InterPro:IPR025281 Pfam:PF13293 GO:GO:0021615 EMBL:D11117
EMBL:Y09980 EMBL:BC005124 EMBL:BC008789 IPI:IPI00215882 PIR:S15548
PIR:S27198 RefSeq:NP_008829.3 UniGene:Hs.93574
ProteinModelPortal:P31249 SMR:P31249 IntAct:P31249 STRING:P31249
PhosphoSite:P31249 DMDM:224471887 PRIDE:P31249 DNASU:3232
Ensembl:ENST00000249440 Ensembl:ENST00000410016
Ensembl:ENST00000468418 GeneID:3232 KEGG:hsa:3232 UCSC:uc002ukt.1
CTD:3232 GeneCards:GC02P177001 HGNC:HGNC:5137 HPA:HPA051831
MIM:142980 neXtProt:NX_P31249 PharmGKB:PA29411 InParanoid:P31249
OMA:PECTMQK PhylomeDB:P31249 GenomeRNAi:3232 NextBio:12861
ArrayExpress:P31249 Bgee:P31249 CleanEx:HS_HOXD3
Genevestigator:P31249 GermOnline:ENSG00000128652 Uniprot:P31249
Length = 432
Score = 231 (86.4 bits), Expect = 3.5e-21, Sum P(2) = 3.5e-21
Identities = 48/78 (61%), Positives = 58/78 (74%)
Query: 239 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
KR R YT Q +ELEKEFHFNRYL R RR+E+A+ L LTERQIKIWFQNRRMK+KK+ K
Sbjct: 195 KRVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK 254
Query: 299 SKDGGSDAGSDITPATSP 316
+K G + + +P SP
Sbjct: 255 AK-GILHSPASQSPERSP 271
Score = 42 (19.8 bits), Expect = 3.5e-21, Sum P(2) = 3.5e-21
Identities = 7/24 (29%), Positives = 15/24 (62%)
Query: 220 TSASLPSPLYPWMRSQFERKRGRQ 243
+SA++ ++PWM+ R+ +Q
Sbjct: 152 SSATISKQIFPWMKES--RQNSKQ 173
>RGD|1586210 [details] [associations]
symbol:Hoxc4 "homeo box C4" species:10116 "Rattus norvegicus"
[GO:0001501 "skeletal system development" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA;ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0048562 "embryonic organ morphogenesis" evidence=IEA;ISO]
[GO:0051216 "cartilage development" evidence=IEA;ISO] [GO:0071837
"HMG box domain binding" evidence=IEA;ISO] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1586210
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 eggNOG:NOG305812 EMBL:M37567 IPI:IPI00195532
PIR:C43559 UniGene:Rn.12051 ProteinModelPortal:P18865 SMR:P18865
STRING:P18865 UCSC:RGD:1586210 Genevestigator:P18865 Uniprot:P18865
Length = 76
Score = 248 (92.4 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 45/53 (84%), Positives = 50/53 (94%)
Query: 247 RYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKS 299
R Q LELEKEFH+NRYLTRRRRIEIAH+LCL+ERQIKIWFQNRRMKWKK++ S
Sbjct: 20 RQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKKDHDS 72
>UNIPROTKB|P18865 [details] [associations]
symbol:Hoxc4 "Homeobox protein Hox-C4" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1586210
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 eggNOG:NOG305812 EMBL:M37567 IPI:IPI00195532
PIR:C43559 UniGene:Rn.12051 ProteinModelPortal:P18865 SMR:P18865
STRING:P18865 UCSC:RGD:1586210 Genevestigator:P18865 Uniprot:P18865
Length = 76
Score = 248 (92.4 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 45/53 (84%), Positives = 50/53 (94%)
Query: 247 RYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKS 299
R Q LELEKEFH+NRYLTRRRRIEIAH+LCL+ERQIKIWFQNRRMKWKK++ S
Sbjct: 20 RQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKKDHDS 72
>UNIPROTKB|E2RGV4 [details] [associations]
symbol:HOXD3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0051216
"cartilage development" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0045666 "positive
regulation of neuron differentiation" evidence=IEA] [GO:0030878
"thyroid gland development" evidence=IEA] [GO:0021615
"glossopharyngeal nerve morphogenesis" evidence=IEA] [GO:0010628
"positive regulation of gene expression" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0007219 "Notch signaling pathway" evidence=IEA] [GO:0007160
"cell-matrix adhesion" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565
GO:GO:0007219 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0051216
GO:GO:0007160 GO:GO:0045666 GO:GO:0010628 GO:GO:0048704
GO:GO:0030878 GeneTree:ENSGT00700000104189 KO:K09303
InterPro:IPR025281 Pfam:PF13293 GO:GO:0021615 CTD:3232 OMA:PECTMQK
EMBL:AAEX03017792 RefSeq:XP_545539.2 Ensembl:ENSCAFT00000021350
GeneID:488417 KEGG:cfa:488417 NextBio:20861770 Uniprot:E2RGV4
Length = 431
Score = 230 (86.0 bits), Expect = 4.6e-21, Sum P(2) = 4.6e-21
Identities = 50/79 (63%), Positives = 58/79 (73%)
Query: 239 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
KR R YT Q +ELEKEFHFNRYL R RR+E+A+ L LTERQIKIWFQNRRMK+KK+ K
Sbjct: 194 KRVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK 253
Query: 299 SKDG-GSDAGSDITPATSP 316
+K S AG +P SP
Sbjct: 254 AKGILHSPAGQ--SPERSP 270
Score = 42 (19.8 bits), Expect = 4.6e-21, Sum P(2) = 4.6e-21
Identities = 7/24 (29%), Positives = 15/24 (62%)
Query: 220 TSASLPSPLYPWMRSQFERKRGRQ 243
+SA++ ++PWM+ R+ +Q
Sbjct: 151 SSATISKQIFPWMKES--RQNSKQ 172
>UNIPROTKB|E1B856 [details] [associations]
symbol:HOXD3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0051216 "cartilage
development" evidence=IEA] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IEA] [GO:0045666 "positive regulation of
neuron differentiation" evidence=IEA] [GO:0030878 "thyroid gland
development" evidence=IEA] [GO:0021615 "glossopharyngeal nerve
morphogenesis" evidence=IEA] [GO:0010628 "positive regulation of
gene expression" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IEA] [GO:0007160 "cell-matrix adhesion"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565
GO:GO:0007219 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0051216
GO:GO:0007160 GO:GO:0045666 GO:GO:0010628 GO:GO:0048704
GO:GO:0030878 GeneTree:ENSGT00700000104189 KO:K09303
InterPro:IPR025281 Pfam:PF13293 GO:GO:0021615 CTD:3232 OMA:PECTMQK
EMBL:DAAA02004173 IPI:IPI00709010 RefSeq:XP_002685351.1
RefSeq:XP_002703632.1 UniGene:Bt.105461 Ensembl:ENSBTAT00000006353
GeneID:100295744 KEGG:bta:100295744 Uniprot:E1B856
Length = 434
Score = 230 (86.0 bits), Expect = 4.8e-21, Sum P(2) = 4.8e-21
Identities = 50/79 (63%), Positives = 58/79 (73%)
Query: 239 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
KR R YT Q +ELEKEFHFNRYL R RR+E+A+ L LTERQIKIWFQNRRMK+KK+ K
Sbjct: 197 KRVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK 256
Query: 299 SKDG-GSDAGSDITPATSP 316
+K S AG +P SP
Sbjct: 257 AKGILHSPAGQ--SPERSP 273
Score = 42 (19.8 bits), Expect = 4.8e-21, Sum P(2) = 4.8e-21
Identities = 7/24 (29%), Positives = 15/24 (62%)
Query: 220 TSASLPSPLYPWMRSQFERKRGRQ 243
+SA++ ++PWM+ R+ +Q
Sbjct: 154 SSATISKQIFPWMKES--RQNSKQ 175
>UNIPROTKB|F1RZF9 [details] [associations]
symbol:HOXD3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0051216 "cartilage
development" evidence=IEA] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IEA] [GO:0045666 "positive regulation of
neuron differentiation" evidence=IEA] [GO:0030878 "thyroid gland
development" evidence=IEA] [GO:0021615 "glossopharyngeal nerve
morphogenesis" evidence=IEA] [GO:0010628 "positive regulation of
gene expression" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IEA] [GO:0007160 "cell-matrix adhesion"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565
GO:GO:0007219 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0051216
GO:GO:0007160 GO:GO:0045666 GO:GO:0010628 GO:GO:0048704
GO:GO:0030878 GeneTree:ENSGT00700000104189 InterPro:IPR025281
Pfam:PF13293 GO:GO:0021615 OMA:PECTMQK EMBL:CU570829
Ensembl:ENSSSCT00000017406 Uniprot:F1RZF9
Length = 435
Score = 230 (86.0 bits), Expect = 4.9e-21, Sum P(2) = 4.9e-21
Identities = 50/79 (63%), Positives = 58/79 (73%)
Query: 239 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
KR R YT Q +ELEKEFHFNRYL R RR+E+A+ L LTERQIKIWFQNRRMK+KK+ K
Sbjct: 198 KRVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK 257
Query: 299 SKDG-GSDAGSDITPATSP 316
+K S AG +P SP
Sbjct: 258 AKGILHSPAGQ--SPERSP 274
Score = 42 (19.8 bits), Expect = 4.9e-21, Sum P(2) = 4.9e-21
Identities = 7/24 (29%), Positives = 15/24 (62%)
Query: 220 TSASLPSPLYPWMRSQFERKRGRQ 243
+SA++ ++PWM+ R+ +Q
Sbjct: 152 SSATISKQIFPWMKES--RQNSKQ 173
>UNIPROTKB|F6RKN3 [details] [associations]
symbol:HOXA10 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104054 EMBL:DAAA02010938 EMBL:DAAA02010937
IPI:IPI00867074 Ensembl:ENSBTAT00000056468 Uniprot:F6RKN3
Length = 284
Score = 219 (82.2 bits), Expect = 6.6e-21, Sum P(2) = 6.6e-21
Identities = 42/68 (61%), Positives = 55/68 (80%)
Query: 231 WMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRR 290
W+ ++ RK+ R YT++QTLELEKEF FN YLTR RR+EI+ ++ LT+RQ+KIWFQNRR
Sbjct: 204 WLTAKSGRKK-RCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRR 262
Query: 291 MKWKKENK 298
MK KK N+
Sbjct: 263 MKLKKMNR 270
Score = 41 (19.5 bits), Expect = 6.6e-21, Sum P(2) = 6.6e-21
Identities = 19/77 (24%), Positives = 29/77 (37%)
Query: 68 PYPRFPPYDRMDIRNAAYYGAHEGGMEQYPRPDSPSMGHMGPQNGHQTPVVYASCKLQAA 127
P+PR PP D + ++ G G + + + G+ G G P + A
Sbjct: 62 PFPRGPPPDGCTLGTSS--GVPVPGYFRLSQAYGTTKGYGGGGGG--APQLGAGPFPAQP 117
Query: 128 VGNGIIPGPESPNDLVD 144
G G P P + VD
Sbjct: 118 PGRGFDPPPALASSSVD 134
>MGI|MGI:96207 [details] [associations]
symbol:Hoxd3 "homeobox D3" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007160 "cell-matrix adhesion" evidence=ISO] [GO:0007219 "Notch
signaling pathway" evidence=ISO] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IGI;IMP]
[GO:0010628 "positive regulation of gene expression" evidence=ISO]
[GO:0021615 "glossopharyngeal nerve morphogenesis" evidence=IGI]
[GO:0030878 "thyroid gland development" evidence=IGI] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045666 "positive
regulation of neuron differentiation" evidence=IGI] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IGI;IMP]
[GO:0051216 "cartilage development" evidence=IGI]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 MGI:MGI:96207 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0007219 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0051216 GO:GO:0007160 GO:GO:0045666
GO:GO:0010628 GO:GO:0048704 GO:GO:0030878 eggNOG:NOG284589
HOGENOM:HOG000252944 HOVERGEN:HBG107984 KO:K09303
InterPro:IPR025281 Pfam:PF13293 GO:GO:0021615 OrthoDB:EOG4S4PH1
CTD:3232 OMA:PECTMQK EMBL:U03485 EMBL:U03496 EMBL:X73573
EMBL:L24363 EMBL:U56400 EMBL:U56401 EMBL:AK138525 EMBL:M18169
IPI:IPI00132385 PIR:D29585 PIR:S34164 PIR:S47539 RefSeq:NP_034598.2
UniGene:Mm.430708 ProteinModelPortal:P09027 SMR:P09027
STRING:P09027 PhosphoSite:P09027 PRIDE:P09027
Ensembl:ENSMUST00000047830 Ensembl:ENSMUST00000053932
Ensembl:ENSMUST00000111982 Ensembl:ENSMUST00000111983 GeneID:15434
KEGG:mmu:15434 InParanoid:P09027 NextBio:288206 Bgee:P09027
CleanEx:MM_HOXD3 Genevestigator:P09027
GermOnline:ENSMUSG00000042464 Uniprot:P09027
Length = 433
Score = 230 (86.0 bits), Expect = 9.7e-21, Sum P(2) = 9.7e-21
Identities = 50/79 (63%), Positives = 58/79 (73%)
Query: 239 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
KR R YT Q +ELEKEFHFNRYL R RR+E+A+ L LTERQIKIWFQNRRMK+KK+ K
Sbjct: 196 KRVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK 255
Query: 299 SKDG-GSDAGSDITPATSP 316
+K S AG +P SP
Sbjct: 256 AKGILHSPAGQ--SPERSP 272
Score = 39 (18.8 bits), Expect = 9.7e-21, Sum P(2) = 9.7e-21
Identities = 6/24 (25%), Positives = 15/24 (62%)
Query: 220 TSASLPSPLYPWMRSQFERKRGRQ 243
+S+++ ++PWM+ R+ +Q
Sbjct: 153 SSSTISKQIFPWMKES--RQNSKQ 174
>UNIPROTKB|Q08820 [details] [associations]
symbol:hoxd1 "Homeobox protein Hox-D1" species:8355
"Xenopus laevis" [GO:0030902 "hindbrain development" evidence=IMP]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0030902 KO:K09301 HOVERGEN:HBG006089 CTD:3231 EMBL:M63873
EMBL:L25857 EMBL:BC106402 EMBL:X62052 PIR:A40357
RefSeq:NP_001084035.1 UniGene:Xl.53491 ProteinModelPortal:Q08820
SMR:Q08820 GeneID:399267 KEGG:xla:399267 Xenbase:XB-GENE-482735
Uniprot:Q08820
Length = 300
Score = 194 (73.4 bits), Expect = 1.0e-20, Sum P(2) = 1.0e-20
Identities = 37/57 (64%), Positives = 44/57 (77%)
Query: 242 RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
R +T Q ELEKEFHFN+YLTR RRIEIA++L L + Q+KIWFQNRRMK KK +
Sbjct: 204 RTNFTTKQLTELEKEFHFNKYLTRARRIEIANSLQLNDTQVKIWFQNRRMKQKKRER 260
Score = 65 (27.9 bits), Expect = 1.0e-20, Sum P(2) = 1.0e-20
Identities = 17/55 (30%), Positives = 22/55 (40%)
Query: 73 PPYDRMDIRNAAYYGAHEGGMEQYPRPDSPSMGHMGPQNGHQTPVVYASCKLQAA 127
P + R D RN G + P G + Q HQ+P +YA C L A
Sbjct: 18 PKFCRSDHRNMNLQPYPRSGADHSFMPVGGVPGSVAHQAPHQSPALYAPCSLDVA 72
>UNIPROTKB|J9NW05 [details] [associations]
symbol:HOXB3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GeneTree:ENSGT00700000104189 InterPro:IPR025281 Pfam:PF13293
OMA:ATYYDNT EMBL:AAEX03006513 EMBL:AAEX03006514
Ensembl:ENSCAFT00000042839 Uniprot:J9NW05
Length = 436
Score = 232 (86.7 bits), Expect = 1.2e-20, Sum P(2) = 1.2e-20
Identities = 49/80 (61%), Positives = 59/80 (73%)
Query: 239 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTER--QIKIWFQNRRMKWKKE 296
KR R YT Q +ELEKEFHFNRYL R RR+E+A+ L L+ER QIKIWFQNRRMK+KK+
Sbjct: 192 KRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERERQIKIWFQNRRMKYKKD 251
Query: 297 NKSKDGGSDAGSDITPATSP 316
K+K S +G +PA SP
Sbjct: 252 QKAKGLASSSGGP-SPAGSP 270
Score = 36 (17.7 bits), Expect = 1.2e-20, Sum P(2) = 1.2e-20
Identities = 4/14 (28%), Positives = 11/14 (78%)
Query: 220 TSASLPSPLYPWMR 233
++++L ++PWM+
Sbjct: 121 SNSTLTKQIFPWMK 134
>UNIPROTKB|B7Z5N8 [details] [associations]
symbol:HOXB3 "cDNA FLJ51054, highly similar to Homeobox
protein Hox-B3" species:9606 "Homo sapiens" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0000979 "RNA
polymerase II core promoter sequence-specific DNA binding"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0021546 "rhombomere development"
evidence=IEA] [GO:0021615 "glossopharyngeal nerve morphogenesis"
evidence=IEA] [GO:0030878 "thyroid gland development" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
[GO:0050767 "regulation of neurogenesis" evidence=IEA] [GO:0051216
"cartilage development" evidence=IEA] [GO:0060216 "definitive
hemopoiesis" evidence=IEA] [GO:0060324 "face development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0009952 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122
GO:GO:0051216 GO:GO:0060324 GO:GO:0048704 GO:GO:0000979
GO:GO:0060216 GO:GO:0050767 GO:GO:0030878 HOGENOM:HOG000252944
HOVERGEN:HBG107984 InterPro:IPR025281 Pfam:PF13293 GO:GO:0021615
EMBL:AC103702 UniGene:Hs.654560 HGNC:HGNC:5114 ChiTaRS:HOXB3
GO:GO:0021546 EMBL:AK299226 IPI:IPI00947370 SMR:B7Z5N8
STRING:B7Z5N8 Ensembl:ENST00000460160 Ensembl:ENST00000485909
Uniprot:B7Z5N8
Length = 299
Score = 243 (90.6 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 49/78 (62%), Positives = 59/78 (75%)
Query: 239 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
KR R YT Q +ELEKEFHFNRYL R RR+E+A+ L L+ERQIKIWFQNRRMK+KK+ K
Sbjct: 57 KRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQK 116
Query: 299 SKDGGSDAGSDITPATSP 316
+K S +G +PA SP
Sbjct: 117 AKGLASSSGGP-SPAGSP 133
>UNIPROTKB|F8VXG0 [details] [associations]
symbol:HOXB3 "Homeobox protein Hox-B3" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
InterPro:IPR025281 Pfam:PF13293 EMBL:AC103702 HGNC:HGNC:5114
ChiTaRS:HOXB3 IPI:IPI01022378 ProteinModelPortal:F8VXG0 SMR:F8VXG0
Ensembl:ENST00000490677 ArrayExpress:F8VXG0 Bgee:F8VXG0
Uniprot:F8VXG0
Length = 297
Score = 243 (90.6 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 49/78 (62%), Positives = 59/78 (75%)
Query: 239 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
KR R YT Q +ELEKEFHFNRYL R RR+E+A+ L L+ERQIKIWFQNRRMK+KK+ K
Sbjct: 55 KRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQK 114
Query: 299 SKDGGSDAGSDITPATSP 316
+K S +G +PA SP
Sbjct: 115 AKGLASSSGGP-SPAGSP 131
>ZFIN|ZDB-GENE-000328-5 [details] [associations]
symbol:hoxc9a "homeo box C9a" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:2001213 "negative
regulation of vasculogenesis" evidence=IGI] [GO:0007275
"multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR006711 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-000328-5 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104054 HOVERGEN:HBG016849
HOGENOM:HOG000231180 InterPro:IPR017112 PIRSF:PIRSF037109
EMBL:BX005254 OMA:NNPVANW GO:GO:2001213 IPI:IPI00484007
UniGene:Dr.132199 SMR:A2BE65 Ensembl:ENSDART00000127384
InParanoid:A2BE65 Uniprot:A2BE65
Length = 270
Score = 243 (90.6 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 48/80 (60%), Positives = 59/80 (73%)
Query: 226 SPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIW 285
+P+ W+ ++ RK+ R YT+YQTLELEKEF FN YLTR RR E+A L LTERQ+KIW
Sbjct: 191 NPVANWIHARSTRKK-RCPYTKYQTLELEKEFLFNMYLTRDRRYEVARVLNLTERQVKIW 249
Query: 286 FQNRRMKWKKENKSKDGGSD 305
FQNRRMK KK NK K+ +
Sbjct: 250 FQNRRMKMKKMNKEKNDSKE 269
>FB|FBgn0051481 [details] [associations]
symbol:pb "proboscipedia" species:7227 "Drosophila
melanogaster" [GO:0005634 "nucleus" evidence=ISS;NAS;IDA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;NAS] [GO:0007381
"specification of segmental identity, labial segment"
evidence=IMP;NAS] [GO:0007382 "specification of segmental identity,
maxillary segment" evidence=IMP;NAS] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0048728 "proboscis development"
evidence=IMP] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 EMBL:AE014297
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 EMBL:AE001572
eggNOG:NOG321520 GO:GO:0048728 GO:GO:0007381 EMBL:S94723
EMBL:S94709 EMBL:S94714 EMBL:S94717 EMBL:S94719 EMBL:X63729
EMBL:X63728 PIR:S20881 RefSeq:NP_476669.3 RefSeq:NP_996161.1
RefSeq:NP_996162.1 RefSeq:NP_996163.1 UniGene:Dm.5646
ProteinModelPortal:P31264 SMR:P31264 STRING:P31264
EnsemblMetazoa:FBtr0089276 GeneID:40826 KEGG:dme:Dmel_CG31481
UCSC:CG31481-RA CTD:40826 FlyBase:FBgn0051481
GeneTree:ENSGT00700000104446 InParanoid:P31264 KO:K09302
OMA:FEAPPIN OrthoDB:EOG4H189X PhylomeDB:P31264 GenomeRNAi:40826
NextBio:820784 Bgee:P31264 GermOnline:CG31481 GO:GO:0007382
Uniprot:P31264
Length = 782
Score = 217 (81.4 bits), Expect = 1.5e-20, Sum P(3) = 1.5e-20
Identities = 43/67 (64%), Positives = 50/67 (74%)
Query: 239 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
+R R YT Q LELEKEFHFN+YL R RRIEIA +L LTERQ+K+WFQNRRMK K++
Sbjct: 199 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTL 258
Query: 299 SKDGGSD 305
SK D
Sbjct: 259 SKTDDED 265
Score = 41 (19.5 bits), Expect = 1.5e-20, Sum P(3) = 1.5e-20
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 227 PLYPWMRSQFERKRGRQT 244
P YPWM+ E+K R++
Sbjct: 163 PEYPWMK---EKKTSRKS 177
Score = 40 (19.1 bits), Expect = 1.5e-20, Sum P(3) = 1.5e-20
Identities = 19/80 (23%), Positives = 32/80 (40%)
Query: 73 PPYDRMDIRNAAYYGAHEGGMEQYPRPDSPSMGHMGPQNGH-QTPV-------VYASCKL 124
P D+ A + A EGG + + H+ P++ TPV V + +
Sbjct: 80 PNCDKRSADTAYWMTASEGGFINSQPSMAEFLNHLSPESPKIGTPVGSGAIGGVGVNVNV 139
Query: 125 QAAVGNGIIPG--PESPNDL 142
VG G G P++P+ +
Sbjct: 140 NVGVGVGYPVGVVPQTPDGM 159
>UNIPROTKB|F1N2F0 [details] [associations]
symbol:HOXC9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR006711
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0048704 GeneTree:ENSGT00700000104054 InterPro:IPR017112
PIRSF:PIRSF037109 OMA:NNPVANW EMBL:DAAA02012841 IPI:IPI00698690
Ensembl:ENSBTAT00000007361 Uniprot:F1N2F0
Length = 263
Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 50/77 (64%), Positives = 58/77 (75%)
Query: 225 PS-PLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIK 283
PS P+ W+ ++ RK+ R YT+YQTLELEKEF FN YLTR RR E+A L LTERQ+K
Sbjct: 182 PSNPVANWIHARSTRKK-RCPYTKYQTLELEKEFLFNMYLTRDRRYEVARVLNLTERQVK 240
Query: 284 IWFQNRRMKWKKENKSK 300
IWFQNRRMK KK NK K
Sbjct: 241 IWFQNRRMKMKKMNKEK 257
>UNIPROTKB|P31274 [details] [associations]
symbol:HOXC9 "Homeobox protein Hox-C9" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR006711 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 EMBL:CH471054 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0048704 PDB:2LP0 PDBsum:2LP0 HOVERGEN:HBG016849
InterPro:IPR017112 PIRSF:PIRSF037109 KO:K09294 EMBL:AY014302
EMBL:AY014301 EMBL:AK000445 EMBL:AK315194 EMBL:BC053894
IPI:IPI00644080 PIR:S15532 RefSeq:NP_008828.1 UniGene:Hs.658823
ProteinModelPortal:P31274 SMR:P31274 IntAct:P31274 STRING:P31274
DMDM:20141537 PRIDE:P31274 DNASU:3225 Ensembl:ENST00000303450
Ensembl:ENST00000508190 GeneID:3225 KEGG:hsa:3225 UCSC:uc001seq.3
CTD:3225 GeneCards:GC12P054388 HGNC:HGNC:5130 MIM:142971
neXtProt:NX_P31274 PharmGKB:PA29405 eggNOG:NOG288226
InParanoid:P31274 OMA:NNPVANW OrthoDB:EOG4SXNCJ PhylomeDB:P31274
GenomeRNAi:3225 NextBio:12835 Bgee:P31274 CleanEx:HS_HOXC9
Genevestigator:P31274 GermOnline:ENSG00000180806 Uniprot:P31274
Length = 260
Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 50/77 (64%), Positives = 58/77 (75%)
Query: 225 PS-PLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIK 283
PS P+ W+ ++ RK+ R YT+YQTLELEKEF FN YLTR RR E+A L LTERQ+K
Sbjct: 179 PSNPVANWIHARSTRKK-RCPYTKYQTLELEKEFLFNMYLTRDRRYEVARVLNLTERQVK 237
Query: 284 IWFQNRRMKWKKENKSK 300
IWFQNRRMK KK NK K
Sbjct: 238 IWFQNRRMKMKKMNKEK 254
>MGI|MGI:96199 [details] [associations]
symbol:Hoxc9 "homeobox C9" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IGI;IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IMP] [GO:0048706 "embryonic skeletal system development"
evidence=IGI] InterPro:IPR001356 InterPro:IPR006711
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 MGI:MGI:96199
GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0048704 GeneTree:ENSGT00700000104054
HOVERGEN:HBG016849 HOGENOM:HOG000231180 InterPro:IPR017112
PIRSF:PIRSF037109 KO:K09294 EMBL:M35603 CTD:3225 eggNOG:NOG288226
OMA:NNPVANW OrthoDB:EOG4SXNCJ EMBL:X55318 EMBL:AK012173
EMBL:AK078758 EMBL:BC050838 EMBL:X07647 IPI:IPI00109000 PIR:A43821
RefSeq:NP_032298.1 UniGene:Mm.4765 ProteinModelPortal:P09633
SMR:P09633 IntAct:P09633 MINT:MINT-1172589 STRING:P09633
PRIDE:P09633 Ensembl:ENSMUST00000001706 GeneID:15427 KEGG:mmu:15427
UCSC:uc007xxa.1 InParanoid:P09633 NextBio:288182 Bgee:P09633
CleanEx:MM_HOXC9 Genevestigator:P09633
GermOnline:ENSMUSG00000036139 Uniprot:P09633
Length = 260
Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 50/77 (64%), Positives = 58/77 (75%)
Query: 225 PS-PLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIK 283
PS P+ W+ ++ RK+ R YT+YQTLELEKEF FN YLTR RR E+A L LTERQ+K
Sbjct: 179 PSNPVANWIHARSTRKK-RCPYTKYQTLELEKEFLFNMYLTRDRRYEVARVLNLTERQVK 237
Query: 284 IWFQNRRMKWKKENKSK 300
IWFQNRRMK KK NK K
Sbjct: 238 IWFQNRRMKMKKMNKEK 254
>UNIPROTKB|P31260 [details] [associations]
symbol:HOXA10 "Homeobox protein Hox-A10" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0001501 "skeletal system development"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0009954 "proximal/distal pattern
formation" evidence=IEA] [GO:0030326 "embryonic limb morphogenesis"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=TAS] [GO:0007283 "spermatogenesis" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0009952
EMBL:CH471073 GO:GO:0043565 GO:GO:0003700 GO:GO:0007283
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0030326 GO:GO:0001501
Pathway_Interaction_DB:hdac_classiii_pathway GO:GO:0009954
EMBL:AC004080 EMBL:X58430 EMBL:AF040714 EMBL:AK312450 EMBL:BC013971
EMBL:BC071843 EMBL:BC094807 EMBL:M30599 EMBL:S69027 EMBL:S69029
IPI:IPI00170686 IPI:IPI00941400 PIR:I65264 PIR:I65265 PIR:S26402
PIR:S28814 RefSeq:NP_061824.3 UniGene:Hs.110637 UniGene:Hs.659350
ProteinModelPortal:P31260 SMR:P31260 IntAct:P31260 STRING:P31260
PhosphoSite:P31260 DMDM:294862509 PRIDE:P31260 DNASU:3206
Ensembl:ENST00000283921 Ensembl:ENST00000396344 GeneID:3206
KEGG:hsa:3206 UCSC:uc011jzm.2 CTD:3206 GeneCards:GC07M027210
HGNC:HGNC:5100 HPA:CAB019384 MIM:142957 neXtProt:NX_P31260
PharmGKB:PA29377 eggNOG:NOG248153 HOGENOM:HOG000231182
HOVERGEN:HBG052934 InParanoid:P31260 KO:K09295 OMA:CRMEPPD
ChiTaRS:HOXA10 GenomeRNAi:3206 NextBio:12756 ArrayExpress:P31260
Bgee:P31260 CleanEx:HS_HOXA10 Genevestigator:P31260
GermOnline:ENSG00000153807 Uniprot:P31260
Length = 410
Score = 219 (82.2 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20
Identities = 42/68 (61%), Positives = 55/68 (80%)
Query: 231 WMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRR 290
W+ ++ RK+ R YT++QTLELEKEF FN YLTR RR+EI+ ++ LT+RQ+KIWFQNRR
Sbjct: 330 WLTAKSGRKK-RCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRR 388
Query: 291 MKWKKENK 298
MK KK N+
Sbjct: 389 MKLKKMNR 396
Score = 47 (21.6 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20
Identities = 20/89 (22%), Positives = 34/89 (38%)
Query: 34 LPQNNGVEDPSMYDPRQVHH----YGQVPNNGQPVHGMPYPRFPPYDRMDIRNAAYYGAH 89
L ++GV P + Q + YG Q + P+P PP D+ A G+
Sbjct: 202 LGTSSGVPVPGYFRLSQAYGTAKGYGSGGGGAQQLGAGPFPAQPPGRGFDLPPALASGSA 261
Query: 90 EGGMEQY----PRPDSPSMGHMGPQNGHQ 114
+ ++ P P + + G G G +
Sbjct: 262 DAARKERALDSPPPPTLACGSGGGSQGDE 290
Score = 36 (17.7 bits), Expect = 2.4e-19, Sum P(2) = 2.4e-19
Identities = 6/9 (66%), Positives = 7/9 (77%)
Query: 68 PYPRFPPYD 76
P+PR PP D
Sbjct: 190 PFPRGPPPD 198
>MGI|MGI:96183 [details] [associations]
symbol:Hoxb2 "homeobox B2" species:10090 "Mus musculus"
[GO:0002011 "morphogenesis of an epithelial sheet" evidence=IGI]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IGI;IMP] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IGI] [GO:0021569 "rhombomere 3 development" evidence=IGI]
[GO:0021570 "rhombomere 4 development" evidence=IGI] [GO:0021612
"facial nerve structural organization" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IGI] [GO:0048705
"skeletal system morphogenesis" evidence=IGI;IMP] [GO:0048857
"neural nucleus development" evidence=IMP] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 MGI:MGI:96183 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0009953
GO:GO:0048704 GO:GO:0002011 GO:GO:0021612
GeneTree:ENSGT00700000104446 KO:K09302 GO:GO:0021569 GO:GO:0021570
HOGENOM:HOG000063664 HOVERGEN:HBG006088 CTD:3212 eggNOG:NOG295272
OMA:RAAWEAC OrthoDB:EOG4QC167 GO:GO:0048857 EMBL:AL606824
EMBL:BC138494 EMBL:BC138495 IPI:IPI00124385 RefSeq:NP_598793.2
UniGene:Mm.281153 ProteinModelPortal:P0C1T1 SMR:P0C1T1
STRING:P0C1T1 PhosphoSite:P0C1T1 PRIDE:P0C1T1
Ensembl:ENSMUST00000100523 GeneID:103889 KEGG:mmu:103889
UCSC:uc007lby.1 InParanoid:P0C1T1 NextBio:356175 Bgee:P0C1T1
CleanEx:MM_HOXB2 Genevestigator:P0C1T1 Uniprot:P0C1T1
Length = 354
Score = 214 (80.4 bits), Expect = 1.8e-20, Sum P(2) = 1.8e-20
Identities = 46/85 (54%), Positives = 56/85 (65%)
Query: 239 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
+R R YT Q LELEKEFHFN+YL R RR+EIA L LTERQ+K+WFQNRRMK K++ +
Sbjct: 142 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 201
Query: 299 SKD------GGSDAGSDI-TPATSP 316
++ GG A D PA P
Sbjct: 202 HREPPEGEPGGPSAQDDAGEPAEEP 226
Score = 47 (21.6 bits), Expect = 1.8e-20, Sum P(2) = 1.8e-20
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 225 PSPLYPWMRSQFERKRGRQT 244
P+P +PWM+ + K+ Q+
Sbjct: 89 PAPEFPWMKEKKSTKKPSQS 108
>UNIPROTKB|Q08727 [details] [associations]
symbol:HOXA2 "Homeobox protein Hox-A2" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 KO:K09302
HOVERGEN:HBG006088 CTD:3199 EMBL:X74323 IPI:IPI00584066 PIR:I50589
PIR:S35941 RefSeq:NP_990481.1 UniGene:Gga.524
ProteinModelPortal:Q08727 SMR:Q08727 GeneID:396055 KEGG:gga:396055
NextBio:20816115 Uniprot:Q08727
Length = 375
Score = 214 (80.4 bits), Expect = 2.5e-20, Sum P(2) = 2.5e-20
Identities = 41/69 (59%), Positives = 51/69 (73%)
Query: 239 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
+R R YT Q LELEKEFHFN+YL R RR+EIA L LTERQ+K+WFQNRRMK K++ +
Sbjct: 141 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 200
Query: 299 SKDGGSDAG 307
K+ + G
Sbjct: 201 CKENQNGEG 209
Score = 48 (22.0 bits), Expect = 2.5e-20, Sum P(2) = 2.5e-20
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 225 PSPLYPWMRSQFERKR 240
P P YPWM+ + KR
Sbjct: 91 PPPEYPWMKEKKASKR 106
>UNIPROTKB|D4A426 [details] [associations]
symbol:100365058 "Homeo box B2 (Predicted)" species:10116
"Rattus norvegicus" [GO:0002011 "morphogenesis of an epithelial
sheet" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0009953 "dorsal/ventral pattern
formation" evidence=IEA] [GO:0021569 "rhombomere 3 development"
evidence=IEA] [GO:0021570 "rhombomere 4 development" evidence=IEA]
[GO:0021612 "facial nerve structural organization" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
[GO:0048857 "neural nucleus development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0009953 GO:GO:0048704
EMBL:CH473948 GO:GO:0002011 GO:GO:0021612
GeneTree:ENSGT00700000104446 KO:K09302 GO:GO:0021569 GO:GO:0021570
CTD:3212 OrthoDB:EOG4QC167 GO:GO:0048857 IPI:IPI00958412
RefSeq:XP_002724587.1 RefSeq:XP_002727852.1 UniGene:Rn.231109
Ensembl:ENSRNOT00000011213 GeneID:100361765 KEGG:rno:100361765
UCSC:RGD:2319509 Uniprot:D4A426
Length = 355
Score = 213 (80.0 bits), Expect = 2.5e-20, Sum P(2) = 2.5e-20
Identities = 46/85 (54%), Positives = 56/85 (65%)
Query: 239 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
+R R YT Q LELEKEFHFN+YL R RR+EIA L LTERQ+K+WFQNRRMK K++ +
Sbjct: 143 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 202
Query: 299 SKD------GGSDAGSDI-TPATSP 316
++ GG A D PA P
Sbjct: 203 HREPPDGEPGGLSAQDDAGEPAEEP 227
Score = 47 (21.6 bits), Expect = 2.5e-20, Sum P(2) = 2.5e-20
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 225 PSPLYPWMRSQFERKRGRQT 244
P+P +PWM+ + K+ Q+
Sbjct: 90 PAPEFPWMKEKKSAKKPSQS 109
>UNIPROTKB|F1MD21 [details] [associations]
symbol:HOXA2 "Homeobox protein Hox-A2" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048703 "embryonic
viscerocranium morphogenesis" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0042474 "middle ear morphogenesis"
evidence=IEA] [GO:0035284 "brain segmentation" evidence=IEA]
[GO:0021658 "rhombomere 3 morphogenesis" evidence=IEA] [GO:0021568
"rhombomere 2 development" evidence=IEA] [GO:0009953
"dorsal/ventral pattern formation" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0008045 "motor neuron axon guidance" evidence=IEA] [GO:0007379
"segment specification" evidence=IEA] [GO:0002076 "osteoblast
development" evidence=IEA] [GO:0001709 "cell fate determination"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0045944 GO:GO:0045665
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0008045 GO:GO:0002076
GO:GO:0007379 GO:GO:0009953 GO:GO:0001709 GO:GO:0035284
GO:GO:0048703 GO:GO:0042474 GO:GO:0021568
GeneTree:ENSGT00700000104446 IPI:IPI00689409 UniGene:Bt.111374
OMA:NCGSGLN GO:GO:0021658 EMBL:DAAA02010939
Ensembl:ENSBTAT00000010699 Uniprot:F1MD21
Length = 372
Score = 215 (80.7 bits), Expect = 2.9e-20, Sum P(2) = 2.9e-20
Identities = 41/69 (59%), Positives = 51/69 (73%)
Query: 239 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
+R R YT Q LELEKEFHFN+YL R RR+EIA L LTERQ+K+WFQNRRMK K++ +
Sbjct: 140 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 199
Query: 299 SKDGGSDAG 307
K+ + G
Sbjct: 200 CKENQNSEG 208
Score = 46 (21.3 bits), Expect = 2.9e-20, Sum P(2) = 2.9e-20
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 221 SASLPSPLYPWMRSQFERKRGRQT 244
+ +L P YPWM+ E+K ++T
Sbjct: 87 AGALQPPEYPWMK---EKKAAKKT 107
>UNIPROTKB|Q0VCS4 [details] [associations]
symbol:HOXA2 "Homeobox protein Hox-A2" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
eggNOG:NOG321520 KO:K09302 HOGENOM:HOG000063664 HOVERGEN:HBG006088
OrthoDB:EOG43TZVT EMBL:BC120030 IPI:IPI00689409
RefSeq:NP_001069322.1 UniGene:Bt.111374 ProteinModelPortal:Q0VCS4
SMR:Q0VCS4 PRIDE:Q0VCS4 GeneID:524150 KEGG:bta:524150 CTD:3199
InParanoid:Q0VCS4 NextBio:20873901 Uniprot:Q0VCS4
Length = 372
Score = 215 (80.7 bits), Expect = 2.9e-20, Sum P(2) = 2.9e-20
Identities = 41/69 (59%), Positives = 51/69 (73%)
Query: 239 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
+R R YT Q LELEKEFHFN+YL R RR+EIA L LTERQ+K+WFQNRRMK K++ +
Sbjct: 140 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 199
Query: 299 SKDGGSDAG 307
K+ + G
Sbjct: 200 CKENQNSEG 208
Score = 46 (21.3 bits), Expect = 2.9e-20, Sum P(2) = 2.9e-20
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 221 SASLPSPLYPWMRSQFERKRGRQT 244
+ +L P YPWM+ E+K ++T
Sbjct: 87 AGALQPPEYPWMK---EKKAAKKT 107
>MGI|MGI:96174 [details] [associations]
symbol:Hoxa2 "homeobox A2" species:10090 "Mus musculus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0001709 "cell fate
determination" evidence=IMP] [GO:0002076 "osteoblast development"
evidence=IGI] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007379 "segment specification" evidence=IMP] [GO:0007389
"pattern specification process" evidence=IMP] [GO:0008045 "motor
neuron axon guidance" evidence=IMP] [GO:0009952 "anterior/posterior
pattern specification" evidence=IMP] [GO:0009953 "dorsal/ventral
pattern formation" evidence=IGI;IMP] [GO:0021568 "rhombomere 2
development" evidence=IMP] [GO:0021569 "rhombomere 3 development"
evidence=IGI] [GO:0021658 "rhombomere 3 morphogenesis"
evidence=IMP] [GO:0035284 "brain segmentation" evidence=IMP]
[GO:0042474 "middle ear morphogenesis" evidence=IGI;IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0045165 "cell fate commitment" evidence=IMP] [GO:0045665
"negative regulation of neuron differentiation" evidence=IGI;IMP]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0048703 "embryonic
viscerocranium morphogenesis" evidence=IMP] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IGI] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 MGI:MGI:96174 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0045944 GO:GO:0045665 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0008045 GO:GO:0002076
GO:GO:0007379 GO:GO:0009953 GO:GO:0001709 eggNOG:NOG321520
GO:GO:0035284 GO:GO:0048703 GO:GO:0042474 GO:GO:0021568
GeneTree:ENSGT00700000104446 KO:K09302 HOGENOM:HOG000063664
HOVERGEN:HBG006088 OrthoDB:EOG43TZVT CTD:3199 OMA:NCGSGLN
GO:GO:0021658 EMBL:M95599 EMBL:M93148 EMBL:M93292 EMBL:BC117105
EMBL:BC117107 EMBL:M87801 EMBL:AB039191 IPI:IPI00132242 PIR:A42694
PIR:A46037 RefSeq:NP_034581.1 UniGene:Mm.131
ProteinModelPortal:P31245 SMR:P31245 IntAct:P31245 STRING:P31245
PhosphoSite:P31245 PRIDE:P31245 Ensembl:ENSMUST00000014848
GeneID:15399 KEGG:mmu:15399 UCSC:uc009bxz.1 InParanoid:P31245
NextBio:288090 Bgee:P31245 CleanEx:MM_HOXA2 Genevestigator:P31245
GermOnline:ENSMUSG00000014704 Uniprot:P31245
Length = 372
Score = 215 (80.7 bits), Expect = 2.9e-20, Sum P(2) = 2.9e-20
Identities = 41/69 (59%), Positives = 51/69 (73%)
Query: 239 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
+R R YT Q LELEKEFHFN+YL R RR+EIA L LTERQ+K+WFQNRRMK K++ +
Sbjct: 140 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 199
Query: 299 SKDGGSDAG 307
K+ + G
Sbjct: 200 CKENQNSEG 208
Score = 46 (21.3 bits), Expect = 2.9e-20, Sum P(2) = 2.9e-20
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 221 SASLPSPLYPWMRSQFERKRGRQT 244
+ +L P YPWM+ E+K ++T
Sbjct: 89 AGALQPPEYPWMK---EKKAAKKT 109
>UNIPROTKB|E2R5Y1 [details] [associations]
symbol:HOXA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0048703
"embryonic viscerocranium morphogenesis" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0042474 "middle ear morphogenesis"
evidence=IEA] [GO:0035284 "brain segmentation" evidence=IEA]
[GO:0021658 "rhombomere 3 morphogenesis" evidence=IEA] [GO:0021568
"rhombomere 2 development" evidence=IEA] [GO:0009953
"dorsal/ventral pattern formation" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0008045 "motor neuron axon guidance" evidence=IEA] [GO:0007379
"segment specification" evidence=IEA] [GO:0002076 "osteoblast
development" evidence=IEA] [GO:0001709 "cell fate determination"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0045944 GO:GO:0045665
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0008045 GO:GO:0002076
GO:GO:0007379 GO:GO:0009953 GO:GO:0001709 GO:GO:0035284
GO:GO:0048703 GO:GO:0042474 GO:GO:0021568
GeneTree:ENSGT00700000104446 KO:K09302 CTD:3199 OMA:NCGSGLN
GO:GO:0021658 EMBL:AAEX03009390 RefSeq:XP_851905.1
Ensembl:ENSCAFT00000004713 GeneID:609592 KEGG:cfa:609592
NextBio:20895182 Uniprot:E2R5Y1
Length = 374
Score = 215 (80.7 bits), Expect = 3.1e-20, Sum P(2) = 3.1e-20
Identities = 41/69 (59%), Positives = 51/69 (73%)
Query: 239 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
+R R YT Q LELEKEFHFN+YL R RR+EIA L LTERQ+K+WFQNRRMK K++ +
Sbjct: 142 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 201
Query: 299 SKDGGSDAG 307
K+ + G
Sbjct: 202 CKENQNSEG 210
Score = 46 (21.3 bits), Expect = 3.1e-20, Sum P(2) = 3.1e-20
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 221 SASLPSPLYPWMRSQFERKRGRQT 244
+ +L P YPWM+ E+K ++T
Sbjct: 87 AGALQPPEYPWMK---EKKAAKKT 107
>UNIPROTKB|O43364 [details] [associations]
symbol:HOXA2 "Homeobox protein Hox-A2" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0001709 "cell fate determination" evidence=IEA] [GO:0002076
"osteoblast development" evidence=IEA] [GO:0007379 "segment
specification" evidence=IEA] [GO:0008045 "motor neuron axon
guidance" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0009953 "dorsal/ventral pattern
formation" evidence=IEA] [GO:0021568 "rhombomere 2 development"
evidence=IEA] [GO:0021658 "rhombomere 3 morphogenesis"
evidence=IEA] [GO:0035284 "brain segmentation" evidence=IEA]
[GO:0042474 "middle ear morphogenesis" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045665 "negative
regulation of neuron differentiation" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0048703 "embryonic viscerocranium
morphogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0009952 EMBL:CH471073
GO:GO:0043565 GO:GO:0045944 GO:GO:0045665 GO:GO:0003700
GO:GO:0006351 EMBL:CH236948 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0008045
GO:GO:0002076 GO:GO:0007379 GO:GO:0009953 GO:GO:0001709
eggNOG:NOG321520 GO:GO:0035284 GO:GO:0048703 GO:GO:0042474
GO:GO:0021568 KO:K09302 EMBL:AC004079 HOGENOM:HOG000063664
HOVERGEN:HBG006088 OrthoDB:EOG43TZVT CTD:3199 EMBL:BC130571
EMBL:BC136500 IPI:IPI00012049 RefSeq:NP_006726.1 UniGene:Hs.445239
UniGene:Hs.592177 ProteinModelPortal:O43364 SMR:O43364
STRING:O43364 PhosphoSite:O43364 PRIDE:O43364
Ensembl:ENST00000222718 GeneID:3199 KEGG:hsa:3199 UCSC:uc003syh.3
GeneCards:GC07M027106 HGNC:HGNC:5103 HPA:HPA029774 MIM:604685
MIM:612290 neXtProt:NX_O43364 Orphanet:93976 Orphanet:140963
PharmGKB:PA29380 InParanoid:O43364 OMA:NCGSGLN PhylomeDB:O43364
GenomeRNAi:3199 NextBio:12724 Bgee:O43364 CleanEx:HS_HOXA2
Genevestigator:O43364 GermOnline:ENSG00000105996 GO:GO:0021658
Uniprot:O43364
Length = 376
Score = 215 (80.7 bits), Expect = 3.2e-20, Sum P(2) = 3.2e-20
Identities = 41/69 (59%), Positives = 51/69 (73%)
Query: 239 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
+R R YT Q LELEKEFHFN+YL R RR+EIA L LTERQ+K+WFQNRRMK K++ +
Sbjct: 144 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 203
Query: 299 SKDGGSDAG 307
K+ + G
Sbjct: 204 CKENQNSEG 212
Score = 46 (21.3 bits), Expect = 3.2e-20, Sum P(2) = 3.2e-20
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 221 SASLPSPLYPWMRSQFERKRGRQT 244
+ +L P YPWM+ E+K ++T
Sbjct: 87 AGALQPPEYPWMK---EKKAAKKT 107
>UNIPROTKB|F1SHT0 [details] [associations]
symbol:HOXA2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048703 "embryonic
viscerocranium morphogenesis" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0042474 "middle ear morphogenesis"
evidence=IEA] [GO:0035284 "brain segmentation" evidence=IEA]
[GO:0021658 "rhombomere 3 morphogenesis" evidence=IEA] [GO:0021568
"rhombomere 2 development" evidence=IEA] [GO:0009953
"dorsal/ventral pattern formation" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0008045 "motor neuron axon guidance" evidence=IEA] [GO:0007379
"segment specification" evidence=IEA] [GO:0002076 "osteoblast
development" evidence=IEA] [GO:0001709 "cell fate determination"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0045944 GO:GO:0045665
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0008045 GO:GO:0002076
GO:GO:0007379 GO:GO:0009953 GO:GO:0001709 GO:GO:0035284
GO:GO:0048703 GO:GO:0042474 GO:GO:0021568
GeneTree:ENSGT00700000104446 KO:K09302 OMA:NCGSGLN GO:GO:0021658
EMBL:CU570959 RefSeq:XP_003134891.1 Ensembl:ENSSSCT00000018187
GeneID:100519993 KEGG:ssc:100519993 Uniprot:F1SHT0
Length = 380
Score = 215 (80.7 bits), Expect = 3.5e-20, Sum P(2) = 3.5e-20
Identities = 41/69 (59%), Positives = 51/69 (73%)
Query: 239 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
+R R YT Q LELEKEFHFN+YL R RR+EIA L LTERQ+K+WFQNRRMK K++ +
Sbjct: 148 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 207
Query: 299 SKDGGSDAG 307
K+ + G
Sbjct: 208 CKENQNSEG 216
Score = 46 (21.3 bits), Expect = 3.5e-20, Sum P(2) = 3.5e-20
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 221 SASLPSPLYPWMRSQFERKRGRQT 244
+ +L P YPWM+ E+K ++T
Sbjct: 87 AGALQPPEYPWMK---EKKAAKKT 107
>UNIPROTKB|F1RSV7 [details] [associations]
symbol:F1RSV7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00700000104446
EMBL:CU861636 Ensembl:ENSSSCT00000010205 OMA:RMKWRER Uniprot:F1RSV7
Length = 283
Score = 217 (81.4 bits), Expect = 3.6e-20, Sum P(2) = 3.6e-20
Identities = 48/79 (60%), Positives = 56/79 (70%)
Query: 237 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
E KR R YTR Q LELEKEF FN+Y++R RR+E+A L LTER IKIWF NRRMKWKKE
Sbjct: 146 ENKRTRTAYTRAQLLELEKEFLFNKYISRPRRVELAVMLNLTERHIKIWF-NRRMKWKKE 204
Query: 297 -NKSKDGGSDA--GSDITP 312
+K + G+ A G D P
Sbjct: 205 EDKKRSCGTVAAGGGDAEP 223
Score = 36 (17.7 bits), Expect = 3.6e-20, Sum P(2) = 3.6e-20
Identities = 5/8 (62%), Positives = 7/8 (87%)
Query: 227 PLYPWMRS 234
P +PWM+S
Sbjct: 118 PPFPWMKS 125
>RGD|2813 [details] [associations]
symbol:Hoxa2 "homeo box A2" species:10116 "Rattus norvegicus"
[GO:0000122 "negative regulation of transcription from RNA polymerase
II promoter" evidence=ISO] [GO:0001709 "cell fate determination"
evidence=ISO] [GO:0002076 "osteoblast development" evidence=ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;TAS] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007379
"segment specification" evidence=ISO] [GO:0007389 "pattern
specification process" evidence=ISO] [GO:0008045 "motor neuron axon
guidance" evidence=ISO] [GO:0009952 "anterior/posterior pattern
specification" evidence=ISO] [GO:0009953 "dorsal/ventral pattern
formation" evidence=ISO] [GO:0021568 "rhombomere 2 development"
evidence=ISO] [GO:0021569 "rhombomere 3 development" evidence=ISO]
[GO:0021658 "rhombomere 3 morphogenesis" evidence=ISO] [GO:0035284
"brain segmentation" evidence=ISO] [GO:0042474 "middle ear
morphogenesis" evidence=ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA;ISO] [GO:0045165 "cell fate commitment"
evidence=ISO] [GO:0045665 "negative regulation of neuron
differentiation" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0048703 "embryonic viscerocranium morphogenesis" evidence=ISO]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
RGD:2813 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0045944
GO:GO:0045665 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122
GO:GO:0008045 GO:GO:0002076 GO:GO:0007379 GO:GO:0009953 GO:GO:0001709
eggNOG:NOG321520 GO:GO:0035284 GO:GO:0048703 GO:GO:0042474
GO:GO:0021568 KO:K09302 HOGENOM:HOG000063664 HOVERGEN:HBG006088
OrthoDB:EOG43TZVT CTD:3199 GO:GO:0021658 EMBL:M91802 IPI:IPI00210902
PIR:I52196 RefSeq:NP_036713.2 UniGene:Rn.91077
ProteinModelPortal:P31246 SMR:P31246 STRING:P31246 GeneID:24452
KEGG:rno:24452 UCSC:RGD:2813 InParanoid:P31246 NextBio:603363
Genevestigator:P31246 GermOnline:ENSRNOG00000005968 Uniprot:P31246
Length = 372
Score = 215 (80.7 bits), Expect = 3.7e-20, Sum P(2) = 3.7e-20
Identities = 41/69 (59%), Positives = 51/69 (73%)
Query: 239 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
+R R YT Q LELEKEFHFN+YL R RR+EIA L LTERQ+K+WFQNRRMK K++ +
Sbjct: 140 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 199
Query: 299 SKDGGSDAG 307
K+ + G
Sbjct: 200 CKENQNSEG 208
Score = 45 (20.9 bits), Expect = 3.7e-20, Sum P(2) = 3.7e-20
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 223 SLPSPLYPWMRSQFERKRGRQT 244
+L P YPWM+ E+K ++T
Sbjct: 91 ALQPPEYPWMK---EKKAAKKT 109
>UNIPROTKB|P31246 [details] [associations]
symbol:Hoxa2 "Homeobox protein Hox-A2" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 RGD:2813 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565
GO:GO:0045944 GO:GO:0045665 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000122 GO:GO:0008045 GO:GO:0002076 GO:GO:0007379
GO:GO:0009953 GO:GO:0001709 eggNOG:NOG321520 GO:GO:0035284
GO:GO:0048703 GO:GO:0042474 GO:GO:0021568 KO:K09302
HOGENOM:HOG000063664 HOVERGEN:HBG006088 OrthoDB:EOG43TZVT CTD:3199
GO:GO:0021658 EMBL:M91802 IPI:IPI00210902 PIR:I52196
RefSeq:NP_036713.2 UniGene:Rn.91077 ProteinModelPortal:P31246
SMR:P31246 STRING:P31246 GeneID:24452 KEGG:rno:24452 UCSC:RGD:2813
InParanoid:P31246 NextBio:603363 Genevestigator:P31246
GermOnline:ENSRNOG00000005968 Uniprot:P31246
Length = 372
Score = 215 (80.7 bits), Expect = 3.7e-20, Sum P(2) = 3.7e-20
Identities = 41/69 (59%), Positives = 51/69 (73%)
Query: 239 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
+R R YT Q LELEKEFHFN+YL R RR+EIA L LTERQ+K+WFQNRRMK K++ +
Sbjct: 140 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 199
Query: 299 SKDGGSDAG 307
K+ + G
Sbjct: 200 CKENQNSEG 208
Score = 45 (20.9 bits), Expect = 3.7e-20, Sum P(2) = 3.7e-20
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 223 SLPSPLYPWMRSQFERKRGRQT 244
+L P YPWM+ E+K ++T
Sbjct: 91 ALQPPEYPWMK---EKKAAKKT 109
>UNIPROTKB|O93353 [details] [associations]
symbol:HOXA3 "Homeobox protein Hox-A3" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001525
"angiogenesis" evidence=IEA] [GO:0001974 "blood vessel remodeling"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0010159 "specification of
organ position" evidence=IEA] [GO:0021615 "glossopharyngeal nerve
morphogenesis" evidence=IEA] [GO:0030878 "thyroid gland
development" evidence=IEA] [GO:0048538 "thymus development"
evidence=IEA] [GO:0048645 "organ formation" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
[GO:0051216 "cartilage development" evidence=IEA] [GO:0060017
"parathyroid gland development" evidence=IEA] [GO:0071837 "HMG box
domain binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104189 eggNOG:NOG284589 HOGENOM:HOG000252944
HOVERGEN:HBG107984 KO:K09303 OrthoDB:EOG4K6G4J InterPro:IPR025281
Pfam:PF13293 CTD:3200 EMBL:AF067959 EMBL:AB111110 IPI:IPI00571086
RefSeq:NP_989879.1 RefSeq:XP_003640749.1 UniGene:Gga.48467
UniGene:Gga.49158 ProteinModelPortal:O93353 SMR:O93353
Ensembl:ENSGALT00000018005 GeneID:100858480 GeneID:395231
KEGG:gga:100858480 KEGG:gga:395231 InParanoid:O93353
NextBio:20815320 Uniprot:O93353
Length = 413
Score = 242 (90.2 bits), Expect = 4.2e-20, P = 4.2e-20
Identities = 49/82 (59%), Positives = 59/82 (71%)
Query: 235 QFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWK 294
Q KR R YT Q +ELEKEFHFNRYL R RR+E+A+ L LTERQIKIWFQNRRMK+K
Sbjct: 170 QTSSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYK 229
Query: 295 KENKSKDGGSDAGSDITPATSP 316
K+ K K + +G +P+ SP
Sbjct: 230 KDQKGKGMMTSSGGQ-SPSRSP 250
>UNIPROTKB|P52945 [details] [associations]
symbol:PDX1 "Pancreas/duodenum homeobox protein 1"
species:9606 "Homo sapiens" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0001046 "core promoter sequence-specific DNA binding"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0006006 "glucose
metabolic process" evidence=IEA] [GO:0006366 "transcription from
RNA polymerase II promoter" evidence=IEA] [GO:0007224 "smoothened
signaling pathway" evidence=IEA] [GO:0007417 "central nervous
system development" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0008285 "negative regulation of
cell proliferation" evidence=IEA] [GO:0009611 "response to
wounding" evidence=IEA] [GO:0010157 "response to chlorate"
evidence=IEA] [GO:0010260 "organ senescence" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0016331 "morphogenesis of embryonic epithelium" evidence=IEA]
[GO:0031017 "exocrine pancreas development" evidence=IEA]
[GO:0031100 "organ regeneration" evidence=IEA] [GO:0032024
"positive regulation of insulin secretion" evidence=IEA]
[GO:0032403 "protein complex binding" evidence=IEA] [GO:0033273
"response to vitamin" evidence=IEA] [GO:0034097 "response to
cytokine stimulus" evidence=IEA] [GO:0035094 "response to nicotine"
evidence=IEA] [GO:0042493 "response to drug" evidence=IEA]
[GO:0042593 "glucose homeostasis" evidence=IEA] [GO:0043201
"response to leucine" evidence=IEA] [GO:0043388 "positive
regulation of DNA binding" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0048565 "digestive
tract development" evidence=IEA] [GO:0048863 "stem cell
differentiation" evidence=IEA] [GO:0051384 "response to
glucocorticoid stimulus" evidence=IEA] [GO:0060290
"transdifferentiation" evidence=IEA] [GO:0070542 "response to fatty
acid" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0006091 "generation of precursor
metabolites and energy" evidence=TAS] [GO:0009887 "organ
morphogenesis" evidence=TAS] [GO:0031018 "endocrine pancreas
development" evidence=TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=TAS] [GO:0007263
"nitric oxide mediated signal transduction" evidence=IDA]
[GO:0030073 "insulin secretion" evidence=IDA] [GO:0051594
"detection of glucose" evidence=ISS] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0003309 "type B pancreatic cell differentiation"
evidence=ISS;IDA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0005829 GO:GO:0005634 Reactome:REACT_111045 GO:GO:0008285
GO:GO:0008284 EMBL:CH471075 GO:GO:0043565 GO:GO:0045944
GO:GO:0001889 GO:GO:0003700 GO:GO:0003682 GO:GO:0042593
GO:GO:0006006 GO:GO:0006091 Orphanet:552 Orphanet:99885
Pathway_Interaction_DB:hnf3bpathway Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122
GO:GO:0009887 GO:GO:0006366 MIM:125853 GO:GO:0007263 GO:GO:0016331
GO:GO:0048565 GO:GO:0030073 GO:GO:0031017 GO:GO:0003309
GO:GO:0051594 CleanEx:HS_PDX1 EMBL:U35632 EMBL:S82178 EMBL:S82168
EMBL:U30329 EMBL:X99894 EMBL:AF035260 EMBL:AF035259 EMBL:AF049893
EMBL:AL353195 IPI:IPI00006036 PIR:G01926 RefSeq:NP_000200.1
UniGene:Hs.32938 ProteinModelPortal:P52945 SMR:P52945 STRING:P52945
PhosphoSite:P52945 DMDM:1708540 PRIDE:P52945 DNASU:3651
Ensembl:ENST00000381033 GeneID:3651 KEGG:hsa:3651 UCSC:uc001urt.2
CTD:3651 GeneCards:GC13P028494 HGNC:HGNC:6107 HPA:CAB025873
MIM:260370 MIM:600733 MIM:606392 neXtProt:NX_P52945 Orphanet:2805
PharmGKB:PA162399173 eggNOG:NOG271681 HOGENOM:HOG000115484
HOVERGEN:HBG004525 InParanoid:P52945 KO:K07594 OMA:PYEVPPI
OrthoDB:EOG4M0F2P PhylomeDB:P52945 GenomeRNAi:3651 NextBio:14279
Bgee:P52945 Genevestigator:P52945 GermOnline:ENSG00000139515
Uniprot:P52945
Length = 283
Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 47/70 (67%), Positives = 52/70 (74%)
Query: 237 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
E KR R YTR Q LELEKEF FN+Y++R RR+E+A L LTER IKIWFQNRRMKWKKE
Sbjct: 145 ENKRTRTAYTRAQLLELEKEFLFNKYISRPRRVELAVMLNLTERHIKIWFQNRRMKWKKE 204
Query: 297 NKSKDGGSDA 306
K GG A
Sbjct: 205 EDKKRGGGTA 214
>ZFIN|ZDB-GENE-990415-122 [details] [associations]
symbol:pdx1 "pancreatic and duodenal homeobox 1"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0031018 "endocrine pancreas development"
evidence=IMP] [GO:0035469 "determination of pancreatic left/right
asymmetry" evidence=IMP] [GO:0031016 "pancreas development"
evidence=IMP] [GO:0071910 "determination of liver left/right
asymmetry" evidence=IMP] [GO:0071907 "determination of digestive
tract left/right asymmetry" evidence=IMP] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-990415-122 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0031018 GO:GO:0071907 CTD:3651
HOVERGEN:HBG004525 KO:K07594 GO:GO:0035469 GO:GO:0071910
EMBL:BC078192 IPI:IPI00510470 RefSeq:NP_571518.2 UniGene:Dr.75810
ProteinModelPortal:Q6DC85 SMR:Q6DC85 STRING:Q6DC85 DNASU:30721
GeneID:30721 KEGG:dre:30721 InParanoid:Q6DC85 NextBio:20807070
ArrayExpress:Q6DC85 Uniprot:Q6DC85
Length = 246
Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 49/81 (60%), Positives = 57/81 (70%)
Query: 230 PWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNR 289
P+M E KR R YTR Q LELEKEF FN+Y++R RR+E+A L LTER IKIWFQNR
Sbjct: 129 PYMVEAEENKRTRTAYTRAQLLELEKEFLFNKYISRPRRVELALTLSLTERHIKIWFQNR 188
Query: 290 RMKWKKE-NKSKDGGSDAGSD 309
RMKWKKE +K + G D D
Sbjct: 189 RMKWKKEEDKRRARGVDPEQD 209
>UNIPROTKB|Q90Z54 [details] [associations]
symbol:CDXB "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR006820
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF04731
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 HSSP:P02833
GeneTree:ENSGT00530000063388 GO:GO:0000976 eggNOG:NOG291290
KO:K09312 HOGENOM:HOG000115975 HOVERGEN:HBG005302 CTD:1046
EMBL:AADN02013531 EMBL:AADN02013532 EMBL:AF353624 IPI:IPI00575574
RefSeq:NP_989945.1 UniGene:Gga.49855 SMR:Q90Z54
Ensembl:ENSGALT00000012401 GeneID:395320 KEGG:gga:395320
InParanoid:Q90Z54 OMA:YHHVPNM NextBio:20815405 Uniprot:Q90Z54
Length = 263
Score = 186 (70.5 bits), Expect = 4.5e-20, Sum P(2) = 4.5e-20
Identities = 44/84 (52%), Positives = 56/84 (66%)
Query: 238 RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 297
+++ R YT +Q LELEKEFH NRY+T RR+ E+A L L+ERQ+KIWFQNRR K +K
Sbjct: 152 KEKYRVVYTDHQRLELEKEFHCNRYITIRRKSELAANLGLSERQVKIWFQNRRAKERKII 211
Query: 298 KSK----DG-GSDAGSDITPATSP 316
K K DG G SD + + SP
Sbjct: 212 KKKISQFDGSGGSVQSD-SGSLSP 234
Score = 66 (28.3 bits), Expect = 4.5e-20, Sum P(2) = 4.5e-20
Identities = 33/113 (29%), Positives = 41/113 (36%)
Query: 34 LPQNNGVEDPSMYDPRQVHHYGQVPNNGQPVHGMPYPRFPPYDRMDIRNAAYYGAHEGGM 93
LP N V P D HH ++GQP G P + P R D NA YG G
Sbjct: 25 LPVQNFVPAPPYSDYMGYHHVPAPDSHGQPA-GAWGPHYGP-QREDW-NA--YGPCPGPS 79
Query: 94 EQYPRPDSPSMGHMGPQNGHQTPVVYASCKLQAAVGNGIIPGPESPNDLVDPT 146
+ + P G +P Y+S L A G+ P V PT
Sbjct: 80 GTAA---AAQLSGSSPGQGSYSPAEYSS--LHPAAPGGLPPAGTVGTQQVSPT 127
>ZFIN|ZDB-GENE-980526-532 [details] [associations]
symbol:hoxc3a "homeo box C3a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-980526-532
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104161 HOGENOM:HOG000252944 EMBL:BX005254
EMBL:BC095299 EMBL:BC165158 IPI:IPI00931602 UniGene:Dr.132202
UniGene:Dr.510 SMR:Q503K0 Ensembl:ENSDART00000082472
HOVERGEN:HBG096057 InParanoid:Q503K0 Uniprot:Q503K0
Length = 254
Score = 214 (80.4 bits), Expect = 5.8e-20, Sum P(2) = 5.8e-20
Identities = 41/62 (66%), Positives = 49/62 (79%)
Query: 239 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 298
KR R +T Q LELEKEFHF+ YL R RR+E+A L LT+RQIKIWFQNRRMK+KK++K
Sbjct: 150 KRARVAFTSSQLLELEKEFHFSAYLCRNRRLEMAELLKLTDRQIKIWFQNRRMKYKKDHK 209
Query: 299 SK 300
K
Sbjct: 210 EK 211
Score = 37 (18.1 bits), Expect = 5.8e-20, Sum P(2) = 5.8e-20
Identities = 6/14 (42%), Positives = 10/14 (71%)
Query: 220 TSASLPSPLYPWMR 233
+++ L + YPWMR
Sbjct: 103 STSCLSTMKYPWMR 116
>UNIPROTKB|G3N0G1 [details] [associations]
symbol:HOXA10 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0030326 "embryonic limb morphogenesis" evidence=IEA]
[GO:0009954 "proximal/distal pattern formation" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0001501 "skeletal system development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0009952 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0030326 GO:GO:0001501
GO:GO:0009954 GeneTree:ENSGT00700000104054 EMBL:DAAA02010938
EMBL:DAAA02010937 Ensembl:ENSBTAT00000063132 OMA:XPQATSC
Uniprot:G3N0G1
Length = 398
Score = 219 (82.2 bits), Expect = 5.9e-20, Sum P(2) = 5.9e-20
Identities = 42/68 (61%), Positives = 55/68 (80%)
Query: 231 WMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRR 290
W+ ++ RK+ R YT++QTLELEKEF FN YLTR RR+EI+ ++ LT+RQ+KIWFQNRR
Sbjct: 318 WLTAKSGRKK-RCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRR 376
Query: 291 MKWKKENK 298
MK KK N+
Sbjct: 377 MKLKKMNR 384
Score = 41 (19.5 bits), Expect = 5.9e-20, Sum P(2) = 5.9e-20
Identities = 19/77 (24%), Positives = 29/77 (37%)
Query: 68 PYPRFPPYDRMDIRNAAYYGAHEGGMEQYPRPDSPSMGHMGPQNGHQTPVVYASCKLQAA 127
P+PR PP D + ++ G G + + + G+ G G P + A
Sbjct: 176 PFPRGPPPDGCTLGTSS--GVPVPGYFRLSQAYGTTKGYGGGGGG--APQLGAGPFPAQP 231
Query: 128 VGNGIIPGPESPNDLVD 144
G G P P + VD
Sbjct: 232 PGRGFDPPPALASSSVD 248
>UNIPROTKB|Q08DG7 [details] [associations]
symbol:HOXA3 "Homeobox protein Hox-A3" species:9913 "Bos
taurus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0071837 "HMG box domain binding" evidence=IEA] [GO:0060017
"parathyroid gland development" evidence=IEA] [GO:0051216
"cartilage development" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0048645 "organ
formation" evidence=IEA] [GO:0048538 "thymus development"
evidence=IEA] [GO:0030878 "thyroid gland development" evidence=IEA]
[GO:0021615 "glossopharyngeal nerve morphogenesis" evidence=IEA]
[GO:0010159 "specification of organ position" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0001974 "blood vessel remodeling"
evidence=IEA] [GO:0001525 "angiogenesis" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0009952 GO:GO:0008284
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0001525
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0001974 GO:GO:0051216 GO:GO:0048538 GO:GO:0048645
GO:GO:0048704 GO:GO:0010159 GO:GO:0060017 GO:GO:0030878
GeneTree:ENSGT00700000104189 eggNOG:NOG284589 HOGENOM:HOG000252944
HOVERGEN:HBG107984 KO:K09303 OMA:HIQGSPV OrthoDB:EOG4K6G4J
InterPro:IPR025281 Pfam:PF13293 EMBL:BC123759 IPI:IPI00693889
RefSeq:NP_001070293.1 UniGene:Bt.87350 ProteinModelPortal:Q08DG7
SMR:Q08DG7 PRIDE:Q08DG7 Ensembl:ENSBTAT00000010700 GeneID:509991
KEGG:bta:509991 CTD:3200 InParanoid:Q08DG7 NextBio:20869233
GO:GO:0021615 Uniprot:Q08DG7
Length = 442
Score = 241 (89.9 bits), Expect = 7.4e-20, P = 7.4e-20
Identities = 49/82 (59%), Positives = 59/82 (71%)
Query: 235 QFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWK 294
Q KR R YT Q +ELEKEFHFNRYL R RR+E+A+ L LTERQIKIWFQNRRMK+K
Sbjct: 188 QASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYK 247
Query: 295 KENKSKDGGSDAGSDITPATSP 316
K+ K K + +G +P+ SP
Sbjct: 248 KDQKGKGMLTSSGGQ-SPSRSP 268
>UNIPROTKB|J9NWE8 [details] [associations]
symbol:HOXA3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104189 KO:K09303 OMA:HIQGSPV
InterPro:IPR025281 Pfam:PF13293 CTD:3200 EMBL:AAEX03009390
RefSeq:XP_864544.1 Ensembl:ENSCAFT00000046660 GeneID:482368
KEGG:cfa:482368 Uniprot:J9NWE8
Length = 442
Score = 241 (89.9 bits), Expect = 7.4e-20, P = 7.4e-20
Identities = 49/82 (59%), Positives = 59/82 (71%)
Query: 235 QFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWK 294
Q KR R YT Q +ELEKEFHFNRYL R RR+E+A+ L LTERQIKIWFQNRRMK+K
Sbjct: 189 QASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYK 248
Query: 295 KENKSKDGGSDAGSDITPATSP 316
K+ K K + +G +P+ SP
Sbjct: 249 KDQKGKGMLTSSGGQ-SPSRSP 269
>UNIPROTKB|O43365 [details] [associations]
symbol:HOXA3 "Homeobox protein Hox-A3" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0010159 "specification of organ position"
evidence=IEA] [GO:0021615 "glossopharyngeal nerve morphogenesis"
evidence=IEA] [GO:0030878 "thyroid gland development" evidence=IEA]
[GO:0048538 "thymus development" evidence=IEA] [GO:0048645 "organ
formation" evidence=IEA] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IEA] [GO:0051216 "cartilage development"
evidence=IEA] [GO:0060017 "parathyroid gland development"
evidence=IEA] [GO:0071837 "HMG box domain binding" evidence=IEA]
[GO:0001974 "blood vessel remodeling" evidence=IEA] [GO:0008284
"positive regulation of cell proliferation" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0001525 "angiogenesis" evidence=IEP] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0008284 EMBL:CH471073 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 GO:GO:0001525 EMBL:CH236948 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0001974
GO:GO:0051216 GO:GO:0048538 GO:GO:0048645 GO:GO:0048704
GO:GO:0010159 GO:GO:0060017 GO:GO:0030878 eggNOG:NOG284589
EMBL:AC004079 HOGENOM:HOG000252944 HOVERGEN:HBG107984 KO:K09303
OMA:HIQGSPV OrthoDB:EOG4K6G4J InterPro:IPR025281 Pfam:PF13293
CTD:3200 GO:GO:0021615 EMBL:BC015180 IPI:IPI00012050
RefSeq:NP_109377.1 RefSeq:NP_705895.1 UniGene:Hs.659337
ProteinModelPortal:O43365 SMR:O43365 STRING:O43365
PhosphoSite:O43365 PaxDb:O43365 PRIDE:O43365 DNASU:3200
Ensembl:ENST00000317201 Ensembl:ENST00000396352 GeneID:3200
KEGG:hsa:3200 UCSC:uc003syk.3 GeneCards:GC07M027113 HGNC:HGNC:5104
HPA:HPA029157 MIM:142954 neXtProt:NX_O43365 PharmGKB:PA29381
InParanoid:O43365 PhylomeDB:O43365 GenomeRNAi:3200 NextBio:12728
ArrayExpress:O43365 Bgee:O43365 CleanEx:HS_HOXA3
Genevestigator:O43365 GermOnline:ENSG00000105997 Uniprot:O43365
Length = 443
Score = 241 (89.9 bits), Expect = 7.4e-20, P = 7.4e-20
Identities = 49/82 (59%), Positives = 59/82 (71%)
Query: 235 QFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWK 294
Q KR R YT Q +ELEKEFHFNRYL R RR+E+A+ L LTERQIKIWFQNRRMK+K
Sbjct: 188 QASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYK 247
Query: 295 KENKSKDGGSDAGSDITPATSP 316
K+ K K + +G +P+ SP
Sbjct: 248 KDQKGKGMLTSSGGQ-SPSRSP 268
>UNIPROTKB|F1SHT1 [details] [associations]
symbol:HOXA3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0071837 "HMG box
domain binding" evidence=IEA] [GO:0060017 "parathyroid gland
development" evidence=IEA] [GO:0051216 "cartilage development"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA] [GO:0048645 "organ formation" evidence=IEA]
[GO:0048538 "thymus development" evidence=IEA] [GO:0030878 "thyroid
gland development" evidence=IEA] [GO:0021615 "glossopharyngeal
nerve morphogenesis" evidence=IEA] [GO:0010159 "specification of
organ position" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0001974 "blood
vessel remodeling" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0009952 GO:GO:0008284
GO:GO:0043565 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0001974
GO:GO:0051216 GO:GO:0048538 GO:GO:0048645 GO:GO:0048704
GO:GO:0010159 GO:GO:0060017 GO:GO:0030878
GeneTree:ENSGT00700000104189 KO:K09303 OMA:HIQGSPV
InterPro:IPR025281 Pfam:PF13293 CTD:3200 GO:GO:0021615
EMBL:CU570959 RefSeq:XP_003134890.1 Ensembl:ENSSSCT00000018186
GeneID:100519809 KEGG:ssc:100519809 Uniprot:F1SHT1
Length = 443
Score = 241 (89.9 bits), Expect = 7.4e-20, P = 7.4e-20
Identities = 49/82 (59%), Positives = 59/82 (71%)
Query: 235 QFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWK 294
Q KR R YT Q +ELEKEFHFNRYL R RR+E+A+ L LTERQIKIWFQNRRMK+K
Sbjct: 188 QASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYK 247
Query: 295 KENKSKDGGSDAGSDITPATSP 316
K+ K K + +G +P+ SP
Sbjct: 248 KDQKGKGMLTSSGGQ-SPSRSP 268
>MGI|MGI:96175 [details] [associations]
symbol:Hoxa3 "homeobox A3" species:10090 "Mus musculus"
[GO:0001974 "blood vessel remodeling" evidence=IMP] [GO:0003677
"DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IMP] [GO:0009887 "organ morphogenesis"
evidence=IMP] [GO:0009952 "anterior/posterior pattern
specification" evidence=IGI] [GO:0010159 "specification of organ
position" evidence=IGI] [GO:0021615 "glossopharyngeal nerve
morphogenesis" evidence=IGI;IMP] [GO:0030878 "thyroid gland
development" evidence=IGI;IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0048538 "thymus development"
evidence=IGI;IMP] [GO:0048645 "organ formation" evidence=IMP]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IGI]
[GO:0048706 "embryonic skeletal system development" evidence=IGI]
[GO:0051216 "cartilage development" evidence=IGI] [GO:0060017
"parathyroid gland development" evidence=IGI] [GO:0071837 "HMG box
domain binding" evidence=IPI] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 MGI:MGI:96175
GO:GO:0005634 GO:GO:0009952 GO:GO:0008284 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 GO:GO:0001525 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0001974
GO:GO:0051216 GO:GO:0048538 GO:GO:0048645 GO:GO:0048704
GO:GO:0010159 GO:GO:0060017 GO:GO:0030878
GeneTree:ENSGT00700000104189 eggNOG:NOG284589 HOGENOM:HOG000252944
HOVERGEN:HBG107984 KO:K09303 OMA:HIQGSPV OrthoDB:EOG4K6G4J
InterPro:IPR025281 Pfam:PF13293 CTD:3200 GO:GO:0021615 EMBL:Y11717
EMBL:BC096612 EMBL:U56399 EMBL:K02591 IPI:IPI00113737 PIR:I49746
RefSeq:NP_034582.1 UniGene:Mm.159945 UniGene:Mm.483277
ProteinModelPortal:P02831 SMR:P02831 STRING:P02831
PhosphoSite:P02831 PRIDE:P02831 Ensembl:ENSMUST00000114434
GeneID:15400 KEGG:mmu:15400 UCSC:uc009bya.2 InParanoid:P02831
NextBio:288094 Bgee:P02831 CleanEx:MM_HOXA3 Genevestigator:P02831
GermOnline:ENSMUSG00000059723 Uniprot:P02831
Length = 443
Score = 241 (89.9 bits), Expect = 7.4e-20, P = 7.4e-20
Identities = 49/82 (59%), Positives = 59/82 (71%)
Query: 235 QFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWK 294
Q KR R YT Q +ELEKEFHFNRYL R RR+E+A+ L LTERQIKIWFQNRRMK+K
Sbjct: 189 QASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYK 248
Query: 295 KENKSKDGGSDAGSDITPATSP 316
K+ K K + +G +P+ SP
Sbjct: 249 KDQKGKGMLTSSGGQ-SPSRSP 269
>RGD|1561431 [details] [associations]
symbol:Hoxa3 "homeobox A3" species:10116 "Rattus norvegicus"
[GO:0001525 "angiogenesis" evidence=ISO] [GO:0001974 "blood vessel
remodeling" evidence=ISO] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=ISO] [GO:0009887 "organ morphogenesis"
evidence=ISO] [GO:0009952 "anterior/posterior pattern
specification" evidence=ISO] [GO:0010159 "specification of organ
position" evidence=ISO] [GO:0021615 "glossopharyngeal nerve
morphogenesis" evidence=ISO] [GO:0030878 "thyroid gland
development" evidence=ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0048538 "thymus development"
evidence=ISO] [GO:0048645 "organ formation" evidence=ISO]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=ISO]
[GO:0048706 "embryonic skeletal system development" evidence=ISO]
[GO:0051216 "cartilage development" evidence=ISO] [GO:0060017
"parathyroid gland development" evidence=ISO] [GO:0071837 "HMG box
domain binding" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 RGD:1561431 GO:GO:0005634
GO:GO:0009952 GO:GO:0008284 GO:GO:0043565 GO:GO:0003700
GO:GO:0001525 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0001974 GO:GO:0051216 GO:GO:0048538
GO:GO:0048645 GO:GO:0048704 GO:GO:0010159 GO:GO:0060017
GO:GO:0030878 GeneTree:ENSGT00700000104189 KO:K09303 OMA:HIQGSPV
OrthoDB:EOG4K6G4J InterPro:IPR025281 Pfam:PF13293 CTD:3200
GO:GO:0021615 EMBL:CH474011 EMBL:AC122669 IPI:IPI00187912
RefSeq:XP_001058923.1 RefSeq:XP_003749795.1 RefSeq:XP_003752226.1
Ensembl:ENSRNOT00000008447 GeneID:100911474 GeneID:500125
KEGG:rno:100911474 KEGG:rno:500125 UCSC:RGD:1561431 NextBio:705172
Uniprot:D3ZM81
Length = 444
Score = 241 (89.9 bits), Expect = 7.5e-20, P = 7.5e-20
Identities = 49/82 (59%), Positives = 59/82 (71%)
Query: 235 QFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWK 294
Q KR R YT Q +ELEKEFHFNRYL R RR+E+A+ L LTERQIKIWFQNRRMK+K
Sbjct: 189 QASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYK 248
Query: 295 KENKSKDGGSDAGSDITPATSP 316
K+ K K + +G +P+ SP
Sbjct: 249 KDQKGKGMLTSSGGQ-SPSRSP 269
>UNIPROTKB|E2R5Z1 [details] [associations]
symbol:HOXA1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0090103
"cochlea morphogenesis" evidence=IEA] [GO:0060876 "semicircular
canal formation" evidence=IEA] [GO:0050905 "neuromuscular process"
evidence=IEA] [GO:0050890 "cognition" evidence=IEA] [GO:0050795
"regulation of behavior" evidence=IEA] [GO:0048844 "artery
morphogenesis" evidence=IEA] [GO:0048702 "embryonic neurocranium
morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0042473 "outer ear morphogenesis" evidence=IEA] [GO:0021953
"central nervous system neuron differentiation" evidence=IEA]
[GO:0021754 "facial nucleus development" evidence=IEA] [GO:0021612
"facial nerve structural organization" evidence=IEA] [GO:0021599
"abducens nerve formation" evidence=IEA] [GO:0021571 "rhombomere 5
development" evidence=IEA] [GO:0021570 "rhombomere 4 development"
evidence=IEA] [GO:0021569 "rhombomere 3 development" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0007634 "optokinetic behavior" evidence=IEA]
[GO:0007605 "sensory perception of sound" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0009952 GO:GO:0050795
GO:GO:0050890 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0008045 GO:GO:0007605 GO:GO:0050905 GO:GO:0048844
GO:GO:0090103 GO:GO:0021612 GO:GO:0042473 GO:GO:0021571
GO:GO:0021754 GeneTree:ENSGT00700000104161 KO:K09301 OMA:RAYPSDH
CTD:3198 GO:GO:0021599 GO:GO:0021953 GO:GO:0048702 GO:GO:0007634
GO:GO:0021569 GO:GO:0021570 GO:GO:0060876 EMBL:AAEX03009390
RefSeq:XP_539484.2 Ensembl:ENSCAFT00000004700 GeneID:482367
KEGG:cfa:482367 NextBio:20856979 Uniprot:E2R5Z1
Length = 333
Score = 200 (75.5 bits), Expect = 9.2e-20, Sum P(2) = 9.2e-20
Identities = 44/75 (58%), Positives = 52/75 (69%)
Query: 242 RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSKD 301
R +T Q ELEKEFHFN+YLTR RR+EIA +L L E Q+KIWFQNRRMK KK + K+
Sbjct: 231 RTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQKK--REKE 288
Query: 302 GGSDAGSDITPATSP 316
G I+PAT P
Sbjct: 289 GLLP----ISPATPP 299
Score = 54 (24.1 bits), Expect = 9.2e-20, Sum P(2) = 9.2e-20
Identities = 12/26 (46%), Positives = 14/26 (53%)
Query: 18 VLPPEHHQQHHY--GATV-LPQNNGV 40
+ PP HH HH+ AT P N GV
Sbjct: 61 ISPPHHHHHHHHPQAATYQTPGNLGV 86
>UNIPROTKB|E2QT64 [details] [associations]
symbol:HOXB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0021754 "facial nucleus development"
evidence=IEA] [GO:0021612 "facial nerve structural organization"
evidence=IEA] [GO:0021571 "rhombomere 5 development" evidence=IEA]
[GO:0021570 "rhombomere 4 development" evidence=IEA] [GO:0019904
"protein domain specific binding" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0005737 GO:GO:0009952
GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048704
GO:GO:0021612 GO:GO:0021571 GO:GO:0021754
GeneTree:ENSGT00700000104161 KO:K09301 GO:GO:0021570 CTD:3211
OMA:YAICNRG EMBL:AAEX03006513 RefSeq:XP_548172.3
Ensembl:ENSCAFT00000026658 GeneID:491052 KEGG:cfa:491052
NextBio:20863953 Uniprot:E2QT64
Length = 305
Score = 192 (72.6 bits), Expect = 1.0e-19, Sum P(2) = 1.0e-19
Identities = 38/62 (61%), Positives = 46/62 (74%)
Query: 242 RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSKD 301
R +T Q ELEKEFHFN+YL+R RR+EIA L L E Q+KIWFQNRRMK KK + ++
Sbjct: 211 RTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQVKIWFQNRRMKQKK--RERE 268
Query: 302 GG 303
GG
Sbjct: 269 GG 270
Score = 59 (25.8 bits), Expect = 1.0e-19, Sum P(2) = 1.0e-19
Identities = 32/113 (28%), Positives = 39/113 (34%)
Query: 7 NSYMPDIKNGGVLP-PEHHQQHHYGATVLPQNNGVEDPSMYDPRQVHHYGQVPNNGQPVH 65
+SY + + GG LP P Q Y A P GV PS G P P +
Sbjct: 43 DSYAGETRYGGGLPSPALQQNSGYPAQQPPSALGVPFPSSATS------GYAPAACSPSY 96
Query: 66 GMP--YPRFPPYDRMDIRNAAYYGAHEGGMEQ-----------YPRPDSPSMG 105
G YP P + + YGA GG+ YP P P G
Sbjct: 97 GPSQYYPLGQPEGDGGYYHPSSYGAQLGGLSDGYGTGGAAPGPYPPPPQPPFG 149
>UNIPROTKB|F1SHS9 [details] [associations]
symbol:HOXA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0090103 "cochlea
morphogenesis" evidence=IEA] [GO:0060876 "semicircular canal
formation" evidence=IEA] [GO:0050905 "neuromuscular process"
evidence=IEA] [GO:0050890 "cognition" evidence=IEA] [GO:0050795
"regulation of behavior" evidence=IEA] [GO:0048844 "artery
morphogenesis" evidence=IEA] [GO:0048702 "embryonic neurocranium
morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0042473 "outer ear morphogenesis" evidence=IEA] [GO:0021953
"central nervous system neuron differentiation" evidence=IEA]
[GO:0021754 "facial nucleus development" evidence=IEA] [GO:0021612
"facial nerve structural organization" evidence=IEA] [GO:0021599
"abducens nerve formation" evidence=IEA] [GO:0021571 "rhombomere 5
development" evidence=IEA] [GO:0021570 "rhombomere 4 development"
evidence=IEA] [GO:0021569 "rhombomere 3 development" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0007634 "optokinetic behavior" evidence=IEA]
[GO:0007605 "sensory perception of sound" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0009952 GO:GO:0050795
GO:GO:0050890 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0008045 GO:GO:0007605 GO:GO:0050905 GO:GO:0048844
GO:GO:0090103 GO:GO:0021612 GO:GO:0042473 GO:GO:0021571
GO:GO:0021754 GeneTree:ENSGT00700000104161 KO:K09301 OMA:RAYPSDH
GO:GO:0021599 GO:GO:0021953 GO:GO:0048702 GO:GO:0007634
GO:GO:0021569 GO:GO:0021570 GO:GO:0060876 EMBL:CU570959
RefSeq:XP_003134892.1 Ensembl:ENSSSCT00000018188 GeneID:100520162
KEGG:ssc:100520162 Uniprot:F1SHS9
Length = 336
Score = 200 (75.5 bits), Expect = 1.0e-19, Sum P(2) = 1.0e-19
Identities = 44/75 (58%), Positives = 52/75 (69%)
Query: 242 RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSKD 301
R +T Q ELEKEFHFN+YLTR RR+EIA +L L E Q+KIWFQNRRMK KK + K+
Sbjct: 234 RTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQKK--REKE 291
Query: 302 GGSDAGSDITPATSP 316
G I+PAT P
Sbjct: 292 GLLP----ISPATPP 302
Score = 54 (24.1 bits), Expect = 1.0e-19, Sum P(2) = 1.0e-19
Identities = 15/55 (27%), Positives = 20/55 (36%)
Query: 18 VLPPEHHQQHHYGATVLPQNNGVEDPSMYDPRQVHHYGQVPNNGQPVHGMPYPRF 72
+ PP HH HH+ PQ + P H P+ G G PY +
Sbjct: 61 ISPPHHHHHHHHHHH--PQPATYQTPGNLGV-SYSHSSCGPSYGAQNFGAPYSSY 112
Score = 37 (18.1 bits), Expect = 6.0e-18, Sum P(2) = 6.0e-18
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 11 PDIKNGGVLPP--EHHQQHH-Y--GATVLPQ 36
P + +G + P +HH H Y GA PQ
Sbjct: 129 PAVYSGNLSSPMVQHHHHHQGYAGGAVGSPQ 159
>UNIPROTKB|H9KZT9 [details] [associations]
symbol:HOXC9 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA] InterPro:IPR001356 InterPro:IPR006711
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104054 InterPro:IPR017112 PIRSF:PIRSF037109
OMA:NNPVANW EMBL:AADN02077928 EMBL:AADN02077929
Ensembl:ENSGALT00000019021 Uniprot:H9KZT9
Length = 241
Score = 234 (87.4 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 47/75 (62%), Positives = 56/75 (74%)
Query: 226 SPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIW 285
+P+ W+ ++ RK+ R YT+YQTLELEKEF FN YLTR RR E+A L LTERQ+KIW
Sbjct: 162 NPVANWIHARSTRKK-RCPYTKYQTLELEKEFLFNMYLTRDRRYEVARVLNLTERQVKIW 220
Query: 286 FQNRRMKWKKENKSK 300
FQNR MK KK NK K
Sbjct: 221 FQNRGMKMKKMNKEK 235
>ZFIN|ZDB-GENE-980526-330 [details] [associations]
symbol:cdx4 "caudal type homeo box transcription
factor 4" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA] [GO:0001756
"somitogenesis" evidence=IGI] [GO:0009952 "anterior/posterior
pattern specification" evidence=IGI;IMP] [GO:0048793 "pronephros
development" evidence=IGI;IMP] [GO:0048384 "retinoic acid receptor
signaling pathway" evidence=IGI] [GO:0031016 "pancreas development"
evidence=IGI;IMP] [GO:0048617 "embryonic foregut morphogenesis"
evidence=IMP] [GO:0021906 "hindbrain-spinal cord boundary
formation" evidence=IMP] [GO:0021903 "rostrocaudal neural tube
patterning" evidence=IGI] [GO:0009948 "anterior/posterior axis
specification" evidence=IGI] [GO:0030097 "hemopoiesis"
evidence=IGI] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR006820 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF04731 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-980526-330
GO:GO:0005634 GO:GO:0003677 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 HSSP:P02833
GO:GO:0001756 GO:GO:0030097 GO:GO:0031016 GO:GO:0048384
GO:GO:0000976 GO:GO:0009948 GO:GO:0048617 GO:GO:0048793
HOGENOM:HOG000115975 HOVERGEN:HBG005302 GO:GO:0021906 EMBL:X66958
IPI:IPI00489697 PIR:S25706 UniGene:Dr.11836
ProteinModelPortal:Q90262 SMR:Q90262 InParanoid:Q90262
NextBio:20933345 ArrayExpress:Q90262 Uniprot:Q90262
Length = 300
Score = 201 (75.8 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 43/71 (60%), Positives = 53/71 (74%)
Query: 238 RKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 297
+++ R YT +Q LELEKEFHFNRY+T RR+ E+A L L+ERQ+KIWFQNRR K +K
Sbjct: 151 KEKYRVVYTDHQRLELEKEFHFNRYITIRRKSELAVNLGLSERQVKIWFQNRRAKERKLI 210
Query: 298 KSKDGGSDAGS 308
K K G SD GS
Sbjct: 211 KKKLGQSD-GS 220
Score = 47 (21.6 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 19/64 (29%), Positives = 23/64 (35%)
Query: 17 GVLPPEHHQQHHYGAT-----VLPQNNGVEDPSMYDPRQVHHYGQVPNNGQPVH--GMPY 69
G L + +H GA LP N V P D HH + + Q G PY
Sbjct: 4 GYLLEKEASMYHQGAVRRSGISLPPQNFVSTPQYSDFTGYHHVPNMETHAQSAGAWGAPY 63
Query: 70 --PR 71
PR
Sbjct: 64 GAPR 67
Score = 36 (17.7 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
Identities = 6/15 (40%), Positives = 10/15 (66%)
Query: 21 PEHHQQHHYGATVLP 35
P+++ H G+ VLP
Sbjct: 98 PDYNTMHGPGSAVLP 112
>MGI|MGI:102851 [details] [associations]
symbol:Pdx1 "pancreatic and duodenal homeobox 1"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0001046 "core promoter sequence-specific DNA binding"
evidence=ISO] [GO:0001889 "liver development" evidence=IMP]
[GO:0003309 "type B pancreatic cell differentiation" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO;IDA] [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005622 "intracellular" evidence=IDA]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0006006 "glucose metabolic process" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=ISO]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IDA;IMP] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0007224 "smoothened signaling pathway" evidence=ISO]
[GO:0007263 "nitric oxide mediated signal transduction"
evidence=ISO] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0008284 "positive regulation of cell
proliferation" evidence=ISO;IMP] [GO:0008285 "negative regulation
of cell proliferation" evidence=IMP] [GO:0009749 "response to
glucose stimulus" evidence=ISO] [GO:0010942 "positive regulation of
cell death" evidence=ISO] [GO:0016331 "morphogenesis of embryonic
epithelium" evidence=IMP] [GO:0030073 "insulin secretion"
evidence=ISO] [GO:0030154 "cell differentiation" evidence=ISO;IMP]
[GO:0031016 "pancreas development" evidence=IMP] [GO:0031017
"exocrine pancreas development" evidence=IMP] [GO:0031018
"endocrine pancreas development" evidence=IMP] [GO:0032024
"positive regulation of insulin secretion" evidence=ISO]
[GO:0032403 "protein complex binding" evidence=ISO] [GO:0042127
"regulation of cell proliferation" evidence=IDA] [GO:0042593
"glucose homeostasis" evidence=ISO;IMP] [GO:0043388 "positive
regulation of DNA binding" evidence=ISO] [GO:0043565
"sequence-specific DNA binding" evidence=ISO;IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO;IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;IDA] [GO:0046982
"protein heterodimerization activity" evidence=ISO] [GO:0048565
"digestive tract development" evidence=IMP] [GO:0048863 "stem cell
differentiation" evidence=ISO] [GO:0051594 "detection of glucose"
evidence=ISO] Reactome:REACT_13641 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 MGI:MGI:102851 GO:GO:0005829
GO:GO:0008285 GO:GO:0005654 GO:GO:0030154 GO:GO:0008284
GO:GO:0043565 GO:GO:0045944 GO:GO:0001889 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 GO:GO:0042593 GO:GO:0006006
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000122 Reactome:REACT_127416 GO:GO:0007263 GO:GO:0031018
GO:GO:0016331 GO:GO:0048565 GO:GO:0030073 GO:GO:0031017
GeneTree:ENSGT00700000104446 CTD:3651 eggNOG:NOG271681
HOGENOM:HOG000115484 HOVERGEN:HBG004525 KO:K07594 OMA:PYEVPPI
OrthoDB:EOG4M0F2P EMBL:X74342 EMBL:AK020261 EMBL:BC103572
EMBL:BC103581 EMBL:BC103582 EMBL:BC105642 IPI:IPI00132557
PIR:S39581 RefSeq:NP_032840.1 UniGene:Mm.389714
ProteinModelPortal:P52946 SMR:P52946 MINT:MINT-3982089
STRING:P52946 PhosphoSite:P52946 PRIDE:P52946
Ensembl:ENSMUST00000085591 GeneID:18609 KEGG:mmu:18609
UCSC:uc009any.2 InParanoid:Q3ZB03 NextBio:294534 Bgee:P52946
CleanEx:MM_PDX1 Genevestigator:P52946 GermOnline:ENSMUSG00000029644
Uniprot:P52946
Length = 284
Score = 233 (87.1 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 46/72 (63%), Positives = 55/72 (76%)
Query: 237 ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 296
E KR R YTR Q LELEKEF FN+Y++R RR+E+A L LTER IKIWFQNRRMKWKKE
Sbjct: 146 ENKRTRTAYTRAQLLELEKEFLFNKYISRPRRVELAVMLNLTERHIKIWFQNRRMKWKKE 205
Query: 297 -NKSKDGGSDAG 307
+K + G+ +G
Sbjct: 206 EDKKRSSGTPSG 217
>UNIPROTKB|D4A2V8 [details] [associations]
symbol:D4A2V8 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007519 "skeletal muscle tissue development"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0009954 "proximal/distal pattern formation"
evidence=IEA] [GO:0030879 "mammary gland development" evidence=IEA]
[GO:0035115 "embryonic forelimb morphogenesis" evidence=IEA]
[GO:0035137 "hindlimb morphogenesis" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA] [GO:0048935 "peripheral nervous system neuron
development" evidence=IEA] InterPro:IPR001356 InterPro:IPR006711
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0045944 GO:GO:0008344
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0035115 GO:GO:0009954
GO:GO:0048704 GO:GO:0035137 GO:GO:0030879 GO:GO:0048935
GO:GO:0007519 GeneTree:ENSGT00700000104054 OrthoDB:EOG4D26QZ
InterPro:IPR017112 PIRSF:PIRSF037109 IPI:IPI00557981
Ensembl:ENSRNOT00000065426 ArrayExpress:D4A2V8 Uniprot:D4A2V8
Length = 336
Score = 233 (87.1 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 47/75 (62%), Positives = 56/75 (74%)
Query: 226 SPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIW 285
+P W+ ++ RK+ R YT+YQTLELEKEF FN YLTR RR E+A L LTERQ+KIW
Sbjct: 258 NPAANWIHARSTRKK-RCPYTKYQTLELEKEFLFNMYLTRDRRYEVARILNLTERQVKIW 316
Query: 286 FQNRRMKWKKENKSK 300
FQNRRMK KK +K K
Sbjct: 317 FQNRRMKMKKMSKEK 331
>UNIPROTKB|D4ACE0 [details] [associations]
symbol:D4ACE0 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007519 "skeletal muscle tissue development"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0009954 "proximal/distal pattern formation"
evidence=IEA] [GO:0030879 "mammary gland development" evidence=IEA]
[GO:0035115 "embryonic forelimb morphogenesis" evidence=IEA]
[GO:0035137 "hindlimb morphogenesis" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA] [GO:0048935 "peripheral nervous system neuron
development" evidence=IEA] InterPro:IPR001356 InterPro:IPR006711
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
InterPro:IPR017112 PIRSF:PIRSF037109 IPI:IPI00949703
Ensembl:ENSRNOT00000002146 ArrayExpress:D4ACE0 Uniprot:D4ACE0
Length = 332
Score = 233 (87.1 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 47/75 (62%), Positives = 56/75 (74%)
Query: 226 SPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIW 285
+P W+ ++ RK+ R YT+YQTLELEKEF FN YLTR RR E+A L LTERQ+KIW
Sbjct: 254 NPAANWIHARSTRKK-RCPYTKYQTLELEKEFLFNMYLTRDRRYEVARILNLTERQVKIW 312
Query: 286 FQNRRMKWKKENKSK 300
FQNRRMK KK +K K
Sbjct: 313 FQNRRMKMKKMSKEK 327
>UNIPROTKB|E1BQM6 [details] [associations]
symbol:HOXB9 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0030879 "mammary gland development" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0048706 "embryonic
skeletal system development" evidence=IEA] [GO:0060070 "canonical
Wnt receptor signaling pathway" evidence=IEA] [GO:0060326 "cell
chemotaxis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR006711 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005739 GO:GO:0005634
GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0060326 GO:GO:0060070 GeneTree:ENSGT00700000104054
InterPro:IPR017112 PIRSF:PIRSF037109 OMA:CSFQPKP EMBL:AADN02070200
EMBL:AADN02070201 IPI:IPI00587901 Ensembl:ENSGALT00000001947
Uniprot:E1BQM6
Length = 250
Score = 232 (86.7 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 48/79 (60%), Positives = 58/79 (73%)
Query: 226 SPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIW 285
+P W+ ++ RK+ R YT+YQTLELEKEF FN YLTR RR E+A L L+ERQ+KIW
Sbjct: 171 NPAASWLHARSSRKK-RCPYTKYQTLELEKEFLFNMYLTRDRRHEVARLLNLSERQVKIW 229
Query: 286 FQNRRMKWKKENKS--KDG 302
FQNRRMK KK NK K+G
Sbjct: 230 FQNRRMKMKKMNKEQGKEG 248
>ZFIN|ZDB-GENE-990415-109 [details] [associations]
symbol:hoxb9a "homeo box B9a" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR006711 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-990415-109
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104054 InterPro:IPR017112 PIRSF:PIRSF037109
EMBL:BX927395 Ensembl:ENSDART00000006479 Bgee:H7BWW5 Uniprot:H7BWW5
Length = 253
Score = 232 (86.7 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 47/74 (63%), Positives = 55/74 (74%)
Query: 227 PLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWF 286
P W+ ++ RK+ R YT+YQTLELEKEF FN YLTR RR E+A L LTERQ+KIWF
Sbjct: 178 PSANWLHARSSRKK-RCPYTKYQTLELEKEFLFNMYLTRDRRHEVARLLNLTERQVKIWF 236
Query: 287 QNRRMKWKKENKSK 300
QNRRMK KK NK +
Sbjct: 237 QNRRMKMKKMNKDQ 250
>MGI|MGI:96182 [details] [associations]
symbol:Hoxb1 "homeobox B1" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=ISO;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0009653 "anatomical structure morphogenesis" evidence=IGI]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IGI] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0021546 "rhombomere development" evidence=IDA]
[GO:0021570 "rhombomere 4 development" evidence=IGI] [GO:0021571
"rhombomere 5 development" evidence=IGI] [GO:0021612 "facial nerve
structural organization" evidence=IMP] [GO:0021754 "facial nucleus
development" evidence=IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IGI] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0048646 "anatomical structure formation involved in
morphogenesis" evidence=IGI] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IGI] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 MGI:MGI:96182 GO:GO:0005634
GO:GO:0005737 GO:GO:0009952 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048704 GO:GO:0021612
GO:GO:0021571 GO:GO:0021754 GeneTree:ENSGT00700000104161
eggNOG:NOG236971 KO:K09301 HOGENOM:HOG000247020 HOVERGEN:HBG006089
GO:GO:0021570 OrthoDB:EOG44F69X CTD:3211 OMA:YAICNRG EMBL:X53063
EMBL:X59474 EMBL:AK017686 EMBL:BC103597 EMBL:BC103598 EMBL:BC103606
EMBL:M34005 IPI:IPI00308822 PIR:A60082 RefSeq:NP_032292.3
UniGene:Mm.890 ProteinModelPortal:P17919 SMR:P17919 STRING:P17919
PhosphoSite:P17919 PRIDE:P17919 Ensembl:ENSMUST00000019117
GeneID:15407 KEGG:mmu:15407 InParanoid:P17919 NextBio:288120
Bgee:P17919 CleanEx:MM_HOXB1 Genevestigator:P17919
GermOnline:ENSMUSG00000018973 Uniprot:P17919
Length = 297
Score = 192 (72.6 bits), Expect = 2.2e-19, Sum P(2) = 2.2e-19
Identities = 38/62 (61%), Positives = 46/62 (74%)
Query: 242 RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSKD 301
R +T Q ELEKEFHFN+YL+R RR+EIA L L E Q+KIWFQNRRMK KK + ++
Sbjct: 203 RTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQVKIWFQNRRMKQKK--RERE 260
Query: 302 GG 303
GG
Sbjct: 261 GG 262
Score = 54 (24.1 bits), Expect = 2.2e-19, Sum P(2) = 2.2e-19
Identities = 30/110 (27%), Positives = 40/110 (36%)
Query: 7 NSYMPDIKNGGVLPPEHHQQHH-YGATVLPQNNGVEDPS-------------MYDPRQVH 52
+SY + + GG LP QQ+ Y P + GV PS Y P Q +
Sbjct: 37 DSYAGESRYGGGLPSSALQQNSGYPVQQPPSSLGVSFPSPAPSGYAPAACNPSYGPSQYY 96
Query: 53 HYGQVPNNGQPVHGMPYPRFPPYDRMDIRNAAYYGAHEGGMEQYPRPDSP 102
GQ +G H Y + ++ YGA G YP P P
Sbjct: 97 SVGQSEGDGSYFHPSSYGA----QLGGLPDS--YGAGGVGSGPYPPPQPP 140
>UNIPROTKB|E2R520 [details] [associations]
symbol:HOXA9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060216 "definitive hemopoiesis"
evidence=IEA] [GO:0048706 "embryonic skeletal system development"
evidence=IEA] [GO:0042118 "endothelial cell activation"
evidence=IEA] [GO:0035115 "embryonic forelimb morphogenesis"
evidence=IEA] [GO:0030879 "mammary gland development" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=IEA] [GO:0009954
"proximal/distal pattern formation" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR006711 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF04617 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005737 GO:GO:0009952 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0035115
GO:GO:0009954 GO:GO:0048706 GO:GO:0030879 GO:GO:0060216
GeneTree:ENSGT00700000104054 InterPro:IPR017112 PIRSF:PIRSF037109
CTD:3205 KO:K09294 OMA:SWLEPAP EMBL:AAEX03009390 RefSeq:XP_539489.2
ProteinModelPortal:E2R520 Ensembl:ENSCAFT00000004746 GeneID:482372
KEGG:cfa:482372 NextBio:20856985 Uniprot:E2R520
Length = 272
Score = 231 (86.4 bits), Expect = 2.5e-19, P = 2.5e-19
Identities = 48/77 (62%), Positives = 57/77 (74%)
Query: 225 PS-PLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIK 283
PS P W+ ++ RK+ R YT++QTLELEKEF FN YLTR RR E+A L LTERQ+K
Sbjct: 193 PSNPAANWLHARSTRKK-RCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVK 251
Query: 284 IWFQNRRMKWKKENKSK 300
IWFQNRRMK KK NK +
Sbjct: 252 IWFQNRRMKMKKINKDR 268
>UNIPROTKB|F1SHT5 [details] [associations]
symbol:LOC100737711 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR006711
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104054 InterPro:IPR017112 PIRSF:PIRSF037109
KO:K09294 OMA:SWLEPAP EMBL:CU570959 EMBL:CU480612
RefSeq:XP_003134886.1 RefSeq:XP_003484104.1
Ensembl:ENSSSCT00000018181 Ensembl:ENSSSCT00000029161
GeneID:100519066 GeneID:100737711 KEGG:ssc:100519066
KEGG:ssc:100737711 Uniprot:F1SHT5
Length = 272
Score = 231 (86.4 bits), Expect = 2.5e-19, P = 2.5e-19
Identities = 48/77 (62%), Positives = 57/77 (74%)
Query: 225 PS-PLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIK 283
PS P W+ ++ RK+ R YT++QTLELEKEF FN YLTR RR E+A L LTERQ+K
Sbjct: 193 PSNPAANWLHARSTRKK-RCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVK 251
Query: 284 IWFQNRRMKWKKENKSK 300
IWFQNRRMK KK NK +
Sbjct: 252 IWFQNRRMKMKKINKDR 268
>UNIPROTKB|F1PZW4 [details] [associations]
symbol:HOXA10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
OMA:CRMEPPD GeneTree:ENSGT00700000104054 EMBL:AAEX03009390
Ensembl:ENSCAFT00000004748 Uniprot:F1PZW4
Length = 413
Score = 219 (82.2 bits), Expect = 2.6e-19, Sum P(2) = 2.6e-19
Identities = 42/68 (61%), Positives = 55/68 (80%)
Query: 231 WMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRR 290
W+ ++ RK+ R YT++QTLELEKEF FN YLTR RR+EI+ ++ LT+RQ+KIWFQNRR
Sbjct: 333 WLTAKSGRKK-RCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRR 391
Query: 291 MKWKKENK 298
MK KK N+
Sbjct: 392 MKLKKMNR 399
Score = 36 (17.7 bits), Expect = 2.6e-19, Sum P(2) = 2.6e-19
Identities = 6/9 (66%), Positives = 7/9 (77%)
Query: 68 PYPRFPPYD 76
P+PR PP D
Sbjct: 191 PFPRGPPPD 199
>RGD|6491746 [details] [associations]
symbol:LOC100911668 "homeobox protein Hox-A10-like"
species:10116 "Rattus norvegicus" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:6491746 RGD:6501881 GO:GO:0009952 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0030326 GO:GO:0001501
GO:GO:0009954 KO:K09295 GeneTree:ENSGT00700000104054
OrthoDB:EOG4VX26S EMBL:AC122669 IPI:IPI00914215
RefSeq:XP_003749805.1 RefSeq:XP_003752230.1
Ensembl:ENSRNOT00000036394 GeneID:100909714 GeneID:100911668
KEGG:rno:100909714 KEGG:rno:100911668 Uniprot:D3ZHM5
Length = 413
Score = 219 (82.2 bits), Expect = 2.6e-19, Sum P(2) = 2.6e-19
Identities = 42/68 (61%), Positives = 55/68 (80%)
Query: 231 WMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRR 290
W+ ++ RK+ R YT++QTLELEKEF FN YLTR RR+EI+ ++ LT+RQ+KIWFQNRR
Sbjct: 333 WLTAKSGRKK-RCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRR 391
Query: 291 MKWKKENK 298
MK KK N+
Sbjct: 392 MKLKKMNR 399
Score = 36 (17.7 bits), Expect = 2.6e-19, Sum P(2) = 2.6e-19
Identities = 6/9 (66%), Positives = 7/9 (77%)
Query: 68 PYPRFPPYD 76
P+PR PP D
Sbjct: 196 PFPRGPPPD 204
>RGD|6501881 [details] [associations]
symbol:LOC100909714 "homeobox protein Hox-A10-like"
species:10116 "Rattus norvegicus" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:6491746 RGD:6501881 GO:GO:0009952 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0030326 GO:GO:0001501
GO:GO:0009954 KO:K09295 GeneTree:ENSGT00700000104054
OrthoDB:EOG4VX26S EMBL:AC122669 IPI:IPI00914215
RefSeq:XP_003749805.1 RefSeq:XP_003752230.1
Ensembl:ENSRNOT00000036394 GeneID:100909714 GeneID:100911668
KEGG:rno:100909714 KEGG:rno:100911668 Uniprot:D3ZHM5
Length = 413
Score = 219 (82.2 bits), Expect = 2.6e-19, Sum P(2) = 2.6e-19
Identities = 42/68 (61%), Positives = 55/68 (80%)
Query: 231 WMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRR 290
W+ ++ RK+ R YT++QTLELEKEF FN YLTR RR+EI+ ++ LT+RQ+KIWFQNRR
Sbjct: 333 WLTAKSGRKK-RCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRR 391
Query: 291 MKWKKENK 298
MK KK N+
Sbjct: 392 MKLKKMNR 399
Score = 36 (17.7 bits), Expect = 2.6e-19, Sum P(2) = 2.6e-19
Identities = 6/9 (66%), Positives = 7/9 (77%)
Query: 68 PYPRFPPYD 76
P+PR PP D
Sbjct: 196 PFPRGPPPD 204
>MGI|MGI:96171 [details] [associations]
symbol:Hoxa10 "homeobox A10" species:10090 "Mus musculus"
[GO:0001501 "skeletal system development" evidence=IGI] [GO:0003677
"DNA binding" evidence=TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IDA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IGI] [GO:0009954 "proximal/distal pattern
formation" evidence=IGI] [GO:0030326 "embryonic limb morphogenesis"
evidence=IGI] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 MGI:MGI:96171 GO:GO:0009952 GO:GO:0003677
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0030326 GO:GO:0001501 GO:GO:0009954 CTD:3206 eggNOG:NOG248153
HOGENOM:HOG000231182 HOVERGEN:HBG052934 KO:K09295 OMA:CRMEPPD
EMBL:L08757 EMBL:L08758 EMBL:BC050839 EMBL:M81659 IPI:IPI00133247
IPI:IPI00228049 PIR:I49754 RefSeq:NP_001116422.1 RefSeq:NP_032289.2
UniGene:Mm.5 ProteinModelPortal:P31310 SMR:P31310 IntAct:P31310
MINT:MINT-1172417 STRING:P31310 PhosphoSite:P31310 PRIDE:P31310
Ensembl:ENSMUST00000121043 Ensembl:ENSMUST00000125581 GeneID:15395
KEGG:mmu:15395 UCSC:uc009bym.1 UCSC:uc012ema.1
GeneTree:ENSGT00700000104054 InParanoid:P31310 OrthoDB:EOG4VX26S
NextBio:288076 Bgee:P31310 CleanEx:MM_HOXA10 Genevestigator:P31310
GermOnline:ENSMUSG00000000938 Uniprot:P31310
Length = 416
Score = 219 (82.2 bits), Expect = 2.7e-19, Sum P(2) = 2.7e-19
Identities = 42/68 (61%), Positives = 55/68 (80%)
Query: 231 WMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRR 290
W+ ++ RK+ R YT++QTLELEKEF FN YLTR RR+EI+ ++ LT+RQ+KIWFQNRR
Sbjct: 336 WLTAKSGRKK-RCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRR 394
Query: 291 MKWKKENK 298
MK KK N+
Sbjct: 395 MKLKKMNR 402
Score = 36 (17.7 bits), Expect = 2.7e-19, Sum P(2) = 2.7e-19
Identities = 6/9 (66%), Positives = 7/9 (77%)
Query: 68 PYPRFPPYD 76
P+PR PP D
Sbjct: 197 PFPRGPPPD 205
>UNIPROTKB|G3V737 [details] [associations]
symbol:Hoxb1 "Homeo box B1 (Predicted), isoform CRA_a"
species:10116 "Rattus norvegicus" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0021570 "rhombomere 4 development"
evidence=IEA] [GO:0021571 "rhombomere 5 development" evidence=IEA]
[GO:0021612 "facial nerve structural organization" evidence=IEA]
[GO:0021754 "facial nucleus development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:1310298 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
EMBL:CH473948 GeneTree:ENSGT00700000104161 KO:K09301 CTD:3211
OMA:YAICNRG RefSeq:XP_001081344.1 RefSeq:XP_220896.4
UniGene:Rn.13797 Ensembl:ENSRNOT00000011416 GeneID:303491
KEGG:rno:303491 NextBio:651436 Uniprot:G3V737
Length = 297
Score = 192 (72.6 bits), Expect = 2.8e-19, Sum P(2) = 2.8e-19
Identities = 38/62 (61%), Positives = 46/62 (74%)
Query: 242 RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSKD 301
R +T Q ELEKEFHFN+YL+R RR+EIA L L E Q+KIWFQNRRMK KK + ++
Sbjct: 203 RTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQVKIWFQNRRMKQKK--RERE 260
Query: 302 GG 303
GG
Sbjct: 261 GG 262
Score = 53 (23.7 bits), Expect = 2.8e-19, Sum P(2) = 2.8e-19
Identities = 31/104 (29%), Positives = 38/104 (36%)
Query: 7 NSYMPDIKNGGVLPPEHHQQHH-YGATVLPQNNGVEDPSM----YDPRQVH-HYG--QVP 58
+SY + + GG LP QQ+ Y P + GV PS Y P + YG Q
Sbjct: 37 DSYAGESRYGGGLPSSALQQNSGYPVQQPPSSLGVSFPSSAPSGYAPAACNPSYGPSQYY 96
Query: 59 NNGQPVHGMPYPRFPPYDRMDIRNAAYYGAHEGGMEQYPRPDSP 102
+ GQ Y Y YGA G YP P P
Sbjct: 97 SMGQSEGDGGYFHPSSYGAQLGGLPDSYGAGGVGSGPYPPPQPP 140
>UNIPROTKB|F1NE14 [details] [associations]
symbol:LOC100858551 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0009954 "proximal/distal pattern
formation" evidence=IEA] [GO:0030879 "mammary gland development"
evidence=IEA] [GO:0035115 "embryonic forelimb morphogenesis"
evidence=IEA] [GO:0048706 "embryonic skeletal system development"
evidence=IEA] [GO:0060216 "definitive hemopoiesis" evidence=IEA]
InterPro:IPR001356 InterPro:IPR006711 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005737 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GeneTree:ENSGT00700000104054 EMBL:AADN02000988 IPI:IPI00682592
Ensembl:ENSGALT00000018035 Uniprot:F1NE14
Length = 169
Score = 230 (86.0 bits), Expect = 3.1e-19, P = 3.1e-19
Identities = 46/75 (61%), Positives = 56/75 (74%)
Query: 226 SPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIW 285
+P W+ ++ RK+ R YT++QTLELEKEF FN YLTR RR E+A L LTERQ+KIW
Sbjct: 92 NPAANWLHARSTRKK-RCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIW 150
Query: 286 FQNRRMKWKKENKSK 300
FQNRRMK KK NK +
Sbjct: 151 FQNRRMKMKKINKDR 165
>UNIPROTKB|F1NJG5 [details] [associations]
symbol:LOC100858551 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0009954 "proximal/distal pattern
formation" evidence=IEA] [GO:0030879 "mammary gland development"
evidence=IEA] [GO:0035115 "embryonic forelimb morphogenesis"
evidence=IEA] [GO:0048706 "embryonic skeletal system development"
evidence=IEA] [GO:0060216 "definitive hemopoiesis" evidence=IEA]
InterPro:IPR001356 InterPro:IPR006711 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005737 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GeneTree:ENSGT00700000104054 InterPro:IPR017112 PIRSF:PIRSF037109
IPI:IPI00583350 OMA:SWLEPAP EMBL:AADN02000988
Ensembl:ENSGALT00000019407 Uniprot:F1NJG5
Length = 254
Score = 230 (86.0 bits), Expect = 3.1e-19, P = 3.1e-19
Identities = 46/75 (61%), Positives = 56/75 (74%)
Query: 226 SPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIW 285
+P W+ ++ RK+ R YT++QTLELEKEF FN YLTR RR E+A L LTERQ+KIW
Sbjct: 177 NPAANWLHARSTRKK-RCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIW 235
Query: 286 FQNRRMKWKKENKSK 300
FQNRRMK KK NK +
Sbjct: 236 FQNRRMKMKKINKDR 250
>UNIPROTKB|Q98924 [details] [associations]
symbol:HOXA9 "Homeobox protein Hox-A9" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR006711 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 eggNOG:NOG286554
HOVERGEN:HBG016849 HOGENOM:HOG000231180 EMBL:X97750 IPI:IPI00583350
UniGene:Gga.649 ProteinModelPortal:Q98924 SMR:Q98924 STRING:Q98924
InParanoid:Q98924 Uniprot:Q98924
Length = 169
Score = 230 (86.0 bits), Expect = 3.1e-19, P = 3.1e-19
Identities = 46/75 (61%), Positives = 56/75 (74%)
Query: 226 SPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIW 285
+P W+ ++ RK+ R YT++QTLELEKEF FN YLTR RR E+A L LTERQ+KIW
Sbjct: 92 NPAANWLHARSTRKK-RCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIW 150
Query: 286 FQNRRMKWKKENKSK 300
FQNRRMK KK NK +
Sbjct: 151 FQNRRMKMKKINKDR 165
>UNIPROTKB|D6RAR5 [details] [associations]
symbol:D6RAR5 "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 EMBL:AC004080
HOGENOM:HOG000294138 IPI:IPI00382764 ProteinModelPortal:D6RAR5
SMR:D6RAR5 Ensembl:ENST00000470747 Uniprot:D6RAR5
Length = 112
Score = 230 (86.0 bits), Expect = 3.1e-19, P = 3.1e-19
Identities = 46/75 (61%), Positives = 56/75 (74%)
Query: 226 SPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIW 285
+P W+ ++ RK+ R YT++QTLELEKEF FN YLTR RR E+A L LTERQ+KIW
Sbjct: 35 NPAANWLHARSTRKK-RCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIW 93
Query: 286 FQNRRMKWKKENKSK 300
FQNRRMK KK NK +
Sbjct: 94 FQNRRMKMKKINKDR 108
>UNIPROTKB|P31269 [details] [associations]
symbol:HOXA9 "Homeobox protein Hox-A9" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0009954 "proximal/distal pattern formation" evidence=IEA]
[GO:0030879 "mammary gland development" evidence=IEA] [GO:0035115
"embryonic forelimb morphogenesis" evidence=IEA] [GO:0048706
"embryonic skeletal system development" evidence=IEA] [GO:0060216
"definitive hemopoiesis" evidence=IEA] [GO:0045638 "negative
regulation of myeloid cell differentiation" evidence=ISS]
[GO:0019899 "enzyme binding" evidence=IPI] [GO:0042118 "endothelial
cell activation" evidence=IMP] [GO:0007275 "multicellular
organismal development" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001356 InterPro:IPR006711 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 eggNOG:NOG286554
GO:GO:0042118 GO:GO:0045638 EMBL:AC004080 UniGene:Hs.659350
HOVERGEN:HBG016849 HOGENOM:HOG000231180 OrthoDB:EOG4D26QZ
InterPro:IPR017112 PIRSF:PIRSF037109 EMBL:U82759 EMBL:AF010258
EMBL:BT006990 EMBL:BC006537 EMBL:BC010023 EMBL:U41813
IPI:IPI00010744 PIR:S14929 RefSeq:NP_689952.1
ProteinModelPortal:P31269 SMR:P31269 IntAct:P31269 STRING:P31269
PhosphoSite:P31269 DMDM:6166219 PRIDE:P31269 DNASU:3205
Ensembl:ENST00000343483 GeneID:3205 KEGG:hsa:3205 UCSC:uc003syt.3
CTD:3205 GeneCards:GC07M027214 HGNC:HGNC:5109 MIM:142956
neXtProt:NX_P31269 PharmGKB:PA29386 InParanoid:P31269 KO:K09294
OMA:SWLEPAP PhylomeDB:P31269 ChiTaRS:HOXA9 GenomeRNAi:3205
NextBio:12752 ArrayExpress:P31269 Bgee:P31269 CleanEx:HS_HOXA9
Genevestigator:P31269 GermOnline:ENSG00000078399 Uniprot:P31269
Length = 272
Score = 230 (86.0 bits), Expect = 3.1e-19, P = 3.1e-19
Identities = 46/75 (61%), Positives = 56/75 (74%)
Query: 226 SPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIW 285
+P W+ ++ RK+ R YT++QTLELEKEF FN YLTR RR E+A L LTERQ+KIW
Sbjct: 195 NPAANWLHARSTRKK-RCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIW 253
Query: 286 FQNRRMKWKKENKSK 300
FQNRRMK KK NK +
Sbjct: 254 FQNRRMKMKKINKDR 268
>UNIPROTKB|P51783 [details] [associations]
symbol:HOXA9 "Homeobox protein Hox-A9" species:10141 "Cavia
porcellus" [GO:0045638 "negative regulation of myeloid cell
differentiation" evidence=ISS] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 eggNOG:NOG286554
GO:GO:0045638 HOGENOM:HOG000294138 HOVERGEN:HBG016849
OrthoDB:EOG4D26QZ EMBL:X13536 PIR:A48428 ProteinModelPortal:P51783
SMR:P51783 Uniprot:P51783
Length = 162
Score = 230 (86.0 bits), Expect = 3.1e-19, P = 3.1e-19
Identities = 46/75 (61%), Positives = 56/75 (74%)
Query: 226 SPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIW 285
+P W+ ++ RK+ R YT++QTLELEKEF FN YLTR RR E+A L LTERQ+KIW
Sbjct: 85 NPAANWLHARSTRKK-RCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIW 143
Query: 286 FQNRRMKWKKENKSK 300
FQNRRMK KK NK +
Sbjct: 144 FQNRRMKMKKINKDR 158
WARNING: HSPs involving 1167 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.134 0.427 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 317 245 0.00099 113 3 11 22 0.48 33
32 0.45 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1417
No. of states in DFA: 608 (65 KB)
Total size of DFA: 217 KB (2119 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 24.29u 0.10s 24.39t Elapsed: 00:00:06
Total cpu time: 24.32u 0.10s 24.42t Elapsed: 00:00:06
Start: Thu Aug 15 11:19:57 2013 End: Thu Aug 15 11:20:03 2013
WARNINGS ISSUED: 2