Query psy3287
Match_columns 122
No_of_seqs 129 out of 788
Neff 6.4
Searched_HMMs 29240
Date Fri Aug 16 21:09:42 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3287.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/3287hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4a5s_A Dipeptidyl peptidase 4 99.6 2.3E-16 7.9E-21 133.5 6.8 83 27-119 115-201 (740)
2 1xfd_A DIP, dipeptidyl aminope 99.3 6.8E-12 2.3E-16 103.9 10.2 82 28-119 118-203 (723)
3 1z68_A Fibroblast activation p 99.3 2.4E-12 8.3E-17 107.1 6.7 81 28-118 114-198 (719)
4 2z3z_A Dipeptidyl aminopeptida 99.1 2.8E-10 9.7E-15 94.2 9.1 79 28-119 125-211 (706)
5 2ecf_A Dipeptidyl peptidase IV 99.0 8E-10 2.7E-14 91.9 7.0 77 28-115 156-235 (741)
6 2gop_A Trilobed protease; beta 96.7 0.006 2E-07 45.3 7.4 52 29-109 64-124 (347)
7 3pe7_A Oligogalacturonate lyas 96.5 0.011 3.7E-07 44.5 8.1 54 29-109 41-101 (388)
8 3c5m_A Oligogalacturonate lyas 96.4 0.012 4.3E-07 44.0 7.9 56 28-110 40-102 (396)
9 3pe7_A Oligogalacturonate lyas 96.2 0.021 7.1E-07 42.9 7.8 74 2-111 176-260 (388)
10 4a5s_A Dipeptidyl peptidase 4 95.7 0.025 8.4E-07 47.6 7.0 72 2-107 44-130 (740)
11 2ecf_A Dipeptidyl peptidase IV 95.6 0.058 2E-06 44.4 8.6 62 27-118 112-179 (741)
12 1k32_A Tricorn protease; prote 95.4 0.036 1.2E-06 48.4 7.1 53 29-109 20-73 (1045)
13 3azo_A Aminopeptidase; POP fam 95.0 0.03 1E-06 45.7 5.0 55 28-110 134-209 (662)
14 2hqs_A Protein TOLB; TOLB, PAL 94.8 0.094 3.2E-06 41.0 7.3 62 29-118 272-342 (415)
15 1xfd_A DIP, dipeptidyl aminope 94.7 0.061 2.1E-06 44.1 6.3 56 28-108 65-133 (723)
16 2hqs_A Protein TOLB; TOLB, PAL 94.7 0.13 4.4E-06 40.2 7.9 57 28-112 227-290 (415)
17 2xdw_A Prolyl endopeptidase; a 94.6 0.086 2.9E-06 43.9 7.1 56 28-111 129-193 (710)
18 1z68_A Fibroblast activation p 94.5 0.038 1.3E-06 45.6 4.7 78 2-118 44-137 (719)
19 2xe4_A Oligopeptidase B; hydro 94.4 0.095 3.2E-06 44.7 6.9 57 27-112 177-244 (751)
20 2ojh_A Uncharacterized protein 94.2 0.38 1.3E-05 33.6 8.9 26 88-117 132-157 (297)
21 2ojh_A Uncharacterized protein 93.9 0.22 7.5E-06 34.9 7.1 50 35-110 56-106 (297)
22 2gop_A Trilobed protease; beta 93.7 0.2 7E-06 36.9 6.8 39 40-110 42-80 (347)
23 3o4h_A Acylamino-acid-releasin 93.4 0.31 1E-05 39.2 7.9 50 27-104 153-210 (582)
24 2z3z_A Dipeptidyl aminopeptida 93.1 0.41 1.4E-05 39.2 8.3 19 88-110 261-279 (706)
25 1k32_A Tricorn protease; prote 92.7 0.51 1.7E-05 41.1 8.8 55 29-110 384-442 (1045)
26 3azo_A Aminopeptidase; POP fam 91.9 0.5 1.7E-05 38.3 7.4 53 35-110 94-151 (662)
27 2bkl_A Prolyl endopeptidase; m 91.4 0.64 2.2E-05 38.6 7.6 63 35-118 82-154 (695)
28 2bkl_A Prolyl endopeptidase; m 91.3 0.47 1.6E-05 39.4 6.7 20 88-111 171-190 (695)
29 3c5m_A Oligogalacturonate lyas 91.1 0.83 2.8E-05 33.8 7.3 18 89-110 242-259 (396)
30 1yr2_A Prolyl oligopeptidase; 90.8 0.48 1.6E-05 39.7 6.3 55 28-111 167-230 (741)
31 2xdw_A Prolyl endopeptidase; a 88.2 1.6 5.3E-05 36.3 7.5 55 35-110 86-146 (710)
32 1yr2_A Prolyl oligopeptidase; 87.1 2.2 7.6E-05 35.6 7.8 54 35-109 121-183 (741)
33 3o4h_A Acylamino-acid-releasin 85.7 0.6 2.1E-05 37.4 3.5 70 28-118 199-274 (582)
34 3iuj_A Prolyl endopeptidase; h 85.6 1.5 5.2E-05 36.5 6.1 52 30-110 135-195 (693)
35 3g4e_A Regucalcin; six bladed 85.2 1.1 3.7E-05 32.9 4.5 30 84-117 148-177 (297)
36 2xe4_A Oligopeptidase B; hydro 83.1 4.4 0.00015 34.3 7.9 18 88-109 274-291 (751)
37 3iuj_A Prolyl endopeptidase; h 82.4 9.1 0.00031 31.8 9.5 28 87-118 236-266 (693)
38 1l0q_A Surface layer protein; 81.4 5.9 0.0002 29.2 7.3 29 87-119 76-104 (391)
39 3hfq_A Uncharacterized protein 80.6 4.8 0.00017 29.4 6.5 29 86-118 87-115 (347)
40 3sre_A PON1, serum paraoxonase 80.6 3.1 0.00011 32.8 5.7 34 81-118 217-250 (355)
41 3u4y_A Uncharacterized protein 75.9 17 0.00058 26.0 8.2 27 88-118 131-158 (331)
42 3u4y_A Uncharacterized protein 74.9 20 0.00069 25.5 8.6 30 88-121 276-305 (331)
43 3hfq_A Uncharacterized protein 72.7 11 0.00038 27.4 6.5 28 87-118 288-315 (347)
44 3scy_A Hypothetical bacterial 70.7 8.9 0.0003 28.2 5.6 27 88-118 262-289 (361)
45 3scy_A Hypothetical bacterial 70.5 9.3 0.00032 28.1 5.7 28 87-118 213-240 (361)
46 3bws_A Protein LP49; two-domai 70.4 9.9 0.00034 28.4 5.9 29 87-119 403-431 (433)
47 1l0q_A Surface layer protein; 69.2 25 0.00085 25.7 7.9 28 88-119 119-146 (391)
48 2ghs_A AGR_C_1268P; regucalcin 68.8 6.4 0.00022 29.2 4.5 29 85-117 179-207 (326)
49 1pby_B Quinohemoprotein amine 68.3 27 0.00092 24.6 7.7 26 88-118 283-308 (337)
50 3e5z_A Putative gluconolactona 68.1 7.3 0.00025 27.9 4.6 29 85-118 172-200 (296)
51 4h5i_A Guanine nucleotide-exch 64.5 25 0.00084 26.4 7.1 29 88-121 316-344 (365)
52 2ism_A Putative oxidoreductase 63.1 14 0.00047 28.2 5.5 50 35-95 36-85 (352)
53 1npe_A Nidogen, entactin; glyc 62.8 22 0.00077 25.1 6.3 66 35-117 127-195 (267)
54 2ism_A Putative oxidoreductase 62.5 18 0.00062 27.5 6.1 54 35-97 273-327 (352)
55 2mad_H Methylamine dehydrogena 60.6 42 0.0014 25.7 7.9 28 87-118 320-348 (373)
56 4gga_A P55CDC, cell division c 60.4 27 0.00092 26.4 6.7 59 35-119 119-177 (420)
57 3v64_C Agrin; beta propeller, 60.3 22 0.00075 27.0 6.2 64 35-115 164-229 (349)
58 1rwi_B Serine/threonine-protei 60.2 25 0.00084 24.3 6.1 67 35-119 197-263 (270)
59 3dr2_A Exported gluconolactona 60.1 15 0.0005 26.7 5.0 23 83-109 186-208 (305)
60 1jmx_B Amine dehydrogenase; ox 57.6 41 0.0014 23.8 7.0 26 88-118 298-323 (349)
61 3vgz_A Uncharacterized protein 57.4 46 0.0016 23.6 7.3 30 86-119 273-302 (353)
62 1ijq_A LDL receptor, low-densi 56.5 26 0.0009 25.9 6.0 64 35-115 125-190 (316)
63 3zwu_A Alkaline phosphatase PH 55.4 20 0.00067 30.3 5.6 18 32-49 477-495 (592)
64 1pby_B Quinohemoprotein amine 54.6 38 0.0013 23.7 6.4 27 88-118 37-63 (337)
65 4gq1_A NUP37; propeller, trans 54.3 28 0.00096 26.2 5.9 25 88-118 363-387 (393)
66 3hrp_A Uncharacterized protein 53.9 30 0.001 26.8 6.1 72 35-118 328-408 (409)
67 2dg1_A DRP35, lactonase; beta 53.7 27 0.00094 25.0 5.5 19 85-107 182-200 (333)
68 3v65_B Low-density lipoprotein 52.4 22 0.00076 27.3 5.1 64 35-115 207-272 (386)
69 3vgz_A Uncharacterized protein 52.4 60 0.002 23.0 7.8 28 87-118 91-118 (353)
70 4hw6_A Hypothetical protein, I 52.3 20 0.0007 28.2 4.9 70 38-118 352-431 (433)
71 3tc9_A Hypothetical hydrolase; 51.4 28 0.00096 27.3 5.6 66 35-116 231-297 (430)
72 4a9v_A PHOX; hydrolase, beta-p 50.5 41 0.0014 28.7 6.7 13 35-47 481-493 (592)
73 3fvz_A Peptidyl-glycine alpha- 49.9 48 0.0016 24.2 6.4 25 35-59 96-120 (329)
74 1jmx_B Amine dehydrogenase; ox 49.9 54 0.0018 23.1 6.6 27 88-118 46-72 (349)
75 2fp8_A Strictosidine synthase; 48.5 27 0.00093 25.4 4.9 33 83-119 183-215 (322)
76 2p9w_A MAL S 1 allergenic prot 47.5 27 0.00091 27.5 4.8 69 32-117 139-212 (334)
77 1pjx_A Dfpase, DIISOPROPYLFLUO 47.4 70 0.0024 22.4 7.2 67 35-118 231-297 (314)
78 3s25_A Hypothetical 7-bladed b 46.1 66 0.0023 24.1 6.8 16 88-107 107-122 (302)
79 4ggc_A P55CDC, cell division c 45.9 72 0.0025 22.1 6.7 30 28-57 30-61 (318)
80 3a9g_A Putative uncharacterize 45.7 63 0.0022 24.6 6.7 50 35-95 34-83 (354)
81 3sov_A LRP-6, low-density lipo 45.5 56 0.0019 24.5 6.3 64 35-115 127-192 (318)
82 1nr0_A Actin interacting prote 45.5 86 0.003 25.1 7.8 63 28-118 23-88 (611)
83 4ggc_A P55CDC, cell division c 44.7 76 0.0026 22.0 6.8 28 88-120 288-315 (318)
84 3fvz_A Peptidyl-glycine alpha- 44.6 50 0.0017 24.1 5.8 76 35-118 148-225 (329)
85 3hrp_A Uncharacterized protein 43.9 66 0.0022 24.8 6.6 57 34-97 271-335 (409)
86 1npe_A Nidogen, entactin; glyc 43.0 62 0.0021 22.7 5.9 25 35-59 41-66 (267)
87 3ia8_A THAP domain-containing 41.6 47 0.0016 23.4 4.9 30 83-116 64-94 (163)
88 2dg1_A DRP35, lactonase; beta 39.1 86 0.0029 22.3 6.3 63 35-109 238-300 (333)
89 3ei3_B DNA damage-binding prot 38.8 1.1E+02 0.0038 22.2 7.5 27 88-120 356-382 (383)
90 4gga_A P55CDC, cell division c 38.8 76 0.0026 23.8 6.1 27 88-119 368-394 (420)
91 3mmy_A MRNA export factor; mRN 38.4 64 0.0022 22.7 5.4 20 87-110 318-337 (368)
92 3v64_C Agrin; beta propeller, 38.3 83 0.0029 23.6 6.3 27 35-61 78-105 (349)
93 1ri6_A Putative isomerase YBHE 38.2 1E+02 0.0034 21.5 8.3 28 87-118 86-113 (343)
94 4hw6_A Hypothetical protein, I 35.7 67 0.0023 25.2 5.5 68 35-117 233-301 (433)
95 4aez_A CDC20, WD repeat-contai 35.3 1.3E+02 0.0046 22.1 7.9 58 35-119 107-164 (401)
96 3zwl_B Eukaryotic translation 33.9 1.2E+02 0.0041 21.2 6.3 27 88-119 78-104 (369)
97 3ow8_A WD repeat-containing pr 33.0 1.4E+02 0.0047 21.6 7.5 27 88-119 294-320 (321)
98 3i2n_A WD repeat-containing pr 32.9 37 0.0013 24.1 3.3 29 88-120 325-353 (357)
99 3v65_B Low-density lipoprotein 32.9 67 0.0023 24.6 5.0 27 35-61 121-148 (386)
100 2w18_A PALB2, fancn, partner a 32.6 1.5E+02 0.005 23.4 7.0 25 89-118 331-355 (356)
101 2a13_A AT1G79260; structural g 32.4 91 0.0031 21.8 5.3 50 55-114 49-101 (166)
102 1pjx_A Dfpase, DIISOPROPYLFLUO 32.1 38 0.0013 23.8 3.3 16 34-49 121-136 (314)
103 3sov_A LRP-6, low-density lipo 32.1 1.3E+02 0.0046 22.3 6.5 27 35-61 40-67 (318)
104 1ri6_A Putative isomerase YBHE 32.0 32 0.0011 24.2 2.9 28 87-118 40-67 (343)
105 2p4o_A Hypothetical protein; p 31.9 1.4E+02 0.0048 21.4 6.5 25 35-59 37-61 (306)
106 2g8s_A Glucose/sorbosone dehyd 31.9 1.3E+02 0.0045 22.6 6.5 68 35-118 276-350 (353)
107 1q7f_A NHL, brain tumor CG1071 30.9 1.2E+02 0.0041 21.0 5.8 23 35-57 126-148 (286)
108 1hks_A Heat-shock transcriptio 30.6 8.5 0.00029 25.2 -0.5 24 74-97 3-31 (106)
109 2pm9_A Protein WEB1, protein t 30.1 1.3E+02 0.0046 21.7 6.1 29 88-120 309-337 (416)
110 3bws_A Protein LP49; two-domai 29.2 1.7E+02 0.0058 21.4 6.6 29 87-119 214-242 (433)
111 3p5b_L Low density lipoprotein 28.6 1.8E+02 0.0062 22.3 6.9 26 35-60 207-234 (400)
112 1k8k_C P40, ARP2/3 complex 41 28.5 1.5E+02 0.005 21.0 6.0 26 88-118 56-81 (372)
113 3tc9_A Hypothetical hydrolase; 27.6 66 0.0023 25.1 4.2 68 40-118 351-428 (430)
114 4a11_B DNA excision repair pro 26.3 1.8E+02 0.0061 20.7 7.7 29 87-119 189-217 (408)
115 3s25_A Hypothetical 7-bladed b 26.2 2E+02 0.0069 21.3 7.2 16 91-110 59-74 (302)
116 2qe8_A Uncharacterized protein 25.8 1.9E+02 0.0067 21.0 7.0 21 87-111 197-217 (343)
117 2cxa_A Leucyl/phenylalanyl-tRN 25.5 23 0.00078 27.1 1.1 27 72-106 60-86 (256)
118 1n7d_A LDL receptor, low-densi 24.2 70 0.0024 26.9 4.0 23 83-109 538-560 (699)
119 1jof_A Carboxy-CIS,CIS-muconat 23.8 57 0.0019 24.1 3.0 26 88-117 196-221 (365)
120 1cru_A Protein (soluble quinop 23.8 1.4E+02 0.0048 23.6 5.5 58 40-111 368-426 (454)
121 2fr2_A Hypothetical protein RV 23.8 1.2E+02 0.0042 21.3 4.6 13 84-96 64-77 (172)
122 2pbi_B Guanine nucleotide-bind 23.3 1.7E+02 0.0057 21.4 5.6 18 88-109 330-347 (354)
123 1ijq_A LDL receptor, low-densi 23.2 1.9E+02 0.0065 21.1 5.9 26 35-60 35-61 (316)
124 3das_A Putative oxidoreductase 23.1 1.3E+02 0.0044 23.3 5.0 75 35-120 37-116 (347)
125 1gxr_A ESG1, transducin-like e 22.9 1.9E+02 0.0065 19.9 7.0 27 87-118 309-335 (337)
126 1jof_A Carboxy-CIS,CIS-muconat 21.9 65 0.0022 23.7 3.0 28 87-118 147-174 (365)
127 3p5b_L Low density lipoprotein 21.8 1.7E+02 0.006 22.3 5.6 26 35-60 117-143 (400)
128 1pgu_A Actin interacting prote 20.8 84 0.0029 24.2 3.5 28 88-121 22-49 (615)
129 1erj_A Transcriptional repress 20.3 2.6E+02 0.009 20.5 6.8 26 88-118 169-194 (393)
130 4g56_B MGC81050 protein; prote 20.2 2.3E+02 0.0078 20.7 5.8 27 88-118 273-299 (357)
131 3mkq_A Coatomer beta'-subunit; 20.0 2E+02 0.0068 23.2 5.8 64 29-120 19-86 (814)
No 1
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.63 E-value=2.3e-16 Score=133.52 Aligned_cols=83 Identities=20% Similarity=0.468 Sum_probs=74.9
Q ss_pred CCcceece---EEEEEeCCEEEEeCCCCCeeEEeccccCCcccCCCCeeeccCCccchhee-cccceEEecCCCCCCceE
Q psy3287 27 GIPSYVTQ---EEFSRYQGYWWQPKTTGSTQRLTFAHKGGRNLTDDPLAAGIPSYVTQEEF-SRYQGYWWQPKTTDGVYR 102 (122)
Q Consensus 27 Gv~~f~~~---~aFvr~~nLyv~~~~~~~~~rlT~~~~g~~~v~~~~i~~G~~d~v~eEE~-~~~~g~wWSPd~~~~~~~ 102 (122)
..+.|+|+ +||+++++||+.++.+|..+|||.++.. ..+++|.++|||+||+ ++..++||||||+ +
T Consensus 115 ~~~~~SPdG~~la~~~~~~i~~~~~~~~~~~~lt~~g~~------~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~----~ 184 (740)
T 4a5s_A 115 QWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYRITWTGKE------DIIYNGITDWVYEEEVFSAYSALWWSPNGT----F 184 (740)
T ss_dssp EEEEECSSTTCEEEEETTEEEEESSTTSCCEECCSCCBT------TTEEESBCCHHHHHHTSSSSBCEEECTTSS----E
T ss_pred eeeEECCCCCEEEEEECCeEEEEECCCCceEEEcCCCCc------cceecCcccccccchhcCCCcceEECCCCC----E
Confidence 35678887 9999999999999999999999998543 6799999999999995 9999999999999 9
Q ss_pred EEEEEEcCCcceeEECC
Q psy3287 103 ILYEEIDESDVKIYNFP 119 (122)
Q Consensus 103 iay~~~Des~V~~~~~~ 119 (122)
|||.++|++.|+.+.++
T Consensus 185 la~~~~d~~~v~~~~~~ 201 (740)
T 4a5s_A 185 LAYAQFNDTEVPLIEYS 201 (740)
T ss_dssp EEEEEEECTTCCEEEEE
T ss_pred EEEEEEcccCCceEEEE
Confidence 99999999999988764
No 2
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.32 E-value=6.8e-12 Score=103.86 Aligned_cols=82 Identities=21% Similarity=0.417 Sum_probs=71.9
Q ss_pred Ccceece---EEEEEeCCEEEEeCCCCCeeEEeccccCCcccCCCCeeeccCCccchhee-cccceEEecCCCCCCceEE
Q psy3287 28 IPSYVTQ---EEFSRYQGYWWQPKTTGSTQRLTFAHKGGRNLTDDPLAAGIPSYVTQEEF-SRYQGYWWQPKTTDGVYRI 103 (122)
Q Consensus 28 v~~f~~~---~aFvr~~nLyv~~~~~~~~~rlT~~~~g~~~v~~~~i~~G~~d~v~eEE~-~~~~g~wWSPd~~~~~~~i 103 (122)
.+.|+|+ ++|+.+++||+.++.++..++||..+.. ..+++|+++|||+||+ ++..+++|||||+ +|
T Consensus 118 ~~~~SPdG~~la~~~~~~i~~~~~~~g~~~~~~~~~~~------~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~----~l 187 (723)
T 1xfd_A 118 YAGWGPKGQQLIFIFENNIYYCAHVGKQAIRVVSTGKE------GVIYNGLSDWLYEEEILKTHIAHWWSPDGT----RL 187 (723)
T ss_dssp BCCBCSSTTCEEEEETTEEEEESSSSSCCEEEECCCBT------TTEEEEECCHHHHHTTSSSSEEEEECTTSS----EE
T ss_pred ccEECCCCCEEEEEECCeEEEEECCCCceEEEecCCCC------CceECcccceeEEEEeccCcceEEECCCCC----EE
Confidence 3667777 9999999999999999999999988443 5689999999999996 8889999999999 99
Q ss_pred EEEEEcCCcceeEECC
Q psy3287 104 LYEEIDESDVKIYNFP 119 (122)
Q Consensus 104 ay~~~Des~V~~~~~~ 119 (122)
||...|++.|+.+.++
T Consensus 188 a~~~~~~~~~~~~~~~ 203 (723)
T 1xfd_A 188 AYAAINDSRVPIMELP 203 (723)
T ss_dssp EEEEEECTTSCEEEEC
T ss_pred EEEEECCCccceEEee
Confidence 9999999888777653
No 3
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.30 E-value=2.4e-12 Score=107.10 Aligned_cols=81 Identities=17% Similarity=0.483 Sum_probs=71.7
Q ss_pred Ccceece---EEEEEeCCEEEEeCCCCCeeEEeccccCCcccCCCCeeeccCCccchhee-cccceEEecCCCCCCceEE
Q psy3287 28 IPSYVTQ---EEFSRYQGYWWQPKTTGSTQRLTFAHKGGRNLTDDPLAAGIPSYVTQEEF-SRYQGYWWQPKTTDGVYRI 103 (122)
Q Consensus 28 v~~f~~~---~aFvr~~nLyv~~~~~~~~~rlT~~~~g~~~v~~~~i~~G~~d~v~eEE~-~~~~g~wWSPd~~~~~~~i 103 (122)
.+.|+|+ ++|+.+++||+.++.++..++||.++.. ..+++|.++|||+||+ ++..+++|||||+ +|
T Consensus 114 ~~~~SPDG~~la~~~~~~i~~~~~~~g~~~~l~~~~~~------~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~----~l 183 (719)
T 1z68_A 114 YLCWSPVGSKLAYVYQNNIYLKQRPGDPPFQITFNGRE------NKIFNGIPDWVYEEEMLATKYALWWSPNGK----FL 183 (719)
T ss_dssp CEEECSSTTCEEEEETTEEEEESSTTSCCEECCCCCBT------TTEEESSCCHHHHHHTTCSSCCEEECTTSS----EE
T ss_pred cceECCCCCEEEEEECCeEEEEeCCCCCcEEEecCCCc------CCeEcccccceeeeecccCcccEEECCCCC----EE
Confidence 4678887 9999999999999999999999988443 5689999999999996 8889999999999 99
Q ss_pred EEEEEcCCcceeEEC
Q psy3287 104 LYEEIDESDVKIYNF 118 (122)
Q Consensus 104 ay~~~Des~V~~~~~ 118 (122)
||...|++.|+.+++
T Consensus 184 a~~~~d~~~~~~~~~ 198 (719)
T 1z68_A 184 AYAEFNDTDIPVIAY 198 (719)
T ss_dssp EEEEEECTTSCEEEE
T ss_pred EEEEECCCCCceEEe
Confidence 999999998886654
No 4
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.09 E-value=2.8e-10 Score=94.25 Aligned_cols=79 Identities=20% Similarity=0.319 Sum_probs=68.8
Q ss_pred Ccceece---EEEEEeCCEEEEeCCC-----CCeeEEeccccCCcccCCCCeeeccCCccchheecccceEEecCCCCCC
Q psy3287 28 IPSYVTQ---EEFSRYQGYWWQPKTT-----GSTQRLTFAHKGGRNLTDDPLAAGIPSYVTQEEFSRYQGYWWQPKTTDG 99 (122)
Q Consensus 28 v~~f~~~---~aFvr~~nLyv~~~~~-----~~~~rlT~~~~g~~~v~~~~i~~G~~d~v~eEE~~~~~g~wWSPd~~~~ 99 (122)
.+.|+++ ++|+++++||+.++.+ +..++++..+. ..+++|++ +++||+++..+++|||||+
T Consensus 125 ~~~~SpdG~~la~~~~~~i~v~~~~~~~~~~g~~~~~~~~~~-------~~~~~g~~--~~~ee~~~~~~~~~SpDg~-- 193 (706)
T 2z3z_A 125 SLDFSPVGDRVAYVRNHNLYIARGGKLGEGMSRAIAVTIDGT-------ETLVYGQA--VHQREFGIEKGTFWSPKGS-- 193 (706)
T ss_dssp TCEECTTSSEEEEEETTEEEEEECBCTTSCCCCCEESCSCCB-------TTEEESSC--CGGGCTTCCCSEEECTTSS--
T ss_pred CCcCCCCCCEEEEEECCeEEEEecCcccccCCCcEEeccCCC-------CCeEcccc--hhhhhcCCCceEEECCCCC--
Confidence 3566766 8999999999999998 88899988843 56999999 9999999999999999999
Q ss_pred ceEEEEEEEcCCcceeEECC
Q psy3287 100 VYRILYEEIDESDVKIYNFP 119 (122)
Q Consensus 100 ~~~iay~~~Des~V~~~~~~ 119 (122)
+|||..+|++.|+.+++.
T Consensus 194 --~la~~~~d~~~~~~~~~~ 211 (706)
T 2z3z_A 194 --CLAFYRMDQSMVKPTPIV 211 (706)
T ss_dssp --EEEEEEEECTTSCCEEEE
T ss_pred --EEEEEEECCCCCceEEee
Confidence 999999999988776653
No 5
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.97 E-value=8e-10 Score=91.86 Aligned_cols=77 Identities=31% Similarity=0.607 Sum_probs=67.8
Q ss_pred Ccceece---EEEEEeCCEEEEeCCCCCeeEEeccccCCcccCCCCeeeccCCccchheecccceEEecCCCCCCceEEE
Q psy3287 28 IPSYVTQ---EEFSRYQGYWWQPKTTGSTQRLTFAHKGGRNLTDDPLAAGIPSYVTQEEFSRYQGYWWQPKTTDGVYRIL 104 (122)
Q Consensus 28 v~~f~~~---~aFvr~~nLyv~~~~~~~~~rlT~~~~g~~~v~~~~i~~G~~d~v~eEE~~~~~g~wWSPd~~~~~~~ia 104 (122)
.+.|+++ ++|+.+++||+.++.++...+++..+. ..+.+|+++|+++||+.+..+++|||||+ +|+
T Consensus 156 ~~~~SPDG~~la~~~~~~i~~~d~~~g~~~~~~~~~~-------~~~~~g~~~~v~~~~~~~~~~~~~SpDg~----~l~ 224 (741)
T 2ecf_A 156 DAKLSPKGGFVSFIRGRNLWVIDLASGRQMQLTADGS-------TTIGNGIAEFVADEEMDRHTGYWWAPDDS----AIA 224 (741)
T ss_dssp EEEECTTSSEEEEEETTEEEEEETTTTEEEECCCCCC-------SSEEESCCCHHHHHHSCCCCSEEECTTSS----CEE
T ss_pred cccCCCCCCEEEEEeCCcEEEEecCCCCEEEeccCCc-------cceeccccceeeeeccccccceEECCCCC----EEE
Confidence 4567777 999999999999999998899988733 56899999999999999999999999999 999
Q ss_pred EEEEcCCccee
Q psy3287 105 YEEIDESDVKI 115 (122)
Q Consensus 105 y~~~Des~V~~ 115 (122)
|...|.+.++.
T Consensus 225 ~~~~d~~~~~~ 235 (741)
T 2ecf_A 225 YARIDESPVPV 235 (741)
T ss_dssp EEEEECTTSCE
T ss_pred EEEEcCCCCce
Confidence 99999876654
No 6
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=96.68 E-value=0.006 Score=45.35 Aligned_cols=52 Identities=17% Similarity=0.307 Sum_probs=39.1
Q ss_pred cceece---EEEEEeCC------EEEEeCCCCCeeEEeccccCCcccCCCCeeeccCCccchheecccceEEecCCCCCC
Q psy3287 29 PSYVTQ---EEFSRYQG------YWWQPKTTGSTQRLTFAHKGGRNLTDDPLAAGIPSYVTQEEFSRYQGYWWQPKTTDG 99 (122)
Q Consensus 29 ~~f~~~---~aFvr~~n------Lyv~~~~~~~~~rlT~~~~g~~~v~~~~i~~G~~d~v~eEE~~~~~g~wWSPd~~~~ 99 (122)
+.|+|+ ++|+...+ ||+.++.+++.++|+.. + . ...+.|||||+
T Consensus 64 ~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~--~------~-----------------~~~~~wspdg~-- 116 (347)
T 2gop_A 64 PRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEA--K------N-----------------IRSLEWNEDSR-- 116 (347)
T ss_dssp EEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEE--S------E-----------------EEEEEECTTSS--
T ss_pred eEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcC--C------C-----------------ccceeECCCCC--
Confidence 566666 88887543 99999888877777654 2 0 24678999999
Q ss_pred ceEEEEEEEc
Q psy3287 100 VYRILYEEID 109 (122)
Q Consensus 100 ~~~iay~~~D 109 (122)
+|+|...+
T Consensus 117 --~l~~~~~~ 124 (347)
T 2gop_A 117 --KLLIVGFK 124 (347)
T ss_dssp --EEEEEEEC
T ss_pred --EEEEEEcc
Confidence 99999875
No 7
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=96.54 E-value=0.011 Score=44.52 Aligned_cols=54 Identities=17% Similarity=0.257 Sum_probs=39.7
Q ss_pred cceece---EEEEEe-CC---EEEEeCCCCCeeEEeccccCCcccCCCCeeeccCCccchheecccceEEecCCCCCCce
Q psy3287 29 PSYVTQ---EEFSRY-QG---YWWQPKTTGSTQRLTFAHKGGRNLTDDPLAAGIPSYVTQEEFSRYQGYWWQPKTTDGVY 101 (122)
Q Consensus 29 ~~f~~~---~aFvr~-~n---Lyv~~~~~~~~~rlT~~~~g~~~v~~~~i~~G~~d~v~eEE~~~~~g~wWSPd~~~~~~ 101 (122)
+.|+++ ++|..+ ++ ||+.++.+++.++||...... ..+..|||||+
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~-----------------------~~~~~~spdg~---- 93 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDN-----------------------TFGGFLSPDDD---- 93 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBC-----------------------SSSCEECTTSS----
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCC-----------------------ccceEEcCCCC----
Confidence 567776 889886 44 999999999888888652210 11235999999
Q ss_pred EEEEEEEc
Q psy3287 102 RILYEEID 109 (122)
Q Consensus 102 ~iay~~~D 109 (122)
+|+|..-|
T Consensus 94 ~l~~~~~~ 101 (388)
T 3pe7_A 94 ALFYVKDG 101 (388)
T ss_dssp EEEEEETT
T ss_pred EEEEEeCC
Confidence 99998854
No 8
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=96.44 E-value=0.012 Score=43.97 Aligned_cols=56 Identities=13% Similarity=0.115 Sum_probs=39.9
Q ss_pred Ccceece---EEEEEeC----CEEEEeCCCCCeeEEeccccCCcccCCCCeeeccCCccchheecccceEEecCCCCCCc
Q psy3287 28 IPSYVTQ---EEFSRYQ----GYWWQPKTTGSTQRLTFAHKGGRNLTDDPLAAGIPSYVTQEEFSRYQGYWWQPKTTDGV 100 (122)
Q Consensus 28 v~~f~~~---~aFvr~~----nLyv~~~~~~~~~rlT~~~~g~~~v~~~~i~~G~~d~v~eEE~~~~~g~wWSPd~~~~~ 100 (122)
-+.|+++ ++|+.+. +||+.++.+++.++|+..... ...+..|||||+
T Consensus 40 ~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~-----------------------~~~~~~~spdg~--- 93 (396)
T 3c5m_A 40 QKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGD-----------------------NTFGGFISTDER--- 93 (396)
T ss_dssp SCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCB-----------------------CTTTCEECTTSS---
T ss_pred cCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCC-----------------------ccccceECCCCC---
Confidence 4566666 8898765 799999888877777654110 123367999999
Q ss_pred eEEEEEEEcC
Q psy3287 101 YRILYEEIDE 110 (122)
Q Consensus 101 ~~iay~~~De 110 (122)
+|+|...+.
T Consensus 94 -~l~~~~~~~ 102 (396)
T 3c5m_A 94 -AFFYVKNEL 102 (396)
T ss_dssp -EEEEEETTT
T ss_pred -EEEEEEcCC
Confidence 999988664
No 9
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=96.17 E-value=0.021 Score=42.92 Aligned_cols=74 Identities=14% Similarity=0.282 Sum_probs=46.1
Q ss_pred CCCceeeeeecCCCCCCCCCCCCCCCCcceec-e---EEEEEeC-------CEEEEeCCCCCeeEEeccccCCcccCCCC
Q psy3287 2 VLGSTQRLTFAHKGGRNLTDDPLAAGIPSYVT-Q---EEFSRYQ-------GYWWQPKTTGSTQRLTFAHKGGRNLTDDP 70 (122)
Q Consensus 2 ~~~~~~rlt~~~~~~~~~~~~~~~~Gv~~f~~-~---~aFvr~~-------nLyv~~~~~~~~~rlT~~~~g~~~v~~~~ 70 (122)
.+|+.++|+... .....+.|++ + ++|+... .||+.+..++..++|+....+
T Consensus 176 ~~g~~~~l~~~~----------~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~-------- 237 (388)
T 3pe7_A 176 KTGESTVILQEN----------QWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEG-------- 237 (388)
T ss_dssp TTCCEEEEEEES----------SCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTT--------
T ss_pred CCCceEEeecCC----------ccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCC--------
Confidence 456666666432 1123466777 5 8888753 789888776666666543111
Q ss_pred eeeccCCccchheecccceEEecCCCCCCceEEEEEEEcCC
Q psy3287 71 LAAGIPSYVTQEEFSRYQGYWWQPKTTDGVYRILYEEIDES 111 (122)
Q Consensus 71 i~~G~~d~v~eEE~~~~~g~wWSPd~~~~~~~iay~~~Des 111 (122)
.......|||||+ +|+|...+..
T Consensus 238 --------------~~~~~~~~spdg~----~l~~~~~~~~ 260 (388)
T 3pe7_A 238 --------------ESCTHEFWVPDGS----ALVYVSYLKG 260 (388)
T ss_dssp --------------EEEEEEEECTTSS----CEEEEEEETT
T ss_pred --------------cccccceECCCCC----EEEEEecCCC
Confidence 0012346999999 9999877544
No 10
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=95.71 E-value=0.025 Score=47.56 Aligned_cols=72 Identities=13% Similarity=0.015 Sum_probs=45.9
Q ss_pred CCCceeeeeecCCCCCCCCCCCCCCCC--cceece---EEEEEe----------CCEEEEeCCCCCeeEEeccccCCccc
Q psy3287 2 VLGSTQRLTFAHKGGRNLTDDPLAAGI--PSYVTQ---EEFSRY----------QGYWWQPKTTGSTQRLTFAHKGGRNL 66 (122)
Q Consensus 2 ~~~~~~rlt~~~~~~~~~~~~~~~~Gv--~~f~~~---~aFvr~----------~nLyv~~~~~~~~~rlT~~~~g~~~v 66 (122)
.||+.++|...+.. ....... ..++|+ ++|..+ +++|+.++.+|+.++|+.. .
T Consensus 44 ~~~~~~~~~~~~~~------~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~l~~~--~---- 111 (740)
T 4a5s_A 44 EYGNSSVFLENSTF------DEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEERI--P---- 111 (740)
T ss_dssp TTCCEEEEECTTTT------TTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC--C----
T ss_pred CCCceEEEEechhh------hhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEEcccC--C----
Confidence 46776666554431 1111111 456777 788877 7899999988876666532 1
Q ss_pred CCCCeeeccCCccchheecccceEEecCCCCCCceEEEEEE
Q psy3287 67 TDDPLAAGIPSYVTQEEFSRYQGYWWQPKTTDGVYRILYEE 107 (122)
Q Consensus 67 ~~~~i~~G~~d~v~eEE~~~~~g~wWSPd~~~~~~~iay~~ 107 (122)
. .....-|||||+ +|||..
T Consensus 112 --~----------------~~~~~~~SPdG~----~la~~~ 130 (740)
T 4a5s_A 112 --N----------------NTQWVTWSPVGH----KLAYVW 130 (740)
T ss_dssp --T----------------TEEEEEECSSTT----CEEEEE
T ss_pred --C----------------cceeeEECCCCC----EEEEEE
Confidence 0 123446999999 999984
No 11
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=95.55 E-value=0.058 Score=44.43 Aligned_cols=62 Identities=8% Similarity=-0.015 Sum_probs=43.1
Q ss_pred CCcceece---EEEEEeCCEEEEeCCCC---CeeEEeccccCCcccCCCCeeeccCCccchheecccceEEecCCCCCCc
Q psy3287 27 GIPSYVTQ---EEFSRYQGYWWQPKTTG---STQRLTFAHKGGRNLTDDPLAAGIPSYVTQEEFSRYQGYWWQPKTTDGV 100 (122)
Q Consensus 27 Gv~~f~~~---~aFvr~~nLyv~~~~~~---~~~rlT~~~~g~~~v~~~~i~~G~~d~v~eEE~~~~~g~wWSPd~~~~~ 100 (122)
.-+.|+++ ++|..++.||+.++.++ ..++|+.. + ..-...-|||||+
T Consensus 112 ~~~~~SpDg~~l~~~~~~~i~~~d~~~~~~~~~~~l~~~--~----------------------~~~~~~~~SPDG~--- 164 (741)
T 2ecf_A 112 VDYQWSPDAQRLLFPLGGELYLYDLKQEGKAAVRQLTHG--E----------------------GFATDAKLSPKGG--- 164 (741)
T ss_dssp CCCEECTTSSEEEEEETTEEEEEESSSCSTTSCCBCCCS--S----------------------SCEEEEEECTTSS---
T ss_pred ceeEECCCCCEEEEEeCCcEEEEECCCCCcceEEEcccC--C----------------------cccccccCCCCCC---
Confidence 35677777 88888899999998877 55555433 1 1124567999999
Q ss_pred eEEEEEEEcCCcceeEEC
Q psy3287 101 YRILYEEIDESDVKIYNF 118 (122)
Q Consensus 101 ~~iay~~~Des~V~~~~~ 118 (122)
+|||..- ..|..+.+
T Consensus 165 -~la~~~~--~~i~~~d~ 179 (741)
T 2ecf_A 165 -FVSFIRG--RNLWVIDL 179 (741)
T ss_dssp -EEEEEET--TEEEEEET
T ss_pred -EEEEEeC--CcEEEEec
Confidence 9999873 34555544
No 12
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=95.38 E-value=0.036 Score=48.42 Aligned_cols=53 Identities=15% Similarity=0.210 Sum_probs=41.8
Q ss_pred cceece-EEEEEeCCEEEEeCCCCCeeEEeccccCCcccCCCCeeeccCCccchheecccceEEecCCCCCCceEEEEEE
Q psy3287 29 PSYVTQ-EEFSRYQGYWWQPKTTGSTQRLTFAHKGGRNLTDDPLAAGIPSYVTQEEFSRYQGYWWQPKTTDGVYRILYEE 107 (122)
Q Consensus 29 ~~f~~~-~aFvr~~nLyv~~~~~~~~~rlT~~~~g~~~v~~~~i~~G~~d~v~eEE~~~~~g~wWSPd~~~~~~~iay~~ 107 (122)
+.++++ ++|+..++||+.++.+|..++||.. . ..-....|||||+ +|||..
T Consensus 20 ~~~S~~~iaf~~~~~l~~~~~~gg~~~~lt~~--~----------------------~~v~~~~~SPDG~----~la~~s 71 (1045)
T 1k32_A 20 PDIHGDRIIFVCCDDLWEHDLKSGSTRKIVSN--L----------------------GVINNARFFPDGR----KIAIRV 71 (1045)
T ss_dssp EEEETTEEEEEETTEEEEEETTTCCEEEEECS--S----------------------SEEEEEEECTTSS----EEEEEE
T ss_pred cEEeCCEEEEEECCcEEEEECCCCcEEEeeeC--C----------------------CcccCeEECCCCC----EEEEEE
Confidence 455555 9999999999999998988888754 1 1124567999999 999998
Q ss_pred Ec
Q psy3287 108 ID 109 (122)
Q Consensus 108 ~D 109 (122)
.+
T Consensus 72 ~~ 73 (1045)
T 1k32_A 72 MR 73 (1045)
T ss_dssp EE
T ss_pred ee
Confidence 76
No 13
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=94.97 E-value=0.03 Score=45.67 Aligned_cols=55 Identities=13% Similarity=0.020 Sum_probs=36.6
Q ss_pred Ccceece---EEEEEe-----------CCEEEEeCCC------CCeeEEe-ccccCCcccCCCCeeeccCCccchheecc
Q psy3287 28 IPSYVTQ---EEFSRY-----------QGYWWQPKTT------GSTQRLT-FAHKGGRNLTDDPLAAGIPSYVTQEEFSR 86 (122)
Q Consensus 28 v~~f~~~---~aFvr~-----------~nLyv~~~~~------~~~~rlT-~~~~g~~~v~~~~i~~G~~d~v~eEE~~~ 86 (122)
.+.|+++ ++|+.. ..||+.++.+ +..++|+ .. . ..
T Consensus 134 ~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~--~----------------------~~ 189 (662)
T 3azo_A 134 DPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDA--H----------------------RF 189 (662)
T ss_dssp EEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSC--S----------------------SE
T ss_pred CcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEecC--C----------------------Cc
Confidence 4566766 777765 3788888776 5555554 22 0 11
Q ss_pred cceEEecCCCCCCceEEEEEEEcC
Q psy3287 87 YQGYWWQPKTTDGVYRILYEEIDE 110 (122)
Q Consensus 87 ~~g~wWSPd~~~~~~~iay~~~De 110 (122)
.....|||||+ +|+|...|.
T Consensus 190 ~~~~~~SpDG~----~la~~~~~~ 209 (662)
T 3azo_A 190 VTGPRLSPDGR----QAVWLAWDH 209 (662)
T ss_dssp ECCCEECTTSS----EEEEEEECT
T ss_pred ccCceECCCCC----EEEEEECCC
Confidence 23456999999 999999875
No 14
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=94.77 E-value=0.094 Score=41.01 Aligned_cols=62 Identities=16% Similarity=0.226 Sum_probs=38.9
Q ss_pred cceece---EEEEEeC----CEEEEeCCCCCeeEEeccccCCcccCCCCeeeccCCccchheecccceEEecCCCCCCce
Q psy3287 29 PSYVTQ---EEFSRYQ----GYWWQPKTTGSTQRLTFAHKGGRNLTDDPLAAGIPSYVTQEEFSRYQGYWWQPKTTDGVY 101 (122)
Q Consensus 29 ~~f~~~---~aFvr~~----nLyv~~~~~~~~~rlT~~~~g~~~v~~~~i~~G~~d~v~eEE~~~~~g~wWSPd~~~~~~ 101 (122)
+.|+++ ++|..+. .||+.++.++...+++.. + .......|||||+
T Consensus 272 ~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~~--~----------------------~~~~~~~~spdG~---- 323 (415)
T 2hqs_A 272 PTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWE--G----------------------SQNQDADVSSDGK---- 323 (415)
T ss_dssp EEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCS--S----------------------SEEEEEEECTTSS----
T ss_pred eEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEecC--C----------------------CcccCeEECCCCC----
Confidence 445555 6666653 477777776665555443 1 0123567999999
Q ss_pred EEEEEEEcCC--cceeEEC
Q psy3287 102 RILYEEIDES--DVKIYNF 118 (122)
Q Consensus 102 ~iay~~~Des--~V~~~~~ 118 (122)
+|++...+.. .|..+.+
T Consensus 324 ~l~~~~~~~g~~~i~~~d~ 342 (415)
T 2hqs_A 324 FMVMVSSNGGQQHIAKQDL 342 (415)
T ss_dssp EEEEEEECSSCEEEEEEET
T ss_pred EEEEEECcCCceEEEEEEC
Confidence 9999988743 4554443
No 15
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=94.70 E-value=0.061 Score=44.07 Aligned_cols=56 Identities=18% Similarity=0.156 Sum_probs=36.8
Q ss_pred Ccceece---EEEEEe----------CCEEEEeCCCCCeeEEeccccCCcccCCCCeeeccCCccchheecccceEEecC
Q psy3287 28 IPSYVTQ---EEFSRY----------QGYWWQPKTTGSTQRLTFAHKGGRNLTDDPLAAGIPSYVTQEEFSRYQGYWWQP 94 (122)
Q Consensus 28 v~~f~~~---~aFvr~----------~nLyv~~~~~~~~~rlT~~~~g~~~v~~~~i~~G~~d~v~eEE~~~~~g~wWSP 94 (122)
-+.|+++ ++|..+ +.||+.++.++..++|+...... ..-...-|||
T Consensus 65 ~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~---------------------~~~~~~~~SP 123 (723)
T 1xfd_A 65 RYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSN---------------------AKLQYAGWGP 123 (723)
T ss_dssp EEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCS---------------------CCCSBCCBCS
T ss_pred eEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCcccc---------------------ccccccEECC
Confidence 3556766 777764 67888888887766665431110 0123456999
Q ss_pred CCCCCceEEEEEEE
Q psy3287 95 KTTDGVYRILYEEI 108 (122)
Q Consensus 95 d~~~~~~~iay~~~ 108 (122)
||+ +|||..-
T Consensus 124 dG~----~la~~~~ 133 (723)
T 1xfd_A 124 KGQ----QLIFIFE 133 (723)
T ss_dssp STT----CEEEEET
T ss_pred CCC----EEEEEEC
Confidence 999 9999864
No 16
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=94.67 E-value=0.13 Score=40.20 Aligned_cols=57 Identities=12% Similarity=0.239 Sum_probs=37.3
Q ss_pred Ccceece---EEEEE----eCCEEEEeCCCCCeeEEeccccCCcccCCCCeeeccCCccchheecccceEEecCCCCCCc
Q psy3287 28 IPSYVTQ---EEFSR----YQGYWWQPKTTGSTQRLTFAHKGGRNLTDDPLAAGIPSYVTQEEFSRYQGYWWQPKTTDGV 100 (122)
Q Consensus 28 v~~f~~~---~aFvr----~~nLyv~~~~~~~~~rlT~~~~g~~~v~~~~i~~G~~d~v~eEE~~~~~g~wWSPd~~~~~ 100 (122)
-+.|+++ ++|.. +.+||+.++.++..++|+.. . .......|||||+
T Consensus 227 ~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~--~----------------------~~~~~~~~spdg~--- 279 (415)
T 2hqs_A 227 APAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDG--R----------------------SNNTEPTWFPDSQ--- 279 (415)
T ss_dssp EEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCCC--S----------------------SCEEEEEECTTSS---
T ss_pred CEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCcCC--C----------------------CcccceEECCCCC---
Confidence 3456665 67665 23488888877776665433 1 1124568999999
Q ss_pred eEEEEEEEcCCc
Q psy3287 101 YRILYEEIDESD 112 (122)
Q Consensus 101 ~~iay~~~Des~ 112 (122)
+|+|..-+...
T Consensus 280 -~l~~~s~~~g~ 290 (415)
T 2hqs_A 280 -NLAFTSDQAGR 290 (415)
T ss_dssp -EEEEEECTTSS
T ss_pred -EEEEEECCCCC
Confidence 99998865543
No 17
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=94.62 E-value=0.086 Score=43.95 Aligned_cols=56 Identities=4% Similarity=0.074 Sum_probs=40.5
Q ss_pred Ccceece---EEEEEeC------CEEEEeCCCCCeeEEeccccCCcccCCCCeeeccCCccchheecccceEEecCCCCC
Q psy3287 28 IPSYVTQ---EEFSRYQ------GYWWQPKTTGSTQRLTFAHKGGRNLTDDPLAAGIPSYVTQEEFSRYQGYWWQPKTTD 98 (122)
Q Consensus 28 v~~f~~~---~aFvr~~------nLyv~~~~~~~~~rlT~~~~g~~~v~~~~i~~G~~d~v~eEE~~~~~g~wWSPd~~~ 98 (122)
-+.++++ ++|..+. .||+.++.+|+..+++..+. ...++.|||||+
T Consensus 129 ~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~------------------------~~~~~~wspDg~- 183 (710)
T 2xdw_A 129 GYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERV------------------------KFSCMAWTHDGK- 183 (710)
T ss_dssp EEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEE------------------------CSCCEEECTTSS-
T ss_pred EEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCc------------------------ccceEEEEeCCC-
Confidence 4567776 7887653 68888888887666544411 135678999999
Q ss_pred CceEEEEEEEcCC
Q psy3287 99 GVYRILYEEIDES 111 (122)
Q Consensus 99 ~~~~iay~~~Des 111 (122)
.|+|...|..
T Consensus 184 ---~l~~~~~~~~ 193 (710)
T 2xdw_A 184 ---GMFYNAYPQQ 193 (710)
T ss_dssp ---EEEEEECCCC
T ss_pred ---EEEEEEECCc
Confidence 9999998865
No 18
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=94.54 E-value=0.038 Score=45.56 Aligned_cols=78 Identities=12% Similarity=0.161 Sum_probs=46.3
Q ss_pred CCCceeeeeecCCCCCCCCCCCCCCCCcceece---EEEEEe----------CCEEEEeCCCCCe---eEEeccccCCcc
Q psy3287 2 VLGSTQRLTFAHKGGRNLTDDPLAAGIPSYVTQ---EEFSRY----------QGYWWQPKTTGST---QRLTFAHKGGRN 65 (122)
Q Consensus 2 ~~~~~~rlt~~~~~~~~~~~~~~~~Gv~~f~~~---~aFvr~----------~nLyv~~~~~~~~---~rlT~~~~g~~~ 65 (122)
.+|+.++|+..+.. ....-..+.|+++ ++|..+ +.||+.++.+++. ++|+
T Consensus 44 ~~g~~~~~~~~~~~------~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l~-------- 109 (719)
T 1z68_A 44 ETGQSYTILSNRTM------KSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNELP-------- 109 (719)
T ss_dssp SSCCEEEEECHHHH------HTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCC--------
T ss_pred CCCcEEEEEccccc------cccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceecC--------
Confidence 45666666654321 0011234556666 777754 7899998877754 3221
Q ss_pred cCCCCeeeccCCccchheecccceEEecCCCCCCceEEEEEEEcCCcceeEEC
Q psy3287 66 LTDDPLAAGIPSYVTQEEFSRYQGYWWQPKTTDGVYRILYEEIDESDVKIYNF 118 (122)
Q Consensus 66 v~~~~i~~G~~d~v~eEE~~~~~g~wWSPd~~~~~~~iay~~~Des~V~~~~~ 118 (122)
..-...-|||||+ +|||.. +..|..+.+
T Consensus 110 -------------------~~~~~~~~SPDG~----~la~~~--~~~i~~~~~ 137 (719)
T 1z68_A 110 -------------------RPIQYLCWSPVGS----KLAYVY--QNNIYLKQR 137 (719)
T ss_dssp -------------------SSBCCEEECSSTT----CEEEEE--TTEEEEESS
T ss_pred -------------------cccccceECCCCC----EEEEEE--CCeEEEEeC
Confidence 0124467999999 999985 345554443
No 19
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=94.36 E-value=0.095 Score=44.67 Aligned_cols=57 Identities=19% Similarity=0.212 Sum_probs=38.9
Q ss_pred CCccee-ce---EEEEEeCC------EEEEeCCCC-CeeEEeccccCCcccCCCCeeeccCCccchheecccceEEecCC
Q psy3287 27 GIPSYV-TQ---EEFSRYQG------YWWQPKTTG-STQRLTFAHKGGRNLTDDPLAAGIPSYVTQEEFSRYQGYWWQPK 95 (122)
Q Consensus 27 Gv~~f~-~~---~aFvr~~n------Lyv~~~~~~-~~~rlT~~~~g~~~v~~~~i~~G~~d~v~eEE~~~~~g~wWSPd 95 (122)
+-+.++ ++ +||+.+.+ ||+.++.+| +. + . ..+. ....++.||||
T Consensus 177 ~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~--l--~---------~~~~------------~~~~~~~WspD 231 (751)
T 2xe4_A 177 MEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQT--I--A---------DKVS------------GTNGEIVWGPD 231 (751)
T ss_dssp EEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCC--C--C---------CCEE------------EECSCCEECSS
T ss_pred eeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEe--C--C---------cccc------------CceeeEEEecC
Confidence 456778 77 88888753 888888776 41 1 0 1111 11357889999
Q ss_pred CCCCceEEEEEEEcCCc
Q psy3287 96 TTDGVYRILYEEIDESD 112 (122)
Q Consensus 96 ~~~~~~~iay~~~Des~ 112 (122)
|+ +|+|.+.|++.
T Consensus 232 g~----~l~y~~~d~~~ 244 (751)
T 2xe4_A 232 HT----SLFYVTKDETL 244 (751)
T ss_dssp TT----EEEEEEECTTC
T ss_pred CC----EEEEEEECCCC
Confidence 99 99999998753
No 20
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=94.25 E-value=0.38 Score=33.59 Aligned_cols=26 Identities=23% Similarity=0.387 Sum_probs=19.3
Q ss_pred ceEEecCCCCCCceEEEEEEEcCCcceeEE
Q psy3287 88 QGYWWQPKTTDGVYRILYEEIDESDVKIYN 117 (122)
Q Consensus 88 ~g~wWSPd~~~~~~~iay~~~Des~V~~~~ 117 (122)
..+.||||++ +|+|....+..+..+.
T Consensus 132 ~~~~~spdg~----~l~~~~~~~~~~~l~~ 157 (297)
T 2ojh_A 132 YWHGWSPDGK----SFTYCGIRDQVFDIYS 157 (297)
T ss_dssp EEEEECTTSS----EEEEEEEETTEEEEEE
T ss_pred cceEECCCCC----EEEEEECCCCceEEEE
Confidence 3457999999 9998776666565554
No 21
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=93.91 E-value=0.22 Score=34.85 Aligned_cols=50 Identities=6% Similarity=-0.109 Sum_probs=33.9
Q ss_pred EEEEEeCCEEEEeCCC-CCeeEEeccccCCcccCCCCeeeccCCccchheecccceEEecCCCCCCceEEEEEEEcC
Q psy3287 35 EEFSRYQGYWWQPKTT-GSTQRLTFAHKGGRNLTDDPLAAGIPSYVTQEEFSRYQGYWWQPKTTDGVYRILYEEIDE 110 (122)
Q Consensus 35 ~aFvr~~nLyv~~~~~-~~~~rlT~~~~g~~~v~~~~i~~G~~d~v~eEE~~~~~g~wWSPd~~~~~~~iay~~~De 110 (122)
+++..++.|++.++.+ +...+++..... .....+.||||++ +|++...+.
T Consensus 56 l~~~~~~~i~~~d~~~~~~~~~~~~~~~~----------------------~~~~~~~~spdg~----~l~~~~~~~ 106 (297)
T 2ojh_A 56 LLLNSEGLLYRLSLAGDPSPEKVDTGFAT----------------------ICNNDHGISPDGA----LYAISDKVE 106 (297)
T ss_dssp EEEEETTEEEEEESSSCCSCEECCCTTCC----------------------CBCSCCEECTTSS----EEEEEECTT
T ss_pred EEEEcCCeEEEEeCCCCCCceEecccccc----------------------ccccceEECCCCC----EEEEEEeCC
Confidence 7777888888888877 665555432110 1234567999999 999988553
No 22
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=93.68 E-value=0.2 Score=36.86 Aligned_cols=39 Identities=8% Similarity=0.027 Sum_probs=28.4
Q ss_pred eCCEEEEeCCCCCeeEEeccccCCcccCCCCeeeccCCccchheecccceEEecCCCCCCceEEEEEEEcC
Q psy3287 40 YQGYWWQPKTTGSTQRLTFAHKGGRNLTDDPLAAGIPSYVTQEEFSRYQGYWWQPKTTDGVYRILYEEIDE 110 (122)
Q Consensus 40 ~~nLyv~~~~~~~~~rlT~~~~g~~~v~~~~i~~G~~d~v~eEE~~~~~g~wWSPd~~~~~~~iay~~~De 110 (122)
.++||+.++.+++.++| . ......|||||+ +|||...+.
T Consensus 42 ~~~l~~~d~~~~~~~~l--~--------------------------~~~~~~~SpDg~----~la~~~~~~ 80 (347)
T 2gop_A 42 ENTIVIENLKNNARRFI--E--------------------------NATMPRISPDGK----KIAFMRANE 80 (347)
T ss_dssp EEEEEEEETTTCCEEEE--E--------------------------SCEEEEECTTSS----EEEEEEEET
T ss_pred cceEEEEeCCCCceEEc--c--------------------------cCCCeEECCCCC----EEEEEEecc
Confidence 56688888777766555 1 124567999999 999998764
No 23
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=93.37 E-value=0.31 Score=39.18 Aligned_cols=50 Identities=4% Similarity=-0.130 Sum_probs=33.5
Q ss_pred CCcceece---EEEEE-e----CCEEEEeCCCCCeeEEeccccCCcccCCCCeeeccCCccchheecccceEEecCCCCC
Q psy3287 27 GIPSYVTQ---EEFSR-Y----QGYWWQPKTTGSTQRLTFAHKGGRNLTDDPLAAGIPSYVTQEEFSRYQGYWWQPKTTD 98 (122)
Q Consensus 27 Gv~~f~~~---~aFvr-~----~nLyv~~~~~~~~~rlT~~~~g~~~v~~~~i~~G~~d~v~eEE~~~~~g~wWSPd~~~ 98 (122)
..+.|+++ ++|.. + ..||+.++.+|+.++|+.. . +.....-|||||+
T Consensus 153 ~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~~--~----------------------~~~~~~~~SpDG~- 207 (582)
T 3o4h_A 153 FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDSG--E----------------------GSFSSASISPGMK- 207 (582)
T ss_dssp CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEECCS--S----------------------CEEEEEEECTTSC-
T ss_pred ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEeecC--C----------------------CccccceECCCCC-
Confidence 34556676 66554 3 4699999888887777543 1 0124567999999
Q ss_pred CceEEE
Q psy3287 99 GVYRIL 104 (122)
Q Consensus 99 ~~~~ia 104 (122)
+|+
T Consensus 208 ---~l~ 210 (582)
T 3o4h_A 208 ---VTA 210 (582)
T ss_dssp ---EEE
T ss_pred ---EEE
Confidence 888
No 24
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=93.11 E-value=0.41 Score=39.20 Aligned_cols=19 Identities=16% Similarity=0.502 Sum_probs=16.1
Q ss_pred ceEEecCCCCCCceEEEEEEEcC
Q psy3287 88 QGYWWQPKTTDGVYRILYEEIDE 110 (122)
Q Consensus 88 ~g~wWSPd~~~~~~~iay~~~De 110 (122)
..+.|||||+ +|++...|.
T Consensus 261 ~~~~~spdg~----~l~~~~~~~ 279 (706)
T 2z3z_A 261 TNLSWSPDEN----ILYVAEVNR 279 (706)
T ss_dssp EEEEECTTSS----EEEEEEECT
T ss_pred eeEEEECCCC----EEEEEEeCC
Confidence 4568999999 999988775
No 25
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=92.72 E-value=0.51 Score=41.14 Aligned_cols=55 Identities=7% Similarity=-0.083 Sum_probs=37.7
Q ss_pred cceece---EEEEE-eCCEEEEeCCCCCeeEEeccccCCcccCCCCeeeccCCccchheecccceEEecCCCCCCceEEE
Q psy3287 29 PSYVTQ---EEFSR-YQGYWWQPKTTGSTQRLTFAHKGGRNLTDDPLAAGIPSYVTQEEFSRYQGYWWQPKTTDGVYRIL 104 (122)
Q Consensus 29 ~~f~~~---~aFvr-~~nLyv~~~~~~~~~rlT~~~~g~~~v~~~~i~~G~~d~v~eEE~~~~~g~wWSPd~~~~~~~ia 104 (122)
+.|+++ ++|.. ++.|++.++.+++.++++..+.+ ....+.|||||+ +||
T Consensus 384 ~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~-----------------------~v~~~~~SpDG~----~la 436 (1045)
T 1k32_A 384 MGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREA-----------------------MITDFTISDNSR----FIA 436 (1045)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSS-----------------------CCCCEEECTTSC----EEE
T ss_pred eEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCC-----------------------CccceEECCCCC----eEE
Confidence 455555 55554 34788888888877777644221 124567999999 999
Q ss_pred EEEEcC
Q psy3287 105 YEEIDE 110 (122)
Q Consensus 105 y~~~De 110 (122)
+...+.
T Consensus 437 ~~~~~~ 442 (1045)
T 1k32_A 437 YGFPLK 442 (1045)
T ss_dssp EEEEEC
T ss_pred EEecCc
Confidence 998765
No 26
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=91.92 E-value=0.5 Score=38.31 Aligned_cols=53 Identities=13% Similarity=0.010 Sum_probs=35.9
Q ss_pred EEEEE--eCCEEEEeCC--C-CCeeEEeccccCCcccCCCCeeeccCCccchheecccceEEecCCCCCCceEEEEEEEc
Q psy3287 35 EEFSR--YQGYWWQPKT--T-GSTQRLTFAHKGGRNLTDDPLAAGIPSYVTQEEFSRYQGYWWQPKTTDGVYRILYEEID 109 (122)
Q Consensus 35 ~aFvr--~~nLyv~~~~--~-~~~~rlT~~~~g~~~v~~~~i~~G~~d~v~eEE~~~~~g~wWSPd~~~~~~~iay~~~D 109 (122)
++|.. +.+||+.++. + +..++||...... .-.+.....|||||+ +|+|...|
T Consensus 94 la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~-------------------~~~~~~~~~~spDg~----~l~~~~~~ 150 (662)
T 3azo_A 94 LVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVG-------------------GGLRWADPVLLPERG----EVWCMAEE 150 (662)
T ss_dssp EEEEBTTTCCEEEECTTSTTCCCCEECSCCCCST-------------------TCEEEEEEEEETTTT----EEEEEEEE
T ss_pred EEEEECCCCeEEEEcCCCCCCCCCEeccCCccCC-------------------CCccccCcEECCCCC----EEEEEEec
Confidence 67776 4679999876 4 6677776541100 002245678999999 99999987
Q ss_pred C
Q psy3287 110 E 110 (122)
Q Consensus 110 e 110 (122)
.
T Consensus 151 ~ 151 (662)
T 3azo_A 151 F 151 (662)
T ss_dssp E
T ss_pred c
Confidence 4
No 27
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=91.41 E-value=0.64 Score=38.61 Aligned_cols=63 Identities=6% Similarity=0.101 Sum_probs=39.6
Q ss_pred EEEEEe------CCEEEEeCCCCCeeEEeccccCCcccCCCCeeeccCCccchheecccceEEecCCCCCCceEEEEEEE
Q psy3287 35 EEFSRY------QGYWWQPKTTGSTQRLTFAHKGGRNLTDDPLAAGIPSYVTQEEFSRYQGYWWQPKTTDGVYRILYEEI 108 (122)
Q Consensus 35 ~aFvr~------~nLyv~~~~~~~~~rlT~~~~g~~~v~~~~i~~G~~d~v~eEE~~~~~g~wWSPd~~~~~~~iay~~~ 108 (122)
++|++. ..||..+..++.+++|+.... ...|- + ....+.-|||||+ +|||..-
T Consensus 82 ~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~---------~a~~~-------~-~~~~~~~~SPDG~----~la~~~~ 140 (695)
T 2bkl_A 82 FFYVRTHKDKEKAILYWRQGESGQEKVLLDPNG---------WSKDG-------T-VSLGTWAVSWDGK----KVAFAQK 140 (695)
T ss_dssp EEEEEECTTCSSCEEEEEESTTSCCEEEECGGG---------SSSSS-------C-EEEEEEEECTTSS----EEEEEEE
T ss_pred EEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHH---------hccCC-------C-EEEEEEEECCCCC----EEEEEEC
Confidence 788876 448998877777777765411 11110 0 1245678999999 9999876
Q ss_pred cC----CcceeEEC
Q psy3287 109 DE----SDVKIYNF 118 (122)
Q Consensus 109 De----s~V~~~~~ 118 (122)
.. ..|..+.+
T Consensus 141 ~~G~~~~~i~v~dl 154 (695)
T 2bkl_A 141 PNAADEAVLHVIDV 154 (695)
T ss_dssp ETTCSCCEEEEEET
T ss_pred CCCCceEEEEEEEC
Confidence 54 24555444
No 28
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=91.31 E-value=0.47 Score=39.43 Aligned_cols=20 Identities=20% Similarity=0.428 Sum_probs=17.6
Q ss_pred ceEEecCCCCCCceEEEEEEEcCC
Q psy3287 88 QGYWWQPKTTDGVYRILYEEIDES 111 (122)
Q Consensus 88 ~g~wWSPd~~~~~~~iay~~~Des 111 (122)
.+..|||||+ .|+|...|..
T Consensus 171 ~~~~wspDg~----~l~~~~~d~~ 190 (695)
T 2bkl_A 171 ATPKWTPDSK----GFYYEWLPTD 190 (695)
T ss_dssp CCCEECTTSS----EEEEEECCCC
T ss_pred cceEEecCCC----EEEEEEecCC
Confidence 5678999999 9999999875
No 29
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=91.12 E-value=0.83 Score=33.80 Aligned_cols=18 Identities=17% Similarity=0.429 Sum_probs=14.7
Q ss_pred eEEecCCCCCCceEEEEEEEcC
Q psy3287 89 GYWWQPKTTDGVYRILYEEIDE 110 (122)
Q Consensus 89 g~wWSPd~~~~~~~iay~~~De 110 (122)
...|||||+ +|+|...+.
T Consensus 242 ~~~~spdg~----~l~~~~~~~ 259 (396)
T 3c5m_A 242 HEFWIPDGS----AMAYVSYFK 259 (396)
T ss_dssp EEEECTTSS----CEEEEEEET
T ss_pred ceEECCCCC----EEEEEecCC
Confidence 457999999 999987664
No 30
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=90.83 E-value=0.48 Score=39.74 Aligned_cols=55 Identities=13% Similarity=0.169 Sum_probs=37.0
Q ss_pred Ccceece---EEEEEeC------CEEEEeCCCCCeeEEeccccCCcccCCCCeeeccCCccchheecccceEEecCCCCC
Q psy3287 28 IPSYVTQ---EEFSRYQ------GYWWQPKTTGSTQRLTFAHKGGRNLTDDPLAAGIPSYVTQEEFSRYQGYWWQPKTTD 98 (122)
Q Consensus 28 v~~f~~~---~aFvr~~------nLyv~~~~~~~~~rlT~~~~g~~~v~~~~i~~G~~d~v~eEE~~~~~g~wWSPd~~~ 98 (122)
-+.++++ ++|..+. .||+.++.+|+..+.+.. + ....++.|||| +
T Consensus 167 ~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~--~----------------------~~~~~~~wspD-~- 220 (741)
T 1yr2_A 167 AWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELK--W----------------------VKFSGLAWLGN-D- 220 (741)
T ss_dssp EEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEE--E----------------------EESCCCEESTT-S-
T ss_pred eEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCC--C----------------------ceeccEEEECC-C-
Confidence 4567776 7887652 588888877765443221 1 01246789999 9
Q ss_pred CceEEEEEEEcCC
Q psy3287 99 GVYRILYEEIDES 111 (122)
Q Consensus 99 ~~~~iay~~~Des 111 (122)
.|+|.+.|+.
T Consensus 221 ---~l~~~~~~~~ 230 (741)
T 1yr2_A 221 ---ALLYSRFAEP 230 (741)
T ss_dssp ---EEEEEECCCC
T ss_pred ---EEEEEEecCc
Confidence 9999998875
No 31
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=88.23 E-value=1.6 Score=36.26 Aligned_cols=55 Identities=11% Similarity=0.063 Sum_probs=33.3
Q ss_pred EEEEEe------CCEEEEeCCCCCeeEEeccccCCcccCCCCeeeccCCccchheecccceEEecCCCCCCceEEEEEEE
Q psy3287 35 EEFSRY------QGYWWQPKTTGSTQRLTFAHKGGRNLTDDPLAAGIPSYVTQEEFSRYQGYWWQPKTTDGVYRILYEEI 108 (122)
Q Consensus 35 ~aFvr~------~nLyv~~~~~~~~~rlT~~~~g~~~v~~~~i~~G~~d~v~eEE~~~~~g~wWSPd~~~~~~~iay~~~ 108 (122)
++|.++ ..||+.+..++.++.|+.. + .+..| .-....+.-|||||+ +|||..-
T Consensus 86 ~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~-~--------~l~~~--------~~~~~~~~~~SPDg~----~la~~~~ 144 (710)
T 2xdw_A 86 YFYFYNTGLQNQRVLYVQDSLEGEARVFLDP-N--------ILSDD--------GTVALRGYAFSEDGE----YFAYGLS 144 (710)
T ss_dssp EEEEEECSSCSSCEEEEESSTTSCCEEEECG-G--------GGCTT--------SCEEEEEEEECTTSS----EEEEEEE
T ss_pred EEEEEEcCCceEEEEEEEcCCCCCcEEEECH-H--------HhccC--------CCEEEEEEEECCCCC----EEEEEEc
Confidence 777773 2678887666655545322 1 11111 001245778999999 9999876
Q ss_pred cC
Q psy3287 109 DE 110 (122)
Q Consensus 109 De 110 (122)
+.
T Consensus 145 ~~ 146 (710)
T 2xdw_A 145 AS 146 (710)
T ss_dssp ET
T ss_pred CC
Confidence 54
No 32
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=87.07 E-value=2.2 Score=35.64 Aligned_cols=54 Identities=11% Similarity=0.030 Sum_probs=32.5
Q ss_pred EEEEEe------CCEEEEeCC---CCCeeEEeccccCCcccCCCCeeeccCCccchheecccceEEecCCCCCCceEEEE
Q psy3287 35 EEFSRY------QGYWWQPKT---TGSTQRLTFAHKGGRNLTDDPLAAGIPSYVTQEEFSRYQGYWWQPKTTDGVYRILY 105 (122)
Q Consensus 35 ~aFvr~------~nLyv~~~~---~~~~~rlT~~~~g~~~v~~~~i~~G~~d~v~eEE~~~~~g~wWSPd~~~~~~~iay 105 (122)
++|.+. ..||..+.. ++.+++|+.. +.+..|- + ....+..|||||+ +|||
T Consensus 121 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~---------~~l~~~~-~-------~~~~~~~~SPDG~----~la~ 179 (741)
T 1yr2_A 121 VFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDP---------NTWAKDG-A-------TALDAWAASDDGR----LLAY 179 (741)
T ss_dssp EEEEEECSSCSSCEEEEEETTSCTTCCCEEEECG---------GGCC------------EEEEEEEECTTSS----EEEE
T ss_pred EEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECH---------HHhccCC-C-------EEEEeEEECCCCC----EEEE
Confidence 777773 457888865 5555555332 1112221 1 1245778999999 9999
Q ss_pred EEEc
Q psy3287 106 EEID 109 (122)
Q Consensus 106 ~~~D 109 (122)
..-+
T Consensus 180 ~~~~ 183 (741)
T 1yr2_A 180 SVQD 183 (741)
T ss_dssp EEEE
T ss_pred EEcC
Confidence 8765
No 33
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=85.65 E-value=0.6 Score=37.45 Aligned_cols=70 Identities=7% Similarity=-0.132 Sum_probs=36.2
Q ss_pred Ccceece---EEEE-EeC--CEEEEeCCCCCeeEEeccccCCcccCCCCeeeccCCccchheecccceEEecCCCCCCce
Q psy3287 28 IPSYVTQ---EEFS-RYQ--GYWWQPKTTGSTQRLTFAHKGGRNLTDDPLAAGIPSYVTQEEFSRYQGYWWQPKTTDGVY 101 (122)
Q Consensus 28 v~~f~~~---~aFv-r~~--nLyv~~~~~~~~~rlT~~~~g~~~v~~~~i~~G~~d~v~eEE~~~~~g~wWSPd~~~~~~ 101 (122)
-+.|+++ ++.. +++ .||+.++.++..+ ++..+.. ...++. . .......|||||.
T Consensus 199 ~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~--------~~~~~~----~---~~~~~~~~spdg~---- 258 (582)
T 3o4h_A 199 SASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSK--------DFSSYR----P---TAITWLGYLPDGR---- 258 (582)
T ss_dssp EEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCS--------HHHHHC----C---SEEEEEEECTTSC----
T ss_pred cceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCc--------Chhhhh----h---ccccceeEcCCCc----
Confidence 3555555 3322 344 6888888877666 4433221 111111 0 0112344999985
Q ss_pred EEEEEEEcCCcceeEEC
Q psy3287 102 RILYEEIDESDVKIYNF 118 (122)
Q Consensus 102 ~iay~~~Des~V~~~~~ 118 (122)
|+|...++..+..+.+
T Consensus 259 -~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 259 -LAVVARREGRSAVFID 274 (582)
T ss_dssp -EEEEEEETTEEEEEET
T ss_pred -EEEEEEcCCcEEEEEE
Confidence 5565556666666553
No 34
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=85.62 E-value=1.5 Score=36.53 Aligned_cols=52 Identities=12% Similarity=0.251 Sum_probs=33.0
Q ss_pred ceece---EEEEEe------CCEEEEeCCCCCeeEEeccccCCcccCCCCeeeccCCccchheecccceEEecCCCCCCc
Q psy3287 30 SYVTQ---EEFSRY------QGYWWQPKTTGSTQRLTFAHKGGRNLTDDPLAAGIPSYVTQEEFSRYQGYWWQPKTTDGV 100 (122)
Q Consensus 30 ~f~~~---~aFvr~------~nLyv~~~~~~~~~rlT~~~~g~~~v~~~~i~~G~~d~v~eEE~~~~~g~wWSPd~~~~~ 100 (122)
.++++ +||..+ ..||+.++.+|+..+++..+. +..+.-|| |++
T Consensus 135 ~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~------------------------k~~~~~Ws-Dg~--- 186 (693)
T 3iuj_A 135 SFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDV------------------------KFSGISWL-GNE--- 186 (693)
T ss_dssp EECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEE------------------------ESCCCEEE-TTT---
T ss_pred EECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCc------------------------eeccEEEe-CCC---
Confidence 55665 676653 346777776665544433211 13456799 999
Q ss_pred eEEEEEEEcC
Q psy3287 101 YRILYEEIDE 110 (122)
Q Consensus 101 ~~iay~~~De 110 (122)
.|+|.+.|+
T Consensus 187 -~l~y~~~~~ 195 (693)
T 3iuj_A 187 -GFFYSSYDK 195 (693)
T ss_dssp -EEEEEESSC
T ss_pred -EEEEEEecC
Confidence 999999885
No 35
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=85.19 E-value=1.1 Score=32.92 Aligned_cols=30 Identities=13% Similarity=0.231 Sum_probs=20.8
Q ss_pred ecccceEEecCCCCCCceEEEEEEEcCCcceeEE
Q psy3287 84 FSRYQGYWWQPKTTDGVYRILYEEIDESDVKIYN 117 (122)
Q Consensus 84 ~~~~~g~wWSPd~~~~~~~iay~~~Des~V~~~~ 117 (122)
+....++.||||++ .|.+.......|..+.
T Consensus 148 ~~~pngi~~spdg~----~lyv~~~~~~~i~~~~ 177 (297)
T 3g4e_A 148 VDISNGLDWSLDHK----IFYYIDSLSYSVDAFD 177 (297)
T ss_dssp ESBEEEEEECTTSC----EEEEEEGGGTEEEEEE
T ss_pred cccccceEEcCCCC----EEEEecCCCCcEEEEe
Confidence 45568999999998 7766655555555544
No 36
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=83.06 E-value=4.4 Score=34.32 Aligned_cols=18 Identities=6% Similarity=-0.053 Sum_probs=14.9
Q ss_pred ceEEecCCCCCCceEEEEEEEc
Q psy3287 88 QGYWWQPKTTDGVYRILYEEID 109 (122)
Q Consensus 88 ~g~wWSPd~~~~~~~iay~~~D 109 (122)
.+..|||||+ +|+|...+
T Consensus 274 ~~~~~SpDg~----~l~~~~~~ 291 (751)
T 2xe4_A 274 AFMYKAADTN----TLCIGSQS 291 (751)
T ss_dssp EEEEECTTSS----EEEEEEEC
T ss_pred EEEEECCCCC----EEEEEecC
Confidence 4568999999 99998754
No 37
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=82.37 E-value=9.1 Score=31.78 Aligned_cols=28 Identities=11% Similarity=0.176 Sum_probs=19.3
Q ss_pred cceEEecCCCCCCceEEEEEEEcC---CcceeEEC
Q psy3287 87 YQGYWWQPKTTDGVYRILYEEIDE---SDVKIYNF 118 (122)
Q Consensus 87 ~~g~wWSPd~~~~~~~iay~~~De---s~V~~~~~ 118 (122)
..+..|||||+ +|++..... ++|-.+.+
T Consensus 236 ~~~~~~SpDg~----~l~~~~~~~~~~~~i~~~d~ 266 (693)
T 3iuj_A 236 YVGATVTEDDR----FLLISAANSTSGNRLYVKDL 266 (693)
T ss_dssp EEEEEECTTSC----EEEEEEESSSSCCEEEEEET
T ss_pred EEEEEEcCCCC----EEEEEEccCCCCcEEEEEEC
Confidence 35678999999 999887654 34444444
No 38
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=81.40 E-value=5.9 Score=29.22 Aligned_cols=29 Identities=14% Similarity=0.226 Sum_probs=23.1
Q ss_pred cceEEecCCCCCCceEEEEEEEcCCcceeEECC
Q psy3287 87 YQGYWWQPKTTDGVYRILYEEIDESDVKIYNFP 119 (122)
Q Consensus 87 ~~g~wWSPd~~~~~~~iay~~~Des~V~~~~~~ 119 (122)
-.++.||||++ +|++...++..|..+.+.
T Consensus 76 v~~~~~spdg~----~l~~~~~~~~~v~v~d~~ 104 (391)
T 1l0q_A 76 PQGVAVSPDGK----QVYVTNMASSTLSVIDTT 104 (391)
T ss_dssp EEEEEECTTSS----EEEEEETTTTEEEEEETT
T ss_pred ccceEECCCCC----EEEEEECCCCEEEEEECC
Confidence 35678999999 998888777888877664
No 39
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=80.62 E-value=4.8 Score=29.40 Aligned_cols=29 Identities=0% Similarity=-0.095 Sum_probs=21.7
Q ss_pred ccceEEecCCCCCCceEEEEEEEcCCcceeEEC
Q psy3287 86 RYQGYWWQPKTTDGVYRILYEEIDESDVKIYNF 118 (122)
Q Consensus 86 ~~~g~wWSPd~~~~~~~iay~~~Des~V~~~~~ 118 (122)
.-.++.||||++ +|+....++..|..+.+
T Consensus 87 ~p~~~a~spdg~----~l~~~~~~~~~v~v~~~ 115 (347)
T 3hfq_A 87 PPAYVAVDEARQ----LVYSANYHKGTAEVMKI 115 (347)
T ss_dssp CCSEEEEETTTT----EEEEEETTTTEEEEEEE
T ss_pred CCEEEEECCCCC----EEEEEeCCCCEEEEEEe
Confidence 346678999999 88877766677777665
No 40
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=80.59 E-value=3.1 Score=32.83 Aligned_cols=34 Identities=18% Similarity=0.283 Sum_probs=25.8
Q ss_pred hheecccceEEecCCCCCCceEEEEEEEcCCcceeEEC
Q psy3287 81 QEEFSRYQGYWWQPKTTDGVYRILYEEIDESDVKIYNF 118 (122)
Q Consensus 81 eEE~~~~~g~wWSPd~~~~~~~iay~~~Des~V~~~~~ 118 (122)
.+.+....|+.||||++ +|.+.......|..|.+
T Consensus 217 ~~~l~~pNGia~spDg~----~lYvadt~~~~I~~~~~ 250 (355)
T 3sre_A 217 AEGFDFANGINISPDGK----YVYIAELLAHKIHVYEK 250 (355)
T ss_dssp EEEESSEEEEEECTTSS----EEEEEEGGGTEEEEEEE
T ss_pred ecCCcccCcceECCCCC----EEEEEeCCCCeEEEEEE
Confidence 34567789999999999 77777776666666655
No 41
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=75.92 E-value=17 Score=25.97 Aligned_cols=27 Identities=11% Similarity=0.295 Sum_probs=20.9
Q ss_pred ceEEecCCCCCCceEEEEEEEcCCc-ceeEEC
Q psy3287 88 QGYWWQPKTTDGVYRILYEEIDESD-VKIYNF 118 (122)
Q Consensus 88 ~g~wWSPd~~~~~~~iay~~~Des~-V~~~~~ 118 (122)
.++.|||||+ +|+....+... |..+.+
T Consensus 131 ~~~~~spdg~----~l~~~~~~~~~~i~~~~~ 158 (331)
T 3u4y_A 131 VGIAISPNGN----GLILIDRSSANTVRRFKI 158 (331)
T ss_dssp EEEEECTTSS----CEEEEEETTTTEEEEEEE
T ss_pred cceEECCCCC----EEEEEecCCCceEEEEEE
Confidence 5778999999 88888777666 776654
No 42
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=74.87 E-value=20 Score=25.54 Aligned_cols=30 Identities=7% Similarity=0.185 Sum_probs=24.7
Q ss_pred ceEEecCCCCCCceEEEEEEEcCCcceeEECCCC
Q psy3287 88 QGYWWQPKTTDGVYRILYEEIDESDVKIYNFPSS 121 (122)
Q Consensus 88 ~g~wWSPd~~~~~~~iay~~~Des~V~~~~~~~~ 121 (122)
.++.||||++ +|++..-+...|..+.+..+
T Consensus 276 ~~~~~spdg~----~l~v~~~~~~~v~v~d~~~~ 305 (331)
T 3u4y_A 276 NQMALNKTET----KLFISANISRELKVFTISGK 305 (331)
T ss_dssp CCEEECTTSS----EEEEEETTTTEEEEEETTSC
T ss_pred cceEECCCCC----EEEEecCCCCcEEEEEecCC
Confidence 5578999999 98888888888888887654
No 43
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=72.70 E-value=11 Score=27.42 Aligned_cols=28 Identities=7% Similarity=0.200 Sum_probs=21.5
Q ss_pred cceEEecCCCCCCceEEEEEEEcCCcceeEEC
Q psy3287 87 YQGYWWQPKTTDGVYRILYEEIDESDVKIYNF 118 (122)
Q Consensus 87 ~~g~wWSPd~~~~~~~iay~~~Des~V~~~~~ 118 (122)
-.++.|||||+ +|+....+...|..+.+
T Consensus 288 ~~~~~~spdg~----~l~v~~~~~~~v~v~~~ 315 (347)
T 3hfq_A 288 PRDFDLDPTEA----FVVVVNQNTDNATLYAR 315 (347)
T ss_dssp CCEEEECTTSS----EEEEEETTTTEEEEEEE
T ss_pred cCeEEECCCCC----EEEEEEcCCCcEEEEEE
Confidence 35788999999 88887777677777654
No 44
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=70.67 E-value=8.9 Score=28.17 Aligned_cols=27 Identities=11% Similarity=0.142 Sum_probs=19.4
Q ss_pred ceEEecCCCCCCceEEEEEEEc-CCcceeEEC
Q psy3287 88 QGYWWQPKTTDGVYRILYEEID-ESDVKIYNF 118 (122)
Q Consensus 88 ~g~wWSPd~~~~~~~iay~~~D-es~V~~~~~ 118 (122)
.++.|||||+ +|+...-+ ...|..+.+
T Consensus 262 ~~i~~spdg~----~l~v~~~~~~~~i~v~~~ 289 (361)
T 3scy_A 262 GDIHLSPDGK----YLYASNRLKADGVAIFKV 289 (361)
T ss_dssp EEEEECTTSS----EEEEEECSSSCEEEEEEE
T ss_pred ccEEECCCCC----EEEEECCCCCCEEEEEEE
Confidence 5788999999 77665555 556776665
No 45
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=70.50 E-value=9.3 Score=28.06 Aligned_cols=28 Identities=4% Similarity=-0.025 Sum_probs=19.4
Q ss_pred cceEEecCCCCCCceEEEEEEEcCCcceeEEC
Q psy3287 87 YQGYWWQPKTTDGVYRILYEEIDESDVKIYNF 118 (122)
Q Consensus 87 ~~g~wWSPd~~~~~~~iay~~~Des~V~~~~~ 118 (122)
..++.|||||+ +|+........|..+.+
T Consensus 213 ~~~~~~spdg~----~l~v~~~~~~~v~v~~~ 240 (361)
T 3scy_A 213 PRHLIFNSDGK----FAYLINEIGGTVIAFRY 240 (361)
T ss_dssp EEEEEECTTSS----EEEEEETTTCEEEEEEE
T ss_pred CeEEEEcCCCC----EEEEEcCCCCeEEEEEe
Confidence 35678999998 77666555566666554
No 46
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=70.39 E-value=9.9 Score=28.42 Aligned_cols=29 Identities=10% Similarity=0.264 Sum_probs=23.4
Q ss_pred cceEEecCCCCCCceEEEEEEEcCCcceeEECC
Q psy3287 87 YQGYWWQPKTTDGVYRILYEEIDESDVKIYNFP 119 (122)
Q Consensus 87 ~~g~wWSPd~~~~~~~iay~~~Des~V~~~~~~ 119 (122)
-.++.||||++ +|+..-.++..|..+.+.
T Consensus 403 ~~~~~~s~dg~----~l~~~~~~d~~i~v~~~~ 431 (433)
T 3bws_A 403 PTGLDVSPDNR----YLVISDFLDHQIRVYRRD 431 (433)
T ss_dssp EEEEEECTTSC----EEEEEETTTTEEEEEEET
T ss_pred CceEEEcCCCC----EEEEEECCCCeEEEEEec
Confidence 36788999999 888777778888888764
No 47
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=69.24 E-value=25 Score=25.73 Aligned_cols=28 Identities=14% Similarity=0.228 Sum_probs=21.3
Q ss_pred ceEEecCCCCCCceEEEEEEEcCCcceeEECC
Q psy3287 88 QGYWWQPKTTDGVYRILYEEIDESDVKIYNFP 119 (122)
Q Consensus 88 ~g~wWSPd~~~~~~~iay~~~Des~V~~~~~~ 119 (122)
.++.||||++ +|++...++..|..+.+.
T Consensus 119 ~~~~~s~dg~----~l~~~~~~~~~v~~~d~~ 146 (391)
T 1l0q_A 119 LGLALSPDGK----KLYVTNNGDKTVSVINTV 146 (391)
T ss_dssp EEEEECTTSS----EEEEEETTTTEEEEEETT
T ss_pred ceEEECCCCC----EEEEEeCCCCEEEEEECC
Confidence 5678999999 887777777777776653
No 48
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=68.85 E-value=6.4 Score=29.24 Aligned_cols=29 Identities=10% Similarity=0.062 Sum_probs=18.7
Q ss_pred cccceEEecCCCCCCceEEEEEEEcCCcceeEE
Q psy3287 85 SRYQGYWWQPKTTDGVYRILYEEIDESDVKIYN 117 (122)
Q Consensus 85 ~~~~g~wWSPd~~~~~~~iay~~~Des~V~~~~ 117 (122)
....++.||||++ +|.+.......|-.+.
T Consensus 179 ~~~~~i~~s~dg~----~lyv~~~~~~~I~~~d 207 (326)
T 2ghs_A 179 SIPNSICFSPDGT----TGYFVDTKVNRLMRVP 207 (326)
T ss_dssp SSEEEEEECTTSC----EEEEEETTTCEEEEEE
T ss_pred cccCCeEEcCCCC----EEEEEECCCCEEEEEE
Confidence 3456889999998 7766544444444444
No 49
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=68.28 E-value=27 Score=24.59 Aligned_cols=26 Identities=8% Similarity=0.000 Sum_probs=17.6
Q ss_pred ceEEecCCCCCCceEEEEEEEcCCcceeEEC
Q psy3287 88 QGYWWQPKTTDGVYRILYEEIDESDVKIYNF 118 (122)
Q Consensus 88 ~g~wWSPd~~~~~~~iay~~~Des~V~~~~~ 118 (122)
.++.||||++ +|+.. ..+..|..+.+
T Consensus 283 ~~~~~s~dg~----~l~~~-~~~~~i~v~d~ 308 (337)
T 1pby_B 283 YSVNVSTDGS----TVWLG-GALGDLAAYDA 308 (337)
T ss_dssp CEEEECTTSC----EEEEE-SBSSEEEEEET
T ss_pred eeEEECCCCC----EEEEE-cCCCcEEEEEC
Confidence 5678999998 77665 44555666654
No 50
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=68.12 E-value=7.3 Score=27.90 Aligned_cols=29 Identities=10% Similarity=0.264 Sum_probs=19.1
Q ss_pred cccceEEecCCCCCCceEEEEEEEcCCcceeEEC
Q psy3287 85 SRYQGYWWQPKTTDGVYRILYEEIDESDVKIYNF 118 (122)
Q Consensus 85 ~~~~g~wWSPd~~~~~~~iay~~~Des~V~~~~~ 118 (122)
....++.||||++ .| +.......|..+.+
T Consensus 172 ~~~~gi~~s~dg~----~l-v~~~~~~~i~~~~~ 200 (296)
T 3e5z_A 172 VKPNGLAFLPSGN----LL-VSDTGDNATHRYCL 200 (296)
T ss_dssp SSEEEEEECTTSC----EE-EEETTTTEEEEEEE
T ss_pred CCCccEEECCCCC----EE-EEeCCCCeEEEEEE
Confidence 4457889999998 66 65555555555443
No 51
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=64.51 E-value=25 Score=26.36 Aligned_cols=29 Identities=14% Similarity=0.204 Sum_probs=22.8
Q ss_pred ceEEecCCCCCCceEEEEEEEcCCcceeEECCCC
Q psy3287 88 QGYWWQPKTTDGVYRILYEEIDESDVKIYNFPSS 121 (122)
Q Consensus 88 ~g~wWSPd~~~~~~~iay~~~Des~V~~~~~~~~ 121 (122)
..+.|||||+ +||-...| .-|+++.||..
T Consensus 316 ~~v~fSpdg~----~laS~S~D-~tvrvw~ip~~ 344 (365)
T 4h5i_A 316 TEVTISPDST----YVASVSAA-NTIHIIKLPLN 344 (365)
T ss_dssp EEEEECTTSC----EEEEEETT-SEEEEEECCTT
T ss_pred EEEEECCCCC----EEEEEeCC-CeEEEEEcCCC
Confidence 4678999999 88877754 56899998754
No 52
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=63.11 E-value=14 Score=28.22 Aligned_cols=50 Identities=18% Similarity=0.171 Sum_probs=33.1
Q ss_pred EEEEEeCCEEEEeCCCCCeeEEeccccCCcccCCCCeeeccCCccchheecccceEEecCC
Q psy3287 35 EEFSRYQGYWWQPKTTGSTQRLTFAHKGGRNLTDDPLAAGIPSYVTQEEFSRYQGYWWQPK 95 (122)
Q Consensus 35 ~aFvr~~nLyv~~~~~~~~~rlT~~~~g~~~v~~~~i~~G~~d~v~eEE~~~~~g~wWSPd 95 (122)
++|..+++||+.+.. |..++|. + +. .....+++ +..+....-.|+.++||
T Consensus 36 ia~~pdG~l~V~e~~-g~I~~i~-~--g~-----~~~~~~~~--v~~~g~~~p~gia~~pd 85 (352)
T 2ism_A 36 LAFLPDGGMLIAERP-GRIRLFR-E--GR-----LSTYAELS--VYHRGESGLLGLALHPR 85 (352)
T ss_dssp EEECTTSCEEEEETT-TEEEEEE-T--TE-----EEEEEECC--CCCSTTCSEEEEEECTT
T ss_pred EEEcCCCeEEEEeCC-CeEEEEE-C--CC-----ccEeecce--EeecCCCCceeEEECCC
Confidence 889899999999865 7777776 5 32 22233444 33333445678889998
No 53
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=62.82 E-value=22 Score=25.06 Aligned_cols=66 Identities=6% Similarity=0.133 Sum_probs=38.0
Q ss_pred EEEEE-eCCEEEEeCC--CCCeeEEeccccCCcccCCCCeeeccCCccchheecccceEEecCCCCCCceEEEEEEEcCC
Q psy3287 35 EEFSR-YQGYWWQPKT--TGSTQRLTFAHKGGRNLTDDPLAAGIPSYVTQEEFSRYQGYWWQPKTTDGVYRILYEEIDES 111 (122)
Q Consensus 35 ~aFvr-~~nLyv~~~~--~~~~~rlT~~~~g~~~v~~~~i~~G~~d~v~eEE~~~~~g~wWSPd~~~~~~~iay~~~Des 111 (122)
+++.. ++.|||.+.. .+...++..++.. ..+. ....+..-.++.++|++. +|.+......
T Consensus 127 i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~------~~~~-------~~~~~~~P~gia~d~~~~----~lyv~d~~~~ 189 (267)
T 1npe_A 127 IVTDPVRGNLYWTDWNRDNPKIETSHMDGTN------RRIL-------AQDNLGLPNGLTFDAFSS----QLCWVDAGTH 189 (267)
T ss_dssp EEEETTTTEEEEEECCSSSCEEEEEETTSCC------CEEE-------ECTTCSCEEEEEEETTTT----EEEEEETTTT
T ss_pred EEEeeCCCEEEEEECCCCCcEEEEEecCCCC------cEEE-------EECCCCCCcEEEEcCCCC----EEEEEECCCC
Confidence 77776 5778998854 3444566666321 1111 112344567888898887 6666655554
Q ss_pred cceeEE
Q psy3287 112 DVKIYN 117 (122)
Q Consensus 112 ~V~~~~ 117 (122)
.|..+.
T Consensus 190 ~I~~~~ 195 (267)
T 1npe_A 190 RAECLN 195 (267)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 554443
No 54
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=62.46 E-value=18 Score=27.51 Aligned_cols=54 Identities=13% Similarity=0.127 Sum_probs=36.9
Q ss_pred EEEEEeCCEEEEeCCCCCeeEEeccccCCcccCCCCe-eeccCCccchheecccceEEecCCCC
Q psy3287 35 EEFSRYQGYWWQPKTTGSTQRLTFAHKGGRNLTDDPL-AAGIPSYVTQEEFSRYQGYWWQPKTT 97 (122)
Q Consensus 35 ~aFvr~~nLyv~~~~~~~~~rlT~~~~g~~~v~~~~i-~~G~~d~v~eEE~~~~~g~wWSPd~~ 97 (122)
++| .+++||+.+...+...+|..++.+. .. .....+++ .++.|-.++.+.|||.
T Consensus 273 ~~~-~~G~l~v~~~~~~~v~~v~~~~~~~------~~~~~~~~~~~--~~~~rp~~v~~~pdG~ 327 (352)
T 2ism_A 273 LAF-FRGDLYVAGLRGQALLRLVLEGERG------RWRVLRVETAL--SGFGRLREVQVGPDGA 327 (352)
T ss_dssp EEE-ETTEEEEEETTTTEEEEEEEEEETT------EEEEEEEEEEE--ESSCCEEEEEECTTSC
T ss_pred eEE-ECCEEEEEECCCCEEEEEEECCCCc------ceeecchheec--ccCCCeeEEEECCCCc
Confidence 677 7889999998888888888874431 11 11122333 2356788899999987
No 55
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=60.60 E-value=42 Score=25.70 Aligned_cols=28 Identities=14% Similarity=0.068 Sum_probs=21.2
Q ss_pred cceEEecCCCCCCceEEEEEEE-cCCcceeEEC
Q psy3287 87 YQGYWWQPKTTDGVYRILYEEI-DESDVKIYNF 118 (122)
Q Consensus 87 ~~g~wWSPd~~~~~~~iay~~~-Des~V~~~~~ 118 (122)
..++.|||||+ +++|.-- .+..|-.+..
T Consensus 320 p~~i~~s~Dg~----~~l~v~~~~~~~V~ViD~ 348 (373)
T 2mad_H 320 VDAISVAQDGG----PDLYALSAGTEVLHIYDA 348 (373)
T ss_pred cCeEEECCCCC----eEEEEEcCCCCeEEEEEC
Confidence 57888999999 8888855 4666766654
No 56
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=60.40 E-value=27 Score=26.36 Aligned_cols=59 Identities=10% Similarity=0.236 Sum_probs=36.5
Q ss_pred EEEEEeCCEEEEeCCCCCeeEEeccccCCcccCCCCeeeccCCccchheecccceEEecCCCCCCceEEEEEEEcCCcce
Q psy3287 35 EEFSRYQGYWWQPKTTGSTQRLTFAHKGGRNLTDDPLAAGIPSYVTQEEFSRYQGYWWQPKTTDGVYRILYEEIDESDVK 114 (122)
Q Consensus 35 ~aFvr~~nLyv~~~~~~~~~rlT~~~~g~~~v~~~~i~~G~~d~v~eEE~~~~~g~wWSPd~~~~~~~iay~~~Des~V~ 114 (122)
+|-..++.+++-+..+|+..++...+... ++ =..+.|||||+ +||-.. ++..|.
T Consensus 119 lAvgld~tV~lWd~~tg~~~~~~~~~~~~-------------~~--------V~sv~fspdg~----~lasgs-~Dg~v~ 172 (420)
T 4gga_A 119 LAVALDNSVYLWSASSGDILQLLQMEQPG-------------EY--------ISSVAWIKEGN----YLAVGT-SSAEVQ 172 (420)
T ss_dssp EEEEETTEEEEEETTTCCEEEEEECCSTT-------------CC--------EEEEEECTTSS----EEEEEE-TTSCEE
T ss_pred EEEEeCCEEEEEECCCCCEEEEEEecCCC-------------Cc--------EEEEEECCCCC----EEEEEE-CCCeEE
Confidence 66667888888888888766554321110 11 24577999998 777654 445566
Q ss_pred eEECC
Q psy3287 115 IYNFP 119 (122)
Q Consensus 115 ~~~~~ 119 (122)
.+.+.
T Consensus 173 iWd~~ 177 (420)
T 4gga_A 173 LWDVQ 177 (420)
T ss_dssp EEETT
T ss_pred EEEcC
Confidence 66553
No 57
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=60.31 E-value=22 Score=26.95 Aligned_cols=64 Identities=8% Similarity=0.104 Sum_probs=35.8
Q ss_pred EEEE-EeCCEEEEeCCC-CCeeEEeccccCCcccCCCCeeeccCCccchheecccceEEecCCCCCCceEEEEEEEcCCc
Q psy3287 35 EEFS-RYQGYWWQPKTT-GSTQRLTFAHKGGRNLTDDPLAAGIPSYVTQEEFSRYQGYWWQPKTTDGVYRILYEEIDESD 112 (122)
Q Consensus 35 ~aFv-r~~nLyv~~~~~-~~~~rlT~~~~g~~~v~~~~i~~G~~d~v~eEE~~~~~g~wWSPd~~~~~~~iay~~~Des~ 112 (122)
+++. .++.|||.+... +...++..++..... +....+..-.|+.++|++. +|-+.......
T Consensus 164 iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~-------------~~~~~~~~PnGla~d~~~~----~lY~aD~~~~~ 226 (349)
T 3v64_C 164 IALHPMEGTIYWTDWGNTPRIEASSMDGSGRRI-------------IADTHLFWPNGLTIDYAGR----RMYWVDAKHHV 226 (349)
T ss_dssp EEEETTTTEEEEEECSSSCEEEEEETTSCSCEE-------------SCCSSCSCEEEEEEETTTT----EEEEEETTTTE
T ss_pred EEEecCcCeEEEeccCCCCEEEEEeCCCCCcEE-------------EEECCCCCcceEEEeCCCC----EEEEEECCCCE
Confidence 6666 467788888765 666777767432110 1112344456777777766 55555444333
Q ss_pred cee
Q psy3287 113 VKI 115 (122)
Q Consensus 113 V~~ 115 (122)
|..
T Consensus 227 I~~ 229 (349)
T 3v64_C 227 IER 229 (349)
T ss_dssp EEE
T ss_pred EEE
Confidence 333
No 58
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=60.24 E-value=25 Score=24.29 Aligned_cols=67 Identities=6% Similarity=-0.043 Sum_probs=37.4
Q ss_pred EEEEEeCCEEEEeCCCCCeeEEeccccCCcccCCCCeeeccCCccchheecccceEEecCCCCCCceEEEEEEEcCCcce
Q psy3287 35 EEFSRYQGYWWQPKTTGSTQRLTFAHKGGRNLTDDPLAAGIPSYVTQEEFSRYQGYWWQPKTTDGVYRILYEEIDESDVK 114 (122)
Q Consensus 35 ~aFvr~~nLyv~~~~~~~~~rlT~~~~g~~~v~~~~i~~G~~d~v~eEE~~~~~g~wWSPd~~~~~~~iay~~~Des~V~ 114 (122)
+++..+++||+.....+...++..+ +. .... +....+..-.++.++||++ |.........|.
T Consensus 197 i~~d~~g~l~v~~~~~~~v~~~~~~--~~-----~~~~------~~~~~~~~p~~i~~~~~g~-----l~v~~~~~~~v~ 258 (270)
T 1rwi_B 197 IAVDEAGTVYVTEHNTNQVVKLLAG--ST-----TSTV------LPFTGLNTPLAVAVDSDRT-----VYVADRGNDRVV 258 (270)
T ss_dssp EEECTTCCEEEEETTTSCEEEECTT--CS-----CCEE------CCCCSCSCEEEEEECTTCC-----EEEEEGGGTEEE
T ss_pred EEECCCCCEEEEECCCCcEEEEcCC--CC-----ccee------eccCCCCCceeEEECCCCC-----EEEEECCCCEEE
Confidence 7777778899888766666666444 21 1111 0001133456777888865 444444455566
Q ss_pred eEECC
Q psy3287 115 IYNFP 119 (122)
Q Consensus 115 ~~~~~ 119 (122)
.+.+.
T Consensus 259 ~~~~~ 263 (270)
T 1rwi_B 259 KLTSL 263 (270)
T ss_dssp EECCC
T ss_pred EEcCC
Confidence 55554
No 59
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=60.07 E-value=15 Score=26.68 Aligned_cols=23 Identities=9% Similarity=0.296 Sum_probs=16.7
Q ss_pred eecccceEEecCCCCCCceEEEEEEEc
Q psy3287 83 EFSRYQGYWWQPKTTDGVYRILYEEID 109 (122)
Q Consensus 83 E~~~~~g~wWSPd~~~~~~~iay~~~D 109 (122)
.+....++.||||++ .|.+...+
T Consensus 186 ~~~~p~gl~~spdg~----~lyv~~~~ 208 (305)
T 3dr2_A 186 DLDHPNGLAFSPDEQ----TLYVSQTP 208 (305)
T ss_dssp EESSEEEEEECTTSS----EEEEEECC
T ss_pred cCCCCcceEEcCCCC----EEEEEecC
Confidence 455567899999998 77665544
No 60
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=57.64 E-value=41 Score=23.79 Aligned_cols=26 Identities=12% Similarity=0.119 Sum_probs=16.4
Q ss_pred ceEEecCCCCCCceEEEEEEEcCCcceeEEC
Q psy3287 88 QGYWWQPKTTDGVYRILYEEIDESDVKIYNF 118 (122)
Q Consensus 88 ~g~wWSPd~~~~~~~iay~~~Des~V~~~~~ 118 (122)
.++.||||++ +|+.. -....|..+.+
T Consensus 298 ~~~~~s~dg~----~l~~~-~~~~~v~v~d~ 323 (349)
T 1jmx_B 298 YCVAFDKKGD----KLYLG-GTFNDLAVFNP 323 (349)
T ss_dssp CEEEECSSSS----CEEEE-SBSSEEEEEET
T ss_pred cceEECCCCC----EEEEe-cCCCeEEEEec
Confidence 4678999988 77664 23355555544
No 61
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=57.39 E-value=46 Score=23.61 Aligned_cols=30 Identities=7% Similarity=0.122 Sum_probs=21.1
Q ss_pred ccceEEecCCCCCCceEEEEEEEcCCcceeEECC
Q psy3287 86 RYQGYWWQPKTTDGVYRILYEEIDESDVKIYNFP 119 (122)
Q Consensus 86 ~~~g~wWSPd~~~~~~~iay~~~Des~V~~~~~~ 119 (122)
...++.||||++ +|+....++..|..+.+.
T Consensus 273 ~~~~~~~s~dg~----~l~v~~~~~~~v~~~d~~ 302 (353)
T 3vgz_A 273 ESLAVLFNPARN----EAYVTHRQAGKVSVIDAK 302 (353)
T ss_dssp SCCCEEEETTTT----EEEEEETTTTEEEEEETT
T ss_pred CCceEEECCCCC----EEEEEECCCCeEEEEECC
Confidence 345788999998 876666566667666553
No 62
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=56.46 E-value=26 Score=25.94 Aligned_cols=64 Identities=9% Similarity=0.032 Sum_probs=32.9
Q ss_pred EEEE-EeCCEEEEeCCC-CCeeEEeccccCCcccCCCCeeeccCCccchheecccceEEecCCCCCCceEEEEEEEcCCc
Q psy3287 35 EEFS-RYQGYWWQPKTT-GSTQRLTFAHKGGRNLTDDPLAAGIPSYVTQEEFSRYQGYWWQPKTTDGVYRILYEEIDESD 112 (122)
Q Consensus 35 ~aFv-r~~nLyv~~~~~-~~~~rlT~~~~g~~~v~~~~i~~G~~d~v~eEE~~~~~g~wWSPd~~~~~~~iay~~~Des~ 112 (122)
+++. .++.|||.+... +...++..+|... ..+ ....+..-.|+.|+|++. +|-+.-.....
T Consensus 125 iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~-----~~~--------~~~~~~~P~gla~d~~~~----~lY~~D~~~~~ 187 (316)
T 1ijq_A 125 IVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI-----YSL--------VTENIQWPNGITLDLLSG----RLYWVDSKLHS 187 (316)
T ss_dssp EEEETTTTEEEEEECSSSCEEEEEETTSCCE-----EEE--------ECSSCSCEEEEEEETTTT----EEEEEETTTTE
T ss_pred EEeCCCCCEEEEEccCCCCeEEEEcCCCCCe-----EEE--------EECCCCCceEEEEeccCC----EEEEEECCCCe
Confidence 5555 366777777543 4455555552211 001 112345567888888776 55555433333
Q ss_pred cee
Q psy3287 113 VKI 115 (122)
Q Consensus 113 V~~ 115 (122)
|..
T Consensus 188 I~~ 190 (316)
T 1ijq_A 188 ISS 190 (316)
T ss_dssp EEE
T ss_pred EEE
Confidence 333
No 63
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=55.45 E-value=20 Score=30.34 Aligned_cols=18 Identities=11% Similarity=0.237 Sum_probs=14.8
Q ss_pred ece-EEEEEeCCEEEEeCC
Q psy3287 32 VTQ-EEFSRYQGYWWQPKT 49 (122)
Q Consensus 32 ~~~-~aFvr~~nLyv~~~~ 49 (122)
+|| ++|...++|||+.-.
T Consensus 477 ~PDNL~fd~~G~LwI~eDg 495 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDG 495 (592)
T ss_dssp CEEEEEECTTCCEEEEECC
T ss_pred CCcceEECCCCCEEEEecC
Confidence 455 999999999999753
No 64
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=54.59 E-value=38 Score=23.74 Aligned_cols=27 Identities=4% Similarity=-0.161 Sum_probs=18.0
Q ss_pred ceEEecCCCCCCceEEEEEEEcCCcceeEEC
Q psy3287 88 QGYWWQPKTTDGVYRILYEEIDESDVKIYNF 118 (122)
Q Consensus 88 ~g~wWSPd~~~~~~~iay~~~Des~V~~~~~ 118 (122)
.++.||||++ +|++..-+...|..+.+
T Consensus 37 ~~~~~s~dg~----~l~v~~~~~~~v~~~d~ 63 (337)
T 1pby_B 37 MVPMVAPGGR----IAYATVNKSESLVKIDL 63 (337)
T ss_dssp CCEEECTTSS----EEEEEETTTTEEEEEET
T ss_pred cceEEcCCCC----EEEEEeCCCCeEEEEEC
Confidence 4567888888 77666655555665554
No 65
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=54.34 E-value=28 Score=26.23 Aligned_cols=25 Identities=12% Similarity=0.391 Sum_probs=17.6
Q ss_pred ceEEecCCCCCCceEEEEEEEcCCcceeEEC
Q psy3287 88 QGYWWQPKTTDGVYRILYEEIDESDVKIYNF 118 (122)
Q Consensus 88 ~g~wWSPd~~~~~~~iay~~~Des~V~~~~~ 118 (122)
..+.|||||+ +||... +..|-.+.+
T Consensus 363 ~svafspdG~----~LA~as--~~Gv~lvrL 387 (393)
T 4gq1_A 363 VDFCWHQDGS----HLAIAT--EGSVLLTRL 387 (393)
T ss_dssp EEEEECTTSS----EEEEEE--SSEEEEEEE
T ss_pred EEEEEcCCCC----EEEEEe--CCCeEEEEE
Confidence 4678999999 999875 334554443
No 66
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=53.92 E-value=30 Score=26.81 Aligned_cols=72 Identities=11% Similarity=0.106 Sum_probs=46.3
Q ss_pred EEEEEeCCEEEEeC-CCCCeeEEe-ccccCCcccCCCCeeecc---CCcc----chheecccceEEecCCCCCCceEEEE
Q psy3287 35 EEFSRYQGYWWQPK-TTGSTQRLT-FAHKGGRNLTDDPLAAGI---PSYV----TQEEFSRYQGYWWQPKTTDGVYRILY 105 (122)
Q Consensus 35 ~aFvr~~nLyv~~~-~~~~~~rlT-~~~~g~~~v~~~~i~~G~---~d~v----~eEE~~~~~g~wWSPd~~~~~~~iay 105 (122)
+++..+++||+++. .....+++. .+ +.. ....|. ..+. .+-.|..-.++..+|| . .|..
T Consensus 328 ia~d~dG~lyvad~~~~~~I~~~~~~~--G~v-----~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~-g----~lyV 395 (409)
T 3hrp_A 328 MTVDEDGNFYIVDGFKGYCLRKLDILD--GYV-----STVAGQVDVASQIDGTPLEATFNYPYDICYDGE-G----GYWI 395 (409)
T ss_dssp EEECTTCCEEEEETTTTCEEEEEETTT--TEE-----EEEEECTTCBSCCCBSTTTCCBSSEEEEEECSS-S----EEEE
T ss_pred EEEeCCCCEEEEeCCCCCEEEEEECCC--CEE-----EEEeCCCCCCCcCCCChhceEeCCceEEEEcCC-C----CEEE
Confidence 89999999999997 777777776 33 221 111121 1111 1223677889999999 4 6777
Q ss_pred EEEcCCcceeEEC
Q psy3287 106 EEIDESDVKIYNF 118 (122)
Q Consensus 106 ~~~Des~V~~~~~ 118 (122)
+......|..+.+
T Consensus 396 ad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 396 AEAWGKAIRKYAV 408 (409)
T ss_dssp EESTTCEEEEEEE
T ss_pred EECCCCeEEEEEe
Confidence 7777777776654
No 67
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=53.73 E-value=27 Score=25.05 Aligned_cols=19 Identities=16% Similarity=0.066 Sum_probs=13.2
Q ss_pred cccceEEecCCCCCCceEEEEEE
Q psy3287 85 SRYQGYWWQPKTTDGVYRILYEE 107 (122)
Q Consensus 85 ~~~~g~wWSPd~~~~~~~iay~~ 107 (122)
....++.||||++ +|.+..
T Consensus 182 ~~~~~i~~~~dg~----~l~v~~ 200 (333)
T 2dg1_A 182 SVANGIALSTDEK----VLWVTE 200 (333)
T ss_dssp SSEEEEEECTTSS----EEEEEE
T ss_pred CcccceEECCCCC----EEEEEe
Confidence 3456788999987 665544
No 68
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=52.39 E-value=22 Score=27.32 Aligned_cols=64 Identities=6% Similarity=0.077 Sum_probs=34.9
Q ss_pred EEEE-EeCCEEEEeCCC-CCeeEEeccccCCcccCCCCeeeccCCccchheecccceEEecCCCCCCceEEEEEEEcCCc
Q psy3287 35 EEFS-RYQGYWWQPKTT-GSTQRLTFAHKGGRNLTDDPLAAGIPSYVTQEEFSRYQGYWWQPKTTDGVYRILYEEIDESD 112 (122)
Q Consensus 35 ~aFv-r~~nLyv~~~~~-~~~~rlT~~~~g~~~v~~~~i~~G~~d~v~eEE~~~~~g~wWSPd~~~~~~~iay~~~Des~ 112 (122)
+++. .++.|||.+... +...++..++... ..+ ....+..-.|+.|+|++. +|-+.......
T Consensus 207 iavdp~~g~ly~td~~~~~~I~r~~~dG~~~-----~~~--------~~~~~~~PnGlavd~~~~----~lY~aD~~~~~ 269 (386)
T 3v65_B 207 IALHPMEGTIYWTDWGNTPRIEASSMDGSGR-----RII--------ADTHLFWPNGLTIDYAGR----RMYWVDAKHHV 269 (386)
T ss_dssp EEEETTTTEEEEEECSSSCEEEEEETTSCSC-----EEE--------ECSSCSCEEEEEEEGGGT----EEEEEETTTTE
T ss_pred EEEEcCCCeEEEeccCCCCEEEEEeCCCCCc-----EEE--------EECCCCCeeeEEEeCCCC----EEEEEECCCCE
Confidence 6666 467788888665 5666776663321 011 112234456777777766 55555444433
Q ss_pred cee
Q psy3287 113 VKI 115 (122)
Q Consensus 113 V~~ 115 (122)
|..
T Consensus 270 I~~ 272 (386)
T 3v65_B 270 IER 272 (386)
T ss_dssp EEE
T ss_pred EEE
Confidence 433
No 69
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=52.35 E-value=60 Score=23.01 Aligned_cols=28 Identities=14% Similarity=0.051 Sum_probs=19.5
Q ss_pred cceEEecCCCCCCceEEEEEEEcCCcceeEEC
Q psy3287 87 YQGYWWQPKTTDGVYRILYEEIDESDVKIYNF 118 (122)
Q Consensus 87 ~~g~wWSPd~~~~~~~iay~~~Des~V~~~~~ 118 (122)
-.++.||||++ +|+....++..|..+.+
T Consensus 91 ~~~~~~s~dg~----~l~v~~~~~~~v~~~d~ 118 (353)
T 3vgz_A 91 PFGATINNTTQ----TLWFGNTVNSAVTAIDA 118 (353)
T ss_dssp CCSEEEETTTT----EEEEEETTTTEEEEEET
T ss_pred cceEEECCCCC----EEEEEecCCCEEEEEeC
Confidence 45678999998 77776666666665554
No 70
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=52.28 E-value=20 Score=28.25 Aligned_cols=70 Identities=16% Similarity=0.185 Sum_probs=43.0
Q ss_pred EEeCCEEEEeCCCCCeeEEeccccCCcccCCCCeeeccCC-----c----c-chheecccceEEecCCCCCCceEEEEEE
Q psy3287 38 SRYQGYWWQPKTTGSTQRLTFAHKGGRNLTDDPLAAGIPS-----Y----V-TQEEFSRYQGYWWQPKTTDGVYRILYEE 107 (122)
Q Consensus 38 vr~~nLyv~~~~~~~~~rlT~~~~g~~~v~~~~i~~G~~d-----~----v-~eEE~~~~~g~wWSPd~~~~~~~iay~~ 107 (122)
..+++||+++......++++-+ |. -....|... | . .+-.|..-.++..+|... .|..+-
T Consensus 352 d~~g~lyvaD~~n~~I~~~~~~--G~-----v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g----~lyVaD 420 (433)
T 4hw6_A 352 EDEYDFYFCDRDSHTVRVLTPE--GR-----VTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRK----CFYIGD 420 (433)
T ss_dssp SCCEEEEEEETTTTEEEEECTT--SE-----EEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTT----EEEEEE
T ss_pred CCCCcEEEEECCCCEEEEECCC--CC-----EEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCC----EEEEEe
Confidence 6788999999877777777655 32 111222211 1 1 122467788999996655 676666
Q ss_pred EcCCcceeEEC
Q psy3287 108 IDESDVKIYNF 118 (122)
Q Consensus 108 ~Des~V~~~~~ 118 (122)
..-..|..+.+
T Consensus 421 ~~n~rIr~i~~ 431 (433)
T 4hw6_A 421 CDNHRVRKIAP 431 (433)
T ss_dssp GGGTEEEEEEE
T ss_pred CCCCEEEEEec
Confidence 66666666543
No 71
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=51.41 E-value=28 Score=27.32 Aligned_cols=66 Identities=9% Similarity=0.049 Sum_probs=39.8
Q ss_pred EEEEE-eCCEEEEeCCCCCeeEEeccccCCcccCCCCeeeccCCccchheecccceEEecCCCCCCceEEEEEEEcCCcc
Q psy3287 35 EEFSR-YQGYWWQPKTTGSTQRLTFAHKGGRNLTDDPLAAGIPSYVTQEEFSRYQGYWWQPKTTDGVYRILYEEIDESDV 113 (122)
Q Consensus 35 ~aFvr-~~nLyv~~~~~~~~~rlT~~~~g~~~v~~~~i~~G~~d~v~eEE~~~~~g~wWSPd~~~~~~~iay~~~Des~V 113 (122)
+++.. ++.||+.+...++..++..++.. ......+++ .....++.++|+++ +|.+.......|
T Consensus 231 iavdp~~g~lyv~d~~~~~V~~~~~~~~~------~~~~~~~~~------~~~P~gia~~pdG~----~lyv~d~~~~~I 294 (430)
T 3tc9_A 231 AETHPINGELYFNSWNAGQVFRYDFTTQE------TTPLFTIQD------SGWEFHIQFHPSGN----YAYIVVVNQHYI 294 (430)
T ss_dssp EEECTTTCCEEEEETTTTEEEEEETTTTE------EEEEEECSS------SSCCEEEEECTTSS----EEEEEETTTTEE
T ss_pred EEEeCCCCEEEEEECCCCEEEEEECCCCc------EEEEEEcCC------CCcceeEEEcCCCC----EEEEEECCCCEE
Confidence 66776 78999999887877777666211 001111111 12356788999988 666665555555
Q ss_pred eeE
Q psy3287 114 KIY 116 (122)
Q Consensus 114 ~~~ 116 (122)
..+
T Consensus 295 ~~~ 297 (430)
T 3tc9_A 295 LRS 297 (430)
T ss_dssp EEE
T ss_pred EEE
Confidence 444
No 72
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=50.45 E-value=41 Score=28.67 Aligned_cols=13 Identities=15% Similarity=0.342 Sum_probs=11.9
Q ss_pred EEEEEeCCEEEEe
Q psy3287 35 EEFSRYQGYWWQP 47 (122)
Q Consensus 35 ~aFvr~~nLyv~~ 47 (122)
++|..+++||++.
T Consensus 481 L~fd~~G~LWf~T 493 (592)
T 4a9v_A 481 LGFDKAGRLWILT 493 (592)
T ss_dssp EEECTTCCEEEEE
T ss_pred eEECCCCCEEEEe
Confidence 9999999999964
No 73
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=49.95 E-value=48 Score=24.21 Aligned_cols=25 Identities=12% Similarity=0.134 Sum_probs=20.1
Q ss_pred EEEEEeCCEEEEeCCCCCeeEEecc
Q psy3287 35 EEFSRYQGYWWQPKTTGSTQRLTFA 59 (122)
Q Consensus 35 ~aFvr~~nLyv~~~~~~~~~rlT~~ 59 (122)
+++..+++||+.+...+..+++..+
T Consensus 96 ia~d~~g~l~v~d~~~~~v~~~~~~ 120 (329)
T 3fvz_A 96 LSIDTDGNYWVTDVALHQVFKLDPH 120 (329)
T ss_dssp EEECTTSCEEEEETTTTEEEEECTT
T ss_pred EEECCCCCEEEEECCCCEEEEEeCC
Confidence 8888999999999777766666655
No 74
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=49.88 E-value=54 Score=23.14 Aligned_cols=27 Identities=7% Similarity=-0.023 Sum_probs=16.3
Q ss_pred ceEEecCCCCCCceEEEEEEEcCCcceeEEC
Q psy3287 88 QGYWWQPKTTDGVYRILYEEIDESDVKIYNF 118 (122)
Q Consensus 88 ~g~wWSPd~~~~~~~iay~~~Des~V~~~~~ 118 (122)
.++.||||++ +|+...-....|..+.+
T Consensus 46 ~~~~~s~dg~----~~~v~~~~~~~i~~~d~ 72 (349)
T 1jmx_B 46 GTAMMAPDNR----TAYVLNNHYGDIYGIDL 72 (349)
T ss_dssp CEEEECTTSS----EEEEEETTTTEEEEEET
T ss_pred ceeEECCCCC----EEEEEeCCCCcEEEEeC
Confidence 4567888887 66665544445555443
No 75
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=48.55 E-value=27 Score=25.42 Aligned_cols=33 Identities=15% Similarity=0.104 Sum_probs=22.8
Q ss_pred eecccceEEecCCCCCCceEEEEEEEcCCcceeEECC
Q psy3287 83 EFSRYQGYWWQPKTTDGVYRILYEEIDESDVKIYNFP 119 (122)
Q Consensus 83 E~~~~~g~wWSPd~~~~~~~iay~~~Des~V~~~~~~ 119 (122)
.+....|+.|+||++ +|.+.......|..+.+.
T Consensus 183 ~~~~p~gia~~~dg~----~lyv~d~~~~~I~~~~~~ 215 (322)
T 2fp8_A 183 ELHVPGGAEVSADSS----FVLVAEFLSHQIVKYWLE 215 (322)
T ss_dssp EESCCCEEEECTTSS----EEEEEEGGGTEEEEEESS
T ss_pred CCccCcceEECCCCC----EEEEEeCCCCeEEEEECC
Confidence 355668899999998 776666655566655543
No 76
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=47.51 E-value=27 Score=27.51 Aligned_cols=69 Identities=12% Similarity=0.142 Sum_probs=42.7
Q ss_pred eceEEEEEeCCEEEEeCCC-CCeeEEeccccCCcccCCCCeeeccCCccchhee--c--ccceEEecCCCCCCceEEEEE
Q psy3287 32 VTQEEFSRYQGYWWQPKTT-GSTQRLTFAHKGGRNLTDDPLAAGIPSYVTQEEF--S--RYQGYWWQPKTTDGVYRILYE 106 (122)
Q Consensus 32 ~~~~aFvr~~nLyv~~~~~-~~~~rlT~~~~g~~~v~~~~i~~G~~d~v~eEE~--~--~~~g~wWSPd~~~~~~~iay~ 106 (122)
.-+++...++|.|+...-. +...+|.-+|+- .. -|..++.. . -.+|+-+.|||. .|+-.
T Consensus 139 ~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~-------~~-----~~~~~~~~~~~~~G~nGIv~~pdg~----~Liv~ 202 (334)
T 2p9w_A 139 VVQSAQDRDGNSYVAFALGMPAIARVSADGKT-------VS-----TFAWESGNGGQRPGYSGITFDPHSN----KLIAF 202 (334)
T ss_dssp EEEEEECTTSCEEEEEEESSCEEEEECTTSCC-------EE-----EEEECCCCSSSCCSCSEEEEETTTT----EEEEE
T ss_pred CceeEECCCCCEEEeCCCCCCeEEEEeCCCCE-------Ee-----eeeecCCCcccccCcceEEEeCCCC----EEEEE
Confidence 4459999999999977666 778888888331 11 11111111 1 257999999998 66555
Q ss_pred EEcCCcceeEE
Q psy3287 107 EIDESDVKIYN 117 (122)
Q Consensus 107 ~~Des~V~~~~ 117 (122)
.. ...+-.+.
T Consensus 203 ~~-~g~L~~fD 212 (334)
T 2p9w_A 203 GG-PRALTAFD 212 (334)
T ss_dssp SS-SSSEEEEE
T ss_pred cC-CCeEEEEc
Confidence 43 44444443
No 77
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=47.42 E-value=70 Score=22.38 Aligned_cols=67 Identities=12% Similarity=0.184 Sum_probs=34.5
Q ss_pred EEEEEeCCEEEEeCCCCCeeEEeccccCCcccCCCCeeeccCCccchheecccceEEecCCCCCCceEEEEEEEcCCcce
Q psy3287 35 EEFSRYQGYWWQPKTTGSTQRLTFAHKGGRNLTDDPLAAGIPSYVTQEEFSRYQGYWWQPKTTDGVYRILYEEIDESDVK 114 (122)
Q Consensus 35 ~aFvr~~nLyv~~~~~~~~~rlT~~~~g~~~v~~~~i~~G~~d~v~eEE~~~~~g~wWSPd~~~~~~~iay~~~Des~V~ 114 (122)
+++..+++||+.....+...++..+. +. .....+.+. ..-.++.++||++ +|.....+...|-
T Consensus 231 i~~d~~G~l~v~~~~~~~i~~~d~~~-g~-----~~~~~~~~~-------~~~~~i~~~~dg~----~l~v~~~~~~~l~ 293 (314)
T 1pjx_A 231 MDFDEDNNLLVANWGSSHIEVFGPDG-GQ-----PKMRIRCPF-------EKPSNLHFKPQTK----TIFVTEHENNAVW 293 (314)
T ss_dssp EEEBTTCCEEEEEETTTEEEEECTTC-BS-----CSEEEECSS-------SCEEEEEECTTSS----EEEEEETTTTEEE
T ss_pred eEECCCCCEEEEEcCCCEEEEEcCCC-Cc-----EeEEEeCCC-------CCceeEEECCCCC----EEEEEeCCCCeEE
Confidence 67777888888875555444443220 11 111112221 2235666788887 6555544444555
Q ss_pred eEEC
Q psy3287 115 IYNF 118 (122)
Q Consensus 115 ~~~~ 118 (122)
.+.+
T Consensus 294 ~~~~ 297 (314)
T 1pjx_A 294 KFEW 297 (314)
T ss_dssp EEEC
T ss_pred EEeC
Confidence 5543
No 78
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=46.09 E-value=66 Score=24.12 Aligned_cols=16 Identities=13% Similarity=0.011 Sum_probs=11.4
Q ss_pred ceEEecCCCCCCceEEEEEE
Q psy3287 88 QGYWWQPKTTDGVYRILYEE 107 (122)
Q Consensus 88 ~g~wWSPd~~~~~~~iay~~ 107 (122)
.+..|||+++ +|.|..
T Consensus 107 ~~~~~s~~g~----~Iy~~~ 122 (302)
T 3s25_A 107 PCIYASLIGN----YIYYLH 122 (302)
T ss_dssp CEEEEEEETT----EEEEEE
T ss_pred CccEEEEeCC----EEEEEe
Confidence 3446788888 888876
No 79
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=45.89 E-value=72 Score=22.10 Aligned_cols=30 Identities=7% Similarity=0.128 Sum_probs=20.8
Q ss_pred Ccceece--EEEEEeCCEEEEeCCCCCeeEEe
Q psy3287 28 IPSYVTQ--EEFSRYQGYWWQPKTTGSTQRLT 57 (122)
Q Consensus 28 v~~f~~~--~aFvr~~nLyv~~~~~~~~~rlT 57 (122)
...|+++ +|...++.+.+-+..+|+..++.
T Consensus 30 ~l~WS~~~~lAvg~D~tV~iWd~~tg~~~~~~ 61 (318)
T 4ggc_A 30 LVDWSSGNVLAVALDNSVYLWSASSGDILQLL 61 (318)
T ss_dssp CEEECTTSEEEEEETTEEEEEETTTCCEEEEE
T ss_pred EEEECCCCEEEEEeCCEEEEEECCCCCEEEEE
Confidence 3455555 66667888999988888765543
No 80
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=45.68 E-value=63 Score=24.55 Aligned_cols=50 Identities=16% Similarity=0.104 Sum_probs=31.3
Q ss_pred EEEEEeCCEEEEeCCCCCeeEEeccccCCcccCCCCeeeccCCccchheecccceEEecCC
Q psy3287 35 EEFSRYQGYWWQPKTTGSTQRLTFAHKGGRNLTDDPLAAGIPSYVTQEEFSRYQGYWWQPK 95 (122)
Q Consensus 35 ~aFvr~~nLyv~~~~~~~~~rlT~~~~g~~~v~~~~i~~G~~d~v~eEE~~~~~g~wWSPd 95 (122)
++|..+++||+.... |..++|..+ +. ....+++ +..+-.....++.++||
T Consensus 34 ia~~pdG~l~V~e~~-g~I~~~d~~--G~------~~~~~~~--v~~~g~~g~~gia~~pd 83 (354)
T 3a9g_A 34 IAPLGGGRYLVTERP-GRLVLISPS--GK------KLVASFD--VANVGEAGLLGLALHPE 83 (354)
T ss_dssp EEEEETTEEEEEETT-TEEEEECSS--CE------EEEEECC--CCCSTTCSEEEEEECTT
T ss_pred EEEcCCCeEEEEeCC-CEEEEEeCC--Cc------eEeeccc--eeecCCCceeeEEeCCC
Confidence 899999999999876 777777433 31 1233344 22222244567888887
No 81
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=45.54 E-value=56 Score=24.45 Aligned_cols=64 Identities=6% Similarity=0.049 Sum_probs=33.9
Q ss_pred EEEE-EeCCEEEEeCC-CCCeeEEeccccCCcccCCCCeeeccCCccchheecccceEEecCCCCCCceEEEEEEEcCCc
Q psy3287 35 EEFS-RYQGYWWQPKT-TGSTQRLTFAHKGGRNLTDDPLAAGIPSYVTQEEFSRYQGYWWQPKTTDGVYRILYEEIDESD 112 (122)
Q Consensus 35 ~aFv-r~~nLyv~~~~-~~~~~rlT~~~~g~~~v~~~~i~~G~~d~v~eEE~~~~~g~wWSPd~~~~~~~iay~~~Des~ 112 (122)
+++. ..+.|||.+.. .+...++..+|... ..+ ..+.+..-.|+.|+|++. +|-+.-.....
T Consensus 127 iavdp~~g~ly~td~~~~~~I~r~~~dG~~~-----~~~--------~~~~l~~Pnglavd~~~~----~lY~aD~~~~~ 189 (318)
T 3sov_A 127 IALDPSSGFMYWTDWGEVPKIERAGMDGSSR-----FII--------INSEIYWPNGLTLDYEEQ----KLYWADAKLNF 189 (318)
T ss_dssp EEEEGGGTEEEEEECSSSCEEEEEETTSCSC-----EEE--------ECSSCSCEEEEEEETTTT----EEEEEETTTTE
T ss_pred EEEeCCCCEEEEEecCCCCEEEEEEcCCCCe-----EEE--------EECCCCCccEEEEeccCC----EEEEEECCCCE
Confidence 5666 35677887743 34566666663321 011 112345567788888776 55555443333
Q ss_pred cee
Q psy3287 113 VKI 115 (122)
Q Consensus 113 V~~ 115 (122)
|..
T Consensus 190 I~~ 192 (318)
T 3sov_A 190 IHK 192 (318)
T ss_dssp EEE
T ss_pred EEE
Confidence 333
No 82
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=45.51 E-value=86 Score=25.09 Aligned_cols=63 Identities=8% Similarity=0.066 Sum_probs=35.7
Q ss_pred Ccceece---EEEEEeCCEEEEeCCCCCeeEEeccccCCcccCCCCeeeccCCccchheecccceEEecCCCCCCceEEE
Q psy3287 28 IPSYVTQ---EEFSRYQGYWWQPKTTGSTQRLTFAHKGGRNLTDDPLAAGIPSYVTQEEFSRYQGYWWQPKTTDGVYRIL 104 (122)
Q Consensus 28 v~~f~~~---~aFvr~~nLyv~~~~~~~~~rlT~~~~g~~~v~~~~i~~G~~d~v~eEE~~~~~g~wWSPd~~~~~~~ia 104 (122)
.+.|+|+ +++.-++.+.+.++.++...+.-..+. +. -....|||||+ +||
T Consensus 23 ~~~~spdg~~l~~~~~~~v~l~~~~~~~~~~~~~~h~---------------~~--------v~~~~~spdg~----~la 75 (611)
T 1nr0_A 23 VLGNTPAGDKIQYCNGTSVYTVPVGSLTDTEIYTEHS---------------HQ--------TTVAKTSPSGY----YCA 75 (611)
T ss_dssp CCEECTTSSEEEEEETTEEEEEETTCSSCCEEECCCS---------------SC--------EEEEEECTTSS----EEE
T ss_pred EEeeCCCCCEEEeCCCCEEEEecCCCcccCeEecCCC---------------Cc--------eEEEEECCCCc----EEE
Confidence 4456665 666666777777765544333222211 11 24567899998 887
Q ss_pred EEEEcCCcceeEEC
Q psy3287 105 YEEIDESDVKIYNF 118 (122)
Q Consensus 105 y~~~Des~V~~~~~ 118 (122)
-...| ..|..+.+
T Consensus 76 sg~~d-~~v~lWd~ 88 (611)
T 1nr0_A 76 SGDVH-GNVRIWDT 88 (611)
T ss_dssp EEETT-SEEEEEES
T ss_pred EEeCC-CCEEEeEC
Confidence 76654 34555544
No 83
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=44.69 E-value=76 Score=21.99 Aligned_cols=28 Identities=4% Similarity=0.143 Sum_probs=20.4
Q ss_pred ceEEecCCCCCCceEEEEEEEcCCcceeEECCC
Q psy3287 88 QGYWWQPKTTDGVYRILYEEIDESDVKIYNFPS 120 (122)
Q Consensus 88 ~g~wWSPd~~~~~~~iay~~~Des~V~~~~~~~ 120 (122)
..+.||||++ +||-.. ++..|..+.+.+
T Consensus 288 ~~l~~spdg~----~l~S~s-~D~~v~iWd~~~ 315 (318)
T 4ggc_A 288 LSLTMSPDGA----TVASAA-ADETLRLWRCFE 315 (318)
T ss_dssp EEEEECTTSS----CEEEEE-TTTEEEEECCSC
T ss_pred EEEEEcCCCC----EEEEEe-cCCeEEEEECCC
Confidence 4567999999 887665 456688877643
No 84
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=44.59 E-value=50 Score=24.07 Aligned_cols=76 Identities=7% Similarity=0.002 Sum_probs=42.3
Q ss_pred EEEEE-eCCEEEEeC-CCCCeeEEeccccCCcccCCCCeeeccCCccchheecccceEEecCCCCCCceEEEEEEEcCCc
Q psy3287 35 EEFSR-YQGYWWQPK-TTGSTQRLTFAHKGGRNLTDDPLAAGIPSYVTQEEFSRYQGYWWQPKTTDGVYRILYEEIDESD 112 (122)
Q Consensus 35 ~aFvr-~~nLyv~~~-~~~~~~rlT~~~~g~~~v~~~~i~~G~~d~v~eEE~~~~~g~wWSPd~~~~~~~iay~~~Des~ 112 (122)
++|.. +++||+++. ..+..+++..+ |..-. ..-..|..+-....++..-.++..+|++. +|...-.....
T Consensus 148 ia~~~~~g~lyv~d~~~~~~I~~~~~~--g~~~~--~~~~~g~~~~~~~~~~~~p~gia~d~~~g----~l~v~d~~~~~ 219 (329)
T 3fvz_A 148 VAVEPSTGAVFVSDGYCNSRIVQFSPS--GKFVT--QWGEESSGSSPRPGQFSVPHSLALVPHLD----QLCVADRENGR 219 (329)
T ss_dssp EEECTTTCCEEEEECSSCCEEEEECTT--SCEEE--EECEECCSSSCCTTEESCEEEEEEETTTT----EEEEEETTTTE
T ss_pred EEEeCCCCeEEEEeCCCCCeEEEEcCC--CCEEE--EeccCCCCCCCCCcccCCCcEEEEECCCC----EEEEEECCCCE
Confidence 88887 899999985 56656665544 32100 00001111111123466677888899866 66666555555
Q ss_pred ceeEEC
Q psy3287 113 VKIYNF 118 (122)
Q Consensus 113 V~~~~~ 118 (122)
|..+..
T Consensus 220 I~~~~~ 225 (329)
T 3fvz_A 220 IQCFKT 225 (329)
T ss_dssp EEEEET
T ss_pred EEEEEC
Confidence 555543
No 85
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=43.85 E-value=66 Score=24.81 Aligned_cols=57 Identities=9% Similarity=0.043 Sum_probs=35.7
Q ss_pred eEEEEE-eCCEEEEeCCCCCeeEEeccccCCcccCCCCeeecc---CCcc---c-hheecccceEEecCCCC
Q psy3287 34 QEEFSR-YQGYWWQPKTTGSTQRLTFAHKGGRNLTDDPLAAGI---PSYV---T-QEEFSRYQGYWWQPKTT 97 (122)
Q Consensus 34 ~~aFvr-~~nLyv~~~~~~~~~rlT~~~~g~~~v~~~~i~~G~---~d~v---~-eEE~~~~~g~wWSPd~~ 97 (122)
.++|.. ++.||+.+...+..+++..++. -....|. +.+. . ...|..-.++.++||+.
T Consensus 271 ~ia~~p~~g~lyv~d~~~~~I~~~~~~g~-------~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~ 335 (409)
T 3hrp_A 271 YLIYYFVDSNFYMSDQNLSSVYKITPDGE-------CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGN 335 (409)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEECTTCC-------EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCC
T ss_pred cEEEeCCCCEEEEEeCCCCEEEEEecCCC-------EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCC
Confidence 588888 6899999987777888877632 1112221 1111 1 11255678889999975
No 86
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=43.04 E-value=62 Score=22.66 Aligned_cols=25 Identities=16% Similarity=0.254 Sum_probs=19.6
Q ss_pred EEEEE-eCCEEEEeCCCCCeeEEecc
Q psy3287 35 EEFSR-YQGYWWQPKTTGSTQRLTFA 59 (122)
Q Consensus 35 ~aFvr-~~nLyv~~~~~~~~~rlT~~ 59 (122)
+++.. ++.|||.+...+...++..+
T Consensus 41 i~~d~~~~~ly~~d~~~~~I~~~~~~ 66 (267)
T 1npe_A 41 LAFDCVDKVVYWTDISEPSIGRASLH 66 (267)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEESS
T ss_pred EEEecCCCEEEEEECCCCEEEEEecC
Confidence 77775 57899999887777777666
No 87
>3ia8_A THAP domain-containing protein 4; beta barrel,structural genomics, protein structure initiativ center for eukaryotic structural genomics, CESG; HET: HEM; 1.79A {Homo sapiens} SCOP: b.60.1.0
Probab=41.61 E-value=47 Score=23.37 Aligned_cols=30 Identities=17% Similarity=0.344 Sum_probs=21.0
Q ss_pred eecccceEE-ecCCCCCCceEEEEEEEcCCcceeE
Q psy3287 83 EFSRYQGYW-WQPKTTDGVYRILYEEIDESDVKIY 116 (122)
Q Consensus 83 E~~~~~g~w-WSPd~~~~~~~iay~~~Des~V~~~ 116 (122)
.|.+.+||| |.|++. .|.+.....+.+-.+
T Consensus 64 p~h~E~Gfwr~~p~~~----~ve~~la~p~G~~ei 94 (163)
T 3ia8_A 64 PMHRECGFIRLKPDTN----KVAFVSAQNTGVVEV 94 (163)
T ss_dssp EEEEEEEEEEECTTSC----EEEEEEEETTTEEEE
T ss_pred cceEEeEEEEEcCCCC----eEEEEEEeCCCeEEE
Confidence 367779997 788877 777766666655444
No 88
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=39.06 E-value=86 Score=22.29 Aligned_cols=63 Identities=13% Similarity=0.022 Sum_probs=33.1
Q ss_pred EEEEEeCCEEEEeCCCCCeeEEeccccCCcccCCCCeeeccCCccchheecccceEEecCCCCCCceEEEEEEEc
Q psy3287 35 EEFSRYQGYWWQPKTTGSTQRLTFAHKGGRNLTDDPLAAGIPSYVTQEEFSRYQGYWWQPKTTDGVYRILYEEID 109 (122)
Q Consensus 35 ~aFvr~~nLyv~~~~~~~~~rlT~~~~g~~~v~~~~i~~G~~d~v~eEE~~~~~g~wWSPd~~~~~~~iay~~~D 109 (122)
+++..+++||+.....+...++..+ +. .....+.+.- ...++....++.|+||++ +|.+...+
T Consensus 238 i~~d~~G~l~v~~~~~~~v~~~d~~--g~-----~~~~~~~~~~-~~g~~~~~~~~~~~~dg~----~L~v~~~~ 300 (333)
T 2dg1_A 238 CCIDSDDNLYVAMYGQGRVLVFNKR--GY-----PIGQILIPGR-DEGHMLRSTHPQFIPGTN----QLIICSND 300 (333)
T ss_dssp EEEBTTCCEEEEEETTTEEEEECTT--SC-----EEEEEECTTG-GGTCSCBCCEEEECTTSC----EEEEEEEC
T ss_pred eEECCCCCEEEEEcCCCEEEEECCC--CC-----EEEEEEcCCC-ccccccCcceEEECCCCC----EEEEEeCc
Confidence 7777888899887555555555333 21 1111111110 001122346778899987 76655544
No 89
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=38.79 E-value=1.1e+02 Score=22.16 Aligned_cols=27 Identities=11% Similarity=0.058 Sum_probs=20.8
Q ss_pred ceEEecCCCCCCceEEEEEEEcCCcceeEECCC
Q psy3287 88 QGYWWQPKTTDGVYRILYEEIDESDVKIYNFPS 120 (122)
Q Consensus 88 ~g~wWSPd~~~~~~~iay~~~Des~V~~~~~~~ 120 (122)
..+.||||++ .|+-.. +..|..+.+..
T Consensus 356 ~~~~~s~~g~----~l~s~s--d~~i~iw~~~~ 382 (383)
T 3ei3_B 356 SLNKFSPTGD----VLASGM--GFNILIWNRED 382 (383)
T ss_dssp CEEEECTTSS----EEEEEE--TTEEEEEECC-
T ss_pred EEEEEecCcc----EEEEec--CCcEEEEecCC
Confidence 4457999999 888884 57888888764
No 90
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=38.77 E-value=76 Score=23.77 Aligned_cols=27 Identities=7% Similarity=0.164 Sum_probs=19.5
Q ss_pred ceEEecCCCCCCceEEEEEEEcCCcceeEECC
Q psy3287 88 QGYWWQPKTTDGVYRILYEEIDESDVKIYNFP 119 (122)
Q Consensus 88 ~g~wWSPd~~~~~~~iay~~~Des~V~~~~~~ 119 (122)
..+.|||||+ +|+-..-| ..|+.+.+.
T Consensus 368 ~~l~~spdg~----~l~S~s~D-~tvriWdv~ 394 (420)
T 4gga_A 368 LSLTMSPDGA----TVASAAAD-ETLRLWRCF 394 (420)
T ss_dssp EEEEECTTSS----CEEEEETT-TEEEEECCS
T ss_pred EEEEEcCCCC----EEEEEecC-CeEEEEECC
Confidence 4567999999 88876655 447777664
No 91
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=38.44 E-value=64 Score=22.74 Aligned_cols=20 Identities=5% Similarity=0.092 Sum_probs=16.1
Q ss_pred cceEEecCCCCCCceEEEEEEEcC
Q psy3287 87 YQGYWWQPKTTDGVYRILYEEIDE 110 (122)
Q Consensus 87 ~~g~wWSPd~~~~~~~iay~~~De 110 (122)
-..+.||||++ +|+...-|+
T Consensus 318 v~~~~~s~~g~----~l~~~s~d~ 337 (368)
T 3mmy_A 318 ISACCFNHNGN----IFAYASSYD 337 (368)
T ss_dssp EEEEEECTTSS----CEEEEECCC
T ss_pred ceEEEECCCCC----eEEEEeccc
Confidence 45678999999 999887765
No 92
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=38.32 E-value=83 Score=23.62 Aligned_cols=27 Identities=19% Similarity=0.306 Sum_probs=21.8
Q ss_pred EEEE-EeCCEEEEeCCCCCeeEEecccc
Q psy3287 35 EEFS-RYQGYWWQPKTTGSTQRLTFAHK 61 (122)
Q Consensus 35 ~aFv-r~~nLyv~~~~~~~~~rlT~~~~ 61 (122)
++|. .++.|||.+...+...++..++.
T Consensus 78 l~~d~~~~~ly~~D~~~~~I~r~~~~g~ 105 (349)
T 3v64_C 78 LDFHHRRELVFWSDVTLDRILRANLNGS 105 (349)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred EEEeccccEEEEEeccCCceEEEecCCC
Confidence 6777 67889999998888888877744
No 93
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=38.17 E-value=1e+02 Score=21.54 Aligned_cols=28 Identities=4% Similarity=0.033 Sum_probs=21.1
Q ss_pred cceEEecCCCCCCceEEEEEEEcCCcceeEEC
Q psy3287 87 YQGYWWQPKTTDGVYRILYEEIDESDVKIYNF 118 (122)
Q Consensus 87 ~~g~wWSPd~~~~~~~iay~~~Des~V~~~~~ 118 (122)
-..+.||||++ +|+....+...|..+.+
T Consensus 86 ~~~~~~s~dg~----~l~~~~~~~~~i~~~d~ 113 (343)
T 1ri6_A 86 LTHISTDHQGQ----FVFVGSYNAGNVSVTRL 113 (343)
T ss_dssp CSEEEECTTSS----EEEEEETTTTEEEEEEE
T ss_pred CcEEEEcCCCC----EEEEEecCCCeEEEEEC
Confidence 46678999999 88777766666776655
No 94
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=35.69 E-value=67 Score=25.21 Aligned_cols=68 Identities=7% Similarity=0.017 Sum_probs=37.2
Q ss_pred EEEEE-eCCEEEEeCCCCCeeEEeccccCCcccCCCCeeeccCCccchheecccceEEecCCCCCCceEEEEEEEcCCcc
Q psy3287 35 EEFSR-YQGYWWQPKTTGSTQRLTFAHKGGRNLTDDPLAAGIPSYVTQEEFSRYQGYWWQPKTTDGVYRILYEEIDESDV 113 (122)
Q Consensus 35 ~aFvr-~~nLyv~~~~~~~~~rlT~~~~g~~~v~~~~i~~G~~d~v~eEE~~~~~g~wWSPd~~~~~~~iay~~~Des~V 113 (122)
+++.. +++||+.+...+..+++..+. +.. .......|.. ....++.++|+++ +|.+.......|
T Consensus 233 iavd~~~G~lyv~d~~~~~V~~~d~~~-g~~--~~~~~~~~~~--------~~~~~ia~dpdG~----~LYvad~~~~~I 297 (433)
T 4hw6_A 233 CAVHPQNGKIYYTRYHHAMISSYDPAT-GTL--TEEEVMMDTK--------GSNFHIVWHPTGD----WAYIIYNGKHCI 297 (433)
T ss_dssp CEECTTTCCEEECBTTCSEEEEECTTT-CCE--EEEEEECSCC--------SSCEEEEECTTSS----EEEEEETTTTEE
T ss_pred EEEeCCCCeEEEEECCCCEEEEEECCC-CeE--EEEEeccCCC--------CCcccEEEeCCCC----EEEEEeCCCCEE
Confidence 67776 889999987777777775541 110 0000011111 1123688999988 666655444444
Q ss_pred eeEE
Q psy3287 114 KIYN 117 (122)
Q Consensus 114 ~~~~ 117 (122)
..+.
T Consensus 298 ~~~~ 301 (433)
T 4hw6_A 298 YRVD 301 (433)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 4433
No 95
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=35.26 E-value=1.3e+02 Score=22.13 Aligned_cols=58 Identities=12% Similarity=0.102 Sum_probs=33.2
Q ss_pred EEEEEeCCEEEEeCCCCCeeEEeccccCCcccCCCCeeeccCCccchheecccceEEecCCCCCCceEEEEEEEcCCcce
Q psy3287 35 EEFSRYQGYWWQPKTTGSTQRLTFAHKGGRNLTDDPLAAGIPSYVTQEEFSRYQGYWWQPKTTDGVYRILYEEIDESDVK 114 (122)
Q Consensus 35 ~aFvr~~nLyv~~~~~~~~~rlT~~~~g~~~v~~~~i~~G~~d~v~eEE~~~~~g~wWSPd~~~~~~~iay~~~Des~V~ 114 (122)
++...++.|++.+..++...++...... ..-..+.||||++ +|+.... +..|.
T Consensus 107 ~~~~~d~~v~lw~~~~~~~~~~~~~~~~----------------------~~v~~v~~s~~~~----~l~~~~~-dg~i~ 159 (401)
T 4aez_A 107 VAVALERNVYVWNADSGSVSALAETDES----------------------TYVASVKWSHDGS----FLSVGLG-NGLVD 159 (401)
T ss_dssp EEEEETTEEEEEETTTCCEEEEEECCTT----------------------CCEEEEEECTTSS----EEEEEET-TSCEE
T ss_pred EEEECCCeEEEeeCCCCcEeEeeecCCC----------------------CCEEEEEECCCCC----EEEEECC-CCeEE
Confidence 4555667777777766654444332100 1134567999988 7766543 45566
Q ss_pred eEECC
Q psy3287 115 IYNFP 119 (122)
Q Consensus 115 ~~~~~ 119 (122)
.+.+.
T Consensus 160 iwd~~ 164 (401)
T 4aez_A 160 IYDVE 164 (401)
T ss_dssp EEETT
T ss_pred EEECc
Confidence 66543
No 96
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=33.86 E-value=1.2e+02 Score=21.23 Aligned_cols=27 Identities=7% Similarity=-0.008 Sum_probs=16.9
Q ss_pred ceEEecCCCCCCceEEEEEEEcCCcceeEECC
Q psy3287 88 QGYWWQPKTTDGVYRILYEEIDESDVKIYNFP 119 (122)
Q Consensus 88 ~g~wWSPd~~~~~~~iay~~~Des~V~~~~~~ 119 (122)
..+.||||++ +|+.... +..|..+.+.
T Consensus 78 ~~~~~~~~~~----~l~s~~~-dg~i~iwd~~ 104 (369)
T 3zwl_B 78 WSIDVDCFTK----YCVTGSA-DYSIKLWDVS 104 (369)
T ss_dssp EEEEECTTSS----EEEEEET-TTEEEEEETT
T ss_pred EEEEEcCCCC----EEEEEeC-CCeEEEEECC
Confidence 4567899888 7765543 4456665543
No 97
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=33.05 E-value=1.4e+02 Score=21.59 Aligned_cols=27 Identities=22% Similarity=0.524 Sum_probs=20.1
Q ss_pred ceEEecCCCCCCceEEEEEEEcCCcceeEECC
Q psy3287 88 QGYWWQPKTTDGVYRILYEEIDESDVKIYNFP 119 (122)
Q Consensus 88 ~g~wWSPd~~~~~~~iay~~~Des~V~~~~~~ 119 (122)
.++.||||++ +|+-.. ++..|..+.+|
T Consensus 294 ~~v~~s~~g~----~l~s~~-~d~~i~vwd~p 320 (321)
T 3ow8_A 294 WGVKYNGNGS----KIVSVG-DDQEIHIYDCP 320 (321)
T ss_dssp EEEEECTTSS----EEEEEE-TTCCEEEEECC
T ss_pred EEEEECCCCC----EEEEEe-CCCeEEEEeCC
Confidence 4567999998 877554 56778888765
No 98
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=32.93 E-value=37 Score=24.07 Aligned_cols=29 Identities=10% Similarity=0.203 Sum_probs=24.2
Q ss_pred ceEEecCCCCCCceEEEEEEEcCCcceeEECCC
Q psy3287 88 QGYWWQPKTTDGVYRILYEEIDESDVKIYNFPS 120 (122)
Q Consensus 88 ~g~wWSPd~~~~~~~iay~~~Des~V~~~~~~~ 120 (122)
..+.||||++ .|++.--++..|..+.+.+
T Consensus 325 ~~~~~s~~~~----~l~~s~~~d~~i~iw~~~~ 353 (357)
T 3i2n_A 325 SSLDWSPDKR----GLCVCSSFDQTVRVLIVTK 353 (357)
T ss_dssp EEEEECSSST----TEEEEEETTSEEEEEEECC
T ss_pred eEEEEcCCCC----eEEEEecCCCcEEEEECCC
Confidence 5678999999 9988777888899888765
No 99
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=32.85 E-value=67 Score=24.56 Aligned_cols=27 Identities=19% Similarity=0.306 Sum_probs=21.4
Q ss_pred EEEE-EeCCEEEEeCCCCCeeEEecccc
Q psy3287 35 EEFS-RYQGYWWQPKTTGSTQRLTFAHK 61 (122)
Q Consensus 35 ~aFv-r~~nLyv~~~~~~~~~rlT~~~~ 61 (122)
++|. .++.|||.+...+...++..++.
T Consensus 121 l~~d~~~~~ly~~D~~~~~I~r~~~~g~ 148 (386)
T 3v65_B 121 LDFHHRRELVFWSDVTLDRILRANLNGS 148 (386)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred EEEecCCCeEEEEeCCCCcEEEEecCCC
Confidence 7777 57889999988888888877743
No 100
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=32.63 E-value=1.5e+02 Score=23.41 Aligned_cols=25 Identities=12% Similarity=0.448 Sum_probs=18.3
Q ss_pred eEEecCCCCCCceEEEEEEEcCCcceeEEC
Q psy3287 89 GYWWQPKTTDGVYRILYEEIDESDVKIYNF 118 (122)
Q Consensus 89 g~wWSPd~~~~~~~iay~~~Des~V~~~~~ 118 (122)
..-|||||+ +|+-.. ++..|+.+.+
T Consensus 331 ~vafSPDG~----~LaSGS-~D~TIklWd~ 355 (356)
T 2w18_A 331 FVKWSGTDS----HLLAGQ-KDGNIFVYHY 355 (356)
T ss_dssp EEEECSSSS----EEEEEC-TTSCEEEEEE
T ss_pred EEEECCCCC----EEEEEE-CCCcEEEecC
Confidence 357999999 877665 5677777654
No 101
>2a13_A AT1G79260; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, unknown function; HET: MSE; 1.32A {Arabidopsis thaliana} SCOP: b.60.1.8 PDB: 2q4n_A 3emm_A*
Probab=32.43 E-value=91 Score=21.82 Aligned_cols=50 Identities=16% Similarity=0.273 Sum_probs=26.3
Q ss_pred EEeccccCCcccCCCCeeeccCCccchh--eecccceEE-ecCCCCCCceEEEEEEEcCCcce
Q psy3287 55 RLTFAHKGGRNLTDDPLAAGIPSYVTQE--EFSRYQGYW-WQPKTTDGVYRILYEEIDESDVK 114 (122)
Q Consensus 55 rlT~~~~g~~~v~~~~i~~G~~d~v~eE--E~~~~~g~w-WSPd~~~~~~~iay~~~Des~V~ 114 (122)
+|++.+.|. +.+.+.-..|...+ -|-+.+||| |.|+ . .|...-...+.+.
T Consensus 49 ei~fs~~G~-----p~L~Y~~~~w~~~~~~p~h~E~Gywr~~p~-~----~ve~~la~p~G~~ 101 (166)
T 2a13_A 49 EIRFSHSGK-----PVIAYTQKTWKLESGAPMHAESGYFRPRPD-G----SIEVVIAQSTGLV 101 (166)
T ss_dssp EEEEECCSS-----SCEEEEEEEECTTTCCEEEEEEEEEEECTT-S----EEEEEEEETTSCE
T ss_pred EEEEEeCCC-----CeEEEEEEEEECCCCCcceEeeEEEEECCC-C----cEEEEEEeCCceE
Confidence 444444453 34444444444333 367789997 7788 3 4444444444443
No 102
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=32.14 E-value=38 Score=23.81 Aligned_cols=16 Identities=13% Similarity=0.272 Sum_probs=12.5
Q ss_pred eEEEEEeCCEEEEeCC
Q psy3287 34 QEEFSRYQGYWWQPKT 49 (122)
Q Consensus 34 ~~aFvr~~nLyv~~~~ 49 (122)
.+++..+++||+....
T Consensus 121 ~i~~d~~g~l~v~~~~ 136 (314)
T 1pjx_A 121 DCAFDYEGNLWITAPA 136 (314)
T ss_dssp EEEECTTSCEEEEECB
T ss_pred CEEECCCCCEEEEecC
Confidence 4788888899998754
No 103
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=32.12 E-value=1.3e+02 Score=22.29 Aligned_cols=27 Identities=15% Similarity=0.306 Sum_probs=20.9
Q ss_pred EEEEE-eCCEEEEeCCCCCeeEEecccc
Q psy3287 35 EEFSR-YQGYWWQPKTTGSTQRLTFAHK 61 (122)
Q Consensus 35 ~aFvr-~~nLyv~~~~~~~~~rlT~~~~ 61 (122)
++|.. ++.|||.+...+...++..++.
T Consensus 40 ld~d~~~~~lyw~D~~~~~I~r~~~~g~ 67 (318)
T 3sov_A 40 VDFVFSHGLIYWSDVSEEAIKRTEFNKT 67 (318)
T ss_dssp EEEEGGGTEEEEEETTTTEEEEEETTSS
T ss_pred EEEEeCCCEEEEEECCCCcEEEEEccCC
Confidence 56663 6889999998888888877743
No 104
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=32.03 E-value=32 Score=24.22 Aligned_cols=28 Identities=18% Similarity=0.086 Sum_probs=20.3
Q ss_pred cceEEecCCCCCCceEEEEEEEcCCcceeEEC
Q psy3287 87 YQGYWWQPKTTDGVYRILYEEIDESDVKIYNF 118 (122)
Q Consensus 87 ~~g~wWSPd~~~~~~~iay~~~Des~V~~~~~ 118 (122)
-.++.||||++ +|++...+...|..+.+
T Consensus 40 ~~~~~~spdg~----~l~~~~~~~~~v~~~~~ 67 (343)
T 1ri6_A 40 VQPMVVSPDKR----YLYVGVRPEFRVLAYRI 67 (343)
T ss_dssp CCCEEECTTSS----EEEEEETTTTEEEEEEE
T ss_pred CceEEECCCCC----EEEEeecCCCeEEEEEe
Confidence 45678999998 88777766666666554
No 105
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=31.91 E-value=1.4e+02 Score=21.39 Aligned_cols=25 Identities=8% Similarity=-0.060 Sum_probs=20.4
Q ss_pred EEEEEeCCEEEEeCCCCCeeEEecc
Q psy3287 35 EEFSRYQGYWWQPKTTGSTQRLTFA 59 (122)
Q Consensus 35 ~aFvr~~nLyv~~~~~~~~~rlT~~ 59 (122)
+++..+++||+.+...+...++..+
T Consensus 37 ia~~~~g~lyv~d~~~~~I~~~d~~ 61 (306)
T 2p4o_A 37 LASAPDGTIFVTNHEVGEIVSITPD 61 (306)
T ss_dssp EEECTTSCEEEEETTTTEEEEECTT
T ss_pred EEECCCCCEEEEeCCCCeEEEECCC
Confidence 7887889999999888877777655
No 106
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=31.86 E-value=1.3e+02 Score=22.64 Aligned_cols=68 Identities=15% Similarity=0.117 Sum_probs=41.7
Q ss_pred EEEEE-------eCCEEEEeCCCCCeeEEeccccCCcccCCCCeeeccCCccchheecccceEEecCCCCCCceEEEEEE
Q psy3287 35 EEFSR-------YQGYWWQPKTTGSTQRLTFAHKGGRNLTDDPLAAGIPSYVTQEEFSRYQGYWWQPKTTDGVYRILYEE 107 (122)
Q Consensus 35 ~aFvr-------~~nLyv~~~~~~~~~rlT~~~~g~~~v~~~~i~~G~~d~v~eEE~~~~~g~wWSPd~~~~~~~iay~~ 107 (122)
++|.+ +++||+.+...+...+|..+ +. .. .+...++ ...+.|-.++...|||. +|.-
T Consensus 276 ~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~--~~-----~~--~~~~~~~-~~~~~rp~~v~~~pdG~------lyv~ 339 (353)
T 2g8s_A 276 MAFYNSDKFPQWQQKLFIGALKDKDVIVMSVN--GD-----KV--TEDGRIL-TDRGQRIRDVRTGPDGY------LYVL 339 (353)
T ss_dssp EEEECCSSSGGGTTEEEEEETTTTEEEEEEEE--TT-----EE--EEEEEES-GGGCCCEEEEEECTTSC------EEEE
T ss_pred eEEECCccCcccCCcEEEEEccCCEEEEEEeC--CC-----eE--eeeEEcc-cCCCCceeEEEECCCCc------EEEE
Confidence 67764 58999999988888888887 21 11 1111222 12235788899999987 5555
Q ss_pred EcCCcceeEEC
Q psy3287 108 IDESDVKIYNF 118 (122)
Q Consensus 108 ~Des~V~~~~~ 118 (122)
.|...=.++.|
T Consensus 340 td~~~g~I~ri 350 (353)
T 2g8s_A 340 TDESSGELLKV 350 (353)
T ss_dssp ECSTTEEEEEE
T ss_pred EeCCCCEEEEE
Confidence 55433344443
No 107
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=30.92 E-value=1.2e+02 Score=21.01 Aligned_cols=23 Identities=0% Similarity=-0.301 Sum_probs=15.0
Q ss_pred EEEEEeCCEEEEeCCCCCeeEEe
Q psy3287 35 EEFSRYQGYWWQPKTTGSTQRLT 57 (122)
Q Consensus 35 ~aFvr~~nLyv~~~~~~~~~rlT 57 (122)
+++..+++||+.....+...++.
T Consensus 126 i~~~~~g~l~v~~~~~~~i~~~~ 148 (286)
T 1q7f_A 126 VTVDNKGRIIVVECKVMRVIIFD 148 (286)
T ss_dssp EEECTTSCEEEEETTTTEEEEEC
T ss_pred EEEeCCCCEEEEECCCCEEEEEc
Confidence 67777778888875555444443
No 108
>1hks_A Heat-shock transcription factor; transcription regulation; NMR {Drosophila melanogaster} SCOP: a.4.5.22 PDB: 1hkt_A
Probab=30.61 E-value=8.5 Score=25.15 Aligned_cols=24 Identities=13% Similarity=0.477 Sum_probs=14.7
Q ss_pred ccCCccchh-ee-c---ccceEEecCCCC
Q psy3287 74 GIPSYVTQE-EF-S---RYQGYWWQPKTT 97 (122)
Q Consensus 74 G~~d~v~eE-E~-~---~~~g~wWSPd~~ 97 (122)
|+|.|+..- +| + ...-++|||+|+
T Consensus 3 ~~p~F~~KL~~mv~d~~~~~iI~W~~~G~ 31 (106)
T 1hks_A 3 GVPAFLAKLWRLVDDADTNRLICWTKDGQ 31 (106)
T ss_dssp TCCTTHHHHHHHHSSSTTTTTSEESTTTS
T ss_pred CcCcHHHHHHHHhcCCCCCCEEEEeCCCC
Confidence 455555542 33 2 235679999998
No 109
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=30.06 E-value=1.3e+02 Score=21.66 Aligned_cols=29 Identities=3% Similarity=0.115 Sum_probs=19.9
Q ss_pred ceEEecCCCCCCceEEEEEEEcCCcceeEECCC
Q psy3287 88 QGYWWQPKTTDGVYRILYEEIDESDVKIYNFPS 120 (122)
Q Consensus 88 ~g~wWSPd~~~~~~~iay~~~Des~V~~~~~~~ 120 (122)
..+-||||+. ++++.--.+..|..+.+..
T Consensus 309 ~~~~~s~~~~----~~l~s~~~d~~i~iw~~~~ 337 (416)
T 2pm9_A 309 FKTKFAPEAP----DLFACASFDNKIEVQTLQN 337 (416)
T ss_dssp CCEEECTTCT----TEEEECCSSSEEEEEESCC
T ss_pred EEEEECCCCC----CEEEEEecCCcEEEEEccC
Confidence 4678999995 4555555667777777654
No 110
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=29.22 E-value=1.7e+02 Score=21.43 Aligned_cols=29 Identities=7% Similarity=0.114 Sum_probs=21.1
Q ss_pred cceEEecCCCCCCceEEEEEEEcCCcceeEECC
Q psy3287 87 YQGYWWQPKTTDGVYRILYEEIDESDVKIYNFP 119 (122)
Q Consensus 87 ~~g~wWSPd~~~~~~~iay~~~Des~V~~~~~~ 119 (122)
-..+.||||++ +|+....++..|..+.+.
T Consensus 214 ~~~~~~~~~~~----~l~~~~~~~~~i~~~d~~ 242 (433)
T 3bws_A 214 SKILLYDPIRD----LVYCSNWISEDISVIDRK 242 (433)
T ss_dssp EEEEEEETTTT----EEEEEETTTTEEEEEETT
T ss_pred eeEEEEcCCCC----EEEEEecCCCcEEEEECC
Confidence 35678999998 887776666677766653
No 111
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=28.61 E-value=1.8e+02 Score=22.26 Aligned_cols=26 Identities=8% Similarity=0.001 Sum_probs=16.0
Q ss_pred EEEE-EeCCEEEEeCCC-CCeeEEeccc
Q psy3287 35 EEFS-RYQGYWWQPKTT-GSTQRLTFAH 60 (122)
Q Consensus 35 ~aFv-r~~nLyv~~~~~-~~~~rlT~~~ 60 (122)
+++. ..+.|||.+... +...++..+|
T Consensus 207 iavdp~~g~ly~td~~~~~~I~~~~~dG 234 (400)
T 3p5b_L 207 IVVDPVHGFMYWTDWGTPAKIKKGGLNG 234 (400)
T ss_dssp EEEETTTTEEEEEECSSSCCEEEEETTS
T ss_pred EEEecccCeEEEEeCCCCCEEEEEeCCC
Confidence 5665 356788887543 4566666663
No 112
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=28.49 E-value=1.5e+02 Score=20.98 Aligned_cols=26 Identities=19% Similarity=0.534 Sum_probs=16.8
Q ss_pred ceEEecCCCCCCceEEEEEEEcCCcceeEEC
Q psy3287 88 QGYWWQPKTTDGVYRILYEEIDESDVKIYNF 118 (122)
Q Consensus 88 ~g~wWSPd~~~~~~~iay~~~Des~V~~~~~ 118 (122)
..+.||||++ +|+... .+..|..+.+
T Consensus 56 ~~~~~~~~~~----~l~~~~-~dg~i~vwd~ 81 (372)
T 1k8k_C 56 TGVDWAPDSN----RIVTCG-TDRNAYVWTL 81 (372)
T ss_dssp EEEEEETTTT----EEEEEE-TTSCEEEEEE
T ss_pred cEEEEeCCCC----EEEEEc-CCCeEEEEEC
Confidence 5667899988 776654 4455655544
No 113
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=27.64 E-value=66 Score=25.13 Aligned_cols=68 Identities=12% Similarity=0.245 Sum_probs=42.7
Q ss_pred eCCEEEEeCCCCCeeEEeccccCCcccCCCCeeecc-----CCc-----cchheecccceEEecCCCCCCceEEEEEEEc
Q psy3287 40 YQGYWWQPKTTGSTQRLTFAHKGGRNLTDDPLAAGI-----PSY-----VTQEEFSRYQGYWWQPKTTDGVYRILYEEID 109 (122)
Q Consensus 40 ~~nLyv~~~~~~~~~rlT~~~~g~~~v~~~~i~~G~-----~d~-----v~eEE~~~~~g~wWSPd~~~~~~~iay~~~D 109 (122)
+++||+++......+++..+ |. -....|. ..| ..+-.|..-.++..+|++. .|..+-.+
T Consensus 351 ~g~lyvaD~~n~~I~~i~~~--G~-----v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g----~lyVaD~~ 419 (430)
T 3tc9_A 351 EYDFYFCDRENHCIRILTPQ--GR-----VTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERE----CFFIGDRE 419 (430)
T ss_dssp CEEEEEEEGGGTEEEEECTT--SE-----EEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTT----EEEEEEGG
T ss_pred CCeEEEEECCCcEEEEECCC--Cc-----EEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCC----EEEEEECC
Confidence 47999999877777777655 32 1111221 111 1223477789999999776 78777777
Q ss_pred CCcceeEEC
Q psy3287 110 ESDVKIYNF 118 (122)
Q Consensus 110 es~V~~~~~ 118 (122)
-..|..+.+
T Consensus 420 n~rIr~i~~ 428 (430)
T 3tc9_A 420 NRRIRKIGY 428 (430)
T ss_dssp GTEEEEEEE
T ss_pred CCeEEEEcc
Confidence 667766643
No 114
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=26.30 E-value=1.8e+02 Score=20.74 Aligned_cols=29 Identities=24% Similarity=0.437 Sum_probs=23.4
Q ss_pred cceEEecCCCCCCceEEEEEEEcCCcceeEECC
Q psy3287 87 YQGYWWQPKTTDGVYRILYEEIDESDVKIYNFP 119 (122)
Q Consensus 87 ~~g~wWSPd~~~~~~~iay~~~Des~V~~~~~~ 119 (122)
-..+-|+|+++ +|++.--.+..|..+.+.
T Consensus 189 v~~~~~~~~~~----~ll~~~~~dg~i~i~d~~ 217 (408)
T 4a11_B 189 ILAVSWSPRYD----YILATASADSRVKLWDVR 217 (408)
T ss_dssp EEEEEECSSCT----TEEEEEETTSCEEEEETT
T ss_pred EEEEEECCCCC----cEEEEEcCCCcEEEEECC
Confidence 35678999999 888888888888888763
No 115
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=26.22 E-value=2e+02 Score=21.34 Aligned_cols=16 Identities=6% Similarity=0.258 Sum_probs=10.9
Q ss_pred EecCCCCCCceEEEEEEEcC
Q psy3287 91 WWQPKTTDGVYRILYEEIDE 110 (122)
Q Consensus 91 wWSPd~~~~~~~iay~~~De 110 (122)
.++|++. +|.|...+.
T Consensus 59 ~i~~~g~----~Iyy~~~~~ 74 (302)
T 3s25_A 59 YINADKN----YVYYVRNNN 74 (302)
T ss_dssp EEEECSS----EEEEEEECC
T ss_pred eEEEcCC----EEEEEECCC
Confidence 4577777 777776654
No 116
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=25.77 E-value=1.9e+02 Score=21.02 Aligned_cols=21 Identities=5% Similarity=0.169 Sum_probs=15.7
Q ss_pred cceEEecCCCCCCceEEEEEEEcCC
Q psy3287 87 YQGYWWQPKTTDGVYRILYEEIDES 111 (122)
Q Consensus 87 ~~g~wWSPd~~~~~~~iay~~~Des 111 (122)
-.|+.||||++ .|.+...+..
T Consensus 197 ~~gia~s~dg~----~ly~~~~~~~ 217 (343)
T 2qe8_A 197 VNGIVLDAENE----WLYLSPMHST 217 (343)
T ss_dssp EEEEEECTTSC----EEEEEESSCS
T ss_pred cceeEeccCCC----EEEEEeCCCC
Confidence 46899999998 7777655543
No 117
>2cxa_A Leucyl/phenylalanyl-tRNA-protein transferase; aminoacyl-tRNA, protein degradation, structural genomics, NPPSFA; HET: MSE; 1.60A {Escherichia coli} SCOP: d.108.1.6 PDB: 2dps_A 2dpt_A* 2z3o_A* 2z3k_A* 2z3l_A* 2z3m_A* 2z3n_A* 2z3p_A*
Probab=25.54 E-value=23 Score=27.14 Aligned_cols=27 Identities=22% Similarity=0.621 Sum_probs=17.6
Q ss_pred eeccCCccchheecccceEEecCCCCCCceEEEEE
Q psy3287 72 AAGIPSYVTQEEFSRYQGYWWQPKTTDGVYRILYE 106 (122)
Q Consensus 72 ~~G~~d~v~eEE~~~~~g~wWSPd~~~~~~~iay~ 106 (122)
.+|+--|-.+. ..-+|||||-. -|++.
T Consensus 60 ~~GiFPw~~~~----~pilWwsP~pR----~Vl~p 86 (256)
T 2cxa_A 60 QRGIFPWFSPG----DPILWWSPDPR----AVLWP 86 (256)
T ss_dssp HHTCEECCCTT----SCCEEECCSSE----EEECG
T ss_pred hcCcccCCCCC----CccceECCCCC----EEecc
Confidence 35676665332 35679999987 66653
No 118
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=24.25 E-value=70 Score=26.90 Aligned_cols=23 Identities=9% Similarity=0.115 Sum_probs=14.7
Q ss_pred eecccceEEecCCCCCCceEEEEEEEc
Q psy3287 83 EFSRYQGYWWQPKTTDGVYRILYEEID 109 (122)
Q Consensus 83 E~~~~~g~wWSPd~~~~~~~iay~~~D 109 (122)
.+....|+.|+|++. +|.+.-..
T Consensus 538 ~l~~PnGlavd~~~~----~LY~aD~~ 560 (699)
T 1n7d_A 538 NIQWPNGITLDLLSG----RLYWVDSK 560 (699)
T ss_dssp SCSSCCCEEECTTTC----CEEEEETT
T ss_pred CCCCccEEEEeccCC----EEEEEecC
Confidence 355567888998876 55544433
No 119
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=23.78 E-value=57 Score=24.06 Aligned_cols=26 Identities=8% Similarity=-0.073 Sum_probs=16.8
Q ss_pred ceEEecCCCCCCceEEEEEEEcCCcceeEE
Q psy3287 88 QGYWWQPKTTDGVYRILYEEIDESDVKIYN 117 (122)
Q Consensus 88 ~g~wWSPd~~~~~~~iay~~~Des~V~~~~ 117 (122)
.++.|||||+ +|+....+...|..+.
T Consensus 196 ~~~~~spdg~----~l~v~~~~~~~v~v~~ 221 (365)
T 1jof_A 196 RWVAMHPTGN----YLYALMEAGNRICEYV 221 (365)
T ss_dssp EEEEECTTSS----EEEEEETTTTEEEEEE
T ss_pred CEeEECCCCC----EEEEEECCCCeEEEEE
Confidence 4568999998 7766544444555543
No 120
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=23.76 E-value=1.4e+02 Score=23.62 Aligned_cols=58 Identities=14% Similarity=0.104 Sum_probs=36.7
Q ss_pred eCCEEEEeCCCCCeeEEeccccCCcccCCCCeeeccC-CccchheecccceEEecCCCCCCceEEEEEEEcCC
Q psy3287 40 YQGYWWQPKTTGSTQRLTFAHKGGRNLTDDPLAAGIP-SYVTQEEFSRYQGYWWQPKTTDGVYRILYEEIDES 111 (122)
Q Consensus 40 ~~nLyv~~~~~~~~~rlT~~~~g~~~v~~~~i~~G~~-d~v~eEE~~~~~g~wWSPd~~~~~~~iay~~~Des 111 (122)
.++|++..+..+...+|..+.++. . ..+.+ +++. .+.|-..+-+.|||. . ||...|.+
T Consensus 368 ~g~lfv~~~~~~~i~~v~l~~~g~------~-~~~~~~~~~~--~~~R~~dv~~gpDG~----~-Lyv~~d~~ 426 (454)
T 1cru_A 368 ENTLLVPSLKRGVIFRIKLDPTYS------T-TYDDAVPMFK--SNNRYRDVIASPDGN----V-LYVLTDTA 426 (454)
T ss_dssp TTEEEEEBSSSCCEEEEEECTTSS------S-EEEEEEEESC--CSSCEEEEEECTTSS----C-EEEEECSS
T ss_pred CCcEEEeecCCCEEEEEEECCCCC------e-eeeeeeeecc--cCCCceeEEECCCCC----E-EEEEECCC
Confidence 478999999888889998885432 1 11111 1111 235888899999985 2 45555544
No 121
>2fr2_A Hypothetical protein RV2717C; beta barrel, fatty acid binding, structural genomics, PSI, P structure initiative; 1.50A {Mycobacterium tuberculosis} SCOP: b.60.1.8
Probab=23.76 E-value=1.2e+02 Score=21.33 Aligned_cols=13 Identities=15% Similarity=0.130 Sum_probs=10.0
Q ss_pred ecccceEE-ecCCC
Q psy3287 84 FSRYQGYW-WQPKT 96 (122)
Q Consensus 84 ~~~~~g~w-WSPd~ 96 (122)
|-+.+||| |.|++
T Consensus 64 ~h~E~Gfwr~~~~g 77 (172)
T 2fr2_A 64 LHSETGYLRVCRPG 77 (172)
T ss_dssp EEEEEEEEEESSTT
T ss_pred ceEeeEEEEECCCC
Confidence 67789997 77874
No 122
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=23.31 E-value=1.7e+02 Score=21.39 Aligned_cols=18 Identities=17% Similarity=0.075 Sum_probs=14.1
Q ss_pred ceEEecCCCCCCceEEEEEEEc
Q psy3287 88 QGYWWQPKTTDGVYRILYEEID 109 (122)
Q Consensus 88 ~g~wWSPd~~~~~~~iay~~~D 109 (122)
..+.||||++ +||-...|
T Consensus 330 ~~l~~spdg~----~l~sgs~D 347 (354)
T 2pbi_B 330 STLRVSPDGT----AFCSGSWD 347 (354)
T ss_dssp EEEEECTTSS----CEEEEETT
T ss_pred EEEEECCCCC----EEEEEcCC
Confidence 4678999999 88876644
No 123
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=23.16 E-value=1.9e+02 Score=21.06 Aligned_cols=26 Identities=4% Similarity=0.074 Sum_probs=18.8
Q ss_pred EEEEE-eCCEEEEeCCCCCeeEEeccc
Q psy3287 35 EEFSR-YQGYWWQPKTTGSTQRLTFAH 60 (122)
Q Consensus 35 ~aFvr-~~nLyv~~~~~~~~~rlT~~~ 60 (122)
++|.. ++.|||.+...+...++..++
T Consensus 35 ~~~d~~~~~ly~~D~~~~~I~~~~~~g 61 (316)
T 1ijq_A 35 LDTEVASNRIYWSDLSQRMICSTQLDR 61 (316)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEEC--
T ss_pred EEEEeCCCEEEEEECCCCcEEEEECCC
Confidence 67764 578999998888777877664
No 124
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=23.11 E-value=1.3e+02 Score=23.34 Aligned_cols=75 Identities=8% Similarity=0.092 Sum_probs=0.0
Q ss_pred EEEEEeCCEEEEeCCCCCeeEEeccccCCcccCCCCeeeccCCccchheecccceEEecCC--CCCCceEEEEEEE---c
Q psy3287 35 EEFSRYQGYWWQPKTTGSTQRLTFAHKGGRNLTDDPLAAGIPSYVTQEEFSRYQGYWWQPK--TTDGVYRILYEEI---D 109 (122)
Q Consensus 35 ~aFvr~~nLyv~~~~~~~~~rlT~~~~g~~~v~~~~i~~G~~d~v~eEE~~~~~g~wWSPd--~~~~~~~iay~~~---D 109 (122)
++|.-++.||+.....|+.++|+-+... .....++++ |..+-....-++.++|| .+ ..+|+.. +
T Consensus 37 ia~~pdG~llVter~~G~I~~v~~~~g~------~~~v~~~~~-v~~~g~~GllGia~~Pdf~~~----g~lYv~yt~~~ 105 (347)
T 3das_A 37 LAPLPGGDLLVSSRDEATITRVDAKTGR------KTELGEVPG-VSPSGEGGLLGIALSPDYASD----HMVYAYFTSAS 105 (347)
T ss_dssp EEECTTSCEEEEETTTCEEEEECTTTCC------EEEEEECTT-CCCBTTBSEEEEEECTTHHHH----CEEEEEEECSS
T ss_pred EEEcCCCcEEEEEecCCEEEEEECCCCc------EeeecccCc-eeecCCCCceeeEeccccccC----CEEEEEEecCC
Q ss_pred CCcceeEECCC
Q psy3287 110 ESDVKIYNFPS 120 (122)
Q Consensus 110 es~V~~~~~~~ 120 (122)
...|-.+.+..
T Consensus 106 ~~~v~R~~~~~ 116 (347)
T 3das_A 106 DNRIVRMLYDE 116 (347)
T ss_dssp SEEEEEEEBCT
T ss_pred CCEEEEEEeCC
No 125
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=22.88 E-value=1.9e+02 Score=19.89 Aligned_cols=27 Identities=7% Similarity=0.079 Sum_probs=19.5
Q ss_pred cceEEecCCCCCCceEEEEEEEcCCcceeEEC
Q psy3287 87 YQGYWWQPKTTDGVYRILYEEIDESDVKIYNF 118 (122)
Q Consensus 87 ~~g~wWSPd~~~~~~~iay~~~Des~V~~~~~ 118 (122)
-..+.||||++ +|+... ++..|..+.+
T Consensus 309 v~~~~~s~~~~----~l~~~~-~dg~i~iw~~ 335 (337)
T 1gxr_A 309 VLSCDISVDDK----YIVTGS-GDKKATVYEV 335 (337)
T ss_dssp EEEEEECTTSC----EEEEEE-TTSCEEEEEE
T ss_pred EEEEEECCCCC----EEEEec-CCCeEEEEEE
Confidence 45678999998 777655 5666777665
No 126
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=21.89 E-value=65 Score=23.72 Aligned_cols=28 Identities=11% Similarity=0.209 Sum_probs=17.1
Q ss_pred cceEEecCCCCCCceEEEEEEEcCCcceeEEC
Q psy3287 87 YQGYWWQPKTTDGVYRILYEEIDESDVKIYNF 118 (122)
Q Consensus 87 ~~g~wWSPd~~~~~~~iay~~~Des~V~~~~~ 118 (122)
..+..|||||+ +|+..-.....|..+.+
T Consensus 147 ~~~~~~spdG~----~l~~~~~~~~~v~~~~~ 174 (365)
T 1jof_A 147 IHGMVFDPTET----YLYSADLTANKLWTHRK 174 (365)
T ss_dssp EEEEEECTTSS----EEEEEETTTTEEEEEEE
T ss_pred ceEEEECCCCC----EEEEEcCCCCEEEEEEE
Confidence 34668999998 76554433344554443
No 127
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=21.76 E-value=1.7e+02 Score=22.35 Aligned_cols=26 Identities=4% Similarity=0.092 Sum_probs=18.7
Q ss_pred EEEE-EeCCEEEEeCCCCCeeEEeccc
Q psy3287 35 EEFS-RYQGYWWQPKTTGSTQRLTFAH 60 (122)
Q Consensus 35 ~aFv-r~~nLyv~~~~~~~~~rlT~~~ 60 (122)
++|. +++.|||.+...+..+++..++
T Consensus 117 l~~d~~~~~lywsD~~~~~I~~~~~~g 143 (400)
T 3p5b_L 117 LDTEVASNRIYWSDLSQRMICSTQLDR 143 (400)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEEC--
T ss_pred EeeeeccCceEEEecCCCeEEEEEccc
Confidence 6776 4678999998888777776663
No 128
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=20.81 E-value=84 Score=24.23 Aligned_cols=28 Identities=14% Similarity=0.190 Sum_probs=0.0
Q ss_pred ceEEecCCCCCCceEEEEEEEcCCcceeEECCCC
Q psy3287 88 QGYWWQPKTTDGVYRILYEEIDESDVKIYNFPSS 121 (122)
Q Consensus 88 ~g~wWSPd~~~~~~~iay~~~Des~V~~~~~~~~ 121 (122)
..+.||||++ +||+.. +..|..+.+..+
T Consensus 22 ~~~~~spdg~----~l~~~~--~~~v~v~~~~~~ 49 (615)
T 1pgu_A 22 THLSYDPTTN----AIAYPC--GKSAFVRCLDDG 49 (615)
T ss_dssp CCCEEETTTT----EEEEEE--TTEEEEEECCSS
T ss_pred eEEEECCCCC----EEEEec--CCeEEEEECCCC
No 129
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=20.28 E-value=2.6e+02 Score=20.53 Aligned_cols=26 Identities=12% Similarity=0.353 Sum_probs=17.2
Q ss_pred ceEEecCCCCCCceEEEEEEEcCCcceeEEC
Q psy3287 88 QGYWWQPKTTDGVYRILYEEIDESDVKIYNF 118 (122)
Q Consensus 88 ~g~wWSPd~~~~~~~iay~~~Des~V~~~~~ 118 (122)
..+-|+||++ +|+... ++..|..+.+
T Consensus 169 ~~~~~~p~~~----~l~s~s-~d~~v~iwd~ 194 (393)
T 1erj_A 169 YSLDYFPSGD----KLVSGS-GDRTVRIWDL 194 (393)
T ss_dssp EEEEECTTSS----EEEEEE-TTSEEEEEET
T ss_pred EEEEEcCCCC----EEEEec-CCCcEEEEEC
Confidence 4567999998 776554 4455666654
No 130
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=20.22 E-value=2.3e+02 Score=20.71 Aligned_cols=27 Identities=11% Similarity=0.210 Sum_probs=16.9
Q ss_pred ceEEecCCCCCCceEEEEEEEcCCcceeEEC
Q psy3287 88 QGYWWQPKTTDGVYRILYEEIDESDVKIYNF 118 (122)
Q Consensus 88 ~g~wWSPd~~~~~~~iay~~~Des~V~~~~~ 118 (122)
..+.|||++. +++..--++..|..+.+
T Consensus 273 ~~l~~sp~~~----~~lasgs~D~~i~iwd~ 299 (357)
T 4g56_B 273 TGLAYSYHSS----PFLASISEDCTVAVLDA 299 (357)
T ss_dssp EEEEECSSSS----CCEEEEETTSCEEEECT
T ss_pred EEEEEcCCCC----CEEEEEeCCCEEEEEEC
Confidence 4567888886 55544445566666654
No 131
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=20.04 E-value=2e+02 Score=23.23 Aligned_cols=64 Identities=6% Similarity=-0.032 Sum_probs=0.0
Q ss_pred cceece----EEEEEeCCEEEEeCCCCCeeEEeccccCCcccCCCCeeeccCCccchheecccceEEecCCCCCCceEEE
Q psy3287 29 PSYVTQ----EEFSRYQGYWWQPKTTGSTQRLTFAHKGGRNLTDDPLAAGIPSYVTQEEFSRYQGYWWQPKTTDGVYRIL 104 (122)
Q Consensus 29 ~~f~~~----~aFvr~~nLyv~~~~~~~~~rlT~~~~g~~~v~~~~i~~G~~d~v~eEE~~~~~g~wWSPd~~~~~~~ia 104 (122)
..|+++ ++-..++.+.+.+..++...+....+.+. -..+-||||++ +|+
T Consensus 19 i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~-----------------------v~~~~~s~~~~----~l~ 71 (814)
T 3mkq_A 19 IDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETP-----------------------VRAGKFIARKN----WII 71 (814)
T ss_dssp EEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSC-----------------------EEEEEEEGGGT----EEE
T ss_pred EEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCc-----------------------EEEEEEeCCCC----EEE
Q ss_pred EEEEcCCcceeEECCC
Q psy3287 105 YEEIDESDVKIYNFPS 120 (122)
Q Consensus 105 y~~~Des~V~~~~~~~ 120 (122)
.... +..|..+.+..
T Consensus 72 ~~~~-dg~i~vw~~~~ 86 (814)
T 3mkq_A 72 VGSD-DFRIRVFNYNT 86 (814)
T ss_dssp EEET-TSEEEEEETTT
T ss_pred EEeC-CCeEEEEECCC
Done!