BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3289
(189 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|322789344|gb|EFZ14656.1| hypothetical protein SINV_08316 [Solenopsis invicta]
Length = 165
Score = 142 bits (357), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 79/151 (52%), Positives = 101/151 (66%), Gaps = 4/151 (2%)
Query: 27 GYGSTGASYGKKNFRKFNWIN-RGTQQHREEQKLNPDPRF-TPTYGVRKVLQTSDGRPVV 84
G ++ GK+NFRKF N RG++ +E+Q NPDP GVR + R +V
Sbjct: 11 GIATSCVCNGKRNFRKFIIYNKRGSRSFKEQQAKNPDPEIPIDKRGVRDIGYKVGDRFIV 70
Query: 85 --ETIPELIVPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINKDFEANKLDED 142
E IPELIVP+LEGF LKPYVSY+ I PEFTA+DLF VY++KI +DFE +LDE+
Sbjct: 71 VPEMIPELIVPSLEGFTLKPYVSYKAEGITEPEFTAQDLFDVVYSKKIKEDFEKGQLDEN 130
Query: 143 GNPLQPSDNELLTPEEAEKRARKTGSDLFDQ 173
G PL PS+ E LTP++A+ A KTGSDLF+Q
Sbjct: 131 GEPLNPSEYEKLTPQQAKDEAGKTGSDLFNQ 161
>gi|156538389|ref|XP_001605563.1| PREDICTED: 39S ribosomal protein L41, mitochondrial-like [Nasonia
vitripennis]
Length = 175
Score = 139 bits (350), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 79/155 (50%), Positives = 102/155 (65%), Gaps = 6/155 (3%)
Query: 22 LVSGSGYGSTGASYGKKNFRKFNWIN-RGTQQHREEQKLNPDPRF-TPTYGVRKVLQTSD 79
L+ G ++ A YGK+NFRKF IN RGT+ ++ Q +PDPR+ GVR V D
Sbjct: 6 LIITRGISTSCARYGKRNFRKFTLINKRGTRIFKKMQAEDPDPRYPIDKRGVRDV-GYMD 64
Query: 80 GRPVVE---TIPELIVPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINKDFEA 136
G+ VE IPELIVPNLEGF LKPYV+Y+ E++ FTA+DLF VYA KI +D+
Sbjct: 65 GKKFVEIPEMIPELIVPNLEGFKLKPYVTYKVTEVKNEVFTAEDLFYSVYANKIREDYNK 124
Query: 137 NKLDEDGNPLQPSDNELLTPEEAEKRARKTGSDLF 171
KL +G PL+PS ELLTP+EA + A K G+D+F
Sbjct: 125 GKLGPNGEPLEPSPEELLTPKEARELASKPGNDIF 159
>gi|307171303|gb|EFN63228.1| 39S ribosomal protein L41, mitochondrial [Camponotus floridanus]
Length = 165
Score = 135 bits (340), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 72/158 (45%), Positives = 99/158 (62%), Gaps = 4/158 (2%)
Query: 19 GGALVSGSGYGSTGASYGKKNFRKFNWIN-RGTQQHREEQKLNPDPRF-TPTYGVRKVLQ 76
++ G ++ +GK+NFRKF N RG++ + +Q NPD GVR +
Sbjct: 3 SSCMILRRGIATSCVCHGKRNFRKFLLYNKRGSRNFKMQQAKNPDSDIPIDKRGVRDIGY 62
Query: 77 TSDGRPVV--ETIPELIVPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINKDF 134
D R V+ E IPELIVP+LEGF LKPYVSY+ P+FTA+DLF VY++KI +DF
Sbjct: 63 KIDDRFVIVPEMIPELIVPSLEGFTLKPYVSYKVEMFTEPQFTAQDLFDAVYSKKIKEDF 122
Query: 135 EANKLDEDGNPLQPSDNELLTPEEAEKRARKTGSDLFD 172
N+LDE G P+ P++ E LTP++A+ A KTG D+FD
Sbjct: 123 TNNQLDEKGEPVNPNEYEKLTPQQAKDNASKTGCDIFD 160
>gi|332019225|gb|EGI59735.1| 39S ribosomal protein L41, mitochondrial [Acromyrmex echinatior]
Length = 165
Score = 135 bits (339), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 73/150 (48%), Positives = 101/150 (67%), Gaps = 4/150 (2%)
Query: 29 GSTGASYGKKNFRKFN-WINRGTQQHREEQKLNPDPRF-TPTYGVRKVLQTSDGR--PVV 84
++ GK+NFRKF + RG++ +++Q PDP GVR + R V
Sbjct: 13 ATSCVCNGKRNFRKFLLYGKRGSRNFKQQQAKKPDPDIPIDKRGVRDIGYQVGNRFVQVP 72
Query: 85 ETIPELIVPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINKDFEANKLDEDGN 144
E IPELIVP+LEGF LKPYVSYR EI+ PEFTA+DLF VY++K+ +DF + +LDE+G
Sbjct: 73 EMIPELIVPSLEGFTLKPYVSYRVGEIREPEFTAQDLFDVVYSKKVKEDFASGQLDENGE 132
Query: 145 PLQPSDNELLTPEEAEKRARKTGSDLFDQE 174
PL PS+ E LTP++A+++A KTG DLF ++
Sbjct: 133 PLNPSEYEKLTPQQAKEQAEKTGCDLFSEK 162
>gi|62083365|gb|AAX62407.1| putative mitochondrial ribosomal protein L41 [Lysiphlebus
testaceipes]
Length = 176
Score = 133 bits (334), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 72/158 (45%), Positives = 100/158 (63%), Gaps = 4/158 (2%)
Query: 21 ALVSGSGYGSTGASYGKKNFRKFNWIN-RGTQQHREEQKLNPDPRF-TPTYGVRKV--LQ 76
A+ G ++ G+KNFRKF+ N RGT++ +E Q++ P P G R +
Sbjct: 6 AMKFCRGISTSSVCCGRKNFRKFDLPNKRGTREFKERQRVQPHPDIPIDKRGTRDTGYMD 65
Query: 77 TSDGRPVVETIPELIVPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINKDFEA 136
+ + + E IPELIVP+L+ F LKPYVSYR+ + EFTAKDLF +Y EKI+KDF A
Sbjct: 66 GKNYKMIPEMIPELIVPDLKDFTLKPYVSYRSLNVTQSEFTAKDLFNAIYTEKIHKDFAA 125
Query: 137 NKLDEDGNPLQPSDNELLTPEEAEKRARKTGSDLFDQE 174
KL EDG P++P++ E LTP++A A KTG D+F +E
Sbjct: 126 GKLKEDGQPIEPNEFEKLTPQQALDNATKTGCDIFTEE 163
>gi|391344802|ref|XP_003746684.1| PREDICTED: 39S ribosomal protein L41, mitochondrial-like
[Metaseiulus occidentalis]
Length = 157
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/148 (47%), Positives = 93/148 (62%), Gaps = 6/148 (4%)
Query: 29 GSTGASYGKKNFRKFNWINRGTQQHREEQKLNPDPRFTPTYGVRKVLQTSDGRPVVETIP 88
++ A GK+NFRKF NRG+ K+NP P G R + E IP
Sbjct: 11 STSCARLGKRNFRKFQMSNRGSIH----DKMNPGPE--EYVGARMPTMEGSSEIIPEMIP 64
Query: 89 ELIVPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINKDFEANKLDEDGNPLQP 148
EL+VP+LEGF LKPYVSY E+ EFTA++LF +Y EKI DF+A KLDE GN L+P
Sbjct: 65 ELVVPDLEGFKLKPYVSYNVPEVNQSEFTAENLFEAMYTEKIEADFKAGKLDEHGNSLEP 124
Query: 149 SDNELLTPEEAEKRARKTGSDLFDQEVD 176
S++E+L EEA+ RA++TG+D F++ D
Sbjct: 125 SEDEMLGYEEAKARAQRTGADYFNRFWD 152
>gi|242012485|ref|XP_002426963.1| mitochondrial 50S ribosomal protein L41, putative [Pediculus
humanus corporis]
gi|212511192|gb|EEB14225.1| mitochondrial 50S ribosomal protein L41, putative [Pediculus
humanus corporis]
Length = 166
Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 74/140 (52%), Positives = 96/140 (68%), Gaps = 4/140 (2%)
Query: 36 GKKNFRKFNWIN-RGTQQHREEQKLNPDPRF-TPTYGVRKVLQTSDGRP--VVETIPELI 91
GKKNFR+F N RG+ R++Q+ NP P YGVR+ T + + V E IPE+I
Sbjct: 26 GKKNFRQFPLYNFRGSMAFRKKQQENPHPNIPIYKYGVREPGYTINNKFHFVPEMIPEII 85
Query: 92 VPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINKDFEANKLDEDGNPLQPSDN 151
VP+L F LKPYVSYR+++I EFTAKDLF +Y+EKI DF KLDEDGN L+P++
Sbjct: 86 VPDLTDFTLKPYVSYRSSDIMQTEFTAKDLFDAIYSEKIQNDFYKGKLDEDGNSLEPNNY 145
Query: 152 ELLTPEEAEKRARKTGSDLF 171
E +T EEAE A++TGSD+F
Sbjct: 146 EKMTEEEAELLAKQTGSDIF 165
>gi|157129933|ref|XP_001661823.1| mitochondrial ribosomal protein, L41, putative [Aedes aegypti]
gi|108872014|gb|EAT36239.1| AAEL011666-PA [Aedes aegypti]
Length = 158
Score = 129 bits (323), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 75/151 (49%), Positives = 97/151 (64%), Gaps = 6/151 (3%)
Query: 27 GYGSTGASYGKKNFRKFNWIN-RGTQQHREEQKLNPD--PRF-TPTYGVRKVLQTSDGR- 81
G ++ A GK NFRKF N RGT+ ++ + NP+ P GVR T DG+
Sbjct: 8 GISTSAAVAGKHNFRKFLLYNKRGTRIFKQLRAANPEQYPDMPIDKRGVRDTGVTRDGKY 67
Query: 82 -PVVETIPELIVPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINKDFEANKLD 140
+ E IPELIVPNL+G KPYVSYR E+ EFT++DLF VYA+K+ DF++ L+
Sbjct: 68 HEIAEKIPELIVPNLDGCKFKPYVSYRAPEVIQSEFTSQDLFNAVYAQKVIDDFKSGNLN 127
Query: 141 EDGNPLQPSDNELLTPEEAEKRARKTGSDLF 171
EDG P +PS+ E LTPEEA RARK+GSD+F
Sbjct: 128 EDGTPKEPSEVEKLTPEEAWIRARKSGSDMF 158
>gi|389610033|dbj|BAM18628.1| mitochondrial ribosomal protein L41 [Papilio xuthus]
Length = 162
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/158 (48%), Positives = 100/158 (63%), Gaps = 13/158 (8%)
Query: 22 LVSGSGYGSTGASYGKKNFRKFNWIN-RGTQQHREEQ-----KLNPDPRFTPTYGVRKVL 75
LVS G T A GK+NFRKF N RG++ H+E+Q +L D R GVR V
Sbjct: 10 LVSKRGICLTAAREGKRNFRKFVIPNKRGSRIHKEQQMSANRELEIDKR-----GVRDVG 64
Query: 76 QTSDGR--PVVETIPELIVPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINKD 133
+G+ V E IPE+IVP+L F LKPYVSY+ ++ EFTA+ LF +Y++KI KD
Sbjct: 65 YELNGKFVKVPEMIPEIIVPDLTDFKLKPYVSYKAEDVIQSEFTAEHLFNAIYSKKIAKD 124
Query: 134 FEANKLDEDGNPLQPSDNELLTPEEAEKRARKTGSDLF 171
F+ KLD +G PL+PS+ E L EEA RA++TGSD+F
Sbjct: 125 FQEGKLDSEGQPLEPSEEEKLQAEEAVIRAKRTGSDIF 162
>gi|91081117|ref|XP_975525.1| PREDICTED: similar to mitochondrial ribosomal protein, L41,
putative [Tribolium castaneum]
gi|270006026|gb|EFA02474.1| hypothetical protein TcasGA2_TC008165 [Tribolium castaneum]
Length = 159
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/157 (49%), Positives = 102/157 (64%), Gaps = 10/157 (6%)
Query: 22 LVSGSGYGSTGASYGKKNFRKFNWIN-RGTQQHREEQKLNPDPRFTPTY---GVRKV-LQ 76
L G ++ A +GK+NFRKF N RG++ +E +K DP + + G+R V
Sbjct: 6 LFIKRGISTSCARFGKRNFRKFPIYNKRGSKIFKEMRK---DPNYDLPHDKRGLRDVGYY 62
Query: 77 TSDGRPVV--ETIPELIVPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINKDF 134
DG V+ E IPELIVP+L+ F LKPYVSYRT ++ EFTA+DLF VYA KI KDF
Sbjct: 63 ADDGTFVLVPEKIPELIVPDLKDFPLKPYVSYRTPDVMQSEFTAEDLFNVVYAPKIAKDF 122
Query: 135 EANKLDEDGNPLQPSDNELLTPEEAEKRARKTGSDLF 171
+ KL+EDG PL+PS E +TPEEA +A +TGSD+F
Sbjct: 123 KEGKLNEDGTPLEPSPEERMTPEEARIKAEQTGSDIF 159
>gi|347965380|ref|XP_003435754.1| AGAP013376-PA [Anopheles gambiae str. PEST]
gi|333470538|gb|EGK97659.1| AGAP013376-PA [Anopheles gambiae str. PEST]
Length = 158
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 99/153 (64%), Gaps = 10/153 (6%)
Query: 27 GYGSTGASYGKKNFRKFNWIN-RGTQQHREEQKLNPDPRFTPTY-----GVRKVLQTSDG 80
G +T + GKKNFRKF N RGT+ ++++ NPD P GVR T DG
Sbjct: 8 GISTTASLSGKKNFRKFLLYNKRGTRIFKQQRAANPD--LYPDMPIDKRGVRDTGVTIDG 65
Query: 81 R--PVVETIPELIVPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINKDFEANK 138
+ E IPELIVPN+EG KPYVSY+ ++ EFT++DLF VYA+KI D+++ K
Sbjct: 66 NFVEIAEKIPELIVPNMEGCKFKPYVSYKAPDVVQSEFTSQDLFNSVYAQKIIDDWKSGK 125
Query: 139 LDEDGNPLQPSDNELLTPEEAEKRARKTGSDLF 171
L++DG+P++PS E+ + EEA +ARKTGSD+F
Sbjct: 126 LNDDGSPMEPSAEEMQSAEEAWIKARKTGSDIF 158
>gi|195123299|ref|XP_002006145.1| GI20877 [Drosophila mojavensis]
gi|193911213|gb|EDW10080.1| GI20877 [Drosophila mojavensis]
Length = 166
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/149 (48%), Positives = 95/149 (63%), Gaps = 4/149 (2%)
Query: 27 GYGSTGASYGKKNFRKFN-WINRGTQQHREEQKLNPDPRF-TPTYGVRKVLQTSDGR--P 82
+T GK+NFRKFN + RGT+ +E Q+ +P GVR T +G+
Sbjct: 18 AISTTAPVAGKRNFRKFNVYSKRGTRVVKEAQRTMANPPVPIQKRGVRDTGITINGQYVE 77
Query: 83 VVETIPELIVPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINKDFEANKLDED 142
+ E IPE+IVP+L G LKPYVSY+ E+ EFT+ DLF VYAEKI D++A KL+ D
Sbjct: 78 IPEKIPEIIVPDLTGCKLKPYVSYKAPEVVQSEFTSLDLFNAVYAEKIMADYKAGKLEAD 137
Query: 143 GNPLQPSDNELLTPEEAEKRARKTGSDLF 171
G+ +PS+NE LTPE A RARKTGSD+F
Sbjct: 138 GSSKEPSENEQLTPEVALMRARKTGSDIF 166
>gi|312385916|gb|EFR30304.1| hypothetical protein AND_00161 [Anopheles darlingi]
Length = 158
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/151 (48%), Positives = 100/151 (66%), Gaps = 10/151 (6%)
Query: 29 GSTGASYGKKNFRKFNWIN-RGTQQHREEQKLNPDPRFTPTY-----GVRKVLQTSDGR- 81
+T + GK+NFRKF N RGT+ ++++ NPD P GVR T DG+
Sbjct: 10 STTASLAGKRNFRKFLLYNKRGTRIFKQQRAANPD--LYPDMPIDKRGVRDTGVTVDGKF 67
Query: 82 -PVVETIPELIVPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINKDFEANKLD 140
+ E IPELIVPNL+G LKPYVSY+ ++ EFT++DLF VY++KI D+++ KL+
Sbjct: 68 VEIPERIPELIVPNLKGCKLKPYVSYKAPDVVQSEFTSQDLFNAVYSQKIIDDWKSGKLN 127
Query: 141 EDGNPLQPSDNELLTPEEAEKRARKTGSDLF 171
EDG+P +PS E+LT EEA +ARKTGSD+F
Sbjct: 128 EDGSPAEPSTEEVLTKEEAWIKARKTGSDMF 158
>gi|195025016|ref|XP_001985983.1| GH20793 [Drosophila grimshawi]
gi|193901983|gb|EDW00850.1| GH20793 [Drosophila grimshawi]
Length = 166
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/150 (50%), Positives = 96/150 (64%), Gaps = 6/150 (4%)
Query: 27 GYGSTGASYGKKNFRKFN-WINRGTQQHREEQK--LNPDPRFTPTYGVRKVLQTSDGR-- 81
ST A GK+NFRKFN + RGT+ +E Q+ NP P GVR T +G+
Sbjct: 18 AVSSTAAMAGKRNFRKFNVYSKRGTRVVKEAQRTLANP-PVAIHKRGVRDTGITLNGQFV 76
Query: 82 PVVETIPELIVPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINKDFEANKLDE 141
+ E IP++IVP+L G LKPYVSY+ E+ E+T+ DLF VY++KI +DF+A KLD
Sbjct: 77 EIPEKIPDIIVPDLTGCKLKPYVSYKAPEVIQSEYTSLDLFNAVYSQKIIEDFKAGKLDA 136
Query: 142 DGNPLQPSDNELLTPEEAEKRARKTGSDLF 171
DG +PS NE LTPE A RARKTGSD+F
Sbjct: 137 DGKATEPSPNEQLTPEIALMRARKTGSDIF 166
>gi|195583590|ref|XP_002081600.1| GD25631 [Drosophila simulans]
gi|194193609|gb|EDX07185.1| GD25631 [Drosophila simulans]
Length = 166
Score = 126 bits (316), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/141 (53%), Positives = 95/141 (67%), Gaps = 6/141 (4%)
Query: 36 GKKNFRKFNWIN-RGTQQHREEQK--LNPDPRFTPTYGVRKVLQTSDGR--PVVETIPEL 90
GK+NFRKFN N RGT+ +E QK NP P GVR DG+ + E IPE+
Sbjct: 27 GKRNFRKFNAYNKRGTRVVKEAQKTLANP-PVAIHKRGVRDTGILVDGQYVEIPEKIPEI 85
Query: 91 IVPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINKDFEANKLDEDGNPLQPSD 150
IVP+L G LKPYVSY+ ++ EFT+ DLF VY++KI +DF+A KL+ DG+ +PS
Sbjct: 86 IVPDLTGCKLKPYVSYKAPDVVQSEFTSLDLFNAVYSQKIIEDFKAGKLETDGSAKEPSV 145
Query: 151 NELLTPEEAEKRARKTGSDLF 171
NE LTPEEA +RARKTGSD+F
Sbjct: 146 NEQLTPEEALQRARKTGSDIF 166
>gi|170029947|ref|XP_001842852.1| 39S ribosomal protein L41, mitochondrial [Culex quinquefasciatus]
gi|167865312|gb|EDS28695.1| 39S ribosomal protein L41, mitochondrial [Culex quinquefasciatus]
Length = 159
Score = 125 bits (315), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 73/152 (48%), Positives = 96/152 (63%), Gaps = 7/152 (4%)
Query: 27 GYGSTGASYGKKNFRKFNWIN-RGTQQHREEQKLNPD--PRF-TPTYGVRKV-LQTSDGR 81
G + + GK NFRKF N RGT+ ++ + NPD P GVR + T+DGR
Sbjct: 8 GISMSTVAAGKHNFRKFLLYNKRGTRIFKKLRAANPDQYPDMPVDKRGVRDTGVTTADGR 67
Query: 82 --PVVETIPELIVPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINKDFEANKL 139
+ IPELIVPNLEG KPYVSYR ++ EFT++DL+ +YA+K+ DF++ L
Sbjct: 68 YVEIAAKIPELIVPNLEGCKFKPYVSYRAPDVIQSEFTSQDLYNAIYAQKVIDDFKSGAL 127
Query: 140 DEDGNPLQPSDNELLTPEEAEKRARKTGSDLF 171
+EDG+P PS E L+PEEA RARKTGSD+F
Sbjct: 128 EEDGSPKAPSAEETLSPEEAWTRARKTGSDIF 159
>gi|242247601|ref|NP_001156300.1| 39S ribosomal protein L41, mitochondrial [Acyrthosiphon pisum]
gi|239789766|dbj|BAH71485.1| ACYPI009551 [Acyrthosiphon pisum]
Length = 162
Score = 125 bits (314), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 77/151 (50%), Positives = 101/151 (66%), Gaps = 5/151 (3%)
Query: 27 GYGSTGASYGKKNFRKFNWINRGTQQHREEQKLNPDPRFTPT-YGVRKVLQTSDGRPVV- 84
+ + GK+NF+ F NRGT Q R++Q+ NP+ F T YGVR GR VV
Sbjct: 11 SFSTCPIRNGKRNFKNFILYNRGTNQFRKQQEENPNKDFQITDYGVRDTT-VRIGRKVVT 69
Query: 85 --ETIPELIVPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINKDFEANKLDED 142
E IP++IVP+L+ FNLKPYVSYR EI EFTA+DLF VY +KI DF+ NKL E+
Sbjct: 70 IKEKIPDIIVPDLDDFNLKPYVSYRVPEITQSEFTAQDLFNAVYRKKIVDDFKNNKLKEN 129
Query: 143 GNPLQPSDNELLTPEEAEKRARKTGSDLFDQ 173
P++PS+ E LTPE+A+ +AR+TGSD+F Q
Sbjct: 130 FEPIEPSEEESLTPEQAKLKARQTGSDMFSQ 160
>gi|21687222|ref|NP_611022.2| mitochondrial ribosomal protein L41 [Drosophila melanogaster]
gi|122063590|sp|Q7JZM8.1|RM41_DROME RecName: Full=39S ribosomal protein L41, mitochondrial;
Short=L41mt; Short=MRP-L41; Flags: Precursor
gi|17945451|gb|AAL48779.1| RE19416p [Drosophila melanogaster]
gi|21627144|gb|AAF58161.2| mitochondrial ribosomal protein L41 [Drosophila melanogaster]
gi|220948124|gb|ACL86605.1| mRpL41-PA [synthetic construct]
gi|220957370|gb|ACL91228.1| mRpL41-PA [synthetic construct]
Length = 166
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/141 (52%), Positives = 95/141 (67%), Gaps = 6/141 (4%)
Query: 36 GKKNFRKFNWIN-RGTQQHREEQK--LNPDPRFTPTYGVRKVLQTSDGR--PVVETIPEL 90
GK+NFRKFN N RGT+ +E QK NP P GVR DG+ + E IP++
Sbjct: 27 GKRNFRKFNAYNKRGTRVVKEAQKTLANP-PVAIHKRGVRDTGILVDGQYVEIPEKIPDI 85
Query: 91 IVPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINKDFEANKLDEDGNPLQPSD 150
IVP+L G LKPYVSY+ ++ EFT+ DLF VY++KI +DF+A KL +DG+ +PS
Sbjct: 86 IVPDLTGCKLKPYVSYKAPDVVQSEFTSLDLFNAVYSQKIIEDFKAGKLQKDGSAKEPSV 145
Query: 151 NELLTPEEAEKRARKTGSDLF 171
NE LTPEEA +RARKTGSD+F
Sbjct: 146 NEQLTPEEALQRARKTGSDIF 166
>gi|194882877|ref|XP_001975536.1| GG22368 [Drosophila erecta]
gi|190658723|gb|EDV55936.1| GG22368 [Drosophila erecta]
Length = 166
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/140 (51%), Positives = 93/140 (66%), Gaps = 4/140 (2%)
Query: 36 GKKNFRKFNWIN-RGTQQHREEQK-LNPDPRFTPTYGVRKVLQTSDGR--PVVETIPELI 91
GK+NFRKFN N RGT+ +E QK + P GVR DG+ + E IP++I
Sbjct: 27 GKRNFRKFNVYNKRGTRVVKEAQKTMAKPPVAIHKRGVRDTGILVDGQYVEIPEKIPDII 86
Query: 92 VPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINKDFEANKLDEDGNPLQPSDN 151
VP+L NLKPYVSY+ ++ EFT+ DLF VY++KI +DF+A KL DG+ +PS N
Sbjct: 87 VPDLTSCNLKPYVSYKAPDVVQSEFTSLDLFNAVYSQKIIEDFKAGKLQADGSAKEPSVN 146
Query: 152 ELLTPEEAEKRARKTGSDLF 171
E LTPEEA +RARKTGSD+F
Sbjct: 147 EQLTPEEALQRARKTGSDIF 166
>gi|110764683|ref|XP_001120690.1| PREDICTED: 39S ribosomal protein L41, mitochondrial [Apis
mellifera]
Length = 167
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/162 (46%), Positives = 98/162 (60%), Gaps = 19/162 (11%)
Query: 31 TGASYGKKNFRKFNWIN-RGTQQHREEQKLNP------DPRFTPTYGVRK--VLQTSDGR 81
+ YGK+NFR N RG++ +EE+ NP D R GVR + +
Sbjct: 15 SSTCYGKRNFRMIQLYNKRGSRMFKEERAKNPHYDIPIDKR-----GVRSTGMWMKNKWI 69
Query: 82 PVVETIPELIVPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINKDFEANKLDE 141
+ E IPEL+VP+L+ F+LKPYVSYR + EFTAKDLF VYA+KI KDF KLD
Sbjct: 70 NIPEMIPELVVPSLKDFHLKPYVSYRVTDFNKREFTAKDLFNIVYADKIKKDFIEGKLDP 129
Query: 142 DGNPLQPSDNELLTPEEAEKRARKTGSDLFDQEVDVGDRTQI 183
+G L PS+NE +TPEEA KRA TG+D+F + D+T+I
Sbjct: 130 NGESLNPSENEKMTPEEARKRAEMTGTDIF-----LMDKTEI 166
>gi|195429755|ref|XP_002062923.1| GK19706 [Drosophila willistoni]
gi|194159008|gb|EDW73909.1| GK19706 [Drosophila willistoni]
Length = 166
Score = 123 bits (308), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/150 (48%), Positives = 96/150 (64%), Gaps = 6/150 (4%)
Query: 27 GYGSTGASYGKKNFRKFN-WINRGTQQHREEQKLNPDPRFTPTY--GVRKVLQTSDGR-- 81
G ++ GK+NFRKFN + RGT+ +E Q+ +P P + GVR +G+
Sbjct: 18 GISTSLPLSGKRNFRKFNVYSKRGTRVVKEAQRTQQNPP-VPIHKRGVRDTGMIVNGQFV 76
Query: 82 PVVETIPELIVPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINKDFEANKLDE 141
+ E IPE+IVP+L G LKPYVSY+ ++ EFT+ DLF VY+ KI DF+A+KL
Sbjct: 77 EIQEKIPEIIVPDLTGCKLKPYVSYKAPDVVQSEFTSLDLFNAVYSRKIIDDFKADKLQS 136
Query: 142 DGNPLQPSDNELLTPEEAEKRARKTGSDLF 171
DG L+PS+NE L PEEA RARKTGSD+F
Sbjct: 137 DGQALEPSENERLQPEEALIRARKTGSDIF 166
>gi|195381953|ref|XP_002049697.1| GJ20612 [Drosophila virilis]
gi|194144494|gb|EDW60890.1| GJ20612 [Drosophila virilis]
Length = 166
Score = 123 bits (308), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/149 (48%), Positives = 96/149 (64%), Gaps = 4/149 (2%)
Query: 27 GYGSTGASYGKKNFRKFN-WINRGTQQHREEQK-LNPDPRFTPTYGVRKVLQTSDGR--P 82
+T GK+NFRKFN + RGT+ +E Q+ L P GVR T +G+
Sbjct: 18 AISTTAPMAGKRNFRKFNVYGKRGTRVVKEAQRTLANPPVAIHKRGVRDTGITVNGQFVE 77
Query: 83 VVETIPELIVPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINKDFEANKLDED 142
+ E IP++IVP+L G LKPYVSY+ E+ EFT+ DLF VY++KI +DF+A KL+ D
Sbjct: 78 IPEKIPDIIVPDLTGCKLKPYVSYKAPEVIQSEFTSLDLFNAVYSQKIIEDFKAGKLEAD 137
Query: 143 GNPLQPSDNELLTPEEAEKRARKTGSDLF 171
G+ +PS NE LTPE A +RARKTGSD+F
Sbjct: 138 GSATEPSPNEQLTPELALQRARKTGSDIF 166
>gi|195486214|ref|XP_002091410.1| GE12256 [Drosophila yakuba]
gi|194177511|gb|EDW91122.1| GE12256 [Drosophila yakuba]
Length = 166
Score = 122 bits (307), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 73/141 (51%), Positives = 94/141 (66%), Gaps = 6/141 (4%)
Query: 36 GKKNFRKFNWIN-RGTQQHREEQK--LNPDPRFTPTYGVRKVLQTSDGR--PVVETIPEL 90
GK+NFRKFN N RGT+ +E QK NP P GVR+ DG+ + E IP++
Sbjct: 27 GKRNFRKFNVYNKRGTRVVKEAQKTLANP-PVAIHKRGVRETGILVDGQYVEIPEKIPDI 85
Query: 91 IVPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINKDFEANKLDEDGNPLQPSD 150
IVP+L LKPYVSY+ ++ EFT+ DLF VY++KI +DF+A KL DG+ +PS
Sbjct: 86 IVPDLTNCKLKPYVSYKAPDVVQSEFTSLDLFNAVYSQKIIEDFKAGKLQADGSAKEPSV 145
Query: 151 NELLTPEEAEKRARKTGSDLF 171
NE LTPEEA +RARKTGSD+F
Sbjct: 146 NEQLTPEEALQRARKTGSDIF 166
>gi|195334567|ref|XP_002033949.1| GM20152 [Drosophila sechellia]
gi|194125919|gb|EDW47962.1| GM20152 [Drosophila sechellia]
Length = 166
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/141 (51%), Positives = 93/141 (65%), Gaps = 6/141 (4%)
Query: 36 GKKNFRKFNWIN-RGTQQHREEQK--LNPDPRFTPTYGVRKVLQTSDGR--PVVETIPEL 90
GK+NFRKFN N RGT+ +E QK NP P GVR DG+ + E IP++
Sbjct: 27 GKRNFRKFNAYNKRGTRVVKEAQKTLANP-PVAIHKRGVRDTGILVDGQYVEIPEKIPDI 85
Query: 91 IVPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINKDFEANKLDEDGNPLQPSD 150
IVP+L G LKPYVSY+ ++ EFT+ DLF VY++KI +DF+A KL DG+ +PS
Sbjct: 86 IVPDLTGCKLKPYVSYKAPDVVQSEFTSLDLFNAVYSQKIIEDFKAGKLQTDGSAKEPSV 145
Query: 151 NELLTPEEAEKRARKTGSDLF 171
NE LT EEA +RARKTGSD+F
Sbjct: 146 NEQLTSEEALQRARKTGSDIF 166
>gi|87248363|gb|ABD36234.1| ribosomal protein L41 [Bombyx mori]
Length = 162
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/150 (46%), Positives = 95/150 (63%), Gaps = 5/150 (3%)
Query: 26 SGYGSTGASYGKKNFRKFNWINR-GTQQHREEQKLNPDPRF-TPTYGVRKVLQTSDGRPV 83
S T S GK NF KF N+ G+ H+++Q + D F GV + +GR V
Sbjct: 14 SNISVTATSEGKSNFSKFVMPNKSGSVLHKKKQ-MTEDSEFEIDKRGVSDIGYNLNGRLV 72
Query: 84 V--ETIPELIVPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINKDFEANKLDE 141
+ E IPE+IVPNL+ F+LKPYVSY+ ++ EFT LF VY++KI DF+ KLDE
Sbjct: 73 MVPEMIPEIIVPNLKDFDLKPYVSYKAADVIQSEFTPSQLFDAVYSKKIVTDFKQGKLDE 132
Query: 142 DGNPLQPSDNELLTPEEAEKRARKTGSDLF 171
+GNP++PS+ E L PEEA RA++TGSD+F
Sbjct: 133 EGNPMEPSEEESLKPEEAIIRAKQTGSDMF 162
>gi|383858213|ref|XP_003704596.1| PREDICTED: 39S ribosomal protein L41, mitochondrial-like [Megachile
rotundata]
Length = 165
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/158 (44%), Positives = 99/158 (62%), Gaps = 5/158 (3%)
Query: 21 ALVSGSGYGSTGASYGKKNFRKFNWIN-RGTQQHREEQKLNPDPRF-TPTYGVRKVLQTS 78
++ ++ ++GK+NFR N RGT+ +++Q NP+ G R +
Sbjct: 5 CMIISRQISTSSIAHGKRNFRMIQIYNKRGTRAFKKDQATNPNCDIPIDRRGTRLTGRYV 64
Query: 79 DGRPV--VETIPELIVPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINKDFEA 136
DG+ V E IPELIVP+L+ F+LKPYVSY+ E++ E+TAKDLF VYA+KI +DF+
Sbjct: 65 DGKFVNIPEMIPELIVPSLKDFDLKPYVSYKA-EVKQREYTAKDLFNFVYAKKIKEDFKN 123
Query: 137 NKLDEDGNPLQPSDNELLTPEEAEKRARKTGSDLFDQE 174
+LD G PL PS+ E LTPEEA RA KTG+D+F E
Sbjct: 124 GQLDSKGEPLNPSEYEKLTPEEARIRAEKTGTDIFTPE 161
>gi|332374964|gb|AEE62623.1| unknown [Dendroctonus ponderosae]
Length = 163
Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/158 (47%), Positives = 98/158 (62%), Gaps = 10/158 (6%)
Query: 21 ALVSGSGYGSTGASYGKKNFRKFNWIN-RGTQQHREEQKLNPDPRFTPTY---GVRKVL- 75
L+ G +T +GK+NFRKF N RGT+ ++++ DP + + G+R V
Sbjct: 5 GLLIKRGISTTCVRHGKRNFRKFPVYNKRGTKIFKQQRM---DPNYDLPHDKRGLRDVGY 61
Query: 76 --QTSDGRPVVETIPELIVPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINKD 133
Q S V E +PEL+VP+L F LKPYVSYRT ++ EFTA+DLF VYA KI KD
Sbjct: 62 YDQNSKLVLVPEMVPELVVPDLTDFPLKPYVSYRTADVVQTEFTAEDLFNVVYAPKIMKD 121
Query: 134 FEANKLDEDGNPLQPSDNELLTPEEAEKRARKTGSDLF 171
F+ L EDG+P+ PS E LTPEEA+ A KTG+DLF
Sbjct: 122 FKEGNLTEDGSPVNPSPEENLTPEEAKNNADKTGTDLF 159
>gi|350421063|ref|XP_003492719.1| PREDICTED: 39S ribosomal protein L41, mitochondrial-like [Bombus
impatiens]
Length = 169
Score = 120 bits (300), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 67/159 (42%), Positives = 99/159 (62%), Gaps = 4/159 (2%)
Query: 22 LVSGSGYGSTGASYGKKNFRKFNWIN-RGTQQHREEQKLNPDPRF-TPTYGVRKVLQTSD 79
+V ++ + +GK+NFR N RG++ ++E + +P+ GV+ + +
Sbjct: 6 MVVTRQISTSASCHGKRNFRMIQIFNKRGSRAYKEARAKDPNCDIPIDRRGVKITGKWVN 65
Query: 80 GRPV--VETIPELIVPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINKDFEAN 137
V E IPELIVP+LE F+LKPYVSY+ ++ E+TAKDLF VYA+KI KDF+
Sbjct: 66 NHWVNIPEMIPELIVPSLENFHLKPYVSYKVTNVKKREYTAKDLFNLVYADKIKKDFKEG 125
Query: 138 KLDEDGNPLQPSDNELLTPEEAEKRARKTGSDLFDQEVD 176
+L+ DG PL P++ E LTPEEA RA TG+D+F +V+
Sbjct: 126 QLNPDGEPLNPNEYEALTPEEARIRAEMTGTDIFQMDVE 164
>gi|340719776|ref|XP_003398323.1| PREDICTED: 39S ribosomal protein L41, mitochondrial-like [Bombus
terrestris]
Length = 169
Score = 119 bits (299), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 96/161 (59%), Gaps = 8/161 (4%)
Query: 22 LVSGSGYGSTGASYGKKNFRKFNWIN-RGTQQHREEQKLNPDPRFTPTYGVRKVLQT--- 77
++ ++ + GK+NFR N RG++ ++E + DP + R V T
Sbjct: 6 MIVTRQISTSASCCGKRNFRMIQLFNKRGSRAYKEARA--KDPNYDIPIDRRGVKITGKW 63
Query: 78 --SDGRPVVETIPELIVPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINKDFE 135
+ + E IPELIVP+L+ FNLKPYVSYR +I+ E+TAKDLF VYA+KI KDF
Sbjct: 64 VNNHWVNIPEMIPELIVPSLKNFNLKPYVSYRVKDIKKREYTAKDLFNLVYADKIKKDFR 123
Query: 136 ANKLDEDGNPLQPSDNELLTPEEAEKRARKTGSDLFDQEVD 176
+L+ DG PL PS+ E LT EEA RA TG+D+F +V+
Sbjct: 124 EGQLNPDGEPLNPSEYEALTAEEARIRAEMTGTDIFQMDVE 164
>gi|321479048|gb|EFX90004.1| hypothetical protein DAPPUDRAFT_205195 [Daphnia pulex]
Length = 168
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/149 (45%), Positives = 92/149 (61%), Gaps = 6/149 (4%)
Query: 27 GYGSTGASYGKKNFRKFNWIN-RGTQQHREEQKLNPDPRF-TPTYGVRKVLQTSDGRPVV 84
G ++ + GK+NF+KF N RGT+ + +Q NP P TYGVR + +G V
Sbjct: 20 GISTSACACGKRNFKKFPIYNKRGTRDFKAKQAKNPHPDVPIHTYGVRPI-GYRNGSAFV 78
Query: 85 ET---IPELIVPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINKDFEANKLDE 141
E IPE+IVP+L GF LKPYVSYRT++I P T ++LF VY +KI +DF+A KL
Sbjct: 79 EIKELIPEIIVPDLTGFKLKPYVSYRTSDIVQPPLTPEELFGAVYVKKITEDFKAGKLGP 138
Query: 142 DGNPLQPSDNELLTPEEAEKRARKTGSDL 170
D L+PS E LTPEEA+++ SD+
Sbjct: 139 DNQSLEPSAAERLTPEEAKEKVSSIRSDI 167
>gi|380020785|ref|XP_003694259.1| PREDICTED: 39S ribosomal protein L41, mitochondrial-like [Apis
florea]
Length = 167
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/148 (46%), Positives = 88/148 (59%), Gaps = 10/148 (6%)
Query: 31 TGASYGKKNFRKFNWIN-RGTQQHREEQKLNP------DPRFTPTYGVRKVLQTSDGRPV 83
+ GK+NFR N RG++ +EE+ NP D R G+ + V
Sbjct: 15 SSTCCGKRNFRMIQLYNKRGSRMFKEERAKNPHYDIPIDRRGVKLTGM---WVKNKWVNV 71
Query: 84 VETIPELIVPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINKDFEANKLDEDG 143
E IPELIVP+L+ F+LKPYVSYR + EFTAKDLF VYA+KI KDF KLD +G
Sbjct: 72 PEMIPELIVPSLKDFHLKPYVSYRVTDFTKREFTAKDLFNIVYADKIRKDFIQGKLDSNG 131
Query: 144 NPLQPSDNELLTPEEAEKRARKTGSDLF 171
L PS+NE +TPEEA + A TG+D+F
Sbjct: 132 ESLNPSENEKMTPEEAREHAEMTGTDIF 159
>gi|194753233|ref|XP_001958921.1| GF12623 [Drosophila ananassae]
gi|190620219|gb|EDV35743.1| GF12623 [Drosophila ananassae]
Length = 166
Score = 116 bits (290), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/148 (47%), Positives = 93/148 (62%), Gaps = 6/148 (4%)
Query: 29 GSTGASYGKKNFRKFNWIN-RGTQQHREEQKLNPDPRFTPTY--GVRKVLQTSDGR--PV 83
+T GK+NFRKF N RGT+ +E Q+ +P P + GVR DG +
Sbjct: 20 STTAVLEGKRNFRKFVVYNKRGTRVVKEAQRTMANPP-VPIHKRGVRDTGIKIDGEYIEI 78
Query: 84 VETIPELIVPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINKDFEANKLDEDG 143
E IPELIVP+L G LKPYVSY+ ++ EFT+ DLF +Y++KI +DF+A L DG
Sbjct: 79 PEKIPELIVPDLTGCKLKPYVSYKAPDVVQSEFTSLDLFNAIYSKKIIEDFKAGTLQADG 138
Query: 144 NPLQPSDNELLTPEEAEKRARKTGSDLF 171
+ +PS NE LT EEA +RARKTG+D+F
Sbjct: 139 SAKEPSPNEQLTSEEAYQRARKTGTDIF 166
>gi|357604596|gb|EHJ64250.1| ribosomal protein L41 [Danaus plexippus]
Length = 162
Score = 115 bits (289), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 64/139 (46%), Positives = 91/139 (65%), Gaps = 3/139 (2%)
Query: 36 GKKNFRKFNWINRGTQQHREEQKLNPDPRF-TPTYGVRKVLQTSDGR--PVVETIPELIV 92
GK+NFRKF N+ + ++++ P+P GVR + +GR V E IPELIV
Sbjct: 24 GKRNFRKFVVANKRGSRFFKDRQSGPNPELEVDKRGVRDIGYMLNGRFVKVPEMIPELIV 83
Query: 93 PNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINKDFEANKLDEDGNPLQPSDNE 152
P+L+ NLKPYVSY+ ++ EFT + LF VY++KI D++ KL+ DG PL+PS+ E
Sbjct: 84 PDLKDCNLKPYVSYKAEDVIQSEFTPQQLFDAVYSKKIVIDYKQGKLNADGQPLEPSEEE 143
Query: 153 LLTPEEAEKRARKTGSDLF 171
L PEEA +RA++TGSD+F
Sbjct: 144 NLQPEEAVQRAKRTGSDIF 162
>gi|195150553|ref|XP_002016215.1| GL11472 [Drosophila persimilis]
gi|194110062|gb|EDW32105.1| GL11472 [Drosophila persimilis]
Length = 166
Score = 112 bits (280), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 67/140 (47%), Positives = 87/140 (62%), Gaps = 4/140 (2%)
Query: 36 GKKNFRKFN-WINRGTQQHREEQKLNPDPRF-TPTYGVRKVLQTSDGR--PVVETIPELI 91
GK+NFRKFN RGT+ +E QK +P GVR DG+ + E IP++I
Sbjct: 27 GKRNFRKFNVHSKRGTRVVKEAQKTMANPPVPIDKRGVRDTGILVDGKFVEIPEKIPDII 86
Query: 92 VPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINKDFEANKLDEDGNPLQPSDN 151
VP+L LKPYVSY+ E+ EFT+ DLF VY++KI +DF+A L DG+P +PS
Sbjct: 87 VPDLTDCKLKPYVSYKAPEVVQSEFTSLDLFNAVYSKKIVEDFKAGSLQADGSPKEPSAE 146
Query: 152 ELLTPEEAEKRARKTGSDLF 171
E LT EA RAR+TGSD+F
Sbjct: 147 EQLTSSEAFLRARRTGSDIF 166
>gi|125808115|ref|XP_001360637.1| GA11937 [Drosophila pseudoobscura pseudoobscura]
gi|121988765|sp|Q291A0.1|RM41_DROPS RecName: Full=39S ribosomal protein L41, mitochondrial;
Short=L41mt; Short=MRP-L41; Flags: Precursor
gi|54635809|gb|EAL25212.1| GA11937 [Drosophila pseudoobscura pseudoobscura]
Length = 166
Score = 112 bits (279), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 67/140 (47%), Positives = 87/140 (62%), Gaps = 4/140 (2%)
Query: 36 GKKNFRKFN-WINRGTQQHREEQKLNPDPRF-TPTYGVRKVLQTSDGR--PVVETIPELI 91
GK+NFRKFN RGT+ +E QK +P GVR DG+ + E IP++I
Sbjct: 27 GKRNFRKFNVHSKRGTRVVKEAQKTMANPPVPIDKRGVRDTGILVDGKFVEIPEKIPDII 86
Query: 92 VPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINKDFEANKLDEDGNPLQPSDN 151
VP+L LKPYVSY+ E+ EFT+ DLF VY++KI +DF+A L DG+P +PS
Sbjct: 87 VPDLTDCKLKPYVSYKAPEVVQSEFTSLDLFNAVYSKKIVEDFKAGSLQADGSPKEPSAE 146
Query: 152 ELLTPEEAEKRARKTGSDLF 171
E LT EA RAR+TGSD+F
Sbjct: 147 EKLTSSEAFLRARRTGSDIF 166
>gi|346469067|gb|AEO34378.1| hypothetical protein [Amblyomma maculatum]
Length = 179
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/145 (42%), Positives = 80/145 (55%), Gaps = 10/145 (6%)
Query: 31 TGASYGKKNFRKFNWIN-RGTQQHREEQKLNPDPRFTPTYGVRKVLQTSDGRPVVETIPE 89
T GK+NFRKF N RGT R + R TYGVR+ + P+ E +PE
Sbjct: 36 TAQCLGKRNFRKFPVHNIRGTFHDRRRKD-----RVIETYGVRQPFVSVRSGPIPEMVPE 90
Query: 90 LIVPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINKDFEANKLDEDGNPLQPS 149
LIVP+L L+PYVSY E+ FTA+DLF VY+E++ KDF+ K D+ L+
Sbjct: 91 LIVPDLTDCQLRPYVSYCAAEVCQGPFTARDLFDAVYSEQVAKDFKEGKADQSVRHLEAQ 150
Query: 150 DNELLTPEEAEKRARKTGSDLFDQE 174
PEEA RAR+ GSD+F E
Sbjct: 151 P----CPEEARMRARQVGSDIFPPE 171
>gi|442759313|gb|JAA71815.1| Putative 39s ribosomal protein l41 [Ixodes ricinus]
gi|442759315|gb|JAA71816.1| Putative 39s ribosomal protein l41 [Ixodes ricinus]
Length = 170
Score = 102 bits (254), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 90/154 (58%), Gaps = 10/154 (6%)
Query: 21 ALVSGSGYGSTGASYGKKNFRKFNWIN-RGTQQHREEQKLNPDPRFTPTYGVRK--VLQT 77
+ V + ++ +GK+NFRKF N RG R + R TYG R+ V +
Sbjct: 12 SFVQCRSFTTSEVRHGKRNFRKFLMPNVRGNFHDRARKD-----RVIETYGYREPGVERG 66
Query: 78 SDGRPVVETIPELIVPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINKDFEAN 137
+ + V E P+L+VP+LEGF LKPYVSYR E+ EFTA+DLF Y+E++ KDF A
Sbjct: 67 NSLQMVPEMEPQLVVPDLEGFQLKPYVSYRAAEVCQGEFTARDLFDAQYSEQVAKDFNAG 126
Query: 138 KLDEDGNPLQPSDNELLTPEEAEKRARKTGSDLF 171
D + + S E L+ EEA +RAR+TGSD+F
Sbjct: 127 YRDLEHHTRTVS--ERLSKEEALQRARQTGSDIF 158
>gi|427782111|gb|JAA56507.1| Putative 39s ribosomal protein l41 mitochondrial [Rhipicephalus
pulchellus]
Length = 168
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 83/146 (56%), Gaps = 14/146 (9%)
Query: 29 GSTGASYGKKNFRKFNWIN-RGTQQHREEQKLNPDPRFTPTYGVRKVLQTSDGRPVVETI 87
+T GK+NFRKF N RGT R + R TYGVR+ + G P+ E +
Sbjct: 21 STTAPCLGKRNFRKFPVHNIRGTFDDRRRKD-----RVIETYGVREPSMSYRGPPIPEMV 75
Query: 88 PELIVPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINKDFEANKLDEDGNPL- 146
PEL+VP+L L+PYVSYR E+ FTA+DLF VY++ + KDF+ + D+ L
Sbjct: 76 PELVVPDLTDCKLRPYVSYRAPEVTQGPFTARDLFDAVYSDAVAKDFQEGQADKSIRHLD 135
Query: 147 -QPSDNELLTPEEAEKRARKTGSDLF 171
QPS +EA RAR+TGSD+F
Sbjct: 136 AQPS------ADEARLRARQTGSDIF 155
>gi|427782113|gb|JAA56508.1| Putative 39s ribosomal protein l41 mitochondrial [Rhipicephalus
pulchellus]
Length = 168
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 83/146 (56%), Gaps = 14/146 (9%)
Query: 29 GSTGASYGKKNFRKFNWIN-RGTQQHREEQKLNPDPRFTPTYGVRKVLQTSDGRPVVETI 87
+T GK+NFRKF N RGT R + R TYGVR+ + G P+ E +
Sbjct: 21 STTAPCLGKRNFRKFPVHNIRGTFDDRRRKD-----RVIETYGVREPSMSYRGPPIPEMV 75
Query: 88 PELIVPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINKDFEANKLDEDGNPL- 146
PEL+VP+L L+PYVSYR E+ FTA+DLF VY++ + KDF+ + D+ L
Sbjct: 76 PELVVPDLTDCKLRPYVSYRAPEVTQGPFTARDLFDAVYSDAVAKDFQEGQADKSIRHLD 135
Query: 147 -QPSDNELLTPEEAEKRARKTGSDLF 171
QPS +EA RAR+TGSD+F
Sbjct: 136 AQPS------ADEARLRARQTGSDIF 155
>gi|225712034|gb|ACO11863.1| 39S ribosomal protein L41, mitochondrial precursor [Lepeophtheirus
salmonis]
Length = 188
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 65/108 (60%), Gaps = 2/108 (1%)
Query: 66 TPTYGVRK--VLQTSDGRPVVETIPELIVPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFI 123
T YG R + + E PEL+VP+L F LKPYVSYR + E T KDLF
Sbjct: 64 TTNYGCRSTGIRHEIGWEYIPEMRPELVVPDLTDFKLKPYVSYRAKNVVQEELTPKDLFN 123
Query: 124 EVYAEKINKDFEANKLDEDGNPLQPSDNELLTPEEAEKRARKTGSDLF 171
VY KI DF+++KL+EDG+ L+PS E +T EA A+KTGSD++
Sbjct: 124 AVYGSKIVNDFKSDKLNEDGSSLEPSSYEKMTIHEAYVAAKKTGSDIY 171
>gi|241798331|ref|XP_002400742.1| 39S ribosomal protein L41, putative [Ixodes scapularis]
gi|215510831|gb|EEC20284.1| 39S ribosomal protein L41, putative [Ixodes scapularis]
Length = 133
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/89 (52%), Positives = 61/89 (68%), Gaps = 2/89 (2%)
Query: 83 VVETIPELIVPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINKDFEANKLDED 142
V E PEL+VP+LEGF LKPYVSYR E+ EFTA+DLF Y+E++ KDF+ D +
Sbjct: 35 VPEMEPELVVPDLEGFQLKPYVSYRAAEVCQGEFTARDLFDAQYSEQVAKDFKEGFRDLE 94
Query: 143 GNPLQPSDNELLTPEEAEKRARKTGSDLF 171
+ S E L+ EEA +RAR+TGSD+F
Sbjct: 95 HHTRTVS--ERLSKEEALQRARQTGSDIF 121
>gi|47206029|emb|CAF90467.1| unnamed protein product [Tetraodon nigroviridis]
Length = 135
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 36/60 (60%)
Query: 83 VVETIPELIVPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINKDFEANKLDED 142
V IPEL+VPNLEGF LKPYVSYR P TA+ LF +V A I KDF+ D
Sbjct: 51 VRAMIPELMVPNLEGFKLKPYVSYRCQRGSAPAVTAQSLFSDVVAPHITKDFKEGTFSRD 110
>gi|209731412|gb|ACI66575.1| 39S ribosomal protein L41, mitochondrial precursor [Salmo salar]
gi|209733062|gb|ACI67400.1| 39S ribosomal protein L41, mitochondrial precursor [Salmo salar]
gi|209736502|gb|ACI69120.1| 39S ribosomal protein L41, mitochondrial precursor [Salmo salar]
gi|209737134|gb|ACI69436.1| 39S ribosomal protein L41, mitochondrial precursor [Salmo salar]
Length = 135
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 51/96 (53%), Gaps = 9/96 (9%)
Query: 47 NRGTQQHREEQKLNPDPRFTPTYGVRKVLQTSDGRPVVETIPELIVPNLEGFNLKPYVSY 106
RG++ H + + P T + RK + PV IP+ +VPNLEGF LKPYVSY
Sbjct: 24 KRGSRTHYKGRGAQPTGVLTSS---RKFV------PVQAMIPQFVVPNLEGFKLKPYVSY 74
Query: 107 RTNEIQTPEFTAKDLFIEVYAEKINKDFEANKLDED 142
RT P T + LF E A +I KDFE D++
Sbjct: 75 RTPAGTEPAVTPEGLFSETVAPQIQKDFEEGSFDKE 110
>gi|209731172|gb|ACI66455.1| 39S ribosomal protein L41, mitochondrial precursor [Salmo salar]
Length = 135
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 51/96 (53%), Gaps = 9/96 (9%)
Query: 47 NRGTQQHREEQKLNPDPRFTPTYGVRKVLQTSDGRPVVETIPELIVPNLEGFNLKPYVSY 106
RG++ H + + P T + RK + PV IP+ +VPNLEGF LKPYVSY
Sbjct: 24 KRGSRTHYKGRGAQPTGVLTSS---RKFV------PVQAMIPQFVVPNLEGFKLKPYVSY 74
Query: 107 RTNEIQTPEFTAKDLFIEVYAEKINKDFEANKLDED 142
RT P T + LF E A +I KDFE D++
Sbjct: 75 RTPAGTEPAVTPEGLFSETVAPQIQKDFEEGSFDKE 110
>gi|209738322|gb|ACI70030.1| 39S ribosomal protein L41, mitochondrial precursor [Salmo salar]
gi|303658152|gb|ADM15913.1| 39S ribosomal protein L41, mitochondrial precursor [Salmo salar]
Length = 135
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 52/96 (54%), Gaps = 9/96 (9%)
Query: 47 NRGTQQHREEQKLNPDPRFTPTYGVRKVLQTSDGRPVVETIPELIVPNLEGFNLKPYVSY 106
RG++ H + + P T + RK + PV IP+ +VP+LEGF LKPYVSY
Sbjct: 24 KRGSRTHYKGRGAQPTGVLTSS---RKFV------PVQAMIPQFVVPDLEGFRLKPYVSY 74
Query: 107 RTNEIQTPEFTAKDLFIEVYAEKINKDFEANKLDED 142
RT P T + LF E A++I KDFE D++
Sbjct: 75 RTPAGTEPAVTPEGLFSEAVAQQIQKDFEEGSFDKE 110
>gi|443723094|gb|ELU11675.1| hypothetical protein CAPTEDRAFT_226355 [Capitella teleta]
Length = 177
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 40/56 (71%)
Query: 85 ETIPELIVPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINKDFEANKLD 140
+ +P+ +VP+L F LKPYVSY EI EFTAK+LF E YA+K+ +DF+ K+D
Sbjct: 103 DMVPDFVVPDLTNFKLKPYVSYNVEEINQSEFTAKNLFDECYAKKLVEDFQEGKID 158
>gi|209733810|gb|ACI67774.1| 39S ribosomal protein L41, mitochondrial precursor [Salmo salar]
Length = 135
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 51/96 (53%), Gaps = 9/96 (9%)
Query: 47 NRGTQQHREEQKLNPDPRFTPTYGVRKVLQTSDGRPVVETIPELIVPNLEGFNLKPYVSY 106
RG++ H + + P T + RK + PV IP+ +VP+LEGF LKPYVSY
Sbjct: 24 KRGSRTHYKGRGAQPTGVLTSS---RKFV------PVQAMIPQFVVPDLEGFRLKPYVSY 74
Query: 107 RTNEIQTPEFTAKDLFIEVYAEKINKDFEANKLDED 142
RT P + LF E A++I KDFE D++
Sbjct: 75 RTPAGTEPAVIPEGLFSEAVAQQIQKDFEEGSFDKE 110
>gi|449270011|gb|EMC80738.1| 39S ribosomal protein L41, mitochondrial, partial [Columba livia]
Length = 108
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 47/82 (57%), Gaps = 8/82 (9%)
Query: 70 GVRKVLQTSDGRPVV---ETIPELIVPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVY 126
G +K+ + GR + E +P+ IVPNLEGF LKPYVSYR E TAK LF EV
Sbjct: 8 GAKKLGVLTAGRKFILLREMVPQFIVPNLEGFKLKPYVSYRAPEGSEAPMTAKQLFSEVV 67
Query: 127 AEKINKD-----FEANKLDEDG 143
A +I KD FE L++ G
Sbjct: 68 APRIEKDVKDGTFEPGNLEKYG 89
>gi|150247124|ref|NP_001092835.1| 39S ribosomal protein L41, mitochondrial [Bos taurus]
gi|148744815|gb|AAI41990.1| MRPL41 protein [Bos taurus]
gi|296481996|tpg|DAA24111.1| TPA: mitochondrial ribosomal protein L41 [Bos taurus]
Length = 135
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 38/60 (63%)
Query: 83 VVETIPELIVPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINKDFEANKLDED 142
V E +PEL+VP+L GF LKPYV+YR E TAK LF+E A I KDF+A D +
Sbjct: 51 VKEMVPELVVPDLAGFKLKPYVNYRAPEGTDVPLTAKQLFLETAAPAIEKDFKAGTFDPE 110
>gi|440894514|gb|ELR46945.1| 39S ribosomal protein L41, mitochondrial, partial [Bos grunniens
mutus]
Length = 127
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 38/60 (63%)
Query: 83 VVETIPELIVPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINKDFEANKLDED 142
V E +PEL+VP+L GF LKPYV+YR E TAK LF+E A I KDF+A D +
Sbjct: 43 VKEMVPELVVPDLAGFKLKPYVNYRAPEGTDVPLTAKQLFLETAAPAIEKDFKAGTFDPE 102
>gi|432875439|ref|XP_004072842.1| PREDICTED: 39S ribosomal protein L41, mitochondrial-like isoform 1
[Oryzias latipes]
gi|432875441|ref|XP_004072843.1| PREDICTED: 39S ribosomal protein L41, mitochondrial-like isoform 2
[Oryzias latipes]
gi|432875443|ref|XP_004072844.1| PREDICTED: 39S ribosomal protein L41, mitochondrial-like isoform 3
[Oryzias latipes]
Length = 135
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Query: 75 LQTSDGR--PVVETIPELIVPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINK 132
L+ S G+ V IPE +VP+LEGF L+PYVSYR++E P TA+ LF + A +I K
Sbjct: 41 LRLSSGKFVAVRAMIPEFVVPSLEGFKLRPYVSYRSSEGTEPPVTAQSLFDDAVAPQIRK 100
Query: 133 DFEANKLDED 142
DFE + +
Sbjct: 101 DFEEGSFNPE 110
>gi|410922094|ref|XP_003974518.1| PREDICTED: 39S ribosomal protein L41, mitochondrial-like [Takifugu
rubripes]
Length = 135
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 36/60 (60%)
Query: 83 VVETIPELIVPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINKDFEANKLDED 142
V IPEL+VPNLEGF L+PYVSYR TA+ LF +V A I KDF+ + D
Sbjct: 51 VRAMIPELLVPNLEGFKLRPYVSYRCQRGSATPVTAQSLFSDVVAPHITKDFKEGTFNRD 110
>gi|348543157|ref|XP_003459050.1| PREDICTED: 39S ribosomal protein L41, mitochondrial-like
[Oreochromis niloticus]
Length = 135
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 49/96 (51%), Gaps = 9/96 (9%)
Query: 47 NRGTQQHREEQKLNPDPRFTPTYGVRKVLQTSDGRPVVETIPELIVPNLEGFNLKPYVSY 106
RG++ H + + P R P+ S + IPE +VP LEGF L+PYVSY
Sbjct: 24 KRGSRTHNKGRGARPAGRNLPS---------SKFLAIRSMIPEFVVPPLEGFKLRPYVSY 74
Query: 107 RTNEIQTPEFTAKDLFIEVYAEKINKDFEANKLDED 142
R + P T + LF EV A +I +DFEA +D
Sbjct: 75 RAPKGTEPPLTVQSLFDEVVAPQIKQDFEAGIFSKD 110
>gi|426222880|ref|XP_004005608.1| PREDICTED: 39S ribosomal protein L41, mitochondrial [Ovis aries]
Length = 135
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 36/60 (60%)
Query: 83 VVETIPELIVPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINKDFEANKLDED 142
V E +PEL+VP L GF LKPYV+YR E TAK LF+E A I KDF A D +
Sbjct: 51 VKEMVPELVVPELAGFKLKPYVNYRAPEGTDVPLTAKQLFLETAAPAIEKDFRAGTFDPE 110
>gi|426241253|ref|XP_004014506.1| PREDICTED: 39S ribosomal protein L41, mitochondrial-like [Ovis
aries]
Length = 135
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 36/60 (60%)
Query: 83 VVETIPELIVPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINKDFEANKLDED 142
V E +PEL+VP L GF LKPYV+YR E TAK LF+E A I KDF A D +
Sbjct: 51 VKEMVPELVVPELAGFKLKPYVNYRAPEGTDVPLTAKQLFLETAAPAIEKDFRAGTFDPE 110
>gi|50757492|ref|XP_415536.1| PREDICTED: 39S ribosomal protein L41-A, mitochondrial [Gallus
gallus]
Length = 135
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 41/66 (62%), Gaps = 5/66 (7%)
Query: 83 VVETIPELIVPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINKD-----FEAN 137
+ E +P+ +VP+L GF LKPYVSYR E P TAK LF E+ A +I KD F+ N
Sbjct: 51 IKEMVPQFVVPDLAGFKLKPYVSYRAPEGSEPPMTAKQLFTELVAPRIEKDVKEGTFDPN 110
Query: 138 KLDEDG 143
L++ G
Sbjct: 111 ALEKYG 116
>gi|291413693|ref|XP_002723099.1| PREDICTED: mitochondrial ribosomal protein L41-like [Oryctolagus
cuniculus]
Length = 135
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 75 LQTSDGR--PVVETIPELIVPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINK 132
++ S GR PV E PE +VP+L GF LKPYVSYR TAK LF++ A I K
Sbjct: 41 VRASGGRFVPVKEMAPEFVVPDLAGFKLKPYVSYRAPAGADEPLTAKALFLDTAAPAIEK 100
Query: 133 DFEANKLDED 142
DF D +
Sbjct: 101 DFREGAFDPE 110
>gi|225715476|gb|ACO13584.1| 39S ribosomal protein L41, mitochondrial precursor [Esox lucius]
Length = 135
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 36/61 (59%)
Query: 82 PVVETIPELIVPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINKDFEANKLDE 141
PV IP+ +VPNLEGF LKPYVSYR+ P T + LF E A +I KD E D
Sbjct: 50 PVQAMIPQFVVPNLEGFKLKPYVSYRSPVGTEPPVTPEGLFSEAVAPQIQKDLEEGSFDM 109
Query: 142 D 142
+
Sbjct: 110 E 110
>gi|332261613|ref|XP_003279863.1| PREDICTED: 39S ribosomal protein L41, mitochondrial isoform 1
[Nomascus leucogenys]
gi|441623463|ref|XP_004088912.1| PREDICTED: 39S ribosomal protein L41, mitochondrial isoform 2
[Nomascus leucogenys]
Length = 137
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 35/60 (58%)
Query: 83 VVETIPELIVPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINKDFEANKLDED 142
+ E +PE +VP+L GF LKPYVSYR E + TA LF E A I KDF+ D D
Sbjct: 53 IKEMVPEFVVPDLTGFKLKPYVSYRAPESEETPLTAAQLFSEAVAPAIEKDFKDGTFDPD 112
>gi|417396071|gb|JAA45069.1| Putative 39s ribosomal protein l41 mitochondrial [Desmodus
rotundus]
Length = 135
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Query: 75 LQTSDGRPVV--ETIPELIVPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINK 132
++T +G+ V+ E +PEL+VP+L GF LKPYVSYR TA LF EV A + +
Sbjct: 41 VRTREGKFVLVKEMVPELVVPDLAGFKLKPYVSYRAPAGDDTPLTAARLFQEVVAPAVER 100
Query: 133 DFEANKLD 140
DF A D
Sbjct: 101 DFRAGTFD 108
>gi|224073027|ref|XP_002195063.1| PREDICTED: 39S ribosomal protein L41, mitochondrial [Taeniopygia
guttata]
Length = 135
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 37/60 (61%)
Query: 83 VVETIPELIVPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINKDFEANKLDED 142
V E +PE +VP+L GF L+PYVSYR E P TAK LF ++ A +I KD + D D
Sbjct: 51 VKEMVPEFVVPDLTGFKLRPYVSYRAPEGSEPPVTAKQLFDQLVAPRIEKDVKDGTFDPD 110
>gi|348574706|ref|XP_003473131.1| PREDICTED: 39S ribosomal protein L41, mitochondrial-like [Cavia
porcellus]
Length = 135
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 35/60 (58%)
Query: 83 VVETIPELIVPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINKDFEANKLDED 142
+ E +PE IVPNL GF LKPYV+YR TA+ LF+E A I KDF+ D D
Sbjct: 51 IKEQVPEFIVPNLTGFKLKPYVNYRAPAGTDTPLTARALFMETVAPAIEKDFKEGTFDPD 110
>gi|397492357|ref|XP_003817090.1| PREDICTED: LOW QUALITY PROTEIN: 39S ribosomal protein L41,
mitochondrial [Pan paniscus]
Length = 246
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 34/60 (56%)
Query: 83 VVETIPELIVPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINKDFEANKLDED 142
+ E +PE +VP+L GF LKPYVSY E + TA LF E A I KDF+ D D
Sbjct: 162 IKEMVPEFVVPDLTGFKLKPYVSYLAPESEETPLTAAQLFSEAVAPAIEKDFKDGTFDPD 221
>gi|126302665|ref|XP_001367279.1| PREDICTED: 39S ribosomal protein L41, mitochondrial-like
[Monodelphis domestica]
Length = 134
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 34/58 (58%)
Query: 83 VVETIPELIVPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINKDFEANKLD 140
V E +PE +VP+L GF LKPYVSYR TAK LF+E A I KDF+ D
Sbjct: 50 VKEMVPEFVVPDLTGFKLKPYVSYRAPAGTDEPLTAKQLFMEAVAPSIEKDFKEGTFD 107
>gi|395506551|ref|XP_003757595.1| PREDICTED: 39S ribosomal protein L41, mitochondrial [Sarcophilus
harrisii]
Length = 134
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 34/58 (58%)
Query: 83 VVETIPELIVPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINKDFEANKLD 140
V E +PE +VP+L GF LKPYVSYR TAK LF+E A I KDF+ D
Sbjct: 50 VKEMVPEFVVPDLTGFKLKPYVSYRAPAGTDEPLTAKQLFMEAVAPSIEKDFKEGTFD 107
>gi|354497010|ref|XP_003510616.1| PREDICTED: 39S ribosomal protein L41, mitochondrial-like
[Cricetulus griseus]
gi|344251183|gb|EGW07287.1| 39S ribosomal protein L41, mitochondrial [Cricetulus griseus]
Length = 135
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 45/74 (60%), Gaps = 4/74 (5%)
Query: 72 RKVLQTSDGR--PVVETIPELIVPNLEGFNLKPYVSYRTNE-IQTPEFTAKDLFIEVYAE 128
R + TS+G+ + E +PE +VP+L GF LKPYV+YR I TP TAK+LF++ A
Sbjct: 38 RTGIYTSNGKFVQIKEMVPEFVVPDLTGFKLKPYVNYRAPAGIDTP-LTAKELFLQTAAP 96
Query: 129 KINKDFEANKLDED 142
I KDF D D
Sbjct: 97 AIEKDFIEGTFDAD 110
>gi|72008280|ref|XP_785814.1| PREDICTED: 39S ribosomal protein L41, mitochondrial-like
[Strongylocentrotus purpuratus]
Length = 128
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 13/101 (12%)
Query: 48 RGTQQHRE------EQKLNPD-PRFTPT-YGVRKVLQTSDGRPVVETIPELIVPNLEGFN 99
RG +H+E + +P+ R PT YGVR + V E IPE++VPNLE F
Sbjct: 13 RGANRHKEMTSKRGNKNFHPNTSRIQPTGYGVRTTWKN-----VKEMIPEIVVPNLEDFP 67
Query: 100 LKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINKDFEANKLD 140
LK YVSY+ + Q T +D+F + A ++ +D ++ K D
Sbjct: 68 LKAYVSYKCPDTQQDPLTPRDIFDKCLAPQVLEDLKSGKYD 108
>gi|426363787|ref|XP_004049014.1| PREDICTED: uncharacterized protein LOC101153650 [Gorilla gorilla
gorilla]
Length = 271
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 34/60 (56%)
Query: 83 VVETIPELIVPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINKDFEANKLDED 142
+ E +PE +VP+L GF LKPYVSY E + TA LF E A I KDF+ D D
Sbjct: 187 IKEMVPEFVVPDLTGFKLKPYVSYLAPESEETPLTAAQLFSEAVAPAIEKDFKDGTFDPD 246
>gi|407261474|ref|XP_003946276.1| PREDICTED: 39S ribosomal protein L41, mitochondrial-like [Mus
musculus]
gi|407263374|ref|XP_003945828.1| PREDICTED: 39S ribosomal protein L41, mitochondrial-like [Mus
musculus]
Length = 153
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 49/85 (57%), Gaps = 6/85 (7%)
Query: 63 PR-FTPTYGVRKV-LQTSDGR--PVVETIPELIVPNLEGFNLKPYVSYRTNE-IQTPEFT 117
PR FT + G +K + TSD + + E +PE +VP+L GF LKPYV+YR I TP T
Sbjct: 45 PRTFTKSRGAKKTGIYTSDRKFVQIKEMVPEFVVPDLTGFKLKPYVNYRAPAGIDTP-LT 103
Query: 118 AKDLFIEVYAEKINKDFEANKLDED 142
K LF E A I KDF+ D D
Sbjct: 104 VKALFQETVAPAIEKDFKDGTFDAD 128
>gi|113461980|ref|NP_001026978.2| 39S ribosomal protein L41, mitochondrial precursor [Mus musculus]
gi|81880390|sp|Q9CQN7.1|RM41_MOUSE RecName: Full=39S ribosomal protein L41, mitochondrial;
Short=L41mt; Short=MRP-L41; Flags: Precursor
gi|12833949|dbj|BAB22727.1| unnamed protein product [Mus musculus]
gi|12848212|dbj|BAB27870.1| unnamed protein product [Mus musculus]
gi|21961173|gb|AAH34728.1| Mitochondrial ribosomal protein L41 [Mus musculus]
gi|148676241|gb|EDL08188.1| mCG55255 [Mus musculus]
Length = 135
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 50/85 (58%), Gaps = 6/85 (7%)
Query: 63 PR-FTPTYGVRKV-LQTSDGR--PVVETIPELIVPNLEGFNLKPYVSYRTNE-IQTPEFT 117
PR FT + G +K + TSD + + E +PE +VP+L GF LKPYV+YR I TP T
Sbjct: 27 PRTFTKSRGAKKTGIYTSDRKFVQIKEMVPEFVVPDLTGFKLKPYVNYRAPAGIDTP-LT 85
Query: 118 AKDLFIEVYAEKINKDFEANKLDED 142
AK LF E A I KDF+ D +
Sbjct: 86 AKALFQETVAPAIEKDFKEGTFDAN 110
>gi|26328195|dbj|BAC27838.1| unnamed protein product [Mus musculus]
Length = 135
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 55/91 (60%), Gaps = 11/91 (12%)
Query: 63 PR-FTPTYGVRKV-LQTSDGR--PVVETIPELIVPNLEGFNLKPYVSYRTNE-IQTPEFT 117
PR FT + G +K + TSD + + E +PE +VP+L GF LKPYV+YR+ I TP T
Sbjct: 27 PRTFTKSRGAKKTGIYTSDRKFVQIKEMVPEFVVPDLTGFKLKPYVNYRSPAGIDTP-LT 85
Query: 118 AKDLFIEVYAEKINKD-----FEANKLDEDG 143
AK LF E A I KD F+AN L++ G
Sbjct: 86 AKALFQETVAPAIEKDIKEGTFDANNLEKYG 116
>gi|405959585|gb|EKC25605.1| 39S ribosomal protein L41, mitochondrial [Crassostrea gigas]
Length = 154
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 38/60 (63%)
Query: 83 VVETIPELIVPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINKDFEANKLDED 142
V E +PEL+VP+L+ LKPYV Y + I EFTA+DLF YA+ I+K F + + D
Sbjct: 84 VKEMMPELVVPDLKDCKLKPYVPYNVSTIHQSEFTAQDLFNTCYAKDIDKKFNEGEYEVD 143
>gi|21265093|ref|NP_115866.1| 39S ribosomal protein L41, mitochondrial [Homo sapiens]
gi|114627762|ref|XP_001140291.1| PREDICTED: 39S ribosomal protein L41, mitochondrial isoform 1 [Pan
troglodytes]
gi|297685870|ref|XP_002820495.1| PREDICTED: 39S ribosomal protein L41, mitochondrial [Pongo abelii]
gi|410043488|ref|XP_003951620.1| PREDICTED: 39S ribosomal protein L41, mitochondrial isoform 2 [Pan
troglodytes]
gi|74750734|sp|Q8IXM3.1|RM41_HUMAN RecName: Full=39S ribosomal protein L41, mitochondrial;
Short=L41mt; Short=MRP-L41; AltName: Full=39S ribosomal
protein L27 homolog; AltName: Full=Bcl-2-interacting
mitochondrial ribosomal protein L41; AltName: Full=Cell
proliferation-inducing gene 3 protein; AltName:
Full=MRP-L27 homolog; Flags: Precursor
gi|25123180|gb|AAH40035.1| Mitochondrial ribosomal protein L41 [Homo sapiens]
gi|37925498|gb|AAP69986.1| proliferation-inducing gene 3 [Homo sapiens]
gi|119608805|gb|EAW88399.1| mitochondrial ribosomal protein L41 [Homo sapiens]
gi|410214652|gb|JAA04545.1| mitochondrial ribosomal protein L41 [Pan troglodytes]
gi|410267956|gb|JAA21944.1| mitochondrial ribosomal protein L41 [Pan troglodytes]
gi|410332781|gb|JAA35337.1| mitochondrial ribosomal protein L41 [Pan troglodytes]
Length = 137
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 34/60 (56%)
Query: 83 VVETIPELIVPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINKDFEANKLDED 142
+ E +PE +VP+L GF LKPYVSY E + TA LF E A I KDF+ D D
Sbjct: 53 IKEMVPEFVVPDLTGFKLKPYVSYLAPESEETPLTAAQLFSEAVAPAIEKDFKDGTFDPD 112
>gi|61740619|ref|NP_001013444.1| 39S ribosomal protein L41, mitochondrial precursor [Rattus
norvegicus]
gi|81882547|sp|Q5BJX1.1|RM41_RAT RecName: Full=39S ribosomal protein L41, mitochondrial;
Short=L41mt; Short=MRP-L41; Flags: Precursor
gi|60551487|gb|AAH91293.1| Mitochondrial ribosomal protein L41 [Rattus norvegicus]
gi|149039428|gb|EDL93648.1| rCG45588 [Rattus norvegicus]
Length = 134
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 43/75 (57%), Gaps = 8/75 (10%)
Query: 69 YGVRKVLQTSDGRPVVETIPELIVPNLEGFNLKPYVSYRTNE-IQTPEFTAKDLFIEVYA 127
Y RK +Q + E +PE +VP+L GF LKPYV+YR I TP TAK LF+E A
Sbjct: 42 YTNRKFVQ------IKEMVPEFVVPDLTGFKLKPYVNYRAPAGIDTP-LTAKALFLETVA 94
Query: 128 EKINKDFEANKLDED 142
I KDF+ D +
Sbjct: 95 PAIEKDFKEGTFDAN 109
>gi|66472774|ref|NP_001018603.1| 39S ribosomal protein L41, mitochondrial precursor [Danio rerio]
gi|82192615|sp|Q502B0.1|RM41_DANRE RecName: Full=39S ribosomal protein L41, mitochondrial;
Short=L41mt; Short=MRP-L41; Flags: Precursor
gi|63100951|gb|AAH95781.1| Zgc:112362 [Danio rerio]
gi|182891906|gb|AAI65499.1| Zgc:112362 protein [Danio rerio]
Length = 135
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 35/61 (57%)
Query: 82 PVVETIPELIVPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINKDFEANKLDE 141
P+ IPE VPNLEGFNLK YVSY+T T + LF EV A +I +D E E
Sbjct: 50 PIRAMIPEFAVPNLEGFNLKAYVSYKTPAGTEEPMTPEKLFNEVVAPQIQRDIEEGVFSE 109
Query: 142 D 142
D
Sbjct: 110 D 110
>gi|390458579|ref|XP_002743551.2| PREDICTED: 39S ribosomal protein L41, mitochondrial [Callithrix
jacchus]
Length = 165
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 34/60 (56%)
Query: 83 VVETIPELIVPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINKDFEANKLDED 142
+ E +PE +VP+L GF LKPYV+YR + TA LF E A I KDF+ D D
Sbjct: 81 IKEMVPEFVVPDLTGFKLKPYVNYRAPAGEETPLTAAQLFSEAVAPAIEKDFKDGTFDPD 140
>gi|392342031|ref|XP_003754491.1| PREDICTED: 39S ribosomal protein L41, mitochondrial-like [Rattus
norvegicus]
gi|392350229|ref|XP_003750600.1| PREDICTED: 39S ribosomal protein L41, mitochondrial-like [Rattus
norvegicus]
Length = 134
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 43/75 (57%), Gaps = 8/75 (10%)
Query: 69 YGVRKVLQTSDGRPVVETIPELIVPNLEGFNLKPYVSYRTNE-IQTPEFTAKDLFIEVYA 127
Y RK +Q + E +PE +VP+L GF LKPYV+YR I TP TAK LF+E A
Sbjct: 42 YTNRKFVQ------IKEMVPEFVVPDLTGFKLKPYVNYRAPAGIDTP-LTAKALFLETVA 94
Query: 128 EKINKDFEANKLDED 142
I KDF+ D +
Sbjct: 95 PAIEKDFKEGTFDTN 109
>gi|402895903|ref|XP_003911050.1| PREDICTED: 39S ribosomal protein L41, mitochondrial isoform 1
[Papio anubis]
gi|402895905|ref|XP_003911051.1| PREDICTED: 39S ribosomal protein L41, mitochondrial isoform 2
[Papio anubis]
Length = 137
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 77 TSDGR--PVVETIPELIVPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINKDF 134
TS GR + E +PE +VP+L GF LKPYV+YR E + TA LF E A I +DF
Sbjct: 45 TSGGRFVQIKEMVPEFVVPDLTGFKLKPYVNYRAPEGEETPLTAAQLFSEAVAPLIVQDF 104
Query: 135 EANKLDED 142
+ D D
Sbjct: 105 KDGTFDPD 112
>gi|73967437|ref|XP_548346.2| PREDICTED: 39S ribosomal protein L41, mitochondrial [Canis lupus
familiaris]
Length = 135
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 32/58 (55%)
Query: 83 VVETIPELIVPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINKDFEANKLD 140
V E +PEL+VP L GF LKPYV+YR TAK LF E A I KDF D
Sbjct: 51 VKEMVPELVVPELTGFRLKPYVNYRVPAGTDQPLTAKQLFREAVAPAIEKDFRDGAFD 108
>gi|403301542|ref|XP_003941446.1| PREDICTED: 39S ribosomal protein L41, mitochondrial, partial
[Saimiri boliviensis boliviensis]
Length = 116
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 35/60 (58%)
Query: 83 VVETIPELIVPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINKDFEANKLDED 142
V E +PE +VP+L GF LKPYV+YR + TA LF EV A I +DF+ D D
Sbjct: 32 VKEMVPEFVVPDLTGFKLKPYVNYRAPAGEEAPLTAAQLFSEVVAPAIEEDFKDGTFDPD 91
>gi|301781508|ref|XP_002926165.1| PREDICTED: 39S ribosomal protein L41, mitochondrial-like
[Ailuropoda melanoleuca]
gi|281345326|gb|EFB20910.1| hypothetical protein PANDA_015787 [Ailuropoda melanoleuca]
Length = 135
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 33/58 (56%)
Query: 83 VVETIPELIVPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINKDFEANKLD 140
V E +PEL+VP L GF LKPYV+YR TA+ LF E A I KDF+ D
Sbjct: 51 VKEMVPELVVPELAGFRLKPYVNYRAQAGTDTPLTAEQLFREAVAPAIEKDFKDGTFD 108
>gi|444521168|gb|ELV13109.1| 39S ribosomal protein L41, mitochondrial [Tupaia chinensis]
Length = 135
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 35/60 (58%)
Query: 83 VVETIPELIVPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINKDFEANKLDED 142
+ E +PE +VP+L GF LKPYV+YR TAK+LF++ A I KDF D +
Sbjct: 51 IKEMVPEFVVPDLTGFKLKPYVNYRAPAGAETPLTAKELFLKAVAPAIEKDFRDGTFDPN 110
>gi|198431936|ref|XP_002122326.1| PREDICTED: hypothetical protein [Ciona intestinalis]
Length = 145
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Query: 79 DGR--PVVETIPELIVPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINKDFE 135
DGR PV + +PE++VP+L+ F+LKPYV+YR I P AKDLF YA I + +
Sbjct: 49 DGRRIPVRDRVPEVVVPDLKDFSLKPYVTYRAEGIHQPPTQAKDLFDAFYAPAIEAELQ 107
>gi|441671879|ref|XP_003279583.2| PREDICTED: rootletin-like [Nomascus leucogenys]
Length = 306
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 32/60 (53%)
Query: 83 VVETIPELIVPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINKDFEANKLDED 142
+ E +PE +VP L F LK YVSYR E + TA LF E A I KDF+ D D
Sbjct: 53 IKEMVPEFVVPALTCFKLKLYVSYRVPESEETSLTAAQLFSEAVARAIEKDFKDGTFDPD 112
>gi|351705292|gb|EHB08211.1| 39S ribosomal protein L41, mitochondrial [Heterocephalus glaber]
Length = 135
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 34/60 (56%)
Query: 83 VVETIPELIVPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINKDFEANKLDED 142
+ E +PE IVPNL GF LKPYV+YR TA+ LF+E A I KD + D D
Sbjct: 51 IKEQVPEFIVPNLIGFKLKPYVNYRLPAGTDTPLTARALFMETAAPAIEKDLKEGTFDPD 110
>gi|355704360|gb|AES02201.1| mitochondrial ribosomal protein L41 [Mustela putorius furo]
Length = 135
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 33/58 (56%)
Query: 83 VVETIPELIVPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINKDFEANKLD 140
V E +PEL+VP L GF L+PYVSYR TA+ LF E A + +DF LD
Sbjct: 51 VQEMVPELVVPELAGFRLRPYVSYRAPAGPDAPLTAEQLFREAAAPAVEEDFRDGTLD 108
>gi|384475835|ref|NP_001245063.1| 39S ribosomal protein L41, mitochondrial [Macaca mulatta]
gi|383420891|gb|AFH33659.1| 39S ribosomal protein L41, mitochondrial [Macaca mulatta]
gi|384943588|gb|AFI35399.1| 39S ribosomal protein L41, mitochondrial [Macaca mulatta]
Length = 137
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 35/60 (58%)
Query: 83 VVETIPELIVPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINKDFEANKLDED 142
+ E +PE +VP+L GF LKPYV+YR E + TA LF E A I +DF+ D D
Sbjct: 53 IKEMVPEFVVPDLTGFKLKPYVNYRAPEGEETPLTAAQLFSEAVAPLIVQDFKDGTFDPD 112
>gi|355567288|gb|EHH23629.1| hypothetical protein EGK_07132 [Macaca mulatta]
Length = 120
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 35/60 (58%)
Query: 83 VVETIPELIVPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINKDFEANKLDED 142
+ E +PE +VP+L GF LKPYV+YR E + TA LF E A I +DF+ D D
Sbjct: 36 IKEMVPEFVVPDLTGFKLKPYVNYRAPEGEETPLTAAQLFSEAVAPLIVQDFKDGTFDPD 95
>gi|431899062|gb|ELK07432.1| 39S ribosomal protein L41, mitochondrial [Pteropus alecto]
Length = 135
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 34/60 (56%)
Query: 83 VVETIPELIVPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINKDFEANKLDED 142
V E +PEL+VP L GF LKPYV+YR TA+ LF E A I +DF+ D +
Sbjct: 51 VKEMVPELVVPELAGFKLKPYVNYRVPAGTDTPLTAEQLFRETAAPAIERDFKDGTFDPE 110
>gi|387017106|gb|AFJ50671.1| 39S ribosomal protein L41, mitochondrial [Crotalus adamanteus]
Length = 135
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 34/61 (55%)
Query: 83 VVETIPELIVPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINKDFEANKLDED 142
V + +P L+VP+L GF LKPYVSYR P +A+ LF + A I KD + D D
Sbjct: 51 VKDRVPVLMVPDLTGFKLKPYVSYRAPAGSEPPLSARALFQQTAAPLIEKDVQRGTFDPD 110
Query: 143 G 143
Sbjct: 111 A 111
>gi|410979617|ref|XP_003996178.1| PREDICTED: 39S ribosomal protein L41, mitochondrial [Felis catus]
Length = 135
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 32/58 (55%)
Query: 83 VVETIPELIVPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINKDFEANKLD 140
V E +PEL+VP L GF LKPYV+YR TA+ LF E A I KD+ D
Sbjct: 51 VKEMVPELVVPELAGFKLKPYVNYRVPAGTDVPLTAEQLFREAVAPAIEKDYRDGTFD 108
>gi|395844184|ref|XP_003794842.1| PREDICTED: 39S ribosomal protein L41, mitochondrial [Otolemur
garnettii]
Length = 135
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 40/67 (59%), Gaps = 7/67 (10%)
Query: 83 VVETIPELIVPNLEGFNLKPYVSYRTNE-IQTPEFTAKDLFIEVYAEKINKD-----FEA 136
+ E +PE +VP+L GF LKPYVSYR + TP TA++LF A I KD F+
Sbjct: 51 IKEMVPEFVVPDLAGFKLKPYVSYRAPAGVDTP-LTARELFEAAAAPAIEKDVKDGTFDP 109
Query: 137 NKLDEDG 143
N L++ G
Sbjct: 110 NSLEKYG 116
>gi|62858839|ref|NP_001016279.1| mitochondrial ribosomal protein L41 [Xenopus (Silurana) tropicalis]
gi|163915458|gb|AAI57288.1| mitochondrial ribosomal protein L41 [Xenopus (Silurana) tropicalis]
Length = 135
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 70 GVRKV-LQTSDGR--PVVETIPELIVPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVY 126
G +K+ TS G+ V E +P +VP+L GF LKPYVSYR T K LF+E
Sbjct: 35 GAKKIGYLTSSGKFVKVREMVPAFVVPDLTGFKLKPYVSYRAPPGSEEPMTPKKLFMETA 94
Query: 127 AEKINKDFEAN 137
+I KD +
Sbjct: 95 GPQIEKDLQGG 105
>gi|148222053|ref|NP_001085417.1| 39S ribosomal protein L41-B, mitochondrial precursor [Xenopus
laevis]
gi|82184781|sp|Q6INF3.1|RM41B_XENLA RecName: Full=39S ribosomal protein L41-B, mitochondrial;
Short=L41mt-B; Short=MRP-L41-B; Flags: Precursor
gi|48735076|gb|AAH72329.1| MGC83146 protein [Xenopus laevis]
Length = 135
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 5/94 (5%)
Query: 46 INRGTQQHRE-EQKLNPDPRFTPTYGVRKV-LQTSDGR--PVVETIPELIVPNLEGFNLK 101
+ RG + E KL P+ + G +K+ TS G+ V E +P +VP+L GF LK
Sbjct: 11 LVRGADRMAECTSKLGPN-SYNKGRGAKKIGYLTSSGKFVKVREMVPVFVVPDLTGFKLK 69
Query: 102 PYVSYRTNEIQTPEFTAKDLFIEVYAEKINKDFE 135
PYVSY+ TAK LF+E +I KD +
Sbjct: 70 PYVSYKAPPGTEDPMTAKKLFMETVGPQIEKDLQ 103
>gi|355752896|gb|EHH56942.1| hypothetical protein EGM_06455, partial [Macaca fascicularis]
Length = 80
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 32/55 (58%)
Query: 88 PELIVPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINKDFEANKLDED 142
PE +VP+L GF LKPYV+YR E + TA LF E A I +DF+ D D
Sbjct: 1 PEFVVPDLTGFKLKPYVNYRAPEGEETPLTAAQLFSEAVAPLIVQDFKDGTFDPD 55
>gi|349804157|gb|AEQ17551.1| putative 39s ribosomal protein l41-B mitochondrial precursor
[Hymenochirus curtipes]
Length = 83
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 48 RGTQQHRE-EQKLNPDPRFTPTYGVRKV-LQTSDGR--PVVETIPELIVPNLEGFNLKPY 103
RG + E KL P+ + G +K+ TS G+ V E +PE +VPNL GF L+PY
Sbjct: 4 RGADRTAECTSKLGPN-SYNKGRGAKKIGYLTSSGKFIKVKEMVPEFVVPNLTGFKLRPY 62
Query: 104 VSYRTNEIQTPEFTAKDLFIE 124
VSY+ TAK LF+E
Sbjct: 63 VSYKAPPGTEEPMTAKKLFLE 83
>gi|147899533|ref|NP_001086478.1| 39S ribosomal protein L41-A, mitochondrial precursor [Xenopus
laevis]
gi|82183610|sp|Q6DJI4.1|RM41A_XENLA RecName: Full=39S ribosomal protein L41-A, mitochondrial;
Short=L41mt-A; Short=MRP-L41-A; Flags: Precursor
gi|49670436|gb|AAH75195.1| Mrpl41-prov protein [Xenopus laevis]
Length = 135
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 31/53 (58%)
Query: 83 VVETIPELIVPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINKDFE 135
V E +P +VP+L GF LKPYVSY+ TAK LF+E +I KD +
Sbjct: 51 VREMVPVFVVPDLTGFKLKPYVSYKAPPGTEDPMTAKKLFMETVGPQIEKDLQ 103
>gi|156357037|ref|XP_001624031.1| predicted protein [Nematostella vectensis]
gi|156210782|gb|EDO31931.1| predicted protein [Nematostella vectensis]
Length = 103
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 48/105 (45%), Gaps = 22/105 (20%)
Query: 21 ALVSGSGYGSTGASYGKKNFRKFNWINRGTQQHREEQKLNPDPRFTPTYGVRKVLQTSDG 80
++ G+ G G KNF K RG + P F G K++Q
Sbjct: 8 GIIRGATRGVLTGKKGNKNFYK----GRGVR----------PPGFHTRRGEYKIVQ---- 49
Query: 81 RPVVETIPELIVPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEV 125
+PE IVP+L G +LKPYVSY+ ++ TP TA+ L ++
Sbjct: 50 ----RKVPEFIVPDLSGCDLKPYVSYKAPKVDTPPLTAEGLLEQI 90
>gi|308487066|ref|XP_003105729.1| CRE-MRPL-41 protein [Caenorhabditis remanei]
gi|308255185|gb|EFO99137.1| CRE-MRPL-41 protein [Caenorhabditis remanei]
Length = 190
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 47/87 (54%), Gaps = 20/87 (22%)
Query: 36 GKKNFRKFNWINRGTQQHREE-------QKLNPDP--RFTPTYGVR----KVLQTSDGRP 82
G N+ KF W Q+RE QKLNP R+T GV+ +T + P
Sbjct: 37 GPMNYEKFKWPG----QNREFPELSPKFQKLNPKELHRYT---GVQPDGFHDQKTGEFVP 89
Query: 83 VVETIPELIVPNLEGFNLKPYVSYRTN 109
V E EL+VPNL+GF L+PYVSYRT+
Sbjct: 90 VKEMRSELVVPNLDGFKLRPYVSYRTD 116
>gi|17531321|ref|NP_493695.1| Protein MRPL-41 [Caenorhabditis elegans]
gi|74961322|sp|P90993.1|RM41_CAEEL RecName: Full=39S ribosomal protein L41, mitochondrial;
Short=L41mt; Short=MRP-L41; Flags: Precursor
gi|351018027|emb|CCD61937.1| Protein MRPL-41 [Caenorhabditis elegans]
Length = 180
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 43/84 (51%), Gaps = 14/84 (16%)
Query: 36 GKKNFRKFNWINRGTQQHREEQKLNPD-PRFTPTYGVRKVLQTSDG---------RPVVE 85
G N+ KF W Q+RE +L+P + P R +DG PV E
Sbjct: 37 GPMNYEKFKWPG----QNREFPELSPKFQKLNPKELHRYTGVQADGFHDEKTGEFVPVKE 92
Query: 86 TIPELIVPNLEGFNLKPYVSYRTN 109
EL+VPNL+GF L+PYVSYRT+
Sbjct: 93 MRSELVVPNLDGFKLRPYVSYRTD 116
>gi|341896838|gb|EGT52773.1| hypothetical protein CAEBREN_12649 [Caenorhabditis brenneri]
Length = 188
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 50/95 (52%), Gaps = 21/95 (22%)
Query: 29 GSTGA-SYGKKNFRKFNWINRGTQQHREE-------QKLNPDP--RFTPTYGVR----KV 74
G+TG G N+ KF W Q+RE QKLNP R+T GV+
Sbjct: 29 GATGQRKIGPMNYEKFKWPG----QNREFPELSPKFQKLNPKELHRYT---GVQPDGYHD 81
Query: 75 LQTSDGRPVVETIPELIVPNLEGFNLKPYVSYRTN 109
+T + PV E EL+VPNL+GF L+PYVSYR +
Sbjct: 82 QKTGEFVPVKEMRSELVVPNLDGFKLRPYVSYRVD 116
>gi|170584244|ref|XP_001896915.1| hypothetical protein [Brugia malayi]
gi|170584246|ref|XP_001896916.1| hypothetical protein [Brugia malayi]
gi|158595692|gb|EDP34223.1| conserved hypothetical protein [Brugia malayi]
gi|158595693|gb|EDP34224.1| conserved hypothetical protein [Brugia malayi]
Length = 196
Score = 43.1 bits (100), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 51/111 (45%), Gaps = 23/111 (20%)
Query: 22 LVSGSGYGSTGASYGKKNFRKFN----WINRGTQ---------QHREEQKLNP-----DP 63
LVS S Y + + F+ W RG QHRE +L+P +P
Sbjct: 7 LVSTRSVRSLNPHYFRPPWPIFSKAQGWRKRGPSIHERYQLPGQHREFPELSPKFKKENP 66
Query: 64 RFTPTY-GVRKV----LQTSDGRPVVETIPELIVPNLEGFNLKPYVSYRTN 109
+ Y GV+ V T + V E PELIVP+L GF L PYVSYRT+
Sbjct: 67 KELHHYTGVQDVGFVDPVTGEFVHVKEMYPELIVPDLRGFRLCPYVSYRTD 117
>gi|196004672|ref|XP_002112203.1| hypothetical protein TRIADDRAFT_56002 [Trichoplax adhaerens]
gi|190586102|gb|EDV26170.1| hypothetical protein TRIADDRAFT_56002 [Trichoplax adhaerens]
Length = 128
Score = 43.1 bits (100), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 27/39 (69%)
Query: 87 IPELIVPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEV 125
IPEL+VP+L F LKPYVS++ +I P T++DL +
Sbjct: 53 IPELMVPDLTDFELKPYVSHKALKINPPIVTSEDLLTRL 91
>gi|268534056|ref|XP_002632158.1| Hypothetical protein CBG07017 [Caenorhabditis briggsae]
Length = 178
Score = 42.7 bits (99), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 26/34 (76%)
Query: 76 QTSDGRPVVETIPELIVPNLEGFNLKPYVSYRTN 109
+T + PV E +L+VPNL+GF L+PYVSYRT+
Sbjct: 83 KTGEFVPVKEMRSQLVVPNLDGFKLRPYVSYRTD 116
>gi|340378082|ref|XP_003387557.1| PREDICTED: 39S ribosomal protein L41, mitochondrial-like
[Amphimedon queenslandica]
Length = 92
Score = 42.4 bits (98), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 27/42 (64%)
Query: 81 RPVVETIPELIVPNLEGFNLKPYVSYRTNEIQTPEFTAKDLF 122
R V IPE++VP+L F+LKPYVS++ + T KDL+
Sbjct: 43 RVVKSMIPEIVVPDLSEFDLKPYVSHKAPYVVGKPLTGKDLY 84
>gi|449673364|ref|XP_004207937.1| PREDICTED: 39S ribosomal protein L41-A, mitochondrial-like [Hydra
magnipapillata]
Length = 100
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 25/106 (23%)
Query: 33 ASYGKKNFRKFNWINRGTQQHREEQKLNPDPRFTPTYGVRKVLQTSDGRPVVETIPELIV 92
+G KNF K RG + +P F +G ++ V + + E IV
Sbjct: 17 GKHGNKNFYK----GRGVR----------NPGFNTKFGAYRI--------VPKKVHEFIV 54
Query: 93 PNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINKDFEANK 138
P+L GF +KPYVSYR +I + T + L ++ K N D +K
Sbjct: 55 PDLTGFQMKPYVSYRVPQITNEKVTGESLLKDI---KTNIDLIVHK 97
>gi|402582919|gb|EJW76864.1| 39S ribosomal protein L41 [Wuchereria bancrofti]
Length = 194
Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 39/68 (57%), Gaps = 10/68 (14%)
Query: 52 QHREEQKLNP-----DPRFTPTY-GVRKV----LQTSDGRPVVETIPELIVPNLEGFNLK 101
QHRE +L+P +P+ Y GV+ V T + V E PEL+VP+L GF L
Sbjct: 50 QHREFPELSPKFKKENPKELHHYTGVQDVGFVDPVTGEFVHVEEMYPELVVPDLRGFRLC 109
Query: 102 PYVSYRTN 109
PYVSYRT+
Sbjct: 110 PYVSYRTD 117
>gi|312070962|ref|XP_003138388.1| hypothetical protein LOAG_02803 [Loa loa]
gi|307766442|gb|EFO25676.1| hypothetical protein LOAG_02803 [Loa loa]
Length = 194
Score = 40.4 bits (93), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 18/27 (66%), Positives = 21/27 (77%)
Query: 83 VVETIPELIVPNLEGFNLKPYVSYRTN 109
V E PEL+VP+L GF L PYVSYRT+
Sbjct: 91 VEEMHPELVVPDLRGFRLCPYVSYRTD 117
>gi|256079760|ref|XP_002576153.1| hypothetical protein [Schistosoma mansoni]
gi|353229970|emb|CCD76141.1| hypothetical protein Smp_148060 [Schistosoma mansoni]
Length = 147
Score = 39.3 bits (90), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 85 ETIPELIVPN-LEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINKDFEANKLDED 142
ET + IVPN L+ LKPYVS+R+ ++ TA+ LF Y++KI + F+ +E+
Sbjct: 79 ETHLDFIVPNDLDKCELKPYVSWRSKLVEEGPLTAEVLFNNRYSQKITEMFKNGASNEE 137
>gi|156362048|ref|XP_001625594.1| predicted protein [Nematostella vectensis]
gi|156212434|gb|EDO33494.1| predicted protein [Nematostella vectensis]
Length = 846
Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 38/87 (43%), Gaps = 22/87 (25%)
Query: 21 ALVSGSGYGSTGASYGKKNFRKFNWINRGTQQHREEQKLNPDPRFTPTYGVRKVLQTSDG 80
++ G+ G G KNF K RG + P F G K++Q
Sbjct: 8 GIIRGATRGVLTGKKGNKNFYK----GRGVR----------PPGFHTRRGEYKIVQ---- 49
Query: 81 RPVVETIPELIVPNLEGFNLKPYVSYR 107
+PE IVP+L G +LKPYVSY+
Sbjct: 50 ----RKVPEFIVPDLSGCDLKPYVSYK 72
>gi|255580578|ref|XP_002531113.1| conserved hypothetical protein [Ricinus communis]
gi|223529309|gb|EEF31278.1| conserved hypothetical protein [Ricinus communis]
Length = 92
Score = 37.0 bits (84), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 83 VVETIPELIVPNLEGFNLKPYVSYRTNEIQTPEFTA 118
V E +P +VP+L F LKPYVS +I+T E +A
Sbjct: 54 VPEKLPNYVVPDLTDFKLKPYVSQCATQIKTTEASA 89
>gi|164516289|emb|CAP48265.1| putative integron gene cassette protein [uncultured bacterium]
Length = 133
Score = 36.6 bits (83), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 56/122 (45%), Gaps = 10/122 (8%)
Query: 21 ALVSGSGYGSTGASYGKKNFRKFNWINRGTQQHREEQKLNPDPRFTPTYGVRKVLQTSDG 80
A+ G GYG+ G K+F+ + +Q RE+++ N R V L SD
Sbjct: 8 AVQCGYGYGNDGLGVTNKHFKPRGGSHADARQ-REQRRRNSGKRAPVESRVNAALGRSDL 66
Query: 81 RPVVETIPELIVPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIE-VYAEKIN----KDFE 135
R V E P+ EG + + + Q+P +D+F+E AE+++ +DFE
Sbjct: 67 RAVPLMRVEPRGPSAEGLSFQEF----RKVCQSPRLLYRDIFVEGSLAERVDEVSLQDFE 122
Query: 136 AN 137
++
Sbjct: 123 SS 124
>gi|324507636|gb|ADY43236.1| 39S ribosomal protein L41 [Ascaris suum]
Length = 209
Score = 36.2 bits (82), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 5/57 (8%)
Query: 57 QKLNPDPRFTPTYGVRK--VLQTSDGRPVV--ETIPELIVPNLEGFNLKPYVSYRTN 109
QKLNP P GV+ + + G VV E EL+VP+L F L+PYVS++T+
Sbjct: 63 QKLNP-PELADYTGVQPNGYVDPNSGEFVVVKEACAELVVPDLTDFKLRPYVSFKTD 118
>gi|384251997|gb|EIE25474.1| hypothetical protein COCSUDRAFT_52881 [Coccomyxa subellipsoidea
C-169]
Length = 86
Score = 35.8 bits (81), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 20/27 (74%)
Query: 87 IPELIVPNLEGFNLKPYVSYRTNEIQT 113
+P+ +VP+L GF LKPYV+Y + ++
Sbjct: 58 LPDYVVPDLTGFKLKPYVAYESKAVEA 84
>gi|71653287|ref|XP_815283.1| mismatch repair protein MSH4 [Trypanosoma cruzi strain CL Brener]
gi|70880328|gb|EAN93432.1| mismatch repair protein MSH4, putative [Trypanosoma cruzi]
Length = 1264
Score = 35.8 bits (81), Expect = 8.8, Method: Composition-based stats.
Identities = 33/138 (23%), Positives = 55/138 (39%), Gaps = 10/138 (7%)
Query: 54 REEQKLNPDPRFTPTYGVRKVLQTSDGRPVVETIPELIVPNLEGFNLKPYVSYRTNEIQT 113
R E +L P P YG+R + +P ++ EL+ P +EG V ++
Sbjct: 1133 RFEHRLIPGPSLVDHYGLRLAERVGFFKPALDLAKELL-PLMEGVRGAQQVGNTDHDAAA 1191
Query: 114 PEF--TAKDLFIEVYAEKINKDFEANKLDEDGNPLQPSDNELLTPEEAEKRARKTGSDLF 171
PE +D +EV ++ N+ D N QP+ E + + A T
Sbjct: 1192 PEAEEVGRDERVEVLSDGRNRGEPGESGDAHDNASQPT-------EVSARLASATDLSSI 1244
Query: 172 DQEVDVGDRTQITKDYYL 189
D D T+ +++YL
Sbjct: 1245 TAVSDESDITETMRNFYL 1262
>gi|145543442|ref|XP_001457407.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124425223|emb|CAK90010.1| unnamed protein product [Paramecium tetraurelia]
Length = 141
Score = 35.8 bits (81), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 10/51 (19%)
Query: 71 VRKVLQTSD--------GRPVVET--IPELIVPNLEGFNLKPYVSYRTNEI 111
+RK+ Q SD + VV+ IP+ +P+L GF LKPYVSY T ++
Sbjct: 59 IRKLRQESDRVFGKFVGSKFVVDKSRIPQYDIPDLTGFELKPYVSYHTPQV 109
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.313 0.136 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,403,728,798
Number of Sequences: 23463169
Number of extensions: 156169032
Number of successful extensions: 316032
Number of sequences better than 100.0: 145
Number of HSP's better than 100.0 without gapping: 118
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 315869
Number of HSP's gapped (non-prelim): 146
length of query: 189
length of database: 8,064,228,071
effective HSP length: 134
effective length of query: 55
effective length of database: 9,215,130,721
effective search space: 506832189655
effective search space used: 506832189655
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 72 (32.3 bits)