Your job contains 1 sequence.
>psy3289
MVTKLLQIIDVPGPIIDRGGALVSGSGYGSTGASYGKKNFRKFNWINRGTQQHREEQKLN
PDPRFTPTYGVRKVLQTSDGRPVVETIPELIVPNLEGFNLKPYVSYRTNEIQTPEFTAKD
LFIEVYAEKINKDFEANKLDEDGNPLQPSDNELLTPEEAEKRARKTGSDLFDQEVDVGDR
TQITKDYYL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy3289
(189 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0034001 - symbol:mRpL41 "mitochondrial ribosomal p... 317 1.9e-28 1
UNIPROTKB|Q291A0 - symbol:mRpL41 "39S ribosomal protein L... 283 7.6e-25 1
MGI|MGI:1333816 - symbol:Mrpl41 "mitochondrial ribosomal ... 158 1.3e-11 1
UNIPROTKB|A5PJ71 - symbol:MRPL41 "Uncharacterized protein... 152 5.8e-11 1
UNIPROTKB|E1BU45 - symbol:MRPL41 "Uncharacterized protein... 151 7.4e-11 1
RGD|1310241 - symbol:Mrpl41 "mitochondrial ribosomal prot... 149 1.2e-10 1
ZFIN|ZDB-GENE-050522-200 - symbol:mrpl41 "mitochondrial r... 142 6.6e-10 1
UNIPROTKB|Q8IXM3 - symbol:MRPL41 "39S ribosomal protein L... 138 1.8e-09 1
UNIPROTKB|E2R2N8 - symbol:MRPL41 "Uncharacterized protein... 136 2.9e-09 1
UNIPROTKB|Q6INF3 - symbol:mrpl41-b "39S ribosomal protein... 135 3.6e-09 1
UNIPROTKB|Q6DJI4 - symbol:mrpl41-a "39S ribosomal protein... 126 3.3e-08 1
WB|WBGene00015185 - symbol:mrpl-41 species:6239 "Caenorha... 124 1.2e-07 1
UNIPROTKB|P90993 - symbol:mrpl-41 "39S ribosomal protein ... 124 1.2e-07 1
>FB|FBgn0034001 [details] [associations]
symbol:mRpL41 "mitochondrial ribosomal protein L41"
species:7227 "Drosophila melanogaster" [GO:0006412 "translation"
evidence=ISS] [GO:0003735 "structural constituent of ribosome"
evidence=ISS] [GO:0005762 "mitochondrial large ribosomal subunit"
evidence=ISS] [GO:0030529 "ribonucleoprotein complex" evidence=ISS]
EMBL:AE013599 GO:GO:0006412 GO:GO:0005762 GO:GO:0003735
InterPro:IPR019189 Pfam:PF09809 CTD:64975 eggNOG:NOG264900
EMBL:AY071157 RefSeq:NP_611022.2 UniGene:Dm.6088 IntAct:Q7JZM8
STRING:Q7JZM8 PaxDb:Q7JZM8 PRIDE:Q7JZM8 EnsemblMetazoa:FBtr0087400
GeneID:36688 KEGG:dme:Dmel_CG12954 FlyBase:FBgn0034001
GeneTree:ENSGT00390000013158 InParanoid:Q7JZM8 OMA:IPDIIVP
OrthoDB:EOG4BZKJZ PhylomeDB:Q7JZM8 GenomeRNAi:36688 NextBio:799875
Bgee:Q7JZM8 Uniprot:Q7JZM8
Length = 166
Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 73/140 (52%), Positives = 94/140 (67%)
Query: 37 KKNFRKFNWIN-RGTQQHREEQKL--NPDPRFTPTYGVRKVLQTSDGR--PVVETIPELI 91
K+NFRKFN N RGT+ +E QK NP P GVR DG+ + E IP++I
Sbjct: 28 KRNFRKFNAYNKRGTRVVKEAQKTLANP-PVAIHKRGVRDTGILVDGQYVEIPEKIPDII 86
Query: 92 VPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINKDFEANKLDEDGNPLQPSDN 151
VP+L G LKPYVSY+ ++ EFT+ DLF VY++KI +DF+A KL +DG+ +PS N
Sbjct: 87 VPDLTGCKLKPYVSYKAPDVVQSEFTSLDLFNAVYSQKIIEDFKAGKLQKDGSAKEPSVN 146
Query: 152 ELLTPEEAEKRARKTGSDLF 171
E LTPEEA +RARKTGSD+F
Sbjct: 147 EQLTPEEALQRARKTGSDIF 166
>UNIPROTKB|Q291A0 [details] [associations]
symbol:mRpL41 "39S ribosomal protein L41, mitochondrial"
species:46245 "Drosophila pseudoobscura pseudoobscura" [GO:0003735
"structural constituent of ribosome" evidence=ISS] [GO:0005762
"mitochondrial large ribosomal subunit" evidence=ISS] [GO:0006412
"translation" evidence=ISS] [GO:0030529 "ribonucleoprotein complex"
evidence=ISS] GO:GO:0006412 GO:GO:0005762 GO:GO:0003735
EMBL:CM000071 GenomeReviews:CM000071_GR InterPro:IPR019189
Pfam:PF09809 eggNOG:NOG264900 OMA:IPDIIVP OrthoDB:EOG4BZKJZ
RefSeq:XP_001360637.1 GeneID:4804006 KEGG:dpo:Dpse_GA11937
FlyBase:FBgn0071986 InParanoid:Q291A0 Uniprot:Q291A0
Length = 166
Score = 283 (104.7 bits), Expect = 7.6e-25, P = 7.6e-25
Identities = 66/139 (47%), Positives = 86/139 (61%)
Query: 37 KKNFRKFN-WINRGTQQHREEQKLNPDPRFT-PTYGVRKVLQTSDGR--PVVETIPELIV 92
K+NFRKFN RGT+ +E QK +P GVR DG+ + E IP++IV
Sbjct: 28 KRNFRKFNVHSKRGTRVVKEAQKTMANPPVPIDKRGVRDTGILVDGKFVEIPEKIPDIIV 87
Query: 93 PNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINKDFEANKLDEDGNPLQPSDNE 152
P+L LKPYVSY+ E+ EFT+ DLF VY++KI +DF+A L DG+P +PS E
Sbjct: 88 PDLTDCKLKPYVSYKAPEVVQSEFTSLDLFNAVYSKKIVEDFKAGSLQADGSPKEPSAEE 147
Query: 153 LLTPEEAEKRARKTGSDLF 171
LT EA RAR+TGSD+F
Sbjct: 148 KLTSSEAFLRARRTGSDIF 166
>MGI|MGI:1333816 [details] [associations]
symbol:Mrpl41 "mitochondrial ribosomal protein L41"
species:10090 "Mus musculus" [GO:0003735 "structural constituent of
ribosome" evidence=ISO] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005762 "mitochondrial large ribosomal subunit" evidence=ISO]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=ISO] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=ISO] MGI:MGI:1333816
GO:GO:0006915 GO:GO:0006412 GO:GO:0007049 GO:GO:0005762
GO:GO:0003735 InterPro:IPR019189 Pfam:PF09809 HOVERGEN:HBG080323
CTD:64975 eggNOG:NOG264900 HOGENOM:HOG000231555 OrthoDB:EOG4C2HBW
GeneTree:ENSGT00390000013158 OMA:GPRTFYK EMBL:AK003340
EMBL:AK011837 EMBL:AK032370 EMBL:BC034728 IPI:IPI00378520
RefSeq:NP_001026978.2 UniGene:Mm.23010 STRING:Q9CQN7 PaxDb:Q9CQN7
PRIDE:Q9CQN7 DNASU:107733 Ensembl:ENSMUST00000045604 GeneID:107733
KEGG:mmu:107733 InParanoid:Q9CQN7 NextBio:359340 Bgee:Q9CQN7
CleanEx:MM_MRPL41 Genevestigator:Q9CQN7 Uniprot:Q9CQN7
Length = 135
Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 44/96 (45%), Positives = 56/96 (58%)
Query: 63 PR-FTPTYGVRKV-LQTSDGR--PVVETIPELIVPNLEGFNLKPYVSYRTNE-IQTPEFT 117
PR FT + G +K + TSD + + E +PE +VP+L GF LKPYV+YR I TP T
Sbjct: 27 PRTFTKSRGAKKTGIYTSDRKFVQIKEMVPEFVVPDLTGFKLKPYVNYRAPAGIDTP-LT 85
Query: 118 AKDLFIEVYAEKINKDF-----EANKLDEDG-NPLQ 147
AK LF E A I KDF +AN L++ G P Q
Sbjct: 86 AKALFQETVAPAIEKDFKEGTFDANNLEKYGFEPTQ 121
>UNIPROTKB|A5PJ71 [details] [associations]
symbol:MRPL41 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006412 "translation" evidence=IEA] [GO:0005762
"mitochondrial large ribosomal subunit" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] GO:GO:0006412
GO:GO:0005762 GO:GO:0003735 InterPro:IPR019189 Pfam:PF09809
HOVERGEN:HBG080323 CTD:64975 eggNOG:NOG264900 HOGENOM:HOG000231555
OrthoDB:EOG4C2HBW GeneTree:ENSGT00390000013158 EMBL:DAAA02032391
EMBL:BC141989 IPI:IPI00697549 RefSeq:NP_001092835.1 UniGene:Bt.9242
STRING:A5PJ71 Ensembl:ENSBTAT00000056731 GeneID:506521
KEGG:bta:506521 InParanoid:A5PJ71 OMA:LFMETAG NextBio:20867638
Uniprot:A5PJ71
Length = 135
Score = 152 (58.6 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 31/60 (51%), Positives = 38/60 (63%)
Query: 83 VVETIPELIVPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINKDFEANKLDED 142
V E +PEL+VP+L GF LKPYV+YR E TAK LF+E A I KDF+A D +
Sbjct: 51 VKEMVPELVVPDLAGFKLKPYVNYRAPEGTDVPLTAKQLFLETAAPAIEKDFKAGTFDPE 110
>UNIPROTKB|E1BU45 [details] [associations]
symbol:MRPL41 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005762 "mitochondrial large ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] GO:GO:0006412
GO:GO:0005762 GO:GO:0003735 InterPro:IPR019189 Pfam:PF09809
CTD:64975 GeneTree:ENSGT00390000013158 OMA:GPRTFYK
EMBL:AADN02026927 IPI:IPI00597925 RefSeq:XP_415536.1
UniGene:Gga.1858 Ensembl:ENSGALT00000014235 GeneID:417261
KEGG:gga:417261 NextBio:20820591 Uniprot:E1BU45
Length = 135
Score = 151 (58.2 bits), Expect = 7.4e-11, P = 7.4e-11
Identities = 39/95 (41%), Positives = 55/95 (57%)
Query: 63 PR-FTPTYGVRKV-LQTSDGRPVV--ETIPELIVPNLEGFNLKPYVSYRTNEIQTPEFTA 118
PR + G +K+ + TS + ++ E +P+ +VP+L GF LKPYVSYR E P TA
Sbjct: 27 PRSYNKGRGAKKMGVLTSSKKFILIKEMVPQFVVPDLAGFKLKPYVSYRAPEGSEPPMTA 86
Query: 119 KDLFIEVYAEKINKD-----FEANKLDEDG-NPLQ 147
K LF E+ A +I KD F+ N L++ G P Q
Sbjct: 87 KQLFTELVAPRIEKDVKEGTFDPNALEKYGFEPTQ 121
>RGD|1310241 [details] [associations]
symbol:Mrpl41 "mitochondrial ribosomal protein L41"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=ISO;ISS] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0005762 "mitochondrial large
ribosomal subunit" evidence=ISO;ISS] [GO:0006412 "translation"
evidence=ISO;ISS] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=ISO;ISS] RGD:1310241
GO:GO:0006915 GO:GO:0006412 GO:GO:0007049 GO:GO:0005762
GO:GO:0003735 InterPro:IPR019189 Pfam:PF09809 HOVERGEN:HBG080323
CTD:64975 eggNOG:NOG264900 HOGENOM:HOG000231555 OrthoDB:EOG4C2HBW
GeneTree:ENSGT00390000013158 OMA:GPRTFYK EMBL:BC091293
IPI:IPI00198811 RefSeq:NP_001013444.1 UniGene:Rn.92811
IntAct:Q5BJX1 STRING:Q5BJX1 PRIDE:Q5BJX1 Ensembl:ENSRNOT00000044802
GeneID:296551 KEGG:rno:296551 UCSC:RGD:1310241 InParanoid:Q5BJX1
NextBio:641368 Genevestigator:Q5BJX1 Uniprot:Q5BJX1
Length = 134
Score = 149 (57.5 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 41/95 (43%), Positives = 55/95 (57%)
Query: 63 PR-FTPTYGVRKVLQTSDGR--PVVETIPELIVPNLEGFNLKPYVSYRTNE-IQTPEFTA 118
PR FT + G +K ++ + + E +PE +VP+L GF LKPYV+YR I TP TA
Sbjct: 27 PRTFTKSRGAKKTGFYTNRKFVQIKEMVPEFVVPDLTGFKLKPYVNYRAPAGIDTP-LTA 85
Query: 119 KDLFIEVYAEKINKDF-----EANKLDEDG-NPLQ 147
K LF+E A I KDF +AN L++ G P Q
Sbjct: 86 KALFLETVAPAIEKDFKEGTFDANNLEKYGFEPTQ 120
>ZFIN|ZDB-GENE-050522-200 [details] [associations]
symbol:mrpl41 "mitochondrial ribosomal protein L41"
species:7955 "Danio rerio" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0005762 "mitochondrial large ribosomal
subunit" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0005840 "ribosome" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] ZFIN:ZDB-GENE-050522-200 GO:GO:0006915
GO:GO:0006412 GO:GO:0007049 GO:GO:0005762 GO:GO:0003735
InterPro:IPR019189 Pfam:PF09809 HOVERGEN:HBG080323 EMBL:BC095781
IPI:IPI00504813 RefSeq:NP_001018603.1 UniGene:Dr.84766
STRING:Q502B0 GeneID:553805 KEGG:dre:553805 CTD:64975
eggNOG:NOG264900 HOGENOM:HOG000231555 InParanoid:Q502B0
OrthoDB:EOG4C2HBW NextBio:20880523 ArrayExpress:Q502B0
Uniprot:Q502B0
Length = 135
Score = 142 (55.0 bits), Expect = 6.6e-10, P = 6.6e-10
Identities = 37/84 (44%), Positives = 45/84 (53%)
Query: 63 PR-FTPTYGVRKV-LQTSDGR--PVVETIPELIVPNLEGFNLKPYVSYRTNEIQTPEFTA 118
PR F + G R + TS + P+ IPE VPNLEGFNLK YVSY+T T
Sbjct: 27 PRTFYKSRGARPTGIVTSSRKFIPIRAMIPEFAVPNLEGFNLKAYVSYKTPAGTEEPMTP 86
Query: 119 KDLFIEVYAEKINKDFEANKLDED 142
+ LF EV A +I +D E ED
Sbjct: 87 EKLFNEVVAPQIQRDIEEGVFSED 110
>UNIPROTKB|Q8IXM3 [details] [associations]
symbol:MRPL41 "39S ribosomal protein L41, mitochondrial"
species:9606 "Homo sapiens" [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IDA] [GO:0005762
"mitochondrial large ribosomal subunit" evidence=IDA] [GO:0006412
"translation" evidence=IDA] [GO:0030529 "ribonucleoprotein complex"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
GO:GO:0006915 GO:GO:0006412 GO:GO:0007049 GO:GO:0005762
GO:GO:0003735 EMBL:AL365502 CleanEx:HS_MRPL27 InterPro:IPR019189
Pfam:PF09809 HOVERGEN:HBG080323 CTD:64975 eggNOG:NOG264900
HOGENOM:HOG000231555 OrthoDB:EOG4C2HBW EMBL:AY232291 EMBL:BC040035
EMBL:AB051625 IPI:IPI00217553 RefSeq:NP_115866.1 UniGene:Hs.44017
ProteinModelPortal:Q8IXM3 IntAct:Q8IXM3 MINT:MINT-6492237
STRING:Q8IXM3 DMDM:74750734 PaxDb:Q8IXM3 PeptideAtlas:Q8IXM3
PRIDE:Q8IXM3 DNASU:64975 Ensembl:ENST00000371443 GeneID:64975
KEGG:hsa:64975 UCSC:uc004cnh.4 GeneCards:GC09P140445
HGNC:HGNC:14492 HPA:HPA024550 HPA:HPA027160 MIM:611846
neXtProt:NX_Q8IXM3 PharmGKB:PA30973 InParanoid:Q8IXM3 OMA:GPRTFYK
PhylomeDB:Q8IXM3 GenomeRNAi:64975 NextBio:67156 Bgee:Q8IXM3
CleanEx:HS_MRPL41 Genevestigator:Q8IXM3 Uniprot:Q8IXM3
Length = 137
Score = 138 (53.6 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 28/60 (46%), Positives = 34/60 (56%)
Query: 83 VVETIPELIVPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINKDFEANKLDED 142
+ E +PE +VP+L GF LKPYVSY E + TA LF E A I KDF+ D D
Sbjct: 53 IKEMVPEFVVPDLTGFKLKPYVSYLAPESEETPLTAAQLFSEAVAPAIEKDFKDGTFDPD 112
>UNIPROTKB|E2R2N8 [details] [associations]
symbol:MRPL41 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005762 "mitochondrial large ribosomal subunit" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
GO:GO:0006412 GO:GO:0005762 GO:GO:0003735 InterPro:IPR019189
Pfam:PF09809 CTD:64975 GeneTree:ENSGT00390000013158 OMA:GPRTFYK
EMBL:AAEX03006723 RefSeq:XP_548346.2 UniGene:Cfa.42268
Ensembl:ENSCAFT00000030846 GeneID:491225 KEGG:cfa:491225
NextBio:20864104 Uniprot:E2R2N8
Length = 135
Score = 136 (52.9 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 31/64 (48%), Positives = 36/64 (56%)
Query: 79 DGRPVV--ETIPELIVPNLEGFNLKPYVSYRTNEIQTPEFTAKDLFIEVYAEKINKDFEA 136
DG+ V+ E +PEL+VP L GF LKPYV+YR TAK LF E A I KDF
Sbjct: 45 DGKFVLVKEMVPELVVPELTGFRLKPYVNYRVPAGTDQPLTAKQLFREAVAPAIEKDFRD 104
Query: 137 NKLD 140
D
Sbjct: 105 GAFD 108
>UNIPROTKB|Q6INF3 [details] [associations]
symbol:mrpl41-b "39S ribosomal protein L41-B,
mitochondrial" species:8355 "Xenopus laevis" [GO:0003735
"structural constituent of ribosome" evidence=ISS] [GO:0005762
"mitochondrial large ribosomal subunit" evidence=ISS] [GO:0006412
"translation" evidence=ISS] [GO:0030529 "ribonucleoprotein complex"
evidence=ISS] GO:GO:0006915 GO:GO:0006412 GO:GO:0007049
GO:GO:0005762 GO:GO:0003735 InterPro:IPR019189 Pfam:PF09809
HOVERGEN:HBG080323 EMBL:BC072329 RefSeq:NP_001085417.1
UniGene:Xl.71511 GeneID:443843 KEGG:xla:443843 CTD:443843
Xenbase:XB-GENE-5760611 Uniprot:Q6INF3
Length = 135
Score = 135 (52.6 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 35/92 (38%), Positives = 48/92 (52%)
Query: 48 RGTQQHRE-EQKLNPDPRFTPTYGVRKV-LQTSDGR--PVVETIPELIVPNLEGFNLKPY 103
RG + E KL P+ + G +K+ TS G+ V E +P +VP+L GF LKPY
Sbjct: 13 RGADRMAECTSKLGPNS-YNKGRGAKKIGYLTSSGKFVKVREMVPVFVVPDLTGFKLKPY 71
Query: 104 VSYRTNEIQTPEFTAKDLFIEVYAEKINKDFE 135
VSY+ TAK LF+E +I KD +
Sbjct: 72 VSYKAPPGTEDPMTAKKLFMETVGPQIEKDLQ 103
>UNIPROTKB|Q6DJI4 [details] [associations]
symbol:mrpl41-a "39S ribosomal protein L41-A,
mitochondrial" species:8355 "Xenopus laevis" [GO:0003735
"structural constituent of ribosome" evidence=ISS] [GO:0005762
"mitochondrial large ribosomal subunit" evidence=ISS] [GO:0006412
"translation" evidence=ISS] [GO:0030529 "ribonucleoprotein complex"
evidence=ISS] GO:GO:0006915 GO:GO:0006412 GO:GO:0007049
GO:GO:0005762 GO:GO:0003735 InterPro:IPR019189 Pfam:PF09809
EMBL:BC075195 RefSeq:NP_001086478.1 UniGene:Xl.6809 GeneID:446312
KEGG:xla:446312 CTD:446312 Xenbase:XB-GENE-6256437
HOVERGEN:HBG080323 Uniprot:Q6DJI4
Length = 135
Score = 126 (49.4 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 33/92 (35%), Positives = 47/92 (51%)
Query: 48 RGTQQHRE-EQKLNPDPRFTPTYGVRKV-LQTSDGR--PVVETIPELIVPNLEGFNLKPY 103
RG + E K P+ + G +K+ T+ G+ V E +P +VP+L GF LKPY
Sbjct: 13 RGADRMAECTSKQGPNS-YNKGRGAKKIGYLTASGKFVKVREMVPVFVVPDLTGFKLKPY 71
Query: 104 VSYRTNEIQTPEFTAKDLFIEVYAEKINKDFE 135
VSY+ TAK LF+E +I KD +
Sbjct: 72 VSYKAPPGTEDPMTAKKLFMETVGPQIEKDLQ 103
>WB|WBGene00015185 [details] [associations]
symbol:mrpl-41 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0006412 GO:GO:0000003
GO:GO:0005762 GO:GO:0003735 InterPro:IPR019189 Pfam:PF09809
EMBL:FO080203 PIR:T25460 RefSeq:NP_493695.1
ProteinModelPortal:P90993 PaxDb:P90993 EnsemblMetazoa:B0432.3.1
EnsemblMetazoa:B0432.3.2 GeneID:173415 KEGG:cel:CELE_B0432.3
UCSC:B0432.3 CTD:173415 WormBase:B0432.3 eggNOG:NOG278653
HOGENOM:HOG000018210 InParanoid:P90993 OMA:FPELSPK NextBio:879553
Uniprot:P90993
Length = 180
Score = 124 (48.7 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 37/100 (37%), Positives = 54/100 (54%)
Query: 39 NFRKFNWI--NRGTQQHREE-QKLNPDP--RFTPTY--GVRKVLQTSDGRPVVETIPELI 91
N+ KF W NR + + QKLNP R+T G +T + PV E EL+
Sbjct: 40 NYEKFKWPGQNREFPELSPKFQKLNPKELHRYTGVQADGFHDE-KTGEFVPVKEMRSELV 98
Query: 92 VPNLEGFNLKPYVSYRTN-EIQTPEFTAKDLFIEVYAEKI 130
VPNL+GF L+PYVSYRT+ +I+ + +E +E++
Sbjct: 99 VPNLDGFKLRPYVSYRTDVQIEKRRVAYEKKVLEKGSERL 138
>UNIPROTKB|P90993 [details] [associations]
symbol:mrpl-41 "39S ribosomal protein L41, mitochondrial"
species:6239 "Caenorhabditis elegans" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0030529
"ribonucleoprotein complex" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0005762 "mitochondrial large ribosomal subunit"
evidence=ISS] GO:GO:0009792 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 GO:GO:0006412 GO:GO:0000003 GO:GO:0005762
GO:GO:0003735 InterPro:IPR019189 Pfam:PF09809 EMBL:FO080203
PIR:T25460 RefSeq:NP_493695.1 ProteinModelPortal:P90993
PaxDb:P90993 EnsemblMetazoa:B0432.3.1 EnsemblMetazoa:B0432.3.2
GeneID:173415 KEGG:cel:CELE_B0432.3 UCSC:B0432.3 CTD:173415
WormBase:B0432.3 eggNOG:NOG278653 HOGENOM:HOG000018210
InParanoid:P90993 OMA:FPELSPK NextBio:879553 Uniprot:P90993
Length = 180
Score = 124 (48.7 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 37/100 (37%), Positives = 54/100 (54%)
Query: 39 NFRKFNWI--NRGTQQHREE-QKLNPDP--RFTPTY--GVRKVLQTSDGRPVVETIPELI 91
N+ KF W NR + + QKLNP R+T G +T + PV E EL+
Sbjct: 40 NYEKFKWPGQNREFPELSPKFQKLNPKELHRYTGVQADGFHDE-KTGEFVPVKEMRSELV 98
Query: 92 VPNLEGFNLKPYVSYRTN-EIQTPEFTAKDLFIEVYAEKI 130
VPNL+GF L+PYVSYRT+ +I+ + +E +E++
Sbjct: 99 VPNLDGFKLRPYVSYRTDVQIEKRRVAYEKKVLEKGSERL 138
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.137 0.395 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 189 176 0.00081 109 3 11 23 0.48 32
31 0.49 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 13
No. of states in DFA: 542 (58 KB)
Total size of DFA: 144 KB (2090 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 20.81u 0.07s 20.88t Elapsed: 00:00:13
Total cpu time: 20.81u 0.08s 20.89t Elapsed: 00:00:13
Start: Thu Aug 15 11:33:20 2013 End: Thu Aug 15 11:33:33 2013