BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3290
(147 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9BZ23|PANK2_HUMAN Pantothenate kinase 2, mitochondrial OS=Homo sapiens GN=PANK2 PE=1
SV=3
Length = 570
Score = 124 bits (311), Expect = 2e-28, Method: Composition-based stats.
Identities = 76/176 (43%), Positives = 101/176 (57%), Gaps = 33/176 (18%)
Query: 2 PWFGMDIGGTLSKLVYFEPKDITPDEANSEIETLKNIRKYLTKNKAYGSTGHRDTHLQVL 61
PWFG+DIGGTL KLVYFEPKDIT +E E+E+LK+IRKYLT N AYGSTG RD HL++
Sbjct: 212 PWFGLDIGGTLVKLVYFEPKDITAEEEEEEVESLKSIRKYLTSNVAYGSTGIRDVHLELK 271
Query: 62 YTTL-----TLLCIELISDDTVVDFIRV-----IMRIQEV-------------------N 92
TL L I + D FI++ + V +
Sbjct: 272 DLTLCGRKGNLHFIRFPTHDMPA-FIQMGRDKNFSSLHTVFCATGGGAYKFEQDFLTIGD 330
Query: 93 MKLEKCDELDCLIRGMLFIEA---NYPLECYYWANSTVEDKCTKVQYDFTNPYPFI 145
++L K DELDCLI+G+L+I++ N +CYY+ N +KC K+ +D NPYP +
Sbjct: 331 LQLCKLDELDCLIKGILYIDSVGFNGRSQCYYFENPADSEKCQKLPFDLKNPYPLL 386
>sp|Q8K4K6|PANK1_MOUSE Pantothenate kinase 1 OS=Mus musculus GN=Pank1 PE=1 SV=1
Length = 548
Score = 122 bits (307), Expect = 5e-28, Method: Composition-based stats.
Identities = 73/175 (41%), Positives = 97/175 (55%), Gaps = 31/175 (17%)
Query: 2 PWFGMDIGGTLSKLVYFEPKDITPDEANSEIETLKNIRKYLTKNKAYGSTGHRDTHLQVL 61
PWFGMDIGGTL KLVYFEPKDIT +E E+E LK+IRKYLT N AYG TG RD HL++
Sbjct: 187 PWFGMDIGGTLVKLVYFEPKDITAEEEQEEVENLKSIRKYLTSNTAYGKTGIRDVHLELK 246
Query: 62 YTTL----------------TLLCIELISDDTVVDFIRVI-------MRIQE-----VNM 93
T+ L I++ S+ + + +E ++
Sbjct: 247 NLTMCGRKGNLHFIRFPTCAMHLFIQMGSEKNFSSLHTTLCATGGGAFKFEEDFRMIADL 306
Query: 94 KLEKCDELDCLIRGMLFIEA---NYPLECYYWANSTVEDKCTKVQYDFTNPYPFI 145
+L K DELDCLI+G+L++++ N ECYY+ N T + C K Y NPYP +
Sbjct: 307 QLHKLDELDCLIQGLLYVDSVGFNGKPECYYFENPTNPELCQKKPYCLDNPYPML 361
>sp|Q8R2W9|PANK3_MOUSE Pantothenate kinase 3 OS=Mus musculus GN=Pank3 PE=2 SV=1
Length = 370
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/177 (42%), Positives = 103/177 (58%), Gaps = 33/177 (18%)
Query: 1 MPWFGMDIGGTLSKLVYFEPKDITPDEANSEIETLKNIRKYLTKNKAYGSTGHRDTHLQV 60
PWFGMDIGGTL KL YFEP DIT +E E+E+LK+IRKYLT N AYGSTG RD HL++
Sbjct: 11 FPWFGMDIGGTLVKLSYFEPIDITAEEEQEEVESLKSIRKYLTSNVAYGSTGIRDVHLEL 70
Query: 61 LYTTL-----TLLCIELISDDTVVDFIRV-----IMRIQEV------------------- 91
TL L I + D + FI++ +Q V
Sbjct: 71 KDLTLFGRRGNLHFIRFPTQD-LPTFIQMGRDKNFSTLQTVLSATGGGAYKFEKDFRTIG 129
Query: 92 NMKLEKCDELDCLIRGMLFIEA---NYPLECYYWANSTVEDKCTKVQYDFTNPYPFI 145
N+ L K DELDCL++G+L+I++ N ECYY+AN++ ++C K+ ++ +PYP +
Sbjct: 130 NLHLHKLDELDCLVKGLLYIDSVSFNGQAECYYFANASEPERCQKMPFNLDDPYPLL 186
>sp|Q9H999|PANK3_HUMAN Pantothenate kinase 3 OS=Homo sapiens GN=PANK3 PE=1 SV=1
Length = 370
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/177 (42%), Positives = 103/177 (58%), Gaps = 33/177 (18%)
Query: 1 MPWFGMDIGGTLSKLVYFEPKDITPDEANSEIETLKNIRKYLTKNKAYGSTGHRDTHLQV 60
PWFGMDIGGTL KL YFEP DIT +E E+E+LK+IRKYLT N AYGSTG RD HL++
Sbjct: 11 FPWFGMDIGGTLVKLSYFEPIDITAEEEQEEVESLKSIRKYLTSNVAYGSTGIRDVHLEL 70
Query: 61 LYTTL-----TLLCIELISDDTVVDFIRV-----IMRIQEV------------------- 91
TL L I + D + FI++ +Q V
Sbjct: 71 KDLTLFGRRGNLHFIRFPTQD-LPTFIQMGRDKNFSTLQTVLCATGGGAYKFEKDFRTIG 129
Query: 92 NMKLEKCDELDCLIRGMLFIEA---NYPLECYYWANSTVEDKCTKVQYDFTNPYPFI 145
N+ L K DELDCL++G+L+I++ N ECYY+AN++ ++C K+ ++ +PYP +
Sbjct: 130 NLHLHKLDELDCLVKGLLYIDSVSFNGQAECYYFANASEPERCQKMPFNLDDPYPLL 186
>sp|Q8TE04|PANK1_HUMAN Pantothenate kinase 1 OS=Homo sapiens GN=PANK1 PE=1 SV=2
Length = 598
Score = 120 bits (302), Expect = 2e-27, Method: Composition-based stats.
Identities = 74/180 (41%), Positives = 94/180 (52%), Gaps = 41/180 (22%)
Query: 2 PWFGMDIGGTLSKLVYFEPKDITPDEANSEIETLKNIRKYLTKNKAYGSTGHRDTHLQVL 61
PWFGMDIGGTL KLVYFEPKDIT +E E+E LK+IRKYLT N AYG TG RD HL++
Sbjct: 237 PWFGMDIGGTLVKLVYFEPKDITAEEEQEEVENLKSIRKYLTSNTAYGKTGIRDVHLELK 296
Query: 62 YTTL---------------------------------TLLCIELISDDTVVDFIRVIMRI 88
T+ T LC + R+I
Sbjct: 297 NLTMCGRKGNLHFIRFPSCAMHRFIQMGSEKNFSSLHTTLCATGGGAFKFEEDFRMI--- 353
Query: 89 QEVNMKLEKCDELDCLIRGMLFIEA---NYPLECYYWANSTVEDKCTKVQYDFTNPYPFI 145
+++L K DELDCLI+G+L++++ N ECYY+ N T + C K Y NPYP +
Sbjct: 354 --ADLQLHKLDELDCLIQGLLYVDSVGFNGKPECYYFENPTNPELCQKKPYCLDNPYPML 411
>sp|Q08DA5|PANK3_BOVIN Pantothenate kinase 3 OS=Bos taurus GN=PANK3 PE=2 SV=1
Length = 370
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 98/178 (55%), Gaps = 35/178 (19%)
Query: 1 MPWFGMDIGGTLSKLVYFEPKDITPDEANSEIETLKNIRKYLTKNKAYGSTGHRDTHLQV 60
PWFGMDIGGTL KL YFEP DIT +E E+E+LK+IRKYLT N AYGSTG RD HL++
Sbjct: 11 FPWFGMDIGGTLVKLSYFEPIDITAEEEQEEVESLKSIRKYLTSNVAYGSTGIRDVHLEL 70
Query: 61 LYTTL------------------------------TLLCIELISDDTVVDFIRVIMRIQE 90
TL TL + + F + I
Sbjct: 71 KDLTLFGRRGNLHFIRFPTQDLPTFIQMGRDKNFSTLHTVLCATGGGAYKFEKDFRTIG- 129
Query: 91 VNMKLEKCDELDCLIRGMLFIEA---NYPLECYYWANSTVEDKCTKVQYDFTNPYPFI 145
N+ L K DELDCL++G+L+I++ N ECYY+AN++ ++C K+ ++ +PYP +
Sbjct: 130 -NLHLHKLDELDCLVKGLLYIDSVSFNGQAECYYFANASEPERCQKMPFNLDDPYPLL 186
>sp|Q80YV4|PANK4_MOUSE Pantothenate kinase 4 OS=Mus musculus GN=Pank4 PE=1 SV=2
Length = 820
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 40/170 (23%), Positives = 66/170 (38%), Gaps = 44/170 (25%)
Query: 4 FGMDIGGTLSKLVYFEP---------------KDITPD-EANSEIETLKNIRKYLTKNKA 47
F +DIGG+L+KL Y+ KD+ D E EI + I L
Sbjct: 37 FAIDIGGSLTKLAYYSTVQHKVAKVRSFDHPGKDVEQDHEPPYEISVQEEITARL----- 91
Query: 48 YGSTGHRDTHLQVLYTTLTLLCIELISDDTVVDFIRVIMRI------------QEVNMKL 95
H T C++ I D V +VI +++ +K+
Sbjct: 92 ---------HFIKFENTYMEACLDFIRDHLVNTETKVIQATGGGAYKFKDLIEEKLRLKV 142
Query: 96 EKCDELDCLIRGMLFIEANYPLECYYWANSTVEDKCTKVQYDFTNPYPFI 145
+K D + CLI+G F+ N P E + + + D + Q + N +P++
Sbjct: 143 DKEDVMTCLIKGCNFVLKNIPHEAFMYQKDS--DPEFRFQTNHPNIFPYL 190
>sp|Q641A2|EFR3A_XENLA Protein EFR3 homolog A OS=Xenopus laevis GN=efr3a PE=2 SV=1
Length = 819
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 56/107 (52%), Gaps = 14/107 (13%)
Query: 23 ITPDEANSEIETLKNIRKYLTKNKAYGSTGHRDTHL------------QVLYTTLTLLCI 70
I PD A+ +I+ K ++ + K +G +R +L ++LYTTL L+ I
Sbjct: 501 IIPDVADLKIKREKISKQDVNFMKKHGQQLYRHIYLGCKEDDNVHKNYELLYTTLALVTI 560
Query: 71 ELISDDTVVDFIRVIMRIQEVNMKLEKCDEL--DCLIRGMLFIEANY 115
EL +++ V+D IRV + +Q++ + E ++ C I GM+ N+
Sbjct: 561 ELANEEVVIDLIRVAIALQDIAITNEDNLQMFNRCGIMGMVAAYLNF 607
>sp|Q923S8|PANK4_RAT Pantothenate kinase 4 OS=Rattus norvegicus GN=Pank4 PE=1 SV=1
Length = 773
Score = 40.8 bits (94), Expect = 0.003, Method: Composition-based stats.
Identities = 40/170 (23%), Positives = 65/170 (38%), Gaps = 44/170 (25%)
Query: 4 FGMDIGGTLSKLVYFEP---------------KDITPD-EANSEIETLKNIRKYLTKNKA 47
F +DIGG+L+KL Y+ KD D E EI + I L
Sbjct: 37 FAIDIGGSLTKLAYYSTVQHKVAKVRSFDHPGKDAEQDHEPPYEISVQEEITARL----- 91
Query: 48 YGSTGHRDTHLQVLYTTLTLLCIELISDDTVVDFIRVIMRI------------QEVNMKL 95
H T C++ I D V +VI +++ +K+
Sbjct: 92 ---------HFIKFENTYMEACLDFIRDHLVNTETKVIQATGGGAYKFKDLIEEKLRLKV 142
Query: 96 EKCDELDCLIRGMLFIEANYPLECYYWANSTVEDKCTKVQYDFTNPYPFI 145
+K D + CLI+G F+ N P E + + + D + Q + N +P++
Sbjct: 143 DKEDVMTCLIKGCNFVLKNIPHEAFMYQKDS--DPEFRFQTNHPNIFPYL 190
>sp|Q4R4U1|PANK4_MACFA Pantothenate kinase 4 OS=Macaca fascicularis GN=PANK4 PE=2 SV=2
Length = 773
Score = 39.7 bits (91), Expect = 0.006, Method: Composition-based stats.
Identities = 41/171 (23%), Positives = 64/171 (37%), Gaps = 48/171 (28%)
Query: 4 FGMDIGGTLSKLVYFEP---------------KDITPD-EANSEIETLKNIRKYLTKNKA 47
F +DIGG+L+KL Y+ KD D E EI + I L
Sbjct: 37 FAIDIGGSLTKLAYYSTVQHKVAKVRSFDHSGKDTERDHEPPYEISVQEEITARL----- 91
Query: 48 YGSTGHRDTHLQVLYTTLTLLCIELISDDTVVDFIRVIMRI------------QEVNMKL 95
H T C++ I D V +VI +++ +K+
Sbjct: 92 ---------HFVKFENTYIEACLDFIKDHLVNTETKVIQATGGGAYKFKDLIEEKLRLKV 142
Query: 96 EKCDELDCLIRGMLFIEANYPLECYYWANSTVEDKCTKVQYDFTNPYPFIY 146
+K D + CLI+G F+ N P E + V K + ++ F +P I+
Sbjct: 143 DKEDVMTCLIKGCNFVLKNIPHEAF------VYQKDSDPEFRFQTNHPHIF 187
>sp|Q5R5F8|PANK4_PONAB Pantothenate kinase 4 OS=Pongo abelii GN=PANK4 PE=2 SV=1
Length = 773
Score = 39.7 bits (91), Expect = 0.007, Method: Composition-based stats.
Identities = 41/171 (23%), Positives = 64/171 (37%), Gaps = 48/171 (28%)
Query: 4 FGMDIGGTLSKLVYFEP---------------KDITPD-EANSEIETLKNIRKYLTKNKA 47
F +DIGG+L+KL Y+ KD D E EI + I L
Sbjct: 37 FAIDIGGSLTKLAYYSTVQHKVAKVRSFDHSGKDTERDHEPPYEISVQEEITARL----- 91
Query: 48 YGSTGHRDTHLQVLYTTLTLLCIELISDDTVVDFIRVIMRI------------QEVNMKL 95
H T C++ I D V +VI +++ +K+
Sbjct: 92 ---------HFIKFENTYIEACLDFIKDHLVNTETKVIQATGGGAYKFKDLIEEKLRLKV 142
Query: 96 EKCDELDCLIRGMLFIEANYPLECYYWANSTVEDKCTKVQYDFTNPYPFIY 146
+K D + CLI+G F+ N P E + V K + ++ F +P I+
Sbjct: 143 DKEDVMTCLIKGCNFVLKNIPHEAF------VYQKDSDPEFRFQTNHPHIF 187
>sp|Q9NVE7|PANK4_HUMAN Pantothenate kinase 4 OS=Homo sapiens GN=PANK4 PE=1 SV=1
Length = 773
Score = 38.5 bits (88), Expect = 0.014, Method: Composition-based stats.
Identities = 36/159 (22%), Positives = 64/159 (40%), Gaps = 24/159 (15%)
Query: 4 FGMDIGGTLSKLVYFEPKDITPDEANSEIETLKNIRKYLTKNKAYGSTGHRDT----HLQ 59
F +DIGG+L+KL Y+ + S + K+ + Y + + H
Sbjct: 37 FAIDIGGSLTKLAYYSTVQHKVAKVRSFDHSGKDTER--EHEPPYEISVQEEITARLHFI 94
Query: 60 VLYTTLTLLCIELISDDTVVDFIRVIMRI------------QEVNMKLEKCDELDCLIRG 107
T C++ I D V +VI +++ +K++K D + CLI+G
Sbjct: 95 KFENTYIEACLDFIKDHLVNTETKVIQATGGGAYKFKDLIEEKLRLKVDKEDVMTCLIKG 154
Query: 108 MLFIEANYPLECYYWANSTVEDKCTKVQYDFTNPYPFIY 146
F+ N P E + V K + ++ F +P I+
Sbjct: 155 CNFVLKNIPHEAF------VYQKDSDPEFRFQTNHPHIF 187
>sp|Q8BG67|EFR3A_MOUSE Protein EFR3 homolog A OS=Mus musculus GN=Efr3a PE=1 SV=1
Length = 819
Score = 38.5 bits (88), Expect = 0.015, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 12/80 (15%)
Query: 23 ITPDEANSEIETLKNIRKYLTKNKAYGSTGHRDTHL------------QVLYTTLTLLCI 70
I PD A+ +I+ K R+ + K G +R +L ++LYT+L L+ I
Sbjct: 499 IIPDVADLKIKREKICRQDTSFMKKNGQQLYRHIYLGCKEEDNVQKNYELLYTSLALITI 558
Query: 71 ELISDDTVVDFIRVIMRIQE 90
EL +++ V+D IR+ + +Q+
Sbjct: 559 ELANEEVVIDLIRLAIALQD 578
>sp|Q14156|EFR3A_HUMAN Protein EFR3 homolog A OS=Homo sapiens GN=EFR3A PE=1 SV=2
Length = 821
Score = 38.5 bits (88), Expect = 0.015, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 12/80 (15%)
Query: 23 ITPDEANSEIETLKNIRKYLTKNKAYGSTGHRDTHL------------QVLYTTLTLLCI 70
I PD A+ +I+ K R+ + K G +R +L ++LYT+L L+ I
Sbjct: 501 IIPDVADLKIKREKICRQDTSFMKKNGQQLYRHIYLGCKEEDNVQKNYELLYTSLALITI 560
Query: 71 ELISDDTVVDFIRVIMRIQE 90
EL +++ V+D IR+ + +Q+
Sbjct: 561 ELANEEVVIDLIRLAIALQD 580
>sp|Q9Y2G0|EFR3B_HUMAN Protein EFR3 homolog B OS=Homo sapiens GN=EFR3B PE=1 SV=2
Length = 817
Score = 37.7 bits (86), Expect = 0.024, Method: Composition-based stats.
Identities = 15/35 (42%), Positives = 25/35 (71%)
Query: 57 HLQVLYTTLTLLCIELISDDTVVDFIRVIMRIQEV 91
H + LY L L+ IEL +++ VVD IR+++ +Q+V
Sbjct: 542 HYEALYGLLALISIELANEEVVVDLIRLVLAVQDV 576
>sp|Q6ZQ18|EFR3B_MOUSE Protein EFR3 homolog B OS=Mus musculus GN=Efr3b PE=1 SV=2
Length = 817
Score = 37.7 bits (86), Expect = 0.027, Method: Composition-based stats.
Identities = 15/35 (42%), Positives = 25/35 (71%)
Query: 57 HLQVLYTTLTLLCIELISDDTVVDFIRVIMRIQEV 91
H + LY L L+ IEL +++ VVD IR+++ +Q+V
Sbjct: 542 HYEALYGLLALISIELANEEVVVDLIRLVLAVQDV 576
>sp|Q5SPP5|EFR3B_DANRE Protein EFR3 homolog B OS=Danio rerio GN=efr3b PE=3 SV=2
Length = 816
Score = 37.0 bits (84), Expect = 0.046, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 28/41 (68%)
Query: 57 HLQVLYTTLTLLCIELISDDTVVDFIRVIMRIQEVNMKLEK 97
H + LY+ L L+ +EL +++ VVD IRV + +Q++ + E+
Sbjct: 541 HFEKLYSLLALISMELANEEVVVDLIRVALALQDLALSSEE 581
>sp|A3KGB4|TBC8B_MOUSE TBC1 domain family member 8B OS=Mus musculus GN=Tbc1d8b PE=2 SV=1
Length = 1114
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Query: 45 NKAYGSTGHRDTHLQVLYTTLTLLCIELISDDTVVDFIRVIMRIQEVNMKLEKCDELDCL 104
N+ YGS + D H + L I+ + + T + +RV+ Q+V M L++ DEL +
Sbjct: 749 NEKYGSIRYEDIH--SMRCRNRLYVIQTLEETTKQNVLRVVS--QDVKMSLQELDELYVI 804
Query: 105 IRGMLFIEANYPLEC 119
+ LFI + L C
Sbjct: 805 FKKELFISCYWYLSC 819
>sp|A0M672|UVRC_GRAFK UvrABC system protein C OS=Gramella forsetii (strain KT0803)
GN=uvrC PE=3 SV=1
Length = 597
Score = 34.3 bits (77), Expect = 0.24, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 18 FEPKDITPDEANSEIETLKNIRKYLTKNKAYGSTGHRDTHLQVLYTTLTLLCIELISDDT 77
F P+D P + + ETLK I++ + +G T HR+ + T L I+ I + T
Sbjct: 498 FYPEDSIPLYLDKKSETLKIIQQLRNEAHRFGITFHRNKRSKTALNT-ELESIQGIGEKT 556
Query: 78 VVDFI---RVIMRIQEVNMK 94
VV+ + R + RI+E + K
Sbjct: 557 VVELLTHFRSLKRIKEASQK 576
>sp|O14400|GPDM_SCHPO Glycerol-3-phosphate dehydrogenase, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=gut2 PE=3 SV=1
Length = 649
Score = 30.4 bits (67), Expect = 3.7, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 1 MPWFGMDIGGTLSKLVYFEPKDITPDEANSEIETLKNIRKYL 42
+PW G I GT K + P + TP E + ++ LK ++KYL
Sbjct: 346 LPWQGKVIAGTTDKPLSSVPTNPTPSEDDIQL-ILKELQKYL 386
>sp|Q9PLE1|SYK_CHLMU Lysine--tRNA ligase OS=Chlamydia muridarum (strain MoPn / Nigg)
GN=lysS PE=3 SV=1
Length = 524
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Query: 28 ANSEIETLKNIRKYLTKNKAYGSTGH----RDTHLQVLYTTLTLLCIELIS 74
A+SEI ++K I K L G G+ L VL T+TLLC LIS
Sbjct: 110 ADSEISSIKFIEKKLDLGDILGIDGYLFFTHSGELTVLVETVTLLCKSLIS 160
>sp|Q0IIM8|TBC8B_HUMAN TBC1 domain family member 8B OS=Homo sapiens GN=TBC1D8B PE=1 SV=2
Length = 1120
Score = 30.0 bits (66), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Query: 45 NKAYGSTGHRDTHLQVLYTTLTLLCIELISDDTVVDFIRVIMRIQEVNMKLEKCDELDCL 104
N+ YG+ + D H + L I+ + + T + +RV+ Q+V + L++ DEL +
Sbjct: 750 NEKYGNIRYEDIH--SMRCRNRLYVIQTLEETTKQNVLRVVS--QDVKLSLQELDELYVI 805
Query: 105 IRGMLFIEANYPLEC 119
+ LF+ + L C
Sbjct: 806 FKKELFLSCYWCLGC 820
>sp|A1CBC9|DCL1_ASPCL Dicer-like protein 1 OS=Aspergillus clavatus (strain ATCC 1007 / CBS
513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=dcl1 PE=3 SV=2
Length = 1534
Score = 30.0 bits (66), Expect = 5.3, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 77 TVVDFIRVIMRIQEVNMKLEKCDELDCLIRGMLFIEA 113
T + F +I R+ + +E CDELD +IR +EA
Sbjct: 1024 TCLAFPAIITRLDSYLISIEACDELDLVIRSDYALEA 1060
>sp|P25019|6B2_AGRVI Protein 6b OS=Agrobacterium vitis GN=6b PE=4 SV=1
Length = 207
Score = 29.6 bits (65), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 7 DIGGTLSKLVYFEPKDITPDEANSE 31
D G L+++VYF P TP+E + E
Sbjct: 30 DFGALLAEIVYFHPPGATPEEGDDE 54
>sp|P0AA47|PLAP_ECOLI Low-affinity putrescine importer PlaP OS=Escherichia coli (strain
K12) GN=plaP PE=1 SV=1
Length = 452
Score = 29.3 bits (64), Expect = 8.5, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
Query: 55 DTHLQVLYTTLTLLCIELISDDTVVDFIRVIMRIQEVNMKLEKCDELDCLIRGMLFIEAN 114
D H+ + T T+LC D + + + V + + L LI GM+FI A
Sbjct: 197 DAHVIPMITGATILCFSFTGFDGISNLSEETKDAERV---IPRAIFLTALIGGMIFIFAT 253
Query: 115 YPLECYY 121
Y L+ Y+
Sbjct: 254 YFLQLYF 260
>sp|P0AA48|PLAP_ECO57 Low-affinity putrescine importer PlaP OS=Escherichia coli O157:H7
GN=plaP PE=3 SV=1
Length = 452
Score = 29.3 bits (64), Expect = 8.5, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
Query: 55 DTHLQVLYTTLTLLCIELISDDTVVDFIRVIMRIQEVNMKLEKCDELDCLIRGMLFIEAN 114
D H+ + T T+LC D + + + V + + L LI GM+FI A
Sbjct: 197 DAHVIPMITGATILCFSFTGFDGISNLSEETKDAERV---IPRAIFLTALIGGMIFIFAT 253
Query: 115 YPLECYY 121
Y L+ Y+
Sbjct: 254 YFLQLYF 260
>sp|Q9TU34|ITPR1_BOVIN Inositol 1,4,5-trisphosphate receptor type 1 OS=Bos taurus GN=ITPR1
PE=1 SV=1
Length = 2709
Score = 29.3 bits (64), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 25/44 (56%)
Query: 9 GGTLSKLVYFEPKDITPDEANSEIETLKNIRKYLTKNKAYGSTG 52
GG + KL+ + + +E I+ L+ +R+ +TK++ YG G
Sbjct: 1649 GGFICKLIKHTKQLLEENEEKLCIKVLQTLREMMTKDRGYGEKG 1692
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.140 0.432
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,132,467
Number of Sequences: 539616
Number of extensions: 1982653
Number of successful extensions: 4537
Number of sequences better than 100.0: 35
Number of HSP's better than 100.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 4499
Number of HSP's gapped (non-prelim): 41
length of query: 147
length of database: 191,569,459
effective HSP length: 106
effective length of query: 41
effective length of database: 134,370,163
effective search space: 5509176683
effective search space used: 5509176683
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)