Query psy3290
Match_columns 147
No_of_seqs 151 out of 215
Neff 5.3
Searched_HMMs 29240
Date Fri Aug 16 21:15:14 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3290.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/3290hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2i7n_A Pantothenate kinase 1; 100.0 2E-43 6.9E-48 303.0 10.7 145 1-146 3-179 (360)
2 2ews_A Pantothenate kinase; PA 99.4 4.6E-13 1.6E-17 111.4 9.2 71 1-116 20-106 (287)
3 4ehu_A Activator of 2-hydroxyi 84.8 0.51 1.8E-05 36.8 2.7 20 1-20 1-20 (276)
4 1hux_A Activator of (R)-2-hydr 83.3 0.73 2.5E-05 36.6 3.0 19 2-20 4-22 (270)
5 3bex_A Type III pantothenate k 81.1 0.91 3.1E-05 36.1 2.8 19 2-20 4-22 (249)
6 3djc_A Type III pantothenate k 78.6 1.3 4.5E-05 35.8 3.0 18 3-20 4-21 (266)
7 1zbs_A Hypothetical protein PG 78.1 1.1 3.8E-05 35.5 2.4 17 3-19 2-18 (291)
8 1zxo_A Conserved hypothetical 75.6 0.96 3.3E-05 35.8 1.4 17 3-19 2-18 (291)
9 3lm2_A Putative kinase; struct 71.9 2 6.8E-05 33.7 2.4 24 87-110 87-110 (226)
10 2gup_A ROK family protein; sug 67.9 2.8 9.5E-05 32.8 2.4 24 86-110 90-113 (292)
11 2yhx_A Hexokinase B; transfera 67.4 3.3 0.00011 35.9 3.0 18 3-20 63-80 (457)
12 2w40_A Glycerol kinase, putati 67.0 3.5 0.00012 35.3 3.0 18 3-20 6-23 (503)
13 2h3g_X Biosynthetic protein; p 66.6 3.7 0.00013 33.0 3.0 18 3-20 2-19 (268)
14 1zc6_A Probable N-acetylglucos 66.5 3.5 0.00012 32.6 2.8 18 3-20 13-30 (305)
15 2aa4_A Mannac kinase, putative 62.5 4.5 0.00015 31.5 2.6 27 86-112 91-117 (289)
16 2e2o_A Hexokinase; acetate and 62.4 4.9 0.00017 31.4 2.9 19 2-20 3-21 (299)
17 2dpn_A Glycerol kinase; thermu 62.1 4.8 0.00016 34.4 2.9 18 3-20 4-21 (495)
18 2itm_A Xylulose kinase, xylulo 61.5 4.9 0.00017 34.1 2.9 18 3-20 2-19 (484)
19 1sz2_A Glucokinase, glucose ki 60.3 5.2 0.00018 32.1 2.7 26 86-111 96-122 (332)
20 2ch5_A NAGK protein; transfera 60.2 4.6 0.00016 32.2 2.4 22 86-107 93-117 (347)
21 2nrh_A Transcriptional activat 60.2 4.3 0.00015 31.9 2.1 14 1-14 1-14 (219)
22 3i33_A Heat shock-related 70 k 58.9 6.6 0.00023 31.9 3.2 20 1-20 23-42 (404)
23 1saz_A Probable butyrate kinas 58.8 6.8 0.00023 32.5 3.3 17 3-19 4-20 (381)
24 3ll3_A Gluconate kinase; xylul 58.8 6.2 0.00021 33.9 3.1 18 3-20 6-23 (504)
25 3qfu_A 78 kDa glucose-regulate 58.7 7 0.00024 31.5 3.3 19 2-20 19-37 (394)
26 2uyt_A Rhamnulokinase; rhamnos 58.1 6.3 0.00021 33.4 3.0 18 3-20 6-23 (489)
27 3vov_A Glucokinase, hexokinase 58.0 5.9 0.0002 31.5 2.6 27 86-112 93-119 (302)
28 3epq_A Putative fructokinase; 57.9 5.3 0.00018 32.0 2.4 27 86-112 92-118 (302)
29 1v8d_A Hypothetical protein (T 57.6 3.5 0.00012 33.2 1.2 12 3-14 168-179 (235)
30 2zf5_O Glycerol kinase; hypert 57.2 6.6 0.00023 33.5 3.0 18 3-20 5-22 (497)
31 4htl_A Beta-glucoside kinase; 56.3 6.5 0.00022 31.1 2.6 27 86-112 92-118 (297)
32 1woq_A Inorganic polyphosphate 55.5 7 0.00024 30.3 2.6 27 86-112 109-135 (267)
33 3o8m_A Hexokinase; rnaseh-like 53.3 8.2 0.00028 33.8 3.0 20 3-22 82-101 (485)
34 3vgl_A Glucokinase; ROK family 53.1 8.8 0.0003 30.6 2.9 27 86-112 91-117 (321)
35 3ifr_A Carbohydrate kinase, FG 53.0 8.9 0.0003 33.0 3.1 18 3-20 9-26 (508)
36 2d4w_A Glycerol kinase; alpha 52.4 8.6 0.00029 32.9 2.9 18 3-20 4-21 (504)
37 1bdg_A Hexokinase; phosphotran 51.8 8.2 0.00028 33.2 2.7 20 3-22 70-89 (451)
38 2q2r_A Glucokinase 1, putative 51.8 7.5 0.00026 31.7 2.4 22 87-108 123-145 (373)
39 1cza_N Hexokinase type I; stru 50.9 8.1 0.00028 36.2 2.7 18 3-20 80-97 (917)
40 3h3n_X Glycerol kinase; ATP-bi 50.3 10 0.00035 32.5 3.1 18 3-20 7-24 (506)
41 3g25_A Glycerol kinase; IDP007 49.7 10 0.00034 32.5 2.9 18 3-20 8-25 (501)
42 4e1j_A Glycerol kinase; struct 49.7 10 0.00034 32.8 2.9 18 3-20 28-45 (520)
43 4db3_A Glcnac kinase, N-acetyl 49.5 8.7 0.0003 30.8 2.4 27 86-112 115-141 (327)
44 2yhw_A Bifunctional UDP-N-acet 49.0 9 0.00031 30.7 2.4 26 86-111 126-151 (343)
45 3htv_A D-allose kinase, alloki 49.0 9 0.00031 30.6 2.4 22 86-107 102-123 (310)
46 2p3r_A Glycerol kinase; glycer 48.6 11 0.00037 32.4 3.0 18 3-20 5-22 (510)
47 2qm1_A Glucokinase; alpha-beta 47.8 12 0.00039 29.4 2.8 26 86-111 103-128 (326)
48 3h6e_A Carbohydrate kinase, FG 47.3 12 0.0004 32.3 3.0 18 3-20 8-25 (482)
49 4gni_A Putative heat shock pro 46.6 13 0.00045 30.3 3.1 17 2-18 14-30 (409)
50 3l0q_A Xylulose kinase; xlylul 46.2 13 0.00044 32.2 3.1 18 3-20 7-24 (554)
51 3h1q_A Ethanolamine utilizatio 45.9 10 0.00036 28.9 2.2 18 3-20 30-47 (272)
52 2ap1_A Putative regulator prot 45.4 11 0.00038 29.8 2.4 26 86-111 115-140 (327)
53 3r8e_A Hypothetical sugar kina 44.6 11 0.00038 30.0 2.2 27 86-112 112-139 (321)
54 3i8b_A Xylulose kinase; strain 44.3 14 0.00047 32.0 3.0 17 3-19 7-23 (515)
55 3hz6_A Xylulokinase; xylulose, 43.4 14 0.00049 31.7 2.9 18 3-20 7-24 (511)
56 2ych_A Competence protein PILM 43.2 16 0.00056 29.2 3.1 17 3-19 15-31 (377)
57 3jvp_A Ribulokinase; PSI-II, N 40.4 17 0.00059 31.7 3.0 18 3-20 7-24 (572)
58 1dkg_D Molecular chaperone DNA 37.2 19 0.00066 28.9 2.6 19 2-20 3-21 (383)
59 1jce_A ROD shape-determining p 35.5 22 0.00077 28.1 2.7 16 2-17 4-19 (344)
60 1z6r_A MLC protein; transcript 35.1 21 0.00072 29.2 2.6 27 86-112 181-207 (406)
61 2hoe_A N-acetylglucosamine kin 34.1 25 0.00084 28.7 2.8 27 86-112 183-209 (380)
62 2zgy_A Plasmid segregation pro 33.7 24 0.00082 27.9 2.6 16 3-18 2-17 (320)
63 2h7g_X DNA topoisomerase 1; ty 32.9 35 0.0012 28.4 3.6 30 40-69 135-164 (314)
64 3vxv_A Methyl-CPG-binding doma 32.6 15 0.00053 23.9 1.1 27 15-48 28-54 (69)
65 1cza_N Hexokinase type I; stru 31.6 25 0.00085 32.9 2.7 19 3-21 528-546 (917)
66 1z05_A Transcriptional regulat 31.4 26 0.00089 29.0 2.6 27 86-112 203-229 (429)
67 3m4a_A Putative type I topoiso 31.2 32 0.0011 29.1 3.1 31 40-70 142-172 (346)
68 3cet_A Conserved archaeal prot 30.2 29 0.001 29.1 2.7 19 3-21 2-20 (334)
69 2v7y_A Chaperone protein DNAK; 30.0 35 0.0012 29.1 3.1 19 2-20 3-21 (509)
70 3mcp_A Glucokinase; structural 29.9 32 0.0011 28.5 2.9 27 86-112 103-129 (366)
71 3ezw_A Glycerol kinase; glycer 28.6 35 0.0012 29.3 3.0 18 3-20 6-23 (526)
72 3hm8_A Hexokinase-3; glucose, 28.5 32 0.0011 29.8 2.7 19 3-21 61-79 (445)
73 4a2a_A Cell division protein F 27.7 28 0.00095 29.3 2.1 20 2-21 9-28 (419)
74 3d2f_A Heat shock protein homo 27.5 37 0.0013 30.5 3.0 20 1-20 2-21 (675)
75 4bc3_A Xylulose kinase; transf 26.5 43 0.0015 28.9 3.1 18 3-20 12-29 (538)
76 3c2i_A Methyl-CPG-binding prot 24.2 26 0.0009 24.5 1.1 28 13-47 44-71 (97)
77 1x9t_B N-terminl peptide of fi 22.1 27 0.00093 18.9 0.6 8 137-144 10-17 (26)
78 2kho_A Heat shock protein 70; 21.5 53 0.0018 28.8 2.8 19 2-20 3-21 (605)
79 4b9q_A Chaperone protein DNAK; 21.4 55 0.0019 28.7 2.9 19 2-20 3-21 (605)
80 2f9w_A Pantothenate kinase; CO 21.1 59 0.002 26.1 2.8 18 3-20 25-42 (271)
81 3zw5_A Glyoxalase domain-conta 20.9 81 0.0028 21.2 3.2 43 55-100 15-58 (147)
82 1k8k_A ARP3, actin-like protei 20.5 62 0.0021 26.4 2.8 17 2-18 6-22 (418)
No 1
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=100.00 E-value=2e-43 Score=303.04 Aligned_cols=145 Identities=51% Similarity=0.865 Sum_probs=119.4
Q ss_pred CCceEEeecCceeEEEEeeeCCCCCCchhhHHHHHHHHHHHhhhcccCCCCCcccccceeecce-----eeEEEEEecch
Q psy3290 1 MPWFGMDIGGTLSKLVYFEPKDITPDEANSEIETLKNIRKYLTKNKAYGSTGHRDTHLQVLYTT-----LTLLCIELISD 75 (147)
Q Consensus 1 ~p~faiDIGGTL~KlVYf~~~~~~~~~~~~e~~~l~~i~~~l~~n~~yg~~g~rd~~le~~~~t-----~~LhFikFeT~ 75 (147)
||||||||||||+|||||+|.+++++++++++++|++|++|+++|.+||++|+||.|+++.+.+ .+|||++|||+
T Consensus 3 ~~~~~iDiGGtL~Klvy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~F~~f~t~ 82 (360)
T 2i7n_A 3 FPWFGMDIGGTLVKLVYFEPKDITAEEEQEEVENLKSIRKYLTSNTAYGKTGIRDVHLELKNLTMCGRKGNLHFIRFPSC 82 (360)
T ss_dssp CCEEEEEECSSEEEEEEEEECC------------CCSHHHHHHHCSBCSSSCEECGGGCEEEEEC--CEEEEEEEEEEGG
T ss_pred CCEEEEEeCCceEEEEEEeecCCccccccccccccccchhhccccccccccCccccccccccccccCcCceEEEEEeehh
Confidence 7999999999999999999998888777778889999999999999999999999999987653 49999999999
Q ss_pred hhHHHHHHHH------------------------HHHHHcCCceeeechhhhhhhhhhhhh---hhCCCceEEeeCCCCc
Q psy3290 76 DTVVDFIRVI------------------------MRIQEVNMKLEKCDELDCLIRGMLFIE---ANYPLECYYWANSTVE 128 (147)
Q Consensus 76 ~~i~~fi~~~------------------------~f~~~lgv~l~k~DEMecLI~Gl~fll---~~i~~E~ft~~~~~~~ 128 (147)
+ |++|++++ .|++++|+++.|+|||+|+++|++|++ +++|+|||||+++.++
T Consensus 83 ~-~~~~l~~~~~~~~~~~~~~i~aTGgGa~k~~~~~~~~~g~~~~k~dE~~c~~~G~~~l~~~~~~~~~e~~t~~~~~~~ 161 (360)
T 2i7n_A 83 A-MHRFIQMGSEKNFSSLHTTLCATGGGAFKFEEDFRMIADLQLHKLDELDCLIQGLLYVDSVGFNGKPECYYFENPTNP 161 (360)
T ss_dssp G-HHHHHHHC------------CEESTTTTGGGTTC-------CCBCCHHHHHHHHHHHHHHHCBTTBCSEEEEESTTCT
T ss_pred h-HHHHHHHHHHcCCCccCcEEEEECCcHHHHHHHHHHHhCCCcceecHHHHHHHHHHHHhcccccCCceeEEecccccc
Confidence 9 99999996 567889999999999999999999999 6899999999999999
Q ss_pred cceeeecCCCCCCccccC
Q psy3290 129 DKCTKVQYDFTNPYPFIY 146 (147)
Q Consensus 129 ~~~~~~~~~~~~~YPyLL 146 (147)
+++++.|++++++|||||
T Consensus 162 ~~~~~~~~~~~~~~Pyll 179 (360)
T 2i7n_A 162 ELCQKKPYCLDNPYPMLL 179 (360)
T ss_dssp TTCEEEEECCSSCCSEEE
T ss_pred ccccccccccccCCceEE
Confidence 999999999999999997
No 2
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=99.42 E-value=4.6e-13 Score=111.42 Aligned_cols=71 Identities=17% Similarity=0.230 Sum_probs=61.8
Q ss_pred CCceEEeecCceeEEEEeeeCCCCCCchhhHHHHHHHHHHHhhhcccCCCCCcccccceeecceeeEEEEEecchhhHHH
Q psy3290 1 MPWFGMDIGGTLSKLVYFEPKDITPDEANSEIETLKNIRKYLTKNKAYGSTGHRDTHLQVLYTTLTLLCIELISDDTVVD 80 (147)
Q Consensus 1 ~p~faiDIGGTL~KlVYf~~~~~~~~~~~~e~~~l~~i~~~l~~n~~yg~~g~rd~~le~~~~t~~LhFikFeT~~~i~~ 80 (147)
+.|+|||||||++|+||++. | +++|.+|++.. +++
T Consensus 20 ~~~iGIDiGsTt~K~V~~~~-------------------------------~-------------~i~~~~~~~~~-~~~ 54 (287)
T 2ews_A 20 HMKVGIDAGGTLIKIVQEQD-------------------------------N-------------QRTFKTELTKN-IDQ 54 (287)
T ss_dssp -CEEEEEECSSEEEEEEECS-------------------------------S-------------CEEEEEEEGGG-HHH
T ss_pred CeEEEEEEChhhEEEEEEcC-------------------------------C-------------EEEEEEechHH-HHH
Confidence 46899999999999999942 1 47788999999 999
Q ss_pred HHHHH----------------HHHHHcCCceeeechhhhhhhhhhhhhhhCC
Q psy3290 81 FIRVI----------------MRIQEVNMKLEKCDELDCLIRGMLFIEANYP 116 (147)
Q Consensus 81 fi~~~----------------~f~~~lgv~l~k~DEMecLI~Gl~fll~~i~ 116 (147)
+++++ .+.+.+|+.+.+.|||+|+++|++|+...++
T Consensus 55 ~l~~l~~~~~~~i~~TG~G~~~~~~~l~~~~~~v~Ei~~~~~Ga~~l~~~~~ 106 (287)
T 2ews_A 55 VVEWLNQQQIEKLCLTGGNAGVIAENINIPAQIFVEFDAASQGLGILLKEQG 106 (287)
T ss_dssp HHHHHHTSCCSEEEEESTTHHHHHTTSSSCCEECCHHHHHHHHHHHHHHHTT
T ss_pred HHHHhcccCceEEEEEChhHHhHhHhhCCCcceeehhHHHHHHHHHhcccCC
Confidence 99887 6677899999999999999999999998754
No 3
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=84.81 E-value=0.51 Score=36.85 Aligned_cols=20 Identities=45% Similarity=0.529 Sum_probs=17.4
Q ss_pred CCceEEeecCceeEEEEeee
Q psy3290 1 MPWFGMDIGGTLSKLVYFEP 20 (147)
Q Consensus 1 ~p~faiDIGGTL~KlVYf~~ 20 (147)
|-.+|||+|+|.+|+|....
T Consensus 1 M~~lGID~GsT~tk~av~d~ 20 (276)
T 4ehu_A 1 MYTMGLDIGSTASKGVILKN 20 (276)
T ss_dssp CEEEEEEECSSCEEEEEEET
T ss_pred CeEEEEEcCccEEEEEEEEC
Confidence 66789999999999998763
No 4
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=83.34 E-value=0.73 Score=36.61 Aligned_cols=19 Identities=32% Similarity=0.517 Sum_probs=16.4
Q ss_pred CceEEeecCceeEEEEeee
Q psy3290 2 PWFGMDIGGTLSKLVYFEP 20 (147)
Q Consensus 2 p~faiDIGGTL~KlVYf~~ 20 (147)
-++|||||||-+|+|-+..
T Consensus 4 ~~lGiD~Gst~~k~~l~d~ 22 (270)
T 1hux_A 4 YTLGIDVGSTASKCIILKD 22 (270)
T ss_dssp EEEEEEECSSEEEEEEEET
T ss_pred EEEEEEeccceEEEEEEeC
Confidence 3689999999999998764
No 5
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=81.09 E-value=0.91 Score=36.10 Aligned_cols=19 Identities=26% Similarity=0.314 Sum_probs=16.8
Q ss_pred CceEEeecCceeEEEEeee
Q psy3290 2 PWFGMDIGGTLSKLVYFEP 20 (147)
Q Consensus 2 p~faiDIGGTL~KlVYf~~ 20 (147)
-++++|||+|-+|+..|+.
T Consensus 4 M~L~IDIGNT~ik~gl~~~ 22 (249)
T 3bex_A 4 MYLLVDVGNTHSVFSITED 22 (249)
T ss_dssp EEEEEEECSSEEEEEEESS
T ss_pred eEEEEEECCCeEEEEEEEC
Confidence 3789999999999999974
No 6
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=78.62 E-value=1.3 Score=35.75 Aligned_cols=18 Identities=17% Similarity=0.196 Sum_probs=16.2
Q ss_pred ceEEeecCceeEEEEeee
Q psy3290 3 WFGMDIGGTLSKLVYFEP 20 (147)
Q Consensus 3 ~faiDIGGTL~KlVYf~~ 20 (147)
.++||||+|-+|+..|+.
T Consensus 4 lL~IDIGNT~iK~gl~d~ 21 (266)
T 3djc_A 4 ILCIDVGNSHIYGGVFDG 21 (266)
T ss_dssp EEEEEECSSEEEEEEEET
T ss_pred EEEEEECCCeEEEEEEEC
Confidence 689999999999999874
No 7
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=78.13 E-value=1.1 Score=35.50 Aligned_cols=17 Identities=18% Similarity=0.042 Sum_probs=14.3
Q ss_pred ceEEeecCceeEEEEee
Q psy3290 3 WFGMDIGGTLSKLVYFE 19 (147)
Q Consensus 3 ~faiDIGGTL~KlVYf~ 19 (147)
.+|||||||-+|.+=+.
T Consensus 2 ~lgiDiGGT~~~~~l~d 18 (291)
T 1zbs_A 2 ILIGDSGSTKTDWCIAK 18 (291)
T ss_dssp EEEEEECSSEEEEEEEE
T ss_pred EEEEEeCccceEEEEEe
Confidence 47999999999977664
No 8
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=75.63 E-value=0.96 Score=35.85 Aligned_cols=17 Identities=18% Similarity=0.057 Sum_probs=13.2
Q ss_pred ceEEeecCceeEEEEee
Q psy3290 3 WFGMDIGGTLSKLVYFE 19 (147)
Q Consensus 3 ~faiDIGGTL~KlVYf~ 19 (147)
.+|||||||-+|.+-+.
T Consensus 2 ~lgiDiGGT~i~~~l~d 18 (291)
T 1zxo_A 2 ILIADSGSTKTDWCVVL 18 (291)
T ss_dssp --CEECCTTCEEEEEEC
T ss_pred EEEEEeccccEEEEEEc
Confidence 47999999999987764
No 9
>3lm2_A Putative kinase; structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2, transf; HET: MSE; 1.70A {Agrobacterium tumefaciens}
Probab=71.90 E-value=2 Score=33.68 Aligned_cols=24 Identities=4% Similarity=-0.151 Sum_probs=18.1
Q ss_pred HHHHcCCceeeechhhhhhhhhhh
Q psy3290 87 RIQEVNMKLEKCDELDCLIRGMLF 110 (147)
Q Consensus 87 f~~~lgv~l~k~DEMecLI~Gl~f 110 (147)
+++++|+.+.-+....|..-|-.+
T Consensus 87 l~~~~~~pv~v~NDanaaalge~~ 110 (226)
T 3lm2_A 87 YEGAFGRPVRIVNDALMQAIGSYN 110 (226)
T ss_dssp HHHHHTSCEEEEEHHHHHHHHHCC
T ss_pred hHHhcCCeEEEEEHHHHHHHHHhh
Confidence 457788888888888888776543
No 10
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=67.87 E-value=2.8 Score=32.79 Aligned_cols=24 Identities=8% Similarity=0.187 Sum_probs=19.9
Q ss_pred HHHHHcCCceeeechhhhhhhhhhh
Q psy3290 86 MRIQEVNMKLEKCDELDCLIRGMLF 110 (147)
Q Consensus 86 ~f~~~lgv~l~k~DEMecLI~Gl~f 110 (147)
.+ +++|+.+.-+....|..-|-.+
T Consensus 90 ~l-~~~~~pv~v~NDa~aaa~~e~~ 113 (292)
T 2gup_A 90 AL-SSYQLPVHLENDANCVGLSELL 113 (292)
T ss_dssp HT-GGGCCCEEEEEHHHHHHHHHHH
T ss_pred HH-HHcCCCEEEechHHHHHHHHHH
Confidence 45 7889999999999998888655
No 11
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=67.35 E-value=3.3 Score=35.86 Aligned_cols=18 Identities=11% Similarity=0.357 Sum_probs=15.6
Q ss_pred ceEEeecCceeEEEEeee
Q psy3290 3 WFGMDIGGTLSKLVYFEP 20 (147)
Q Consensus 3 ~faiDIGGTL~KlVYf~~ 20 (147)
.+|||||||-.|++-+.-
T Consensus 63 ~laiDlGGTnirv~lV~~ 80 (457)
T 2yhx_A 63 FLAIVMGGGDLEVILISL 80 (457)
T ss_dssp EEEEEECSSEEEEEEEEE
T ss_pred EEEEEeCCCeEEEEEEEe
Confidence 489999999999888764
No 12
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=66.96 E-value=3.5 Score=35.30 Aligned_cols=18 Identities=11% Similarity=0.410 Sum_probs=15.6
Q ss_pred ceEEeecCceeEEEEeee
Q psy3290 3 WFGMDIGGTLSKLVYFEP 20 (147)
Q Consensus 3 ~faiDIGGTL~KlVYf~~ 20 (147)
.+|||||||-+|.+=|..
T Consensus 6 ~lgIDiGtT~~k~~l~d~ 23 (503)
T 2w40_A 6 ILSIDQSTQSTKVFFYDE 23 (503)
T ss_dssp EEEEEECSSEEEEEEEET
T ss_pred EEEEEeCCcceEEEEECC
Confidence 479999999999887764
No 13
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=66.63 E-value=3.7 Score=32.96 Aligned_cols=18 Identities=39% Similarity=0.521 Sum_probs=15.9
Q ss_pred ceEEeecCceeEEEEeee
Q psy3290 3 WFGMDIGGTLSKLVYFEP 20 (147)
Q Consensus 3 ~faiDIGGTL~KlVYf~~ 20 (147)
.++||||+|-+|+..|+.
T Consensus 2 lL~IDIGNT~ik~gl~~~ 19 (268)
T 2h3g_X 2 IFVLDVGNTNAVLGVFEE 19 (268)
T ss_dssp EEEEEECSSEEEEEEEET
T ss_pred EEEEEECcCcEEEEEEEC
Confidence 578999999999999873
No 14
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=66.47 E-value=3.5 Score=32.59 Aligned_cols=18 Identities=28% Similarity=0.470 Sum_probs=15.6
Q ss_pred ceEEeecCceeEEEEeee
Q psy3290 3 WFGMDIGGTLSKLVYFEP 20 (147)
Q Consensus 3 ~faiDIGGTL~KlVYf~~ 20 (147)
.+|+|||||-+|++-+..
T Consensus 13 ~lGiDiGgT~i~~~l~d~ 30 (305)
T 1zc6_A 13 LIGVDGGGTGTRIRLHAS 30 (305)
T ss_dssp EEEEEECSSCEEEEEEET
T ss_pred EEEEEcCccceEEEEEcC
Confidence 589999999999887763
No 15
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=62.52 E-value=4.5 Score=31.45 Aligned_cols=27 Identities=7% Similarity=-0.112 Sum_probs=22.2
Q ss_pred HHHHHcCCceeeechhhhhhhhhhhhh
Q psy3290 86 MRIQEVNMKLEKCDELDCLIRGMLFIE 112 (147)
Q Consensus 86 ~f~~~lgv~l~k~DEMecLI~Gl~fll 112 (147)
.+++.+|+.+.-+....|...|-.++-
T Consensus 91 ~l~~~~~~pv~v~NDa~aaa~~e~~~g 117 (289)
T 2aa4_A 91 TLEQLTNLPTIAINDAQAAAWAEFQAL 117 (289)
T ss_dssp HHHHHHCSCEEEEEHHHHHHHHHHHTS
T ss_pred HHHHHHCCCEEEechHHHHHHHHHHhC
Confidence 567889999999999999988876553
No 16
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=62.43 E-value=4.9 Score=31.45 Aligned_cols=19 Identities=37% Similarity=0.541 Sum_probs=16.1
Q ss_pred CceEEeecCceeEEEEeee
Q psy3290 2 PWFGMDIGGTLSKLVYFEP 20 (147)
Q Consensus 2 p~faiDIGGTL~KlVYf~~ 20 (147)
-.+|+|||||-+|++-+..
T Consensus 3 ~~lgiDiGgt~~~~~l~d~ 21 (299)
T 2e2o_A 3 IIVGVDAGGTKTKAVAYDC 21 (299)
T ss_dssp CEEEEEECSSCEEEEEECT
T ss_pred EEEEEEeCCCcEEEEEEcC
Confidence 3589999999999988754
No 17
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=62.05 E-value=4.8 Score=34.40 Aligned_cols=18 Identities=28% Similarity=0.458 Sum_probs=15.5
Q ss_pred ceEEeecCceeEEEEeee
Q psy3290 3 WFGMDIGGTLSKLVYFEP 20 (147)
Q Consensus 3 ~faiDIGGTL~KlVYf~~ 20 (147)
.+|||||||-+|.+=|..
T Consensus 4 ~lgiDiGtT~~k~~l~d~ 21 (495)
T 2dpn_A 4 LLALDQGTTSSRAILFTL 21 (495)
T ss_dssp EEEEEECSSEEEEEEECT
T ss_pred EEEEeeCCcceEEEEECC
Confidence 479999999999887764
No 18
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=61.54 E-value=4.9 Score=34.14 Aligned_cols=18 Identities=22% Similarity=0.626 Sum_probs=15.5
Q ss_pred ceEEeecCceeEEEEeee
Q psy3290 3 WFGMDIGGTLSKLVYFEP 20 (147)
Q Consensus 3 ~faiDIGGTL~KlVYf~~ 20 (147)
.+|||||||-+|.+=|..
T Consensus 2 ~lgiDiGtt~~k~~l~d~ 19 (484)
T 2itm_A 2 YIGIDLGTSGVKVILLNE 19 (484)
T ss_dssp EEEEEECSSEEEEEEECT
T ss_pred EEEEEecCcccEEEEECC
Confidence 479999999999888764
No 19
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=60.29 E-value=5.2 Score=32.12 Aligned_cols=26 Identities=8% Similarity=0.203 Sum_probs=22.2
Q ss_pred HHHHHcCCc-eeeechhhhhhhhhhhh
Q psy3290 86 MRIQEVNMK-LEKCDELDCLIRGMLFI 111 (147)
Q Consensus 86 ~f~~~lgv~-l~k~DEMecLI~Gl~fl 111 (147)
.+++++|+. +.-+....|..-|-.++
T Consensus 96 ~l~~~~~~p~V~v~NDanaaalgE~~~ 122 (332)
T 1sz2_A 96 EMKKNLGFSHLEIINDFTAVSMAIPML 122 (332)
T ss_dssp HHHHHHTCSEEEEEEHHHHHHHHGGGC
T ss_pred HHHHHhCCCcEEEEeCHhHHhcccccc
Confidence 467889997 99999999999888765
No 20
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=60.24 E-value=4.6 Score=32.18 Aligned_cols=22 Identities=5% Similarity=-0.209 Sum_probs=18.0
Q ss_pred HHHHHcC---Cceeeechhhhhhhh
Q psy3290 86 MRIQEVN---MKLEKCDELDCLIRG 107 (147)
Q Consensus 86 ~f~~~lg---v~l~k~DEMecLI~G 107 (147)
.+++.++ +.+.-+....|...|
T Consensus 93 ~l~~~~~~~~~pv~v~NDa~aaa~a 117 (347)
T 2ch5_A 93 ELRDRFPYLSESYLITTDAAGSIAT 117 (347)
T ss_dssp HHHHHCTTSBSCEEEEEHHHHHHHH
T ss_pred HHHHhcCCCCceEEEECcHHHHHHh
Confidence 5677886 888888888888888
No 21
>2nrh_A Transcriptional activator, putative, BAF family; structural genomics, unknown function, putative transcription activator, PSI-2; 2.30A {Campylobacter jejuni} SCOP: c.55.1.13 c.55.1.13
Probab=60.15 E-value=4.3 Score=31.88 Aligned_cols=14 Identities=29% Similarity=0.401 Sum_probs=11.8
Q ss_pred CCceEEeecCceeE
Q psy3290 1 MPWFGMDIGGTLSK 14 (147)
Q Consensus 1 ~p~faiDIGGTL~K 14 (147)
|.|+++|||=|-+|
T Consensus 1 M~~L~iDiGNT~ik 14 (219)
T 2nrh_A 1 MSLLLCDIGNSNAN 14 (219)
T ss_dssp --CCEEEECSSEEE
T ss_pred CCEEEEEeCCCEEE
Confidence 78999999999999
No 22
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=58.87 E-value=6.6 Score=31.93 Aligned_cols=20 Identities=40% Similarity=0.639 Sum_probs=17.9
Q ss_pred CCceEEeecCceeEEEEeee
Q psy3290 1 MPWFGMDIGGTLSKLVYFEP 20 (147)
Q Consensus 1 ~p~faiDIGGTL~KlVYf~~ 20 (147)
|+-+|||+|.|.+++.|+.+
T Consensus 23 ~~viGID~GTt~s~va~~~~ 42 (404)
T 3i33_A 23 MPAIGIDLGTTYSCVGVFQH 42 (404)
T ss_dssp CCCEEEEECSSEEEEEEEET
T ss_pred CCEEEEEcCCccEEEEEEEC
Confidence 57799999999999999875
No 23
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=58.82 E-value=6.8 Score=32.48 Aligned_cols=17 Identities=35% Similarity=0.515 Sum_probs=15.4
Q ss_pred ceEEeecCceeEEEEee
Q psy3290 3 WFGMDIGGTLSKLVYFE 19 (147)
Q Consensus 3 ~faiDIGGTL~KlVYf~ 19 (147)
.+|||||||-+|++-+.
T Consensus 4 vlgidiGgt~ik~al~d 20 (381)
T 1saz_A 4 ILTINPGSTSTKLSIFE 20 (381)
T ss_dssp EEEEEECSSEEEEEEEE
T ss_pred EEEEECCccceeEEEEe
Confidence 68999999999998885
No 24
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=58.79 E-value=6.2 Score=33.93 Aligned_cols=18 Identities=39% Similarity=0.623 Sum_probs=15.8
Q ss_pred ceEEeecCceeEEEEeee
Q psy3290 3 WFGMDIGGTLSKLVYFEP 20 (147)
Q Consensus 3 ~faiDIGGTL~KlVYf~~ 20 (147)
.+|||||+|-+|.+=|..
T Consensus 6 ~lgIDiGtts~K~~l~d~ 23 (504)
T 3ll3_A 6 IIGMDVGTTATKGVLYDI 23 (504)
T ss_dssp EEEEEECSSEEEEEEEET
T ss_pred EEEEEecCCceEEEEEcC
Confidence 589999999999887765
No 25
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=58.69 E-value=7 Score=31.45 Aligned_cols=19 Identities=26% Similarity=0.443 Sum_probs=16.7
Q ss_pred CceEEeecCceeEEEEeee
Q psy3290 2 PWFGMDIGGTLSKLVYFEP 20 (147)
Q Consensus 2 p~faiDIGGTL~KlVYf~~ 20 (147)
+.+|||+|.|.+|++|+.+
T Consensus 19 ~viGID~GTt~s~va~~~~ 37 (394)
T 3qfu_A 19 TVIGIDLGTTYSCVAVMKN 37 (394)
T ss_dssp SCEEEEECSSEEEEEEECS
T ss_pred CEEEEEeCcCcEEEEEEEC
Confidence 3589999999999999874
No 26
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=58.14 E-value=6.3 Score=33.42 Aligned_cols=18 Identities=11% Similarity=0.311 Sum_probs=15.4
Q ss_pred ceEEeecCceeEEEEeee
Q psy3290 3 WFGMDIGGTLSKLVYFEP 20 (147)
Q Consensus 3 ~faiDIGGTL~KlVYf~~ 20 (147)
.+|||||||-+|.+=|..
T Consensus 6 ~lgiDiGtts~k~~l~d~ 23 (489)
T 2uyt_A 6 CVAVDLGASSGRVMLARY 23 (489)
T ss_dssp EEEEEECSSEEEEEEEEE
T ss_pred EEEEEecCCCceEEEEEe
Confidence 479999999999887764
No 27
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=57.97 E-value=5.9 Score=31.49 Aligned_cols=27 Identities=0% Similarity=-0.109 Sum_probs=22.8
Q ss_pred HHHHHcCCceeeechhhhhhhhhhhhh
Q psy3290 86 MRIQEVNMKLEKCDELDCLIRGMLFIE 112 (147)
Q Consensus 86 ~f~~~lgv~l~k~DEMecLI~Gl~fll 112 (147)
.+++++|+.+.-+....|..-|-.++-
T Consensus 93 ~l~~~~~~pv~v~NDa~aaal~E~~~g 119 (302)
T 3vov_A 93 ILEEATGRPVFLENDANAAALAEHHLG 119 (302)
T ss_dssp HHHHHHSSCEEEEEHHHHHHHHHHHHS
T ss_pred HHHHhhCCCEEEEechHHHHHHHHHhC
Confidence 567889999999999999988877664
No 28
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=57.87 E-value=5.3 Score=32.00 Aligned_cols=27 Identities=7% Similarity=0.166 Sum_probs=22.7
Q ss_pred HHHHHcCCceeeechhhhhhhhhhhhh
Q psy3290 86 MRIQEVNMKLEKCDELDCLIRGMLFIE 112 (147)
Q Consensus 86 ~f~~~lgv~l~k~DEMecLI~Gl~fll 112 (147)
.+++++|+.+.-+....|..-|=.++-
T Consensus 92 ~l~~~~~~pV~v~NDanaaalaE~~~G 118 (302)
T 3epq_A 92 TVXNEMXIPVGFSTDVNAAALGEFLFG 118 (302)
T ss_dssp HHHHHHCSCEEEEEHHHHHHHHHHHHS
T ss_pred HHHHHhCCCEEEechhHHHHHHHHHhC
Confidence 567889999999999999988877663
No 29
>1v8d_A Hypothetical protein (TT1679); X-RAY craytallography, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.16A {Thermus thermophilus} SCOP: c.140.1.1
Probab=57.58 E-value=3.5 Score=33.24 Aligned_cols=12 Identities=58% Similarity=0.775 Sum_probs=10.3
Q ss_pred ceEEeecCceeE
Q psy3290 3 WFGMDIGGTLSK 14 (147)
Q Consensus 3 ~faiDIGGTL~K 14 (147)
+-|||||+||+-
T Consensus 168 ~AGIDIGdTlIG 179 (235)
T 1v8d_A 168 HGGMDIGGVLIG 179 (235)
T ss_dssp SEEEEESSCCCG
T ss_pred cCCcccccceee
Confidence 679999999974
No 30
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=57.17 E-value=6.6 Score=33.52 Aligned_cols=18 Identities=22% Similarity=0.451 Sum_probs=15.6
Q ss_pred ceEEeecCceeEEEEeee
Q psy3290 3 WFGMDIGGTLSKLVYFEP 20 (147)
Q Consensus 3 ~faiDIGGTL~KlVYf~~ 20 (147)
.+|||||||-+|.+=|..
T Consensus 5 ~lgiDiGtt~~k~~l~d~ 22 (497)
T 2zf5_O 5 VLSLDEGTTSARAIIFDR 22 (497)
T ss_dssp EEEEEECSSEEEEEEECT
T ss_pred EEEEecCCchhEEEEECC
Confidence 579999999999887764
No 31
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=56.31 E-value=6.5 Score=31.08 Aligned_cols=27 Identities=7% Similarity=0.195 Sum_probs=22.5
Q ss_pred HHHHHcCCceeeechhhhhhhhhhhhh
Q psy3290 86 MRIQEVNMKLEKCDELDCLIRGMLFIE 112 (147)
Q Consensus 86 ~f~~~lgv~l~k~DEMecLI~Gl~fll 112 (147)
.+++.+|+.+.-+....|..-|-.++-
T Consensus 92 ~l~~~~~~pV~v~NDa~aaal~E~~~g 118 (297)
T 4htl_A 92 WLEAETGLPVAIENDANCALLAEKWLG 118 (297)
T ss_dssp HHHHHHCSCEEEEEHHHHHHHHHHHHS
T ss_pred HHHHHHCcCEEEecHHHHHHHHHHHhC
Confidence 467889999999999999988877664
No 32
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=55.51 E-value=7 Score=30.29 Aligned_cols=27 Identities=7% Similarity=-0.043 Sum_probs=22.8
Q ss_pred HHHHHcCCceeeechhhhhhhhhhhhh
Q psy3290 86 MRIQEVNMKLEKCDELDCLIRGMLFIE 112 (147)
Q Consensus 86 ~f~~~lgv~l~k~DEMecLI~Gl~fll 112 (147)
.+++++|+.+.-+....|..-|-.++-
T Consensus 109 ~l~~~~~~pV~v~NDanaaalaE~~~g 135 (267)
T 1woq_A 109 LLTARLGRPVEVINDADAAGLAEARYG 135 (267)
T ss_dssp HHHHHHTSCEEEEEHHHHHHHHHHHHS
T ss_pred HHHHHHCCCEEEeehhHHHHHHHHHhC
Confidence 567889999999999999998876653
No 33
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=53.33 E-value=8.2 Score=33.84 Aligned_cols=20 Identities=25% Similarity=0.549 Sum_probs=16.8
Q ss_pred ceEEeecCceeEEEEeeeCC
Q psy3290 3 WFGMDIGGTLSKLVYFEPKD 22 (147)
Q Consensus 3 ~faiDIGGTL~KlVYf~~~~ 22 (147)
.+|||+|||-.|++-..-.+
T Consensus 82 ~LalDlGGTn~Rv~~V~l~g 101 (485)
T 3o8m_A 82 FLALDLGGTNLRVVLVKLGG 101 (485)
T ss_dssp EEEEEESSSEEEEEEEEEES
T ss_pred EEEEEecCCeEEEEEEEECC
Confidence 58999999999988886543
No 34
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=53.07 E-value=8.8 Score=30.59 Aligned_cols=27 Identities=11% Similarity=0.035 Sum_probs=22.5
Q ss_pred HHHHHcCCceeeechhhhhhhhhhhhh
Q psy3290 86 MRIQEVNMKLEKCDELDCLIRGMLFIE 112 (147)
Q Consensus 86 ~f~~~lgv~l~k~DEMecLI~Gl~fll 112 (147)
.+++.+|+.+.-+....|..-|-.++-
T Consensus 91 ~l~~~~~~pv~v~NDa~aaal~E~~~g 117 (321)
T 3vgl_A 91 KVEQRVGLPVVVENDANAAAWGEYRFG 117 (321)
T ss_dssp HHHHHHCSCEEEEEHHHHHHHHHHHHS
T ss_pred HHhhhhCCCEEEEehhhhHHHHHHHhC
Confidence 567888999999999999988877663
No 35
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=53.02 E-value=8.9 Score=32.97 Aligned_cols=18 Identities=28% Similarity=0.407 Sum_probs=15.4
Q ss_pred ceEEeecCceeEEEEeee
Q psy3290 3 WFGMDIGGTLSKLVYFEP 20 (147)
Q Consensus 3 ~faiDIGGTL~KlVYf~~ 20 (147)
.+|||||+|-+|.+=|..
T Consensus 9 ~lgIDiGtts~k~~l~d~ 26 (508)
T 3ifr_A 9 VIGLDIGTTSTIAILVRL 26 (508)
T ss_dssp EEEEEECSSEEEEEEEET
T ss_pred EEEEEecCcceEEEEECC
Confidence 479999999999887764
No 36
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=52.42 E-value=8.6 Score=32.91 Aligned_cols=18 Identities=28% Similarity=0.471 Sum_probs=15.5
Q ss_pred ceEEeecCceeEEEEeee
Q psy3290 3 WFGMDIGGTLSKLVYFEP 20 (147)
Q Consensus 3 ~faiDIGGTL~KlVYf~~ 20 (147)
.+|||||||-+|.+=|..
T Consensus 4 ~lgiDiGtts~k~~l~d~ 21 (504)
T 2d4w_A 4 VLAIDQGTTSSRAIVFDH 21 (504)
T ss_dssp EEEEEECSSEEEEEEECT
T ss_pred EEEEecCCcceEEEEECC
Confidence 479999999999888764
No 37
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=51.83 E-value=8.2 Score=33.21 Aligned_cols=20 Identities=20% Similarity=0.511 Sum_probs=17.0
Q ss_pred ceEEeecCceeEEEEeeeCC
Q psy3290 3 WFGMDIGGTLSKLVYFEPKD 22 (147)
Q Consensus 3 ~faiDIGGTL~KlVYf~~~~ 22 (147)
++|||+|||-.|++-..-..
T Consensus 70 ~lalDlGGTn~Rv~~V~l~G 89 (451)
T 1bdg_A 70 FLALDLGGTNYRVLSVTLEG 89 (451)
T ss_dssp EEEEEESSSSEEEEEEEECC
T ss_pred EEEEEeCCCeEEEEEEecCC
Confidence 48999999999999887643
No 38
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=51.79 E-value=7.5 Score=31.69 Aligned_cols=22 Identities=9% Similarity=-0.090 Sum_probs=17.0
Q ss_pred HHHHcCC-ceeeechhhhhhhhh
Q psy3290 87 RIQEVNM-KLEKCDELDCLIRGM 108 (147)
Q Consensus 87 f~~~lgv-~l~k~DEMecLI~Gl 108 (147)
+++.+++ .+.-+....|..-|.
T Consensus 123 l~~~~~~~pv~v~NDa~aaalge 145 (373)
T 2q2r_A 123 PKALFPPGHSAILNDLEAGGFGV 145 (373)
T ss_dssp CTTTSCTTSEEEEEHHHHHHHHH
T ss_pred HHHhcCCCCEEEEccHhHHhccc
Confidence 3455788 888888999888884
No 39
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=50.92 E-value=8.1 Score=36.16 Aligned_cols=18 Identities=17% Similarity=0.569 Sum_probs=15.6
Q ss_pred ceEEeecCceeEEEEeee
Q psy3290 3 WFGMDIGGTLSKLVYFEP 20 (147)
Q Consensus 3 ~faiDIGGTL~KlVYf~~ 20 (147)
.+|||||||-.|++-+.-
T Consensus 80 ~laiDlGGTnirv~lv~~ 97 (917)
T 1cza_N 80 FIALDLGGSSFRILRVQV 97 (917)
T ss_dssp EEEEEESSSSEEEEEEEE
T ss_pred EEEEEeCCCeEEEEEEEe
Confidence 489999999999888764
No 40
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=50.27 E-value=10 Score=32.48 Aligned_cols=18 Identities=28% Similarity=0.475 Sum_probs=15.5
Q ss_pred ceEEeecCceeEEEEeee
Q psy3290 3 WFGMDIGGTLSKLVYFEP 20 (147)
Q Consensus 3 ~faiDIGGTL~KlVYf~~ 20 (147)
.+|||||+|-+|.+=|..
T Consensus 7 ~lgIDiGtts~k~~l~d~ 24 (506)
T 3h3n_X 7 VMAIDQGTTSSRAIIFDR 24 (506)
T ss_dssp EEEEEECSSEEEEEEEET
T ss_pred EEEEEcCCCceEEEEECC
Confidence 479999999999887764
No 41
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=49.72 E-value=10 Score=32.45 Aligned_cols=18 Identities=28% Similarity=0.488 Sum_probs=15.4
Q ss_pred ceEEeecCceeEEEEeee
Q psy3290 3 WFGMDIGGTLSKLVYFEP 20 (147)
Q Consensus 3 ~faiDIGGTL~KlVYf~~ 20 (147)
.+|||||+|-+|.+=|..
T Consensus 8 ~lgIDiGtts~k~~l~d~ 25 (501)
T 3g25_A 8 ILSIDQGTTSSRAILFNQ 25 (501)
T ss_dssp EEEEEECSSEEEEEEECT
T ss_pred EEEEEeCccceEEEEEcC
Confidence 579999999999887764
No 42
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=49.71 E-value=10 Score=32.79 Aligned_cols=18 Identities=22% Similarity=0.464 Sum_probs=15.4
Q ss_pred ceEEeecCceeEEEEeee
Q psy3290 3 WFGMDIGGTLSKLVYFEP 20 (147)
Q Consensus 3 ~faiDIGGTL~KlVYf~~ 20 (147)
.+|||||+|-+|.+=|..
T Consensus 28 ~lgIDiGtts~k~~l~d~ 45 (520)
T 4e1j_A 28 ILAIDQGTTSTRAIVFDG 45 (520)
T ss_dssp EEEEEECSSEEEEEEECT
T ss_pred EEEEEeCCcceEEEEECC
Confidence 479999999999887754
No 43
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=49.52 E-value=8.7 Score=30.84 Aligned_cols=27 Identities=7% Similarity=0.124 Sum_probs=22.4
Q ss_pred HHHHHcCCceeeechhhhhhhhhhhhh
Q psy3290 86 MRIQEVNMKLEKCDELDCLIRGMLFIE 112 (147)
Q Consensus 86 ~f~~~lgv~l~k~DEMecLI~Gl~fll 112 (147)
.+++.+|+.+.-+....|..-|-.++-
T Consensus 115 ~l~~~~~~pV~v~NDa~aaalgE~~~g 141 (327)
T 4db3_A 115 DLEAKIGRSVKIENDANCFALSEAWDE 141 (327)
T ss_dssp HHHHHHSSCCEEEEHHHHHHHHHHTST
T ss_pred HHHHHHCCCEEEecchhHHHHHHHHhC
Confidence 567889999999999999988876653
No 44
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=48.99 E-value=9 Score=30.66 Aligned_cols=26 Identities=4% Similarity=-0.046 Sum_probs=20.5
Q ss_pred HHHHHcCCceeeechhhhhhhhhhhh
Q psy3290 86 MRIQEVNMKLEKCDELDCLIRGMLFI 111 (147)
Q Consensus 86 ~f~~~lgv~l~k~DEMecLI~Gl~fl 111 (147)
.+++.+|+.+.-+....|..-|-.++
T Consensus 126 ~l~~~~~~pv~v~NDa~aaal~E~~~ 151 (343)
T 2yhw_A 126 PLSDTLHLPVWVDNDGNCAALAERKF 151 (343)
T ss_dssp HHHHHHCSCEEEEEHHHHHHHHHHHT
T ss_pred HHHHHHCCCEEEechhHHHHHHHHHh
Confidence 45678899998888898888776554
No 45
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=48.96 E-value=9 Score=30.63 Aligned_cols=22 Identities=9% Similarity=0.040 Sum_probs=17.7
Q ss_pred HHHHHcCCceeeechhhhhhhh
Q psy3290 86 MRIQEVNMKLEKCDELDCLIRG 107 (147)
Q Consensus 86 ~f~~~lgv~l~k~DEMecLI~G 107 (147)
.+++++|+.+.-+....|...|
T Consensus 102 ~l~~~~~~pv~v~NDanaaa~~ 123 (310)
T 3htv_A 102 KLENTLNCPVEFSRDVNLQLSW 123 (310)
T ss_dssp HHHHHHTSCEEEEEHHHHHHHH
T ss_pred HHHHHhCCCEEEeeHHHHHHHH
Confidence 5678899999999998886543
No 46
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=48.62 E-value=11 Score=32.42 Aligned_cols=18 Identities=28% Similarity=0.363 Sum_probs=15.4
Q ss_pred ceEEeecCceeEEEEeee
Q psy3290 3 WFGMDIGGTLSKLVYFEP 20 (147)
Q Consensus 3 ~faiDIGGTL~KlVYf~~ 20 (147)
.+|||||+|-+|.+=|..
T Consensus 5 ~lgIDiGtts~k~~l~d~ 22 (510)
T 2p3r_A 5 IVALDQGTTSSRAVVMDH 22 (510)
T ss_dssp EEEEEECSSEEEEEEECT
T ss_pred EEEEEcCCcceEEEEECC
Confidence 479999999999887764
No 47
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=47.84 E-value=12 Score=29.44 Aligned_cols=26 Identities=4% Similarity=0.009 Sum_probs=20.7
Q ss_pred HHHHHcCCceeeechhhhhhhhhhhh
Q psy3290 86 MRIQEVNMKLEKCDELDCLIRGMLFI 111 (147)
Q Consensus 86 ~f~~~lgv~l~k~DEMecLI~Gl~fl 111 (147)
.+++.+|+.+.-+....|..-|-.+.
T Consensus 103 ~l~~~~~~pv~v~ND~~aaa~~e~~~ 128 (326)
T 2qm1_A 103 QIESALGIPFALDNDANVAALGERWK 128 (326)
T ss_dssp HHHHHHCSCEEEEEHHHHHHHHHHHH
T ss_pred HHHHHhCCCEEEecHHHHHHHHHHHh
Confidence 45678899999999999988776555
No 48
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=47.25 E-value=12 Score=32.30 Aligned_cols=18 Identities=33% Similarity=0.490 Sum_probs=15.4
Q ss_pred ceEEeecCceeEEEEeee
Q psy3290 3 WFGMDIGGTLSKLVYFEP 20 (147)
Q Consensus 3 ~faiDIGGTL~KlVYf~~ 20 (147)
.+|||||+|-+|.+=|..
T Consensus 8 ~lgIDiGTts~Ka~l~d~ 25 (482)
T 3h6e_A 8 TIVIDLGKTLSKVSLWDL 25 (482)
T ss_dssp CEEEEECSSEEEEEEECT
T ss_pred EEEEEcCCCCeEEEEEEC
Confidence 579999999999887763
No 49
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=46.61 E-value=13 Score=30.28 Aligned_cols=17 Identities=18% Similarity=0.257 Sum_probs=15.8
Q ss_pred CceEEeecCceeEEEEe
Q psy3290 2 PWFGMDIGGTLSKLVYF 18 (147)
Q Consensus 2 p~faiDIGGTL~KlVYf 18 (147)
..+|||+|.|.++++|+
T Consensus 14 ~vvGIDlGTt~s~va~~ 30 (409)
T 4gni_A 14 VVIGITFGNSNSSIAHT 30 (409)
T ss_dssp CEEEEEECSSEEEEEEE
T ss_pred cEEEEEcCCCeEEEEEE
Confidence 56899999999999998
No 50
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=46.16 E-value=13 Score=32.25 Aligned_cols=18 Identities=22% Similarity=0.529 Sum_probs=15.5
Q ss_pred ceEEeecCceeEEEEeee
Q psy3290 3 WFGMDIGGTLSKLVYFEP 20 (147)
Q Consensus 3 ~faiDIGGTL~KlVYf~~ 20 (147)
.+|||||+|-+|.+=|..
T Consensus 7 ~lgIDiGtts~ka~l~d~ 24 (554)
T 3l0q_A 7 FIGVDVGTGSARAGVFDL 24 (554)
T ss_dssp EEEEEECSSEEEEEEEET
T ss_pred EEEEEECcccEEEEEECC
Confidence 579999999999887764
No 51
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=45.87 E-value=10 Score=28.86 Aligned_cols=18 Identities=28% Similarity=0.326 Sum_probs=15.3
Q ss_pred ceEEeecCceeEEEEeee
Q psy3290 3 WFGMDIGGTLSKLVYFEP 20 (147)
Q Consensus 3 ~faiDIGGTL~KlVYf~~ 20 (147)
..|||||.+-+|+|-+..
T Consensus 30 ~~gIDiGS~s~k~vi~~~ 47 (272)
T 3h1q_A 30 KVGVDLGTADIVLVVTDQ 47 (272)
T ss_dssp EEEEECCSSEEEEEEECT
T ss_pred EEEEEcccceEEEEEECC
Confidence 579999999999998643
No 52
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=45.40 E-value=11 Score=29.83 Aligned_cols=26 Identities=4% Similarity=0.083 Sum_probs=20.8
Q ss_pred HHHHHcCCceeeechhhhhhhhhhhh
Q psy3290 86 MRIQEVNMKLEKCDELDCLIRGMLFI 111 (147)
Q Consensus 86 ~f~~~lgv~l~k~DEMecLI~Gl~fl 111 (147)
.+++.+++.+.-+....|..-|-.+.
T Consensus 115 ~l~~~~~~pv~v~NDa~aaalgE~~~ 140 (327)
T 2ap1_A 115 DLSARLDRDVRLDNDANCFALSEAWD 140 (327)
T ss_dssp HHHHHHTSCEEEEEHHHHHHHHHHTS
T ss_pred HHHHHHCCCEEEecHHHHHHHHHHHh
Confidence 46678899999999999988776554
No 53
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=44.57 E-value=11 Score=30.02 Aligned_cols=27 Identities=11% Similarity=0.317 Sum_probs=22.5
Q ss_pred HHHHHc-CCceeeechhhhhhhhhhhhh
Q psy3290 86 MRIQEV-NMKLEKCDELDCLIRGMLFIE 112 (147)
Q Consensus 86 ~f~~~l-gv~l~k~DEMecLI~Gl~fll 112 (147)
.+++.+ |+.+.-+....|..-|-.++-
T Consensus 112 ~l~~~~~~~pV~v~NDa~aaalaE~~~g 139 (321)
T 3r8e_A 112 ILRSEFPHIHFKIENDAKCAALGEYYFG 139 (321)
T ss_dssp HHHHHCTTSEEEEEEHHHHHHHHHHHHS
T ss_pred HHHHHcCCCCEEEEchHHHHHHHHHHhC
Confidence 567889 999999999999988876663
No 54
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=44.33 E-value=14 Score=31.96 Aligned_cols=17 Identities=18% Similarity=0.141 Sum_probs=15.5
Q ss_pred ceEEeecCceeEEEEee
Q psy3290 3 WFGMDIGGTLSKLVYFE 19 (147)
Q Consensus 3 ~faiDIGGTL~KlVYf~ 19 (147)
.+|||||+|-+|.+=|.
T Consensus 7 ~lgIDiGtts~ka~l~d 23 (515)
T 3i8b_A 7 VAGVDTSTQSCKVRVTD 23 (515)
T ss_dssp EEEEEECSSEEEEEEEE
T ss_pred EEEEEeccccEEEEEEE
Confidence 58999999999998887
No 55
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=43.41 E-value=14 Score=31.67 Aligned_cols=18 Identities=28% Similarity=0.204 Sum_probs=15.3
Q ss_pred ceEEeecCceeEEEEeee
Q psy3290 3 WFGMDIGGTLSKLVYFEP 20 (147)
Q Consensus 3 ~faiDIGGTL~KlVYf~~ 20 (147)
.+|||||+|-+|.+=|..
T Consensus 7 ~lgIDiGtts~k~~l~d~ 24 (511)
T 3hz6_A 7 IATFDIGTTEVKAALADR 24 (511)
T ss_dssp EEEEEECSSEEEEEEECT
T ss_pred EEEEEeCCCceEEEEECC
Confidence 479999999999877764
No 56
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=43.22 E-value=16 Score=29.22 Aligned_cols=17 Identities=35% Similarity=0.550 Sum_probs=15.7
Q ss_pred ceEEeecCceeEEEEee
Q psy3290 3 WFGMDIGGTLSKLVYFE 19 (147)
Q Consensus 3 ~faiDIGGTL~KlVYf~ 19 (147)
++|||||.|-+|+|..+
T Consensus 15 ~vgiDiGt~~i~~~~~~ 31 (377)
T 2ych_A 15 ALGLEIGASALKLVEVS 31 (377)
T ss_dssp CEEEEECSSEEEEEEEE
T ss_pred eEEEEeCCCeEEEEEEe
Confidence 68999999999999986
No 57
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=40.44 E-value=17 Score=31.65 Aligned_cols=18 Identities=22% Similarity=0.366 Sum_probs=16.0
Q ss_pred ceEEeecCceeEEEEeee
Q psy3290 3 WFGMDIGGTLSKLVYFEP 20 (147)
Q Consensus 3 ~faiDIGGTL~KlVYf~~ 20 (147)
.+|||||+|-+|.+=|..
T Consensus 7 ~lgIDiGTts~Ka~l~d~ 24 (572)
T 3jvp_A 7 TIGVDYGTESGRAVLIDL 24 (572)
T ss_dssp EEEEEECSSEEEEEEEET
T ss_pred EEEEecCCcceEEEEEEC
Confidence 589999999999988875
No 58
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=37.21 E-value=19 Score=28.88 Aligned_cols=19 Identities=26% Similarity=0.413 Sum_probs=16.8
Q ss_pred CceEEeecCceeEEEEeee
Q psy3290 2 PWFGMDIGGTLSKLVYFEP 20 (147)
Q Consensus 2 p~faiDIGGTL~KlVYf~~ 20 (147)
+.+|||+|.|-++++|+.+
T Consensus 3 ~~vGIDlGTt~s~va~~~~ 21 (383)
T 1dkg_D 3 KIIGIDLGTTNSCVAIMDG 21 (383)
T ss_dssp CCCEEECCSSEEEEEEEET
T ss_pred cEEEEEcCCCCEEEEEEEC
Confidence 4689999999999999964
No 59
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=35.48 E-value=22 Score=28.08 Aligned_cols=16 Identities=19% Similarity=0.339 Sum_probs=14.1
Q ss_pred CceEEeecCceeEEEE
Q psy3290 2 PWFGMDIGGTLSKLVY 17 (147)
Q Consensus 2 p~faiDIGGTL~KlVY 17 (147)
+.+|||.|.|.+|+.+
T Consensus 4 ~~igIDlGT~~s~v~~ 19 (344)
T 1jce_A 4 KDIGIDLGTANTLVFL 19 (344)
T ss_dssp CEEEEEECSSEEEEEE
T ss_pred ceEEEEcCcCcEEEEE
Confidence 5789999999999865
No 60
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=35.09 E-value=21 Score=29.21 Aligned_cols=27 Identities=4% Similarity=-0.036 Sum_probs=21.9
Q ss_pred HHHHHcCCceeeechhhhhhhhhhhhh
Q psy3290 86 MRIQEVNMKLEKCDELDCLIRGMLFIE 112 (147)
Q Consensus 86 ~f~~~lgv~l~k~DEMecLI~Gl~fll 112 (147)
.+++.+|+.+.-+....|..-|-.++-
T Consensus 181 ~l~~~~~~pv~v~NDa~aaalaE~~~g 207 (406)
T 1z6r_A 181 ALEQHTGVPVYIQHDISAWTMAEALFG 207 (406)
T ss_dssp HHHHHHSSCEEEEEHHHHHHHHHHHHS
T ss_pred HHHHHHCCCEEEechhHHHHHHHHHhc
Confidence 567888999999999999888876653
No 61
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=34.07 E-value=25 Score=28.68 Aligned_cols=27 Identities=7% Similarity=0.037 Sum_probs=22.1
Q ss_pred HHHHHcCCceeeechhhhhhhhhhhhh
Q psy3290 86 MRIQEVNMKLEKCDELDCLIRGMLFIE 112 (147)
Q Consensus 86 ~f~~~lgv~l~k~DEMecLI~Gl~fll 112 (147)
.+++.+|+.+.-+....|..-|-.++-
T Consensus 183 ~l~~~~~~pV~v~NDanaaalaE~~~g 209 (380)
T 2hoe_A 183 LLKEKYGIEVWVENDADMGAVGEKWYT 209 (380)
T ss_dssp HHHHHHCSEEEEEEHHHHHHHHHHHHT
T ss_pred HHHHHhCCCEEEechHHHHHHHHHHhC
Confidence 467889999999999999988876653
No 62
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=33.73 E-value=24 Score=27.93 Aligned_cols=16 Identities=31% Similarity=0.200 Sum_probs=14.3
Q ss_pred ceEEeecCceeEEEEe
Q psy3290 3 WFGMDIGGTLSKLVYF 18 (147)
Q Consensus 3 ~faiDIGGTL~KlVYf 18 (147)
.+|+|+|-|.+|+++-
T Consensus 2 ~igiD~G~sntK~~~~ 17 (320)
T 2zgy_A 2 LVFIDDGSTNIKLQWQ 17 (320)
T ss_dssp EEEEEECSSEEEEEEE
T ss_pred eEEEecCCccceEEEe
Confidence 5899999999999983
No 63
>2h7g_X DNA topoisomerase 1; type IB topoisomerase, DNA binding, protein-DNA complex, isomerase/DNA complex; HET: DNA; 1.90A {Variola virus} PDB: 2h7f_X* 3igc_A* 1a41_A
Probab=32.91 E-value=35 Score=28.38 Aligned_cols=30 Identities=20% Similarity=0.414 Sum_probs=24.9
Q ss_pred HHhhhcccCCCCCcccccceeecceeeEEE
Q psy3290 40 KYLTKNKAYGSTGHRDTHLQVLYTTLTLLC 69 (147)
Q Consensus 40 ~~l~~n~~yg~~g~rd~~le~~~~t~~LhF 69 (147)
+|...|.+||-+..|..|.++...++++.|
T Consensus 135 kya~en~T~GltTLr~eHV~l~~~~v~fdF 164 (314)
T 2h7g_X 135 KYLKENETVGLLTLKNKHIEISPDKIVIKF 164 (314)
T ss_dssp HHHHHHCCCCSTTCBGGGEEEETTEEEEEE
T ss_pred hhhhhcCCEeeeccchhheEEECCEEEEEE
Confidence 466678999999999999999877776666
No 64
>3vxv_A Methyl-CPG-binding domain protein 4; methyl CPG binding domain, protein-DNA complex, versatIle BA recognition, hydrolase-DNA complex; HET: DNA 5CM; 2.00A {Mus musculus} PDB: 3vxx_A* 3vyb_A* 3vyq_A*
Probab=32.60 E-value=15 Score=23.89 Aligned_cols=27 Identities=19% Similarity=0.460 Sum_probs=18.8
Q ss_pred EEEeeeCCCCCCchhhHHHHHHHHHHHhhhcccC
Q psy3290 15 LVYFEPKDITPDEANSEIETLKNIRKYLTKNKAY 48 (147)
Q Consensus 15 lVYf~~~~~~~~~~~~e~~~l~~i~~~l~~n~~y 48 (147)
+.|++|.+ .+-+|..++.+||.+|..+
T Consensus 28 vyY~sP~G-------kk~RSk~ev~~yL~~~~~~ 54 (69)
T 3vxv_A 28 VYFISPQG-------LKFRSKRSLANYLLKNGET 54 (69)
T ss_dssp EEEECTTS-------CEECSHHHHHHHHHHHCCC
T ss_pred EEEEcCCC-------CEeeCHHHHHHHHHhCCCC
Confidence 56677654 3556678899999887543
No 65
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=31.65 E-value=25 Score=32.88 Aligned_cols=19 Identities=21% Similarity=0.597 Sum_probs=16.5
Q ss_pred ceEEeecCceeEEEEeeeC
Q psy3290 3 WFGMDIGGTLSKLVYFEPK 21 (147)
Q Consensus 3 ~faiDIGGTL~KlVYf~~~ 21 (147)
.+|||+|||-.|++-+.-.
T Consensus 528 ~lalDlGGTn~Rv~~V~l~ 546 (917)
T 1cza_N 528 FLALDLGGTNFRVLLVKIR 546 (917)
T ss_dssp EEEEEESSSSEEEEEEEEE
T ss_pred EEEEEECCCcEEEEEEEeC
Confidence 5799999999998888764
No 66
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=31.42 E-value=26 Score=29.04 Aligned_cols=27 Identities=0% Similarity=-0.066 Sum_probs=22.1
Q ss_pred HHHHHcCCceeeechhhhhhhhhhhhh
Q psy3290 86 MRIQEVNMKLEKCDELDCLIRGMLFIE 112 (147)
Q Consensus 86 ~f~~~lgv~l~k~DEMecLI~Gl~fll 112 (147)
.+++.+|+.+.-+....|..-|-.++-
T Consensus 203 ~L~~~~~~pV~v~NDa~aaalaE~~~g 229 (429)
T 1z05_A 203 EIYKATGLPVFVANDTRAWALAEKLFG 229 (429)
T ss_dssp HHHHHHCSCEEEEEHHHHHHHHHHHHS
T ss_pred HHHHHhCCCEEEechhHHHHHHHHHhC
Confidence 466889999999999999988876653
No 67
>3m4a_A Putative type I topoisomerase; type IB, topib, protein-DNA complex, isomerase-DNA complex; HET: DNA; 1.65A {Deinococcus radiodurans} PDB: 2f4q_A*
Probab=31.19 E-value=32 Score=29.06 Aligned_cols=31 Identities=29% Similarity=0.355 Sum_probs=26.1
Q ss_pred HHhhhcccCCCCCcccccceeecceeeEEEE
Q psy3290 40 KYLTKNKAYGSTGHRDTHLQVLYTTLTLLCI 70 (147)
Q Consensus 40 ~~l~~n~~yg~~g~rd~~le~~~~t~~LhFi 70 (147)
+|...|.+||-+-.|..|.++...++++.|.
T Consensus 142 ~Ya~en~T~GltTLr~~HV~~~~~~v~f~F~ 172 (346)
T 3m4a_A 142 IYARQHKTYGLSTLRQRHVVVDGNTVTFRFK 172 (346)
T ss_dssp HHHHHHCCCCGGGCBGGGEEEETTEEEEEEE
T ss_pred hhhhhcCCcccccccHhheeeeCCEEEEEEe
Confidence 5777899999999999999998777777664
No 68
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=30.22 E-value=29 Score=29.12 Aligned_cols=19 Identities=32% Similarity=0.637 Sum_probs=13.9
Q ss_pred ceEEeecCceeEEEEeeeC
Q psy3290 3 WFGMDIGGTLSKLVYFEPK 21 (147)
Q Consensus 3 ~faiDIGGTL~KlVYf~~~ 21 (147)
++|+||||--+|++-.+..
T Consensus 2 iiG~DIGGAn~K~a~~~~~ 20 (334)
T 3cet_A 2 ILGIDIGGANTKITELHEN 20 (334)
T ss_dssp EEEEEEC--CEEEEEECST
T ss_pred eeEEEecccceeeeeecCC
Confidence 5899999999999886543
No 69
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=29.97 E-value=35 Score=29.14 Aligned_cols=19 Identities=32% Similarity=0.429 Sum_probs=16.9
Q ss_pred CceEEeecCceeEEEEeee
Q psy3290 2 PWFGMDIGGTLSKLVYFEP 20 (147)
Q Consensus 2 p~faiDIGGTL~KlVYf~~ 20 (147)
+.+|||+|.|.+++.|+.+
T Consensus 3 ~~iGIDlGTt~s~va~~~~ 21 (509)
T 2v7y_A 3 KIIGIDLGTTNSCVAVLEG 21 (509)
T ss_dssp CEEEEEECSSEEEEEEEET
T ss_pred CEEEEEcCCceEEEEEEEC
Confidence 5789999999999999864
No 70
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=29.93 E-value=32 Score=28.55 Aligned_cols=27 Identities=4% Similarity=-0.069 Sum_probs=22.6
Q ss_pred HHHHHcCCceeeechhhhhhhhhhhhh
Q psy3290 86 MRIQEVNMKLEKCDELDCLIRGMLFIE 112 (147)
Q Consensus 86 ~f~~~lgv~l~k~DEMecLI~Gl~fll 112 (147)
.+++++|+.+.-+....|..-|-.++-
T Consensus 103 ~L~~~~g~PV~veNDanaaAlgE~~~G 129 (366)
T 3mcp_A 103 FLEDIFGIPVFINNDGSLFAYGEALTG 129 (366)
T ss_dssp HHHHHHCSCEEEECHHHHHHHHHHHTS
T ss_pred HHHHHHCCCEEEechhhHHHHHHHHhC
Confidence 567889999999999999988876653
No 71
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=28.59 E-value=35 Score=29.25 Aligned_cols=18 Identities=28% Similarity=0.363 Sum_probs=15.0
Q ss_pred ceEEeecCceeEEEEeee
Q psy3290 3 WFGMDIGGTLSKLVYFEP 20 (147)
Q Consensus 3 ~faiDIGGTL~KlVYf~~ 20 (147)
.+|||+|.|-+|.+=|..
T Consensus 6 vlgID~GTss~Ka~l~d~ 23 (526)
T 3ezw_A 6 IVALDQGTTSSRAVVMDH 23 (526)
T ss_dssp EEEEEECSSEEEEEEECT
T ss_pred EEEEEccccceeeeEEcC
Confidence 379999999999877753
No 72
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=28.51 E-value=32 Score=29.83 Aligned_cols=19 Identities=21% Similarity=0.551 Sum_probs=15.7
Q ss_pred ceEEeecCceeEEEEeeeC
Q psy3290 3 WFGMDIGGTLSKLVYFEPK 21 (147)
Q Consensus 3 ~faiDIGGTL~KlVYf~~~ 21 (147)
.+|+|+|||-.+++-.+-.
T Consensus 61 ~LAlDlGGTn~RV~~V~l~ 79 (445)
T 3hm8_A 61 FLALDLGGTNFRVLLVRVT 79 (445)
T ss_dssp EEEEEESSSSEEEEEEEES
T ss_pred EEEEEecCCeEEEEEEEEC
Confidence 5899999999998777653
No 73
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=27.71 E-value=28 Score=29.29 Aligned_cols=20 Identities=20% Similarity=0.293 Sum_probs=16.3
Q ss_pred CceEEeecCceeEEEEeeeC
Q psy3290 2 PWFGMDIGGTLSKLVYFEPK 21 (147)
Q Consensus 2 p~faiDIGGTL~KlVYf~~~ 21 (147)
+.+|+|||.|-+|+|=-+..
T Consensus 9 ~ivglDIGts~I~~vv~~~~ 28 (419)
T 4a2a_A 9 FYTSIDIGSRYIKGLVLGKR 28 (419)
T ss_dssp EEEEEEECSSEEEEEEEEC-
T ss_pred EEEEEEccCCEEEEEEEEEc
Confidence 46899999999999877754
No 74
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=27.55 E-value=37 Score=30.46 Aligned_cols=20 Identities=30% Similarity=0.381 Sum_probs=17.7
Q ss_pred CCceEEeecCceeEEEEeee
Q psy3290 1 MPWFGMDIGGTLSKLVYFEP 20 (147)
Q Consensus 1 ~p~faiDIGGTL~KlVYf~~ 20 (147)
|..+|||.|.|-+++.|+..
T Consensus 2 m~~iGIDlGTtns~va~~~~ 21 (675)
T 3d2f_A 2 STPFGLDLGNNNSVLAVARN 21 (675)
T ss_dssp CCCEEEECCSSEEEEEEEET
T ss_pred CcEEEEEcCCCcEEEEEEEC
Confidence 66899999999999999864
No 75
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=26.54 E-value=43 Score=28.86 Aligned_cols=18 Identities=22% Similarity=0.340 Sum_probs=15.6
Q ss_pred ceEEeecCceeEEEEeee
Q psy3290 3 WFGMDIGGTLSKLVYFEP 20 (147)
Q Consensus 3 ~faiDIGGTL~KlVYf~~ 20 (147)
.+|||+|.|-+|.+=|..
T Consensus 12 ~lgID~GTts~Ka~l~d~ 29 (538)
T 4bc3_A 12 CLGWDFSTQQVKVVAVDA 29 (538)
T ss_dssp EEEEEECSSEEEEEEEET
T ss_pred EEEEEEcCcCEEEEEECC
Confidence 479999999999887764
No 76
>3c2i_A Methyl-CPG-binding protein 2; water mediated recognition; HET: DNA 5CM; 2.50A {Homo sapiens} PDB: 1qk9_A
Probab=24.22 E-value=26 Score=24.45 Aligned_cols=28 Identities=11% Similarity=0.226 Sum_probs=20.1
Q ss_pred eEEEEeeeCCCCCCchhhHHHHHHHHHHHhhhccc
Q psy3290 13 SKLVYFEPKDITPDEANSEIETLKNIRKYLTKNKA 47 (147)
Q Consensus 13 ~KlVYf~~~~~~~~~~~~e~~~l~~i~~~l~~n~~ 47 (147)
+=+.|++|.+ .+-+|..++.+||.+|..
T Consensus 44 ~DvYY~sP~G-------kkfRSk~ev~ryL~~~g~ 71 (97)
T 3c2i_A 44 YDVYLINPQG-------KAFRSKVELIMYFEKVGD 71 (97)
T ss_dssp EEEEEECTTS-------CEECSHHHHHHHHHHHTC
T ss_pred ceEEEECCCC-------CEEECHHHHHHHHHHCCC
Confidence 3477888854 356678889999988753
No 77
>1x9t_B N-terminl peptide of fiber protein; jellyroll domain, insertion domain, anti-parallel beta sheets, virus like particle/peptide complex; HET: C15; 3.50A {Human adenovirus 2}
Probab=22.07 E-value=27 Score=18.93 Aligned_cols=8 Identities=38% Similarity=1.053 Sum_probs=6.3
Q ss_pred CCCCCccc
Q psy3290 137 DFTNPYPF 144 (147)
Q Consensus 137 ~~~~~YPy 144 (147)
+|+-+|||
T Consensus 10 dFnPVYPY 17 (26)
T 1x9t_B 10 TFNPVYPY 17 (26)
T ss_pred cCcccccC
Confidence 57778998
No 78
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=21.48 E-value=53 Score=28.84 Aligned_cols=19 Identities=26% Similarity=0.413 Sum_probs=16.5
Q ss_pred CceEEeecCceeEEEEeee
Q psy3290 2 PWFGMDIGGTLSKLVYFEP 20 (147)
Q Consensus 2 p~faiDIGGTL~KlVYf~~ 20 (147)
+.+|||+|.|.++++|+.+
T Consensus 3 ~viGIDlGTt~s~va~~~~ 21 (605)
T 2kho_A 3 KIIGIDLGTTNSCVAIMDG 21 (605)
T ss_dssp -CEEEECCSSEEEEEEEET
T ss_pred CEEEEEcCCcCEEEEEEEC
Confidence 4689999999999999974
No 79
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=21.43 E-value=55 Score=28.73 Aligned_cols=19 Identities=26% Similarity=0.413 Sum_probs=16.9
Q ss_pred CceEEeecCceeEEEEeee
Q psy3290 2 PWFGMDIGGTLSKLVYFEP 20 (147)
Q Consensus 2 p~faiDIGGTL~KlVYf~~ 20 (147)
+.+|||.|.|.+++.|+.+
T Consensus 3 ~viGIDlGTT~S~Va~~~~ 21 (605)
T 4b9q_A 3 KIIGIDLGTTNSCVAIMDG 21 (605)
T ss_dssp CEEEEECCSSEEEEEEEET
T ss_pred cEEEEEcCCCcEEEEEEEC
Confidence 4689999999999999864
No 80
>2f9w_A Pantothenate kinase; COAA, transferase; HET: PAU; 1.90A {Pseudomonas aeruginosa} SCOP: c.55.1.13 c.55.1.13 PDB: 2f9t_A*
Probab=21.13 E-value=59 Score=26.06 Aligned_cols=18 Identities=28% Similarity=0.351 Sum_probs=16.2
Q ss_pred ceEEeecCceeEEEEeee
Q psy3290 3 WFGMDIGGTLSKLVYFEP 20 (147)
Q Consensus 3 ~faiDIGGTL~KlVYf~~ 20 (147)
.++||||=|-+|+..|++
T Consensus 25 ~L~IDiGNT~ik~g~~~~ 42 (271)
T 2f9w_A 25 ILELDCGNSLIKWRVIEG 42 (271)
T ss_dssp EEEEEECSSCEEEEEEET
T ss_pred EEEEEeCCCeeEEEEEeC
Confidence 489999999999999983
No 81
>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens}
Probab=20.93 E-value=81 Score=21.22 Aligned_cols=43 Identities=14% Similarity=0.091 Sum_probs=31.1
Q ss_pred cccceeeccee-eEEEEEecchhhHHHHHHHHHHHHHcCCceeeech
Q psy3290 55 DTHLQVLYTTL-TLLCIELISDDTVVDFIRVIMRIQEVNMKLEKCDE 100 (147)
Q Consensus 55 d~~le~~~~t~-~LhFikFeT~~~i~~fi~~~~f~~~lgv~l~k~DE 100 (147)
|.|+.+....+ +|+-+.+.+.+ +++.++| +++.||+++...++
T Consensus 15 ~~n~~m~~m~i~~i~hv~l~v~D-l~~a~~F--Y~~vLG~~~~~~~~ 58 (147)
T 3zw5_A 15 TENLYFQSMLIRRLDHIVMTVKS-IKDTTMF--YSKILGMEVMTFKE 58 (147)
T ss_dssp -CHHHHHHTSCEEEEEEEEEESC-HHHHHHH--HHHHHCCEEEEETT
T ss_pred ccceeecceecccccEEEEEeCC-HHHHHHH--HHHhcCCEEEecCC
Confidence 45555554333 89999999999 9998875 45679999886554
No 82
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=20.49 E-value=62 Score=26.40 Aligned_cols=17 Identities=35% Similarity=0.401 Sum_probs=15.2
Q ss_pred CceEEeecCceeEEEEe
Q psy3290 2 PWFGMDIGGTLSKLVYF 18 (147)
Q Consensus 2 p~faiDIGGTL~KlVYf 18 (147)
+-++||+|.+.+|+-|-
T Consensus 6 ~~ivID~Gs~~~k~G~~ 22 (418)
T 1k8k_A 6 PACVVDCGTGYTKLGYA 22 (418)
T ss_dssp CCEEEEECSSEEEEEET
T ss_pred CeEEEECCCCeEEEeeC
Confidence 56899999999999885
Done!