RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy3300
(97 letters)
>2kno_A Tensin-like C1 domain-containing phosphatase; SH2 domain, TENC1,
solution structure, cell junctio membrane, hydrolase,
membrane, metal-binding; NMR {Homo sapiens} PDB: 2l6k_A
Length = 131
Score = 96.5 bits (240), Expect = 1e-27
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 12/94 (12%)
Query: 8 EVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLG----------IAHYLILRTAKGY 57
+L + GAF++R+S + G + L+L+V + H+LI KG
Sbjct: 34 ALLKDKDPGAFLIRDSHSFQGAYGLALKVATPPPSAQPWKGDPVEQLVRHFLIETGPKGV 93
Query: 58 KIKGFTKE--FSSLTSLITHHSVMPELLPCTLSL 89
KIKG E F SL++L++ HS+ P LPC L +
Sbjct: 94 KIKGCPSEPYFGSLSALVSQHSISPISLPCCLRI 127
>1aot_F FYN protein-tyrosine kinase; SH2 domain, signal transduction,
peptide complex, complex (proto-oncogene/early protein);
HET: PTR; NMR {Homo sapiens} SCOP: d.93.1.1 PDB: 1aou_F*
Length = 106
Score = 73.1 bits (180), Expect = 1e-18
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Query: 14 PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKGFTKEFSSLTSL 72
P G F++RES T G ++LS+R + + HY I + G Y I + F +L L
Sbjct: 27 PRGTFLIRESETTKGAYSLSIRDWDDMKGDHVKHYKIRKLDNGGYYITTRAQ-FETLQQL 85
Query: 73 ITHHSVMPELLPCTL 87
+ H+S L L
Sbjct: 86 VQHYSERAAGLSSRL 100
>3eaz_A Tyrosine-protein kinase CSK; SH2, disulfide, oxidized reduced,
ATP-binding, cell membrane, cytoplasm, membrane,
nucleotide-binding, phosphoprotein; 1.31A {Homo
sapiens} PDB: 3eac_A
Length = 106
Score = 72.6 bits (179), Expect = 1e-18
Identities = 22/80 (27%), Positives = 33/80 (41%), Gaps = 6/80 (7%)
Query: 8 EVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFS 67
+L G F+VREST PG + L + + HY I+ A I F
Sbjct: 22 RLLYPPETGLFLVRESTNYPGDYTLCVS-----SDGKVEHYRIMYHASKLSIDEEVY-FE 75
Query: 68 SLTSLITHHSVMPELLPCTL 87
+L L+ H++ + L L
Sbjct: 76 NLMQLVEHYTSDADGLCTRL 95
>1lkk_A Human P56 tyrosine kinase; complex (tyrosine kinase/peptide);
HET: PTR; 1.00A {Homo sapiens} SCOP: d.93.1.1 PDB:
1lcj_A* 1bhf_A* 1bhh_A 1lkl_A* 1bhh_B 1fbz_A* 1ijr_A*
1cwd_L* 1cwe_A*
Length = 105
Score = 72.3 bits (178), Expect = 2e-18
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Query: 14 PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKGFTKEFSSLTSL 72
G+F++RES + G F+LS+R + + HY I G + I F L L
Sbjct: 26 THGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNLDNGGFYISPRIT-FPGLHEL 84
Query: 73 ITHHSVMPELLPCTL 87
+ H++ + L L
Sbjct: 85 VRHYTNASDGLCTRL 99
>3pqz_A Growth factor receptor-bound protein 7; SH2, binds phosphotyrosine,
tyrosine kinases, cytoplasmic, P binding; 2.41A {Homo
sapiens} PDB: 1mw4_A* 2l4k_A* 2qms_A
Length = 117
Score = 71.2 bits (175), Expect = 7e-18
Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 9/78 (11%)
Query: 14 PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKE----FSSL 69
G F+VRES P F LSL H + HYLIL + + ++ + F+ L
Sbjct: 36 VDGLFLVRESQRNPQGFVLSLC-----HLQKVKHYLILPSEEEGRLYFSMDDGQTRFTDL 90
Query: 70 TSLITHHSVMPELLPCTL 87
L+ H + +LPC L
Sbjct: 91 LQLVEFHQLNRGILPCLL 108
>2ecd_A Tyrosine-protein kinase ABL2; SH2 domain, phosphotyrosine binding
domain, protein tyrosine kinase, signal transduction,
structural genomics, NPPSFA; NMR {Homo sapiens}
Length = 119
Score = 70.4 bits (173), Expect = 1e-17
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 8 EVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKGFTKEF 66
+LS G+F+VRES + PG ++SLR + + HY I TA G + ++ F
Sbjct: 30 YLLSSLINGSFLVRESESSPGQLSISLR-----YEGRVYHYRINTTADGKVYVTAESR-F 83
Query: 67 SSLTSLITHHSVMPELLPCTL 87
S+L L+ HHS + + L TL
Sbjct: 84 STLAELVHHHSTVADGLVTTL 104
>3us4_A Megakaryocyte-associated tyrosine-protein kinase; SH2 domain,
signaling protein, structural genomics, joint CE
structural genomics, JCSG; 1.50A {Homo sapiens} PDB:
1jwo_A
Length = 98
Score = 69.5 bits (171), Expect = 2e-17
Identities = 19/80 (23%), Positives = 30/80 (37%), Gaps = 6/80 (7%)
Query: 8 EVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFS 67
+ L G F+VRES PG + L + + HY +L I F
Sbjct: 19 QQLQPPEDGLFLVRESARHPGDYVLCVS-----FGRDVIHYRVLHRDGHLTIDEAVF-FC 72
Query: 68 SLTSLITHHSVMPELLPCTL 87
+L ++ H+S + L
Sbjct: 73 NLMDMVEHYSKDKGAICTKL 92
>3tkz_A Tyrosine-protein phosphatase non-receptor type 11; SH2 domain,
protein protein interactions, PTR residues, HYDR
peptide complex; HET: PTR; 1.80A {Homo sapiens} PDB:
3tl0_A* 1aya_A* 1ayb_A* 1ayc_A* 1ayd_A
Length = 109
Score = 69.6 bits (171), Expect = 3e-17
Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 7/84 (8%)
Query: 8 EVLSQEPV-GAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEF 66
+L V G+F+ R S + PG F LS+R + + H I T Y + G K F
Sbjct: 21 NLLLTRGVDGSFLARPSKSNPGDFTLSVR-----RNGAVTHIKIQNTGDYYDLYGGEK-F 74
Query: 67 SSLTSLITHHSVMPELLPCTLSLH 90
++L L+ ++ L
Sbjct: 75 ATLAELVQYYMEHHGQLKEKNGDV 98
>1nrv_A Growth factor receptor-bound protein 10; dimer, signaling protein;
1.65A {Homo sapiens} SCOP: d.93.1.1 PDB: 3m7f_A
Length = 105
Score = 69.2 bits (170), Expect = 3e-17
Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 9/79 (11%)
Query: 14 PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG----YKIKGFTKEFSSL 69
G F++R+S + P F L+L HH I ++ IL + + +FS L
Sbjct: 27 VDGLFLLRDSQSNPKAFVLTLC-----HHQKIKNFQILPCEDDGQTFFSLDDGNTKFSDL 81
Query: 70 TSLITHHSVMPELLPCTLS 88
L+ + + +LPC L
Sbjct: 82 IQLVDFYQLNKGVLPCKLK 100
>3k2m_A Proto-oncogene tyrosine-protein kinase ABL1; engineered binding
protein, antibody mimic, protein-protein SH2 domain,
ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB:
3uyo_A 3t04_A 1ab2_A
Length = 112
Score = 68.4 bits (168), Expect = 7e-17
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 7/81 (8%)
Query: 8 EVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKGFTKEF 66
+LS G+F+VRES + PG ++SLR + + HY I + G + ++ F
Sbjct: 19 YLLSSGINGSFLVRESESSPGQRSISLR-----YEGRVYHYRINTASDGKLYVSSESR-F 72
Query: 67 SSLTSLITHHSVMPELLPCTL 87
++L L+ HHS + + L TL
Sbjct: 73 NTLAELVHHHSTVADGLITTL 93
>2ysx_A Signaling inositol polyphosphate phosphatase SHIP II; SH2 domain,
phosphotyrosine binding domain, protein tyrosine kinase,
signal transduction; NMR {Homo sapiens}
Length = 119
Score = 68.5 bits (168), Expect = 9e-17
Identities = 19/86 (22%), Positives = 31/86 (36%), Gaps = 11/86 (12%)
Query: 8 EVLSQEPV-GAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGY-----KIKG 61
E+LS+ G+F+VR S + +AL + + + Y IL
Sbjct: 24 ELLSRTGKDGSFLVRASESISRAYALCVL-----YRNCVYTYRILPNEDDKFTVQASEGV 78
Query: 62 FTKEFSSLTSLITHHSVMPELLPCTL 87
+ F+ L LI + L L
Sbjct: 79 SMRFFTKLDQLIEFYKKENMGLVTHL 104
>2dly_A FYN-related kinase; BRK family kinase, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Mus musculus}
Length = 121
Score = 68.5 bits (168), Expect = 1e-16
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 7/75 (9%)
Query: 14 PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKGFTKEFSSLTSL 72
GAF++RES ++ G F+LS+ + HY I R +G + + FS+L
Sbjct: 38 QTGAFLIRESESQKGDFSLSVL-----DEGVVKHYRIRRLDEGGFFLTRRKV-FSTLNEF 91
Query: 73 ITHHSVMPELLPCTL 87
+ +++ + L L
Sbjct: 92 VNYYTTTSDGLCVKL 106
>2aug_A Growth factor receptor-bound protein 14; phosphorylation, SH2
domain, signaling protein; 2.30A {Homo sapiens}
Length = 126
Score = 67.0 bits (164), Expect = 4e-16
Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 9/78 (11%)
Query: 14 PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKE----FSSL 69
G F+VR+S + P F LS+ H I H+ I+ ++ + F+ L
Sbjct: 48 VDGVFLVRDSQSNPKTFVLSMS-----HGQKIKHFQIIPVEDDGEMFHTLDDGHTRFTDL 102
Query: 70 TSLITHHSVMPELLPCTL 87
L+ + + +LPC L
Sbjct: 103 IQLVEFYQLNKGVLPCKL 120
>3ov1_A Growth factor receptor-bound protein 2; GRB2 SH2 domain,
phosphotyrosine binding, signaling protein, signaling
protein-antagonist complex; HET: PTR; 1.60A {Homo
sapiens} PDB: 3imj_A* 3in7_A* 3imd_A* 3kfj_A* 3n8m_A*
3in8_A* 3s8l_A* 3s8n_A* 3s8o_A* 2huy_A* 2h5k_A* 2huw_A*
2h46_E* 3c7i_A* 3n84_A* 1fhs_A 1bm2_A* 1bmb_A* 3ove_A*
1fyr_A* ...
Length = 117
Score = 66.9 bits (164), Expect = 4e-16
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 7/88 (7%)
Query: 8 EVLSQE-PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEF 66
E+LS++ GAF++RES + PG F+LS++ + H+ +LR G K F
Sbjct: 20 EMLSKQRHDGAFLIRESESAPGDFSLSVK-----FGNDVQHFKVLRDGAGKYFLWVVK-F 73
Query: 67 SSLTSLITHHSVMPELLPCTLSLHRYNP 94
+SL L+ +H + L
Sbjct: 74 NSLNELVDYHRSTSVSRNQQIFLRDIEQ 101
>2gsb_A RAS GTPase-activating protein 1; GAP, RAS P21 protein activator,
P120GAP, rasgap, structural genomics, NPPSFA; NMR {Homo
sapiens}
Length = 119
Score = 66.5 bits (163), Expect = 5e-16
Identities = 17/78 (21%), Positives = 32/78 (41%), Gaps = 6/78 (7%)
Query: 10 LSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSL 69
++ V +F+VR S PG ++L R + I + I T + G ++S+
Sbjct: 33 MTVGQVCSFLVRPSDNTPGDYSLYFR-----TNENIQRFKICPTPNNQFMMGGRY-YNSI 86
Query: 70 TSLITHHSVMPELLPCTL 87
+I H+ + L
Sbjct: 87 GDIIDHYRKEQIVEGYYL 104
>1rja_A Tyrosine-protein kinase 6; human protein tyrosine kinase-6
(PTK6/BRK), SRC homology 2(S domain, solution
structure, backbone dynamics, transferase; NMR {Homo
sapiens} SCOP: d.93.1.1
Length = 100
Score = 66.0 bits (162), Expect = 5e-16
Identities = 20/75 (26%), Positives = 28/75 (37%), Gaps = 7/75 (9%)
Query: 14 PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKGFTKEFSSLTSL 72
GAF++R S + LS+R + HY I R A G + F SL L
Sbjct: 24 ATGAFLIRVSEKPSADYVLSVR-----DTQAVRHYKIWRRAGGRLHLNEAVS-FLSLPEL 77
Query: 73 ITHHSVMPELLPCTL 87
+ +H L
Sbjct: 78 VNYHRAQSLSHGLRL 92
>2dlz_A Protein VAV-2; RHO family guanine nucleotide exchange factor,
structural genomics, NPPSFA; NMR {Homo sapiens}
Length = 118
Score = 66.5 bits (163), Expect = 6e-16
Identities = 15/73 (20%), Positives = 29/73 (39%), Gaps = 6/73 (8%)
Query: 8 EVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFS 67
+L G +++RE + FA+S++ E + H ++ I K F
Sbjct: 30 NLLKSHASGTYLIRERPAEAERFAISIKFNDE-----VKHIKVVEKDNWIHITEAKK-FD 83
Query: 68 SLTSLITHHSVMP 80
SL L+ ++
Sbjct: 84 SLLELVEYYQCHS 96
>1i3z_A EWS/FLI1 activated transcript 2; SH2 domain phosphotyrosine
signal transduction lymphocyte, signaling protein; HET:
PTR; 2.15A {Mus musculus} SCOP: d.93.1.1
Length = 103
Score = 65.8 bits (161), Expect = 7e-16
Identities = 18/83 (21%), Positives = 29/83 (34%), Gaps = 10/83 (12%)
Query: 10 LSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGY-----KIKGFTK 64
L G F++R+S + PG L + + Y I R GY
Sbjct: 20 LKGGVDGNFLIRDSESVPGALCLCVS-----FKKLVYSYRIFREKHGYYRIETDAHTPRT 74
Query: 65 EFSSLTSLITHHSVMPELLPCTL 87
F +L L++ + + L L
Sbjct: 75 IFPNLQELVSKYGKPGQGLVVHL 97
>2eo3_A CRK-like protein; phosphorylation, repeat, SH2 domain, SH3 domain,
structural genomics, NPPSFA; NMR {Homo sapiens}
Length = 111
Score = 65.4 bits (160), Expect = 1e-15
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 7/80 (8%)
Query: 8 EVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFS 67
L + G F+VR+S+T PG + LS+ + ++HY+I G +EF
Sbjct: 33 TRLQGQRHGMFLVRDSSTCPGDYVLSVS-----ENSRVSHYIINSLPNRRFKIG-DQEFD 86
Query: 68 SLTSLITHHSVMPELLPCTL 87
L +L+ + + L TL
Sbjct: 87 HLPALLEFYKIHY-LDTTTL 105
>1r1p_A GRB2-related adaptor protein 2; SH2, GADS, phosphopeptide,
peptide binding protein; HET: PTR; 1.80A {Mus musculus}
SCOP: d.93.1.1 PDB: 1r1q_A* 1r1s_A*
Length = 100
Score = 64.9 bits (159), Expect = 1e-15
Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 6/73 (8%)
Query: 8 EVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFS 67
+L + +G F++R S + PG F++S+R H + H+ ++R KG T++F
Sbjct: 23 NLLMGKDIGFFIIRASQSSPGDFSISVR-----HEDDVQHFKVMRDTKGNYFLW-TEKFP 76
Query: 68 SLTSLITHHSVMP 80
SL L+ ++
Sbjct: 77 SLNKLVDYYRTTS 89
>1blj_A P55 BLK protein tyrosine kinase; signal transduction, transferase,
phosphotransferase, phosphorylation; NMR {Mus musculus}
SCOP: d.93.1.1 PDB: 1blk_A
Length = 114
Score = 65.1 bits (159), Expect = 2e-15
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Query: 14 PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKGFTKEFSSLTSL 72
G+F++RES + G F+LS++ + HY I G Y I F +L +L
Sbjct: 34 KAGSFLIRESESNKGAFSLSVKDITTQGE-VVKHYKIRSLDNGGYYISPRIT-FPTLQAL 91
Query: 73 ITHHSVMPELLPCTL 87
+ H+S + L L
Sbjct: 92 VQHYSKKGDGLCQKL 106
>2y3a_B Phosphatidylinositol 3-kinase regulatory subunit; transferase,
phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus
musculus}
Length = 302
Score = 68.2 bits (166), Expect = 2e-15
Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 11/85 (12%)
Query: 8 EVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFS 67
E+LS + G F++RES+ GC+A S+ V + H +I RTA G+ +
Sbjct: 208 EMLSGKRDGTFLIRESSQ-RGCYACSVVVDGDTKH-----CVIYRTATGFGFAEPYNLYG 261
Query: 68 SLTSLITHHSVMP-----ELLPCTL 87
SL L+ H+ + L TL
Sbjct: 262 SLKELVLHYQHASLVQHNDALTVTL 286
>2cs0_A Hematopoietic SH2 domain containing; ALX, FLJ14886, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
d.93.1.1
Length = 119
Score = 65.0 bits (159), Expect = 2e-15
Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 7/81 (8%)
Query: 8 EVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKGFTKEF 66
+L +P+G+F++R S + G + LS + H+++ G + I G
Sbjct: 30 NLLESQPLGSFLIRVSHSHVG-YTLSYK-----AQSSCCHFMVKLLDDGTFMIPGEKVAH 83
Query: 67 SSLTSLITHHSVMPELLPCTL 87
+SL +L+T H P L
Sbjct: 84 TSLDALVTFHQQKPIEPRREL 104
>1ka6_A SH2 domain protein 1A; SH2 domain, protein-peptide complex,
immune system; HET: PTR; NMR {Homo sapiens} SCOP:
d.93.1.1 PDB: 1ka7_A
Length = 128
Score = 64.4 bits (157), Expect = 5e-15
Identities = 16/83 (19%), Positives = 35/83 (42%), Gaps = 10/83 (12%)
Query: 10 LSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKGFTKE--- 65
L+ G++++R+S + PG + L + +H I Y + +T G + +
Sbjct: 21 LATGLDGSYLLRDSESVPGVYCLCVL-----YHGYIYTYRVSQTETGSWSAETAPGVHKR 75
Query: 66 -FSSLTSLITHHSVMPELLPCTL 87
F + +LI+ + + L
Sbjct: 76 YFRKIKNLISAFQKPDQGIVIPL 98
>1h9o_A Phosphatidylinositol 3-kinase; transferase/receptor, complex
(phosphotransferase/receptor), phosphotransferase, SH2
domain; HET: PTR; 1.79A {Homo sapiens} SCOP: d.93.1.1
PDB: 1pic_A* 1bfi_A 1bfj_A 1qad_A
Length = 112
Score = 63.9 bits (156), Expect = 5e-15
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 11/85 (12%)
Query: 8 EVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFS 67
+L + G F+VRES+ GC+A S+ V E + H +I +TA GY +S
Sbjct: 24 NLLRGKRDGTFLVRESSK-QGCYACSVVVDGE-----VKHCVINKTATGYGFAEPYNLYS 77
Query: 68 SLTSLITHHSVMP-----ELLPCTL 87
SL L+ H+ + L TL
Sbjct: 78 SLKELVLHYQHTSLVQHNDSLNVTL 102
>1d4t_A T cell signal transduction molecule SAP; SH2 domain, tyrosine
kinase, signal transduction, peptide recognition,
signaling protein; 1.10A {Homo sapiens} SCOP: d.93.1.1
PDB: 1d1z_A 1d4w_A* 1m27_A*
Length = 104
Score = 63.5 bits (155), Expect = 6e-15
Identities = 16/83 (19%), Positives = 35/83 (42%), Gaps = 10/83 (12%)
Query: 10 LSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKGFTKE--- 65
L+ G++++R+S + PG + L + +H I Y + +T G + +
Sbjct: 21 LATGLDGSYLLRDSESVPGVYCLCVL-----YHGYIYTYRVSQTETGSWSAETAPGVHKR 75
Query: 66 -FSSLTSLITHHSVMPELLPCTL 87
F + +LI+ + + L
Sbjct: 76 YFRKIKNLISAFQKPDQGIVIPL 98
>2ekx_A Cytoplasmic tyrosine-protein kinase BMX; SH2 domain,
phosphotyrosine binding domain, protein tyrosine kinase,
signal transduction; NMR {Homo sapiens}
Length = 110
Score = 63.4 bits (155), Expect = 7e-15
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 7/84 (8%)
Query: 8 EVLSQE-PVGAFMVRESTTKPGCFALSLRVPKEFHHLG-IAHYLILRTAKG--YKIKGFT 63
++L Q+ GAFMVR S+ G + +SL G + HY + A+ Y + +
Sbjct: 25 QLLRQKGKEGAFMVRNSSQ-VGMYTVSLFSKAVNDKKGTVKHYHVHTNAENKLYLAENYC 83
Query: 64 KEFSSLTSLITHHSVMPELLPCTL 87
F S+ LI +H + L
Sbjct: 84 --FDSIPKLIHYHQHNSAGMITRL 105
>1a81_A SYK kinase; complex (transferase-peptide), SYK, kinase, SH2 domain;
HET: PTR; 3.00A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1
PDB: 1csy_A* 1csz_A*
Length = 254
Score = 66.5 bits (162), Expect = 7e-15
Identities = 27/91 (29%), Positives = 36/91 (39%), Gaps = 9/91 (9%)
Query: 8 EVLSQE--PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKGFTK 64
+ L Q G +++R+S G FALS+ H HY I R G Y I G
Sbjct: 19 DYLVQGGMSDGLYLLRQSRNYLGGFALSVA-----HGRKAHHYTIERELNGTYAIAGGRT 73
Query: 65 EFSSLTSLITHHSVMPELLPCTLSLHRYNPN 95
+S L +HS + L C L P
Sbjct: 74 -HASPADLCHYHSQESDGLVCLLKKPFNRPQ 103
Score = 60.3 bits (146), Expect = 1e-12
Identities = 20/75 (26%), Positives = 30/75 (40%), Gaps = 8/75 (10%)
Query: 14 PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKGFTKEFSSLTSL 72
G F++R G +AL L + + HY I + G I K F +L L
Sbjct: 180 TNGKFLIRARDN-NGSYALCLLHEGK-----VLHYRIDKDKTGKLSIPEGKK-FDTLWQL 232
Query: 73 ITHHSVMPELLPCTL 87
+ H+S + L L
Sbjct: 233 VEHYSYKADGLLRVL 247
>2crh_A VAV proto-oncogene; oncoprotein, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} PDB: 2ror_A* 2lct_A*
Length = 138
Score = 64.3 bits (157), Expect = 7e-15
Identities = 17/70 (24%), Positives = 32/70 (45%), Gaps = 6/70 (8%)
Query: 8 EVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFS 67
+L+ G F+VR+ FA+S++ +++ + H I+ Y+I K F
Sbjct: 40 SILANRSDGTFLVRQRVKDAAEFAISIK-----YNVEVKHIKIMTAEGLYRITE-KKAFR 93
Query: 68 SLTSLITHHS 77
LT L+ +
Sbjct: 94 GLTELVEFYQ 103
>2oq1_A Tyrosine-protein kinase ZAP-70; tandem SH2 domains, ZAP-70,
tyrosine kinase, transferase; HET: PTR; 1.90A {Homo
sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1m61_A
Length = 254
Score = 66.1 bits (161), Expect = 8e-15
Identities = 24/84 (28%), Positives = 33/84 (39%), Gaps = 7/84 (8%)
Query: 14 PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKGFTKEFSSLTSL 72
G F++R+ G + LSL H + H+ I R G Y I G K L
Sbjct: 28 ADGLFLLRQCLRSLGGYVLSLV-----HDVRFHHFPIERQLNGTYAIAG-GKAHCGPAEL 81
Query: 73 ITHHSVMPELLPCTLSLHRYNPNF 96
+S P+ LPC L P+
Sbjct: 82 CEFYSRDPDGLPCNLRKPCNRPSG 105
Score = 62.6 bits (152), Expect = 2e-13
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 8/75 (10%)
Query: 14 PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKGFTKEFSSLTSL 72
G F++R G +ALSL + + HYLI + G Y I TK F +L L
Sbjct: 181 TDGKFLLRPRKE-QGTYALSLI-----YGKTVYHYLISQDKAGKYCIPEGTK-FDTLWQL 233
Query: 73 ITHHSVMPELLPCTL 87
+ + + + L L
Sbjct: 234 VEYLKLKADGLIYCL 248
>1jyr_A Growth factor receptor-bound protein 2; receptor binding,
regulatory, inhibitor, signaling protein-I complex;
HET: PTR; 1.55A {Homo sapiens} SCOP: d.93.1.1 PDB:
1jyq_A* 1jyu_A 1qg1_E* 1x0n_A* 2aob_A* 2aoa_A* 3n7y_A*
1tze_E* 1zfp_E* 3mxc_A* 3mxy_A* 1cj1_A*
Length = 96
Score = 62.6 bits (153), Expect = 9e-15
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Query: 8 EVLSQE-PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEF 66
E+LS++ GAF++RES + PG F+LS++ + H+ +LR G K F
Sbjct: 17 EMLSKQRHDGAFLIRESESAPGDFSLSVK-----FGNDVQHFKVLRDGAGKYFLWVVK-F 70
Query: 67 SSLTSLITHHSVMPELLPCTLSL 89
+SL L+ +H + L
Sbjct: 71 NSLNELVDYHRSTSVSRNQQIFL 93
>2dm0_A Tyrosine-protein kinase TXK; TEC family kinase, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 125
Score = 63.5 bits (155), Expect = 9e-15
Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 5/83 (6%)
Query: 8 EVLSQE-PVGAFMVRESTTKPGCFALSLRVPKEFHHLG-IAHYLILRTAKG-YKIKGFTK 64
+L QE GAF+VR+S G + +S+ + I HY I + G + +
Sbjct: 30 HLLRQESKEGAFIVRDSRH-LGSYTISVFMGARRSTEAAIKHYQIKKNDSGQWYVAERHA 88
Query: 65 EFSSLTSLITHHSVMPELLPCTL 87
F S+ LI +H L L
Sbjct: 89 -FQSIPELIWYHQHNAAGLMTRL 110
>2ge9_A Tyrosine-protein kinase BTK; SH2 domain, structure, transferase;
NMR {Homo sapiens}
Length = 125
Score = 63.1 bits (154), Expect = 1e-14
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 5/83 (6%)
Query: 8 EVLSQE-PVGAFMVRESTTKPGCFALSLRVPKEFHHLG-IAHYLILRTAKG-YKIKGFTK 64
++L QE G F+VR+S+ G + +S+ G I HY++ T + Y +
Sbjct: 25 QLLKQEGKEGGFIVRDSSK-AGKYTVSVFAKSTGDPQGVIRHYVVCSTPQSQYYLAEKHL 83
Query: 65 EFSSLTSLITHHSVMPELLPCTL 87
FS++ LI +H L L
Sbjct: 84 -FSTIPELINYHQHNSAGLISRL 105
>2cia_A Cytoplasmic protein NCK2; SH2-domain, SH3 domain,
phosphorylation, binding specificity; HET: PTR MPD;
1.45A {Homo sapiens} PDB: 1z3k_A 2ci9_A* 2ci8_A*
Length = 102
Score = 60.7 bits (148), Expect = 6e-14
Identities = 17/74 (22%), Positives = 33/74 (44%), Gaps = 8/74 (10%)
Query: 8 EVLSQEPV-GAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEF 66
L++ V G F++R+S + P F++SL+ H+ + Y I + F
Sbjct: 19 CALNERGVEGDFLIRDSESSPSDFSVSLK-----ASGKNKHFKVQLVDNVYCIGQ--RRF 71
Query: 67 SSLTSLITHHSVMP 80
++ L+ H+ P
Sbjct: 72 HTMDELVEHYKKAP 85
>3gqi_B Phospholipase C-gamma-1; phosphorylated kinase, PY-recognition,
tandem SH2 domains, A analog, ATP-binding,
craniosynostosis, disease mutation; HET: PTR DVT ACP;
2.50A {Rattus norvegicus} PDB: 2fci_A* 2pld_A* 2ple_A*
Length = 226
Score = 63.4 bits (154), Expect = 7e-14
Identities = 21/81 (25%), Positives = 35/81 (43%), Gaps = 9/81 (11%)
Query: 8 EVLSQEPV-GAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEF 66
+L + P GAF+VR+ P +A+S R + I H + + + + EF
Sbjct: 136 HMLMRVPRDGAFLVRKRNE-PNSYAISFRAEGK-----IKHCRVQQEGQTVMLGN--SEF 187
Query: 67 SSLTSLITHHSVMPELLPCTL 87
SL LI+++ P L
Sbjct: 188 DSLVDLISYYEKHPLYRKMKL 208
Score = 52.2 bits (125), Expect = 9e-10
Identities = 23/84 (27%), Positives = 29/84 (34%), Gaps = 8/84 (9%)
Query: 14 PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGF---TKEFSSLT 70
P G+F+VRES T G + LS + H I K F F SL
Sbjct: 35 PDGSFLVRESETFVGDYTLSFWRNGKVQ-----HCRIHSRQDAGTPKFFLTDNLVFDSLY 89
Query: 71 SLITHHSVMPELLPCTLSLHRYNP 94
LITH+ +P
Sbjct: 90 DLITHYQQVPLRCNEFEMRLSEPV 113
>2kk6_A Proto-oncogene tyrosine-protein kinase FER; methods development,
SH2, NESG, ATP-binding, cytoplasm, nucleotide-binding,
nucleus, phosphoprotein; NMR {Homo sapiens}
Length = 116
Score = 60.8 bits (148), Expect = 1e-13
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 9/87 (10%)
Query: 8 EVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFS 67
E+L ++ G F+VRES KPG + LS+ H++I Y+ +G FS
Sbjct: 31 ELLKKQ--GDFLVRESHGKPGEYVLSVY-----SDGQRRHFIIQYVDNMYRFEG--TGFS 81
Query: 68 SLTSLITHHSVMPELLPCTLSLHRYNP 94
++ LI HH +++ + NP
Sbjct: 82 NIPQLIDHHYTTKQVITKKSGVVLLNP 108
>2hdv_A SH2-B PH domain containing signaling mediator 1 gamma isoform;
adapter protein, signaling protein; 2.00A {Mus musculus}
PDB: 2hdx_A* 1rpy_A 1rqq_C*
Length = 111
Score = 60.4 bits (147), Expect = 1e-13
Identities = 18/84 (21%), Positives = 27/84 (32%), Gaps = 6/84 (7%)
Query: 7 LEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEF 66
+ G F+VR+S T+ G L+ H + A G F
Sbjct: 25 VLEGGTGSHGVFLVRQSETRRGECVLTFN-----FQGKAKHLRLSLNAAGQCRVQHLH-F 78
Query: 67 SSLTSLITHHSVMPELLPCTLSLH 90
S+ ++ H V P L S
Sbjct: 79 QSIFDMLEHFRVHPIPLESGGSSD 102
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase,
transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP:
b.34.2.1 d.93.1.1 d.144.1.7
Length = 535
Score = 63.7 bits (155), Expect = 1e-13
Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Query: 7 LEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG--YKIKGFTK 64
L + ++ P G F+VRES T G + LS+ L + HY I + G Y
Sbjct: 163 LLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQ- 221
Query: 65 EFSSLTSLITHHSVMPELLPCTLS 88
F+SL L+ ++S + L L+
Sbjct: 222 -FNSLQQLVAYYSKHADGLCHRLT 244
>2eob_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 2;
SH2, phosphoinositide phospholipase C, PLC-gamma-2,
phospholipase C-gamma-2; NMR {Rattus norvegicus}
Length = 124
Score = 60.4 bits (147), Expect = 2e-13
Identities = 17/81 (20%), Positives = 36/81 (44%), Gaps = 8/81 (9%)
Query: 8 EVLSQEPV-GAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEF 66
++L + P GAF++R+ +A++ R + + H I R + + + G + F
Sbjct: 33 DMLMRIPRDGAFLIRKREG-TDSYAITFRARGK-----VKHCRINRDGRHFVL-GTSAYF 85
Query: 67 SSLTSLITHHSVMPELLPCTL 87
SL L++++ L
Sbjct: 86 ESLVELVSYYEKHALYRKMRL 106
>2bbu_A Suppressor of cytokine signaling 3; SH2 domain, extended SH2
subdomain, PEST motif, protein complex, cytokine
regulator; HET: PTR; NMR {Mus musculus}
Length = 164
Score = 61.2 bits (148), Expect = 2e-13
Identities = 18/83 (21%), Positives = 32/83 (38%), Gaps = 1/83 (1%)
Query: 8 EVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLIL-RTAKGYKIKGFTKEF 66
+LS EP G F++R+S+ + F LS++ +L I + F
Sbjct: 37 LLLSAEPAGTFLIRDSSDQRHFFTLSVKTQSGTKNLRIQCEGGSFSLQSDPRSTQPVPRF 96
Query: 67 SSLTSLITHHSVMPELLPCTLSL 89
+ L+ H+ P +L
Sbjct: 97 DCVLKLVHHYMPPPGTPSFSLPP 119
>3s9k_A Tyrosine-protein kinase ITK/TSK; proline isomerization, CIS
proline, domain swapped dimer, SH transferase; HET: CIT;
2.35A {Mus musculus} PDB: 2etz_A* 2eu0_A* 1lui_A 1luk_A
1lum_A 1lun_A 2k79_B 2k7a_B
Length = 118
Score = 58.9 bits (143), Expect = 5e-13
Identities = 25/82 (30%), Positives = 33/82 (40%), Gaps = 6/82 (7%)
Query: 10 LSQEPVGAFMVRESTTKPGCFALSLRVP-KEFHHLGIAHYLILRTAKG---YKIKGFTKE 65
L GAFMVR+S T PG + +S+ + I HY I T Y +
Sbjct: 26 LDTGKEGAFMVRDSRT-PGTYTVSVFTKAIISENPCIKHYHIKETNDSPKRYYVAEKYV- 83
Query: 66 FSSLTSLITHHSVMPELLPCTL 87
F S+ LI +H L L
Sbjct: 84 FDSIPLLIQYHQYNGGGLVTRL 105
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1;
transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP:
b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Length = 495
Score = 62.1 bits (151), Expect = 5e-13
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Query: 10 LSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSL 69
LS G+F+VRES + PG ++SLR + + HY I + G F++L
Sbjct: 121 LSSGINGSFLVRESESSPGQRSISLR-----YEGRVYHYRINTASDGKLYVSSESRFNTL 175
Query: 70 TSLITHHSVMPELLPCTLS 88
L+ HHS + + L TL
Sbjct: 176 AELVHHHSTVADGLITTLH 194
>2vif_A Suppressor of cytokine signalling 6; growth regulation, signal
transduction inhibitor, KIT regula phosphotyrosine,
signaling protein; HET: PTR; 1.45A {Homo sapiens}
Length = 141
Score = 58.7 bits (142), Expect = 9e-13
Identities = 19/90 (21%), Positives = 33/90 (36%), Gaps = 7/90 (7%)
Query: 8 EVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKI--KGFTKE 65
L+ P G+F+VR+S+ +LS R + H I + + + +
Sbjct: 38 GKLANVPDGSFLVRDSSDDRYLLSLSFRSHGKTL-----HTRIEHSNGRFSFYEQPDVEG 92
Query: 66 FSSLTSLITHHSVMPELLPCTLSLHRYNPN 95
+S+ LI H E S R +
Sbjct: 93 HTSIVDLIEHSIGDSENGAFCYSRSRLPGS 122
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase,
phosphorylation, SH2, SH3, phosphotyrosine,
proto-oncogene, phosphotransferase; HET: PTR; 1.50A
{Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB:
1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B*
3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A*
3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Length = 452
Score = 60.9 bits (148), Expect = 1e-12
Identities = 24/82 (29%), Positives = 39/82 (47%)
Query: 7 LEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEF 66
L + ++ P G F+VRES T G + LS+ L + HY I + G +F
Sbjct: 80 LLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQF 139
Query: 67 SSLTSLITHHSVMPELLPCTLS 88
+SL L+ ++S + L L+
Sbjct: 140 NSLQQLVAYYSKHADGLCHRLT 161
>1ju5_A CRK; CRK, SH2, SH3, adaptor protein, phosphopeptide, protein
binding/transferase complex; HET: PTR; NMR {Homo
sapiens} SCOP: d.93.1.1
Length = 109
Score = 57.2 bits (138), Expect = 2e-12
Identities = 22/96 (22%), Positives = 40/96 (41%), Gaps = 22/96 (22%)
Query: 8 EVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFT---- 63
+L + G F+VR+S+T PG + LS+ + ++HY+I + +
Sbjct: 14 ALLQGQRHGVFLVRDSSTSPGDYVLSVS-----ENSRVSHYIINSSGPRPPVPPSPAQPP 68
Query: 64 ------------KEFSSLTSLITHHSVMPELLPCTL 87
+EF SL +L+ + + L TL
Sbjct: 69 PGVSPSRLRIGDQEFDSLPALLEFYKIHY-LDTTTL 103
>2dx0_A Phospholipase C, gamma 2; phosphoric diester hydrolase, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; 2.50A {Mus musculus}
Length = 138
Score = 57.6 bits (139), Expect = 3e-12
Identities = 23/88 (26%), Positives = 35/88 (39%), Gaps = 11/88 (12%)
Query: 14 PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKE---FSSLT 70
G F+VRES T P + LS + H I T + +K + + F+S+
Sbjct: 49 KDGTFLVRESETFPNDYTLSFW-----RSGRVQHCRIRSTMENGVMKYYLTDNLTFNSIY 103
Query: 71 SLITHHSVMPEL---LPCTLSLHRYNPN 95
+LI H+ L+ NPN
Sbjct: 104 ALIQHYREAHLRCAEFELRLTDPVPNPN 131
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex,
DOWN-regulated kinase, ordered activation loop; HET: PTR
PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1
d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A*
3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Length = 454
Score = 59.7 bits (145), Expect = 3e-12
Identities = 22/73 (30%), Positives = 33/73 (45%)
Query: 16 GAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITH 75
G+FM+R+S T G ++LS+R + HY I G FS+L L+ H
Sbjct: 94 GSFMIRDSETTKGSYSLSVRDYDPRQGDTVKHYKIRTLDNGGFYISPRSTFSTLQELVDH 153
Query: 76 HSVMPELLPCTLS 88
+ + L LS
Sbjct: 154 YKKGNDGLCQKLS 166
>1mil_A SHC adaptor protein; SH2 domain, phosphorylation, collagen,
growth regulation, transforming protein, alternative
initiation; 2.70A {Homo sapiens} SCOP: d.93.1.1 PDB:
1tce_A*
Length = 104
Score = 56.5 bits (137), Expect = 3e-12
Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 7/73 (9%)
Query: 16 GAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITH 75
G F+VRESTT PG + L+ + H L++ + K F S++ LI++
Sbjct: 27 GDFLVRESTTTPGQYVLTGLQSGQPK-----HLLLVDPEGVVRTKD--HRFESVSHLISY 79
Query: 76 HSVMPELLPCTLS 88
H + S
Sbjct: 80 HMDNHLPIISAGS 92
>3maz_A Signal-transducing adaptor protein 1; modular domain,
phosphotyrosine, specificity, cytoplasm,
phosphoprotein, SH2 domain, signaling protein; HET:
PTR; 1.90A {Homo sapiens}
Length = 125
Score = 56.7 bits (137), Expect = 4e-12
Identities = 15/72 (20%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Query: 8 EVLSQEP-VGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKE- 65
E+L + P +G ++R + +++++R +E I HY ++ + Y I+
Sbjct: 29 EMLQKNPSLGNMILRPGSD-SRNYSITIR--QEIDIPRIKHYKVMSVGQNYTIELEKPVT 85
Query: 66 FSSLTSLITHHS 77
+L S+I +
Sbjct: 86 LPNLFSVIDYFV 97
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2,
autoinhibition, ITAM, hydrogen bonding network, TCR
signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Length = 613
Score = 58.8 bits (142), Expect = 7e-12
Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 7/73 (9%)
Query: 16 GAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKGFTKEFSSLTSLIT 74
G F++R+ G + LSL H + H+ I R G Y I G K L
Sbjct: 32 GLFLLRQCLRSLGGYVLSLV-----HDVRFHHFPIERQLNGTYAIAG-GKAHCGPAELCE 85
Query: 75 HHSVMPELLPCTL 87
+S P+ LPC L
Sbjct: 86 FYSRDPDGLPCNL 98
Score = 47.2 bits (112), Expect = 9e-08
Identities = 19/82 (23%), Positives = 32/82 (39%), Gaps = 6/82 (7%)
Query: 16 GAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITH 75
G F++R G +ALSL + + HYLI + G +F +L L+ +
Sbjct: 185 GKFLLRPRKE-QGTYALSLI-----YGKTVYHYLISQDKAGKYCIPEGTKFDTLWQLVEY 238
Query: 76 HSVMPELLPCTLSLHRYNPNFE 97
+ + L L N +
Sbjct: 239 LKLKADGLIYCLKEACPNSSAS 260
>4d8k_A Tyrosine-protein kinase LCK; protein kinases, SH2 domain, SH3
domain, structural genomics center for structural
genomics, JCSG; 2.36A {Homo sapiens} PDB: 1lck_A*
1x27_A*
Length = 175
Score = 57.4 bits (138), Expect = 7e-12
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Query: 14 PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKGFTKEFSSLTSL 72
G+F++RES + G F+LS+R + + HY I G + I F L L
Sbjct: 96 THGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNLDNGGFYISPRIT-FPGLHEL 154
Query: 73 ITHHSVMPELLPCTL 87
+ H++ + L L
Sbjct: 155 VRHYTNASDGLCTRL 169
>2izv_A Suppressor of cytokine signaling 4; signal transduction inhibitor,
growth regulation, signal transduction, SH2 domain,
nuclear protein; 2.55A {Homo sapiens} SCOP: a.271.1.1
d.93.1.1
Length = 187
Score = 57.2 bits (138), Expect = 9e-12
Identities = 14/73 (19%), Positives = 27/73 (36%), Gaps = 8/73 (10%)
Query: 8 EVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKG---FTK 64
+L +P G F++R+S + F++S R H I + +
Sbjct: 48 ALLEGKPEGTFLLRDSAQEDYLFSVSFRRYSRSL-----HARIEQWNHNFSFDAHDPCVF 102
Query: 65 EFSSLTSLITHHS 77
+T L+ H+
Sbjct: 103 HSPDITGLLEHYK 115
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK,
signal transduction, SH2, SH3, SRC homology, tyrosine
kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1
d.93.1.1 d.144.1.7 PDB: 1jeg_A
Length = 450
Score = 58.1 bits (141), Expect = 9e-12
Identities = 22/80 (27%), Positives = 33/80 (41%), Gaps = 6/80 (7%)
Query: 8 EVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFS 67
+L G F+VREST PG + L + + HY I+ A I F
Sbjct: 94 RLLYPPETGLFLVRESTNYPGDYTLCVS-----CEGKVEHYRIMYHASKLSI-DEEVYFE 147
Query: 68 SLTSLITHHSVMPELLPCTL 87
+L L+ H++ + L L
Sbjct: 148 NLMQLVEHYTTDADGLCTRL 167
>2iug_A Phosphatidylinositol 3-kinase regulatory alpha subunit;
transferase, polymorphism, UBL conjugation,
phosphorylation, SH2, PI3K, SH2 domain; 1.89A {Homo
sapiens} PDB: 2iuh_A* 2iui_A* 1fu5_A* 1fu6_A 1oo3_A
1oo4_A* 2pna_A 2pnb_A
Length = 120
Score = 55.0 bits (133), Expect = 2e-11
Identities = 20/71 (28%), Positives = 28/71 (39%), Gaps = 7/71 (9%)
Query: 8 EVLSQEPVGAFMVRESTTK-PGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEF 66
E L G F+VR+++TK G + L+LR I Y F
Sbjct: 25 EKLRDTADGTFLVRDASTKMHGDYTLTLRKGGNNK-----LIKIFHRDGKYGFSD-PLTF 78
Query: 67 SSLTSLITHHS 77
SS+ LI H+
Sbjct: 79 SSVVELINHYR 89
>2c9w_A Suppressor of cytokine signaling 2; growth regulation, SH2 domain,
signal transduction inhibitor nuclear protein; 1.9A
{Homo sapiens} SCOP: a.271.1.1 d.93.1.1
Length = 169
Score = 55.6 bits (134), Expect = 3e-11
Identities = 19/96 (19%), Positives = 35/96 (36%), Gaps = 12/96 (12%)
Query: 8 EVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKI------KG 61
E L + P G F++R+S+ +S++ G + I +++ K
Sbjct: 31 EKLKEAPEGTFLIRDSSHSDYLLTISVK-----TSAGPTNLRIEYQDGKFRLDSIICVKS 85
Query: 62 FTKEFSSLTSLITHHSVMPELLPCTLSLHRYNPNFE 97
K+F S+ LI ++ V T N
Sbjct: 86 KLKQFDSVVHLIDYY-VQMCKDKRTGPEAPRNGTVH 120
>3hhm_B NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5-
triphosphate, wortmannin, H1047R, ATP-binding, disease
mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB:
3hiz_B 2rd0_B 4a55_B* 3mtt_A
Length = 373
Score = 54.1 bits (129), Expect = 3e-10
Identities = 20/71 (28%), Positives = 28/71 (39%), Gaps = 7/71 (9%)
Query: 8 EVLSQEPVGAFMVRESTTK-PGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEF 66
E L G F+VR+++TK G + L+LR I Y F
Sbjct: 24 EKLRDTADGTFLVRDASTKMHGDYTLTLR-----KGGNNKLIKIFHRDGKYGFSD-PLTF 77
Query: 67 SSLTSLITHHS 77
SS+ LI H+
Sbjct: 78 SSVVELINHYR 88
Score = 51.4 bits (122), Expect = 3e-09
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 6/65 (9%)
Query: 8 EVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFS 67
+L + G F+VRES+ GC+A S+ V E + H +I +TA GY +S
Sbjct: 315 NLLRGKRDGTFLVRESSK-QGCYACSVVVDGE-----VKHCVINKTATGYGFAEPYNLYS 368
Query: 68 SLTSL 72
SL L
Sbjct: 369 SLKEL 373
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES,
fujinami, avian sarcoma, viral, feline virus, SGC; HET:
STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Length = 377
Score = 52.3 bits (126), Expect = 1e-09
Identities = 20/80 (25%), Positives = 31/80 (38%), Gaps = 10/80 (12%)
Query: 8 EVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFS 67
E+L G F+VRES + LS+ H++I Y+++G F
Sbjct: 27 ELLVHS--GDFLVRESQG-KQEYVLSVL-----WDGLPRHFIIQSLDNLYRLEGEG--FP 76
Query: 68 SLTSLITHHSVMPELLPCTL 87
S+ LI H + L
Sbjct: 77 SIPLLIDHLLSTQQPLTKKS 96
>1wqu_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; SH2 domain,
feline sarcoma oncogene, structural genomics; NMR {Homo
sapiens} PDB: 2dcr_A
Length = 114
Score = 49.3 bits (118), Expect = 2e-09
Identities = 21/87 (24%), Positives = 35/87 (40%), Gaps = 10/87 (11%)
Query: 8 EVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFS 67
E+L G F+VRES K + LS+ H++I Y+++G + F
Sbjct: 30 ELLVHS--GDFLVRESQGKQE-YVLSVL-----WDGLPRHFIIQSLDNLYRLEG--EGFP 79
Query: 68 SLTSLITHHSVMPELLPCTLSLHRYNP 94
S+ LI H + L + +
Sbjct: 80 SIPLLIDHLLSTQQPLTKKSGVVLHRA 106
>2hmh_A Suppressor of cytokine signaling 3; SOCS3, GP130, PTyr, peptide
complex, cytokine regulator; HET: PTR; 2.00A {Mus
musculus}
Length = 152
Score = 49.6 bits (118), Expect = 4e-09
Identities = 17/73 (23%), Positives = 32/73 (43%), Gaps = 5/73 (6%)
Query: 8 EVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIA---HYLILRTAKGYKIKGFTK 64
+LS EP G F++R+S+ + F LS++ +L I L++ +
Sbjct: 48 LLLSAEPAGTFLIRDSSDQRHFFTLSVKTQSGTKNLRIQXEGGSFSLQS--DPRSTQPVP 105
Query: 65 EFSSLTSLITHHS 77
F + L+ H+
Sbjct: 106 RFDXVLKLVHHYM 118
>2lqn_A CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT10 oncogene
homolog (avian)- signaling protein; NMR {Homo sapiens}
PDB: 2lqw_A*
Length = 303
Score = 50.8 bits (120), Expect = 5e-09
Identities = 19/89 (21%), Positives = 36/89 (40%), Gaps = 6/89 (6%)
Query: 8 EVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFS 67
L + G F+VR+S+T PG + LS+ + ++HY+I +EF
Sbjct: 26 TRLQGQRHGMFLVRDSSTCPGDYVLSVS-----ENSRVSHYIINSLPNRRFK-IGDQEFD 79
Query: 68 SLTSLITHHSVMPELLPCTLSLHRYNPNF 96
L +L+ + + + P+
Sbjct: 80 HLPALLEFYKIHYLDTTTLIEPAPRYPSP 108
>1gri_A Growth factor bound protein 2; SH2, SH3, signal transduction
adaptor; 3.10A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1
d.93.1.1 PDB: 1aze_A 2a37_A 2azv_A 2a36_A 2azs_A
Length = 217
Score = 50.1 bits (119), Expect = 6e-09
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 7/84 (8%)
Query: 8 EVLSQE-PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEF 66
E+LS++ GAF++RES + PG F+LS+ + H+ +LR G K F
Sbjct: 72 EMLSKQRHDGAFLIRESESAPGDFSLSV-----KFGNDVQHFKVLRDGAGKYFLWVVK-F 125
Query: 67 SSLTSLITHHSVMPELLPCTLSLH 90
+SL L+ +H + L
Sbjct: 126 NSLNELVDYHRSTSVSRNQQIFLR 149
>2eo6_A B-cell linker protein; SH2, cytoplasmic adapter protein, B-cell
adapter containing SH2 domain protein; NMR {Mus
musculus}
Length = 141
Score = 48.3 bits (115), Expect = 9e-09
Identities = 14/84 (16%), Positives = 32/84 (38%), Gaps = 8/84 (9%)
Query: 10 LSQEPVGAFMVRESTTKPG--CFALSLRVPKEFHHLGIAHYLILRTAKGYKI---KGFTK 64
G+F++R+S+ + L K +++ + K Y + K +
Sbjct: 40 HRSNKDGSFLIRKSSGHDSKQPYTLVAFFNKRVYNI---PVRFIEATKQYALGKKKNGEE 96
Query: 65 EFSSLTSLITHHSVMPELLPCTLS 88
F S+ ++ H P +L + +
Sbjct: 97 YFGSVVEIVNSHQHNPLVLIDSQN 120
>2dvj_A V-CRK sarcoma virus CT10 oncogene homolog, isoform A; SH3, SH2,
signal transduction, adapter molecule, signaling
protein; HET: PTR; NMR {Homo sapiens} PDB: 2eyy_A
2eyv_A 2eyw_A
Length = 230
Score = 46.0 bits (108), Expect = 2e-07
Identities = 14/61 (22%), Positives = 28/61 (45%), Gaps = 5/61 (8%)
Query: 8 EVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFS 67
+L + G F+VR+S+T PG + LS+ + ++HY+I + + +
Sbjct: 27 ALLQGQRHGVFLVRDSSTSPGDYVLSVS-----ENSRVSHYIINSSGPRPPVPPSPAQPP 81
Query: 68 S 68
Sbjct: 82 P 82
>2el8_A Signal-transducing adaptor protein 2; SH2 domain, phosphotyrosine
binding domain, protein tyrosine kinase, signal
transduction, structural genomics; NMR {Homo sapiens}
Length = 118
Score = 43.2 bits (101), Expect = 7e-07
Identities = 15/72 (20%), Positives = 32/72 (44%), Gaps = 7/72 (9%)
Query: 8 EVLSQEP-VGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKI---KGFT 63
+L + P G ++R S +++ R H+ + HY + R Y I + F+
Sbjct: 35 LLLERYPECGNLLLRPSGDGADGVSVTTRQMHNGTHV-VRHYKVKREGPKYVIDVEQPFS 93
Query: 64 KEFSSLTSLITH 75
+SL +++ +
Sbjct: 94 --CTSLDAVVNY 103
>2b3o_A Tyrosine-protein phosphatase, non-receptor type 6; protein
tyrosine phosphatase, SHP-1, signaling, hydrolase;
2.80A {Homo sapiens} PDB: 1x6c_A 2rmx_A* 2yu7_A*
Length = 532
Score = 43.7 bits (103), Expect = 2e-06
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 6/68 (8%)
Query: 16 GAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITH 75
G+F+ R S G F+LS+RV + + H I + Y + G K F++LT L+ +
Sbjct: 25 GSFLARPSRKNQGDFSLSVRVGDQ-----VTHIRIQNSGDFYDLYGGEK-FATLTELVEY 78
Query: 76 HSVMPELL 83
++ +L
Sbjct: 79 YTQQQGVL 86
Score = 27.5 bits (61), Expect = 0.59
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 16 GAFMVRESTTKPGCFALSLR 35
F+VRES ++PG F LS+
Sbjct: 131 WTFLVRESLSQPGDFVLSVL 150
>3ps5_A Tyrosine-protein phosphatase non-receptor type 6; SH2, PTP,
hydrolase, signaling protein; 3.10A {Homo sapiens}
Length = 595
Score = 43.0 bits (101), Expect = 3e-06
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 6/68 (8%)
Query: 16 GAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITH 75
G+F+ R S G F+LS+RV + + H I + Y + G K F++LT L+ +
Sbjct: 25 GSFLARPSRKNQGDFSLSVRVGDQ-----VTHIRIQNSGDFYDLYGGEK-FATLTELVEY 78
Query: 76 HSVMPELL 83
++ +L
Sbjct: 79 YTQQQGVL 86
Score = 27.2 bits (60), Expect = 0.79
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 16 GAFMVRESTTKPGCFALSLR 35
F+VRES ++PG F LS+
Sbjct: 131 WTFLVRESLSQPGDFVLSVL 150
>3qwy_A Cell death abnormality protein 2; cell engulfment, signaling
protein; 2.52A {Caenorhabditis elegans}
Length = 308
Score = 42.9 bits (100), Expect = 3e-06
Identities = 19/89 (21%), Positives = 39/89 (43%), Gaps = 9/89 (10%)
Query: 13 EPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGY------KIKGFTKEF 66
+G F++R+S+ PG ++L++R E + + HYLI R +K + F
Sbjct: 62 VSIGTFLMRDSSR-PGEYSLTVREADEGNA--VCHYLIERGEPKEDGTAAAGVKIANQSF 118
Query: 67 SSLTSLITHHSVMPELLPCTLSLHRYNPN 95
+ +L+ H + L+ ++
Sbjct: 119 PDIPALLNHFKMRVLTEASLLAAYKKPII 147
>2shp_A SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin signaling, SH2
protein; HET: CAT; 2.00A {Homo sapiens} SCOP: c.45.1.2
d.93.1.1 d.93.1.1
Length = 525
Score = 41.8 bits (98), Expect = 7e-06
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 6/74 (8%)
Query: 10 LSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSL 69
L++ G+F+ R S + PG LS+R + H I T Y + G K F++L
Sbjct: 21 LTRGVDGSFLARPSKSNPGDLTLSVRRNGA-----VTHIKIQNTGDYYDLYGGEK-FATL 74
Query: 70 TSLITHHSVMPELL 83
L+ ++ L
Sbjct: 75 AELVQYYMEHHGQL 88
Score = 36.0 bits (83), Expect = 8e-04
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 6/70 (8%)
Query: 16 GAFMVRESTTKPGCFALSLR-----VPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLT 70
G+F+VRES + PG F LS+R + H +I Y + G + F SLT
Sbjct: 133 GSFLVRESQSHPGDFVLSVRTGDDKGESNDGKSKVTHVMIRCQELKYDV-GGGERFDSLT 191
Query: 71 SLITHHSVMP 80
L+ H+ P
Sbjct: 192 DLVEHYKKNP 201
>2eyz_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH2, SH3,
signaling protein; NMR {Homo sapiens} PDB: 2l3s_A 2l3p_A
2l3q_A 2ggr_A
Length = 304
Score = 41.1 bits (95), Expect = 1e-05
Identities = 19/101 (18%), Positives = 34/101 (33%), Gaps = 11/101 (10%)
Query: 8 EVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAH--------YLILRTAKGYKI 59
+L + G F+VR+S+T PG + LS+ H I + G
Sbjct: 25 ALLQGQRHGVFLVRDSSTSPGDYVLSVSENSRVSHYIINSSGPRPPVPPSPAQPPPGVSP 84
Query: 60 KGFT---KEFSSLTSLITHHSVMPELLPCTLSLHRYNPNFE 97
+EF SL +L+ + + + +
Sbjct: 85 SRLRIGDQEFDSLPALLEFYKIHYLDTTTLIEPVSRSRQGS 125
>3qwx_X Cell death abnormality protein 2; cell engulfment, signaling
protein; 2.01A {Caenorhabditis elegans}
Length = 174
Score = 36.7 bits (84), Expect = 3e-04
Identities = 17/90 (18%), Positives = 36/90 (40%), Gaps = 9/90 (10%)
Query: 13 EPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGF------TKEF 66
+G F++R+S+ PG ++L++R + + HYLI R + F
Sbjct: 33 VSIGTFLMRDSSR-PGEYSLTVR--EADEGNAVCHYLIERGEPKEDGTAAAGVKIANQSF 89
Query: 67 SSLTSLITHHSVMPELLPCTLSLHRYNPNF 96
+ +L+ H + L+ ++
Sbjct: 90 PDIPALLNHFKMRVLTEASLLAAYKKPIIE 119
>1uur_A Stata protein, STAT protein; transcription activator, SH2, signal
transduction, transducer, transcription factor; HET:
PTR; 2.7A {Dictyostelium discoideum} SCOP: a.47.1.1
b.2.5.5 d.93.1.1 PDB: 1uus_A*
Length = 473
Score = 36.9 bits (84), Expect = 4e-04
Identities = 19/86 (22%), Positives = 31/86 (36%), Gaps = 4/86 (4%)
Query: 8 EVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFS 67
+ L + G F++R S PG F ++ + I HYL+ K F S
Sbjct: 365 DALQNQDPGTFIIRFSERNPGQFGIAYIGVEM--PARIKHYLVQPNDTAAAKKTFPDFLS 422
Query: 68 SLTSL--ITHHSVMPELLPCTLSLHR 91
+ + + P L LH+
Sbjct: 423 EHSQFVNLLQWTKDTNGAPRFLKLHK 448
>2cr4_A 3BP-2, SH3 domain-binding protein 2; structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 126
Score = 34.3 bits (78), Expect = 0.001
Identities = 13/62 (20%), Positives = 26/62 (41%), Gaps = 5/62 (8%)
Query: 16 GAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITH 75
G + +R S+TK G + + +Y I + ++G F S+ S++ H
Sbjct: 45 GLYCIRNSSTKSGKVLVVWDETSN----KVRNYRIFEKDSKFYLEG-EVLFVSVGSMVEH 99
Query: 76 HS 77
+
Sbjct: 100 YH 101
>3or8_A Transcription elongation factor SPT6; SH2, CTD binding; HET: MES;
1.60A {Candida glabrata} PDB: 3pjp_A* 3psj_A* 3psk_A
2l3t_A 3gxw_A 3gxx_A
Length = 197
Score = 33.7 bits (77), Expect = 0.004
Identities = 15/74 (20%), Positives = 33/74 (44%), Gaps = 6/74 (8%)
Query: 7 LEVLSQEPVGAFMVRESTTKPGCFALSLRVPKE-FHHLGI---AHYLILRTAKGYKIKGF 62
+ L + G F++R+S+ A++ ++ K+ F H+ I L K ++G
Sbjct: 20 EDYLRSKERGDFVIRQSSRGDDHLAITWKLDKDLFQHVDIQELEKENPLALGKVLVVEG- 78
Query: 63 TKEFSSLTSLITHH 76
+ + L +I +
Sbjct: 79 -QRYHDLDQIIVEY 91
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC,
gtpas activation, metal-binding, phorbol-ester binding,
SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Length = 463
Score = 32.9 bits (75), Expect = 0.009
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 1 MIQEITLEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHL 43
MI + L G++++RES +PG + L+LR + +
Sbjct: 57 MISREAADQLLIVAEGSYLIRESQRQPGTYTLALRFGSQTRNF 99
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 28.5 bits (63), Expect = 0.35
Identities = 15/79 (18%), Positives = 24/79 (30%), Gaps = 15/79 (18%)
Query: 6 TLEVLSQEPVGAFMV-----------RESTTKPGCFALSLRVPKEFHHLGI---AHYLIL 51
TL L + + A V + P L L +P +G+ AHY++
Sbjct: 194 TLSELIRTTLDAEKVFTQGLNILEWLENPSNTPDKDYL-LSIPISCPLIGVIQLAHYVVT 252
Query: 52 RTAKGYKIKGFTKEFSSLT 70
G+ T
Sbjct: 253 AKLLGFTPGELRSYLKGAT 271
>3s3e_A Tyrosine-protein phosphatase 10D; differentiation, neurogenesis,
signal transduction, developm protein, hydrolase; 2.40A
{Drosophila melanogaster} PDB: 3s3f_A 3s3h_A* 3s3k_A*
Length = 307
Score = 25.7 bits (57), Expect = 2.2
Identities = 10/48 (20%), Positives = 18/48 (37%), Gaps = 3/48 (6%)
Query: 45 IAHYLILRTAKGYKIKGFTKEFSSLTSLITHHSVMPELLPCTLSLHRY 92
HY ++ + F++EF L + LPC +R+
Sbjct: 32 AEHYRLMSADSDF---RFSEEFEELKHVGRDQPCTFADLPCNRPKNRF 76
>1bf5_A Signal transducer and activator of transcription 1-alpha/beta;
complex (SH2 domain/DNA), SH2 domain, transcription
factor; HET: DNA PTR; 2.90A {Homo sapiens} SCOP:
a.47.1.1 b.2.5.5 d.93.1.1
Length = 575
Score = 25.2 bits (54), Expect = 4.4
Identities = 11/76 (14%), Positives = 23/76 (30%), Gaps = 1/76 (1%)
Query: 8 EVLSQEPVGAFMVRESTT-KPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEF 66
+L + G F++R S + + G + + H + T K F
Sbjct: 454 ALLKDQQPGTFLLRFSESSREGAITFTWVERSQNGGEPDFHAVEPYTKKELSAVTFPDII 513
Query: 67 SSLTSLITHHSVMPEL 82
+ + + L
Sbjct: 514 RNYKVMAAENIPENPL 529
>3u3l_C Tablysin 15; CAP domain, alphavbeta3 integrin, salivary gland,
protein BI; HET: PLM CIT; 1.57A {Tabanus yao} PDB:
3u3n_C* 3u3u_C*
Length = 233
Score = 24.7 bits (53), Expect = 5.8
Identities = 5/32 (15%), Positives = 11/32 (34%)
Query: 17 AFMVRESTTKPGCFALSLRVPKEFHHLGIAHY 48
A + + T GC + + L ++
Sbjct: 158 ALAISDRVTAVGCGLTTWEDGAKARALLTCNF 189
>1yvl_A Signal transducer and activator of transcription 1-alpha/beta;
signaling protein; HET: PTR; 3.00A {Homo sapiens}
Length = 683
Score = 24.5 bits (52), Expect = 7.1
Identities = 11/77 (14%), Positives = 23/77 (29%), Gaps = 1/77 (1%)
Query: 8 EVLSQEPVGAFMVRESTT-KPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEF 66
+L + G F++R S + + G + + H + T K F
Sbjct: 589 ALLKDQQPGTFLLRFSESSREGAITFTWVERSQNGGEPDFHAVEPYTKKELSAVTFPDII 648
Query: 67 SSLTSLITHHSVMPELL 83
+ + + L
Sbjct: 649 RNYKVMAAENIPENPLK 665
>2v3z_A XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proline- specific
enzyme, aminopeptidas manganese enzyme, protease,
manganese; HET: CSO; 1.56A {Escherichia coli} SCOP:
c.55.2.1 d.127.1.1 PDB: 2bwy_A* 1wl9_A 1m35_A 1n51_A*
1w2m_A 1a16_A 1wbq_A 1wl6_A* 1w7v_A 1wlr_A* 2bh3_A*
2bha_A* 2bhb_A* 2bhc_A* 2bhd_A* 2bn7_A* 1jaw_A 2bwt_A*
2bwu_A* 2bww_A* ...
Length = 440
Score = 24.1 bits (53), Expect = 9.5
Identities = 7/20 (35%), Positives = 11/20 (55%), Gaps = 1/20 (5%)
Query: 27 PGC-FALSLRVPKEFHHLGI 45
PG A VP+++ +GI
Sbjct: 384 PGLYIAPDAEVPEQYRGIGI 403
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.323 0.137 0.409
Gapped
Lambda K H
0.267 0.0533 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 1,452,070
Number of extensions: 71892
Number of successful extensions: 331
Number of sequences better than 10.0: 1
Number of HSP's gapped: 235
Number of HSP's successfully gapped: 92
Length of query: 97
Length of database: 6,701,793
Length adjustment: 63
Effective length of query: 34
Effective length of database: 4,942,770
Effective search space: 168054180
Effective search space used: 168054180
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 51 (23.9 bits)