RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy3300
(97 letters)
>d1o48a_ d.93.1.1 (A:) c-src tyrosine kinase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 106
Score = 64.7 bits (157), Expect = 9e-16
Identities = 23/77 (29%), Positives = 36/77 (46%)
Query: 11 SQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLT 70
++ P G F+VRES T G + LS+ L + HY I + G +F+SL
Sbjct: 24 AENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFNSLQ 83
Query: 71 SLITHHSVMPELLPCTL 87
L+ ++S + L L
Sbjct: 84 QLVAYYSKHADGLCHRL 100
>d1lkka_ d.93.1.1 (A:) p56-lck tyrosine kinase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 105
Score = 64.3 bits (156), Expect = 1e-15
Identities = 20/74 (27%), Positives = 32/74 (43%)
Query: 14 PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLI 73
G+F++RES + G F+LS+R + + HY I G F L L+
Sbjct: 26 THGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNLDNGGFYISPRITFPGLHELV 85
Query: 74 THHSVMPELLPCTL 87
H++ + L L
Sbjct: 86 RHYTNASDGLCTRL 99
>d1g83a2 d.93.1.1 (A:142-245) Tyrosine kinase Fyn {Human (Homo
sapiens) [TaxId: 9606]}
Length = 104
Score = 63.6 bits (154), Expect = 2e-15
Identities = 22/74 (29%), Positives = 34/74 (45%)
Query: 14 PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLI 73
P G F++RES T G ++LS+R + + HY I + G +F +L L+
Sbjct: 28 PRGTFLIRESETTKGAYSLSIRDWDDMKGDHVKHYKIRKLDNGGYYITTRAQFETLQQLV 87
Query: 74 THHSVMPELLPCTL 87
H+S L L
Sbjct: 88 QHYSERAAGLSSRL 101
>d1qcfa2 d.93.1.1 (A:146-248) Hemopoetic cell kinase Hck {Human
(Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 63.2 bits (153), Expect = 3e-15
Identities = 21/74 (28%), Positives = 33/74 (44%)
Query: 14 PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLI 73
+G+FM+R+S T G ++LS+R + HY I G FS+L L+
Sbjct: 23 MLGSFMIRDSETTKGSYSLSVRDYDPRQGDTVKHYKIRTLDNGGFYISPRSTFSTLQELV 82
Query: 74 THHSVMPELLPCTL 87
H+ + L L
Sbjct: 83 DHYKKGNDGLCQKL 96
>d1uura3 d.93.1.1 (A:577-707) STAT homologue {Dictyostelium
discoideum [TaxId: 44689]}
Length = 131
Score = 61.5 bits (149), Expect = 3e-14
Identities = 19/86 (22%), Positives = 31/86 (36%), Gaps = 4/86 (4%)
Query: 8 EVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFS 67
+ L + G F++R S PG F ++ + I HYL+ K F S
Sbjct: 23 DALQNQDPGTFIIRFSERNPGQFGIAYIGVEMPAR--IKHYLVQPNDTAAAKKTFPDFLS 80
Query: 68 SLTSL--ITHHSVMPELLPCTLSLHR 91
+ + + P L LH+
Sbjct: 81 EHSQFVNLLQWTKDTNGAPRFLKLHK 106
>d1nrva_ d.93.1.1 (A:) Growth factor receptor-bound protein 10,
GRB10 {Human (Homo sapiens) [TaxId: 9606]}
Length = 105
Score = 59.6 bits (144), Expect = 6e-14
Identities = 18/78 (23%), Positives = 34/78 (43%), Gaps = 9/78 (11%)
Query: 14 PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG----YKIKGFTKEFSSL 69
G F++R+S + P F L+L ++ ++ IL + + +FS L
Sbjct: 27 VDGLFLLRDSQSNPKAFVLTLCHHQKIK-----NFQILPCEDDGQTFFSLDDGNTKFSDL 81
Query: 70 TSLITHHSVMPELLPCTL 87
L+ + + +LPC L
Sbjct: 82 IQLVDFYQLNKGVLPCKL 99
>d1opka2 d.93.1.1 (A:140-240) Abl tyrosine kinase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 101
Score = 58.9 bits (142), Expect = 1e-13
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
Query: 8 EVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFS 67
+LS G+F+VRES + PG ++SL + + HY I + G F+
Sbjct: 19 YLLSSGINGSFLVRESESSPGQRSISL-----RYEGRVYHYRINTASDGKLYVSSESRFN 73
Query: 68 SLTSLITHHSVMPELLPCTL 87
+L L+ HHS + + L TL
Sbjct: 74 TLAELVHHHSTVADGLITTL 93
>d2oq1a1 d.93.1.1 (A:5-134) Tyrosine-protein kinase zap-70 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 130
Score = 58.9 bits (142), Expect = 3e-13
Identities = 20/74 (27%), Positives = 28/74 (37%), Gaps = 5/74 (6%)
Query: 14 PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLI 73
G F++R+ G + LSL H + H+ I R G K L
Sbjct: 28 ADGLFLLRQCLRSLGGYVLSLV-----HDVRFHHFPIERQLNGTYAIAGGKAHCGPAELC 82
Query: 74 THHSVMPELLPCTL 87
+S P+ LPC L
Sbjct: 83 EFYSRDPDGLPCNL 96
>d2qmsa1 d.93.1.1 (A:420-532) Growth factor receptor-bound protein 7
{Human (Homo sapiens) [TaxId: 9606]}
Length = 113
Score = 58.0 bits (140), Expect = 4e-13
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 9/78 (11%)
Query: 14 PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG----YKIKGFTKEFSSL 69
G F+VRES P F LSL ++ H YLIL + + + + F+ L
Sbjct: 32 VDGLFLVRESQRNPQGFVLSLCHLQKVKH-----YLILPSEEEGRLYFSMDDGQTRFTDL 86
Query: 70 TSLITHHSVMPELLPCTL 87
L+ H + +LPC L
Sbjct: 87 LQLVEFHQLNRGILPCLL 104
>d1blja_ d.93.1.1 (A:) P55 Blk protein tyrosine kinase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 114
Score = 57.8 bits (139), Expect = 5e-13
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Query: 14 PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLI 73
G+F++RES + G F+LS++ + + HY I G F +L +L+
Sbjct: 34 KAGSFLIRESESNKGAFSLSVKDITTQGEV-VKHYKIRSLDNGGYYISPRITFPTLQALV 92
Query: 74 THHSVMPELLPCTL 87
H+S + L L
Sbjct: 93 QHYSKKGDGLCQKL 106
>d1r1qa_ d.93.1.1 (A:) GRB2-related adaptor protein 2 (MONA, GRID)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 97
Score = 56.8 bits (137), Expect = 9e-13
Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 6/73 (8%)
Query: 8 EVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFS 67
+L + +G F++R S + PG F++S+R H + H+ ++R KG T++F
Sbjct: 20 NLLMGKDIGFFIIRASQSSPGDFSISVR-----HEDDVQHFKVMRDTKGNYFLW-TEKFP 73
Query: 68 SLTSLITHHSVMP 80
SL L+ ++
Sbjct: 74 SLNKLVDYYRTTS 86
>d1rjaa_ d.93.1.1 (A:) Tyrosine-protein kinase 6 (Breast tumor
kinase, Brk) {Human (Homo sapiens) [TaxId: 9606]}
Length = 100
Score = 56.6 bits (136), Expect = 9e-13
Identities = 19/75 (25%), Positives = 27/75 (36%), Gaps = 5/75 (6%)
Query: 14 PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLI 73
GAF++R S + LS+ + HY I R A G F SL L+
Sbjct: 24 ATGAFLIRVSEKPSADYVLSV-----RDTQAVRHYKIWRRAGGRLHLNEAVSFLSLPELV 78
Query: 74 THHSVMPELLPCTLS 88
+H L+
Sbjct: 79 NYHRAQSLSHGLRLA 93
>d1k9aa2 d.93.1.1 (A:77-177) Carboxyl-terminal src kinase (csk)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 101
Score = 55.4 bits (133), Expect = 3e-12
Identities = 22/80 (27%), Positives = 33/80 (41%), Gaps = 6/80 (7%)
Query: 8 EVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFS 67
+L G F+VREST PG + L + + HY I+ A I F
Sbjct: 18 RLLYPPETGLFLVRESTNYPGDYTLCV-----SCEGKVEHYRIMYHASKLSIDE-EVYFE 71
Query: 68 SLTSLITHHSVMPELLPCTL 87
+L L+ H++ + L L
Sbjct: 72 NLMQLVEHYTTDADGLCTRL 91
>d1a81a1 d.93.1.1 (A:9-137) Syk tyrosine kinase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 129
Score = 55.8 bits (134), Expect = 4e-12
Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 5/75 (6%)
Query: 14 PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLI 73
G +++R+S G FALS+ ++ HH Y I R G + +S L
Sbjct: 27 SDGLYLLRQSRNYLGGFALSVAHGRKAHH-----YTIERELNGTYAIAGGRTHASPADLC 81
Query: 74 THHSVMPELLPCTLS 88
+HS + L C L
Sbjct: 82 HYHSQESDGLVCLLK 96
>d1jwoa_ d.93.1.1 (A:) Csk homologous kinase Chk {Human (Homo
sapiens) [TaxId: 9606]}
Length = 97
Score = 53.9 bits (129), Expect = 1e-11
Identities = 19/80 (23%), Positives = 30/80 (37%), Gaps = 6/80 (7%)
Query: 8 EVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFS 67
+ L G F+VRES PG + L + + HY +L I F
Sbjct: 18 QQLQPPEDGLFLVRESARHPGDYVLCV-----SFGRDVIHYRVLHRDGHLTIDE-AVFFC 71
Query: 68 SLTSLITHHSVMPELLPCTL 87
+L ++ H+S + L
Sbjct: 72 NLMDMVEHYSKDKGAICTKL 91
>d1jyra_ d.93.1.1 (A:) Growth factor receptor-bound protein 2
(GRB2) {Human (Homo sapiens) [TaxId: 9606]}
Length = 96
Score = 53.4 bits (128), Expect = 2e-11
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Query: 8 EVLSQEPV-GAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEF 66
E+LS++ GAF++RES + PG F+LS++ + H+ +LR G +F
Sbjct: 17 EMLSKQRHDGAFLIRESESAPGDFSLSVK-----FGNDVQHFKVLRDGAGKYFLW-VVKF 70
Query: 67 SSLTSLITHHSVMPELLPCTLSL 89
+SL L+ +H + L
Sbjct: 71 NSLNELVDYHRSTSVSRNQQIFL 93
>d2oq1a2 d.93.1.1 (A:135-258) Tyrosine-protein kinase zap-70 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 124
Score = 52.7 bits (126), Expect = 6e-11
Identities = 18/74 (24%), Positives = 30/74 (40%), Gaps = 6/74 (8%)
Query: 14 PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLI 73
G F++R G +ALSL + + HYLI + G +F +L L+
Sbjct: 51 TDGKFLLRPRKE-QGTYALSL-----IYGKTVYHYLISQDKAGKYCIPEGTKFDTLWQLV 104
Query: 74 THHSVMPELLPCTL 87
+ + + L L
Sbjct: 105 EYLKLKADGLIYCL 118
>d2shpa3 d.93.1.1 (A:111-218) Tyrosine phoshatase shp-2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 108
Score = 52.0 bits (124), Expect = 6e-11
Identities = 25/90 (27%), Positives = 37/90 (41%), Gaps = 6/90 (6%)
Query: 10 LSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIA-----HYLILRTAKGYKIKGFTK 64
+ G+F+VRES + PG F LS+R + H +I Y + G +
Sbjct: 17 TEKGKHGSFLVRESQSHPGDFVLSVRTGDDKGESNDGKSKVTHVMIRCQELKYDVGG-GE 75
Query: 65 EFSSLTSLITHHSVMPELLPCTLSLHRYNP 94
F SLT L+ H+ P + L P
Sbjct: 76 RFDSLTDLVEHYKKNPMVETLGTVLQLKQP 105
>d1i3za_ d.93.1.1 (A:) Ews/fli1 activated transcript 2, Eat2
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 103
Score = 51.6 bits (123), Expect = 8e-11
Identities = 19/85 (22%), Positives = 31/85 (36%), Gaps = 10/85 (11%)
Query: 9 VLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGY-----KIKGFT 63
+L G F++R+S + PG L + + Y I R GY
Sbjct: 19 LLKGGVDGNFLIRDSESVPGALCLCVS-----FKKLVYSYRIFREKHGYYRIETDAHTPR 73
Query: 64 KEFSSLTSLITHHSVMPELLPCTLS 88
F +L L++ + + L LS
Sbjct: 74 TIFPNLQELVSKYGKPGQGLVVHLS 98
>d2shpa2 d.93.1.1 (A:2-110) Tyrosine phoshatase shp-2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 109
Score = 51.9 bits (124), Expect = 1e-10
Identities = 20/84 (23%), Positives = 33/84 (39%), Gaps = 7/84 (8%)
Query: 8 EVLSQEPV-GAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEF 66
+L V G+F+ R S + PG LS+ + + H I T Y + G K F
Sbjct: 17 NLLLTRGVDGSFLARPSKSNPGDLTLSV-----RRNGAVTHIKIQNTGDYYDLYGGEK-F 70
Query: 67 SSLTSLITHHSVMPELLPCTLSLH 90
++L L+ ++ L
Sbjct: 71 ATLAELVQYYMEHHGQLKEKNGDV 94
>d2c9wa2 d.93.1.1 (A:32-134) Suppressor of cytokine signaling 2,
SOCS-2 {Human (Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 51.6 bits (123), Expect = 1e-10
Identities = 17/71 (23%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Query: 8 EVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLI-LRTAKGYKIKGFTKEF 66
E L + P G F++R+S+ +S++ +L I + R +K K+F
Sbjct: 29 EKLKEAPEGTFLIRDSSHSDYLLTISVKTSAGPTNLRIEYQDGKFRLDSIICVKSKLKQF 88
Query: 67 SSLTSLITHHS 77
S+ LI ++
Sbjct: 89 DSVVHLIDYYV 99
>d1qada_ d.93.1.1 (A:) Phosphatidylinositol 3-kinase, p85-alpha
subunit {Cow (Bos taurus) [TaxId: 9913]}
Length = 107
Score = 51.6 bits (123), Expect = 1e-10
Identities = 28/85 (32%), Positives = 40/85 (47%), Gaps = 11/85 (12%)
Query: 8 EVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFS 67
+L + G F+VRES+ K GC+A S+ V E H +I +TA GY +S
Sbjct: 23 NLLRGKRDGTFLVRESS-KQGCYACSVVVDGEVKH-----CVINKTATGYGFAEPYNLYS 76
Query: 68 SLTSLITHHSVMP-----ELLPCTL 87
SL L+ H+ + L TL
Sbjct: 77 SLKELVLHYQHTSLVQHNDSLNVTL 101
>d1rpya_ d.93.1.1 (A:) Adaptor protein Aps {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 86
Score = 50.3 bits (120), Expect = 2e-10
Identities = 13/73 (17%), Positives = 23/73 (31%), Gaps = 6/73 (8%)
Query: 4 EITLEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFT 63
+ G F++R+S T+PG L+ H + G
Sbjct: 18 AQLVLAGGPRSHGLFVIRQSETRPGECVLTFN-----FQGKAKHLRLSLNGHGQCHVQ-H 71
Query: 64 KEFSSLTSLITHH 76
F S+ ++ H
Sbjct: 72 LWFQSVFDMLRHF 84
>d1d4ta_ d.93.1.1 (A:) The Xlp protein Sap {Human (Homo sapiens)
[TaxId: 9606]}
Length = 104
Score = 49.3 bits (117), Expect = 7e-10
Identities = 16/86 (18%), Positives = 35/86 (40%), Gaps = 11/86 (12%)
Query: 8 EVLSQEPV-GAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGY-----KIKG 61
++L + G++++R+S + PG + L +H I Y + +T G
Sbjct: 18 KLLLATGLDGSYLLRDSESVPGVYCLC-----VLYHGYIYTYRVSQTETGSWSAETAPGV 72
Query: 62 FTKEFSSLTSLITHHSVMPELLPCTL 87
+ F + +LI+ + + L
Sbjct: 73 HKRYFRKIKNLISAFQKPDQGIVIPL 98
>d1luia_ d.93.1.1 (A:) Itk/tsk protein tyrosine kinase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 108
Score = 49.3 bits (117), Expect = 9e-10
Identities = 24/82 (29%), Positives = 33/82 (40%), Gaps = 4/82 (4%)
Query: 9 VLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIA-HYLILRTAKGYKIKGFTKE-- 65
+L GAFMVR+S T PG + +S+ HY I T K ++
Sbjct: 22 LLDTGKEGAFMVRDSRT-PGTYTVSVFTKAIISENPCIKHYHIKETNDSPKRYYVAEKYV 80
Query: 66 FSSLTSLITHHSVMPELLPCTL 87
F S+ LI +H L L
Sbjct: 81 FDSIPLLIQYHQYNGGGLVTRL 102
>d1mila_ d.93.1.1 (A:) Shc adaptor protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 104
Score = 48.4 bits (115), Expect = 2e-09
Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 7/73 (9%)
Query: 16 GAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLITH 75
G F+VRESTT PG + L+ H L++ + K F S++ LI++
Sbjct: 27 GDFLVRESTTTPGQYVLTGL-----QSGQPKHLLLVDPEGVVRTKD--HRFESVSHLISY 79
Query: 76 HSVMPELLPCTLS 88
H + S
Sbjct: 80 HMDNHLPIISAGS 92
>d1fu6a_ d.93.1.1 (A:) Phosphatidylinositol 3-kinase, p85-alpha
subunit {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 111
Score = 48.1 bits (114), Expect = 2e-09
Identities = 21/86 (24%), Positives = 30/86 (34%), Gaps = 12/86 (13%)
Query: 8 EVLSQEPVGAFMVRESTTK-PGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEF 66
E L G F+VR+++TK G + L+LR I Y F
Sbjct: 25 EKLRDTADGTFLVRDASTKMHGDYTLTLR-----KGGNNKSIKIFHRDGKYGFSD-PLTF 78
Query: 67 SSLTSLITHHSVMP-----ELLPCTL 87
+S+ LI H+ L L
Sbjct: 79 NSVVELINHYRNESLAQYNPKLDVKL 104
>d2eyva1 d.93.1.1 (A:12-120) Crk proto-oncogen {Human (Homo sapiens)
[TaxId: 9606]}
Length = 109
Score = 47.9 bits (113), Expect = 3e-09
Identities = 20/99 (20%), Positives = 35/99 (35%), Gaps = 26/99 (26%)
Query: 8 EVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGF----- 62
+L + G F+VR+S+T PG + LS+ HY+I + +
Sbjct: 14 ALLQGQRHGVFLVRDSSTSPGDYVLSVSENSRVS-----HYIINSSGPRPPVPPSPAQPP 68
Query: 63 -----------TKEFSSLTSLITHH-----SVMPELLPC 85
+EF SL +L+ + + P
Sbjct: 69 PGVSPSRLRIGDQEFDSLPALLEFYKIHYLDTTTLIEPV 107
>d1a81a2 d.93.1.1 (A:138-262) Syk tyrosine kinase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 125
Score = 47.4 bits (112), Expect = 5e-09
Identities = 20/74 (27%), Positives = 30/74 (40%), Gaps = 6/74 (8%)
Query: 14 PVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFSSLTSLI 73
G F++R G +AL L H + HY I + G K+F +L L+
Sbjct: 51 TNGKFLIRARD-NNGSYALCL-----LHEGKVLHYRIDKDKTGKLSIPEGKKFDTLWQLV 104
Query: 74 THHSVMPELLPCTL 87
H+S + L L
Sbjct: 105 EHYSYKADGLLRVL 118
>d1xa6a2 d.93.1.1 (A:21-161) Beta-chimaerin, N-terminal domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 141
Score = 46.1 bits (109), Expect = 2e-08
Identities = 19/79 (24%), Positives = 34/79 (43%), Gaps = 8/79 (10%)
Query: 8 EVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEFS 67
+ L GA+++RES +PGC+ L+LR + +Y + K + K F
Sbjct: 48 DELLGGVEGAYILRESQRQPGCYTLALRFGNQTL-----NYRLFHDGKHF---VGEKRFE 99
Query: 68 SLTSLITHHSVMPELLPCT 86
S+ L+T + +
Sbjct: 100 SIHDLVTDGLITLYIETKA 118
>d2cs0a1 d.93.1.1 (A:8-113) Hematopoietic SH2 domain containing
protein HSH2D {Human (Homo sapiens) [TaxId: 9606]}
Length = 106
Score = 45.1 bits (106), Expect = 3e-08
Identities = 21/82 (25%), Positives = 36/82 (43%), Gaps = 8/82 (9%)
Query: 8 EVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKG-YKIKGFTKEF 66
+L +P+G+F++R S + G + LS H+++ G + I G
Sbjct: 23 NLLESQPLGSFLIRVSHSHVG-YTLSY-----KAQSSCCHFMVKLLDDGTFMIPGEKVAH 76
Query: 67 SSLTSLITHHSVMP-ELLPCTL 87
+SL +L+T H P E L
Sbjct: 77 TSLDALVTFHQQKPIEPRRELL 98
>d2izva2 d.93.1.1 (A:274-385) Suppressor of cytokine signaling 4,
SOCS-4 {Human (Homo sapiens) [TaxId: 9606]}
Length = 112
Score = 45.0 bits (106), Expect = 4e-08
Identities = 13/73 (17%), Positives = 27/73 (36%), Gaps = 8/73 (10%)
Query: 8 EVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKE-- 65
+L +P G F++R+S + F++S + H I + +
Sbjct: 25 ALLEGKPEGTFLLRDSAQEDYLFSVSF-----RRYSRSLHARIEQWNHNFSFDAHDPCVF 79
Query: 66 -FSSLTSLITHHS 77
+T L+ H+
Sbjct: 80 HSPDITGLLEHYK 92
>d1bg1a3 d.93.1.1 (A:576-716) STAT3b {Mouse (Mus musculus) [TaxId:
10090]}
Length = 141
Score = 44.9 bits (106), Expect = 6e-08
Identities = 14/78 (17%), Positives = 26/78 (33%), Gaps = 9/78 (11%)
Query: 8 EVLSQEPVGAFMVRES-TTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEF 66
+LS +P G F++R S ++K G + I + Y +
Sbjct: 21 AILSTKPPGTFLLRFSESSKEGGVTFTWVEKDISGSTQIQSV------EPYTKQQLN--N 72
Query: 67 SSLTSLITHHSVMPELLP 84
S +I + +M
Sbjct: 73 MSFAEIIMGYKIMDATNI 90
>d2fcia1 d.93.1.1 (A:1-105) Phospholipase C-gamma-1 {Cow (Bos
taurus) [TaxId: 9913]}
Length = 105
Score = 43.1 bits (101), Expect = 2e-07
Identities = 20/90 (22%), Positives = 36/90 (40%), Gaps = 11/90 (12%)
Query: 8 EVLSQEPV-GAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILRTAKGYKIKGFTKEF 66
+L + P GAF+VR+ +A+S R + H + + + + EF
Sbjct: 23 HMLMRVPRDGAFLVRKRNEPN-SYAISFRAEGKIKH-----CRVQQEGQTVMLGN--SEF 74
Query: 67 SSLTSLITHHSVMPELLPCTLS--LHRYNP 94
SL LI+++ P L ++ N
Sbjct: 75 DSLVDLISYYEKHPLYRKMKLRYPINEENS 104
>d1yfoa_ c.45.1.2 (A:) Tyrosine phosphatase {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 288
Score = 23.2 bits (49), Expect = 6.4
Identities = 6/47 (12%), Positives = 12/47 (25%), Gaps = 3/47 (6%)
Query: 46 AHYLILRTAKGYKIKGFTKEFSSLTSLITHHSVMPELLPCTLSLHRY 92
F +EF++L + + +RY
Sbjct: 12 EEINRRMADDNK---LFREEFNALPACPIQATCEAASKEENKEKNRY 55
>d1ryqa_ g.41.9.3 (A:) putative DNA-directed RNA polymerase
subunit E'' (RpoE2) {Pyrococcus furiosus [TaxId: 2261]}
Length = 67
Score = 22.0 bits (47), Expect = 9.2
Identities = 4/11 (36%), Positives = 7/11 (63%)
Query: 25 TKPGCFALSLR 35
PG +A+ +R
Sbjct: 57 KVPGKYAIRVR 67
>d1juha_ b.82.1.5 (A:) Quercetin 2,3-dioxygenase {Aspergillus
japonicus [TaxId: 34381]}
Length = 348
Score = 22.9 bits (48), Expect = 9.3
Identities = 7/50 (14%), Positives = 13/50 (26%), Gaps = 3/50 (6%)
Query: 3 QEITLEVLSQEPVGAFMVRESTTKPGCFALSLRVPKEFHHLGIAHYLILR 52
Q V AF + + +L V H ++ +
Sbjct: 31 QLYRFYVTGPSSGYAFTLMGTNAPHSD---ALGVLPHIHQKHYENFYCNK 77
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.323 0.137 0.409
Gapped
Lambda K H
0.267 0.0515 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 347,046
Number of extensions: 13344
Number of successful extensions: 87
Number of sequences better than 10.0: 1
Number of HSP's gapped: 58
Number of HSP's successfully gapped: 37
Length of query: 97
Length of database: 2,407,596
Length adjustment: 59
Effective length of query: 38
Effective length of database: 1,597,526
Effective search space: 60705988
Effective search space used: 60705988
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 47 (22.4 bits)