Query         psy3308
Match_columns 838
No_of_seqs    408 out of 4759
Neff          11.3
Searched_HMMs 46136
Date          Fri Aug 16 21:40:16 2013
Command       hhsearch -i /work/01045/syshi/Psyhhblits/psy3308.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/3308hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG4177|consensus              100.0 7.1E-69 1.5E-73  581.8  36.8  643    4-782     5-653 (1143)
  2 KOG4177|consensus              100.0 5.9E-67 1.3E-71  566.9  36.3  625   96-814    22-653 (1143)
  3 PHA02876 ankyrin repeat protei 100.0 2.5E-53 5.5E-58  478.2  47.3  469  287-802    27-503 (682)
  4 PHA02876 ankyrin repeat protei 100.0 1.8E-52 3.9E-57  471.3  47.4  462  305-816     6-487 (682)
  5 PHA02917 ankyrin-like protein; 100.0 1.1E-49 2.3E-54  432.4  44.7  450  280-801    11-514 (661)
  6 PHA02917 ankyrin-like protein; 100.0 9.1E-49   2E-53  425.1  44.9  427   75-552    12-513 (661)
  7 PHA02946 ankyin-like protein;  100.0 2.6E-46 5.6E-51  392.0  43.3  370    4-449     2-378 (446)
  8 PHA02730 ankyrin-like protein; 100.0 1.4E-46 3.1E-51  393.7  41.1  416  315-800    21-525 (672)
  9 PHA02946 ankyin-like protein;  100.0 7.2E-46 1.6E-50  388.7  45.3  333   96-514    38-377 (446)
 10 PHA02730 ankyrin-like protein; 100.0 5.5E-45 1.2E-49  381.8  40.3  425   75-520    20-526 (672)
 11 PHA02716 CPXV016; CPX019; EVM0 100.0 3.4E-45 7.4E-50  391.9  36.5  349  435-802   151-569 (764)
 12 PHA02716 CPXV016; CPX019; EVM0 100.0 4.7E-44   1E-48  383.2  39.8  391  104-549   151-591 (764)
 13 KOG0510|consensus              100.0 7.2E-44 1.6E-48  361.8  28.4  350  439-811    41-416 (929)
 14 PHA02874 ankyrin repeat protei 100.0   1E-42 2.3E-47  370.7  38.6  315  430-806     5-322 (434)
 15 PHA02874 ankyrin repeat protei 100.0 4.9E-41 1.1E-45  357.8  40.9  310  423-794    32-344 (434)
 16 KOG0510|consensus              100.0 9.8E-42 2.1E-46  346.3  31.3  366  314-713    41-416 (929)
 17 PHA03095 ankyrin-like protein; 100.0 4.1E-40 8.8E-45  358.1  33.6  289  465-770    20-320 (471)
 18 PHA03095 ankyrin-like protein; 100.0 2.6E-40 5.7E-45  359.5  31.4  289   69-363    21-319 (471)
 19 PHA03100 ankyrin repeat protei 100.0 5.8E-40 1.3E-44  357.4  31.8  281  505-802    15-312 (480)
 20 PHA03100 ankyrin repeat protei 100.0 4.6E-39   1E-43  350.4  32.1  289   72-395    12-311 (480)
 21 KOG0508|consensus              100.0 4.5E-39 9.8E-44  305.8  27.1  215    2-248    13-236 (615)
 22 PHA02878 ankyrin repeat protei 100.0 1.2E-38 2.6E-43  343.6  31.5  294  492-808    37-341 (477)
 23 PHA02792 ankyrin-like protein; 100.0 1.2E-37 2.7E-42  322.6  36.8  429  283-800    20-480 (631)
 24 KOG0508|consensus              100.0 5.1E-38 1.1E-42  298.7  26.8  155  192-355    82-236 (615)
 25 PHA02989 ankyrin repeat protei 100.0 9.7E-38 2.1E-42  337.2  32.5  283  470-799    14-315 (494)
 26 PHA02791 ankyrin-like protein; 100.0 1.4E-37 3.1E-42  301.0  28.1  236  535-800     9-247 (284)
 27 PHA02878 ankyrin repeat protei 100.0 3.9E-37 8.5E-42  331.8  33.4  306  455-783    33-349 (477)
 28 PHA02989 ankyrin repeat protei 100.0 6.2E-37 1.3E-41  331.0  32.9  284   70-358    11-313 (494)
 29 PHA02791 ankyrin-like protein; 100.0 3.2E-37 6.9E-42  298.6  27.2  217  585-807     9-228 (284)
 30 KOG4412|consensus              100.0 7.8E-38 1.7E-42  258.0  16.6  205  577-782     5-213 (226)
 31 KOG4412|consensus              100.0 9.2E-38   2E-42  257.5  15.9  204  609-813     4-212 (226)
 32 PHA02792 ankyrin-like protein; 100.0 1.7E-35 3.7E-40  306.7  36.5  217  132-356     7-239 (631)
 33 PHA02875 ankyrin repeat protei 100.0 4.2E-36 9.1E-41  319.2  30.3  240  576-815     3-248 (413)
 34 PHA02798 ankyrin-like protein; 100.0 1.8E-35 3.9E-40  319.1  29.7  284  471-802    17-320 (489)
 35 PHA02798 ankyrin-like protein; 100.0   1E-34 2.2E-39  313.3  28.2  288   72-363    15-320 (489)
 36 KOG4369|consensus              100.0 1.3E-35 2.9E-40  308.3  20.2  322  457-795   755-1082(2131)
 37 PHA02875 ankyrin repeat protei 100.0 5.3E-34 1.2E-38  303.1  30.8  251  526-793     3-261 (413)
 38 KOG4369|consensus              100.0 2.3E-34 5.1E-39  299.1  18.6  319  492-827   757-1081(2131)
 39 KOG0509|consensus              100.0 2.4E-32 5.3E-37  273.3  17.6  207  577-783    46-255 (600)
 40 KOG0509|consensus              100.0 1.3E-31 2.8E-36  268.1  18.1  207  609-815    45-255 (600)
 41 PHA02795 ankyrin-like protein; 100.0 1.7E-30 3.7E-35  260.0  21.4  207  590-803    64-292 (437)
 42 PHA02795 ankyrin-like protein; 100.0 6.2E-29 1.3E-33  248.9  20.5  234  556-801    63-318 (437)
 43 PHA02859 ankyrin repeat protei 100.0 2.6E-28 5.5E-33  229.1  20.9  174  640-816    20-203 (209)
 44 PHA02859 ankyrin repeat protei 100.0 8.1E-28 1.8E-32  225.7  21.3  175  607-784    20-203 (209)
 45 KOG0502|consensus               99.9 1.1E-27 2.3E-32  204.7  10.0  230  575-807    62-292 (296)
 46 KOG0502|consensus               99.9   8E-28 1.7E-32  205.5   8.7  236  524-778    61-296 (296)
 47 KOG0507|consensus               99.9 3.4E-26 7.3E-31  231.9  16.2  239  577-816     5-265 (854)
 48 KOG0507|consensus               99.9 8.7E-25 1.9E-29  221.8  15.2  262  529-795     7-279 (854)
 49 PLN03192 Voltage-dependent pot  99.9 7.7E-24 1.7E-28  241.6  23.6  164  641-806   525-688 (823)
 50 TIGR00870 trp transient-recept  99.9 5.6E-24 1.2E-28  242.2  19.1  220  574-797    16-281 (743)
 51 PLN03192 Voltage-dependent pot  99.9 2.6E-23 5.7E-28  237.3  24.2  194  588-785   507-701 (823)
 52 KOG0514|consensus               99.9   2E-23 4.3E-28  193.1  11.0  161  634-795   261-429 (452)
 53 PHA02743 Viral ankyrin protein  99.9 8.4E-23 1.8E-27  184.1  14.6  146  663-808     9-163 (166)
 54 KOG0505|consensus               99.9 7.6E-23 1.6E-27  200.6  13.0  225  577-814    42-273 (527)
 55 TIGR00870 trp transient-recept  99.9 2.3E-22   5E-27  229.0  17.8  225   97-325    19-281 (743)
 56 PHA02743 Viral ankyrin protein  99.9 1.8E-21 3.9E-26  175.5  14.8  145  630-774     9-162 (166)
 57 KOG0514|consensus               99.9 2.1E-21 4.6E-26  179.8  13.5  168  588-762   254-429 (452)
 58 KOG0505|consensus               99.9 1.9E-21 4.1E-26  190.9  13.4  226  528-782    43-273 (527)
 59 PHA02741 hypothetical protein;  99.8 1.4E-20 2.9E-25  171.0  14.3  131  669-799    16-158 (169)
 60 PHA02884 ankyrin repeat protei  99.8   6E-20 1.3E-24  177.6  16.6  146  644-797    36-186 (300)
 61 PHA02736 Viral ankyrin protein  99.8 2.3E-20   5E-25  167.4  11.6  132  668-801    11-154 (154)
 62 PHA02741 hypothetical protein;  99.8 1.5E-19 3.3E-24  164.1  14.4  131  636-766    16-158 (169)
 63 KOG0512|consensus               99.8 1.7E-19 3.6E-24  148.7  12.4  138  678-815    67-208 (228)
 64 PHA02884 ankyrin repeat protei  99.8 4.1E-19 8.8E-24  171.9  16.4  146  611-764    36-186 (300)
 65 PF12796 Ank_2:  Ankyrin repeat  99.8 1.7E-18 3.6E-23  139.0  11.9   89  711-803     1-89  (89)
 66 PHA02736 Viral ankyrin protein  99.8 1.1E-18 2.4E-23  156.5  12.0  129  637-767    13-153 (154)
 67 KOG0512|consensus               99.8 3.1E-18 6.8E-23  141.2  12.7  141  644-784    66-209 (228)
 68 KOG0195|consensus               99.7 1.2E-17 2.7E-22  149.7  10.0  144  659-802    19-162 (448)
 69 PF12796 Ank_2:  Ankyrin repeat  99.7 4.3E-17 9.3E-22  130.8  11.7   88   99-190     1-88  (89)
 70 KOG0195|consensus               99.7 3.8E-17 8.3E-22  146.5   9.7  123   80-202    19-141 (448)
 71 cd00204 ANK ankyrin repeats;    99.7 5.7E-16 1.2E-20  135.2  15.4  124  670-793     3-126 (126)
 72 KOG3676|consensus               99.7 2.3E-16   5E-21  163.8  14.7  123  673-795   183-330 (782)
 73 KOG4214|consensus               99.7   2E-16 4.4E-21  115.4   8.4  103  709-812     4-106 (117)
 74 KOG3676|consensus               99.7 1.5E-15 3.3E-20  157.8  16.6  208  577-784   103-368 (782)
 75 cd00204 ANK ankyrin repeats;    99.7 2.4E-15 5.1E-20  131.2  15.2  124   91-214     3-126 (126)
 76 KOG4214|consensus               99.6 5.3E-15 1.1E-19  108.1   8.3  103  676-779     4-106 (117)
 77 PF13637 Ank_4:  Ankyrin repeat  99.5 1.6E-13 3.4E-18   96.9   6.7   54  740-793     1-54  (54)
 78 COG0666 Arp FOG: Ankyrin repea  99.5 7.2E-13 1.6E-17  130.2  13.9  126  671-796    70-203 (235)
 79 KOG1710|consensus               99.5 4.5E-13 9.7E-18  120.8  11.0  116  676-791    14-130 (396)
 80 PF13857 Ank_5:  Ankyrin repeat  99.4 2.4E-13 5.2E-18   96.1   4.6   55  726-780     1-56  (56)
 81 PF13637 Ank_4:  Ankyrin repeat  99.4   9E-13   2E-17   93.0   6.7   52   96-147     2-53  (54)
 82 COG0666 Arp FOG: Ankyrin repea  99.4 4.4E-12 9.5E-17  124.5  14.0  128   90-217    68-203 (235)
 83 KOG0515|consensus               99.4 1.3E-12 2.9E-17  127.8   9.7  116  679-794   555-673 (752)
 84 PTZ00322 6-phosphofructo-2-kin  99.4 2.1E-12 4.7E-17  143.1  12.3   99  710-808    85-190 (664)
 85 KOG1710|consensus               99.4 4.8E-12   1E-16  114.2  11.0  119  609-727    13-132 (396)
 86 PF13857 Ank_5:  Ankyrin repeat  99.3 1.4E-12 3.1E-17   92.2   4.7   54  759-812     1-56  (56)
 87 PTZ00322 6-phosphofructo-2-kin  99.3 7.6E-12 1.7E-16  138.7  12.2  106  643-748    84-196 (664)
 88 KOG0515|consensus               99.3 8.7E-12 1.9E-16  122.2  10.0   91   99-189   554-644 (752)
 89 PF13606 Ank_3:  Ankyrin repeat  98.9 2.7E-09 5.8E-14   63.3   4.1   29  772-800     1-29  (30)
 90 KOG0783|consensus               98.9 1.3E-09 2.8E-14  113.2   3.7   81  734-814    46-128 (1267)
 91 KOG0506|consensus               98.8 2.9E-09 6.2E-14  103.5   5.3   94  704-797   503-597 (622)
 92 PF00023 Ank:  Ankyrin repeat H  98.8 6.2E-09 1.3E-13   64.1   4.3   33  772-804     1-33  (33)
 93 PF13606 Ank_3:  Ankyrin repeat  98.8 1.1E-08 2.3E-13   60.7   3.9   30  739-768     1-30  (30)
 94 KOG0782|consensus               98.7 3.5E-08 7.5E-13   98.1   8.3  117   99-215   870-988 (1004)
 95 KOG0783|consensus               98.7   1E-08 2.2E-13  106.8   3.7   83  667-749    45-128 (1267)
 96 PF00023 Ank:  Ankyrin repeat H  98.7 3.1E-08 6.6E-13   61.0   4.5   33  739-771     1-33  (33)
 97 KOG0782|consensus               98.7 5.9E-08 1.3E-12   96.6   8.7  117  678-794   870-988 (1004)
 98 KOG0818|consensus               98.6 1.8E-07 3.9E-12   91.8   9.3   84  711-794   137-221 (669)
 99 KOG0506|consensus               98.6 5.6E-08 1.2E-12   94.8   5.5   91  672-762   504-595 (622)
100 KOG0818|consensus               98.4 1.2E-06 2.6E-11   86.2   9.3   85   99-183   137-222 (669)
101 KOG3609|consensus               98.3 2.6E-06 5.7E-11   90.7  10.7   82  642-730    26-111 (822)
102 KOG0705|consensus               98.3 1.7E-06 3.7E-11   86.9   8.0   90  710-799   627-720 (749)
103 KOG2384|consensus               98.3 1.7E-06 3.7E-11   74.0   6.9   65  731-795     3-68  (223)
104 KOG2384|consensus               98.3 1.6E-06 3.4E-11   74.3   6.2   70   85-154     2-72  (223)
105 KOG0511|consensus               98.3 2.7E-06 5.8E-11   80.9   8.3   67  677-743    39-105 (516)
106 KOG0522|consensus               98.3 2.3E-06   5E-11   85.7   7.9   64  731-794    46-109 (560)
107 KOG3609|consensus               98.2 5.1E-06 1.1E-10   88.7   9.4  121  575-702    25-159 (822)
108 KOG0705|consensus               98.2 5.9E-06 1.3E-10   83.2   8.4   89  131-219   627-719 (749)
109 KOG0511|consensus               98.2 4.7E-06   1E-10   79.3   7.3   67   99-165    40-106 (516)
110 KOG0521|consensus               98.0 4.5E-06 9.7E-11   92.2   4.2  113  673-793   630-742 (785)
111 KOG0522|consensus               97.9 3.3E-05 7.2E-10   77.6   7.7   86  643-728    22-109 (560)
112 KOG0521|consensus               97.8 8.6E-06 1.9E-10   90.0   2.9   87  736-823   652-739 (785)
113 KOG0520|consensus               97.8 2.7E-05 5.8E-10   85.4   6.0  126  670-795   570-702 (975)
114 KOG0520|consensus               97.8   2E-05 4.4E-10   86.3   4.5  123  701-825   568-699 (975)
115 PF03158 DUF249:  Multigene fam  97.2  0.0025 5.5E-08   55.3   8.9  139   96-248    47-191 (192)
116 PF03158 DUF249:  Multigene fam  97.1  0.0043 9.3E-08   54.0   9.6  137  610-760    48-190 (192)
117 KOG2505|consensus               96.9  0.0012 2.7E-08   66.0   4.7   61  721-781   405-471 (591)
118 smart00248 ANK ankyrin repeats  96.8  0.0024 5.2E-08   37.6   4.0   28  773-800     2-29  (30)
119 smart00248 ANK ankyrin repeats  96.5  0.0054 1.2E-07   36.0   4.0   28  740-767     2-29  (30)
120 PF06128 Shigella_OspC:  Shigel  96.4    0.03 6.5E-07   50.3   9.5   46  752-797   229-278 (284)
121 KOG2505|consensus               96.4  0.0038 8.3E-08   62.7   4.5   62  753-814   404-472 (591)
122 PF06128 Shigella_OspC:  Shigel  95.9   0.031 6.8E-07   50.2   7.1   46  107-152   229-278 (284)
123 PLN03081 pentatricopeptide (PP  94.1      14 0.00031   42.7  25.5   18   26-43    165-182 (697)
124 PLN03218 maturation of RBCL 1;  93.5     3.1 6.7E-05   49.6  17.4  361    2-394   382-788 (1060)
125 PF11929 DUF3447:  Domain of un  92.8    0.17 3.7E-06   38.3   4.0   18  165-182    10-27  (76)
126 PF11929 DUF3447:  Domain of un  92.6    0.22 4.8E-06   37.7   4.4   48  195-249     7-54  (76)
127 PLN03081 pentatricopeptide (PP  92.2      27 0.00058   40.4  27.5  276   97-396   128-427 (697)
128 PLN03218 maturation of RBCL 1;  89.4     7.6 0.00016   46.5  14.9  311   25-361   443-788 (1060)
129 PLN03077 Protein ECB2; Provisi  88.1      66  0.0014   38.4  39.7  208   96-323   125-348 (857)
130 PLN03077 Protein ECB2; Provisi  84.4      99  0.0021   36.9  37.1  322   24-380   125-471 (857)
131 PF04053 Coatomer_WDAD:  Coatom  58.4      25 0.00055   37.5   6.5   93    6-116   299-397 (443)
132 cd07920 Pumilio Pumilio-family  50.7 1.5E+02  0.0033   30.1  10.9   24  457-480    19-42  (322)
133 cd07920 Pumilio Pumilio-family  41.7   1E+02  0.0022   31.4   8.0  112  704-817   162-291 (322)
134 KOG1709|consensus               34.1      36 0.00078   31.4   2.6   39  727-765     2-40  (271)
135 PF04053 Coatomer_WDAD:  Coatom  21.4 1.6E+02  0.0036   31.5   5.3  128   99-248   268-397 (443)
136 cd03572 ENTH_epsin_related ENT  21.1 5.1E+02   0.011   21.8   7.2   62   74-149    58-119 (122)
137 KOG1709|consensus               21.1      82  0.0018   29.2   2.5   39  148-186     2-40  (271)

No 1  
>KOG4177|consensus
Probab=100.00  E-value=7.1e-69  Score=581.79  Aligned_cols=643  Identities=47%  Similarity=0.735  Sum_probs=435.9

Q ss_pred             chHHHHHHHhhcCCCCCCCCcHHhHHHhcCCHHHHHHHHhccccccchhhcccCcchhhhccchhhhhcCcHHHHHHHHH
Q psy3308           4 GHDRVVAVLLENDTKGKVKLPALHIAAKKDDCKAAALLLEVSFSNTKLEVSLSNTKLEVSLSNTKFEATGQEEVAKILVD   83 (838)
Q Consensus         4 g~~~iv~~l~~~~~~~~~~~~al~~Aa~~g~~~~v~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~v~~l~~   83 (838)
                      ||-++|--+..+..++  ...+|+.||++|..+.+..|++..                                      
T Consensus         5 g~~~~~a~~~~~~~~~--~~~~l~~a~r~~~~~~~~~l~~~e--------------------------------------   44 (1143)
T KOG4177|consen    5 GHDRAVAVLLENDVKG--RLPALHIAARNDDTNAAKLLLQNE--------------------------------------   44 (1143)
T ss_pred             ccccccccccccCccc--cchHHHHHHhccchhhcccccccc--------------------------------------
Confidence            7777888888888888  456799999999999999888710                                      


Q ss_pred             CCCCcccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCc
Q psy3308          84 NGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLT  163 (838)
Q Consensus        84 ~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~~l~~Aa~~g~~~iv~~L~~~~~~~~~~~~~~~t  163 (838)
                        .........+.||+|+|+-.|+.+++++|+.+++..+.....|.+|||.|++.|+.++|+.|+..|+.++..+..+.|
T Consensus        45 --~~~~~~sk~~~~pl~~aa~~~~~~v~~~ll~~~a~v~~~~~~~~~plh~a~~~~~a~~v~~ll~~ga~~~~~~~~~lT  122 (1143)
T KOG4177|consen   45 --HNADVDSKSGFTPLHIAAHYGNENVAELLLNRGAIVNATARNGITPLHVASKRGDAEMVKLLLCRGAQIDARDRDGLT  122 (1143)
T ss_pred             --cccchhcccccCHHHHHhhhhhhhhhhhhhccccccCcccccCccHHHHHHhhcchhHHHHHHhccCchhhcccCCCc
Confidence              001111226789999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHcCCHHHHHHHHHcCCCccCCCCCCccHHHHHHhCCcHHHHHHHHhCCCCCCcccCCCccHHHHHHhcCCHHHH
Q psy3308         164 PLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVA  243 (838)
Q Consensus       164 al~~A~~~g~~~iv~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~iv  243 (838)
                      |||.|+..|+.+++.+|+..+++.+.+++.|.+|+++|+.   ...++++.++..      .+.. +++.|+.+++.+++
T Consensus       123 pLh~aa~~g~~~~~~~ll~~~a~~~~k~~~g~t~l~~a~~---~~~~~ll~~~~~------~d~l-~~~~~~~~~~~~~~  192 (1143)
T KOG4177|consen  123 PLHCAARKGHVQVIELLLQHGAPINIKTKNGLSPLHMAAQ---VACARLLLEYKA------PDYL-RLHVAAHCGHARVA  192 (1143)
T ss_pred             chhhhcccccHHHHHHHHHccCCCcccccCCCCchhhhcc---hhhhHHhhhccc------chhh-hhhHHhhcchHHHH
Confidence            9999999999999999999999999999999999999998   777788877644      2333 66888888888888


Q ss_pred             HHHHHCCCCccccccCCCchHHHHHhhCCccccccChHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhC
Q psy3308         244 KTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLLKY  323 (838)
Q Consensus       244 ~~L~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~i~~~Ll~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~L~~~  323 (838)
                      ++|+...++++..+..+.||++.||..+        .++++++++.+|+++...+..|.+|||.|+..|+++++++|+++
T Consensus       193 ~ll~~~~~~~~a~~~~~~tpl~~a~~~n--------ri~~~eLll~~gadv~a~d~~gl~~lh~a~~~g~~~i~~~l~~~  264 (1143)
T KOG4177|consen  193 KLLLDKKADPNASALNGFTPLHIACKKN--------RIKVVELLLKHGADVSAKDESGLTPLHVAAFMGHLDIVKLLLQH  264 (1143)
T ss_pred             hhhhcccCCccccccCCCCchhhhcccc--------ccceeeeeeeccCcCCcccccCccHHHHHHhccchhHHHHHHhc
Confidence            8888877777766555555555555544        23345555555555555555555555555555555555555555


Q ss_pred             CCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCccccccCCCCH
Q psy3308         324 GASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTP  403 (838)
Q Consensus       324 ~~~~~~~~~~~~~~l~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~l~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~  403 (838)
                      |+.++..+..+.||+|.|+..+..++.++|++.|+++........++++.|...|.                        
T Consensus       265 ga~~~~~~vr~~tplh~AA~~~~~e~~~~ll~~ga~~~~~~~~~kt~l~~a~~~g~------------------------  320 (1143)
T KOG4177|consen  265 GASVNVSTVRGETPLHMAARAGQVEVCKLLLQNGADVLAKARDDQTPLHIASRLGH------------------------  320 (1143)
T ss_pred             ccccCcccccccCcchhhhccchhhhHhhhhccCcccccccccccChhhhhcccch------------------------
Confidence            55554444445555555555555555555555544444444444444444444444                        


Q ss_pred             HHHHHhhCcccchhhhhhcccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy3308         404 LHVASRLRRFSSASQSALTRVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGA  483 (838)
Q Consensus       404 l~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~iv~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~L~~~~~  483 (838)
                                                         .++++++++.+..++..+..+.+|+|.++..++.++..++...+.
T Consensus       321 -----------------------------------~~i~~~~l~~~~~~~aar~~g~t~lHlaa~~~~~~~~~~l~~~~~  365 (1143)
T KOG4177|consen  321 -----------------------------------EEIVHLLLQAGATPNAARTAGYTPLHLAAKEGQVEVAGALLEHGA  365 (1143)
T ss_pred             -----------------------------------HHHHHHHhhccCCccccCcCCcccccHhhhhhhHHHHHHhhcccc
Confidence                                               444444444444445455555555555555555555555555544


Q ss_pred             CCCCCCCCCChHHHHHHHhCcHHHHHHHHHCCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCchhHHHHHhh
Q psy3308         484 SVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTE  563 (838)
Q Consensus       484 ~~~~~~~~~~~~l~~A~~~~~~e~v~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~l~~  563 (838)
                      .-...+..+.+|++.|+..|..+++++++..|++++...+.|.|||+.|+.+++.++++.+++++..             
T Consensus       366 ~~~~a~~k~~~pl~la~~~g~~~~v~Lll~~ga~~~~~gk~gvTplh~aa~~~~~~~v~l~l~~gA~-------------  432 (1143)
T KOG4177|consen  366 QRRQAEEKGFTPLHLAVKSGRVSVVELLLEAGADPNSAGKNGVTPLHVAAHYGNPRVVKLLLKRGAS-------------  432 (1143)
T ss_pred             ccCcccccCCcchhhhcccCchhHHHhhhhccCCcccCCCCCcceeeehhhccCcceEEEEeccCCC-------------
Confidence            4444455555555555555555555555555555555555555555555555555555555544332             


Q ss_pred             cCCCccccCCCCCcHHHHHHHcC-cHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCC
Q psy3308         564 SGASITATTKKGFTPLHLAAKYG-RMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGY  642 (838)
Q Consensus       564 ~~~~~~~~~~~~~~~l~~a~~~~-~~~~v~~Ll~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~  642 (838)
                          .+..+..|.|++|.|+..| ..+....+++.|.++|.....|.||||+|+..|+.++++.|++.++..+.....+-
T Consensus       433 ----~~~~~~lG~T~lhvaa~~g~~~~~~~~l~~~g~~~n~~s~~G~T~Lhlaaq~Gh~~~~~llle~~~~~~~~~~~~l  508 (1143)
T KOG4177|consen  433 ----PNAKAKLGYTPLHVAAKKGRYLQIARLLLQYGADPNAVSKQGFTPLHLAAQEGHTEVVQLLLEGGANDNLDAKKGL  508 (1143)
T ss_pred             ----hhhHhhcCCChhhhhhhcccHhhhhhhHhhcCCCcchhccccCcchhhhhccCCchHHHHhhhcCCccCccchhcc
Confidence                2333444556666666666 55666666667777777777777777777777777777777777666666666677


Q ss_pred             hHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHH
Q psy3308         643 TPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNV  722 (838)
Q Consensus       643 t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i  722 (838)
                      +++|.|...+...+++.++++|++++.++..|.||||.|+.+|+.++|++|+++|++++.+++.|+||||.|+..|+.+|
T Consensus       509 ~~lhla~~~~~v~~~~~l~~~ga~v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~gAdv~ak~~~G~TPLH~Aa~~G~~~i  588 (1143)
T KOG4177|consen  509 TPLHLAADEDTVKVAKILLEHGANVDLRTGRGYTPLHVAVHYGNVDLVKFLLEHGADVNAKDKLGYTPLHQAAQQGHNDI  588 (1143)
T ss_pred             chhhhhhhhhhHHHHHHHhhcCCceehhcccccchHHHHHhcCCchHHHHhhhCCccccccCCCCCChhhHHHHcChHHH
Confidence            77777777777777777777777777777777777777777777777777777777777777777777777777777777


Q ss_pred             HHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCC-----CccCCCCCCcHHHHHHH
Q psy3308         723 ATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGAN-----VNATTNLGYTPLHQASQ  782 (838)
Q Consensus       723 ~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~-----~~~~~~~g~t~l~~A~~  782 (838)
                      +.+|+++|+.+|..|.+|.|||++|+..|+++++++|+..+++     +......|.+|...+-.
T Consensus       589 ~~LLlk~GA~vna~d~~g~TpL~iA~~lg~~~~~k~l~~~~~~~~~~~~~~e~~~g~~p~~v~e~  653 (1143)
T KOG4177|consen  589 AELLLKHGASVNAADLDGFTPLHIAVRLGYLSVVKLLKVVTATPAATDPVKENRKGAVPEDVAEE  653 (1143)
T ss_pred             HHHHHHcCCCCCcccccCcchhHHHHHhcccchhhHHHhccCccccccchhhhhcccChhhHHHH
Confidence            7777777777777777777777777777777777777777666     55555566777666553


No 2  
>KOG4177|consensus
Probab=100.00  E-value=5.9e-67  Score=566.86  Aligned_cols=625  Identities=44%  Similarity=0.721  Sum_probs=536.2

Q ss_pred             CcHHHHHHHcCcHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcHHHHHHHcCCHH
Q psy3308          96 FTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDN  175 (838)
Q Consensus        96 ~t~l~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~~l~~Aa~~g~~~iv~~L~~~~~~~~~~~~~~~tal~~A~~~g~~~  175 (838)
                      ...||.|+++|..+.++.|++.....+.....+.||+|.|+..|+.+++++|+..++.++.....|.||||.|++.|+.+
T Consensus        22 ~~~l~~a~r~~~~~~~~~l~~~e~~~~~~sk~~~~pl~~aa~~~~~~v~~~ll~~~a~v~~~~~~~~~plh~a~~~~~a~  101 (1143)
T KOG4177|consen   22 LPALHIAARNDDTNAAKLLLQNEHNADVDSKSGFTPLHIAAHYGNENVAELLLNRGAIVNATARNGITPLHVASKRGDAE  101 (1143)
T ss_pred             chHHHHHHhccchhhcccccccccccchhcccccCHHHHHhhhhhhhhhhhhhccccccCcccccCccHHHHHHhhcchh
Confidence            45699999999999999999887776667778899999999999999999999999998888999999999999999999


Q ss_pred             HHHHHHHcCCCccCCCCCCccHHHHHHhCCcHHHHHHHHhCCCCCCcccCCCccHHHHHHhcCCHHHHHHHHHCCCCccc
Q psy3308         176 VIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKADPNA  255 (838)
Q Consensus       176 iv~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~iv~~L~~~~~~~~~  255 (838)
                      +++.|+..|+..+..+..+.||||.|+..|+.+++.+|++++++.+..+..+.+|+++|+.   ...++++.++..    
T Consensus       102 ~v~~ll~~ga~~~~~~~~~lTpLh~aa~~g~~~~~~~ll~~~a~~~~k~~~g~t~l~~a~~---~~~~~ll~~~~~----  174 (1143)
T KOG4177|consen  102 MVKLLLCRGAQIDARDRDGLTPLHCAARKGHVQVIELLLQHGAPINIKTKNGLSPLHMAAQ---VACARLLLEYKA----  174 (1143)
T ss_pred             HHHHHHhccCchhhcccCCCcchhhhcccccHHHHHHHHHccCCCcccccCCCCchhhhcc---hhhhHHhhhccc----
Confidence            9999999999888888888889998888888888888888888888888888888888887   666677766543    


Q ss_pred             cccCCCchHHHHHhhCCccccccChHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCC
Q psy3308         256 RALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGL  335 (838)
Q Consensus       256 ~~~~~~~~l~~a~~~~~~~~~~~~~~~i~~~Ll~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~  335 (838)
                      .  .-. +++.+...+        +.++.+++.....+++..+.++.||+|.|+..+.+++++.++.+|+++...+..+.
T Consensus       175 ~--d~l-~~~~~~~~~--------~~~~~~ll~~~~~~~~a~~~~~~tpl~~a~~~nri~~~eLll~~gadv~a~d~~gl  243 (1143)
T KOG4177|consen  175 P--DYL-RLHVAAHCG--------HARVAKLLLDKKADPNASALNGFTPLHIACKKNRIKVVELLLKHGADVSAKDESGL  243 (1143)
T ss_pred             c--hhh-hhhHHhhcc--------hHHHHhhhhcccCCccccccCCCCchhhhccccccceeeeeeeccCcCCcccccCc
Confidence            1  111 334444332        55566666666666666666666777777776777777766666666666666666


Q ss_pred             cHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCccccccCCCCHHHHHHhhCcccc
Q psy3308         336 TPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSS  415 (838)
Q Consensus       336 ~~l~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~l~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~~~~~~~~~~  415 (838)
                      +||+.|+..|+++++.+++.+|+.++..+..+.||++.|+..+..|+.++|++                           
T Consensus       244 ~~lh~a~~~g~~~i~~~l~~~ga~~~~~~vr~~tplh~AA~~~~~e~~~~ll~---------------------------  296 (1143)
T KOG4177|consen  244 TPLHVAAFMGHLDIVKLLLQHGASVNVSTVRGETPLHMAARAGQVEVCKLLLQ---------------------------  296 (1143)
T ss_pred             cHHHHHHhccchhHHHHHHhcccccCcccccccCcchhhhccchhhhHhhhhc---------------------------
Confidence            66666666666666666666666666666555555555555555555555554                           


Q ss_pred             hhhhhhcccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCChH
Q psy3308         416 ASQSALTRVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTA  495 (838)
Q Consensus       416 ~~~~~~~~~~~~~~l~~A~~~~~~~iv~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~L~~~~~~~~~~~~~~~~~  495 (838)
                                                      +|+++........+|++.+...|..++++++++.++.++..+..+.++
T Consensus       297 --------------------------------~ga~~~~~~~~~kt~l~~a~~~g~~~i~~~~l~~~~~~~aar~~g~t~  344 (1143)
T KOG4177|consen  297 --------------------------------NGADVLAKARDDQTPLHIASRLGHEEIVHLLLQAGATPNAARTAGYTP  344 (1143)
T ss_pred             --------------------------------cCcccccccccccChhhhhcccchHHHHHHHhhccCCccccCcCCccc
Confidence                                            445555566677899999999999999999999999999999999999


Q ss_pred             HHHHHHhCcHHHHHHHHHCCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCchhHHHHHhhcCCCccccCCCC
Q psy3308         496 LHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKG  575 (838)
Q Consensus       496 l~~A~~~~~~e~v~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  575 (838)
                      +|.++..++.++..++.+.+..-...++.+.+|++.|+.+|+.+.++.++..+..                 .+...+.|
T Consensus       345 lHlaa~~~~~~~~~~l~~~~~~~~~a~~k~~~pl~la~~~g~~~~v~Lll~~ga~-----------------~~~~gk~g  407 (1143)
T KOG4177|consen  345 LHLAAKEGQVEVAGALLEHGAQRRQAEEKGFTPLHLAVKSGRVSVVELLLEAGAD-----------------PNSAGKNG  407 (1143)
T ss_pred             ccHhhhhhhHHHHHHhhccccccCcccccCCcchhhhcccCchhHHHhhhhccCC-----------------cccCCCCC
Confidence            9999999999999999999888888889999999999999999999999987765                 45667789


Q ss_pred             CcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcC-CHHHHHHHHhCCCCCCccCCCCChHHHHHHHcCcH
Q psy3308         576 FTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYD-HQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQM  654 (838)
Q Consensus       576 ~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~A~~~~-~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~  654 (838)
                      .||||.|+..++.++|+.++++|++.+..+..|.||+|.|+..+ ..++...+++.|.+++.....|.||||.|++.|+.
T Consensus       408 vTplh~aa~~~~~~~v~l~l~~gA~~~~~~~lG~T~lhvaa~~g~~~~~~~~l~~~g~~~n~~s~~G~T~Lhlaaq~Gh~  487 (1143)
T KOG4177|consen  408 VTPLHVAAHYGNPRVVKLLLKRGASPNAKAKLGYTPLHVAAKKGRYLQIARLLLQYGADPNAVSKQGFTPLHLAAQEGHT  487 (1143)
T ss_pred             cceeeehhhccCcceEEEEeccCCChhhHhhcCCChhhhhhhcccHhhhhhhHhhcCCCcchhccccCcchhhhhccCCc
Confidence            99999999999999999999999999999999999999999999 88999999999999999999999999999999999


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCC
Q psy3308         655 DIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEID  734 (838)
Q Consensus       655 ~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~  734 (838)
                      ++++.|++.++..+.....+-+++|.|...+...+++.++++|++++.++..+.||||.|+..|++++|++|+++|++++
T Consensus       488 ~~~~llle~~~~~~~~~~~~l~~lhla~~~~~v~~~~~l~~~ga~v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~gAdv~  567 (1143)
T KOG4177|consen  488 EVVQLLLEGGANDNLDAKKGLTPLHLAADEDTVKVAKILLEHGANVDLRTGRGYTPLHVAVHYGNVDLVKFLLEHGADVN  567 (1143)
T ss_pred             hHHHHhhhcCCccCccchhccchhhhhhhhhhHHHHHHHhhcCCceehhcccccchHHHHHhcCCchHHHHhhhCCcccc
Confidence            99999999998888888999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCC-----CCCCCCccch-
Q psy3308         735 PVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQ-----PNATTNLFCC-  808 (838)
Q Consensus       735 ~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ga~-----~~~~~~~~~~-  808 (838)
                      .++..|+||||.|+..|+.+|+.+|+++|+++|..|.+|.|||+.|++.|+++++++|+..|++     +...+..|.+ 
T Consensus       568 ak~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~vna~d~~g~TpL~iA~~lg~~~~~k~l~~~~~~~~~~~~~~e~~~g~~p  647 (1143)
T KOG4177|consen  568 AKDKLGYTPLHQAAQQGHNDIAELLLKHGASVNAADLDGFTPLHIAVRLGYLSVVKLLKVVTATPAATDPVKENRKGAVP  647 (1143)
T ss_pred             ccCCCCCChhhHHHHcChHHHHHHHHHcCCCCCcccccCcchhHHHHHhcccchhhHHHhccCccccccchhhhhcccCh
Confidence            9999999999999999999999999999999999999999999999999999999999999999     7777788888 


Q ss_pred             HHHHHH
Q psy3308         809 ATILVK  814 (838)
Q Consensus       809 ~~~~~~  814 (838)
                      .+....
T Consensus       648 ~~v~e~  653 (1143)
T KOG4177|consen  648 EDVAEE  653 (1143)
T ss_pred             hhHHHH
Confidence            665544


No 3  
>PHA02876 ankyrin repeat protein; Provisional
Probab=100.00  E-value=2.5e-53  Score=478.17  Aligned_cols=469  Identities=23%  Similarity=0.279  Sum_probs=395.6

Q ss_pred             HHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCC-ccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCC
Q psy3308         287 LLDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGAS-IAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATV  365 (838)
Q Consensus       287 Ll~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~L~~~~~~-~~~~~~~~~~~l~~A~~~g~~~iv~~Ll~~~~~~~~~~~  365 (838)
                      |..+|++.+..+..+.||||.|+..|+.|+|++|++.++. +...+..|.||||.|+..++..  ..++......+....
T Consensus        27 ~~~~~~~~~~~~~~~~t~LH~A~~~g~~e~V~~ll~~~~~~~~~~~~~~~tpLh~a~~~~~~~--~~~~~l~~~~~~~~~  104 (682)
T PHA02876         27 LHKHGANQCENESIPFTAIHQALQLRQIDIVEEIIQQNPELIYITDHKCHSTLHTICIIPNVM--DIVISLTLDCDIILD  104 (682)
T ss_pred             HhhhhhhhcccccccchHHHHHHHHHhhhHHHHHHHhCcccchhhchhhccccccccCCCCcc--ccccccccchhhccc
Confidence            5566777777778899999999999999999999999877 4556778999999999988743  333322222222222


Q ss_pred             CCCcHHHHHHHcCcHHHHHHHHHC--CCCccccccCCCCHHHHHHhhCcccchhhhhhcccCCCCHHHHHHHcCCHHHHH
Q psy3308         366 RGETPLHLAARANQTDIVRILLRN--GASVDARAREDQTPLHVASRLRRFSSASQSALTRVRGETPLHLAARANQTDIVR  443 (838)
Q Consensus       366 ~~~~~l~~A~~~g~~~iv~~Ll~~--g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~iv~  443 (838)
                      .+.+.+..+.......+++.|.+.  +.++......                      ......++++.++..++.++++
T Consensus       105 ~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~----------------------~~~~~~~~l~~~i~~~~~~i~k  162 (682)
T PHA02876        105 IKYASIILNKHKLDEACIHILKEAISGNDIHYDKIN----------------------ESIEYMKLIKERIQQDELLIAE  162 (682)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhcCCcccHHhhc----------------------cchhhhHHHHHHHHCCcHHHHH
Confidence            233333333333333333333322  2222111100                      1112345788899999999999


Q ss_pred             HHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCChHHHHHHHhCcHHHHHHHHHCCCCCcccCC
Q psy3308         444 ILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTK  523 (838)
Q Consensus       444 ~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~L~~~~~~~~~~~~~~~~~l~~A~~~~~~e~v~~L~~~~~~~~~~~~  523 (838)
                      +|++.|++++.++..|.||||.|+..|+.+++++|+++|++++..+..|.+||+.|+..++.+++++|++.+.+++.   
T Consensus       163 ~Ll~~Gadvn~~d~~G~TpLh~Aa~~G~~~iv~~LL~~Gad~n~~~~~g~t~L~~A~~~~~~~ivk~Ll~~~~~~~~---  239 (682)
T PHA02876        163 MLLEGGADVNAKDIYCITPIHYAAERGNAKMVNLLLSYGADVNIIALDDLSVLECAVDSKNIDTIKAIIDNRSNINK---  239 (682)
T ss_pred             HHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCccCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCC---
Confidence            99999999999999999999999999999999999999999999999999999999999999999999998877653   


Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHhCCCCCCCchhHHHHHhhcCCCccccCCCCCcHHHHHHHcCcH-HHHHHHHhCCCCCC
Q psy3308         524 KGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRM-KIAQMLLQKDAPVD  602 (838)
Q Consensus       524 ~~~~~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~-~~v~~Ll~~~~~~~  602 (838)
                       +.+++..|+..++.+++++|++.+.                 +++..+..|.||||.|+..++. +++++|++.|++++
T Consensus       240 -~~~~L~~ai~~~~~~~~~~Ll~~g~-----------------~vn~~d~~g~TpLh~Aa~~~~~~~iv~lLl~~gadin  301 (682)
T PHA02876        240 -NDLSLLKAIRNEDLETSLLLYDAGF-----------------SVNSIDDCKNTPLHHASQAPSLSRLVPKLLERGADVN  301 (682)
T ss_pred             -CcHHHHHHHHcCCHHHHHHHHHCCC-----------------CCCCCCCCCCCHHHHHHhCCCHHHHHHHHHHCCCCCC
Confidence             3578999999999999999998765                 3456677899999999999986 69999999999999


Q ss_pred             CCCCCCCcHHHHHHHcC-CHHHHHHHHhCCCCCCccCCCCChHHHHHHHc-CcHHHHHHHHhCCCCCCCCCCCCCcHHHH
Q psy3308         603 SQGKNGVTPLHVASHYD-HQNVALLLLDRGASPHAVAKNGYTPLHIAAKK-NQMDIATTLLEYNAKPNAESKAGFTPLHL  680 (838)
Q Consensus       603 ~~~~~~~~~l~~A~~~~-~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~-~~~~iv~~Ll~~~~~~~~~~~~g~t~L~~  680 (838)
                      .++..|.||||+|+..| ..+++++|+..|++++..+..|.||||.|+.. ++.++++.|++.|++++.++..|.||||+
T Consensus       302 ~~d~~g~TpLh~Aa~~g~~~~~v~~Ll~~gadin~~d~~g~TpLh~A~~~~~~~~iv~lLl~~gadin~~d~~G~TpLh~  381 (682)
T PHA02876        302 AKNIKGETPLYLMAKNGYDTENIRTLIMLGADVNAADRLYITPLHQASTLDRNKDIVITLLELGANVNARDYCDKTPIHY  381 (682)
T ss_pred             CcCCCCCCHHHHHHHhCCCHHHHHHHHHcCCCCCCcccCCCcHHHHHHHhCCcHHHHHHHHHcCCCCccCCCCCCCHHHH
Confidence            99999999999999999 59999999999999999999999999999985 57899999999999999999999999999


Q ss_pred             HHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCC-HHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcC-CHHHHHH
Q psy3308         681 SAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDK-VNVATITMFNGAEIDPVTKAGFTPLHIASHFG-QLNMVRY  758 (838)
Q Consensus       681 A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~-~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g-~~~~v~~  758 (838)
                      |+..|+.+++++|+++|++++..+..|.||||+|+..++ ..++++|+++|+++|.+|..|+||||+|+..| +.+++++
T Consensus       382 Aa~~~~~~iv~~Ll~~gad~~~~~~~g~T~Lh~A~~~~~~~~~vk~Ll~~gadin~~d~~G~TpLh~Aa~~~~~~~iv~l  461 (682)
T PHA02876        382 AAVRNNVVIINTLLDYGADIEALSQKIGTALHFALCGTNPYMSVKTLIDRGANVNSKNKDLSTPLHYACKKNCKLDVIEM  461 (682)
T ss_pred             HHHcCCHHHHHHHHHCCCCccccCCCCCchHHHHHHcCCHHHHHHHHHhCCCCCCcCCCCCChHHHHHHHhCCcHHHHHH
Confidence            999999999999999999999999999999999998766 46899999999999999999999999999876 7899999


Q ss_pred             HHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCCCC
Q psy3308         759 LVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNAT  802 (838)
Q Consensus       759 Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ga~~~~~  802 (838)
                      |+++|+++|..|..|.|||++|+..+  ++++.|+.+|+++...
T Consensus       462 Ll~~Gad~n~~d~~g~tpl~~a~~~~--~~v~~Ll~~~a~~~~~  503 (682)
T PHA02876        462 LLDNGADVNAINIQNQYPLLIALEYH--GIVNILLHYGAELRDS  503 (682)
T ss_pred             HHHCCCCCCCCCCCCCCHHHHHHHhC--CHHHHHHHCCCCCCcC
Confidence            99999999999999999999999876  5899999999988754


No 4  
>PHA02876 ankyrin repeat protein; Provisional
Probab=100.00  E-value=1.8e-52  Score=471.33  Aligned_cols=462  Identities=23%  Similarity=0.265  Sum_probs=382.0

Q ss_pred             HHHHHHcCCH-HHHHHH-----HhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCcHHHHHHHc
Q psy3308         305 LHIACKKNRY-KVVELL-----LKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAA-PDTATVRGETPLHLAARA  377 (838)
Q Consensus       305 l~~A~~~g~~-~~v~~L-----~~~~~~~~~~~~~~~~~l~~A~~~g~~~iv~~Ll~~~~~-~~~~~~~~~~~l~~A~~~  377 (838)
                      |+.++..|.. +++..+     +++|++....+..+.||||.|+..||.++|++|++..+. ....+..|.||||+|+..
T Consensus         6 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~LH~A~~~g~~e~V~~ll~~~~~~~~~~~~~~~tpLh~a~~~   85 (682)
T PHA02876          6 LYRIMCRGNCIDILSAIDNYDLHKHGANQCENESIPFTAIHQALQLRQIDIVEEIIQQNPELIYITDHKCHSTLHTICII   85 (682)
T ss_pred             HHHHHhcCchHHHHHHHHHHHHhhhhhhhcccccccchHHHHHHHHHhhhHHHHHHHhCcccchhhchhhccccccccCC
Confidence            5666777766 333333     344655555566788999999999999999999987665 345666788999998887


Q ss_pred             CcHHHHHHHHHCCCCccccccCCCCHHHHHHhhCcccchhhhhhcccCCCCHHHHHHHcC---CHHHHHHHHHCCCCCCC
Q psy3308         378 NQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSASQSALTRVRGETPLHLAARAN---QTDIVRILLRNGASVDA  454 (838)
Q Consensus       378 g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~---~~~iv~~Ll~~~~~~~~  454 (838)
                      ++.  +..+.......+.....+.                          +.+..+....   ..++++-.+. +.++..
T Consensus        86 ~~~--~~~~~~l~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~il~~~~~-~~~~~~  136 (682)
T PHA02876         86 PNV--MDIVISLTLDCDIILDIKY--------------------------ASIILNKHKLDEACIHILKEAIS-GNDIHY  136 (682)
T ss_pred             CCc--cccccccccchhhcccccH--------------------------HHHHHHHHHHHHHHHHHHHHHhc-CCcccH
Confidence            763  3333322211111111111                          1111111111   1223332221 112111


Q ss_pred             ----CCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCChHHHHHHHhCcHHHHHHHHHCCCCCcccCCCCCcHHH
Q psy3308         455 ----RAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLH  530 (838)
Q Consensus       455 ----~~~~~~~~l~~a~~~~~~~~v~~L~~~~~~~~~~~~~~~~~l~~A~~~~~~e~v~~L~~~~~~~~~~~~~~~~~l~  530 (838)
                          ......++++.++..++.+++++|++.|++++..+..|.||||.|+..|+.+++++|++.|++++..+..|.+||+
T Consensus       137 ~~~~~~~~~~~~l~~~i~~~~~~i~k~Ll~~Gadvn~~d~~G~TpLh~Aa~~G~~~iv~~LL~~Gad~n~~~~~g~t~L~  216 (682)
T PHA02876        137 DKINESIEYMKLIKERIQQDELLIAEMLLEGGADVNAKDIYCITPIHYAAERGNAKMVNLLLSYGADVNIIALDDLSVLE  216 (682)
T ss_pred             HhhccchhhhHHHHHHHHCCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCccCCCCCCHHH
Confidence                1123456788999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHcCCHHHHHHHHhCCCCCCCchhHHHHHhhcCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCc
Q psy3308         531 LAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVT  610 (838)
Q Consensus       531 ~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~  610 (838)
                      .|+..|+.+++++|++.+....                     .+.++++.|+..++.+++++|++.|++++..+..|.|
T Consensus       217 ~A~~~~~~~ivk~Ll~~~~~~~---------------------~~~~~L~~ai~~~~~~~~~~Ll~~g~~vn~~d~~g~T  275 (682)
T PHA02876        217 CAVDSKNIDTIKAIIDNRSNIN---------------------KNDLSLLKAIRNEDLETSLLLYDAGFSVNSIDDCKNT  275 (682)
T ss_pred             HHHHcCCHHHHHHHHhcCCCCC---------------------CCcHHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC
Confidence            9999999999999998765432                     2347899999999999999999999999999999999


Q ss_pred             HHHHHHHcCCH-HHHHHHHhCCCCCCccCCCCChHHHHHHHcC-cHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHc-CcH
Q psy3308         611 PLHVASHYDHQ-NVALLLLDRGASPHAVAKNGYTPLHIAAKKN-QMDIATTLLEYNAKPNAESKAGFTPLHLSAQE-GHT  687 (838)
Q Consensus       611 ~l~~A~~~~~~-~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~~-~~~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~~-g~~  687 (838)
                      |||+|+..++. +++++|++.|++++..+..|.||||.|+..| +.++++.|+..|++++..+..|.||||+|+.. ++.
T Consensus       276 pLh~Aa~~~~~~~iv~lLl~~gadin~~d~~g~TpLh~Aa~~g~~~~~v~~Ll~~gadin~~d~~g~TpLh~A~~~~~~~  355 (682)
T PHA02876        276 PLHHASQAPSLSRLVPKLLERGADVNAKNIKGETPLYLMAKNGYDTENIRTLIMLGADVNAADRLYITPLHQASTLDRNK  355 (682)
T ss_pred             HHHHHHhCCCHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCCHHHHHHHHHcCCCCCCcccCCCcHHHHHHHhCCcH
Confidence            99999999986 6999999999999999999999999999999 59999999999999999999999999999985 578


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCC-HHHHHHHHHCCCCC
Q psy3308         688 DMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQ-LNMVRYLVENGANV  766 (838)
Q Consensus       688 ~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~-~~~v~~Ll~~g~~~  766 (838)
                      +++++|++.|++++.++..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..++ ..++++|+++|+++
T Consensus       356 ~iv~lLl~~gadin~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~gad~~~~~~~g~T~Lh~A~~~~~~~~~vk~Ll~~gadi  435 (682)
T PHA02876        356 DIVITLLELGANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGADIEALSQKIGTALHFALCGTNPYMSVKTLIDRGANV  435 (682)
T ss_pred             HHHHHHHHcCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCccccCCCCCchHHHHHHcCCHHHHHHHHHhCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999997665 57899999999999


Q ss_pred             ccCCCCCCcHHHHHHHhC-cHHHHHHHHhCCCCCCCCCCccch-HHHHHHcC
Q psy3308         767 NATTNLGYTPLHQASQQG-RVLIIDLLLGAGAQPNATTNLFCC-ATILVKNG  816 (838)
Q Consensus       767 ~~~~~~g~t~l~~A~~~~-~~~~v~~Ll~~ga~~~~~~~~~~~-~~~~~~~~  816 (838)
                      |.+|..|+||||+|++.+ +.+++++|+++|++++.+|..|.| +.+|+..+
T Consensus       436 n~~d~~G~TpLh~Aa~~~~~~~iv~lLl~~Gad~n~~d~~g~tpl~~a~~~~  487 (682)
T PHA02876        436 NSKNKDLSTPLHYACKKNCKLDVIEMLLDNGADVNAINIQNQYPLLIALEYH  487 (682)
T ss_pred             CcCCCCCChHHHHHHHhCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhC
Confidence            999999999999999976 789999999999999999999999 99988754


No 5  
>PHA02917 ankyrin-like protein; Provisional
Probab=100.00  E-value=1.1e-49  Score=432.40  Aligned_cols=450  Identities=19%  Similarity=0.219  Sum_probs=336.2

Q ss_pred             hHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHc---CCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCCHH----HHHH
Q psy3308         280 HVWVAKTLLDRKADPNARALNGFTPLHIACKK---NRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMN----IAIF  352 (838)
Q Consensus       280 ~~~i~~~Ll~~~~~~~~~~~~~~~~l~~A~~~---g~~~~v~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~----iv~~  352 (838)
                      .++.++.|+..|...+.++.+|.||||.|+..   |+.++|++|++.|++++..+..|.|||+.|+..|+.+    +++.
T Consensus        11 ~~~~~~~l~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~v~~Ll~~ga~v~~~~~~g~TpL~~Aa~~g~~~v~~~~~~~   90 (661)
T PHA02917         11 ALDELKQMLRDRDPNDTRNQFKNNALHAYLFNEHCNNVEVVKLLLDSGTNPLHKNWRQLTPLEEYTNSRHVKVNKDIAMA   90 (661)
T ss_pred             HHHHHHHHHhccCcccccCCCCCcHHHHHHHhhhcCcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCChhHHHHHHHH
Confidence            57789999999999998899999999998665   8899999999999999999999999999999999854    5678


Q ss_pred             HHHcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCccccccCCCCHHHHHHhhCcccchhhhhhcccCCCCHHHH
Q psy3308         353 LLQAGAAPDTATVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSASQSALTRVRGETPLHL  432 (838)
Q Consensus       353 Ll~~~~~~~~~~~~~~~~l~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  432 (838)
                      |++.+...+..+  ...++++|+..|+.+++++|+++|++++..+..|+|||+.+                        .
T Consensus        91 Ll~~~~~~n~~~--~~~~~~~a~~~~~~e~vk~Ll~~Gadin~~d~~g~T~L~~~------------------------~  144 (661)
T PHA02917         91 LLEATGYSNIND--FNIFSYMKSKNVDVDLIKVLVEHGFDLSVKCENHRSVIENY------------------------V  144 (661)
T ss_pred             HHhccCCCCCCC--cchHHHHHhhcCCHHHHHHHHHcCCCCCccCCCCccHHHHH------------------------H
Confidence            887643333333  23567889999999999999999999999887765554322                        2


Q ss_pred             HHHcCCHHHHHHHHHCCCCCCCCCC---CC-----------CcHHHHHHH-----------cCCHHHHHHHHhCCCCCCC
Q psy3308         433 AARANQTDIVRILLRNGASVDARAR---ED-----------QTPLHVASR-----------LGNGDIASLLLQHGASVDA  487 (838)
Q Consensus       433 A~~~~~~~iv~~Ll~~~~~~~~~~~---~~-----------~~~l~~a~~-----------~~~~~~v~~L~~~~~~~~~  487 (838)
                      |+..|+.+++++|+++|++++..+.   .|           .|||++|+.           .++.+++++|+++|++++.
T Consensus       145 a~~~~~~eivklLi~~Ga~vn~~d~~~~~g~~~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadvn~  224 (661)
T PHA02917        145 MTDDPVPEIIDLFIENGCSVLYEDEDDEYGYAYDDYQPRNCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIKPSS  224 (661)
T ss_pred             HccCCCHHHHHHHHHcCCCccccccccccccccccccccccccHHHHHHhhcccccccccccCcHHHHHHHHHCCCCccc
Confidence            3467899999999999999976543   23           599999975           4688999999999999999


Q ss_pred             CCCCCChHHHHHHHhCcH--HHHHHHHHCCCCCc----ccCCCCCcHHHHHHHc---------CCHHHHHHHHhCCCCCC
Q psy3308         488 PTKDGYTALHISAKEGQD--EVASILTESGASIT----ATTKKGFTPLHLAAKY---------GRMKIAQMLLQKDAPVD  552 (838)
Q Consensus       488 ~~~~~~~~l~~A~~~~~~--e~v~~L~~~~~~~~----~~~~~~~~~l~~A~~~---------g~~~~~~~Ll~~~~~~~  552 (838)
                      .+..|.||||+|+..|+.  +++++|++ |++++    ..+..+.+++++|+.-         .+.++++.|++.|..  
T Consensus       225 ~d~~G~TpLh~A~~~g~~~~eivk~Li~-g~d~~~~~~~~~~~~~~~~~~a~yl~~~~~~~~~v~~~iv~~Li~~Ga~--  301 (661)
T PHA02917        225 IDKNYCTALQYYIKSSHIDIDIVKLLMK-GIDNTAYSYIDDLTCCTRGIMADYLNSDYRYNKDVDLDLVKLFLENGKP--  301 (661)
T ss_pred             CCCCCCcHHHHHHHcCCCcHHHHHHHHh-CCcccccccccCcccccchHHHHHHHhhccccccchHHHHHHHHhCCCC--
Confidence            999999999999999985  79999975 77654    3445566777777731         166778888777642  


Q ss_pred             CchhHHHHHhhcCCCccccCCCCCcHHHHHHHcCcHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHcCC--HHHHHHHHh
Q psy3308         553 SQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQ-KDAPVDSQGKNGVTPLHVASHYDH--QNVALLLLD  629 (838)
Q Consensus       553 ~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ll~-~~~~~~~~~~~~~~~l~~A~~~~~--~~~v~~Ll~  629 (838)
                                           .+.++++.++..++.+++++++. .+.++-      .+++..++..|.  .+++++|++
T Consensus       302 ---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~l~~~~~~g~~~~~~v~~Ll~  354 (661)
T PHA02917        302 ---------------------HGIMCSIVPLWRNDKETISLILKTMNSDVL------QHILIEYMTFGDIDIPLVECMLE  354 (661)
T ss_pred             ---------------------CceeEeeecccccchHHHHHHHHHhchHHH------HHHHHHHHHcCCCcHHHHHHHHH
Confidence                                 23456677777777777777774 233320      112233334554  457788888


Q ss_pred             CCCCCCccCCCCChHHHHHHHcCcHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHcCc--HHHHHHHHhCCCCCCCCCCC
Q psy3308         630 RGASPHAVAKNGYTPLHIAAKKNQMDIATTLLE-YNAKPNAESKAGFTPLHLSAQEGH--TDMSSLLIEHGATVSHQAKN  706 (838)
Q Consensus       630 ~g~~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~-~~~~~~~~~~~g~t~L~~A~~~g~--~~iv~~Ll~~g~~~~~~~~~  706 (838)
                      +|++++..+..|.++.    ...+.+++++|+. .|++++..+..|+||||.|++.+.  .+...+...+|         
T Consensus       355 ~GAdvn~~~~~g~~~~----~~~~~~~i~~LL~~~ga~~~~~~~~G~TpL~~a~~~~~~~~~~~~~~~~~~---------  421 (661)
T PHA02917        355 YGAVVNKEAIHGYFRN----INIDSYTMKYLLKKEGGDAVNHLDDGEIPIGHLCKSNYGCYNFYTYTYKKG---------  421 (661)
T ss_pred             cCCCCCCCCccccchh----hcCCHHHHHHHHHhcCCCccccCCCCCChhHHHHHhcccchhhhhhhhhhc---------
Confidence            8888877777776643    3556677777776 576666666667888877765543  23222221211         


Q ss_pred             CCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHH-hCc
Q psy3308         707 GLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQ-QGR  785 (838)
Q Consensus       707 ~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~-~~~  785 (838)
                       ...  .+...+..+++++|+++|+++|.+|..|+||||+|+..++.+++++|+++|+++|..|..|+|||++|+. .++
T Consensus       422 -~~~--~~~~~~~~~~v~~Ll~~GAdIN~kd~~G~TpLh~Aa~~~~~~~v~~Ll~~GAdin~~d~~G~T~L~~A~~~~~~  498 (661)
T PHA02917        422 -LCD--MSYACPILSTINICLPYLKDINMIDKRGETLLHKAVRYNKQSLVSLLLESGSDVNIRSNNGYTCIAIAINESRN  498 (661)
T ss_pred             -cch--hhhhhhhHHHHHHHHHCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHhCCC
Confidence             111  1112235778888888888888888888888888888888888888888888888888888888888885 678


Q ss_pred             HHHHHHHHhCCCCCCC
Q psy3308         786 VLIIDLLLGAGAQPNA  801 (838)
Q Consensus       786 ~~~v~~Ll~~ga~~~~  801 (838)
                      .+++++|+++|++++.
T Consensus       499 ~~iv~~LL~~ga~i~~  514 (661)
T PHA02917        499 IELLKMLLCHKPTLDC  514 (661)
T ss_pred             HHHHHHHHHcCCChhH
Confidence            8888888888888863


No 6  
>PHA02917 ankyrin-like protein; Provisional
Probab=100.00  E-value=9.1e-49  Score=425.11  Aligned_cols=427  Identities=18%  Similarity=0.170  Sum_probs=355.8

Q ss_pred             HHHHHHHHHCCCCcccCCCCCCcHHHHHHHc---CcHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHH----HHHHH
Q psy3308          75 EEVAKILVDNGATINVQSLNGFTPLYMAAQE---NHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVA----MVELL  147 (838)
Q Consensus        75 ~~~v~~l~~~~~~~~~~~~~~~t~l~~A~~~---g~~~~v~~L~~~~~~~~~~~~~~~~~l~~Aa~~g~~~----iv~~L  147 (838)
                      ++.||.|+.+|..++.+|.+|+||||+|+..   |+.++|++|+++|++++..+..|.||||+|+..|+.+    +|+.|
T Consensus        12 ~~~~~~l~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~v~~Ll~~ga~v~~~~~~g~TpL~~Aa~~g~~~v~~~~~~~L   91 (661)
T PHA02917         12 LDELKQMLRDRDPNDTRNQFKNNALHAYLFNEHCNNVEVVKLLLDSGTNPLHKNWRQLTPLEEYTNSRHVKVNKDIAMAL   91 (661)
T ss_pred             HHHHHHHHhccCcccccCCCCCcHHHHHHHhhhcCcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCChhHHHHHHHHH
Confidence            6778999999999999999999999998665   8899999999999999999999999999999999954    56788


Q ss_pred             HHcCCCCccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCccHHHHH--HhCCcHHHHHHHHhCCCCCCcccC
Q psy3308         148 ISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMA--SQGDHEAATRVLIYHGAGVDEITV  225 (838)
Q Consensus       148 ~~~~~~~~~~~~~~~tal~~A~~~g~~~iv~~L~~~~~~~~~~~~~~~~~l~~A--~~~g~~~~v~~L~~~~~~~~~~~~  225 (838)
                      ++.+...+..+  ..+++++|+.+|+.|+|++|+++|++++.++..|.|||+.|  +.+|+.+++++|+++|++++..+.
T Consensus        92 l~~~~~~n~~~--~~~~~~~a~~~~~~e~vk~Ll~~Gadin~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~d~  169 (661)
T PHA02917         92 LEATGYSNIND--FNIFSYMKSKNVDVDLIKVLVEHGFDLSVKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVLYEDE  169 (661)
T ss_pred             HhccCCCCCCC--cchHHHHHhhcCCHHHHHHHHHcCCCCCccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCcccccc
Confidence            88754333333  34678889999999999999999999999999999999954  468999999999999999874432


Q ss_pred             ---CC-----------ccHHHHHHh-----------cCCHHHHHHHHHCCCCccccccCCCchHHHHHhhCCccccccCh
Q psy3308         226 ---DY-----------LTALHVASH-----------CGHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNH  280 (838)
Q Consensus       226 ---~~-----------~~~l~~A~~-----------~g~~~iv~~L~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~  280 (838)
                         .|           .|||++|+.           +|+.++|++|++.|+++|..+..|.||||+|+.+|..      .
T Consensus       170 ~~~~g~~~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadvn~~d~~G~TpLh~A~~~g~~------~  243 (661)
T PHA02917        170 DDEYGYAYDDYQPRNCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIKPSSIDKNYCTALQYYIKSSHI------D  243 (661)
T ss_pred             ccccccccccccccccccHHHHHHhhcccccccccccCcHHHHHHHHHCCCCcccCCCCCCcHHHHHHHcCCC------c
Confidence               22           599999986           5799999999999999999999999999999999843      2


Q ss_pred             HHHHHHHHhCCCCCC----CCCCCCCcHHHHHHHc---------CCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCCH
Q psy3308         281 VWVAKTLLDRKADPN----ARALNGFTPLHIACKK---------NRYKVVELLLKYGASIAATTESGLTPLHVASFMGCM  347 (838)
Q Consensus       281 ~~i~~~Ll~~~~~~~----~~~~~~~~~l~~A~~~---------g~~~~v~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~  347 (838)
                      .+++++|++ |++.+    ..+..|.++++.|++-         .+.++|++|++.|++      .+.+++++++..++.
T Consensus       244 ~eivk~Li~-g~d~~~~~~~~~~~~~~~~~~a~yl~~~~~~~~~v~~~iv~~Li~~Ga~------~~~~~~~~~~~~~~~  316 (661)
T PHA02917        244 IDIVKLLMK-GIDNTAYSYIDDLTCCTRGIMADYLNSDYRYNKDVDLDLVKLFLENGKP------HGIMCSIVPLWRNDK  316 (661)
T ss_pred             HHHHHHHHh-CCcccccccccCcccccchHHHHHHHhhccccccchHHHHHHHHhCCCC------CceeEeeecccccch
Confidence            689999975 77664    3566778888888842         278999999999975      356788899999999


Q ss_pred             HHHHHHHHc-CCCCCCCCCCCCcHHHHHHHcCc--HHHHHHHHHCCCCccccccCCCCHHHHHHhhCcccchhhhhhccc
Q psy3308         348 NIAIFLLQA-GAAPDTATVRGETPLHLAARANQ--TDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSASQSALTRV  424 (838)
Q Consensus       348 ~iv~~Ll~~-~~~~~~~~~~~~~~l~~A~~~g~--~~iv~~Ll~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  424 (838)
                      +++++++.. +.+.-      .+++..++..|.  .+++++|++.|++++..+..|.+                      
T Consensus       317 ~~~~~~~~~~~~~~~------~~~l~~~~~~g~~~~~~v~~Ll~~GAdvn~~~~~g~~----------------------  368 (661)
T PHA02917        317 ETISLILKTMNSDVL------QHILIEYMTFGDIDIPLVECMLEYGAVVNKEAIHGYF----------------------  368 (661)
T ss_pred             HHHHHHHHHhchHHH------HHHHHHHHHcCCCcHHHHHHHHHcCCCCCCCCccccc----------------------
Confidence            999999852 32210      122333444665  66999999999999987665543                      


Q ss_pred             CCCCHHHHHHHcCCHHHHHHHHH-CCCCCCCCCCCCCcHHHHHHHcC-----------------------CHHHHHHHHh
Q psy3308         425 RGETPLHLAARANQTDIVRILLR-NGASVDARAREDQTPLHVASRLG-----------------------NGDIASLLLQ  480 (838)
Q Consensus       425 ~~~~~l~~A~~~~~~~iv~~Ll~-~~~~~~~~~~~~~~~l~~a~~~~-----------------------~~~~v~~L~~  480 (838)
                              +....+.+++++|+. .|++++..+..|.|||+.|++++                       ..++++.|++
T Consensus       369 --------~~~~~~~~~i~~LL~~~ga~~~~~~~~G~TpL~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~  440 (661)
T PHA02917        369 --------RNINIDSYTMKYLLKKEGGDAVNHLDDGEIPIGHLCKSNYGCYNFYTYTYKKGLCDMSYACPILSTINICLP  440 (661)
T ss_pred             --------hhhcCCHHHHHHHHHhcCCCccccCCCCCChhHHHHHhcccchhhhhhhhhhccchhhhhhhhHHHHHHHHH
Confidence                    223567788888887 58777777778999999887543                       3568899999


Q ss_pred             CCCCCCCCCCCCChHHHHHHHhCcHHHHHHHHHCCCCCcccCCCCCcHHHHHHH-cCCHHHHHHHHhCCCCCC
Q psy3308         481 HGASVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAK-YGRMKIAQMLLQKDAPVD  552 (838)
Q Consensus       481 ~~~~~~~~~~~~~~~l~~A~~~~~~e~v~~L~~~~~~~~~~~~~~~~~l~~A~~-~g~~~~~~~Ll~~~~~~~  552 (838)
                      +|++++..+..|.||||+|+..++.+++++|++.|++++..+..|.|||++|+. .++.+++++|+.++++.+
T Consensus       441 ~GAdIN~kd~~G~TpLh~Aa~~~~~~~v~~Ll~~GAdin~~d~~G~T~L~~A~~~~~~~~iv~~LL~~ga~i~  513 (661)
T PHA02917        441 YLKDINMIDKRGETLLHKAVRYNKQSLVSLLLESGSDVNIRSNNGYTCIAIAINESRNIELLKMLLCHKPTLD  513 (661)
T ss_pred             CCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHhCCCHHHHHHHHHcCCChh
Confidence            999999999999999999999999999999999999999999999999999996 689999999999987665


No 7  
>PHA02946 ankyin-like protein; Provisional
Probab=100.00  E-value=2.6e-46  Score=392.04  Aligned_cols=370  Identities=21%  Similarity=0.213  Sum_probs=320.4

Q ss_pred             chHHHHHHHhhcCCCCCCCCcHHhHHHhcCCHHHHHHHHhccccccchhhcccCcchhhhccchhhhhcCcHHHHHHHHH
Q psy3308           4 GHDRVVAVLLENDTKGKVKLPALHIAAKKDDCKAAALLLEVSFSNTKLEVSLSNTKLEVSLSNTKFEATGQEEVAKILVD   83 (838)
Q Consensus         4 g~~~iv~~l~~~~~~~~~~~~al~~Aa~~g~~~~v~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~v~~l~~   83 (838)
                      ++++-|+|+++           +..+..+|+.+.++.++...      ......+.++    ...+...++.++|++|++
T Consensus         2 ~~i~~~~~~~s-----------l~~~~~~~n~~~~~~~l~~~------~~~g~~~~Lh----~~~~~~~~~~~iv~~Ll~   60 (446)
T PHA02946          2 DNIMSAEYYLS-----------LYAKYNSKNLDVFRNMLQAI------EPSGNYHILH----AYCGIKGLDERFVEELLH   60 (446)
T ss_pred             chHHHHHHHHH-----------HHHHHccCcHHHHHHHHhcc------CCCCCChHHH----HHHHhcCCCHHHHHHHHH
Confidence            57788899987           46788899999999999711      1111111221    111235568899999999


Q ss_pred             CCCCcccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCccccCCCcHHHHHHHcC--CHHHHHHHHHcCCCCcc-ccCC
Q psy3308          84 NGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWG--KVAMVELLISKGANIEA-KTRD  160 (838)
Q Consensus        84 ~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~~l~~Aa~~g--~~~iv~~L~~~~~~~~~-~~~~  160 (838)
                      +|+++|.+|..|+||||+|+..|+.++|++|+++|++++.+|..|.||||+|+..+  .++++++|+++|++++. .+..
T Consensus        61 ~Gadvn~~d~~G~TpLh~Aa~~g~~eiv~lLL~~GAdin~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~Gadin~~~d~~  140 (446)
T PHA02946         61 RGYSPNETDDDGNYPLHIASKINNNRIVAMLLTHGADPNACDKQHKTPLYYLSGTDDEVIERINLLVQYGAKINNSVDEE  140 (446)
T ss_pred             CcCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCcccccCCC
Confidence            99999999999999999999999999999999999999999999999999999876  48999999999999984 6889


Q ss_pred             CCcHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCccHHHHHHhC--CcHHHHHHHHhCCCCCCcccCCCccHHHHHHhcC
Q psy3308         161 GLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQG--DHEAATRVLIYHGAGVDEITVDYLTALHVASHCG  238 (838)
Q Consensus       161 ~~tal~~A~~~g~~~iv~~L~~~~~~~~~~~~~~~~~l~~A~~~--g~~~~v~~L~~~~~~~~~~~~~~~~~l~~A~~~g  238 (838)
                      |.|||+ ||..|+.+++++|++.|++++..+..|.|||++|+..  ++.+++++|+++|++++..+..|.||||+|+..|
T Consensus       141 g~tpL~-aa~~~~~~vv~~Ll~~gad~~~~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~Gadin~~d~~G~TpLH~Aa~~~  219 (446)
T PHA02946        141 GCGPLL-ACTDPSERVFKKIMSIGFEARIVDKFGKNHIHRHLMSDNPKASTISWMMKLGISPSKPDHDGNTPLHIVCSKT  219 (446)
T ss_pred             CCcHHH-HHHCCChHHHHHHHhccccccccCCCCCCHHHHHHHhcCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcC
Confidence            999997 7778999999999999999999999999999998775  4579999999999999999999999999999986


Q ss_pred             --CHHHHHHHHHCCCCccccccCCCchHHHHHhhCCccccccChHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHH
Q psy3308         239 --HVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKV  316 (838)
Q Consensus       239 --~~~iv~~L~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~i~~~Ll~~~~~~~~~~~~~~~~l~~A~~~g~~~~  316 (838)
                        +.+++++|++ |++++.++..|.|||++|+..+.       ..+++++|+++|...+     +. .++.|+..+..++
T Consensus       220 ~~~~~iv~lLl~-gadin~~d~~G~TpLh~A~~~~~-------~~~~~~~Ll~~g~~~~-----~~-~~~~a~~~~~~~~  285 (446)
T PHA02946        220 VKNVDIINLLLP-STDVNKQNKFGDSPLTLLIKTLS-------PAHLINKLLSTSNVIT-----DQ-TVNICIFYDRDDV  285 (446)
T ss_pred             CCcHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHhCC-------hHHHHHHHHhCCCCCC-----Cc-HHHHHHHcCchHH
Confidence              8999999995 89999999999999999999862       3579999999987544     23 4889999999999


Q ss_pred             HHHHHhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCcccc
Q psy3308         317 VELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRILLRNGASVDAR  396 (838)
Q Consensus       317 v~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~l~~A~~~g~~~iv~~Ll~~g~~~~~~  396 (838)
                      ++++.++|.      ..|.||||+|+.+|+.++|++|++++.       .+.|||++|+..++.+++++|+.+|++++..
T Consensus       286 ~e~l~~~g~------~~~~TpLh~Aa~~g~~eivk~Ll~~~~-------~~~t~L~~A~~~~~~~~v~~Ll~~ga~~n~~  352 (446)
T PHA02946        286 LEIINDKGK------QYDSTDFKMAVEVGSIRCVKYLLDNDI-------ICEDAMYYAVLSEYETMVDYLLFNHFSVDSV  352 (446)
T ss_pred             HHHHHHcCc------ccCCCHHHHHHHcCCHHHHHHHHHCCC-------ccccHHHHHHHhCHHHHHHHHHHCCCCCCCc
Confidence            999998764      347799999999999999999999864       4579999999999999999999999999874


Q ss_pred             ccCCCCHHHHHHhhCcccchhhhhhcccCCCCHHHHHHHcCCHHHHHHHHHCC
Q psy3308         397 AREDQTPLHVASRLRRFSSASQSALTRVRGETPLHLAARANQTDIVRILLRNG  449 (838)
Q Consensus       397 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~iv~~Ll~~~  449 (838)
                       .                          .|.|++++|++.++.++++.|+.+.
T Consensus       353 -~--------------------------~G~t~l~~a~~~~~~~~~~~ll~~~  378 (446)
T PHA02946        353 -V--------------------------NGHTCMSECVRLNNPVILSKLMLHN  378 (446)
T ss_pred             -c--------------------------ccccHHHHHHHcCCHHHHHHHHhcC
Confidence             2                          3678889999999999999999864


No 8  
>PHA02730 ankyrin-like protein; Provisional
Probab=100.00  E-value=1.4e-46  Score=393.71  Aligned_cols=416  Identities=16%  Similarity=0.178  Sum_probs=280.0

Q ss_pred             HHHHHHHhCCCCcc-ccCCCCCcHHHHHHHcC---CHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcC--cHHHHHHHHH
Q psy3308         315 KVVELLLKYGASIA-ATTESGLTPLHVASFMG---CMNIAIFLLQAGAAPDTATVRGETPLHLAARAN--QTDIVRILLR  388 (838)
Q Consensus       315 ~~v~~L~~~~~~~~-~~~~~~~~~l~~A~~~g---~~~iv~~Ll~~~~~~~~~~~~~~~~l~~A~~~g--~~~iv~~Ll~  388 (838)
                      ..+++.++..++++ .++..|.||||+|+.+|   +.++|++|+++|++++..+..|.|||++|+..+  +.|++++|++
T Consensus        21 ~~~~~~~~~~~~in~~kd~~G~TaLh~A~~~~~~~~~eivklLLs~GAdin~kD~~G~TPLh~Aa~~~~~~~eIv~~Ll~  100 (672)
T PHA02730         21 KKIKLEIETCHNLSKHIDRRGNNALHCYVSNKCDTDIKIVRLLLSRGVERLCRNNEGLTPLGVYSKRKYVKSQIVHLLIS  100 (672)
T ss_pred             HHHHHHHHHhcchhhhcCCCCCcHHHHHHHcCCcCcHHHHHHHHhCCCCCcccCCCCCChHHHHHHcCCCcHHHHHHHHh
Confidence            44555566555555 55566777777777665   367777777777777777777777777776655  5777777777


Q ss_pred             CCCCc--cccccCCCCHHHHHHhhCcccchhhhhhcccCCCCHHHHHHH--cCCHHHHHHHHH-CCCCCCCCCC-----C
Q psy3308         389 NGASV--DARAREDQTPLHVASRLRRFSSASQSALTRVRGETPLHLAAR--ANQTDIVRILLR-NGASVDARAR-----E  458 (838)
Q Consensus       389 ~g~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~--~~~~~iv~~Ll~-~~~~~~~~~~-----~  458 (838)
                      .|++.  +..+..+.                          ++++.++.  +++.+++++|++ .+.+++....     .
T Consensus       101 ~~~~~~~~~~~~~~d--------------------------~~l~~y~~s~n~~~~~vk~Li~~~~~~~~~~~~~~~~~~  154 (672)
T PHA02730        101 SYSNASNELTSNIND--------------------------FDLYSYMSSDNIDLRLLKYLIVDKRIRPSKNTNYYIHCL  154 (672)
T ss_pred             cCCCCCcccccccCC--------------------------chHHHHHHhcCCcHHHHHHHHHhcCCChhhhhhhhcccc
Confidence            65433  33333222                          23333333  666666666664 4455544322     4


Q ss_pred             CCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCChHHHHHHHhCcHHHHHHHHHCCCCCcccCCCC-CcHHHHH-----
Q psy3308         459 DQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKG-FTPLHLA-----  532 (838)
Q Consensus       459 ~~~~l~~a~~~~~~~~v~~L~~~~~~~~~~~~~~~~~l~~A~~~~~~e~v~~L~~~~~~~~~~~~~~-~~~l~~A-----  532 (838)
                      +.+|++.+...++.++|++|+++|++++...-.+                          ...+... .+.|++.     
T Consensus       155 ~~~~~yl~~~~~~~eIvklLi~~g~~v~g~~~~~--------------------------~~~~~~~c~~~l~~~il~~~  208 (672)
T PHA02730        155 GLVDIYVTTPNPRPEVLLWLLKSECYSTGYVFRS--------------------------CMYDSDRCKNSLHYYILSHR  208 (672)
T ss_pred             chhhhhHhcCCCchHHHHHHHHcCCccccccccc--------------------------ccccCCccchhHHHHHHhhh
Confidence            5666666666666666666666666653111000                          0011112 2333322     


Q ss_pred             -HHcCCHHHHHHHHhCCCCCCCchhHHHHHhhcCCCccccCCCCCcHHHH--HHHcCcHHHHHHHHhCCCCCCCCCCC--
Q psy3308         533 -AKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHL--AAKYGRMKIAQMLLQKDAPVDSQGKN--  607 (838)
Q Consensus       533 -~~~g~~~~~~~Ll~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~--a~~~~~~~~v~~Ll~~~~~~~~~~~~--  607 (838)
                       ...++.+++++|+++                 |++++.++..|.||||.  +...++.++|++|++...+....+..  
T Consensus       209 ~~~~n~~eiv~lLIs~-----------------GadIN~kd~~G~TpLh~~~~~~~~~~eiv~~Li~~~~~~~~~~~~~~  271 (672)
T PHA02730        209 ESESLSKDVIKCLIDN-----------------NVSIHGRDEGGSLPIQYYWSCSTIDIEIVKLLIKDVDTCSVYDDISQ  271 (672)
T ss_pred             hhhccCHHHHHHHHHC-----------------CCCCCCCCCCCCCHHHHHHHcCcccHHHHHHHHhccccccccccccc
Confidence             244566777777655                 55677888999999985  44556799999999832221111110  


Q ss_pred             --CCcHHHHHH----Hc----CCHHHHHHHHhCCCCC-------CccCCCCCh---------------------HHHHHH
Q psy3308         608 --GVTPLHVAS----HY----DHQNVALLLLDRGASP-------HAVAKNGYT---------------------PLHIAA  649 (838)
Q Consensus       608 --~~~~l~~A~----~~----~~~~~v~~Ll~~g~~~-------~~~~~~~~t---------------------~L~~A~  649 (838)
                        -+..|.--.    +.    =+.++|+.|++.+...       ...+..|.+                     .|+.-.
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~i~~~~~~~~~~~~q~~l~~Y~  351 (672)
T PHA02730        272 PYIRGVLADYLNKRFRVTPYNVDMEIVNLLIEGRHTLIDVMRSITSYDSREYNHYIIDNILKRFRQQDESIVQAMLINYL  351 (672)
T ss_pred             hhhhhhHHHhhhhhhhcccCCcchHHHHHHhhccCcchhhhhccccccccccchhHHHHHHHhhhccchhHHHHHHHHHH
Confidence              001111000    00    1246788888765431       112334432                     566666


Q ss_pred             HcC---cHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCc----HHHHHHHHhCCC--CCCCCCCCCCcHhHH---HHhc
Q psy3308         650 KKN---QMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGH----TDMSSLLIEHGA--TVSHQAKNGLTPLHL---CAQE  717 (838)
Q Consensus       650 ~~~---~~~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~----~~iv~~Ll~~g~--~~~~~~~~~~t~l~~---A~~~  717 (838)
                      +.+   +.+++++|+++|++++.. ..|.||||+|+..++    .+++++|+++|+  +++..+..|.||||.   |...
T Consensus       352 ~~~~~v~ieIvelLIs~GAdIN~k-~~G~TpLH~Aa~~nnn~i~~eIvelLIs~Ga~~dIN~kd~~G~T~Lh~~i~a~~~  430 (672)
T PHA02730        352 HYGDMVSIPILRCMLDNGATMDKT-TDNNYPLHDYFVNNNNIVDVNVVRFIVENNGHMAINHVSNNGRLCMYGLILSRFN  430 (672)
T ss_pred             hcCCcCcHHHHHHHHHCCCCCCcC-CCCCcHHHHHHHHcCCcchHHHHHHHHHcCCCccccccccCCCchHhHHHHHHhc
Confidence            655   589999999999999986 789999999998875    899999999998  689999999999984   3333


Q ss_pred             C---------CHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCC-CCCcHHHHHHHh--Cc
Q psy3308         718 D---------KVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTN-LGYTPLHQASQQ--GR  785 (838)
Q Consensus       718 g---------~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~-~g~t~l~~A~~~--~~  785 (838)
                      +         ..+++++|+++|+++|.+|..|+||||+|+..++.+++++|+++|+++|..|. .|.|||++|+..  ++
T Consensus       431 n~~~~~~e~~~~~ivk~LIs~GADINakD~~G~TPLh~Aa~~~~~eive~LI~~GAdIN~~d~~~g~TaL~~Aa~~~~~~  510 (672)
T PHA02730        431 NCGYHCYETILIDVFDILSKYMDDIDMIDNENKTLLYYAVDVNNIQFARRLLEYGASVNTTSRSIINTAIQKSSYRRENK  510 (672)
T ss_pred             cccccccchhHHHHHHHHHhcccchhccCCCCCCHHHHHHHhCCHHHHHHHHHCCCCCCCCCCcCCcCHHHHHHHhhcCc
Confidence            2         23579999999999999999999999999999999999999999999999997 599999999974  79


Q ss_pred             HHHHHHHHhCCCCCC
Q psy3308         786 VLIIDLLLGAGAQPN  800 (838)
Q Consensus       786 ~~~v~~Ll~~ga~~~  800 (838)
                      .+++++|+++|++.+
T Consensus       511 ~eIv~~LLs~ga~i~  525 (672)
T PHA02730        511 TKLVDLLLSYHPTLE  525 (672)
T ss_pred             HHHHHHHHHcCCCHH
Confidence            999999999999764


No 9  
>PHA02946 ankyin-like protein; Provisional
Probab=100.00  E-value=7.2e-46  Score=388.68  Aligned_cols=333  Identities=20%  Similarity=0.243  Sum_probs=169.1

Q ss_pred             CcHHHHHHH--cCcHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcHHHHHHHcCC
Q psy3308          96 FTPLYMAAQ--ENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGH  173 (838)
Q Consensus        96 ~t~l~~A~~--~g~~~~v~~L~~~~~~~~~~~~~~~~~l~~Aa~~g~~~iv~~L~~~~~~~~~~~~~~~tal~~A~~~g~  173 (838)
                      .++||.++.  .++.++|++|+++|++++.++..|.||||+||+.|+.++|++|+++|++++.+|..|+||||+|+..++
T Consensus        38 ~~~Lh~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~G~TpLh~Aa~~g~~eiv~lLL~~GAdin~~d~~g~TpLh~A~~~~~  117 (446)
T PHA02946         38 YHILHAYCGIKGLDERFVEELLHRGYSPNETDDDGNYPLHIASKINNNRIVAMLLTHGADPNACDKQHKTPLYYLSGTDD  117 (446)
T ss_pred             ChHHHHHHHhcCCCHHHHHHHHHCcCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCC
Confidence            344554432  223455555555555555555555555555555555555555555555555555555555555544432


Q ss_pred             --HHHHHHHHHcCCCccCCCCCCccHHHHHHhCCcHHHHHHHHhCCCCCCcccCCCccHHHHHHhcCCHHHHHHHHHCCC
Q psy3308         174 --DNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKA  251 (838)
Q Consensus       174 --~~iv~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~iv~~L~~~~~  251 (838)
                        .+++++|+++|++++.                                ..+..+.|||+ |+..|+.+++++|++.|+
T Consensus       118 ~~~e~v~lLl~~Gadin~--------------------------------~~d~~g~tpL~-aa~~~~~~vv~~Ll~~ga  164 (446)
T PHA02946        118 EVIERINLLVQYGAKINN--------------------------------SVDEEGCGPLL-ACTDPSERVFKKIMSIGF  164 (446)
T ss_pred             chHHHHHHHHHcCCCccc--------------------------------ccCCCCCcHHH-HHHCCChHHHHHHHhccc
Confidence              4455555555554442                                12334444443 334444555555555555


Q ss_pred             CccccccCCCchHHHHHhhCCccccccChHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcC--CHHHHHHHHhCCCCccc
Q psy3308         252 DPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKN--RYKVVELLLKYGASIAA  329 (838)
Q Consensus       252 ~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~i~~~Ll~~~~~~~~~~~~~~~~l~~A~~~g--~~~~v~~L~~~~~~~~~  329 (838)
                      +++..+..|.||||.|+..+.      .+.+++++|++.|++++.++..|.||||+|+..|  +.+++++|++ |++++.
T Consensus       165 d~~~~d~~G~t~Lh~A~~~~~------~~~~~v~~Ll~~Gadin~~d~~G~TpLH~Aa~~~~~~~~iv~lLl~-gadin~  237 (446)
T PHA02946        165 EARIVDKFGKNHIHRHLMSDN------PKASTISWMMKLGISPSKPDHDGNTPLHIVCSKTVKNVDIINLLLP-STDVNK  237 (446)
T ss_pred             cccccCCCCCCHHHHHHHhcC------CCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCCcHHHHHHHHc-CCCCCC
Confidence            555555555555554444321      1344555555555555555555555555555543  4555555553 555555


Q ss_pred             cCCCCCcHHHHHHHcCC-HHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCccccccCCCCHHHHHH
Q psy3308         330 TTESGLTPLHVASFMGC-MNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVAS  408 (838)
Q Consensus       330 ~~~~~~~~l~~A~~~g~-~~iv~~Ll~~~~~~~~~~~~~~~~l~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~~~  408 (838)
                      .+..|.||||+|+..++ .+++++|+++|...+.     . .++.|+..+..++++++.++|.+                
T Consensus       238 ~d~~G~TpLh~A~~~~~~~~~~~~Ll~~g~~~~~-----~-~~~~a~~~~~~~~~e~l~~~g~~----------------  295 (446)
T PHA02946        238 QNKFGDSPLTLLIKTLSPAHLINKLLSTSNVITD-----Q-TVNICIFYDRDDVLEIINDKGKQ----------------  295 (446)
T ss_pred             CCCCCCCHHHHHHHhCChHHHHHHHHhCCCCCCC-----c-HHHHHHHcCchHHHHHHHHcCcc----------------
Confidence            55555555555555554 3455555555433221     1 24555555555555555554321                


Q ss_pred             hhCcccchhhhhhcccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCC
Q psy3308         409 RLRRFSSASQSALTRVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAP  488 (838)
Q Consensus       409 ~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~iv~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~L~~~~~~~~~~  488 (838)
                                      .+.||||+|+..|+.+++++|+++|.       .+.|||++|+..++.+++++|+.+|++++..
T Consensus       296 ----------------~~~TpLh~Aa~~g~~eivk~Ll~~~~-------~~~t~L~~A~~~~~~~~v~~Ll~~ga~~n~~  352 (446)
T PHA02946        296 ----------------YDSTDFKMAVEVGSIRCVKYLLDNDI-------ICEDAMYYAVLSEYETMVDYLLFNHFSVDSV  352 (446)
T ss_pred             ----------------cCCCHHHHHHHcCCHHHHHHHHHCCC-------ccccHHHHHHHhCHHHHHHHHHHCCCCCCCc
Confidence                            12355555555555555555555432       2345555555555555555555555555553


Q ss_pred             CCCCChHHHHHHHhCcHHHHHHHHHC
Q psy3308         489 TKDGYTALHISAKEGQDEVASILTES  514 (838)
Q Consensus       489 ~~~~~~~l~~A~~~~~~e~v~~L~~~  514 (838)
                       ..|.||+++|+..++.++++.|+..
T Consensus       353 -~~G~t~l~~a~~~~~~~~~~~ll~~  377 (446)
T PHA02946        353 -VNGHTCMSECVRLNNPVILSKLMLH  377 (446)
T ss_pred             -cccccHHHHHHHcCCHHHHHHHHhc
Confidence             3455556555555555555555553


No 10 
>PHA02730 ankyrin-like protein; Provisional
Probab=100.00  E-value=5.5e-45  Score=381.83  Aligned_cols=425  Identities=20%  Similarity=0.178  Sum_probs=329.3

Q ss_pred             HHHHHHHHHCCCCcc-cCCCCCCcHHHHHHHcC---cHHHHHHHHHCCCCCCccccCCCcHHHHHHHcC--CHHHHHHHH
Q psy3308          75 EEVAKILVDNGATIN-VQSLNGFTPLYMAAQEN---HDGVVRYLLSKGGNQTLATEHNITPLHVACKWG--KVAMVELLI  148 (838)
Q Consensus        75 ~~~v~~l~~~~~~~~-~~~~~~~t~l~~A~~~g---~~~~v~~L~~~~~~~~~~~~~~~~~l~~Aa~~g--~~~iv~~L~  148 (838)
                      ...+|+.++..+++| .+|..|+||||+|+..|   +.++|++|+++|++++.+|..|.||||+|+..|  +.|||++|+
T Consensus        20 ~~~~~~~~~~~~~in~~kd~~G~TaLh~A~~~~~~~~~eivklLLs~GAdin~kD~~G~TPLh~Aa~~~~~~~eIv~~Ll   99 (672)
T PHA02730         20 YKKIKLEIETCHNLSKHIDRRGNNALHCYVSNKCDTDIKIVRLLLSRGVERLCRNNEGLTPLGVYSKRKYVKSQIVHLLI   99 (672)
T ss_pred             HHHHHHHHHHhcchhhhcCCCCCcHHHHHHHcCCcCcHHHHHHHHhCCCCCcccCCCCCChHHHHHHcCCCcHHHHHHHH
Confidence            456788888877888 78889999999999997   599999999999999999999999999999977  799999999


Q ss_pred             HcCCC--CccccCCCCcHHHHHHH--cCCHHHHHHHHH-cCCCccCCC-----CCCccHHHHHHhCCcHHHHHHHHhCCC
Q psy3308         149 SKGAN--IEAKTRDGLTPLHCAAR--SGHDNVIDILIE-KGAALYSKT-----KNGLAPLHMASQGDHEAATRVLIYHGA  218 (838)
Q Consensus       149 ~~~~~--~~~~~~~~~tal~~A~~--~g~~~iv~~L~~-~~~~~~~~~-----~~~~~~l~~A~~~g~~~~v~~L~~~~~  218 (838)
                      +.|++  ++..+..+.+||+.++.  +++.++|++|++ .+.+++...     ..|.+|+.+|+..++.++|++|+++|+
T Consensus       100 ~~~~~~~~~~~~~~~d~~l~~y~~s~n~~~~~vk~Li~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~eIvklLi~~g~  179 (672)
T PHA02730        100 SSYSNASNELTSNINDFDLYSYMSSDNIDLRLLKYLIVDKRIRPSKNTNYYIHCLGLVDIYVTTPNPRPEVLLWLLKSEC  179 (672)
T ss_pred             hcCCCCCcccccccCCchHHHHHHhcCCcHHHHHHHHHhcCCChhhhhhhhccccchhhhhHhcCCCchHHHHHHHHcCC
Confidence            99654  46677778999999888  999999999996 566655442     278999999999999999999999999


Q ss_pred             CCCc-------ccCCC-ccHHHHH------HhcCCHHHHHHHHHCCCCccccccCCCchHHHHHhhCCccccccChHHHH
Q psy3308         219 GVDE-------ITVDY-LTALHVA------SHCGHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVA  284 (838)
Q Consensus       219 ~~~~-------~~~~~-~~~l~~A------~~~g~~~iv~~L~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~i~  284 (838)
                      +++.       .+... .+.|+++      ..+++.|++++|+++|+++|.++..|.||||++..+.      .++.|++
T Consensus       180 ~v~g~~~~~~~~~~~~c~~~l~~~il~~~~~~~n~~eiv~lLIs~GadIN~kd~~G~TpLh~~~~~~------~~~~eiv  253 (672)
T PHA02730        180 YSTGYVFRSCMYDSDRCKNSLHYYILSHRESESLSKDVIKCLIDNNVSIHGRDEGGSLPIQYYWSCS------TIDIEIV  253 (672)
T ss_pred             cccccccccccccCCccchhHHHHHHhhhhhhccCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcC------cccHHHH
Confidence            8851       22223 3444422      5678999999999999999999999999999633321      1368999


Q ss_pred             HHHHhCCCCCCCCC-CCC---CcHHHHHH----H----cCCHHHHHHHHhCCCCc-------cccCCCCCc---------
Q psy3308         285 KTLLDRKADPNARA-LNG---FTPLHIAC----K----KNRYKVVELLLKYGASI-------AATTESGLT---------  336 (838)
Q Consensus       285 ~~Ll~~~~~~~~~~-~~~---~~~l~~A~----~----~g~~~~v~~L~~~~~~~-------~~~~~~~~~---------  336 (838)
                      ++|++...+...-+ ..+   +..|+--.    +    .=+.++|+.|++.+...       ...+..|.+         
T Consensus       254 ~~Li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~i~~  333 (672)
T PHA02730        254 KLLIKDVDTCSVYDDISQPYIRGVLADYLNKRFRVTPYNVDMEIVNLLIEGRHTLIDVMRSITSYDSREYNHYIIDNILK  333 (672)
T ss_pred             HHHHhccccccccccccchhhhhhHHHhhhhhhhcccCCcchHHHHHHhhccCcchhhhhccccccccccchhHHHHHHH
Confidence            99998444332211 111   11121111    1    11457888888854331       112333332         


Q ss_pred             ------------HHHHHHHcC---CHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCc----HHHHHHHHHCCC--Cccc
Q psy3308         337 ------------PLHVASFMG---CMNIAIFLLQAGAAPDTATVRGETPLHLAARANQ----TDIVRILLRNGA--SVDA  395 (838)
Q Consensus       337 ------------~l~~A~~~g---~~~iv~~Ll~~~~~~~~~~~~~~~~l~~A~~~g~----~~iv~~Ll~~g~--~~~~  395 (838)
                                  .|+.-.+.+   +.+++++|+++|++++.. ..|.||||+|+..++    .+++++|+++|+  +++.
T Consensus       334 ~~~~~~~~~~q~~l~~Y~~~~~~v~ieIvelLIs~GAdIN~k-~~G~TpLH~Aa~~nnn~i~~eIvelLIs~Ga~~dIN~  412 (672)
T PHA02730        334 RFRQQDESIVQAMLINYLHYGDMVSIPILRCMLDNGATMDKT-TDNNYPLHDYFVNNNNIVDVNVVRFIVENNGHMAINH  412 (672)
T ss_pred             hhhccchhHHHHHHHHHHhcCCcCcHHHHHHHHHCCCCCCcC-CCCCcHHHHHHHHcCCcchHHHHHHHHHcCCCccccc
Confidence                        455555655   699999999999999985 789999999988875    899999999997  6888


Q ss_pred             cccCCCCHHHHHHhhCcccchhhhhhcccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHH
Q psy3308         396 RAREDQTPLHVASRLRRFSSASQSALTRVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIA  475 (838)
Q Consensus       396 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~iv~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~v  475 (838)
                      .+..|+|||+..........          +.    .+......+++++|+++|++++.++..|.|||++|+..++.+++
T Consensus       413 kd~~G~T~Lh~~i~a~~~n~----------~~----~~~e~~~~~ivk~LIs~GADINakD~~G~TPLh~Aa~~~~~eiv  478 (672)
T PHA02730        413 VSNNGRLCMYGLILSRFNNC----------GY----HCYETILIDVFDILSKYMDDIDMIDNENKTLLYYAVDVNNIQFA  478 (672)
T ss_pred             cccCCCchHhHHHHHHhccc----------cc----cccchhHHHHHHHHHhcccchhccCCCCCCHHHHHHHhCCHHHH
Confidence            89999999984211100000          00    00011245789999999999999999999999999999999999


Q ss_pred             HHHHhCCCCCCCCCC-CCChHHHHHHHh--CcHHHHHHHHHCCCCCcc
Q psy3308         476 SLLLQHGASVDAPTK-DGYTALHISAKE--GQDEVASILTESGASITA  520 (838)
Q Consensus       476 ~~L~~~~~~~~~~~~-~~~~~l~~A~~~--~~~e~v~~L~~~~~~~~~  520 (838)
                      ++|+++|++++..+. .|.||++.|+..  ++.+++++|+++|+++..
T Consensus       479 e~LI~~GAdIN~~d~~~g~TaL~~Aa~~~~~~~eIv~~LLs~ga~i~~  526 (672)
T PHA02730        479 RRLLEYGASVNTTSRSIINTAIQKSSYRRENKTKLVDLLLSYHPTLET  526 (672)
T ss_pred             HHHHHCCCCCCCCCCcCCcCHHHHHHHhhcCcHHHHHHHHHcCCCHHH
Confidence            999999999999997 599999999874  789999999999988763


No 11 
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=100.00  E-value=3.4e-45  Score=391.88  Aligned_cols=349  Identities=19%  Similarity=0.204  Sum_probs=293.8

Q ss_pred             HcCCHHHHHHHHHCC-CCCCCC-CCCCCcHHHHHHH--cCCHHHHHHHHhCCCCCCCCCCCCChHHHHHHHhCc--HHHH
Q psy3308         435 RANQTDIVRILLRNG-ASVDAR-AREDQTPLHVASR--LGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQ--DEVA  508 (838)
Q Consensus       435 ~~~~~~iv~~Ll~~~-~~~~~~-~~~~~~~l~~a~~--~~~~~~v~~L~~~~~~~~~~~~~~~~~l~~A~~~~~--~e~v  508 (838)
                      +.++.+++++|++.| ++++.. +..|.||||.|+.  .++.+++++|+++|++++..+..|.||||.|+..|+  .+++
T Consensus       151 ~~v~leiVk~LLe~G~ADIN~~~d~~G~TpLH~A~~n~~~~~eIVklLLe~GADVN~kD~~G~TPLH~Aa~~g~~~~eIV  230 (764)
T PHA02716        151 RGIDLDLIKYMVDVGIVNLNYVCKKTGYGILHAYLGNMYVDIDILEWLCNNGVNVNLQNNHLITPLHTYLITGNVCASVI  230 (764)
T ss_pred             cCCCHHHHHHHHHCCCCCcccccCCCCCcHHHHHHHhccCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCHHHH
Confidence            468999999999999 999988 8899999998864  467899999999999999999999999999999995  5999


Q ss_pred             HHHHHCCCCCcccCCCCCcHHHHHH---HcCCHHHHHHHHhCCCCCCCchhHHHHHhhcCCCccccCCCCCcH---HHHH
Q psy3308         509 SILTESGASITATTKKGFTPLHLAA---KYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTP---LHLA  582 (838)
Q Consensus       509 ~~L~~~~~~~~~~~~~~~~~l~~A~---~~g~~~~~~~Ll~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~---l~~a  582 (838)
                      ++|++.|++++.++..|.|||+.|+   ..++.++++.|++.......                   .....+   +..|
T Consensus       231 klLLe~GADVN~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~-------------------~~~~~~L~~~i~A  291 (764)
T PHA02716        231 KKIIELGGDMDMKCVNGMSPIMTYIINIDNINPEITNIYIESLDGNKV-------------------KNIPMILHSYITL  291 (764)
T ss_pred             HHHHHcCCCCCCCCCCCCCHHHHHHHhhhccCHHHHHHHHHhcccccc-------------------ccchhhhHHHHHH
Confidence            9999999999999999999999875   56789999999875321100                   011122   3457


Q ss_pred             HHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHH--cCCHHHHHHHHhCCCCCCccCCCCChHHHHHHH----------
Q psy3308         583 AKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASH--YDHQNVALLLLDRGASPHAVAKNGYTPLHIAAK----------  650 (838)
Q Consensus       583 ~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~A~~--~~~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~----------  650 (838)
                      +..|+.+++++|+++|++++.+|..|.||||+|+.  .++.+++++|+++|++++..+..|+||||.|+.          
T Consensus       292 A~~g~leiVklLLe~GAdIN~kD~~G~TPLH~Aaa~~~~~~eIVklLLe~GADIN~kD~~G~TPLH~A~~~lav~~~ld~  371 (764)
T PHA02716        292 ARNIDISVVYSFLQPGVKLHYKDSAGRTCLHQYILRHNISTDIIKLLHEYGNDLNEPDNIGNTVLHTYLSMLSVVNILDP  371 (764)
T ss_pred             HHcCCHHHHHHHHhCCCceeccCCCCCCHHHHHHHHhCCCchHHHHHHHcCCCCccCCCCCCCHHHHHHHhhhhhccccc
Confidence            89999999999999999999999999999999865  467899999999999999999999999999875          


Q ss_pred             ----cCcHHHHHHHHhCCCCCCCCCCCCCcHHHH----HHHcCcHHHHHHHHhCCCCCCCCC--------CCCCc--HhH
Q psy3308         651 ----KNQMDIATTLLEYNAKPNAESKAGFTPLHL----SAQEGHTDMSSLLIEHGATVSHQA--------KNGLT--PLH  712 (838)
Q Consensus       651 ----~~~~~iv~~Ll~~~~~~~~~~~~g~t~L~~----A~~~g~~~iv~~Ll~~g~~~~~~~--------~~~~t--~l~  712 (838)
                          .++.+++++|+++|++++.++..|+||||.    |...++.+++++|++.|+......        ..+.+  .+|
T Consensus       372 ~~~~~~~~eVVklLL~~GADIn~kn~~G~TPLh~y~~~a~n~~~~dIvklLis~~~~~~~~~~~~q~ll~~~d~~~~~lh  451 (764)
T PHA02716        372 ETDNDIRLDVIQCLISLGADITAVNCLGYTPLTSYICTAQNYMYYDIIDCLISDKVLNMVKHRILQDLLIRVDDTPCIIH  451 (764)
T ss_pred             cccccChHHHHHHHHHCCCCCCCcCCCCCChHHHHHHHHHhcChHHHHHHHHhCcchhhhhhhhhhhhhhccCcchhhHH
Confidence                368999999999999999999999999994    334578999999999886533221        12222  356


Q ss_pred             HHHhcCCHH------------------HHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCH-----HHHHHHHHCCCCCccC
Q psy3308         713 LCAQEDKVN------------------VATITMFNGAEIDPVTKAGFTPLHIASHFGQL-----NMVRYLVENGANVNAT  769 (838)
Q Consensus       713 ~A~~~g~~~------------------i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~-----~~v~~Ll~~g~~~~~~  769 (838)
                      .++..+..+                  ++..++.++.+++..|..|+||||+|+..|+.     +++++|++.|+++|.+
T Consensus       452 h~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~ii~~~nvN~~D~~G~TPLh~Aa~~g~~~~v~~e~~k~LL~~GADIN~~  531 (764)
T PHA02716        452 HIIAKYNIPTDLYTDEYEPYDSTKIHDVYHCAIIERYNNAVCETSGMTPLHVSIISHTNANIVMDSFVYLLSIQYNINIP  531 (764)
T ss_pred             HHHHhcCcchhhhhhhhhhccccccchhhHHHHHhhccccccCCCCCCHHHHHHHcCCccchhHHHHHHHHhCCCCCccc
Confidence            666554433                  33344456677888999999999999999886     4559999999999999


Q ss_pred             CCCCCcHHHHHHHhCcH-----HHHHHHHhCCCCCCCC
Q psy3308         770 TNLGYTPLHQASQQGRV-----LIIDLLLGAGAQPNAT  802 (838)
Q Consensus       770 ~~~g~t~l~~A~~~~~~-----~~v~~Ll~~ga~~~~~  802 (838)
                      |..|+||||+|+++|+.     ++|++|+++|++++..
T Consensus       532 d~~G~TPLh~A~~~g~~~~~~~eIvk~LL~~ga~~~~~  569 (764)
T PHA02716        532 TKNGVTPLMLTMRNNRLSGHQWYIVKNILDKRPNVDIV  569 (764)
T ss_pred             CCCCCCHHHHHHHcCCccccHHHHHHHHHhcCCCcchH
Confidence            99999999999999976     9999999999998876


No 12 
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=100.00  E-value=4.7e-44  Score=383.15  Aligned_cols=391  Identities=20%  Similarity=0.208  Sum_probs=269.3

Q ss_pred             HcCcHHHHHHHHHCC-CCCCcc-ccCCCcHHHHHHHc--CCHHHHHHHHHcCCCCccccCCCCcHHHHHHHcCC--HHHH
Q psy3308         104 QENHDGVVRYLLSKG-GNQTLA-TEHNITPLHVACKW--GKVAMVELLISKGANIEAKTRDGLTPLHCAARSGH--DNVI  177 (838)
Q Consensus       104 ~~g~~~~v~~L~~~~-~~~~~~-~~~~~~~l~~Aa~~--g~~~iv~~L~~~~~~~~~~~~~~~tal~~A~~~g~--~~iv  177 (838)
                      ..+++++|++|+++| ++++.. +..|.||||.|+.+  |+.++|++|+++|++++.++..|.||||+|++.|+  .++|
T Consensus       151 ~~v~leiVk~LLe~G~ADIN~~~d~~G~TpLH~A~~n~~~~~eIVklLLe~GADVN~kD~~G~TPLH~Aa~~g~~~~eIV  230 (764)
T PHA02716        151 RGIDLDLIKYMVDVGIVNLNYVCKKTGYGILHAYLGNMYVDIDILEWLCNNGVNVNLQNNHLITPLHTYLITGNVCASVI  230 (764)
T ss_pred             cCCCHHHHHHHHHCCCCCcccccCCCCCcHHHHHHHhccCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCHHHH
Confidence            457778888888888 777777 77788888877543  56788888888888888888888888888888885  4788


Q ss_pred             HHHHHcCCCccCCCCCCccHHHHHH---hCCcHHHHHHHHhCCCCCCcccCCCccHH---HHHHhcCCHHHHHHHHHCCC
Q psy3308         178 DILIEKGAALYSKTKNGLAPLHMAS---QGDHEAATRVLIYHGAGVDEITVDYLTAL---HVASHCGHVRVAKTLLDRKA  251 (838)
Q Consensus       178 ~~L~~~~~~~~~~~~~~~~~l~~A~---~~g~~~~v~~L~~~~~~~~~~~~~~~~~l---~~A~~~g~~~iv~~L~~~~~  251 (838)
                      ++|++.|++++.++..|.|||++|+   .+++.++++.|++.+.... .. ....++   ..|+..|+.+++++|++.|+
T Consensus       231 klLLe~GADVN~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~-~~-~~~~~L~~~i~AA~~g~leiVklLLe~GA  308 (764)
T PHA02716        231 KKIIELGGDMDMKCVNGMSPIMTYIINIDNINPEITNIYIESLDGNK-VK-NIPMILHSYITLARNIDISVVYSFLQPGV  308 (764)
T ss_pred             HHHHHcCCCCCCCCCCCCCHHHHHHHhhhccCHHHHHHHHHhccccc-cc-cchhhhHHHHHHHHcCCHHHHHHHHhCCC
Confidence            8888888888888888888888764   4677888888877532211 11 111222   34677888888888888888


Q ss_pred             CccccccCCCchHHHHHhhCCccccccChHHHHHHHHhCCCCCCCCCCCCCcHHHHHHH--------------cCCHHHH
Q psy3308         252 DPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACK--------------KNRYKVV  317 (838)
Q Consensus       252 ~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~i~~~Ll~~~~~~~~~~~~~~~~l~~A~~--------------~g~~~~v  317 (838)
                      +++.++..|+||||+|+..+.      ++.+++++|++.|++++.++..|.||||.|+.              .++.+++
T Consensus       309 dIN~kD~~G~TPLH~Aaa~~~------~~~eIVklLLe~GADIN~kD~~G~TPLH~A~~~lav~~~ld~~~~~~~~~eVV  382 (764)
T PHA02716        309 KLHYKDSAGRTCLHQYILRHN------ISTDIIKLLHEYGNDLNEPDNIGNTVLHTYLSMLSVVNILDPETDNDIRLDVI  382 (764)
T ss_pred             ceeccCCCCCCHHHHHHHHhC------CCchHHHHHHHcCCCCccCCCCCCCHHHHHHHhhhhhccccccccccChHHHH
Confidence            888888888888887765321      24568888888888888888888888887764              2567777


Q ss_pred             HHHHhCCCCccccCCCCCcHHHH----HHHcCCHHHHHHHHHcCCCCCCCCC--------C--CCcHHHHHHHcCcHHHH
Q psy3308         318 ELLLKYGASIAATTESGLTPLHV----ASFMGCMNIAIFLLQAGAAPDTATV--------R--GETPLHLAARANQTDIV  383 (838)
Q Consensus       318 ~~L~~~~~~~~~~~~~~~~~l~~----A~~~g~~~iv~~Ll~~~~~~~~~~~--------~--~~~~l~~A~~~g~~~iv  383 (838)
                      ++|+++|++++..+..|.|||+.    |...++.+++++|++.++.......        .  ....++.++..+..++.
T Consensus       383 klLL~~GADIn~kn~~G~TPLh~y~~~a~n~~~~dIvklLis~~~~~~~~~~~~q~ll~~~d~~~~~lhh~~a~~~~~~~  462 (764)
T PHA02716        383 QCLISLGADITAVNCLGYTPLTSYICTAQNYMYYDIIDCLISDKVLNMVKHRILQDLLIRVDDTPCIIHHIIAKYNIPTD  462 (764)
T ss_pred             HHHHHCCCCCCCcCCCCCChHHHHHHHHHhcChHHHHHHHHhCcchhhhhhhhhhhhhhccCcchhhHHHHHHhcCcchh
Confidence            77777777777777777777762    2234567777777765543221110        0  11123333333333332


Q ss_pred             HHHHHCCCCccccccCCCCHHHHHHhhCcccchhhhhhcccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHH
Q psy3308         384 RILLRNGASVDARAREDQTPLHVASRLRRFSSASQSALTRVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPL  463 (838)
Q Consensus       384 ~~Ll~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~iv~~Ll~~~~~~~~~~~~~~~~l  463 (838)
                      .++.+...                                         .......+++.+++..+.+++..+..|.|||
T Consensus       463 ~~~~~~~~-----------------------------------------~~~~~~~~v~~~~ii~~~nvN~~D~~G~TPL  501 (764)
T PHA02716        463 LYTDEYEP-----------------------------------------YDSTKIHDVYHCAIIERYNNAVCETSGMTPL  501 (764)
T ss_pred             hhhhhhhh-----------------------------------------ccccccchhhHHHHHhhccccccCCCCCCHH
Confidence            22221110                                         0001122344454455566777888889999


Q ss_pred             HHHHHcCCH-----HHHHHHHhCCCCCCCCCCCCChHHHHHHHhCcH-----HHHHHHHHCCCCCcccCCCCCcHHHHHH
Q psy3308         464 HVASRLGNG-----DIASLLLQHGASVDAPTKDGYTALHISAKEGQD-----EVASILTESGASITATTKKGFTPLHLAA  533 (838)
Q Consensus       464 ~~a~~~~~~-----~~v~~L~~~~~~~~~~~~~~~~~l~~A~~~~~~-----e~v~~L~~~~~~~~~~~~~~~~~l~~A~  533 (838)
                      |+|+..|+.     +++++|++.|++++.++..|.|||++|+++|+.     ++++.|+++|++++..      .+.+|.
T Consensus       502 h~Aa~~g~~~~v~~e~~k~LL~~GADIN~~d~~G~TPLh~A~~~g~~~~~~~eIvk~LL~~ga~~~~~------~l~~~~  575 (764)
T PHA02716        502 HVSIISHTNANIVMDSFVYLLSIQYNINIPTKNGVTPLMLTMRNNRLSGHQWYIVKNILDKRPNVDIV------IIFLDK  575 (764)
T ss_pred             HHHHHcCCccchhHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCccccHHHHHHHHHhcCCCcchH------HHHHHh
Confidence            998888766     455889999999998899999999999988865     8889999888877654      477888


Q ss_pred             HcCCHHHHHHHHhCCC
Q psy3308         534 KYGRMKIAQMLLQKDA  549 (838)
Q Consensus       534 ~~g~~~~~~~Ll~~~~  549 (838)
                      .+++.+++..|..++.
T Consensus       576 ~~~~~~~~~ll~~~~~  591 (764)
T PHA02716        576 CYANGKFPSLLLSEDD  591 (764)
T ss_pred             hhhhhHHHHHHHHcch
Confidence            8888888888877654


No 13 
>KOG0510|consensus
Probab=100.00  E-value=7.2e-44  Score=361.75  Aligned_cols=350  Identities=26%  Similarity=0.356  Sum_probs=318.8

Q ss_pred             HHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCChHHHHHHHhCcHHHHHHHHHCCCCC
Q psy3308         439 TDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESGASI  518 (838)
Q Consensus       439 ~~iv~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~L~~~~~~~~~~~~~~~~~l~~A~~~~~~e~v~~L~~~~~~~  518 (838)
                      .|..+++++....+...+..|.+++|.++..+..      +..-......|..+.+++|.|+.....+.+++|++.|+++
T Consensus        41 dD~~tli~~kns~~~~~~~~gd~~~~~~~~~~y~------~~~~~~~~a~D~~~n~~l~~a~~~~~~~~i~~Lls~gad~  114 (929)
T KOG0510|consen   41 DDRHTLILEKNSSTPGKRAFGDTELHHASARNYI------LSKLAISYAKDSADNTPLHAAVEYNQGDKIQVLLSYGADT  114 (929)
T ss_pred             HHHHHHHHHhccccchhhhhchhHHHHHHhhcch------hhhhhhhhhhhcccCchhHHHhhcchHHHHHHHHhcCCCC
Confidence            3678888888778888888999999999987765      2333345667888999999999999999999999999999


Q ss_pred             cccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCchhHHHHHhhcCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhCC
Q psy3308         519 TATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKD  598 (838)
Q Consensus       519 ~~~~~~~~~~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ll~~~  598 (838)
                      ..++..+.+|+|+|+..|+++.++.|++++.                 +++..+..+.||||.|+..++.+..+.|++.|
T Consensus       115 ~~~n~~~~aplh~A~~~~~~s~L~~Ll~~~~-----------------dvnl~de~~~TpLh~A~~~~~~E~~k~Li~~~  177 (929)
T KOG0510|consen  115 PLRNLNKNAPLHLAADSGNYSCLKLLLDYGA-----------------DVNLEDENGFTPLHLAARKNKVEAKKELINKG  177 (929)
T ss_pred             ChhhhhccCchhhccccchHHHHHHHHHhcC-----------------CccccccCCCchhhHHHhcChHHHHHHHHhcC
Confidence            9999999999999999999999999998764                 55777889999999999999999889999999


Q ss_pred             CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHh-----CCCCCCccCCCCChHHHHHHHcCcHHHHHHHHhCCCC-------
Q psy3308         599 APVDSQGKNGVTPLHVASHYDHQNVALLLLD-----RGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAK-------  666 (838)
Q Consensus       599 ~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~-----~g~~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~-------  666 (838)
                      +++...+..|.+|+|.|+..|..++.+..+.     .+..+|..+..+.+|||.|++.|++++++.+++.|..       
T Consensus       178 a~~~K~~~~~~~~iH~aa~s~s~e~mEi~l~~~g~~r~~~in~~~n~~~~pLhlAve~g~~e~lk~~L~n~~~~a~~~~~  257 (929)
T KOG0510|consen  178 ADPCKSDIDGNFPIHEAARSGSKECMEIFLPEHGYERQTHINFDNNEKATPLHLAVEGGDIEMLKMCLQNGKKIADVQLD  257 (929)
T ss_pred             CCCCcccCcCCchHHHHHHhcchhhhhhhhccccchhhcccccccCCCCcchhhhhhcCCHHHHHHHHhCccccchhhhH
Confidence            9999999999999999999999999999988     6788899999999999999999999999999997643       


Q ss_pred             --------CCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHh-CCC-CCCCC
Q psy3308         667 --------PNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMF-NGA-EIDPV  736 (838)
Q Consensus       667 --------~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~-~~~-~~~~~  736 (838)
                              ++..|.+|.||||+|++.|+.++|+.|+..|++++.+++++.||||.||..|+.++|+-|++ .+. ..|..
T Consensus       258 ~~~q~kelv~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~I~~kn~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~  337 (929)
T KOG0510|consen  258 AMQQEKELVNDEDNDGCTPLHYAARQGGPESVDNLLGFGASINSKNKDEESPLHFAAIYGRINTVERLLQESDTRLLNES  337 (929)
T ss_pred             HHHHHHHHhhcccccCCchHHHHHHcCChhHHHHHHHcCCcccccCCCCCCchHHHHHcccHHHHHHHHhCcCccccccc
Confidence                    34568899999999999999999999999999999999999999999999999999999998 443 45788


Q ss_pred             CCCCCcHHHHHHHcCCHHHHHHHHHCCCCCc---cCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCCCCCCccch-HHH
Q psy3308         737 TKAGFTPLHIASHFGQLNMVRYLVENGANVN---ATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTNLFCC-ATI  811 (838)
Q Consensus       737 ~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~---~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~-~~~  811 (838)
                      |..|.||||.|++.||..+++.|+++|+...   ..|.+|.||||+|+..|+..+|++|+.+||++..+|..|.| +++
T Consensus       338 D~~g~tpLHlaa~~gH~~v~qlLl~~GA~~~~~~e~D~dg~TaLH~Aa~~g~~~av~~Li~~Ga~I~~~n~~g~SA~~~  416 (929)
T KOG0510|consen  338 DLHGMTPLHLAAKSGHDRVVQLLLNKGALFLNMSEADSDGNTALHLAAKYGNTSAVQKLISHGADIGVKNKKGKSAFDT  416 (929)
T ss_pred             cccCCCchhhhhhcCHHHHHHHHHhcChhhhcccccccCCchhhhHHHHhccHHHHHHHHHcCCceeeccccccccccc
Confidence            9999999999999999999999999999877   45999999999999999999999999999999999999999 885


No 14 
>PHA02874 ankyrin repeat protein; Provisional
Probab=100.00  E-value=1e-42  Score=370.66  Aligned_cols=315  Identities=25%  Similarity=0.367  Sum_probs=203.8

Q ss_pred             HHHHHHcCCHHHHHHHHHCC-CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCChHHHHHHHhCcHHHH
Q psy3308         430 LHLAARANQTDIVRILLRNG-ASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVA  508 (838)
Q Consensus       430 l~~A~~~~~~~iv~~Ll~~~-~~~~~~~~~~~~~l~~a~~~~~~~~v~~L~~~~~~~~~~~~~~~~~l~~A~~~~~~e~v  508 (838)
                      +..|+..|+.+.++.|++.+ ..++..+..+.|||+.|+..|+.+++++|+++|++++..+..+.+||+.|+..|+.+++
T Consensus         5 l~~ai~~gd~~~v~~ll~~~~~~~n~~~~~~~tpL~~A~~~g~~~iv~~Ll~~Ga~~n~~~~~~~t~L~~A~~~~~~~iv   84 (434)
T PHA02874          5 LRMCIYSGDIEAIEKIIKNKGNCINISVDETTTPLIDAIRSGDAKIVELFIKHGADINHINTKIPHPLLTAIKIGAHDII   84 (434)
T ss_pred             HHHHHhcCCHHHHHHHHHcCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHH
Confidence            55555666666665555432 23344444555555555555555555555555555555555555555555555555555


Q ss_pred             HHHHHCCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCchhHHHHHhhcCCCccccCCCCCcHHHHHHHcCcH
Q psy3308         509 SILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRM  588 (838)
Q Consensus       509 ~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~  588 (838)
                      ++|++.|+++...                                                            +....+.
T Consensus        85 ~~Ll~~g~~~~~~------------------------------------------------------------~~~~~~~  104 (434)
T PHA02874         85 KLLIDNGVDTSIL------------------------------------------------------------PIPCIEK  104 (434)
T ss_pred             HHHHHCCCCCCcc------------------------------------------------------------hhccCCH
Confidence            5555555443210                                                            1112235


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHcCcHHHHHHHHhCCCCCC
Q psy3308         589 KIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPN  668 (838)
Q Consensus       589 ~~v~~Ll~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~  668 (838)
                      +++++|++.|++++.++..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++
T Consensus       105 ~~i~~ll~~g~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n  184 (434)
T PHA02874        105 DMIKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYAN  184 (434)
T ss_pred             HHHHHHHHCcCCCCCCCCCCccHHHHHHHCCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCC
Confidence            66777777777777777777777777777777777777777777777777777777777777777777777777777777


Q ss_pred             CCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHH
Q psy3308         669 AESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIAS  748 (838)
Q Consensus       669 ~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~  748 (838)
                      ..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||.|+..++ +++++|+ .|++++.+|..|+||||+|+
T Consensus       185 ~~~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~i~~~~~~g~TpL~~A~~~~~-~~i~~Ll-~~~~in~~d~~G~TpLh~A~  262 (434)
T PHA02874        185 VKDNNGESPLHNAAEYGDYACIKLLIDHGNHIMNKCKNGFTPLHNAIIHNR-SAIELLI-NNASINDQDIDGSTPLHHAI  262 (434)
T ss_pred             CCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHCCh-HHHHHHH-cCCCCCCcCCCCCCHHHHHH
Confidence            777777777777777777777777777777777777777777777776654 3445544 46677777777777777777


Q ss_pred             HcC-CHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhC-cHHHHHHHHhCCCCCCCCCCcc
Q psy3308         749 HFG-QLNMVRYLVENGANVNATTNLGYTPLHQASQQG-RVLIIDLLLGAGAQPNATTNLF  806 (838)
Q Consensus       749 ~~g-~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~-~~~~v~~Ll~~ga~~~~~~~~~  806 (838)
                      ..+ +.+++++|+++|++++..|..|.|||++|++.+ +.++++.|+++++..+..+..+
T Consensus       263 ~~~~~~~iv~~Ll~~gad~n~~d~~g~TpL~~A~~~~~~~~~ik~ll~~~~~~~~~~~~~  322 (434)
T PHA02874        263 NPPCDIDIIDILLYHKADISIKDNKGENPIDTAFKYINKDPVIKDIIANAVLIKEADKLK  322 (434)
T ss_pred             hcCCcHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHhCCccHHHHHHHHhcCchhhccccc
Confidence            654 667777777777777777777777777777665 5667777777776665554444


No 15 
>PHA02874 ankyrin repeat protein; Provisional
Probab=100.00  E-value=4.9e-41  Score=357.83  Aligned_cols=310  Identities=24%  Similarity=0.372  Sum_probs=214.4

Q ss_pred             ccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCChHHHHHHHh
Q psy3308         423 RVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKE  502 (838)
Q Consensus       423 ~~~~~~~l~~A~~~~~~~iv~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~L~~~~~~~~~~~~~~~~~l~~A~~~  502 (838)
                      ...+.|||+.|+..|+.+++++|++.|++++..+..+.+||+.|+..|+.+++++|+++|+++...          +...
T Consensus        32 ~~~~~tpL~~A~~~g~~~iv~~Ll~~Ga~~n~~~~~~~t~L~~A~~~~~~~iv~~Ll~~g~~~~~~----------~~~~  101 (434)
T PHA02874         32 VDETTTPLIDAIRSGDAKIVELFIKHGADINHINTKIPHPLLTAIKIGAHDIIKLLIDNGVDTSIL----------PIPC  101 (434)
T ss_pred             CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcc----------hhcc
Confidence            446789999999999999999999999999999999999999999999999999999999876422          2233


Q ss_pred             CcHHHHHHHHHCCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCchhHHHHHhhcCCCccccCCCCCcHHHHH
Q psy3308         503 GQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLA  582 (838)
Q Consensus       503 ~~~e~v~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a  582 (838)
                      ...+++++|++.|++++.++..|.|||++                                                  |
T Consensus       102 ~~~~~i~~ll~~g~d~n~~~~~g~T~Lh~--------------------------------------------------A  131 (434)
T PHA02874        102 IEKDMIKTILDCGIDVNIKDAELKTFLHY--------------------------------------------------A  131 (434)
T ss_pred             CCHHHHHHHHHCcCCCCCCCCCCccHHHH--------------------------------------------------H
Confidence            45677777877777776665555555554                                                  5


Q ss_pred             HHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHcCcHHHHHHHHh
Q psy3308         583 AKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLE  662 (838)
Q Consensus       583 ~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~  662 (838)
                      +..|+.+++++|+++|++++.++..|.||||+|+..++.+++++|+++|++++..+..|.||||.|+..|+.+++++|++
T Consensus       132 ~~~~~~~~v~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~~g~~~iv~~Ll~  211 (434)
T PHA02874        132 IKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGESPLHNAAEYGDYACIKLLID  211 (434)
T ss_pred             HHCCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHh
Confidence            55555555555566666666666666666666666666666666666666666666666666666666666666677666


Q ss_pred             CCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcC-CHHHHHHHHhCCCCCCCCCCCCC
Q psy3308         663 YNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQED-KVNVATITMFNGAEIDPVTKAGF  741 (838)
Q Consensus       663 ~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g-~~~i~~~L~~~~~~~~~~~~~g~  741 (838)
                      +|++++.++..|.||||.|+..++ +++.+|+ .|++++.++..|.||||+|+..+ +.+++++|+++|++++.+|..|+
T Consensus       212 ~g~~i~~~~~~g~TpL~~A~~~~~-~~i~~Ll-~~~~in~~d~~G~TpLh~A~~~~~~~~iv~~Ll~~gad~n~~d~~g~  289 (434)
T PHA02874        212 HGNHIMNKCKNGFTPLHNAIIHNR-SAIELLI-NNASINDQDIDGSTPLHHAINPPCDIDIIDILLYHKADISIKDNKGE  289 (434)
T ss_pred             CCCCCcCCCCCCCCHHHHHHHCCh-HHHHHHH-cCCCCCCcCCCCCCHHHHHHhcCCcHHHHHHHHHCcCCCCCCCCCCC
Confidence            666666666666677776666554 4455554 46666666666777777776654 56677777777777777777777


Q ss_pred             cHHHHHHHcC-CHHHHHHHHHCCCCCccCCCCC-CcHHHHHHHhCcHHHHHHHHh
Q psy3308         742 TPLHIASHFG-QLNMVRYLVENGANVNATTNLG-YTPLHQASQQGRVLIIDLLLG  794 (838)
Q Consensus       742 t~l~~A~~~g-~~~~v~~Ll~~g~~~~~~~~~g-~t~l~~A~~~~~~~~v~~Ll~  794 (838)
                      |||+.|+..+ +.++++.|+.+++.++..+..+ .+++..+....+.+..+++.+
T Consensus       290 TpL~~A~~~~~~~~~ik~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  344 (434)
T PHA02874        290 NPIDTAFKYINKDPVIKDIIANAVLIKEADKLKDSDFLEHIEIKDNKEFSDFIKE  344 (434)
T ss_pred             CHHHHHHHhCCccHHHHHHHHhcCchhhccccchhHHHHHHHHhccchHHHHHHH
Confidence            7777776665 5566677776666554444333 444555555555555444444


No 16 
>KOG0510|consensus
Probab=100.00  E-value=9.8e-42  Score=346.31  Aligned_cols=366  Identities=30%  Similarity=0.390  Sum_probs=299.3

Q ss_pred             HHHHHHHHhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCc
Q psy3308         314 YKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQTDIVRILLRNGASV  393 (838)
Q Consensus       314 ~~~v~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~l~~A~~~g~~~iv~~Ll~~g~~~  393 (838)
                      .|.++++.+........+..|.+++|.|+..+..      ++.-......|..+.+|+++|++....+.|++|++.|+++
T Consensus        41 dD~~tli~~kns~~~~~~~~gd~~~~~~~~~~y~------~~~~~~~~a~D~~~n~~l~~a~~~~~~~~i~~Lls~gad~  114 (929)
T KOG0510|consen   41 DDRHTLILEKNSSTPGKRAFGDTELHHASARNYI------LSKLAISYAKDSADNTPLHAAVEYNQGDKIQVLLSYGADT  114 (929)
T ss_pred             HHHHHHHHHhccccchhhhhchhHHHHHHhhcch------hhhhhhhhhhhcccCchhHHHhhcchHHHHHHHHhcCCCC
Confidence            3678888887777778888999999999987754      3333445567778889999999999999999999999998


Q ss_pred             cccccCCCCHHHHHHhhCcccchhhhhhcccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHH
Q psy3308         394 DARAREDQTPLHVASRLRRFSSASQSALTRVRGETPLHLAARANQTDIVRILLRNGASVDARAREDQTPLHVASRLGNGD  473 (838)
Q Consensus       394 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~iv~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~  473 (838)
                      ...+..                          +.+|+|+|+..++.++++.|+++|++++..+..+.||||.|+..++.|
T Consensus       115 ~~~n~~--------------------------~~aplh~A~~~~~~s~L~~Ll~~~~dvnl~de~~~TpLh~A~~~~~~E  168 (929)
T KOG0510|consen  115 PLRNLN--------------------------KNAPLHLAADSGNYSCLKLLLDYGADVNLEDENGFTPLHLAARKNKVE  168 (929)
T ss_pred             Chhhhh--------------------------ccCchhhccccchHHHHHHHHHhcCCccccccCCCchhhHHHhcChHH
Confidence            877654                          456788899999999999999999999999999999999999999999


Q ss_pred             HHHHHHhCCCCCCCCCCCCChHHHHHHHhCcHHHHHHHHH-----CCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q psy3308         474 IASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTE-----SGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKD  548 (838)
Q Consensus       474 ~v~~L~~~~~~~~~~~~~~~~~l~~A~~~~~~e~v~~L~~-----~~~~~~~~~~~~~~~l~~A~~~g~~~~~~~Ll~~~  548 (838)
                      ..+.|++.|+++...+..++.|+|.|+.+|..|..+.++.     .+..++.-+..+.+|||.|+..|+.++++.+++.+
T Consensus       169 ~~k~Li~~~a~~~K~~~~~~~~iH~aa~s~s~e~mEi~l~~~g~~r~~~in~~~n~~~~pLhlAve~g~~e~lk~~L~n~  248 (929)
T KOG0510|consen  169 AKKELINKGADPCKSDIDGNFPIHEAARSGSKECMEIFLPEHGYERQTHINFDNNEKATPLHLAVEGGDIEMLKMCLQNG  248 (929)
T ss_pred             HHHHHHhcCCCCCcccCcCCchHHHHHHhcchhhhhhhhccccchhhcccccccCCCCcchhhhhhcCCHHHHHHHHhCc
Confidence            8899999999999999999999999999999999999987     67778888889999999999999999999999988


Q ss_pred             CCCCCchhHHHHHhhcCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHH
Q psy3308         549 APVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLL  628 (838)
Q Consensus       549 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll  628 (838)
                      ........-  .......-++..|.+|.||||+|++.|+++.++.|+..|++++.++.++.+|||.|+.+|+.+.++-|+
T Consensus       249 ~~~a~~~~~--~~~q~kelv~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~I~~kn~d~~spLH~AA~yg~~ntv~rLL  326 (929)
T KOG0510|consen  249 KKIADVQLD--AMQQEKELVNDEDNDGCTPLHYAARQGGPESVDNLLGFGASINSKNKDEESPLHFAAIYGRINTVERLL  326 (929)
T ss_pred             cccchhhhH--HHHHHHHHhhcccccCCchHHHHHHcCChhHHHHHHHcCCcccccCCCCCCchHHHHHcccHHHHHHHH
Confidence            765533210  001111124556778888888888888888888888888888888888888888888888888888888


Q ss_pred             h-CC-CCCCccCCCCChHHHHHHHcCcHHHHHHHHhCCCCCC---CCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCC
Q psy3308         629 D-RG-ASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPN---AESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQ  703 (838)
Q Consensus       629 ~-~g-~~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~---~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~  703 (838)
                      + .| ...+..|..|.||||.|+.+||..+++.|++.|+...   ..|.+|.||||.|+..|+..+|++|+.+|+++...
T Consensus       327 ~~~~~rllne~D~~g~tpLHlaa~~gH~~v~qlLl~~GA~~~~~~e~D~dg~TaLH~Aa~~g~~~av~~Li~~Ga~I~~~  406 (929)
T KOG0510|consen  327 QESDTRLLNESDLHGMTPLHLAAKSGHDRVVQLLLNKGALFLNMSEADSDGNTALHLAAKYGNTSAVQKLISHGADIGVK  406 (929)
T ss_pred             hCcCccccccccccCCCchhhhhhcCHHHHHHHHHhcChhhhcccccccCCchhhhHHHHhccHHHHHHHHHcCCceeec
Confidence            7 32 3455566678888888888888888888888887765   34777888888888888888888888888888888


Q ss_pred             CCCCCcHhHH
Q psy3308         704 AKNGLTPLHL  713 (838)
Q Consensus       704 ~~~~~t~l~~  713 (838)
                      ++.|.++++.
T Consensus       407 n~~g~SA~~~  416 (929)
T KOG0510|consen  407 NKKGKSAFDT  416 (929)
T ss_pred             cccccccccc
Confidence            8888888775


No 17 
>PHA03095 ankyrin-like protein; Provisional
Probab=100.00  E-value=4.1e-40  Score=358.06  Aligned_cols=289  Identities=27%  Similarity=0.360  Sum_probs=190.0

Q ss_pred             HHHHcCCHHHHHHHHhCCCCCCCCCCCCChHHHHHHHhC---cHHHHHHHHHCCCCCcccCCCCCcHHHHHHHcC-CHHH
Q psy3308         465 VASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEG---QDEVASILTESGASITATTKKGFTPLHLAAKYG-RMKI  540 (838)
Q Consensus       465 ~a~~~~~~~~v~~L~~~~~~~~~~~~~~~~~l~~A~~~~---~~e~v~~L~~~~~~~~~~~~~~~~~l~~A~~~g-~~~~  540 (838)
                      .+...++.+++++|+++|++++..+..|.||||.|+..+   +.+++++|++.|++++.++..|.||||+|+..| +.++
T Consensus        20 ~~~~~~~~~~v~~Ll~~ga~vn~~~~~g~t~Lh~a~~~~~~~~~~iv~~Ll~~Gadin~~~~~g~TpLh~A~~~~~~~~i   99 (471)
T PHA03095         20 LNASNVTVEEVRRLLAAGADVNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGADVNAPERCGFTPLHLYLYNATTLDV   99 (471)
T ss_pred             HcCCCCCHHHHHHHHHcCCCcccCCCCCCCHHHHHHHhcCCChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCcHHH
Confidence            345566777777777777777777777777777777776   777777777777777777777777777777776 4666


Q ss_pred             HHHHHhCCCCCCCchhHHHHHhhcCCCccccCCCCCcHHHHHH--HcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHc
Q psy3308         541 AQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAA--KYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHY  618 (838)
Q Consensus       541 ~~~Ll~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~--~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~A~~~  618 (838)
                      +++|++.+.                 +++..+..|.||||.|+  ..++.+++++|+++|++++..+..|.||||.|+..
T Consensus       100 v~lLl~~ga-----------------~in~~~~~g~tpLh~a~~~~~~~~~iv~~Ll~~gad~~~~d~~g~tpL~~a~~~  162 (471)
T PHA03095        100 IKLLIKAGA-----------------DVNAKDKVGRTPLHVYLSGFNINPKVIRLLLRKGADVNALDLYGMTPLAVLLKS  162 (471)
T ss_pred             HHHHHHcCC-----------------CCCCCCCCCCCHHHHHhhCCcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHc
Confidence            666665433                 34556666666666666  34456666666666666666666666666666655


Q ss_pred             C--CHHHHHHHHhCCCCCCccCCCCChHHHHHHHc--CcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCcH--HHHHH
Q psy3308         619 D--HQNVALLLLDRGASPHAVAKNGYTPLHIAAKK--NQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHT--DMSSL  692 (838)
Q Consensus       619 ~--~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~--~~~~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~--~iv~~  692 (838)
                      +  +.+++++|+++|++++..+..|.||||.|+..  ++.++++.|++.|++++.+|..|.||||+|+..|+.  .+++.
T Consensus       163 ~~~~~~iv~~Ll~~g~~~~~~d~~g~t~Lh~~~~~~~~~~~i~~~Ll~~g~~~~~~d~~g~tpLh~Aa~~~~~~~~~v~~  242 (471)
T PHA03095        163 RNANVELLRLLIDAGADVYAVDDRFRSLLHHHLQSFKPRARIVRELIRAGCDPAATDMLGNTPLHSMATGSSCKRSLVLP  242 (471)
T ss_pred             CCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHHCCCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCchHHHHHH
Confidence            4  45666666666666666666666666666643  556666666666666666666666666666666643  45666


Q ss_pred             HHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCC
Q psy3308         693 LIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATT  770 (838)
Q Consensus       693 Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~  770 (838)
                      |++.|++++.++..|.||||+|+..|+.+++++|+++|++++.++..|+|||++|+..|+.+++++|++++++++..+
T Consensus       243 ll~~g~din~~d~~g~TpLh~A~~~~~~~~v~~LL~~gad~n~~~~~g~tpl~~A~~~~~~~~v~~LL~~~~~~~~~~  320 (471)
T PHA03095        243 LLIAGISINARNRYGQTPLHYAAVFNNPRACRRLIALGADINAVSSDGNTPLSLMVRNNNGRAVRAALAKNPSAETVA  320 (471)
T ss_pred             HHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCCHHHHHHHHHhCCCHHHHH
Confidence            666666666666666666666666666666666666666666666666666666666666666666666666655443


No 18 
>PHA03095 ankyrin-like protein; Provisional
Probab=100.00  E-value=2.6e-40  Score=359.55  Aligned_cols=289  Identities=28%  Similarity=0.353  Sum_probs=271.1

Q ss_pred             hhhcCcHHHHHHHHHCCCCcccCCCCCCcHHHHHHHcC---cHHHHHHHHHCCCCCCccccCCCcHHHHHHHcC-CHHHH
Q psy3308          69 FEATGQEEVAKILVDNGATINVQSLNGFTPLYMAAQEN---HDGVVRYLLSKGGNQTLATEHNITPLHVACKWG-KVAMV  144 (838)
Q Consensus        69 ~~~~g~~~~v~~l~~~~~~~~~~~~~~~t~l~~A~~~g---~~~~v~~L~~~~~~~~~~~~~~~~~l~~Aa~~g-~~~iv  144 (838)
                      ++..+++++|++|+++|++++.++..|.||||+|+..|   +.+++++|+++|++++..+..|.||||+|+..| +.+++
T Consensus        21 ~~~~~~~~~v~~Ll~~ga~vn~~~~~g~t~Lh~a~~~~~~~~~~iv~~Ll~~Gadin~~~~~g~TpLh~A~~~~~~~~iv  100 (471)
T PHA03095         21 NASNVTVEEVRRLLAAGADVNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGADVNAPERCGFTPLHLYLYNATTLDVI  100 (471)
T ss_pred             cCCCCCHHHHHHHHHcCCCcccCCCCCCCHHHHHHHhcCCChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCcHHHH
Confidence            56788999999999999999999999999999999999   999999999999999999999999999999999 59999


Q ss_pred             HHHHHcCCCCccccCCCCcHHHHHH--HcCCHHHHHHHHHcCCCccCCCCCCccHHHHHHhCC--cHHHHHHHHhCCCCC
Q psy3308         145 ELLISKGANIEAKTRDGLTPLHCAA--RSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGD--HEAATRVLIYHGAGV  220 (838)
Q Consensus       145 ~~L~~~~~~~~~~~~~~~tal~~A~--~~g~~~iv~~L~~~~~~~~~~~~~~~~~l~~A~~~g--~~~~v~~L~~~~~~~  220 (838)
                      ++|+++|++++..+..|.||||+|+  ..++.+++++|++.|++++..+..|.|||++|+..+  +.+++++|+++|+++
T Consensus       101 ~lLl~~ga~in~~~~~g~tpLh~a~~~~~~~~~iv~~Ll~~gad~~~~d~~g~tpL~~a~~~~~~~~~iv~~Ll~~g~~~  180 (471)
T PHA03095        101 KLLIKAGADVNAKDKVGRTPLHVYLSGFNINPKVIRLLLRKGADVNALDLYGMTPLAVLLKSRNANVELLRLLIDAGADV  180 (471)
T ss_pred             HHHHHcCCCCCCCCCCCCCHHHHHhhCCcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCC
Confidence            9999999999999999999999999  567899999999999999999999999999998765  689999999999999


Q ss_pred             CcccCCCccHHHHHHhc--CCHHHHHHHHHCCCCccccccCCCchHHHHHhhCCccccccChHHHHHHHHhCCCCCCCCC
Q psy3308         221 DEITVDYLTALHVASHC--GHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARA  298 (838)
Q Consensus       221 ~~~~~~~~~~l~~A~~~--g~~~iv~~L~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~i~~~Ll~~~~~~~~~~  298 (838)
                      +..+..+.||||+|+..  ++.+++++|++.|++++..+..|.||||+|+..+..      ...+++.|++.|++++.++
T Consensus       181 ~~~d~~g~t~Lh~~~~~~~~~~~i~~~Ll~~g~~~~~~d~~g~tpLh~Aa~~~~~------~~~~v~~ll~~g~din~~d  254 (471)
T PHA03095        181 YAVDDRFRSLLHHHLQSFKPRARIVRELIRAGCDPAATDMLGNTPLHSMATGSSC------KRSLVLPLLIAGISINARN  254 (471)
T ss_pred             cccCCCCCCHHHHHHHHCCCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCc------hHHHHHHHHHcCCCCCCcC
Confidence            88888999999999875  789999999999999999999999999999998743      3468899999999999999


Q ss_pred             CCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCC
Q psy3308         299 LNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTA  363 (838)
Q Consensus       299 ~~~~~~l~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~iv~~Ll~~~~~~~~~  363 (838)
                      ..|.||||.|+..|+.+++++|++.|++++..+..|.|||+.|+.+|+.+++++|++.+++++..
T Consensus       255 ~~g~TpLh~A~~~~~~~~v~~LL~~gad~n~~~~~g~tpl~~A~~~~~~~~v~~LL~~~~~~~~~  319 (471)
T PHA03095        255 RYGQTPLHYAAVFNNPRACRRLIALGADINAVSSDGNTPLSLMVRNNNGRAVRAALAKNPSAETV  319 (471)
T ss_pred             CCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCCHHHHHHHHHhCCCHHHH
Confidence            99999999999999999999999999999999999999999999999999999999988776543


No 19 
>PHA03100 ankyrin repeat protein; Provisional
Probab=100.00  E-value=5.8e-40  Score=357.43  Aligned_cols=281  Identities=30%  Similarity=0.433  Sum_probs=244.1

Q ss_pred             HHHHHHHHHCCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCchhHHHHHhhcCCCccccCCCCCcHHHH---
Q psy3308         505 DEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHL---  581 (838)
Q Consensus       505 ~e~v~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~---  581 (838)
                      .++++++++.+...+..+..+.+||+.|+..|+.+++++|++.|.+                 ++..+..+.+|++.   
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~ivk~Ll~~g~~-----------------~~~~~~~~~t~L~~~~~   77 (480)
T PHA03100         15 VKNIKYIIMEDDLNDYSYKKPVLPLYLAKEARNIDVVKILLDNGAD-----------------INSSTKNNSTPLHYLSN   77 (480)
T ss_pred             HHHHHHHHhcCccchhhhcccchhhhhhhccCCHHHHHHHHHcCCC-----------------CCCccccCcCHHHHHHH
Confidence            3555666655544555556666666666666666666666665443                 23344566677777   


Q ss_pred             --HHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHH--HcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHcC--cHH
Q psy3308         582 --AAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVAS--HYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKN--QMD  655 (838)
Q Consensus       582 --a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~A~--~~~~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~~--~~~  655 (838)
                        |+..++.+++++|+++|++++..+..|.|||++|+  ..|+.+++++|+++|++++..+..|.||||.|+..|  +.+
T Consensus        78 ~~a~~~~~~~iv~~Ll~~ga~i~~~d~~g~tpL~~A~~~~~~~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~  157 (480)
T PHA03100         78 IKYNLTDVKEIVKLLLEYGANVNAPDNNGITPLLYAISKKSNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESNKIDLK  157 (480)
T ss_pred             HHHHhhchHHHHHHHHHCCCCCCCCCCCCCchhhHHHhcccChHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCChHH
Confidence              88899999999999999999999999999999999  999999999999999999999999999999999999  999


Q ss_pred             HHHHHHhCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCC------CcHhHHHHhcCC--HHHHHHHH
Q psy3308         656 IATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNG------LTPLHLCAQEDK--VNVATITM  727 (838)
Q Consensus       656 iv~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~------~t~l~~A~~~g~--~~i~~~L~  727 (838)
                      ++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++..+..|      .||||.|+..|+  .+++++|+
T Consensus       158 iv~~Ll~~g~din~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll  237 (480)
T PHA03100        158 ILKLLIDKGVDINAKNRYGYTPLHIAVEKGNIDVIKFLLDNGADINAGDIETLLFTIFETPLHIAACYNEITLEVVNYLL  237 (480)
T ss_pred             HHHHHHHCCCCcccccCCCCCHHHHHHHhCCHHHHHHHHHcCCCccCCCCCCCcHHHHHhHHHHHHHhCcCcHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999888888      899999999999  99999999


Q ss_pred             hCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCCCC
Q psy3308         728 FNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNAT  802 (838)
Q Consensus       728 ~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ga~~~~~  802 (838)
                      ++|++++.+|..|+||||+|+..|+.+++++|+++|++++..|..|.|||++|++.++.+++++|+++|++++..
T Consensus       238 ~~g~din~~d~~g~TpL~~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpl~~A~~~~~~~iv~~Ll~~g~~i~~i  312 (480)
T PHA03100        238 SYGVPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIAILNNNKEIFKLLLNNGPSIKTI  312 (480)
T ss_pred             HcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHhCCHHHHHHHHhcCCCHHHH
Confidence            999999999999999999999999999999999999999999999999999999999999999999999988764


No 20 
>PHA03100 ankyrin repeat protein; Provisional
Probab=100.00  E-value=4.6e-39  Score=350.36  Aligned_cols=289  Identities=31%  Similarity=0.459  Sum_probs=245.1

Q ss_pred             cCcHHHHHHHHHCCCCcccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCccccCCCcHHHH-----HHHcCCHHHHHH
Q psy3308          72 TGQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHV-----ACKWGKVAMVEL  146 (838)
Q Consensus        72 ~g~~~~v~~l~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~~l~~-----Aa~~g~~~iv~~  146 (838)
                      ....++++++++.+...+..+..+.||||.|+..|+.++|++|+++|++++..+..+.|||++     |+..|+.++|++
T Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~ivk~Ll~~g~~~~~~~~~~~t~L~~~~~~~a~~~~~~~iv~~   91 (480)
T PHA03100         12 IIKVKNIKYIIMEDDLNDYSYKKPVLPLYLAKEARNIDVVKILLDNGADINSSTKNNSTPLHYLSNIKYNLTDVKEIVKL   91 (480)
T ss_pred             HHHHHHHHHHHhcCccchhhhcccchhhhhhhccCCHHHHHHHHHcCCCCCCccccCcCHHHHHHHHHHHhhchHHHHHH
Confidence            345678899998887777888899999999999999999999999999999999999999999     999999999999


Q ss_pred             HHHcCCCCccccCCCCcHHHHHH--HcCCHHHHHHHHHcCCCccCCCCCCccHHHHHHhCC--cHHHHHHHHhCCCCCCc
Q psy3308         147 LISKGANIEAKTRDGLTPLHCAA--RSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGD--HEAATRVLIYHGAGVDE  222 (838)
Q Consensus       147 L~~~~~~~~~~~~~~~tal~~A~--~~g~~~iv~~L~~~~~~~~~~~~~~~~~l~~A~~~g--~~~~v~~L~~~~~~~~~  222 (838)
                      |+++|++++..+..|.|||++|+  ..|+.++|++|++.|++++..+..|.+||++|+..|  +.+++++|+++|++++.
T Consensus        92 Ll~~ga~i~~~d~~g~tpL~~A~~~~~~~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g~din~  171 (480)
T PHA03100         92 LLEYGANVNAPDNNGITPLLYAISKKSNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESNKIDLKILKLLIDKGVDINA  171 (480)
T ss_pred             HHHCCCCCCCCCCCCCchhhHHHhcccChHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCChHHHHHHHHHCCCCccc
Confidence            99999999999999999999999  999999999999999999888999999999999999  99999999999999988


Q ss_pred             ccCCCccHHHHHHhcCCHHHHHHHHHCCCCccccccCCCchHHHHHhhCCccccccChHHHHHHHHhCCCCCCCCCCCCC
Q psy3308         223 ITVDYLTALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGF  302 (838)
Q Consensus       223 ~~~~~~~~l~~A~~~g~~~iv~~L~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~i~~~Ll~~~~~~~~~~~~~~  302 (838)
                      .+..|.|||++|+..|+.+++++|+++|++++..+..+.++++.                                   .
T Consensus       172 ~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~-----------------------------------~  216 (480)
T PHA03100        172 KNRYGYTPLHIAVEKGNIDVIKFLLDNGADINAGDIETLLFTIF-----------------------------------E  216 (480)
T ss_pred             ccCCCCCHHHHHHHhCCHHHHHHHHHcCCCccCCCCCCCcHHHH-----------------------------------H
Confidence            88889999999999999999999999999888887777444432                                   3


Q ss_pred             cHHHHHHHcCC--HHHHHHHHhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCcH
Q psy3308         303 TPLHIACKKNR--YKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLAARANQT  380 (838)
Q Consensus       303 ~~l~~A~~~g~--~~~v~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~l~~A~~~g~~  380 (838)
                      ||||.|+..|+  .+++++|+++|++++.++..|.||||+|+..|+.+++++|++.|++++..+..|.||+++|+..++.
T Consensus       217 t~l~~a~~~~~~~~~iv~~Ll~~g~din~~d~~g~TpL~~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpl~~A~~~~~~  296 (480)
T PHA03100        217 TPLHIAACYNEITLEVVNYLLSYGVPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIAILNNNK  296 (480)
T ss_pred             hHHHHHHHhCcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHhCCH
Confidence            56777777777  7777777777777777777777777777777777777777777777777777777777777777777


Q ss_pred             HHHHHHHHCCCCccc
Q psy3308         381 DIVRILLRNGASVDA  395 (838)
Q Consensus       381 ~iv~~Ll~~g~~~~~  395 (838)
                      +++++|+++|++++.
T Consensus       297 ~iv~~Ll~~g~~i~~  311 (480)
T PHA03100        297 EIFKLLLNNGPSIKT  311 (480)
T ss_pred             HHHHHHHhcCCCHHH
Confidence            777777777776554


No 21 
>KOG0508|consensus
Probab=100.00  E-value=4.5e-39  Score=305.82  Aligned_cols=215  Identities=30%  Similarity=0.452  Sum_probs=182.3

Q ss_pred             CCchHHHHHHHhhcCC---------CCCCCCcHHhHHHhcCCHHHHHHHHhccccccchhhcccCcchhhhccchhhhhc
Q psy3308           2 QQGHDRVVAVLLENDT---------KGKVKLPALHIAAKKDDCKAAALLLEVSFSNTKLEVSLSNTKLEVSLSNTKFEAT   72 (838)
Q Consensus         2 ~~g~~~iv~~l~~~~~---------~~~~~~~al~~Aa~~g~~~~v~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (838)
                      +.|.+..++-|+.+.+         ....+.+||-+||++||.++|+||++.-      ..+.              .+.
T Consensus        13 ~~g~l~~l~~ll~~~s~~ei~~l~~~~~~g~tPL~iaaRnGH~~vVeyLle~~------~a~~--------------e~~   72 (615)
T KOG0508|consen   13 RDGKLQLLAKLLINSSNEEIISLIGEVQNGGTPLLIAARNGHADVVEYLLEHC------RASP--------------EQG   72 (615)
T ss_pred             hhhhHHHHHHHHhCCchHHHHHHhccccCCCCceeeehhcCcHHHHHHHHHHh------cCCc--------------cCC
Confidence            4566666666665532         1223558999999999999999999821      1100              011


Q ss_pred             CcHHHHHHHHHCCCCcccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHcCC
Q psy3308          73 GQEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGA  152 (838)
Q Consensus        73 g~~~~v~~l~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~~l~~Aa~~g~~~iv~~L~~~~~  152 (838)
                      |.           ..++-....|-+||+.|+..||+++||.|+++|+++|.++..+.|||--||.-||+||||||+++|+
T Consensus        73 Gs-----------V~FDge~IegappLWaAsaAGHl~vVk~L~~~ga~VN~tT~TNStPLraACfDG~leivKyLvE~ga  141 (615)
T KOG0508|consen   73 GS-----------VRFDGETIEGAPPLWAASAAGHLEVVKLLLRRGASVNDTTRTNSTPLRAACFDGHLEIVKYLVEHGA  141 (615)
T ss_pred             ce-----------EEeCCcccCCCchhhHHhccCcHHHHHHHHHhcCccccccccCCccHHHHHhcchhHHHHHHHHcCC
Confidence            11           1223345678899999999999999999999999999998889999999999999999999999999


Q ss_pred             CCccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCccHHHHHHhCCcHHHHHHHHhCCCCCCcccCCCccHHH
Q psy3308         153 NIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALH  232 (838)
Q Consensus       153 ~~~~~~~~~~tal~~A~~~g~~~iv~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~~l~  232 (838)
                      +++..++.|.|+||.||..||.+|++||++.|++++.++..|+||||.|+..|++|++|+|+.+|+.++ .+..|.|||.
T Consensus       142 d~~IanrhGhTcLmIa~ykGh~~I~qyLle~gADvn~ks~kGNTALH~caEsG~vdivq~Ll~~ga~i~-~d~~GmtPL~  220 (615)
T KOG0508|consen  142 DPEIANRHGHTCLMIACYKGHVDIAQYLLEQGADVNAKSYKGNTALHDCAESGSVDIVQLLLKHGAKID-VDGHGMTPLL  220 (615)
T ss_pred             CCcccccCCCeeEEeeeccCchHHHHHHHHhCCCcchhcccCchHHHhhhhcccHHHHHHHHhCCceee-ecCCCCchHH
Confidence            999999999999999999999999999999999999999999999999999999999999999999876 4667999999


Q ss_pred             HHHhcCCHHHHHHHHH
Q psy3308         233 VASHCGHVRVAKTLLD  248 (838)
Q Consensus       233 ~A~~~g~~~iv~~L~~  248 (838)
                      .|+..|+.++|.+|++
T Consensus       221 ~Aa~tG~~~iVe~L~~  236 (615)
T KOG0508|consen  221 LAAVTGHTDIVERLLQ  236 (615)
T ss_pred             HHhhhcchHHHHHHhc
Confidence            9999999999999997


No 22 
>PHA02878 ankyrin repeat protein; Provisional
Probab=100.00  E-value=1.2e-38  Score=343.59  Aligned_cols=294  Identities=21%  Similarity=0.305  Sum_probs=181.8

Q ss_pred             CChHHHHHHHhCcHHHHHHHHHCCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCchhHHHHHhhcCCCcccc
Q psy3308         492 GYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITAT  571 (838)
Q Consensus       492 ~~~~l~~A~~~~~~e~v~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~l~~~~~~~~~~  571 (838)
                      +.+|||.|+..|+.+++++|++.|++++.++..|.||||+|+..|+.+++++|++......                   
T Consensus        37 ~~tPLh~A~~~g~~e~vk~Ll~~gadvn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~~~~~~-------------------   97 (477)
T PHA02878         37 PFIPLHQAVEARNLDVVKSLLTRGHNVNQPDHRDLTPLHIICKEPNKLGMKEMIRSINKCS-------------------   97 (477)
T ss_pred             CcchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCccHhHHHHHHHHHhccc-------------------
Confidence            3444444444444444444444444444444444455555554444444444444321110                   


Q ss_pred             CCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHc--CCHHHHHHHHhCCCCCCccCCC-CChHHHHH
Q psy3308         572 TKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHY--DHQNVALLLLDRGASPHAVAKN-GYTPLHIA  648 (838)
Q Consensus       572 ~~~~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~A~~~--~~~~~v~~Ll~~g~~~~~~~~~-~~t~L~~A  648 (838)
                      ...+.++++.|+..++.+++++|+..+.+.+... + ...+......  ...+++++|+++|++++..+.. |.||||+|
T Consensus        98 ~~~~~~~l~~a~~~~~~ei~~~Ll~~~~~~~~~~-~-~~~~~~~~~~~~~~~~iv~~Ll~~gadin~~~~~~g~tpLh~A  175 (477)
T PHA02878         98 VFYTLVAIKDAFNNRNVEIFKIILTNRYKNIQTI-D-LVYIDKKSKDDIIEAEITKLLLSYGADINMKDRHKGNTALHYA  175 (477)
T ss_pred             cccchhhHHHHHHcCCHHHHHHHHhCcccCcccC-c-HHHHhhccchhhHHHHHHHHHHHcCCCCCccCCCCCCCHHHHH
Confidence            0123345555555555555555555433221110 0 0001111111  1234777777777777777776 77777777


Q ss_pred             HHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhc-CCHHHHHHHH
Q psy3308         649 AKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQE-DKVNVATITM  727 (838)
Q Consensus       649 ~~~~~~~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~-g~~~i~~~L~  727 (838)
                      +..|+.+++++|+++|++++..+..|.||||.|+..|+.+++++|+++|++++.++..|.||||+|+.. ++.+++++|+
T Consensus       176 ~~~~~~~iv~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll  255 (477)
T PHA02878        176 TENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDARDKCGNTPLHISVGYCKDYDILKLLL  255 (477)
T ss_pred             HhCCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHH
Confidence            777777777777777777777777777777777777777777777777777777777777777777764 5777777777


Q ss_pred             hCCCCCCCCCC-CCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhC-cHHHHHHHHhC-----CCCCC
Q psy3308         728 FNGAEIDPVTK-AGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQG-RVLIIDLLLGA-----GAQPN  800 (838)
Q Consensus       728 ~~~~~~~~~~~-~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~-~~~~v~~Ll~~-----ga~~~  800 (838)
                      ++|++++.++. .|+||||+|  .++.+++++|+++|+++|..|..|.|||++|++.+ ..+++++|+.+     +++++
T Consensus       256 ~~gadvn~~~~~~g~TpLh~A--~~~~~~v~~Ll~~gadin~~d~~g~TpL~~A~~~~~~~~~~~~li~~~~~~~~~~~~  333 (477)
T PHA02878        256 EHGVDVNAKSYILGLTALHSS--IKSERKLKLLLEYGADINSLNSYKLTPLSSAVKQYLCINIGRILISNICLLKRIKPD  333 (477)
T ss_pred             HcCCCCCccCCCCCCCHHHHH--ccCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHHcCccchHHHHHHHHHHHHhccCc
Confidence            77777777664 677888877  45677788888888888887777888888887653 45566666543     46677


Q ss_pred             CCCCccch
Q psy3308         801 ATTNLFCC  808 (838)
Q Consensus       801 ~~~~~~~~  808 (838)
                      .++..|-.
T Consensus       334 ~~~~~g~~  341 (477)
T PHA02878        334 IKNSEGFI  341 (477)
T ss_pred             ccCcHHHH
Confidence            77766644


No 23 
>PHA02792 ankyrin-like protein; Provisional
Probab=100.00  E-value=1.2e-37  Score=322.62  Aligned_cols=429  Identities=14%  Similarity=0.125  Sum_probs=295.9

Q ss_pred             HHHHHHhCCCCCCCCCCCCCcHHHHHHHcCC-HHHHHHHHhCCCCccccCCCCCcHHHH-HHHcCCHHHHHHHHHcCCCC
Q psy3308         283 VAKTLLDRKADPNARALNGFTPLHIACKKNR-YKVVELLLKYGASIAATTESGLTPLHV-ASFMGCMNIAIFLLQAGAAP  360 (838)
Q Consensus       283 i~~~Ll~~~~~~~~~~~~~~~~l~~A~~~g~-~~~v~~L~~~~~~~~~~~~~~~~~l~~-A~~~g~~~iv~~Ll~~~~~~  360 (838)
                      -.+.|+++|++|-. ...+.|||+.-..+.+ ..-++.++..+..++..+.++.+++++ |+.+|++|+|++|+++|+++
T Consensus        20 ~~~~l~~~g~~~~~-~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~s~n~~lElvk~LI~~GAdv   98 (631)
T PHA02792         20 SAQSLIESGANPLY-EYDGETPLKAYVTKKNNNIKNDVVILLLSSVDYKNINDFDIFEYLCSDNIDIELLKLLISKGLEI   98 (631)
T ss_pred             HHHHHHHcCCCccc-ccCCCccHHHHHhhhhhhHHHHHHHHHHhCCCcCccCCccHHHHHHHhcccHHHHHHHHHcCCCc
Confidence            36789999999988 5778899998876654 344667777777788888899999976 56789999999999999999


Q ss_pred             CCCCCCCCcHHHHHHH-cCcHHHHHHHHHCCCCccccccCCCCHHHHHHhhCcccchhhhhhcccCCCCHHHHHHHcCCH
Q psy3308         361 DTATVRGETPLHLAAR-ANQTDIVRILLRNGASVDARAREDQTPLHVASRLRRFSSASQSALTRVRGETPLHLAARANQT  439 (838)
Q Consensus       361 ~~~~~~~~~~l~~A~~-~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~  439 (838)
                      +..+..+.+++++|+. .++.|++++|+++|+++.+.+..|.||+........+-                         
T Consensus        99 N~~~n~~~~~l~ya~~~~~~~eivk~Ll~~Gad~~~~~~~g~~~~~~~~~~~~~~-------------------------  153 (631)
T PHA02792         99 NSIKNGINIVEKYATTSNPNVDVFKLLLDKGIPTCSNIQYGYKIIIEQITRAEYY-------------------------  153 (631)
T ss_pred             ccccCCCCcceeEeecCCCChHHHHHHHHCCCCcccccccCcchhhhhccccccc-------------------------
Confidence            9999888999999965 69999999999999999888888887765433211110                         


Q ss_pred             HHHHHH--HHCCCCCCCCCCCCCcHHHHHHHcC-------CHHHHHHHHhCCCCCCCCCCCCChHHHHHHHhC--cHHHH
Q psy3308         440 DIVRIL--LRNGASVDARAREDQTPLHVASRLG-------NGDIASLLLQHGASVDAPTKDGYTALHISAKEG--QDEVA  508 (838)
Q Consensus       440 ~iv~~L--l~~~~~~~~~~~~~~~~l~~a~~~~-------~~~~v~~L~~~~~~~~~~~~~~~~~l~~A~~~~--~~e~v  508 (838)
                      +--..+  -+.+..++..+..|.||||+|+..+       +.++++.|+++|++++..|..|.||||+|+.+.  ..|++
T Consensus       154 ~~~~~~~~~~~~~~i~~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~~~~~d~~g~t~l~~~~~~~~i~~ei~  233 (631)
T PHA02792        154 NWDDELDDYDYDYTTDYDDRMGKTVLYYYIITRSQDGYATSLDVINYLISHEKEMRYYTYREHTTLYYYVDKCDIKREIF  233 (631)
T ss_pred             chhhhccccccccccccCCCCCCchHHHHHhhCCcccccCCHHHHHHHHhCCCCcCccCCCCChHHHHHHHcccchHHHH
Confidence            000000  0113344566777888888888887       788888888888888888888888888888887  77888


Q ss_pred             HHHHHCCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCchhHHHHHhhcCCCccccCCCCCcHHHHHHHcCcH
Q psy3308         509 SILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRM  588 (838)
Q Consensus       509 ~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~  588 (838)
                      ++|++...+..    ..+           --+..||..+....+                               ..-+.
T Consensus       234 ~~L~~~~~~~~----~~~-----------~~l~~y~~~~~~~~~-------------------------------~~id~  267 (631)
T PHA02792        234 DALFDSNYSGN----ELM-----------NILSNYLRKQYRNKN-------------------------------HKIDN  267 (631)
T ss_pred             HHHHhcccccc----chH-----------hHHHHHHHHHhccCc-------------------------------cCccH
Confidence            88876411110    000           011122221110000                               00013


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCC-HHHHHHHHhCCCCCCccCCCCChHHHHHHHcC--cHHHHHHHHhCCC
Q psy3308         589 KIAQMLLQKDAPVDSQGKNGVTPLHVASHYDH-QNVALLLLDRGASPHAVAKNGYTPLHIAAKKN--QMDIATTLLEYNA  665 (838)
Q Consensus       589 ~~v~~Ll~~~~~~~~~~~~~~~~l~~A~~~~~-~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~~--~~~iv~~Ll~~~~  665 (838)
                      .+|..|++.+-.-+.        +........ ..+...|....       ..-+..||.=...+  +.+++++|+++|+
T Consensus       268 ~iv~~ll~~~~~~~i--------~~~~~~~~~~~~~~~~~~~~~-------~~~q~~l~~Yl~~~~v~ieiIK~LId~Ga  332 (631)
T PHA02792        268 YIVDKLLSGHDTFYI--------LELCNSLRNNIIISSILKRYT-------DSIQDLLSEYVSYHTVYINVIKCMIDEGA  332 (631)
T ss_pred             HHHHHHHhCCCccch--------hhhhhhhhhhhHHHHHHHHHh-------HHHHHHHHHHHhcCCccHHHHHHHHHCCC
Confidence            366666655432111        111111111 11111111110       01123344444444  5788899998888


Q ss_pred             CCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCC--CcHhHHHHhcCCH---HHHHHHHhCCCCCCCCCCCC
Q psy3308         666 KPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNG--LTPLHLCAQEDKV---NVATITMFNGAEIDPVTKAG  740 (838)
Q Consensus       666 ~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~--~t~l~~A~~~g~~---~i~~~L~~~~~~~~~~~~~g  740 (838)
                      +...  .....+++.|+..|+.++|++|+++|++++.++..|  .||||.|+.....   +++++|+++|+++|.+|..|
T Consensus       333 ~~~r--~~~~n~~~~Aa~~gn~eIVelLIs~GADIN~kD~~g~~~TpLh~A~~n~~~~v~~IlklLIs~GADIN~kD~~G  410 (631)
T PHA02792        333 TLYR--FKHINKYFQKFDNRDPKVVEYILKNGNVVVEDDDNIINIMPLFPTLSIHESDVLSILKLCKPYIDDINKIDKHG  410 (631)
T ss_pred             cccc--CCcchHHHHHHHcCCHHHHHHHHHcCCchhhhcCCCCChhHHHHHHHhccHhHHHHHHHHHhcCCccccccccC
Confidence            7642  224567888888899999999999999988887664  5888887776654   35788889999999999999


Q ss_pred             CcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHH----------hCcHHHHHHHHhCCCCCC
Q psy3308         741 FTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQ----------QGRVLIIDLLLGAGAQPN  800 (838)
Q Consensus       741 ~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~----------~~~~~~v~~Ll~~ga~~~  800 (838)
                      +||||+|+..++.+++++|+++|++++.+|..|.|||++|+.          ....+++++|+++|.++.
T Consensus       411 ~TPLh~Aa~~~n~eivelLLs~GADIN~kD~~G~TpL~~A~~~~~~~~~~i~~~~~~il~lLLs~~p~i~  480 (631)
T PHA02792        411 RSILYYCIESHSVSLVEWLIDNGADINITTKYGSTCIGICVILAHACIPEIAELYIKILEIILSKLPTIE  480 (631)
T ss_pred             cchHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHHHhcccHHHHHHHHHHHHHHHhcCCChh
Confidence            999999999999999999999999999999999999999875          223567999999987765


No 24 
>KOG0508|consensus
Probab=100.00  E-value=5.1e-38  Score=298.68  Aligned_cols=155  Identities=38%  Similarity=0.534  Sum_probs=121.0

Q ss_pred             CCCccHHHHHHhCCcHHHHHHHHhCCCCCCcccCCCccHHHHHHhcCCHHHHHHHHHCCCCccccccCCCchHHHHHhhC
Q psy3308         192 KNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHIACKKN  271 (838)
Q Consensus       192 ~~~~~~l~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~iv~~L~~~~~~~~~~~~~~~~~l~~a~~~~  271 (838)
                      ..|..||-.|+..||+++||.|+++|+++|..+....|||-.|+.-||+|+||||+++|+|++..+..|.|.|+.||.+|
T Consensus        82 IegappLWaAsaAGHl~vVk~L~~~ga~VN~tT~TNStPLraACfDG~leivKyLvE~gad~~IanrhGhTcLmIa~ykG  161 (615)
T KOG0508|consen   82 IEGAPPLWAASAAGHLEVVKLLLRRGASVNDTTRTNSTPLRAACFDGHLEIVKYLVEHGADPEIANRHGHTCLMIACYKG  161 (615)
T ss_pred             cCCCchhhHHhccCcHHHHHHHHHhcCccccccccCCccHHHHHhcchhHHHHHHHHcCCCCcccccCCCeeEEeeeccC
Confidence            34555666666666666666666666666666666667777777788888888888878888877777888888877776


Q ss_pred             CccccccChHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCCHHHHH
Q psy3308         272 RYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAI  351 (838)
Q Consensus       272 ~~~~~~~~~~~i~~~Ll~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~iv~  351 (838)
                              |.+|+++|++.|+++|.++..|.|+||.+++.|++|++|+|+++|+.++ .+..|.|||..|+..|+.++|+
T Consensus       162 --------h~~I~qyLle~gADvn~ks~kGNTALH~caEsG~vdivq~Ll~~ga~i~-~d~~GmtPL~~Aa~tG~~~iVe  232 (615)
T KOG0508|consen  162 --------HVDIAQYLLEQGADVNAKSYKGNTALHDCAESGSVDIVQLLLKHGAKID-VDGHGMTPLLLAAVTGHTDIVE  232 (615)
T ss_pred             --------chHHHHHHHHhCCCcchhcccCchHHHhhhhcccHHHHHHHHhCCceee-ecCCCCchHHHHhhhcchHHHH
Confidence                    6778888888888888888888888999999999999999998888875 4556889999999999999999


Q ss_pred             HHHH
Q psy3308         352 FLLQ  355 (838)
Q Consensus       352 ~Ll~  355 (838)
                      +|++
T Consensus       233 ~L~~  236 (615)
T KOG0508|consen  233 RLLQ  236 (615)
T ss_pred             HHhc
Confidence            8886


No 25 
>PHA02989 ankyrin repeat protein; Provisional
Probab=100.00  E-value=9.7e-38  Score=337.22  Aligned_cols=283  Identities=20%  Similarity=0.310  Sum_probs=205.7

Q ss_pred             CCHHHHHHHHhCCCCCCCCCCCCChHHHHHHHh--CcHHHHHHHHHCCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhC
Q psy3308         470 GNGDIASLLLQHGASVDAPTKDGYTALHISAKE--GQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQK  547 (838)
Q Consensus       470 ~~~~~v~~L~~~~~~~~~~~~~~~~~l~~A~~~--~~~e~v~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~~~~~Ll~~  547 (838)
                      ...+++++|+++|+++|.. ..|.++++.++..  ++.+++++|+++|++++.++ .+.|||+.|+..+..         
T Consensus        14 ~~~~~v~~LL~~GadvN~~-~~g~t~l~~~~~~~~~~~~iv~~Ll~~GAdvn~~~-~~~tpL~~a~~~~~~---------   82 (494)
T PHA02989         14 VDKNALEFLLRTGFDVNEE-YRGNSILLLYLKRKDVKIKIVKLLIDNGADVNYKG-YIETPLCAVLRNREI---------   82 (494)
T ss_pred             CcHHHHHHHHHcCCCcccc-cCCCCHHHHHHhcCCCChHHHHHHHHcCCCccCCC-CCCCcHHHHHhccCc---------
Confidence            4556666666666666655 3455555543332  24566666666666666543 345555544432210         


Q ss_pred             CCCCCCchhHHHHHhhcCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHc---CCHHHH
Q psy3308         548 DAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHY---DHQNVA  624 (838)
Q Consensus       548 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~A~~~---~~~~~v  624 (838)
                                                         ...++.+++++|+++|+++|.++..|.|||+.|+..   ++.+++
T Consensus        83 -----------------------------------~~~~~~~iv~~Ll~~Gadin~~d~~g~tpL~~a~~~~~~~~~eiv  127 (494)
T PHA02989         83 -----------------------------------TSNKIKKIVKLLLKFGADINLKTFNGVSPIVCFIYNSNINNCDML  127 (494)
T ss_pred             -----------------------------------chhhHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhcccCcHHHH
Confidence                                               012456788888888888888888888888877654   567888


Q ss_pred             HHHHhCCCCC-CccCCCCChHHHHHHHc--CcHHHHHHHHhCCCCCCC-CCCCCCcHHHHHHHcC----cHHHHHHHHhC
Q psy3308         625 LLLLDRGASP-HAVAKNGYTPLHIAAKK--NQMDIATTLLEYNAKPNA-ESKAGFTPLHLSAQEG----HTDMSSLLIEH  696 (838)
Q Consensus       625 ~~Ll~~g~~~-~~~~~~~~t~L~~A~~~--~~~~iv~~Ll~~~~~~~~-~~~~g~t~L~~A~~~g----~~~iv~~Ll~~  696 (838)
                      ++|+++|+++ +..+..|.||||.|+..  ++.++|++|+++|++++. .+..|.|||+.|++.+    +.+++++|+++
T Consensus       128 ~~Ll~~Gadin~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~~Gadi~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~  207 (494)
T PHA02989        128 RFLLSKGINVNDVKNSRGYNLLHMYLESFSVKKDVIKILLSFGVNLFEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKK  207 (494)
T ss_pred             HHHHHCCCCcccccCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCccccccccCCChHHHHHhcccccccHHHHHHHHhC
Confidence            8888888888 67778888888887654  577888888888888877 5677888888877654    78888888888


Q ss_pred             CCCCCCCCCCCCcHhHHHHhc------CCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCC
Q psy3308         697 GATVSHQAKNGLTPLHLCAQE------DKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATT  770 (838)
Q Consensus       697 g~~~~~~~~~~~t~l~~A~~~------g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~  770 (838)
                      |++++..+..+.++|+.++..      +..+++++|.. ++++|.+|..|+||||+|+..|+.+++++|+++|+++|.+|
T Consensus       208 Ga~vn~~~~~~~t~l~~~~~~~~~~~~~~~~il~~l~~-~advn~~d~~G~TpL~~Aa~~~~~~~v~~LL~~Gadin~~d  286 (494)
T PHA02989        208 GVNIETNNNGSESVLESFLDNNKILSKKEFKVLNFILK-YIKINKKDKKGFNPLLISAKVDNYEAFNYLLKLGDDIYNVS  286 (494)
T ss_pred             CCCccccCCccccHHHHHHHhchhhcccchHHHHHHHh-CCCCCCCCCCCCCHHHHHHHhcCHHHHHHHHHcCCCccccC
Confidence            888888887788888876654      34567776654 68888888888888888888888888888888888888888


Q ss_pred             CCCCcHHHHHHHhCcHHHHHHHHhCCCCC
Q psy3308         771 NLGYTPLHQASQQGRVLIIDLLLGAGAQP  799 (838)
Q Consensus       771 ~~g~t~l~~A~~~~~~~~v~~Ll~~ga~~  799 (838)
                      ..|+|||++|++.|+.++|++|++.+...
T Consensus       287 ~~G~TpL~~A~~~~~~~iv~~LL~~~p~~  315 (494)
T PHA02989        287 KDGDTVLTYAIKHGNIDMLNRILQLKPGK  315 (494)
T ss_pred             CCCCCHHHHHHHcCCHHHHHHHHhcCCCh
Confidence            88888888888888888888888876543


No 26 
>PHA02791 ankyrin-like protein; Provisional
Probab=100.00  E-value=1.4e-37  Score=300.98  Aligned_cols=236  Identities=17%  Similarity=0.204  Sum_probs=212.8

Q ss_pred             cCCHHHHHHHHhCCCCCCCchhHHHHHhhcCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHH
Q psy3308         535 YGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHV  614 (838)
Q Consensus       535 ~g~~~~~~~Ll~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~  614 (838)
                      +++.+++++|.+++.                   +..|..|.||||+|+..|+.+++++|++.|++++..+  +.||||+
T Consensus         9 ~~~~~~~~~Lis~~a-------------------~~~D~~G~TpLh~Aa~~g~~eiv~~Ll~~ga~~n~~d--~~TpLh~   67 (284)
T PHA02791          9 WKSKQLKSFLSSKDA-------------------FKADVHGHSALYYAIADNNVRLVCTLLNAGALKNLLE--NEFPLHQ   67 (284)
T ss_pred             cCHHHHHHHHHhCCC-------------------CCCCCCCCcHHHHHHHcCCHHHHHHHHHCcCCCcCCC--CCCHHHH
Confidence            456778888887654                   3457789999999999999999999999999988764  6899999


Q ss_pred             HHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCC-cHHHHHHHcCcHHHHHHH
Q psy3308         615 ASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGF-TPLHLSAQEGHTDMSSLL  693 (838)
Q Consensus       615 A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~g~-t~L~~A~~~g~~~iv~~L  693 (838)
                      |+..|+.+++++|++.|++++..+..|+||||+|+..|+.+++++|+++|++++..+..|+ |||++|+..|+.++|++|
T Consensus        68 Aa~~g~~eiV~lLL~~Gadvn~~d~~G~TpLh~Aa~~g~~eivk~Ll~~gadin~~~~~g~~TpL~~Aa~~g~~eivk~L  147 (284)
T PHA02791         68 AATLEDTKIVKILLFSGMDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYF  147 (284)
T ss_pred             HHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccCCCCCcHHHHHHHHcCCHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999999888885 899999999999999999


Q ss_pred             HhCCCCCCCCC-CCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcH-HHHHHHcCCHHHHHHHHHCCCCCccCCC
Q psy3308         694 IEHGATVSHQA-KNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTP-LHIASHFGQLNMVRYLVENGANVNATTN  771 (838)
Q Consensus       694 l~~g~~~~~~~-~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~-l~~A~~~g~~~~v~~Ll~~g~~~~~~~~  771 (838)
                      ++++++.  .+ ..|.||||+|+..|+.+++++|+++|++++.++..|.|| ||+|+..|+.++|++|+++|+++|.+|.
T Consensus       148 L~~~~~~--~d~~~g~TpLh~Aa~~g~~eiv~lLL~~gAd~n~~d~~g~t~~L~~Aa~~~~~e~v~lLl~~Ga~in~~~~  225 (284)
T PHA02791        148 LSEIPST--FDLAILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDLEMLQALFKYDINIYSVNL  225 (284)
T ss_pred             HhcCCcc--cccccCccHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCccCcc
Confidence            9987643  23 358999999999999999999999999999999999987 9999999999999999999999999998


Q ss_pred             CCCcHHHHHHHhCcHHHHHHHHhCCCCCC
Q psy3308         772 LGYTPLHQASQQGRVLIIDLLLGAGAQPN  800 (838)
Q Consensus       772 ~g~t~l~~A~~~~~~~~v~~Ll~~ga~~~  800 (838)
                      .| ++|      ++.|++++|+++-++..
T Consensus       226 ~~-~~l------~~~e~~~~ll~~~~~~~  247 (284)
T PHA02791        226 EN-VLL------DDAEIAKMIIEKHVEYK  247 (284)
T ss_pred             cC-ccC------CCHHHHHHHHHhhhhhc
Confidence            54 555      89999999999877654


No 27 
>PHA02878 ankyrin repeat protein; Provisional
Probab=100.00  E-value=3.9e-37  Score=331.83  Aligned_cols=306  Identities=26%  Similarity=0.311  Sum_probs=260.4

Q ss_pred             CCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCChHHHHHHHhCcHHHHHHHHHCCCCCcccCCCCCcHHHHHHH
Q psy3308         455 RAREDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAK  534 (838)
Q Consensus       455 ~~~~~~~~l~~a~~~~~~~~v~~L~~~~~~~~~~~~~~~~~l~~A~~~~~~e~v~~L~~~~~~~~~~~~~~~~~l~~A~~  534 (838)
                      ....+.+|||.|+..|+.+++++|+++|++++..+..|.||||.|+..|+.+++++|++.+.....  ..+.++++.|+.
T Consensus        33 ~~~~~~tPLh~A~~~g~~e~vk~Ll~~gadvn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~~~~~~~--~~~~~~l~~a~~  110 (477)
T PHA02878         33 ASLIPFIPLHQAVEARNLDVVKSLLTRGHNVNQPDHRDLTPLHIICKEPNKLGMKEMIRSINKCSV--FYTLVAIKDAFN  110 (477)
T ss_pred             ccccCcchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCccHhHHHHHHHHHhcccc--ccchhhHHHHHH
Confidence            344677899999999999999999999999999999999999999999999999999987655443  456789999999


Q ss_pred             cCCHHHHHHHHhCCCCCCCchhHHHHHhhcCCCccccCCCCCcHHHHHHH--cCcHHHHHHHHhCCCCCCCCCCC-CCcH
Q psy3308         535 YGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAK--YGRMKIAQMLLQKDAPVDSQGKN-GVTP  611 (838)
Q Consensus       535 ~g~~~~~~~Ll~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~--~~~~~~v~~Ll~~~~~~~~~~~~-~~~~  611 (838)
                      .++.+++++|+..+.........                   ..+.....  ....+++++|+++|++++..+.. |.||
T Consensus       111 ~~~~ei~~~Ll~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~iv~~Ll~~gadin~~~~~~g~tp  171 (477)
T PHA02878        111 NRNVEIFKIILTNRYKNIQTIDL-------------------VYIDKKSKDDIIEAEITKLLLSYGADINMKDRHKGNTA  171 (477)
T ss_pred             cCCHHHHHHHHhCcccCcccCcH-------------------HHHhhccchhhHHHHHHHHHHHcCCCCCccCCCCCCCH
Confidence            99999999998764322111000                   01111111  12356999999999999999988 9999


Q ss_pred             HHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHc-CcHHHH
Q psy3308         612 LHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQE-GHTDMS  690 (838)
Q Consensus       612 l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~~-g~~~iv  690 (838)
                      ||+|+..|+.+++++|+++|++++..+..|.||||.|+..|+.+++++|+++|++++.++..|.||||+|+.. ++.+++
T Consensus       172 Lh~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in~~d~~g~TpLh~A~~~~~~~~iv  251 (477)
T PHA02878        172 LHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDARDKCGNTPLHISVGYCKDYDIL  251 (477)
T ss_pred             HHHHHhCCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhcCCHHHH
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999976 789999


Q ss_pred             HHHHhCCCCCCCCCC-CCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcC-CHHHHHHHHHC-----C
Q psy3308         691 SLLIEHGATVSHQAK-NGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFG-QLNMVRYLVEN-----G  763 (838)
Q Consensus       691 ~~Ll~~g~~~~~~~~-~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g-~~~~v~~Ll~~-----g  763 (838)
                      ++|+++|++++.++. .|.||||.|  .++.+++++|+++|+++|.+|..|.|||++|+..+ +.+++++|+.+     +
T Consensus       252 ~~Ll~~gadvn~~~~~~g~TpLh~A--~~~~~~v~~Ll~~gadin~~d~~g~TpL~~A~~~~~~~~~~~~li~~~~~~~~  329 (477)
T PHA02878        252 KLLLEHGVDVNAKSYILGLTALHSS--IKSERKLKLLLEYGADINSLNSYKLTPLSSAVKQYLCINIGRILISNICLLKR  329 (477)
T ss_pred             HHHHHcCCCCCccCCCCCCCHHHHH--ccCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHHcCccchHHHHHHHHHHHHh
Confidence            999999999999876 799999999  56789999999999999999999999999999754 57788888765     4


Q ss_pred             CCCccCCCCCCcHHHHHHHh
Q psy3308         764 ANVNATTNLGYTPLHQASQQ  783 (838)
Q Consensus       764 ~~~~~~~~~g~t~l~~A~~~  783 (838)
                      .+++..+..|.++-+.++..
T Consensus       330 ~~~~~~~~~g~~~n~~~i~~  349 (477)
T PHA02878        330 IKPDIKNSEGFIDNMDCITS  349 (477)
T ss_pred             ccCcccCcHHHHHHHHHHhc
Confidence            67888888887766555543


No 28 
>PHA02989 ankyrin repeat protein; Provisional
Probab=100.00  E-value=6.2e-37  Score=330.96  Aligned_cols=284  Identities=22%  Similarity=0.306  Sum_probs=241.3

Q ss_pred             hhcCcHHHHHHHHHCCCCcccCCCCCCcHHHHHHHc--CcHHHHHHHHHCCCCCCccccCCCcHHHHHHHcC------CH
Q psy3308          70 EATGQEEVAKILVDNGATINVQSLNGFTPLYMAAQE--NHDGVVRYLLSKGGNQTLATEHNITPLHVACKWG------KV  141 (838)
Q Consensus        70 ~~~g~~~~v~~l~~~~~~~~~~~~~~~t~l~~A~~~--g~~~~v~~L~~~~~~~~~~~~~~~~~l~~Aa~~g------~~  141 (838)
                      ......++|++|+++|+++|.+ ..|.|+|+.++..  ++.++|++|+++|++++..+ .+.|||+.|+.++      +.
T Consensus        11 ~~~~~~~~v~~LL~~GadvN~~-~~g~t~l~~~~~~~~~~~~iv~~Ll~~GAdvn~~~-~~~tpL~~a~~~~~~~~~~~~   88 (494)
T PHA02989         11 SDTVDKNALEFLLRTGFDVNEE-YRGNSILLLYLKRKDVKIKIVKLLIDNGADVNYKG-YIETPLCAVLRNREITSNKIK   88 (494)
T ss_pred             CCcCcHHHHHHHHHcCCCcccc-cCCCCHHHHHHhcCCCChHHHHHHHHcCCCccCCC-CCCCcHHHHHhccCcchhhHH
Confidence            3468899999999999999998 6788998776554  47899999999999999776 5689999998765      57


Q ss_pred             HHHHHHHHcCCCCccccCCCCcHHHHHHHc---CCHHHHHHHHHcCCCc-cCCCCCCccHHHHHHhC--CcHHHHHHHHh
Q psy3308         142 AMVELLISKGANIEAKTRDGLTPLHCAARS---GHDNVIDILIEKGAAL-YSKTKNGLAPLHMASQG--DHEAATRVLIY  215 (838)
Q Consensus       142 ~iv~~L~~~~~~~~~~~~~~~tal~~A~~~---g~~~iv~~L~~~~~~~-~~~~~~~~~~l~~A~~~--g~~~~v~~L~~  215 (838)
                      ++|++|+++|++++.++..|.|||+.|+.+   |+.++|++|+++|+++ +..+..|.|||++|+..  ++.+++++|++
T Consensus        89 ~iv~~Ll~~Gadin~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~  168 (494)
T PHA02989         89 KIVKLLLKFGADINLKTFNGVSPIVCFIYNSNINNCDMLRFLLSKGINVNDVKNSRGYNLLHMYLESFSVKKDVIKILLS  168 (494)
T ss_pred             HHHHHHHHCCCCCCCCCCCCCcHHHHHHHhcccCcHHHHHHHHHCCCCcccccCCCCCCHHHHHHHhccCCHHHHHHHHH
Confidence            899999999999999999999999988766   6799999999999999 78889999999998754  68999999999


Q ss_pred             CCCCCCc-ccCCCccHHHHHHhc----CCHHHHHHHHHCCCCccccccCCCchHHHHHhhCCccccccChHHHHHHHHhC
Q psy3308         216 HGAGVDE-ITVDYLTALHVASHC----GHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDR  290 (838)
Q Consensus       216 ~~~~~~~-~~~~~~~~l~~A~~~----g~~~iv~~L~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~i~~~Ll~~  290 (838)
                      +|++++. .+..+.|||+.|+..    ++.+++++|+++|++++..+..+.++++.++..+...  .....+++++|+. 
T Consensus       169 ~Gadi~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~~~~~~t~l~~~~~~~~~~--~~~~~~il~~l~~-  245 (494)
T PHA02989        169 FGVNLFEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNIETNNNGSESVLESFLDNNKIL--SKKEFKVLNFILK-  245 (494)
T ss_pred             cCCCccccccccCCChHHHHHhcccccccHHHHHHHHhCCCCccccCCccccHHHHHHHhchhh--cccchHHHHHHHh-
Confidence            9999887 567889999998775    4899999999999999999888899998877654311  1234667776655 


Q ss_pred             CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCC
Q psy3308         291 KADPNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGA  358 (838)
Q Consensus       291 ~~~~~~~~~~~~~~l~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~iv~~Ll~~~~  358 (838)
                      |++++.++..|.||||.|+..|+.+++++|+++|++++..+..|.|||++|+..|+.+++++|++.++
T Consensus       246 ~advn~~d~~G~TpL~~Aa~~~~~~~v~~LL~~Gadin~~d~~G~TpL~~A~~~~~~~iv~~LL~~~p  313 (494)
T PHA02989        246 YIKINKKDKKGFNPLLISAKVDNYEAFNYLLKLGDDIYNVSKDGDTVLTYAIKHGNIDMLNRILQLKP  313 (494)
T ss_pred             CCCCCCCCCCCCCHHHHHHHhcCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCC
Confidence            58888888888888888888888888888888888888888888888888888888888888887643


No 29 
>PHA02791 ankyrin-like protein; Provisional
Probab=100.00  E-value=3.2e-37  Score=298.58  Aligned_cols=217  Identities=18%  Similarity=0.206  Sum_probs=202.0

Q ss_pred             cCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHcCcHHHHHHHHhCC
Q psy3308         585 YGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYN  664 (838)
Q Consensus       585 ~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~  664 (838)
                      .++.+++++|+++|++  .+|..|.||||+|+..|+.+++++|+++|++++..+  +.||||.|+..|+.+++++|+++|
T Consensus         9 ~~~~~~~~~Lis~~a~--~~D~~G~TpLh~Aa~~g~~eiv~~Ll~~ga~~n~~d--~~TpLh~Aa~~g~~eiV~lLL~~G   84 (284)
T PHA02791          9 WKSKQLKSFLSSKDAF--KADVHGHSALYYAIADNNVRLVCTLLNAGALKNLLE--NEFPLHQAATLEDTKIVKILLFSG   84 (284)
T ss_pred             cCHHHHHHHHHhCCCC--CCCCCCCcHHHHHHHcCCHHHHHHHHHCcCCCcCCC--CCCHHHHHHHCCCHHHHHHHHHCC
Confidence            4678999999999885  578899999999999999999999999999988764  689999999999999999999999


Q ss_pred             CCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCC-cHhHHHHhcCCHHHHHHHHhCCCCCCCCC-CCCCc
Q psy3308         665 AKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGL-TPLHLCAQEDKVNVATITMFNGAEIDPVT-KAGFT  742 (838)
Q Consensus       665 ~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~-t~l~~A~~~g~~~i~~~L~~~~~~~~~~~-~~g~t  742 (838)
                      ++++.++..|+||||+|+..|+.+++++|+++|++++.++..|+ ||||+|+..|+.+++++|++++...  .+ ..|+|
T Consensus        85 advn~~d~~G~TpLh~Aa~~g~~eivk~Ll~~gadin~~~~~g~~TpL~~Aa~~g~~eivk~LL~~~~~~--~d~~~g~T  162 (284)
T PHA02791         85 MDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPST--FDLAILLS  162 (284)
T ss_pred             CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccCCCCCcHHHHHHHHcCCHHHHHHHHhcCCcc--cccccCcc
Confidence            99999999999999999999999999999999999999888884 8999999999999999999987543  33 25899


Q ss_pred             HHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcH-HHHHHHhCcHHHHHHHHhCCCCCCCCCCccc
Q psy3308         743 PLHIASHFGQLNMVRYLVENGANVNATTNLGYTP-LHQASQQGRVLIIDLLLGAGAQPNATTNLFC  807 (838)
Q Consensus       743 ~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~-l~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~  807 (838)
                      |||+|+..|+.+++++|+++|+++|.+|..|.|| ||+|+++|+.++|++|+++|++++.+|..+.
T Consensus       163 pLh~Aa~~g~~eiv~lLL~~gAd~n~~d~~g~t~~L~~Aa~~~~~e~v~lLl~~Ga~in~~~~~~~  228 (284)
T PHA02791        163 CIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDLEMLQALFKYDINIYSVNLENV  228 (284)
T ss_pred             HHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCccCcccCc
Confidence            9999999999999999999999999999999987 9999999999999999999999999999664


No 30 
>KOG4412|consensus
Probab=100.00  E-value=7.8e-38  Score=257.96  Aligned_cols=205  Identities=32%  Similarity=0.480  Sum_probs=146.2

Q ss_pred             cHHHHHHHcCcHHHHHHHHhCCC-CCCCCCC-CCCcHHHHHHHcCCHHHHHHHHh-CCCCCCccCCCCChHHHHHHHcCc
Q psy3308         577 TPLHLAAKYGRMKIAQMLLQKDA-PVDSQGK-NGVTPLHVASHYDHQNVALLLLD-RGASPHAVAKNGYTPLHIAAKKNQ  653 (838)
Q Consensus       577 ~~l~~a~~~~~~~~v~~Ll~~~~-~~~~~~~-~~~~~l~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~~~t~L~~A~~~~~  653 (838)
                      ++.+.+++..-..-++-+++... .++.++. +|+||||+||..|+.+|++||++ .+..++..|..|+||||+|+..|+
T Consensus         5 ~~~~~~~~~~~~~kveel~~s~~kSL~~r~dqD~Rt~LHwa~S~g~~eiv~fLlsq~nv~~ddkDdaGWtPlhia~s~g~   84 (226)
T KOG4412|consen    5 SLGKAICENCEEFKVEELIQSDPKSLNARDDQDGRTPLHWACSFGHVEIVYFLLSQPNVKPDDKDDAGWTPLHIAASNGN   84 (226)
T ss_pred             chHHHHHhhchHHHHHHHHhcChhhhhccccccCCceeeeeeecCchhHHHHHHhcCCCCCCCccccCCchhhhhhhcCc
Confidence            34445555554455555555544 4554443 77777777777777777777773 466677777777777777777777


Q ss_pred             HHHHHHHHhC-CCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCC
Q psy3308         654 MDIATTLLEY-NAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAE  732 (838)
Q Consensus       654 ~~iv~~Ll~~-~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~  732 (838)
                      .++|+.|+.+ |+++|..+..|.|+||+|+..|..+|+++|+++|+.++.+|..|.||||.||..|.++++++|+..|+.
T Consensus        85 ~evVk~Ll~r~~advna~tn~G~T~LHyAagK~r~eIaqlLle~ga~i~~kD~~~qtplHRAAavGklkvie~Li~~~a~  164 (226)
T KOG4412|consen   85 DEVVKELLNRSGADVNATTNGGQTCLHYAAGKGRLEIAQLLLEKGALIRIKDKQGQTPLHRAAAVGKLKVIEYLISQGAP  164 (226)
T ss_pred             HHHHHHHhcCCCCCcceecCCCcceehhhhcCChhhHHHHHHhcCCCCcccccccCchhHHHHhccchhhHHHHHhcCCC
Confidence            7777777776 777777777777777777777777777777777777777777777777777777777777777777777


Q ss_pred             CCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHH
Q psy3308         733 IDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQ  782 (838)
Q Consensus       733 ~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~  782 (838)
                      +|.+|..|+||||.|...||.+...+|+++|++++..|++| ||+..|+-
T Consensus       165 ~n~qDk~G~TpL~~al~e~~~d~a~lLV~~gAd~~~edke~-t~~~~a~~  213 (226)
T KOG4412|consen  165 LNTQDKYGFTPLHHALAEGHPDVAVLLVRAGADTDREDKEG-TALRIACN  213 (226)
T ss_pred             CCcccccCccHHHHHHhccCchHHHHHHHhccceeeccccC-chHHHHHH
Confidence            77777777777777776777777777777777777777777 77666553


No 31 
>KOG4412|consensus
Probab=100.00  E-value=9.2e-38  Score=257.54  Aligned_cols=204  Identities=31%  Similarity=0.464  Sum_probs=187.8

Q ss_pred             CcHHHHHHHcCCHHHHHHHHhCCC-CCCccCC-CCChHHHHHHHcCcHHHHHHHH-hCCCCCCCCCCCCCcHHHHHHHcC
Q psy3308         609 VTPLHVASHYDHQNVALLLLDRGA-SPHAVAK-NGYTPLHIAAKKNQMDIATTLL-EYNAKPNAESKAGFTPLHLSAQEG  685 (838)
Q Consensus       609 ~~~l~~A~~~~~~~~v~~Ll~~g~-~~~~~~~-~~~t~L~~A~~~~~~~iv~~Ll-~~~~~~~~~~~~g~t~L~~A~~~g  685 (838)
                      .++.+.++......-++.+++... ..+.++. +|+||||+|+..|+.+||.+|+ +.++.++.+|..||||||.|+..|
T Consensus         4 ~~~~~~~~~~~~~~kveel~~s~~kSL~~r~dqD~Rt~LHwa~S~g~~eiv~fLlsq~nv~~ddkDdaGWtPlhia~s~g   83 (226)
T KOG4412|consen    4 ASLGKAICENCEEFKVEELIQSDPKSLNARDDQDGRTPLHWACSFGHVEIVYFLLSQPNVKPDDKDDAGWTPLHIAASNG   83 (226)
T ss_pred             cchHHHHHhhchHHHHHHHHhcChhhhhccccccCCceeeeeeecCchhHHHHHHhcCCCCCCCccccCCchhhhhhhcC
Confidence            456677777766666777777644 6666665 8999999999999999999999 568889999999999999999999


Q ss_pred             cHHHHHHHHhC-CCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCC
Q psy3308         686 HTDMSSLLIEH-GATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGA  764 (838)
Q Consensus       686 ~~~iv~~Ll~~-g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~  764 (838)
                      +.++|+-|+.+ |+++|..++.|+|+||+|+.+|+++|+.+|+++|+.++.+|..|.||||.|+.-|+++++++|+..|+
T Consensus        84 ~~evVk~Ll~r~~advna~tn~G~T~LHyAagK~r~eIaqlLle~ga~i~~kD~~~qtplHRAAavGklkvie~Li~~~a  163 (226)
T KOG4412|consen   84 NDEVVKELLNRSGADVNATTNGGQTCLHYAAGKGRLEIAQLLLEKGALIRIKDKQGQTPLHRAAAVGKLKVIEYLISQGA  163 (226)
T ss_pred             cHHHHHHHhcCCCCCcceecCCCcceehhhhcCChhhHHHHHHhcCCCCcccccccCchhHHHHhccchhhHHHHHhcCC
Confidence            99999999999 99999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCCCCCCccch-HHHHH
Q psy3308         765 NVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTNLFCC-ATILV  813 (838)
Q Consensus       765 ~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~-~~~~~  813 (838)
                      .+|..|+.|+||||.|...|++++..+|+++||+.+..|+.| | +.++.
T Consensus       164 ~~n~qDk~G~TpL~~al~e~~~d~a~lLV~~gAd~~~edke~-t~~~~a~  212 (226)
T KOG4412|consen  164 PLNTQDKYGFTPLHHALAEGHPDVAVLLVRAGADTDREDKEG-TALRIAC  212 (226)
T ss_pred             CCCcccccCccHHHHHHhccCchHHHHHHHhccceeeccccC-chHHHHH
Confidence            999999999999999999999999999999999999999999 7 66554


No 32 
>PHA02792 ankyrin-like protein; Provisional
Probab=100.00  E-value=1.7e-35  Score=306.74  Aligned_cols=217  Identities=20%  Similarity=0.138  Sum_probs=149.0

Q ss_pred             HHHHHHcCCHHH--HHHHHHcCCCCccccCCCCcHHHHHHHcCCHH-HHHHHHHcCCCccCCCCCCccHHHH-HHhCCcH
Q psy3308         132 LHVACKWGKVAM--VELLISKGANIEAKTRDGLTPLHCAARSGHDN-VIDILIEKGAALYSKTKNGLAPLHM-ASQGDHE  207 (838)
Q Consensus       132 l~~Aa~~g~~~i--v~~L~~~~~~~~~~~~~~~tal~~A~~~g~~~-iv~~L~~~~~~~~~~~~~~~~~l~~-A~~~g~~  207 (838)
                      |.-.|+.=+++.  .+.|++.|+++-. ..++.|||+.-..+.|.- =++.++..+...+....++.+++++ |+.+|++
T Consensus         7 ~~~~~~~~~~~~~~~~~l~~~g~~~~~-~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~s~n~~l   85 (631)
T PHA02792          7 LYDSCKTFNIDACSAQSLIESGANPLY-EYDGETPLKAYVTKKNNNIKNDVVILLLSSVDYKNINDFDIFEYLCSDNIDI   85 (631)
T ss_pred             HHhHhhccchhHHHHHHHHHcCCCccc-ccCCCccHHHHHhhhhhhHHHHHHHHHHhCCCcCccCCccHHHHHHHhcccH
Confidence            333444443433  3567788877765 466778887776555522 2333333344444556667777766 5667888


Q ss_pred             HHHHHHHhCCCCCCcccCCCccHHHHHHh-cCCHHHHHHHHHCCCCccccccCCCchHHHHHhhCCccccccChHHHHHH
Q psy3308         208 AATRVLIYHGAGVDEITVDYLTALHVASH-CGHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKT  286 (838)
Q Consensus       208 ~~v~~L~~~~~~~~~~~~~~~~~l~~A~~-~g~~~iv~~L~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~i~~~  286 (838)
                      |+|++|+.+|++++..+..+.+++++|+. .|+.|++++|+++|+++...+..|.+|++.-+....+--       .-..
T Consensus        86 Elvk~LI~~GAdvN~~~n~~~~~l~ya~~~~~~~eivk~Ll~~Gad~~~~~~~g~~~~~~~~~~~~~~~-------~~~~  158 (631)
T PHA02792         86 ELLKLLISKGLEINSIKNGINIVEKYATTSNPNVDVFKLLLDKGIPTCSNIQYGYKIIIEQITRAEYYN-------WDDE  158 (631)
T ss_pred             HHHHHHHHcCCCcccccCCCCcceeEeecCCCChHHHHHHHHCCCCcccccccCcchhhhhcccccccc-------hhhh
Confidence            88888888888888777777788888855 688888888888888887777888888876665432210       0000


Q ss_pred             HH--hCCCCCCCCCCCCCcHHHHHHHcC-------CHHHHHHHHhCCCCccccCCCCCcHHHHHHHcC--CHHHHHHHHH
Q psy3308         287 LL--DRKADPNARALNGFTPLHIACKKN-------RYKVVELLLKYGASIAATTESGLTPLHVASFMG--CMNIAIFLLQ  355 (838)
Q Consensus       287 Ll--~~~~~~~~~~~~~~~~l~~A~~~g-------~~~~v~~L~~~~~~~~~~~~~~~~~l~~A~~~g--~~~iv~~Ll~  355 (838)
                      +-  +.+-..+..+..|.||||.|+.++       +.|+++.|+.+|++++..+..|.||||+|+.+.  +.|+++.|++
T Consensus       159 ~~~~~~~~~i~~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~~~~~d~~g~t~l~~~~~~~~i~~ei~~~L~~  238 (631)
T PHA02792        159 LDDYDYDYTTDYDDRMGKTVLYYYIITRSQDGYATSLDVINYLISHEKEMRYYTYREHTTLYYYVDKCDIKREIFDALFD  238 (631)
T ss_pred             ccccccccccccCCCCCCchHHHHHhhCCcccccCCHHHHHHHHhCCCCcCccCCCCChHHHHHHHcccchHHHHHHHHh
Confidence            00  123344566777888888888888       788888888888888888888888888888888  7888888876


Q ss_pred             c
Q psy3308         356 A  356 (838)
Q Consensus       356 ~  356 (838)
                      .
T Consensus       239 ~  239 (631)
T PHA02792        239 S  239 (631)
T ss_pred             c
Confidence            3


No 33 
>PHA02875 ankyrin repeat protein; Provisional
Probab=100.00  E-value=4.2e-36  Score=319.23  Aligned_cols=240  Identities=25%  Similarity=0.359  Sum_probs=225.9

Q ss_pred             CcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHcCcHH
Q psy3308         576 FTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMD  655 (838)
Q Consensus       576 ~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~  655 (838)
                      +++|+.|+..|+.+++++|++.|++++..+..|.||||+|+..++.+++++|+++|++++..+..+.||||.|+..|+.+
T Consensus         3 ~~~L~~A~~~g~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~t~L~~A~~~g~~~   82 (413)
T PHA02875          3 QVALCDAILFGELDIARRLLDIGINPNFEIYDGISPIKLAMKFRDSEAIKLLMKHGAIPDVKYPDIESELHDAVEEGDVK   82 (413)
T ss_pred             chHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCccccCCCcccHHHHHHHCCCHH
Confidence            58999999999999999999999999999999999999999999999999999999999988889999999999999999


Q ss_pred             HHHHHHhCCCCCC-CCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCC
Q psy3308         656 IATTLLEYNAKPN-AESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEID  734 (838)
Q Consensus       656 iv~~Ll~~~~~~~-~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~  734 (838)
                      ++++|++.|...+ ..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++
T Consensus        83 ~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~gad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~~  162 (413)
T PHA02875         83 AVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLD  162 (413)
T ss_pred             HHHHHHHcCCcccccccCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCC
Confidence            9999999987654 446679999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCC-CcHHHHHHHhCcHHHHHHHHhCCCCCCCC---CCccch-H
Q psy3308         735 PVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLG-YTPLHQASQQGRVLIIDLLLGAGAQPNAT---TNLFCC-A  809 (838)
Q Consensus       735 ~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g-~t~l~~A~~~~~~~~v~~Ll~~ga~~~~~---~~~~~~-~  809 (838)
                      .+|..|+||||+|+..|+.+++++|+++|++++..+..| .||+++|+..|+.++|++|+++|+|++..   +..+.| +
T Consensus       163 ~~d~~g~TpL~~A~~~g~~eiv~~Ll~~ga~~n~~~~~~~~t~l~~A~~~~~~~iv~~Ll~~gad~n~~~~~~~~~~t~l  242 (413)
T PHA02875        163 IEDCCGCTPLIIAMAKGDIAICKMLLDSGANIDYFGKNGCVAALCYAIENNKIDIVRLFIKRGADCNIMFMIEGEECTIL  242 (413)
T ss_pred             CCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHHCCcCcchHhhcCCCchHHH
Confidence            999999999999999999999999999999999999877 58999999999999999999999999986   566777 7


Q ss_pred             HHHHHc
Q psy3308         810 TILVKN  815 (838)
Q Consensus       810 ~~~~~~  815 (838)
                      +++...
T Consensus       243 ~~~~~~  248 (413)
T PHA02875        243 DMICNM  248 (413)
T ss_pred             HHHHhh
Confidence            766543


No 34 
>PHA02798 ankyrin-like protein; Provisional
Probab=100.00  E-value=1.8e-35  Score=319.11  Aligned_cols=284  Identities=20%  Similarity=0.328  Sum_probs=229.5

Q ss_pred             CHHHHHHHHhCCCCCCCCCCCCChHHHHHH--HhCcHHHHHHHHHCCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q psy3308         471 NGDIASLLLQHGASVDAPTKDGYTALHISA--KEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKD  548 (838)
Q Consensus       471 ~~~~v~~L~~~~~~~~~~~~~~~~~l~~A~--~~~~~e~v~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~~~~~Ll~~~  548 (838)
                      ..+.|+.|++.+ +++.. ..+.++++.+.  ..++.+++++|+++|++++..+..|.|||+.++..             
T Consensus        17 ~~~~v~~ll~~~-~~~~~-~~~~~~~~~yl~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpL~~~~~n-------------   81 (489)
T PHA02798         17 KLSTVKLLIKSC-NPNEI-VNEYSIFQKYLQRDSPSTDIVKLFINLGANVNGLDNEYSTPLCTILSN-------------   81 (489)
T ss_pred             cHHHHHHHHhcC-Chhhh-cccchHHHHHHhCCCCCHHHHHHHHHCCCCCCCCCCCCCChHHHHHHh-------------
Confidence            445666666543 22222 23444444332  23356666666666666666666666666654431             


Q ss_pred             CCCCCchhHHHHHhhcCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcC---CHHHHH
Q psy3308         549 APVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYD---HQNVAL  625 (838)
Q Consensus       549 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~A~~~~---~~~~v~  625 (838)
                                                      .+...++.+++++|+++|+++|.++..|.||||+|+..+   +.++++
T Consensus        82 --------------------------------~~~~~~~~~iv~~Ll~~GadiN~~d~~G~TpLh~a~~~~~~~~~~iv~  129 (489)
T PHA02798         82 --------------------------------IKDYKHMLDIVKILIENGADINKKNSDGETPLYCLLSNGYINNLEILL  129 (489)
T ss_pred             --------------------------------HHhHHhHHHHHHHHHHCCCCCCCCCCCcCcHHHHHHHcCCcChHHHHH
Confidence                                            001124589999999999999999999999999999875   789999


Q ss_pred             HHHhCCCCCCccCCCCChHHHHHHHcCc---HHHHHHHHhCCCCCCCCC-CCCCcHHHHHHHc----CcHHHHHHHHhCC
Q psy3308         626 LLLDRGASPHAVAKNGYTPLHIAAKKNQ---MDIATTLLEYNAKPNAES-KAGFTPLHLSAQE----GHTDMSSLLIEHG  697 (838)
Q Consensus       626 ~Ll~~g~~~~~~~~~~~t~L~~A~~~~~---~~iv~~Ll~~~~~~~~~~-~~g~t~L~~A~~~----g~~~iv~~Ll~~g  697 (838)
                      +|+++|++++..+..|.||||.|++.++   .+++++|++.|++++..+ ..|.||||.++..    ++.+++++|+++|
T Consensus       130 ~Ll~~Gadvn~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gadin~~~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~G  209 (489)
T PHA02798        130 FMIENGADTTLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEKGVDINTHNNKEKYDTLHCYFKYNIDRIDADILKLFVDNG  209 (489)
T ss_pred             HHHHcCCCccccCCCCCcHHHHHHHcCCcchHHHHHHHHHhCCCcccccCcCCCcHHHHHHHhccccCCHHHHHHHHHCC
Confidence            9999999999999999999999999987   999999999999998875 4688999988764    4799999999999


Q ss_pred             CCCCCCCCCCCcHhH-------HHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCC
Q psy3308         698 ATVSHQAKNGLTPLH-------LCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATT  770 (838)
Q Consensus       698 ~~~~~~~~~~~t~l~-------~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~  770 (838)
                      ++++..+..+.++++       .+...++.+++++|+. ++++|.+|..|+||||+|+..|+.+++++|+++|+++|..|
T Consensus       210 a~i~~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~-~~dvN~~d~~G~TPL~~A~~~~~~~~v~~LL~~GAdin~~d  288 (489)
T PHA02798        210 FIINKENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFS-YIDINQVDELGFNPLYYSVSHNNRKIFEYLLQLGGDINIIT  288 (489)
T ss_pred             CCcccCCccccchHHHHHHHHHhhcccchHHHHHHHHh-cCCCCCcCcCCccHHHHHHHcCcHHHHHHHHHcCCcccccC
Confidence            999998888888876       2445667788888765 69999999999999999999999999999999999999999


Q ss_pred             CCCCcHHHHHHHhCcHHHHHHHHhCCCCCCCC
Q psy3308         771 NLGYTPLHQASQQGRVLIIDLLLGAGAQPNAT  802 (838)
Q Consensus       771 ~~g~t~l~~A~~~~~~~~v~~Ll~~ga~~~~~  802 (838)
                      ..|+|||++|+++++.++++.|+++|++++..
T Consensus       289 ~~G~TpL~~A~~~~~~~iv~~lL~~~~~~~~i  320 (489)
T PHA02798        289 ELGNTCLFTAFENESKFIFNSILNKKPNKNTI  320 (489)
T ss_pred             CCCCcHHHHHHHcCcHHHHHHHHccCCCHHHH
Confidence            99999999999999999999999999998754


No 35 
>PHA02798 ankyrin-like protein; Provisional
Probab=100.00  E-value=1e-34  Score=313.31  Aligned_cols=288  Identities=22%  Similarity=0.250  Sum_probs=234.5

Q ss_pred             cCcHHHHHHHHHCCCCcccCCCCCCcHHHHHHH--cCcHHHHHHHHHCCCCCCccccCCCcHHHHHHHc-----CCHHHH
Q psy3308          72 TGQEEVAKILVDNGATINVQSLNGFTPLYMAAQ--ENHDGVVRYLLSKGGNQTLATEHNITPLHVACKW-----GKVAMV  144 (838)
Q Consensus        72 ~g~~~~v~~l~~~~~~~~~~~~~~~t~l~~A~~--~g~~~~v~~L~~~~~~~~~~~~~~~~~l~~Aa~~-----g~~~iv  144 (838)
                      +-..+.|+.|++.+ +++.. ..+.|+++.+..  .++.++|++|+++|++++..+..|.|||+.|+.+     ++.++|
T Consensus        15 ~~~~~~v~~ll~~~-~~~~~-~~~~~~~~~yl~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpL~~~~~n~~~~~~~~~iv   92 (489)
T PHA02798         15 NVKLSTVKLLIKSC-NPNEI-VNEYSIFQKYLQRDSPSTDIVKLFINLGANVNGLDNEYSTPLCTILSNIKDYKHMLDIV   92 (489)
T ss_pred             cccHHHHHHHHhcC-Chhhh-cccchHHHHHHhCCCCCHHHHHHHHHCCCCCCCCCCCCCChHHHHHHhHHhHHhHHHHH
Confidence            44677889998765 33433 345666664443  4578999999999999998999999999988865     678999


Q ss_pred             HHHHHcCCCCccccCCCCcHHHHHHHcC---CHHHHHHHHHcCCCccCCCCCCccHHHHHHhCCc---HHHHHHHHhCCC
Q psy3308         145 ELLISKGANIEAKTRDGLTPLHCAARSG---HDNVIDILIEKGAALYSKTKNGLAPLHMASQGDH---EAATRVLIYHGA  218 (838)
Q Consensus       145 ~~L~~~~~~~~~~~~~~~tal~~A~~~g---~~~iv~~L~~~~~~~~~~~~~~~~~l~~A~~~g~---~~~v~~L~~~~~  218 (838)
                      ++|+++|++++..+..|.||||+|+.+|   +.+++++|+++|++++..+..|.|||++|++.|+   .+++++|+++|+
T Consensus        93 ~~Ll~~GadiN~~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~ga  172 (489)
T PHA02798         93 KILIENGADINKKNSDGETPLYCLLSNGYINNLEILLFMIENGADTTLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEKGV  172 (489)
T ss_pred             HHHHHCCCCCCCCCCCcCcHHHHHHHcCCcChHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCcchHHHHHHHHHhCC
Confidence            9999999999999999999999999876   6889999999999999889999999999999887   899999999998


Q ss_pred             CCCccc-CCCccHHHHHHhc----CCHHHHHHHHHCCCCccccccCCCchHHHHHhhCCccccccChHHHHHHHHhCCCC
Q psy3308         219 GVDEIT-VDYLTALHVASHC----GHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKAD  293 (838)
Q Consensus       219 ~~~~~~-~~~~~~l~~A~~~----g~~~iv~~L~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~i~~~Ll~~~~~  293 (838)
                      +++..+ ..+.||||.++..    ++.+++++|+++|++++..+..+.++++.....-.. .......+++++|+. +++
T Consensus       173 din~~~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~Ga~i~~~~~~~~~~~~~~l~~l~~-~~~~~~~~i~~~l~~-~~d  250 (489)
T PHA02798        173 DINTHNNKEKYDTLHCYFKYNIDRIDADILKLFVDNGFIINKENKSHKKKFMEYLNSLLY-DNKRFKKNILDFIFS-YID  250 (489)
T ss_pred             CcccccCcCCCcHHHHHHHhccccCCHHHHHHHHHCCCCcccCCccccchHHHHHHHHHh-hcccchHHHHHHHHh-cCC
Confidence            887664 4577899988664    589999999999999998888888876621110000 001125667877765 589


Q ss_pred             CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCC
Q psy3308         294 PNARALNGFTPLHIACKKNRYKVVELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTA  363 (838)
Q Consensus       294 ~~~~~~~~~~~l~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~iv~~Ll~~~~~~~~~  363 (838)
                      ++.++..|.||||.|+..|+.+++++|+++|++++..+..|.|||+.|+.+|+.++++.|++.+++++..
T Consensus       251 vN~~d~~G~TPL~~A~~~~~~~~v~~LL~~GAdin~~d~~G~TpL~~A~~~~~~~iv~~lL~~~~~~~~i  320 (489)
T PHA02798        251 INQVDELGFNPLYYSVSHNNRKIFEYLLQLGGDINIITELGNTCLFTAFENESKFIFNSILNKKPNKNTI  320 (489)
T ss_pred             CCCcCcCCccHHHHHHHcCcHHHHHHHHHcCCcccccCCCCCcHHHHHHHcCcHHHHHHHHccCCCHHHH
Confidence            9999999999999999999999999999999999999999999999999999999999999988877643


No 36 
>KOG4369|consensus
Probab=100.00  E-value=1.3e-35  Score=308.29  Aligned_cols=322  Identities=27%  Similarity=0.348  Sum_probs=295.1

Q ss_pred             CCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCChHHHHHHHhCcHHHHHHHHHCCCCCcc-cCCCCCcHHHHHHHc
Q psy3308         457 REDQTPLHVASRLGNGDIASLLLQHGASVDAPTKDGYTALHISAKEGQDEVASILTESGASITA-TTKKGFTPLHLAAKY  535 (838)
Q Consensus       457 ~~~~~~l~~a~~~~~~~~v~~L~~~~~~~~~~~~~~~~~l~~A~~~~~~e~v~~L~~~~~~~~~-~~~~~~~~l~~A~~~  535 (838)
                      ..-.++|..||..|+.|+++.|+.+|+++.-.|..|.++|..|+..|+..+|+.|+..-++++. .|..+.|+|.+||..
T Consensus       755 ~n~~t~LT~acaggh~e~vellv~rganiehrdkkgf~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~lSlacsg  834 (2131)
T KOG4369|consen  755 PNIKTNLTSACAGGHREEVELLVVRGANIEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLSLACSG  834 (2131)
T ss_pred             ccccccccccccCccHHHHHHHHHhcccccccccccchhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceEEEecCC
Confidence            3456889999999999999999999999999999999999999999999999999998888775 456678999999999


Q ss_pred             CCHHHHHHHHhCCCCCCCchhHHHHHhhcCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCC--CCCCcHHH
Q psy3308         536 GRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQG--KNGVTPLH  613 (838)
Q Consensus       536 g~~~~~~~Ll~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~--~~~~~~l~  613 (838)
                      |+.++++.|+..+.....                 ++....|||.+|...|..++|+.|+..|..||.+.  +.|..||+
T Consensus       835 gr~~vvelLl~~gankeh-----------------rnvsDytPlsla~Sggy~~iI~~llS~GseInSrtgSklgisPLm  897 (2131)
T KOG4369|consen  835 GRTRVVELLLNAGANKEH-----------------RNVSDYTPLSLARSGGYTKIIHALLSSGSEINSRTGSKLGISPLM  897 (2131)
T ss_pred             CcchHHHHHHHhhccccc-----------------cchhhcCchhhhcCcchHHHHHHHhhcccccccccccccCcchhh
Confidence            999999999998765433                 34455799999999999999999999999999875  57889999


Q ss_pred             HHHHcCCHHHHHHHHhCCCCCCccC-CCCChHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCcHHHHHH
Q psy3308         614 VASHYDHQNVALLLLDRGASPHAVA-KNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSL  692 (838)
Q Consensus       614 ~A~~~~~~~~v~~Ll~~g~~~~~~~-~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~  692 (838)
                      +|..+|+...++.|++.|.++|..- .+.+|+|-.|+-.|+.++|..||.+.+++..+-..|-|||+.++..|..|+=.+
T Consensus       898 latmngh~~at~~ll~~gsdiNaqIeTNrnTaltla~fqgr~evv~lLLa~~anvehRaktgltplme~AsgGyvdvg~~  977 (2131)
T KOG4369|consen  898 LATMNGHQAATLSLLQPGSDINAQIETNRNTALTLALFQGRPEVVFLLLAAQANVEHRAKTGLTPLMEMASGGYVDVGNL  977 (2131)
T ss_pred             hhhhccccHHHHHHhcccchhccccccccccceeeccccCcchHHHHHHHHhhhhhhhcccCCcccchhhcCCccccchh
Confidence            9999999999999999999998643 456799999999999999999999999999999999999999999999999999


Q ss_pred             HHhCCCCCCCCC--CCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCC
Q psy3308         693 LIEHGATVSHQA--KNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATT  770 (838)
Q Consensus       693 Ll~~g~~~~~~~--~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~  770 (838)
                      |+..|+|+|..-  ....|+|..++..||...++.|+...+.++.++..|.|+|..|+..|++..+..|+++++|++..|
T Consensus       978 li~~gad~nasPvp~T~dtalti~a~kGh~kfv~~lln~~atv~v~NkkG~T~Lwla~~Gg~lss~~il~~~~ad~d~qd 1057 (2131)
T KOG4369|consen  978 LIAAGADTNASPVPNTWDTALTIPANKGHTKFVPKLLNGDATVRVPNKKGCTVLWLASAGGALSSCPILVSSVADADQQD 1057 (2131)
T ss_pred             hhhcccccccCCCCCcCCccceeecCCCchhhhHHhhCCccceecccCCCCcccchhccCCccccchHHhhcccChhhhh
Confidence            999999998653  456789999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCcHHHHHHHhCcHHHHHHHHhC
Q psy3308         771 NLGYTPLHQASQQGRVLIIDLLLGA  795 (838)
Q Consensus       771 ~~g~t~l~~A~~~~~~~~v~~Ll~~  795 (838)
                      +...++++.|.|.||++||++.+..
T Consensus      1058 nr~~S~~maafRKgh~~iVk~mv~~ 1082 (2131)
T KOG4369|consen 1058 NRTNSRTMAAFRKGHFAIVKKMVPP 1082 (2131)
T ss_pred             cccccccHHHHHhchhheeccccCc
Confidence            9999999999999999999998865


No 37 
>PHA02875 ankyrin repeat protein; Provisional
Probab=100.00  E-value=5.3e-34  Score=303.11  Aligned_cols=251  Identities=27%  Similarity=0.364  Sum_probs=228.9

Q ss_pred             CcHHHHHHHcCCHHHHHHHHhCCCCCCCchhHHHHHhhcCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCC
Q psy3308         526 FTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQG  605 (838)
Q Consensus       526 ~~~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~  605 (838)
                      +++|+.|+..|+.+++++|++.+.+                 ++..+..|.||||.|+..++.+++++|+++|++++..+
T Consensus         3 ~~~L~~A~~~g~~~iv~~Ll~~g~~-----------------~n~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~   65 (413)
T PHA02875          3 QVALCDAILFGELDIARRLLDIGIN-----------------PNFEIYDGISPIKLAMKFRDSEAIKLLMKHGAIPDVKY   65 (413)
T ss_pred             chHHHHHHHhCCHHHHHHHHHCCCC-----------------CCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCccccC
Confidence            5789999999999999999987654                 45566789999999999999999999999999999888


Q ss_pred             CCCCcHHHHHHHcCCHHHHHHHHhCCCCCC-ccCCCCChHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHc
Q psy3308         606 KNGVTPLHVASHYDHQNVALLLLDRGASPH-AVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQE  684 (838)
Q Consensus       606 ~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~~  684 (838)
                      ..+.+|||.|+..|+.+++++|++.|...+ ..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..
T Consensus        66 ~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~gad~~~~~~~g~tpLh~A~~~  145 (413)
T PHA02875         66 PDIESELHDAVEEGDVKAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMM  145 (413)
T ss_pred             CCcccHHHHHHHCCCHHHHHHHHHcCCcccccccCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHc
Confidence            899999999999999999999999998764 3456799999999999999999999999999999999999999999999


Q ss_pred             CcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCC-cHHHHHHHcCCHHHHHHHHHCC
Q psy3308         685 GHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGF-TPLHIASHFGQLNMVRYLVENG  763 (838)
Q Consensus       685 g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~-t~l~~A~~~g~~~~v~~Ll~~g  763 (838)
                      |+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++..+..|. ||+++|+..|+.+++++|+++|
T Consensus       146 ~~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~g~~eiv~~Ll~~ga~~n~~~~~~~~t~l~~A~~~~~~~iv~~Ll~~g  225 (413)
T PHA02875        146 GDIKGIELLIDHKACLDIEDCCGCTPLIIAMAKGDIAICKMLLDSGANIDYFGKNGCVAALCYAIENNKIDIVRLFIKRG  225 (413)
T ss_pred             CCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHHCC
Confidence            999999999999999999999999999999999999999999999999999988875 7899999999999999999999


Q ss_pred             CCCccC---CCCCCcHHHHHHHh---CcHHHHHHHH
Q psy3308         764 ANVNAT---TNLGYTPLHQASQQ---GRVLIIDLLL  793 (838)
Q Consensus       764 ~~~~~~---~~~g~t~l~~A~~~---~~~~~v~~Ll  793 (838)
                      +++|..   +..+.||++.++..   ...+.++.++
T Consensus       226 ad~n~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~li  261 (413)
T PHA02875        226 ADCNIMFMIEGEECTILDMICNMCTNLESEAIDALI  261 (413)
T ss_pred             cCcchHhhcCCCchHHHHHHHhhcCCcccHHHHHHH
Confidence            999875   56789999988743   3455565555


No 38 
>KOG4369|consensus
Probab=100.00  E-value=2.3e-34  Score=299.14  Aligned_cols=319  Identities=28%  Similarity=0.355  Sum_probs=291.0

Q ss_pred             CChHHHHHHHhCcHHHHHHHHHCCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCchhHHHHHhhcCCCcccc
Q psy3308         492 GYTALHISAKEGQDEVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITAT  571 (838)
Q Consensus       492 ~~~~l~~A~~~~~~e~v~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~l~~~~~~~~~~  571 (838)
                      -.|+|..||..|+.|++++|+..|+++..+|+.|.+|+.+|+..|+..+|+.|++...+++.+                .
T Consensus       757 ~~t~LT~acaggh~e~vellv~rganiehrdkkgf~plImaatagh~tvV~~llk~ha~veaQ----------------s  820 (2131)
T KOG4369|consen  757 IKTNLTSACAGGHREEVELLVVRGANIEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQ----------------S  820 (2131)
T ss_pred             ccccccccccCccHHHHHHHHHhcccccccccccchhhhhhcccCchHHHHHHHhhhhhhhhh----------------c
Confidence            457999999999999999999999999999999999999999999999999999987766543                5


Q ss_pred             CCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccCC--CCChHHHHHH
Q psy3308         572 TKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAK--NGYTPLHIAA  649 (838)
Q Consensus       572 ~~~~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~--~~~t~L~~A~  649 (838)
                      |+.+.|+|..|+..|+.++|+.|+..|++-..++...+|||.+|...|..+++..|+..|.++|.+..  .|-.||+.|.
T Consensus       821 drtkdt~lSlacsggr~~vvelLl~~gankehrnvsDytPlsla~Sggy~~iI~~llS~GseInSrtgSklgisPLmlat  900 (2131)
T KOG4369|consen  821 DRTKDTMLSLACSGGRTRVVELLLNAGANKEHRNVSDYTPLSLARSGGYTKIIHALLSSGSEINSRTGSKLGISPLMLAT  900 (2131)
T ss_pred             ccccCceEEEecCCCcchHHHHHHHhhccccccchhhcCchhhhcCcchHHHHHHHhhcccccccccccccCcchhhhhh
Confidence            66778999999999999999999999999888888889999999999999999999999988887654  5889999999


Q ss_pred             HcCcHHHHHHHHhCCCCCCCC-CCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHh
Q psy3308         650 KKNQMDIATTLLEYNAKPNAE-SKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMF  728 (838)
Q Consensus       650 ~~~~~~iv~~Ll~~~~~~~~~-~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~  728 (838)
                      ..|+.+.++.|++.|.|+|.. .....|+|-.|...|+.++|.+|+...+++..+-+.|.|||+.+|..|.+++=.+|+.
T Consensus       901 mngh~~at~~ll~~gsdiNaqIeTNrnTaltla~fqgr~evv~lLLa~~anvehRaktgltplme~AsgGyvdvg~~li~  980 (2131)
T KOG4369|consen  901 MNGHQAATLSLLQPGSDINAQIETNRNTALTLALFQGRPEVVFLLLAAQANVEHRAKTGLTPLMEMASGGYVDVGNLLIA  980 (2131)
T ss_pred             hccccHHHHHHhcccchhccccccccccceeeccccCcchHHHHHHHHhhhhhhhcccCCcccchhhcCCccccchhhhh
Confidence            999999999999999888754 2345699999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCC--CCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCCCCCCcc
Q psy3308         729 NGAEIDPV--TKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTNLF  806 (838)
Q Consensus       729 ~~~~~~~~--~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~  806 (838)
                      .|+|.|..  .....|+|..++..||...|..|++..+.+..+++.|.|+|.+|+..|++..+.+|+++++|++..|+.-
T Consensus       981 ~gad~nasPvp~T~dtalti~a~kGh~kfv~~lln~~atv~v~NkkG~T~Lwla~~Gg~lss~~il~~~~ad~d~qdnr~ 1060 (2131)
T KOG4369|consen  981 AGADTNASPVPNTWDTALTIPANKGHTKFVPKLLNGDATVRVPNKKGCTVLWLASAGGALSSCPILVSSVADADQQDNRT 1060 (2131)
T ss_pred             cccccccCCCCCcCCccceeecCCCchhhhHHhhCCccceecccCCCCcccchhccCCccccchHHhhcccChhhhhccc
Confidence            99998753  3334589999999999999999999999999999999999999999999999999999999999999988


Q ss_pred             ch-HHHHHHcCCccCccccccc
Q psy3308         807 CC-ATILVKNGAEIDPVTKLSD  827 (838)
Q Consensus       807 ~~-~~~~~~~~~~~~~~~~~~~  827 (838)
                      .+ ++-|.++|+ +.+|+++..
T Consensus      1061 ~S~~maafRKgh-~~iVk~mv~ 1081 (2131)
T KOG4369|consen 1061 NSRTMAAFRKGH-FAIVKKMVP 1081 (2131)
T ss_pred             ccccHHHHHhch-hheeccccC
Confidence            88 666666666 799988754


No 39 
>KOG0509|consensus
Probab=100.00  E-value=2.4e-32  Score=273.29  Aligned_cols=207  Identities=33%  Similarity=0.498  Sum_probs=119.3

Q ss_pred             cHHHHHHHcCcHHHHHHHHhC-CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccC-CCCChHHHHHHHcCcH
Q psy3308         577 TPLHLAAKYGRMKIAQMLLQK-DAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVA-KNGYTPLHIAAKKNQM  654 (838)
Q Consensus       577 ~~l~~a~~~~~~~~v~~Ll~~-~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~-~~~~t~L~~A~~~~~~  654 (838)
                      ..+..|++.|.++-|+.|++. |.+++..|.+|.++||+|+.+++.+++++|+++|+++|... .-+.||||+|+++|++
T Consensus        46 ~~~v~A~q~G~l~~v~~lve~~g~~v~~~D~~g~tlLHWAAiNNrl~v~r~li~~gadvn~~gG~l~stPLHWAar~G~~  125 (600)
T KOG0509|consen   46 DDIVKATQYGELETVKELVESEGESVNNPDREGVTLLHWAAINNRLDVARYLISHGADVNAIGGVLGSTPLHWAARNGHI  125 (600)
T ss_pred             hhhhhHhhcchHHHHHHHHhhcCcCCCCCCcCCccceeHHHHcCcHHHHHHHHHcCCCccccCCCCCCCcchHHHHcCcH
Confidence            345555555666666666555 55555555555666666666666666666666666655555 2345555555555555


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCC
Q psy3308         655 DIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEID  734 (838)
Q Consensus       655 ~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~  734 (838)
                      .+|++|+++|++++.+|..|.+|||.|++.|+.-+|-+|+.+|++++.+|.+|+||||+|+.+|+...++.|+.-++.++
T Consensus       126 ~vv~lLlqhGAdpt~~D~~G~~~lHla~~~~~~~~vayll~~~~d~d~~D~~grTpLmwAaykg~~~~v~~LL~f~a~~~  205 (600)
T KOG0509|consen  126 SVVDLLLQHGADPTLKDKQGLTPLHLAAQFGHTALVAYLLSKGADIDLRDNNGRTPLMWAAYKGFALFVRRLLKFGASLL  205 (600)
T ss_pred             HHHHHHHHcCCCCceecCCCCcHHHHHHHhCchHHHHHHHHhcccCCCcCCCCCCHHHHHHHhcccHHHHHHHHhccccc
Confidence            55555555555555555555555555555555555555555555555555555555555555555555555555555555


Q ss_pred             CCC-CCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHh
Q psy3308         735 PVT-KAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQ  783 (838)
Q Consensus       735 ~~~-~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~  783 (838)
                      ..| .+|.||||+|+..|+..++++|++.|++.+..|.+|.||+.+|.+.
T Consensus       206 ~~d~~~g~TpLHwa~~~gN~~~v~Ll~~g~~~~d~~~~~g~tp~~LA~~~  255 (600)
T KOG0509|consen  206 LTDDNHGNTPLHWAVVGGNLTAVKLLLEGGADLDKTNTNGKTPFDLAQER  255 (600)
T ss_pred             ccccccCCchHHHHHhcCCcceEehhhhcCCcccccccCCCCHHHHHHHh
Confidence            554 5555555555555555555544444555555555555555555544


No 40 
>KOG0509|consensus
Probab=99.98  E-value=1.3e-31  Score=268.09  Aligned_cols=207  Identities=34%  Similarity=0.443  Sum_probs=198.7

Q ss_pred             CcHHHHHHHcCCHHHHHHHHhC-CCCCCccCCCCChHHHHHHHcCcHHHHHHHHhCCCCCCCCC-CCCCcHHHHHHHcCc
Q psy3308         609 VTPLHVASHYDHQNVALLLLDR-GASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAES-KAGFTPLHLSAQEGH  686 (838)
Q Consensus       609 ~~~l~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~-~~g~t~L~~A~~~g~  686 (838)
                      ..-+..|++.|..+.++.|++. |.+++..|.+|.|+||+|+.+++++++++|+++|+++|... .-+.||||+|+++|+
T Consensus        45 ~~~~v~A~q~G~l~~v~~lve~~g~~v~~~D~~g~tlLHWAAiNNrl~v~r~li~~gadvn~~gG~l~stPLHWAar~G~  124 (600)
T KOG0509|consen   45 LDDIVKATQYGELETVKELVESEGESVNNPDREGVTLLHWAAINNRLDVARYLISHGADVNAIGGVLGSTPLHWAARNGH  124 (600)
T ss_pred             hhhhhhHhhcchHHHHHHHHhhcCcCCCCCCcCCccceeHHHHcCcHHHHHHHHHcCCCccccCCCCCCCcchHHHHcCc
Confidence            3467789999999999999999 99999999999999999999999999999999999999998 567899999999999


Q ss_pred             HHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCC
Q psy3308         687 TDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANV  766 (838)
Q Consensus       687 ~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~  766 (838)
                      ..+|++|+++||+++.+|..|.++||.|++.|+.-++-+|+.+++++|.+|..|+||||+|+..|+...+..|+.-|+.+
T Consensus       125 ~~vv~lLlqhGAdpt~~D~~G~~~lHla~~~~~~~~vayll~~~~d~d~~D~~grTpLmwAaykg~~~~v~~LL~f~a~~  204 (600)
T KOG0509|consen  125 ISVVDLLLQHGADPTLKDKQGLTPLHLAAQFGHTALVAYLLSKGADIDLRDNNGRTPLMWAAYKGFALFVRRLLKFGASL  204 (600)
T ss_pred             HHHHHHHHHcCCCCceecCCCCcHHHHHHHhCchHHHHHHHHhcccCCCcCCCCCCHHHHHHHhcccHHHHHHHHhcccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999988899999999999


Q ss_pred             ccCC-CCCCcHHHHHHHhCcHHHHHHHHhCCCCCCCCCCccch-HHHHHHc
Q psy3308         767 NATT-NLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTNLFCC-ATILVKN  815 (838)
Q Consensus       767 ~~~~-~~g~t~l~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~-~~~~~~~  815 (838)
                      +..| .+|.||||+|+..|+..++.+|++.|++.+.+|.+|+| +++|.+.
T Consensus       205 ~~~d~~~g~TpLHwa~~~gN~~~v~Ll~~g~~~~d~~~~~g~tp~~LA~~~  255 (600)
T KOG0509|consen  205 LLTDDNHGNTPLHWAVVGGNLTAVKLLLEGGADLDKTNTNGKTPFDLAQER  255 (600)
T ss_pred             cccccccCCchHHHHHhcCCcceEehhhhcCCcccccccCCCCHHHHHHHh
Confidence            9998 78999999999999999999888889999999999999 9999877


No 41 
>PHA02795 ankyrin-like protein; Provisional
Probab=99.97  E-value=1.7e-30  Score=260.00  Aligned_cols=207  Identities=16%  Similarity=0.180  Sum_probs=129.6

Q ss_pred             HHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCC------ccCCCCChHHHHHHH--cCcHHHHHHHH
Q psy3308         590 IAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPH------AVAKNGYTPLHIAAK--KNQMDIATTLL  661 (838)
Q Consensus       590 ~v~~Ll~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~------~~~~~~~t~L~~A~~--~~~~~iv~~Ll  661 (838)
                      +.+|++.+|.++|....++     +|+..+..+++++|+++|++++      ..+..++|+||.++.  .|+.++|++|+
T Consensus        64 ~~~~~~~~~~~i~~~~~~~-----~~~~~~~k~~~~~l~s~~~~~~~~~~~~~~~~~~~~~L~~~~~n~~n~~eiV~~LI  138 (437)
T PHA02795         64 LYDYFRIHRDNIDQYIVDR-----LFAYITYKDIISALVSKNYMEDIFSIIIKNCNSVQDLLLYYLSNAYVEIDIVDFMV  138 (437)
T ss_pred             HHHHHHHcCcchhhhhhhh-----HHhhcchHHHHHHHHhcccccchhhhhhhccccccHHHHHHHHhcCCCHHHHHHHH
Confidence            3456666666666555444     5666666666666666666655      444556666666666  56666666666


Q ss_pred             hCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCC------CCCCcHhHHHHhcCCHHHHHHHHhCCCCCCC
Q psy3308         662 EYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQA------KNGLTPLHLCAQEDKVNVATITMFNGAEIDP  735 (838)
Q Consensus       662 ~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~------~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~  735 (838)
                      ++|++++..+  +.||+|.|+..++.+++++|+++|++.....      ..+.+++|.|+..++.+++++|+++|+++|.
T Consensus       139 ~~GADIn~~~--~~t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~GADIN~  216 (437)
T PHA02795        139 DHGAVIYKIE--CLNAYFRGICKKESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYIEDINQ  216 (437)
T ss_pred             HCCCCCCCCC--CCCHHHHHHHcCcHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhCcCCcCc
Confidence            6666666533  3566666666666666666666665321111      2345566666666666666666666666666


Q ss_pred             CCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhC--------cHHHHHHHHhCCCCCCCCC
Q psy3308         736 VTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQG--------RVLIIDLLLGAGAQPNATT  803 (838)
Q Consensus       736 ~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~--------~~~~v~~Ll~~ga~~~~~~  803 (838)
                      +|..|+||||+|+..|+.+++++|+++|+++|.+|..|.||||+|+..|        +.+++++|+++|++++...
T Consensus       217 kD~~G~TpLh~Aa~~g~~eiVelLL~~GAdIN~~d~~G~TpLh~Aa~~g~~~~~~~~~~eIvelLL~~gadI~~~~  292 (437)
T PHA02795        217 LDAGGRTLLYRAIYAGYIDLVSWLLENGANVNAVMSNGYTCLDVAVDRGSVIARRETHLKILEILLREPLSIDCIK  292 (437)
T ss_pred             CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCcccccccHHHHHHHHHhCCCCCCchh
Confidence            6666666666666666666666666666666666666666666666665        3466666666666666544


No 42 
>PHA02795 ankyrin-like protein; Provisional
Probab=99.96  E-value=6.2e-29  Score=248.86  Aligned_cols=234  Identities=15%  Similarity=0.135  Sum_probs=199.8

Q ss_pred             hHHHHHhhcCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCC------CCCCCCCcHHHHHHH--cCCHHHHHHH
Q psy3308         556 KVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVD------SQGKNGVTPLHVASH--YDHQNVALLL  627 (838)
Q Consensus       556 ~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ll~~~~~~~------~~~~~~~~~l~~A~~--~~~~~~v~~L  627 (838)
                      .+.+++..+|.+++....++     .|+..+..+++++|+.+|++++      ..+..++|+||.++.  .|+.+++++|
T Consensus        63 ~~~~~~~~~~~~i~~~~~~~-----~~~~~~~k~~~~~l~s~~~~~~~~~~~~~~~~~~~~~L~~~~~n~~n~~eiV~~L  137 (437)
T PHA02795         63 VLYDYFRIHRDNIDQYIVDR-----LFAYITYKDIISALVSKNYMEDIFSIIIKNCNSVQDLLLYYLSNAYVEIDIVDFM  137 (437)
T ss_pred             HHHHHHHHcCcchhhhhhhh-----HHhhcchHHHHHHHHhcccccchhhhhhhccccccHHHHHHHHhcCCCHHHHHHH
Confidence            34455556666677666555     8999999999999999999988      677889999999999  8999999999


Q ss_pred             HhCCCCCCccCCCCChHHHHHHHcCcHHHHHHHHhCCCCCCCCC------CCCCcHHHHHHHcCcHHHHHHHHhCCCCCC
Q psy3308         628 LDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAES------KAGFTPLHLSAQEGHTDMSSLLIEHGATVS  701 (838)
Q Consensus       628 l~~g~~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~------~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~  701 (838)
                      +++|++++..  .+.||+|.|+..++.+++++|+++|++.....      ..+.++++.|...++.+++++|+++|+++|
T Consensus       138 I~~GADIn~~--~~~t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~GADIN  215 (437)
T PHA02795        138 VDHGAVIYKI--ECLNAYFRGICKKESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYIEDIN  215 (437)
T ss_pred             HHCCCCCCCC--CCCCHHHHHHHcCcHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhCcCCcC
Confidence            9999999974  45799999999999999999999998532221      346789999999999999999999999999


Q ss_pred             CCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcC--------CHHHHHHHHHCCCCCccCCCCC
Q psy3308         702 HQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFG--------QLNMVRYLVENGANVNATTNLG  773 (838)
Q Consensus       702 ~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g--------~~~~v~~Ll~~g~~~~~~~~~g  773 (838)
                      .++..|.||||+|+..|+.+++++|+++|++++.++..|+||||+|+..|        +.+++++|+++|++++....  
T Consensus       216 ~kD~~G~TpLh~Aa~~g~~eiVelLL~~GAdIN~~d~~G~TpLh~Aa~~g~~~~~~~~~~eIvelLL~~gadI~~~~~--  293 (437)
T PHA02795        216 QLDAGGRTLLYRAIYAGYIDLVSWLLENGANVNAVMSNGYTCLDVAVDRGSVIARRETHLKILEILLREPLSIDCIKL--  293 (437)
T ss_pred             cCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCcccccccHHHHHHHHHhCCCCCCchhH--
Confidence            99999999999999999999999999999999999999999999999998        47999999999999987543  


Q ss_pred             CcHHHHHHHhCcHHHHHHHHhCCCCCCC
Q psy3308         774 YTPLHQASQQGRVLIIDLLLGAGAQPNA  801 (838)
Q Consensus       774 ~t~l~~A~~~~~~~~v~~Ll~~ga~~~~  801 (838)
                       |.+..  ...+.++++.|++++...+.
T Consensus       294 -~~~~~--~~~n~~~ik~lI~y~~~ldy  318 (437)
T PHA02795        294 -AILNN--TIENHDVIKLCIKYFMMVDY  318 (437)
T ss_pred             -Hhhhc--ccchHHHHHHHHHHHHhccc
Confidence             22211  11267899999988775443


No 43 
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.96  E-value=2.6e-28  Score=229.13  Aligned_cols=174  Identities=18%  Similarity=0.225  Sum_probs=130.6

Q ss_pred             CCChHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcC--cHHHHHHHHhCCCCCCCCC-CCCCcHhHHHHh
Q psy3308         640 NGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEG--HTDMSSLLIEHGATVSHQA-KNGLTPLHLCAQ  716 (838)
Q Consensus       640 ~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~~g--~~~iv~~Ll~~g~~~~~~~-~~~~t~l~~A~~  716 (838)
                      .+++||+.|+..|+.++|+.|++.   ++..+..|.||||+|+..+  +.+++++|+++|++++.++ ..|.||||+|+.
T Consensus        20 ~~~~pL~~A~~~~~~~~vk~Li~~---~n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~~~~g~TpLh~a~~   96 (209)
T PHA02859         20 RYCNPLFYYVEKDDIEGVKKWIKF---VNDCNDLYETPIFSCLEKDKVNVEILKFLIENGADVNFKTRDNNLSALHHYLS   96 (209)
T ss_pred             ccCcHHHHHHHhCcHHHHHHHHHh---hhccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccCCCCCCCHHHHHHH
Confidence            456777778877777777777764   3556667778888777644  6788888888888887775 467788887765


Q ss_pred             c---CCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHH--cCCHHHHHHHHHCCCCCccCCCCCCcHHHH-HHHhCcHHHHH
Q psy3308         717 E---DKVNVATITMFNGAEIDPVTKAGFTPLHIASH--FGQLNMVRYLVENGANVNATTNLGYTPLHQ-ASQQGRVLIID  790 (838)
Q Consensus       717 ~---g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~--~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~-A~~~~~~~~v~  790 (838)
                      .   ++.+++++|+++|++++.+|..|+||||+|+.  .++.+++++|+++|++++.+|..|.||||. |+..++.++++
T Consensus        97 ~~~~~~~eiv~~Ll~~gadin~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~~d~~g~t~Lh~~a~~~~~~~iv~  176 (209)
T PHA02859         97 FNKNVEPEILKILIDSGSSITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLNKDFDNNNILYSYILFHSDKKIFD  176 (209)
T ss_pred             hCccccHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHhcCCHHHHH
Confidence            3   46778888888888888888888888887765  357788888888888888888888888874 45567788888


Q ss_pred             HHHhCCCCCCCCCCccch-HHHHHHcC
Q psy3308         791 LLLGAGAQPNATTNLFCC-ATILVKNG  816 (838)
Q Consensus       791 ~Ll~~ga~~~~~~~~~~~-~~~~~~~~  816 (838)
                      +|+++|++++.+|..|.| +++|..++
T Consensus       177 ~Ll~~Gadi~~~d~~g~tpl~la~~~~  203 (209)
T PHA02859        177 FLTSLGIDINETNKSGYNCYDLIKFRN  203 (209)
T ss_pred             HHHHcCCCCCCCCCCCCCHHHHHhhhh
Confidence            888888888888888888 87777654


No 44 
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.96  E-value=8.1e-28  Score=225.73  Aligned_cols=175  Identities=17%  Similarity=0.212  Sum_probs=147.3

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHcC--cHHHHHHHHhCCCCCCCCC-CCCCcHHHHHHH
Q psy3308         607 NGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKN--QMDIATTLLEYNAKPNAES-KAGFTPLHLSAQ  683 (838)
Q Consensus       607 ~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~~--~~~iv~~Ll~~~~~~~~~~-~~g~t~L~~A~~  683 (838)
                      .+.+||+.|+..++.++|+.|++.   ++..+..|.||||.|+..+  +.+++++|+++|++++.++ ..|+||||+|+.
T Consensus        20 ~~~~pL~~A~~~~~~~~vk~Li~~---~n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~~~~g~TpLh~a~~   96 (209)
T PHA02859         20 RYCNPLFYYVEKDDIEGVKKWIKF---VNDCNDLYETPIFSCLEKDKVNVEILKFLIENGADVNFKTRDNNLSALHHYLS   96 (209)
T ss_pred             ccCcHHHHHHHhCcHHHHHHHHHh---hhccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccCCCCCCCHHHHHHH
Confidence            346788888888888888888865   4556777888888888754  7889999999998888886 478899998775


Q ss_pred             c---CcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHh--cCCHHHHHHHHhCCCCCCCCCCCCCcHHHH-HHHcCCHHHHH
Q psy3308         684 E---GHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQ--EDKVNVATITMFNGAEIDPVTKAGFTPLHI-ASHFGQLNMVR  757 (838)
Q Consensus       684 ~---g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~--~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~-A~~~g~~~~v~  757 (838)
                      .   ++.+++++|+++|++++.++..|.||||.|+.  .++.+++++|+++|++++.+|..|.||||. |+..++.++++
T Consensus        97 ~~~~~~~eiv~~Ll~~gadin~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~~d~~g~t~Lh~~a~~~~~~~iv~  176 (209)
T PHA02859         97 FNKNVEPEILKILIDSGSSITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLNKDFDNNNILYSYILFHSDKKIFD  176 (209)
T ss_pred             hCccccHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHhcCCHHHHH
Confidence            3   47899999999999999999999999998875  468899999999999999999999999995 56778999999


Q ss_pred             HHHHCCCCCccCCCCCCcHHHHHHHhC
Q psy3308         758 YLVENGANVNATTNLGYTPLHQASQQG  784 (838)
Q Consensus       758 ~Ll~~g~~~~~~~~~g~t~l~~A~~~~  784 (838)
                      +|+++|++++.+|..|+|||++|..++
T Consensus       177 ~Ll~~Gadi~~~d~~g~tpl~la~~~~  203 (209)
T PHA02859        177 FLTSLGIDINETNKSGYNCYDLIKFRN  203 (209)
T ss_pred             HHHHcCCCCCCCCCCCCCHHHHHhhhh
Confidence            999999999999999999999998654


No 45 
>KOG0502|consensus
Probab=99.95  E-value=1.1e-27  Score=204.75  Aligned_cols=230  Identities=23%  Similarity=0.301  Sum_probs=203.1

Q ss_pred             CCcHHHHHHHcCcHHHHHHHHhCCCC-CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHcCc
Q psy3308         575 GFTPLHLAAKYGRMKIAQMLLQKDAP-VDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQ  653 (838)
Q Consensus       575 ~~~~l~~a~~~~~~~~v~~Ll~~~~~-~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~  653 (838)
                      |..-+-.+...++.+++..+..-..+ +...+.+|+.+++.++-+++.+.+..++.+|...|..+-.+++|+.+++...+
T Consensus        62 ge~~~~~~~~s~nsd~~v~s~~~~~~~~~~t~p~g~~~~~v~ap~~s~~k~sttltN~~rgnevs~~p~s~~slsVhql~  141 (296)
T KOG0502|consen   62 GESLLTVAVRSGNSDVAVQSAQLDPDAIDETDPEGWSALLVAAPCGSVDKVSTTLTNGARGNEVSLMPWSPLSLSVHQLH  141 (296)
T ss_pred             CCcccchhhhcCCcHHHHHhhccCCCCCCCCCchhhhhhhhcCCCCCcceeeeeecccccCCccccccCChhhHHHHHHH
Confidence            34445567777888877777665433 34466779999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCC
Q psy3308         654 MDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEI  733 (838)
Q Consensus       654 ~~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~  733 (838)
                      ++.+..+.++.  +|..|..|.|||.+|+..|++.+|++|++.|+++....+...++|++|.+.|..+||+.|+..+.++
T Consensus       142 L~~~~~~~~n~--VN~~De~GfTpLiWAaa~G~i~vV~fLL~~GAdp~~lgk~resALsLAt~ggytdiV~lLL~r~vdV  219 (296)
T KOG0502|consen  142 LDVVDLLVNNK--VNACDEFGFTPLIWAAAKGHIPVVQFLLNSGADPDALGKYRESALSLATRGGYTDIVELLLTREVDV  219 (296)
T ss_pred             HHHHHHHhhcc--ccCccccCchHhHHHHhcCchHHHHHHHHcCCChhhhhhhhhhhHhHHhcCChHHHHHHHHhcCCCc
Confidence            99988888764  5888999999999999999999999999999999999889999999999999999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCCCCCCccc
Q psy3308         734 DPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTNLFC  807 (838)
Q Consensus       734 ~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~  807 (838)
                      |..|-+|-|||-+|++.||.+||+.|++.|++++..+..|++++..|++.|+- +|+..+++-++...+|+...
T Consensus       220 NvyDwNGgTpLlyAvrgnhvkcve~Ll~sGAd~t~e~dsGy~~mdlAValGyr-~Vqqvie~h~lkl~Q~~~~~  292 (296)
T KOG0502|consen  220 NVYDWNGGTPLLYAVRGNHVKCVESLLNSGADVTQEDDSGYWIMDLAVALGYR-IVQQVIEKHALKLCQDSEKR  292 (296)
T ss_pred             ceeccCCCceeeeeecCChHHHHHHHHhcCCCcccccccCCcHHHHHHHhhhH-HHHHHHHHHHHHHhhcccCC
Confidence            99999999999999999999999999999999999999999999999999988 88888887776666665443


No 46 
>KOG0502|consensus
Probab=99.95  E-value=8e-28  Score=205.48  Aligned_cols=236  Identities=27%  Similarity=0.343  Sum_probs=211.7

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHhCCCCCCCchhHHHHHhhcCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCC
Q psy3308         524 KGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDS  603 (838)
Q Consensus       524 ~~~~~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~  603 (838)
                      .|...+..+...++.++........++.                +..++.+|+++++.++-.++.+.+..++.++...|.
T Consensus        61 lge~~~~~~~~s~nsd~~v~s~~~~~~~----------------~~~t~p~g~~~~~v~ap~~s~~k~sttltN~~rgne  124 (296)
T KOG0502|consen   61 LGESLLTVAVRSGNSDVAVQSAQLDPDA----------------IDETDPEGWSALLVAAPCGSVDKVSTTLTNGARGNE  124 (296)
T ss_pred             cCCcccchhhhcCCcHHHHHhhccCCCC----------------CCCCCchhhhhhhhcCCCCCcceeeeeecccccCCc
Confidence            3444455677778888777776554332                334566799999999999999999999999999999


Q ss_pred             CCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHH
Q psy3308         604 QGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQ  683 (838)
Q Consensus       604 ~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~  683 (838)
                      .+..+++|+.+++...+.+.+..+.++  .+|..|..|.|||++|+.+|++.+|++|++.|++++....+..++|..|.+
T Consensus       125 vs~~p~s~~slsVhql~L~~~~~~~~n--~VN~~De~GfTpLiWAaa~G~i~vV~fLL~~GAdp~~lgk~resALsLAt~  202 (296)
T KOG0502|consen  125 VSLMPWSPLSLSVHQLHLDVVDLLVNN--KVNACDEFGFTPLIWAAAKGHIPVVQFLLNSGADPDALGKYRESALSLATR  202 (296)
T ss_pred             cccccCChhhHHHHHHHHHHHHHHhhc--cccCccccCchHhHHHHhcCchHHHHHHHHcCCChhhhhhhhhhhHhHHhc
Confidence            999999999999999999988888776  567889999999999999999999999999999999999999999999999


Q ss_pred             cCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCC
Q psy3308         684 EGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENG  763 (838)
Q Consensus       684 ~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g  763 (838)
                      .|..+||++|+..+.++|.-|.+|.|||-+|++.+|.+|++.|+..|++++..+..|.+++..|+..|.. +|+..+++-
T Consensus       203 ggytdiV~lLL~r~vdVNvyDwNGgTpLlyAvrgnhvkcve~Ll~sGAd~t~e~dsGy~~mdlAValGyr-~Vqqvie~h  281 (296)
T KOG0502|consen  203 GGYTDIVELLLTREVDVNVYDWNGGTPLLYAVRGNHVKCVESLLNSGADVTQEDDSGYWIMDLAVALGYR-IVQQVIEKH  281 (296)
T ss_pred             CChHHHHHHHHhcCCCcceeccCCCceeeeeecCChHHHHHHHHhcCCCcccccccCCcHHHHHHHhhhH-HHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999999999999999999987 999999988


Q ss_pred             CCCccCCCCCCcHHH
Q psy3308         764 ANVNATTNLGYTPLH  778 (838)
Q Consensus       764 ~~~~~~~~~g~t~l~  778 (838)
                      +..+..|+.-+||+|
T Consensus       282 ~lkl~Q~~~~~~~~~  296 (296)
T KOG0502|consen  282 ALKLCQDSEKRTPLH  296 (296)
T ss_pred             HHHHhhcccCCCCCC
Confidence            888888888888764


No 47 
>KOG0507|consensus
Probab=99.94  E-value=3.4e-26  Score=231.90  Aligned_cols=239  Identities=27%  Similarity=0.332  Sum_probs=214.6

Q ss_pred             cHHHHHHHcCcHHHHHHHHhCC-------------CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCCh
Q psy3308         577 TPLHLAAKYGRMKIAQMLLQKD-------------APVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYT  643 (838)
Q Consensus       577 ~~l~~a~~~~~~~~v~~Ll~~~-------------~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t  643 (838)
                      +-+..|++.|+.+.+..|++..             .++|.+|.+|.|+||.|+.+|+.+++++|++..+-+...+..|.+
T Consensus         5 qel~~a~ka~d~~tva~ll~~~~~r~~~l~~~trsds~n~qd~~gfTalhha~Lng~~~is~llle~ea~ldl~d~kg~~   84 (854)
T KOG0507|consen    5 QELIDACKAGDYDTVALLLSSKKGRSGLLFFTTRSDSHNLQDYSGFTLLHHAVLNGQNQISKLLLDYEALLDLCDTKGIL   84 (854)
T ss_pred             hhHHHhhhcccHHHHHHhccCCCCCCCCCCCCCCCccccccCccchhHHHHHHhcCchHHHHHHhcchhhhhhhhccCcc
Confidence            3466788999999999888741             235667889999999999999999999999999999999989999


Q ss_pred             HHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHH
Q psy3308         644 PLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVA  723 (838)
Q Consensus       644 ~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~  723 (838)
                      |||+|++.|+.++++.|+.++..+|..+..|.||||.|++.||.++|.+|+.+|++...+++.+.|+|..|++-|..+++
T Consensus        85 plhlaaw~g~~e~vkmll~q~d~~na~~~e~~tplhlaaqhgh~dvv~~Ll~~~adp~i~nns~~t~ldlA~qfgr~~Vv  164 (854)
T KOG0507|consen   85 PLHLAAWNGNLEIVKMLLLQTDILNAVNIENETPLHLAAQHGHLEVVFYLLKKNADPFIRNNSKETVLDLASRFGRAEVV  164 (854)
T ss_pred             eEEehhhcCcchHHHHHHhcccCCCcccccCcCccchhhhhcchHHHHHHHhcCCCccccCcccccHHHHHHHhhhhHHH
Confidence            99999999999999999999988999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhCCCCC--------CCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHHHHhC
Q psy3308         724 TITMFNGAEI--------DPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGA  795 (838)
Q Consensus       724 ~~L~~~~~~~--------~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~  795 (838)
                      +.|+.....+        ...+..+.+|||.|+++||.+|++.|++.|.++|..++.| |+||.|+-.|..++|++|++.
T Consensus       165 q~ll~~~~~~~~~~~~~~~~~~~~~~~plHlaakngh~~~~~~ll~ag~din~~t~~g-talheaalcgk~evvr~ll~~  243 (854)
T KOG0507|consen  165 QMLLQKKFPVQSSLRVGDIKRPFPAIYPLHLAAKNGHVECMQALLEAGFDINYTTEDG-TALHEAALCGKAEVVRFLLEI  243 (854)
T ss_pred             HHHhhhccchhhcccCCCCCCCCCCcCCcchhhhcchHHHHHHHHhcCCCcccccccc-hhhhhHhhcCcchhhhHHHhh
Confidence            9988763221        2355677899999999999999999999999999998876 799999999999999999999


Q ss_pred             CCCCCCCCCccch-HHHHHHcC
Q psy3308         796 GAQPNATTNLFCC-ATILVKNG  816 (838)
Q Consensus       796 ga~~~~~~~~~~~-~~~~~~~~  816 (838)
                      |.+..++|.+|+| +++..+..
T Consensus       244 gin~h~~n~~~qtaldil~d~~  265 (854)
T KOG0507|consen  244 GINTHIKNQHGQTALDIIIDLQ  265 (854)
T ss_pred             ccccccccccchHHHHHHHhcc
Confidence            9999999999999 88876644


No 48 
>KOG0507|consensus
Probab=99.92  E-value=8.7e-25  Score=221.76  Aligned_cols=262  Identities=27%  Similarity=0.363  Sum_probs=219.1

Q ss_pred             HHHHHHcCCHHHHHHHHhCCCCCCCchhHHHHHhhcCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCC
Q psy3308         529 LHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNG  608 (838)
Q Consensus       529 l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~  608 (838)
                      +.-|++.|+.+.+..|++......    --.+......+.+..|..|.|+||.|+.+|+.++++.|+++.+-++..+..|
T Consensus         7 l~~a~ka~d~~tva~ll~~~~~r~----~~l~~~trsds~n~qd~~gfTalhha~Lng~~~is~llle~ea~ldl~d~kg   82 (854)
T KOG0507|consen    7 LIDACKAGDYDTVALLLSSKKGRS----GLLFFTTRSDSHNLQDYSGFTLLHHAVLNGQNQISKLLLDYEALLDLCDTKG   82 (854)
T ss_pred             HHHhhhcccHHHHHHhccCCCCCC----CCCCCCCCCccccccCccchhHHHHHHhcCchHHHHHHhcchhhhhhhhccC
Confidence            334555566666666555322100    0000112234567778899999999999999999999999999999899999


Q ss_pred             CcHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCcHH
Q psy3308         609 VTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTD  688 (838)
Q Consensus       609 ~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~  688 (838)
                      .+|||+|+..|+.++++.|+.++..+|.....|.||||.|++.|+.+++.+|+.+|+++-+++..+.|+|..|++-|..+
T Consensus        83 ~~plhlaaw~g~~e~vkmll~q~d~~na~~~e~~tplhlaaqhgh~dvv~~Ll~~~adp~i~nns~~t~ldlA~qfgr~~  162 (854)
T KOG0507|consen   83 ILPLHLAAWNGNLEIVKMLLLQTDILNAVNIENETPLHLAAQHGHLEVVFYLLKKNADPFIRNNSKETVLDLASRFGRAE  162 (854)
T ss_pred             cceEEehhhcCcchHHHHHHhcccCCCcccccCcCccchhhhhcchHHHHHHHhcCCCccccCcccccHHHHHHHhhhhH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhCCCCC--------CCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHH
Q psy3308         689 MSSLLIEHGATV--------SHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLV  760 (838)
Q Consensus       689 iv~~Ll~~g~~~--------~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll  760 (838)
                      +|+.|++...++        ..++-.+.+|||.|+.+||.++++.|+..|.++|.....| |+||.|+.+|..++|.+|+
T Consensus       163 Vvq~ll~~~~~~~~~~~~~~~~~~~~~~~plHlaakngh~~~~~~ll~ag~din~~t~~g-talheaalcgk~evvr~ll  241 (854)
T KOG0507|consen  163 VVQMLLQKKFPVQSSLRVGDIKRPFPAIYPLHLAAKNGHVECMQALLEAGFDINYTTEDG-TALHEAALCGKAEVVRFLL  241 (854)
T ss_pred             HHHHHhhhccchhhcccCCCCCCCCCCcCCcchhhhcchHHHHHHHHhcCCCcccccccc-hhhhhHhhcCcchhhhHHH
Confidence            999999873222        1234467789999999999999999999999999887776 8999999999999999999


Q ss_pred             HCCCCCccCCCCCCcHHHHHHHhC---cHHHHHHHHhC
Q psy3308         761 ENGANVNATTNLGYTPLHQASQQG---RVLIIDLLLGA  795 (838)
Q Consensus       761 ~~g~~~~~~~~~g~t~l~~A~~~~---~~~~v~~Ll~~  795 (838)
                      +.|.+...++..|+|+|..-....   ..+++-++...
T Consensus       242 ~~gin~h~~n~~~qtaldil~d~~~~~~~ei~ga~~~~  279 (854)
T KOG0507|consen  242 EIGINTHIKNQHGQTALDIIIDLQENRRYEIAGAVKNF  279 (854)
T ss_pred             hhccccccccccchHHHHHHHhcchhhhhhhhhhhhcc
Confidence            999999999999999998877543   45565555543


No 49 
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.92  E-value=7.7e-24  Score=241.63  Aligned_cols=164  Identities=24%  Similarity=0.303  Sum_probs=102.2

Q ss_pred             CChHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCH
Q psy3308         641 GYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKV  720 (838)
Q Consensus       641 ~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~  720 (838)
                      +.++|+.|+..|+.++++.|++.|++++..|..|+||||+|+..|+.+++++|+++|++++.++..|.||||.|+..|+.
T Consensus       525 ~~~~L~~Aa~~g~~~~l~~Ll~~G~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~~d~~G~TpL~~A~~~g~~  604 (823)
T PLN03192        525 MASNLLTVASTGNAALLEELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAISAKHH  604 (823)
T ss_pred             chhHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCCCCCcCCCCCCHHHHHHHhCCH
Confidence            44566666666666666666666666666666666666666666666666666666666666666666666666666666


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCC
Q psy3308         721 NVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPN  800 (838)
Q Consensus       721 ~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ga~~~  800 (838)
                      +++++|+..+...+.  ..|.++||.|+..|+.+++++|+++|+++|.+|.+|+||||+|++.|+.+++++|+++|||++
T Consensus       605 ~iv~~L~~~~~~~~~--~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~GAdv~  682 (823)
T PLN03192        605 KIFRILYHFASISDP--HAAGDLLCTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQVAMAEDHVDMVRLLIMNGADVD  682 (823)
T ss_pred             HHHHHHHhcCcccCc--ccCchHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHHHHHHHcCCCCC
Confidence            666666655544322  234556666666666666666666666666666666666666666666666666666666666


Q ss_pred             CCCCcc
Q psy3308         801 ATTNLF  806 (838)
Q Consensus       801 ~~~~~~  806 (838)
                      .+|..|
T Consensus       683 ~~~~~g  688 (823)
T PLN03192        683 KANTDD  688 (823)
T ss_pred             CCCCCC
Confidence            666555


No 50 
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.91  E-value=5.6e-24  Score=242.20  Aligned_cols=220  Identities=24%  Similarity=0.286  Sum_probs=185.9

Q ss_pred             CCCcHHHHHHHcCcHHHHHHHHhC--CCCCCCCCCCCCcHHH-HHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHH
Q psy3308         574 KGFTPLHLAAKYGRMKIAQMLLQK--DAPVDSQGKNGVTPLH-VASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAK  650 (838)
Q Consensus       574 ~~~~~l~~a~~~~~~~~v~~Ll~~--~~~~~~~~~~~~~~l~-~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~  650 (838)
                      .++..+..|++.|+.+.++.+++.  +.++|..|..|.|||| .|+..++.+++++|+++|+    .+..|.||||.|+.
T Consensus        16 ~~~~~~l~A~~~g~~~~v~~lL~~~~~~~in~~d~~G~t~Lh~~A~~~~~~eiv~lLl~~g~----~~~~G~T~Lh~A~~   91 (743)
T TIGR00870        16 DEEKAFLPAAERGDLASVYRDLEEPKKLNINCPDRLGRSALFVAAIENENLELTELLLNLSC----RGAVGDTLLHAISL   91 (743)
T ss_pred             HHHHHHHHHHHcCCHHHHHHHhccccccCCCCcCccchhHHHHHHHhcChHHHHHHHHhCCC----CCCcChHHHHHHHh
Confidence            456889999999999999999999  8999999999999999 8999999999999999987    56689999999987


Q ss_pred             c---CcHHHHHHHHhCCCC------C----CCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCC-------------
Q psy3308         651 K---NQMDIATTLLEYNAK------P----NAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQA-------------  704 (838)
Q Consensus       651 ~---~~~~iv~~Ll~~~~~------~----~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~-------------  704 (838)
                      .   +..++++.+...+.+      +    ......|.||||.|+.+|+.++|++|+++|++++.++             
T Consensus        92 ~~~~~v~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~  171 (743)
T TIGR00870        92 EYVDAVEAILLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDS  171 (743)
T ss_pred             ccHHHHHHHHHHHhhcccccCchhhhccccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCCCCc
Confidence            2   223344444444322      1    1123468999999999999999999999999998653             


Q ss_pred             -CCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcC---------CHHHHHHHHHCCCCC-------c
Q psy3308         705 -KNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFG---------QLNMVRYLVENGANV-------N  767 (838)
Q Consensus       705 -~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g---------~~~~v~~Ll~~g~~~-------~  767 (838)
                       ..|.|||+.|+..|+.+++++|+++|++++.+|..|+||||+|+..+         ...+.+++++.++..       +
T Consensus       172 ~~~g~tpL~~Aa~~~~~~iv~lLl~~gadin~~d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~el~~  251 (743)
T TIGR00870       172 FYHGESPLNAAACLGSPSIVALLSEDPADILTADSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLRDSKELEV  251 (743)
T ss_pred             ccccccHHHHHHHhCCHHHHHHHhcCCcchhhHhhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCChHhhhh
Confidence             25889999999999999999999999999999999999999999987         345667777765554       6


Q ss_pred             cCCCCCCcHHHHHHHhCcHHHHHHHHhCCC
Q psy3308         768 ATTNLGYTPLHQASQQGRVLIIDLLLGAGA  797 (838)
Q Consensus       768 ~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ga  797 (838)
                      ..|.+|.|||++|+..|+.+++++|++.++
T Consensus       252 i~N~~g~TPL~~A~~~g~~~l~~lLL~~~~  281 (743)
T TIGR00870       252 ILNHQGLTPLKLAAKEGRIVLFRLKLAIKY  281 (743)
T ss_pred             hcCCCCCCchhhhhhcCCccHHHHHHHHHH
Confidence            678999999999999999999999999543


No 51 
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.91  E-value=2.6e-23  Score=237.27  Aligned_cols=194  Identities=21%  Similarity=0.272  Sum_probs=173.3

Q ss_pred             HHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHcCcHHHHHHHHhCCCCC
Q psy3308         588 MKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKP  667 (838)
Q Consensus       588 ~~~v~~Ll~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~  667 (838)
                      .++-..+.+.+...  .+..+.++|+.|+..|+.++++.|++.|++++..|..|.||||.|+..|+.+++++|+++|+++
T Consensus       507 l~v~~ll~~~~~~~--~~~~~~~~L~~Aa~~g~~~~l~~Ll~~G~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadi  584 (823)
T PLN03192        507 LNVGDLLGDNGGEH--DDPNMASNLLTVASTGNAALLEELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNV  584 (823)
T ss_pred             ccHHHHHhhccccc--CCccchhHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCCC
Confidence            44445555554432  3345678999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHH
Q psy3308         668 NAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIA  747 (838)
Q Consensus       668 ~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A  747 (838)
                      +.+|..|.||||.|+..|+.+++++|++.++..+  ...+.++||.|+..|+.+++++|+++|+++|.+|..|+||||+|
T Consensus       585 n~~d~~G~TpL~~A~~~g~~~iv~~L~~~~~~~~--~~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin~~d~~G~TpLh~A  662 (823)
T PLN03192        585 HIRDANGNTALWNAISAKHHKIFRILYHFASISD--PHAAGDLLCTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQVA  662 (823)
T ss_pred             CCcCCCCCCHHHHHHHhCCHHHHHHHHhcCcccC--cccCchHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHH
Confidence            9999999999999999999999999999887654  34577999999999999999999999999999999999999999


Q ss_pred             HHcCCHHHHHHHHHCCCCCccCCCCC-CcHHHHHHHhCc
Q psy3308         748 SHFGQLNMVRYLVENGANVNATTNLG-YTPLHQASQQGR  785 (838)
Q Consensus       748 ~~~g~~~~v~~Ll~~g~~~~~~~~~g-~t~l~~A~~~~~  785 (838)
                      +..|+.+++++|+++|++++..|..| .||+..+.....
T Consensus       663 ~~~g~~~iv~~Ll~~GAdv~~~~~~g~~t~~~l~~~~~~  701 (823)
T PLN03192        663 MAEDHVDMVRLLIMNGADVDKANTDDDFSPTELRELLQK  701 (823)
T ss_pred             HHCCcHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHHHH
Confidence            99999999999999999999999988 899988865443


No 52 
>KOG0514|consensus
Probab=99.89  E-value=2e-23  Score=193.08  Aligned_cols=161  Identities=25%  Similarity=0.391  Sum_probs=129.8

Q ss_pred             CCccCCCCChHHHHHHHcCcHHHHHHHHhCC-CCCCCCCCCCCcHHHHHHHc-----CcHHHHHHHHhCCCCCCCC-CCC
Q psy3308         634 PHAVAKNGYTPLHIAAKKNQMDIATTLLEYN-AKPNAESKAGFTPLHLSAQE-----GHTDMSSLLIEHGATVSHQ-AKN  706 (838)
Q Consensus       634 ~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~-~~~~~~~~~g~t~L~~A~~~-----g~~~iv~~Ll~~g~~~~~~-~~~  706 (838)
                      +|..|.+|+|+||+|+.+.++++|+.||+.| ++++..+..|.||++.|+..     .+.++|.-|...| ++|.+ ...
T Consensus       261 VNlaDsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mg-nVNaKAsQ~  339 (452)
T KOG0514|consen  261 VNLADSNGNTALHYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMG-DVNAKASQH  339 (452)
T ss_pred             hhhhcCCCCeeeeeeecccchHHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhcc-Ccchhhhhh
Confidence            3456777888888888888888888888876 56777788888888877643     3567777777776 45554 456


Q ss_pred             CCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHC-CCCCccCCCCCCcHHHHHHHhCc
Q psy3308         707 GLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVEN-GANVNATTNLGYTPLHQASQQGR  785 (838)
Q Consensus       707 ~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~l~~A~~~~~  785 (838)
                      |.|+||+|+..|+.++|+.|+.-|+++|.+|.+|.|+||+|+.+||.+||++|+.. ++|....|.+|.|||+.|...||
T Consensus       340 gQTALMLAVSHGr~d~vk~LLacgAdVNiQDdDGSTALMCA~EHGhkEivklLLA~p~cd~sLtD~DgSTAl~IAleagh  419 (452)
T KOG0514|consen  340 GQTALMLAVSHGRVDMVKALLACGADVNIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCDISLTDVDGSTALSIALEAGH  419 (452)
T ss_pred             cchhhhhhhhcCcHHHHHHHHHccCCCccccCCccHHHhhhhhhChHHHHHHHhccCcccceeecCCCchhhhhHHhcCc
Confidence            88888888888888888888888888888888888888888888888888888886 78888888889999999999998


Q ss_pred             HHHHHHHHhC
Q psy3308         786 VLIIDLLLGA  795 (838)
Q Consensus       786 ~~~v~~Ll~~  795 (838)
                      -+|.-+|..+
T Consensus       420 ~eIa~mlYa~  429 (452)
T KOG0514|consen  420 REIAVMLYAH  429 (452)
T ss_pred             hHHHHHHHHH
Confidence            8888888754


No 53 
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.89  E-value=8.4e-23  Score=184.12  Aligned_cols=146  Identities=18%  Similarity=0.219  Sum_probs=126.0

Q ss_pred             CCCCCCCCCCCCCcHHHHHHHcCcH----HHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHH---HHHHHHhCCCCCCC
Q psy3308         663 YNAKPNAESKAGFTPLHLSAQEGHT----DMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVN---VATITMFNGAEIDP  735 (838)
Q Consensus       663 ~~~~~~~~~~~g~t~L~~A~~~g~~----~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~---i~~~L~~~~~~~~~  735 (838)
                      ++++++..+..+.++|+.|++.|+.    +++++|++.|+.++..+..|+||||+|+..|+.+   ++++|+++|++++.
T Consensus         9 ~~~~~~~~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~   88 (166)
T PHA02743          9 NNLGAVEIDEDEQNTFLRICRTGNIYELMEVAPFISGDGHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADINA   88 (166)
T ss_pred             cchHHhhhccCCCcHHHHHHHcCCHHHHHHHHHHHhhcchhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCCC
Confidence            4556666777778888888888887    6667788888888888888999999999888765   47899999999999


Q ss_pred             CC-CCCCcHHHHHHHcCCHHHHHHHHH-CCCCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCCCCCCccch
Q psy3308         736 VT-KAGFTPLHIASHFGQLNMVRYLVE-NGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTNLFCC  808 (838)
Q Consensus       736 ~~-~~g~t~l~~A~~~g~~~~v~~Ll~-~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~  808 (838)
                      ++ ..|.||||+|+..|+.+++++|++ .|++++..|..|.||||+|+..++.+++++|+++|++++.++..|.+
T Consensus        89 ~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~  163 (166)
T PHA02743         89 RELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGAINYQHETAYHIAYKMRDRRMMEILRANGAVCDDPLSIGLS  163 (166)
T ss_pred             CCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcccCCcc
Confidence            88 589999999999999999999995 79999999999999999999999999999999999999999887753


No 54 
>KOG0505|consensus
Probab=99.89  E-value=7.6e-23  Score=200.62  Aligned_cols=225  Identities=27%  Similarity=0.366  Sum_probs=154.9

Q ss_pred             cHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHcCcHHH
Q psy3308         577 TPLHLAAKYGRMKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDI  656 (838)
Q Consensus       577 ~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~i  656 (838)
                      -.+..|+..+..+-|+.|+..|+.++..+.+|.|+||.++...+.+||++|+++|+++|..|..++||||.|+-.|++.+
T Consensus        42 a~~l~A~~~~d~~ev~~ll~~ga~~~~~n~DglTalhq~~id~~~e~v~~l~e~ga~Vn~~d~e~wtPlhaaascg~~~i  121 (527)
T KOG0505|consen   42 AVFLEACSRGDLEEVRKLLNRGASPNLCNVDGLTALHQACIDDNLEMVKFLVENGANVNAQDNEGWTPLHAAASCGYLNI  121 (527)
T ss_pred             HHHHhccccccHHHHHHHhccCCCccccCCccchhHHHHHhcccHHHHHHHHHhcCCccccccccCCcchhhcccccHHH
Confidence            34667888899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhC-CCCCCCCCCCCCcHhHHHHhcCC----H-HHHHHHHhCC
Q psy3308         657 ATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEH-GATVSHQAKNGLTPLHLCAQEDK----V-NVATITMFNG  730 (838)
Q Consensus       657 v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~-g~~~~~~~~~~~t~l~~A~~~g~----~-~i~~~L~~~~  730 (838)
                      +++|+.+|+++...+..|..|+..+...-..+++..-... |.++            -|++.-.    + ++-.++. .|
T Consensus       122 ~~~li~~gA~~~avNsdg~~P~dl~e~ea~~~~l~~~~~r~gi~i------------ea~R~~~e~~ml~D~~q~l~-~G  188 (527)
T KOG0505|consen  122 VEYLIQHGANLLAVNSDGNMPYDLAEDEATLDVLETEMARQGIDI------------EAARKAEEQTMLDDARQWLN-AG  188 (527)
T ss_pred             HHHHHHhhhhhhhccCCCCCccccccCcchhHHHHHHHHHhcccH------------HHHhhhhHHHHHHHHHHHHh-cc
Confidence            9999999999888888887777665543333333222111 1111            1111100    0 2223333 45


Q ss_pred             CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCCCCCCccch-H
Q psy3308         731 AEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTNLFCC-A  809 (838)
Q Consensus       731 ~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~-~  809 (838)
                      .+.+..+..|.|+||.|+.+|..+..++|++.|.+++.+|.+||||||.|+.=|+.++.++|+++|++.+..+..|++ +
T Consensus       189 ~~~d~~~~rG~T~lHvAaa~Gy~e~~~lLl~ag~~~~~~D~dgWtPlHAAA~Wg~~~~~elL~~~ga~~d~~t~~g~~p~  268 (527)
T KOG0505|consen  189 AELDARHARGATALHVAAANGYTEVAALLLQAGYSVNIKDYDGWTPLHAAAHWGQEDACELLVEHGADMDAKTKMGETPL  268 (527)
T ss_pred             ccccccccccchHHHHHHhhhHHHHHHHHHHhccCcccccccCCCcccHHHHhhhHhHHHHHHHhhcccchhhhcCCCCc
Confidence            555555555666666666666666666666666666666666666666666666666666666666666666666666 5


Q ss_pred             HHHHH
Q psy3308         810 TILVK  814 (838)
Q Consensus       810 ~~~~~  814 (838)
                      +++.+
T Consensus       269 dv~de  273 (527)
T KOG0505|consen  269 DVADE  273 (527)
T ss_pred             cchhh
Confidence            55443


No 55 
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.89  E-value=2.3e-22  Score=228.96  Aligned_cols=225  Identities=20%  Similarity=0.174  Sum_probs=126.9

Q ss_pred             cHHHHHHHcCcHHHHHHHHHC--CCCCCccccCCCcHHH-HHHHcCCHHHHHHHHHcCCCCccccCCCCcHHHHHHHcC-
Q psy3308          97 TPLYMAAQENHDGVVRYLLSK--GGNQTLATEHNITPLH-VACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSG-  172 (838)
Q Consensus        97 t~l~~A~~~g~~~~v~~L~~~--~~~~~~~~~~~~~~l~-~Aa~~g~~~iv~~L~~~~~~~~~~~~~~~tal~~A~~~g-  172 (838)
                      ++|+.||+.|+.+.|+.++++  +.++|..|..|.|||| .|+.+++.+++++|+++|+    .+..|.||||.|+.++ 
T Consensus        19 ~~~l~A~~~g~~~~v~~lL~~~~~~~in~~d~~G~t~Lh~~A~~~~~~eiv~lLl~~g~----~~~~G~T~Lh~A~~~~~   94 (743)
T TIGR00870        19 KAFLPAAERGDLASVYRDLEEPKKLNINCPDRLGRSALFVAAIENENLELTELLLNLSC----RGAVGDTLLHAISLEYV   94 (743)
T ss_pred             HHHHHHHHcCCHHHHHHHhccccccCCCCcCccchhHHHHHHHhcChHHHHHHHHhCCC----CCCcChHHHHHHHhccH
Confidence            444444444444444444444  4444444444444444 4444444444444444443    2334444444444311 


Q ss_pred             --CHHHHHHHHHcCCCc----------cCCCCCCccHHHHHHhCCcHHHHHHHHhCCCCCCcc--------------cCC
Q psy3308         173 --HDNVIDILIEKGAAL----------YSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEI--------------TVD  226 (838)
Q Consensus       173 --~~~iv~~L~~~~~~~----------~~~~~~~~~~l~~A~~~g~~~~v~~L~~~~~~~~~~--------------~~~  226 (838)
                        ..+++.++...+...          ......|.||||+|+..|+.++|++|+++|++++..              ...
T Consensus        95 ~~v~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~  174 (743)
T TIGR00870        95 DAVEAILLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSFYH  174 (743)
T ss_pred             HHHHHHHHHHhhcccccCchhhhccccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCCCCcccc
Confidence              111222222222110          001123445555555555555555555555444422              134


Q ss_pred             CccHHHHHHhcCCHHHHHHHHHCCCCccccccCCCchHHHHHhhCCcccccc-ChHHHHHHHHhCCCCC-------CCCC
Q psy3308         227 YLTALHVASHCGHVRVAKTLLDRKADPNARALNGFTPLHIACKKNRYKSSHC-NHVWVAKTLLDRKADP-------NARA  298 (838)
Q Consensus       227 ~~~~l~~A~~~g~~~iv~~L~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~-~~~~i~~~Ll~~~~~~-------~~~~  298 (838)
                      +.+||+.|+..|+.+++++|++.|++++..+..|+||+|.|+..+....... ....+.+++++.+..+       +..+
T Consensus       175 g~tpL~~Aa~~~~~~iv~lLl~~gadin~~d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~el~~i~N  254 (743)
T TIGR00870       175 GESPLNAAACLGSPSIVALLSEDPADILTADSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLRDSKELEVILN  254 (743)
T ss_pred             cccHHHHHHHhCCHHHHHHHhcCCcchhhHhhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCChHhhhhhcC
Confidence            7899999999999999999999999999999999999999998763221000 0123445555544433       5567


Q ss_pred             CCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy3308         299 LNGFTPLHIACKKNRYKVVELLLKYGA  325 (838)
Q Consensus       299 ~~~~~~l~~A~~~g~~~~v~~L~~~~~  325 (838)
                      .+|.|||+.|+..|+.+++++|++.+.
T Consensus       255 ~~g~TPL~~A~~~g~~~l~~lLL~~~~  281 (743)
T TIGR00870       255 HQGLTPLKLAAKEGRIVLFRLKLAIKY  281 (743)
T ss_pred             CCCCCchhhhhhcCCccHHHHHHHHHH
Confidence            788888888888888888888887543


No 56 
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.87  E-value=1.8e-21  Score=175.48  Aligned_cols=145  Identities=17%  Similarity=0.220  Sum_probs=118.9

Q ss_pred             CCCCCCccCCCCChHHHHHHHcCcH----HHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCcHH---HHHHHHhCCCCCCC
Q psy3308         630 RGASPHAVAKNGYTPLHIAAKKNQM----DIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTD---MSSLLIEHGATVSH  702 (838)
Q Consensus       630 ~g~~~~~~~~~~~t~L~~A~~~~~~----~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~---iv~~Ll~~g~~~~~  702 (838)
                      ++++++..+..+.+++|.|++.|++    +++++|.+.|..++.+|..|+||||+|+..|+.+   ++++|+++|++++.
T Consensus         9 ~~~~~~~~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~   88 (166)
T PHA02743          9 NNLGAVEIDEDEQNTFLRICRTGNIYELMEVAPFISGDGHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADINA   88 (166)
T ss_pred             cchHHhhhccCCCcHHHHHHHcCCHHHHHHHHHHHhhcchhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCCC
Confidence            4556666666777888888888887    5666777888888888888888888888887754   47888888888888


Q ss_pred             CC-CCCCcHhHHHHhcCCHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCC
Q psy3308         703 QA-KNGLTPLHLCAQEDKVNVATITMF-NGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGY  774 (838)
Q Consensus       703 ~~-~~~~t~l~~A~~~g~~~i~~~L~~-~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~  774 (838)
                      ++ ..|.||||+|+..|+.+++++|+. .|++++.++..|+||||+|+..++.+++++|+++|++++.++..|.
T Consensus        89 ~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~  162 (166)
T PHA02743         89 RELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGAINYQHETAYHIAYKMRDRRMMEILRANGAVCDDPLSIGL  162 (166)
T ss_pred             CCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcccCCc
Confidence            87 478889999998888888888885 7888888888899999999998999999999999998888887664


No 57 
>KOG0514|consensus
Probab=99.86  E-value=2.1e-21  Score=179.81  Aligned_cols=168  Identities=27%  Similarity=0.378  Sum_probs=135.4

Q ss_pred             HHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCC-CCCCccCCCCChHHHHHHHc-----CcHHHHHHHH
Q psy3308         588 MKIAQMLLQKDAPVDSQGKNGVTPLHVASHYDHQNVALLLLDRG-ASPHAVAKNGYTPLHIAAKK-----NQMDIATTLL  661 (838)
Q Consensus       588 ~~~v~~Ll~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~~~t~L~~A~~~-----~~~~iv~~Ll  661 (838)
                      .++++|.+      |..|.+|+|+||+|+...++++|+.|++.| ++++..+..|.||++.++..     .+.++|..|.
T Consensus       254 ~~lL~yvV------NlaDsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF  327 (452)
T KOG0514|consen  254 PPLLEYVV------NLADSNGNTALHYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLF  327 (452)
T ss_pred             hHHHHHHh------hhhcCCCCeeeeeeecccchHHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHH
Confidence            45555554      557778888888888888888888888774 67777788888888887643     4677888888


Q ss_pred             hCCCCCCCC-CCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhC-CCCCCCCCCC
Q psy3308         662 EYNAKPNAE-SKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFN-GAEIDPVTKA  739 (838)
Q Consensus       662 ~~~~~~~~~-~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~-~~~~~~~~~~  739 (838)
                      ..| ++|.+ .+.|+|+|+.|+.+|+.++|+.|+..|+++|.+|.+|.|+||.|++.||.+|++.|+.. ++++...|.+
T Consensus       328 ~mg-nVNaKAsQ~gQTALMLAVSHGr~d~vk~LLacgAdVNiQDdDGSTALMCA~EHGhkEivklLLA~p~cd~sLtD~D  406 (452)
T KOG0514|consen  328 KMG-DVNAKASQHGQTALMLAVSHGRVDMVKALLACGADVNIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCDISLTDVD  406 (452)
T ss_pred             hcc-CcchhhhhhcchhhhhhhhcCcHHHHHHHHHccCCCccccCCccHHHhhhhhhChHHHHHHHhccCcccceeecCC
Confidence            876 44544 46788999999999999999999999999999999999999999999999999988865 6777778888


Q ss_pred             CCcHHHHHHHcCCHHHHHHHHHC
Q psy3308         740 GFTPLHIASHFGQLNMVRYLVEN  762 (838)
Q Consensus       740 g~t~l~~A~~~g~~~~v~~Ll~~  762 (838)
                      |.|+|+.|...||.+|.-+|..+
T Consensus       407 gSTAl~IAleagh~eIa~mlYa~  429 (452)
T KOG0514|consen  407 GSTALSIALEAGHREIAVMLYAH  429 (452)
T ss_pred             CchhhhhHHhcCchHHHHHHHHH
Confidence            99999999999999998888765


No 58 
>KOG0505|consensus
Probab=99.86  E-value=1.9e-21  Score=190.92  Aligned_cols=226  Identities=29%  Similarity=0.446  Sum_probs=194.0

Q ss_pred             HHHHHHHcCCHHHHHHHHhCCCCCCCchhHHHHHhhcCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCC
Q psy3308         528 PLHLAAKYGRMKIAQMLLQKDAPVDSQGKVASILTESGASITATTKKGFTPLHLAAKYGRMKIAQMLLQKDAPVDSQGKN  607 (838)
Q Consensus       528 ~l~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~  607 (838)
                      .+.-|+..|..+-++.|+..+.                 .++..+.+|.|++|.++...+.+||++|+++|++||..|..
T Consensus        43 ~~l~A~~~~d~~ev~~ll~~ga-----------------~~~~~n~DglTalhq~~id~~~e~v~~l~e~ga~Vn~~d~e  105 (527)
T KOG0505|consen   43 VFLEACSRGDLEEVRKLLNRGA-----------------SPNLCNVDGLTALHQACIDDNLEMVKFLVENGANVNAQDNE  105 (527)
T ss_pred             HHHhccccccHHHHHHHhccCC-----------------CccccCCccchhHHHHHhcccHHHHHHHHHhcCCccccccc
Confidence            4556788888888888887653                 34677889999999999999999999999999999999999


Q ss_pred             CCcHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHcCcHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHcC-
Q psy3308         608 GVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLE-YNAKPNAESKAGFTPLHLSAQEG-  685 (838)
Q Consensus       608 ~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~-~~~~~~~~~~~g~t~L~~A~~~g-  685 (838)
                      ++||+|.|+.+++..++++|+..|+++...+..|..|...+...-..+++..-.. .|++           +..+-... 
T Consensus       106 ~wtPlhaaascg~~~i~~~li~~gA~~~avNsdg~~P~dl~e~ea~~~~l~~~~~r~gi~-----------iea~R~~~e  174 (527)
T KOG0505|consen  106 GWTPLHAAASCGYLNIVEYLIQHGANLLAVNSDGNMPYDLAEDEATLDVLETEMARQGID-----------IEAARKAEE  174 (527)
T ss_pred             cCCcchhhcccccHHHHHHHHHhhhhhhhccCCCCCccccccCcchhHHHHHHHHHhccc-----------HHHHhhhhH
Confidence            9999999999999999999999999999999999999888877766666665544 2333           11221111 


Q ss_pred             ---cHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHC
Q psy3308         686 ---HTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVEN  762 (838)
Q Consensus       686 ---~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~  762 (838)
                         -.++-+|+. .|...+.....|.|+||.|+-+|..++.++|+..|.+++.+|.+|+||||.|+..|+.++++.|+++
T Consensus       175 ~~ml~D~~q~l~-~G~~~d~~~~rG~T~lHvAaa~Gy~e~~~lLl~ag~~~~~~D~dgWtPlHAAA~Wg~~~~~elL~~~  253 (527)
T KOG0505|consen  175 QTMLDDARQWLN-AGAELDARHARGATALHVAAANGYTEVAALLLQAGYSVNIKDYDGWTPLHAAAHWGQEDACELLVEH  253 (527)
T ss_pred             HHHHHHHHHHHh-ccccccccccccchHHHHHHhhhHHHHHHHHHHhccCcccccccCCCcccHHHHhhhHhHHHHHHHh
Confidence               135556666 7888887877799999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCccCCCCCCcHHHHHHH
Q psy3308         763 GANVNATTNLGYTPLHQASQ  782 (838)
Q Consensus       763 g~~~~~~~~~g~t~l~~A~~  782 (838)
                      |++++..+..|.||+.+|..
T Consensus       254 ga~~d~~t~~g~~p~dv~de  273 (527)
T KOG0505|consen  254 GADMDAKTKMGETPLDVADE  273 (527)
T ss_pred             hcccchhhhcCCCCccchhh
Confidence            99999999999999999885


No 59 
>PHA02741 hypothetical protein; Provisional
Probab=99.85  E-value=1.4e-20  Score=171.01  Aligned_cols=131  Identities=20%  Similarity=0.295  Sum_probs=110.7

Q ss_pred             CCCCCCCcHHHHHHHcCcHHHHHHHHh------CCCCCCCCCCCCCcHhHHHHhcCC----HHHHHHHHhCCCCCCCCCC
Q psy3308         669 AESKAGFTPLHLSAQEGHTDMSSLLIE------HGATVSHQAKNGLTPLHLCAQEDK----VNVATITMFNGAEIDPVTK  738 (838)
Q Consensus       669 ~~~~~g~t~L~~A~~~g~~~iv~~Ll~------~g~~~~~~~~~~~t~l~~A~~~g~----~~i~~~L~~~~~~~~~~~~  738 (838)
                      .++..|.||||+|++.|+.+++++|++      .|++++.++..|.||||+|+..|+    .+++++|++.|++++.++.
T Consensus        16 ~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~~~~   95 (169)
T PHA02741         16 EKNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINAQEM   95 (169)
T ss_pred             ccccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCCCCc
Confidence            456677888888888888888887743      357788888888999999998888    4788899999999998885


Q ss_pred             -CCCcHHHHHHHcCCHHHHHHHHH-CCCCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCC
Q psy3308         739 -AGFTPLHIASHFGQLNMVRYLVE-NGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQP  799 (838)
Q Consensus       739 -~g~t~l~~A~~~g~~~~v~~Ll~-~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ga~~  799 (838)
                       .|+||||+|+..++.+++++|++ .|++++..|..|+|||++|+..++.+++++|++.++..
T Consensus        96 ~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~~g~tpL~~A~~~~~~~iv~~L~~~~~~~  158 (169)
T PHA02741         96 LEGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNADNKSPFELAIDNEDVAMMQILREIVATS  158 (169)
T ss_pred             CCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHh
Confidence             89999999999999999999997 48999999999999999999999999999999876653


No 60 
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.84  E-value=6e-20  Score=177.62  Aligned_cols=146  Identities=22%  Similarity=0.248  Sum_probs=91.4

Q ss_pred             HHHHHHHcCcHHHHHHHHhCCCCCCCCC----CCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCC-CCCCCcHhHHHHhcC
Q psy3308         644 PLHIAAKKNQMDIATTLLEYNAKPNAES----KAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQ-AKNGLTPLHLCAQED  718 (838)
Q Consensus       644 ~L~~A~~~~~~~iv~~Ll~~~~~~~~~~----~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~-~~~~~t~l~~A~~~g  718 (838)
                      +|+.|+..|+.+++++|+++|++++..+    ..|.||||+|+..++.+++++|+++|++++.. +..|.||||.|+..|
T Consensus        36 lL~~A~~~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g~TpLh~Aa~~~  115 (300)
T PHA02884         36 ILYSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAKITPLYISVLHG  115 (300)
T ss_pred             HHHHHHHcCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCCCCHHHHHHHcC
Confidence            4455555566666666666666666552    35666666666666666666666666666664 345666666666666


Q ss_pred             CHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCC
Q psy3308         719 KVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGA  797 (838)
Q Consensus       719 ~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ga  797 (838)
                      +.+++++|+++|++++.+|..|.|||++|+..++.+++..+.+  ..   .+..+.+|+.++   ++.+++++|+.+++
T Consensus       116 ~~eivklLL~~GAdin~kd~~G~TpL~~A~~~~~~~~~~~~~~--~~---~~~~~~~~~~~~---~n~ei~~~Lish~v  186 (300)
T PHA02884        116 CLKCLEILLSYGADINIQTNDMVTPIELALMICNNFLAFMICD--NE---ISNFYKHPKKIL---INFDILKILVSHFI  186 (300)
T ss_pred             CHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCChhHHHHhcC--Cc---ccccccChhhhh---ccHHHHHHHHHHHH
Confidence            6666666666666666666666677777666666666554432  11   234455666654   35667777776666


No 61 
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.83  E-value=2.3e-20  Score=167.39  Aligned_cols=132  Identities=25%  Similarity=0.320  Sum_probs=108.1

Q ss_pred             CCCCCCCCcHHHHHHHcCcHHHHHHHHhCCC--C-----CCCCCCCCCcHhHHHHhcCCHH---HHHHHHhCCCCCCCCC
Q psy3308         668 NAESKAGFTPLHLSAQEGHTDMSSLLIEHGA--T-----VSHQAKNGLTPLHLCAQEDKVN---VATITMFNGAEIDPVT  737 (838)
Q Consensus       668 ~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~--~-----~~~~~~~~~t~l~~A~~~g~~~---i~~~L~~~~~~~~~~~  737 (838)
                      +..|..|.||||+|++.|+.  +.++...+.  +     ++..+..|.||||+|+..|+.+   ++++|+++|++++.++
T Consensus        11 ~~~d~~g~tpLh~A~~~g~~--~~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~~~   88 (154)
T PHA02736         11 SEPDIEGENILHYLCRNGGV--TDLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADINGKE   88 (154)
T ss_pred             HhcCCCCCCHHHHHHHhCCH--HHHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcCCCccccC
Confidence            34556677888888877763  333332221  1     2345778999999999999874   6889999999999998


Q ss_pred             -CCCCcHHHHHHHcCCHHHHHHHHHC-CCCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCCC
Q psy3308         738 -KAGFTPLHIASHFGQLNMVRYLVEN-GANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNA  801 (838)
Q Consensus       738 -~~g~t~l~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ga~~~~  801 (838)
                       ..|+||||+|+..|+.+++++|+++ |++++..|..|.|||++|+..|+.+++++|+++|++.++
T Consensus        89 ~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tpL~~A~~~~~~~i~~~Ll~~ga~~~~  154 (154)
T PHA02736         89 RVFGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPYYVACERHDAKMMNILRAKGAQCKV  154 (154)
T ss_pred             CCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence             4899999999999999999999985 999999999999999999999999999999999998764


No 62 
>PHA02741 hypothetical protein; Provisional
Probab=99.82  E-value=1.5e-19  Score=164.15  Aligned_cols=131  Identities=25%  Similarity=0.301  Sum_probs=107.5

Q ss_pred             ccCCCCChHHHHHHHcCcHHHHHHHHh------CCCCCCCCCCCCCcHHHHHHHcCc----HHHHHHHHhCCCCCCCCCC
Q psy3308         636 AVAKNGYTPLHIAAKKNQMDIATTLLE------YNAKPNAESKAGFTPLHLSAQEGH----TDMSSLLIEHGATVSHQAK  705 (838)
Q Consensus       636 ~~~~~~~t~L~~A~~~~~~~iv~~Ll~------~~~~~~~~~~~g~t~L~~A~~~g~----~~iv~~Ll~~g~~~~~~~~  705 (838)
                      ..+..|.||||.|+..|+.++++.|++      .|++++.+|..|+||||+|+..|+    .+++++|++.|++++.++.
T Consensus        16 ~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~~~~   95 (169)
T PHA02741         16 EKNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINAQEM   95 (169)
T ss_pred             ccccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCCCCc
Confidence            345677888888888888888887753      357778888888888888888887    5788888888888888874


Q ss_pred             -CCCcHhHHHHhcCCHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCC
Q psy3308         706 -NGLTPLHLCAQEDKVNVATITMF-NGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANV  766 (838)
Q Consensus       706 -~~~t~l~~A~~~g~~~i~~~L~~-~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~  766 (838)
                       .|.||||+|+..++.+++++|+. .|++++..+..|+|||++|+..|+.+++++|++.++..
T Consensus        96 ~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~~g~tpL~~A~~~~~~~iv~~L~~~~~~~  158 (169)
T PHA02741         96 LEGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNADNKSPFELAIDNEDVAMMQILREIVATS  158 (169)
T ss_pred             CCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHh
Confidence             78889999998888898888887 58888888888999999999999999999988875543


No 63 
>KOG0512|consensus
Probab=99.82  E-value=1.7e-19  Score=148.65  Aligned_cols=138  Identities=28%  Similarity=0.384  Sum_probs=89.1

Q ss_pred             HHHHHHcCcHHHHHHHHhCCC-CCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHH
Q psy3308         678 LHLSAQEGHTDMSSLLIEHGA-TVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMV  756 (838)
Q Consensus       678 L~~A~~~g~~~iv~~Ll~~g~-~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v  756 (838)
                      +.+|+..+....|+.|++..+ .+|.+|..|.||||.|+.+|+++|+..|+..|++++.+...|+||||-|++..+.+++
T Consensus        67 ~lwaae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~~GWTPLhSAckWnN~~va  146 (228)
T KOG0512|consen   67 LLWAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKTNEGWTPLHSACKWNNFEVA  146 (228)
T ss_pred             HHHHHhhccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCCcccccccCccchhhhhcccchhHH
Confidence            345666666666665555433 3566666666666666666666666666666666666666677777777777777777


Q ss_pred             HHHHHCCCCCccCCCCCCcHHHHHHHhCc-HHHHHHHHhC-CCCCCCCCCccch-HHHHHHc
Q psy3308         757 RYLVENGANVNATTNLGYTPLHQASQQGR-VLIIDLLLGA-GAQPNATTNLFCC-ATILVKN  815 (838)
Q Consensus       757 ~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~-~~~v~~Ll~~-ga~~~~~~~~~~~-~~~~~~~  815 (838)
                      .+|+.+|+|+|...+...||||.|+.+.+ ...+++|+.. +.+|-..++.+.| +++|.+-
T Consensus       147 ~~LLqhgaDVnA~t~g~ltpLhlaa~~rn~r~t~~~Ll~dryi~pg~~nn~eeta~~iARRT  208 (228)
T KOG0512|consen  147 GRLLQHGADVNAQTKGLLTPLHLAAGNRNSRDTLELLLHDRYIHPGLKNNLEETAFDIARRT  208 (228)
T ss_pred             HHHHhccCcccccccccchhhHHhhcccchHHHHHHHhhccccChhhhcCccchHHHHHHHh
Confidence            77777777777766666677777765543 3445555543 6666666677777 6666554


No 64 
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.81  E-value=4.1e-19  Score=171.87  Aligned_cols=146  Identities=23%  Similarity=0.277  Sum_probs=91.2

Q ss_pred             HHHHHHHcCCHHHHHHHHhCCCCCCccC----CCCChHHHHHHHcCcHHHHHHHHhCCCCCCCC-CCCCCcHHHHHHHcC
Q psy3308         611 PLHVASHYDHQNVALLLLDRGASPHAVA----KNGYTPLHIAAKKNQMDIATTLLEYNAKPNAE-SKAGFTPLHLSAQEG  685 (838)
Q Consensus       611 ~l~~A~~~~~~~~v~~Ll~~g~~~~~~~----~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~-~~~g~t~L~~A~~~g  685 (838)
                      +|+.|+..++.+++++|+++|++++..+    ..|.||||.|+..++.+++++|+++|++++.. +..|.||||.|+..|
T Consensus        36 lL~~A~~~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g~TpLh~Aa~~~  115 (300)
T PHA02884         36 ILYSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAKITPLYISVLHG  115 (300)
T ss_pred             HHHHHHHcCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCCCCHHHHHHHcC
Confidence            4455555566666666666666666542    35666677666666666777776666666664 345666777776666


Q ss_pred             cHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCC
Q psy3308         686 HTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGA  764 (838)
Q Consensus       686 ~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~  764 (838)
                      +.+++++|+++|++++.++..|.||||+|++.++.+++..+.  |..   .+..+.+|++++   ++.+++++|+.+++
T Consensus       116 ~~eivklLL~~GAdin~kd~~G~TpL~~A~~~~~~~~~~~~~--~~~---~~~~~~~~~~~~---~n~ei~~~Lish~v  186 (300)
T PHA02884        116 CLKCLEILLSYGADINIQTNDMVTPIELALMICNNFLAFMIC--DNE---ISNFYKHPKKIL---INFDILKILVSHFI  186 (300)
T ss_pred             CHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCChhHHHHhc--CCc---ccccccChhhhh---ccHHHHHHHHHHHH
Confidence            777777777777766666666667777776666666554443  211   334445566643   35677777776655


No 65 
>PF12796 Ank_2:  Ankyrin repeats (3 copies);  InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it.  The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.78  E-value=1.7e-18  Score=139.01  Aligned_cols=89  Identities=38%  Similarity=0.618  Sum_probs=80.4

Q ss_pred             hHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHH
Q psy3308         711 LHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIID  790 (838)
Q Consensus       711 l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~  790 (838)
                      ||.|++.|+.+++++|++.+.+++.    |+||||+|+..|+.+++++|+++|++++..|..|+||||+|+.+|+.++++
T Consensus         1 L~~A~~~~~~~~~~~ll~~~~~~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~   76 (89)
T PF12796_consen    1 LHIAAQNGNLEILKFLLEKGADINL----GNTALHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAENGNLEIVK   76 (89)
T ss_dssp             HHHHHHTTTHHHHHHHHHTTSTTTS----SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTHHHHHH
T ss_pred             CHHHHHcCCHHHHHHHHHCcCCCCC----CCCHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHcCCHHHHH
Confidence            6889999999999999998888766    889999999999999999999999999999999999999999999999999


Q ss_pred             HHHhCCCCCCCCC
Q psy3308         791 LLLGAGAQPNATT  803 (838)
Q Consensus       791 ~Ll~~ga~~~~~~  803 (838)
                      +|+++|++++.+|
T Consensus        77 ~Ll~~g~~~~~~n   89 (89)
T PF12796_consen   77 LLLEHGADVNIRN   89 (89)
T ss_dssp             HHHHTTT-TTSS-
T ss_pred             HHHHcCCCCCCcC
Confidence            9999999999886


No 66 
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.78  E-value=1.1e-18  Score=156.47  Aligned_cols=129  Identities=22%  Similarity=0.260  Sum_probs=97.5

Q ss_pred             cCCCCChHHHHHHHcCcHHHHHHHHhCC--CC-----CCCCCCCCCcHHHHHHHcCcH---HHHHHHHhCCCCCCCCC-C
Q psy3308         637 VAKNGYTPLHIAAKKNQMDIATTLLEYN--AK-----PNAESKAGFTPLHLSAQEGHT---DMSSLLIEHGATVSHQA-K  705 (838)
Q Consensus       637 ~~~~~~t~L~~A~~~~~~~iv~~Ll~~~--~~-----~~~~~~~g~t~L~~A~~~g~~---~iv~~Ll~~g~~~~~~~-~  705 (838)
                      .+..|.||||+|+..|+.  ++.+...+  .+     ++.++..|+||||+|+..|+.   +++++|++.|++++.++ .
T Consensus        13 ~d~~g~tpLh~A~~~g~~--~~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~~~~~   90 (154)
T PHA02736         13 PDIEGENILHYLCRNGGV--TDLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADINGKERV   90 (154)
T ss_pred             cCCCCCCHHHHHHHhCCH--HHHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcCCCccccCCC
Confidence            445566666666666653  22221111  11     223567788888888888876   46788888898888887 4


Q ss_pred             CCCcHhHHHHhcCCHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCc
Q psy3308         706 NGLTPLHLCAQEDKVNVATITMF-NGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVN  767 (838)
Q Consensus       706 ~~~t~l~~A~~~g~~~i~~~L~~-~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~  767 (838)
                      .|.||||+|+..|+.+++++|+. .|++++.++..|+|||++|+..|+.+++++|+++|++++
T Consensus        91 ~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tpL~~A~~~~~~~i~~~Ll~~ga~~~  153 (154)
T PHA02736         91 FGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPYYVACERHDAKMMNILRAKGAQCK  153 (154)
T ss_pred             CCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence            88899999999999999998887 488888888899999999999999999999999888765


No 67 
>KOG0512|consensus
Probab=99.78  E-value=3.1e-18  Score=141.22  Aligned_cols=141  Identities=29%  Similarity=0.390  Sum_probs=106.9

Q ss_pred             HHHHHHHcCcHHHHHHHHhCCCC-CCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHH
Q psy3308         644 PLHIAAKKNQMDIATTLLEYNAK-PNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNV  722 (838)
Q Consensus       644 ~L~~A~~~~~~~iv~~Ll~~~~~-~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i  722 (838)
                      .+.+|+..+.+..|+.|++..++ +|.+|.+|.||||.|+.+||.+||+.|+..|++++.+...|+||||.|+...+.++
T Consensus        66 l~lwaae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~~GWTPLhSAckWnN~~v  145 (228)
T KOG0512|consen   66 LLLWAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKTNEGWTPLHSACKWNNFEV  145 (228)
T ss_pred             HHHHHHhhccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCCcccccccCccchhhhhcccchhH
Confidence            35567777778888877775544 67778888888888888888888888888888888888888888888888888888


Q ss_pred             HHHHHhCCCCCCCCCCCCCcHHHHHHHcCC-HHHHHHHHH-CCCCCccCCCCCCcHHHHHHHhC
Q psy3308         723 ATITMFNGAEIDPVTKAGFTPLHIASHFGQ-LNMVRYLVE-NGANVNATTNLGYTPLHQASQQG  784 (838)
Q Consensus       723 ~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~-~~~v~~Ll~-~g~~~~~~~~~g~t~l~~A~~~~  784 (838)
                      +-+|+.+|+++|.+.....||||.|+...+ ...+.+|+. .+.++..+++.+.||++.|-+.+
T Consensus       146 a~~LLqhgaDVnA~t~g~ltpLhlaa~~rn~r~t~~~Ll~dryi~pg~~nn~eeta~~iARRT~  209 (228)
T KOG0512|consen  146 AGRLLQHGADVNAQTKGLLTPLHLAAGNRNSRDTLELLLHDRYIHPGLKNNLEETAFDIARRTS  209 (228)
T ss_pred             HHHHHhccCcccccccccchhhHHhhcccchHHHHHHHhhccccChhhhcCccchHHHHHHHhh
Confidence            888888888888877777788888876654 344455444 36777778888888888887764


No 68 
>KOG0195|consensus
Probab=99.73  E-value=1.2e-17  Score=149.67  Aligned_cols=144  Identities=30%  Similarity=0.474  Sum_probs=117.0

Q ss_pred             HHHhCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCC
Q psy3308         659 TLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTK  738 (838)
Q Consensus       659 ~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~  738 (838)
                      ||-+..-|.|.-|..|.+|||+|++.|+..+|+.|+..|+.+|..+....||||+|+..||-++|..|++..+++|..+.
T Consensus        19 wld~tehdln~gddhgfsplhwaakegh~aivemll~rgarvn~tnmgddtplhlaaahghrdivqkll~~kadvnavne   98 (448)
T KOG0195|consen   19 WLDDTEHDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGARVNSTNMGDDTPLHLAAAHGHRDIVQKLLSRKADVNAVNE   98 (448)
T ss_pred             EecCcccccccccccCcchhhhhhhcccHHHHHHHHhcccccccccCCCCcchhhhhhcccHHHHHHHHHHhcccchhhc
Confidence            34445556777788888888888888888888888888888888888888888888888888888888888888888888


Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCCCC
Q psy3308         739 AGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNAT  802 (838)
Q Consensus       739 ~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ga~~~~~  802 (838)
                      +|.||||||+..|...+++-|+..|+-+++.+++|.|||..|--.-.--+.+..-++|-.+|..
T Consensus        99 hgntplhyacfwgydqiaedli~~ga~v~icnk~g~tpldkakp~l~~~l~e~aek~gq~~nri  162 (448)
T KOG0195|consen   99 HGNTPLHYACFWGYDQIAEDLISCGAAVNICNKKGMTPLDKAKPMLKNTLLEIAEKHGQSPNRI  162 (448)
T ss_pred             cCCCchhhhhhhcHHHHHHHHHhccceeeecccCCCCchhhhchHHHHHHHHHHHHhCCCCCcc
Confidence            8999999999999888889999999998888888999988876544444444444668777753


No 69 
>PF12796 Ank_2:  Ankyrin repeats (3 copies);  InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it.  The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.73  E-value=4.3e-17  Score=130.79  Aligned_cols=88  Identities=35%  Similarity=0.622  Sum_probs=68.8

Q ss_pred             HHHHHHcCcHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcHHHHHHHcCCHHHHH
Q psy3308          99 LYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVID  178 (838)
Q Consensus        99 l~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~~l~~Aa~~g~~~iv~~L~~~~~~~~~~~~~~~tal~~A~~~g~~~iv~  178 (838)
                      ||+||+.|+++++++|++.+.+++.    |.||||+||.+|+.+++++|+++|++++.++..|.||||+|+.+|+.++++
T Consensus         1 L~~A~~~~~~~~~~~ll~~~~~~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~   76 (89)
T PF12796_consen    1 LHIAAQNGNLEILKFLLEKGADINL----GNTALHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAENGNLEIVK   76 (89)
T ss_dssp             HHHHHHTTTHHHHHHHHHTTSTTTS----SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTHHHHHH
T ss_pred             CHHHHHcCCHHHHHHHHHCcCCCCC----CCCHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHcCCHHHHH
Confidence            6788888888888888887766554    677888888888888888888888888888888888888888888888888


Q ss_pred             HHHHcCCCccCC
Q psy3308         179 ILIEKGAALYSK  190 (838)
Q Consensus       179 ~L~~~~~~~~~~  190 (838)
                      +|+++|++++.+
T Consensus        77 ~Ll~~g~~~~~~   88 (89)
T PF12796_consen   77 LLLEHGADVNIR   88 (89)
T ss_dssp             HHHHTTT-TTSS
T ss_pred             HHHHcCCCCCCc
Confidence            888888776543


No 70 
>KOG0195|consensus
Probab=99.71  E-value=3.8e-17  Score=146.55  Aligned_cols=123  Identities=37%  Similarity=0.524  Sum_probs=109.6

Q ss_pred             HHHHCCCCcccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccC
Q psy3308          80 ILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTR  159 (838)
Q Consensus        80 ~l~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~~l~~Aa~~g~~~iv~~L~~~~~~~~~~~~  159 (838)
                      ||-+...|.|.-|..|.+|||+||+.|+..+|+.|+.+|+.+|.++....||||+||.+||-+||+.|++..+++|..+.
T Consensus        19 wld~tehdln~gddhgfsplhwaakegh~aivemll~rgarvn~tnmgddtplhlaaahghrdivqkll~~kadvnavne   98 (448)
T KOG0195|consen   19 WLDDTEHDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGARVNSTNMGDDTPLHLAAAHGHRDIVQKLLSRKADVNAVNE   98 (448)
T ss_pred             EecCcccccccccccCcchhhhhhhcccHHHHHHHHhcccccccccCCCCcchhhhhhcccHHHHHHHHHHhcccchhhc
Confidence            44455667788888999999999999999999999999999998888888999999999999999999999999999999


Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCccHHHHHH
Q psy3308         160 DGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMAS  202 (838)
Q Consensus       160 ~~~tal~~A~~~g~~~iv~~L~~~~~~~~~~~~~~~~~l~~A~  202 (838)
                      .|.||||+||-.|...|.+-|+..|+.++..++.|.+|++.|-
T Consensus        99 hgntplhyacfwgydqiaedli~~ga~v~icnk~g~tpldkak  141 (448)
T KOG0195|consen   99 HGNTPLHYACFWGYDQIAEDLISCGAAVNICNKKGMTPLDKAK  141 (448)
T ss_pred             cCCCchhhhhhhcHHHHHHHHHhccceeeecccCCCCchhhhc
Confidence            9999999999999999999999999998888888999988874


No 71 
>cd00204 ANK ankyrin repeats;  ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.69  E-value=5.7e-16  Score=135.16  Aligned_cols=124  Identities=40%  Similarity=0.723  Sum_probs=99.8

Q ss_pred             CCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHH
Q psy3308         670 ESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASH  749 (838)
Q Consensus       670 ~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~  749 (838)
                      .+..|.|||++|+..++.+++++|++.+.+.+..+..|.+|++.|+..++.+++++|+.++..++..+..|.||+|+|+.
T Consensus         3 ~~~~g~t~l~~a~~~~~~~~i~~li~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~l~~a~~   82 (126)
T cd00204           3 RDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGNTPLHLAAR   82 (126)
T ss_pred             cCcCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHH
Confidence            34567788888888888888888888877777777778888888888888888888888887777777778888888888


Q ss_pred             cCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHHHH
Q psy3308         750 FGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLL  793 (838)
Q Consensus       750 ~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll  793 (838)
                      .++.+++++|+++|.+++..+..|.||+++|...++.+++++|+
T Consensus        83 ~~~~~~~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll  126 (126)
T cd00204          83 NGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGHLEVVKLLL  126 (126)
T ss_pred             cCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCHHHHHHhC
Confidence            88888888888888888888888888888888888888888774


No 72 
>KOG3676|consensus
Probab=99.69  E-value=2.3e-16  Score=163.80  Aligned_cols=123  Identities=25%  Similarity=0.352  Sum_probs=100.7

Q ss_pred             CCCcHHHHHHHcCcHHHHHHHHhCCCCCCCC-----------------------CCCCCcHhHHHHhcCCHHHHHHHHhC
Q psy3308         673 AGFTPLHLSAQEGHTDMSSLLIEHGATVSHQ-----------------------AKNGLTPLHLCAQEDKVNVATITMFN  729 (838)
Q Consensus       673 ~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~-----------------------~~~~~t~l~~A~~~g~~~i~~~L~~~  729 (838)
                      .|.||||.|+.+.+.++|++|++.||||+.+                       --.|..||-+||.-++.+|+++|+++
T Consensus       183 ~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~  262 (782)
T KOG3676|consen  183 YGQSALHIAIVNRDAELVRLLLAAGADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLAH  262 (782)
T ss_pred             cCcchHHHHHHhccHHHHHHHHHcCCchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHhc
Confidence            4455555555555555555555555554432                       12467899999999999999999999


Q ss_pred             CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCC--CccCCCCCCcHHHHHHHhCcHHHHHHHHhC
Q psy3308         730 GAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGAN--VNATTNLGYTPLHQASQQGRVLIIDLLLGA  795 (838)
Q Consensus       730 ~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~--~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~  795 (838)
                      |+|++.+|..|.|.||..+..-..+|-.+++++|++  ..+.++.|.|||.+|+..|+.+|.+.+++.
T Consensus       263 gAd~~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~~l~~v~N~qgLTPLtLAaklGk~emf~~ile~  330 (782)
T KOG3676|consen  263 GADPNAQDSNGNTVLHMLVIHFVTEMYDLALELGANALEHVRNNQGLTPLTLAAKLGKKEMFQHILER  330 (782)
T ss_pred             CCCCCccccCCChHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCChHHHHHHhhhHHHHHHHHHh
Confidence            999999999999999999999899999999999999  888999999999999999999999999987


No 73 
>KOG4214|consensus
Probab=99.68  E-value=2e-16  Score=115.36  Aligned_cols=103  Identities=24%  Similarity=0.394  Sum_probs=86.5

Q ss_pred             cHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHH
Q psy3308         709 TPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLI  788 (838)
Q Consensus       709 t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~  788 (838)
                      ..+.+++++|.++-|+-.+..|.++|..- .|++|||+|+-+|++++++||+..|++++.+|+.|.|||..|+-.||.+|
T Consensus         4 ~~~~W~vkNG~~DeVk~~v~~g~nVn~~~-ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKygITPLLsAvwEGH~~c   82 (117)
T KOG4214|consen    4 MSVAWNVKNGEIDEVKQSVNEGLNVNEIY-GGRTPLHYAADYGQLSILEFLISIGANIQDKDKYGITPLLSAVWEGHRDC   82 (117)
T ss_pred             hhHhhhhccCcHHHHHHHHHccccHHHHh-CCcccchHhhhcchHHHHHHHHHhccccCCccccCCcHHHHHHHHhhHHH
Confidence            34677888888888887777777776554 78899999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhCCCCCCCCCCccchHHHH
Q psy3308         789 IDLLLGAGAQPNATTNLFCCATIL  812 (838)
Q Consensus       789 v~~Ll~~ga~~~~~~~~~~~~~~~  812 (838)
                      |++|+++|||..++.-+|+++--|
T Consensus        83 VklLL~~GAdrt~~~PdG~~~~ea  106 (117)
T KOG4214|consen   83 VKLLLQNGADRTIHAPDGTALIEA  106 (117)
T ss_pred             HHHHHHcCcccceeCCCchhHHhh
Confidence            999999999999888888884333


No 74 
>KOG3676|consensus
Probab=99.66  E-value=1.5e-15  Score=157.82  Aligned_cols=208  Identities=25%  Similarity=0.300  Sum_probs=166.7

Q ss_pred             cHHHHHHHcCcHHHHHHHHhCC---------CCCCCCCCCCCcHHHHHHHc---CCHHHHHHHHhCCCC-CC---cc-CC
Q psy3308         577 TPLHLAAKYGRMKIAQMLLQKD---------APVDSQGKNGVTPLHVASHY---DHQNVALLLLDRGAS-PH---AV-AK  639 (838)
Q Consensus       577 ~~l~~a~~~~~~~~v~~Ll~~~---------~~~~~~~~~~~~~l~~A~~~---~~~~~v~~Ll~~g~~-~~---~~-~~  639 (838)
                      .++..+...+..+....+...+         .+++.+...|.|.||.|..+   ++.++++.|++.-.. +|   .. .-
T Consensus       103 ~~~~~~~~~~~l~~l~~l~~~~~~~k~r~~~w~~~~RGa~GET~Lh~~lL~~~~~~n~la~~LL~~~p~lind~~~~eeY  182 (782)
T KOG3676|consen  103 DALFIADSEGALSDLDGLLKFLRKSKYRLTDWKLNERGATGETLLHKALLNLSDGHNELARVLLEIFPKLINDIYTSEEY  182 (782)
T ss_pred             hhhhhccccccHHHHhccchhhhhhhhhhhhhccccccchhhhHHHHHHhcCchhHHHHHHHHHHHhHHHhhhhhhhHhh
Confidence            4566666677776666665544         56777788999999999874   455888888875221 11   11 23


Q ss_pred             CCChHHHHHHHcCcHHHHHHHHhCCCCCCCC---------CC--------------CCCcHHHHHHHcCcHHHHHHHHhC
Q psy3308         640 NGYTPLHIAAKKNQMDIATTLLEYNAKPNAE---------SK--------------AGFTPLHLSAQEGHTDMSSLLIEH  696 (838)
Q Consensus       640 ~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~---------~~--------------~g~t~L~~A~~~g~~~iv~~Ll~~  696 (838)
                      .|.||||+|+.+.+.++|++|++.|+|++.+         |.              -|..||-+|+..++.||+++|+++
T Consensus       183 ~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~  262 (782)
T KOG3676|consen  183 YGQSALHIAIVNRDAELVRLLLAAGADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLAH  262 (782)
T ss_pred             cCcchHHHHHHhccHHHHHHHHHcCCchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHhc
Confidence            6899999999999999999999999998766         11              257899999999999999999999


Q ss_pred             CCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCC--CCCCCCCCCcHHHHHHHcCCHHHHHHHHHC-C----------
Q psy3308         697 GATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAE--IDPVTKAGFTPLHIASHFGQLNMVRYLVEN-G----------  763 (838)
Q Consensus       697 g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~--~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~-g----------  763 (838)
                      |+|++.+|..|.|.||..+..-..++...+++.|+.  ...++..|-|||..|++-|+.+|.+.+++. +          
T Consensus       263 gAd~~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~~l~~v~N~qgLTPLtLAaklGk~emf~~ile~~k~~~W~YGpvt  342 (782)
T KOG3676|consen  263 GADPNAQDSNGNTVLHMLVIHFVTEMYDLALELGANALEHVRNNQGLTPLTLAAKLGKKEMFQHILERRKFTDWAYGPVT  342 (782)
T ss_pred             CCCCCccccCCChHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCChHHHHHHhhhHHHHHHHHHhhcccceeecccc
Confidence            999999999999999999999888999999999999  778899999999999999999999999997 2          


Q ss_pred             ---CCCccCCCC--CCcHHHHHHHhC
Q psy3308         764 ---ANVNATTNL--GYTPLHQASQQG  784 (838)
Q Consensus       764 ---~~~~~~~~~--g~t~l~~A~~~~  784 (838)
                         .+++..|..  -.++|...+.+.
T Consensus       343 sslYpL~~iDT~~n~~SvLeivvyg~  368 (782)
T KOG3676|consen  343 SSLYPLNSIDTIGNENSVLEIVVYGI  368 (782)
T ss_pred             cccccchhcccccchhhhhhhhhcCC
Confidence               344555543  356777777553


No 75 
>cd00204 ANK ankyrin repeats;  ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.66  E-value=2.4e-15  Score=131.21  Aligned_cols=124  Identities=39%  Similarity=0.685  Sum_probs=105.1

Q ss_pred             CCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcHHHHHHH
Q psy3308          91 QSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAAR  170 (838)
Q Consensus        91 ~~~~~~t~l~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~~l~~Aa~~g~~~iv~~L~~~~~~~~~~~~~~~tal~~A~~  170 (838)
                      ++..|.|||++|+..|+.+++++|++++...+..+..|.+||+.|+..++.+++++|++.+..++..+..+.||+++|+.
T Consensus         3 ~~~~g~t~l~~a~~~~~~~~i~~li~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~l~~a~~   82 (126)
T cd00204           3 RDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGNTPLHLAAR   82 (126)
T ss_pred             cCcCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHH
Confidence            45678899999999999999999999888777788888899999999999999999999887777788888899999999


Q ss_pred             cCCHHHHHHHHHcCCCccCCCCCCccHHHHHHhCCcHHHHHHHH
Q psy3308         171 SGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLI  214 (838)
Q Consensus       171 ~g~~~iv~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~L~  214 (838)
                      .++.+++++|++++.+.+..+..+.++++.|+..++.+++++|+
T Consensus        83 ~~~~~~~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll  126 (126)
T cd00204          83 NGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGHLEVVKLLL  126 (126)
T ss_pred             cCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCHHHHHHhC
Confidence            99999999998888777777777788888888888888887763


No 76 
>KOG4214|consensus
Probab=99.59  E-value=5.3e-15  Score=108.08  Aligned_cols=103  Identities=25%  Similarity=0.358  Sum_probs=84.7

Q ss_pred             cHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHH
Q psy3308         676 TPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNM  755 (838)
Q Consensus       676 t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~  755 (838)
                      ..+.+++++|.++-|+-....|.++|..- .|++|||+|+-.|.++++++|+..|++++.+|.+|-|||..|+-.||.+|
T Consensus         4 ~~~~W~vkNG~~DeVk~~v~~g~nVn~~~-ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKygITPLLsAvwEGH~~c   82 (117)
T KOG4214|consen    4 MSVAWNVKNGEIDEVKQSVNEGLNVNEIY-GGRTPLHYAADYGQLSILEFLISIGANIQDKDKYGITPLLSAVWEGHRDC   82 (117)
T ss_pred             hhHhhhhccCcHHHHHHHHHccccHHHHh-CCcccchHhhhcchHHHHHHHHHhccccCCccccCCcHHHHHHHHhhHHH
Confidence            34667888888888888888887777654 78888888888888888888888888888888888899888888899999


Q ss_pred             HHHHHHCCCCCccCCCCCCcHHHH
Q psy3308         756 VRYLVENGANVNATTNLGYTPLHQ  779 (838)
Q Consensus       756 v~~Ll~~g~~~~~~~~~g~t~l~~  779 (838)
                      |++|+.+|++-.....+|.+.+..
T Consensus        83 VklLL~~GAdrt~~~PdG~~~~ea  106 (117)
T KOG4214|consen   83 VKLLLQNGADRTIHAPDGTALIEA  106 (117)
T ss_pred             HHHHHHcCcccceeCCCchhHHhh
Confidence            999999888887777777765543


No 77 
>PF13637 Ank_4:  Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.46  E-value=1.6e-13  Score=96.87  Aligned_cols=54  Identities=46%  Similarity=0.767  Sum_probs=42.8

Q ss_pred             CCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHHHH
Q psy3308         740 GFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLL  793 (838)
Q Consensus       740 g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll  793 (838)
                      |+||||+|+..|+.+++++|+++|+++|..|.+|+||||+|+.+|+.+++++|+
T Consensus         1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll   54 (54)
T PF13637_consen    1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFLL   54 (54)
T ss_dssp             SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred             CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence            678999999999999999999999999999888999999999999999999886


No 78 
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.46  E-value=7.2e-13  Score=130.16  Aligned_cols=126  Identities=36%  Similarity=0.564  Sum_probs=96.9

Q ss_pred             CCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCC-----HHHHHHHHhCCC---CCCCCCCCCCc
Q psy3308         671 SKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDK-----VNVATITMFNGA---EIDPVTKAGFT  742 (838)
Q Consensus       671 ~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~-----~~i~~~L~~~~~---~~~~~~~~g~t  742 (838)
                      +..+.++++.+...+..+++++|+..|++++.++..|.||||.|+..++     .++++.|++.|+   ..+.++..|.|
T Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~g~t  149 (235)
T COG0666          70 DLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDEDGNT  149 (235)
T ss_pred             CccccCHHHHHHHcCcHHHHHHHHHcCCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCCCCCc
Confidence            3345566666666666666666666666666666666777777776666     777777777777   45556888888


Q ss_pred             HHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCC
Q psy3308         743 PLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAG  796 (838)
Q Consensus       743 ~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~g  796 (838)
                      |||+|+..|+.+++++|++.|++++..+..|.||++.|+..++.+++++|++.+
T Consensus       150 pl~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~l~~~~  203 (235)
T COG0666         150 PLHWAALNGDADIVELLLEAGADPNSRNSYGVTALDPAAKNGRIELVKLLLDKG  203 (235)
T ss_pred             hhHHHHHcCchHHHHHHHhcCCCCcccccCCCcchhhhcccchHHHHHHHHhcC
Confidence            888888888888888888888888888888888888888888888888888876


No 79 
>KOG1710|consensus
Probab=99.46  E-value=4.5e-13  Score=120.77  Aligned_cols=116  Identities=20%  Similarity=0.326  Sum_probs=55.7

Q ss_pred             cHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCC-CCCCCCcHHHHHHHcCCHH
Q psy3308         676 TPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDP-VTKAGFTPLHIASHFGQLN  754 (838)
Q Consensus       676 t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~-~~~~g~t~l~~A~~~g~~~  754 (838)
                      .+|..++..|..+-..-|++---++|.+|..|+++|.+|+.+|+.++++.|++.|+|+|- ++..+.||||+|+..|+.+
T Consensus        14 ~~Lle~i~Kndt~~a~~LLs~vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALSGn~d   93 (396)
T KOG1710|consen   14 SPLLEAIDKNDTEAALALLSTVRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALSGNQD   93 (396)
T ss_pred             hHHHHHHccCcHHHHHHHHHHhhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHcCCch
Confidence            344444444444444444443333444444444555555555555555555555544442 3344455555555555555


Q ss_pred             HHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHH
Q psy3308         755 MVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDL  791 (838)
Q Consensus       755 ~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~  791 (838)
                      +.++|++.|+.+...+.-|+||-..|+.-|+.++|..
T Consensus        94 vcrllldaGa~~~~vNsvgrTAaqmAAFVG~H~CV~i  130 (396)
T KOG1710|consen   94 VCRLLLDAGARMYLVNSVGRTAAQMAAFVGHHECVAI  130 (396)
T ss_pred             HHHHHHhccCccccccchhhhHHHHHHHhcchHHHHH
Confidence            5555555555555555555555555555555444443


No 80 
>PF13857 Ank_5:  Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.41  E-value=2.4e-13  Score=96.10  Aligned_cols=55  Identities=44%  Similarity=0.681  Sum_probs=23.5

Q ss_pred             HHhCC-CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHH
Q psy3308         726 TMFNG-AEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQA  780 (838)
Q Consensus       726 L~~~~-~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A  780 (838)
                      |+++| .+++.+|..|+||||+|+..|+.++|++|++.|++++.+|..|+|||++|
T Consensus         1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A   56 (56)
T PF13857_consen    1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA   56 (56)
T ss_dssp             -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred             CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence            34445 56666666666666666666666666666666666666666666666665


No 81 
>PF13637 Ank_4:  Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.39  E-value=9e-13  Score=92.96  Aligned_cols=52  Identities=37%  Similarity=0.528  Sum_probs=23.6

Q ss_pred             CcHHHHHHHcCcHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHH
Q psy3308          96 FTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELL  147 (838)
Q Consensus        96 ~t~l~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~~l~~Aa~~g~~~iv~~L  147 (838)
                      +||||+||..|+.+++++|+++|.+++.+|.+|.||||+|+.+|+++++++|
T Consensus         2 ~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~L   53 (54)
T PF13637_consen    2 RTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFL   53 (54)
T ss_dssp             SBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHH
T ss_pred             ChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHH
Confidence            4455555555555555555555555555555555555555555555555554


No 82 
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.39  E-value=4.4e-12  Score=124.54  Aligned_cols=128  Identities=31%  Similarity=0.524  Sum_probs=103.7

Q ss_pred             cCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCC-----HHHHHHHHHcCC---CCccccCCC
Q psy3308          90 VQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGK-----VAMVELLISKGA---NIEAKTRDG  161 (838)
Q Consensus        90 ~~~~~~~t~l~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~~l~~Aa~~g~-----~~iv~~L~~~~~---~~~~~~~~~  161 (838)
                      ..+..+.++++.|+..+..+++++++..+.+++..+..|.||||+|+.+|+     .+++++|++.|+   ..+.++..|
T Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~g  147 (235)
T COG0666          68 ARDLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDEDG  147 (235)
T ss_pred             cCCccccCHHHHHHHcCcHHHHHHHHHcCCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCCCC
Confidence            445567788888888888888888888888888888888888888888888     888888888888   555568888


Q ss_pred             CcHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCccHHHHHHhCCcHHHHHHHHhCC
Q psy3308         162 LTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHG  217 (838)
Q Consensus       162 ~tal~~A~~~g~~~iv~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~L~~~~  217 (838)
                      .||||+|+..|+.++++.|++.|++.+..+..|.|+++.|+..++.++++.+...+
T Consensus       148 ~tpl~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~l~~~~  203 (235)
T COG0666         148 NTPLHWAALNGDADIVELLLEAGADPNSRNSYGVTALDPAAKNGRIELVKLLLDKG  203 (235)
T ss_pred             CchhHHHHHcCchHHHHHHHhcCCCCcccccCCCcchhhhcccchHHHHHHHHhcC
Confidence            88888888888888888888888887777777888888888888888888777754


No 83 
>KOG0515|consensus
Probab=99.38  E-value=1.3e-12  Score=127.77  Aligned_cols=116  Identities=27%  Similarity=0.331  Sum_probs=81.6

Q ss_pred             HHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHH
Q psy3308         679 HLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRY  758 (838)
Q Consensus       679 ~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~  758 (838)
                      .-|+..|-+|+|+-.+..--|+...+..|.|+||.|+..||.+||+||++.|+++|..|.+||||||+|+.++++.|++.
T Consensus       555 LDaaLeGEldlVq~~i~ev~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCNnv~~ckq  634 (752)
T KOG0515|consen  555 LDAALEGELDLVQRIIYEVTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCNNVPMCKQ  634 (752)
T ss_pred             HhhhhcchHHHHHHHHHhhcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcCchHHHHH
Confidence            34666777777777776666666667777777777777777777777777777777777777777777777777777777


Q ss_pred             HHHCCCCCccCCC-CCCcHHHHHH--HhCcHHHHHHHHh
Q psy3308         759 LVENGANVNATTN-LGYTPLHQAS--QQGRVLIIDLLLG  794 (838)
Q Consensus       759 Ll~~g~~~~~~~~-~g~t~l~~A~--~~~~~~~v~~Ll~  794 (838)
                      |++.|+-+-..+. ++.||..---  +.|..+|.+||..
T Consensus       635 LVe~GaavfAsTlSDmeTa~eKCee~eeGY~~CsqyL~~  673 (752)
T KOG0515|consen  635 LVESGAAVFASTLSDMETAAEKCEEMEEGYDQCSQYLYG  673 (752)
T ss_pred             HHhccceEEeeecccccchhhhcchhhhhHHHHHHHHHH
Confidence            7777776655443 4566654332  3467777777763


No 84 
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.38  E-value=2.1e-12  Score=143.06  Aligned_cols=99  Identities=30%  Similarity=0.309  Sum_probs=76.0

Q ss_pred             HhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHH
Q psy3308         710 PLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLII  789 (838)
Q Consensus       710 ~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v  789 (838)
                      .|+.|+..|+.++++.|+++|+++|.+|..|+||||+|+..|+.+++++|+++|++++..|..|.||||+|+..|+.+++
T Consensus        85 ~L~~aa~~G~~~~vk~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~iv  164 (664)
T PTZ00322         85 ELCQLAASGDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREVV  164 (664)
T ss_pred             HHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHH
Confidence            46777777777777777777777777777777777777777777777777777777777777777777777777777777


Q ss_pred             HHHHhC-------CCCCCCCCCccch
Q psy3308         790 DLLLGA-------GAQPNATTNLFCC  808 (838)
Q Consensus       790 ~~Ll~~-------ga~~~~~~~~~~~  808 (838)
                      ++|+++       |++++..+..|.+
T Consensus       165 ~~Ll~~~~~~~~~ga~~~~~~~~g~~  190 (664)
T PTZ00322        165 QLLSRHSQCHFELGANAKPDSFTGKP  190 (664)
T ss_pred             HHHHhCCCcccccCCCCCccccCCCC
Confidence            777777       7777777777766


No 85 
>KOG1710|consensus
Probab=99.36  E-value=4.8e-12  Score=114.22  Aligned_cols=119  Identities=26%  Similarity=0.308  Sum_probs=101.6

Q ss_pred             CcHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHcCcHHHHHHHHhCCCCCCCC-CCCCCcHHHHHHHcCcH
Q psy3308         609 VTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAE-SKAGFTPLHLSAQEGHT  687 (838)
Q Consensus       609 ~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~-~~~g~t~L~~A~~~g~~  687 (838)
                      ..||.-++..|..+-...|++.--.+|..|..|.++|..|+.+|++++|+.|++.|+|+|.. +..+.||||+|+.+|+.
T Consensus        13 ~~~Lle~i~Kndt~~a~~LLs~vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALSGn~   92 (396)
T KOG1710|consen   13 KSPLLEAIDKNDTEAALALLSTVRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALSGNQ   92 (396)
T ss_pred             hhHHHHHHccCcHHHHHHHHHHhhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHcCCc
Confidence            46888888888888888888876668888888999999999999999999999999988865 34567899999999999


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHH
Q psy3308         688 DMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITM  727 (838)
Q Consensus       688 ~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~  727 (838)
                      ++.++|++.|+.....+.-|+|+-..||.-|+.++|.++-
T Consensus        93 dvcrllldaGa~~~~vNsvgrTAaqmAAFVG~H~CV~iIN  132 (396)
T KOG1710|consen   93 DVCRLLLDAGARMYLVNSVGRTAAQMAAFVGHHECVAIIN  132 (396)
T ss_pred             hHHHHHHhccCccccccchhhhHHHHHHHhcchHHHHHHh
Confidence            9999999999888888888899999999999988888764


No 86 
>PF13857 Ank_5:  Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.33  E-value=1.4e-12  Score=92.15  Aligned_cols=54  Identities=41%  Similarity=0.539  Sum_probs=32.4

Q ss_pred             HHHCC-CCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCCCCCCccch-HHHH
Q psy3308         759 LVENG-ANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTNLFCC-ATIL  812 (838)
Q Consensus       759 Ll~~g-~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~-~~~~  812 (838)
                      |+++| ++++..|..|.||||+|+..|+.++|++|+++|+|++.+|..|+| +++|
T Consensus         1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A   56 (56)
T PF13857_consen    1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA   56 (56)
T ss_dssp             -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred             CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence            67888 899999999999999999999999999999999999999999999 9886


No 87 
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.32  E-value=7.6e-12  Score=138.73  Aligned_cols=106  Identities=30%  Similarity=0.382  Sum_probs=75.4

Q ss_pred             hHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHH
Q psy3308         643 TPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNV  722 (838)
Q Consensus       643 t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i  722 (838)
                      ..|+.|+..|+.++++.|++.|++++..|..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.++
T Consensus        84 ~~L~~aa~~G~~~~vk~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~i  163 (664)
T PTZ00322         84 VELCQLAASGDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREV  163 (664)
T ss_pred             HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHH
Confidence            45667777777777777777777777777777777777777777777777777777777777777777777777777777


Q ss_pred             HHHHHhC-------CCCCCCCCCCCCcHHHHHH
Q psy3308         723 ATITMFN-------GAEIDPVTKAGFTPLHIAS  748 (838)
Q Consensus       723 ~~~L~~~-------~~~~~~~~~~g~t~l~~A~  748 (838)
                      +++|+.+       |++++..+..|.+|+..+.
T Consensus       164 v~~Ll~~~~~~~~~ga~~~~~~~~g~~~~~~~~  196 (664)
T PTZ00322        164 VQLLSRHSQCHFELGANAKPDSFTGKPPSLEDS  196 (664)
T ss_pred             HHHHHhCCCcccccCCCCCccccCCCCccchhh
Confidence            7777766       6666666666666655443


No 88 
>KOG0515|consensus
Probab=99.30  E-value=8.7e-12  Score=122.18  Aligned_cols=91  Identities=35%  Similarity=0.508  Sum_probs=70.7

Q ss_pred             HHHHHHcCcHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcHHHHHHHcCCHHHHH
Q psy3308          99 LYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVID  178 (838)
Q Consensus        99 l~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~~l~~Aa~~g~~~iv~~L~~~~~~~~~~~~~~~tal~~A~~~g~~~iv~  178 (838)
                      |.-|+..|-+|+|+-.+..-.++...+..|.|+||.|+..||.+||+||+++|+++|..|.+|+||||.||..++..+++
T Consensus       554 LLDaaLeGEldlVq~~i~ev~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCNnv~~ck  633 (752)
T KOG0515|consen  554 LLDAALEGELDLVQRIIYEVTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCNNVPMCK  633 (752)
T ss_pred             HHhhhhcchHHHHHHHHHhhcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcCchHHHH
Confidence            44577778888888877777777777777888888888888888888888888888888888888888888888888888


Q ss_pred             HHHHcCCCccC
Q psy3308         179 ILIEKGAALYS  189 (838)
Q Consensus       179 ~L~~~~~~~~~  189 (838)
                      .|++.|+-+..
T Consensus       634 qLVe~GaavfA  644 (752)
T KOG0515|consen  634 QLVESGAAVFA  644 (752)
T ss_pred             HHHhccceEEe
Confidence            88887776543


No 89 
>PF13606 Ank_3:  Ankyrin repeat
Probab=98.88  E-value=2.7e-09  Score=63.28  Aligned_cols=29  Identities=45%  Similarity=0.669  Sum_probs=20.9

Q ss_pred             CCCcHHHHHHHhCcHHHHHHHHhCCCCCC
Q psy3308         772 LGYTPLHQASQQGRVLIIDLLLGAGAQPN  800 (838)
Q Consensus       772 ~g~t~l~~A~~~~~~~~v~~Ll~~ga~~~  800 (838)
                      +|+||||+|++.|++++|++|+++|+|+|
T Consensus         1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn   29 (30)
T PF13606_consen    1 NGNTPLHLAASNGNIEIVKYLLEHGADVN   29 (30)
T ss_pred             CCCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence            36777777777777777777777777766


No 90 
>KOG0783|consensus
Probab=98.86  E-value=1.3e-09  Score=113.19  Aligned_cols=81  Identities=27%  Similarity=0.355  Sum_probs=55.2

Q ss_pred             CCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCC-CCcHHHHHHHhCcHHHHHHHHhCCCCCCCCCCccch-HHH
Q psy3308         734 DPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNL-GYTPLHQASQQGRVLIIDLLLGAGAQPNATTNLFCC-ATI  811 (838)
Q Consensus       734 ~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~-g~t~l~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~-~~~  811 (838)
                      |..|..|+|+||.|+..+..++++||+++|++++.+|.+ |+||||-|+..|+++|+-+|+++|+...++|.+|.+ ++.
T Consensus        46 nikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~SL~i~Dkeglsplq~  125 (1267)
T KOG0783|consen   46 NIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKGRSLRIKDKEGLSPLQF  125 (1267)
T ss_pred             hHHHhhccceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhhhchHHHHHHHHhcCCceEEecccCCCHHHH
Confidence            456666677777777666667777777777777666653 667777777777777777777777777777777766 666


Q ss_pred             HHH
Q psy3308         812 LVK  814 (838)
Q Consensus       812 ~~~  814 (838)
                      ..+
T Consensus       126 ~~r  128 (1267)
T KOG0783|consen  126 LSR  128 (1267)
T ss_pred             Hhh
Confidence            555


No 91 
>KOG0506|consensus
Probab=98.85  E-value=2.9e-09  Score=103.53  Aligned_cols=94  Identities=18%  Similarity=0.310  Sum_probs=84.1

Q ss_pred             CCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHC-CCCCccCCCCCCcHHHHHHH
Q psy3308         704 AKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVEN-GANVNATTNLGYTPLHQASQ  782 (838)
Q Consensus       704 ~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~l~~A~~  782 (838)
                      +..+...+++|+..|.+..++.+.-.|.++...|.+.+|+||.|+..|+.++++||++. +.+++.+|.+|+|||.-|..
T Consensus       503 ~~~~~i~~~~aa~~GD~~alrRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~~  582 (622)
T KOG0506|consen  503 ENDTVINVMYAAKNGDLSALRRFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAKH  582 (622)
T ss_pred             cccchhhhhhhhhcCCHHHHHHHHHhcccccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhHh
Confidence            34566688999999999999988888999999999999999999999999999999997 88999999999999999999


Q ss_pred             hCcHHHHHHHHhCCC
Q psy3308         783 QGRVLIIDLLLGAGA  797 (838)
Q Consensus       783 ~~~~~~v~~Ll~~ga  797 (838)
                      .+|.+++++|-+.-.
T Consensus       583 F~h~~v~k~L~~~~~  597 (622)
T KOG0506|consen  583 FKHKEVVKLLEEAQY  597 (622)
T ss_pred             cCcHHHHHHHHHHhc
Confidence            999999999988644


No 92 
>PF00023 Ank:  Ankyrin repeat Hereditary spherocytosis;  InterPro: IPR002110  The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it.  The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.82  E-value=6.2e-09  Score=64.13  Aligned_cols=33  Identities=52%  Similarity=0.642  Sum_probs=22.9

Q ss_pred             CCCcHHHHHHHhCcHHHHHHHHhCCCCCCCCCC
Q psy3308         772 LGYTPLHQASQQGRVLIIDLLLGAGAQPNATTN  804 (838)
Q Consensus       772 ~g~t~l~~A~~~~~~~~v~~Ll~~ga~~~~~~~  804 (838)
                      +|+||||+|++.|+.+++++|+++|++++.+|+
T Consensus         1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~   33 (33)
T PF00023_consen    1 DGNTPLHYAAQRGHPDIVKLLLKHGADINARDN   33 (33)
T ss_dssp             TSBBHHHHHHHTTCHHHHHHHHHTTSCTTCBCT
T ss_pred             CcccHHHHHHHHHHHHHHHHHHHCcCCCCCCCC
Confidence            366777777777777777777777777776653


No 93 
>PF13606 Ank_3:  Ankyrin repeat
Probab=98.76  E-value=1.1e-08  Score=60.70  Aligned_cols=30  Identities=53%  Similarity=0.945  Sum_probs=25.7

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHHCCCCCcc
Q psy3308         739 AGFTPLHIASHFGQLNMVRYLVENGANVNA  768 (838)
Q Consensus       739 ~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~  768 (838)
                      +|+||||+|+..|+.++|++|+++|+|+|.
T Consensus         1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn~   30 (30)
T PF13606_consen    1 NGNTPLHLAASNGNIEIVKYLLEHGADVNA   30 (30)
T ss_pred             CCCCHHHHHHHhCCHHHHHHHHHcCCCCCC
Confidence            478899999999999999999999888863


No 94 
>KOG0782|consensus
Probab=98.72  E-value=3.5e-08  Score=98.15  Aligned_cols=117  Identities=22%  Similarity=0.291  Sum_probs=75.3

Q ss_pred             HHHHHHcCcHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHcCCC--CccccCCCCcHHHHHHHcCCHHH
Q psy3308          99 LYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGAN--IEAKTRDGLTPLHCAARSGHDNV  176 (838)
Q Consensus        99 l~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~~l~~Aa~~g~~~iv~~L~~~~~~--~~~~~~~~~tal~~A~~~g~~~i  176 (838)
                      +..|+..+.+=-++-+...|...-+.+.+..+.||+|++.|+-|||+|++++|..  .+..+..|.|+||.|+..++..+
T Consensus       870 il~av~~~D~~klqE~h~~gg~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r~v  949 (1004)
T KOG0782|consen  870 ILRAVLSSDLMKLQETHLNGGSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNRAV  949 (1004)
T ss_pred             HHHHHHhccHHHHHHHHhcCCceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchHH
Confidence            5556666655444444555555555566666677777777777777777776643  23445666777777777777777


Q ss_pred             HHHHHHcCCCccCCCCCCccHHHHHHhCCcHHHHHHHHh
Q psy3308         177 IDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIY  215 (838)
Q Consensus       177 v~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~L~~  215 (838)
                      .++|++.|+.+...|..|.||-.-|-+.|..++..||-.
T Consensus       950 c~~lvdagasl~ktd~kg~tp~eraqqa~d~dlaayle~  988 (1004)
T KOG0782|consen  950 CQLLVDAGASLRKTDSKGKTPQERAQQAGDPDLAAYLES  988 (1004)
T ss_pred             HHHHHhcchhheecccCCCChHHHHHhcCCchHHHHHhh
Confidence            777777777766666677777777777777777766643


No 95 
>KOG0783|consensus
Probab=98.69  E-value=1e-08  Score=106.84  Aligned_cols=83  Identities=27%  Similarity=0.449  Sum_probs=68.3

Q ss_pred             CCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCC-CCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHH
Q psy3308         667 PNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQA-KNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLH  745 (838)
Q Consensus       667 ~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~-~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~  745 (838)
                      .|++|..|+|+||.|+..+..++++||+++|++++.+| +.|+||||.|+..|+++++-.|+.+|..+..+|..|.+||.
T Consensus        45 anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~SL~i~Dkeglsplq  124 (1267)
T KOG0783|consen   45 ANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKGRSLRIKDKEGLSPLQ  124 (1267)
T ss_pred             hhHHHhhccceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhhhchHHHHHHHHhcCCceEEecccCCCHHH
Confidence            47778888888888888888888888888888888776 46888888888888888888888888888888888888888


Q ss_pred             HHHH
Q psy3308         746 IASH  749 (838)
Q Consensus       746 ~A~~  749 (838)
                      ..++
T Consensus       125 ~~~r  128 (1267)
T KOG0783|consen  125 FLSR  128 (1267)
T ss_pred             HHhh
Confidence            6655


No 96 
>PF00023 Ank:  Ankyrin repeat Hereditary spherocytosis;  InterPro: IPR002110  The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it.  The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.69  E-value=3.1e-08  Score=61.03  Aligned_cols=33  Identities=42%  Similarity=0.734  Sum_probs=29.2

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCC
Q psy3308         739 AGFTPLHIASHFGQLNMVRYLVENGANVNATTN  771 (838)
Q Consensus       739 ~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~  771 (838)
                      +|+||||+|+..|+.+++++|+++|++++.+|+
T Consensus         1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~   33 (33)
T PF00023_consen    1 DGNTPLHYAAQRGHPDIVKLLLKHGADINARDN   33 (33)
T ss_dssp             TSBBHHHHHHHTTCHHHHHHHHHTTSCTTCBCT
T ss_pred             CcccHHHHHHHHHHHHHHHHHHHCcCCCCCCCC
Confidence            488999999999999999999999999988764


No 97 
>KOG0782|consensus
Probab=98.68  E-value=5.9e-08  Score=96.56  Aligned_cols=117  Identities=21%  Similarity=0.227  Sum_probs=102.1

Q ss_pred             HHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCC--CCCCCCCCCcHHHHHHHcCCHHH
Q psy3308         678 LHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAE--IDPVTKAGFTPLHIASHFGQLNM  755 (838)
Q Consensus       678 L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~--~~~~~~~g~t~l~~A~~~g~~~~  755 (838)
                      +..|+..+.+--++-+..+|.+.-.++....+.||+|+..|+-++|+|++++|..  +++.|..|.|+||.|+..++..+
T Consensus       870 il~av~~~D~~klqE~h~~gg~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r~v  949 (1004)
T KOG0782|consen  870 ILRAVLSSDLMKLQETHLNGGSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNRAV  949 (1004)
T ss_pred             HHHHHHhccHHHHHHHHhcCCceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchHH
Confidence            4566667766666667778888888888889999999999999999999999864  56788899999999999999999


Q ss_pred             HHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHHHHh
Q psy3308         756 VRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLG  794 (838)
Q Consensus       756 v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~  794 (838)
                      +++|++.|+.+-..|..|.||-.-|-+.|.+++.-||-.
T Consensus       950 c~~lvdagasl~ktd~kg~tp~eraqqa~d~dlaayle~  988 (1004)
T KOG0782|consen  950 CQLLVDAGASLRKTDSKGKTPQERAQQAGDPDLAAYLES  988 (1004)
T ss_pred             HHHHHhcchhheecccCCCChHHHHHhcCCchHHHHHhh
Confidence            999999999999999999999999999999999988754


No 98 
>KOG0818|consensus
Probab=98.60  E-value=1.8e-07  Score=91.79  Aligned_cols=84  Identities=27%  Similarity=0.375  Sum_probs=51.7

Q ss_pred             hHHHHhcCCHHHHHHHHhCCCCCCCCC-CCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHH
Q psy3308         711 LHLCAQEDKVNVATITMFNGAEIDPVT-KAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLII  789 (838)
Q Consensus       711 l~~A~~~g~~~i~~~L~~~~~~~~~~~-~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v  789 (838)
                      ||..++.|+.+..-.|+..|+++|..+ ..|.||||.|++.|+..-+++|+-+|||++..|..|.||+.+|-+.||-++.
T Consensus       137 LhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~~GmtP~~~AR~~gH~~la  216 (669)
T KOG0818|consen  137 LHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQDSSGMTPVDYARQGGHHELA  216 (669)
T ss_pred             HHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCCCCCCCcHHHHHHhcCchHHH
Confidence            555556666665555555666665543 3466666666666666666666666666666666666666666666665555


Q ss_pred             HHHHh
Q psy3308         790 DLLLG  794 (838)
Q Consensus       790 ~~Ll~  794 (838)
                      +.|++
T Consensus       217 eRl~e  221 (669)
T KOG0818|consen  217 ERLVE  221 (669)
T ss_pred             HHHHH
Confidence            55543


No 99 
>KOG0506|consensus
Probab=98.59  E-value=5.6e-08  Score=94.83  Aligned_cols=91  Identities=24%  Similarity=0.334  Sum_probs=83.3

Q ss_pred             CCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhC-CCCCCCCCCCCCcHHHHHHHc
Q psy3308         672 KAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFN-GAEIDPVTKAGFTPLHIASHF  750 (838)
Q Consensus       672 ~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~-~~~~~~~~~~g~t~l~~A~~~  750 (838)
                      .++...+++|+..|.+..++-+.-.|.+++..|.+.+|+||.||-.|+++++++|++. +.+++.+|.+|+|||.-|...
T Consensus       504 ~~~~i~~~~aa~~GD~~alrRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~~F  583 (622)
T KOG0506|consen  504 NDTVINVMYAAKNGDLSALRRFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAKHF  583 (622)
T ss_pred             ccchhhhhhhhhcCCHHHHHHHHHhcccccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhHhc
Confidence            3456788999999999999999889999999999999999999999999999999976 788889999999999999999


Q ss_pred             CCHHHHHHHHHC
Q psy3308         751 GQLNMVRYLVEN  762 (838)
Q Consensus       751 g~~~~v~~Ll~~  762 (838)
                      +|.+++++|-+.
T Consensus       584 ~h~~v~k~L~~~  595 (622)
T KOG0506|consen  584 KHKEVVKLLEEA  595 (622)
T ss_pred             CcHHHHHHHHHH
Confidence            999999999886


No 100
>KOG0818|consensus
Probab=98.41  E-value=1.2e-06  Score=86.22  Aligned_cols=85  Identities=32%  Similarity=0.443  Sum_probs=73.1

Q ss_pred             HHHHHHcCcHHHHHHHHHCCCCCCcccc-CCCcHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcHHHHHHHcCCHHHH
Q psy3308          99 LYMAAQENHDGVVRYLLSKGGNQTLATE-HNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVI  177 (838)
Q Consensus        99 l~~A~~~g~~~~v~~L~~~~~~~~~~~~-~~~~~l~~Aa~~g~~~iv~~L~~~~~~~~~~~~~~~tal~~A~~~g~~~iv  177 (838)
                      ||..++.|+++..--|+..|+++|.... .|.||||.||+.|+.--+++|+-+|+++...|..|.||+.+|=.+||-++.
T Consensus       137 LhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~~GmtP~~~AR~~gH~~la  216 (669)
T KOG0818|consen  137 LHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQDSSGMTPVDYARQGGHHELA  216 (669)
T ss_pred             HHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCCCCCCCcHHHHHHhcCchHHH
Confidence            8888899999988888888888777653 588899999999999889999999999998999999999999999998888


Q ss_pred             HHHHHc
Q psy3308         178 DILIEK  183 (838)
Q Consensus       178 ~~L~~~  183 (838)
                      +-|++.
T Consensus       217 eRl~e~  222 (669)
T KOG0818|consen  217 ERLVEI  222 (669)
T ss_pred             HHHHHH
Confidence            877764


No 101
>KOG3609|consensus
Probab=98.34  E-value=2.6e-06  Score=90.74  Aligned_cols=82  Identities=16%  Similarity=0.258  Sum_probs=56.6

Q ss_pred             ChHHHHHHHcCcHHHHHHHHhCC----CCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhc
Q psy3308         642 YTPLHIAAKKNQMDIATTLLEYN----AKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQE  717 (838)
Q Consensus       642 ~t~L~~A~~~~~~~iv~~Ll~~~----~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~  717 (838)
                      ..-...|++.|+.-.|+..++..    .++|..|.-|+++|+.|+.+.+.+++++|++++..+       ..+|.+|+..
T Consensus        26 e~~fL~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~-------gdALL~aI~~   98 (822)
T KOG3609|consen   26 EKGFLLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE-------GDALLLAIAV   98 (822)
T ss_pred             hHHHHHHHHcCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCcccc-------chHHHHHHHH
Confidence            34455677777777777776632    346667777777777777777777777777765433       4477777777


Q ss_pred             CCHHHHHHHHhCC
Q psy3308         718 DKVNVATITMFNG  730 (838)
Q Consensus       718 g~~~i~~~L~~~~  730 (838)
                      |..++|++++.+.
T Consensus        99 ~~v~~VE~ll~~~  111 (822)
T KOG3609|consen   99 GSVPLVELLLVHF  111 (822)
T ss_pred             HHHHHHHHHHhcc
Confidence            7777777777653


No 102
>KOG0705|consensus
Probab=98.31  E-value=1.7e-06  Score=86.94  Aligned_cols=90  Identities=27%  Similarity=0.366  Sum_probs=73.8

Q ss_pred             HhHHHHhcCCHHHHHHHHhCCCC--CCC--CCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCc
Q psy3308         710 PLHLCAQEDKVNVATITMFNGAE--IDP--VTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGR  785 (838)
Q Consensus       710 ~l~~A~~~g~~~i~~~L~~~~~~--~~~--~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~  785 (838)
                      -|..|+....+..+-+|+.+|..  +|.  .+..|+||||.|+..|++.+.++|+=+|+|+-.+|..|+|||.||-+.|.
T Consensus       627 qLl~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~l~yar~a~s  706 (749)
T KOG0705|consen  627 QLLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMARDAHGRTALFYARQAGS  706 (749)
T ss_pred             HHHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccceecccCCchhhhhHhhccc
Confidence            35566666666677777777643  332  35668899999999999999999998999999999999999999999999


Q ss_pred             HHHHHHHHhCCCCC
Q psy3308         786 VLIIDLLLGAGAQP  799 (838)
Q Consensus       786 ~~~v~~Ll~~ga~~  799 (838)
                      -+|+++|+++|.-.
T Consensus       707 qec~d~llq~gcp~  720 (749)
T KOG0705|consen  707 QECIDVLLQYGCPD  720 (749)
T ss_pred             HHHHHHHHHcCCCc
Confidence            99999999998844


No 103
>KOG2384|consensus
Probab=98.31  E-value=1.7e-06  Score=74.05  Aligned_cols=65  Identities=25%  Similarity=0.311  Sum_probs=51.2

Q ss_pred             CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCC-CCCccCCCCCCcHHHHHHHhCcHHHHHHHHhC
Q psy3308         731 AEIDPVTKAGFTPLHIASHFGQLNMVRYLVENG-ANVNATTNLGYTPLHQASQQGRVLIIDLLLGA  795 (838)
Q Consensus       731 ~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g-~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~  795 (838)
                      .++|.+|..|+||+|.|+..|..+.|.||+++| +.+...|..|.+++.+|-+.|+.++|+.|.++
T Consensus         3 ~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~   68 (223)
T KOG2384|consen    3 GNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFEN   68 (223)
T ss_pred             CCccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHH
Confidence            456777788888888888888888888888887 77777777788888888888888888877776


No 104
>KOG2384|consensus
Probab=98.29  E-value=1.6e-06  Score=74.25  Aligned_cols=70  Identities=29%  Similarity=0.386  Sum_probs=55.8

Q ss_pred             CCCcccCCCCCCcHHHHHHHcCcHHHHHHHHHCC-CCCCccccCCCcHHHHHHHcCCHHHHHHHHHcCCCC
Q psy3308          85 GATINVQSLNGFTPLYMAAQENHDGVVRYLLSKG-GNQTLATEHNITPLHVACKWGKVAMVELLISKGANI  154 (838)
Q Consensus        85 ~~~~~~~~~~~~t~l~~A~~~g~~~~v~~L~~~~-~~~~~~~~~~~~~l~~Aa~~g~~~iv~~L~~~~~~~  154 (838)
                      +.++|.+|..|||+++.|+..|+.+.|.||+.+| +.+...|..|.+++.+|-+.|+.++|..|.++..+.
T Consensus         2 e~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~et   72 (223)
T KOG2384|consen    2 EGNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFENDRET   72 (223)
T ss_pred             CCCccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHhccC
Confidence            3467888888888888888888888888888888 667777888888888888888888888888765443


No 105
>KOG0511|consensus
Probab=98.28  E-value=2.7e-06  Score=80.93  Aligned_cols=67  Identities=24%  Similarity=0.243  Sum_probs=41.5

Q ss_pred             HHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcH
Q psy3308         677 PLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTP  743 (838)
Q Consensus       677 ~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~  743 (838)
                      -|..|++.|..+.|++|++.|.++|..|.....||.+|+-.||.+++++|+++|+-+..-...|...
T Consensus        39 elceacR~GD~d~v~~LVetgvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~rdtf~G~RC  105 (516)
T KOG0511|consen   39 ELCEACRAGDVDRVRYLVETGVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAICSRDTFDGDRC  105 (516)
T ss_pred             HHHHHhhcccHHHHHHHHHhCCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCcccccccCcchh
Confidence            4556666666666666666666666666666666666666666666666666666554444444443


No 106
>KOG0522|consensus
Probab=98.27  E-value=2.3e-06  Score=85.68  Aligned_cols=64  Identities=38%  Similarity=0.600  Sum_probs=37.2

Q ss_pred             CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHHHHh
Q psy3308         731 AEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLG  794 (838)
Q Consensus       731 ~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~  794 (838)
                      ..++..|..|+||||.|+..||.+.++.|+.+|+++..+++.|++|||.|+..|+..++.-++.
T Consensus        46 ~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~~g~~q~i~~vlr  109 (560)
T KOG0522|consen   46 LVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWSPLHEAVSTGNEQIITEVLR  109 (560)
T ss_pred             ceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccccccccccHHHHHHHcCCHHHHHHHHH
Confidence            3445555555666666666666666666666666666666666666666666665555544443


No 107
>KOG3609|consensus
Probab=98.21  E-value=5.1e-06  Score=88.65  Aligned_cols=121  Identities=20%  Similarity=0.263  Sum_probs=100.4

Q ss_pred             CCcHHHHHHHcCcHHHHHHHHhCC----CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHH
Q psy3308         575 GFTPLHLAAKYGRMKIAQMLLQKD----APVDSQGKNGVTPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAK  650 (838)
Q Consensus       575 ~~~~l~~a~~~~~~~~v~~Ll~~~----~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~  650 (838)
                      +..-+..|++.|+...|+..++..    .++|-+|.-|.++|++|+.+.+.+++++|++++...       ..+|-.|+.
T Consensus        25 ~e~~fL~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~-------gdALL~aI~   97 (822)
T KOG3609|consen   25 GEKGFLLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE-------GDALLLAIA   97 (822)
T ss_pred             hhHHHHHHHHcCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCcccc-------chHHHHHHH
Confidence            345677899999999999888752    567888999999999999999999999999986554       479999999


Q ss_pred             cCcHHHHHHHHhCCCCC----------CCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCC
Q psy3308         651 KNQMDIATTLLEYNAKP----------NAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSH  702 (838)
Q Consensus       651 ~~~~~iv~~Ll~~~~~~----------~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~  702 (838)
                      .|...+|+.++.+....          .....-+.|||..|+..+++||++.|+.+|+.+..
T Consensus        98 ~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~~i~~  159 (822)
T KOG3609|consen   98 VGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQCLLTRGHCIPI  159 (822)
T ss_pred             HHHHHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcchHHHHHHHHcCCCCCC
Confidence            99999999999864332          12233457999999999999999999999987643


No 108
>KOG0705|consensus
Probab=98.17  E-value=5.9e-06  Score=83.19  Aligned_cols=89  Identities=27%  Similarity=0.367  Sum_probs=48.8

Q ss_pred             HHHHHHHcCCHHHHHHHHHcCCC--Ccc--ccCCCCcHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCccHHHHHHhCCc
Q psy3308         131 PLHVACKWGKVAMVELLISKGAN--IEA--KTRDGLTPLHCAARSGHDNVIDILIEKGAALYSKTKNGLAPLHMASQGDH  206 (838)
Q Consensus       131 ~l~~Aa~~g~~~iv~~L~~~~~~--~~~--~~~~~~tal~~A~~~g~~~iv~~L~~~~~~~~~~~~~~~~~l~~A~~~g~  206 (838)
                      -|..|+...++..+-+|+-+|..  ++.  .+.+|+||||+||+.|+..+.++|+=+|+++-..|..|+|+|.||-+.|.
T Consensus       627 qLl~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~l~yar~a~s  706 (749)
T KOG0705|consen  627 QLLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMARDAHGRTALFYARQAGS  706 (749)
T ss_pred             HHHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccceecccCCchhhhhHhhccc
Confidence            34455555555555555555532  111  23344556666666666666666555555555555556666666666666


Q ss_pred             HHHHHHHHhCCCC
Q psy3308         207 EAATRVLIYHGAG  219 (838)
Q Consensus       207 ~~~v~~L~~~~~~  219 (838)
                      -+++..|+++|..
T Consensus       707 qec~d~llq~gcp  719 (749)
T KOG0705|consen  707 QECIDVLLQYGCP  719 (749)
T ss_pred             HHHHHHHHHcCCC
Confidence            6666666665543


No 109
>KOG0511|consensus
Probab=98.17  E-value=4.7e-06  Score=79.35  Aligned_cols=67  Identities=30%  Similarity=0.356  Sum_probs=52.4

Q ss_pred             HHHHHHcCcHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcHH
Q psy3308          99 LYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPL  165 (838)
Q Consensus        99 l~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~~l~~Aa~~g~~~iv~~L~~~~~~~~~~~~~~~tal  165 (838)
                      |..||+.|.+|.|++|++.|.++|..|..-.+||.+|+-.||.++|++|+++|+-.....-+|..++
T Consensus        40 lceacR~GD~d~v~~LVetgvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~rdtf~G~RC~  106 (516)
T KOG0511|consen   40 LCEACRAGDVDRVRYLVETGVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAICSRDTFDGDRCH  106 (516)
T ss_pred             HHHHhhcccHHHHHHHHHhCCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCcccccccCcchhh
Confidence            7788888888888888888888888888888888888888888888888888875544444555443


No 110
>KOG0521|consensus
Probab=98.00  E-value=4.5e-06  Score=92.24  Aligned_cols=113  Identities=24%  Similarity=0.298  Sum_probs=92.0

Q ss_pred             CCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCC
Q psy3308         673 AGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQ  752 (838)
Q Consensus       673 ~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~  752 (838)
                      .+.+++..|...-+..++.|..        .-..|.++||.|+..|..-++++|+.+|+++|..|..|+||+|.+...|+
T Consensus       630 ~~~~~~~~~~~~~~~~~~n~~~--------~~~~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~  701 (785)
T KOG0521|consen  630 DGECLPRIATALAHGCCENWPV--------VLCIGCSLLHVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHATASGH  701 (785)
T ss_pred             Cccchhhhhhhhcchhhhccch--------hhhcccchhhhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhhhhcc
Confidence            3445555555555444444432        23467899999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHHHH
Q psy3308         753 LNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLL  793 (838)
Q Consensus       753 ~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll  793 (838)
                      ...+..|+++|++++..+.+|.+||.+|....+-+++-+|.
T Consensus       702 ~~~~~~ll~~~a~~~a~~~~~~~~l~~a~~~~~~d~~~l~~  742 (785)
T KOG0521|consen  702 TSIACLLLKRGADPNAFDPDGKLPLDIAMEAANADIVLLLR  742 (785)
T ss_pred             cchhhhhccccccccccCccCcchhhHHhhhccccHHHHHh
Confidence            99999999999999999999999999998777766665554


No 111
>KOG0522|consensus
Probab=97.89  E-value=3.3e-05  Score=77.65  Aligned_cols=86  Identities=28%  Similarity=0.407  Sum_probs=64.0

Q ss_pred             hHHHHHHHcCcHHHHHHHHh--CCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHhHHHHhcCCH
Q psy3308         643 TPLHIAAKKNQMDIATTLLE--YNAKPNAESKAGFTPLHLSAQEGHTDMSSLLIEHGATVSHQAKNGLTPLHLCAQEDKV  720 (838)
Q Consensus       643 t~L~~A~~~~~~~iv~~Ll~--~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~  720 (838)
                      .|+|.++.....+-+..++.  ....++.+|..|.||||.|+.-|+.+.++.|+.+|+++..+++.|+++||.|+..|+.
T Consensus        22 ~~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~~g~~  101 (560)
T KOG0522|consen   22 KPLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWSPLHEAVSTGNE  101 (560)
T ss_pred             cccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccccccccccHHHHHHHcCCH
Confidence            35788877776665555333  3445677777888888888888888888888888888888888888888888888887


Q ss_pred             HHHHHHHh
Q psy3308         721 NVATITMF  728 (838)
Q Consensus       721 ~i~~~L~~  728 (838)
                      .++..++.
T Consensus       102 q~i~~vlr  109 (560)
T KOG0522|consen  102 QIITEVLR  109 (560)
T ss_pred             HHHHHHHH
Confidence            76665553


No 112
>KOG0521|consensus
Probab=97.84  E-value=8.6e-06  Score=90.04  Aligned_cols=87  Identities=39%  Similarity=0.446  Sum_probs=79.0

Q ss_pred             CCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCCCCCCccch-HHHHHH
Q psy3308         736 VTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTNLFCC-ATILVK  814 (838)
Q Consensus       736 ~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~-~~~~~~  814 (838)
                      +-..|.|+||.|+..|..-++++|+++|+++|..|..|+||+|.+...|+...+..|+++|++++..+.+|.+ +.++.+
T Consensus       652 ~~~~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a~~~~~~~~l~~a~~  731 (785)
T KOG0521|consen  652 VLCIGCSLLHVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHATASGHTSIACLLLKRGADPNAFDPDGKLPLDIAME  731 (785)
T ss_pred             hhhcccchhhhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhhhhcccchhhhhccccccccccCccCcchhhHHhh
Confidence            3456899999999999999999999999999999999999999999999999999999999999999999999 999877


Q ss_pred             cCCccCccc
Q psy3308         815 NGAEIDPVT  823 (838)
Q Consensus       815 ~~~~~~~~~  823 (838)
                      . ...|.+.
T Consensus       732 ~-~~~d~~~  739 (785)
T KOG0521|consen  732 A-ANADIVL  739 (785)
T ss_pred             h-ccccHHH
Confidence            6 4445443


No 113
>KOG0520|consensus
Probab=97.81  E-value=2.7e-05  Score=85.38  Aligned_cols=126  Identities=26%  Similarity=0.254  Sum_probs=76.4

Q ss_pred             CCCCCCcHHHHHHHcCcHHHHHHHHhC-CCCCCCCCCCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHH
Q psy3308         670 ESKAGFTPLHLSAQEGHTDMSSLLIEH-GATVSHQAKNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIAS  748 (838)
Q Consensus       670 ~~~~g~t~L~~A~~~g~~~iv~~Ll~~-g~~~~~~~~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~  748 (838)
                      ....|++.+|.++..++..+++.+++- |......+..|...+|+++..|..-.+....-+|..++.+|..|+||||+|+
T Consensus       570 ~~~r~~lllhL~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hfca~lg~ewA~ll~~~~~~ai~i~D~~G~tpL~wAa  649 (975)
T KOG0520|consen  570 VNFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHFCAALGYEWAFLPISADGVAIDIRDRNGWTPLHWAA  649 (975)
T ss_pred             CCCcchHHHHHHHHHhHHHHHHHHhcccccCchhhcccCCChhhHhhhcCCceeEEEEeecccccccccCCCCcccchHh
Confidence            344556777777777776666666663 4444445556666666655444333333333346666677777777777777


Q ss_pred             HcCCHHHHHHHHHCCCCCc------cCCCCCCcHHHHHHHhCcHHHHHHHHhC
Q psy3308         749 HFGQLNMVRYLVENGANVN------ATTNLGYTPLHQASQQGRVLIIDLLLGA  795 (838)
Q Consensus       749 ~~g~~~~v~~Ll~~g~~~~------~~~~~g~t~l~~A~~~~~~~~v~~Ll~~  795 (838)
                      .+|+..++.-|++-|++.+      ..+..|.|+-..|..+|+..+.-+|-++
T Consensus       650 ~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~lse~  702 (975)
T KOG0520|consen  650 FRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLSEK  702 (975)
T ss_pred             hcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHHhhh
Confidence            7777777777776654432      2333467777777777776666666554


No 114
>KOG0520|consensus
Probab=97.78  E-value=2e-05  Score=86.28  Aligned_cols=123  Identities=22%  Similarity=0.208  Sum_probs=99.1

Q ss_pred             CCCCCCCCcHhHHHHhcCCHHHHHHHHhC-CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHH-CCCCCccCCCCCCcHHH
Q psy3308         701 SHQAKNGLTPLHLCAQEDKVNVATITMFN-GAEIDPVTKAGFTPLHIASHFGQLNMVRYLVE-NGANVNATTNLGYTPLH  778 (838)
Q Consensus       701 ~~~~~~~~t~l~~A~~~g~~~i~~~L~~~-~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~-~g~~~~~~~~~g~t~l~  778 (838)
                      ......|++.+|+++..++..+++.+++. +......|..|...+|+++ .++.+++.+|+. +|..++.+|..|+||||
T Consensus       568 ~~~~~r~~lllhL~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hfca-~lg~ewA~ll~~~~~~ai~i~D~~G~tpL~  646 (975)
T KOG0520|consen  568 SSVNFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHFCA-ALGYEWAFLPISADGVAIDIRDRNGWTPLH  646 (975)
T ss_pred             ccCCCcchHHHHHHHHHhHHHHHHHHhcccccCchhhcccCCChhhHhh-hcCCceeEEEEeecccccccccCCCCcccc
Confidence            44556789999999999999999999886 6666677778888888844 456677766665 48899999999999999


Q ss_pred             HHHHhCcHHHHHHHHhCCCCCCCC------CCccch-HHHHHHcCCccCccccc
Q psy3308         779 QASQQGRVLIIDLLLGAGAQPNAT------TNLFCC-ATILVKNGAEIDPVTKL  825 (838)
Q Consensus       779 ~A~~~~~~~~v~~Ll~~ga~~~~~------~~~~~~-~~~~~~~~~~~~~~~~~  825 (838)
                      +|+..|+..++.-|.+-|+++...      +-.|.| .+++..+|++ .+--.|
T Consensus       647 wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~-gia~~l  699 (975)
T KOG0520|consen  647 WAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHK-GIAGYL  699 (975)
T ss_pred             hHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhccccc-chHHHH
Confidence            999999999999999888877553      346888 9999988885 444443


No 115
>PF03158 DUF249:  Multigene family 530 protein;  InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=97.20  E-value=0.0025  Score=55.31  Aligned_cols=139  Identities=15%  Similarity=0.107  Sum_probs=98.1

Q ss_pred             CcHHHHHHHcCcHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcHHHHHHHcCCHH
Q psy3308          96 FTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDN  175 (838)
Q Consensus        96 ~t~l~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~~l~~Aa~~g~~~iv~~L~~~~~~~~~~~~~~~tal~~A~~~g~~~  175 (838)
                      +-.|..|++.+-+.|+++.-+...+.   -....+.+..||+..+.|||+|.-++   .  .-.+-.+-+..|....+++
T Consensus        47 ~CLl~HAVk~nmL~ILqkyke~L~~~---~~~~q~LFElAC~~qkydiV~WI~qn---L--~i~~~~~iFdIA~~~kDls  118 (192)
T PF03158_consen   47 WCLLYHAVKYNMLSILQKYKEDLENE---RYLNQELFELACEEQKYDIVKWIGQN---L--HIYNPEDIFDIAFAKKDLS  118 (192)
T ss_pred             HHHHHHHHHcCcHHHHHHHHHHhhcc---hhHHHHHHHHHHHHccccHHHHHhhc---c--CCCCchhhhhhhhhccchh
Confidence            34577899999999999987763321   13456789999999999999999543   1  2233455688999999888


Q ss_pred             HHH----HHHHcCCCccCC--CCCCccHHHHHHhCCcHHHHHHHHhCCCCCCcccCCCccHHHHHHhcCCHHHHHHHHH
Q psy3308         176 VID----ILIEKGAALYSK--TKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLD  248 (838)
Q Consensus       176 iv~----~L~~~~~~~~~~--~~~~~~~l~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~iv~~L~~  248 (838)
                      +..    ++.++..+....  +.--..-|.+|+..|-+.-+.-.+++|-+++.      ++|..|+.+.|..|+.+++.
T Consensus       119 LyslGY~l~~~~~~~~~~~d~~~ll~~hl~~a~~kgll~F~letlkygg~~~~------~vls~Av~ynhRkIL~yfi~  191 (192)
T PF03158_consen  119 LYSLGYKLLFNRMMSEHNEDPTSLLTQHLEKAAAKGLLPFVLETLKYGGNVDI------IVLSQAVKYNHRKILDYFIR  191 (192)
T ss_pred             HHHHHHHHHHhhcccccccCHHHHHHHHHHHHHHCCCHHHHHHHHHcCCcccH------HHHHHHHHhhHHHHHHHhhc
Confidence            532    233332211001  11123457889999999999888898866553      69999999999999998864


No 116
>PF03158 DUF249:  Multigene family 530 protein;  InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=97.13  E-value=0.0043  Score=53.95  Aligned_cols=137  Identities=13%  Similarity=0.111  Sum_probs=70.8

Q ss_pred             cHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCcHHH
Q psy3308         610 TPLHVASHYDHQNVALLLLDRGASPHAVAKNGYTPLHIAAKKNQMDIATTLLEYNAKPNAESKAGFTPLHLSAQEGHTDM  689 (838)
Q Consensus       610 ~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~i  689 (838)
                      -.+..|+..+...|+++.-+...+.   -...++.+..|++..+.|+|+|+-+     +..-....+.+..|....+.++
T Consensus        48 CLl~HAVk~nmL~ILqkyke~L~~~---~~~~q~LFElAC~~qkydiV~WI~q-----nL~i~~~~~iFdIA~~~kDlsL  119 (192)
T PF03158_consen   48 CLLYHAVKYNMLSILQKYKEDLENE---RYLNQELFELACEEQKYDIVKWIGQ-----NLHIYNPEDIFDIAFAKKDLSL  119 (192)
T ss_pred             HHHHHHHHcCcHHHHHHHHHHhhcc---hhHHHHHHHHHHHHccccHHHHHhh-----ccCCCCchhhhhhhhhccchhH
Confidence            3566677777777777665542211   1234567777888888888888854     2222233456677777777665


Q ss_pred             HH----HHHhCCCCCCCCC--CCCCcHhHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHH
Q psy3308         690 SS----LLIEHGATVSHQA--KNGLTPLHLCAQEDKVNVATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLV  760 (838)
Q Consensus       690 v~----~Ll~~g~~~~~~~--~~~~t~l~~A~~~g~~~i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll  760 (838)
                      ..    ++.++.......+  .--..-|..|+.+|-+..+.-.+++|-.++.      ++|..|+..+|..|+.+++
T Consensus       120 yslGY~l~~~~~~~~~~~d~~~ll~~hl~~a~~kgll~F~letlkygg~~~~------~vls~Av~ynhRkIL~yfi  190 (192)
T PF03158_consen  120 YSLGYKLLFNRMMSEHNEDPTSLLTQHLEKAAAKGLLPFVLETLKYGGNVDI------IVLSQAVKYNHRKILDYFI  190 (192)
T ss_pred             HHHHHHHHHhhcccccccCHHHHHHHHHHHHHHCCCHHHHHHHHHcCCcccH------HHHHHHHHhhHHHHHHHhh
Confidence            32    1222211100000  0001234555555555555555555444321      4555555555555555554


No 117
>KOG2505|consensus
Probab=96.87  E-value=0.0012  Score=65.99  Aligned_cols=61  Identities=21%  Similarity=0.187  Sum_probs=42.6

Q ss_pred             HHHHHHHhCCCCCCC------CCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHH
Q psy3308         721 NVATITMFNGAEIDP------VTKAGFTPLHIASHFGQLNMVRYLVENGANVNATTNLGYTPLHQAS  781 (838)
Q Consensus       721 ~i~~~L~~~~~~~~~------~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~  781 (838)
                      +.+++|.+++...|.      .+...-|+||+|+..|..+||.+||+.|+|+..+|..|+||.+++.
T Consensus       405 ~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~  471 (591)
T KOG2505|consen  405 DSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLSA  471 (591)
T ss_pred             hHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchhcccCCCCcccccc
Confidence            455566655554432      3444557888888888888888888888888888888888877776


No 118
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=96.79  E-value=0.0024  Score=37.63  Aligned_cols=28  Identities=46%  Similarity=0.769  Sum_probs=17.4

Q ss_pred             CCcHHHHHHHhCcHHHHHHHHhCCCCCC
Q psy3308         773 GYTPLHQASQQGRVLIIDLLLGAGAQPN  800 (838)
Q Consensus       773 g~t~l~~A~~~~~~~~v~~Ll~~ga~~~  800 (838)
                      |.||+++|+..++.+++++|+++|.+++
T Consensus         2 ~~~~l~~~~~~~~~~~~~~ll~~~~~~~   29 (30)
T smart00248        2 GRTPLHLAAENGNLEVVKLLLDKGADIN   29 (30)
T ss_pred             CCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence            4566666666666666666666665543


No 119
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=96.46  E-value=0.0054  Score=36.00  Aligned_cols=28  Identities=46%  Similarity=0.885  Sum_probs=21.6

Q ss_pred             CCcHHHHHHHcCCHHHHHHHHHCCCCCc
Q psy3308         740 GFTPLHIASHFGQLNMVRYLVENGANVN  767 (838)
Q Consensus       740 g~t~l~~A~~~g~~~~v~~Ll~~g~~~~  767 (838)
                      |.||+++|+..++.+++++|+++|.+++
T Consensus         2 ~~~~l~~~~~~~~~~~~~~ll~~~~~~~   29 (30)
T smart00248        2 GRTPLHLAAENGNLEVVKLLLDKGADIN   29 (30)
T ss_pred             CCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence            5678888888888888888888776653


No 120
>PF06128 Shigella_OspC:  Shigella flexneri OspC protein;  InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=96.40  E-value=0.03  Score=50.30  Aligned_cols=46  Identities=30%  Similarity=0.461  Sum_probs=32.4

Q ss_pred             CHHHHHHHHHCC-CCCcc---CCCCCCcHHHHHHHhCcHHHHHHHHhCCC
Q psy3308         752 QLNMVRYLVENG-ANVNA---TTNLGYTPLHQASQQGRVLIIDLLLGAGA  797 (838)
Q Consensus       752 ~~~~v~~Ll~~g-~~~~~---~~~~g~t~l~~A~~~~~~~~v~~Ll~~ga  797 (838)
                      +..++++++++| +++|.   +-+.|.|.|.-|..+++.+++.+|+++||
T Consensus       229 ~~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~GA  278 (284)
T PF06128_consen  229 SYKVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLKYGA  278 (284)
T ss_pred             cHHHHHHHHhccccccchhhhccCCcchHHHhHHhcCcHHHHHHHHHcCc
Confidence            356677777776 35554   34557788888888888888888888877


No 121
>KOG2505|consensus
Probab=96.39  E-value=0.0038  Score=62.66  Aligned_cols=62  Identities=23%  Similarity=0.191  Sum_probs=53.5

Q ss_pred             HHHHHHHHHCCCCCcc------CCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCCCCCCccch-HHHHHH
Q psy3308         753 LNMVRYLVENGANVNA------TTNLGYTPLHQASQQGRVLIIDLLLGAGAQPNATTNLFCC-ATILVK  814 (838)
Q Consensus       753 ~~~v~~Ll~~g~~~~~------~~~~g~t~l~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~-~~~~~~  814 (838)
                      ...+++|.+++++.|.      .+....|+||+|+..|.-.+|.+||+.|+||.+.|..|.| .+++..
T Consensus       404 p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~n  472 (591)
T KOG2505|consen  404 PDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLSAN  472 (591)
T ss_pred             hhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchhcccCCCCccccccc
Confidence            5778999999877654      3334679999999999999999999999999999999999 888763


No 122
>PF06128 Shigella_OspC:  Shigella flexneri OspC protein;  InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=95.88  E-value=0.031  Score=50.18  Aligned_cols=46  Identities=24%  Similarity=0.359  Sum_probs=35.1

Q ss_pred             cHHHHHHHHHCCC-CCC---ccccCCCcHHHHHHHcCCHHHHHHHHHcCC
Q psy3308         107 HDGVVRYLLSKGG-NQT---LATEHNITPLHVACKWGKVAMVELLISKGA  152 (838)
Q Consensus       107 ~~~~v~~L~~~~~-~~~---~~~~~~~~~l~~Aa~~g~~~iv~~L~~~~~  152 (838)
                      +..++++++++|- ++|   .....|.|-|.-|.+.++.+++.+|+++|+
T Consensus       229 ~~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~GA  278 (284)
T PF06128_consen  229 SYKVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLKYGA  278 (284)
T ss_pred             cHHHHHHHHhccccccchhhhccCCcchHHHhHHhcCcHHHHHHHHHcCc
Confidence            5567888888773 333   245678888999999999999999998887


No 123
>PLN03081 pentatricopeptide (PPR) repeat-containing protein; Provisional
Probab=94.13  E-value=14  Score=42.70  Aligned_cols=18  Identities=22%  Similarity=0.109  Sum_probs=10.1

Q ss_pred             HhHHHhcCCHHHHHHHHh
Q psy3308          26 LHIAAKKDDCKAAALLLE   43 (838)
Q Consensus        26 l~~Aa~~g~~~~v~~L~~   43 (838)
                      +..-++.|.++-..-+++
T Consensus       165 i~~y~k~g~~~~A~~lf~  182 (697)
T PLN03081        165 LLMHVKCGMLIDARRLFD  182 (697)
T ss_pred             HHHHhcCCCHHHHHHHHh
Confidence            444455666666555554


No 124
>PLN03218 maturation of RBCL 1; Provisional
Probab=93.46  E-value=3.1  Score=49.65  Aligned_cols=361  Identities=13%  Similarity=0.090  Sum_probs=185.9

Q ss_pred             CCchHHHHHHHhhcCC-CCCCCCcHHh------HHHhcCCHHHHHHHHhccccccchhhcccCcchhhhccchhhhhcCc
Q psy3308           2 QQGHDRVVAVLLENDT-KGKVKLPALH------IAAKKDDCKAAALLLEVSFSNTKLEVSLSNTKLEVSLSNTKFEATGQ   74 (838)
Q Consensus         2 ~~g~~~iv~~l~~~~~-~~~~~~~al~------~Aa~~g~~~~v~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~   74 (838)
                      +.|+++-..-+++... .+...++.+.      ..++.|.++-..-+++.-..         .+...+.......+..|.
T Consensus       382 r~G~l~eAl~Lfd~M~~~gvv~~~~v~~~~li~~~~~~g~~~eAl~lf~~M~~---------pd~~Tyn~LL~a~~k~g~  452 (1060)
T PLN03218        382 RDGRIKDCIDLLEDMEKRGLLDMDKIYHAKFFKACKKQRAVKEAFRFAKLIRN---------PTLSTFNMLMSVCASSQD  452 (1060)
T ss_pred             HCcCHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHCCCHHHHHHHHHHcCC---------CCHHHHHHHHHHHHhCcC
Confidence            3466555555555432 2332333332      24566777665555541100         111222222333466677


Q ss_pred             HHHHH----HHHHCCCCcccCCCCCCcHHHHHHHcCcHHHHHHHH----HCCCCCCccccCCCcHHHHHHHcCCHH----
Q psy3308          75 EEVAK----ILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLL----SKGGNQTLATEHNITPLHVACKWGKVA----  142 (838)
Q Consensus        75 ~~~v~----~l~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~L~----~~~~~~~~~~~~~~~~l~~Aa~~g~~~----  142 (838)
                      .+.+.    .+.+.|..++..  ...+.+...++.|.++.+.-++    +.|..++...  ..+.+...++.|+++    
T Consensus       453 ~e~A~~lf~~M~~~Gl~pD~~--tynsLI~~y~k~G~vd~A~~vf~eM~~~Gv~PdvvT--ynaLI~gy~k~G~~eeAl~  528 (1060)
T PLN03218        453 IDGALRVLRLVQEAGLKADCK--LYTTLISTCAKSGKVDAMFEVFHEMVNAGVEANVHT--FGALIDGCARAGQVAKAFG  528 (1060)
T ss_pred             HHHHHHHHHHHHHcCCCCCHH--HHHHHHHHHHhCcCHHHHHHHHHHHHHcCCCCCHHH--HHHHHHHHHHCcCHHHHHH
Confidence            65554    444556655432  2346677778899987555544    4555555322  234455567888865    


Q ss_pred             HHHHHHHcCCCCccccCCCCcHHHHHHHcCCHHHHHHHHH----cCCCccCCCCCC-ccHHHHHHhCCcHHHHHHH----
Q psy3308         143 MVELLISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIE----KGAALYSKTKNG-LAPLHMASQGDHEAATRVL----  213 (838)
Q Consensus       143 iv~~L~~~~~~~~~~~~~~~tal~~A~~~g~~~iv~~L~~----~~~~~~~~~~~~-~~~l~~A~~~g~~~~v~~L----  213 (838)
                      +.+.+.+.|..++...  ..+.+...++.|..+-+..+++    .+..+. .+... .+.+...++.|.++-+.-+    
T Consensus       529 lf~~M~~~Gv~PD~vT--YnsLI~a~~k~G~~deA~~lf~eM~~~~~gi~-PD~vTynaLI~ay~k~G~ldeA~elf~~M  605 (1060)
T PLN03218        529 AYGIMRSKNVKPDRVV--FNALISACGQSGAVDRAFDVLAEMKAETHPID-PDHITVGALMKACANAGQVDRAKEVYQMI  605 (1060)
T ss_pred             HHHHHHHcCCCCCHHH--HHHHHHHHHHCCCHHHHHHHHHHHHHhcCCCC-CcHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence            4455556676654322  2345667778888875544442    111111 12222 3345556778887644444    


Q ss_pred             HhCCCCCCcccCCCccHHHHHHhcCCHHHHHHH----HHCCCCccccccCCCch-HHHHHhhCCccccccChHHHHHHHH
Q psy3308         214 IYHGAGVDEITVDYLTALHVASHCGHVRVAKTL----LDRKADPNARALNGFTP-LHIACKKNRYKSSHCNHVWVAKTLL  288 (838)
Q Consensus       214 ~~~~~~~~~~~~~~~~~l~~A~~~g~~~iv~~L----~~~~~~~~~~~~~~~~~-l~~a~~~~~~~~~~~~~~~i~~~Ll  288 (838)
                      .+.|...+..  ...+.+..-+..|+++-+..+    .+.|..|+..   .++. +...+..|..+    .-.++++.+.
T Consensus       606 ~e~gi~p~~~--tynsLI~ay~k~G~~deAl~lf~eM~~~Gv~PD~~---TynsLI~a~~k~G~~e----eA~~l~~eM~  676 (1060)
T PLN03218        606 HEYNIKGTPE--VYTIAVNSCSQKGDWDFALSIYDDMKKKGVKPDEV---FFSALVDVAGHAGDLD----KAFEILQDAR  676 (1060)
T ss_pred             HHcCCCCChH--HHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCCHH---HHHHHHHHHHhCCCHH----HHHHHHHHHH
Confidence            4455443322  223455555678886655444    4556666533   2333 34444555433    2456777888


Q ss_pred             hCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHH----hCCCCccccCCCCCcHH-HHHHHcCCHHHHHH----HHHcCCC
Q psy3308         289 DRKADPNARALNGFTPLHIACKKNRYKVVELLL----KYGASIAATTESGLTPL-HVASFMGCMNIAIF----LLQAGAA  359 (838)
Q Consensus       289 ~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~L~----~~~~~~~~~~~~~~~~l-~~A~~~g~~~iv~~----Ll~~~~~  359 (838)
                      +.|..++...  ..+.+...++.|.++....++    +.|..++.   ..++.| ..-++.|..+-..-    +.+.|..
T Consensus       677 k~G~~pd~~t--ynsLI~ay~k~G~~eeA~~lf~eM~~~g~~Pdv---vtyN~LI~gy~k~G~~eeAlelf~eM~~~Gi~  751 (1060)
T PLN03218        677 KQGIKLGTVS--YSSLMGACSNAKNWKKALELYEDIKSIKLRPTV---STMNALITALCEGNQLPKALEVLSEMKRLGLC  751 (1060)
T ss_pred             HcCCCCCHHH--HHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCCH---HHHHHHHHHHHHCCCHHHHHHHHHHHHHcCCC
Confidence            8888776542  234556667778876554444    34544432   223444 44457777664443    3445666


Q ss_pred             CCCCCCCCCcHHHHHHHcCcHHHHHHHH----HCCCCcc
Q psy3308         360 PDTATVRGETPLHLAARANQTDIVRILL----RNGASVD  394 (838)
Q Consensus       360 ~~~~~~~~~~~l~~A~~~g~~~iv~~Ll----~~g~~~~  394 (838)
                      ++....  .+.+...+..|..+....++    +.|..++
T Consensus       752 Pd~~Ty--~sLL~a~~k~G~le~A~~l~~~M~k~Gi~pd  788 (1060)
T PLN03218        752 PNTITY--SILLVASERKDDADVGLDLLSQAKEDGIKPN  788 (1060)
T ss_pred             CCHHHH--HHHHHHHHHCCCHHHHHHHHHHHHHcCCCCC
Confidence            654332  12344445567766555544    4455444


No 125
>PF11929 DUF3447:  Domain of unknown function (DUF3447);  InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it.  The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=92.83  E-value=0.17  Score=38.29  Aligned_cols=18  Identities=28%  Similarity=0.436  Sum_probs=8.3

Q ss_pred             HHHHHHcCCHHHHHHHHH
Q psy3308         165 LHCAARSGHDNVIDILIE  182 (838)
Q Consensus       165 l~~A~~~g~~~iv~~L~~  182 (838)
                      +..|+..|+.||++.+++
T Consensus        10 l~~Ai~GGN~eII~~c~~   27 (76)
T PF11929_consen   10 LEYAIIGGNFEIINICLK   27 (76)
T ss_pred             HHHHHhCCCHHHHHHHHH
Confidence            444444444444444443


No 126
>PF11929 DUF3447:  Domain of unknown function (DUF3447);  InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it.  The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=92.56  E-value=0.22  Score=37.68  Aligned_cols=48  Identities=17%  Similarity=0.147  Sum_probs=40.7

Q ss_pred             ccHHHHHHhCCcHHHHHHHHhCCCCCCcccCCCccHHHHHHhcCCHHHHHHHHHC
Q psy3308         195 LAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLDR  249 (838)
Q Consensus       195 ~~~l~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~iv~~L~~~  249 (838)
                      ...+..|+.+|+.|+++.+++.+ .++      ...+..|+..-+.++++||+++
T Consensus         7 ~~tl~~Ai~GGN~eII~~c~~~~-~~~------~~~l~~AI~~H~n~i~~~l~~~   54 (76)
T PF11929_consen    7 KKTLEYAIIGGNFEIINICLKKN-KPD------NDCLEYAIKSHNNEIADWLIEN   54 (76)
T ss_pred             HHHHHHHHhCCCHHHHHHHHHHh-ccH------HHHHHHHHHHhhHHHHHHHHHh
Confidence            45789999999999999999764 111      3689999999999999999986


No 127
>PLN03081 pentatricopeptide (PPR) repeat-containing protein; Provisional
Probab=92.21  E-value=27  Score=40.44  Aligned_cols=276  Identities=11%  Similarity=0.090  Sum_probs=133.7

Q ss_pred             cHHHHHHHcCcHHHHHHHH----HCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcH-HHHHHHc
Q psy3308          97 TPLYMAAQENHDGVVRYLL----SKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTP-LHCAARS  171 (838)
Q Consensus        97 t~l~~A~~~g~~~~v~~L~----~~~~~~~~~~~~~~~~l~~Aa~~g~~~iv~~L~~~~~~~~~~~~~~~ta-l~~A~~~  171 (838)
                      +.+...++.++.+.++.++    ..|..++..  .....+..-++.|.++-..-+.+.-...   +....+. +...++.
T Consensus       128 ~ll~a~~~~~~~~~a~~l~~~m~~~g~~~~~~--~~n~Li~~y~k~g~~~~A~~lf~~m~~~---~~~t~n~li~~~~~~  202 (697)
T PLN03081        128 ALVEACIALKSIRCVKAVYWHVESSGFEPDQY--MMNRVLLMHVKCGMLIDARRLFDEMPER---NLASWGTIIGGLVDA  202 (697)
T ss_pred             HHHHHHHhCCCHHHHHHHHHHHHHhCCCcchH--HHHHHHHHHhcCCCHHHHHHHHhcCCCC---CeeeHHHHHHHHHHC
Confidence            3344444556665444433    345444321  1234455556777777777776654332   2223333 3345666


Q ss_pred             CCHH----HHHHHHHcCCCccCCCCCCccHH-HHHHhCCcHHHHHHH----HhCCCCCCcccCCCccHHHHHHhcCCHHH
Q psy3308         172 GHDN----VIDILIEKGAALYSKTKNGLAPL-HMASQGDHEAATRVL----IYHGAGVDEITVDYLTALHVASHCGHVRV  242 (838)
Q Consensus       172 g~~~----iv~~L~~~~~~~~~~~~~~~~~l-~~A~~~g~~~~v~~L----~~~~~~~~~~~~~~~~~l~~A~~~g~~~i  242 (838)
                      |..+    +.+-+.+.|...   +....+.+ ..++..|..+..+.+    .+.|...+.  ....+.+..-++.|.++-
T Consensus       203 g~~~~A~~lf~~M~~~g~~p---~~~t~~~ll~a~~~~~~~~~~~~l~~~~~~~g~~~d~--~~~n~Li~~y~k~g~~~~  277 (697)
T PLN03081        203 GNYREAFALFREMWEDGSDA---EPRTFVVMLRASAGLGSARAGQQLHCCVLKTGVVGDT--FVSCALIDMYSKCGDIED  277 (697)
T ss_pred             cCHHHHHHHHHHHHHhCCCC---ChhhHHHHHHHHhcCCcHHHHHHHHHHHHHhCCCccc--eeHHHHHHHHHHCCCHHH
Confidence            7654    233333444433   22222333 333445555444443    344543332  122344555667788777


Q ss_pred             HHHHHHCCCCccccccCCCchHHH-HHhhCCccccccChHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHH--
Q psy3308         243 AKTLLDRKADPNARALNGFTPLHI-ACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVEL--  319 (838)
Q Consensus       243 v~~L~~~~~~~~~~~~~~~~~l~~-a~~~~~~~~~~~~~~~i~~~Ll~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~--  319 (838)
                      +..+++.-..   ++...++.+.. .+..|..+    .-.++++.+.+.|..++....  .+.+...+..|.++..+.  
T Consensus       278 A~~vf~~m~~---~~~vt~n~li~~y~~~g~~~----eA~~lf~~M~~~g~~pd~~t~--~~ll~a~~~~g~~~~a~~i~  348 (697)
T PLN03081        278 ARCVFDGMPE---KTTVAWNSMLAGYALHGYSE----EALCLYYEMRDSGVSIDQFTF--SIMIRIFSRLALLEHAKQAH  348 (697)
T ss_pred             HHHHHHhCCC---CChhHHHHHHHHHHhCCCHH----HHHHHHHHHHHcCCCCCHHHH--HHHHHHHHhccchHHHHHHH
Confidence            7777764322   23334444443 33444332    235566666666776654321  233444455566654443  


Q ss_pred             --HHhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHH-HHcCcH----HHHHHHHHCCCC
Q psy3308         320 --LLKYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLA-ARANQT----DIVRILLRNGAS  392 (838)
Q Consensus       320 --L~~~~~~~~~~~~~~~~~l~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~l~~A-~~~g~~----~iv~~Ll~~g~~  392 (838)
                        +.+.|...+...  ..+.+..-++.|+++-...+++.-..+   +...++.|..+ +..|+.    ++++.+.+.|..
T Consensus       349 ~~m~~~g~~~d~~~--~~~Li~~y~k~G~~~~A~~vf~~m~~~---d~~t~n~lI~~y~~~G~~~~A~~lf~~M~~~g~~  423 (697)
T PLN03081        349 AGLIRTGFPLDIVA--NTALVDLYSKWGRMEDARNVFDRMPRK---NLISWNALIAGYGNHGRGTKAVEMFERMIAEGVA  423 (697)
T ss_pred             HHHHHhCCCCCeee--hHHHHHHHHHCCCHHHHHHHHHhCCCC---CeeeHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence              344554433221  223445556778877777777654433   33334454443 445553    344444456666


Q ss_pred             cccc
Q psy3308         393 VDAR  396 (838)
Q Consensus       393 ~~~~  396 (838)
                      ++..
T Consensus       424 Pd~~  427 (697)
T PLN03081        424 PNHV  427 (697)
T ss_pred             CCHH
Confidence            6543


No 128
>PLN03218 maturation of RBCL 1; Provisional
Probab=89.37  E-value=7.6  Score=46.51  Aligned_cols=311  Identities=14%  Similarity=0.103  Sum_probs=162.9

Q ss_pred             HHhHHHhcCCHHHHHHHHhccccccchhhcccCcchhhhccchhhhhcCcHHHHH----HHHHCCCCcccCCCCCCcHHH
Q psy3308          25 ALHIAAKKDDCKAAALLLEVSFSNTKLEVSLSNTKLEVSLSNTKFEATGQEEVAK----ILVDNGATINVQSLNGFTPLY  100 (838)
Q Consensus        25 al~~Aa~~g~~~~v~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~v~----~l~~~~~~~~~~~~~~~t~l~  100 (838)
                      .+...++.|+++-...+++.     -.+................+++.|..+.+.    ...+.|..++..  ...+.+.
T Consensus       443 LL~a~~k~g~~e~A~~lf~~-----M~~~Gl~pD~~tynsLI~~y~k~G~vd~A~~vf~eM~~~Gv~Pdvv--TynaLI~  515 (1060)
T PLN03218        443 LMSVCASSQDIDGALRVLRL-----VQEAGLKADCKLYTTLISTCAKSGKVDAMFEVFHEMVNAGVEANVH--TFGALID  515 (1060)
T ss_pred             HHHHHHhCcCHHHHHHHHHH-----HHHcCCCCCHHHHHHHHHHHHhCcCHHHHHHHHHHHHHcCCCCCHH--HHHHHHH
Confidence            46677888998877777761     011111112222223334456778776554    444456555532  2345566


Q ss_pred             HHHHcCcHHHH----HHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHH------cCCCCccccCCCCcHHHHHHH
Q psy3308         101 MAAQENHDGVV----RYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLIS------KGANIEAKTRDGLTPLHCAAR  170 (838)
Q Consensus       101 ~A~~~g~~~~v----~~L~~~~~~~~~~~~~~~~~l~~Aa~~g~~~iv~~L~~------~~~~~~~~~~~~~tal~~A~~  170 (838)
                      ..++.|+++-+    +.+.+.|..++...  ..+.+...++.|.++-...+++      .|..++.  ....+.+...++
T Consensus       516 gy~k~G~~eeAl~lf~~M~~~Gv~PD~vT--YnsLI~a~~k~G~~deA~~lf~eM~~~~~gi~PD~--vTynaLI~ay~k  591 (1060)
T PLN03218        516 GCARAGQVAKAFGAYGIMRSKNVKPDRVV--FNALISACGQSGAVDRAFDVLAEMKAETHPIDPDH--ITVGALMKACAN  591 (1060)
T ss_pred             HHHHCcCHHHHHHHHHHHHHcCCCCCHHH--HHHHHHHHHHCCCHHHHHHHHHHHHHhcCCCCCcH--HHHHHHHHHHHH
Confidence            67788888543    33445666655332  2345555678888765554443      2233221  112345667788


Q ss_pred             cCCHHHHHH----HHHcCCCccCCCCCCc-cHHHHHHhCCcHHHHHH----HHhCCCCCCcccCCCccHHHHHHhcCCHH
Q psy3308         171 SGHDNVIDI----LIEKGAALYSKTKNGL-APLHMASQGDHEAATRV----LIYHGAGVDEITVDYLTALHVASHCGHVR  241 (838)
Q Consensus       171 ~g~~~iv~~----L~~~~~~~~~~~~~~~-~~l~~A~~~g~~~~v~~----L~~~~~~~~~~~~~~~~~l~~A~~~g~~~  241 (838)
                      .|+++-+.-    +.+.+...   +...+ +.+...++.|..+-+.-    +.+.|..++...  ..+.+...+..|+.+
T Consensus       592 ~G~ldeA~elf~~M~e~gi~p---~~~tynsLI~ay~k~G~~deAl~lf~eM~~~Gv~PD~~T--ynsLI~a~~k~G~~e  666 (1060)
T PLN03218        592 AGQVDRAKEVYQMIHEYNIKG---TPEVYTIAVNSCSQKGDWDFALSIYDDMKKKGVKPDEVF--FSALVDVAGHAGDLD  666 (1060)
T ss_pred             CCCHHHHHHHHHHHHHcCCCC---ChHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCCHHH--HHHHHHHHHhCCCHH
Confidence            888774443    44444432   22222 34445567777644333    445666555322  234556667778866


Q ss_pred             HHHHH----HHCCCCccccccCCCchHHHHHhhCCccccccChHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHH-
Q psy3308         242 VAKTL----LDRKADPNARALNGFTPLHIACKKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKV-  316 (838)
Q Consensus       242 iv~~L----~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~i~~~Ll~~~~~~~~~~~~~~~~l~~A~~~g~~~~-  316 (838)
                      -+..+    .+.|..++...  ..+.+...++.|..+    .-.++++.+.+.|..++....  .+.+...++.|+++- 
T Consensus       667 eA~~l~~eM~k~G~~pd~~t--ynsLI~ay~k~G~~e----eA~~lf~eM~~~g~~Pdvvty--N~LI~gy~k~G~~eeA  738 (1060)
T PLN03218        667 KAFEILQDARKQGIKLGTVS--YSSLMGACSNAKNWK----KALELYEDIKSIKLRPTVSTM--NALITALCEGNQLPKA  738 (1060)
T ss_pred             HHHHHHHHHHHcCCCCCHHH--HHHHHHHHHhCCCHH----HHHHHHHHHHHcCCCCCHHHH--HHHHHHHHHCCCHHHH
Confidence            55444    44566555431  123344444455433    234566666667777765431  234444567787654 


Q ss_pred             ---HHHHHhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHH----HcCCCCC
Q psy3308         317 ---VELLLKYGASIAATTESGLTPLHVASFMGCMNIAIFLL----QAGAAPD  361 (838)
Q Consensus       317 ---v~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~iv~~Ll----~~~~~~~  361 (838)
                         ++.+.+.|..++...-  .+.+...++.|.++..+.++    +.|..++
T Consensus       739 lelf~eM~~~Gi~Pd~~Ty--~sLL~a~~k~G~le~A~~l~~~M~k~Gi~pd  788 (1060)
T PLN03218        739 LEVLSEMKRLGLCPNTITY--SILLVASERKDDADVGLDLLSQAKEDGIKPN  788 (1060)
T ss_pred             HHHHHHHHHcCCCCCHHHH--HHHHHHHHHCCCHHHHHHHHHHHHHcCCCCC
Confidence               3344455665543321  13445556678877666554    4455554


No 129
>PLN03077 Protein ECB2; Provisional
Probab=88.06  E-value=66  Score=38.41  Aligned_cols=208  Identities=12%  Similarity=0.008  Sum_probs=91.5

Q ss_pred             CcHHHHHHHcCcHHHHHHHHHCCCCCCccccCCCcHHH-HHHHcCCHHH----HHHHHHcCCCCccccCCCCcHHHHH-H
Q psy3308          96 FTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLH-VACKWGKVAM----VELLISKGANIEAKTRDGLTPLHCA-A  169 (838)
Q Consensus        96 ~t~l~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~~l~-~Aa~~g~~~i----v~~L~~~~~~~~~~~~~~~tal~~A-~  169 (838)
                      .+.+..-++.|+++-+..+++.-..++.   ..++.|. ..++.|..+-    .+.+...|..++..   ..+.+..| +
T Consensus       125 n~li~~~~~~g~~~~A~~~f~~m~~~d~---~~~n~li~~~~~~g~~~~A~~~f~~M~~~g~~Pd~~---t~~~ll~~~~  198 (857)
T PLN03077        125 NAMLSMFVRFGELVHAWYVFGKMPERDL---FSWNVLVGGYAKAGYFDEALCLYHRMLWAGVRPDVY---TFPCVLRTCG  198 (857)
T ss_pred             HHHHHHHHhCCChHHHHHHHhcCCCCCe---eEHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCChh---HHHHHHHHhC
Confidence            4445555777777777777766444332   2233333 3355666433    33333445544322   22233333 2


Q ss_pred             HcCCHH----HHHHHHHcCCCccCCCCCCccHHHHHHhCCcHHHHHHHHhCCCCCCcccCCCccHHHH-HHhcCCHH---
Q psy3308         170 RSGHDN----VIDILIEKGAALYSKTKNGLAPLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHV-ASHCGHVR---  241 (838)
Q Consensus       170 ~~g~~~----iv~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~~l~~-A~~~g~~~---  241 (838)
                      ..++++    +...+++.|...+.  ....+.+...++.|..+-...+++.-...+.   ...++|.. -+..|..+   
T Consensus       199 ~~~~~~~~~~~~~~~~~~g~~~~~--~~~n~Li~~y~k~g~~~~A~~lf~~m~~~d~---~s~n~li~~~~~~g~~~eAl  273 (857)
T PLN03077        199 GIPDLARGREVHAHVVRFGFELDV--DVVNALITMYVKCGDVVSARLVFDRMPRRDC---ISWNAMISGYFENGECLEGL  273 (857)
T ss_pred             CccchhhHHHHHHHHHHcCCCccc--chHhHHHHHHhcCCCHHHHHHHHhcCCCCCc---chhHHHHHHHHhCCCHHHHH
Confidence            333332    33333444443321  1223445555666777666666654322222   22233332 23445433   


Q ss_pred             -HHHHHHHCCCCccccccCCCchHHHHHh-hCCccccccChHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHH
Q psy3308         242 -VAKTLLDRKADPNARALNGFTPLHIACK-KNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVEL  319 (838)
Q Consensus       242 -iv~~L~~~~~~~~~~~~~~~~~l~~a~~-~~~~~~~~~~~~~i~~~Ll~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~  319 (838)
                       +.+.+.+.|..|+..   ..+.+..++. .+...    ...++.....+.|..++...  ..+.+...++.|+++-...
T Consensus       274 ~lf~~M~~~g~~Pd~~---ty~~ll~a~~~~g~~~----~a~~l~~~~~~~g~~~d~~~--~n~Li~~y~k~g~~~~A~~  344 (857)
T PLN03077        274 ELFFTMRELSVDPDLM---TITSVISACELLGDER----LGREMHGYVVKTGFAVDVSV--CNSLIQMYLSLGSWGEAEK  344 (857)
T ss_pred             HHHHHHHHcCCCCChh---HHHHHHHHHHhcCChH----HHHHHHHHHHHhCCccchHH--HHHHHHHHHhcCCHHHHHH
Confidence             223333345444322   2233333332 22221    12345555555665554322  1234445556677766666


Q ss_pred             HHhC
Q psy3308         320 LLKY  323 (838)
Q Consensus       320 L~~~  323 (838)
                      +++.
T Consensus       345 vf~~  348 (857)
T PLN03077        345 VFSR  348 (857)
T ss_pred             HHhh
Confidence            6553


No 130
>PLN03077 Protein ECB2; Provisional
Probab=84.38  E-value=99  Score=36.94  Aligned_cols=322  Identities=11%  Similarity=-0.000  Sum_probs=165.9

Q ss_pred             cHHhH-HHhcCCHHHHHHHHhccccccchhhcccCcchhhhccchhhhhcCcHHHHHH----HHHCCCCcccCCCCCCcH
Q psy3308          24 PALHI-AAKKDDCKAAALLLEVSFSNTKLEVSLSNTKLEVSLSNTKFEATGQEEVAKI----LVDNGATINVQSLNGFTP   98 (838)
Q Consensus        24 ~al~~-Aa~~g~~~~v~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~v~~----l~~~~~~~~~~~~~~~t~   98 (838)
                      ++|-. -++.|.++-...+++.-..        .+...+.. ....+++.|..+-+-.    ....|..++...  ..+.
T Consensus       125 n~li~~~~~~g~~~~A~~~f~~m~~--------~d~~~~n~-li~~~~~~g~~~~A~~~f~~M~~~g~~Pd~~t--~~~l  193 (857)
T PLN03077        125 NAMLSMFVRFGELVHAWYVFGKMPE--------RDLFSWNV-LVGGYAKAGYFDEALCLYHRMLWAGVRPDVYT--FPCV  193 (857)
T ss_pred             HHHHHHHHhCCChHHHHHHHhcCCC--------CCeeEHHH-HHHHHHhCCCHHHHHHHHHHHHHcCCCCChhH--HHHH
Confidence            44433 4789999888888762110        11112222 2234566677554433    334566655322  2233


Q ss_pred             HHHHHHcCcHHHH----HHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcHHH-HHHHcCC
Q psy3308          99 LYMAAQENHDGVV----RYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLH-CAARSGH  173 (838)
Q Consensus        99 l~~A~~~g~~~~v----~~L~~~~~~~~~~~~~~~~~l~~Aa~~g~~~iv~~L~~~~~~~~~~~~~~~tal~-~A~~~g~  173 (838)
                      |..++..+.++..    ..++..|..++..  ...+.+..-++.|+++-...+.+.-..   .|...+++|. ..++.|.
T Consensus       194 l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~--~~n~Li~~y~k~g~~~~A~~lf~~m~~---~d~~s~n~li~~~~~~g~  268 (857)
T PLN03077        194 LRTCGGIPDLARGREVHAHVVRFGFELDVD--VVNALITMYVKCGDVVSARLVFDRMPR---RDCISWNAMISGYFENGE  268 (857)
T ss_pred             HHHhCCccchhhHHHHHHHHHHcCCCcccc--hHhHHHHHHhcCCCHHHHHHHHhcCCC---CCcchhHHHHHHHHhCCC
Confidence            3333344555433    3344456554432  233556667888888888888776433   2333444444 4456676


Q ss_pred             HH----HHHHHHHcCCCccCCCCCCccHHH-HHHhCCcHHHHHHH----HhCCCCCCcccCCCccHHHHHHhcCCHHHHH
Q psy3308         174 DN----VIDILIEKGAALYSKTKNGLAPLH-MASQGDHEAATRVL----IYHGAGVDEITVDYLTALHVASHCGHVRVAK  244 (838)
Q Consensus       174 ~~----iv~~L~~~~~~~~~~~~~~~~~l~-~A~~~g~~~~v~~L----~~~~~~~~~~~~~~~~~l~~A~~~g~~~iv~  244 (838)
                      .+    +.+-+.+.|..+   +....+.+. .++..|..+..+-+    ...|...+..  ...+.+..-+..|.++-+.
T Consensus       269 ~~eAl~lf~~M~~~g~~P---d~~ty~~ll~a~~~~g~~~~a~~l~~~~~~~g~~~d~~--~~n~Li~~y~k~g~~~~A~  343 (857)
T PLN03077        269 CLEGLELFFTMRELSVDP---DLMTITSVISACELLGDERLGREMHGYVVKTGFAVDVS--VCNSLIQMYLSLGSWGEAE  343 (857)
T ss_pred             HHHHHHHHHHHHHcCCCC---ChhHHHHHHHHHHhcCChHHHHHHHHHHHHhCCccchH--HHHHHHHHHHhcCCHHHHH
Confidence            54    333334455443   333334433 34556666554444    3455544432  2234555667788888888


Q ss_pred             HHHHCCCCccccccCCCchHHHHH-hhCCccccccChHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHH--
Q psy3308         245 TLLDRKADPNARALNGFTPLHIAC-KKNRYKSSHCNHVWVAKTLLDRKADPNARALNGFTPLHIACKKNRYKVVELLL--  321 (838)
Q Consensus       245 ~L~~~~~~~~~~~~~~~~~l~~a~-~~~~~~~~~~~~~~i~~~Ll~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~L~--  321 (838)
                      .+++.-..+   +...++.+..+. +.|..+    .-+++++.+.+.|..|+....  .+.+...+..|.++....++  
T Consensus       344 ~vf~~m~~~---d~~s~n~li~~~~~~g~~~----~A~~lf~~M~~~g~~Pd~~t~--~~ll~a~~~~g~~~~a~~l~~~  414 (857)
T PLN03077        344 KVFSRMETK---DAVSWTAMISGYEKNGLPD----KALETYALMEQDNVSPDEITI--ASVLSACACLGDLDVGVKLHEL  414 (857)
T ss_pred             HHHhhCCCC---CeeeHHHHHHHHHhCCCHH----HHHHHHHHHHHhCCCCCceeH--HHHHHHHhccchHHHHHHHHHH
Confidence            888764332   334455555443 344332    245566666777777764321  23444455667766554444  


Q ss_pred             --hCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHH-HHcCcH
Q psy3308         322 --KYGASIAATTESGLTPLHVASFMGCMNIAIFLLQAGAAPDTATVRGETPLHLA-ARANQT  380 (838)
Q Consensus       322 --~~~~~~~~~~~~~~~~l~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~l~~A-~~~g~~  380 (838)
                        +.|...+..  -..+.+..-++.|..+-..-+++.-...   +...++.+..+ +..|..
T Consensus       415 ~~~~g~~~~~~--~~n~Li~~y~k~g~~~~A~~vf~~m~~~---d~vs~~~mi~~~~~~g~~  471 (857)
T PLN03077        415 AERKGLISYVV--VANALIEMYSKCKCIDKALEVFHNIPEK---DVISWTSIIAGLRLNNRC  471 (857)
T ss_pred             HHHhCCCcchH--HHHHHHHHHHHcCCHHHHHHHHHhCCCC---CeeeHHHHHHHHHHCCCH
Confidence              445433211  1122345567788888777777654332   22334444433 344543


No 131
>PF04053 Coatomer_WDAD:  Coatomer WD associated region ;  InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits.  This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=58.38  E-value=25  Score=37.46  Aligned_cols=93  Identities=11%  Similarity=0.054  Sum_probs=45.6

Q ss_pred             HHHHHHHhhcCCC------CCCCCcHHhHHHhcCCHHHHHHHHhccccccchhhcccCcchhhhccchhhhhcCcHHHHH
Q psy3308           6 DRVVAVLLENDTK------GKVKLPALHIAAKKDDCKAAALLLEVSFSNTKLEVSLSNTKLEVSLSNTKFEATGQEEVAK   79 (838)
Q Consensus         6 ~~iv~~l~~~~~~------~~~~~~al~~Aa~~g~~~~v~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~v~   79 (838)
                      -.++.||.+++..      .....+-|+.|.+-|++++..-+..          ...+...|..+. ..|-..|++++++
T Consensus       299 ~~i~~fL~~~G~~e~AL~~~~D~~~rFeLAl~lg~L~~A~~~a~----------~~~~~~~W~~Lg-~~AL~~g~~~lAe  367 (443)
T PF04053_consen  299 QSIARFLEKKGYPELALQFVTDPDHRFELALQLGNLDIALEIAK----------ELDDPEKWKQLG-DEALRQGNIELAE  367 (443)
T ss_dssp             HHHHHHHHHTT-HHHHHHHSS-HHHHHHHHHHCT-HHHHHHHCC----------CCSTHHHHHHHH-HHHHHTTBHHHHH
T ss_pred             HHHHHHHHHCCCHHHHHhhcCChHHHhHHHHhcCCHHHHHHHHH----------hcCcHHHHHHHH-HHHHHcCCHHHHH
Confidence            3466666666432      1122345777777777777665554          111222232222 3445566666666


Q ss_pred             HHHHCCCCcccCCCCCCcHHHHHHHcCcHHHHHHHHH
Q psy3308          80 ILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLS  116 (838)
Q Consensus        80 ~l~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~L~~  116 (838)
                      ...++..|+.       ..+......|+.+-++.|.+
T Consensus       368 ~c~~k~~d~~-------~L~lLy~~~g~~~~L~kl~~  397 (443)
T PF04053_consen  368 ECYQKAKDFS-------GLLLLYSSTGDREKLSKLAK  397 (443)
T ss_dssp             HHHHHCT-HH-------HHHHHHHHCT-HHHHHHHHH
T ss_pred             HHHHhhcCcc-------ccHHHHHHhCCHHHHHHHHH
Confidence            6665543332       33455555666665555543


No 132
>cd07920 Pumilio Pumilio-family RNA binding domain. Puf repeats (also labelled PUM-HD or Pumilio homology domain) mediate sequence specific RNA binding in fly Pumilio, worm FBF-1 and FBF-2, and many other proteins such as vertebrate Pumilio. These proteins function as translational repressors in early embryonic development by binding to sequences in the 3' UTR of target mRNAs, such as the nanos response element (NRE) in fly Hunchback mRNA, or the point mutation element (PME) in worm fem-3 mRNA. Other proteins that contain Puf domains are also plausible RNA binding proteins. Yeast PUF1 (JSN1), for instance, appears to contain a single RNA-recognition motif (RRM) domain. Puf repeat proteins have been observed to function asymmetrically and may be responsible for creating protein gradients involved in the specification of cell fate and differentiation. Puf domains usually occur as a tandem repeat of 8 domains. This model encompasses all 8 tandem repeats. Some proteins may have fewer (canon
Probab=50.67  E-value=1.5e+02  Score=30.14  Aligned_cols=24  Identities=8%  Similarity=0.084  Sum_probs=12.6

Q ss_pred             CCCCcHHHHHHHcCCHHHHHHHHh
Q psy3308         457 REDQTPLHVASRLGNGDIASLLLQ  480 (838)
Q Consensus       457 ~~~~~~l~~a~~~~~~~~v~~L~~  480 (838)
                      ..|.-.+......+..+....+++
T Consensus        19 ~~gsr~lQ~~l~~~~~~~~~~i~~   42 (322)
T cd07920          19 QHGSRFLQQKLEEATPEEKELIFD   42 (322)
T ss_pred             chhhHHHHHHhccCCHHHHHHHHH
Confidence            344455555555555555555444


No 133
>cd07920 Pumilio Pumilio-family RNA binding domain. Puf repeats (also labelled PUM-HD or Pumilio homology domain) mediate sequence specific RNA binding in fly Pumilio, worm FBF-1 and FBF-2, and many other proteins such as vertebrate Pumilio. These proteins function as translational repressors in early embryonic development by binding to sequences in the 3' UTR of target mRNAs, such as the nanos response element (NRE) in fly Hunchback mRNA, or the point mutation element (PME) in worm fem-3 mRNA. Other proteins that contain Puf domains are also plausible RNA binding proteins. Yeast PUF1 (JSN1), for instance, appears to contain a single RNA-recognition motif (RRM) domain. Puf repeat proteins have been observed to function asymmetrically and may be responsible for creating protein gradients involved in the specification of cell fate and differentiation. Puf domains usually occur as a tandem repeat of 8 domains. This model encompasses all 8 tandem repeats. Some proteins may have fewer (canon
Probab=41.65  E-value=1e+02  Score=31.39  Aligned_cols=112  Identities=12%  Similarity=0.135  Sum_probs=52.5

Q ss_pred             CCCCCcHhHHHHhcCCHH----HHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHH----CCCCCccCCCCCCc
Q psy3308         704 AKNGLTPLHLCAQEDKVN----VATITMFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVE----NGANVNATTNLGYT  775 (838)
Q Consensus       704 ~~~~~t~l~~A~~~g~~~----i~~~L~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~----~g~~~~~~~~~g~t  775 (838)
                      +..|...+.........+    +++.|..+-..+ ..|.+|...+..+...+..+..+.+++    +=..+ ..++.|..
T Consensus       162 ~~~G~~vvq~~l~~~~~~~~~~l~~~l~~~~~~L-~~d~~Gn~vvq~~l~~~~~~~~~~i~~~l~~~~~~l-~~~k~Gs~  239 (322)
T cd07920         162 HPYGCRVIQRCLEHCSEEQREPLLEEILEHALEL-VQDQFGNYVVQHVLELGDPDDTSRIIEKLLGNIVQL-SCHKFASN  239 (322)
T ss_pred             CccccHHHHHHHHhCCHHHHHHHHHHHHHHHHHH-hcCCchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHH-HcCcchHH
Confidence            445666666655554432    333333221111 345667767777776665443333333    21111 34566766


Q ss_pred             HHHHHHHhCc----HHHHHHHHhCCC-----CCCCCCCccch-HHHHHHcCC
Q psy3308         776 PLHQASQQGR----VLIIDLLLGAGA-----QPNATTNLFCC-ATILVKNGA  817 (838)
Q Consensus       776 ~l~~A~~~~~----~~~v~~Ll~~ga-----~~~~~~~~~~~-~~~~~~~~~  817 (838)
                      .+..+...+.    ..+++-++....     .-=..|..|.- ++.+.....
T Consensus       240 Vve~~l~~~~~~~~~~ii~~l~~~~~~~~~l~~l~~d~~Gn~Viq~~l~~~~  291 (322)
T cd07920         240 VVEKCLKHASKEERELIIDEILASGNETSALDTLMKDQYGNYVIQTALDVAK  291 (322)
T ss_pred             HHHHHHHHCCHHHHHHHHHHHhcCCCchhHHHHHhCCCcccHHHHHHHHhCC
Confidence            6776666654    334444443321     01123445554 555555444


No 134
>KOG1709|consensus
Probab=34.07  E-value=36  Score=31.38  Aligned_cols=39  Identities=26%  Similarity=0.171  Sum_probs=25.6

Q ss_pred             HhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCC
Q psy3308         727 MFNGAEIDPVTKAGFTPLHIASHFGQLNMVRYLVENGAN  765 (838)
Q Consensus       727 ~~~~~~~~~~~~~g~t~l~~A~~~g~~~~v~~Ll~~g~~  765 (838)
                      +++|+.+|..|....||=..|.+.++.+.-+.|++.|+.
T Consensus         2 le~ga~wn~id~~n~t~gd~a~ern~~rly~~lv~~gv~   40 (271)
T KOG1709|consen    2 LEYGAGWNFIDYENKTVGDLALERNQSRLYRRLVEAGVP   40 (271)
T ss_pred             cccCCCccccChhhCCchHHHHHccHHHHHHHHHHcCCc
Confidence            456666666666666666666666666666666666554


No 135
>PF04053 Coatomer_WDAD:  Coatomer WD associated region ;  InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits.  This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=21.40  E-value=1.6e+02  Score=31.50  Aligned_cols=128  Identities=9%  Similarity=-0.014  Sum_probs=60.7

Q ss_pred             HHHHHHcCcHHHHHHHHH-CCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcHHHHHHHcCCHHHH
Q psy3308          99 LYMAAQENHDGVVRYLLS-KGGNQTLATEHNITPLHVACKWGKVAMVELLISKGANIEAKTRDGLTPLHCAARSGHDNVI  177 (838)
Q Consensus        99 l~~A~~~g~~~~v~~L~~-~~~~~~~~~~~~~~~l~~Aa~~g~~~iv~~L~~~~~~~~~~~~~~~tal~~A~~~g~~~iv  177 (838)
                      +..|+.+++++-|..++. ...-+.++...|.....+--+.|..|+.--+.          .+-++=+.+|.+.|++++.
T Consensus       268 fk~av~~~d~~~v~~~i~~~~ll~~i~~~~~~~i~~fL~~~G~~e~AL~~~----------~D~~~rFeLAl~lg~L~~A  337 (443)
T PF04053_consen  268 FKTAVLRGDFEEVLRMIAASNLLPNIPKDQGQSIARFLEKKGYPELALQFV----------TDPDHRFELALQLGNLDIA  337 (443)
T ss_dssp             HHHHHHTT-HHH-----HHHHTGGG--HHHHHHHHHHHHHTT-HHHHHHHS----------S-HHHHHHHHHHCT-HHHH
T ss_pred             HHHHHHcCChhhhhhhhhhhhhcccCChhHHHHHHHHHHHCCCHHHHHhhc----------CChHHHhHHHHhcCCHHHH
Confidence            556777777766544444 22222233333444444444555555433331          1123456777777777776


Q ss_pred             HHHHHcCCCccCCCCCCc-cHHHHHHhCCcHHHHHHHHhCCCCCCcccCCCccHHHHHHhcCCHHHHHHHHH
Q psy3308         178 DILIEKGAALYSKTKNGL-APLHMASQGDHEAATRVLIYHGAGVDEITVDYLTALHVASHCGHVRVAKTLLD  248 (838)
Q Consensus       178 ~~L~~~~~~~~~~~~~~~-~~l~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~~l~~A~~~g~~~iv~~L~~  248 (838)
                      .-+.+...+     ...+ ..=..|...|++++++.-+++..+       ....+......|+.+-++.|.+
T Consensus       338 ~~~a~~~~~-----~~~W~~Lg~~AL~~g~~~lAe~c~~k~~d-------~~~L~lLy~~~g~~~~L~kl~~  397 (443)
T PF04053_consen  338 LEIAKELDD-----PEKWKQLGDEALRQGNIELAEECYQKAKD-------FSGLLLLYSSTGDREKLSKLAK  397 (443)
T ss_dssp             HHHCCCCST-----HHHHHHHHHHHHHTTBHHHHHHHHHHCT--------HHHHHHHHHHCT-HHHHHHHHH
T ss_pred             HHHHHhcCc-----HHHHHHHHHHHHHcCCHHHHHHHHHhhcC-------ccccHHHHHHhCCHHHHHHHHH
Confidence            655543211     1112 223445667777777776665322       2245556677777777777654


No 136
>cd03572 ENTH_epsin_related ENTH domain, Epsin Related family; composed of hypothetical proteins containing an ENTH-like domain. The epsin N-terminal homology (ENTH) domain is an evolutionarily conserved protein module found primarily in proteins that participate in clathrin-mediated endocytosis. A set of proteins previously designated as harboring an ENTH domain in fact contains a highly similar, yet unique module referred to as an AP180 N-terminal homology (ANTH) domain. ENTH and ANTH (E/ANTH) domains are structurally similar to the VHS domain and are composed of a superhelix of eight alpha helices. E/ANTH domains bind both inositol phospholipids and proteins and contribute to the nucleation and formation of clathrin coats on membranes. ENTH domains also function in the development of membrane curvature through lipid remodeling during the formation of clathrin-coated vesicles. E/ANTH-bearing proteins have recently been shown to function with adaptor protein-1 and GGA adaptors at the t
Probab=21.09  E-value=5.1e+02  Score=21.85  Aligned_cols=62  Identities=15%  Similarity=0.175  Sum_probs=34.2

Q ss_pred             cHHHHHHHHHCCCCcccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHH
Q psy3308          74 QEEVAKILVDNGATINVQSLNGFTPLYMAAQENHDGVVRYLLSKGGNQTLATEHNITPLHVACKWGKVAMVELLIS  149 (838)
Q Consensus        74 ~~~~v~~l~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~~l~~Aa~~g~~~iv~~L~~  149 (838)
                      .+.++++|.++|.          ..+-..++.+ ..+|+-+.+....++-.  .| ..+..+++.--.|++..|..
T Consensus        58 ~Lrilk~l~~~G~----------~~f~~~~~~~-~~~Ik~~~~f~g~~Dp~--~G-d~~~~~VR~~A~El~~~if~  119 (122)
T cd03572          58 VLKIIKHLCEKGN----------SDFKRELQRN-SAQIRECANYKGPPDPL--KG-DSLNEKVREEAQELIKAIFS  119 (122)
T ss_pred             HHHHHHHHHhhCC----------HHHHHHHHHh-HHHHHHHHHcCCCCCcc--cC-cchhHHHHHHHHHHHHHHhc
Confidence            5677888887762          1133333333 56888888865543321  22 23445555555566666654


No 137
>KOG1709|consensus
Probab=21.07  E-value=82  Score=29.19  Aligned_cols=39  Identities=18%  Similarity=0.164  Sum_probs=25.8

Q ss_pred             HHcCCCCccccCCCCcHHHHHHHcCCHHHHHHHHHcCCC
Q psy3308         148 ISKGANIEAKTRDGLTPLHCAARSGHDNVIDILIEKGAA  186 (838)
Q Consensus       148 ~~~~~~~~~~~~~~~tal~~A~~~g~~~iv~~L~~~~~~  186 (838)
                      +++|+.+|..|....|+=.+|.+.|+.++.+.|++.|+.
T Consensus         2 le~ga~wn~id~~n~t~gd~a~ern~~rly~~lv~~gv~   40 (271)
T KOG1709|consen    2 LEYGAGWNFIDYENKTVGDLALERNQSRLYRRLVEAGVP   40 (271)
T ss_pred             cccCCCccccChhhCCchHHHHHccHHHHHHHHHHcCCc
Confidence            456666666666666666677777777766666666544


Done!