RPS-BLAST 2.2.26 [Sep-21-2011]
Database: CDD.v3.10
44,354 sequences; 10,937,602 total letters
Searching..................................................done
Query= psy3318
(139 letters)
>gnl|CDD|143611 cd07587, ML_beta-AS, mammalian-like beta-alanine synthase (beta-AS)
and similar proteins (class 5 nitrilases). This
subgroup includes mammalian-like beta-AS (EC 3.5.1.6,
also known as beta-ureidopropionase or
N-carbamoyl-beta-alanine amidohydrolase). This enzyme
catalyzes the third and final step in the catabolic
pyrimidine catabolic pathway responsible for the
degradation of uracil and thymine, the hydrolysis of
N-carbamyl-beta-alanine and
N-carbamyl-beta-aminoisobutyrate to the beta-amino
acids, beta-alanine and beta-aminoisobutyrate
respectively. This subgroup belongs to a larger
nitrilase superfamily comprised of nitrile- or
amide-hydrolyzing enzymes and amide-condensing enzymes,
which depend on a Glu-Lys-Cys catalytic triad. This
superfamily has been classified in the literature based
on global and structure based sequence analysis into
thirteen different enzyme classes (referred to as 1-13),
this subgroup corresponds to class 5. Members of this
superfamily generally form homomeric complexes, the
basic building block of which is a homodimer. Beta-ASs
from this subgroup are found in various oligomeric
states, dimer (human), hexamer (calf liver), decamer
(Arabidopsis and Zea mays), and in the case of
Drosophila melanogaster beta-AS, as a homooctamer
assembled as a left-handed helical turn, with the
possibility of higher order oligomers formed by adding
dimers at either end. Rat beta-AS changes its oligomeric
state (hexamer, trimer, dodecamer) in response to
allosteric effectors. Eukaryotic Saccharomyces kluyveri
beta-AS belongs to a different superfamily.
Length = 363
Score = 132 bits (333), Expect = 3e-38
Identities = 57/117 (48%), Positives = 81/117 (69%), Gaps = 6/117 (5%)
Query: 10 VETILQKYIPEDELKLVNAVLYGEPLKKLYLPNS-----KSNEFNVVGYKFGAKPESSRP 64
+E +L+K++P +ELK V +LYGE +K L LP S K N+F + GYKF A PE +RP
Sbjct: 1 LEDLLEKHLPPEELKEVKRILYGEEVKPLELPESALDLAKENDFELKGYKFEAAPEQTRP 60
Query: 65 PRLVRVGIIQNHIGNSTVSCNVPQERSATYDRVEKLINAAGESGVNVLCLQEAWRRP 121
PR+VRVG+IQN I T + + ++R A +DR++K+I AA +GVN++C QEAW P
Sbjct: 61 PRIVRVGLIQNKIVLPT-TAPIAEQREAIHDRIKKIIEAAAMAGVNIICFQEAWTMP 116
>gnl|CDD|177792 PLN00202, PLN00202, beta-ureidopropionase.
Length = 405
Score = 106 bits (266), Expect = 3e-28
Identities = 48/124 (38%), Positives = 76/124 (61%), Gaps = 10/124 (8%)
Query: 7 FESVETILQKYIPEDELKLVNAVLYG----EPLKKLYLPN-----SKSNEFNVVGYKFGA 57
+ES+ +L +P + + V+ +L G P++ + LP SK+++F++ ++F A
Sbjct: 17 YESLHRLLSANLPPELFQEVSRLLLGLNCGRPVEMIALPEAAKALSKAHDFDLQAFRFTA 76
Query: 58 KPESSRPPRLVRVGIIQNHIGNSTVSCNVPQERSATYDRVEKLINAAGESGVNVLCLQEA 117
E R PR+VRVG+IQN I T + Q+R A D+V+ +I+AAG +GVN+LCLQEA
Sbjct: 77 DKEQLRAPRVVRVGLIQNSIALPTTAPFADQKR-AIMDKVKPMIDAAGAAGVNILCLQEA 135
Query: 118 WRRP 121
W P
Sbjct: 136 WTMP 139
>gnl|CDD|143592 cd07568, ML_beta-AS_like, mammalian-like beta-alanine synthase
(beta-AS) and similar proteins (class 5 nitrilases).
This family includes mammalian-like beta-AS (EC 3.5.1.6,
also known as beta-ureidopropionase or
N-carbamoyl-beta-alanine amidohydrolase). This enzyme
catalyzes the third and final step in the catabolic
pyrimidine catabolic pathway responsible for the
degradation of uracil and thymine, the hydrolysis of
N-carbamyl-beta-alanine and
N-carbamyl-beta-aminoisobutyrate to the beta-amino
acids, beta-alanine and beta-aminoisobutyrate
respectively. This family belongs to a larger nitrilase
superfamily comprised of nitrile- or amide-hydrolyzing
enzymes and amide-condensing enzymes, which depend on a
Glu-Lys-Cys catalytic triad. This superfamily has been
classified in the literature based on global and
structure based sequence analysis into thirteen
different enzyme classes (referred to as 1-13), this
subgroup corresponds to class 5. Members of this
superfamily generally form homomeric complexes, the
basic building block of which is a homodimer. Beta-ASs
from this subgroup are found in various oligomeric
states, dimer (human), hexamer (calf liver), decamer
(Arabidopsis and Zea mays), and in the case of
Drosophila melanogaster beta-AS, as a homooctamer
assembled as a left-handed helical turn, with the
possibility of higher order oligomers formed by adding
dimers at either end. Rat beta-AS changes its oligomeric
state (hexamer, trimer, dodecamer) in response to
allosteric effectors. Eukaryotic Saccharomyces kluyveri
beta-AS belongs to a different superfamily.
Length = 287
Score = 49.0 bits (117), Expect = 8e-08
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 66 RLVRVGIIQNHIGNSTVSCNVPQERSATYDRVEKLINAAGESGVNVLCLQEAWRRP 121
R+VRVG+IQ T + +++ A + +I A E+G ++CLQE + P
Sbjct: 2 RIVRVGLIQASNVIPT-DAPIEKQKEAMIQKHVTMIREAAEAGAQIVCLQEIFYGP 56
>gnl|CDD|143587 cd07197, nitrilase, Nitrilase superfamily, including nitrile- or
amide-hydrolyzing enzymes and amide-condensing enzymes.
This superfamily (also known as the C-N hydrolase
superfamily) contains hydrolases that break
carbon-nitrogen bonds; it includes nitrilases, cyanide
dihydratases, aliphatic amidases, N-terminal amidases,
beta-ureidopropionases, biotinidases, pantotheinase,
N-carbamyl-D-amino acid amidohydrolases, the glutaminase
domain of glutamine-dependent NAD+ synthetase,
apolipoprotein N-acyltransferases, and
N-carbamoylputrescine amidohydrolases, among others.
These enzymes depend on a Glu-Lys-Cys catalytic triad,
and work through a thiol acylenzyme intermediate.
Members of this superfamily generally form homomeric
complexes, the basic building block of which is a
homodimer. These oligomers include dimers, tetramers,
hexamers, octamers, tetradecamers, octadecamers, as well
as variable length helical arrangements and
homo-oligomeric spirals. These proteins have roles in
vitamin and co-enzyme metabolism, in detoxifying small
molecules, in the synthesis of signaling molecules, and
in the post-translational modification of proteins. They
are used industrially, as biocatalysts in the fine
chemical and pharmaceutical industry, in cyanide
remediation, and in the treatment of toxic effluent.
This superfamily has been classified previously in the
literature, based on global and structure-based sequence
analysis, into thirteen different enzyme classes
(referred to as 1-13). This hierarchy includes those
thirteen classes and a few additional subfamilies. A
putative distant relative, the plasmid-borne TraB
family, has not been included in the hierarchy.
Length = 253
Score = 35.0 bits (81), Expect = 0.007
Identities = 10/49 (20%), Positives = 19/49 (38%), Gaps = 8/49 (16%)
Query: 70 VGIIQNHIGNSTVSCNVPQERSATYDRVEKLINAAGESGVNVLCLQEAW 118
+ +Q V N+ + +LI A E G +++ L E +
Sbjct: 1 IAAVQLAPKIGDVEANL--------AKALRLIKEAAEQGADLIVLPELF 41
>gnl|CDD|143597 cd07573, CPA, N-carbamoylputrescine amidohydrolase (CPA) (class 11
nitrilases). CPA (EC 3.5.1.53, also known as
N-carbamoylputrescine amidase and carbamoylputrescine
hydrolase) converts N-carbamoylputrescine to putrescine,
a step in polyamine biosynthesis in plants and bacteria.
This subgroup includes Arabidopsis thaliana CPA, also
known as nitrilase-like 1 (NLP1), and Pseudomonas
aeruginosa AguB. This subgroup belongs to a larger
nitrilase superfamily comprised of nitrile- or
amide-hydrolyzing enzymes and amide-condensing enzymes,
which depend on a Glu-Lys-Cys catalytic triad. This
superfamily has been classified in the literature based
on global and structure based sequence analysis into
thirteen different enzyme classes (referred to as 1-13),
this subgroup corresponds to class 11. Members of this
superfamily generally form homomeric complexes, the
basic building block of which is a homodimer; P.
aeruginosa AugB is a homohexamer, Arabidopsis thaliana
NLP1 is a homooctomer.
Length = 284
Score = 31.0 bits (71), Expect = 0.15
Identities = 13/54 (24%), Positives = 21/54 (38%), Gaps = 9/54 (16%)
Query: 68 VRVGIIQNHIGNSTVSCNVPQERSATYDRVEKLINAAGESGVNVLCLQEAWRRP 121
V V ++Q A + E+L+ A G ++CLQE + P
Sbjct: 1 VTVALVQMACSED---------PEANLAKAEELVREAAAQGAQIVCLQELFETP 45
>gnl|CDD|216124 pfam00795, CN_hydrolase, Carbon-nitrogen hydrolase. This family
contains hydrolases that break carbon-nitrogen bonds.
The family includes: Nitrilase EC:3.5.5.1, Aliphatic
amidase EC:3.5.1.4, Biotidinase EC:3.5.1.12,
Beta-ureidopropionase EC:3.5.1.6. Nitrilase-related
proteins generally have a conserved E-K-C catalytic
triad, and are multimeric alpha-beta-beta-alpha sandwich
proteins.
Length = 172
Score = 30.7 bits (70), Expect = 0.16
Identities = 7/33 (21%), Positives = 15/33 (45%)
Query: 86 VPQERSATYDRVEKLINAAGESGVNVLCLQEAW 118
+ A ++ +LI A G +++ L E +
Sbjct: 10 SAFDLEANLQKLLELIEEAARQGADLVVLPELF 42
>gnl|CDD|236204 PRK08257, PRK08257, acetyl-CoA acetyltransferase; Validated.
Length = 498
Score = 30.3 bits (69), Expect = 0.34
Identities = 19/64 (29%), Positives = 26/64 (40%), Gaps = 18/64 (28%)
Query: 64 PPRLV--RVGIIQNHIGNSTVSCNVPQERSATYDRVEKLIN------AAGESGVNVLCLQ 115
PP L+ R+G S V N PQ +L+N AAGE+ V ++
Sbjct: 67 PPGLLAERLGADPARTVYSPVGGNSPQ----------RLVNEAALRIAAGEADVALVAGA 116
Query: 116 EAWR 119
EA
Sbjct: 117 EAQS 120
>gnl|CDD|223465 COG0388, COG0388, Predicted amidohydrolase [General function
prediction only].
Length = 274
Score = 29.0 bits (65), Expect = 0.64
Identities = 9/53 (16%), Positives = 19/53 (35%), Gaps = 8/53 (15%)
Query: 66 RLVRVGIIQNHIGNSTVSCNVPQERSATYDRVEKLINAAGESGVNVLCLQEAW 118
++RV Q + + R+ +LI A G +++ E +
Sbjct: 1 SMMRVAAAQMAP--------KAGDPAENLARILRLIREAAARGADLVVFPELF 45
>gnl|CDD|188634 cd00945, Aldolase_Class_I, Class I aldolases. Class I aldolases.
The class I aldolases use an active-site lysine which
stabilizes a reaction intermediates via Schiff base
formation, and have TIM beta/alpha barrel fold. The
members of this family include
2-keto-3-deoxy-6-phosphogluconate (KDPG) and
2-keto-4-hydroxyglutarate (KHG) aldolases,
transaldolase, dihydrodipicolinate synthase sub-family,
Type I 3-dehydroquinate dehydratase, DeoC and DhnA
proteins, and metal-independent
fructose-1,6-bisphosphate aldolase. Although
structurally similar, the class II aldolases use a
different mechanism and are believed to have an
independent evolutionary origin.
Length = 201
Score = 28.4 bits (64), Expect = 1.1
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
Query: 92 ATYDRVEKLINAAGESGVNVLCLQEAWRRP--DRY-GSQVYLIVK 133
AT + + KL + A E G +C+ + R D GS V +IV
Sbjct: 10 ATLEDIAKLCDEAIEYGFAAVCVNPGYVRLAADALAGSDVPVIVV 54
>gnl|CDD|143588 cd07564, nitrilases_CHs, Nitrilases, cyanide hydratase (CH)s, and
similar proteins (class 1 nitrilases). Nitrilases
(nitrile aminohydrolases, EC:3.5.5.1) hydrolyze nitriles
(RCN) to ammonia and the corresponding carboxylic acid.
Most nitrilases prefer aromatic nitriles, some prefer
arylacetonitriles and others aliphatic nitriles. This
group includes the nitrilase cyanide dihydratase (CDH),
which hydrolyzes inorganic cyanide (HCN) to produce
formate. It also includes cyanide hydratase (CH), which
hydrolyzes HCN to formamide. This group includes four
Arabidopsis thaliana nitrilases (Ath)NIT1-4. AthNIT1-3
have a strong substrate preference for
phenylpropionitrile (PPN) and other nitriles which may
originate from the breakdown of glucosinolates. The
product of PPN hydrolysis, phenylacetic acid has auxin
activity. AthNIT1-3 can also convert indoacetonitrile to
indole-3-acetic acid (IAA, auxin), but with a lower
affinity and velocity. From their expression patterns,
it has been speculated that NIT3 may produce IAA during
the early stages of germination, and that NIT3 may
produce IAA during embryo development and maturation.
AthNIT4 has a strong substrate specificity for the
nitrile, beta-cyano-L-alanine (Ala(CN)), an intermediate
of cyanide detoxification. AthNIT4 has both a nitrilase
activity and a nitrile hydratase (NHase) activity, which
generate aspartic acid and asparagine respectively from
Ala(CN). NHase catalyzes the hydration of nitriles to
their corresponding amides. This subgroup belongs to a
larger nitrilase superfamily comprised of belong to a
larger nitrilase superfamily comprised of nitrile- or
amide-hydrolyzing enzymes and amide-condensing enzymes,
which depend on a Glu-Lys-Cys catalytic triad. This
superfamily has been classified in the literature based
on global and structure based sequence analysis into
thirteen different enzyme classes (referred to as 1-13),
this subgroup corresponds to class 1.
Length = 297
Score = 28.2 bits (64), Expect = 1.4
Identities = 9/33 (27%), Positives = 18/33 (54%)
Query: 86 VPQERSATYDRVEKLINAAGESGVNVLCLQEAW 118
V + +AT ++ +LI A +G ++ EA+
Sbjct: 11 VFLDLAATVEKACRLIEEAAANGAQLVVFPEAF 43
>gnl|CDD|215398 PLN02747, PLN02747, N-carbamolyputrescine amidase.
Length = 296
Score = 27.4 bits (61), Expect = 2.3
Identities = 10/32 (31%), Positives = 18/32 (56%)
Query: 90 RSATYDRVEKLINAAGESGVNVLCLQEAWRRP 121
R+A D+ E+L+ A G N++ +QE +
Sbjct: 20 RAANVDKAERLVREAHAKGANIILIQELFEGY 51
>gnl|CDD|178120 PLN02504, PLN02504, nitrilase.
Length = 346
Score = 27.4 bits (61), Expect = 2.6
Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 12/64 (18%)
Query: 54 KFGAKPESSRPPRLVRVGIIQNHIGNSTVSCNVPQERSATYDRVEKLINAAGESGVNVLC 113
GA SS VR ++Q STV + P AT D+ E+LI A G ++
Sbjct: 15 DMGADASSST----VRATVVQA----STVFYDTP----ATLDKAERLIAEAAAYGSQLVV 62
Query: 114 LQEA 117
EA
Sbjct: 63 FPEA 66
>gnl|CDD|217320 pfam03016, Exostosin, Exostosin family. The EXT family is a family
of tumour suppressor genes. Mutations of EXT1 on 8q24.1,
EXT2 on 11p11-13, and EXT3 on 19p have been associated
with the autosomal dominant disorder known as hereditary
multiple exostoses (HME). This is the most common known
skeletal dysplasia. The chromosomal locations of other
EXT genes suggest association with other forms of
neoplasia. EXT1 and EXT2 have both been shown to encode
a heparan sulphate polymerase with both D-glucuronyl
(GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC)
transferase activities. The nature of the defect in
heparan sulphate biosynthesis in HME is unclear.
Length = 292
Score = 27.4 bits (61), Expect = 2.6
Identities = 10/66 (15%), Positives = 18/66 (27%), Gaps = 10/66 (15%)
Query: 62 SRPPRLVRVGIIQNHIGNSTVSCNVPQERSATYDRVEKLINAAGESGVNVLCLQEAWRRP 121
+R +I+ + C Q + +E L ++ CL
Sbjct: 186 GALANAIRDLLIEECKNSPDFQCEGNQSCGNPENYMELLRSS-------RFCLV---PPG 235
Query: 122 DRYGSQ 127
D S
Sbjct: 236 DTPTSP 241
>gnl|CDD|143596 cd07572, nit, Nit1, Nit 2, and related proteins, and the Nit1-like
domain of NitFhit (class 10 nitrilases). This subgroup
includes mammalian Nit1 and Nit2, the Nit1-like domain
of the invertebrate NitFhit, and various uncharacterized
bacterial and archaeal Nit-like proteins. Nit1 and Nit2
are candidate tumor suppressor proteins. In NitFhit, the
Nit1-like domain is encoded as a fusion protein with the
non-homologous tumor suppressor, fragile histidine triad
(Fhit). Mammalian Nit1 and Fhit may affect distinct
signal pathways, and both may participate in DNA
damage-induced apoptosis. Nit1 is a negative regulator
in T cells. Overexpression of Nit2 in HeLa cells leads
to a suppression of cell growth through cell cycle
arrest in G2. These Nit proteins and the Nit1-like
domain of NitFhit belong to a larger nitrilase
superfamily comprised of nitrile- or amide-hydrolyzing
enzymes and amide-condensing enzymes, which depend on a
Glu-Lys-Cys catalytic triad. This superfamily has been
classified in the literature based on global and
structure based sequence analysis into thirteen
different enzyme classes (referred to as 1-13), this
subgroup corresponds to class 10.
Length = 265
Score = 27.0 bits (61), Expect = 3.0
Identities = 12/50 (24%), Positives = 19/50 (38%), Gaps = 9/50 (18%)
Query: 69 RVGIIQNHIGNSTVSCNVPQERSATYDRVEKLINAAGESGVNVLCLQEAW 118
RV +IQ + A R ++LI A G ++ L E +
Sbjct: 1 RVALIQMTSTAD---------KEANLARAKELIEEAAAQGAKLVVLPECF 41
>gnl|CDD|143607 cd07583, nitrilase_5, Uncharacterized subgroup of the nitrilase
superfamily (putative class 13 nitrilases). The
nitrilase superfamily is comprised of nitrile- or
amide-hydrolyzing enzymes and amide-condensing enzymes,
which depend on a Glu-Lys-Cys catalytic triad. This
superfamily has been classified in the literature based
on global and structure based sequence analysis into
thirteen different enzyme classes (referred to as 1-13).
Class 13 represents proteins that at the time were
difficult to place in a distinct similarity group; this
subgroup represents either a new class or one that was
included previously in class 13. Members of this
superfamily generally form homomeric complexes, the
basic building block of which is a homodimer.
Length = 253
Score = 27.1 bits (61), Expect = 3.3
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 8/50 (16%)
Query: 69 RVGIIQNHIGNSTVSCNVPQERSATYDRVEKLINAAGESGVNVLCLQEAW 118
++ +IQ I V + A +RVE LI A +G +++ L E W
Sbjct: 1 KIALIQLDI--------VWGDPEANIERVESLIEEAAAAGADLIVLPEMW 42
>gnl|CDD|205288 pfam13107, DUF3964, Protein of unknown function (DUF3964). This
family of proteins is functionally uncharacterized.
This family of proteins is found in bacteria. Proteins
in this family are approximately 110 amino acids in
length. There are two conserved sequence motifs: FYF
and AFW.
Length = 109
Score = 26.3 bits (58), Expect = 3.6
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 7/51 (13%)
Query: 11 ETILQKYIPEDELKLVNAVLYGEPLKKLYLPNSKSNEF---NVVGYKFGAK 58
E I Q ED+ L +L E ++L+LP N+F GY+ G K
Sbjct: 4 ERIKQLPFFEDKPGLAEQILKLEKEEQLFLP----NQFEIKQTPGYEIGEK 50
>gnl|CDD|214963 smart00996, AdoHcyase, S-adenosyl-L-homocysteine hydrolase.
Length = 426
Score = 26.4 bits (59), Expect = 5.5
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 111 VLCLQEAWRRPDRYGSQVYLIVK 133
VL E + +P +Y + VY++ K
Sbjct: 361 VLAQIELFTKPGKYKNGVYVLPK 383
>gnl|CDD|143424 cd07106, ALDH_AldA-AAD23400, Streptomyces aureofaciens putative
aldehyde dehydrogenase AldA (AAD23400)-like. Putative
aldehyde dehydrogenase, AldA, from Streptomyces
aureofaciens (locus AAD23400) and other similar
sequences are present in this CD.
Length = 446
Score = 26.3 bits (59), Expect = 6.7
Identities = 23/93 (24%), Positives = 33/93 (35%), Gaps = 34/93 (36%)
Query: 35 LKKLYLPNSKSNEF----------NVVGYKFGAKPESSRPPRLVRVGIIQNHIGNSTVSC 84
+K+LY+ S +EF VVG G P +G +QN
Sbjct: 258 IKRLYVHESIYDEFCEALVALAKAAVVGD--GLDPG-------TTLGPVQN--------- 299
Query: 85 NVPQERSATYDRVEKLINAAGESGVNVLCLQEA 117
YD+V++L+ A G VL E
Sbjct: 300 ------KMQYDKVKELVEDAKAKGAKVLAGGEP 326
>gnl|CDD|237368 PRK13374, PRK13374, purine nucleoside phosphorylase; Provisional.
Length = 233
Score = 26.2 bits (58), Expect = 6.8
Identities = 21/77 (27%), Positives = 28/77 (36%), Gaps = 28/77 (36%)
Query: 55 FGAKPESSRPPRLVRVG---IIQNHI---------GNSTVSCNVPQER--------SATY 94
FG K ++RVG Q+ + G ST S + R A Y
Sbjct: 81 FGVK-------NIIRVGSCGATQDDVKLMDVIIAQGASTDS-KTNRIRFSGHDFAAIADY 132
Query: 95 DRVEKLINAAGESGVNV 111
+EK + A E GV V
Sbjct: 133 QLLEKAVETAREKGVPV 149
>gnl|CDD|223576 COG0502, BioB, Biotin synthase and related enzymes [Coenzyme
metabolism].
Length = 335
Score = 25.7 bits (57), Expect = 8.8
Identities = 10/51 (19%), Positives = 18/51 (35%)
Query: 84 CNVPQERSATYDRVEKLINAAGESGVNVLCLQEAWRRPDRYGSQVYLIVKR 134
V + + + + A +G C+ A R P R +V +K
Sbjct: 76 TGVKARKLMEVEEILEAAKKAKAAGATRFCMGAAGRGPGRDMEEVVEAIKA 126
Database: CDD.v3.10
Posted date: Mar 20, 2013 7:55 AM
Number of letters in database: 10,937,602
Number of sequences in database: 44,354
Lambda K H
0.314 0.133 0.382
Gapped
Lambda K H
0.267 0.0810 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 6,943,039
Number of extensions: 593352
Number of successful extensions: 427
Number of sequences better than 10.0: 1
Number of HSP's gapped: 422
Number of HSP's successfully gapped: 28
Length of query: 139
Length of database: 10,937,602
Length adjustment: 87
Effective length of query: 52
Effective length of database: 7,078,804
Effective search space: 368097808
Effective search space used: 368097808
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 54 (24.4 bits)