BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3328
(337 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6PBU5|GRT1A_DANRE Growth hormone-regulated TBC protein 1-A OS=Danio rerio GN=grtp1a
PE=2 SV=1
Length = 356
Score = 220 bits (561), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 105/240 (43%), Positives = 155/240 (64%), Gaps = 11/240 (4%)
Query: 24 IWMIISEADTLKKVTHQTRHYGTGGYYAFMLNNKILDPDIGETIRTDLPRTFPENIFFRN 83
+WM+ S A Q + GYY +L+ +P + E+IRTDL RTFP+NI+FR
Sbjct: 96 VWMVCSGA--------QEQMDRNPGYYQSLLDTH-HEPKLEESIRTDLHRTFPDNIYFRK 146
Query: 84 SLEH--QQQLSRILKVFALDEKNIGYCQGLNYIAALILLVTKHEENTYWIFRSVINKYFS 141
S E QQ L +L + K +GYCQG+N+IA ++LV+K EE ++W+ +++++
Sbjct: 147 SAEPCLQQALYNVLVAYGHHNKAVGYCQGMNFIAGYLILVSKDEETSFWLMEALLSRILP 206
Query: 142 DYYTKTLTGVVRDIDVLSELVKIKMPHLYDHISKVGVPWPVIATKWFICMFADVLPVETV 201
DYYT + G+ D +VL ELV++K P ++ + GV W ++ ++WFIC+F DVLPVETV
Sbjct: 207 DYYTPAMLGLKTDQEVLGELVRLKAPAVWKLMQDQGVMWTLVVSRWFICLFIDVLPVETV 266
Query: 202 LRIWDCLFVEGPKILFRVSLTLIKLHERALLECEDFTTLVECFKSMVRSPAVLNCHSFMS 261
LRIWDCLF EG KILFRV+LTLI+ H++ + E ++ + E FK + R V +CH+FM
Sbjct: 267 LRIWDCLFYEGSKILFRVALTLIRHHQQEIAEAQNLPDVCERFKRITRGAFVEDCHTFMQ 326
Score = 55.5 bits (132), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 38/58 (65%)
Query: 258 SFMSGLNYIAALILLVTKHEENTYWIFRSVINKYFSDYYTKTLTGVVRDIDVLSELVN 315
+ G+N+IA ++LV+K EE ++W+ +++++ DYYT + G+ D +VL ELV
Sbjct: 171 GYCQGMNFIAGYLILVSKDEETSFWLMEALLSRILPDYYTPAMLGLKTDQEVLGELVR 228
>sp|Q5TC63|GRTP1_HUMAN Growth hormone-regulated TBC protein 1 OS=Homo sapiens GN=GRTP1
PE=1 SV=4
Length = 336
Score = 206 bits (525), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 95/240 (39%), Positives = 152/240 (63%), Gaps = 11/240 (4%)
Query: 24 IWMIISEADTLKKVTHQTRHYGTGGYYAFMLNNKILDPDIGETIRTDLPRTFPENIFFRN 83
+WM++S A Q + GYY +L + +P + + IRTDL RTFP+N+ FR
Sbjct: 77 VWMVLSGA--------QAQMDQNPGYYHQLLQGE-RNPRLEDAIRTDLNRTFPDNVKFRK 127
Query: 84 SLEH--QQQLSRILKVFALDEKNIGYCQGLNYIAALILLVTKHEENTYWIFRSVINKYFS 141
+ + Q+ L +L + + +GYCQG+N+IA ++L+T +EE ++W+ +++ +
Sbjct: 128 TTDPCLQRTLYNVLLAYGHHNQGVGYCQGMNFIAGYLILITNNEEESFWLLDALVGRILP 187
Query: 142 DYYTKTLTGVVRDIDVLSELVKIKMPHLYDHISKVGVPWPVIATKWFICMFADVLPVETV 201
DYY+ + G+ D +VL ELV+ K+P + + ++GV W ++ ++WFIC+F D+LPVETV
Sbjct: 188 DYYSPAMLGLKTDQEVLGELVRAKLPAVGALMERLGVLWTLLVSRWFICLFVDILPVETV 247
Query: 202 LRIWDCLFVEGPKILFRVSLTLIKLHERALLECEDFTTLVECFKSMVRSPAVLNCHSFMS 261
LRIWDCLF EG KI+FRV+LTLIK H+ +LE + + FK + + V+ CH+FM
Sbjct: 248 LRIWDCLFNEGSKIIFRVALTLIKQHQELILEATSVPDICDKFKQITKGSFVMECHTFMQ 307
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 37/58 (63%)
Query: 258 SFMSGLNYIAALILLVTKHEENTYWIFRSVINKYFSDYYTKTLTGVVRDIDVLSELVN 315
+ G+N+IA ++L+T +EE ++W+ +++ + DYY+ + G+ D +VL ELV
Sbjct: 152 GYCQGMNFIAGYLILITNNEEESFWLLDALVGRILPDYYSPAMLGLKTDQEVLGELVR 209
>sp|Q6GL87|GRTP1_XENTR Growth hormone-regulated TBC protein 1 OS=Xenopus tropicalis
GN=grtp1 PE=2 SV=1
Length = 342
Score = 204 bits (518), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 95/240 (39%), Positives = 147/240 (61%), Gaps = 10/240 (4%)
Query: 24 IWMIISEADTLKKVTHQTRHYGTGGYYAFMLNNKILDPDIGETIRTDLPRTFPENIFFRN 83
+WM++S A Q + GY+ M +P + + + TDL RTFP+N+ F+
Sbjct: 81 VWMVVSGA--------QAQMDMNTGYFRRMFTEGEKNPKLLDLVITDLNRTFPDNVLFQK 132
Query: 84 SLEH--QQQLSRILKVFALDEKNIGYCQGLNYIAALILLVTKHEENTYWIFRSVINKYFS 141
+ Q+ L +L + K +GYCQG+N+IA ++LVTK EE +W+ ++I +
Sbjct: 133 NANPSLQKDLYNVLVAYGQHNKTVGYCQGMNFIAGYLILVTKDEEKAFWLMDALIGQILP 192
Query: 142 DYYTKTLTGVVRDIDVLSELVKIKMPHLYDHISKVGVPWPVIATKWFICMFADVLPVETV 201
DYY+ +TG+ D +VL +LVK K+P + I GV W ++ ++WFIC+F D+LPVETV
Sbjct: 193 DYYSPAMTGLKTDQEVLGDLVKKKIPSVAQLIETHGVMWTLLVSRWFICLFIDILPVETV 252
Query: 202 LRIWDCLFVEGPKILFRVSLTLIKLHERALLECEDFTTLVECFKSMVRSPAVLNCHSFMS 261
LRIWDCLF EG K++FRV+LTLIK + +++E +F + + FK + + V +CH FM
Sbjct: 253 LRIWDCLFFEGSKVIFRVALTLIKQSQASIMEARNFPDICDKFKEITKGEFVTDCHYFMQ 312
Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 37/57 (64%)
Query: 258 SFMSGLNYIAALILLVTKHEENTYWIFRSVINKYFSDYYTKTLTGVVRDIDVLSELV 314
+ G+N+IA ++LVTK EE +W+ ++I + DYY+ +TG+ D +VL +LV
Sbjct: 157 GYCQGMNFIAGYLILVTKDEEKAFWLMDALIGQILPDYYSPAMTGLKTDQEVLGDLV 213
>sp|Q6GLZ0|GRTP1_XENLA Growth hormone-regulated TBC protein 1 OS=Xenopus laevis GN=grtp1
PE=2 SV=1
Length = 342
Score = 203 bits (517), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 97/240 (40%), Positives = 146/240 (60%), Gaps = 10/240 (4%)
Query: 24 IWMIISEADTLKKVTHQTRHYGTGGYYAFMLNNKILDPDIGETIRTDLPRTFPENIFFRN 83
+WM++S A Q + GY+ M +P + + + TDL RTFP+N+ FR
Sbjct: 81 VWMVVSGA--------QAQMGMNTGYFRRMFIEGEKNPKLLDLVNTDLNRTFPDNVQFRK 132
Query: 84 SLEH--QQQLSRILKVFALDEKNIGYCQGLNYIAALILLVTKHEENTYWIFRSVINKYFS 141
+ Q+ L +L + +GYCQG+N+IA ++LVTK EE +W+ ++I +
Sbjct: 133 NSNPSLQKHLYNVLVAYGQHNTTVGYCQGMNFIAGYLILVTKDEEKAFWLMDALIGRILP 192
Query: 142 DYYTKTLTGVVRDIDVLSELVKIKMPHLYDHISKVGVPWPVIATKWFICMFADVLPVETV 201
DYY+ +TG+ D +VL +LVK K+P + I GV W ++ ++WFIC+F D+LPVETV
Sbjct: 193 DYYSPAMTGLKTDQEVLGDLVKKKLPAVSQLIEAHGVMWTLLVSRWFICLFIDILPVETV 252
Query: 202 LRIWDCLFVEGPKILFRVSLTLIKLHERALLECEDFTTLVECFKSMVRSPAVLNCHSFMS 261
LRIWDCLF EG K+LFRV+LTLIK ++ +LE +F + + FK + + V +CH FM
Sbjct: 253 LRIWDCLFFEGSKVLFRVALTLIKQYQAFILEARNFPDICDKFKEITKGEFVTDCHYFMQ 312
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 37/57 (64%)
Query: 258 SFMSGLNYIAALILLVTKHEENTYWIFRSVINKYFSDYYTKTLTGVVRDIDVLSELV 314
+ G+N+IA ++LVTK EE +W+ ++I + DYY+ +TG+ D +VL +LV
Sbjct: 157 GYCQGMNFIAGYLILVTKDEEKAFWLMDALIGRILPDYYSPAMTGLKTDQEVLGDLV 213
>sp|Q9D3N8|GRTP1_MOUSE Growth hormone-regulated TBC protein 1 OS=Mus musculus GN=Grtp1
PE=2 SV=1
Length = 359
Score = 198 bits (504), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 98/257 (38%), Positives = 151/257 (58%), Gaps = 28/257 (10%)
Query: 24 IWMIISEADTLKKVTHQTRHYGTGGYYAFMLNNKILDPDIGETIRTDLPRTFPENIFFRN 83
+WM +S A Q R + GYY +L + + E IRTDL RTFP+N+ FR
Sbjct: 83 VWMAVSGA--------QARMDQSPGYYHRLLEGES-SSSLDEAIRTDLNRTFPDNVMFRK 133
Query: 84 SLEH--QQQLSRILKVFALDEKNIGYCQ-----------------GLNYIAALILLVTKH 124
+ + Q+ L +L + L ++GYCQ G+N+IA ++L+TK+
Sbjct: 134 TADPCLQKTLYNVLLAYGLHNPDVGYCQCCAQKPGSSAGLRSSLTGMNFIAGYLILITKN 193
Query: 125 EENTYWIFRSVINKYFSDYYTKTLTGVVRDIDVLSELVKIKMPHLYDHISKVGVPWPVIA 184
EE ++W+ +++ + DYY+ + G+ D +VL+ELV++K+P + + GV W ++
Sbjct: 194 EEESFWLLDALVGRILPDYYSPAMLGLKTDQEVLAELVRMKLPAVAALMDGHGVLWTLLV 253
Query: 185 TKWFICMFADVLPVETVLRIWDCLFVEGPKILFRVSLTLIKLHERALLECEDFTTLVECF 244
++WFIC+F D+LPVETVLRIWDCLF EG KI+FRV+LTLIK H+ +LE + + F
Sbjct: 254 SRWFICLFVDILPVETVLRIWDCLFNEGSKIIFRVALTLIKQHQEFILEASSIPDICDKF 313
Query: 245 KSMVRSPAVLNCHSFMS 261
K + + V CH+FM
Sbjct: 314 KQITKGDFVTECHAFMQ 330
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Query: 242 ECFKSMVRSPAVLNCHSFMSGLNYIAALILLVTKHEENTYWIFRSVINKYFSDYYTKTLT 301
+C S A L S ++G+N+IA ++L+TK+EE ++W+ +++ + DYY+ +
Sbjct: 161 QCCAQKPGSSAGL--RSSLTGMNFIAGYLILITKNEEESFWLLDALVGRILPDYYSPAML 218
Query: 302 GVVRDIDVLSELVN 315
G+ D +VL+ELV
Sbjct: 219 GLKTDQEVLAELVR 232
>sp|Q4QQU7|GRTP1_RAT Growth hormone-regulated TBC protein 1 OS=Rattus norvegicus
GN=Grtp1 PE=2 SV=1
Length = 289
Score = 195 bits (495), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 85/195 (43%), Positives = 133/195 (68%), Gaps = 2/195 (1%)
Query: 69 TDLPRTFPENIFFRNSLEH--QQQLSRILKVFALDEKNIGYCQGLNYIAALILLVTKHEE 126
TDL RTFP+N+ FR + + Q+ L +L + L +++GYCQG+N+IA ++L+TK+EE
Sbjct: 66 TDLNRTFPDNVMFRKTADPCLQKTLYNVLLAYGLHNQDVGYCQGMNFIAGYLILITKNEE 125
Query: 127 NTYWIFRSVINKYFSDYYTKTLTGVVRDIDVLSELVKIKMPHLYDHISKVGVPWPVIATK 186
++W+ +++ + DYY+ + G+ D +VL+ELV++K+P + + GV W ++ ++
Sbjct: 126 ESFWLLDALVGRILPDYYSPAMLGLKTDQEVLAELVRMKLPAVAALMDGHGVLWTLLVSR 185
Query: 187 WFICMFADVLPVETVLRIWDCLFVEGPKILFRVSLTLIKLHERALLECEDFTTLVECFKS 246
WFIC+F D+LPVETVLRIWDCLF EG KI+FRV+LTLIK H+ +LE + + FK
Sbjct: 186 WFICLFVDILPVETVLRIWDCLFNEGSKIIFRVALTLIKQHQEFILEASSVPDICDKFKQ 245
Query: 247 MVRSPAVLNCHSFMS 261
+ + V CH+FM
Sbjct: 246 ITKGDFVTECHTFMQ 260
Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 39/58 (67%)
Query: 258 SFMSGLNYIAALILLVTKHEENTYWIFRSVINKYFSDYYTKTLTGVVRDIDVLSELVN 315
+ G+N+IA ++L+TK+EE ++W+ +++ + DYY+ + G+ D +VL+ELV
Sbjct: 105 GYCQGMNFIAGYLILITKNEEESFWLLDALVGRILPDYYSPAMLGLKTDQEVLAELVR 162
>sp|Q09445|GRTP6_CAEEL Growth hormone-regulated TBC protein 6 OS=Caenorhabditis elegans
GN=tbc-6 PE=4 SV=3
Length = 330
Score = 134 bits (337), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/201 (35%), Positives = 116/201 (57%), Gaps = 3/201 (1%)
Query: 61 PD-IGETIRTDLPRTFPENIFFRNSLEHQQQLSRILKVFALDEKNIGYCQGLNYIAALIL 119
PD + + I+ DLPRTFP+N F + ++ L R L A ++GYCQGLN++A +IL
Sbjct: 106 PDEVIKQIKLDLPRTFPDNKFLKTE-GTRKTLGRALFAVAEHIPSVGYCQGLNFVAGVIL 164
Query: 120 LVTKHEENTYWIFRSVINKYFSDYYTKTLTGVVRDIDVLSELVKIKMPHLYDHISKVGVP 179
LV E + ++++ +YY K + G+ RD+ VL L++ P + + K+ V
Sbjct: 165 LVVNDESRAIDLLVHLVSQR-QEYYGKNMIGLRRDMHVLHSLLREHCPRVVVTLEKLDVG 223
Query: 180 WPVIATKWFICMFADVLPVETVLRIWDCLFVEGPKILFRVSLTLIKLHERALLECEDFTT 239
++ KWF+C F + LP+ETVLR+WDCL EG + LFR+++ L + + A+ CE
Sbjct: 224 LDMLVGKWFVCWFVESLPMETVLRLWDCLIYEGDEWLFRIAVALFRSNMIAISSCESIDQ 283
Query: 240 LVECFKSMVRSPAVLNCHSFM 260
L+ +++ S A L CH +
Sbjct: 284 LMTEVQNIGTSKAALYCHQLI 304
Score = 38.5 bits (88), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Query: 251 PAVLNCHSFMSGLNYIAALILLVTKHEENTYWIFRSVINKYFSDYYTKTLTGVVRDIDVL 310
P+V C GLN++A +ILLV E + ++++ +YY K + G+ RD+ VL
Sbjct: 148 PSVGYCQ----GLNFVAGVILLVVNDESRAIDLLVHLVSQR-QEYYGKNMIGLRRDMHVL 202
Query: 311 SELVNDYYTKTL 322
L+ ++ + +
Sbjct: 203 HSLLREHCPRVV 214
>sp|Q8IV04|TB10C_HUMAN Carabin OS=Homo sapiens GN=TBC1D10C PE=1 SV=1
Length = 446
Score = 128 bits (322), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 83/268 (30%), Positives = 127/268 (47%), Gaps = 12/268 (4%)
Query: 1 MYKKKKKKKEEAEIKHTSTFDFSIWMIISEADTLKKVTHQTRHYGTGGYYAFMLNNKILD 60
M ++ KK K + S W ++ A +K + G Y L D
Sbjct: 78 MSRRYKKVKMQCRKGIPSALRARCWPLLCGAHVCQKNS-------PGTYQE--LAEAPGD 128
Query: 61 PDIGETIRTDLPRTFPENIFFRNSLEHQQQ-LSRILKVFALDEKNIGYCQGLNYIAALIL 119
P ETI DL R FP + F + H QQ L ++LK + L GYCQ +AA++L
Sbjct: 129 PQWMETIGRDLHRQFPLHEMFVSPQGHGQQGLLQVLKAYTLYRPEQGYCQAQGPVAAVLL 188
Query: 120 LVTKHEENTYWIFRSVINKYFSDYYTKTLTGVVRDIDVLSELVKIKMPHLYDHISKVGVP 179
+ EE +W + Y YY + V D +V L++ +PH++ H+ +VGV
Sbjct: 189 MHLPPEE-AFWCLVQICEVYLPGYYGPHMEAVRLDAEVFMALLRRLLPHVHKHLQQVGVG 247
Query: 180 WPVIATKWFICMFADVLPVETVLRIWDCLFVEGPKILFRVSLTLIKLHERALLECEDFTT 239
+ +WF+C+FA LP TVLR+WD EG ++LFRV LTL++L +
Sbjct: 248 PLLYLPEWFLCLFARSLPFPTVLRVWDAFLSEGARVLFRVGLTLVRLALGTAEQRGACPG 307
Query: 240 LVECFKSMVR-SPAVLNCHSFMSGLNYI 266
L+E ++ PA L +FMS ++ +
Sbjct: 308 LLETLGALRAIPPAQLQEEAFMSQVHSV 335
>sp|B1AVH7|TBD2A_MOUSE TBC1 domain family member 2A OS=Mus musculus GN=Tbc1d2 PE=2 SV=1
Length = 922
Score = 128 bits (322), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 71/203 (34%), Positives = 109/203 (53%), Gaps = 3/203 (1%)
Query: 37 VTHQTRH-YGTGGYYAFMLNNKILDPDIGETIRTDLPRTFPENIFFR-NSLEHQQQLSRI 94
V + RH G Y + + + I DL RTFP N F + +L R+
Sbjct: 633 VHRRVRHLQAPGCYQELLARGRACEHPAARQIELDLNRTFPTNKHFTCPTSSFPDKLRRV 692
Query: 95 LKVFALDEKNIGYCQGLNYIAALILLVTKHEENTYWIFRSVINKYF-SDYYTKTLTGVVR 153
L F+ IGYCQGLN +AA+ LLV + EE+ +W +++ ++YY+KTLT
Sbjct: 693 LLAFSWQNPTIGYCQGLNRLAAIALLVLEDEESAFWCLVAIVETILPAEYYSKTLTASQV 752
Query: 154 DIDVLSELVKIKMPHLYDHISKVGVPWPVIATKWFICMFADVLPVETVLRIWDCLFVEGP 213
D VL +L+ K+P L H+ + V +I WF+ +FAD L + +LR+WD EG
Sbjct: 753 DQRVLQDLLSEKLPRLTAHLGQHRVDLSLITFNWFLVVFADSLISDILLRVWDAFLYEGT 812
Query: 214 KILFRVSLTLIKLHERALLECED 236
K++FR +L + K +E A+L+ +D
Sbjct: 813 KVVFRYALAIFKYNEEAILQLQD 835
Score = 45.1 bits (105), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 258 SFMSGLNYIAALILLVTKHEENTYWIFRSVINKYF-SDYYTKTLTGVVRDIDVLSELVND 316
+ GLN +AA+ LLV + EE+ +W +++ ++YY+KTLT D VL +L+++
Sbjct: 704 GYCQGLNRLAAIALLVLEDEESAFWCLVAIVETILPAEYYSKTLTASQVDQRVLQDLLSE 763
>sp|B5DFA1|TBD2A_RAT TBC1 domain family member 2A OS=Rattus norvegicus GN=Tbc1d2 PE=2
SV=1
Length = 924
Score = 127 bits (320), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 106/195 (54%), Gaps = 2/195 (1%)
Query: 44 YGTGGYYAFMLNNKILDPDIGETIRTDLPRTFPENIFFR-NSLEHQQQLSRILKVFALDE 102
+ +G Y + + + I DL RTFP N F + +L R+L F+
Sbjct: 643 HSSGCYQELLARGRACEHPAARQIELDLNRTFPTNKHFTCPTSSFPDKLRRVLLAFSWQN 702
Query: 103 KNIGYCQGLNYIAALILLVTKHEENTYWIFRSVINKYF-SDYYTKTLTGVVRDIDVLSEL 161
IGYCQGLN +AA+ LLV + EE+ +W +++ ++YY+KTLT D VL +L
Sbjct: 703 PTIGYCQGLNRLAAIALLVLEDEESAFWCLVAIVETILPAEYYSKTLTASQVDQRVLQDL 762
Query: 162 VKIKMPHLYDHISKVGVPWPVIATKWFICMFADVLPVETVLRIWDCLFVEGPKILFRVSL 221
+ K+P L H+ + V +I WF+ +FAD L + +LR+WD EG K++FR +L
Sbjct: 763 LSEKLPRLTAHLGQRHVDLSLITFNWFLVIFADSLISDILLRVWDAFLYEGTKVVFRYAL 822
Query: 222 TLIKLHERALLECED 236
+ K +E A+L +D
Sbjct: 823 AIFKYNEEAILRLQD 837
Score = 45.1 bits (105), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 258 SFMSGLNYIAALILLVTKHEENTYWIFRSVINKYF-SDYYTKTLTGVVRDIDVLSELVND 316
+ GLN +AA+ LLV + EE+ +W +++ ++YY+KTLT D VL +L+++
Sbjct: 706 GYCQGLNRLAAIALLVLEDEESAFWCLVAIVETILPAEYYSKTLTASQVDQRVLQDLLSE 765
>sp|Q3UYK3|TBCD9_MOUSE TBC1 domain family member 9 OS=Mus musculus GN=Tbc1d9 PE=2 SV=2
Length = 1264
Score = 124 bits (312), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 127/247 (51%), Gaps = 20/247 (8%)
Query: 24 IWMIISEADTLKKVTHQTRHYGTGGYYAFMLNNKILDPDIG-ETIRTDLPRTFPENIFFR 82
+W+++S A +K TH GYY ++ + ++ E I DL R+ PE+ F+
Sbjct: 524 LWLLLSGAIN-EKATHP-------GYYEGLVEKSMGKYNLATEEIERDLHRSLPEHPAFQ 575
Query: 83 NSLEHQQQLSRILKVFALDEKNIGYCQGLNYIAALILLVTKHEENTYWIFRSVINKYFSD 142
N + L R+L +A NIGYCQ +N + +++LL K EE +W+ ++ + D
Sbjct: 576 NEM-GIAALRRVLTAYAFRNPNIGYCQAMNIVTSVLLLYAKEEE-AFWLLVALCERMLPD 633
Query: 143 YYTKTLTGVVRDIDVLSELVKIKMPHLYDHISKVGVPWPVIATKWFICMFADVLPVETVL 202
YY + G + D V EL + +P LYD + +GV I+ WF+ +F V+P E+ +
Sbjct: 634 YYNTRVVGALVDQGVFEELARDYVPQLYDCMQDLGV-ISTISLSWFLTLFLSVMPFESAV 692
Query: 203 RIWDCLFVEGPKILFRVSLTLIKLHERALLECED----FTTLVECFKSMVRS----PAVL 254
+ DC F EG K++F+++L ++ + LL C+D T L S+ P +
Sbjct: 693 VVVDCFFYEGIKVIFQLALAVLDANVDKLLNCKDDGEAMTVLGRYLDSVTNKDSTLPPIP 752
Query: 255 NCHSFMS 261
+ HS +S
Sbjct: 753 HLHSLLS 759
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Query: 249 RSPAVLNCHSFMSGLNYIAALILLVTKHEENTYWIFRSVINKYFSDYYTKTLTGVVRDID 308
R+P + C + +N + +++LL K EE +W+ ++ + DYY + G + D
Sbjct: 593 RNPNIGYCQA----MNIVTSVLLLYAKEEE-AFWLLVALCERMLPDYYNTRVVGALVDQG 647
Query: 309 VLSELVNDYYTKTLTGVVRDIDVLS 333
V EL DY + L ++D+ V+S
Sbjct: 648 VFEELARDYVPQ-LYDCMQDLGVIS 671
>sp|Q8C9V1|TB10C_MOUSE Carabin OS=Mus musculus GN=Tbc1d10c PE=2 SV=1
Length = 444
Score = 124 bits (311), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 75/227 (33%), Positives = 108/227 (47%), Gaps = 11/227 (4%)
Query: 1 MYKKKKKKKEEAEIKHTSTFDFSIWMIISEADTLKKVTHQTRHYGTGGYYAFMLNNKILD 60
M ++ KK K + S W ++ A +K T L D
Sbjct: 76 MSRRYKKVKIQCRKGIPSALRARCWPLLCGARMCQKNNPGTYQE---------LAAAPGD 126
Query: 61 PDIGETIRTDLPRTFPENIFFRNSLEHQQQ-LSRILKVFALDEKNIGYCQGLNYIAALIL 119
P ETI DL R FP + F + H QQ L ++LK + L GYCQ +AA++L
Sbjct: 127 PQWMETIGRDLHRQFPLHEMFVSPQGHGQQGLLQVLKAYTLYRPEQGYCQAQGPVAAVLL 186
Query: 120 LVTKHEENTYWIFRSVINKYFSDYYTKTLTGVVRDIDVLSELVKIKMPHLYDHISKVGVP 179
+ EE +W + Y YY + V D +V L++ ++P +Y H+ +VGV
Sbjct: 187 MHLPPEE-AFWCLVQICEVYLPGYYGPHMEAVQLDAEVFMALLRRQLPRVYKHLQQVGVG 245
Query: 180 WPVIATKWFICMFADVLPVETVLRIWDCLFVEGPKILFRVSLTLIKL 226
+ +WF+C+F LP TVLRIWD EG K+LFRV LTL++L
Sbjct: 246 PLLYLPEWFLCLFTRSLPFPTVLRIWDAFLSEGAKVLFRVGLTLMRL 292
>sp|Q6ZT07|TBCD9_HUMAN TBC1 domain family member 9 OS=Homo sapiens GN=TBC1D9 PE=2 SV=2
Length = 1266
Score = 124 bits (310), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 127/247 (51%), Gaps = 20/247 (8%)
Query: 24 IWMIISEADTLKKVTHQTRHYGTGGYYAFMLNNKILDPDIG-ETIRTDLPRTFPENIFFR 82
+W+++S A +K TH GYY ++ + ++ E I DL R+ PE+ F+
Sbjct: 524 LWLLLSGAIN-EKATHP-------GYYEDLVEKSMGKYNLATEEIERDLHRSLPEHPAFQ 575
Query: 83 NSLEHQQQLSRILKVFALDEKNIGYCQGLNYIAALILLVTKHEENTYWIFRSVINKYFSD 142
N + L R+L +A NIGYCQ +N + +++LL K EE +W+ ++ + D
Sbjct: 576 NEM-GIAALRRVLTAYAFRNPNIGYCQAMNIVTSVLLLYAKEEE-AFWLLVALCERMLPD 633
Query: 143 YYTKTLTGVVRDIDVLSELVKIKMPHLYDHISKVGVPWPVIATKWFICMFADVLPVETVL 202
YY + G + D V EL + +P LYD + +GV I+ WF+ +F V+P E+ +
Sbjct: 634 YYNTRVVGALVDQGVFEELARDYVPQLYDCMQDLGV-ISTISLSWFLTLFLSVMPFESAV 692
Query: 203 RIWDCLFVEGPKILFRVSLTLIKLHERALLECED----FTTLVECFKSMVRS----PAVL 254
+ DC F EG K++F+++L ++ + LL C+D T L S+ P +
Sbjct: 693 VVVDCFFYEGIKVIFQLALAVLDANVDKLLNCKDDGEAMTVLGRYLDSVTNKDSTLPPIP 752
Query: 255 NCHSFMS 261
+ HS +S
Sbjct: 753 HLHSLLS 759
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Query: 249 RSPAVLNCHSFMSGLNYIAALILLVTKHEENTYWIFRSVINKYFSDYYTKTLTGVVRDID 308
R+P + C + +N + +++LL K EE +W+ ++ + DYY + G + D
Sbjct: 593 RNPNIGYCQA----MNIVTSVLLLYAKEEE-AFWLLVALCERMLPDYYNTRVVGALVDQG 647
Query: 309 VLSELVNDYYTKTLTGVVRDIDVLS 333
V EL DY + L ++D+ V+S
Sbjct: 648 VFEELARDYVPQ-LYDCMQDLGVIS 671
>sp|A6QP29|TBD2A_BOVIN TBC1 domain family member 2A OS=Bos taurus GN=TBC1D2 PE=2 SV=1
Length = 925
Score = 123 bits (309), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 100/194 (51%), Gaps = 2/194 (1%)
Query: 45 GTGGYYAFMLNNKILDPDIGETIRTDLPRTFPENIFFR-NSLEHQQQLSRILKVFALDEK 103
G Y A + + I DL RTFP N F + +L R+L F+
Sbjct: 645 APGCYQALLSRGQACKHSAARQIELDLNRTFPNNKHFTCPTSSFPDKLRRVLLAFSWQNP 704
Query: 104 NIGYCQGLNYIAALILLVTKHEENTYWIFRSVINKYF-SDYYTKTLTGVVRDIDVLSELV 162
IGYCQGLN +AA+ LLV EE+ +W +++ +DYY+KTL D VL +L+
Sbjct: 705 TIGYCQGLNRLAAIALLVLDEEESAFWCLVAIVETIMPADYYSKTLLASQVDQRVLQDLL 764
Query: 163 KIKMPHLYDHISKVGVPWPVIATKWFICMFADVLPVETVLRIWDCLFVEGPKILFRVSLT 222
K+P L H+ + V I WF+ +FAD L +L++WD EG K++FR +L
Sbjct: 765 LEKLPRLMAHLGQRHVDLSFITFNWFLVVFADSLISNILLQVWDAFLYEGIKVVFRYALA 824
Query: 223 LIKLHERALLECED 236
+ K +E ALL +D
Sbjct: 825 IFKYNEEALLRLQD 838
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 258 SFMSGLNYIAALILLVTKHEENTYWIFRSVINKYF-SDYYTKTLTGVVRDIDVLSELV 314
+ GLN +AA+ LLV EE+ +W +++ +DYY+KTL D VL +L+
Sbjct: 707 GYCQGLNRLAAIALLVLDEEESAFWCLVAIVETIMPADYYSKTLLASQVDQRVLQDLL 764
>sp|Q9BYX2|TBD2A_HUMAN TBC1 domain family member 2A OS=Homo sapiens GN=TBC1D2 PE=1 SV=3
Length = 928
Score = 121 bits (304), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 106/198 (53%), Gaps = 3/198 (1%)
Query: 42 RHYGTGGYYAFMLN-NKILDPDIGETIRTDLPRTFPENIFFR-NSLEHQQQLSRILKVFA 99
+H T G Y +L+ + + I DL RTFP N F + +L R+L F+
Sbjct: 644 QHLHTPGCYQELLSRGQAREHPAARQIELDLNRTFPNNKHFTCPTSSFPDKLRRVLLAFS 703
Query: 100 LDEKNIGYCQGLNYIAALILLVTKHEENTYWIFRSVINKYF-SDYYTKTLTGVVRDIDVL 158
IGYCQGLN +AA+ LLV + EE+ +W +++ +DYY TLT D VL
Sbjct: 704 WQNPTIGYCQGLNRLAAIALLVLEEEESAFWCLVAIVETIMPADYYCNTLTASQVDQRVL 763
Query: 159 SELVKIKMPHLYDHISKVGVPWPVIATKWFICMFADVLPVETVLRIWDCLFVEGPKILFR 218
+L+ K+P L H+ + V ++ WF+ +FAD L +LR+WD EG K++FR
Sbjct: 764 QDLLSEKLPRLMAHLGQHHVDLSLVTFNWFLVVFADSLISNILLRVWDAFLYEGTKVVFR 823
Query: 219 VSLTLIKLHERALLECED 236
+L + K +E+ +L ++
Sbjct: 824 YALAIFKYNEKEILRLQN 841
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 258 SFMSGLNYIAALILLVTKHEENTYWIFRSVINKYF-SDYYTKTLTGVVRDIDVLSELVND 316
+ GLN +AA+ LLV + EE+ +W +++ +DYY TLT D VL +L+++
Sbjct: 710 GYCQGLNRLAAIALLVLEEEESAFWCLVAIVETIMPADYYCNTLTASQVDQRVLQDLLSE 769
Query: 317 YYTKTLT 323
+ +
Sbjct: 770 KLPRLMA 776
>sp|Q09830|YAD4_SCHPO TBC domain-containing protein C4G8.04 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC4G8.04 PE=1 SV=1
Length = 772
Score = 116 bits (290), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 110/207 (53%), Gaps = 4/207 (1%)
Query: 46 TGGYYAFMLN--NKILDPDIGETIRTDLPRTFPENIFFRNSLEHQQQLSRILKVFALDEK 103
+ GYY +L+ +++ + + I D+ RT +N+FF +L RIL ++
Sbjct: 525 SPGYYEELLSRTDEVESASVAQ-IDMDINRTMAKNVFFGGKGPGIPKLRRILVAYSRHNP 583
Query: 104 NIGYCQGLNYIAALILLVTKHEENTYWIFRSVI-NKYFSDYYTKTLTGVVRDIDVLSELV 162
+IGYCQG+N I A +LL+ EE+ +++ S+I N Y+T L D VL V
Sbjct: 584 HIGYCQGMNVIGAFLLLLYASEEDAFYMLMSIIENVLPPKYFTPDLMTSRADQLVLKSFV 643
Query: 163 KIKMPHLYDHISKVGVPWPVIATKWFICMFADVLPVETVLRIWDCLFVEGPKILFRVSLT 222
K +P +Y H+ +GV I+ WF+ ++ D LP RI+D LF +G LFRV+LT
Sbjct: 644 KESLPEIYSHLELLGVDLDAISFHWFLSVYTDTLPTNISFRIFDMLFCDGYVCLFRVALT 703
Query: 223 LIKLHERALLECEDFTTLVECFKSMVR 249
++K ++ +L C + + +V+
Sbjct: 704 ILKSLKQQILACNSSSAIYSFLSDLVQ 730
>sp|C8VDQ4|GYP2_EMENI Putative GTPase-activating protein AN11010 OS=Emericella nidulans
(strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 /
M139) GN=AN11010 PE=4 SV=1
Length = 1120
Score = 116 bits (290), Expect = 3e-25, Method: Composition-based stats.
Identities = 57/182 (31%), Positives = 101/182 (55%), Gaps = 2/182 (1%)
Query: 65 ETIRTDLPRTFPENIFFRNSLEHQQQLSRILKVFALDEKNIGYCQGLNYIAALILLVTKH 124
+ I DL R+ PE F+ S E +L R+L ++ IGYCQ +N + A LL+
Sbjct: 334 DEIEKDLNRSLPEYAGFQ-SEEGIGRLRRVLTAYSWTNAEIGYCQAMNIVVA-ALLIYMS 391
Query: 125 EENTYWIFRSVINKYFSDYYTKTLTGVVRDIDVLSELVKIKMPHLYDHISKVGVPWPVIA 184
E +++ + ++ YY+ T+ G + D V LV+ MP L+DH++K V V++
Sbjct: 392 EAQAFFLLSVLCDRLVPGYYSTTMYGTLLDQKVFESLVEKTMPILWDHLNKSDVQLSVVS 451
Query: 185 TKWFICMFADVLPVETVLRIWDCLFVEGPKILFRVSLTLIKLHERALLECEDFTTLVECF 244
WF+ ++ + +P+ R+ D F+EGPK+LF+V L +++++ LL+ +D + +
Sbjct: 452 LPWFLSLYINSMPLVFAFRVLDVFFLEGPKVLFQVGLAILRINGEELLDVQDDGSFISVL 511
Query: 245 KS 246
KS
Sbjct: 512 KS 513
>sp|P87234|GYP3_SCHPO GTPase-activating protein gyp3 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=gyp3 PE=1 SV=1
Length = 635
Score = 114 bits (286), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 117/259 (45%), Gaps = 44/259 (16%)
Query: 44 YGTGGYYAFMLNNKILD----------PDIGETIRTDLPRTFPENIFFRNSLEHQQ---- 89
Y +GGY N K+ + P + I DL RTFP+N+ FR+ +H +
Sbjct: 312 YYSGGYELLQRNPKLYETLWRCACIKKPSDSDLIERDLYRTFPDNVHFRHKSKHSRNSSD 371
Query: 90 ---------------QLSRILKVFALDEKNIGYCQGLNYIAALILLVTKHEENTYWIFRS 134
+L R+L FA GYCQ LN++A LL EE +W+
Sbjct: 372 ASEHSSEEPDVPMISKLRRVLMTFATYLPENGYCQSLNFLAGFFLLFMS-EEKAFWMLVI 430
Query: 135 VINKYFSDYYTKTLTGVVRDIDVLSELVKIKMPHLYDHISKV--GVPWPVIATK------ 186
KY + L G D VL V+ +P ++ IS G+P I K
Sbjct: 431 TCRKYLPKMHDANLEGANIDQSVLMASVRESLPAVWSRISLNFDGIPVNDIVAKLPPITL 490
Query: 187 ----WFICMFADVLPVETVLRIWDCLFVEGPKILFRVSLTLIKLHERALLECEDFTTLVE 242
WF+ F +LP ET LR+WDC F EG K+LF +L +++L E + + T + +
Sbjct: 491 VTAAWFMSAFVGILPTETALRVWDCFFYEGSKVLFMTALCILRLGEDDIKSKSEQTEVFQ 550
Query: 243 CFKSMVRSPAVLNCHSFMS 261
+ + +S +L+ ++F+S
Sbjct: 551 VIQDLPKS--LLDANAFLS 567
>sp|Q5SVR0|TBC9B_MOUSE TBC1 domain family member 9B OS=Mus musculus GN=Tbc1d9b PE=2 SV=1
Length = 1263
Score = 114 bits (285), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 125/247 (50%), Gaps = 20/247 (8%)
Query: 24 IWMIISEADTLKKVTHQTRHYGTGGYYAFMLNNKILDPDIG-ETIRTDLPRTFPENIFFR 82
+W++ S A + VTH GYYA ++ + + E I DL R+ PE+ F+
Sbjct: 518 LWLLFSGAWN-EMVTHP-------GYYAELVEKSLGKYSLATEEIERDLHRSMPEHPAFQ 569
Query: 83 NSLEHQQQLSRILKVFALDEKNIGYCQGLNYIAALILLVTKHEENTYWIFRSVINKYFSD 142
N L L R+L +A IGYCQ +N + +++LL EE +W+ ++ + D
Sbjct: 570 NEL-GIAALRRVLTAYAFRNPTIGYCQAMNIVTSVLLLYGSEEE-AFWLLVALCERMLPD 627
Query: 143 YYTKTLTGVVRDIDVLSELVKIKMPHLYDHISKVGVPWPVIATKWFICMFADVLPVETVL 202
YY + G + D + EL + +P L + + ++GV I+ WF+ +F V+P E+ +
Sbjct: 628 YYNTRVVGALVDQGIFEELTRDVLPRLSEKMQELGV-ISSISLSWFLTLFLSVMPFESAV 686
Query: 203 RIWDCLFVEGPKILFRVSLTLIKLHERALLECED----FTTLVECFKSMVR----SPAVL 254
I DC F EG K++ +V+L ++ + LL+C D T L ++V SP +
Sbjct: 687 VIVDCFFYEGIKVILQVALAVLDANVEQLLDCNDEGEAMTVLGRYLDNVVNKQSISPPIP 746
Query: 255 NCHSFMS 261
+ H+ ++
Sbjct: 747 HLHALLT 753
Score = 38.1 bits (87), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 20/87 (22%), Positives = 44/87 (50%), Gaps = 6/87 (6%)
Query: 249 RSPAVLNCHSFMSGLNYIAALILLVTKHEENTYWIFRSVINKYFSDYYTKTLTGVVRDID 308
R+P + C + +N + +++LL EE +W+ ++ + DYY + G + D
Sbjct: 587 RNPTIGYCQA----MNIVTSVLLLYGSEEE-AFWLLVALCERMLPDYYNTRVVGALVDQG 641
Query: 309 VLSELVNDYYTKTLTGVVRDIDVLSEL 335
+ EL D + L+ ++++ V+S +
Sbjct: 642 IFEELTRDVLPR-LSEKMQELGVISSI 667
>sp|P58802|TB10A_MOUSE TBC1 domain family member 10A OS=Mus musculus GN=Tbc1d10a PE=1 SV=1
Length = 500
Score = 113 bits (283), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 100/200 (50%), Gaps = 7/200 (3%)
Query: 60 DPDIGETIRTDLPRTFP-ENIFFRNSLEHQQQLSRILKVFALDEKNIGYCQGLNYIAALI 118
DP + I DL R FP +F QQ L R+LK + L GYCQ IAA +
Sbjct: 147 DPKWLDVIERDLHRQFPFHEMFVSRGGHGQQDLFRVLKAYTLYRPEEGYCQAQAPIAA-V 205
Query: 119 LLVTKHEENTYWIFRSVINKYFSDYYTKTLTGVVRDIDVLSELVKIKMPHLYDHISKVGV 178
LL+ E +W V KY YY++ L + D ++L L++ P + H+S+ +
Sbjct: 206 LLMHMPAEQAFWCLVQVCEKYLPGYYSEKLEAIQLDGEILFSLLQKVSPVAHKHLSRQKI 265
Query: 179 PWPVIATKWFICMFADVLPVETVLRIWDCLFVEGPKILFRVSLTLIK---LHERALLECE 235
+ T+WF+C FA LP +VLR+WD F EG KI+FRV L L+K L C+
Sbjct: 266 DPLLYMTEWFMCAFARTLPWSSVLRVWDMFFCEGVKIIFRVGLVLLKHALGSPEKLKACQ 325
Query: 236 DFTTLVECFKSMVRSPAVLN 255
+E +S+ SP ++
Sbjct: 326 GQYETIEQLRSL--SPKIMQ 343
>sp|Q12317|MSB4_YEAST GTPase-activating protein MSB4 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=MSB4 PE=1 SV=1
Length = 492
Score = 113 bits (282), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 98/200 (49%), Gaps = 30/200 (15%)
Query: 65 ETIRTDLPRTFPENIFF-RNSLEHQQ-----QLSRILKVFALDEKNIGYCQGLNYIAALI 118
E I DL RTFP+NI F + S ++ + L R+L F++ +K IGYCQ +N++ L+
Sbjct: 192 EAIERDLYRTFPDNIHFHKESFQNGEPAIIRSLRRVLMAFSVYDKTIGYCQSMNFLVGLL 251
Query: 119 LLVTKHEENTYWIFRSVINKYFSDYYTKTLTGVVRDIDVLSELVKIKMPHLYDHI----- 173
LL + EE +W+ + KY Y L G D VL +K +P ++ HI
Sbjct: 252 LLFME-EEKAFWMLVIITGKYLPGVYESDLEGANVDQGVLVLCIKEYLPEIWSHIESSYM 310
Query: 174 ----SKVGVPWPVIA--------------TKWFICMFADVLPVETVLRIWDCLFVEGPKI 215
S + P WF+ F V+P+ET LRIWDCLF E
Sbjct: 311 NGNGSTDQISGPASGEEYLCRLPTLTLCTASWFMSCFVGVVPIETTLRIWDCLFYEESHF 370
Query: 216 LFRVSLTLIKLHERALLECE 235
LF+V+L ++KL E LE +
Sbjct: 371 LFKVALGILKLSESEFLESK 390
>sp|A3KGB4|TBC8B_MOUSE TBC1 domain family member 8B OS=Mus musculus GN=Tbc1d8b PE=2 SV=1
Length = 1114
Score = 112 bits (281), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 104/190 (54%), Gaps = 4/190 (2%)
Query: 48 GYYAFMLNNKILDPDIG-ETIRTDLPRTFPENIFFRNSLEHQQQLSRILKVFALDEKNIG 106
GYYA ++ + ++ E I DL R+ PE+ F++ L R+L +A IG
Sbjct: 511 GYYAEVVEQSLGTSNLATEEIERDLRRSLPEHPAFQSDT-GISALRRVLTAYAYRNPKIG 569
Query: 107 YCQGLNYIAALILLVTKHEENTYWIFRSVINKYFSDYYTKTLTGVVRDIDVLSELVKIKM 166
YCQ +N + +++LL K EE +W+ +V + DY+ + + G + D V EL++ +
Sbjct: 570 YCQAMNILTSVLLLYAKEEE-AFWLLVAVCERMLPDYFNRRIIGALVDQAVFEELIRDHL 628
Query: 167 PHLYDHISKVGVPWPVIATKWFICMFADVLPVETVLRIWDCLFVEGPKILFRVSLTLIKL 226
P L DH++ + + ++ WF+ +F VLP+E+ + + DC F +G K + ++ L ++
Sbjct: 629 PQLTDHMTDMTF-FSSVSLSWFLTLFISVLPIESAVNVVDCFFYDGIKAILQLGLAILDY 687
Query: 227 HERALLECED 236
+ LL C+D
Sbjct: 688 NLDKLLTCKD 697
Score = 41.2 bits (95), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Query: 249 RSPAVLNCHSFMSGLNYIAALILLVTKHEENTYWIFRSVINKYFSDYYTKTLTGVVRDID 308
R+P + C + +N + +++LL K EE +W+ +V + DY+ + + G + D
Sbjct: 564 RNPKIGYCQA----MNILTSVLLLYAKEEE-AFWLLVAVCERMLPDYFNRRIIGALVDQA 618
Query: 309 VLSELVNDYYTKTLTGVVRDIDVLS 333
V EL+ D+ + LT + D+ S
Sbjct: 619 VFEELIRDHLPQ-LTDHMTDMTFFS 642
>sp|O94711|GYP2_SCHPO GTPase-activating protein gyp2 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=gyp2 PE=3 SV=1
Length = 720
Score = 112 bits (280), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 111/204 (54%), Gaps = 9/204 (4%)
Query: 46 TGGYYA----FMLNNKILDPDIGETIRTDLPRTFPENIFFRNSLEHQQQLSRILKVFALD 101
+ G+YA ++NN+ + E I DL R+ P+ ++ S L RIL ++
Sbjct: 239 SKGFYAKNIDSVINNRC---EYSEEIEKDLTRSLPDYPAYQ-SPTGINTLRRILLFYSET 294
Query: 102 EKNIGYCQGLNYIAALILLVTKHEENTYWIFRSVINKYFSDYYTKTLTGVVRDIDVLSEL 161
K +GYCQ +N + A LLV EE Y++F + Y YY K + G++ D+ V +
Sbjct: 295 NKEVGYCQAMNIVLA-ALLVYCTEEQAYFLFSQLCEFYIPGYYAKIIHGLLLDLTVFEYV 353
Query: 162 VKIKMPHLYDHISKVGVPWPVIATKWFICMFADVLPVETVLRIWDCLFVEGPKILFRVSL 221
++ +PHLY I ++ + +I WF +F ++ RI DCLFV GP++LF+V+L
Sbjct: 354 LEHTLPHLYQKIIELDMDLKLITINWFFSLFIKDFRLDYAFRILDCLFVNGPRVLFQVAL 413
Query: 222 TLIKLHERALLECEDFTTLVECFK 245
L K++ + +L D +++++ F+
Sbjct: 414 ALFKVNAQGILNATDDSSVMKVFR 437
>sp|O43048|YH51_SCHPO TBC domain-containing protein C215.01 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPBC215.01 PE=3 SV=4
Length = 834
Score = 111 bits (278), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 99/186 (53%), Gaps = 2/186 (1%)
Query: 65 ETIRTDLPRTFPENIFFRNSLEHQQQLSRILKVFALDEKNIGYCQGLNYIAALILLVTKH 124
E I DL R+ PE ++N E L +L F+ + +GYCQ +N +AA LL+
Sbjct: 263 EEIEKDLGRSLPEYPAYQNE-EGINALRNVLVAFSWKNQEVGYCQAMNIVAA-ALLIHCT 320
Query: 125 EENTYWIFRSVINKYFSDYYTKTLTGVVRDIDVLSELVKIKMPHLYDHISKVGVPWPVIA 184
EE T+++ + Y YY+KT+ G + D V LV+ MP+L+ H + +I+
Sbjct: 321 EEQTFFLMHKICEDYIPGYYSKTMYGTLIDQQVYESLVQRSMPNLHAHFVSKDIQLSIIS 380
Query: 185 TKWFICMFADVLPVETVLRIWDCLFVEGPKILFRVSLTLIKLHERALLECEDFTTLVECF 244
WF+ +F +P+ R+ D F+EGP++LF++ + ++ +E +++ + T L+
Sbjct: 381 LPWFLSLFLCTMPLPYAFRLLDFFFLEGPRVLFQIGMAILYDNEAEIMKATEDTMLISIL 440
Query: 245 KSMVRS 250
K+ S
Sbjct: 441 KNYFSS 446
>sp|Q66K14|TBC9B_HUMAN TBC1 domain family member 9B OS=Homo sapiens GN=TBC1D9B PE=1 SV=3
Length = 1250
Score = 111 bits (277), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 109/214 (50%), Gaps = 12/214 (5%)
Query: 24 IWMIISEADTLKKVTHQTRHYGTGGYYAFMLNNKILDPDIG-ETIRTDLPRTFPENIFFR 82
+W++ S A + VTH GYYA ++ + E I DL R+ PE+ F+
Sbjct: 517 LWLLFSGAWN-EMVTHP-------GYYAELVEKSTGKYSLATEEIERDLHRSMPEHPAFQ 568
Query: 83 NSLEHQQQLSRILKVFALDEKNIGYCQGLNYIAALILLVTKHEENTYWIFRSVINKYFSD 142
N L L R+L +A IGYCQ +N + +++LL EE +W+ ++ + D
Sbjct: 569 NEL-GIAALRRVLTAYAFRNPTIGYCQAMNIVTSVLLLYGSEEE-AFWLLVALCERMLPD 626
Query: 143 YYTKTLTGVVRDIDVLSELVKIKMPHLYDHISKVGVPWPVIATKWFICMFADVLPVETVL 202
YY + G + D + EL + +P L + + +GV I+ WF+ +F V+P E+ +
Sbjct: 627 YYNTRVVGALVDQGIFEELTRDFLPQLSEKMQDLGV-ISSISLSWFLTLFLSVMPFESAV 685
Query: 203 RIWDCLFVEGPKILFRVSLTLIKLHERALLECED 236
I DC F EG K++ +V+L ++ + LL C D
Sbjct: 686 VIVDCFFYEGIKVILQVALAVLDANMEQLLGCSD 719
Score = 41.6 bits (96), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 249 RSPAVLNCHSFMSGLNYIAALILLVTKHEENTYWIFRSVINKYFSDYYTKTLTGVVRDID 308
R+P + C + +N + +++LL EE +W+ ++ + DYY + G + D
Sbjct: 586 RNPTIGYCQA----MNIVTSVLLLYGSEEE-AFWLLVALCERMLPDYYNTRVVGALVDQG 640
Query: 309 VLSELVNDYYTKTLTGVVRDIDVLSEL 335
+ EL D+ + L+ ++D+ V+S +
Sbjct: 641 IFEELTRDFLPQ-LSEKMQDLGVISSI 666
>sp|D2H0G5|TBD2A_AILME TBC1 domain family member 2A OS=Ailuropoda melanoleuca GN=TBC1D2
PE=3 SV=1
Length = 923
Score = 111 bits (277), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 94/176 (53%), Gaps = 3/176 (1%)
Query: 42 RHYGTGGYYAFMLN-NKILDPDIGETIRTDLPRTFPENIFFR-NSLEHQQQLSRILKVFA 99
RH + G+Y +L+ ++ + I DL RTFP N F + +L R+L F+
Sbjct: 650 RHLQSPGHYQELLSRGQVREHPAARQIELDLNRTFPNNKHFTCPTSTFPDKLRRVLLAFS 709
Query: 100 LDEKNIGYCQGLNYIAALILLVTKHEENTYWIFRSVINKYF-SDYYTKTLTGVVRDIDVL 158
IGYCQGLN +AA+ LLV + EE+ +W +++ +DYY+KTLT D VL
Sbjct: 710 WQNPTIGYCQGLNRLAAIALLVLEEEESAFWCLVAIVETIMPADYYSKTLTSSQVDQRVL 769
Query: 159 SELVKIKMPHLYDHISKVGVPWPVIATKWFICMFADVLPVETVLRIWDCLFVEGPK 214
+L+ K+P L H+ + V + WF+ +FAD L +LR+WD EG K
Sbjct: 770 QDLLLEKLPRLMAHLGQYRVDLSFLTFNWFLVVFADSLISNILLRVWDAFLYEGTK 825
Score = 45.8 bits (107), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 258 SFMSGLNYIAALILLVTKHEENTYWIFRSVINKYF-SDYYTKTLTGVVRDIDVLSELV 314
+ GLN +AA+ LLV + EE+ +W +++ +DYY+KTLT D VL +L+
Sbjct: 716 GYCQGLNRLAAIALLVLEEEESAFWCLVAIVETIMPADYYSKTLTSSQVDQRVLQDLL 773
>sp|Q9BXI6|TB10A_HUMAN TBC1 domain family member 10A OS=Homo sapiens GN=TBC1D10A PE=1 SV=1
Length = 508
Score = 110 bits (274), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 88/167 (52%), Gaps = 2/167 (1%)
Query: 60 DPDIGETIRTDLPRTFP-ENIFFRNSLEHQQQLSRILKVFALDEKNIGYCQGLNYIAALI 118
DP + I DL R FP +F QQ L R+LK + L GYCQ IAA +
Sbjct: 147 DPKWLDVIERDLHRQFPFHEMFVSRGGHGQQDLFRVLKAYTLYRPEEGYCQAQAPIAA-V 205
Query: 119 LLVTKHEENTYWIFRSVINKYFSDYYTKTLTGVVRDIDVLSELVKIKMPHLYDHISKVGV 178
LL+ E +W + KY YY++ L + D ++L L++ P + H+S+ +
Sbjct: 206 LLMHMPAEQAFWCLVQICEKYLPGYYSEKLEAIQLDGEILFSLLQKVSPVAHKHLSRQKI 265
Query: 179 PWPVIATKWFICMFADVLPVETVLRIWDCLFVEGPKILFRVSLTLIK 225
+ T+WF+C F+ LP +VLR+WD F EG KI+FRV L L+K
Sbjct: 266 DPLLYMTEWFMCAFSRTLPWSSVLRVWDMFFCEGVKIIFRVGLVLLK 312
>sp|Q9Z1A9|TBCD8_MOUSE TBC1 domain family member 8 OS=Mus musculus GN=Tbc1d8 PE=2 SV=2
Length = 1134
Score = 109 bits (272), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 110/214 (51%), Gaps = 12/214 (5%)
Query: 24 IWMIISEADTLKKVTHQTRHYGTGGYYAFMLNNKILDPD-IGETIRTDLPRTFPENIFFR 82
+W++ S+A VT H GYY ++ + + E I DL R+ PE+ F+
Sbjct: 513 LWLLFSDA-----VTDLASH---PGYYGNLVEQSLGRCCLVTEEIERDLHRSLPEHPAFQ 564
Query: 83 NSLEHQQQLSRILKVFALDEKNIGYCQGLNYIAALILLVTKHEENTYWIFRSVINKYFSD 142
N L R+L +A IGYCQ +N + +++LL K EE +W+ +V + D
Sbjct: 565 NET-GIAALRRVLTAYAHRNPKIGYCQSMNILTSVLLLYAK-EEEAFWLLVAVCERMLPD 622
Query: 143 YYTKTLTGVVRDIDVLSELVKIKMPHLYDHISKVGVPWPVIATKWFICMFADVLPVETVL 202
Y+ + G D V EL+K ++P L +H+S + I+ WF+ +F ++P+E+ +
Sbjct: 623 YFNHRVIGAQVDQSVFEELIKEQLPELAEHMSDLSA-LASISLSWFLTLFLSIMPLESAV 681
Query: 203 RIWDCLFVEGPKILFRVSLTLIKLHERALLECED 236
+ DC F +G K +F++ L +++ + L +D
Sbjct: 682 HVVDCFFYDGIKAIFQLGLAVLEANAEELCSSKD 715
Score = 38.1 bits (87), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Query: 249 RSPAVLNCHSFMSGLNYIAALILLVTKHEENTYWIFRSVINKYFSDYYTKTLTGVVRDID 308
R+P + C S +N + +++LL K EE +W+ +V + DY+ + G D
Sbjct: 582 RNPKIGYCQS----MNILTSVLLLYAK-EEEAFWLLVAVCERMLPDYFNHRVIGAQVDQS 636
Query: 309 VLSELVNDYYTKTLTGVVRDIDVLSEL 335
V EL+ + + L + D+ L+ +
Sbjct: 637 VFEELIKEQLPE-LAEHMSDLSALASI 662
>sp|O95759|TBCD8_HUMAN TBC1 domain family member 8 OS=Homo sapiens GN=TBC1D8 PE=1 SV=3
Length = 1140
Score = 107 bits (268), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 110/214 (51%), Gaps = 12/214 (5%)
Query: 24 IWMIISEADTLKKVTHQTRHYGTGGYYAFMLNNKILDPD-IGETIRTDLPRTFPENIFFR 82
+W++ S+A VT H GYY ++ + + E I DL R+ PE+ F+
Sbjct: 514 LWLLFSDA-----VTDLASH---PGYYGNLVEESLGKCCLVTEEIERDLHRSLPEHPAFQ 565
Query: 83 NSLEHQQQLSRILKVFALDEKNIGYCQGLNYIAALILLVTKHEENTYWIFRSVINKYFSD 142
N L R+L +A IGYCQ +N + +++LL TK EE +W+ +V + D
Sbjct: 566 NET-GIAALRRVLTAYAHRNPKIGYCQSMNILTSVLLLYTK-EEEAFWLLVAVCERMLPD 623
Query: 143 YYTKTLTGVVRDIDVLSELVKIKMPHLYDHISKVGVPWPVIATKWFICMFADVLPVETVL 202
Y+ + G D V EL+K +P L +H++ + ++ WF+ +F ++P+E+ +
Sbjct: 624 YFNHRVIGAQVDQSVFEELIKGHLPELAEHMNDLSA-LASVSLSWFLTLFLSIMPLESAV 682
Query: 203 RIWDCLFVEGPKILFRVSLTLIKLHERALLECED 236
+ DC F +G K +F++ L +++ + L +D
Sbjct: 683 NVVDCFFYDGIKAIFQLGLAVLEANAEDLCSSKD 716
Score = 39.7 bits (91), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 249 RSPAVLNCHSFMSGLNYIAALILLVTKHEENTYWIFRSVINKYFSDYYTKTLTGVVRDID 308
R+P + C S +N + +++LL TK EE +W+ +V + DY+ + G D
Sbjct: 583 RNPKIGYCQS----MNILTSVLLLYTK-EEEAFWLLVAVCERMLPDYFNHRVIGAQVDQS 637
Query: 309 VLSELVNDYYTKTLTGVVRDIDVLS 333
V EL+ + + L + D+ L+
Sbjct: 638 VFEELIKGHLPE-LAEHMNDLSALA 661
>sp|Q4KMP7|TB10B_HUMAN TBC1 domain family member 10B OS=Homo sapiens GN=TBC1D10B PE=1 SV=3
Length = 808
Score = 107 bits (266), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 90/173 (52%), Gaps = 2/173 (1%)
Query: 54 LNNKILDPDIGETIRTDLPRTFP-ENIFFRNSLEHQQQLSRILKVFALDEKNIGYCQGLN 112
L DP + I DL R FP +F QQ L RILK + + + GYCQ
Sbjct: 390 LERAPGDPKWLDVIEKDLHRQFPFHEMFAARGGHGQQDLYRILKAYTIYRPDEGYCQAQA 449
Query: 113 YIAALILLVTKHEENTYWIFRSVINKYFSDYYTKTLTGVVRDIDVLSELVKIKMPHLYDH 172
+AA +LL+ E +W + +KY YY+ L + D ++ L++ P + H
Sbjct: 450 PVAA-VLLMHMPAEQAFWCLVQICDKYLPGYYSAGLEAIQLDGEIFFALLRRASPLAHRH 508
Query: 173 ISKVGVPWPVIATKWFICMFADVLPVETVLRIWDCLFVEGPKILFRVSLTLIK 225
+ + + + T+WF+C+FA LP +VLR+WD F EG KI+FRV+L L++
Sbjct: 509 LRRQRIDPVLYMTEWFMCIFARTLPWASVLRVWDMFFCEGVKIIFRVALVLLR 561
>sp|Q0IIM8|TBC8B_HUMAN TBC1 domain family member 8B OS=Homo sapiens GN=TBC1D8B PE=1 SV=2
Length = 1120
Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 95/172 (55%), Gaps = 3/172 (1%)
Query: 65 ETIRTDLPRTFPENIFFRNSLEHQQQLSRILKVFALDEKNIGYCQGLNYIAALILLVTKH 124
E I DL R+ PE+ F++ L R+L +A IGYCQ +N + +++LL K
Sbjct: 530 EEIERDLRRSLPEHPAFQSDT-GISALRRVLTAYAYRNPKIGYCQAMNILTSVLLLYAKE 588
Query: 125 EENTYWIFRSVINKYFSDYYTKTLTGVVRDIDVLSELVKIKMPHLYDHISKVGVPWPVIA 184
EE +W+ +V + DY+ + + G + D V EL++ +P L +H++ + + ++
Sbjct: 589 EE-AFWLLVAVCERMLPDYFNRRIIGALVDQAVFEELIRDHLPQLTEHMTDMTF-FSSVS 646
Query: 185 TKWFICMFADVLPVETVLRIWDCLFVEGPKILFRVSLTLIKLHERALLECED 236
WF+ +F VLP+E+ + + DC F +G K + ++ L ++ + LL C+D
Sbjct: 647 LSWFLTLFISVLPIESAVNVVDCFFYDGIKAILQLGLAILDYNLDKLLTCKD 698
Score = 41.2 bits (95), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Query: 249 RSPAVLNCHSFMSGLNYIAALILLVTKHEENTYWIFRSVINKYFSDYYTKTLTGVVRDID 308
R+P + C + +N + +++LL K EE +W+ +V + DY+ + + G + D
Sbjct: 565 RNPKIGYCQA----MNILTSVLLLYAKEEE-AFWLLVAVCERMLPDYFNRRIIGALVDQA 619
Query: 309 VLSELVNDYYTKTLTGVVRDIDVLS 333
V EL+ D+ + LT + D+ S
Sbjct: 620 VFEELIRDHLPQ-LTEHMTDMTFFS 643
>sp|Q8BYJ6|TBCD4_MOUSE TBC1 domain family member 4 OS=Mus musculus GN=Tbc1d4 PE=1 SV=2
Length = 1307
Score = 105 bits (263), Expect = 3e-22, Method: Composition-based stats.
Identities = 57/184 (30%), Positives = 104/184 (56%), Gaps = 3/184 (1%)
Query: 67 IRTDLPRTFPENIFFRNSL-EHQQQLSRILKVFALDEKNIGYCQGLNYIAALILLVTKHE 125
I DL RTFP + +F L Q L +LK ++L +K +GYCQG++++A +LL+ E
Sbjct: 975 ILVDLGRTFPTHPYFSVQLGAGQLSLFNLLKAYSLLDKEVGYCQGISFVAG-VLLLHMSE 1033
Query: 126 ENTYWIFRSVINKY-FSDYYTKTLTGVVRDIDVLSELVKIKMPHLYDHISKVGVPWPVIA 184
E + + + ++ F Y + + + LS L+ LY+H+ + + + A
Sbjct: 1034 EQAFEMLKFLMYDLGFRKQYRPDMMSLQIQMYQLSRLLHDYHRELYNHLEENEISPSLYA 1093
Query: 185 TKWFICMFADVLPVETVLRIWDCLFVEGPKILFRVSLTLIKLHERALLECEDFTTLVECF 244
WF+ +FA P+ V R++D +F++G +++F+V+L+L+ E ++ECE+F +VE
Sbjct: 1094 APWFLTLFASQFPLGFVARVFDIIFLQGTEVIFKVALSLLSSQEALIMECENFENIVEFL 1153
Query: 245 KSMV 248
KS +
Sbjct: 1154 KSTL 1157
>sp|Q8BHL3|TB10B_MOUSE TBC1 domain family member 10B OS=Mus musculus GN=Tbc1d10b PE=1 SV=2
Length = 798
Score = 105 bits (263), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 90/173 (52%), Gaps = 2/173 (1%)
Query: 54 LNNKILDPDIGETIRTDLPRTFP-ENIFFRNSLEHQQQLSRILKVFALDEKNIGYCQGLN 112
L DP + I DL R FP +F QQ L RILK + + + GYCQ
Sbjct: 376 LERAAGDPKWLDVIEKDLHRQFPFHEMFAARGGHGQQDLYRILKAYTIYRPDEGYCQAQA 435
Query: 113 YIAALILLVTKHEENTYWIFRSVINKYFSDYYTKTLTGVVRDIDVLSELVKIKMPHLYDH 172
+AA +LL+ E +W + +KY YY+ L + D ++ L++ P + H
Sbjct: 436 PVAA-VLLMHMPAEQAFWCLVQICDKYLPGYYSAGLEAIQLDGEIFFALLRRVSPLAHRH 494
Query: 173 ISKVGVPWPVIATKWFICMFADVLPVETVLRIWDCLFVEGPKILFRVSLTLIK 225
+ + + + T+WF+C+FA LP +VLR+WD F EG KI+FRV+L L++
Sbjct: 495 LRRQRIDPVLYMTEWFMCIFARTLPWASVLRVWDMFFCEGVKIIFRVALVLLR 547
>sp|Q8VCZ6|SGSM3_MOUSE Small G protein signaling modulator 3 OS=Mus musculus GN=Sgsm3 PE=1
SV=1
Length = 750
Score = 105 bits (261), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 121/243 (49%), Gaps = 15/243 (6%)
Query: 23 SIWMIISEADTLKKVTHQTRHYGTGGYYAFMLNNKILDPDIG-ETIRTDLPRTFPENIFF 81
+WM +S A KK + + Y ++ N D I + I DL RT P N F
Sbjct: 122 QLWMRLSGALQKKKNSELS--------YREIIKNSSNDETIAAKQIEKDLLRTMPSNACF 173
Query: 82 RN-SLEHQQQLSRILKVFALDEKNIGYCQGLNYIAALILLVTKHEENTYWIFRSVINKYF 140
N + +L R+L+ A IGYCQG +AA +LL + EE+ +W+ ++I
Sbjct: 174 ANVNSIGVPRLRRVLRALAWLYPEIGYCQGTGMVAACLLLFLE-EEDAFWMMCAIIEDLL 232
Query: 141 -SDYYTKTLTGVVRDIDVLSELVKIKMPHLYDHISKVGVPWPVIATKWFICMFADVLPVE 199
+ Y++ TL GV D VL L+ +P L + + + +I WF+ FA V+ +
Sbjct: 233 PASYFSTTLLGVQTDQRVLRHLIVQYLPRLDKLLQEHDIELSLITLHWFLTAFASVVHIR 292
Query: 200 TVLRIWDCLFVEGPKILFRVSLTLIKLHERALLECEDFTTLVECFKSMVRSPAVLNCHSF 259
+LRIWD F EG +LF+ +L +++L E L++ E+ ++ F ++ PA ++
Sbjct: 293 LLLRIWDLFFYEGSLVLFQTTLGMLRLKEEELIQSENSASI---FNTLSDIPAQMDDAEL 349
Query: 260 MSG 262
+ G
Sbjct: 350 LLG 352
Score = 35.0 bits (79), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 258 SFMSGLNYIAALILLVTKHEENTYWIFRSVINKYF-SDYYTKTLTGVVRDIDVLSELVND 316
+ G +AA +LL + EE+ +W+ ++I + Y++ TL GV D VL L+
Sbjct: 199 GYCQGTGMVAACLLLFLE-EEDAFWMMCAIIEDLLPASYFSTTLLGVQTDQRVLRHLIVQ 257
Query: 317 YYTK 320
Y +
Sbjct: 258 YLPR 261
>sp|Q6P6R7|SGSM3_RAT Small G protein signaling modulator 3 OS=Rattus norvegicus GN=Sgsm3
PE=1 SV=1
Length = 749
Score = 104 bits (260), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 121/243 (49%), Gaps = 15/243 (6%)
Query: 23 SIWMIISEADTLKKVTHQTRHYGTGGYYAFMLNNKILDPDIG-ETIRTDLPRTFPENIFF 81
+WM +S A KK + + Y ++ N D I + I DL RT P N F
Sbjct: 121 QLWMRLSGALQKKKNSELS--------YREIVKNSSNDETIAAKQIEKDLLRTMPSNACF 172
Query: 82 RN-SLEHQQQLSRILKVFALDEKNIGYCQGLNYIAALILLVTKHEENTYWIFRSVINKYF 140
N + +L R+L+ A IGYCQG +AA +LL + EE+ +W+ ++I
Sbjct: 173 ANVNSIGVPRLRRVLRALAWLYPEIGYCQGTGMVAACLLLFLE-EEDAFWMMCAIIEDLL 231
Query: 141 -SDYYTKTLTGVVRDIDVLSELVKIKMPHLYDHISKVGVPWPVIATKWFICMFADVLPVE 199
+ Y++ TL GV D VL L+ +P L + + + +I WF+ FA V+ +
Sbjct: 232 PASYFSTTLLGVQTDQRVLRHLIVQYLPRLDKLLQEHDIELSLITLHWFLTAFASVVHIR 291
Query: 200 TVLRIWDCLFVEGPKILFRVSLTLIKLHERALLECEDFTTLVECFKSMVRSPAVLNCHSF 259
+LRIWD F EG +LF+ +L +++L E L++ E+ ++ F ++ PA ++
Sbjct: 292 LLLRIWDLFFYEGSLVLFQTTLGMLRLKEEELIQSENSASI---FNTLSDIPAQMDDAEL 348
Query: 260 MSG 262
+ G
Sbjct: 349 LLG 351
Score = 35.0 bits (79), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 258 SFMSGLNYIAALILLVTKHEENTYWIFRSVINKYF-SDYYTKTLTGVVRDIDVLSELVND 316
+ G +AA +LL + EE+ +W+ ++I + Y++ TL GV D VL L+
Sbjct: 198 GYCQGTGMVAACLLLFLE-EEDAFWMMCAIIEDLLPASYFSTTLLGVQTDQRVLRHLIVQ 256
Query: 317 YYTK 320
Y +
Sbjct: 257 YLPR 260
>sp|P53258|GYP2_YEAST GTPase-activating protein GYP2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=MDR1 PE=1 SV=1
Length = 950
Score = 104 bits (260), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 105/200 (52%), Gaps = 13/200 (6%)
Query: 43 HYGTGGYYAFMLNNKILDPDIGET------IRTDLPRTFPENIFFRNSLEHQQQLSRILK 96
Y G Y +IL+ + G+T I DL R+ PE ++ E Q+L +L
Sbjct: 264 RYANSGEY-----ERILNENAGKTSQAIDEIEKDLKRSLPEYSAYQTE-EGIQRLRNVLT 317
Query: 97 VFALDEKNIGYCQGLNYIAALILLVTKHEENTYWIFRSVINKYFSDYYTKTLTGVVRDID 156
++ ++GYCQ +N + A L+ EE +W ++ + Y YY+KT+ G + D
Sbjct: 318 AYSWKNPDVGYCQAMNIVVAGFLIFMS-EEQAFWCLCNLCDIYVPGYYSKTMYGTLLDQR 376
Query: 157 VLSELVKIKMPHLYDHISKVGVPWPVIATKWFICMFADVLPVETVLRIWDCLFVEGPKIL 216
V V+ +MP L+++I + + V++ WF+ +F +P+E +RI D F+ G L
Sbjct: 377 VFESFVEDRMPVLWEYILQHDIQLSVVSLPWFLSLFFTSMPLEYAVRIMDIFFMNGSITL 436
Query: 217 FRVSLTLIKLHERALLECED 236
F+V+L ++K++ +L+ +D
Sbjct: 437 FQVALAVLKINADDILQADD 456
Score = 32.3 bits (72), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 5/68 (7%)
Query: 249 RSPAVLNCHSFMSGLNYIAALILLVTKHEENTYWIFRSVINKYFSDYYTKTLTGVVRDID 308
++P V C + +N + A L+ EE +W ++ + Y YY+KT+ G + D
Sbjct: 322 KNPDVGYCQA----MNIVVAGFLIFMS-EEQAFWCLCNLCDIYVPGYYSKTMYGTLLDQR 376
Query: 309 VLSELVND 316
V V D
Sbjct: 377 VFESFVED 384
>sp|Q96HU1|SGSM3_HUMAN Small G protein signaling modulator 3 OS=Homo sapiens GN=SGSM3 PE=1
SV=1
Length = 749
Score = 104 bits (260), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 122/247 (49%), Gaps = 16/247 (6%)
Query: 23 SIWMIISEADTLKKVTHQTRHYGTGGYYAFMLNNKILDPDIG-ETIRTDLPRTFPENIFF 81
+WM +S A K+ + + Y ++ N D I + I DL RT P N F
Sbjct: 122 QLWMRLSGALQKKRNSELS--------YREIVKNSSNDETIAAKQIEKDLLRTMPSNACF 173
Query: 82 RNSLE-HQQQLSRILKVFALDEKNIGYCQGLNYIAALILLVTKHEENTYWIFRSVINKYF 140
+ +L R+L+ A IGYCQG +AA +LL + EE+ +W+ ++I
Sbjct: 174 ASMGSIGVPRLRRVLRALAWLYPEIGYCQGTGMVAACLLLFLE-EEDAFWMMSAIIEDLL 232
Query: 141 -SDYYTKTLTGVVRDIDVLSELVKIKMPHLYDHISKVGVPWPVIATKWFICMFADVLPVE 199
+ Y++ TL GV D VL L+ +P L + + + +I WF+ FA V+ ++
Sbjct: 233 PASYFSTTLLGVQTDQRVLRHLIVQYLPRLDKLLQEHDIELSLITLHWFLTAFASVVDIK 292
Query: 200 TVLRIWDCLFVEGPKILFRVSLTLIKLHERALLECED----FTTLVECFKSMVRSPAVLN 255
+LRIWD F EG ++LF+++L ++ L E L++ E+ F TL + M + +L
Sbjct: 293 LLLRIWDLFFYEGSRVLFQLTLGMLHLKEEELIQSENSASIFNTLSDIPSQMEDAELLLG 352
Query: 256 CHSFMSG 262
++G
Sbjct: 353 VAMRLAG 359
Score = 35.8 bits (81), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 258 SFMSGLNYIAALILLVTKHEENTYWIFRSVINKYF-SDYYTKTLTGVVRDIDVLSELVND 316
+ G +AA +LL + EE+ +W+ ++I + Y++ TL GV D VL L+
Sbjct: 199 GYCQGTGMVAACLLLFLE-EEDAFWMMSAIIEDLLPASYFSTTLLGVQTDQRVLRHLIVQ 257
Query: 317 YYTK 320
Y +
Sbjct: 258 YLPR 261
>sp|Q28CB1|TBD2B_XENTR TBC1 domain family member 2B OS=Xenopus tropicalis GN=tbc1d2b PE=2
SV=1
Length = 943
Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 111/209 (53%), Gaps = 4/209 (1%)
Query: 45 GTGGYYAFMLNNKILDPD-IGETIRTDLPRTFPENIFFRN-SLEHQQQLSRILKVFALDE 102
GY+ +L N + + + I DL RT P N + + + E Q+L +L ++
Sbjct: 667 AAPGYFQSLLQNALEKQNPASKQIELDLMRTLPNNKHYTSPTSEGIQKLRNVLLAYSWRN 726
Query: 103 KNIGYCQGLNYIAALILLVTKHEENTYWIFRSVINKYFS-DYYTKTLTGVVRDIDVLSEL 161
+IGYCQG+N +AA+ LL +E+ +W +++ + DYYTKTL G D V +L
Sbjct: 727 PDIGYCQGINRLAAIALLYLD-QEDAFWCLVTIVEAFMPRDYYTKTLLGSQVDQRVFKDL 785
Query: 162 VKIKMPHLYDHISKVGVPWPVIATKWFICMFADVLPVETVLRIWDCLFVEGPKILFRVSL 221
+ K+P L H + V + +I WF+ +F D + + + RIWD L EG K++FR +L
Sbjct: 786 MNEKLPRLCAHFEQYKVDYTLITFNWFLVVFVDSVVSDILFRIWDSLLYEGSKVIFRFAL 845
Query: 222 TLIKLHERALLECEDFTTLVECFKSMVRS 250
L K E +L+ +D ++ + + R+
Sbjct: 846 GLFKYKEEEILKLQDSMSIFKYLRYFSRT 874
Score = 40.4 bits (93), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 6/69 (8%)
Query: 249 RSPAVLNCHSFMSGLNYIAALILLVTKHEENTYWIFRSVINKYFS-DYYTKTLTGVVRDI 307
R+P + C G+N +AA+ LL +E+ +W +++ + DYYTKTL G D
Sbjct: 725 RNPDIGYCQ----GINRLAAIALLYLD-QEDAFWCLVTIVEAFMPRDYYTKTLLGSQVDQ 779
Query: 308 DVLSELVND 316
V +L+N+
Sbjct: 780 RVFKDLMNE 788
>sp|Q9UPU7|TBD2B_HUMAN TBC1 domain family member 2B OS=Homo sapiens GN=TBC1D2B PE=1 SV=2
Length = 963
Score = 102 bits (255), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 107/197 (54%), Gaps = 5/197 (2%)
Query: 67 IRTDLPRTFPENIFFR-NSLEHQQQLSRILKVFALDEKNIGYCQGLNYIAALILLVTKHE 125
I DL RT P N + + E Q+L +L F+ +IGYCQGLN + A+ LL + +
Sbjct: 710 IELDLLRTLPNNKHYSCPTSEGIQKLRNVLLAFSWRNPDIGYCQGLNRLVAVALLYLE-Q 768
Query: 126 ENTYWIFRSVINKYFS-DYYTKTLTGVVRDIDVLSELVKIKMPHLYDHISKVGVPWPVIA 184
E+ +W +++ + DYYTKTL G D V +L+ K+P L+ H + V + +I
Sbjct: 769 EDAFWCLVTIVEVFMPRDYYTKTLLGSQVDQRVFRDLMSEKLPRLHGHFEQYKVDYTLIT 828
Query: 185 TKWFICMFADVLPVETVLRIWDCLFVEGPKILFRVSLTLIKLHERALLECEDFTTLVECF 244
WF+ +F D + + + +IWD EGPK++FR +L L K E +L+ +D ++ +
Sbjct: 829 FNWFLVVFVDSVVSDILFKIWDSFLYEGPKVIFRFALALFKYKEEEILKLQDSMSIFKYL 888
Query: 245 KSMVRSPAVLNCHSFMS 261
+ R+ +L+ +S
Sbjct: 889 RYFTRT--ILDARKLIS 903
Score = 36.6 bits (83), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 6/69 (8%)
Query: 249 RSPAVLNCHSFMSGLNYIAALILLVTKHEENTYWIFRSVINKYFS-DYYTKTLTGVVRDI 307
R+P + C GLN + A+ LL + +E+ +W +++ + DYYTKTL G D
Sbjct: 745 RNPDIGYCQ----GLNRLVAVALLYLE-QEDAFWCLVTIVEVFMPRDYYTKTLLGSQVDQ 799
Query: 308 DVLSELVND 316
V +L+++
Sbjct: 800 RVFRDLMSE 808
>sp|Q7T2D0|SGSM3_DANRE Small G protein signaling modulator 3 OS=Danio rerio GN=sgsm3 PE=2
SV=1
Length = 755
Score = 102 bits (255), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 121/247 (48%), Gaps = 16/247 (6%)
Query: 23 SIWMIISEADTLKKVTHQTRHYGTGGYYAFMLNNKILDPDIGETIRTDLPRTFPENIFFR 82
+WM +S A K+ + + Y + N+ D + I DL RT P N F
Sbjct: 123 QLWMRLSGALQKKRTSDIS-------YREIVKNSSNDDTTAAKQIEKDLLRTMPTNACF- 174
Query: 83 NSLEHQ--QQLSRILKVFALDEKNIGYCQGLNYIAALILLVTKHEENTYWIFRSVINKYF 140
N+L +L R+L+ A +IGYCQG + + +LL + EE+ W+ ++I
Sbjct: 175 NTLTSVGVPKLRRVLRGLAWLYPDIGYCQGTGMVVSCLLLFLE-EEDALWMMCALIEDLL 233
Query: 141 S-DYYTKTLTGVVRDIDVLSELVKIKMPHLYDHISKVGVPWPVIATKWFICMFADVLPVE 199
Y++ TL GV D VL +L+ +P L + + + +I WF+ FA V+ +
Sbjct: 234 PPSYFSSTLLGVQTDQRVLRQLIVQYLPRLDKLLQEHDIELSLITLHWFLTAFASVVDIR 293
Query: 200 TVLRIWDCLFVEGPKILFRVSLTLIKLHERALLECED----FTTLVECFKSMVRSPAVLN 255
+LRIWD LF EG +LF+V+L ++K+ E L+ E+ F TL + + AVL
Sbjct: 294 ILLRIWDLLFYEGSMVLFQVTLGMLKIKEDELVSSENSASIFNTLSDLPSQLEDGAAVLG 353
Query: 256 CHSFMSG 262
++G
Sbjct: 354 EAVRLAG 360
>sp|A6H8I2|SGSM3_XENLA Small G protein signaling modulator 3 homolog OS=Xenopus laevis
GN=sgsm3 PE=2 SV=1
Length = 753
Score = 102 bits (254), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 118/246 (47%), Gaps = 14/246 (5%)
Query: 23 SIWMIISEADTLKKVTHQTRHYGTGGYYAFMLNNKILDPDIGETIRTDLPRTFPENIFFR 82
+WM +S A K+ + T Y N+ D + I DL RT P N F
Sbjct: 123 QLWMRLSGALQKKQNSEMT-------YKDIGRNSSNDDTLAAKQIEKDLLRTMPSNACFS 175
Query: 83 NSLE-HQQQLSRILKVFALDEKNIGYCQGLNYIAALILLVTKHEENTYWIFRSVINKYFS 141
N +L R+L+ A +IGYCQG +AA +LL + EE+ +W+ +++
Sbjct: 176 NLQSVGVPRLRRVLRGLAWLFPDIGYCQGTGMVAACLLLFLE-EEDAFWMMATIVEDLVP 234
Query: 142 -DYYTKTLTGVVRDIDVLSELVKIKMPHLYDHISKVGVPWPVIATKWFICMFADVLPVET 200
Y+ TL GV D VL L+ +P L + + + +I WF+ FA V+ ++
Sbjct: 235 VSYFNTTLVGVQTDQRVLRHLIVQYLPRLDKLLQEHDIELSLITLHWFLTAFASVVHIKL 294
Query: 201 VLRIWDCLFVEGPKILFRVSLTLIKLHERALLECED----FTTLVECFKSMVRSPAVLNC 256
+LRIWD F +G +LF+ +L ++K+ E L++ E+ F TL + + + +L
Sbjct: 295 LLRIWDFFFYQGSLVLFQTTLGMLKMKEEELIQSENSASIFNTLSDIPSQIEEADVLLRE 354
Query: 257 HSFMSG 262
+SG
Sbjct: 355 AMLISG 360
Score = 32.7 bits (73), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 258 SFMSGLNYIAALILLVTKHEENTYWIFRSVINKYFS-DYYTKTLTGVVRDIDVLSELVND 316
+ G +AA +LL + EE+ +W+ +++ Y+ TL GV D VL L+
Sbjct: 200 GYCQGTGMVAACLLLFLE-EEDAFWMMATIVEDLVPVSYFNTTLVGVQTDQRVLRHLIVQ 258
Query: 317 YYTK 320
Y +
Sbjct: 259 YLPR 262
>sp|Q3U0J8|TBD2B_MOUSE TBC1 domain family member 2B OS=Mus musculus GN=Tbc1d2b PE=1 SV=2
Length = 965
Score = 102 bits (253), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 107/197 (54%), Gaps = 5/197 (2%)
Query: 67 IRTDLPRTFPENIFFRN-SLEHQQQLSRILKVFALDEKNIGYCQGLNYIAALILLVTKHE 125
I DL RT P N + + + E Q+L +L F+ +IGYCQGLN + A+ LL +
Sbjct: 712 IELDLLRTLPNNKHYSSPTSEGIQKLRSVLLAFSWRNPDIGYCQGLNRLVAVALLYL-DQ 770
Query: 126 ENTYWIFRSVINKYFS-DYYTKTLTGVVRDIDVLSELVKIKMPHLYDHISKVGVPWPVIA 184
E+ +W +++ + DYYTKTL G D V +L+ K+P L+ H + V + +I
Sbjct: 771 EDAFWCLVTIVEVFMPRDYYTKTLLGSQVDQRVFRDLLSEKLPRLHTHFEQYKVDYTLIT 830
Query: 185 TKWFICMFADVLPVETVLRIWDCLFVEGPKILFRVSLTLIKLHERALLECEDFTTLVECF 244
WF+ +F D + + + +IWD EGPK++FR +L L K E +L+ +D ++ +
Sbjct: 831 FNWFLVVFVDSVVSDILFKIWDSFLYEGPKVIFRFALALFKYKEEEILKLQDSMSIFKYL 890
Query: 245 KSMVRSPAVLNCHSFMS 261
+ R+ +L+ +S
Sbjct: 891 RYFTRT--ILDARKLIS 905
Score = 36.2 bits (82), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 6/69 (8%)
Query: 249 RSPAVLNCHSFMSGLNYIAALILLVTKHEENTYWIFRSVINKYFS-DYYTKTLTGVVRDI 307
R+P + C GLN + A+ LL +E+ +W +++ + DYYTKTL G D
Sbjct: 747 RNPDIGYCQ----GLNRLVAVALLYL-DQEDAFWCLVTIVEVFMPRDYYTKTLLGSQVDQ 801
Query: 308 DVLSELVND 316
V +L+++
Sbjct: 802 RVFRDLLSE 810
>sp|O60343|TBCD4_HUMAN TBC1 domain family member 4 OS=Homo sapiens GN=TBC1D4 PE=1 SV=2
Length = 1298
Score = 100 bits (249), Expect = 1e-20, Method: Composition-based stats.
Identities = 61/209 (29%), Positives = 108/209 (51%), Gaps = 15/209 (7%)
Query: 54 LNNKILDPDIG------------ETIRTDLPRTFPENIFFRNSL-EHQQQLSRILKVFAL 100
L NK PDI I DL RTFP + +F L Q L +LK ++L
Sbjct: 941 LPNKQQPPDISYKELLKQLTAQQHAILVDLGRTFPTHPYFSVQLGPGQLSLFNLLKAYSL 1000
Query: 101 DEKNIGYCQGLNYIAALILLVTKHEENTYWIFRSVINKY-FSDYYTKTLTGVVRDIDVLS 159
+K +GYCQG++++A +LL+ EE + + + ++ F Y + + + LS
Sbjct: 1001 LDKEVGYCQGISFVAG-VLLLHMSEEQAFEMLKFLMYDLGFRKQYRPDMMSLQIQMYQLS 1059
Query: 160 ELVKIKMPHLYDHISKVGVPWPVIATKWFICMFADVLPVETVLRIWDCLFVEGPKILFRV 219
L+ LY+H+ + + + A WF+ +FA + V R++D +F++G +++F+V
Sbjct: 1060 RLLHDYHRDLYNHLEENEISPSLYAAPWFLTLFASQFSLGFVARVFDIIFLQGTEVIFKV 1119
Query: 220 SLTLIKLHERALLECEDFTTLVECFKSMV 248
+L+L+ E ++ECE F +VE K+ +
Sbjct: 1120 ALSLLSSQETLIMECESFENIVEFLKNTL 1148
>sp|B0R0W9|TBC8B_DANRE TBC1 domain family member 8B OS=Danio rerio GN=tbc1d8b PE=4 SV=1
Length = 1108
Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 110/219 (50%), Gaps = 12/219 (5%)
Query: 19 TFDFSIWMIISEADTLKKVTHQTRHYGTGGYYAFMLNNKILDPDIG-ETIRTDLPRTFPE 77
T +WM+ S A ++H GYY +L + + + + I DL R+ PE
Sbjct: 473 TLRGELWMLFSGA-VHDMISHP-------GYYGRLLEDCMGSSSLACDEIERDLHRSLPE 524
Query: 78 NIFFRNSLEHQQQLSRILKVFALDEKNIGYCQGLNYIAALILLVTKHEENTYWIFRSVIN 137
+ F++ L R+L +A IGYCQ +N + +++LL K EE +W+ +V
Sbjct: 525 HPAFQSDT-GISALRRVLTAYAHRNPKIGYCQAMNILTSVLLLYAKEEE-AFWLLVAVCE 582
Query: 138 KYFSDYYTKTLTGVVRDIDVLSELVKIKMPHLYDHISKVGVPWPVIATKWFICMFADVLP 197
+ DY+ + + G + D V EL++ + L +H++ + ++ WF+ +F VLP
Sbjct: 583 RMLPDYFNRRIIGALVDQAVFEELIREHLTQLTEHMTDLSFFS-SVSLSWFLTLFISVLP 641
Query: 198 VETVLRIWDCLFVEGPKILFRVSLTLIKLHERALLECED 236
+E+ + + DC F +G K + ++ L ++ + LL C D
Sbjct: 642 IESAVNVVDCFFYDGIKAILQLGLAVLDYNMDNLLCCND 680
Score = 40.8 bits (94), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Query: 249 RSPAVLNCHSFMSGLNYIAALILLVTKHEENTYWIFRSVINKYFSDYYTKTLTGVVRDID 308
R+P + C + +N + +++LL K EE +W+ +V + DY+ + + G + D
Sbjct: 547 RNPKIGYCQA----MNILTSVLLLYAKEEE-AFWLLVAVCERMLPDYFNRRIIGALVDQA 601
Query: 309 VLSELVNDYYTK 320
V EL+ ++ T+
Sbjct: 602 VFEELIREHLTQ 613
>sp|Q28C33|TBC30_XENTR TBC1 domain family member 30 OS=Xenopus tropicalis GN=tbc1d30 PE=2
SV=1
Length = 907
Score = 99.4 bits (246), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 101/191 (52%), Gaps = 18/191 (9%)
Query: 60 DPDIGETIRTDLPRTFPENIFFRNSLEHQQQLSRILKVFALDEKNIGYCQGLNYIAALIL 119
D +G I DL RT + + + + + L R+L +A K IGYCQG N +AALIL
Sbjct: 284 DDSMGIQIVKDLHRTGCSSYCGQEAEQDRVVLKRVLLAYARWNKTIGYCQGFNILAALIL 343
Query: 120 LVTK-HEENTYWIFRSVINKYFSD-YYTKTLTGVVRDIDVLSELVKIKMPHLYDHI---- 173
V + +E + + +I+K D Y+ L + D+ V +LV++K+P L H+
Sbjct: 344 EVMEGNEGDALKVMIYLIDKVLPDSYFANNLRALSVDMAVFRDLVRMKLPELSQHLDVLQ 403
Query: 174 ------SKVGVPWP---VIATKWFICMFADVLPVETVLRIWDCLFVEGPKILFRVSLTL- 223
S G P V +WF+ +FA LP TVL+IWD +F EG +IL RVSL +
Sbjct: 404 RTANKESGGGYEPPLTNVFTMQWFLTLFATCLPNHTVLKIWDSVFFEGSEILLRVSLAIW 463
Query: 224 IKLHERALLEC 234
KL E+ +EC
Sbjct: 464 AKLGEQ--IEC 472
>sp|Q86TI0|TBCD1_HUMAN TBC1 domain family member 1 OS=Homo sapiens GN=TBC1D1 PE=1 SV=2
Length = 1168
Score = 99.0 bits (245), Expect = 4e-20, Method: Composition-based stats.
Identities = 56/183 (30%), Positives = 101/183 (55%), Gaps = 1/183 (0%)
Query: 67 IRTDLPRTFPENIFFRNSL-EHQQQLSRILKVFALDEKNIGYCQGLNYIAALILLVTKHE 125
I DL RTFP + +F L Q L ILK ++L ++ +GYCQGL+++A ++LL E
Sbjct: 848 ILIDLGRTFPTHPYFSAQLGAGQLSLYNILKAYSLLDQEVGYCQGLSFVAGILLLHMSEE 907
Query: 126 ENTYWIFRSVINKYFSDYYTKTLTGVVRDIDVLSELVKIKMPHLYDHISKVGVPWPVIAT 185
E + + + Y + + + LS L+ LY+H+ + + + A
Sbjct: 908 EAFKMLKFLMFDMGLRKQYRPDMIILQIQMYQLSRLLHDYHRDLYNHLEEHEIGPSLYAA 967
Query: 186 KWFICMFADVLPVETVLRIWDCLFVEGPKILFRVSLTLIKLHERALLECEDFTTLVECFK 245
WF+ MFA P+ V R++D +F++G +++F+V+L+L+ H+ +L+ E+ T+V+ K
Sbjct: 968 PWFLTMFASQFPLGFVARVFDMIFLQGTEVIFKVALSLLGSHKPLILQHENLETIVDFIK 1027
Query: 246 SMV 248
S +
Sbjct: 1028 STL 1030
>sp|Q2KI13|SGSM3_BOVIN Small G protein signaling modulator 3 OS=Bos taurus GN=SGSM3 PE=2
SV=1
Length = 747
Score = 99.0 bits (245), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 118/236 (50%), Gaps = 15/236 (6%)
Query: 23 SIWMIISEADTLKKVTHQTRHYGTGGYYAFMLNNKILDPDIG-ETIRTDLPRTFPENIFF 81
+WM +S A K+ + + Y ++ N D I + I DL RT P N F
Sbjct: 119 QLWMRLSGALQKKRNSELS--------YREIVKNSSNDETIAAKQIEKDLLRTMPSNACF 170
Query: 82 RN-SLEHQQQLSRILKVFALDEKNIGYCQGLNYIAALILLVTKHEENTYWIFRSVINKYF 140
+ S +L R+L+ A IGYCQG +AA +LL + E++ +W+ ++I
Sbjct: 171 AHVSGVGVPRLRRVLRALAWLYPEIGYCQGTGMVAACLLLFLE-EDDAFWMMCAIIEDLL 229
Query: 141 -SDYYTKTLTGVVRDIDVLSELVKIKMPHLYDHISKVGVPWPVIATKWFICMFADVLPVE 199
+ Y++ TL GV D VL L+ +P L + + + +I WF+ FA V+ +
Sbjct: 230 PASYFSTTLLGVQTDQRVLRHLIVQYLPRLDRLLQEHDIELSLITLHWFLTAFASVVHIR 289
Query: 200 TVLRIWDCLFVEGPKILFRVSLTLIKLHERALLECEDFTTLVECFKSMVRSPAVLN 255
+LR+WD F EG +LF+ +L +++L E L++ E+ ++ F ++ P+ L
Sbjct: 290 LLLRLWDLFFYEGSLVLFQATLGMLRLKEDELIQSENSASI---FNTLSDIPSQLE 342
Score = 33.5 bits (75), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 258 SFMSGLNYIAALILLVTKHEENTYWIFRSVINKYF-SDYYTKTLTGVVRDIDVLSELVND 316
+ G +AA +LL + E++ +W+ ++I + Y++ TL GV D VL L+
Sbjct: 196 GYCQGTGMVAACLLLFLE-EDDAFWMMCAIIEDLLPASYFSTTLLGVQTDQRVLRHLIVQ 254
Query: 317 YYTK 320
Y +
Sbjct: 255 YLPR 258
>sp|P48566|GYP3_YEAST GTPase-activating protein GYP3 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=MSB3 PE=1 SV=1
Length = 633
Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 102/211 (48%), Gaps = 40/211 (18%)
Query: 57 KILDPDIGETIRTDLPRTFPENIFFRNSLEHQQ------QLSRILKVFALDEKNIGYCQG 110
++ D DI I DL RTFP+NI F++SL +++ L R+L F+L IGYCQ
Sbjct: 269 QVQDLDI---IERDLNRTFPDNIHFQSSLHNKEGPPIIKSLRRVLVAFSLYNPKIGYCQS 325
Query: 111 LNYIAALILLVTKHEENTYWIFRSVINKYFSDYYTKTLTGVVRDIDVLSELVKIKMPHLY 170
+N++A L+LL EE +W+ + ++Y + L GV D VL VK +P ++
Sbjct: 326 MNFLAGLLLLFLD-EERAFWMLVIITSRYLPGVHNINLEGVNIDQGVLMLCVKEYIPEVW 384
Query: 171 -------DHISKVG-----------------------VPWPVIATKWFICMFADVLPVET 200
DH K P + WF+ F V+P+ET
Sbjct: 385 SYIKPSIDHHQKNNKTFSPSNKKVLFNMQKNEFLYRLPPITLCTASWFMSCFVGVVPIET 444
Query: 201 VLRIWDCLFVEGPKILFRVSLTLIKLHERAL 231
LRIWDCLF E LF+VSL ++KL E L
Sbjct: 445 TLRIWDCLFYEESHFLFKVSLAVLKLSEHDL 475
>sp|Q69ZT9|TBC30_MOUSE TBC1 domain family member 30 OS=Mus musculus GN=Tbc1d30 PE=2 SV=2
Length = 766
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/213 (34%), Positives = 113/213 (53%), Gaps = 23/213 (10%)
Query: 56 NKILDPD---IGETIRTDLPRTFPENIFFRNSLEHQQQLSRILKVFALDEKNIGYCQGLN 112
N+ +PD +G I DL RT + + + + + L R+L +A KN+GYCQG N
Sbjct: 121 NERSNPDDDSMGIQIVKDLHRTGCSSYCGQEAEQDRVVLKRVLLAYARWNKNVGYCQGFN 180
Query: 113 YIAALILLVTK-HEENTYWIFRSVINKYFSD-YYTKTLTGVVRDIDVLSELVKIKMPHLY 170
+AALIL V + +E + I +I+K + Y+ L + D+ V +L+++K+P L
Sbjct: 181 ILAALILEVMEGNEGDALKIMIYLIDKVLPESYFVNNLRALSVDMAVFRDLLRLKLPELS 240
Query: 171 DHI----------SKVGVPWP---VIATKWFICMFADVLPVETVLRIWDCLFVEGPKILF 217
H+ S G P V +WF+ +FA LP TVL+IWD +F EG +I+
Sbjct: 241 QHLDTLQRTANKESGGGYEPPLTNVFTMQWFLTLFATCLPNHTVLKIWDSVFFEGSEIIL 300
Query: 218 RVSLTL-IKLHERALLECEDFTTLVECFKSMVR 249
RVSL + KL E+ +EC + T E + +M R
Sbjct: 301 RVSLAIWAKLGEQ--IECCE--TADEFYGTMGR 329
>sp|Q60949|TBCD1_MOUSE TBC1 domain family member 1 OS=Mus musculus GN=Tbc1d1 PE=1 SV=3
Length = 1255
Score = 95.9 bits (237), Expect = 4e-19, Method: Composition-based stats.
Identities = 54/183 (29%), Positives = 101/183 (55%), Gaps = 1/183 (0%)
Query: 67 IRTDLPRTFPENIFFRNSL-EHQQQLSRILKVFALDEKNIGYCQGLNYIAALILLVTKHE 125
I DL RTFP + +F L Q L ILK ++L ++ +GYCQGL+++A ++LL E
Sbjct: 935 ILIDLGRTFPTHPYFSAQLGAGQLSLYNILKAYSLLDQEVGYCQGLSFVAGILLLHMSEE 994
Query: 126 ENTYWIFRSVINKYFSDYYTKTLTGVVRDIDVLSELVKIKMPHLYDHISKVGVPWPVIAT 185
E + + + Y + + + LS L+ LY+H+ + + + A
Sbjct: 995 EAFKMLKFLMFDMGLRKQYRPDMIILQIQMYQLSRLLHDYHRDLYNHLEEHEIGPSLYAA 1054
Query: 186 KWFICMFADVLPVETVLRIWDCLFVEGPKILFRVSLTLIKLHERALLECEDFTTLVECFK 245
WF+ +FA P+ V R++D +F++G +++F+V+L+L+ H+ +L+ E+ T+V+ K
Sbjct: 1055 PWFLTVFASQFPLGFVARVFDMIFLQGSEVIFKVALSLLGSHKPLILQHENLETIVDFIK 1114
Query: 246 SMV 248
+ +
Sbjct: 1115 NTL 1117
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.139 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 122,841,765
Number of Sequences: 539616
Number of extensions: 4997653
Number of successful extensions: 15819
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 117
Number of HSP's successfully gapped in prelim test: 36
Number of HSP's that attempted gapping in prelim test: 15458
Number of HSP's gapped (non-prelim): 235
length of query: 337
length of database: 191,569,459
effective HSP length: 118
effective length of query: 219
effective length of database: 127,894,771
effective search space: 28008954849
effective search space used: 28008954849
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 61 (28.1 bits)