Query psy3328
Match_columns 337
No_of_seqs 216 out of 1591
Neff 9.2
Searched_HMMs 46136
Date Fri Aug 16 22:08:45 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3328.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/3328hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2058|consensus 100.0 6.7E-49 1.5E-53 360.8 21.0 239 4-251 145-386 (436)
2 KOG4567|consensus 100.0 4.1E-41 8.9E-46 289.5 17.1 259 4-268 24-361 (370)
3 smart00164 TBC Domain in Tre-2 100.0 7.1E-41 1.5E-45 287.5 17.5 195 12-213 1-198 (199)
4 KOG2223|consensus 100.0 3.1E-38 6.6E-43 281.8 17.6 236 3-250 289-541 (586)
5 KOG1092|consensus 100.0 3.4E-38 7.4E-43 281.3 13.0 265 3-270 176-476 (484)
6 COG5210 GTPase-activating prot 100.0 2.8E-37 6E-42 298.4 20.3 239 3-249 200-444 (496)
7 PF00566 RabGAP-TBC: Rab-GTPas 100.0 2E-36 4.3E-41 262.6 19.9 211 18-232 1-214 (214)
8 KOG2222|consensus 100.0 1.4E-36 3E-41 274.0 15.2 253 1-264 155-415 (848)
9 KOG1093|consensus 100.0 3.4E-36 7.4E-41 277.2 17.2 249 4-271 344-594 (725)
10 KOG4347|consensus 100.0 5.1E-33 1.1E-37 260.4 19.3 233 4-247 191-424 (671)
11 KOG3636|consensus 100.0 3.4E-31 7.5E-36 237.6 16.0 258 23-313 40-304 (669)
12 KOG4436|consensus 100.0 3.1E-29 6.8E-34 238.6 19.4 258 4-268 566-827 (948)
13 KOG2595|consensus 100.0 3.2E-28 6.8E-33 212.3 13.8 232 16-265 62-298 (395)
14 KOG1091|consensus 99.9 2.8E-27 6.2E-32 218.4 12.8 249 17-270 26-365 (625)
15 KOG2221|consensus 99.9 3E-27 6.4E-32 194.2 7.5 178 1-188 89-267 (267)
16 KOG1102|consensus 99.9 2.1E-26 4.6E-31 214.9 13.7 236 3-249 133-369 (397)
17 KOG2224|consensus 99.9 2.4E-24 5.1E-29 193.1 10.7 257 7-267 427-729 (781)
18 KOG2197|consensus 99.9 3.8E-21 8.1E-26 183.0 11.7 244 11-259 173-433 (488)
19 KOG4436|consensus 99.8 2.9E-18 6.4E-23 164.3 14.6 257 3-267 172-440 (948)
20 KOG2801|consensus 99.4 3.4E-12 7.4E-17 110.5 11.9 247 6-268 33-294 (559)
21 KOG1648|consensus 97.8 6E-07 1.3E-11 83.3 -6.0 229 6-247 549-785 (813)
22 PF14961 BROMI: Broad-minded p 97.6 0.0016 3.4E-08 67.4 14.7 156 92-248 1087-1260(1296)
23 KOG2058|consensus 96.4 0.0056 1.2E-07 57.8 5.3 58 261-318 244-301 (436)
24 KOG2197|consensus 68.6 2.2 4.7E-05 41.6 0.9 51 6-56 68-120 (488)
25 KOG4347|consensus 67.2 11 0.00025 37.3 5.4 47 272-318 298-344 (671)
26 KOG2224|consensus 59.8 3.6 7.9E-05 38.6 0.6 26 113-138 574-599 (781)
27 PF10815 ComZ: ComZ; InterPro 57.1 12 0.00025 24.3 2.3 40 157-196 5-44 (56)
28 KOG1102|consensus 55.1 2 4.4E-05 40.7 -2.0 108 95-227 24-131 (397)
29 KOG2221|consensus 48.9 17 0.00037 31.2 2.8 41 277-317 204-244 (267)
30 KOG2222|consensus 45.3 24 0.00053 33.8 3.5 44 275-318 271-315 (848)
31 smart00164 TBC Domain in Tre-2 44.3 49 0.0011 27.6 5.1 58 261-318 93-150 (199)
32 PF14165 YtzH: YtzH-like prote 35.1 14 0.00031 26.6 0.3 17 321-337 20-36 (87)
33 TIGR02433 lysidine_TilS_C tRNA 34.0 5.2 0.00011 25.0 -2.0 25 4-28 19-44 (47)
34 PF08109 Antimicrobial14: Lact 31.3 37 0.00081 18.5 1.4 16 105-120 3-18 (31)
35 PF00566 RabGAP-TBC: Rab-GTPas 21.4 2.5E+02 0.0053 23.3 5.6 58 261-318 91-148 (214)
36 COG5210 GTPase-activating prot 21.3 1.6E+02 0.0035 28.8 5.0 53 266-318 308-361 (496)
37 PF12829 Mhr1: Transcriptional 20.6 22 0.00048 26.0 -0.9 42 8-56 30-74 (91)
38 PF05979 DUF896: Bacterial pro 20.5 1.4E+02 0.0031 20.3 3.0 36 293-328 9-44 (65)
39 PF04181 RPAP2_Rtr1: Rtr1/RPAP 20.1 89 0.0019 22.0 2.1 20 306-325 6-25 (79)
No 1
>KOG2058|consensus
Probab=100.00 E-value=6.7e-49 Score=360.79 Aligned_cols=239 Identities=35% Similarity=0.676 Sum_probs=219.4
Q ss_pred hhHHHHHHhhcCCCCchHHHHHHHHhcChHhhhhhhhcccCCChhHHHHHHhcCC-CCcccHHHHHhccCccCCCC-ccc
Q psy3328 4 KKKKKKEEAEIKHTSTFDFSIWMIISEADTLKKVTHQTRHYGTGGYYAFMLNNKI-LDPDIGETIRTDLPRTFPEN-IFF 81 (337)
Q Consensus 4 ~~~klk~~~~~GiP~~~R~~vW~~llg~~~~~~~~~~~~~~~~~~~y~~ll~~~~-~~~~~~~~I~~Dv~Rt~~~~-~~f 81 (337)
.+.++|.++|+|||+.+|+.||..+.|...... .+..|..++.... ..++..++|+.|+.||||++ +.|
T Consensus 145 ~s~elk~liRkGiP~~~R~~VW~~~~g~~~~~~---------~~~~yq~ll~~~~~~~~~~~~qI~~DL~RTfP~n~~~~ 215 (436)
T KOG2058|consen 145 RSDELKRLIRKGIPPELRGEVWWVLSGARRQLN---------YPGYYQELLRKGDEKKSPVVKQIKLDLPRTFPDNFKGF 215 (436)
T ss_pred CcHHHHHHHHcCCChhhhhHHHHHHhcchhhcc---------CchhHHHHHhcCCCccchHHHHHHhccccccCCCcccC
Confidence 367899999999999999999999999222221 2789999998842 22369999999999999999 677
Q ss_pred cCChhh-HHHHHHHHHHHHhhcCCCCcccchHHHHHHHHhhcCChhHHHHHHHHHHHHhhhhhccCCchhhhhhHHHHHH
Q psy3328 82 RNSLEH-QQQLSRILKVFALDEKNIGYCQGLNYIAALILLVTKHEENTYWIFRSVINKYFSDYYTKTLTGVVRDIDVLSE 160 (337)
Q Consensus 82 ~~~~~~-~~~L~~iL~~~~~~~~~i~Y~QG~~~i~~~ll~~~~~e~~af~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (337)
...... ...|+|||.||+++||.||||||||++||++|+++.+|++|||+|..++.+++|+||++++.|.+.+..+++.
T Consensus 216 ~~~~~~~~~~LrRvL~Aya~hNp~vGYCQGmNflAallLL~~~~EE~AFW~Lv~iie~~lp~Yyt~nL~g~qvDQ~VL~~ 295 (436)
T KOG2058|consen 216 DSEDSDGRQTLRRVLLAYARHNPSVGYCQGMNFLAALLLLLMPSEEDAFWMLVALIENYLPRYYTPNLIGSQVDQKVLRE 295 (436)
T ss_pred CCCCchHHHHHHHHHHHHHhhCCCCcchhhHHHHHHHHHHhcCChHHHHHHHHHHHHHhchhhcCchhhhhhccHHHHHH
Confidence 764443 8999999999999999999999999999999999977999999999999999999999999999999999999
Q ss_pred HHHhhChhhhhhhhhcCCCcchhhhHhHHHhcccCCChhhHHHHHHHHhhcCChHHHHHHHHHHHHcHHHHhCCCCHHHH
Q psy3328 161 LVKIKMPHLYDHISKVGVPWPVIATKWFICMFADVLPVETVLRIWDCLFVEGPKILFRVSLTLIKLHERALLECEDFTTL 240 (337)
Q Consensus 161 ll~~~~P~L~~hl~~~~i~~~~~~~~W~~tlFs~~l~~~~~~~iwD~~l~~g~~~l~~~~lail~~~~~~il~~~~~~~i 240 (337)
+++..+|+|+.|+...+++..+++++||+|+|++.+|.+++++|||++|++|++++|++++|+++..+++|+++.+..++
T Consensus 296 llre~lPkl~~~l~~~~~~~~l~t~~wfLt~f~d~lP~~t~LrIwD~~f~eGskvlfr~Alai~k~~ee~il~~~~~~~i 375 (436)
T KOG2058|consen 296 LLREKLPKLSLHLEGNGVDASLETLPWFLTLFVDILPSETVLRIWDCLFYEGSKVLFRVALAILKKHEEEILKEDSSKEI 375 (436)
T ss_pred HHHHHCHHHHHhhhhcCCCeeeeehhhhHHHhcccccHHHHHHHHHHHHhcccHHHHHHHHHHHHHhHHHHhcCCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCC
Q psy3328 241 VECFKSMVRSP 251 (337)
Q Consensus 241 ~~~l~~~~~~~ 251 (337)
.+.+..++...
T Consensus 376 ~~~~~~~~~~~ 386 (436)
T KOG2058|consen 376 LRVLPDLTKRS 386 (436)
T ss_pred HHHHHHHHHHh
Confidence 99998887643
No 2
>KOG4567|consensus
Probab=100.00 E-value=4.1e-41 Score=289.48 Aligned_cols=259 Identities=20% Similarity=0.349 Sum_probs=224.9
Q ss_pred hhHHHHHHhhcCCC--CchHHHHHHHHhcChHhhhhhhhcccCCChhHHHHHHhcC------------------------
Q psy3328 4 KKKKKKEEAEIKHT--STFDFSIWMIISEADTLKKVTHQTRHYGTGGYYAFMLNNK------------------------ 57 (337)
Q Consensus 4 ~~~klk~~~~~GiP--~~~R~~vW~~llg~~~~~~~~~~~~~~~~~~~y~~ll~~~------------------------ 57 (337)
+-++++..+..|+| ..+|+.+|+.+||+.+.....|.....+.++.|...++..
T Consensus 24 d~kelr~~~~~g~p~~~~lR~~~WkllL~Yl~~er~~w~s~La~~R~~Y~q~i~e~v~epg~~~~~~~v~~~D~~~dhPl 103 (370)
T KOG4567|consen 24 DLKELRKLCFYGVPDDASLRPLVWKLLLGYLPPERSKWTSFLAKKRSLYKQFIEEIVDEPGKKDNSKKVDSNDTDEDHPL 103 (370)
T ss_pred hHHHHHHHhhcCCCCccchhHhHHHHHHhhcChhhhhhHHHHHHHHHHHHHHHHHhccCccccccccccccCcccccCCC
Confidence 45789999999999 6899999999999999888888887777778887766542
Q ss_pred -----------CCCcccHHHHHhccCccCCCCccccCChh------------------------h--HHHHHHHHHHHHh
Q psy3328 58 -----------ILDPDIGETIRTDLPRTFPENIFFRNSLE------------------------H--QQQLSRILKVFAL 100 (337)
Q Consensus 58 -----------~~~~~~~~~I~~Dv~Rt~~~~~~f~~~~~------------------------~--~~~L~~iL~~~~~ 100 (337)
..+.+...||++|+.||.|+.++|..... + ....+|||..||+
T Consensus 104 s~~~~sdwn~ff~d~e~l~QIdrDvrr~~pdi~ff~~~~~~p~~~~~~~~~~i~~~q~~~~n~~gl~~~~~erilfiyAK 183 (370)
T KOG4567|consen 104 SLGPTSDWNTFFKDCEVLLQIDRDVRRTHPDISFFQLASSYPCRQGMDSRRRINASQEAGRNRLGLTRFAAERILFIYAK 183 (370)
T ss_pred CCCchhhHHHHhhhhHHHHHHHHHHHHhCcchHhhhhccccccccchhhHhhhhhhhHhhhcccchhhhHHHHHHHHHhh
Confidence 23446789999999999999888763110 1 2346899999999
Q ss_pred hcCCCCcccchHHHHHHHHhhcC----------ChhHHHHHHHHHHHHhhhhhc----cCCchhhhhhHHHHHHHHHhhC
Q psy3328 101 DEKNIGYCQGLNYIAALILLVTK----------HEENTYWIFRSVINKYFSDYY----TKTLTGVVRDIDVLSELVKIKM 166 (337)
Q Consensus 101 ~~~~i~Y~QG~~~i~~~ll~~~~----------~e~~af~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~~~ll~~~~ 166 (337)
.||.++|+||||+|+||+++++. .|+|||.||..+|.. ++++| ..+..|++..+..+..+++++|
T Consensus 184 LNpGi~YVQGMNEIlaPiYYVfa~Dpd~e~~~~aEaDaFFCF~~LMse-irDnf~k~LDdS~~GI~~~Msr~~~~lk~~D 262 (370)
T KOG4567|consen 184 LNPGIGYVQGMNEILAPIYYVFANDPDEENRAYAEADAFFCFTQLMSE-IRDNFIKTLDDSVGGIHFLMSRLSELLKKHD 262 (370)
T ss_pred cCCcchHHhhhHHHhhhhheeeccCCchhhHHhhhhhHHHHHHHHHHH-HHHHHHHhccccccchHHHHHHHHHHHHHhh
Confidence 99999999999999999999984 379999999999988 45444 3556778888999999999999
Q ss_pred hhhhhhhhhcCCCcchhhhHhHHHhcccCCChhhHHHHHHHHhhcCCh--HHHHHHHHHHHHcHHHHhCCCCHHHHHHHH
Q psy3328 167 PHLYDHISKVGVPWPVIATKWFICMFADVLPVETVLRIWDCLFVEGPK--ILFRVSLTLIKLHERALLECEDFTTLVECF 244 (337)
Q Consensus 167 P~L~~hl~~~~i~~~~~~~~W~~tlFs~~l~~~~~~~iwD~~l~~g~~--~l~~~~lail~~~~~~il~~~~~~~i~~~l 244 (337)
-+||.||++.++.|..|+++|+..+++.+||+++++++||.+|+.... ++.++|.|+++..|+.|++ .|+..-+++|
T Consensus 263 ~EL~~~L~~~~i~PqfyaFRWitLLLsQEF~lpDvi~lWDsl~sD~~rfd~Ll~iCcsmlil~Re~il~-~DF~~nmkLL 341 (370)
T KOG4567|consen 263 EELWRHLEEKEIHPQFYAFRWITLLLSQEFPLPDVIRLWDSLLSDPQRFDFLLYICCSMLILVRERILE-GDFTVNMKLL 341 (370)
T ss_pred HHHHHHHHhcCCCccchhHHHHHHHHhccCCchhHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHh-cchHHHHHHH
Confidence 999999999999999999999999999999999999999999998665 8999999999999999998 4999999999
Q ss_pred HcCCCCCcccccchhhhhHHHHHH
Q psy3328 245 KSMVRSPAVLNCHSFMSGLNYIAA 268 (337)
Q Consensus 245 ~~~~~~~~~~d~~~~i~~a~~~~~ 268 (337)
++.|. +|+..++..|-+++.
T Consensus 342 Q~yp~----tdi~~~l~~A~~Lr~ 361 (370)
T KOG4567|consen 342 QNYPT----TDISKMLAVADSLRD 361 (370)
T ss_pred hcCCC----CCHHHHHHHHHHHHh
Confidence 99987 799999888877775
No 3
>smart00164 TBC Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs. Widespread domain present in Gyp6 and Gyp7, thereby giving rise to the notion that it performs a GTP-activator activity on Rab-like GTPases.
Probab=100.00 E-value=7.1e-41 Score=287.49 Aligned_cols=195 Identities=34% Similarity=0.687 Sum_probs=176.1
Q ss_pred hhcCCCCchHHHHHHHHhcChHhhhhhhhcccCCChhHHHHHHhcCCCC-cccHHHHHhccCccCCCCccccCCh-hhHH
Q psy3328 12 AEIKHTSTFDFSIWMIISEADTLKKVTHQTRHYGTGGYYAFMLNNKILD-PDIGETIRTDLPRTFPENIFFRNSL-EHQQ 89 (337)
Q Consensus 12 ~~~GiP~~~R~~vW~~llg~~~~~~~~~~~~~~~~~~~y~~ll~~~~~~-~~~~~~I~~Dv~Rt~~~~~~f~~~~-~~~~ 89 (337)
.++|||+++|+.+|+.++|+.....+ .....|+++++..... ....++|++|+.||+|+++.|.... ..++
T Consensus 1 ~~~Gip~~~R~~vW~~ll~~~~~~~~-------~~~~~Y~~l~~~~~~~~~~~~~~I~~Dv~Rt~~~~~~f~~~~~~~~~ 73 (199)
T smart00164 1 VRKGVPPSLRGVVWKLLLNAQPMDTS-------ADKDLYSRLLKETAPKDKSIVHQIEKDLRRTFPEHSFFQDKEGPGQE 73 (199)
T ss_pred CCCCCCHHHHHHHHHHHhCCchhhhc-------ccchHHHHHHHhhcCCChhhHHHHhcccCCCCCCchhhcCCCcccHH
Confidence 36899999999999999999987643 1268899999884322 2357999999999999999998633 4699
Q ss_pred HHHHHHHHHHhhcCCCCcccchHHHHHHHHhhcCChhHHHHHHHHHHHHhhhhhccCCchhhhhhHHHHHHHHHhhChhh
Q psy3328 90 QLSRILKVFALDEKNIGYCQGLNYIAALILLVTKHEENTYWIFRSVINKYFSDYYTKTLTGVVRDIDVLSELVKIKMPHL 169 (337)
Q Consensus 90 ~L~~iL~~~~~~~~~i~Y~QG~~~i~~~ll~~~~~e~~af~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~P~L 169 (337)
.|.|||.+|+.++|++||+|||++||++++.++.+|++|||+|.++|++..+++|.++.+++...+..++.++++++|+|
T Consensus 74 ~L~~IL~~~~~~~p~~gY~QGm~~i~~~ll~~~~~e~~af~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~p~l 153 (199)
T smart00164 74 SLRRVLKAYALYNPEVGYCQGMNFLAAPLLLVMPDEEDAFWCLVKLMERYGPNFYLPDMSGLQLDLLQLDRLVKEYDPDL 153 (199)
T ss_pred HHHHHHHHHHHHCCCCceeccHHHHHHHHHHhcCCHHHHHHHHHHHHHHhCcccCCCChHHHHHHHHHHHHHHHHHCHHH
Confidence 99999999999999999999999999999999977999999999999998778888888899999999999999999999
Q ss_pred hhhhhh-cCCCcchhhhHhHHHhcccCCChhhHHHHHHHHhhcCC
Q psy3328 170 YDHISK-VGVPWPVIATKWFICMFADVLPVETVLRIWDCLFVEGP 213 (337)
Q Consensus 170 ~~hl~~-~~i~~~~~~~~W~~tlFs~~l~~~~~~~iwD~~l~~g~ 213 (337)
++||.+ .|+++..|+.+|++|+|++.+|++.+.++||.++.+|+
T Consensus 154 ~~~l~~~~~i~~~~~~~~W~~~lF~~~~~~~~~~riwD~~l~eG~ 198 (199)
T smart00164 154 YKHLKDKLGIDPSLYALRWFLTLFARELPLEIVLRIWDVLFAEGS 198 (199)
T ss_pred HHHHHHhcCCCchhHHHHHHHHHHHhhCCHHHHHHHHHHHHhcCC
Confidence 999996 99999999999999999999999999999999999986
No 4
>KOG2223|consensus
Probab=100.00 E-value=3.1e-38 Score=281.78 Aligned_cols=236 Identities=20% Similarity=0.416 Sum_probs=210.9
Q ss_pred hhhHHHHHHhhcCCCCchHHHHHHHHhcChHhhhhhhhcccCCChhHHHHHHhcC----------------CCCcccHHH
Q psy3328 3 KKKKKKKEEAEIKHTSTFDFSIWMIISEADTLKKVTHQTRHYGTGGYYAFMLNNK----------------ILDPDIGET 66 (337)
Q Consensus 3 ~~~~klk~~~~~GiP~~~R~~vW~~llg~~~~~~~~~~~~~~~~~~~y~~ll~~~----------------~~~~~~~~~ 66 (337)
+++++.+++.+.|||+..|++||....|..-.... +.|...+... ........+
T Consensus 289 ~~SrR~relWwQGiP~~VRGkvW~laIGNel~it~----------elfd~~la~Aker~ak~~aeq~~~sa~~re~sv~~ 358 (586)
T KOG2223|consen 289 LKSRRVRELWWQGIPPSVRGKVWSLAIGNELNITY----------ELFDIALARAKEREAKSLAEQMSNSAADREASVEL 358 (586)
T ss_pred HhhHHHHHHHHccCChhhcchhhHhhhCcccccCH----------HHHHHHHHHHHHHHHHHHHhhcccchhhhhcchhh
Confidence 56789999999999999999999999986443221 2232222211 223456789
Q ss_pred HHhccCccCCCCccccCChhhHHHHHHHHHHHHhhcCCCCcccchHHHHHHHHhhcCChhHHHHHHHHHHHHhhh-hhcc
Q psy3328 67 IRTDLPRTFPENIFFRNSLEHQQQLSRILKVFALDEKNIGYCQGLNYIAALILLVTKHEENTYWIFRSVINKYFS-DYYT 145 (337)
Q Consensus 67 I~~Dv~Rt~~~~~~f~~~~~~~~~L~~iL~~~~~~~~~i~Y~QG~~~i~~~ll~~~~~e~~af~~~~~l~~~~~~-~~~~ 145 (337)
|+.|+.||||+...|+....-...|..+|.||+.|.|++||+|||.+|+|+|++.+ ++.+||.+|.+++++.++ .||.
T Consensus 359 i~LDisrTfpsl~iFqk~GPy~d~L~~lL~AYt~yRpDvgYVqgmSFIaAvLllnm-d~~~AFiafANLLdkp~q~Aff~ 437 (586)
T KOG2223|consen 359 IKLDISRTFPSLSIFQKGGPYHDDLHSLLGAYTCYRPDVGYVQGMSFIAAVLLLNM-DLADAFIAFANLLDKPCQQAFFR 437 (586)
T ss_pred eeechhccCcceeeeccCCchHHHHHHHhhhheeecCccccccchHHHHHHHHHcC-CcHHHHHHHHHHhccHHHHHHHh
Confidence 99999999999999998555599999999999999999999999999999999999 899999999999999766 8999
Q ss_pred CCchhhhhhHHHHHHHHHhhChhhhhhhhhcCCCcchhhhHhHHHhcccCCChhhHHHHHHHHhhcCChHHHHHHHHHHH
Q psy3328 146 KTLTGVVRDIDVLSELVKIKMPHLYDHISKVGVPWPVIATKWFICMFADVLPVETVLRIWDCLFVEGPKILFRVSLTLIK 225 (337)
Q Consensus 146 ~~~~~~~~~~~~~~~ll~~~~P~L~~hl~~~~i~~~~~~~~W~~tlFs~~l~~~~~~~iwD~~l~~g~~~l~~~~lail~ 225 (337)
.+.+.+...+..|+..+++..|+|+.||.+.++.|+.|+..|+.++|+..+|++..+||||+|+.+|..|+|+.+++|++
T Consensus 438 ~d~s~m~~yf~tfe~~leenlp~L~~Hl~kl~l~PDiylidwiftlyskslpldlacRIwDvy~rdgeeFlfr~~lgIlk 517 (586)
T KOG2223|consen 438 VDHSSMLSYFATFEVFLEENLPKLFTHLKKLELTPDIYLIDWIFTLYSKSLPLDLACRIWDVYCRDGEEFLFRTALGILK 517 (586)
T ss_pred cCcHHHHHHHHHHHHHHHhccHHHHHHHHhccCCCchhhHHHHHHHHhccCChHHhhhhhheeeecchHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcHHHHhCCCCHHHHHHHHHcCCCC
Q psy3328 226 LHERALLECEDFTTLVECFKSMVRS 250 (337)
Q Consensus 226 ~~~~~il~~~~~~~i~~~l~~~~~~ 250 (337)
.+++.++.+ |+..+.++|..+|.+
T Consensus 518 lyepkLl~m-Df~~~~qfLtklp~d 541 (586)
T KOG2223|consen 518 LYEPKLLVM-DFIHVAQFLTKLPED 541 (586)
T ss_pred HccchHhhh-hHHHHHHHHHhCccc
Confidence 999999986 999999999998865
No 5
>KOG1092|consensus
Probab=100.00 E-value=3.4e-38 Score=281.32 Aligned_cols=265 Identities=21% Similarity=0.330 Sum_probs=232.2
Q ss_pred hhhHHHHHHhhcCCCCchHHHHHHHHhcChHhhhhhhhcccCCChhHHHHHHhcC-------CCCcccHHHHHhccCccC
Q psy3328 3 KKKKKKKEEAEIKHTSTFDFSIWMIISEADTLKKVTHQTRHYGTGGYYAFMLNNK-------ILDPDIGETIRTDLPRTF 75 (337)
Q Consensus 3 ~~~~klk~~~~~GiP~~~R~~vW~~llg~~~~~~~~~~~~~~~~~~~y~~ll~~~-------~~~~~~~~~I~~Dv~Rt~ 75 (337)
+.-++++++|..|||..+|+.+|+.++|+.+...+.++-........|.+++.+. ..+.+..+||.-|+.|+.
T Consensus 176 id~~~Lr~l~w~Gvp~~~Rp~~Wkll~gylp~n~~rr~~~l~~Kr~eY~~~v~~~~~~~~~~~~~~d~~rQI~id~prm~ 255 (484)
T KOG1092|consen 176 IDLEKLRKLCWNGVPSKMRPIVWKLLSGYLPPNSDRREGTLQRKRKEYVDSVVQYFDSLTNGDEDQDTWRQIPIDIPRMN 255 (484)
T ss_pred ccHHHHHHHccCCCCccccCccceeeecccCcchhhhhhhHHHHHHHHHHHHHHHhccCCCccccCccccccccCCCCCC
Confidence 4568999999999999999999999999988877654443333455666665542 345568999999999999
Q ss_pred CCCccccCChhhHHHHHHHHHHHHhhcCCCCcccchHHHHHHHHhhcC-------------------------ChhHHHH
Q psy3328 76 PENIFFRNSLEHQQQLSRILKVFALDEKNIGYCQGLNYIAALILLVTK-------------------------HEENTYW 130 (337)
Q Consensus 76 ~~~~~f~~~~~~~~~L~~iL~~~~~~~~~i~Y~QG~~~i~~~ll~~~~-------------------------~e~~af~ 130 (337)
|.-+.|.. +..++.++|||..++.++|..||+||.++++.|++.++. -|+||||
T Consensus 256 p~~~l~q~-~~vq~~lerIl~iwairhpAsGyvqgindlvtpf~vvfl~e~l~~~~~~~~~d~~~l~~E~~~~iEADsyW 334 (484)
T KOG1092|consen 256 PHIPLFQQ-KIVQEMLERILYIWAIRHPASGYVQGINDLVTPFFVVFLSEYLGPIMDVESIDMSLLPAENAEDIEADAYW 334 (484)
T ss_pred ccccchhh-HHHHHHHHHHHHHHHHhcccccccccceeeechhhhhhhHhhcCccccccccchhhccHHHHhhhhhhHHH
Confidence 99888887 566999999999999999999999999999998887752 1789999
Q ss_pred HHHHHHHHhhhhhccCCchhhhhhHHHHHHHHHhhChhhhhhhhhcCCCcchhhhHhHHHhcccCCChhhHHHHHHHHhh
Q psy3328 131 IFRSVINKYFSDYYTKTLTGVVRDIDVLSELVKIKMPHLYDHISKVGVPWPVIATKWFICMFADVLPVETVLRIWDCLFV 210 (337)
Q Consensus 131 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~P~L~~hl~~~~i~~~~~~~~W~~tlFs~~l~~~~~~~iwD~~l~ 210 (337)
|+.+|++. +++.|....+|++...+.++.+++..|+.+++||..+|++..+|+++|+.++|.+++|+..++|+||-|++
T Consensus 335 ClskLLD~-IQDNYtfaQpGIq~kV~~L~eLv~RID~~~hkHlq~~gveylQFAFRWmNcLLmRE~pl~~~iRlWDTY~a 413 (484)
T KOG1092|consen 335 CLSKLLDG-IQDNYTFAQPGIQRKVKNLKELVQRIDEPLHKHLQEHGVEYLQFAFRWMNCLLMREFPLRCTIRLWDTYLA 413 (484)
T ss_pred HHHHHHHH-hhhhhhhcChhHHHHHHHHHHHHHHhcHHHHHHHHHhchHHHHHHHHHHHHHHHhhccchhHHHHHHHhhc
Confidence 99999998 78888899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCh---HHHHHHHHHHHHcHHHHhCCCCHHHHHHHHHcCCCCCc-ccccchhhhhHHHHHHHH
Q psy3328 211 EGPK---ILFRVSLTLIKLHERALLECEDFTTLVECFKSMVRSPA-VLNCHSFMSGLNYIAALI 270 (337)
Q Consensus 211 ~g~~---~l~~~~lail~~~~~~il~~~~~~~i~~~l~~~~~~~~-~~d~~~~i~~a~~~~~~~ 270 (337)
+++. |+.|+|+|.|..++++|++ .|+.+++.+|+++|...+ ..+++-++.+|+......
T Consensus 414 E~dgf~~FhvYvcAAFL~kW~~eL~e-~DFQ~~ilfLQnlPT~~W~d~eIellLseA~~~k~~f 476 (484)
T KOG1092|consen 414 EPDGFNEFHVYVCAAFLLKWSSELME-NDFQELILFLQNLPTHNWSDREIELLLSEAFRLKSVF 476 (484)
T ss_pred CccchHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHhcCCCCCccHHHHHHHHHHHHHHHHHH
Confidence 9654 8999999999999999996 599999999999998663 477888888888777644
No 6
>COG5210 GTPase-activating protein [General function prediction only]
Probab=100.00 E-value=2.8e-37 Score=298.41 Aligned_cols=239 Identities=32% Similarity=0.605 Sum_probs=213.8
Q ss_pred hhhHHHHHHhhcCCCCchHHHHHHHHhcChHhhhhhhhcccCCChhHHHHHHhcC---CCCc-ccHHHHHhccCccCCCC
Q psy3328 3 KKKKKKKEEAEIKHTSTFDFSIWMIISEADTLKKVTHQTRHYGTGGYYAFMLNNK---ILDP-DIGETIRTDLPRTFPEN 78 (337)
Q Consensus 3 ~~~~klk~~~~~GiP~~~R~~vW~~llg~~~~~~~~~~~~~~~~~~~y~~ll~~~---~~~~-~~~~~I~~Dv~Rt~~~~ 78 (337)
+...+++.+++.|||+.+|+.+|..++|+...... ....|..+.+.. .... ....+|++|+.||++.+
T Consensus 200 ~~~~~~~~~i~~gip~~~r~~vw~~~~~~~~~~~~--------~~~~y~~~~~~~~~~~~~~~~~~~~i~~Dl~rt~~~~ 271 (496)
T COG5210 200 VQLSKLRELIRKGIPNELRGDVWEFLLGIGFDLDK--------NPGLYERLLNLHREAKIPTQEIISQIEKDLSRTFPDN 271 (496)
T ss_pred hhHHHHHHHHHhcCChHhhhhhHHHHhccchhhcc--------CchHHHHHHHHHHhcCCCcHHHHHHHHcccccccccc
Confidence 35678999999999999999999999999887776 667777777632 1222 36999999999999999
Q ss_pred ccccCChhhHH-HHHHHHHHHHhhcCCCCcccchHHHHHHHHhhcCChhHHHHHHHHHHH-HhhhhhccCCchhhhhhHH
Q psy3328 79 IFFRNSLEHQQ-QLSRILKVFALDEKNIGYCQGLNYIAALILLVTKHEENTYWIFRSVIN-KYFSDYYTKTLTGVVRDID 156 (337)
Q Consensus 79 ~~f~~~~~~~~-~L~~iL~~~~~~~~~i~Y~QG~~~i~~~ll~~~~~e~~af~~~~~l~~-~~~~~~~~~~~~~~~~~~~ 156 (337)
..|+.....+. .|+|||.+|+.++|++||||||++++|+|+.++.+|++||||+++++. .+++++|.++..|+...+.
T Consensus 272 ~~f~~~~s~~~~~L~rvL~ays~~~p~vgY~QgMn~l~a~ll~~~~~Ee~AF~~l~~L~~~~~l~~~~~~~~~G~~~~~~ 351 (496)
T COG5210 272 SLFQTEISIRAENLRRVLKAYSLYNPEVGYVQGMNFLAAPLLLVLESEEQAFWCLVKLLKNYGLPGYFLKNLSGLHRDLK 351 (496)
T ss_pred ccccCcccccHHHHHHHHHHHHhcCCCCceeccHHHHHHHHHHHhhhhHHHHHHHHHHHHhccchhhcccCCcHHHHHHH
Confidence 99987433333 599999999999999999999999999999999669999999999999 4499999999999999999
Q ss_pred HHHHHHHhhChhhhhhhhhcCCCcchhhhHhHHHhcccCCChhhHHHHHHHHhhcCChHHHHHHHHHHHHcHHHHhCCCC
Q psy3328 157 VLSELVKIKMPHLYDHISKVGVPWPVIATKWFICMFADVLPVETVLRIWDCLFVEGPKILFRVSLTLIKLHERALLECED 236 (337)
Q Consensus 157 ~~~~ll~~~~P~L~~hl~~~~i~~~~~~~~W~~tlFs~~l~~~~~~~iwD~~l~~g~~~l~~~~lail~~~~~~il~~~~ 236 (337)
.+..+++..+|++|+|+...|+....|+++||+++|.+.+|++.++|+||++|.+|..+++.+++|++...+..++...+
T Consensus 352 ~l~~~v~~~~p~l~~hl~~~~~~~~~~~~~w~l~lF~~~~p~e~~lriwD~lf~eg~~~l~~~~~~~l~~~~~~l~~~~~ 431 (496)
T COG5210 352 VLDDLVEELDPELYEHLLREGVVLLMFAFRWFLTLFVREFPLEYALRIWDCLFLEGSSMLFQLALAILKLLRDKLLKLDS 431 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCchhhhhHHHHHHHHHhcCCHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999877
Q ss_pred HHHHHHHHHcCCC
Q psy3328 237 FTTLVECFKSMVR 249 (337)
Q Consensus 237 ~~~i~~~l~~~~~ 249 (337)
...+...+.....
T Consensus 432 ~~~~~~~~~~~~~ 444 (496)
T COG5210 432 DELLDLLLKQLFL 444 (496)
T ss_pred hhHHHHHHHhhhh
Confidence 7776666665543
No 7
>PF00566 RabGAP-TBC: Rab-GTPase-TBC domain; InterPro: IPR000195 Identification of a TBC domain in GYP6_YEAST and GYP7_YEAST, which are GTPase activator proteins of yeast Ypt6 and Ypt7, imply that these domains are GTPase activator proteins of Rab-like small GTPases [].; GO: 0005097 Rab GTPase activator activity, 0032313 regulation of Rab GTPase activity, 0005622 intracellular; PDB: 2G77_A 1FKM_A 3HZJ_A 3QYE_A 2QFZ_A 3QYB_A 2QQ8_A 3DZX_A 3QWL_A.
Probab=100.00 E-value=2e-36 Score=262.61 Aligned_cols=211 Identities=32% Similarity=0.649 Sum_probs=172.0
Q ss_pred CchHHHHHHHHhcChH-hhhhhhhcccCCChhHH-HHHHhcCCCCcccHHHHHhccCccCCCCccccCChhhHHHHHHHH
Q psy3328 18 STFDFSIWMIISEADT-LKKVTHQTRHYGTGGYY-AFMLNNKILDPDIGETIRTDLPRTFPENIFFRNSLEHQQQLSRIL 95 (337)
Q Consensus 18 ~~~R~~vW~~llg~~~-~~~~~~~~~~~~~~~~y-~~ll~~~~~~~~~~~~I~~Dv~Rt~~~~~~f~~~~~~~~~L~~iL 95 (337)
+++|+.+|+.++|+.+ ......... . ..... .........+.+..++|++|+.||++....+.. ...+..|.+||
T Consensus 1 ~~~R~~vW~~ll~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~I~~Dv~rt~~~~~~~~~-~~~~~~l~~iL 77 (214)
T PF00566_consen 1 HSLRGQVWKILLGIEPNYSNNYQDEK-N-QWEQIESKSSNSNKLDNKIFEQIDKDVNRTFPNSFLFKN-EQNQKSLERIL 77 (214)
T ss_dssp -CCHHHHHHHHCTCSCHHHHHHHHHH-H-HHHHHHHHHHHCTSTCHTCHHHHHHHHCTSSTSCCCSTT-HHHHHHHHHHH
T ss_pred CChHHHHHHHHHccchhhhhhHHHHh-h-hhhhhhHHHHHhccccchHHHHHHHhhhhhcccchhhhh-cchHHHHHHHH
Confidence 3689999999999964 000000000 0 01111 111122145667799999999999995544444 56799999999
Q ss_pred HHHHhhcCCCCcccchHHHHHHHHhhcCChhHHHHHHHHHHHHhhhhhccCCchhhhhhHHHHHHHHHhhChhhhhhhhh
Q psy3328 96 KVFALDEKNIGYCQGLNYIAALILLVTKHEENTYWIFRSVINKYFSDYYTKTLTGVVRDIDVLSELVKIKMPHLYDHISK 175 (337)
Q Consensus 96 ~~~~~~~~~i~Y~QG~~~i~~~ll~~~~~e~~af~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~P~L~~hl~~ 175 (337)
.+|+.++|++||+|||++|+++++.+..+|++|||++.++++..+++++.++.+++...+..++.++++++|++++||.+
T Consensus 78 ~~~~~~~~~~~Y~qG~~~i~~~ll~~~~~e~~af~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~P~l~~~l~~ 157 (214)
T PF00566_consen 78 SAYAKYNPDVGYCQGMNDIAAPLLLVFLDEEEAFWCFVQLLNYYLPDFFQPNFKGLQKILKIFEQLLKKHDPELYNHLKQ 157 (214)
T ss_dssp HHHHHHTTTTSS-TTHHHHHHHHHHTCSHHHHHHHHHHHHHTHHGGGGTSTTHHHHHHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred HHhccccccccccchhhhhhhhhhhhcccccchhccccchhcccccccccccccccchhhhhHHHHHHhhhhhhhhhhhh
Confidence 99999999999999999999999977779999999999999666889999998999999999999999999999999999
Q ss_pred cCCCcchhhhHhHHHhcccCCChhhHHHHHHHHhhcCChH-HHHHHHHHHHHcHHHHh
Q psy3328 176 VGVPWPVIATKWFICMFADVLPVETVLRIWDCLFVEGPKI-LFRVSLTLIKLHERALL 232 (337)
Q Consensus 176 ~~i~~~~~~~~W~~tlFs~~l~~~~~~~iwD~~l~~g~~~-l~~~~lail~~~~~~il 232 (337)
.|+++..|+.+|+.|+|++.+|.+.+.++|| ++.+|+++ ++++++|++...|++||
T Consensus 158 ~~~~~~~~~~~w~~~lF~~~l~~~~~~~lwD-~l~~g~~~~l~~~~lail~~~~~~il 214 (214)
T PF00566_consen 158 LGVDPEIYAFPWFLTLFSRSLPFDDVLRLWD-FLLEGYKFFLFFIALAILKYLRDQIL 214 (214)
T ss_dssp TT-GGHHHHHHHHHTTTTTTS-HHHHHHHHH-HHHHCTTHHHHHHHHHHHHHTHHHHH
T ss_pred hhhhhhhhhhhhhHhhcCCcCCHHHHHHHHH-HHHcCCCcHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999 77799886 99999999999999986
No 8
>KOG2222|consensus
Probab=100.00 E-value=1.4e-36 Score=274.04 Aligned_cols=253 Identities=28% Similarity=0.508 Sum_probs=230.3
Q ss_pred CchhhHHHHHHhhcC-CCCchHHHHHHHHhcChHhhhhhhhcccCCChhHHHHHHhcC-CCCcccHHHHHhccCccCCCC
Q psy3328 1 MYKKKKKKKEEAEIK-HTSTFDFSIWMIISEADTLKKVTHQTRHYGTGGYYAFMLNNK-ILDPDIGETIRTDLPRTFPEN 78 (337)
Q Consensus 1 ~~~~~~klk~~~~~G-iP~~~R~~vW~~llg~~~~~~~~~~~~~~~~~~~y~~ll~~~-~~~~~~~~~I~~Dv~Rt~~~~ 78 (337)
|.-+++|++++.+.| ||..+|+.+|+.|.|...+... ....|.+++..+ .....+..||++|+-|+.|++
T Consensus 155 ~~~ktdk~~~llkeggiphslr~~lw~rlsga~~kkk~--------ae~sy~~ilk~~andk~~~~~qiekdllr~lpnn 226 (848)
T KOG2222|consen 155 MELKTDKFEELLKEGGIPHSLRAFLWMRLSGALAKKKD--------AETSYEDILKACANDKLMIGKQIEKDLLRILPNN 226 (848)
T ss_pred cccchHHHHHHHHcCCCCcchhHHHHHHhhhhhhhhcc--------ccccHHHHHHHhcccccchhHHHHHHHHHhCCCc
Confidence 566889999999985 9999999999999999887766 457799988875 344567899999999999999
Q ss_pred ccccCChh-hHHHHHHHHHHHHhhcCCCCcccchHHHHHHHHhhcCChhHHHHHHHHHHHHhhh-hhccCCchhhhhhHH
Q psy3328 79 IFFRNSLE-HQQQLSRILKVFALDEKNIGYCQGLNYIAALILLVTKHEENTYWIFRSVINKYFS-DYYTKTLTGVVRDID 156 (337)
Q Consensus 79 ~~f~~~~~-~~~~L~~iL~~~~~~~~~i~Y~QG~~~i~~~ll~~~~~e~~af~~~~~l~~~~~~-~~~~~~~~~~~~~~~ 156 (337)
.+|...+. +...|+|||.+.++..|++||||||..|+|.+++++ .|+.|||++.+++...+| +||++..-|++..-+
T Consensus 227 ~cf~k~n~~gi~~lrrilk~ia~ifpdigycqg~gviva~lllf~-~ee~afwmmaaiiedilp~nfysqtllgiqader 305 (848)
T KOG2222|consen 227 ACFSKKNGEGIEALRRILKCIAFIFPDIGYCQGMGVIVACLLLFC-EEENAFWMMAAIIEDILPANFYSQTLLGIQADER 305 (848)
T ss_pred ceeeCCCCcchHHHHHHHhhheeecCCcccccCccHHHHHHHHHh-cchhHHHHHHHHHHHhcCchhhhhhHhccchhHH
Confidence 99987443 499999999999999999999999999999999999 899999999999999988 999999999999999
Q ss_pred HHHHHHHhhChhhhhhhhhcCCCcchhhhHhHHHhcccCCChhhHHHHHHHHhhcCChHHHHHHHHHHHHcHHHHhCC--
Q psy3328 157 VLSELVKIKMPHLYDHISKVGVPWPVIATKWFICMFADVLPVETVLRIWDCLFVEGPKILFRVSLTLIKLHERALLEC-- 234 (337)
Q Consensus 157 ~~~~ll~~~~P~L~~hl~~~~i~~~~~~~~W~~tlFs~~l~~~~~~~iwD~~l~~g~~~l~~~~lail~~~~~~il~~-- 234 (337)
+...++.-|.|.+-+.|....++.++....||+|+|++.+....++|+||+||.+|...+|.+.++|++.-+.+|...
T Consensus 306 v~~~li~~~l~~ldeal~~~dielslitl~w~ltlf~nv~~~killriwd~~fy~g~i~ifql~i~ilkmkeqdi~~iae 385 (848)
T KOG2222|consen 306 VMHHLIACHLPDLDEALEDHDIELSLITLHWFLTLFANVFHMKILLRIWDFFFYEGGINIFQLIIGILKMKEQDIKEIAE 385 (848)
T ss_pred HHHHHHHhccCchhHHHHhccceeeehHHHHHHHHHHHHHHHHHHHHHHHhheecCcchhHHHHHHHHHhhHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999988765
Q ss_pred --CCHHHHHHHHHcCCCCCcccccchhhhhHH
Q psy3328 235 --EDFTTLVECFKSMVRSPAVLNCHSFMSGLN 264 (337)
Q Consensus 235 --~~~~~i~~~l~~~~~~~~~~d~~~~i~~a~ 264 (337)
++..++...+.++|.. ..|++.++..+-
T Consensus 386 ttensa~if~als~ip~~--vtdve~l~~~~~ 415 (848)
T KOG2222|consen 386 TTENSADIFNALSDIPAE--VTDVEKLFEQAG 415 (848)
T ss_pred hcccHHHHHHHHHhCCch--hhhHHHHHHHHh
Confidence 6889999999999864 578888877763
No 9
>KOG1093|consensus
Probab=100.00 E-value=3.4e-36 Score=277.22 Aligned_cols=249 Identities=20% Similarity=0.378 Sum_probs=222.7
Q ss_pred hhHHHHHHhhcCCCCchHHHHHHHHhcChHhhhhhhhcccCCChhHHHHHHhcCCCCcccHHHHHhccCccCCCCccccC
Q psy3328 4 KKKKKKEEAEIKHTSTFDFSIWMIISEADTLKKVTHQTRHYGTGGYYAFMLNNKILDPDIGETIRTDLPRTFPENIFFRN 83 (337)
Q Consensus 4 ~~~klk~~~~~GiP~~~R~~vW~~llg~~~~~~~~~~~~~~~~~~~y~~ll~~~~~~~~~~~~I~~Dv~Rt~~~~~~f~~ 83 (337)
+..++-...+.|+|+.+|+.+|..|||+...... +..++++ .......+||+.|+.|+.........
T Consensus 344 k~~qI~r~a~vdvpp~~R~~iW~aLL~l~e~~~a------------~y~~IDk-~Ts~~tdrqievdiprchQyd~~lsS 410 (725)
T KOG1093|consen 344 KRLQILREAYVDVPPLYRGFIWAALLQLEENHTA------------FYTLIDK-GTSHSTDRQIEVDIPRCHQYDELLSS 410 (725)
T ss_pred HHHHHHHHhccCCChhHhHHHHHHHhcCccccch------------hhhhhhc-CCCCcchhhhhcccchhhhcccccCC
Confidence 3445556667789999999999999998875432 4456777 56778899999999999987666665
Q ss_pred ChhhHHHHHHHHHHHHhhcCCCCcccchHHHHHHHHhhc-CChhHHHHHHHHHHHHhhhhhccC-CchhhhhhHHHHHHH
Q psy3328 84 SLEHQQQLSRILKVFALDEKNIGYCQGLNYIAALILLVT-KHEENTYWIFRSVINKYFSDYYTK-TLTGVVRDIDVLSEL 161 (337)
Q Consensus 84 ~~~~~~~L~~iL~~~~~~~~~i~Y~QG~~~i~~~ll~~~-~~e~~af~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~l 161 (337)
+.+.+.|+|+|.||+..+|...|.||+..+++||+... .+|.-||.|+..++-+|+++||.. +..-+...+..|.++
T Consensus 411 -p~~~r~lrRvLkawv~~s~~fvywqgldsLa~PFl~ln~Nne~laF~~~~~fi~kycq~fflkdns~vikeyLs~f~~l 489 (725)
T KOG1093|consen 411 -PKGHRKLRRVLKAWVTWSPIFVYWQGLDSLAAPFLYLNFNNELLAFACIATFIPKYCQHFFLKDNSNVIKEYLSMFSQL 489 (725)
T ss_pred -HHHHHHHHHHHHHHHhcCcceeecCCChhhhhhHHHHhcCchHHHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHH
Confidence 67899999999999999999999999999999998864 589999999999999999988877 566677889999999
Q ss_pred HHhhChhhhhhhhhcCCCcchhhhHhHHHhcccCCChhhHHHHHHHHhhcCChHHHHHHHHHHHHcHHHHhCCCCHHHHH
Q psy3328 162 VKIKMPHLYDHISKVGVPWPVIATKWFICMFADVLPVETVLRIWDCLFVEGPKILFRVSLTLIKLHERALLECEDFTTLV 241 (337)
Q Consensus 162 l~~~~P~L~~hl~~~~i~~~~~~~~W~~tlFs~~l~~~~~~~iwD~~l~~g~~~l~~~~lail~~~~~~il~~~~~~~i~ 241 (337)
+..|||+|++||...|+.++.|+++||.|+|++++|+..++.+||..+..++.|.+++++|++++.|+.++++ ++.|.+
T Consensus 490 ~AfhDpeL~qHl~~~~f~~eLyAiPwflT~Fshvlpl~kil~LwD~lml~~~SFplmi~vAil~~lR~~LLa~-nfne~i 568 (725)
T KOG1093|consen 490 LAFHDPELLQHLIDIGFIPELYAIPWFLTMFSHVLPLHKILHLWDNLMLGHSSFPLMIGVAILIQLRDPLLAC-NFNECI 568 (725)
T ss_pred HHhcCHHHHHHHHHcCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHhcCCCccHHHHHHHHHHHhhhhhhhC-Cchhhe
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999997 999999
Q ss_pred HHHHcCCCCCcccccchhhhhHHHHHHHHH
Q psy3328 242 ECFKSMVRSPAVLNCHSFMSGLNYIAALIL 271 (337)
Q Consensus 242 ~~l~~~~~~~~~~d~~~~i~~a~~~~~~~~ 271 (337)
.+|.+.|+ +|++..|++.+++.+..+
T Consensus 569 llf~d~pd----ldId~~Ires~~l~e~tP 594 (725)
T KOG1093|consen 569 LLFSDLPD----LDIDVCIRESYHLMETTP 594 (725)
T ss_pred eeeccCCc----ccHHHHHHHHhhhhhCCC
Confidence 99999984 899999999999887553
No 10
>KOG4347|consensus
Probab=100.00 E-value=5.1e-33 Score=260.39 Aligned_cols=233 Identities=27% Similarity=0.538 Sum_probs=216.5
Q ss_pred hhHHHHHHhhcCCCCchHHHHHHHHhcChHhhhhhhhcccCCChhHHHHHHhcC-CCCcccHHHHHhccCccCCCCcccc
Q psy3328 4 KKKKKKEEAEIKHTSTFDFSIWMIISEADTLKKVTHQTRHYGTGGYYAFMLNNK-ILDPDIGETIRTDLPRTFPENIFFR 82 (337)
Q Consensus 4 ~~~klk~~~~~GiP~~~R~~vW~~llg~~~~~~~~~~~~~~~~~~~y~~ll~~~-~~~~~~~~~I~~Dv~Rt~~~~~~f~ 82 (337)
...+++++++.|+|++.|+.+|..+.|.-..... +++.|.++++.. .......+.|++|+.|..|.++-|+
T Consensus 191 qt~~~~Klv~~gipe~~rgeiW~l~sGav~~~l~--------~~Geygkll~~~~G~~~~a~eEIE~Dl~rsLpEhpA~Q 262 (671)
T KOG4347|consen 191 QTILLRKLLYNGFPEDPRGEIWYLASGAVASLLL--------NPGEYGKLLHSVTGKRSVATEEIEPDLGRSLPEHPAFQ 262 (671)
T ss_pred HHHHHHHHHHHhcCCChHHHHHHhhhHHHHHhhc--------CcHHhhhhhhcccCCcccccccccCCCCCCCCcchhhh
Confidence 3567889999999999999999999998887777 899999999885 3456788999999999999999999
Q ss_pred CChhhHHHHHHHHHHHHhhcCCCCcccchHHHHHHHHhhcCChhHHHHHHHHHHHHhhhhhccCCchhhhhhHHHHHHHH
Q psy3328 83 NSLEHQQQLSRILKVFALDEKNIGYCQGLNYIAALILLVTKHEENTYWIFRSVINKYFSDYYTKTLTGVVRDIDVLSELV 162 (337)
Q Consensus 83 ~~~~~~~~L~~iL~~~~~~~~~i~Y~QG~~~i~~~ll~~~~~e~~af~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ll 162 (337)
. ..+...|+|||.||++.||+|||||-||-+++.++.++ .|++|||+++.+.+.++|+|+.....|......+|+.++
T Consensus 263 ~-e~gi~aLR~vL~Aya~~Np~vGYcQaMNIV~s~lll~~-~EEeafwll~~lce~~ip~yys~~vvGtliDQ~vfe~lv 340 (671)
T KOG4347|consen 263 S-EPGIAALRRVLTAYAWSNPEVGYCQAMNIVGSELLLFC-KEEEAFWLLSKLCEIYIPDYYSKTVVGTLIDQSVFEELV 340 (671)
T ss_pred C-CCchhhHHHHHHhhhccCCchhHHHHHHHHHHhhhhhh-ccchHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHH
Confidence 8 56788999999999999999999999999999999998 899999999999999999999999999999999999999
Q ss_pred HhhChhhhhhhhhcCCCcchhhhHhHHHhcccCCChhhHHHHHHHHhhcCChHHHHHHHHHHHHcHHHHhCCCCHHHHHH
Q psy3328 163 KIKMPHLYDHISKVGVPWPVIATKWFICMFADVLPVETVLRIWDCLFVEGPKILFRVSLTLIKLHERALLECEDFTTLVE 242 (337)
Q Consensus 163 ~~~~P~L~~hl~~~~i~~~~~~~~W~~tlFs~~l~~~~~~~iwD~~l~~g~~~l~~~~lail~~~~~~il~~~~~~~i~~ 242 (337)
+.+.|.++.|+...| ...+...+||+|+|....|++..++|.|+||.+|++++|-+++||+..+.+.|++++|-.+.+.
T Consensus 341 e~~lP~l~~~~~~l~-~l~~Vsl~WFlslFls~m~le~a~~ilD~FF~eG~rvlFqiaLail~~N~~~il~~~dDge~~~ 419 (671)
T KOG4347|consen 341 EDTLPVLGEHLAVLG-QLSTVSLSWFLSLFLSLMPLEYAVRILDCFFYEGPRVLFQIALAILKQNAERILSATDDGEAMM 419 (671)
T ss_pred HHhhhHHHHHhhhhc-ccceEeeHHHHHHHHHHcchHHHHHHHhhhhhcccHHHHHHHHHHHHhhHHHhcccCCchHHHH
Confidence 999999999999999 6678999999999999999999999999999999999999999999999999999988888886
Q ss_pred HHHcC
Q psy3328 243 CFKSM 247 (337)
Q Consensus 243 ~l~~~ 247 (337)
.+.+.
T Consensus 420 vl~~y 424 (671)
T KOG4347|consen 420 VLGNY 424 (671)
T ss_pred HHHHH
Confidence 66644
No 11
>KOG3636|consensus
Probab=99.97 E-value=3.4e-31 Score=237.59 Aligned_cols=258 Identities=14% Similarity=0.223 Sum_probs=221.9
Q ss_pred HHHHHHhcChHhhhhhhhcccCCChhHHHHHHhcCCCCcccHHHHHhccCccCCCCccccCChh-hHHHHHHHHHHHHhh
Q psy3328 23 SIWMIISEADTLKKVTHQTRHYGTGGYYAFMLNNKILDPDIGETIRTDLPRTFPENIFFRNSLE-HQQQLSRILKVFALD 101 (337)
Q Consensus 23 ~vW~~llg~~~~~~~~~~~~~~~~~~~y~~ll~~~~~~~~~~~~I~~Dv~Rt~~~~~~f~~~~~-~~~~L~~iL~~~~~~ 101 (337)
..|+++||+..+... ...|+++.+. +.+.++++|+.|.......-++... ....|+.+++.||+
T Consensus 40 ~~W~~~L~V~~K~d~---------l~~wd~iydL-----p~Q~~lr~DC~~~~d~l~n~ee~~v~vv~dlES~iTfYCK- 104 (669)
T KOG3636|consen 40 SDWMRLLGVSMKPNP---------LDDWDQIYDL-----PNQCALRNDCRKLADGLKNKEEDKVPVVSDLESFITFYCK- 104 (669)
T ss_pred HHHHHHhcccCCCCc---------hhhHHHHhCC-----chhhHHHHHHHHHHhhcCCchhhccchhHhhhhHhhhhhh-
Confidence 349999999988776 6788888888 7899999999988765443333212 26689999999998
Q ss_pred cCCCCccc--chHHHHHHHHhhcCChhHHHHHHHHHHHHhhh-hhccCCchhhhhhHHHHHHHHHhhChhhhhhhhhcCC
Q psy3328 102 EKNIGYCQ--GLNYIAALILLVTKHEENTYWIFRSVINKYFS-DYYTKTLTGVVRDIDVLSELVKIKMPHLYDHISKVGV 178 (337)
Q Consensus 102 ~~~i~Y~Q--G~~~i~~~ll~~~~~e~~af~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~ll~~~~P~L~~hl~~~~i 178 (337)
+.++.|.. ||..++-|+++...+.++.|++|.+++++|+| ++-.++.+ ++.|+.+|++|+|+|++||++..+
T Consensus 105 ~Rn~~Y~~d~gWi~lL~pl~~L~lprsd~fN~F~ai~~kYIPkdcrpkg~~-----Fh~FRLLlqYHdPelc~~Ldtkki 179 (669)
T KOG3636|consen 105 KRNMDYIKDIGWITLLEPLLLLNLPRSDEFNVFFAITTKYIPKDCRPKGQI-----FHLFRLLLQYHDPELCNHLDTKKI 179 (669)
T ss_pred ccCCcccccccHHHHHHHHHHhcCCcchhhhhhHhhhhcccCCCCCCCCcc-----chHHHHHHHhcCHHHhhhhhcccc
Confidence 78899998 99999999999988999999999999999988 77766666 899999999999999999999999
Q ss_pred CcchhhhHhHHHhcccCCChhhHHHHHHHHhhcCCh-HHHHHHHHHHHHcHHHHhCC--CCHHHHHHHHHcCCCCCcccc
Q psy3328 179 PWPVIATKWFICMFADVLPVETVLRIWDCLFVEGPK-ILFRVSLTLIKLHERALLEC--EDFTTLVECFKSMVRSPAVLN 255 (337)
Q Consensus 179 ~~~~~~~~W~~tlFs~~l~~~~~~~iwD~~l~~g~~-~l~~~~lail~~~~~~il~~--~~~~~i~~~l~~~~~~~~~~d 255 (337)
+|++|+..||.++|+...+.+.+..+||.|+..+++ ++||+++.||++.|++|++. ++.++++++|.++|......|
T Consensus 180 tPd~Y~lnWf~sLFas~~Stev~~a~WdlY~qqaDPF~vffLaliiLiNake~ILq~~sdsKEe~ikfLenmp~~L~~eD 259 (669)
T KOG3636|consen 180 TPDMYTLNWFASLFASSMSTEVCHALWDLYIQQADPFLVFFLALIILINAKEEILQVKSDSKEEAIKFLENMPAQLSVED 259 (669)
T ss_pred CchHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCceehHHHHHHHhcccHHHHhhhccccHHHHHHHHHcCchhccccc
Confidence 999999999999999999999999999999999999 68899999999999999976 578999999999999989999
Q ss_pred cchhhhhHHHHHHHHHHhhhccchhHHHHHHHHhhhhhhhhchhhhhhhhhHHHHHHH
Q psy3328 256 CHSFMSGLNYIAALILLVTKHEENTYWIFRSVINKYFSDYYTKTLTGVVRDIDVLSEL 313 (337)
Q Consensus 256 ~~~~i~~a~~~~~~~~l~~k~~~~~y~~~~~~i~~~~~~~~~~~~~~l~~d~~~l~~l 313 (337)
+.+| +.++..+..+++ .++.+.+..-.||+.+-+.+.+..+++|-
T Consensus 260 vpDf----fsLAqyY~~KTP---------~sfrkD~~~~lfGn~~~~~~~~~~~~sqa 304 (669)
T KOG3636|consen 260 VPDF----FSLAQYYSDKTP---------ESFRKDFHYILFGNANFDEEVKEIQMSQA 304 (669)
T ss_pred chhH----HHHHHHHhhcCh---------HHhhhhhhHhhhcCCCccchhhhhHHhhh
Confidence 9999 666666655666 66667767777887777777776666653
No 12
>KOG4436|consensus
Probab=99.97 E-value=3.1e-29 Score=238.64 Aligned_cols=258 Identities=24% Similarity=0.459 Sum_probs=218.4
Q ss_pred hhHHHHHHhhcCCCCchHHHHHHHHhcChHhhhhhhhcccCC--ChhHHHHHHhcCCCCcccHHHHHhccCccCCCCccc
Q psy3328 4 KKKKKKEEAEIKHTSTFDFSIWMIISEADTLKKVTHQTRHYG--TGGYYAFMLNNKILDPDIGETIRTDLPRTFPENIFF 81 (337)
Q Consensus 4 ~~~klk~~~~~GiP~~~R~~vW~~llg~~~~~~~~~~~~~~~--~~~~y~~ll~~~~~~~~~~~~I~~Dv~Rt~~~~~~f 81 (337)
..+++--+++.|||...|+.+|..+.--.... +.....+ ..-.|..++.. -.+.++.|..|+-||||++++|
T Consensus 566 d~ed~~~~l~~gvprsrrgeiwtflA~q~~~~---~~l~~~kr~~~~p~~~llkq---Lte~qhAi~idlgrtfp~h~~~ 639 (948)
T KOG4436|consen 566 DMEDLHSALRTGVPRSRRGEIWTFLAEQHSLN---HALPDKKRPPDFPYKELLKQ---LTEQQHAILIDLGRTFPTHPYF 639 (948)
T ss_pred cHHHHHHHHHccCchhhhHHHHHHHHHHHHHh---ccCCcccCCCCCChHHHHHH---HHHHHHHHHHhhccccCCCHHH
Confidence 45667778899999999999999986322221 1221111 12235566655 2345788999999999999999
Q ss_pred cCCh-hhHHHHHHHHHHHHhhcCCCCcccchHHHHHHHHhhcCChhHHHHHHHHHHHHh-hhhhccCCchhhhhhHHHHH
Q psy3328 82 RNSL-EHQQQLSRILKVFALDEKNIGYCQGLNYIAALILLVTKHEENTYWIFRSVINKY-FSDYYTKTLTGVVRDIDVLS 159 (337)
Q Consensus 82 ~~~~-~~~~~L~~iL~~~~~~~~~i~Y~QG~~~i~~~ll~~~~~e~~af~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~ 159 (337)
...- .++.++.++|.+|+..+|++|||||..++|++||+.+ +|+.||.++..+|... ++.-+.+++..++..+..+.
T Consensus 640 ~~qlg~gqlsl~n~Lkayslld~e~gycqg~~fv~gvlllh~-~e~~afellk~LM~~r~~r~qy~pdm~~lq~qmyqLs 718 (948)
T KOG4436|consen 640 SDQLGLGQLSLFNLLKAYSLLDPEVGYCQGLSFVAGVLLLHM-SEENAFELLKFLMFDRGMRKQYRPDMKKLQIQMYQLS 718 (948)
T ss_pred HhhccccHHHHHHHHHHhcccCccccccCcchhhhhhhHhhc-chhhHHHHHHHHHHHHhhHhhhchHHHHHHHHHHHHH
Confidence 8622 2499999999999999999999999999999999999 9999999999999654 56667788999999999999
Q ss_pred HHHHhhChhhhhhhhhcCCCcchhhhHhHHHhcccCCChhhHHHHHHHHhhcCChHHHHHHHHHHHHcHHHHhCCCCHHH
Q psy3328 160 ELVKIKMPHLYDHISKVGVPWPVIATKWFICMFADVLPVETVLRIWDCLFVEGPKILFRVSLTLIKLHERALLECEDFTT 239 (337)
Q Consensus 160 ~ll~~~~P~L~~hl~~~~i~~~~~~~~W~~tlFs~~l~~~~~~~iwD~~l~~g~~~l~~~~lail~~~~~~il~~~~~~~ 239 (337)
++++.++|.||+|++.+.|.|+.|+.+||+|+|+..+|+.-+.|++|.+|..|..++|.++++++...+..|++++++++
T Consensus 719 rl~hd~hrdlyn~le~~ei~pslyAapw~lt~fasQf~lGfvarvfd~~flq~tevifK~a~~llsv~k~~l~e~dn~e~ 798 (948)
T KOG4436|consen 719 RLLHDYHRDLYNHLEENEISPSLYAAPWFLTVFASQFPLGFVARVFDLIFLQGTEVIFKVALSLLSVHKQLLLEKDNFEE 798 (948)
T ss_pred HHHHHHhHHHHHHHHhcccChHHhhhHHHHHHHHhhCcchHHHHHHHHHHhhccchhhhhHHHHHHhhHHHHHhhhhHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCcccccchhhhhHHHHHH
Q psy3328 240 LVECFKSMVRSPAVLNCHSFMSGLNYIAA 268 (337)
Q Consensus 240 i~~~l~~~~~~~~~~d~~~~i~~a~~~~~ 268 (337)
|.++++++-.........++|..++++-.
T Consensus 799 i~d~~k~~~p~~~~~emeki~~qvf~mDi 827 (948)
T KOG4436|consen 799 IVDFLKTTLPKMEHTEMEKIIKQVFEMDI 827 (948)
T ss_pred HHHHHHHhhhhhhHHHHHHHHHHHHhhhH
Confidence 99999988776655666677777766443
No 13
>KOG2595|consensus
Probab=99.96 E-value=3.2e-28 Score=212.26 Aligned_cols=232 Identities=18% Similarity=0.268 Sum_probs=194.2
Q ss_pred CCCchHHHHHHHHhcChHhhhhhhhcccCCChhHHHHHHhcCCCCcccHHHHHhccCccCCCCcc---ccCChhhHHHHH
Q psy3328 16 HTSTFDFSIWMIISEADTLKKVTHQTRHYGTGGYYAFMLNNKILDPDIGETIRTDLPRTFPENIF---FRNSLEHQQQLS 92 (337)
Q Consensus 16 iP~~~R~~vW~~llg~~~~~~~~~~~~~~~~~~~y~~ll~~~~~~~~~~~~I~~Dv~Rt~~~~~~---f~~~~~~~~~L~ 92 (337)
+.+++|+.+|+.|+|+.-.... ...+....+ .++.++|+..|++|++...+- +..+..-++.|.
T Consensus 62 v~dslRk~vWp~L~~~~~n~~~---------~~~~~~~~q----~hkd~nQV~LDv~RSl~rfppg~p~~~R~~Lq~qL~ 128 (395)
T KOG2595|consen 62 VNDSLRKDVWPELLALNINHLD---------ATSTLTPVQ----KHKDYNQVILDVERSLGRFPPGIPKELRLQLQKQLT 128 (395)
T ss_pred ccHHHHHHHHHHHhccccCCCc---------ccccCChhh----hCcccceEEEehhhhhccCCCCCCHHHHHHHHHHHH
Confidence 6889999999999997654433 222222222 346789999999999855331 111112377788
Q ss_pred HHHHHHHhhcCCCCcccchHHHHHHHHhhcCChhHHHHHHHHHHHHhhhhhccCCchhhhhhHHHHHHHHHhhChhhhhh
Q psy3328 93 RILKVFALDEKNIGYCQGLNYIAALILLVTKHEENTYWIFRSVINKYFSDYYTKTLTGVVRDIDVLSELVKIKMPHLYDH 172 (337)
Q Consensus 93 ~iL~~~~~~~~~i~Y~QG~~~i~~~ll~~~~~e~~af~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~P~L~~h 172 (337)
.++......+|+..|.||+|+||..|++++ +|.+|+.+++.+...++++|+.+...+..+.+..+..+++..+|+||+.
T Consensus 129 ~LI~rVl~~yP~L~YYQGyHDI~~tfLLv~-gE~~Al~l~E~L~~~~lrdfM~~Tld~t~~qL~~i~~iIk~~nP~Ly~~ 207 (395)
T KOG2595|consen 129 ELILRVLRKYPTLNYYQGYHDIVVTFLLVV-GELEALSLMEELSTLHLRDFMLPTLDFTVRQLRLISPIIKEVNPELYQF 207 (395)
T ss_pred HHHHHHHHHCCCcchhcchhHHHHHHHHhh-hhHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChHHHHH
Confidence 888888888999999999999999999999 8999999999999888999999999999999999999999999999999
Q ss_pred hhhcCCCcchhhhHhHHHhcccCC-ChhhHHHHHHHHhhcCChHHHHHHHHHHHHcHHHHhCC-CCHHHHHHHHHcCCCC
Q psy3328 173 ISKVGVPWPVIATKWFICMFADVL-PVETVLRIWDCLFVEGPKILFRVSLTLIKLHERALLEC-EDFTTLVECFKSMVRS 250 (337)
Q Consensus 173 l~~~~i~~~~~~~~W~~tlFs~~l-~~~~~~~iwD~~l~~g~~~l~~~~lail~~~~~~il~~-~~~~~i~~~l~~~~~~ 250 (337)
|.+..+.+ +|+.+|++|||+|.+ ++..++|++|+|++..+-..+|++.+++...+++|+++ .|..-....++.+|++
T Consensus 208 l~~aevgt-lFaLsWllTWFaH~L~~~~~vvRlfD~Flas~pl~piyv~A~vvL~r~~eIl~~~~dms~~H~lLs~iPq~ 286 (395)
T KOG2595|consen 208 LQSAEVGT-LFALSWLLTWFAHNLKDIRIVVRLFDFFLASHPLLPIYVYAAVVLYRRSEILKCDCDMSLLHGLLSTIPQD 286 (395)
T ss_pred HHhhcccc-eehhhHHHHHHhhcchhHHHHHHHHHHHHhcCcchhHHHHHHHhhhhHHHHHHHHhhhHHHHHHHHhCccc
Confidence 99888886 799999999999998 89999999999999998899999999999999999987 3556667888888875
Q ss_pred CcccccchhhhhHHH
Q psy3328 251 PAVLNCHSFMSGLNY 265 (337)
Q Consensus 251 ~~~~d~~~~i~~a~~ 265 (337)
...+.+|+.+..
T Consensus 287 ---lp~d~lik~s~~ 298 (395)
T KOG2595|consen 287 ---LPYDTLIKESVL 298 (395)
T ss_pred ---cCHHHHHHHHHH
Confidence 666777776644
No 14
>KOG1091|consensus
Probab=99.95 E-value=2.8e-27 Score=218.36 Aligned_cols=249 Identities=21% Similarity=0.377 Sum_probs=187.6
Q ss_pred CCchHHHHHHHHhcChHhhhhhhhcccCCChhHHHHH------------------------HhcC--------CCCcccH
Q psy3328 17 TSTFDFSIWMIISEADTLKKVTHQTRHYGTGGYYAFM------------------------LNNK--------ILDPDIG 64 (337)
Q Consensus 17 P~~~R~~vW~~llg~~~~~~~~~~~~~~~~~~~y~~l------------------------l~~~--------~~~~~~~ 64 (337)
-.+.|+..|+.+||+.+....+|.....+.+..|... +++. ..+.+..
T Consensus 26 ~s~~Rgv~Wrl~L~vLp~~~ss~id~~~~~ra~~r~~r~~~L~dPh~~k~~~s~d~~idnPLSq~~~S~W~rfF~d~EL~ 105 (625)
T KOG1091|consen 26 FSNLRGVRWRLLLGVLPSENSSWIDNLRRLRANYRRLRRRLLIDPHNLKENHSPDLPIDNPLSQNPQSVWNRFFRDAELE 105 (625)
T ss_pred hhhhhhHHHHHhheecCCCchhHHHHHHHHhhhhhccccccccCccccccccCCCcccCCccccCCCchhhhhcCcHHHH
Confidence 4678999999999997766443322111112222211 1110 3455788
Q ss_pred HHHHhccCccCCCC-ccccCChhhHHHHHHHHHHHHhhcCCCCcccchHHHHHHHHhhcCC-------------------
Q psy3328 65 ETIRTDLPRTFPEN-IFFRNSLEHQQQLSRILKVFALDEKNIGYCQGLNYIAALILLVTKH------------------- 124 (337)
Q Consensus 65 ~~I~~Dv~Rt~~~~-~~f~~~~~~~~~L~~iL~~~~~~~~~i~Y~QG~~~i~~~ll~~~~~------------------- 124 (337)
+.|+.|+.||||++ .+|+. +..+..|++||..||..+|.++|.||||++.||++++...
T Consensus 106 ~~i~qDvsRtfPe~~~fFqs-~~~q~mLr~iLl~~~lehp~i~YrQGMHElLAPl~fVl~~D~q~l~h~se~~~~~l~f~ 184 (625)
T KOG1091|consen 106 KTIDQDVSRTFPEHSLFFQS-PEVQGMLRRILLLYALEHPEIGYRQGMHELLAPLLFVLHVDNQALLHVSESLFDKLGFE 184 (625)
T ss_pred HhhcchhhccCcchhhhhcC-chhhHHHHHHHHHHHhhchhhhHHhhhhhhhhhhhhheehhHHHHHHHHHhhhhhcCcc
Confidence 99999999999999 55555 6679999999999999999999999999999999988532
Q ss_pred -----------hhHHH--HHHHHHHHHh-----------hh------------hhccCCchhhhhhHHHHHHHHHhhChh
Q psy3328 125 -----------EENTY--WIFRSVINKY-----------FS------------DYYTKTLTGVVRDIDVLSELVKIKMPH 168 (337)
Q Consensus 125 -----------e~~af--~~~~~l~~~~-----------~~------------~~~~~~~~~~~~~~~~~~~ll~~~~P~ 168 (337)
+.+++ .++..+|..- .+ +-+.+..+.+......+.+++.++|+.
T Consensus 185 E~d~iy~~~y~k~d~dn~~lqs~lmls~~~~~e~e~g~~~~e~~ie~day~~~d~l~~~l~~v~e~~~~~~~lL~~~D~~ 264 (625)
T KOG1091|consen 185 ERDVIYNFLYLKTDLDNTELQSVLMLSDEYGYEEELGIVLSEKLIEHDAYVMFDALMPGLPPVFEANFAQYHLLAKVDKS 264 (625)
T ss_pred hhhhhhhHHHHhhhccchhHHHHHHhhhccccccCcceecCcccCCcCcccchhhhcccchhHHHHhhhhhhhhhhccHH
Confidence 12223 2444444320 00 111223344555567788999999999
Q ss_pred hhhhhhhcCCCcchhhhHhHHHhcccCCChhhHHHHHH-HHhhcCCh--HHHHHHHHHHHHcHHHHhCCCCHHHHHHHHH
Q psy3328 169 LYDHISKVGVPWPVIATKWFICMFADVLPVETVLRIWD-CLFVEGPK--ILFRVSLTLIKLHERALLECEDFTTLVECFK 245 (337)
Q Consensus 169 L~~hl~~~~i~~~~~~~~W~~tlFs~~l~~~~~~~iwD-~~l~~g~~--~l~~~~lail~~~~~~il~~~~~~~i~~~l~ 245 (337)
|+.||.+.||+|+.|..+|++.+|.++||+.+++.+|| +.++.++. ++-++.++|+.+.|+.++.. +....++.+-
T Consensus 265 Lh~HL~~l~i~pqifgiRWlRlLFGREfpL~dLLiVWD~~l~~d~pr~~Lv~~m~VsmLL~IRd~Llss-~~~tcL~~Lm 343 (625)
T KOG1091|consen 265 LHSHLVELGIEPQIFGIRWLRLLFGREFPLQDLLIVWDHVLIFDSPRGILVACMFVSMLLYIRDSLLSS-EYQTCLQYLM 343 (625)
T ss_pred HHHHHHhcCCchHHHHHHHHHHHHcchhHHHHHHHHhhhhhhccCchHHHHHHHHHHHHHHHHHHHHHh-cchhHHHHHh
Confidence 99999999999999999999999999999999999999 77777776 67899999999999999986 4555777777
Q ss_pred cCCCCCcccccchhhhhHHHHHHHH
Q psy3328 246 SMVRSPAVLNCHSFMSGLNYIAALI 270 (337)
Q Consensus 246 ~~~~~~~~~d~~~~i~~a~~~~~~~ 270 (337)
++|. .+|++.||+.|..+..+.
T Consensus 344 ~yP~---~~Dv~~~iekAl~l~~~~ 365 (625)
T KOG1091|consen 344 NYPE---IIDVDKFIEKALHLQKLF 365 (625)
T ss_pred cCCC---cCcHHHHHHHHHHHHHhc
Confidence 7765 499999999999988644
No 15
>KOG2221|consensus
Probab=99.94 E-value=3e-27 Score=194.22 Aligned_cols=178 Identities=28% Similarity=0.447 Sum_probs=168.3
Q ss_pred CchhhHHHHHHhhcCCCCchHHHHHHHHhcChHhhhhhhhcccCCChhHHHHHHhcCCCCcccHHHHHhccCccCCCCcc
Q psy3328 1 MYKKKKKKKEEAEIKHTSTFDFSIWMIISEADTLKKVTHQTRHYGTGGYYAFMLNNKILDPDIGETIRTDLPRTFPENIF 80 (337)
Q Consensus 1 ~~~~~~klk~~~~~GiP~~~R~~vW~~llg~~~~~~~~~~~~~~~~~~~y~~ll~~~~~~~~~~~~I~~Dv~Rt~~~~~~ 80 (337)
|-|++++++..|+.|||+.+|+..|+.+.|.+..... |+..|+.+... ..++...+.|++|++|.||.+..
T Consensus 89 m~kk~~~ir~rcrkgippslr~Raw~ylsGa~~~~~~--------np~~~~~~~~~-pG~p~t~e~i~kdl~rqfp~hem 159 (267)
T KOG2221|consen 89 MRKKQKKIRPRCRKGIPPSLRGRAWRYLSGAPSPPPK--------NPVVFDELGPA-PGDPKTAEGIHKDLHRQFPFHEM 159 (267)
T ss_pred HHhccccccchhhcCCCcccchhHHHhhcCCCCCCCC--------CcchhhhccCC-CCCCcchhhhccccccCCCcccc
Confidence 6689999999999999999999999999999888776 89999999888 88889999999999999999999
Q ss_pred ccCChh-hHHHHHHHHHHHHhhcCCCCcccchHHHHHHHHhhcCChhHHHHHHHHHHHHhhhhhccCCchhhhhhHHHHH
Q psy3328 81 FRNSLE-HQQQLSRILKVFALDEKNIGYCQGLNYIAALILLVTKHEENTYWIFRSVINKYFSDYYTKTLTGVVRDIDVLS 159 (337)
Q Consensus 81 f~~~~~-~~~~L~~iL~~~~~~~~~i~Y~QG~~~i~~~ll~~~~~e~~af~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 159 (337)
|-.... ++..|.|+|.+|..++|+.||||+-..|++.++..+ ++++|||||+.+...++++|+.++...++.+-.++.
T Consensus 160 f~s~~k~gkqelfr~lka~ti~~pe~g~cq~qapiaa~llmhm-p~rdaf~~~vqicekylqgy~~sgleaiq~dg~il~ 238 (267)
T KOG2221|consen 160 FGSSGKTGKQELFRVLKAYTIYKPEEGYCQAQAPIAAVLLMHM-PARDAFWCFVQICEKYLQGYYSSGLEAIQNDGGILE 238 (267)
T ss_pred cccccccchHHHHHHHHHHHHhCchhhhhhhhchHHHHHHhcc-cHHHHHHHHHHHHHHHcccccccchhhhhcccHHHH
Confidence 987443 389999999999999999999999999999999999 899999999999999999999999999999999999
Q ss_pred HHHHhhChhhhhhhhhcCCCcchhhhHhH
Q psy3328 160 ELVKIKMPHLYDHISKVGVPWPVIATKWF 188 (337)
Q Consensus 160 ~ll~~~~P~L~~hl~~~~i~~~~~~~~W~ 188 (337)
.|+++.+|..|.|+...+++|..|...||
T Consensus 239 ~Llkk~~~p~~rH~~~~kvdp~lym~ewF 267 (267)
T KOG2221|consen 239 GLLKKASPPPYRHLGGDKVDPLLYMTEWF 267 (267)
T ss_pred HHHHhcCCCCCcccccCCCCHHHhhhccC
Confidence 99999999999999999999999999997
No 16
>KOG1102|consensus
Probab=99.94 E-value=2.1e-26 Score=214.87 Aligned_cols=236 Identities=32% Similarity=0.587 Sum_probs=202.1
Q ss_pred hhhHHHHHHhhcCCCCchHHHHHHHHhcChHhhhhhhhcccCCChhHHHHHHhcCCCCcccHHHHHhccCccCCCCcccc
Q psy3328 3 KKKKKKKEEAEIKHTSTFDFSIWMIISEADTLKKVTHQTRHYGTGGYYAFMLNNKILDPDIGETIRTDLPRTFPENIFFR 82 (337)
Q Consensus 3 ~~~~klk~~~~~GiP~~~R~~vW~~llg~~~~~~~~~~~~~~~~~~~y~~ll~~~~~~~~~~~~I~~Dv~Rt~~~~~~f~ 82 (337)
++..++......|||.++|+.+|..+++....... ......|...... ......++| .|+.||++.+..|.
T Consensus 133 ~~~~~l~~~~~~gip~~~r~~~W~l~~~~~~~~~~------~~~~~l~~~~~~~--~~~~~~~~~-~d~~Rt~~~~~~f~ 203 (397)
T KOG1102|consen 133 RRPLKLSRRVLVGIPDELRGLVWQLLLYAVEESLF------DSLDELYRLQLDE--PEPHESEII-RDLSRTFPAHLLFR 203 (397)
T ss_pred ccHHHHHHHhhccccHHHHHHHHHHhcccHhhhhh------hhHHHHHHHhhcc--CCCchhHHH-hhccCcCcchhhhh
Confidence 45678888889999999999999999987332222 0011223332322 334445666 99999999998888
Q ss_pred CCh-hhHHHHHHHHHHHHhhcCCCCcccchHHHHHHHHhhcCChhHHHHHHHHHHHHhhhhhccCCchhhhhhHHHHHHH
Q psy3328 83 NSL-EHQQQLSRILKVFALDEKNIGYCQGLNYIAALILLVTKHEENTYWIFRSVINKYFSDYYTKTLTGVVRDIDVLSEL 161 (337)
Q Consensus 83 ~~~-~~~~~L~~iL~~~~~~~~~i~Y~QG~~~i~~~ll~~~~~e~~af~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l 161 (337)
... .+++++.+|+.+|+.++|++||||||..++++++.++ +|++||++++.+|..+..+.+..+.++++..+..+..+
T Consensus 204 ~~~~~~q~sl~~vl~a~s~~~~~~gy~q~m~~~a~~ll~~~-~ee~af~~lv~l~~~~~~~~~~~~~~~l~~~~~~~~~l 282 (397)
T KOG1102|consen 204 KRYGVGQRSLYNVLKAYSLYDPEVGYCQGMSSIAAPLLLYL-PEEEAFPLLVKLMKNYGLDLLSPGFSGLQRSFRQLQRL 282 (397)
T ss_pred hhcCcccccccccchhhcccCCCcccccchhhHhhhhhccC-chhhhhhhhhhhhhccchhcccccCCchhhhHHHHHHH
Confidence 733 3489999999999999999999999999999999999 69999999999998765555588999999999999999
Q ss_pred HHhhChhhhhhhhhcCCCcchhhhHhHHHhcccCCChhhHHHHHHHHhhcCChHHHHHHHHHHHHcHHHHhCCCCHHHHH
Q psy3328 162 VKIKMPHLYDHISKVGVPWPVIATKWFICMFADVLPVETVLRIWDCLFVEGPKILFRVSLTLIKLHERALLECEDFTTLV 241 (337)
Q Consensus 162 l~~~~P~L~~hl~~~~i~~~~~~~~W~~tlFs~~l~~~~~~~iwD~~l~~g~~~l~~~~lail~~~~~~il~~~~~~~i~ 241 (337)
++...|.++.|+...++...+|+.+|++|+|+..+|++.+.++||.++.+|..+++.++++++....+.+++. +++.++
T Consensus 283 ~~~~~p~~~~~~~~~~~~~~~~~s~w~~t~f~~k~p~~~~~ri~d~~~~~g~~i~~~~~~~l~~~~~~~~~~~-~~e~~~ 361 (397)
T KOG1102|consen 283 LKELIPKLLDHLLPQGIELSMYASQWFLTLFAAKFPLELVLRIWDALFVEGVSILFRFSLALLKHKADDLLDL-DFESLL 361 (397)
T ss_pred HHHhChhhhhhccccccccceeccceeeEeeeccccHHHHHHHhHHHHHhchHHHHHHHHHHhhhhhHHHhhc-cHHHHH
Confidence 9999999999999999999999999999999999999999999999999998899999999999999999986 699999
Q ss_pred HHHHcCCC
Q psy3328 242 ECFKSMVR 249 (337)
Q Consensus 242 ~~l~~~~~ 249 (337)
+++.+.+.
T Consensus 362 ~~l~~~~~ 369 (397)
T KOG1102|consen 362 SYLRVDLP 369 (397)
T ss_pred HHHhcccH
Confidence 99986654
No 17
>KOG2224|consensus
Probab=99.91 E-value=2.4e-24 Score=193.15 Aligned_cols=257 Identities=17% Similarity=0.308 Sum_probs=187.6
Q ss_pred HHHHHhhcCCCCchHHHHHHHHhcChHhhhhhhhc--ccCCChhHHHHHHhcCCC-Cc----------ccHHHHHhccCc
Q psy3328 7 KKKEEAEIKHTSTFDFSIWMIISEADTLKKVTHQT--RHYGTGGYYAFMLNNKIL-DP----------DIGETIRTDLPR 73 (337)
Q Consensus 7 klk~~~~~GiP~~~R~~vW~~llg~~~~~~~~~~~--~~~~~~~~y~~ll~~~~~-~~----------~~~~~I~~Dv~R 73 (337)
..|.+.-+||-.++|+.||+.||..+.-....++. ...+.+..|+++-.+ .. .. ..+-.+++||-|
T Consensus 427 lrk~iffggid~sir~evwpfllk~ys~est~edr~al~~~krkey~eiqqk-rlysmspeeh~~fwknvq~tvdkdvvr 505 (781)
T KOG2224|consen 427 LRKAIFFGGIDKSIRGEVWPFLLKCYSFESTFEDRAALMDIKRKEYEEIQQK-RLYSMSPEEHIAFWKNVQFTVDKDVVR 505 (781)
T ss_pred hhhhheeccchhhhhcchhHHHHHHhccccchhHHHHHHHHHHHHHHHHHHH-HhhcCCHHHHHHHHhheEEEEecceee
Confidence 33445556899999999999999887655554332 244566777776555 22 11 123345799999
Q ss_pred cCCCCccccCChh-hHHHHHHHHHHHHhhcCCCCcccchHHHHHHHHhhcCChhHHHHHHHHHHHHh-------------
Q psy3328 74 TFPENIFFRNSLE-HQQQLSRILKVFALDEKNIGYCQGLNYIAALILLVTKHEENTYWIFRSVINKY------------- 139 (337)
Q Consensus 74 t~~~~~~f~~~~~-~~~~L~~iL~~~~~~~~~i~Y~QG~~~i~~~ll~~~~~e~~af~~~~~l~~~~------------- 139 (337)
|..++++|..++. +.+++++||..|+.|||.+||.|||+++++|.+.-..+|+++||||+.+|...
T Consensus 506 tdrnn~ff~gddnpn~e~mk~illn~avyn~~m~ysqgmsdllapvlcevqnesetfwcfvglmqgmsdlvapilaevld 585 (781)
T KOG2224|consen 506 TDRNNPFFCGDDNPNTESMKNILLNFAVYNPAMGYSQGMSDLLAPVLCEVQNESETFWCFVGLMQGMSDLVAPILAEVLD 585 (781)
T ss_pred ccCCCCcccCCCCCcHHHHHHHHHhheeecccccccccchhhcchhhhhhccccchhhhhhhhhccchhhhhhHHHhhhc
Confidence 9999999987443 48999999999999999999998888888888877777777777777777631
Q ss_pred -----------hh-hhcc--CCchhhhhhHHHHHHHHHhhChhhhhhhhhcCCCc--chhhhHhHHHhcccCCChhhHHH
Q psy3328 140 -----------FS-DYYT--KTLTGVVRDIDVLSELVKIKMPHLYDHISKVGVPW--PVIATKWFICMFADVLPVETVLR 203 (337)
Q Consensus 140 -----------~~-~~~~--~~~~~~~~~~~~~~~ll~~~~P~L~~hl~~~~i~~--~~~~~~W~~tlFs~~l~~~~~~~ 203 (337)
++ .+|. +....+...+--++.+++...|..|+||.++|-+. -+|+-+|++.+|.++||-..++|
T Consensus 586 esdtfwcfvglmqna~fv~sp~d~dmd~~l~ylreliri~~~~fykhl~q~~ed~lellfchrwlllcfkref~ea~air 665 (781)
T KOG2224|consen 586 ESDTFWCFVGLMQNAFFVCSPRDEDMDHNLLYLRELIRIMHPHFYKHLEQHGEDGLELLFCHRWLLLCFKREFPEAEAIR 665 (781)
T ss_pred cccchhhhhhhhcceEEEeCCcchhhhHhHHHHHHHHHHhhHHHHHHHHHhCcchhhHHHHHHHHHHHhhhcccHHHHHH
Confidence 11 2222 22233444567788999999999999999887433 45799999999999999999999
Q ss_pred HHHHHhhcCC--hHHHHHHHHHHHHcHHHHhCCC-CHHHHHHHHHcCCCCCcccccchhhhhHHHHH
Q psy3328 204 IWDCLFVEGP--KILFRVSLTLIKLHERALLECE-DFTTLVECFKSMVRSPAVLNCHSFMSGLNYIA 267 (337)
Q Consensus 204 iwD~~l~~g~--~~l~~~~lail~~~~~~il~~~-~~~~i~~~l~~~~~~~~~~d~~~~i~~a~~~~ 267 (337)
+|..-++.-. -|..|+|+||+-.+-+++++.+ -.++++--|.++-- .+|-+-++++|-.+-
T Consensus 666 iweacwa~y~tdyfhlficlaiiaiy~ddvi~q~l~~demllhf~nlam---~mdgelilrkar~ll 729 (781)
T KOG2224|consen 666 IWEACWAHYLTDYFHLFICLAIIAIYADDVIAQNLAPDEMLLHFGNLAM---HMDGELILRKARGLL 729 (781)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHhhhHHHHhhcCchhHHHhhhhhhh---hcCchhhHHHHHHHH
Confidence 9999988743 3899999999999999887652 34566555555432 256666666664443
No 18
>KOG2197|consensus
Probab=99.85 E-value=3.8e-21 Score=182.97 Aligned_cols=244 Identities=18% Similarity=0.325 Sum_probs=191.5
Q ss_pred HhhcCCCCchHHHHHHHHhcChHhhhhhhhc--ccCCChhHHHHHHhcC-----CC------CcccHHHHHhccCccCCC
Q psy3328 11 EAEIKHTSTFDFSIWMIISEADTLKKVTHQT--RHYGTGGYYAFMLNNK-----IL------DPDIGETIRTDLPRTFPE 77 (337)
Q Consensus 11 ~~~~GiP~~~R~~vW~~llg~~~~~~~~~~~--~~~~~~~~y~~ll~~~-----~~------~~~~~~~I~~Dv~Rt~~~ 77 (337)
....|+-+.+|+.+|+.+++.........+. .... ...|....... .. ..+....|.+|+.||.+.
T Consensus 173 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~k~qW~~~~~~~~~~~~~~~~~~~~i~~dv~rtDr~ 251 (488)
T KOG2197|consen 173 IFSGGLSKSLRAEVWKFLLDYSPWDSTTRERVSLRKL-TDEYFRLKLQWSSTSPEQSPESEGYLERKSRIEKDVGRTDRS 251 (488)
T ss_pred ecccccccchhhhhhhhhhcccCcccccccccccccc-cccHhhhhhhheeccccccccccchhhhhhhhhhhccccchh
Confidence 3344665599999999999987766653221 0111 22343333332 11 113347899999999998
Q ss_pred CccccCChh-hHHHHHHHHHHHHhhcCCCCcccchHHHHHHHHhhcCChhHHHHHHHHHHHHhhhhhccCCchhhhhhHH
Q psy3328 78 NIFFRNSLE-HQQQLSRILKVFALDEKNIGYCQGLNYIAALILLVTKHEENTYWIFRSVINKYFSDYYTKTLTGVVRDID 156 (337)
Q Consensus 78 ~~~f~~~~~-~~~~L~~iL~~~~~~~~~i~Y~QG~~~i~~~ll~~~~~e~~af~~~~~l~~~~~~~~~~~~~~~~~~~~~ 156 (337)
+.++..... ....|..||.+|+.+++++||||||++.++|++.++.+|.+|||||+.+|.+..++|. .+..+++..+.
T Consensus 252 ~~~~~~~~n~~~~~l~~iL~ty~~~~~d~GY~QgmSDllspi~~v~~de~~aFwcFv~fm~~~~~nF~-~d~~~~~~Ql~ 330 (488)
T KOG2197|consen 252 LEFYEGEENPHLARLVDILLTYAVYDFDLGYCQGMSDLLSPILIVMEDEVEAFWCFVGFMDRLRHNFR-IDQSGMQTQLA 330 (488)
T ss_pred hhhhhcccccCHHHHHHHHhhcccccCccccccCchhhcCcceeeecCchHHHHHHHHHHHHHhhcCc-cccccHHHHhh
Confidence 887775322 3889999999999999999999999999999999999999999999999999554554 56788888889
Q ss_pred HHHHHHHhhChhhhhhhhhcCCCcchhhhHhHHHhcccCCChhhHHHHHHHHhhcCCh--HHHHHHHHHHHHcHHHHhCC
Q psy3328 157 VLSELVKIKMPHLYDHISKVGVPWPVIATKWFICMFADVLPVETVLRIWDCLFVEGPK--ILFRVSLTLIKLHERALLEC 234 (337)
Q Consensus 157 ~~~~ll~~~~P~L~~hl~~~~i~~~~~~~~W~~tlFs~~l~~~~~~~iwD~~l~~g~~--~l~~~~lail~~~~~~il~~ 234 (337)
.+..+++..||.+++||+..+.....++.+|+..+|-+++..++++++|.++...-+. +.++++.|++....+.|+..
T Consensus 331 ~~~~li~~~dp~l~~hLe~~d~~~~~f~fr~l~v~frrEf~~ed~l~LWEvlw~~~~~~~f~~~~~~~~l~~~~~~l~~~ 410 (488)
T KOG2197|consen 331 QLSSLIQELDPRLYQHLEKLDAGDLFFCFRMLLVPFRREFEFEDSLRLWEVLWTDLPSPHFHLYVAPAILNKDPQTLMEQ 410 (488)
T ss_pred hhhhhccccCHHHHhhccccCCCccceeeehhhcccccccccccHHHHHHHHHhcCccchHHHHHHHhhhhcchHHHHhc
Confidence 9999999999999999999999999999999999999999999999999999998554 89999999999988888875
Q ss_pred -CCHHHHHHHHHcCCCCCcccccchh
Q psy3328 235 -EDFTTLVECFKSMVRSPAVLNCHSF 259 (337)
Q Consensus 235 -~~~~~i~~~l~~~~~~~~~~d~~~~ 259 (337)
.+..+++..+..... ..|....
T Consensus 411 ~~~~~e~l~~i~~~~~---~~d~~~~ 433 (488)
T KOG2197|consen 411 GKSFNEVLKHVNLLSE---KADVLWV 433 (488)
T ss_pred CccchhHHhhcccccc---cchhhhH
Confidence 344555555554433 2455544
No 19
>KOG4436|consensus
Probab=99.78 E-value=2.9e-18 Score=164.30 Aligned_cols=257 Identities=20% Similarity=0.245 Sum_probs=213.8
Q ss_pred hhhHHHHHHhhcCCCCchHHHHHHHHhcChHhhhhhhhcccCCChhHHHHHHhcC--CCCcccHHHHHhccCccCCCCcc
Q psy3328 3 KKKKKKKEEAEIKHTSTFDFSIWMIISEADTLKKVTHQTRHYGTGGYYAFMLNNK--ILDPDIGETIRTDLPRTFPENIF 80 (337)
Q Consensus 3 ~~~~klk~~~~~GiP~~~R~~vW~~llg~~~~~~~~~~~~~~~~~~~y~~ll~~~--~~~~~~~~~I~~Dv~Rt~~~~~~ 80 (337)
++..++++++++|+|...|..+|..++..+...... --..|.++...+ .........|..|++||.+.+.+
T Consensus 172 ~s~~~l~e~Ve~~~p~~frli~~qlLssatd~~q~~-------I~e~~sdl~~~s~~~Ek~~~~~~Irrdi~~~~~eh~~ 244 (948)
T KOG4436|consen 172 KSLHKLKELVEGGIPMHFRLIRWQLLSSATDREQAL-------IFEDYSDLAPCSSQQEKELHIGIIRRDIERTYPEHYF 244 (948)
T ss_pred hchhhhHHHHhcCCchHHHHHHHHHhcccccchhhH-------HHHHHHHHhhhcchhhhhHHHHHHHHHhhccCcceee
Confidence 466799999999999999999999999877655220 125677777663 12222445899999999999999
Q ss_pred ccCChhh--------HHHHHHHHHHHHhhcCCCCcccchHHHHHHHHhhcCChhHHHHHHHHHHHHh-hhhhccCCchhh
Q psy3328 81 FRNSLEH--------QQQLSRILKVFALDEKNIGYCQGLNYIAALILLVTKHEENTYWIFRSVINKY-FSDYYTKTLTGV 151 (337)
Q Consensus 81 f~~~~~~--------~~~L~~iL~~~~~~~~~i~Y~QG~~~i~~~ll~~~~~e~~af~~~~~l~~~~-~~~~~~~~~~~~ 151 (337)
|.+.+.. +..|.++..+|+...-+++||||-+.+++.+++.+ +++.+|..++.+|..+ ++..+.+....+
T Consensus 245 fke~~s~~~~~~~~~~d~LfN~~K~~~~~~~E~ifsqGs~~m~Gll~l~~-~~E~assv~~~lm~~~rl~~l~kpe~~~l 323 (948)
T KOG4436|consen 245 FKEQSSTVCSDIRFAQDQLFNVAKAYSTKDLEVIFSQGSAFMVGLLLLQM-PVEEASSVKVQLMILYRLRELSKPEMEPL 323 (948)
T ss_pred eccCccCCcchhHHHHHHHHHHHHHHhhhhhhhhhccchHHHHHHHHhcC-cHHHHHHHHHHHHHhhcccccCCcccchh
Confidence 9875544 88999999999999999999999999999999998 8999999999999887 778898888888
Q ss_pred hhhHHHHHHHHHhhCh-hhhhhhhhcCCCcchhhhHhHHHhcccCCChhhHHHHHHHHhhcCChHHHHHHHHHHHHcHHH
Q psy3328 152 VRDIDVLSELVKIKMP-HLYDHISKVGVPWPVIATKWFICMFADVLPVETVLRIWDCLFVEGPKILFRVSLTLIKLHERA 230 (337)
Q Consensus 152 ~~~~~~~~~ll~~~~P-~L~~hl~~~~i~~~~~~~~W~~tlFs~~l~~~~~~~iwD~~l~~g~~~l~~~~lail~~~~~~ 230 (337)
...+..++...+...| .++.|+.+.+++.++|...||++.|...+|++...++.|.+.++|-...|+..+|++.+.++.
T Consensus 324 ~~~~~q~e~~~q~~sp~dl~sH~~eq~~h~S~~~rs~flt~~ltt~Pi~~a~r~~~~f~~egllk~fr~~ia~~~~~~d~ 403 (948)
T KOG4436|consen 324 GLCMFQLECTNQDQSPMDLFSHFPEQHFHTSMYARSWFLTNFLTTFPIFMAARISDTFSSEGLLKRFRDSIAYLHQLRDI 403 (948)
T ss_pred HHHHHhhcccccccchhHHhhcccccCCCccHHHHHHHHHhhcccCchhhccccccccccccHHHHHhhhHHHHHHHhhh
Confidence 8888899999999999 999999999999999999999999999999999999999999999999999999999444444
Q ss_pred HhCCCCHHHHHHHHHcCCCCCcccccchhhhhHHHHH
Q psy3328 231 LLECEDFTTLVECFKSMVRSPAVLNCHSFMSGLNYIA 267 (337)
Q Consensus 231 il~~~~~~~i~~~l~~~~~~~~~~d~~~~i~~a~~~~ 267 (337)
=+...|+++....++........-+++.....+....
T Consensus 404 ~~~s~D~EG~~~~~qr~~s~~vggtp~k~~t~a~q~q 440 (948)
T KOG4436|consen 404 ELESLDMEGMLSYFQRNRSNTVGGTPDKLRTAAWQVQ 440 (948)
T ss_pred hhhccCccccccchhhccccccCCCCchHHHHHHHHh
Confidence 3334599998888875555444556666655554433
No 20
>KOG2801|consensus
Probab=99.39 E-value=3.4e-12 Score=110.53 Aligned_cols=247 Identities=15% Similarity=0.217 Sum_probs=175.4
Q ss_pred HHHHHHhhcCC---CCchHHHHHHHHhcChHhhhhhhhcccCCChhHHHHHHhcC-CCC-c---ccHHHHHhccCccCCC
Q psy3328 6 KKKKEEAEIKH---TSTFDFSIWMIISEADTLKKVTHQTRHYGTGGYYAFMLNNK-ILD-P---DIGETIRTDLPRTFPE 77 (337)
Q Consensus 6 ~klk~~~~~Gi---P~~~R~~vW~~llg~~~~~~~~~~~~~~~~~~~y~~ll~~~-~~~-~---~~~~~I~~Dv~Rt~~~ 77 (337)
.++|+++|.|- ...+|++|+..+..--+...- --..+.|.+++.+. ..+ + +..+-++. -..|+
T Consensus 33 qelkqlarqgywaqshalrgkvyqrlirdipcrtv------tpdasvysdivgkivgkhsssclplpefvdn---tqvps 103 (559)
T KOG2801|consen 33 QELKQLARQGYWAQSHALRGKVYQRLIRDIPCRTV------TPDASVYSDIVGKIVGKHSSSCLPLPEFVDN---TQVPS 103 (559)
T ss_pred HHHHHHHhcchHHhhhhhhhHHHHHHHhcCCcccc------CCchhHHHHHHHHHhccCCcccccchhhccc---CcCch
Confidence 46788999984 678999999999764332221 11346787776552 011 1 11111111 01111
Q ss_pred CccccCChhhHHHHHHHHHHHHhhcCCCCcccchHHHHHHHHhhcCChhHHHHHHHHHHHHh--hhhhccCCchhhhhhH
Q psy3328 78 NIFFRNSLEHQQQLSRILKVFALDEKNIGYCQGLNYIAALILLVTKHEENTYWIFRSVINKY--FSDYYTKTLTGVVRDI 155 (337)
Q Consensus 78 ~~~f~~~~~~~~~L~~iL~~~~~~~~~i~Y~QG~~~i~~~ll~~~~~e~~af~~~~~l~~~~--~~~~~~~~~~~~~~~~ 155 (337)
. . -+..+....+.||.+.+...|++++|+.++.++++++++..+|.++|.-.++++... -+....+++-.....+
T Consensus 104 y--c-lnargegavrkilKOGanqfpdisfcpalpavvalllhysideaecfekacrilacndpgrrlidqsflafessc 180 (559)
T KOG2801|consen 104 Y--C-LNARGEGAVRKILLCLANQFPDISFCPALPAVVALLLHYSIDEAECFEKACRILACNDPGRRLIDQSFLAFESSC 180 (559)
T ss_pred h--h-hcCcCchhHHHHHHHHhccCCCcccCcchHHHHHHHHHhcccHHHHHHHhheeeeecCcchhhhhhHHHHHHhhh
Confidence 1 1 112456678999999999999999999999999999999989999998877776432 2345555666666778
Q ss_pred HHHHHHHHhhChhhhhhhhhcCCCcchhhhHhHHHhcccCCChhhHHHHHHHHhhcCChHHHHHHHHHHHHcHHHH----
Q psy3328 156 DVLSELVKIKMPHLYDHISKVGVPWPVIATKWFICMFADVLPVETVLRIWDCLFVEGPKILFRVSLTLIKLHERAL---- 231 (337)
Q Consensus 156 ~~~~~ll~~~~P~L~~hl~~~~i~~~~~~~~W~~tlFs~~l~~~~~~~iwD~~l~~g~~~l~~~~lail~~~~~~i---- 231 (337)
..|..++.+++...++.+-...-+.-.....|-.++| +++|+-...|++|.|+.+|.++++++++||++.+.+.-
T Consensus 181 mtfgdlvnkycqaahklmvavsedvlqvyadwqrwlf-gelplcyfarvfdvflvegykvlyrvalailkffhkvragqp 259 (559)
T KOG2801|consen 181 MTFGDLVNKYCQAAHKLMVAVSEDVLQVYADWQRWLF-GELPLCYFARVFDVFLVEGYKVLYRVALAILKFFHKVRAGQP 259 (559)
T ss_pred hhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHh-ccchHHHHHHHhhheeecchHHHHHHHHHHHHHHHHhhcCCC
Confidence 8999999999999888875443333344567888888 46999999999999999999999999999999987742
Q ss_pred hCCCC-HHHHHHHHHcCCCCCcccccchhhhhHHHHHH
Q psy3328 232 LECED-FTTLVECFKSMVRSPAVLNCHSFMSGLNYIAA 268 (337)
Q Consensus 232 l~~~~-~~~i~~~l~~~~~~~~~~d~~~~i~~a~~~~~ 268 (337)
++.++ ..++-.+.+++-+. ..+++++.+|+.++-
T Consensus 260 lesdsvkqdirtfvrdiakt---vspekllekafairl 294 (559)
T KOG2801|consen 260 LESDSVKQDIRTFVRDIAKT---VSPEKLLEKAFAIRL 294 (559)
T ss_pred CccchHHHHHHHHHHHHHhh---CCHHHHHHHHHHHHH
Confidence 33333 25666677776553 677888888888764
No 21
>KOG1648|consensus
Probab=97.78 E-value=6e-07 Score=83.26 Aligned_cols=229 Identities=17% Similarity=0.240 Sum_probs=146.1
Q ss_pred HHHHHHhhcCCCCchHHHHHHHHhcChHhhhh--hhhcccCCChhHHHHHHhcCCCCcccHHHHHhccCccCCCCccccC
Q psy3328 6 KKKKEEAEIKHTSTFDFSIWMIISEADTLKKV--THQTRHYGTGGYYAFMLNNKILDPDIGETIRTDLPRTFPENIFFRN 83 (337)
Q Consensus 6 ~klk~~~~~GiP~~~R~~vW~~llg~~~~~~~--~~~~~~~~~~~~y~~ll~~~~~~~~~~~~I~~Dv~Rt~~~~~~f~~ 83 (337)
+-+....++|.-...|+..|+...+-...... ..+...-.....|+.-+-. ........|++|++|+-.+..+|.+
T Consensus 549 ~~l~~~~~g~~e~~~r~~~~p~~~~~~~~g~~~~~~d~~e~~~s~~y~~~l~~--~~~~~~~~~~kd~e~~~~~~~~fs~ 626 (813)
T KOG1648|consen 549 RVLEAEVRGRDEEAFRAARAPKAASPVREGSCDVFEDPNEPTCSQHYDRNLIT--LFRANLHRIDKDVERCDRNLMFFSN 626 (813)
T ss_pred HHHHHHHhcccHHHHhhcccccccccccccccchhcCCCccHHHHHHHHHHHH--HHhhheeeecchhhhCcchheeecC
Confidence 44566778889999999999999875443322 1111222234556554332 1122456788999999888888887
Q ss_pred ChhhHHHHHHHHHHHHhhcCCCCcccchHHHHHHHHhhcCChhHHHHHHHHHHHHhhhhhccCCchhhhhhHHHHHHHHH
Q psy3328 84 SLEHQQQLSRILKVFALDEKNIGYCQGLNYIAALILLVTKHEENTYWIFRSVINKYFSDYYTKTLTGVVRDIDVLSELVK 163 (337)
Q Consensus 84 ~~~~~~~L~~iL~~~~~~~~~i~Y~QG~~~i~~~ll~~~~~e~~af~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 163 (337)
. ++.++ +++...|...+-+-||.|||.++.+|++..+.+|.-+-.|+.-+|-. -++.| +..++....+-..+ +++
T Consensus 627 ~-~~les-~~~~~~~~~~~l~~~~~~~~~dl~~p~~~~~ed~~~~~e~~s~~~~~-q~~~~-~q~~~~~~~l~~~r-~~~ 701 (813)
T KOG1648|consen 627 K-DNLES-RRVMYTYVRRNLEEGYTQGMCDLLAPLLVTFEDEALTLECFSLLMLR-QRGKF-PQRPGMSKCLLNLR-LIQ 701 (813)
T ss_pred C-cchhh-heeeeeeeccccccccccchhhccCCcCCChhhcccccCCCcHHHHH-hcccC-CCCCCccccccccc-chh
Confidence 3 44444 78888888888889999999999999999987776666666665544 22333 23344433332222 566
Q ss_pred hhChhhhhhhhhcCCCcchhhhHhHHHhcccCCChhhHHHHHHHHhhcCC-----hHHHHHHHHHHHHcHHHHhCC-CCH
Q psy3328 164 IKMPHLYDHISKVGVPWPVIATKWFICMFADVLPVETVLRIWDCLFVEGP-----KILFRVSLTLIKLHERALLEC-EDF 237 (337)
Q Consensus 164 ~~~P~L~~hl~~~~i~~~~~~~~W~~tlFs~~l~~~~~~~iwD~~l~~g~-----~~l~~~~lail~~~~~~il~~-~~~ 237 (337)
-.+|-.. -++. .....++||..-|-++++.+-...+|....+... .+-++++++.- ...+.+... -+.
T Consensus 702 v~~~l~s-~id~----~qa~~f~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~-~~~~~~~t~~~~~ 775 (813)
T KOG1648|consen 702 VVDPLIS-DIDY----AQALSFRWFLLDFKRELSYECTYKVWEVIWAAQRLRITDDFAIFFGLATT-NYHDVLITNNFDY 775 (813)
T ss_pred hhcchhc-chhh----hhhcceeeeccCcccccCCCCcceeeEeeccccccccCcchhhhhhhHHH-hhHHHHhhcccch
Confidence 6666222 2211 1234589999999999988888888888877632 27777888774 334443332 345
Q ss_pred HHHHHHHHcC
Q psy3328 238 TTLVECFKSM 247 (337)
Q Consensus 238 ~~i~~~l~~~ 247 (337)
.+++.+++.+
T Consensus 776 t~~i~~~~~~ 785 (813)
T KOG1648|consen 776 TDMIKFFNEM 785 (813)
T ss_pred HHHHHHHHHH
Confidence 5666666544
No 22
>PF14961 BROMI: Broad-minded protein
Probab=97.62 E-value=0.0016 Score=67.43 Aligned_cols=156 Identities=13% Similarity=0.194 Sum_probs=110.9
Q ss_pred HHHHHHHHhhcCCCCcccchHHHHHHHHhhc-CChhHHHHHHHHHHHHh------hhhhc----c------CCc-hhhhh
Q psy3328 92 SRILKVFALDEKNIGYCQGLNYIAALILLVT-KHEENTYWIFRSVINKY------FSDYY----T------KTL-TGVVR 153 (337)
Q Consensus 92 ~~iL~~~~~~~~~i~Y~QG~~~i~~~ll~~~-~~e~~af~~~~~l~~~~------~~~~~----~------~~~-~~~~~ 153 (337)
.+++..|..+++. |=.+|..-.++.+++++ .+.+.+...+..+-... .|... . .+. +-...
T Consensus 1087 l~~~~~~~~~~~~-~~y~g~DWFvstvfli~~Gd~e~~~~fL~~fS~ll~SaflW~pRlh~s~~l~~~~~~s~i~p~~~~ 1165 (1296)
T PF14961_consen 1087 LHILFEFIHFCLQ-GSYPGHDWFVSTVFLIMLGDKERSLQFLQRFSRLLTSAFLWPPRLHASIHLPVDTAESGIHPVYFC 1165 (1296)
T ss_pred hHHHhhhhcccCC-CCCCCchhHHHHHHHHHcCChhHhHHHHHHHHHHHHHhHhccccccccccCCchhhhcCCCchhhh
Confidence 3444444444443 33356665555555554 45555555544443321 22111 0 111 11223
Q ss_pred hHHHHHHHHHhhChhhhhhhhhcCCCcchhhhHhHHHhcccCCChhhHHHHHHHHhhcCChHHHHHHHHHHHHcHHHHhC
Q psy3328 154 DIDVLSELVKIKMPHLYDHISKVGVPWPVIATKWFICMFADVLPVETVLRIWDCLFVEGPKILFRVSLTLIKLHERALLE 233 (337)
Q Consensus 154 ~~~~~~~ll~~~~P~L~~hl~~~~i~~~~~~~~W~~tlFs~~l~~~~~~~iwD~~l~~g~~~l~~~~lail~~~~~~il~ 233 (337)
.++.++.+++...|.++.-+...|.+|...+.+|+.-+|=+.++.+.+....=.-+..|+.+-.|+++|+++..+++|++
T Consensus 1166 ~~~~vE~ll~~E~P~V~saf~~sg~tpsqi~~rW~~QcFWnyldW~eI~~y~~~cil~G~dyqvY~~VailkHlq~~ilq 1245 (1296)
T PF14961_consen 1166 SCHYVEMLLKAELPLVFSAFRMSGFTPSQICQRWLSQCFWNYLDWPEICHYIAICILYGPDYQVYICVAILKHLQPEILQ 1245 (1296)
T ss_pred HHHHHHHHHHhhccHHHHHHHHcCCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHhcCccceeehhHHHHHHhhHHHHH
Confidence 46889999999999999999999999999999999999999999999999998999999999999999999999999998
Q ss_pred CCCHHHHHHHHHcCC
Q psy3328 234 CEDFTTLVECFKSMV 248 (337)
Q Consensus 234 ~~~~~~i~~~l~~~~ 248 (337)
..-..++..+++.-+
T Consensus 1246 ~~q~q~L~~flke~~ 1260 (1296)
T PF14961_consen 1246 HTQTQDLQVFLKEEA 1260 (1296)
T ss_pred hhhhchHHHHhhhcc
Confidence 765566666666443
No 23
>KOG2058|consensus
Probab=96.37 E-value=0.0056 Score=57.77 Aligned_cols=58 Identities=38% Similarity=0.781 Sum_probs=52.7
Q ss_pred hhHHHHHHHHHHhhhccchhHHHHHHHHhhhhhhhhchhhhhhhhhHHHHHHHHHHHH
Q psy3328 261 SGLNYIAALILLVTKHEENTYWIFRSVINKYFSDYYTKTLTGVVRDIDVLSELVNDYY 318 (337)
Q Consensus 261 ~~a~~~~~~~~l~~k~~~~~y~~~~~~i~~~~~~~~~~~~~~l~~d~~~l~~l~~~~~ 318 (337)
|..--+++...+..+.+++.||.+..++.+++|.||++++.|.+.|++||.+|+++++
T Consensus 244 QGmNflAallLL~~~~EE~AFW~Lv~iie~~lp~Yyt~nL~g~qvDQ~VL~~llre~l 301 (436)
T KOG2058|consen 244 QGMNFLAALLLLLMPSEEDAFWMLVALIENYLPRYYTPNLIGSQVDQKVLRELLREKL 301 (436)
T ss_pred hhHHHHHHHHHHhcCChHHHHHHHHHHHHHhchhhcCchhhhhhccHHHHHHHHHHHC
Confidence 3335577888888888999999999999999999999999999999999999999998
No 24
>KOG2197|consensus
Probab=68.61 E-value=2.2 Score=41.60 Aligned_cols=51 Identities=12% Similarity=-0.000 Sum_probs=36.0
Q ss_pred HHHHHHhhcCCCCchHHHHHHHHhcChHhhhhhhhc--ccCCChhHHHHHHhc
Q psy3328 6 KKKKEEAEIKHTSTFDFSIWMIISEADTLKKVTHQT--RHYGTGGYYAFMLNN 56 (337)
Q Consensus 6 ~klk~~~~~GiP~~~R~~vW~~llg~~~~~~~~~~~--~~~~~~~~y~~ll~~ 56 (337)
+-++....+||++.+|+.+|..|+|........++. .+......|..+...
T Consensus 68 ~~l~~i~~~gi~psir~evw~fll~~y~~~~~~~~~~~~r~~~~~~~~~l~~~ 120 (488)
T KOG2197|consen 68 KLLKLIILGGIDPSIRGEVWEFLLGCYDLDSTFEERNQLRVARRPQYNELLLV 120 (488)
T ss_pred hhheeeecCCCCCcccchhHHHHhcccCCCCchHHHHHHHhhcccchHHHHHH
Confidence 345566677999999999999999998755443332 233455777777665
No 25
>KOG4347|consensus
Probab=67.23 E-value=11 Score=37.34 Aligned_cols=47 Identities=36% Similarity=0.721 Sum_probs=43.2
Q ss_pred HhhhccchhHHHHHHHHhhhhhhhhchhhhhhhhhHHHHHHHHHHHH
Q psy3328 272 LVTKHEENTYWIFRSVINKYFSDYYTKTLTGVVRDIDVLSELVNDYY 318 (337)
Q Consensus 272 l~~k~~~~~y~~~~~~i~~~~~~~~~~~~~~l~~d~~~l~~l~~~~~ 318 (337)
+.--.+++.||.+....+.+.|+||+..+.|...|+.|..+|++++.
T Consensus 298 ll~~~EEeafwll~~lce~~ip~yys~~vvGtliDQ~vfe~lve~~l 344 (671)
T KOG4347|consen 298 LLFCKEEEAFWLLSKLCEIYIPDYYSKTVVGTLIDQSVFEELVEDTL 344 (671)
T ss_pred hhhhccchHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHhh
Confidence 44556788999999999999999999999999999999999999987
No 26
>KOG2224|consensus
Probab=59.81 E-value=3.6 Score=38.58 Aligned_cols=26 Identities=27% Similarity=0.530 Sum_probs=23.4
Q ss_pred HHHHHHHhhcCChhHHHHHHHHHHHH
Q psy3328 113 YIAALILLVTKHEENTYWIFRSVINK 138 (337)
Q Consensus 113 ~i~~~ll~~~~~e~~af~~~~~l~~~ 138 (337)
++++|++.-..+|+++||||+.+|.+
T Consensus 574 dlvapilaevldesdtfwcfvglmqn 599 (781)
T KOG2224|consen 574 DLVAPILAEVLDESDTFWCFVGLMQN 599 (781)
T ss_pred hhhhhHHHhhhccccchhhhhhhhcc
Confidence 67888888777999999999999986
No 27
>PF10815 ComZ: ComZ; InterPro: IPR024558 ComZ, which contains a leucine zipper motif, negatively regulates transcription of the ComG operon [].
Probab=57.07 E-value=12 Score=24.27 Aligned_cols=40 Identities=10% Similarity=0.248 Sum_probs=34.3
Q ss_pred HHHHHHHhhChhhhhhhhhcCCCcchhhhHhHHHhcccCC
Q psy3328 157 VLSELVKIKMPHLYDHISKVGVPWPVIATKWFICMFADVL 196 (337)
Q Consensus 157 ~~~~ll~~~~P~L~~hl~~~~i~~~~~~~~W~~tlFs~~l 196 (337)
.|..+--++.|+.-..|++.||..+.-....+.++|....
T Consensus 5 ~FmqIaMK~lPEak~~L~k~GIeLsme~~qP~m~L~~~VM 44 (56)
T PF10815_consen 5 EFMQIAMKYLPEAKEELDKKGIELSMEMLQPLMQLLTKVM 44 (56)
T ss_pred HHHHHHHHHhHHHHHHHHHcCccCCHHHHHHHHHHHHHHH
Confidence 4667788899999999999999999888899999887654
No 28
>KOG1102|consensus
Probab=55.10 E-value=2 Score=40.73 Aligned_cols=108 Identities=18% Similarity=0.260 Sum_probs=77.8
Q ss_pred HHHHHhhcCCCCcccchHHHHHHHHhhcCChhHHHHHHHHHHHHhhhhhccCCchhhhhhHHHHHHHHHhhChhhhhhhh
Q psy3328 95 LKVFALDEKNIGYCQGLNYIAALILLVTKHEENTYWIFRSVINKYFSDYYTKTLTGVVRDIDVLSELVKIKMPHLYDHIS 174 (337)
Q Consensus 95 L~~~~~~~~~i~Y~QG~~~i~~~ll~~~~~e~~af~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~P~L~~hl~ 174 (337)
|.+|..++++++|| ...+.+ ..+++...+...................+.-..|+.
T Consensus 24 l~~~~~~~~~~~~~--~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (397)
T KOG1102|consen 24 LAAYEPYNPEVGYC--VLHITS----------------------KSDGFQSSNERKLTELRDSPESIPDLSQSKRPGHVD 79 (397)
T ss_pred ccCCCccccccccc--hhhhhh----------------------cccccccCCcccccccccCccccccccccccccccc
Confidence 77888889999999 444444 123444444444444444444445555667778888
Q ss_pred hcCCCcchhhhHhHHHhcccCCChhhHHHHHHHHhhcCChHHHHHHHHHHHHc
Q psy3328 175 KVGVPWPVIATKWFICMFADVLPVETVLRIWDCLFVEGPKILFRVSLTLIKLH 227 (337)
Q Consensus 175 ~~~i~~~~~~~~W~~tlFs~~l~~~~~~~iwD~~l~~g~~~l~~~~lail~~~ 227 (337)
..+ ....+...|....|.+........++||.+..+|...+....-+.+...
T Consensus 80 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (397)
T KOG1102|consen 80 SSE-PTNELYPKSDERIFKDKPLLSLTLDLWDVKLLEGEQELTALSSSWLKVI 131 (397)
T ss_pred ccc-cccccccccccccccccccccccchhHHHHhhhhHHHHHHHHHHhhhhc
Confidence 777 7777888999999999999999999999999998887776666666654
No 29
>KOG2221|consensus
Probab=48.88 E-value=17 Score=31.23 Aligned_cols=41 Identities=24% Similarity=0.626 Sum_probs=36.4
Q ss_pred cchhHHHHHHHHhhhhhhhhchhhhhhhhhHHHHHHHHHHH
Q psy3328 277 EENTYWIFRSVINKYFSDYYTKTLTGVVRDIDVLSELVNDY 317 (337)
Q Consensus 277 ~~~~y~~~~~~i~~~~~~~~~~~~~~l~~d~~~l~~l~~~~ 317 (337)
....+|...++.++++++||++....+++|-..|.-|++..
T Consensus 204 ~rdaf~~~vqicekylqgy~~sgleaiq~dg~il~~Llkk~ 244 (267)
T KOG2221|consen 204 ARDAFWCFVQICEKYLQGYYSSGLEAIQNDGGILEGLLKKA 244 (267)
T ss_pred HHHHHHHHHHHHHHHcccccccchhhhhcccHHHHHHHHhc
Confidence 35669999999999999999999999999999998888764
No 30
>KOG2222|consensus
Probab=45.28 E-value=24 Score=33.80 Aligned_cols=44 Identities=27% Similarity=0.634 Sum_probs=39.0
Q ss_pred hccchhHHHHHHHHhhhhh-hhhchhhhhhhhhHHHHHHHHHHHH
Q psy3328 275 KHEENTYWIFRSVINKYFS-DYYTKTLTGVVRDIDVLSELVNDYY 318 (337)
Q Consensus 275 k~~~~~y~~~~~~i~~~~~-~~~~~~~~~l~~d~~~l~~l~~~~~ 318 (337)
-.+++.||.+..+++..+| .||+....|++-|..|...|+.-+.
T Consensus 271 ~~ee~afwmmaaiiedilp~nfysqtllgiqaderv~~~li~~~l 315 (848)
T KOG2222|consen 271 CEEENAFWMMAAIIEDILPANFYSQTLLGIQADERVMHHLIACHL 315 (848)
T ss_pred hcchhHHHHHHHHHHHhcCchhhhhhHhccchhHHHHHHHHHhcc
Confidence 4568899999999999987 8999999999999999999887654
No 31
>smart00164 TBC Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs. Widespread domain present in Gyp6 and Gyp7, thereby giving rise to the notion that it performs a GTP-activator activity on Rab-like GTPases.
Probab=44.31 E-value=49 Score=27.56 Aligned_cols=58 Identities=31% Similarity=0.698 Sum_probs=43.9
Q ss_pred hhHHHHHHHHHHhhhccchhHHHHHHHHhhhhhhhhchhhhhhhhhHHHHHHHHHHHH
Q psy3328 261 SGLNYIAALILLVTKHEENTYWIFRSVINKYFSDYYTKTLTGVVRDIDVLSELVNDYY 318 (337)
Q Consensus 261 ~~a~~~~~~~~l~~k~~~~~y~~~~~~i~~~~~~~~~~~~~~l~~d~~~l~~l~~~~~ 318 (337)
|..-.+++........++..||.+..++++..+.+|..++.++..+...+..+++...
T Consensus 93 QGm~~i~~~ll~~~~~e~~af~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~ 150 (199)
T smart00164 93 QGMNFLAAPLLLVMPDEEDAFWCLVKLMERYGPNFYLPDMSGLQLDLLQLDRLVKEYD 150 (199)
T ss_pred ccHHHHHHHHHHhcCCHHHHHHHHHHHHHHhCcccCCCChHHHHHHHHHHHHHHHHHC
Confidence 3334455555454446778899999999998888787777788899999888888765
No 32
>PF14165 YtzH: YtzH-like protein
Probab=35.15 E-value=14 Score=26.63 Aligned_cols=17 Identities=29% Similarity=0.483 Sum_probs=14.8
Q ss_pred cccccchhhHhhhhhcC
Q psy3328 321 TLTGVVRDIDVLSELVK 337 (337)
Q Consensus 321 ~~~~~~~~~~~~~~~~~ 337 (337)
-=||+++||+-+|.|||
T Consensus 20 DccgTvsEcEQieRLvk 36 (87)
T PF14165_consen 20 DCCGTVSECEQIERLVK 36 (87)
T ss_pred hccCcHHHHHHHHHHHH
Confidence 34899999999999986
No 33
>TIGR02433 lysidine_TilS_C tRNA(Ile)-lysidine synthetase, C-terminal domain. TIGRFAMs model TIGR02432 describes the family of the N-terminal domain of tRNA(Ile)-lysidine synthetase. This family (TIGR02433) describes a small C-terminal domain of about 50 residues present in about half the members of family TIGR02432,and in no other protein. Characterized examples of tRNA(Ile)-lysidine synthetase from E. coli and Bacillus subtilis both contain this domain.
Probab=34.05 E-value=5.2 Score=25.04 Aligned_cols=25 Identities=20% Similarity=-0.039 Sum_probs=18.3
Q ss_pred hhHHHHHHhhc-CCCCchHHHHHHHH
Q psy3328 4 KKKKKKEEAEI-KHTSTFDFSIWMII 28 (337)
Q Consensus 4 ~~~klk~~~~~-GiP~~~R~~vW~~l 28 (337)
.++++|.+... +||+..|..+|.++
T Consensus 19 ~~k~lkk~~~e~kiP~~~R~~~pll~ 44 (47)
T TIGR02433 19 GSKKLKKLFIDAKVPPWLRDRIPLLF 44 (47)
T ss_pred CCchHHHHHHHcCCCHHHHcCccEEE
Confidence 35677777766 99999998866443
No 34
>PF08109 Antimicrobial14: Lactocin 705 family; InterPro: IPR012517 This family consists of lactocin 705 which is a bacteriocin produced by Lactobacillus casei CRL 705. Lactocin 705 is a class IIb bacteriocin, whose activity depends upon the complementation of two peptides (705-alpha and 705-beta) of 33 amino acid residues each. Lactocin 705 is active against several Gram-positive bacteria, including food-borne pathogens and is a good candidate to be used for biopreservation of fermented meats [].
Probab=31.33 E-value=37 Score=18.47 Aligned_cols=16 Identities=31% Similarity=0.341 Sum_probs=10.9
Q ss_pred CCcccchHHHHHHHHh
Q psy3328 105 IGYCQGLNYIAALILL 120 (337)
Q Consensus 105 i~Y~QG~~~i~~~ll~ 120 (337)
-||.||+++.+.-.++
T Consensus 3 sgyiqgipdflkgylh 18 (31)
T PF08109_consen 3 SGYIQGIPDFLKGYLH 18 (31)
T ss_pred cccccccHHHHHHHHh
Confidence 4799998876654443
No 35
>PF00566 RabGAP-TBC: Rab-GTPase-TBC domain; InterPro: IPR000195 Identification of a TBC domain in GYP6_YEAST and GYP7_YEAST, which are GTPase activator proteins of yeast Ypt6 and Ypt7, imply that these domains are GTPase activator proteins of Rab-like small GTPases [].; GO: 0005097 Rab GTPase activator activity, 0032313 regulation of Rab GTPase activity, 0005622 intracellular; PDB: 2G77_A 1FKM_A 3HZJ_A 3QYE_A 2QFZ_A 3QYB_A 2QQ8_A 3DZX_A 3QWL_A.
Probab=21.36 E-value=2.5e+02 Score=23.34 Aligned_cols=58 Identities=29% Similarity=0.639 Sum_probs=42.1
Q ss_pred hhHHHHHHHHHHhhhccchhHHHHHHHHhhhhhhhhchhhhhhhhhHHHHHHHHHHHH
Q psy3328 261 SGLNYIAALILLVTKHEENTYWIFRSVINKYFSDYYTKTLTGVVRDIDVLSELVNDYY 318 (337)
Q Consensus 261 ~~a~~~~~~~~l~~k~~~~~y~~~~~~i~~~~~~~~~~~~~~l~~d~~~l~~l~~~~~ 318 (337)
+....+++........+...||....+++...++++..+..+++...+.+..+++...
T Consensus 91 qG~~~i~~~ll~~~~~e~~af~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~ 148 (214)
T PF00566_consen 91 QGMNDIAAPLLLVFLDEEEAFWCFVQLLNYYLPDFFQPNFKGLQKILKIFEQLLKKHD 148 (214)
T ss_dssp TTHHHHHHHHHHTCSHHHHHHHHHHHHHTHHGGGGTSTTHHHHHHHHHHHHHHHHHHT
T ss_pred chhhhhhhhhhhhcccccchhccccchhcccccccccccccccchhhhhHHHHHHhhh
Confidence 3334455444434445556899999999887899999988888888888888887765
No 36
>COG5210 GTPase-activating protein [General function prediction only]
Probab=21.29 E-value=1.6e+02 Score=28.82 Aligned_cols=53 Identities=34% Similarity=0.670 Sum_probs=42.1
Q ss_pred HHHHHHHhhhccchhHHHHHHHHh-hhhhhhhchhhhhhhhhHHHHHHHHHHHH
Q psy3328 266 IAALILLVTKHEENTYWIFRSVIN-KYFSDYYTKTLTGVVRDIDVLSELVNDYY 318 (337)
Q Consensus 266 ~~~~~~l~~k~~~~~y~~~~~~i~-~~~~~~~~~~~~~l~~d~~~l~~l~~~~~ 318 (337)
+++.....-..++..||.+..++. ...+.++..++.|+.++..++..++++.-
T Consensus 308 l~a~ll~~~~~Ee~AF~~l~~L~~~~~l~~~~~~~~~G~~~~~~~l~~~v~~~~ 361 (496)
T COG5210 308 LAAPLLLVLESEEQAFWCLVKLLKNYGLPGYFLKNLSGLHRDLKVLDDLVEELD 361 (496)
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHHhccchhhcccCCcHHHHHHHHHHHHHHHHH
Confidence 444333334447889999999999 55899999999999999999999887765
No 37
>PF12829 Mhr1: Transcriptional regulation of mitochondrial recombination; InterPro: IPR024629 These proteins are involved in regulation of RNA polymerase II-dependent transcription. They are also involved in regulation of mitochondrial DNA recombination, maintenance, repair, and generation of homoplasmic cells [, , , ].
Probab=20.58 E-value=22 Score=26.05 Aligned_cols=42 Identities=7% Similarity=-0.069 Sum_probs=27.7
Q ss_pred HHHHhhcC---CCCchHHHHHHHHhcChHhhhhhhhcccCCChhHHHHHHhc
Q psy3328 8 KKEEAEIK---HTSTFDFSIWMIISEADTLKKVTHQTRHYGTGGYYAFMLNN 56 (337)
Q Consensus 8 lk~~~~~G---iP~~~R~~vW~~llg~~~~~~~~~~~~~~~~~~~y~~ll~~ 56 (337)
.++..+-| +|+.+|.+.|+-++-+.....+ ...+.|..|.+.
T Consensus 30 ~~Q~~~~gkk~~pp~lRkD~W~pm~vv~f~~~~-------~g~~~yq~Lrel 74 (91)
T PF12829_consen 30 LKQFPFPGKKNKPPSLRKDYWRPMCVVNFPNYE-------VGVSAYQKLREL 74 (91)
T ss_pred HHhccCCCcccCCchhccccceEeEEEECCChH-------HHHHHHHHHHHH
Confidence 44555555 8999999999988866544222 134667776665
No 38
>PF05979 DUF896: Bacterial protein of unknown function (DUF896); InterPro: IPR009242 This family consists of several short, hypothetical bacterial proteins of unknown function. They may be involved in the bacterial SOS response [].; PDB: 2HEP_A 3BHP_C 2JVD_A.
Probab=20.46 E-value=1.4e+02 Score=20.34 Aligned_cols=36 Identities=11% Similarity=0.128 Sum_probs=23.0
Q ss_pred hhhhchhhhhhhhhHHHHHHHHHHHHhhcccccchh
Q psy3328 293 SDYYTKTLTGVVRDIDVLSELVNDYYTKTLTGVVRD 328 (337)
Q Consensus 293 ~~~~~~~~~~l~~d~~~l~~l~~~~~~~~~~~~~~~ 328 (337)
.-+-.....||..+-+.-++-+++.|++.++|.+++
T Consensus 9 eLa~K~K~~gLT~eE~~Eq~~LR~eYl~~fR~~~~~ 44 (65)
T PF05979_consen 9 ELAKKSKEEGLTEEEKAEQAELRQEYLQNFRGNFRS 44 (65)
T ss_dssp HHHHHHHTT---HHHHHHHHHHHHHHHHTTHHHHHH
T ss_pred HHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333445567888888888888888887777766653
No 39
>PF04181 RPAP2_Rtr1: Rtr1/RPAP2 family; InterPro: IPR007308 This entry represents a domain found in PAP2 (RNAP II associated polypeptide) protein and the yeast Rtr1 proteins. Its function is not known however it is thought to be a zinc finger.
Probab=20.10 E-value=89 Score=22.01 Aligned_cols=20 Identities=15% Similarity=0.215 Sum_probs=16.9
Q ss_pred hHHHHHHHHHHHHhhccccc
Q psy3328 306 DIDVLSELVNDYYTKTLTGV 325 (337)
Q Consensus 306 d~~~l~~l~~~~~~~~~~~~ 325 (337)
+..++.++|.|+.+.++||=
T Consensus 6 ~~~~y~dvv~ER~~~~~CGY 25 (79)
T PF04181_consen 6 QPSDYDDVVEERNINGLCGY 25 (79)
T ss_pred CHHHHHHHHHHHHhCCCCCC
Confidence 35678899999999999983
Done!