BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3329
(694 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P35858|ALS_HUMAN Insulin-like growth factor-binding protein complex acid labile
subunit OS=Homo sapiens GN=IGFALS PE=1 SV=1
Length = 605
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 147/503 (29%), Positives = 227/503 (45%), Gaps = 34/503 (6%)
Query: 45 LYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYIS 104
L++ LS + P F NL++L L+L G L +EP L +L +L L R L ++
Sbjct: 79 LWLDGNNLSSVPPAAFQNLSSLGFLNLQGGQLGSLEPQALLGLENLCHLHLERNQLRSLA 138
Query: 105 PSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWL 164
F + L +L LS N+L S ++ L G LG L L+L + ++ LPD F L
Sbjct: 139 LGTFAHTPALASLGLSNNRL-SRLEDGLFEG-LGSLWDLNLGWNSLAVLPDAAFRGLGSL 196
Query: 165 RNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNP 224
R L LA N L L A G L L LDLS L+ + + FV +L+ LYL N
Sbjct: 197 RELVLAGNRLAYLQPALFSG--LAELRELDLSRNALRA-IKANVFVQLPRLQKLYLDRN- 252
Query: 225 LSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSP 284
L AA A L L L L + ++ L +TF L+ L +SHN +
Sbjct: 253 LIAAVAPGAFLGLKALRWLDLSHNRVAGLLEDTFPGLLGLRVLRLSHNAIASLRPRTFKD 312
Query: 285 LESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNC 344
L LE L +G++ +++++ +F + L+ L L N+L+ +++G F LT+++V+ L+
Sbjct: 313 LHFLEELQLGHNRIRQLAERSFEGLGQLEVLTLDHNQLQEVKAGAFLGLTNVAVMNLSGN 372
Query: 345 GLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFI 404
L L E VF L L L G+ + I + L LF+
Sbjct: 373 CLRNLPEQVFR---GLGKLHSLHLEGS------------CLGRIRPHTFTGLSGLRRLFL 417
Query: 405 LNETVF----HENYTYPDLEELRLSGNPLHVLPTGNLLPPQLSRLRSLDLSRCKIDYLPP 460
+ + + +L EL L+ N L LP + L L +L L LSR ++ LP
Sbjct: 418 KDNGLVGIEEQSLWGLAELLELDLTSNQLTHLP--HRLFQGLGKLEYLLLSRNRLAELPA 475
Query: 461 NVFNNTRNITSLNLANNNLSMTSELSFQFLDVLLELESLDLSNNNLTHISPTVLRHNRAI 520
+ + L++++N L L L L L L L NN+L +P +
Sbjct: 476 DALGPLQRAFWLDVSHNRLEA---LPNSLLAPLGRLRYLSLRNNSLRTFTP----QPPGL 528
Query: 521 TSIKLVGNPWKCDCNIADMWEWA 543
+ L GNPW C C + + ++A
Sbjct: 529 ERLWLEGNPWDCGCPLKALRDFA 551
Score = 89.7 bits (221), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 107/382 (28%), Positives = 160/382 (41%), Gaps = 44/382 (11%)
Query: 19 LITINLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLR 77
L +NL N + + + AF SL L + L+ + P F+ L L +LDLS N LR
Sbjct: 172 LWDLNLGWNSLAVLPDAAFRGLGSLRELVLAGNRLAYLQPALFSGLAELRELDLSRNALR 231
Query: 78 IIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTL----- 132
I+ VF L L+ L L+R + ++P AF L L+ L+LS N++ ++ T
Sbjct: 232 AIKANVFVQLPRLQKLYLDRNLIAAVAPGAFLGLKALRWLDLSHNRVAGLLEDTFPGLLG 291
Query: 133 -----------------VLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELI 175
+L L+ L L + I L + F L L L N+L
Sbjct: 292 LRVLRLSHNAIASLRPRTFKDLHFLEELQLGHNRIRQLAERSFEGLGQLEVLTLDHNQLQ 351
Query: 176 DLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALK 235
++ LG L ++ ++LS L+ L E F KL +L+L G+ L ++
Sbjct: 352 EVKAGAFLG--LTNVAVMNLSGNCLRN-LPEQVFRGLGKLHSLHLEGSCLG------RIR 402
Query: 236 P-----LTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEH 290
P L+ L RL L++ GL + + L ELD++ N L L L LE+
Sbjct: 403 PHTFTGLSGLRRLFLKDNGLVGIEEQSLWGLAELLELDLTSNQLTHLPHRLFQGLGKLEY 462
Query: 291 LDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLN 350
L + + L + + L +S N+LE L + L L L L L N L
Sbjct: 463 LLLSRNRLAELPADALGPLQRAFWLDVSHNRLEALPNSLLAPLGRLRYLSLRNNSLRTFT 522
Query: 351 ETVFHENYTYPDLEELRLSGNP 372
P LE L L GNP
Sbjct: 523 PQP-------PGLERLWLEGNP 537
Score = 73.6 bits (179), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 111/398 (27%), Positives = 164/398 (41%), Gaps = 48/398 (12%)
Query: 138 GKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLG-QNLVHLDSLDLS 196
G L L + +S++P F N + L LNL +L L+ LG +NL H L L
Sbjct: 74 GGTQALWLDGNNLSSVPPAAFQNLSSLGFLNLQGGQLGSLEPQALLGLENLCH---LHLE 130
Query: 197 NCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPAN 256
L+ L+ F + L +L LS N LS + + + L L L+L L+ LP
Sbjct: 131 RNQLRS-LALGTFAHTPALASLGLSNNRLSRLEDGL-FEGLGSLWDLNLGWNSLAVLPDA 188
Query: 257 TFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLI 316
F L+EL ++ N L AL S L L LD+ + L+ I + F+++ L+ L
Sbjct: 189 AFRGLGSLRELVLAGNRLAYLQPALFSGLAELRELDLSRNALRAIKANVFVQLPRLQKLY 248
Query: 317 LSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENY------------------ 358
L N + + G F L L L+L++ + L E F
Sbjct: 249 LDRNLIAAVAPGAFLGLKALRWLDLSHNRVAGLLEDTFPGLLGLRVLRLSHNAIASLRPR 308
Query: 359 TYPD---LEELRLSGNPLHVLPDST----KQYSMRTIPTQIWKNFDFLVILFILNETVFH 411
T+ D LEEL+L N + L + + Q + T+ + L + N V +
Sbjct: 309 TFKDLHFLEELQLGHNRIRQLAERSFEGLGQLEVLTLDHNQLQEVKAGAFLGLTNVAVMN 368
Query: 412 ENYTYPDLEELRLSGNPLHVLPTGNLLPPQLSRLRSLDLSRCKIDYLPPNVFNNTRNITS 471
LSGN L LP L +L SL L + + P+ F +
Sbjct: 369 ------------LSGNCLRNLPEQVFR--GLGKLHSLHLEGSCLGRIRPHTFTGLSGLRR 414
Query: 472 LNLANNNLSMTSELSFQFLDVLLELESLDLSNNNLTHI 509
L L +N L E S L LLE LDL++N LTH+
Sbjct: 415 LFLKDNGLVGIEEQSLWGLAELLE---LDLTSNQLTHL 449
>sp|O02833|ALS_PAPHA Insulin-like growth factor-binding protein complex acid labile
subunit OS=Papio hamadryas GN=IGFALS PE=2 SV=1
Length = 605
Score = 119 bits (299), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 146/503 (29%), Positives = 223/503 (44%), Gaps = 34/503 (6%)
Query: 45 LYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYIS 104
L++ LS I P F NL++L L+L G L +EP L +L +L L R L ++
Sbjct: 79 LWLDSNNLSSIPPAAFRNLSSLAFLNLQGGQLGSLEPQALLGLENLCHLHLERNQLRSLA 138
Query: 105 PSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWL 164
F L L LS N+L S ++ L G LG L L+L + ++ LPD F L
Sbjct: 139 VGTFAYTPALALLGLSNNRL-SRLEDGLFEG-LGNLWDLNLGWNSLAVLPDAAFRGLGGL 196
Query: 165 RNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNP 224
R L LA N L L A G L L LDLS L+ + + F +L+ LYL N
Sbjct: 197 RELVLAGNRLAYLQPALFSG--LAELRELDLSRNALRA-IKANVFAQLPRLQKLYLDRN- 252
Query: 225 LSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSP 284
L AA A L L L L + ++ L +TF L+ L +SHN +
Sbjct: 253 LIAAVAPGAFLGLKALRWLDLSHNRVAGLLEDTFPGLLGLRVLRLSHNAIASLRPRTFED 312
Query: 285 LESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNC 344
L LE L +G++ +++++ +F + L+ L L N+L+ ++ G F LT+++V+ L+
Sbjct: 313 LHFLEELQLGHNRIRQLAERSFEGLGQLEVLTLDHNQLQEVKVGAFLGLTNVAVMNLSGN 372
Query: 345 GLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFI 404
L L E VF L L L G+ + I + L LF+
Sbjct: 373 CLRNLPEQVFR---GLGKLHSLHLEGS------------CLGRIRPHTFAGLSGLRRLFL 417
Query: 405 LNETVF----HENYTYPDLEELRLSGNPLHVLPTGNLLPPQLSRLRSLDLSRCKIDYLPP 460
+ + + +L EL L+ N L LP + L L +L L LS ++ LP
Sbjct: 418 KDNGLVGIEEQSLWGLAELLELDLTSNQLTHLP--HQLFQGLGKLEYLLLSHNRLAELPA 475
Query: 461 NVFNNTRNITSLNLANNNLSMTSELSFQFLDVLLELESLDLSNNNLTHISPTVLRHNRAI 520
+ + L++++N L L L L L L+L NN+L +P +
Sbjct: 476 DALGPLQRAFWLDVSHNRLEA---LPGSLLASLGRLRYLNLRNNSLRTFTP----QPPGL 528
Query: 521 TSIKLVGNPWKCDCNIADMWEWA 543
+ L GNPW C C + + ++A
Sbjct: 529 ERLWLEGNPWDCSCPLKALRDFA 551
Score = 93.2 bits (230), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 106/377 (28%), Positives = 158/377 (41%), Gaps = 34/377 (9%)
Query: 19 LITINLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLR 77
L +NL N + + + AF L L + L+ + P F+ L L +LDLS N LR
Sbjct: 172 LWDLNLGWNSLAVLPDAAFRGLGGLRELVLAGNRLAYLQPALFSGLAELRELDLSRNALR 231
Query: 78 IIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTL----- 132
I+ VF L L+ L L+R + ++P AF L L+ L+LS N++ ++ T
Sbjct: 232 AIKANVFAQLPRLQKLYLDRNLIAAVAPGAFLGLKALRWLDLSHNRVAGLLEDTFPGLLG 291
Query: 133 -----------------VLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELI 175
+L L+ L L + I L + F L L L N+L
Sbjct: 292 LRVLRLSHNAIASLRPRTFEDLHFLEELQLGHNRIRQLAERSFEGLGQLEVLTLDHNQLQ 351
Query: 176 DLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALK 235
++ V LG L ++ ++LS L+ L E F KL +L+L G+ L
Sbjct: 352 EVKVGAFLG--LTNVAVMNLSGNCLRN-LPEQVFRGLGKLHSLHLEGSCLGRIRPHT-FA 407
Query: 236 PLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGY 295
L+ L RL L++ GL + + L ELD++ N L L L LE+L + +
Sbjct: 408 GLSGLRRLFLKDNGLVGIEEQSLWGLAELLELDLTSNQLTHLPHQLFQGLGKLEYLLLSH 467
Query: 296 SNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFH 355
+ L + + L +S N+LE L L +L L L L N L
Sbjct: 468 NRLAELPADALGPLQRAFWLDVSHNRLEALPGSLLASLGRLRYLNLRNNSLRTFTPQP-- 525
Query: 356 ENYTYPDLEELRLSGNP 372
P LE L L GNP
Sbjct: 526 -----PGLERLWLEGNP 537
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 118/420 (28%), Positives = 176/420 (41%), Gaps = 48/420 (11%)
Query: 91 EYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGI 150
+ L L+ NL+ I P+AF NL+ L L L +L S ++ +LG L L L L ++ +
Sbjct: 77 QALWLDSNNLSSIPPAAFRNLSSLAFLNLQGGQLGS-LEPQALLG-LENLCHLHLERNQL 134
Query: 151 SNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFV 210
+L FA L L L+ N L L+ L + L +L L+L L L + AF
Sbjct: 135 RSLAVGTFAYTPALALLGLSNNRLSRLE--DGLFEGLGNLWDLNLGWNSLA-VLPDAAFR 191
Query: 211 NATKLRTLYLSGNPLSAADLSVAL-KPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDI 269
LR L L+GN L A L AL L +L L L L + AN F + LQ+L +
Sbjct: 192 GLGGLRELVLAGNRL--AYLQPALFSGLAELRELDLSRNALRAIKANVFAQLPRLQKLYL 249
Query: 270 SHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGL 329
N + L++L LD+ ++ + + TF + L+ L LS N + +L
Sbjct: 250 DRNLIAAVAPGAFLGLKALRWLDLSHNRVAGLLEDTFPGLLGLRVLRLSHNAIASLRPRT 309
Query: 330 FQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIP 389
F++L L L+L + + +L E F + Q + T+
Sbjct: 310 FEDLHFLEELQLGHNRIRQLAERSF-----------------------EGLGQLEVLTLD 346
Query: 390 TQIWKNFDFLVILFILNETVFHENYTYPDLEELRLSGNPLHVLPTGNLLPPQLSRLRSLD 449
+ L + N V + LSGN L LP L +L SL
Sbjct: 347 HNQLQEVKVGAFLGLTNVAV------------MNLSGNCLRNLPEQVFR--GLGKLHSLH 392
Query: 450 LSRCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSFQFLDVLLELESLDLSNNNLTHI 509
L + + P+ F + L L +N L E S L LLE LDL++N LTH+
Sbjct: 393 LEGSCLGRIRPHTFAGLSGLRRLFLKDNGLVGIEEQSLWGLAELLE---LDLTSNQLTHL 449
>sp|P70389|ALS_MOUSE Insulin-like growth factor-binding protein complex acid labile
subunit OS=Mus musculus GN=Igfals PE=2 SV=1
Length = 603
Score = 110 bits (274), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 144/528 (27%), Positives = 231/528 (43%), Gaps = 71/528 (13%)
Query: 45 LYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYIS 104
L++ LS I F NL++L+ L+L G+ LR +EP L +L +L L R L ++
Sbjct: 79 LWLDGNNLSSIPSAAFQNLSSLDFLNLQGSWLRSLEPQALLGLQNLYHLHLERNLLRSLA 138
Query: 105 PSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWL 164
F + L +L L N L ++ L G L L L+L + + LPD VF L
Sbjct: 139 AGLFRHTPSLASLSLG-NNLLGRLEEGLFRG-LSHLWDLNLGWNSLVVLPDTVFQGLGNL 196
Query: 165 RNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNP 224
L LA N+L L A G L L LDLS L+ + + F++ +L+ LYL N
Sbjct: 197 HELVLAGNKLTYLQPALLCG--LGELRELDLSRNALRS-VKANVFIHLPRLQKLYLDRNL 253
Query: 225 LSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSP 284
++A A + L L L + ++ L +TF L L ++HN +
Sbjct: 254 ITAVA-PRAFLGMKALRWLDLSHNRVAGLLEDTFPGLLGLHVLRLAHNAITSLRPRTFKD 312
Query: 285 LESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNC 344
L LE L +G++ ++++ TF + L+ L L+ N++ ++ G F L +++V+ L+
Sbjct: 313 LHFLEELQLGHNRIRQLGEKTFEGLGQLEVLTLNDNQIHEVKVGAFFGLFNVAVMNLSGN 372
Query: 345 GLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFI 404
L L E VF L L + LH+ + + I + L LF+
Sbjct: 373 CLRSLPEHVFQ------GLGRL----HSLHL-----EHSCLGRIRLHTFAGLSGLRRLFL 417
Query: 405 LNETVFHENYTYPDLEELRLSGNPLHVLPTGNLLPPQLSRLRSLDLSRCKIDYLPPNVFN 464
+ ++ +EE L+G LS L LDL+ ++ +LP +F
Sbjct: 418 RDNSI-------SSIEEQSLAG---------------LSELLELDLTANQLTHLPRQLFQ 455
Query: 465 NTRNITSLNLANNNLSMTSELSFQFLDVLLELES---LDLSNNNLTHISPTV-------- 513
+ L L+NN L+M SE DVL L+ LDLS+N L + +
Sbjct: 456 GLGQLEYLLLSNNQLTMLSE------DVLGPLQRAFWLDLSHNRLETPAEGLFSSLGRLR 509
Query: 514 ---LRHNRAITSIKLVG--------NPWKCDCNIADMWEWATREKGDI 550
LR+N T + G NPW C C + + ++A + G +
Sbjct: 510 YLNLRNNSLQTFVPQPGLERLWLDANPWDCSCPLKALRDFALQNPGVV 557
Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 144/345 (41%), Gaps = 26/345 (7%)
Query: 32 VEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLE 91
G F SL L + L ++ F L+ L L+L N L ++ VF L +L
Sbjct: 138 AAGLFRHTPSLASLSLGNNLLGRLEEGLFRGLSHLWDLNLGWNSLVVLPDTVFQGLGNLH 197
Query: 92 YLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKS---------------HIDWTLVLG- 135
L+L LTY+ P+ L L+ L+LS+N L+S ++D L+
Sbjct: 198 ELVLAGNKLTYLQPALLCGLGELRELDLSRNALRSVKANVFIHLPRLQKLYLDRNLITAV 257
Query: 136 ------NLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVH 189
+ L LDL + ++ L ++ F L L LA N + L T ++L
Sbjct: 258 APRAFLGMKALRWLDLSHNRVAGLLEDTFPGLLGLHVLRLAHNAITSLRPRTF--KDLHF 315
Query: 190 LDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCG 249
L+ L L + ++ L E F +L L L+ N + + A L + ++L
Sbjct: 316 LEELQLGHNRIR-QLGEKTFEGLGQLEVLTLNDNQIHEVKVG-AFFGLFNVAVMNLSGNC 373
Query: 250 LSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKM 309
L LP + F L L + H+ L + L L L + +++ I + +
Sbjct: 374 LRSLPEHVFQGLGRLHSLHLEHSCLGRIRLHTFAGLSGLRRLFLRDNSISSIEEQSLAGL 433
Query: 310 TSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVF 354
+ L L L+ N+L L LFQ L L L L+N LT L+E V
Sbjct: 434 SELLELDLTANQLTHLPRQLFQGLGQLEYLLLSNNQLTMLSEDVL 478
Score = 40.4 bits (93), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 89/221 (40%), Gaps = 34/221 (15%)
Query: 310 TSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLN-------ETVFHENYTY-- 360
S + L L GN L ++ S FQNL+ L L L L L + ++H +
Sbjct: 74 VSTRALWLDGNNLSSIPSAAFQNLSSLDFLNLQGSWLRSLEPQALLGLQNLYHLHLERNL 133
Query: 361 ------------PDLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNET 408
P L L L N L L + R + + +W L +L +T
Sbjct: 134 LRSLAAGLFRHTPSLASLSLGNNLLGRLEEGL----FRGL-SHLWDLNLGWNSLVVLPDT 188
Query: 409 VFHENYTYPDLEELRLSGNPLHVLPTGNLLPPQLSRLRSLDLSRCKIDYLPPNVFNNTRN 468
VF +L EL L+GN L L L L LR LDLSR + + NVF +
Sbjct: 189 VFQ---GLGNLHELVLAGNKLTYLQPALLC--GLGELRELDLSRNALRSVKANVFIHLPR 243
Query: 469 ITSLNLANNNLSMTSELSFQFLDVLLELESLDLSNNNLTHI 509
+ L L N ++ + +F + L LDLS+N + +
Sbjct: 244 LQKLYLDRNLITAVAPRAFLGMKA---LRWLDLSHNRVAGL 281
>sp|Q80X72|LRC15_MOUSE Leucine-rich repeat-containing protein 15 OS=Mus musculus GN=Lrrc15
PE=2 SV=1
Length = 579
Score = 107 bits (266), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 110/362 (30%), Positives = 162/362 (44%), Gaps = 29/362 (8%)
Query: 33 EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEY 92
E FL +L+ L M++ L+ I P F NL +L L L+ N L+ + +F + +LE
Sbjct: 70 EDKFLNISALIALKMEKNELANIMPGAFRNLGSLRHLSLANNKLKNLPVRLFQDVNNLET 129
Query: 93 LMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISN 152
L+L+ L I P+ F ++LK L+L N L+ + V +L L L+L +G ++
Sbjct: 130 LLLSNNQLVQIQPAQFSQFSNLKELQLYGNNLEYIPEG--VFDHLVGLTKLNLGNNGFTH 187
Query: 153 LPDNVFANNTWLRNLNLAENELIDLDVAT------------------TLGQNLVH----L 190
L VF + L+ L L EN L D+ + T TL L H L
Sbjct: 188 LSPRVFQHLGNLQVLRLYENRLSDIPMGTFDALGNLQELALQENQIGTLSPGLFHNNRNL 247
Query: 191 DSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGL 250
L LSN H+ L F+ L L L GN L V P+ L L L N +
Sbjct: 248 QRLYLSNNHISH-LPPGIFMQLPHLNKLTLFGNSLKELSPGV-FGPMPNLRELWLYNNHI 305
Query: 251 SRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMT 310
+ LP N F LQ L +SHN L + L +L L + + LQ + + F +
Sbjct: 306 TSLPDNAFSHLNQLQVLILSHNQLSYISPGAFNGLTNLRELSLHTNALQDLDGNVFRSLA 365
Query: 311 SLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSG 370
+L+ + L N+L L +F N+ L ++L N L L +F +L ELRL
Sbjct: 366 NLRNVSLQNNRLRQLPGSIFANVNGLMTIQLQNNNLENLPLGIFDH---LGNLCELRLYD 422
Query: 371 NP 372
NP
Sbjct: 423 NP 424
Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 126/453 (27%), Positives = 195/453 (43%), Gaps = 48/453 (10%)
Query: 136 NLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDL 195
N+ L L + ++ ++N+ F N LR+L+LA N+L +L V L Q++ +L++L L
Sbjct: 75 NISALIALKMEKNELANIMPGAFRNLGSLRHLSLANNKLKNLPV--RLFQDVNNLETLLL 132
Query: 196 SNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPA 255
SN L + F + L+ L L GN L V L L +L+L N G + L
Sbjct: 133 SNNQLVQ-IQPAQFSQFSNLKELQLYGNNLEYIPEGV-FDHLVGLTKLNLGNNGFTHLSP 190
Query: 256 NTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTL 315
F LQ L + N L D L +L+ L + + + +S F +L+ L
Sbjct: 191 RVFQHLGNLQVLRLYENRLSDIPMGTFDALGNLQELALQENQIGTLSPGLFHNNRNLQRL 250
Query: 316 ILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHV 375
LS N + L G+F L HL+ L L L L+ VF P+L EL L N +
Sbjct: 251 YLSNNHISHLPPGIFMQLPHLNKLTLFGNSLKELSPGVFGP---MPNLRELWLYNNHITS 307
Query: 376 LPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTYPDLEELRLSGNPLHVLPTG 435
LPD+ + LN+ L+ L LS N L + G
Sbjct: 308 LPDNAFSH---------------------LNQ-----------LQVLILSHNQLSYISPG 335
Query: 436 NLLPPQLSRLRSLDLSRCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSFQFLDVLLE 495
L+ LR L L + L NVF + N+ +++L NN L F ++ L+
Sbjct: 336 AF--NGLTNLRELSLHTNALQDLDGNVFRSLANLRNVSLQNNRLRQLPGSIFANVNGLMT 393
Query: 496 LESLDLSNNNLTHISPTVLRHNRAITSIKLVGNPWKCDCNIADMWEWATREKGDIGVLVG 555
++ L NNNL ++ + H + ++L NPW+CD NI + +W + +G
Sbjct: 394 IQ---LQNNNLENLPLGIFDHLGNLCELRLYDNPWRCDSNILPLHDWLILNRARLGT--- 447
Query: 556 STTPTEIGFGASRKKKGLVCYFDIFTTPTRKRP 588
T P AS + + LV F P+ + P
Sbjct: 448 DTLPV-CSSPASVRGQSLVIINVNFPGPSVQGP 479
>sp|Q8R5M3|LRC15_RAT Leucine-rich repeat-containing protein 15 OS=Rattus norvegicus
GN=Lrrc15 PE=2 SV=1
Length = 578
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 110/356 (30%), Positives = 163/356 (45%), Gaps = 10/356 (2%)
Query: 18 GLITINLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPL 76
LI + + N + + GAF SL YL + L + + F ++ L L LS N L
Sbjct: 78 ALIALKMEKNELSTIMPGAFRNLGSLRYLSLANNKLRMLPIRVFQDVNNLESLLLSNNQL 137
Query: 77 RIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGN 136
I+P F ++L L L+ NL I AFD+L L L L +N +H+ L +
Sbjct: 138 VQIQPAQFSQFSNLRELQLHGNNLESIPEEAFDHLVGLTKLNLGRNSF-THLSPRL-FQH 195
Query: 137 LGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLS 196
LG L L L ++ +S++P F L+ L L EN++ L + L N +L L LS
Sbjct: 196 LGNLQVLRLHENRLSDIPMGTFDALGNLQELALQENQIGTL--SPGLFHNNRNLQRLYLS 253
Query: 197 NCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPAN 256
N H+ L F+ +L L L GN L V P+ L L L N ++ L N
Sbjct: 254 NNHISQ-LPPGIFMQLPQLNKLTLFGNSLRELSPGV-FGPMPNLRELWLYNNHITSLADN 311
Query: 257 TFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLI 316
TF LQ L +SHN L + L +L L + + LQ + + F + +L+ +
Sbjct: 312 TFSHLNQLQVLILSHNQLTYISPGAFNGLTNLRELSLHTNALQDLDSNVFRSLANLQNIS 371
Query: 317 LSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNP 372
L N+L L +F N+ L+ ++L N L L +F +L ELRL NP
Sbjct: 372 LQSNRLRQLPGSIFANVNGLTTIQLQNNNLENLPLGIFDH---LVNLCELRLYDNP 424
Score = 102 bits (254), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 127/446 (28%), Positives = 197/446 (44%), Gaps = 48/446 (10%)
Query: 33 EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEY 92
E FL +L+ L M++ LS I P F NL +L L L+ N LR++ VF + +LE
Sbjct: 70 ENLFLNISALIALKMEKNELSTIMPGAFRNLGSLRYLSLANNKLRMLPIRVFQDVNNLES 129
Query: 93 LMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISN 152
L+L+ L I P+ F ++L+ L+L N L+S + +L L L+L ++ ++
Sbjct: 130 LLLSNNQLVQIQPAQFSQFSNLRELQLHGNNLESIPEE--AFDHLVGLTKLNLGRNSFTH 187
Query: 153 LPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNA 212
L +F + L+ L L EN L D+ + T L +L L L + G LS F N
Sbjct: 188 LSPRLFQHLGNLQVLRLHENRLSDIPMGTF--DALGNLQELALQENQI-GTLSPGLFHNN 244
Query: 213 TKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHN 272
L+ LYLS N +S+LP F + L +L + N
Sbjct: 245 RNLQRLYLSNN-------------------------HISQLPPGIFMQLPQLNKLTLFGN 279
Query: 273 PLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQN 332
L + + P+ +L L + +++ ++ +TF + L+ LILS N+L + G F
Sbjct: 280 SLRELSPGVFGPMPNLRELWLYNNHITSLADNTFSHLNQLQVLILSHNQLTYISPGAFNG 339
Query: 333 LTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQI 392
LT+L L L+ L L+ VF + +L+ + L N L LP S Q+
Sbjct: 340 LTNLRELSLHTNALQDLDSNVFR---SLANLQNISLQSNRLRQLPGSIFANVNGLTTIQL 396
Query: 393 WKNFDFLVILFILNETVFHENYTYPDLEELRLSGNPLH----VLPTGNLLPPQLSRLRSL 448
N + L I + V +L ELRL NP +LP N L +RL +
Sbjct: 397 QNNNLENLPLGIFDHLV--------NLCELRLYDNPWRCDSDILPLHNWLLLNRARLGTD 448
Query: 449 DLSRCKIDYLPPNVFNNTRNITSLNL 474
L C P NV + I ++N
Sbjct: 449 TLPVCSS---PANVRGQSLVIININF 471
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 117/451 (25%), Positives = 194/451 (43%), Gaps = 32/451 (7%)
Query: 142 TLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLK 201
+L + + I+ LP+N+F N + L L + +NEL + +NL L L L+N L+
Sbjct: 57 SLQVVNTHITELPENLFLNISALIALKMEKNELST--IMPGAFRNLGSLRYLSLANNKLR 114
Query: 202 GPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRF 261
L F + L +L LS N L + L L L L +P F
Sbjct: 115 M-LPIRVFQDVNNLESLLLSNNQLVQIQ-PAQFSQFSNLRELQLHGNNLESIPEEAFDHL 172
Query: 262 TCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNK 321
L +L++ N L L +L+ L + + L I TF + +L+ L L N+
Sbjct: 173 VGLTKLNLGRNSFTHLSPRLFQHLGNLQVLRLHENRLSDIPMGTFDALGNLQELALQENQ 232
Query: 322 LETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTK 381
+ TL GLF N +L L L+N +++L +F + P L +L L GN
Sbjct: 233 IGTLSPGLFHNNRNLQRLYLSNNHISQLPPGIFMQ---LPQLNKLTLFGN---------- 279
Query: 382 QYSMRTIPTQIWKNFDFLVILFILNETVFH-ENYTYPDLEELR---LSGNPLHVLPTGNL 437
S+R + ++ L L++ N + + T+ L +L+ LS N L + G
Sbjct: 280 --SLRELSPGVFGPMPNLRELWLYNNHITSLADNTFSHLNQLQVLILSHNQLTYISPGAF 337
Query: 438 LPPQLSRLRSLDLSRCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSFQFLDVLLELE 497
L+ LR L L + L NVF + N+ +++L +N L F ++ L
Sbjct: 338 --NGLTNLRELSLHTNALQDLDSNVFRSLANLQNISLQSNRLRQLPGSIFANVN---GLT 392
Query: 498 SLDLSNNNLTHISPTVLRHNRAITSIKLVGNPWKCDCNIADMWEWATREKGDIGVLVGST 557
++ L NNNL ++ + H + ++L NPW+CD +I + W + +G T
Sbjct: 393 TIQLQNNNLENLPLGIFDHLVNLCELRLYDNPWRCDSDILPLHNWLLLNRARLGT---DT 449
Query: 558 TPTEIGFGASRKKKGLVCYFDIFTTPTRKRP 588
P A+ + + LV F P+ + P
Sbjct: 450 LPV-CSSPANVRGQSLVIININFPGPSVQGP 479
>sp|Q9DBB9|CPN2_MOUSE Carboxypeptidase N subunit 2 OS=Mus musculus GN=Cpn2 PE=1 SV=2
Length = 547
Score = 102 bits (255), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 105/377 (27%), Positives = 163/377 (43%), Gaps = 65/377 (17%)
Query: 206 EDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQ 265
E AF T +RT SG+P L ++ N + L + F LQ
Sbjct: 58 ETAF---TTVRTRAFSGSP--------------NLTKVVFLNTQVRHLEPDAFGGLPRLQ 100
Query: 266 ELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETL 325
+L+I+ +P+ + + S L SLE L + + L + F M L++L L GN+L TL
Sbjct: 101 DLEITGSPVSNLSAHIFSNLSSLEKLTLDFDRLAGLPEDLFCHMDILESLQLQGNQLRTL 160
Query: 326 ESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDST----- 380
LFQ+L L L L LT+L + F + L+ L+LS N L LP+
Sbjct: 161 PGRLFQSLRDLRTLNLAQNLLTQLPKGAFQ---SLTGLQMLKLSNNMLARLPEGALGSLS 217
Query: 381 -------KQYSMRTIPTQIWKNFDFLVILFILNETVFH---------ENYTYPDLEE--- 421
++ + ++ L +L++ + + H N T+ L++
Sbjct: 218 SLQELFLDGNAITELSPHLFSQLFSLEMLWLQHNAICHLPVSLFSSLHNLTFLSLKDNAL 277
Query: 422 ----------------LRLSGNPLHVLPTGNLLPPQLSRLRSLDLSRCKIDYLPPNVFNN 465
L LS N L +P G LSRL SL LS I LP +VF N
Sbjct: 278 RTLPEGLFAHNQGLLHLSLSYNQLETIPEGAF--TNLSRLVSLTLSHNAITDLPEHVFRN 335
Query: 466 TRNITSLNLANNNLSMTSELSFQFLDVLLELESLDLSNNNLTHISPTVLRHNRAITSIKL 525
+ L+L +NNL+ F L L+ L+LS N LT + + N + ++ L
Sbjct: 336 LEQLVKLSLDSNNLTALHPALFHNLS---RLQLLNLSRNQLTTLPGGIFDTNYDLFNLAL 392
Query: 526 VGNPWKCDCNIADMWEW 542
+GNPW+CDC+++ + W
Sbjct: 393 LGNPWQCDCHLSYLTSW 409
Score = 90.1 bits (222), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 96/330 (29%), Positives = 155/330 (46%), Gaps = 11/330 (3%)
Query: 49 ECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAF 108
E + + + F+ L K+ +R +EP F L L+ L + ++ +S F
Sbjct: 58 ETAFTTVRTRAFSGSPNLTKVVFLNTQVRHLEPDAFGGLPRLQDLEITGSPVSNLSAHIF 117
Query: 109 DNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLN 168
NL+ L+ L L ++L + + ++ L++L L+ + + LP +F + LR LN
Sbjct: 118 SNLSSLEKLTLDFDRLAGLPE--DLFCHMDILESLQLQGNQLRTLPGRLFQSLRDLRTLN 175
Query: 169 LAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAA 228
LA+N L L Q+L L L LSN ++ L E A + + L+ L+L GN ++
Sbjct: 176 LAQNLLTQLPKGAF--QSLTGLQMLKLSN-NMLARLPEGALGSLSSLQELFLDGNAIT-- 230
Query: 229 DLSVAL-KPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLES 287
+LS L L L L L++ + LP + F L L + N L L + +
Sbjct: 231 ELSPHLFSQLFSLEMLWLQHNAICHLPVSLFSSLHNLTFLSLKDNALRTLPEGLFAHNQG 290
Query: 288 LEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLT 347
L HL + Y+ L+ I F ++ L +L LS N + L +F+NL L L L++ LT
Sbjct: 291 LLHLSLSYNQLETIPEGAFTNLSRLVSLTLSHNAITDLPEHVFRNLEQLVKLSLDSNNLT 350
Query: 348 RLNETVFHENYTYPDLEELRLSGNPLHVLP 377
L+ +FH L+ L LS N L LP
Sbjct: 351 ALHPALFH---NLSRLQLLNLSRNQLTTLP 377
Score = 56.6 bits (135), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 102/229 (44%), Gaps = 26/229 (11%)
Query: 19 LITINLNANPI-QPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLR 77
L T+NL N + Q +GAF L L + L+++ +L++L +L L GN +
Sbjct: 171 LRTLNLAQNLLTQLPKGAFQSLTGLQMLKLSNNMLARLPEGALGSLSSLQELFLDGNAIT 230
Query: 78 IIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKS----------- 126
+ P +F L SLE L L + ++ S F +L++L L L N L++
Sbjct: 231 ELSPHLFSQLFSLEMLWLQHNAICHLPVSLFSSLHNLTFLSLKDNALRTLPEGLFAHNQG 290
Query: 127 --HIDWTL---------VLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELI 175
H+ + NL +L +L L + I++LP++VF N L L+L N L
Sbjct: 291 LLHLSLSYNQLETIPEGAFTNLSRLVSLTLSHNAITDLPEHVFRNLEQLVKLSLDSNNLT 350
Query: 176 DLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNP 224
L A L NL L L+LS L L F L L L GNP
Sbjct: 351 ALHPA--LFHNLSRLQLLNLSRNQLT-TLPGGIFDTNYDLFNLALLGNP 396
Score = 44.7 bits (104), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
Query: 16 NPGLITINLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGN 74
N GL+ ++L+ N ++ + EGAF L+ L + ++ + F NL L KL L N
Sbjct: 288 NQGLLHLSLSYNQLETIPEGAFTNLSRLVSLTLSHNAITDLPEHVFRNLEQLVKLSLDSN 347
Query: 75 PLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFD 109
L + P +F L+ L+ L L+R LT + FD
Sbjct: 348 NLTALHPALFHNLSRLQLLNLSRNQLTTLPGGIFD 382
>sp|P35859|ALS_RAT Insulin-like growth factor-binding protein complex acid labile
subunit OS=Rattus norvegicus GN=Igfals PE=1 SV=1
Length = 603
Score = 100 bits (248), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 135/531 (25%), Positives = 224/531 (42%), Gaps = 77/531 (14%)
Query: 45 LYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYIS 104
L++ LS I F NL++L+ L+L G+ LR +EP L +L YL L R L ++
Sbjct: 79 LWLDGNNLSSIPSAAFQNLSSLDFLNLQGSWLRSLEPQALLGLQNLYYLHLERNRLRNLA 138
Query: 105 PSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWL 164
F + + L ++ L G L L L+L + + LPD VF L
Sbjct: 139 VGLFTH-TPSLASLSLSSNLLGRLEEGLFQG-LSHLWDLNLGWNSLVVLPDTVFQGLGNL 196
Query: 165 RNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNP 224
L LA N+L L A G L L LDLS L+ + + FV+ +L+ LYL N
Sbjct: 197 HELVLAGNKLTYLQPALFCG--LGELRELDLSRNALRS-VKANVFVHLPRLQKLYLDRNL 253
Query: 225 LSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSP 284
++A L + L L L + ++ L +TF L L ++HN +
Sbjct: 254 ITAVAPGAFLG-MKALRWLDLSHNRVAGLMEDTFPGLLGLHVLRLAHNAIASLRPRTFKD 312
Query: 285 LESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNC 344
L LE L +G++ ++++ TF + L+ L L+ N++ + G F L +++V+
Sbjct: 313 LHFLEELQLGHNRIRQLGERTFEGLGQLEVLTLNDNQITEVRVGAFSGLFNVAVMN---- 368
Query: 345 GLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFI 404
LSGN +R++P ++++ D L L +
Sbjct: 369 -----------------------LSGN------------CLRSLPERVFQGLDKLHSLHL 393
Query: 405 LNETVFHEN-YTYPDLEELR---LSGNPLHVLPTGNLLPPQLSRLRSLDLSRCKIDYLPP 460
+ + H +T+ L LR L N + + +L LS L LDL+ ++ +LP
Sbjct: 394 EHSCLGHVRLHTFAGLSGLRRLFLRDNSISSIEEQSL--AGLSELLELDLTTNRLTHLPR 451
Query: 461 NVFNNTRNITSLNLANNNLSMTS-------------ELSFQFLDVLLE--------LESL 499
+F ++ L L+ N L+ S ++S L+ L E + L
Sbjct: 452 QLFQGLGHLEYLLLSYNQLTTLSAEVLGPLQRAFWLDISHNHLETLAEGLFSSLGRVRYL 511
Query: 500 DLSNNNLTHISPTVLRHNRAITSIKLVGNPWKCDCNIADMWEWATREKGDI 550
L NN+L SP + + L NPW C C + + ++A + G +
Sbjct: 512 SLRNNSLQTFSP-----QPGLERLWLDANPWDCSCPLKALRDFALQNPGVV 557
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 134/334 (40%), Gaps = 49/334 (14%)
Query: 216 RTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPL- 274
R L+L GN LS+ S A + L+ L L+L+ L L L L + N L
Sbjct: 77 RALWLDGNNLSSIP-SAAFQNLSSLDFLNLQGSWLRSLEPQALLGLQNLYYLHLERNRLR 135
Query: 275 ---IDAFT--------------------ALLSPLESLEHLDMGYSNLQRISRSTFLKMTS 311
+ FT L L L L++G+++L + + F + +
Sbjct: 136 NLAVGLFTHTPSLASLSLSSNLLGRLEEGLFQGLSHLWDLNLGWNSLVVLPDTVFQGLGN 195
Query: 312 LKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGN 371
L L+L+GNKL L+ LF L L L+L+ L + VF P L++L L N
Sbjct: 196 LHELVLAGNKLTYLQPALFCGLGELRELDLSRNALRSVKANVF---VHLPRLQKLYLDRN 252
Query: 372 PLHVLPDST---------KQYSMRTIPTQIWKNFDFLVILFIL----NETVFHENYTYPD 418
+ + S + + F L+ L +L N T+ D
Sbjct: 253 LITAVAPGAFLGMKALRWLDLSHNRVAGLMEDTFPGLLGLHVLRLAHNAIASLRPRTFKD 312
Query: 419 ---LEELRLSGNPLHVLPTGNLLPPQLSRLRSLDLSRCKIDYLPPNVFNNTRNITSLNLA 475
LEEL+L N + L G L +L L L+ +I + F+ N+ +NL+
Sbjct: 313 LHFLEELQLGHNRIRQL--GERTFEGLGQLEVLTLNDNQITEVRVGAFSGLFNVAVMNLS 370
Query: 476 NNNLSMTSELSFQFLDVLLELESLDLSNNNLTHI 509
N L E FQ LD +L SL L ++ L H+
Sbjct: 371 GNCLRSLPERVFQGLD---KLHSLHLEHSCLGHV 401
>sp|Q8TF66|LRC15_HUMAN Leucine-rich repeat-containing protein 15 OS=Homo sapiens GN=LRRC15
PE=1 SV=2
Length = 581
Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 106/364 (29%), Positives = 162/364 (44%), Gaps = 33/364 (9%)
Query: 33 EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRI-------------- 78
E FL +L+ L +++ LS+I P F NL +L L L+ N L++
Sbjct: 70 ESPFLNISALIALRIEKNELSRITPGAFRNLGSLRYLSLANNKLQVLPIGLFQGLDSLES 129
Query: 79 ----------IEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHI 128
I+P F ++L+ L L+ +L YI AFD+L L L L +N L +HI
Sbjct: 130 LLLSSNQLLQIQPAHFSQCSNLKELQLHGNHLEYIPDGAFDHLVGLTKLNLGKNSL-THI 188
Query: 129 DWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLV 188
V +LG L L L ++ ++++P F L+ L L +N++ L + L N
Sbjct: 189 S-PRVFQHLGNLQVLRLYENRLTDIPMGTFDGLVNLQELALQQNQIGLL--SPGLFHNNH 245
Query: 189 HLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNC 248
+L L LSN H+ L F+ +L L L GN L + P+ L L L +
Sbjct: 246 NLQRLYLSNNHISQ-LPPSVFMQLPQLNRLTLFGNSLKELSPGI-FGPMPNLRELWLYDN 303
Query: 249 GLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLK 308
+S LP N F LQ L +S N + + L L L + + LQ + + F
Sbjct: 304 HISSLPDNVFSNLRQLQVLILSRNQISFISPGAFNGLTELRELSLHTNALQDLDGNVFRM 363
Query: 309 MTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRL 368
+ +L+ + L N+L L +F N+ L ++L N L L +F L ELRL
Sbjct: 364 LANLQNISLQNNRLRQLPGNIFANVNGLMAIQLQNNQLENLPLGIFDH---LGKLCELRL 420
Query: 369 SGNP 372
NP
Sbjct: 421 YDNP 424
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 108/405 (26%), Positives = 165/405 (40%), Gaps = 60/405 (14%)
Query: 192 SLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLS 251
SL + N H+ L+E F+N + L L + N LS A + L L LSL N L
Sbjct: 57 SLQILNTHIT-ELNESPFLNISALIALRIEKNELSRITPG-AFRNLGSLRYLSLANNKLQ 114
Query: 252 RLPANTF----------------------HRFTC--LQELDISHNPLIDAFTALLSPLES 287
LP F H C L+EL + N L L
Sbjct: 115 VLPIGLFQGLDSLESLLLSSNQLLQIQPAHFSQCSNLKELQLHGNHLEYIPDGAFDHLVG 174
Query: 288 LEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLT 347
L L++G ++L IS F + +L+ L L N+L + G F L +L L L +
Sbjct: 175 LTKLNLGKNSLTHISPRVFQHLGNLQVLRLYENRLTDIPMGTFDGLVNLQELALQQNQIG 234
Query: 348 RLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNE 407
L+ +FH N+ +L+ L LS N + LP S +P Q+ + F L L+
Sbjct: 235 LLSPGLFHNNH---NLQRLYLSNNHISQLPPSV----FMQLP-QLNRLTLFGNSLKELSP 286
Query: 408 TVFHENYTYPDLEELRLSGNPLHVLPTGNLLPPQLSRLRSLDLSRCKIDYLPPNVFNNTR 467
+F P+L EL L N + LP L +L+ L LSR +I ++ P FN
Sbjct: 287 GIFGP---MPNLRELWLYDNHISSLPDNVF--SNLRQLQVLILSRNQISFISPGAFNGLT 341
Query: 468 NITSLNLANNNLSMTSELSFQFL----DVLLE-----------------LESLDLSNNNL 506
+ L+L N L F+ L ++ L+ L ++ L NN L
Sbjct: 342 ELRELSLHTNALQDLDGNVFRMLANLQNISLQNNRLRQLPGNIFANVNGLMAIQLQNNQL 401
Query: 507 THISPTVLRHNRAITSIKLVGNPWKCDCNIADMWEWATREKGDIG 551
++ + H + ++L NPW+CD +I + W + +G
Sbjct: 402 ENLPLGIFDHLGKLCELRLYDNPWRCDSDILPLRNWLLLNQPRLG 446
>sp|Q6P1C6|LRIG3_MOUSE Leucine-rich repeats and immunoglobulin-like domains protein 3
OS=Mus musculus GN=Lrig3 PE=1 SV=1
Length = 1117
Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 108/372 (29%), Positives = 175/372 (47%), Gaps = 39/372 (10%)
Query: 19 LITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGN---- 74
L + LN N ++ + ++ ++ L + + KI P+ +L LDLS N
Sbjct: 100 LQEVKLNNNELETIPNLGSISANIRQLSLAGNAIDKILPEQLEAFQSLETLDLSNNNISE 159
Query: 75 ------PLRI------------IEPGVFDPLTS-LEYLMLNRCNLTYISPSAFDNLNHLK 115
PL++ +EPG FD L S L L LNR ++ I P F L L+
Sbjct: 160 LRTAFPPLQLKYLYINNNRVSSMEPGYFDNLASTLLVLKLNRNRISAIPPKMF-KLPQLQ 218
Query: 116 TLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELI 175
LEL++NK+K ++D L LG L +L ++++G++ L D F + + L L N L
Sbjct: 219 HLELNRNKIK-NVD-GLTFQGLGALKSLKMQRNGVTKLMDGAFWGLSNMEVLQLDHNNLT 276
Query: 176 DLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALK 235
++ G L+ L L LS + +S DA+ KL L L+ N LS D S L
Sbjct: 277 EITKGWLYG--LLMLRELHLSQNAINR-ISPDAWEFCQKLSELDLTFNHLSRLDDSSFLG 333
Query: 236 PLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPL---IDAFTALLSPLESLEHLD 292
L+ L+ L + N +S + F T L+ LD+ +N + I+ + S L+ L L
Sbjct: 334 -LSLLNALHIGNNKVSYIADCAFRGLTSLKTLDLRNNEISWTIEDMSGAFSGLDRLRQLI 392
Query: 293 MGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELN------NCGL 346
+ + ++ I++ F + +L+ L LSGN + +L+S F + L L LN +C L
Sbjct: 393 LQGNRIRSITKKAFAGLDTLEHLDLSGNAIMSLQSNAFSQMKKLQQLHLNTSSLLCDCQL 452
Query: 347 TRLNETVFHENY 358
L + V N+
Sbjct: 453 RWLPQWVAENNF 464
Score = 60.1 bits (144), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 106/453 (23%), Positives = 177/453 (39%), Gaps = 95/453 (20%)
Query: 141 DTLDLRQSGISNLPDNVFANNTWLRNLNLAENELI---------------------DLDV 179
D LD + + LPD + A W+ L+L+ N L +L+
Sbjct: 56 DLLDCSRRRLVRLPDPLPA---WVTRLDLSHNRLSFIQTSSLSHLQSLQEVKLNNNELET 112
Query: 180 ATTLGQNLVHLDSLDLSNCHLKGPLSE--DAFVNATKLRTLYLSGNPLSAADLSVALKPL 237
LG ++ L L+ + L E +AF L TL LS N +S +L A PL
Sbjct: 113 IPNLGSISANIRQLSLAGNAIDKILPEQLEAF---QSLETLDLSNNNIS--ELRTAFPPL 167
Query: 238 TKLHRLSLRNCGLSRLPANTFHRF-TCLQELDISHNPLIDAFTALLSPLESLEHLDMGYS 296
+L L + N +S + F + L L ++ N I A + L L+HL++ +
Sbjct: 168 -QLKYLYINNNRVSSMEPGYFDNLASTLLVLKLNRN-RISAIPPKMFKLPQLQHLELNRN 225
Query: 297 NLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHE 356
++ + TF + +LK+L + N + L G F L+++ VL+L++ LT + +
Sbjct: 226 KIKNVDGLTFQGLGALKSLKMQRNGVTKLMDGAFWGLSNMEVLQLDHNNLTEITKGWL-- 283
Query: 357 NYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTY 416
Y L EL LS N ++ + ++ +
Sbjct: 284 -YGLLMLRELHLSQNAINRISPDAWEFCQK------------------------------ 312
Query: 417 PDLEELRLSGNPLHVLPTGNLLPPQLSRLRSLDLSRCKIDYLPPNVFNNTRNITSLNLAN 476
L EL L+ N L L + L LS L +L + K+ Y+ F ++ +L+L N
Sbjct: 313 --LSELDLTFNHLSRLDDSSFL--GLSLLNALHIGNNKVSYIADCAFRGLTSLKTLDLRN 368
Query: 477 NNLSMTSE---LSFQFLDVLLEL---------------------ESLDLSNNNLTHISPT 512
N +S T E +F LD L +L E LDLS N + +
Sbjct: 369 NEISWTIEDMSGAFSGLDRLRQLILQGNRIRSITKKAFAGLDTLEHLDLSGNAIMSLQSN 428
Query: 513 VLRHNRAITSIKLVGNPWKCDCNIADMWEWATR 545
+ + + L + CDC + + +W
Sbjct: 429 AFSQMKKLQQLHLNTSSLLCDCQLRWLPQWVAE 461
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 129/278 (46%), Gaps = 24/278 (8%)
Query: 85 DPLTS-LEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTL 143
DPL + + L L+ L++I S+ +L L+ ++L+ N+L++ + NLG + +
Sbjct: 70 DPLPAWVTRLDLSHNRLSFIQTSSLSHLQSLQEVKLNNNELET-------IPNLGSI-SA 121
Query: 144 DLRQSGISN------LPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSN 197
++RQ ++ LP+ + A + L L+L+ N + +L A + L L ++N
Sbjct: 122 NIRQLSLAGNAIDKILPEQLEAFQS-LETLDLSNNNISELRTAFPP----LQLKYLYINN 176
Query: 198 CHLKGPLSEDAFVN-ATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPAN 256
+ + F N A+ L L L+ N +SA + + L +L L L + +
Sbjct: 177 NRVSS-MEPGYFDNLASTLLVLKLNRNRISA--IPPKMFKLPQLQHLELNRNKIKNVDGL 233
Query: 257 TFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLI 316
TF L+ L + N + L ++E L + ++NL I++ + L+ L
Sbjct: 234 TFQGLGALKSLKMQRNGVTKLMDGAFWGLSNMEVLQLDHNNLTEITKGWLYGLLMLRELH 293
Query: 317 LSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVF 354
LS N + + ++ LS L+L L+RL+++ F
Sbjct: 294 LSQNAINRISPDAWEFCQKLSELDLTFNHLSRLDDSSF 331
>sp|P22792|CPN2_HUMAN Carboxypeptidase N subunit 2 OS=Homo sapiens GN=CPN2 PE=1 SV=3
Length = 545
Score = 96.3 bits (238), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 96/343 (27%), Positives = 152/343 (44%), Gaps = 48/343 (13%)
Query: 240 LHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQ 299
L ++ N L + + F L++L+++ + ++ T + S L SL L + ++ L+
Sbjct: 75 LTKVVFLNTQLCQFRPDAFGGLPRLEDLEVTGSSFLNLSTNIFSNLTSLGKLTLNFNMLE 134
Query: 300 RISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYT 359
+ F + +L++L L GN+L+ L LFQ LTHL L L L +L E +FH
Sbjct: 135 ALPEGLFQHLAALESLHLQGNQLQALPRRLFQPLTHLKTLNLAQNLLAQLPEELFHP--- 191
Query: 360 YPDLEELRLSGNPLHVLPDST------------KQYSMRTIPTQIWKNFDFLVILFILNE 407
L+ L+LS N L LP ++ +P Q++ L L++
Sbjct: 192 LTSLQTLKLSNNALSGLPQGVFGKLGSLQELFLDSNNISELPPQVFSQLFCLERLWLQRN 251
Query: 408 TVFH---------ENYTY-------------------PDLEELRLSGNPLHVLPTGNLLP 439
+ H N T+ P L L L+ N L + G
Sbjct: 252 AITHLPLSIFASLGNLTFLSLQWNMLRVLPAGLFAHTPCLVGLSLTHNQLETVAEGTF-- 309
Query: 440 PQLSRLRSLDLSRCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSFQFLDVLLELESL 499
LS LRSL LS I +LP +F + + L L +NNL+ FQ L +LE L
Sbjct: 310 AHLSNLRSLMLSYNAITHLPAGIFRDLEELVKLYLGSNNLTALHPALFQ---NLSKLELL 366
Query: 500 DLSNNNLTHISPTVLRHNRAITSIKLVGNPWKCDCNIADMWEW 542
LS N LT + + N + ++ L GNPW+CDC++A ++ W
Sbjct: 367 SLSKNQLTTLPEGIFDTNYNLFNLALHGNPWQCDCHLAYLFNW 409
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 105/340 (30%), Positives = 144/340 (42%), Gaps = 39/340 (11%)
Query: 60 FTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLEL 119
F+NLT+L KL L+ N L + G+F L +LE L L L + F L HLKTL L
Sbjct: 117 FSNLTSLGKLTLNFNMLEALPEGLFQHLAALESLHLQGNQLQALPRRLFQPLTHLKTLNL 176
Query: 120 SQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDV 179
+QN L + + L L TL L + +S LP VF L+ L L N + +L
Sbjct: 177 AQNLLAQLPEE--LFHPLTSLQTLKLSNNALSGLPQGVFGKLGSLQELFLDSNNISEL-- 232
Query: 180 ATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTK 239
F L L+L N ++ LS+ L
Sbjct: 233 -------------------------PPQVFSQLFCLERLWLQRNAITHLPLSI-FASLGN 266
Query: 240 LHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQ 299
L LSL+ L LPA F CL L ++HN L + L +L L + Y+ +
Sbjct: 267 LTFLSLQWNMLRVLPAGLFAHTPCLVGLSLTHNQLETVAEGTFAHLSNLRSLMLSYNAIT 326
Query: 300 RISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYT 359
+ F + L L L N L L LFQNL+ L +L L+ LT L E +F NY
Sbjct: 327 HLPAGIFRDLEELVKLYLGSNNLTALHPALFQNLSKLELLSLSKNQLTTLPEGIFDTNY- 385
Query: 360 YPDLEELRLSGNP------LHVLPDSTKQYSMRTIPTQIW 393
+L L L GNP L L + +QY+ R + Q +
Sbjct: 386 --NLFNLALHGNPWQCDCHLAYLFNWLQQYTDRLLNIQTY 423
Score = 57.0 bits (136), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 113/231 (48%), Gaps = 8/231 (3%)
Query: 13 NLDNPGLITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLS 72
NL + G +T+N N P EG F +L L++Q L + + F LT L L+L+
Sbjct: 119 NLTSLGKLTLNFNMLEALP-EGLFQHLAALESLHLQGNQLQALPRRLFQPLTHLKTLNLA 177
Query: 73 GNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTL 132
N L + +F PLTSL+ L L+ L+ + F L L+ L L N +
Sbjct: 178 QNLLAQLPEELFHPLTSLQTLKLSNNALSGLPQGVFGKLGSLQELFLDSNNISELPPQ-- 235
Query: 133 VLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDS 192
V L L+ L L+++ I++LP ++FA+ L L+L N L L L + L
Sbjct: 236 VFSQLFCLERLWLQRNAITHLPLSIFASLGNLTFLSLQWNMLRVLPAG--LFAHTPCLVG 293
Query: 193 LDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLS--AADLSVALKPLTKLH 241
L L++ L+ ++E F + + LR+L LS N ++ A + L+ L KL+
Sbjct: 294 LSLTHNQLET-VAEGTFAHLSNLRSLMLSYNAITHLPAGIFRDLEELVKLY 343
>sp|Q5TJ59|TLR3_BOVIN Toll-like receptor 3 OS=Bos taurus GN=TLR3 PE=2 SV=1
Length = 904
Score = 95.1 bits (235), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 167/594 (28%), Positives = 257/594 (43%), Gaps = 100/594 (16%)
Query: 17 PGLITINLNANPI-QPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNP 75
P L +NL N I Q + F+ +L L++ ++ KI F NL L KLDLS N
Sbjct: 100 PWLEILNLQHNEISQLSDKTFIFCMNLTELHLMSNSIQKIKNDPFKNLKNLIKLDLSHNG 159
Query: 76 LRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNH--LKTLELSQNKLKSHIDWTLV 133
L + G L +L+ L+L+ ++ ++P FD L + LK LELS N++K
Sbjct: 160 LSSTKLGTQLQLENLQELLLSNNKISSLTPGEFDFLGNSSLKRLELSSNQIKEFSPG--C 217
Query: 134 LGNLGKLDTLDLRQSGIS-NLPDNVF--ANNTWLRNLNLAENELIDLDVATTLGQNLVHL 190
LG+L L L + +S +L + + +NT + NL+L+ N+L + T G +L
Sbjct: 218 FHTLGELSGLSLNNAKLSPSLTEKLCLELSNTSIENLSLSSNQLDTISHTTFDGLKQTNL 277
Query: 191 DSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGL 250
+LDLS L+ + D+F L L L N + S + L+ L RL LR
Sbjct: 278 TTLDLSRNSLR-VMGNDSFAWLPHLEYLSLEYNNIEHLS-SRSFYGLSNLRRLDLR---- 331
Query: 251 SRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMT 310
+F R Q + ++ P ID F+ L+ LE+L+M +N I R+TF +
Sbjct: 332 -----RSFTR----QSISLTSLPKIDDFS--FQWLKCLEYLNMDDNNFPGIKRNTFTGLV 380
Query: 311 SLKT----------------------------LILSGNKLETLESGLFQNLTHLSVLELN 342
LK L L+ NK+ ++SG F L HL VL+L
Sbjct: 381 RLKFLSLSNSFSSLRTLTNETFLSLAGCPLLLLDLTKNKISKIQSGAFSWLGHLEVLDL- 439
Query: 343 NCGLTRLNETVFHENYTYPD---------LEELRLSGNPLHVLPDSTKQYSMRTIPTQIW 393
GL + + + + + D + L L+ N +P S ++ +R +
Sbjct: 440 --GLNEIGQELTGQEWRGLDNIVEIYLSYNKYLELTTNSFTSVP-SLQRLMLRRVAL--- 493
Query: 394 KNFDF----------LVILFILNETVFHEN----YTYPDLEELRLSGNPL-----HVLPT 434
KN D LVIL + N + + N LE L L N L H P
Sbjct: 494 KNVDCSPSPFRPLPNLVILDLSNNNIANINDELLKGLEKLEILDLQHNNLARLWKHANPG 553
Query: 435 GNLLPPQ----LSRLRSLDLSRCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSFQFL 490
G P Q L L L+L D +P F + R + S++L NNL++ + F
Sbjct: 554 G---PVQFLKGLFHLHILNLGSNGFDEIPVEAFKDLRELKSIDLGMNNLNILPQSVF--- 607
Query: 491 DVLLELESLDLSNNNLTHISPTVLRHN-RAITSIKLVGNPWKCDC-NIADMWEW 542
D + L+SL L N +T + TV R ++ + + NP+ C C +IA W
Sbjct: 608 DNQVSLKSLSLQKNLITSVQKTVFGPAFRNLSYLDMRFNPFDCTCESIAWFVNW 661
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 130/280 (46%), Gaps = 23/280 (8%)
Query: 238 TKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSN 297
T + L+L + L RLP F R++ L LD N + L L LE L++ ++
Sbjct: 52 TNITVLNLTHNQLRRLPPANFTRYSQLTTLDGGFNSISKLEPELCQSLPWLEILNLQHNE 111
Query: 298 LQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHEN 357
+ ++S TF+ +L L L N ++ +++ F+NL +L L+L++ GL+ T
Sbjct: 112 ISQLSDKTFIFCMNLTELHLMSNSIQKIKNDPFKNLKNLIKLDLSHNGLS---STKLGTQ 168
Query: 358 YTYPDLEELRLSGNPLHVLP----DSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHEN 413
+L+EL LS N + L D S++ + + +F + FH
Sbjct: 169 LQLENLQELLLSNNKISSLTPGEFDFLGNSSLKRLELSSNQIKEF-------SPGCFH-- 219
Query: 414 YTYPDLEELRLSGNPLHVLPTGNL-LPPQLSRLRSLDLSRCKIDYLPPNVFNNTR--NIT 470
T +L L L+ L T L L + + +L LS ++D + F+ + N+T
Sbjct: 220 -TLGELSGLSLNNAKLSPSLTEKLCLELSNTSIENLSLSSNQLDTISHTTFDGLKQTNLT 278
Query: 471 SLNLANNNLSMTSELSFQFLDVLLELESLDLSNNNLTHIS 510
+L+L+ N+L + SF +L LE L L NN+ H+S
Sbjct: 279 TLDLSRNSLRVMGNDSFAWLP---HLEYLSLEYNNIEHLS 315
>sp|P40197|GPV_HUMAN Platelet glycoprotein V OS=Homo sapiens GN=GP5 PE=1 SV=1
Length = 560
Score = 95.1 bits (235), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 130/511 (25%), Positives = 201/511 (39%), Gaps = 112/511 (21%)
Query: 64 TTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNK 123
T L + L G +++ F +T L+ LM++ +++ ++P F +L LKTL LS+NK
Sbjct: 50 TNLTHILLFGMGRGVLQSQSFSGMTVLQRLMISDSHISAVAPGTFSDLIKLKTLRLSRNK 109
Query: 124 LKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTL 183
I++LP + L L L N L +D +
Sbjct: 110 --------------------------ITHLPGALLDKMVLLEQLFLDHNALRGID--QNM 141
Query: 184 GQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRL 243
Q LV+L L L+ L L F N L+ L LSGN
Sbjct: 142 FQKLVNLQELALNQNQLDF-LPASLFTNLENLKLLDLSGN-------------------- 180
Query: 244 SLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISR 303
L+ LP L+ L + N L+ + LL+ L +L L ++++ I+
Sbjct: 181 -----NLTHLPKGLLGAQAKLERLLLHSNRLVSLDSGLLNSLGALTELQFHRNHIRSIAP 235
Query: 304 STFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDL 363
F ++ +L +L LS N L L S LF + +L++L L L L +F E L
Sbjct: 236 GAFDRLPNLSSLTLSRNHLAFLPSALFLHSHNLTLLTLFENPLAELPGVLFGE---MGGL 292
Query: 364 EELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFI--------LNETVFHENYT 415
+EL L+ + +RT+P ++N L L + L + F
Sbjct: 293 QELWLN------------RTQLRTLPAAAFRNLSRLRYLGVTLSPRLSALPQGAFQ---G 337
Query: 416 YPDLEELRLSGNPLHVLPTGNLLPPQLSRLRSLDLSRCKIDYLPPNVFNNTRNITSLNLA 475
+L+ L L N L LP G L L +LR + L R ++ LP +F RN++S
Sbjct: 338 LGELQVLALHSNGLTALPDGLL--RGLGKLRQVSLRRNRLRALPRALF---RNLSS---- 388
Query: 476 NNNLSMTSELSFQFLDVLLELESLDLSNNNLTHISPTVLRHNRAITSIKLVGNPWKCDCN 535
LES+ L +N L + V +T + L N W+CDC
Sbjct: 389 --------------------LESVQLDHNQLETLPGDVFGALPRLTEVLLGHNSWRCDCG 428
Query: 536 IADMWEWATREKGDIGVLVGSTTPTEIGFGA 566
+ W + G +G G P G GA
Sbjct: 429 LGPFLGWLRQHLGLVG---GEEPPRCAGPGA 456
Score = 73.9 bits (180), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 139/311 (44%), Gaps = 10/311 (3%)
Query: 62 NLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQ 121
+ L +L L N LR I+ +F L +L+ L LN+ L ++ S F NL +LK L+LS
Sbjct: 120 KMVLLEQLFLDHNALRGIDQNMFQKLVNLQELALNQNQLDFLPASLFTNLENLKLLDLSG 179
Query: 122 NKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVAT 181
N L +H+ L LG KL+ L L + + +L + + L L N + +A
Sbjct: 180 NNL-THLPKGL-LGAQAKLERLLLHSNRLVSLDSGLLNSLGALTELQFHRNHIR--SIAP 235
Query: 182 TLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLH 241
L +L SL LS HL L F+++ L L L NPL+ V + L
Sbjct: 236 GAFDRLPNLSSLTLSRNHLAF-LPSALFLHSHNLTLLTLFENPLAELP-GVLFGEMGGLQ 293
Query: 242 RLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAF-TALLSPLESLEHLDMGYSNLQR 300
L L L LPA F + L+ L ++ +P + A L L+ L + + L
Sbjct: 294 ELWLNRTQLRTLPAAAFRNLSRLRYLGVTLSPRLSALPQGAFQGLGELQVLALHSNGLTA 353
Query: 301 ISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTY 360
+ + L+ + L N+L L LF+NL+ L ++L++ L L VF
Sbjct: 354 LPDGLLRGLGKLRQVSLRRNRLRALPRALFRNLSSLESVQLDHNQLETLPGDVFG---AL 410
Query: 361 PDLEELRLSGN 371
P L E+ L N
Sbjct: 411 PRLTEVLLGHN 421
>sp|Q0PV50|TLR3_BOSTR Toll-like receptor 3 OS=Boselaphus tragocamelus GN=TLR3 PE=2 SV=1
Length = 904
Score = 94.0 bits (232), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 171/616 (27%), Positives = 268/616 (43%), Gaps = 96/616 (15%)
Query: 17 PGLITINLNANPI-QPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNP 75
P L +NL N I Q + F+ +L L++ ++ KI F NL L KLDLS N
Sbjct: 100 PWLEILNLQHNEISQLSDKTFVFCMNLTELHLMSNSIQKIQNDPFKNLKNLIKLDLSHNG 159
Query: 76 LRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNH--LKTLELSQNKLKSHIDWTLV 133
L + G L +L+ L+L+ ++ ++P D L + L+ LELS N++K
Sbjct: 160 LSSTKLGTQLQLENLQELLLSNNKISSLTPEELDFLGNSSLERLELSSNQIKEFSPG--C 217
Query: 134 LGNLGKLDTLDLRQSGIS-NLPDNVF--ANNTWLRNLNLAENELIDLDVATTLGQNLVHL 190
+GKL L L + +S +L + + +NT + NL+L+ N+L + T G +L
Sbjct: 218 FHAIGKLSGLSLNNAKLSPSLTEKLCLELSNTSIENLSLSSNQLDTISHTTFSGLKQTNL 277
Query: 191 DSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGL 250
+LDLS L+ + D+F L L L N + S + L+ L L+LR
Sbjct: 278 TTLDLSRSSLR-VMDNDSFAWLPHLEYLSLEYNNIEHLS-SRSFYGLSNLRHLNLR---- 331
Query: 251 SRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMT 310
+F R Q + ++ P ID F+ L+ LE+L+M +N I R+TF +
Sbjct: 332 -----WSFTR----QSISLTSLPKIDDFS--FQWLKCLEYLNMEDNNFPSIKRNTFTGLV 380
Query: 311 SLKT------------------LILSG----------NKLETLESGLFQNLTHLSVLELN 342
LK L L+G NK+ ++SG F L HL VL+L
Sbjct: 381 RLKFLSLSNSFSSLRTLTNETFLSLAGSPLLLLNLTKNKISKIQSGAFSWLGHLEVLDL- 439
Query: 343 NCGLTRLNETVFHENYTYPD-LEELRLSGNPLHVLPD-------STKQYSMRTIPTQ--- 391
GL + + + + + D + E+ LS N L S ++ +R + +
Sbjct: 440 --GLNEIGQELTGQEWRGLDNIVEIYLSYNKYLELTTNSFTSVPSLQRLMLRRVALKNVA 497
Query: 392 ----IWKNFDFLVILFILNETVFHEN----YTYPDLEELRLSGNPL-----HVLPTGNLL 438
++ LVIL + N + + N LE L L N L H P G
Sbjct: 498 CSPSPFRPLPNLVILDLSNNNIANVNDELLKGLEKLEILDLQHNNLARLWKHANPGG--- 554
Query: 439 PPQ----LSRLRSLDLSRCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSFQFLDVLL 494
P Q LS LR L+L D +P F + R + S++L NNL++ + F D +
Sbjct: 555 PVQFLKGLSHLRILNLGSNGFDEIPVEAFKDLRELKSIDLGMNNLNILPQSVF---DNQV 611
Query: 495 ELESLDLSNNNLTHISPTVLRHN-RAITSIKLVGNPWKCDC-NIADMWEWATREKGDIGV 552
L+SL L N +T + TV R ++ + + NP+ C C +IA W +I
Sbjct: 612 SLKSLSLQKNLITSVQKTVFGPAFRNLSYLDMRFNPFDCTCESIAWFVNWINSTHTNISE 671
Query: 553 L----VGSTTPTEIGF 564
L + +T P GF
Sbjct: 672 LSNHYLCNTPPQYHGF 687
Score = 42.4 bits (98), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 59/110 (53%)
Query: 238 TKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSN 297
T + L+L + L RLP F R++ L LD N + L L LE L++ ++
Sbjct: 52 TNITVLNLTHNQLRRLPPANFTRYSRLTILDGGFNSISKLEPELCQNLPWLEILNLQHNE 111
Query: 298 LQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLT 347
+ ++S TF+ +L L L N ++ +++ F+NL +L L+L++ GL+
Sbjct: 112 ISQLSDKTFVFCMNLTELHLMSNSIQKIQNDPFKNLKNLIKLDLSHNGLS 161
>sp|Q149C3|LIGO4_MOUSE Leucine-rich repeat and immunoglobulin-like domain containing-NOGO
receptor-interacting protein 4 OS=Mus musculus GN=Lingo4
PE=2 SV=2
Length = 593
Score = 93.2 bits (230), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 83/255 (32%), Positives = 122/255 (47%), Gaps = 9/255 (3%)
Query: 22 INLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIE 80
++L+ N + +E GAF +SLL L +Q L + P F+ LT L LDL N + +
Sbjct: 89 LDLSYNQLSTLEPGAFHGLQSLLTLRLQGNRLRIVGPGIFSGLTALTLLDLRLNQIVLFL 148
Query: 81 PGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKL 140
G F L SL+ L + +L +++P AF L L T+ L + L + L L L L
Sbjct: 149 DGAFSELGSLQQLEVGDNHLVFVAPGAFAGLAKLSTITLERCNLSTVPG--LALAQLPAL 206
Query: 141 DTLDLRQSGISNLPDNVFANNTWLRNLNLAE-NELIDLDVATTLGQNLVHLDSLDLSNCH 199
L LR+ I LP L+ L + L LD + +G N L SL ++ C+
Sbjct: 207 VALRLRELDIERLPAGALRGLGQLKELEIHHWPSLEALDPGSLVGLN---LSSLAITRCN 263
Query: 200 LKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFH 259
L + A + + LR L LS NP+SA + L PL +L L L L+ + A+ FH
Sbjct: 264 LSS-VPFQALHHLSFLRILDLSQNPISAIP-ARRLSPLVRLQELRLSGACLTSIAAHAFH 321
Query: 260 RFTCLQELDISHNPL 274
T LD++ N L
Sbjct: 322 GLTAFHLLDVADNAL 336
Score = 86.7 bits (213), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 135/301 (44%), Gaps = 26/301 (8%)
Query: 69 LDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHI 128
LDLSGN L ++ G+ L L+ L L+ L+ + P AF L L TL L N+L+ I
Sbjct: 65 LDLSGNRLWGLQRGMLSRLGQLQELDLSYNQLSTLEPGAFHGLQSLLTLRLQGNRLR--I 122
Query: 129 DWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLV 188
+ L L LDLR + I D F+ L+ L + +N L+ VA L
Sbjct: 123 VGPGIFSGLTALTLLDLRLNQIVLFLDGAFSELGSLQQLEVGDNHLVF--VAPGAFAGLA 180
Query: 189 HLDSLDLSNCHLKG----PLSEDAFVNATKLRTLYLSGNPLSA-------ADLSV----- 232
L ++ L C+L L++ + A +LR L + P A +L +
Sbjct: 181 KLSTITLERCNLSTVPGLALAQLPALVALRLRELDIERLPAGALRGLGQLKELEIHHWPS 240
Query: 233 --ALKPLT----KLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLE 286
AL P + L L++ C LS +P H + L+ LD+S NP+ LSPL
Sbjct: 241 LEALDPGSLVGLNLSSLAITRCNLSSVPFQALHHLSFLRILDLSQNPISAIPARRLSPLV 300
Query: 287 SLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGL 346
L+ L + + L I+ F +T+ L ++ N L+TLE F + L L L+ L
Sbjct: 301 RLQELRLSGACLTSIAAHAFHGLTAFHLLDVADNALQTLEETAFPSPDKLVTLRLSGNPL 360
Query: 347 T 347
T
Sbjct: 361 T 361
Score = 70.1 bits (170), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 127/316 (40%), Gaps = 64/316 (20%)
Query: 267 LDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLE 326
LD+S N L +LS L L+ LD+ Y+ L + F + SL TL L GN+L +
Sbjct: 65 LDLSGNRLWGLQRGMLSRLGQLQELDLSYNQLSTLEPGAFHGLQSLLTLRLQGNRLRIVG 124
Query: 327 SGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPD---LEELRLSGNPL-HVLPDS--- 379
G+F LT L++L+L RLN+ V + + + L++L + N L V P +
Sbjct: 125 PGIFSGLTALTLLDL------RLNQIVLFLDGAFSELGSLQQLEVGDNHLVFVAPGAFAG 178
Query: 380 --------TKQYSMRTIPTQIWKNFDFLVILFI---------------LNETVFHENYTY 416
++ ++ T+P LV L + L + E + +
Sbjct: 179 LAKLSTITLERCNLSTVPGLALAQLPALVALRLRELDIERLPAGALRGLGQLKELEIHHW 238
Query: 417 PDLEEL------------------RLSGNPLHVLPTGNLLPPQLSRLRSLDLSRCKIDYL 458
P LE L LS P L LS LR LDLS+ I +
Sbjct: 239 PSLEALDPGSLVGLNLSSLAITRCNLSSVPFQAL-------HHLSFLRILDLSQNPISAI 291
Query: 459 PPNVFNNTRNITSLNLANNNLSMTSELSFQFLDVLLELESLDLSNNNLTHISPTVLRHNR 518
P + + L L+ L+ + +F L LD+++N L + T
Sbjct: 292 PARRLSPLVRLQELRLSGACLTSIAAHAFHGLTA---FHLLDVADNALQTLEETAFPSPD 348
Query: 519 AITSIKLVGNPWKCDC 534
+ +++L GNP CDC
Sbjct: 349 KLVTLRLSGNPLTCDC 364
>sp|Q7Z2Q7|LRR70_HUMAN Leucine-rich repeat-containing protein 70 OS=Homo sapiens GN=LRRC70
PE=2 SV=1
Length = 622
Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 106/338 (31%), Positives = 153/338 (45%), Gaps = 43/338 (12%)
Query: 48 QECTLSKIN---------PQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRC 98
Q CT +IN P+ F T L L+GN + I L SL L L+
Sbjct: 37 QLCTGRQINCRNLGLSSIPKNFPESTVF--LYLTGNNISYINESELTGLHSLVALYLDNS 94
Query: 99 NLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVF 158
N+ Y+ P AF L HL L L+ N +K +D + G L L L L+ + +S +P VF
Sbjct: 95 NILYVYPKAFVQLRHLYFLFLNNNFIK-RLDPGIFKG-LLNLRNLYLQYNQVSFVPRGVF 152
Query: 159 ANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTL 218
+ ++ LNL N L L T +G +V L LDLSN ++ +SE F + L L
Sbjct: 153 NDLVSVQYLNLQRNRLTVLGSGTFVG--MVALRILDLSNNNILR-ISESGFQHLENLACL 209
Query: 219 YLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAF 278
YL N L+++P+N F L+ L +SHNP+
Sbjct: 210 YLGSN-------------------------NLTKVPSNAFEVLKSLRRLSLSHNPIEAIQ 244
Query: 279 TALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSV 338
L +LE+L + S ++ ++R F + +LK LILS N LE L S F L +L
Sbjct: 245 PFAFKGLANLEYLLLKNSRIRNVTRDGFSGINNLKHLILSHNDLENLNSDTFSLLKNLIY 304
Query: 339 LELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVL 376
L+L+ + ++ F EN L+ L LS N L L
Sbjct: 305 LKLDRNRIISIDNDTF-ENMG-ASLKILNLSFNNLTAL 340
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 121/269 (44%), Gaps = 7/269 (2%)
Query: 25 NANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVF 84
N+N + AF+ R L +L++ + +++P F L L L L N + + GVF
Sbjct: 93 NSNILYVYPKAFVQLRHLYFLFLNNNFIKRLDPGIFKGLLNLRNLYLQYNQVSFVPRGVF 152
Query: 85 DPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLD 144
+ L S++YL L R LT + F + L+ L+LS N + + +L L L
Sbjct: 153 NDLVSVQYLNLQRNRLTVLGSGTFVGMVALRILDLSNNNILRISESG--FQHLENLACLY 210
Query: 145 LRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPL 204
L + ++ +P N F LR L+L+ N + + G L +L+ L L N ++ +
Sbjct: 211 LGSNNLTKVPSNAFEVLKSLRRLSLSHNPIEAIQPFAFKG--LANLEYLLLKNSRIRN-V 267
Query: 205 SEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRF-TC 263
+ D F L+ L LS N L + S L L L L + + +TF
Sbjct: 268 TRDGFSGINNLKHLILSHNDLENLN-SDTFSLLKNLIYLKLDRNRIISIDNDTFENMGAS 326
Query: 264 LQELDISHNPLIDAFTALLSPLESLEHLD 292
L+ L++S N L +L PL SL HL
Sbjct: 327 LKILNLSFNNLTALHPRVLKPLSSLIHLQ 355
Score = 70.1 bits (170), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 150/332 (45%), Gaps = 30/332 (9%)
Query: 218 LYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDA 277
LYL+GN +S + S L L L L L N + + F + L L +++N +
Sbjct: 65 LYLTGNNISYINES-ELTGLHSLVALYLDNSNILYVYPKAFVQLRHLYFLFLNNNFIKRL 123
Query: 278 FTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLS 337
+ L +L +L + Y+ + + R F + S++ L L N+L L SG F + L
Sbjct: 124 DPGIFKGLLNLRNLYLQYNQVSFVPRGVFNDLVSVQYLNLQRNRLTVLGSGTFVGMVALR 183
Query: 338 VLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPD-------STKQYSMRTIPT 390
+L+L+N + R++E+ F +L L L N L +P S ++ S+ P
Sbjct: 184 ILDLSNNNILRISESGFQH---LENLACLYLGSNNLTKVPSNAFEVLKSLRRLSLSHNPI 240
Query: 391 QIWKNFDFLVILFILNETVFHENYTYPDLEELRLSGNPLHVLPTGNLLPPQLSRLRSLDL 450
+ + F F + +LE L L + + + ++ L+ L L
Sbjct: 241 EAIQPFAFKGL---------------ANLEYLLLKNSRIRNVTRDGF--SGINNLKHLIL 283
Query: 451 SRCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSFQFLDVLLELESLDLSNNNLTHIS 510
S ++ L + F+ +N+ L L N + +F+ + L++ L+LS NNLT +
Sbjct: 284 SHNDLENLNSDTFSLLKNLIYLKLDRNRIISIDNDTFENMGASLKI--LNLSFNNLTALH 341
Query: 511 PTVLRHNRAITSIKLVGNPWKCDCNIADMWEW 542
P VL+ ++ ++ NPW+C+C + + +W
Sbjct: 342 PRVLKPLSSLIHLQANSNPWECNCKLLGLRDW 373
>sp|Q6UY18|LIGO4_HUMAN Leucine-rich repeat and immunoglobulin-like domain-containing nogo
receptor-interacting protein 4 OS=Homo sapiens GN=LINGO4
PE=2 SV=1
Length = 593
Score = 90.9 bits (224), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 93/303 (30%), Positives = 134/303 (44%), Gaps = 33/303 (10%)
Query: 22 INLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIE 80
++L+ N + +E GAF +SLL L +Q L + P F+ L+ L LDL N + +
Sbjct: 89 LDLSYNQLSTLEPGAFHGLQSLLTLRLQGNRLRIMGPGVFSGLSALTLLDLRLNQIVLFL 148
Query: 81 PGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKL 140
G F L SL+ L + +L +++P AF L L TL L + L + L L L L
Sbjct: 149 DGAFGELGSLQKLEVGDNHLVFVAPGAFAGLAKLSTLTLERCNLSTVPG--LALARLPAL 206
Query: 141 DTLDLRQSGISNLPDNVFANNTWLRNLNLA-ENELIDLDVATTLGQNLVHLDSLDLSNCH 199
L LR+ I LP L+ L + L LD + +G N L SL ++ C+
Sbjct: 207 VALRLRELDIGRLPAGALRGLGQLKELEIHLWPSLEALDPGSLVGLN---LSSLAITRCN 263
Query: 200 LKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFH 259
L + A + + LR L LS NP+SA + L PL +L L L L+ + A+ FH
Sbjct: 264 LSS-VPFQALYHLSFLRVLDLSQNPISAIP-ARRLSPLVRLQELRLSGACLTSIAAHAFH 321
Query: 260 RFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSG 319
T LD++ N LQ + + F L TL LSG
Sbjct: 322 GLTAFHLLDVADN------------------------ALQTLEETAFPSPDKLVTLRLSG 357
Query: 320 NKL 322
N L
Sbjct: 358 NPL 360
Score = 85.9 bits (211), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 133/301 (44%), Gaps = 26/301 (8%)
Query: 69 LDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHI 128
LDLSGN L ++ G+ L+ L+ L L+ L+ + P AF L L TL L N+L+ I
Sbjct: 65 LDLSGNRLWGLQQGMLSRLSLLQELDLSYNQLSTLEPGAFHGLQSLLTLRLQGNRLR--I 122
Query: 129 DWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLV 188
V L L LDLR + I D F L+ L + +N L+ VA L
Sbjct: 123 MGPGVFSGLSALTLLDLRLNQIVLFLDGAFGELGSLQKLEVGDNHLVF--VAPGAFAGLA 180
Query: 189 HLDSLDLSNCHLKG----PLSEDAFVNATKLRTLYLSGNPLSA-------ADLSVALKPL 237
L +L L C+L L+ + A +LR L + P A +L + L P
Sbjct: 181 KLSTLTLERCNLSTVPGLALARLPALVALRLRELDIGRLPAGALRGLGQLKELEIHLWPS 240
Query: 238 TK-----------LHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLE 286
+ L L++ C LS +P + + L+ LD+S NP+ LSPL
Sbjct: 241 LEALDPGSLVGLNLSSLAITRCNLSSVPFQALYHLSFLRVLDLSQNPISAIPARRLSPLV 300
Query: 287 SLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGL 346
L+ L + + L I+ F +T+ L ++ N L+TLE F + L L L+ L
Sbjct: 301 RLQELRLSGACLTSIAAHAFHGLTAFHLLDVADNALQTLEETAFPSPDKLVTLRLSGNPL 360
Query: 347 T 347
T
Sbjct: 361 T 361
Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 127/316 (40%), Gaps = 64/316 (20%)
Query: 267 LDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLE 326
LD+S N L +LS L L+ LD+ Y+ L + F + SL TL L GN+L +
Sbjct: 65 LDLSGNRLWGLQQGMLSRLSLLQELDLSYNQLSTLEPGAFHGLQSLLTLRLQGNRLRIMG 124
Query: 327 SGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDL---EELRLSGNPL-HVLPDS--- 379
G+F L+ L++L+L RLN+ V + + +L ++L + N L V P +
Sbjct: 125 PGVFSGLSALTLLDL------RLNQIVLFLDGAFGELGSLQKLEVGDNHLVFVAPGAFAG 178
Query: 380 --------TKQYSMRTIPTQIWKNFDFLVILFI---------------LNETVFHENYTY 416
++ ++ T+P LV L + L + E + +
Sbjct: 179 LAKLSTLTLERCNLSTVPGLALARLPALVALRLRELDIGRLPAGALRGLGQLKELEIHLW 238
Query: 417 PDLEEL------------------RLSGNPLHVLPTGNLLPPQLSRLRSLDLSRCKIDYL 458
P LE L LS P L LS LR LDLS+ I +
Sbjct: 239 PSLEALDPGSLVGLNLSSLAITRCNLSSVPFQALY-------HLSFLRVLDLSQNPISAI 291
Query: 459 PPNVFNNTRNITSLNLANNNLSMTSELSFQFLDVLLELESLDLSNNNLTHISPTVLRHNR 518
P + + L L+ L+ + +F L LD+++N L + T
Sbjct: 292 PARRLSPLVRLQELRLSGACLTSIAAHAFHGLTAF---HLLDVADNALQTLEETAFPSPD 348
Query: 519 AITSIKLVGNPWKCDC 534
+ +++L GNP CDC
Sbjct: 349 KLVTLRLSGNPLTCDC 364
>sp|Q52KR2|LRIG2_MOUSE Leucine-rich repeats and immunoglobulin-like domains protein 2
OS=Mus musculus GN=Lrig2 PE=2 SV=1
Length = 1054
Score = 89.4 bits (220), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 100/344 (29%), Positives = 160/344 (46%), Gaps = 31/344 (9%)
Query: 17 PGLITINLNANPIQPVEG-AFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNP 75
P + ++L N I + AF + +L L + +S+I F ++ L L+LS N
Sbjct: 119 PNITLLSLVHNLIPEINAEAFELYSALESLDLSSNIISEIKTSSFPRMS-LKYLNLSNNR 177
Query: 76 LRIIEPGVFDPLT-SLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVL 134
+ +E G FD L+ SL + LNR ++ I P F L HL+ LEL +N++K I L
Sbjct: 178 ISTLEAGCFDNLSDSLLVVKLNRNRISMIPPKVF-KLPHLQFLELKRNRIK--IVEGLTF 234
Query: 135 GNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLD 194
L L +L ++++GIS L D F + L L N L ++ G L L L
Sbjct: 235 QGLDSLRSLKMQRNGISKLKDGAFFGLNNMEELELEHNNLTGVNKGWLYG--LRMLQQLY 292
Query: 195 LSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLP 254
+S ++ +S DA+ +L L LS N L+ D S A L+ L RL+L + ++ +
Sbjct: 293 MSQNAIE-KISPDAWEFCQRLSELDLSYNQLTRLDES-AFVGLSLLERLNLGDNRVTHIA 350
Query: 255 ANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKT 314
F + LQ LD+ +N + A +E +S L+ SL
Sbjct: 351 DGVFRFLSNLQTLDLRNNDISWA----------IEDASEAFSGLK-----------SLTK 389
Query: 315 LILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENY 358
LIL GN+++++ F L L L+LNN + + E F + +
Sbjct: 390 LILQGNRIKSVTQKAFIGLESLEYLDLNNNAIMSIQENAFSQTH 433
Score = 56.6 bits (135), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 118/258 (45%), Gaps = 27/258 (10%)
Query: 267 LDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLE 326
L + HN + + +LE LD+ + + I S+F +M SLK L LS N++ TLE
Sbjct: 124 LSLVHNLIPEINAEAFELYSALESLDLSSNIISEIKTSSFPRM-SLKYLNLSNNRISTLE 182
Query: 327 SGLFQNLT-HLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLP-------D 378
+G F NL+ L V++LN ++ + VF P L+ L L N + ++ D
Sbjct: 183 AGCFDNLSDSLLVVKLNRNRISMIPPKVFK----LPHLQFLELKRNRIKIVEGLTFQGLD 238
Query: 379 STKQYSMRTIPTQIWKNFDFLVILFILNETVFHEN---------YTYPDLEELRLSGNPL 429
S + M+ K+ F + + + H N Y L++L +S N +
Sbjct: 239 SLRSLKMQRNGISKLKDGAFFGLNNMEELELEHNNLTGVNKGWLYGLRMLQQLYMSQNAI 298
Query: 430 HVLPTGNLLPPQLSRLRSLDLSRCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSFQF 489
+ Q RL LDLS ++ L + F + LNL +N ++ ++ F+F
Sbjct: 299 EKISPDAWEFCQ--RLSELDLSYNQLTRLDESAFVGLSLLERLNLGDNRVTHIADGVFRF 356
Query: 490 LDVLLELESLDLSNNNLT 507
L L++LDL NN+++
Sbjct: 357 LS---NLQTLDLRNNDIS 371
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 82/173 (47%), Gaps = 4/173 (2%)
Query: 33 EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEY 92
+G R L LYM + + KI+P + L++LDLS N L ++ F L+ LE
Sbjct: 279 KGWLYGLRMLQQLYMSQNAIEKISPDAWEFCQRLSELDLSYNQLTRLDESAFVGLSLLER 338
Query: 93 LMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHI-DWTLVLGNLGKLDTLDLRQSGIS 151
L L +T+I+ F L++L+TL+L N + I D + L L L L+ + I
Sbjct: 339 LNLGDNRVTHIADGVFRFLSNLQTLDLRNNDISWAIEDASEAFSGLKSLTKLILQGNRIK 398
Query: 152 NLPDNVFANNTWLRNLNLAENELIDLD---VATTLGQNLVHLDSLDLSNCHLK 201
++ F L L+L N ++ + + T + LV S L +CHLK
Sbjct: 399 SVTQKAFIGLESLEYLDLNNNAIMSIQENAFSQTHLKGLVLNTSSLLCDCHLK 451
>sp|O08742|GPV_MOUSE Platelet glycoprotein V OS=Mus musculus GN=Gp5 PE=2 SV=1
Length = 567
Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 106/378 (28%), Positives = 161/378 (42%), Gaps = 38/378 (10%)
Query: 195 LSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLP 254
LS+ H+ + F + KL+TL L+ N +S ++ L + L +L L + L L
Sbjct: 81 LSDSHISA-IDPGTFNDLVKLKTLRLTRNKISRLPRAI-LDKMVLLEQLFLDHNALRDLD 138
Query: 255 ANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKT 314
N F + LQEL ++ N L L S L L+ LD+ +NL + + L+
Sbjct: 139 QNLFQQLRNLQELGLNQNQLSFLPANLFSSLRELKLLDLSRNNLTHLPKGLLGAQVKLEK 198
Query: 315 LILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLH 374
L+L N+L +++SGL NL L+ L L L + F +L L LSGN L
Sbjct: 199 LLLYSNQLTSVDSGLLSNLGALTELRLERNHLRSVAPGAFDR---LGNLSSLTLSGNLLE 255
Query: 375 VLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTYPDLEELRLSGNPLHVLPT 434
LP + + +++N L L + +F E L EL L+G L LP
Sbjct: 256 SLPPALFLHVSSVSRLTLFEN-----PLEELPDVLFGE---MAGLRELWLNGTHLSTLPA 307
Query: 435 GNLLPPQLSRLRSLDLSR-CKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSFQFLDVL 493
LS L++L L+R ++ LP VF R + L L N L+ + + + L L
Sbjct: 308 AAF--RNLSGLQTLGLTRNPRLSALPRGVFQGLRELRVLGLHTNALAELRDDALRGLGHL 365
Query: 494 LE---------------------LESLDLSNNNLTHISPTVLRHNRAITSIKLVGNPWKC 532
+ LES+ L +N L + V +T + L NPW C
Sbjct: 366 RQVSLRHNRLRALPRTLFRNLSSLESVQLEHNQLETLPGDVFAALPQLTQVLLGHNPWLC 425
Query: 533 DCNIADMWEWATREKGDI 550
DC + +W R DI
Sbjct: 426 DCGLWRFLQW-LRHHPDI 442
Score = 82.4 bits (202), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 93/322 (28%), Positives = 147/322 (45%), Gaps = 10/322 (3%)
Query: 52 LSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNL 111
+S++ + L +L L N LR ++ +F L +L+ L LN+ L+++ + F +L
Sbjct: 110 ISRLPRAILDKMVLLEQLFLDHNALRDLDQNLFQQLRNLQELGLNQNQLSFLPANLFSSL 169
Query: 112 NHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAE 171
LK L+LS+N L +H+ L LG KL+ L L + ++++ + +N L L L
Sbjct: 170 RELKLLDLSRNNL-THLPKGL-LGAQVKLEKLLLYSNQLTSVDSGLLSNLGALTELRLER 227
Query: 172 NELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLS 231
N L VA L +L SL LS L+ L F++ + + L L NPL
Sbjct: 228 NHLR--SVAPGAFDRLGNLSSLTLSGNLLES-LPPALFLHVSSVSRLTLFENPLEELP-D 283
Query: 232 VALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAF-TALLSPLESLEH 290
V + L L L LS LPA F + LQ L ++ NP + A + L L
Sbjct: 284 VLFGEMAGLRELWLNGTHLSTLPAAAFRNLSGLQTLGLTRNPRLSALPRGVFQGLRELRV 343
Query: 291 LDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLN 350
L + + L + + L+ + L N+L L LF+NL+ L ++L + L L
Sbjct: 344 LGLHTNALAELRDDALRGLGHLRQVSLRHNRLRALPRTLFRNLSSLESVQLEHNQLETLP 403
Query: 351 ETVFHENYTYPDLEELRLSGNP 372
VF P L ++ L NP
Sbjct: 404 GDVF---AALPQLTQVLLGHNP 422
Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 105/213 (49%), Gaps = 6/213 (2%)
Query: 14 LDNPGLIT-INLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDL 71
L N G +T + L N ++ V GAF +L L + L + P F +++++++L L
Sbjct: 214 LSNLGALTELRLERNHLRSVAPGAFDRLGNLSSLTLSGNLLESLPPALFLHVSSVSRLTL 273
Query: 72 SGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWT 131
NPL + +F + L L LN +L+ + +AF NL+ L+TL L++N S +
Sbjct: 274 FENPLEELPDVLFGEMAGLRELWLNGTHLSTLPAAAFRNLSGLQTLGLTRNPRLSALPRG 333
Query: 132 LVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLD 191
+ G L +L L L + ++ L D+ LR ++L N L L TL +NL L+
Sbjct: 334 VFQG-LRELRVLGLHTNALAELRDDALRGLGHLRQVSLRHNRLRAL--PRTLFRNLSSLE 390
Query: 192 SLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNP 224
S+ L + L+ L D F +L + L NP
Sbjct: 391 SVQLEHNQLET-LPGDVFAALPQLTQVLLGHNP 422
>sp|O08770|GPV_RAT Platelet glycoprotein V OS=Rattus norvegicus GN=Gp5 PE=3 SV=1
Length = 567
Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 153/360 (42%), Gaps = 54/360 (15%)
Query: 60 FTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLEL 119
F+ +T L +L LS + + I+PG F+ L L+ L L R ++++ + D + L+ L L
Sbjct: 70 FSGMTVLQRLMLSDSHISAIDPGTFNDLVKLKTLRLTRNKISHLPRAILDKMVLLEQLFL 129
Query: 120 SQNKLKSHIDWTL-----------------------VLGNLGKLDTLDLRQSGISNLPDN 156
N L+ +D L + +LGKL LDL ++ +++LP
Sbjct: 130 DHNALRD-LDQNLFQKLLNLRDLCLNQNQLSFLPANLFSSLGKLKVLDLSRNNLTHLPQG 188
Query: 157 VFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLR 216
+ L L L N L+ LD + L NL L L L HL+ ++ AF + L
Sbjct: 189 LLGAQIKLEKLLLYSNRLMSLD--SGLLANLGALTELRLERNHLRS-IAPGAFDSLGNLS 245
Query: 217 TLYLSGNPLSA------------ADLSVALKPLTK-----------LHRLSLRNCGLSRL 253
TL LSGN L + L++ PL + L L L L L
Sbjct: 246 TLTLSGNLLESLPPALFLHVSWLTRLTLFENPLEELPEVLFGEMAGLRELWLNGTHLRTL 305
Query: 254 PANTFHRFTCLQELDISHNPLIDAF-TALLSPLESLEHLDMGYSNLQRISRSTFLKMTSL 312
PA F + LQ L ++ NPL+ A + L L L + + L+ + + L
Sbjct: 306 PAAAFRNLSGLQTLGLTRNPLLSALPPGMFHGLTELRVLAVHTNALEELPEDALRGLGRL 365
Query: 313 KTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNP 372
+ + L N+L L LF+NL+ L ++L + L L VF P L + L NP
Sbjct: 366 RQVSLRHNRLRALPRTLFRNLSSLVTVQLEHNQLKTLPGDVF---AALPQLTRVLLGHNP 422
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 106/378 (28%), Positives = 161/378 (42%), Gaps = 43/378 (11%)
Query: 190 LDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCG 249
L L LS+ H+ + F + KL+TL L+ N +S ++ L + L +L L +
Sbjct: 76 LQRLMLSDSHISA-IDPGTFNDLVKLKTLRLTRNKISHLPRAI-LDKMVLLEQLFLDHNA 133
Query: 250 LSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKM 309
L L N F + L++L ++ N L L S L L+ LD+ +NL + +
Sbjct: 134 LRDLDQNLFQKLLNLRDLCLNQNQLSFLPANLFSSLGKLKVLDLSRNNLTHLPQGLLGAQ 193
Query: 310 TSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLS 369
L+ L+L N+L +L+SGL NL L+ L L L + F + +L L LS
Sbjct: 194 IKLEKLLLYSNRLMSLDSGLLANLGALTELRLERNHLRSIAPGAFD---SLGNLSTLTLS 250
Query: 370 GNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTYPDLEELRLSGNPL 429
GN L LP + + +++N L L E +F E L EL L+G L
Sbjct: 251 GNLLESLPPALFLHVSWLTRLTLFEN-----PLEELPEVLFGE---MAGLRELWLNGTHL 302
Query: 430 HVLPTGNLLPPQLSRLRSLDLSRCK-IDYLPPNVFNNTRNITSLNLANNNLSMTSELSFQ 488
LP LS L++L L+R + LPP +F+ + L + N L EL
Sbjct: 303 RTLPAAAF--RNLSGLQTLGLTRNPLLSALPPGMFHGLTELRVLAVHTNAL---EELPED 357
Query: 489 FLDVLLELESLDLSNNNLTHISPTVLR-----------HNR-------------AITSIK 524
L L L + L +N L + T+ R HN+ +T +
Sbjct: 358 ALRGLGRLRQVSLRHNRLRALPRTLFRNLSSLVTVQLEHNQLKTLPGDVFAALPQLTRVL 417
Query: 525 LVGNPWKCDCNIADMWEW 542
L NPW CDC + +W
Sbjct: 418 LGHNPWLCDCGLWPFLQW 435
Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 98/338 (28%), Positives = 156/338 (46%), Gaps = 26/338 (7%)
Query: 78 IIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNL 137
+++ F +T L+ LML+ +++ I P F++L LKTL L++NK+ SH+ +L +
Sbjct: 64 VLQSHSFSGMTVLQRLMLSDSHISAIDPGTFNDLVKLKTLRLTRNKI-SHLPRA-ILDKM 121
Query: 138 GKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENEL--IDLDVATTLGQNLVHLDSLDL 195
L+ L L + + +L N+F LR+L L +N+L + ++ ++LG+ L LDL
Sbjct: 122 VLLEQLFLDHNALRDLDQNLFQKLLNLRDLCLNQNQLSFLPANLFSSLGK----LKVLDL 177
Query: 196 SNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPA 255
S +L L + KL L L N L + D S L L L L L L +
Sbjct: 178 SRNNLTH-LPQGLLGAQIKLEKLLLYSNRLMSLD-SGLLANLGALTELRLERNHLRSIAP 235
Query: 256 NTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTL 315
F L L +S N L AL + L L + + L+ + F +M L+ L
Sbjct: 236 GAFDSLGNLSTLTLSGNLLESLPPALFLHVSWLTRLTLFENPLEELPEVLFGEMAGLREL 295
Query: 316 ILSGNKLETLESGLFQNLTHLSVLELN-NCGLTRLNETVFHENYTYPDLEELRLSGNPLH 374
L+G L TL + F+NL+ L L L N L+ L +FH +L L + N L
Sbjct: 296 WLNGTHLRTLPAAAFRNLSGLQTLGLTRNPLLSALPPGMFH---GLTELRVLAVHTNALE 352
Query: 375 VLPD------------STKQYSMRTIPTQIWKNFDFLV 400
LP+ S + +R +P +++N LV
Sbjct: 353 ELPEDALRGLGRLRQVSLRHNRLRALPRTLFRNLSSLV 390
Score = 59.7 bits (143), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 102/213 (47%), Gaps = 6/213 (2%)
Query: 14 LDNPGLIT-INLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDL 71
L N G +T + L N ++ + GAF +L L + L + P F +++ L +L L
Sbjct: 214 LANLGALTELRLERNHLRSIAPGAFDSLGNLSTLTLSGNLLESLPPALFLHVSWLTRLTL 273
Query: 72 SGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWT 131
NPL + +F + L L LN +L + +AF NL+ L+TL L++N L S +
Sbjct: 274 FENPLEELPEVLFGEMAGLRELWLNGTHLRTLPAAAFRNLSGLQTLGLTRNPLLSALPPG 333
Query: 132 LVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLD 191
+ G L +L L + + + LP++ LR ++L N L L TL +NL L
Sbjct: 334 MFHG-LTELRVLAVHTNALEELPEDALRGLGRLRQVSLRHNRLRAL--PRTLFRNLSSLV 390
Query: 192 SLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNP 224
++ L + LK L D F +L + L NP
Sbjct: 391 TVQLEHNQLKT-LPGDVFAALPQLTRVLLGHNP 422
>sp|Q9NYK1|TLR7_HUMAN Toll-like receptor 7 OS=Homo sapiens GN=TLR7 PE=1 SV=1
Length = 1049
Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 165/634 (26%), Positives = 260/634 (41%), Gaps = 120/634 (18%)
Query: 41 SLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRI-----------------IEPGV 83
+L LY+ ++KI F NL L LDLSGN R I
Sbjct: 226 TLTELYLYNNMIAKIQEDDFNNLNQLQILDLSGNCPRCYNAPFPCAPCKNNSPLQIPVNA 285
Query: 84 FDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTL 143
FD LT L+ L L+ +L ++ P F N+N L+ L+LSQN L I L L L L
Sbjct: 286 FDALTELKVLRLHSNSLQHVPPRWFKNINKLQELDLSQNFLAKEIGDAKFLHFLPSLIQL 345
Query: 144 DLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLG--------------QNLVH 189
DL N V+ + NL+ A + L L + G NL +
Sbjct: 346 DLS----FNFELQVYRASM---NLSQAFSSLKSLKILRIRGYVFKELKSFNLSPLHNLQN 398
Query: 190 LDSLDLSNCHLK-GPLSEDAFVNATKLRTLYLSGNPLSAADLSVAL-------------- 234
L+ LDL +K LS F +L+ + LS N +S + S +
Sbjct: 399 LEVLDLGTNFIKIANLS--MFKQFKRLKVIDLSVNKISPSGDSSEVGFCSNARTSVESYE 456
Query: 235 -KPLTKLHRLSL----RNCGLSRLPANTFH-RFTCL---QELDISHNPLIDAFTALLSPL 285
+ L +LH R+C A+ +C Q LD+S N + ++ L
Sbjct: 457 PQVLEQLHYFRYDKYARSCRFKNKEASFMSVNESCYKYGQTLDLSKNSIFFVKSSDFQHL 516
Query: 286 ESLEHLDMGYSNL--QRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNN 343
L+ L++ NL Q ++ S F + L+ L S N+L+ L S F+ L L VL++++
Sbjct: 517 SFLKCLNLS-GNLISQTLNGSEFQPLAELRYLDFSNNRLDLLHSTAFEELHKLEVLDISS 575
Query: 344 CGLTRLNETVFHE-NYT--YPDLEELRLSGNPLHVLPDSTKQ-YSMRTIPTQ------IW 393
+E + H N+T L++L ++ N + T + S+RT+ + +W
Sbjct: 576 NSHYFQSEGITHMLNFTKNLKVLQKLMMNDNDISSSTSRTMESESLRTLEFRGNHLDVLW 635
Query: 394 KNFDFLVILFILNETVFHENYTYPDLEELRLSGNPLHVLPTGNL--LPPQ---------- 441
+ D + N LEEL +S N L LP+G +PP
Sbjct: 636 REGDNRYLQLFKNLL---------KLEELDISKNSLSFLPSGVFDGMPPNLKNLSLAKNG 686
Query: 442 -----------LSRLRSLDLSRCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSFQFL 490
L L +LDLS ++ +P + N +R++ +L L NN + L+ FL
Sbjct: 687 LKSFSWKKLQCLKNLETLDLSHNQLTTVPERLSNCSRSLKNLILKNNQI---RSLTKYFL 743
Query: 491 DVLLELESLDLSNNNLTHISPTVLRHNRAITSIKLV---GNPWKCDCNIADMWEWATREK 547
+L LDLS+N + I T N + ++K++ N + C C+ W +
Sbjct: 744 QDAFQLRYLDLSSNKIQMIQKTSFPEN-VLNNLKMLLLHHNRFLCTCDAVWFVWWVNHTE 802
Query: 548 GDIGVLVGSTTPTEIGFGASRKKKGLVCYFDIFT 581
I L +T T +G GA + + V D++T
Sbjct: 803 VTIPYL--ATDVTCVGPGAHKGQS--VISLDLYT 832
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 126/504 (25%), Positives = 210/504 (41%), Gaps = 73/504 (14%)
Query: 54 KINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNH 113
+I P+ F+ LT L L L GN L I G+ SL+ L L N+ I L +
Sbjct: 117 QIKPRSFSGLTYLKSLYLDGNQLLEIPQGL---PPSLQLLSLEANNIFSIRKENLTELAN 173
Query: 114 LKTLELSQN---KLKSHIDWTL---VLGNLGKLDTLDLRQSGISNLPDNVFANNT--WLR 165
++ L L QN + ++ +++ NL KL L L+ + ++ +P + + T +L
Sbjct: 174 IEILYLGQNCYYRNPCYVSYSIEKDAFLNLTKLKVLSLKDNNVTAVPTVLPSTLTELYLY 233
Query: 166 NLNLAENELIDLDVATTLGQNLVHLDSLDLS-NC--HLKGPLSEDAFVNATKLRTLYLSG 222
N +A+ + D + NL L LDLS NC P N + L+
Sbjct: 234 NNMIAKIQEDDFN-------NLNQLQILDLSGNCPRCYNAPFPCAPCKNNSPLQI----- 281
Query: 223 NPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAF--TA 280
P++A D LT+L L L + L +P F LQELD+S N L
Sbjct: 282 -PVNAFD------ALTELKVLRLHSNSLQHVPPRWFKNINKLQELDLSQNFLAKEIGDAK 334
Query: 281 LLSPLESLEHLDMGYSNLQRISRST------FLKMTSLKTLILSGNKLETLES---GLFQ 331
L L SL LD+ ++ ++ R++ F + SLK L + G + L+S
Sbjct: 335 FLHFLPSLIQLDLSFNFELQVYRASMNLSQAFSSLKSLKILRIRGYVFKELKSFNLSPLH 394
Query: 332 NLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTK-------QYS 384
NL +L VL+L + N ++F + + L+ + LS N + DS++ + S
Sbjct: 395 NLQNLEVLDLGTNFIKIANLSMFKQ---FKRLKVIDLSVNKISPSGDSSEVGFCSNARTS 451
Query: 385 MRTIPTQIWKNFDFLVILFILNETVFHENYTYPDLEELRLSGNPLHVLPTGNLLPPQLSR 444
+ + Q+ + + + + + + E +S N G
Sbjct: 452 VESYEPQVLEQLHY------FRYDKYARSCRFKNKEASFMSVNE-SCYKYG--------- 495
Query: 445 LRSLDLSRCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSFQFLDVLLELESLDLSNN 504
++LDLS+ I ++ + F + + LNL+ N +S T L+ L EL LD SNN
Sbjct: 496 -QTLDLSKNSIFFVKSSDFQHLSFLKCLNLSGNLISQT--LNGSEFQPLAELRYLDFSNN 552
Query: 505 NLTHISPTVLRHNRAITSIKLVGN 528
L + T + + + N
Sbjct: 553 RLDLLHSTAFEELHKLEVLDISSN 576
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 101/402 (25%), Positives = 168/402 (41%), Gaps = 97/402 (24%)
Query: 103 ISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNT 162
ISP++F L+HL ++ N V LG + + +++ I F+ T
Sbjct: 80 ISPASFHRLDHLVEIDFRCN---------CVPIPLGSKNNMCIKRLQIK---PRSFSGLT 127
Query: 163 WLRNLNLAENELIDL----------------DVATTLGQNLVHLDSLDL----SNCHLKG 202
+L++L L N+L+++ ++ + +NL L ++++ NC+ +
Sbjct: 128 YLKSLYLDGNQLLEIPQGLPPSLQLLSLEANNIFSIRKENLTELANIEILYLGQNCYYRN 187
Query: 203 P------LSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPAN 256
P + +DAF+N TKL+ L L N ++A +V LT+L+ L N ++++ +
Sbjct: 188 PCYVSYSIEKDAFLNLTKLKVLSLKDNNVTAVP-TVLPSTLTELY---LYNNMIAKIQED 243
Query: 257 TFHRFTCLQELDISHN-------PLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKM 309
F+ LQ LD+S N P A SPL+ I + F +
Sbjct: 244 DFNNLNQLQILDLSGNCPRCYNAPFPCAPCKNNSPLQ--------------IPVNAFDAL 289
Query: 310 TSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTR-LNETVFHENYTYPDLEELRL 368
T LK L L N L+ + F+N+ L L+L+ L + + + F + P L +L L
Sbjct: 290 TELKVLRLHSNSLQHVPPRWFKNINKLQELDLSQNFLAKEIGDAKFL--HFLPSLIQLDL 347
Query: 369 SGN-PLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTYPDLEELRLSGN 427
S N L V Y +Q + + L IL I Y + +L+ LS
Sbjct: 348 SFNFELQV-------YRASMNLSQAFSSLKSLKILRI-------RGYVFKELKSFNLS-- 391
Query: 428 PLHVLPTGNLLP--------------PQLSRLRSLDLSRCKI 455
PLH L +L Q RL+ +DLS KI
Sbjct: 392 PLHNLQNLEVLDLGTNFIKIANLSMFKQFKRLKVIDLSVNKI 433
>sp|Q9NR96|TLR9_HUMAN Toll-like receptor 9 OS=Homo sapiens GN=TLR9 PE=1 SV=2
Length = 1032
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 145/491 (29%), Positives = 217/491 (44%), Gaps = 46/491 (9%)
Query: 45 LYMQECTLSKINPQFFTNLTTLNKLDLSGNPLR--IIEPGVFDPLTSLEYLMLN-----R 97
L +++ +LS +N +F L L LDLS N L I + F LT L L L+ R
Sbjct: 289 LVLKDSSLSWLNASWFRGLGNLRVLDLSENFLYKCITKTKAFQGLTQLRKLNLSFNYQKR 348
Query: 98 CNLTYIS-PSAFDNLNHLKTLELSQNKLKSHIDWTLV-LGNLGKLDTLDLRQSGISNLPD 155
+ ++S +F +L LK L++ +S + TL L L L TL L+ + I+
Sbjct: 349 VSFAHLSLAPSFGSLVALKELDMHGIFFRSLDETTLRPLARLPMLQTLRLQMNFINQAQL 408
Query: 156 NVFANNTWLRNLNLAENELIDL-DVATTLGQ----NLVHLDSLDLSNCHLKGPLSEDAFV 210
+F LR ++L++N + ++ T+G+ V L DL+ + P SED
Sbjct: 409 GIFRAFPGLRYVDLSDNRISGASELTATMGEADGGEKVWLQPGDLAPAPVDTPSSEDFRP 468
Query: 211 NATKLR-TLYLSGNPLSAADLSVALKPLTKLHRLSL-RNCGLSRLPANTFHRFTCLQELD 268
N + L TL LS N L + L+ L L L NC + + F T LQ LD
Sbjct: 469 NCSTLNFTLDLSRNNLVTVQPEM-FAQLSHLQCLRLSHNCISQAVNGSQFLPLTGLQVLD 527
Query: 269 ISHNPLIDAFTALLSPLESLEHLDMGYSN----LQRISR--STFLKMTSLKTLILSGNKL 322
+SHN L + L LE LD+ Y++ +Q + S + +L+ L L+ N +
Sbjct: 528 LSHNKLDLYHEHSFTELPRLEALDLSYNSQPFGMQGVGHNFSFVAHLRTLRHLSLAHNNI 587
Query: 323 ETLESGLFQNL--THLSVLELNNCGLTRL---NETVFHENYTYPDLEELRLSGNPLHVLP 377
+ S Q L T L L+ + L + + H L L LS N LH L
Sbjct: 588 HSQVS---QQLCSTSLRALDFSGNALGHMWAEGDLYLHFFQGLSGLIWLDLSQNRLHTLL 644
Query: 378 DSTKQYSMRTIPT--QIWKNFDFLVILFILNETVFHENYTYPDLEELRLSGNPLHVLPTG 435
T +R +P Q+ + D + F F P LE L L+GN L L G
Sbjct: 645 PQT----LRNLPKSLQVLRLRDNYLAFFKWWSLHF-----LPKLEVLDLAGNQLKALTNG 695
Query: 436 NLLPPQLSRLRSLDLSRCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSFQFLDVLLE 495
+L P +RLR LD+S I ++ P F+ + + LNL+ N L F L L+
Sbjct: 696 SL--PAGTRLRRLDVSCNSISFVAPGFFSKAKELRELNLSANALKTVDHSWFGPLASALQ 753
Query: 496 LESLDLSNNNL 506
+ LD+S N L
Sbjct: 754 I--LDVSANPL 762
Score = 40.8 bits (94), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 96/219 (43%), Gaps = 38/219 (17%)
Query: 138 GKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSN 197
G + +L L + I +L D+ FA+ LR+LNL N +G + +H
Sbjct: 63 GNVTSLSLSSNRIHHLHDSDFAHLPSLRHLNLKWN-------CPPVGLSPMHFP------ 109
Query: 198 CHLKGPLSEDAFVNATKLRTLYLSGN--------PLSAADLSVALKPLTKLHRLSLRNCG 249
CH+ + F+ L L LS N P S LS++ + L SL
Sbjct: 110 CHMT--IEPSTFLAVPTLEELNLSYNNIMTVPALPKSLISLSLSHTNILMLDSASLAGLH 167
Query: 250 LSR---LPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTF 306
R + N +++ C Q L+++ L+ L +L HL + Y+NL + R+
Sbjct: 168 ALRFLFMDGNCYYKNPCRQALEVAPGALLG--------LGNLTHLSLKYNNLTVVPRNL- 218
Query: 307 LKMTSLKTLILSGNKLETLESGLFQNLTHLSVLEL-NNC 344
+SL+ L+LS N++ L NLT L VL++ NC
Sbjct: 219 --PSSLEYLLLSYNRIVKLAPEDLANLTALRVLDVGGNC 255
Score = 37.4 bits (85), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 2/111 (1%)
Query: 18 GLITINLNANPIQPVEGAFL--VARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNP 75
GLI ++L+ N + + L + +SL L +++ L+ L L LDL+GN
Sbjct: 629 GLIWLDLSQNRLHTLLPQTLRNLPKSLQVLRLRDNYLAFFKWWSLHFLPKLEVLDLAGNQ 688
Query: 76 LRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKS 126
L+ + G T L L ++ ++++++P F L+ L LS N LK+
Sbjct: 689 LKALTNGSLPAGTRLRRLDVSCNSISFVAPGFFSKAKELRELNLSANALKT 739
>sp|Q3UVD5|LGR6_MOUSE Leucine-rich repeat-containing G-protein coupled receptor 6 OS=Mus
musculus GN=Lgr6 PE=2 SV=1
Length = 967
Score = 87.0 bits (214), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 160/336 (47%), Gaps = 39/336 (11%)
Query: 17 PGLITINLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNP 75
P L ++ L+AN I V E +F SL +L++ + L++I + NL L + L+ N
Sbjct: 138 PSLQSLRLDANLISLVPERSFEGLSSLRHLWLDDNALTEIPVRALNNLPALQAMTLALNH 197
Query: 76 LRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLG 135
+R I F LTSL L L+ + ++ +F+ L++L+TL+L+ N+L+ ++ L +
Sbjct: 198 IRHIPDYAFQNLTSLVVLHLHNNRIQHVGTHSFEGLHNLETLDLNYNELQ---EFPLAIR 254
Query: 136 NLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDL 195
LG+L L + I +P+ F + L+ ++ +N + +G++
Sbjct: 255 TLGRLQELGFHNNNIKAIPEKAFMGSPLLQTIHFYDNPI------QFVGRS--------- 299
Query: 196 SNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLS--VALKPLTKLHRLSLRNCGLSRL 253
AF +KL TL L+G A D+ LK T L L+L G+ L
Sbjct: 300 ------------AFQYLSKLHTLSLNG----ATDIQEFPDLKGTTSLEILTLTRAGIRLL 343
Query: 254 PANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLK 313
P + L+ L++SHN + + + L + LE + + ++ ++ I TF ++ SL+
Sbjct: 344 PPGVCQQLPRLRILELSHNQIEELPS--LHRCQKLEEIGLRHNRIKEIGADTFSQLGSLQ 401
Query: 314 TLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRL 349
L LS N + + F L L L+L + LT L
Sbjct: 402 ALDLSWNAIRAIHPEAFSTLRSLVKLDLTDNQLTTL 437
Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 111/414 (26%), Positives = 186/414 (44%), Gaps = 51/414 (12%)
Query: 69 LDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHI 128
LDLS N L ++PG+F L LE L L+ +L++I AF L+ LK L L N+L+
Sbjct: 71 LDLSMNNLTELQPGLFHHLRFLEELRLSGNHLSHIPGQAFSGLHSLKILMLQSNQLRGIP 130
Query: 129 DWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLV 188
L L L +L L + IS +P+ F + LR+L L +N L ++ V NL
Sbjct: 131 --AEALWELPSLQSLRLDANLISLVPERSFEGLSSLRHLWLDDNALTEIPVRAL--NNLP 186
Query: 189 HLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNC 248
L ++ L+ H++ + + AF N T L L+L N +++
Sbjct: 187 ALQAMTLALNHIRH-IPDYAFQNLTSLVVLHLHNN--------------------RIQHV 225
Query: 249 GLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLK 308
G ++F L+ LD+++N L + F + L L+ L +N++ I F+
Sbjct: 226 G-----THSFEGLHNLETLDLNYNELQE-FPLAIRTLGRLQELGFHNNNIKAIPEKAFMG 279
Query: 309 MTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRL 368
L+T+ N ++ + FQ L+ L L LN G T + E +PDL+
Sbjct: 280 SPLLQTIHFYDNPIQFVGRSAFQYLSKLHTLSLN--GATDIQE--------FPDLK---- 325
Query: 369 SGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETV--FHENYTYPDLEELRLSG 426
L +L + + +R +P + + L IL + + + + LEE+ L
Sbjct: 326 GTTSLEIL--TLTRAGIRLLPPGVCQQLPRLRILELSHNQIEELPSLHRCQKLEEIGLRH 383
Query: 427 NPLHVLPTGNLLPPQLSRLRSLDLSRCKIDYLPPNVFNNTRNITSLNLANNNLS 480
N + + QL L++LDLS I + P F+ R++ L+L +N L+
Sbjct: 384 NRIKEIGADTF--SQLGSLQALDLSWNAIRAIHPEAFSTLRSLVKLDLTDNQLT 435
Score = 73.6 bits (179), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 109/411 (26%), Positives = 179/411 (43%), Gaps = 43/411 (10%)
Query: 138 GKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSN 197
G + + D + G+S +P ++ +L +L+ N L +L L +L L+ L LS
Sbjct: 45 GIMLSADCSELGLSVVPADLDPLTAYL---DLSMNNLTELQ--PGLFHHLRFLEELRLSG 99
Query: 198 CHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANT 257
HL + AF L+ L L N L + AL L L L L +S +P +
Sbjct: 100 NHLSH-IPGQAFSGLHSLKILMLQSNQLRGIP-AEALWELPSLQSLRLDANLISLVPERS 157
Query: 258 FHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLIL 317
F + L+ L + N L + L+ L +L+ + + ++++ I F +TSL L L
Sbjct: 158 FEGLSSLRHLWLDDNALTEIPVRALNNLPALQAMTLALNHIRHIPDYAFQNLTSLVVLHL 217
Query: 318 SGNKLETLESGLFQNLTHLSVLELNNCGLT----------RLNETVFHENYTYPDLEELR 367
N+++ + + F+ L +L L+LN L RL E FH N + E
Sbjct: 218 HNNRIQHVGTHSFEGLHNLETLDLNYNELQEFPLAIRTLGRLQELGFHNN-NIKAIPEKA 276
Query: 368 LSGNPL----HVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTYPD----- 418
G+PL H D+ Q+ R+ F +L L L+ + +PD
Sbjct: 277 FMGSPLLQTIHFY-DNPIQFVGRSA-------FQYLSKLHTLSLNGATDIQEFPDLKGTT 328
Query: 419 -LEELRLSGNPLHVLPTGNLLPPQLSRLRSLDLSRCKIDYLPPNVFNNTRNITSLNLANN 477
LE L L+ + +LP G + QL RLR L+LS +I+ LP + + + + L +N
Sbjct: 329 SLEILTLTRAGIRLLPPG--VCQQLPRLRILELSHNQIEELP--SLHRCQKLEEIGLRHN 384
Query: 478 NLSMTSELSFQFLDVLLELESLDLSNNNLTHISPTVLRHNRAITSIKLVGN 528
+ E+ L L++LDLS N + I P R++ + L N
Sbjct: 385 RI---KEIGADTFSQLGSLQALDLSWNAIRAIHPEAFSTLRSLVKLDLTDN 432
>sp|Q6UXM1|LRIG3_HUMAN Leucine-rich repeats and immunoglobulin-like domains protein 3
OS=Homo sapiens GN=LRIG3 PE=2 SV=1
Length = 1119
Score = 86.7 bits (213), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 103/372 (27%), Positives = 171/372 (45%), Gaps = 39/372 (10%)
Query: 19 LITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPL-- 76
L + LN N ++ + V+ ++ L + + +I P+ +L LDLS N +
Sbjct: 100 LREVKLNNNELETIPNLGPVSANITLLSLAGNRIVEILPEHLKEFQSLETLDLSSNNISE 159
Query: 77 ------------------RI--IEPGVFDPLT-SLEYLMLNRCNLTYISPSAFDNLNHLK 115
R+ +EPG FD L +L L LNR ++ I P F L L+
Sbjct: 160 LQTAFPALQLKYLYLNSNRVTSMEPGYFDNLANTLLVLKLNRNRISAIPPKMF-KLPQLQ 218
Query: 116 TLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELI 175
LEL++NK+K ++D L LG L +L ++++G++ L D F + + L L N L
Sbjct: 219 HLELNRNKIK-NVD-GLTFQGLGALKSLKMQRNGVTKLMDGAFWGLSNMEILQLDHNNLT 276
Query: 176 DLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALK 235
++ G L+ L L LS + +S DA+ KL L L+ N LS D S L
Sbjct: 277 EITKGWLYG--LLMLQELHLSQNAIN-RISPDAWEFCQKLSELDLTFNHLSRLDDSSFLG 333
Query: 236 PLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPL---IDAFTALLSPLESLEHLD 292
L+ L+ L + N +S + F + L+ LD+ +N + I+ S L+ L L
Sbjct: 334 -LSLLNTLHIGNNRVSYIADCAFRGLSSLKTLDLKNNEISWTIEDMNGAFSGLDKLRRLI 392
Query: 293 MGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELN------NCGL 346
+ + ++ I++ F + +L+ L LS N + +L+ F + L L LN +C L
Sbjct: 393 LQGNRIRSITKKAFTGLDALEHLDLSDNAIMSLQGNAFSQMKKLQQLHLNTSSLLCDCQL 452
Query: 347 TRLNETVFHENY 358
L + V N+
Sbjct: 453 KWLPQWVAENNF 464
Score = 63.9 bits (154), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 118/275 (42%), Gaps = 14/275 (5%)
Query: 5 HPVYNDRRNLDNPGLITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLT 64
P Y D NL N L+ + LN N I + L +L + + ++ F L
Sbjct: 183 EPGYFD--NLANT-LLVLKLNRNRISAIPPKMFKLPQLQHLELNRNKIKNVDGLTFQGLG 239
Query: 65 TLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKL 124
L L + N + + G F L+++E L L+ NLT I+ L L+ L LSQN +
Sbjct: 240 ALKSLKMQRNGVTKLMDGAFWGLSNMEILQLDHNNLTEITKGWLYGLLMLQELHLSQNAI 299
Query: 125 K--SHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATT 182
S W KL LDL + +S L D+ F + L L++ N + +A
Sbjct: 300 NRISPDAWEFCQ----KLSELDLTFNHLSRLDDSSFLGLSLLNTLHIGNNRVS--YIADC 353
Query: 183 LGQNLVHLDSLDLSNCHLKGPLSE--DAFVNATKLRTLYLSGNPLSAADLSVALKPLTKL 240
+ L L +LDL N + + + AF KLR L L GN + + A L L
Sbjct: 354 AFRGLSSLKTLDLKNNEISWTIEDMNGAFSGLDKLRRLILQGNRIRSI-TKKAFTGLDAL 412
Query: 241 HRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLI 275
L L + + L N F + LQ+L ++ + L+
Sbjct: 413 EHLDLSDNAIMSLQGNAFSQMKKLQQLHLNTSSLL 447
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 99/452 (21%), Positives = 178/452 (39%), Gaps = 93/452 (20%)
Query: 141 DTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHL 200
D LD + ++ LP+ + +W+ L+L+ N L + ++ +L L + L+N L
Sbjct: 56 DLLDCSRKRLARLPEPL---PSWVARLDLSHNRLSFIKASSM--SHLQSLREVKLNNNEL 110
Query: 201 K-----GPLSE-----------------DAFVNATKLRTLYLSGNPLSAADLSVALKPLT 238
+ GP+S + L TL LS N +S +L A P
Sbjct: 111 ETIPNLGPVSANITLLSLAGNRIVEILPEHLKEFQSLETLDLSSNNIS--ELQTAF-PAL 167
Query: 239 KLHRLSLRNCGLSRLPANTFHRFT-CLQELDISHNPLIDAFTALLSPLESLEHLDMGYSN 297
+L L L + ++ + F L L ++ N I A + L L+HL++ +
Sbjct: 168 QLKYLYLNSNRVTSMEPGYFDNLANTLLVLKLNRN-RISAIPPKMFKLPQLQHLELNRNK 226
Query: 298 LQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHEN 357
++ + TF + +LK+L + N + L G F L+++ +L+L++ LT + +
Sbjct: 227 IKNVDGLTFQGLGALKSLKMQRNGVTKLMDGAFWGLSNMEILQLDHNNLTEITKGWL--- 283
Query: 358 YTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTYP 417
Y L+EL LS N ++ + ++ +
Sbjct: 284 YGLLMLQELHLSQNAINRISPDAWEFCQK------------------------------- 312
Query: 418 DLEELRLSGNPLHVLPTGNLLPPQLSRLRSLDLSRCKIDYLPPNVFNNTRNITSLNLANN 477
L EL L+ N L L + L LS L +L + ++ Y+ F ++ +L+L NN
Sbjct: 313 -LSELDLTFNHLSRLDDSSFL--GLSLLNTLHIGNNRVSYIADCAFRGLSSLKTLDLKNN 369
Query: 478 NLSMTSE---LSFQFLDVLLEL---------------------ESLDLSNNNLTHISPTV 513
+S T E +F LD L L E LDLS+N + +
Sbjct: 370 EISWTIEDMNGAFSGLDKLRRLILQGNRIRSITKKAFTGLDALEHLDLSDNAIMSLQGNA 429
Query: 514 LRHNRAITSIKLVGNPWKCDCNIADMWEWATR 545
+ + + L + CDC + + +W
Sbjct: 430 FSQMKKLQQLHLNTSSLLCDCQLKWLPQWVAE 461
Score = 43.1 bits (100), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 103/437 (23%), Positives = 170/437 (38%), Gaps = 91/437 (20%)
Query: 68 KLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNK---- 123
+LDLS N L I+ L SL + LN L I P+ ++ L L+ N+
Sbjct: 78 RLDLSHNRLSFIKASSMSHLQSLREVKLNNNELETI-PNLGPVSANITLLSLAGNRIVEI 136
Query: 124 LKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVA--T 181
L H L L+TLDL + IS L A L+ L L N + ++
Sbjct: 137 LPEH------LKEFQSLETLDLSSNNISELQTAFPA--LQLKYLYLNSNRVTSMEPGYFD 188
Query: 182 TLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLH 241
L L+ L L+ + P +L+ L L+ N + D + + L L
Sbjct: 189 NLANTLLVL-KLNRNRISAIPP----KMFKLPQLQHLELNRNKIKNVD-GLTFQGLGALK 242
Query: 242 RLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPL---------------- 285
L ++ G+++L F + ++ L + HN L + L L
Sbjct: 243 SLKMQRNGVTKLMDGAFWGLSNMEILQLDHNNLTEITKGWLYGLLMLQELHLSQNAINRI 302
Query: 286 --------ESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLS 337
+ L LD+ +++L R+ S+FL ++ L TL + N++ + F+ L+ L
Sbjct: 303 SPDAWEFCQKLSELDLTFNHLSRLDDSSFLGLSLLNTLHIGNNRVSYIADCAFRGLSSLK 362
Query: 338 VLELNNCGLTRLNETVFHENYTYPDLEELR---LSGNPLHVLPDSTKQYSMRTIPTQIWK 394
L+L N ++ T+ N + L++LR L GN +R+I + +
Sbjct: 363 TLDLKN---NEISWTIEDMNGAFSGLDKLRRLILQGN------------RIRSITKKAFT 407
Query: 395 NFDFLVILFILNETVFHENYTYPDLEELRLSGNPLHVLPTGNLLPPQLSRLRSLDLSR-- 452
D LE L LS N + L GN Q+ +L+ L L+
Sbjct: 408 GLDA--------------------LEHLDLSDNAIMSL-QGNAF-SQMKKLQQLHLNTSS 445
Query: 453 ----CKIDYLPPNVFNN 465
C++ +LP V N
Sbjct: 446 LLCDCQLKWLPQWVAEN 462
>sp|Q9HBX8|LGR6_HUMAN Leucine-rich repeat-containing G-protein coupled receptor 6 OS=Homo
sapiens GN=LGR6 PE=2 SV=3
Length = 967
Score = 86.3 bits (212), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 156/323 (48%), Gaps = 11/323 (3%)
Query: 17 PGLITINLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNP 75
P L ++ L+AN I V E +F SL +L++ + L++I + NL L + L+ N
Sbjct: 138 PSLQSLRLDANLISLVPERSFEGLSSLRHLWLDDNALTEIPVRALNNLPALQAMTLALNR 197
Query: 76 LRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLG 135
+ I F LTSL L L+ + ++ +F+ L++L+TL+L+ NKL+ ++ + +
Sbjct: 198 ISHIPDYAFQNLTSLVVLHLHNNRIQHLGTHSFEGLHNLETLDLNYNKLQ---EFPVAIR 254
Query: 136 NLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDL 195
LG+L L + I +P+ F N L+ ++ +N + V + Q L L +L L
Sbjct: 255 TLGRLQELGFHNNNIKAIPEKAFMGNPLLQTIHFYDNPI--QFVGRSAFQYLPKLHTLSL 312
Query: 196 SNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPA 255
+ + + ++ TL +G L + + + L +L L L + + LP
Sbjct: 313 NGAMDIQEFPDLKGTTSLEILTLTRAGIRLLPSGMC---QQLPRLRVLELSHNQIEELP- 368
Query: 256 NTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTL 315
+ HR L+E+ + HN + + S L SL+ LD+ ++ ++ I F + SL L
Sbjct: 369 -SLHRCQKLEEIGLQHNRIWEIGADTFSQLSSLQALDLSWNAIRSIHPEAFSTLHSLVKL 427
Query: 316 ILSGNKLETLESGLFQNLTHLSV 338
L+ N+L TL L HL +
Sbjct: 428 DLTDNQLTTLPLAGLGGLMHLKL 450
Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 110/414 (26%), Positives = 178/414 (42%), Gaps = 51/414 (12%)
Query: 69 LDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHI 128
LDLS N L ++PG+F L LE L L+ +L++I AF L LK L L N+L
Sbjct: 71 LDLSMNNLTELQPGLFHHLRFLEELRLSGNHLSHIPGQAFSGLYSLKILMLQNNQLGGIP 130
Query: 129 DWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLV 188
L L L +L L + IS +P+ F + LR+L L +N L ++ V
Sbjct: 131 --AEALWELPSLQSLRLDANLISLVPERSFEGLSSLRHLWLDDNALTEIPV--------- 179
Query: 189 HLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNC 248
A N L+ + L+ N +S A + LT L L L N
Sbjct: 180 ------------------RALNNLPALQAMTLALNRISHIP-DYAFQNLTSLVVLHLHNN 220
Query: 249 GLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLK 308
+ L ++F L+ LD+++N L + F + L L+ L +N++ I F+
Sbjct: 221 RIQHLGTHSFEGLHNLETLDLNYNKLQE-FPVAIRTLGRLQELGFHNNNIKAIPEKAFMG 279
Query: 309 MTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRL 368
L+T+ N ++ + FQ L L L LN G + E +PDL+
Sbjct: 280 NPLLQTIHFYDNPIQFVGRSAFQYLPKLHTLSLN--GAMDIQE--------FPDLK---- 325
Query: 369 SGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETV--FHENYTYPDLEELRLSG 426
L +L + + +R +P+ + + L +L + + + + LEE+ L
Sbjct: 326 GTTSLEIL--TLTRAGIRLLPSGMCQQLPRLRVLELSHNQIEELPSLHRCQKLEEIGLQH 383
Query: 427 NPLHVLPTGNLLPPQLSRLRSLDLSRCKIDYLPPNVFNNTRNITSLNLANNNLS 480
N + G QLS L++LDLS I + P F+ ++ L+L +N L+
Sbjct: 384 N--RIWEIGADTFSQLSSLQALDLSWNAIRSIHPEAFSTLHSLVKLDLTDNQLT 435
Score = 75.9 bits (185), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 110/411 (26%), Positives = 177/411 (43%), Gaps = 43/411 (10%)
Query: 138 GKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSN 197
G + + D + G+S +P ++ +L +L+ N L +L L +L L+ L LS
Sbjct: 45 GIMLSADCSELGLSAVPGDLDPLTAYL---DLSMNNLTELQ--PGLFHHLRFLEELRLSG 99
Query: 198 CHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANT 257
HL + AF L+ L L N L + AL L L L L +S +P +
Sbjct: 100 NHLSH-IPGQAFSGLYSLKILMLQNNQLGGIP-AEALWELPSLQSLRLDANLISLVPERS 157
Query: 258 FHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLIL 317
F + L+ L + N L + L+ L +L+ + + + + I F +TSL L L
Sbjct: 158 FEGLSSLRHLWLDDNALTEIPVRALNNLPALQAMTLALNRISHIPDYAFQNLTSLVVLHL 217
Query: 318 SGNKLETLESGLFQNLTHLSVLELNNCGLT----------RLNETVFHENYTYPDLEELR 367
N+++ L + F+ L +L L+LN L RL E FH N + E
Sbjct: 218 HNNRIQHLGTHSFEGLHNLETLDLNYNKLQEFPVAIRTLGRLQELGFHNN-NIKAIPEKA 276
Query: 368 LSGNPL----HVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTYPD----- 418
GNPL H D+ Q+ R+ F +L L L+ + +PD
Sbjct: 277 FMGNPLLQTIHFY-DNPIQFVGRSA-------FQYLPKLHTLSLNGAMDIQEFPDLKGTT 328
Query: 419 -LEELRLSGNPLHVLPTGNLLPPQLSRLRSLDLSRCKIDYLPPNVFNNTRNITSLNLANN 477
LE L L+ + +LP+G + QL RLR L+LS +I+ LP + + + + L +N
Sbjct: 329 SLEILTLTRAGIRLLPSG--MCQQLPRLRVLELSHNQIEELP--SLHRCQKLEEIGLQHN 384
Query: 478 NLSMTSELSFQFLDVLLELESLDLSNNNLTHISPTVLRHNRAITSIKLVGN 528
+ E+ L L++LDLS N + I P ++ + L N
Sbjct: 385 RI---WEIGADTFSQLSSLQALDLSWNAIRSIHPEAFSTLHSLVKLDLTDN 432
Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 102/255 (40%), Gaps = 19/255 (7%)
Query: 275 IDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLT 334
+ A L PL + +LD+ +NL + F + L+ L LSGN L + F L
Sbjct: 57 LSAVPGDLDPLTA--YLDLSMNNLTELQPGLFHHLRFLEELRLSGNHLSHIPGQAFSGLY 114
Query: 335 HLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWK 394
L +L L N L + E P L+ LRL N + ++P+ + + + +W
Sbjct: 115 SLKILMLQNNQLGGIPAEALWE---LPSLQSLRLDANLISLVPE--RSFEGLSSLRHLWL 169
Query: 395 NFDFLVILFILNETVFHENYTYPDLEELRLSGNPLHVLPTGNLLPPQLSRLRSLDLSRCK 454
+ + L E P L+ + L+ N + +P L+ L L L +
Sbjct: 170 DDN------ALTEIPVRALNNLPALQAMTLALNRISHIPDYAF--QNLTSLVVLHLHNNR 221
Query: 455 IDYLPPNVFNNTRNITSLNLANNNLSMTSELSFQFLDVLLELESLDLSNNNLTHISPTVL 514
I +L + F N+ +L+L N L E + L L+ L NNN+ I
Sbjct: 222 IQHLGTHSFEGLHNLETLDLNYNKLQ---EFPVA-IRTLGRLQELGFHNNNIKAIPEKAF 277
Query: 515 RHNRAITSIKLVGNP 529
N + +I NP
Sbjct: 278 MGNPLLQTIHFYDNP 292
>sp|O94898|LRIG2_HUMAN Leucine-rich repeats and immunoglobulin-like domains protein 2
OS=Homo sapiens GN=LRIG2 PE=2 SV=3
Length = 1065
Score = 86.3 bits (212), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 142/308 (46%), Gaps = 30/308 (9%)
Query: 52 LSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTS-LEYLMLNRCNLTYISPSAFDN 110
+S+I F + L L+LS N + +E G FD L+S L + LNR ++ I P F
Sbjct: 156 ISEIKTSSFPRMQ-LKYLNLSNNRITTLEAGCFDNLSSSLLVVKLNRNRMSMIPPKIF-K 213
Query: 111 LNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLA 170
L HL+ LEL +N++K I L L L +L ++++GIS L D F + L L
Sbjct: 214 LPHLQFLELKRNRIK--IVEGLTFQGLDSLRSLKMQRNGISKLKDGAFFGLNNMEELELE 271
Query: 171 ENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADL 230
N L ++ G L L L +S ++ +S DA+ +L L LS N L+ D
Sbjct: 272 HNNLTRVNKGWLYG--LRMLQQLYVSQNAIER-ISPDAWEFCQRLSELDLSYNQLTRLDE 328
Query: 231 SVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEH 290
S A L+ L RL+L + ++ + F + LQ LD+ +N + A
Sbjct: 329 S-AFVGLSLLERLNLGDNRVTHIADGVFRFLSNLQTLDLRNNEISWAIED---------- 377
Query: 291 LDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLN 350
+ F +TSL LIL GN+++++ F L L L+LNN + +
Sbjct: 378 -----------ASEAFAGLTSLTKLILQGNQIKSITKKAFIGLESLEHLDLNNNAIMSIQ 426
Query: 351 ETVFHENY 358
E F + +
Sbjct: 427 ENAFSQTH 434
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 131/307 (42%), Gaps = 58/307 (18%)
Query: 19 LITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRI 78
L+ + LN N +S I P+ F L L L+L N ++I
Sbjct: 194 LLVVKLNRN-----------------------RMSMIPPKIF-KLPHLQFLELKRNRIKI 229
Query: 79 IEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKL-KSHIDWTLVLGNL 137
+E F L SL L + R ++ + AF LN+++ LEL N L + + W L L
Sbjct: 230 VEGLTFQGLDSLRSLKMQRNGISKLKDGAFFGLNNMEELELEHNNLTRVNKGW---LYGL 286
Query: 138 GKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSN 197
L L + Q+ I + + + L L+L+ N+L LD + +G +L L+ L+L +
Sbjct: 287 RMLQQLYVSQNAIERISPDAWEFCQRLSELDLSYNQLTRLDESAFVGLSL--LERLNLGD 344
Query: 198 CHLKGPLSEDAFVNATKLRTLYLSGNPLSAA--DLSVALKPLTKLHRLSLRNCGLSRLPA 255
+ +++ F + L+TL L N +S A D S A LT L +L L+ + +
Sbjct: 345 NRVTH-IADGVFRFLSNLQTLDLRNNEISWAIEDASEAFAGLTSLTKLILQGNQIKSITK 403
Query: 256 NTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTL 315
F LESLEHLD+ + + I + F T LK L
Sbjct: 404 KAF------------------------IGLESLEHLDLNNNAIMSIQENAF-SQTHLKEL 438
Query: 316 ILSGNKL 322
IL+ + L
Sbjct: 439 ILNTSSL 445
Score = 60.1 bits (144), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 104/211 (49%), Gaps = 5/211 (2%)
Query: 17 PGLITINLNANPIQPVEG-AFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNP 75
P L + L N I+ VEG F SL L MQ +SK+ F L + +L+L N
Sbjct: 215 PHLQFLELKRNRIKIVEGLTFQGLDSLRSLKMQRNGISKLKDGAFFGLNNMEELELEHNN 274
Query: 76 LRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLG 135
L + G L L+ L +++ + ISP A++ L L+LS N+L + +D + +G
Sbjct: 275 LTRVNKGWLYGLRMLQQLYVSQNAIERISPDAWEFCQRLSELDLSYNQL-TRLDESAFVG 333
Query: 136 NLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENEL-IDLDVATTLGQNLVHLDSLD 194
L L+ L+L + ++++ D VF + L+ L+L NE+ ++ A+ L L L
Sbjct: 334 -LSLLERLNLGDNRVTHIADGVFRFLSNLQTLDLRNNEISWAIEDASEAFAGLTSLTKLI 392
Query: 195 LSNCHLKGPLSEDAFVNATKLRTLYLSGNPL 225
L +K +++ AF+ L L L+ N +
Sbjct: 393 LQGNQIKS-ITKKAFIGLESLEHLDLNNNAI 422
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 86/174 (49%), Gaps = 6/174 (3%)
Query: 33 EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEY 92
+G R L LY+ + + +I+P + L++LDLS N L ++ F L+ LE
Sbjct: 280 KGWLYGLRMLQQLYVSQNAIERISPDAWEFCQRLSELDLSYNQLTRLDESAFVGLSLLER 339
Query: 93 LMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHI-DWTLVLGNLGKLDTLDLRQSGIS 151
L L +T+I+ F L++L+TL+L N++ I D + L L L L+ + I
Sbjct: 340 LNLGDNRVTHIADGVFRFLSNLQTLDLRNNEISWAIEDASEAFAGLTSLTKLILQGNQIK 399
Query: 152 NLPDNVFANNTWLRNLNLAENELIDLD----VATTLGQNLVHLDSLDLSNCHLK 201
++ F L +L+L N ++ + T L + +++ SL L +CHLK
Sbjct: 400 SITKKAFIGLESLEHLDLNNNAIMSIQENAFSQTHLKELILNTSSL-LCDCHLK 452
Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 118/258 (45%), Gaps = 27/258 (10%)
Query: 267 LDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLE 326
L + HN + + L +LE LD+ + + I S+F +M LK L LS N++ TLE
Sbjct: 125 LSLVHNIIPEINAQALQFYPALESLDLSSNIISEIKTSSFPRM-QLKYLNLSNNRITTLE 183
Query: 327 SGLFQNLTH-LSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLP-------D 378
+G F NL+ L V++LN ++ + +F P L+ L L N + ++ D
Sbjct: 184 AGCFDNLSSSLLVVKLNRNRMSMIPPKIFK----LPHLQFLELKRNRIKIVEGLTFQGLD 239
Query: 379 STKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTYPD---------LEELRLSGNPL 429
S + M+ K+ F + + + H N T + L++L +S N +
Sbjct: 240 SLRSLKMQRNGISKLKDGAFFGLNNMEELELEHNNLTRVNKGWLYGLRMLQQLYVSQNAI 299
Query: 430 HVLPTGNLLPPQLSRLRSLDLSRCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSFQF 489
+ Q RL LDLS ++ L + F + LNL +N ++ ++ F+F
Sbjct: 300 ERISPDAWEFCQ--RLSELDLSYNQLTRLDESAFVGLSLLERLNLGDNRVTHIADGVFRF 357
Query: 490 LDVLLELESLDLSNNNLT 507
L L++LDL NN ++
Sbjct: 358 LS---NLQTLDLRNNEIS 372
>sp|O88279|SLIT1_RAT Slit homolog 1 protein OS=Rattus norvegicus GN=Slit1 PE=1 SV=1
Length = 1531
Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 144/611 (23%), Positives = 240/611 (39%), Gaps = 86/611 (14%)
Query: 19 LITINLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLR 77
+ I L N I+ + GAF R L + + +++I P F L +LN L L GN +
Sbjct: 311 MTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKIT 370
Query: 78 IIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNL 137
+ GVF L +L+ L+LN + I P AF +L +L L L NK++S T +L
Sbjct: 371 DLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFT--SL 428
Query: 138 GKLDTLDLRQSGISNLPDNVFANNTWLRNL-----------------NLAENELIDLDVA 180
+ TL L Q+ P N WL + LA + +
Sbjct: 429 RAIQTLHLAQN-----PFICDCNLKWLADFLRTNPIETTGARCASPRRLANKRIGQIKSK 483
Query: 181 T----------TLGQNLVHLDSLDLSN------CHLKGPLSEDAFVNATKL--------R 216
G HL+S S+ C + + E + + +K+
Sbjct: 484 KFRCSAKEQYFIPGTEDYHLNSECTSDVACPHKCRCEASVVECSGLKLSKIPERIPQSTT 543
Query: 217 TLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLID 276
L L+ N +S + + K L+ L +++L N +S + TF T + EL ++ N L
Sbjct: 544 ELRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGATSVSELHLTANQLES 603
Query: 277 AFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHL 336
+ + L+ L L + + + I +F + +++ L L N + T+ G F L L
Sbjct: 604 VRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDTLQAL 663
Query: 337 SVLEL------NNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPT 390
S L L NC L L + + ++GNP PD +Q ++ +
Sbjct: 664 STLNLLANPFNCNCQLAWLGDWLRKRKI---------VTGNPRCQNPDFLRQIPLQDVAF 714
Query: 391 QIWKNFDFLVILFILNETVFHENYTYPDLEELRLSGNPLHVLPTG--------------- 435
++ + + L + D +R S L LP G
Sbjct: 715 PDFRCEEGQEEVGCLPRPQCPQECACLDT-VVRCSNKHLQALPKGIPKNVTELYLDGNQF 773
Query: 436 NLLPPQLSRLRSL---DLSRCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSFQFLDV 492
L+P QLS + L DLS KI L + F N +T+L L+ N L L+FQ L
Sbjct: 774 TLVPGQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRS 833
Query: 493 LLELESLDLSNNNLTHISPTVLRHNRAITSIKLVGNPWKCDCNIADMWEWATREKGDIGV 552
L L N+++ + + +++ + + NP CDC++ + W + G+
Sbjct: 834 LRLLSL---HGNDVSTLQEGIFADVTSLSHLAIGANPLYCDCHLRWLSSWVKTGYKEPGI 890
Query: 553 LVGSTTPTEIG 563
+ P G
Sbjct: 891 ARCAGPPEMEG 901
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 126/538 (23%), Positives = 214/538 (39%), Gaps = 58/538 (10%)
Query: 7 VYNDRRNLDNPGLITINLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTT 65
++D + L+ + LN N +Q + E F ++L L + E +L + + F T
Sbjct: 104 AFDDMKELER-----LRLNRNQLQVLPELLFQNNQALSRLDLSENSLQAVPRKAFRGATD 158
Query: 66 LNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKL- 124
L L L N + IE G F L LE L LN N+T I S+F+++ L+T L N L
Sbjct: 159 LKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHLF 218
Query: 125 -KSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTL 183
H+ W + LRQ L + LR LN+AE + + +
Sbjct: 219 CDCHLAWL----------SQWLRQRPTIGLFTQC-SGPASLRGLNVAEVQKSEFSCSGQG 267
Query: 184 GQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRL 243
V +L +C P R L+ P A+L + + RL
Sbjct: 268 EAAQVPACTLSSGSC----PAMCSCSNGIVDCRGKGLTAIP---ANLPETMTEI----RL 316
Query: 244 SLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISR 303
L G+ +P F + L+ +D+S+N + + L SL L + + + + R
Sbjct: 317 ELN--GIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPR 374
Query: 304 STFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDL 363
F + +L+ L+L+ NK+ + FQ+L +LS+L L + + L + F + +
Sbjct: 375 GVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTF---TSLRAI 431
Query: 364 EELRLSGNP------LHVLPDSTKQYSMRTIPTQIWK-----NFDFLVILFILNETVFHE 412
+ L L+ NP L L D + + T + N I E
Sbjct: 432 QTLHLAQNPFICDCNLKWLADFLRTNPIETTGARCASPRRLANKRIGQIKSKKFRCSAKE 491
Query: 413 NYTYPDLEELRLSGNPLHVLPTGNLLPPQLSRLRS--LDLSRCKIDYLPPNVFNNTRNIT 470
Y P E+ L+ T ++ P R + ++ S K+ +P + +T T
Sbjct: 492 QYFIPGTEDYHLNSE-----CTSDVACPHKCRCEASVVECSGLKLSKIPERIPQST---T 543
Query: 471 SLNLANNNLSMTSELSFQFLDVLLELESLDLSNNNLTHISPTVLRHNRAITSIKLVGN 528
L L NN +S+ L L+ ++LSNN ++ I +++ + L N
Sbjct: 544 ELRLNNNEISILEATG--LFKKLSHLKKINLSNNKVSEIEDGTFEGATSVSELHLTAN 599
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 86/182 (47%), Gaps = 16/182 (8%)
Query: 390 TQIWKNFDFL------VILFILNETVFHENYTYPD---LEELRLSGNPLHVLPTGNLLPP 440
T+I KN DF V+ + N+ E + D LE LRL+ N L VLP LL
Sbjct: 74 TRIHKN-DFAGLKQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLQVLP--ELLFQ 130
Query: 441 QLSRLRSLDLSRCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSFQFLDVLLELESLD 500
L LDLS + +P F ++ +L L N +S E +F+ L LE L
Sbjct: 131 NNQALSRLDLSENSLQAVPRKAFRGATDLKNLQLDKNQISCIEEGAFR---ALRGLEVLT 187
Query: 501 LSNNNLTHISPTVLRHNRAITSIKLVGNPWKCDCNIADMWEWATREKGDIGVLVGSTTPT 560
L+NNN+T I + H + + +L N CDC++A + +W R++ IG+ + P
Sbjct: 188 LNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQW-LRQRPTIGLFTQCSGPA 246
Query: 561 EI 562
+
Sbjct: 247 SL 248
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 129/336 (38%), Gaps = 55/336 (16%)
Query: 204 LSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTC 263
+ ++ F +LR L L N + A + A + +L RL L L LP F
Sbjct: 76 IHKNDFAGLKQLRVLQLMENQIGAVERG-AFDDMKELERLRLNRNQLQVLPELLFQNNQA 134
Query: 264 LQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLE 323
L LD+S N +LQ + R F T LK L L N++
Sbjct: 135 LSRLDLSEN------------------------SLQAVPRKAFRGATDLKNLQLDKNQIS 170
Query: 324 TLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQY 383
+E G F+ L L VL LNN +T + + F+ P L RL N H+ D +
Sbjct: 171 CIEEGAFRALRGLEVLTLNNNNITTIPVSSFNH---MPKLRTFRLHSN--HLFCDCHLAW 225
Query: 384 ---SMRTIPT-QIWKNFDFLVILFILNETVFHENYTYPDLEELRLSGN------PLHVLP 433
+R PT ++ L LN ++ E SG P L
Sbjct: 226 LSQWLRQRPTIGLFTQCSGPASLRGLNVAEVQKS-------EFSCSGQGEAAQVPACTLS 278
Query: 434 TGNLLPPQLSRLRSLDLSRCK-IDYLPPNVFNNTRNITSLNLANNNLSMTSELSFQFLDV 492
+G+ P S + R K + +P N+ +T + L N + +F
Sbjct: 279 SGS-CPAMCSCSNGIVDCRGKGLTAIPANL---PETMTEIRLELNGIKSIPPGAF---SP 331
Query: 493 LLELESLDLSNNNLTHISPTVLRHNRAITSIKLVGN 528
+L +DLSNN + I+P + R++ S+ L GN
Sbjct: 332 YRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGN 367
>sp|Q7L0X0|TRIL_HUMAN TLR4 interactor with leucine rich repeats OS=Homo sapiens GN=TRIL
PE=1 SV=2
Length = 811
Score = 84.3 bits (207), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 94/309 (30%), Positives = 127/309 (41%), Gaps = 34/309 (11%)
Query: 42 LLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLT 101
L L +Q + ++P+ F L+ L +L L N L+ + PG PL L L N ++
Sbjct: 85 LRRLDLQYNQIRSLHPKTFEKLSRLEELYLGNNLLQALAPGTLAPLRKLRILYANGNEIS 144
Query: 102 YISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANN 161
+S +F+ L L L L N L + D V LG L L L + I L N FA
Sbjct: 145 RLSRGSFEGLESLVKLRLDGNALGALPD--AVFAPLGNLLYLHLESNRIRFLGKNAFAQL 202
Query: 162 TWLRNLNLAENELI-DLDVATTLGQNLVHLDSLDLSN--CHLKGPLSEDAFVNATKLRTL 218
LR LNL+ NEL L A T + +N HL GP
Sbjct: 203 GKLRFLNLSANELQPSLRHAATFAPLRSLSSLILSANNLQHL-GP--------------- 246
Query: 219 YLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAF 278
+ L +L LSLR L+ L F L+EL + N L
Sbjct: 247 -------------RIFQHLPRLGLLSLRGNQLTHLAPEAFWGLEALRELRLEGNRLSQLP 293
Query: 279 TALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSV 338
TALL PL SLE LD+ + L + +TF + L+ L L N L L +F L
Sbjct: 294 TALLEPLHSLEALDLSGNELSALHPATFGHLGRLRELSLRNNALSALSGDIFAASPALYR 353
Query: 339 LELNNCGLT 347
L+L+ G T
Sbjct: 354 LDLDGNGWT 362
Score = 80.5 bits (197), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 132/312 (42%), Gaps = 26/312 (8%)
Query: 237 LTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYS 296
L +L RL L+ + L TF + + L+EL + +N L L+PL L L +
Sbjct: 82 LGQLRRLDLQYNQIRSLHPKTFEKLSRLEELYLGNNLLQALAPGTLAPLRKLRILYANGN 141
Query: 297 NLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHE 356
+ R+SR +F + SL L L GN L L +F L +L L L + + L + F +
Sbjct: 142 EISRLSRGSFEGLESLVKLRLDGNALGALPDAVFAPLGNLLYLHLESNRIRFLGKNAFAQ 201
Query: 357 NYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVI-----LFILNETVFH 411
L L LS N L Q S+R T +I L L +F
Sbjct: 202 ---LGKLRFLNLSANEL--------QPSLRHAATFAPLRSLSSLILSANNLQHLGPRIFQ 250
Query: 412 ENYTYPDLEELRLSGNPL-HVLPTGNLLPPQLSRLRSLDLSRCKIDYLPPNVFNNTRNIT 470
P L L L GN L H+ P L LR L L ++ LP + ++
Sbjct: 251 H---LPRLGLLSLRGNQLTHLAPEAFW---GLEALRELRLEGNRLSQLPTALLEPLHSLE 304
Query: 471 SLNLANNNLSMTSELSFQFLDVLLELESLDLSNNNLTHISPTVLRHNRAITSIKLVGNPW 530
+L+L+ N LS +F L L E L L NN L+ +S + + A+ + L GN W
Sbjct: 305 ALDLSGNELSALHPATFGHLGRLRE---LSLRNNALSALSGDIFAASPALYRLDLDGNGW 361
Query: 531 KCDCNIADMWEW 542
CDC + + W
Sbjct: 362 TCDCRLRGLKRW 373
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 98/233 (42%), Gaps = 29/233 (12%)
Query: 34 GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYL 93
G R L LY +S+++ F L +L KL L GN L + VF PL +L YL
Sbjct: 125 GTLAPLRKLRILYANGNEISRLSRGSFEGLESLVKLRLDGNALGALPDAVFAPLGNLLYL 184
Query: 94 MLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTL--------------------- 132
L + ++ +AF L L+ L LS N+L+ +
Sbjct: 185 HLESNRIRFLGKNAFAQLGKLRFLNLSANELQPSLRHAATFAPLRSLSSLILSANNLQHL 244
Query: 133 ---VLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVH 189
+ +L +L L LR + +++L F LR L L N L L T L + L
Sbjct: 245 GPRIFQHLPRLGLLSLRGNQLTHLAPEAFWGLEALRELRLEGNRLSQL--PTALLEPLHS 302
Query: 190 LDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSA--ADLSVALKPLTKL 240
L++LDLS L L F + +LR L L N LSA D+ A L +L
Sbjct: 303 LEALDLSGNELSA-LHPATFGHLGRLRELSLRNNALSALSGDIFAASPALYRL 354
>sp|Q9Z2H4|LGR4_RAT Leucine-rich repeat-containing G-protein coupled receptor 4
OS=Rattus norvegicus GN=Lgr4 PE=2 SV=1
Length = 951
Score = 84.3 bits (207), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 102/351 (29%), Positives = 162/351 (46%), Gaps = 34/351 (9%)
Query: 18 GLITINLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPL 76
L ++ L+AN I V E +F L +L++ + +L+++ + +NL TL L L+ N +
Sbjct: 130 ALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSLTEVPVRPLSNLPTLQALTLALNNI 189
Query: 77 RIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGN 136
I F L+SL L L+ + +S FD L++L+TL+L+ N L ++ +
Sbjct: 190 SSIPDFAFTNLSSLVVLHLHNNKIKSLSQHCFDGLDNLETLDLNYNYLD---EFPQAIKA 246
Query: 137 LGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAEN-----------ELIDLDVATTLGQ 185
L L L + IS +PD F N LR ++L +N L DL G
Sbjct: 247 LPSLKELGFHSNSISVIPDGAFGGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHCLVIRGA 306
Query: 186 NL----------VHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALK 235
+L VHL+SL L+ + + +D N LRTL LS N + DL +
Sbjct: 307 SLVQWFPNLTGTVHLESLTLTGTKISS-IPDDLCQNQKMLRTLDLSYNNIR--DLP-SFN 362
Query: 236 PLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGY 295
L +SL+ +S + NTF T L+ LD+S N + + + + L ++ +LD+ +
Sbjct: 363 GCRALEEISLQRNQISLIKENTFQGLTSLRILDLSRNLIREIHSGAFAKLGTITNLDVSF 422
Query: 296 SNLQRISRSTFLKMTSLKTLILSGN-KL-ETLESGLFQNLTHLSVLELNNC 344
+ L + L L L GN KL + L + F NL LSV C
Sbjct: 423 NELTSFPTE---GLNGLNQLKLVGNFKLKDALAARDFANLRSLSVPYAYQC 470
Score = 80.1 bits (196), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 108/405 (26%), Positives = 167/405 (41%), Gaps = 60/405 (14%)
Query: 142 TLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLK 201
LD+ + I+ LP++ F + +L L LA N+L +L+H
Sbjct: 61 ALDISMNNITQLPEDAFKSFPFLEELQLAGNDL-----------SLIH------------ 97
Query: 202 GPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRF 261
A +L+ L L N L S A+ L+ L L L ++ +P ++F
Sbjct: 98 ----PKALSGLKELKVLTLQNNQLRTVP-SEAIHGLSALQSLRLDANHITSVPEDSFEGL 152
Query: 262 TCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNK 321
L+ L + N L + LS L +L+ L + +N+ I F ++SL L L NK
Sbjct: 153 VQLRHLWLDDNSLTEVPVRPLSNLPTLQALTLALNNISSIPDFAFTNLSSLVVLHLHNNK 212
Query: 322 LETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTK 381
+++L F L +L L+LN L + + P L+EL N + V+PD
Sbjct: 213 IKSLSQHCFDGLDNLETLDLNYNYLDEFPQAI----KALPSLKELGFHSNSISVIPDGAF 268
Query: 382 QYS--MRTI-----PTQIWKNFDF-----LVILFILNETVFHENYTYPD------LEELR 423
+ +RTI P N F L L I ++ +P+ LE L
Sbjct: 269 GGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHCLVIRGASLVQ---WFPNLTGTVHLESLT 325
Query: 424 LSGNPLHVLPTGNLLPPQLSRLRSLDLSRCKIDYLPPNVFNNTRNITSLNLANNNLSMTS 483
L+G + +P L LR+LDLS I LP FN R + ++L N +S+
Sbjct: 326 LTGTKISSIPDD--LCQNQKMLRTLDLSYNNIRDLPS--FNGCRALEEISLQRNQISLIK 381
Query: 484 ELSFQFLDVLLELESLDLSNNNLTHISPTVLRHNRAITSIKLVGN 528
E +FQ L L LDLS N + I IT++ + N
Sbjct: 382 ENTFQGLT---SLRILDLSRNLIREIHSGAFAKLGTITNLDVSFN 423
Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 111/420 (26%), Positives = 174/420 (41%), Gaps = 59/420 (14%)
Query: 67 NKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKS 126
LD+S N + + F LE L L +L+ I P A L LK L L N+L++
Sbjct: 60 QALDISMNNITQLPEDAFKSFPFLEELQLAGNDLSLIHPKALSGLKELKVLTLQNNQLRT 119
Query: 127 HIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQN 186
+ + L L +L L + I+++P++ F LR+L L +N L ++ V
Sbjct: 120 VP--SEAIHGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSLTEVPVR------ 171
Query: 187 LVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLR 246
PLS N L+ L L+ N +S+ A L+ L L L
Sbjct: 172 ----------------PLS-----NLPTLQALTLALNNISSIP-DFAFTNLSSLVVLHLH 209
Query: 247 NCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTF 306
N + L + F L+ LD+++N L D F + L SL+ L +++ I F
Sbjct: 210 NNKIKSLSQHCFDGLDNLETLDLNYNYL-DEFPQAIKALPSLKELGFHSNSISVIPDGAF 268
Query: 307 LKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTR----LNETVFHENYTYPD 362
L+T+ L N L + + F NL+ L L + L + L TV
Sbjct: 269 GGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHCLVIRGASLVQWFPNLTGTV--------H 320
Query: 363 LEELRLSGNPLHVLPD--STKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTYPDLE 420
LE L L+G + +PD Q +RT+ + N I + F+ LE
Sbjct: 321 LESLTLTGTKISSIPDDLCQNQKMLRTLDLS-YNN--------IRDLPSFNGCRA---LE 368
Query: 421 ELRLSGNPLHVLPTGNLLPPQLSRLRSLDLSRCKIDYLPPNVFNNTRNITSLNLANNNLS 480
E+ L N + ++ L+ LR LDLSR I + F IT+L+++ N L+
Sbjct: 369 EISLQRNQISLIKENTF--QGLTSLRILDLSRNLIREIHSGAFAKLGTITNLDVSFNELT 426
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 99/384 (25%), Positives = 157/384 (40%), Gaps = 88/384 (22%)
Query: 60 FTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLEL 119
F + L +L L+GN L +I P L L+ L L L + A L+ L++L L
Sbjct: 77 FKSFPFLEELQLAGNDLSLIHPKALSGLKELKVLTLQNNQLRTVPSEAIHGLSALQSLRL 136
Query: 120 SQNKLKS-------------HI---DWTLV------LGNLGKLDTLDLRQSGISNLPDNV 157
N + S H+ D +L L NL L L L + IS++PD
Sbjct: 137 DANHITSVPEDSFEGLVQLRHLWLDDNSLTEVPVRPLSNLPTLQALTLALNNISSIPDFA 196
Query: 158 FANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLK---------------- 201
F N + L L+L N++ L G L +L++LDL+ +L
Sbjct: 197 FTNLSSLVVLHLHNNKIKSLSQHCFDG--LDNLETLDLNYNYLDEFPQAIKALPSLKELG 254
Query: 202 ------GPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGL----- 250
+ + AF LRT++L NPLS S A L+ LH L +R L
Sbjct: 255 FHSNSISVIPDGAFGGNPLLRTIHLYDNPLSFVGNS-AFHNLSDLHCLVIRGASLVQWFP 313
Query: 251 ------------------SRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLD 292
S +P + L+ LD+S+N + D + + +LE +
Sbjct: 314 NLTGTVHLESLTLTGTKISSIPDDLCQNQKMLRTLDLSYNNIRDLPS--FNGCRALEEIS 371
Query: 293 MGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNET 352
+ + + I +TF +TSL+ L LS N + + SG F L ++ L+++
Sbjct: 372 LQRNQISLIKENTFQGLTSLRILDLSRNLIREIHSGAFAKLGTITNLDVS---------- 421
Query: 353 VFHENYTYP-----DLEELRLSGN 371
F+E ++P L +L+L GN
Sbjct: 422 -FNELTSFPTEGLNGLNQLKLVGN 444
Score = 35.4 bits (80), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 49/105 (46%), Gaps = 10/105 (9%)
Query: 425 SGNPLHVLPTGNLLPPQLSRL-RSLDLSRCKIDYLPPNVFNNTRNITSLNLANNNLSMTS 483
SG L +P G LS ++LD+S I LP + F + + L LA N+LS+
Sbjct: 44 SGKGLTAVPEG------LSAFTQALDISMNNITQLPEDAFKSFPFLEELQLAGNDLSLIH 97
Query: 484 ELSFQFLDVLLELESLDLSNNNLTHISPTVLRHNRAITSIKLVGN 528
+ L L EL+ L L NN L + + A+ S++L N
Sbjct: 98 P---KALSGLKELKVLTLQNNQLRTVPSEAIHGLSALQSLRLDAN 139
>sp|G5EFX6|SLIT1_CAEEL Slit homolog 1 protein OS=Caenorhabditis elegans GN=slt-1 PE=3 SV=1
Length = 1410
Score = 84.3 bits (207), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 142/581 (24%), Positives = 236/581 (40%), Gaps = 78/581 (13%)
Query: 17 PGLITINLNANPIQPVEG-AFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNP 75
P I L N I + +F ++L L + + +++I P+ F L L+ L L GN
Sbjct: 287 PSTTEIRLEQNQISSIPSHSFKNLKNLTRLDLSKNIITEIQPKAFLGLHNLHTLVLYGNN 346
Query: 76 LR------------------------IIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNL 111
+ I G FD + L L L ++ IS F NL
Sbjct: 347 ITDLKSDTFEGLGSLQLLLLNANQLTCIRRGTFDHVPKLSMLSLYDNDIKSISEVTFQNL 406
Query: 112 NHLKTLELSQNKL--KSHIDWTLVLGNLGKLDTLD--------LRQSGISNLPDNVFANN 161
L TL L++N L ++ W + ++T LR+ + LP N F
Sbjct: 407 TSLSTLHLAKNPLICDCNLQWLAQINLQKNIETSGARCEQPKRLRKKKFATLPPNKFKCK 466
Query: 162 TWLRNLNL-AENELIDLDVATTLGQNLVHLDSLDLSNCHLKG----PLSEDAFVNATKLR 216
+++ A++ ID T +D C+ +G P S F AT+L
Sbjct: 467 GSESFVSMYADSCFIDSICPTQCDCYGTTVD------CNKRGLNTIPTSIPRF--ATQL- 517
Query: 217 TLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLID 276
LSGN +S DL+ + L L L L N ++ + +F + + L+EL ++ N L
Sbjct: 518 --LLSGNNISTVDLNSNIHVLENLEVLDLSNNHITFINDKSFEKLSKLRELRLNDNKLHH 575
Query: 277 AFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHL 336
+ +L +LE LD+ +N+Q S F K T ++ + + GN L L
Sbjct: 576 FSSMVLDEQSNLEILDLSGNNIQCFSSIFFNKATRIREIKVIGNDL----------LCDC 625
Query: 337 SVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNP-----LHVLPDSTKQYSMRTIPTQ 391
+L L ++ L H + P ++ + S N P+ T P +
Sbjct: 626 RILPL----MSWLRSNSSH-SIDIPPCQQFQYSDNESDKQRCAAFPEETCSDDSNLCPPK 680
Query: 392 IWKNFDFLVILFILNETVFHENYTYPDLEELRLSGNPLHVLPTGNLLPPQLSRLRSLDLS 451
D +V N T F + D EL L N ++ +P +L +L L LDLS
Sbjct: 681 C-SCLDRVVRCSNKNLTSFPSRIPF-DTTELYLDANYINEIPAHDL--NRLYSLTKLDLS 736
Query: 452 RCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSFQFLDVLLELESLDLSNNNLTHISP 511
++ L N F+N +++L ++ N L L+F L+ L L L N+++ +
Sbjct: 737 HNRLISLENNTFSNLTRLSTLIISYNKLRCLQPLAFNGLNA---LRILSLHGNDISFLPQ 793
Query: 512 TVLRHNRAITSIKLVGNPWKCDCNIADMWEWATREKGDIGV 552
+ + +IT I + N CDCN+A +W + + G+
Sbjct: 794 SAFSNLTSITHIAVGSNSLYCDCNMAWFSKWIKSKFIEAGI 834
Score = 62.8 bits (151), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 141/608 (23%), Positives = 229/608 (37%), Gaps = 135/608 (22%)
Query: 57 PQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKT 116
PQ N T +LDL N + I P F L +L+ L L + I +F +L L+
Sbjct: 39 PQNIPNDTI--RLDLQDNEITKIGPNDFSSLMNLKALQLMDNQIVTIHNQSFSSLVFLQK 96
Query: 117 LELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENEL-- 174
L LS+N+++ H+ + NL KL LDL ++ I+ + D +L LNL +N +
Sbjct: 97 LRLSRNRIR-HLPDNVFQNNL-KLTHLDLSENDITVVSDAQLQGPEFLEVLNLDKNHIFC 154
Query: 175 ---------IDLDVATTLGQNLVHLD--------SLDLSN------CHLK-------GPL 204
+ L+V T G L + LDL N C L+
Sbjct: 155 LENNVISSWVSLEVLTLNGNRLTTFEEPSNARFRQLDLFNNPWNCDCRLRWMRKWLEKAE 214
Query: 205 SEDAFVNATKL------------RTLYLSGN-----PLSAADLSVALKPLTKLHR-LSLR 246
++ V AT L + + SGN + + P T + R
Sbjct: 215 GQNKTVCATPLNLQGSSIEILQDKFMTCSGNRKRRYKKTCETAEICPLPCTCTGTTVDCR 274
Query: 247 NCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTF 306
+ GL+ +P N T E+ + N + + L++L LD+ + + I F
Sbjct: 275 DSGLTYVPTNLPPSTT---EIRLEQNQISSIPSHSFKNLKNLTRLDLSKNIITEIQPKAF 331
Query: 307 LKMTSLKTLILSGNKLETLES------------------------GLFQNLTHLSVLELN 342
L + +L TL+L GN + L+S G F ++ LS+L L
Sbjct: 332 LGLHNLHTLVLYGNNITDLKSDTFEGLGSLQLLLLNANQLTCIRRGTFDHVPKLSMLSLY 391
Query: 343 NCGLTRLNETVFHENYTYPDLEELRLSGNPLHV------------------------LPD 378
+ + ++E F +N T L L L+ NPL P
Sbjct: 392 DNDIKSISEVTF-QNLT--SLSTLHLAKNPLICDCNLQWLAQINLQKNIETSGARCEQPK 448
Query: 379 STKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTYPDLEELRLSGNPLHVLPTG-NL 437
++ T+P +K + + ++ F ++ + G + G N
Sbjct: 449 RLRKKKFATLPPNKFKCKGSESFVSMYADSCFIDSICPTQCD---CYGTTVDCNKRGLNT 505
Query: 438 LPPQLSRLRS-LDLSRCKIDYLPPNV-FNNTRNITSLNLANNNLSMTSELSFQFLDVLLE 495
+P + R + L LS I + N + N+ L+L+NN+++ ++ SF+ L L E
Sbjct: 506 IPTSIPRFATQLLLSGNNISTVDLNSNIHVLENLEVLDLSNNHITFINDKSFEKLSKLRE 565
Query: 496 ---------------------LESLDLSNNNLTHISPTVLRHNRAITSIKLVGNPWKCDC 534
LE LDLS NN+ S I IK++GN CDC
Sbjct: 566 LRLNDNKLHHFSSMVLDEQSNLEILDLSGNNIQCFSSIFFNKATRIREIKVIGNDLLCDC 625
Query: 535 NIADMWEW 542
I + W
Sbjct: 626 RILPLMSW 633
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 59/125 (47%), Gaps = 24/125 (19%)
Query: 445 LRSLDLSRCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSFQ---FLDVL-------- 493
L+ L LSR +I +LP NVF N +T L+L+ N++++ S+ Q FL+VL
Sbjct: 94 LQKLRLSRNRIRHLPDNVFQNNLKLTHLDLSENDITVVSDAQLQGPEFLEVLNLDKNHIF 153
Query: 494 ----------LELESLDLSNNNLTHISPTVLRHNRAITSIKLVGNPWKCDCNIADMWEWA 543
+ LE L L+ N LT N + L NPW CDC + M +W
Sbjct: 154 CLENNVISSWVSLEVLTLNGNRLTTFEEP---SNARFRQLDLFNNPWNCDCRLRWMRKWL 210
Query: 544 TREKG 548
+ +G
Sbjct: 211 EKAEG 215
>sp|A2ARI4|LGR4_MOUSE Leucine-rich repeat-containing G-protein coupled receptor 4 OS=Mus
musculus GN=Lgr4 PE=2 SV=1
Length = 951
Score = 83.6 bits (205), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 111/402 (27%), Positives = 164/402 (40%), Gaps = 54/402 (13%)
Query: 142 TLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLK 201
LD+ + I+ LP++ F N +L L LA N DLS H K
Sbjct: 61 ALDISMNNITQLPEDAFKNFPFLEELQLAGN---------------------DLSFIHPK 99
Query: 202 GPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRF 261
A +L+ L L N L S A++ L+ L L L ++ +P ++F
Sbjct: 100 ------ALSGLKELKVLTLQNNQLKTVP-SEAIRGLSALQSLRLDANHITSVPEDSFEGL 152
Query: 262 TCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNK 321
L+ L + N L + LS L +L+ L + +N+ I F ++SL L L NK
Sbjct: 153 VQLRHLWLDDNILTEVPVRPLSNLPTLQALTLALNNISSIPDFAFTNLSSLVVLHLHNNK 212
Query: 322 LETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTK 381
+++L F L +L L+LN L + + P L+EL N + V+PD
Sbjct: 213 IKSLSQHCFDGLDNLETLDLNYNNLDEFPQAI----KALPSLKELGFHSNSISVIPDGAF 268
Query: 382 QYS--MRTI-----PTQIWKNFDF--------LVILFILNETVFHENYTYPDLEELRLSG 426
+ +RTI P N F LVI F LE L L+G
Sbjct: 269 AGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHSLVIRGASLVQWFPNLAGTVHLESLTLTG 328
Query: 427 NPLHVLPTGNLLPPQLSRLRSLDLSRCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELS 486
+ +P + L LR+LDLS I LP FN R + ++L N +S+ E +
Sbjct: 329 TKISSIP--DDLCQNQKMLRTLDLSYNDIRDLPS--FNGCRALEEISLQRNQISLIKETT 384
Query: 487 FQFLDVLLELESLDLSNNNLTHISPTVLRHNRAITSIKLVGN 528
FQ L L LDLS N + I IT++ + N
Sbjct: 385 FQGLT---SLRILDLSRNLIREIHSGAFAKLGTITNLDVSFN 423
Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 98/349 (28%), Positives = 159/349 (45%), Gaps = 30/349 (8%)
Query: 18 GLITINLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPL 76
L ++ L+AN I V E +F L +L++ + L+++ + +NL TL L L+ N +
Sbjct: 130 ALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNILTEVPVRPLSNLPTLQALTLALNNI 189
Query: 77 RIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGN 136
I F L+SL L L+ + +S FD L++L+TL+L+ N L ++ +
Sbjct: 190 SSIPDFAFTNLSSLVVLHLHNNKIKSLSQHCFDGLDNLETLDLNYNNLD---EFPQAIKA 246
Query: 137 LGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAEN-----------ELIDLDVATTLGQ 185
L L L + IS +PD FA N LR ++L +N L DL G
Sbjct: 247 LPSLKELGFHSNSISVIPDGAFAGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHSLVIRGA 306
Query: 186 NL----------VHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALK 235
+L VHL+SL L+ + + +D N LRTL LS N + DL +
Sbjct: 307 SLVQWFPNLAGTVHLESLTLTGTKISS-IPDDLCQNQKMLRTLDLSYNDIR--DLP-SFN 362
Query: 236 PLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGY 295
L +SL+ +S + TF T L+ LD+S N + + + + L ++ +LD+ +
Sbjct: 363 GCRALEEISLQRNQISLIKETTFQGLTSLRILDLSRNLIREIHSGAFAKLGTITNLDVSF 422
Query: 296 SNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNC 344
+ L + LK L+ + + L + F NL LSV C
Sbjct: 423 NELTSFPTEGLNGLNQLK-LVGNFQLKDALAARDFANLRSLSVPYAYQC 470
Score = 69.3 bits (168), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 109/422 (25%), Positives = 173/422 (40%), Gaps = 63/422 (14%)
Query: 67 NKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKS 126
LD+S N + + F LE L L +L++I P A L LK L L N+LK+
Sbjct: 60 QALDISMNNITQLPEDAFKNFPFLEELQLAGNDLSFIHPKALSGLKELKVLTLQNNQLKT 119
Query: 127 HIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQN 186
+ + G L L +L L + I+++P++ F LR+L L +N L ++ V
Sbjct: 120 -VPSEAIRG-LSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNILTEVPVR------ 171
Query: 187 LVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLR 246
PLS N L+ L L+ N +S+ A L+ L L L
Sbjct: 172 ----------------PLS-----NLPTLQALTLALNNISSIP-DFAFTNLSSLVVLHLH 209
Query: 247 NCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTF 306
N + L + F L+ LD+++N L D F + L SL+ L +++ I F
Sbjct: 210 NNKIKSLSQHCFDGLDNLETLDLNYNNL-DEFPQAIKALPSLKELGFHSNSISVIPDGAF 268
Query: 307 LKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEEL 366
L+T+ L N L + + F NL+ L L + L + F LE L
Sbjct: 269 AGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHSLVIRGASLVQW----FPNLAGTVHLESL 324
Query: 367 RLSGNPLHVLPD--STKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTYPD------ 418
L+G + +PD Q +RT+ + +++ P
Sbjct: 325 TLTGTKISSIPDDLCQNQKMLRTL------------------DLSYNDIRDLPSFNGCRA 366
Query: 419 LEELRLSGNPLHVLPTGNLLPPQLSRLRSLDLSRCKIDYLPPNVFNNTRNITSLNLANNN 478
LEE+ L N + ++ L+ LR LDLSR I + F IT+L+++ N
Sbjct: 367 LEEISLQRNQISLIKETTF--QGLTSLRILDLSRNLIREIHSGAFAKLGTITNLDVSFNE 424
Query: 479 LS 480
L+
Sbjct: 425 LT 426
Score = 67.4 bits (163), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 99/385 (25%), Positives = 154/385 (40%), Gaps = 90/385 (23%)
Query: 60 FTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLEL 119
F N L +L L+GN L I P L L+ L L L + A L+ L++L L
Sbjct: 77 FKNFPFLEELQLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAIRGLSALQSLRL 136
Query: 120 SQNKLKS-------------HIDW----------TLVLGNLGKLDTLDLRQSGISNLPDN 156
N + S H+ W L NL L L L + IS++PD
Sbjct: 137 DANHITSVPEDSFEGLVQLRHL-WLDDNILTEVPVRPLSNLPTLQALTLALNNISSIPDF 195
Query: 157 VFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLK--------------- 201
F N + L L+L N++ L G L +L++LDL+ +L
Sbjct: 196 AFTNLSSLVVLHLHNNKIKSLSQHCFDG--LDNLETLDLNYNNLDEFPQAIKALPSLKEL 253
Query: 202 -------GPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGL---- 250
+ + AF LRT++L NPLS S A L+ LH L +R L
Sbjct: 254 GFHSNSISVIPDGAFAGNPLLRTIHLYDNPLSFVGNS-AFHNLSDLHSLVIRGASLVQWF 312
Query: 251 -------------------SRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHL 291
S +P + L+ LD+S+N + D + + +LE +
Sbjct: 313 PNLAGTVHLESLTLTGTKISSIPDDLCQNQKMLRTLDLSYNDIRDLPS--FNGCRALEEI 370
Query: 292 DMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNE 351
+ + + I +TF +TSL+ L LS N + + SG F L ++ L+++
Sbjct: 371 SLQRNQISLIKETTFQGLTSLRILDLSRNLIREIHSGAFAKLGTITNLDVS--------- 421
Query: 352 TVFHENYTYP-----DLEELRLSGN 371
F+E ++P L +L+L GN
Sbjct: 422 --FNELTSFPTEGLNGLNQLKLVGN 444
Score = 39.3 bits (90), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 49/105 (46%), Gaps = 10/105 (9%)
Query: 425 SGNPLHVLPTGNLLPPQLSRL-RSLDLSRCKIDYLPPNVFNNTRNITSLNLANNNLSMTS 483
SG L +P G LS ++LD+S I LP + F N + L LA N+LS
Sbjct: 44 SGKGLTAVPEG------LSAFTQALDISMNNITQLPEDAFKNFPFLEELQLAGNDLSFIH 97
Query: 484 ELSFQFLDVLLELESLDLSNNNLTHISPTVLRHNRAITSIKLVGN 528
+ L L EL+ L L NN L + +R A+ S++L N
Sbjct: 98 P---KALSGLKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDAN 139
>sp|Q9BXB1|LGR4_HUMAN Leucine-rich repeat-containing G-protein coupled receptor 4 OS=Homo
sapiens GN=LGR4 PE=2 SV=2
Length = 951
Score = 83.6 bits (205), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 110/406 (27%), Positives = 168/406 (41%), Gaps = 66/406 (16%)
Query: 141 DTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHL 200
LD+ + I+ LP++ F N +L L LA N DLS H
Sbjct: 60 QALDISMNNITQLPEDAFKNFPFLEELQLAGN---------------------DLSFIHP 98
Query: 201 KGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHR 260
K A +L+ L L N L S A++ L+ L L L ++ +P ++F
Sbjct: 99 K------ALSGLKELKVLTLQNNQLKTVP-SEAIRGLSALQSLRLDANHITSVPEDSFEG 151
Query: 261 FTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGN 320
L+ L + N L + LS L +L+ L + + + I F ++SL L L N
Sbjct: 152 LVQLRHLWLDDNSLTEVPVHPLSNLPTLQALTLALNKISSIPDFAFTNLSSLVVLHLHNN 211
Query: 321 KLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDST 380
K+ +L F L +L L+LN L + + P L+EL N + V+PD
Sbjct: 212 KIRSLSQHCFDGLDNLETLDLNYNNLGEFPQAI----KALPSLKELGFHSNSISVIPDGA 267
Query: 381 KQYS--MRTI-----PTQIWKNFDF-----LVILFILNETVFHENYTYPD------LEEL 422
+ +RTI P N F L L I ++ + +P+ LE L
Sbjct: 268 FDGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHSLVIRGASMVQQ---FPNLTGTVHLESL 324
Query: 423 RLSGNPLHVLPTGNLLPPQLSRLRSLDLSRCKIDYLPPNVFNNTRNITSLNLANNNLSMT 482
L+G + +P N L + LR+LDLS I LP FN + ++L N +
Sbjct: 325 TLTGTKISSIP--NNLCQEQKMLRTLDLSYNNIRDLPS--FNGCHALEEISLQRNQIYQI 380
Query: 483 SELSFQFLDVLLELESLDLSNNNLTHISPTVLRHNRAITSIKLVGN 528
E +FQ L+ L LDLS N + I H+RA ++ + N
Sbjct: 381 KEGTFQ---GLISLRILDLSRNLIHEI------HSRAFATLGPITN 417
Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 157/360 (43%), Gaps = 51/360 (14%)
Query: 18 GLITINLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPL 76
L ++ L+AN I V E +F L +L++ + +L+++ +NL TL L L+ N +
Sbjct: 130 ALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSLTEVPVHPLSNLPTLQALTLALNKI 189
Query: 77 RIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGN 136
I F L+SL L L+ + +S FD L++L+TL+L+ N L ++ +
Sbjct: 190 SSIPDFAFTNLSSLVVLHLHNNKIRSLSQHCFDGLDNLETLDLNYNNLG---EFPQAIKA 246
Query: 137 LGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLS 196
L L L + IS +PD F N LR ++L +N L
Sbjct: 247 LPSLKELGFHSNSISVIPDGAFDGNPLLRTIHLYDNPL---------------------- 284
Query: 197 NCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPAN 256
+ AF N + L +L + G S L L L+L +S +P N
Sbjct: 285 -----SFVGNSAFHNLSDLHSLVIRGA--SMVQQFPNLTGTVHLESLTLTGTKISSIPNN 337
Query: 257 TFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLI 316
L+ LD+S+N + D + + +LE + + + + +I TF + SL+ L
Sbjct: 338 LCQEQKMLRTLDLSYNNIRDLPS--FNGCHALEEISLQRNQIYQIKEGTFQGLISLRILD 395
Query: 317 LSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYP-----DLEELRLSGN 371
LS N + + S F L ++ L+++ F+E ++P L +L+L GN
Sbjct: 396 LSRNLIHEIHSRAFATLGPITNLDVS-----------FNELTSFPTEGLNGLNQLKLVGN 444
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 111/420 (26%), Positives = 178/420 (42%), Gaps = 59/420 (14%)
Query: 67 NKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKS 126
LD+S N + + F LE L L +L++I P A L LK L L N+LK+
Sbjct: 60 QALDISMNNITQLPEDAFKNFPFLEELQLAGNDLSFIHPKALSGLKELKVLTLQNNQLKT 119
Query: 127 HIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQN 186
+ + G L L +L L + I+++P++ F LR+L L +N L ++ V
Sbjct: 120 -VPSEAIRG-LSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSLTEVPVH------ 171
Query: 187 LVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLR 246
PLS N L+ L L+ N +S+ A L+ L L L
Sbjct: 172 ----------------PLS-----NLPTLQALTLALNKISSIP-DFAFTNLSSLVVLHLH 209
Query: 247 NCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTF 306
N + L + F L+ LD+++N L + F + L SL+ L +++ I F
Sbjct: 210 NNKIRSLSQHCFDGLDNLETLDLNYNNLGE-FPQAIKALPSLKELGFHSNSISVIPDGAF 268
Query: 307 LKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTR----LNETVFHENYTYPD 362
L+T+ L N L + + F NL+ L L + + + L TV
Sbjct: 269 DGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHSLVIRGASMVQQFPNLTGTV--------H 320
Query: 363 LEELRLSGNPLHVLPD--STKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTYPDLE 420
LE L L+G + +P+ +Q +RT+ + N I + F+ + LE
Sbjct: 321 LESLTLTGTKISSIPNNLCQEQKMLRTLDLS-YNN--------IRDLPSFNGCHA---LE 368
Query: 421 ELRLSGNPLHVLPTGNLLPPQLSRLRSLDLSRCKIDYLPPNVFNNTRNITSLNLANNNLS 480
E+ L N ++ + G L LR LDLSR I + F IT+L+++ N L+
Sbjct: 369 EISLQRNQIYQIKEGTF--QGLISLRILDLSRNLIHEIHSRAFATLGPITNLDVSFNELT 426
Score = 39.3 bits (90), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 49/105 (46%), Gaps = 10/105 (9%)
Query: 425 SGNPLHVLPTGNLLPPQLSRL-RSLDLSRCKIDYLPPNVFNNTRNITSLNLANNNLSMTS 483
SG L +P G LS ++LD+S I LP + F N + L LA N+LS
Sbjct: 44 SGKGLTAVPEG------LSAFTQALDISMNNITQLPEDAFKNFPFLEELQLAGNDLSFIH 97
Query: 484 ELSFQFLDVLLELESLDLSNNNLTHISPTVLRHNRAITSIKLVGN 528
+ L L EL+ L L NN L + +R A+ S++L N
Sbjct: 98 P---KALSGLKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDAN 139
>sp|Q80TR4|SLIT1_MOUSE Slit homolog 1 protein OS=Mus musculus GN=Slit1 PE=1 SV=2
Length = 1531
Score = 83.2 bits (204), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 143/611 (23%), Positives = 239/611 (39%), Gaps = 86/611 (14%)
Query: 19 LITINLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLR 77
+ I L N I+ + GAF R L + + +++I P F L +LN L L GN +
Sbjct: 311 MTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKIT 370
Query: 78 IIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNL 137
+ GVF L +L+ L+LN + I P AF +L +L L L NK++S T +L
Sbjct: 371 DLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFT--SL 428
Query: 138 GKLDTLDLRQSGISNLPDNVFANNTWLRNL-----------------NLAENELIDLDVA 180
+ TL L Q+ P N WL + LA + +
Sbjct: 429 RAIQTLHLAQN-----PFICDCNLKWLADFLRTNPIETTGARCASPRRLANKRIGQIKSK 483
Query: 181 T----------TLGQNLVHLDSLDLSN------CHLKGPLSEDAFVNATKL--------R 216
G HL+S S+ C + + E + + +K+
Sbjct: 484 KFRCSAKEQYFIPGTEDYHLNSECTSDVACPHKCRCEASVVECSSLKLSKIPERIPQSTT 543
Query: 217 TLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLID 276
L L+ N +S + + K L+ L +++L N +S + TF + EL ++ N L
Sbjct: 544 ELRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGAASVSELHLTANQLES 603
Query: 277 AFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHL 336
+ + L+ L L + + + I +F + +++ L L N + T+ G F L L
Sbjct: 604 IRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDTLQAL 663
Query: 337 SVLEL------NNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPT 390
S L L NC L+ L + + ++GNP PD +Q ++ +
Sbjct: 664 STLNLLANPFNCNCHLSWLGDWLRKRKI---------VTGNPRCQNPDFLRQIPLQDVAF 714
Query: 391 QIWKNFDFLVILFILNETVFHENYTYPDLEELRLSGNPLHVLPTG--------------- 435
++ + + L + D +R S L LP G
Sbjct: 715 PDFRCEEGQEEVGCLPRPQCPQECACLDT-VVRCSNKHLQALPKGIPKNVTELYLDGNQF 773
Query: 436 NLLPPQLSRLRSL---DLSRCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSFQFLDV 492
L+P QLS + L DLS KI L + F N +T+L L+ N L L+FQ L
Sbjct: 774 TLVPGQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRS 833
Query: 493 LLELESLDLSNNNLTHISPTVLRHNRAITSIKLVGNPWKCDCNIADMWEWATREKGDIGV 552
L L N+++ + + +++ + + NP CDC + + W + G+
Sbjct: 834 LRLLSL---HGNDVSTLQEGIFADVTSLSHLAIGANPLYCDCRLRWLSSWVKTGYKEPGI 890
Query: 553 LVGSTTPTEIG 563
+ P G
Sbjct: 891 ARCAGPPEMEG 901
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 125/538 (23%), Positives = 212/538 (39%), Gaps = 58/538 (10%)
Query: 7 VYNDRRNLDNPGLITINLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTT 65
++D + L+ + LN N +Q + E F ++L L + E L + + F T
Sbjct: 104 AFDDMKELER-----LRLNRNQLQVLPELLFQNNQALSRLDLSENFLQAVPRKAFRGATD 158
Query: 66 LNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKL- 124
L L L N + IE G F L LE L LN N+T I S+F+++ L+T L N L
Sbjct: 159 LKNLQLDKNRISCIEEGAFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHLF 218
Query: 125 -KSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTL 183
H+ W + LRQ L + LR LN+AE + + +
Sbjct: 219 CDCHLAWL----------SQWLRQRPTIGLFTQC-SGPASLRGLNVAEVQKGEFSCSGQG 267
Query: 184 GQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRL 243
+L +C P R L+ P A+L + + RL
Sbjct: 268 EAAGAPACTLSSGSC----PAMCSCSSGIVDCRGKGLTAIP---ANLPETMTEI----RL 316
Query: 244 SLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISR 303
L G+ +P F + L+ +D+S+N + + L SL L + + + + R
Sbjct: 317 ELN--GIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPR 374
Query: 304 STFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDL 363
F + +L+ L+L+ NK+ + FQ+L +LS+L L + + L + F + +
Sbjct: 375 GVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTF---TSLRAI 431
Query: 364 EELRLSGNP------LHVLPDSTKQYSMRTIPTQIWK-----NFDFLVILFILNETVFHE 412
+ L L+ NP L L D + + T + N I E
Sbjct: 432 QTLHLAQNPFICDCNLKWLADFLRTNPIETTGARCASPRRLANKRIGQIKSKKFRCSAKE 491
Query: 413 NYTYPDLEELRLSGNPLHVLPTGNLLPPQLSRLRS--LDLSRCKIDYLPPNVFNNTRNIT 470
Y P E+ L+ T ++ P R + ++ S K+ +P + +T T
Sbjct: 492 QYFIPGTEDYHLNSE-----CTSDVACPHKCRCEASVVECSSLKLSKIPERIPQST---T 543
Query: 471 SLNLANNNLSMTSELSFQFLDVLLELESLDLSNNNLTHISPTVLRHNRAITSIKLVGN 528
L L NN +S+ L L+ ++LSNN ++ I +++ + L N
Sbjct: 544 ELRLNNNEISILEATG--LFKKLSHLKKINLSNNKVSEIEDGTFEGAASVSELHLTAN 599
Score = 62.8 bits (151), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 91/193 (47%), Gaps = 17/193 (8%)
Query: 390 TQIWKNFDFL------VILFILNETVFHENYTYPD---LEELRLSGNPLHVLPTGNLLPP 440
T+I KN DF V+ + N+ E + D LE LRL+ N L VLP LL
Sbjct: 74 TRIHKN-DFAGLKQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLQVLP--ELLFQ 130
Query: 441 QLSRLRSLDLSRCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSFQFLDVLLELESLD 500
L LDLS + +P F ++ +L L N +S E +F+ L LE L
Sbjct: 131 NNQALSRLDLSENFLQAVPRKAFRGATDLKNLQLDKNRISCIEEGAFR---ALRGLEVLT 187
Query: 501 LSNNNLTHISPTVLRHNRAITSIKLVGNPWKCDCNIADMWEWATREKGDIGVLVGSTTPT 560
L+NNN+T I + H + + +L N CDC++A + +W R++ IG+ + P
Sbjct: 188 LNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQW-LRQRPTIGLFTQCSGPA 246
Query: 561 EI-GFGASRKKKG 572
+ G + +KG
Sbjct: 247 SLRGLNVAEVQKG 259
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 126/329 (38%), Gaps = 41/329 (12%)
Query: 204 LSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTC 263
+ ++ F +LR L L N + A + A + +L RL L L LP F
Sbjct: 76 IHKNDFAGLKQLRVLQLMENQIGAVERG-AFDDMKELERLRLNRNQLQVLPELLFQNNQA 134
Query: 264 LQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLE 323
L LD+S N LQ + R F T LK L L N++
Sbjct: 135 LSRLDLSEN------------------------FLQAVPRKAFRGATDLKNLQLDKNRIS 170
Query: 324 TLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQY 383
+E G F+ L L VL LNN +T + + F+ P L RL N H+ D +
Sbjct: 171 CIEEGAFRALRGLEVLTLNNNNITTIPVSSFNH---MPKLRTFRLHSN--HLFCDCHLAW 225
Query: 384 ---SMRTIPT-QIWKNFDFLVILFILNETVFHENYTYPDLEELRLSGNPLHVLPTGNLLP 439
+R PT ++ L LN + + + +G P L +G+
Sbjct: 226 LSQWLRQRPTIGLFTQCSGPASLRGLNVAEVQKG-EFSCSGQGEAAGAPACTLSSGSC-- 282
Query: 440 PQLSRLRSLDLSRCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSFQFLDVLLELESL 499
P + S + C+ L N +T + L N + +F +L +
Sbjct: 283 PAMCSCSS-GIVDCRGKGLTAIPANLPETMTEIRLELNGIKSIPPGAF---SPYRKLRRI 338
Query: 500 DLSNNNLTHISPTVLRHNRAITSIKLVGN 528
DLSNN + I+P + R++ S+ L GN
Sbjct: 339 DLSNNQIAEIAPDAFQGLRSLNSLVLYGN 367
>sp|O75473|LGR5_HUMAN Leucine-rich repeat-containing G-protein coupled receptor 5 OS=Homo
sapiens GN=LGR5 PE=2 SV=1
Length = 907
Score = 83.2 bits (204), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 116/427 (27%), Positives = 186/427 (43%), Gaps = 71/427 (16%)
Query: 69 LDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHI 128
LDLS N + + P L LE L L LTYI AF L LK L L N+L+ H+
Sbjct: 71 LDLSMNNISQLLPNPLPSLRFLEELRLAGNALTYIPKGAFTGLYSLKVLMLQNNQLR-HV 129
Query: 129 DWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLV 188
T L NL L +L L + IS +P + F+ LR+L L +N L ++ V + +
Sbjct: 130 P-TEALQNLRSLQSLRLDANHISYVPPSCFSGLHSLRHLWLDDNALTEIPVQAFRSLSAL 188
Query: 189 HLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNC 248
+L L+ H + + AF N + L L+L N ++H L + C
Sbjct: 189 QAMTLALNKIH---HIPDYAFGNLSSLVVLHLHNN---------------RIHSLG-KKC 229
Query: 249 GLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLK 308
F L+ LD+++N L D F + L +L+ L +N++ I F+
Sbjct: 230 ---------FDGLHSLETLDLNYNNL-DEFPTAIRTLSNLKELGFHSNNIRSIPEKAFVG 279
Query: 309 MTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRL 368
SL T+ N ++ + FQ+L L L LN G +++ E F + +LE L L
Sbjct: 280 NPSLITIHFYDNPIQFVGRSAFQHLPELRTLTLN--GASQITE--FPDLTGTANLESLTL 335
Query: 369 SGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTYPDLEELRLSGNP 428
+G + LP +T+ Q+ P+L+ L LS N
Sbjct: 336 TGAQISSLP--------QTVCNQL------------------------PNLQVLDLSYNL 363
Query: 429 LHVLPTGNLLPPQLSRLRSLDLSRCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSFQ 488
L LP+ ++ +L+ +DL +I + + F ++ SLNLA N +++ +F
Sbjct: 364 LEDLPSFSVC----QKLQKIDLRHNEIYEIKVDTFQQLLSLRSLNLAWNKIAIIHPNAFS 419
Query: 489 FLDVLLE 495
L L++
Sbjct: 420 TLPSLIK 426
Score = 73.2 bits (178), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 143/319 (44%), Gaps = 35/319 (10%)
Query: 19 LITINLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLR 77
L ++ L+AN I V F SL +L++ + L++I Q F +L+ L + L+ N +
Sbjct: 140 LQSLRLDANHISYVPPSCFSGLHSLRHLWLDDNALTEIPVQAFRSLSALQAMTLALNKIH 199
Query: 78 IIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNL 137
I F L+SL L L+ + + FD L+ L+TL+L+ N L ++ + L
Sbjct: 200 HIPDYAFGNLSSLVVLHLHNNRIHSLGKKCFDGLHSLETLDLNYNNLD---EFPTAIRTL 256
Query: 138 GKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSN 197
L L + I ++P+ F N L ++ +N + +G++
Sbjct: 257 SNLKELGFHSNNIRSIPEKAFVGNPSLITIHFYDNPI------QFVGRS----------- 299
Query: 198 CHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANT 257
AF + +LRTL L+G S L L L+L +S LP
Sbjct: 300 ----------AFQHLPELRTLTLNGA--SQITEFPDLTGTANLESLTLTGAQISSLPQTV 347
Query: 258 FHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLIL 317
++ LQ LD+S+N L D + S + L+ +D+ ++ + I TF ++ SL++L L
Sbjct: 348 CNQLPNLQVLDLSYNLLEDLPS--FSVCQKLQKIDLRHNEIYEIKVDTFQQLLSLRSLNL 405
Query: 318 SGNKLETLESGLFQNLTHL 336
+ NK+ + F L L
Sbjct: 406 AWNKIAIIHPNAFSTLPSL 424
Score = 63.9 bits (154), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 137/332 (41%), Gaps = 33/332 (9%)
Query: 215 LRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPL 274
L L L+GN L+ A L L L L+N L +P LQ L + N +
Sbjct: 92 LEELRLAGNALTYIPKG-AFTGLYSLKVLMLQNNQLRHVPTEALQNLRSLQSLRLDANHI 150
Query: 275 IDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLT 334
+ S L SL HL + + L I F +++L+ + L+ NK+ + F NL+
Sbjct: 151 SYVPPSCFSGLHSLRHLWLDDNALTEIPVQAFRSLSALQAMTLALNKIHHIPDYAFGNLS 210
Query: 335 HLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQYS---------- 384
L VL L+N + L + F ++ LE L L+ N L P + + S
Sbjct: 211 SLVVLHLHNNRIHSLGKKCFDGLHS---LETLDLNYNNLDEFPTAIRTLSNLKELGFHSN 267
Query: 385 -MRTIPTQIW-KNFDFLVILFILNETVFHENYTYPDLEELRL----SGNPLHVLP--TGN 436
+R+IP + + N + I F N F + L ELR + + P TG
Sbjct: 268 NIRSIPEKAFVGNPSLITIHFYDNPIQFVGRSAFQHLPELRTLTLNGASQITEFPDLTGT 327
Query: 437 LLPPQLSRLRSLDLSRCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSFQFLDVLLEL 496
+ L SL L+ +I LP V N N+ L+L+ N L S V +L
Sbjct: 328 ------ANLESLTLTGAQISSLPQTVCNQLPNLQVLDLSYNLLEDLPSFS-----VCQKL 376
Query: 497 ESLDLSNNNLTHISPTVLRHNRAITSIKLVGN 528
+ +DL +N + I + ++ S+ L N
Sbjct: 377 QKIDLRHNEIYEIKVDTFQQLLSLRSLNLAWN 408
Score = 41.2 bits (95), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 28/165 (16%)
Query: 10 DRRNLDNPGLITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKL 69
++ + NP LITI+ NPIQ V RS F +L L L
Sbjct: 274 EKAFVGNPSLITIHFYDNPIQ------FVGRSA-----------------FQHLPELRTL 310
Query: 70 DLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHID 129
L+G +I E +LE L L ++ + + + L +L+ L+LS N L+
Sbjct: 311 TLNGAS-QITEFPDLTGTANLESLTLTGAQISSLPQTVCNQLPNLQVLDLSYNLLEDLPS 369
Query: 130 WTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENEL 174
+++ KL +DLR + I + + F LR+LNLA N++
Sbjct: 370 FSVC----QKLQKIDLRHNEIYEIKVDTFQQLLSLRSLNLAWNKI 410
>sp|Q50L44|LIGO1_CHICK Leucine-rich repeat and immunoglobulin-like domain-containing nogo
receptor-interacting protein 1 OS=Gallus gallus
GN=LINGO1 PE=2 SV=1
Length = 613
Score = 82.8 bits (203), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 138/303 (45%), Gaps = 28/303 (9%)
Query: 64 TTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNK 123
T +LDL N ++ + F LE L LN ++ I P AF+NL +L+TL L N+
Sbjct: 64 TETRQLDLGKNRIKTLNQDEFANYPHLEELELNENIISAIEPGAFNNLFNLRTLGLRSNR 123
Query: 124 LKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTL 183
LK + V L L LD+ ++ I L D +F + L++L + +N+L+ +
Sbjct: 124 LK--LIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFS 181
Query: 184 GQNLVHLDSLDLSNC-----------HLKG------------PLSEDAFVNATKLRTLYL 220
G N L+ L L C HL G + + +F +L+ L +
Sbjct: 182 GLN--SLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEI 239
Query: 221 SGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTA 280
S P S L L L LS+ +C L+ +P + L+ L++S+NP++ +
Sbjct: 240 SHWPYLDTMTSNCLYGL-NLTSLSITHCNLTSIPYVSVRHLVYLRFLNLSYNPIVTIEGS 298
Query: 281 LLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLE 340
+L L L+ + + L + F + L+ L +SGN L TLE F ++ +L L
Sbjct: 299 MLHDLLRLQEIQLVGGQLTTVEPFAFRGLNYLRILNVSGNLLTTLEESAFHSVGNLETLI 358
Query: 341 LNN 343
L+N
Sbjct: 359 LDN 361
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 93/308 (30%), Positives = 138/308 (44%), Gaps = 33/308 (10%)
Query: 17 PGLITINLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNP 75
P L + LN N I +E GAF +L L ++ L I FT L+ L KLD+S N
Sbjct: 88 PHLEELELNENIISAIEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENK 147
Query: 76 LRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLG 135
+ I+ +F L +L+ L + +L YIS AF LN L+ L L + L S T L
Sbjct: 148 IVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIP--TEALS 205
Query: 136 NLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTL-GQNLVHLDSLD 194
+L L L LR I+ + D F L+ L ++ +D + L G NL SL
Sbjct: 206 HLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTSNCLYGLNLT---SLS 262
Query: 195 LSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLP 254
+++C+L + + + LR L LS NP+ + S+ L L +L + L L+ +
Sbjct: 263 ITHCNLTS-IPYVSVRHLVYLRFLNLSYNPIVTIEGSM-LHDLLRLQEIQLVGGQLTTVE 320
Query: 255 ANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKT 314
F L+ L++S N LL+ LE S F + +L+T
Sbjct: 321 PFAFRGLNYLRILNVSGN--------LLTTLEE----------------SAFHSVGNLET 356
Query: 315 LILSGNKL 322
LIL N L
Sbjct: 357 LILDNNPL 364
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 90/423 (21%), Positives = 166/423 (39%), Gaps = 58/423 (13%)
Query: 238 TKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSN 297
T+ +L L + L + F + L+EL+++ N + + L +L L + +
Sbjct: 64 TETRQLDLGKNRIKTLNQDEFANYPHLEELELNENIISAIEPGAFNNLFNLRTLGLRSNR 123
Query: 298 LQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHEN 357
L+ I F +++L L +S NK+ L +FQ+L +L LE+ + L ++ F
Sbjct: 124 LKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFS-- 181
Query: 358 YTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFI--LNETVFHENYT 415
LE+L L ++ ++ +IPT+ + L++L + LN + Y+
Sbjct: 182 -GLNSLEQLTL------------EKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRD-YS 227
Query: 416 YPDLEELR---LSGNPLHVLPTGNLLPPQLSRLRSLDLSRCKIDYLPPNVFNNTRNITSL 472
+ L L+ +S P T N L L SL ++ C + +P + + R++ L
Sbjct: 228 FKRLYRLKVLEISHWPYLDTMTSNCL--YGLNLTSLSITHCNLTSIP---YVSVRHLVYL 282
Query: 473 NLANNNLSMTSELSFQFLDVLLELESLDLSNNNLTHISPTVLRHNRAITSIKLVG----- 527
N + + + L LL L+ + L LT + P R + + + G
Sbjct: 283 RFLNLSYNPIVTIEGSMLHDLLRLQEIQLVGGQLTTVEPFAFRGLNYLRILNVSGNLLTT 342
Query: 528 -------------------NPWKCDCNIADMWEWATREKGDIGVLVGSTTPTEIGFGASR 568
NP CDC + +W + R + + + + E G
Sbjct: 343 LEESAFHSVGNLETLILDNNPLACDCRL--LWVFRRRWRLNFNKQQPTCSTPEFVQGKEF 400
Query: 569 KKKGLVC---YFDIFTTPTRKRPGRELFASTNKTWARYVKEADC--PSSKLFRPPRTNSR 623
K V YF R R +++F T +V AD P + ++ PR +
Sbjct: 401 KDFPDVLLPNYFTCRRARIRDRKPQQIFVDEGHT-VHFVCRADGDPPPAIMWLSPRKHLI 459
Query: 624 KTR 626
T+
Sbjct: 460 STK 462
>sp|Q9DBY4|TRIL_MOUSE TLR4 interactor with leucine rich repeats OS=Mus musculus GN=Tril
PE=2 SV=1
Length = 809
Score = 82.4 bits (202), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 137/312 (43%), Gaps = 26/312 (8%)
Query: 237 LTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYS 296
L +L RL L+ + L TF + + L+EL + +N L L+PL L L +
Sbjct: 82 LGQLRRLDLQYNQIRSLHPKTFEKLSRLEELYLGNNLLQALVPGTLAPLRKLRILYANGN 141
Query: 297 NLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHE 356
+ R+SR +F + SL L L GN L L +F L +L L L + + L + F +
Sbjct: 142 EIGRLSRGSFEGLESLVKLRLDGNVLGALPDAVFAPLGNLLYLHLESNRIRFLGKNAFSQ 201
Query: 357 NYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQI-WKNFDFLVI----LFILNETVFH 411
L L LS N L Q S+R T + ++ L++ L L VF
Sbjct: 202 ---LGKLRFLNLSANEL--------QPSLRHAATFVPLRSLSTLILSANSLQHLGPRVFQ 250
Query: 412 ENYTYPDLEELRLSGNPL-HVLPTGNLLPPQLSRLRSLDLSRCKIDYLPPNVFNNTRNIT 470
P L L LSGN L H+ P L LR L L +++ LP + ++
Sbjct: 251 H---LPRLGLLSLSGNQLTHLAPEAFW---GLEALRELRLEGNRLNQLPLTLLEPLHSLE 304
Query: 471 SLNLANNNLSMTSELSFQFLDVLLELESLDLSNNNLTHISPTVLRHNRAITSIKLVGNPW 530
+L+L+ N LS +F L E L L +N L+ +S + + A+ + L GN W
Sbjct: 305 ALDLSGNELSALHPATFGHQGRLRE---LSLRDNALSALSGDIFAASPALYRLDLDGNGW 361
Query: 531 KCDCNIADMWEW 542
CDC + + W
Sbjct: 362 TCDCRLRGLKRW 373
Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 98/330 (29%), Positives = 129/330 (39%), Gaps = 55/330 (16%)
Query: 42 LLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLT 101
L L +Q + ++P+ F L+ L +L L N L+ + PG PL L L N +
Sbjct: 85 LRRLDLQYNQIRSLHPKTFEKLSRLEELYLGNNLLQALVPGTLAPLRKLRILYANGNEIG 144
Query: 102 YISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANN 161
+S +F+ L L L L N L + D V LG L L L + I L N F+
Sbjct: 145 RLSRGSFEGLESLVKLRLDGNVLGALPD--AVFAPLGNLLYLHLESNRIRFLGKNAFSQL 202
Query: 162 TWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLS 221
LR LNL+ NEL +L H + FV L TL LS
Sbjct: 203 GKLRFLNLSANELQP---------SLRHAAT----------------FVPLRSLSTLILS 237
Query: 222 GNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTAL 281
N L V + L +L LSL L+ L F L+EL + N L L
Sbjct: 238 ANSLQHLGPRV-FQHLPRLGLLSLSGNQLTHLAPEAFWGLEALRELRLEGNRLNQLPLTL 296
Query: 282 LSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLEL 341
L PL SLE LD LSGN+L L F + L L L
Sbjct: 297 LEPLHSLEALD------------------------LSGNELSALHPATFGHQGRLRELSL 332
Query: 342 NNCGLTRLNETVFHENYTYPDLEELRLSGN 371
+ L+ L+ +F + P L L L GN
Sbjct: 333 RDNALSALSGDIFAAS---PALYRLDLDGN 359
Score = 70.1 bits (170), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 109/262 (41%), Gaps = 28/262 (10%)
Query: 32 VEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLE 91
V G R L LY + +++ F L +L KL L GN L + VF PL +L
Sbjct: 123 VPGTLAPLRKLRILYANGNEIGRLSRGSFEGLESLVKLRLDGNVLGALPDAVFAPLGNLL 182
Query: 92 YLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGIS 151
YL L + ++ +AF L L+ L LS N+L+ + L L TL L + +
Sbjct: 183 YLHLESNRIRFLGKNAFSQLGKLRFLNLSANELQPSLRHAATFVPLRSLSTLILSANSLQ 242
Query: 152 NLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVN 211
+L VF + L L+L+ N+L L+ +AF
Sbjct: 243 HLGPRVFQHLPRLGLLSLSGNQLTH---------------------------LAPEAFWG 275
Query: 212 ATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISH 271
LR L L GN L+ L++ L+PL L L L LS L TF L+EL +
Sbjct: 276 LEALRELRLEGNRLNQLPLTL-LEPLHSLEALDLSGNELSALHPATFGHQGRLRELSLRD 334
Query: 272 NPLIDAFTALLSPLESLEHLDM 293
N L + + +L LD+
Sbjct: 335 NALSALSGDIFAASPALYRLDL 356
>sp|Q9Y4C4|MFHA1_HUMAN Malignant fibrous histiocytoma-amplified sequence 1 OS=Homo sapiens
GN=MFHAS1 PE=1 SV=2
Length = 1052
Score = 82.4 bits (202), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 111/372 (29%), Positives = 161/372 (43%), Gaps = 74/372 (19%)
Query: 53 SKINPQFF--TNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDN 110
S +PQ NL + L+L N L + G+ L SL L+L R + P+ +
Sbjct: 50 SPASPQLVLPANLGDIEALNLGNNGLEEVPEGLGSALGSLRVLVLRRNRFARLPPAVAEL 109
Query: 111 LNHLKTLELSQNKLK------------------SHIDWTLV---LGNLGKLDTLDLRQSG 149
+HL L++S N+L SH + LG L L+ LD+ +
Sbjct: 110 GHHLTELDVSHNRLTALGAEVVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNR 169
Query: 150 ISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAF 209
+++LPD++ + LR L++ N+L LV L+ LD+S+ L+G L ED
Sbjct: 170 LAHLPDSLSCLSR-LRTLDVDHNQLTAFPRQLL---QLVALEELDVSSNRLRG-LPED-- 222
Query: 210 VNATK-LRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQE-- 266
++A + L+ L+LSG L L L L L L N GL LPA +F+CLQ
Sbjct: 223 ISALRALKILWLSGAELGT--LPAGFCELASLESLMLDNNGLQALPA----QFSCLQRLK 276
Query: 267 -LDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETL 325
L++S N L + F A L PL LE L + + L + S + L TL L N++ L
Sbjct: 277 MLNLSSN-LFEEFPAALLPLAGLEELYLSRNQLTSVP-SLISGLGRLLTLWLDNNRIRYL 334
Query: 326 ESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQYSM 385
S++EL LEEL L GN + VLPD Q S
Sbjct: 335 PD---------SIVELTG-------------------LEELVLQGNQIAVLPDHFGQLSR 366
Query: 386 RTIPTQIWKNFD 397
+WK D
Sbjct: 367 ----VGLWKIKD 374
Score = 66.2 bits (160), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 103/330 (31%), Positives = 149/330 (45%), Gaps = 39/330 (11%)
Query: 124 LKSHIDWTLVL-GNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATT 182
L+S LVL NLG ++ L+L +G+ +P+ + + LR L L N L A
Sbjct: 48 LESPASPQLVLPANLGDIEALNLGNNGLEEVPEGLGSALGSLRVLVLRRNRFARLPPAVA 107
Query: 183 -LGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLH 241
LG HL LD+S+ L L + +LR L LS N L A L L L L
Sbjct: 108 ELGH---HLTELDVSHNRLTA-LGAEVVSALRELRKLNLSHNQLPA--LPAQLGALAHLE 161
Query: 242 RLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRI 301
L + L+ LP ++ + L+ LD+ HN L AF L L +LE LD+ + L+ +
Sbjct: 162 ELDVSFNRLAHLP-DSLSCLSRLRTLDVDHNQLT-AFPRQLLQLVALEELDVSSNRLRGL 219
Query: 302 SRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYP 361
+ +LK L LSG +L TL +G F L L L L+N GL L +
Sbjct: 220 PED-ISALRALKILWLSGAELGTLPAG-FCELASLESLMLDNNGLQALPA----QFSCLQ 273
Query: 362 DLEELRLSGN-----PLHVLPDST------KQYSMRTIPTQIWKNFDFLVILFILNETVF 410
L+ L LS N P +LP + + + ++P+ I L+ L++ N +
Sbjct: 274 RLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTSVPSLI-SGLGRLLTLWLDNNRIR 332
Query: 411 HENYTYPD-------LEELRLSGNPLHVLP 433
+ PD LEEL L GN + VLP
Sbjct: 333 Y----LPDSIVELTGLEELVLQGNQIAVLP 358
Score = 34.7 bits (78), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 48/114 (42%), Gaps = 26/114 (22%)
Query: 418 DLEELRLSGNPLHVLPTG------------------NLLPPQLSRL----RSLDLSRCKI 455
D+E L L N L +P G LPP ++ L LD+S ++
Sbjct: 64 DIEALNLGNNGLEEVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRL 123
Query: 456 DYLPPNVFNNTRNITSLNLANNNLSMTSELSFQFLDVLLELESLDLSNNNLTHI 509
L V + R + LNL++N L L Q L L LE LD+S N L H+
Sbjct: 124 TALGAEVVSALRELRKLNLSHNQLPA---LPAQ-LGALAHLEELDVSFNRLAHL 173
>sp|P12024|CHAO_DROME Chaoptin OS=Drosophila melanogaster GN=chp PE=1 SV=2
Length = 1315
Score = 82.4 bits (202), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 131/542 (24%), Positives = 233/542 (42%), Gaps = 50/542 (9%)
Query: 24 LNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLT-TLNKLDLSGNPLRIIEP 81
+ NPI + E AF AR + +YM+ C L+ I+P F +L +L LDLSGN L +
Sbjct: 309 FDGNPIHTLREDAFKPAR-IREIYMRYCGLTNISPVAFDSLVNSLQILDLSGNNLTKLHH 367
Query: 82 GVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELS--------------QNKLKSH 127
+F+ L + + + P+ N H L+L +N +
Sbjct: 368 KLFNNFDVLRVISMRDNKIKIQKPTETFNAVHYTLLKLDLSGDRNDPTNLQTLRNMTRMR 427
Query: 128 IDWTLVLGNLG--------------KLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENE 173
+L + LG +L+ L + ++ +S + + F + L+ L+ +EN
Sbjct: 428 NMRSLSISRLGSSSVGPEDFKDFGVELEDLQITRASLSGIQSHAFKHVRGLKRLDFSENG 487
Query: 174 L--IDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLS 231
+ I+ D +G +L+ SL +S+ + L + + T L+ L S N +S+
Sbjct: 488 ISSIENDAFHEIGHSLI---SLKMSHGYSGSALPAEPLRHLTSLQELDFSNNHISSMS-D 543
Query: 232 VALKPLTKLHRLSLRNCGLSRLPANTFHR--FTCLQELDISHNPLIDAFTALLSPLESLE 289
+ L L L L + + ++ TF + L+E+ + N L LE+L
Sbjct: 544 TSFHFLKNLRLLELHDNRIEQVLKGTFQGDIHSKLEEISLRFNHLTSISQHTFFDLEALR 603
Query: 290 HLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRL 349
L + + + +I R F+ + L+ L L GNK+ L FQNL L +L++ L
Sbjct: 604 KLHLDDNKIDKIERRAFMNLDELEYLSLRGNKINNLADESFQNLPKLEILDMAFNQLPNF 663
Query: 350 NETVFHENYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETV 409
N F + T +L + +S N + L ++ +S R ++ + ++ L N ++
Sbjct: 664 NFDYFDQVGTLSNL-NVNVSHNQIRQLMYNSS-WSGRNEHGGMYHSNIKILDLSHNNISI 721
Query: 410 FHENYTYP---DLEELRLSGNPLHVLPTGNLLPPQLSRLRSLDLSRCKIDYLPPNVFNNT 466
H Y P L L L N L + T + + L+ LDLS I L + F NT
Sbjct: 722 IHPGYFRPAEISLTHLHLGYNSL--MNTTRDVFGNMPHLQWLDLSYNWIHELDFDAFKNT 779
Query: 467 RNITSLNLANNNLSMTSELSFQFLDVLLELESLDLSNNNLTHISPTVLRHNRAITSIKLV 526
+ + + +N LS + F+ + L +D S+N+L + P L +N + + +
Sbjct: 780 KQLQLVFFGHNYLSDIPQDIFK---PVQGLRIVDFSHNHLRGL-PDNLFYNGGMEKLDVS 835
Query: 527 GN 528
N
Sbjct: 836 HN 837
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 95/332 (28%), Positives = 149/332 (44%), Gaps = 63/332 (18%)
Query: 69 LDLSGNPLRIIEPGVFDPL-TSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSH 127
LDLS N + II PG F P SL +L L +L + F N+ HL+ L+LS N +
Sbjct: 712 LDLSHNNISIIHPGYFRPAEISLTHLHLGYNSLMNTTRDVFGNMPHLQWLDLSYNWIHE- 770
Query: 128 IDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNL 187
+D+ N +L + + +S++P ++F LR ++ + N L L NL
Sbjct: 771 LDFD-AFKNTKQLQLVFFGHNYLSDIPQDIFKPVQGLRIVDFSHNHL------RGLPDNL 823
Query: 188 VH---LDSLDLS-NCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRL 243
+ ++ LD+S N LK P S + + A L L+LS N +S +H +
Sbjct: 824 FYNGGMEKLDVSHNMMLKIPSSSLSSLAALTLCELHLSNNFIST------------IHSM 871
Query: 244 SLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLD----------- 292
L N +F L+ LDIS+N L+ A+ + + L LD
Sbjct: 872 DLSN------------KFRSLRYLDISYNYLLRIDDAVFATMPKLAVLDLSHNRDLKVMD 919
Query: 293 ---MGYSN------LQRISRSTF--LKMTSLKTLILSGNKLETLESGLFQNLTHLSVLEL 341
MG N L+ IS ST +++ L+ L N+L ++ L N+++L +L+L
Sbjct: 920 KSFMGLENSLIKLGLENISLSTVPEIRLKYLREFRLGYNELPSIPQELAHNMSNLRMLDL 979
Query: 342 NNCGLTRLNETVFHENYTYPDLEELRLSGNPL 373
+N LT + P L L LSGNP+
Sbjct: 980 SNNDLTNVPLMT----QALPHLRRLMLSGNPI 1007
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 116/497 (23%), Positives = 198/497 (39%), Gaps = 101/497 (20%)
Query: 42 LLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLT-SLEYLMLNRCNL 100
+ L+M+ L +I P +F T + +L +SGN L I F L SL L+L + +L
Sbjct: 81 VFMLHMENTGLREIEP-YFLQSTGMYRLKISGNHLTEIPDDAFTGLERSLWELILPQNDL 139
Query: 101 TYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFAN 160
I + +L L+ L+L N + +HI G L TL LR++ IS
Sbjct: 140 VEIPSKSLRHLQKLRHLDLGYNHI-THIQHDSFRGLEDSLQTLILRENCISQ-------- 190
Query: 161 NTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYL 220
L +F L TL L
Sbjct: 191 -------------------------------------------LMSHSFSGLLILETLDL 207
Query: 221 SGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLI----- 275
SGN L D +V + + +L RL L + LS +P + L+ LDISHN +
Sbjct: 208 SGNNLFEIDPNVFVDGMPRLTRLLLTDNILSEIPYDALGPLKSLRTLDISHNVIWSLSGN 267
Query: 276 DAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTH 335
+ + S +L++L + Y++++ + ++F ++ GN + TL F+
Sbjct: 268 ETYEIKASTKLNLDNLHLEYNHIEVLPPNSFKYFDTVNRTFFDGNPIHTLREDAFKP-AR 326
Query: 336 LSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKN 395
+ + + CGLT ++ F + L+ L LSGN L TK + +++ N
Sbjct: 327 IREIYMRYCGLTNISPVAF--DSLVNSLQILDLSGNNL------TKLHH------KLFNN 372
Query: 396 FDFLVILFILNETVFHENYTYPDLEELRLSGNPLHVLPTGNLLPPQLSRLRSLDLSRCKI 455
FD L ++ + + + +++ + N +H L LDLS +
Sbjct: 373 FDVLRVISMRDNKI--------KIQKPTETFNAVHY------------TLLKLDLSGDRN 412
Query: 456 DYLPPNVFNNTRNITSL----NLANNNLSMTSELSFQFLDVLLELESLDLSNNNLTHISP 511
D P RN+T + +L+ + L +S F D +ELE L ++ +L+ I
Sbjct: 413 D---PTNLQTLRNMTRMRNMRSLSISRLGSSSVGPEDFKDFGVELEDLQITRASLSGIQS 469
Query: 512 TVLRHNRAITSIKLVGN 528
+H R + + N
Sbjct: 470 HAFKHVRGLKRLDFSEN 486
Score = 60.8 bits (146), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 127/501 (25%), Positives = 211/501 (42%), Gaps = 52/501 (10%)
Query: 41 SLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVF-DPLTSLEYLMLNRCN 99
SL L ++E +S++ F+ L L LDLSGN L I+P VF D + L L+L
Sbjct: 177 SLQTLILRENCISQLMSHSFSGLLILETLDLSGNNLFEIDPNVFVDGMPRLTRLLLTDNI 236
Query: 100 LTYISPSAFDNLNHLKTLELSQN---KLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDN 156
L+ I A L L+TL++S N L + + + LD L L + I LP N
Sbjct: 237 LSEIPYDALGPLKSLRTLDISHNVIWSLSGNETYEIKASTKLNLDNLHLEYNHIEVLPPN 296
Query: 157 VFANNTWLRNLNLAENELIDLDVATTLGQNL---VHLDSLDLSNCHLK--GPLSEDAFVN 211
F + + D + TL ++ + + + C L P++ D+ VN
Sbjct: 297 SF------KYFDTVNRTFFDGNPIHTLREDAFKPARIREIYMRYCGLTNISPVAFDSLVN 350
Query: 212 ATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLS-RLPANTFH--RFTCLQELD 268
+ L+ L LSGN L+ + L +S+R+ + + P TF+ +T L+ LD
Sbjct: 351 S--LQILDLSGNNLTKLHHKL-FNNFDVLRVISMRDNKIKIQKPTETFNAVHYTLLK-LD 406
Query: 269 IS---HNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKM-TSLKTLILSGNKLET 324
+S ++P ++ + ++ L + + F L+ L ++ L
Sbjct: 407 LSGDRNDPTNLQTLRNMTRMRNMRSLSISRLGSSSVGPEDFKDFGVELEDLQITRASLSG 466
Query: 325 LESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLS---------GNPL-H 374
++S F+++ L L+ + G++ + FHE L L++S PL H
Sbjct: 467 IQSHAFKHVRGLKRLDFSENGISSIENDAFHE--IGHSLISLKMSHGYSGSALPAEPLRH 524
Query: 375 VLPDSTKQYSMRTIPTQIWKNFDFLVILFILN------ETVFHENYT---YPDLEELRLS 425
+ +S I + +F FL L +L E V + + LEE+ L
Sbjct: 525 LTSLQELDFSNNHISSMSDTSFHFLKNLRLLELHDNRIEQVLKGTFQGDIHSKLEEISLR 584
Query: 426 GNPLHVLPTGNLLPPQLSRLRSLDLSRCKIDYLPPNVFNNTRNITSLNLANNNLSMTSEL 485
N L + L LR L L KID + F N + L+L N ++ ++
Sbjct: 585 FNHLTSISQHTFF--DLEALRKLHLDDNKIDKIERRAFMNLDELEYLSLRGNKINNLADE 642
Query: 486 SFQFLDVLLELESLDLSNNNL 506
SFQ L +LE LD++ N L
Sbjct: 643 SFQNLP---KLEILDMAFNQL 660
Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 140/345 (40%), Gaps = 56/345 (16%)
Query: 210 VNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFT-CLQELD 268
VN +K+ L++ L ++ T ++RL + L+ +P + F L EL
Sbjct: 76 VNQSKVFMLHMENTGLR--EIEPYFLQSTGMYRLKISGNHLTEIPDDAFTGLERSLWELI 133
Query: 269 ISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMT-SLKTLILSGNKLETLES 327
+ N L++ + L L+ L HLD+GY+++ I +F + SL+TLIL N + L S
Sbjct: 134 LPQNDLVEIPSKSLRHLQKLRHLDLGYNHITHIQHDSFRGLEDSLQTLILRENCISQLMS 193
Query: 328 GLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDST--KQYSM 385
F L L L+L+ L ++ VF + P L L L+ N L +P S+
Sbjct: 194 HSFSGLLILETLDLSGNNLFEIDPNVFVDGM--PRLTRLLLTDNILSEIPYDALGPLKSL 251
Query: 386 RTIPTQ---IWK---------------NFDFLVILFILNETVFHENYTYPD-LEELRLSG 426
RT+ IW N D L + + E + ++ Y D + G
Sbjct: 252 RTLDISHNVIWSLSGNETYEIKASTKLNLDNLHLEYNHIEVLPPNSFKYFDTVNRTFFDG 311
Query: 427 NPLHVLPTGNLLPPQLSRLRSLDLSRCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELS 486
NP+H L P +R+R + + C + + P F++ N
Sbjct: 312 NPIHTLREDAFKP---ARIREIYMRYCGLTNISPVAFDSLVN------------------ 350
Query: 487 FQFLDVLLELESLDLSNNNLTHISPTVLRHNRAITSIKLVGNPWK 531
L+ LDLS NNLT + + + + I + N K
Sbjct: 351 --------SLQILDLSGNNLTKLHHKLFNNFDVLRVISMRDNKIK 387
Score = 53.5 bits (127), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 119/546 (21%), Positives = 214/546 (39%), Gaps = 127/546 (23%)
Query: 45 LYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDP------------------ 86
L + +LS I F ++ L +LD S N + IE F
Sbjct: 457 LQITRASLSGIQSHAFKHVRGLKRLDFSENGISSIENDAFHEIGHSLISLKMSHGYSGSA 516
Query: 87 --------LTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLG 138
LTSL+ L + +++ +S ++F L +L+ LEL N+++ + T
Sbjct: 517 LPAEPLRHLTSLQELDFSNNHISSMSDTSFHFLKNLRLLELHDNRIEQVLKGTFQGDIHS 576
Query: 139 KLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNC 198
KL+ + LR + ++++ + F + LR L+L +N++ ++ + NL L+ L L
Sbjct: 577 KLEEISLRFNHLTSISQHTFFDLEALRKLHLDDNKIDKIERRAFM--NLDELEYLSLRGN 634
Query: 199 HLKGPLSEDAFVNATKLRTLYLSGNPL--------------SAADLSVALKPLTKLHRLS 244
+ L++++F N KL L ++ N L S +++V+ + +L
Sbjct: 635 KINN-LADESFQNLPKLEILDMAFNQLPNFNFDYFDQVGTLSNLNVNVSHNQIRQL---- 689
Query: 245 LRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLE-SLEHLDMGYSNLQRISR 303
+ N S + + ++ LD+SHN + P E SL HL +GY++L +R
Sbjct: 690 MYNSSWSGRNEHGGMYHSNIKILDLSHNNISIIHPGYFRPAEISLTHLHLGYNSLMNTTR 749
Query: 304 STFLKMTSLKTLILS------------------------GNKLETLESGLFQNLTHLSVL 339
F M L+ L LS N L + +F+ + L ++
Sbjct: 750 DVFGNMPHLQWLDLSYNWIHELDFDAFKNTKQLQLVFFGHNYLSDIPQDIFKPVQGLRIV 809
Query: 340 ELNNCGLTRLNETVFHEN----------------------YTYPDLEELRLSGN---PLH 374
+ ++ L L + +F+ L EL LS N +H
Sbjct: 810 DFSHNHLRGLPDNLFYNGGMEKLDVSHNMMLKIPSSSLSSLAALTLCELHLSNNFISTIH 869
Query: 375 VLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTYPDLEELRLSGN------- 427
+ S K S+R + I N+ L +++ VF T P L L LS N
Sbjct: 870 SMDLSNKFRSLRYL--DISYNY-----LLRIDDAVF---ATMPKLAVLDLSHNRDLKVMD 919
Query: 428 -------------PLHVLPTGNLLPPQLSRLRSLDLSRCKIDYLPPNVFNNTRNITSLNL 474
L + + +L LR L ++ +P + +N N+ L+L
Sbjct: 920 KSFMGLENSLIKLGLENISLSTVPEIRLKYLREFRLGYNELPSIPQELAHNMSNLRMLDL 979
Query: 475 ANNNLS 480
+NN+L+
Sbjct: 980 SNNDLT 985
>sp|Q3URE9|LIGO2_MOUSE Leucine-rich repeat and immunoglobulin-like domain-containing nogo
receptor-interacting protein 2 OS=Mus musculus GN=Lingo2
PE=2 SV=1
Length = 606
Score = 82.4 bits (202), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 139/292 (47%), Gaps = 6/292 (2%)
Query: 52 LSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNL 111
L INP+ F + L ++DLS N + +EPG F+ L +L L L L + F L
Sbjct: 69 LKSINPEEFISYPLLEEIDLSDNIIANVEPGAFNNLFNLRSLRLKGNRLKLVPLGVFTGL 128
Query: 112 NHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAE 171
++L L++S+NK+ +D+ + +L L +L++ + + + F+ L L L +
Sbjct: 129 SNLTKLDISENKIVILLDY--MFQDLHNLKSLEVGDNDLVYISHRAFSGLLSLEQLTLEK 186
Query: 172 NELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLS 231
L V T +L L +L L + ++ + AF L+ L + PL +
Sbjct: 187 CNLT--AVPTEALSHLRSLIALHLKHLNINN-MPVYAFKRLFHLKNLEIDYWPLLDLMPA 243
Query: 232 VALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHL 291
+L L L LS+ N LS +P F L L++S+NP+ + S L L+ L
Sbjct: 244 NSLYGL-NLTSLSITNTNLSTVPFLAFKHLVYLTHLNLSYNPISTIEAGMFSDLIRLQEL 302
Query: 292 DMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNN 343
+ + L+ I +F + L+ L +S N LETLE +F + L VL +NN
Sbjct: 303 HIVGAQLRTIEPHSFQGLRFLRVLNVSQNLLETLEENVFSSPRALEVLSINN 354
Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 139/329 (42%), Gaps = 57/329 (17%)
Query: 69 LDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHI 128
LDLS N L+ I P F LE + L+ + + P AF+NL +L++L L N+LK +
Sbjct: 62 LDLSKNRLKSINPEEFISYPLLEEIDLSDNIIANVEPGAFNNLFNLRSLRLKGNRLK--L 119
Query: 129 DWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLV 188
V L L LD+ ++ I L D +F + L++L + +N+L+ + G L+
Sbjct: 120 VPLGVFTGLSNLTKLDISENKIVILLDYMFQDLHNLKSLEVGDNDLVYISHRAFSG--LL 177
Query: 189 HLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNC 248
L+ L L C+L +E AL L L L L++
Sbjct: 178 SLEQLTLEKCNLTAVPTE--------------------------ALSHLRSLIALHLKHL 211
Query: 249 GLSRLPANTFHRFTCLQELDISHNPLIDAFTA------------------------LLSP 284
++ +P F R L+ L+I + PL+D A
Sbjct: 212 NINNMPVYAFKRLFHLKNLEIDYWPLLDLMPANSLYGLNLTSLSITNTNLSTVPFLAFKH 271
Query: 285 LESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNC 344
L L HL++ Y+ + I F + L+ L + G +L T+E FQ L L VL ++
Sbjct: 272 LVYLTHLNLSYNPISTIEAGMFSDLIRLQELHIVGAQLRTIEPHSFQGLRFLRVLNVSQN 331
Query: 345 GLTRLNETVFHENYTYPDLEELRLSGNPL 373
L L E VF LE L ++ NPL
Sbjct: 332 LLETLEENVFSSPRA---LEVLSINNNPL 357
Score = 66.6 bits (161), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 132/279 (47%), Gaps = 9/279 (3%)
Query: 17 PGLITINLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNP 75
P L I+L+ N I VE GAF +L L ++ L + FT L+ L KLD+S N
Sbjct: 81 PLLEEIDLSDNIIANVEPGAFNNLFNLRSLRLKGNRLKLVPLGVFTGLSNLTKLDISENK 140
Query: 76 LRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLG 135
+ I+ +F L +L+ L + +L YIS AF L L+ L L + L + T L
Sbjct: 141 IVILLDYMFQDLHNLKSLEVGDNDLVYISHRAFSGLLSLEQLTLEKCNLTAVP--TEALS 198
Query: 136 NLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTL-GQNLVHLDSLD 194
+L L L L+ I+N+P F L+NL + L+DL A +L G NL SL
Sbjct: 199 HLRSLIALHLKHLNINNMPVYAFKRLFHLKNLEIDYWPLLDLMPANSLYGLNLT---SLS 255
Query: 195 LSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLP 254
++N +L + AF + L L LS NP+S + + L +L L + L +
Sbjct: 256 ITNTNLS-TVPFLAFKHLVYLTHLNLSYNPISTIEAGM-FSDLIRLQELHIVGAQLRTIE 313
Query: 255 ANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDM 293
++F L+ L++S N L + S +LE L +
Sbjct: 314 PHSFQGLRFLRVLNVSQNLLETLEENVFSSPRALEVLSI 352
Score = 56.2 bits (134), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 140/348 (40%), Gaps = 44/348 (12%)
Query: 193 LDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSR 252
LDLS LK ++ + F++ L + LS N ++ + A L L L L+ L
Sbjct: 62 LDLSKNRLKS-INPEEFISYPLLEEIDLSDNIIANVEPG-AFNNLFNLRSLRLKGNRLKL 119
Query: 253 LPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSL 312
+P F + L +LDIS N ++ + L +L+ L++G ++L IS F + SL
Sbjct: 120 VPLGVFTGLSNLTKLDISENKIVILLDYMFQDLHNLKSLEVGDNDLVYISHRAFSGLLSL 179
Query: 313 KTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNP 372
+ L L L + + +L L L L + + + F + L+ L + P
Sbjct: 180 EQLTLEKCNLTAVPTEALSHLRSLIALHLKHLNINNMPVYAFKRLF---HLKNLEIDYWP 236
Query: 373 LHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTYPDLEELRLSGNPLHVL 432
L L + Y + I N + + F+ + + + L L LS NP+ +
Sbjct: 237 LLDLMPANSLYGLNLTSLSI-TNTNLSTVPFLAFKHLVY-------LTHLNLSYNPISTI 288
Query: 433 PTGNLLPPQLSRLRSLDLSRCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSFQFLDV 492
G + L RL+ L + ++ + P+ F R + LN++ N L E F
Sbjct: 289 EAG--MFSDLIRLQELHIVGAQLRTIEPHSFQGLRFLRVLNVSQNLLETLEENVFS---- 342
Query: 493 LLELESLDLSNNNLTHISPTVLRHNRAITSIKLVGNPWKCDCNIADMW 540
SP RA+ + + NP CDC + +W
Sbjct: 343 -----------------SP------RALEVLSINNNPLACDCRL--LW 365
>sp|Q7L985|LIGO2_HUMAN Leucine-rich repeat and immunoglobulin-like domain-containing nogo
receptor-interacting protein 2 OS=Homo sapiens GN=LINGO2
PE=1 SV=1
Length = 606
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 139/292 (47%), Gaps = 6/292 (2%)
Query: 52 LSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNL 111
L +NP+ F + L ++DLS N + +EPG F+ L +L L L L + F L
Sbjct: 69 LKSVNPEEFISYPLLEEIDLSDNIIANVEPGAFNNLFNLRSLRLKGNRLKLVPLGVFTGL 128
Query: 112 NHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAE 171
++L L++S+NK+ +D+ + +L L +L++ + + + F+ L L L +
Sbjct: 129 SNLTKLDISENKIVILLDY--MFQDLHNLKSLEVGDNDLVYISHRAFSGLLSLEQLTLEK 186
Query: 172 NELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLS 231
L V T +L L SL L + ++ + AF L+ L + PL +
Sbjct: 187 CNLT--AVPTEALSHLRSLISLHLKHLNINN-MPVYAFKRLFHLKHLEIDYWPLLDMMPA 243
Query: 232 VALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHL 291
+L L L LS+ N LS +P F L L++S+NP+ + S L L+ L
Sbjct: 244 NSLYGL-NLTSLSVTNTNLSTVPFLAFKHLVYLTHLNLSYNPISTIEAGMFSDLIRLQEL 302
Query: 292 DMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNN 343
+ + L+ I +F + L+ L +S N LETLE +F + L VL +NN
Sbjct: 303 HIVGAQLRTIEPHSFQGLRFLRVLNVSQNLLETLEENVFSSPRALEVLSINN 354
Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 133/279 (47%), Gaps = 9/279 (3%)
Query: 17 PGLITINLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNP 75
P L I+L+ N I VE GAF +L L ++ L + FT L+ L KLD+S N
Sbjct: 81 PLLEEIDLSDNIIANVEPGAFNNLFNLRSLRLKGNRLKLVPLGVFTGLSNLTKLDISENK 140
Query: 76 LRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLG 135
+ I+ +F L +L+ L + +L YIS AF L L+ L L + L + T L
Sbjct: 141 IVILLDYMFQDLHNLKSLEVGDNDLVYISHRAFSGLLSLEQLTLEKCNLTAVP--TEALS 198
Query: 136 NLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTL-GQNLVHLDSLD 194
+L L +L L+ I+N+P F L++L + L+D+ A +L G NL SL
Sbjct: 199 HLRSLISLHLKHLNINNMPVYAFKRLFHLKHLEIDYWPLLDMMPANSLYGLNLT---SLS 255
Query: 195 LSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLP 254
++N +L + AF + L L LS NP+S + + L +L L + L +
Sbjct: 256 VTNTNLS-TVPFLAFKHLVYLTHLNLSYNPISTIEAGM-FSDLIRLQELHIVGAQLRTIE 313
Query: 255 ANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDM 293
++F L+ L++S N L + S +LE L +
Sbjct: 314 PHSFQGLRFLRVLNVSQNLLETLEENVFSSPRALEVLSI 352
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 123/296 (41%), Gaps = 20/296 (6%)
Query: 258 FHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLIL 317
F + L+E+D+S N + + + L +L L + + L+ + F +++L L +
Sbjct: 77 FISYPLLEEIDLSDNIIANVEPGAFNNLFNLRSLRLKGNRLKLVPLGVFTGLSNLTKLDI 136
Query: 318 SGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPD--LEELRLSGNPLHV 375
S NK+ L +FQ+L +L LE+ + L ++ F + LE+ L+ P
Sbjct: 137 SENKIVILLDYMFQDLHNLKSLEVGDNDLVYISHRAFSGLLSLEQLTLEKCNLTAVPTEA 196
Query: 376 LPD-------STKQYSMRTIPTQIWKNFDFLVILFI----LNETVFHENYTYPDLEELRL 424
L K ++ +P +K L L I L + + + +L L +
Sbjct: 197 LSHLRSLISLHLKHLNINNMPVYAFKRLFHLKHLEIDYWPLLDMMPANSLYGLNLTSLSV 256
Query: 425 SGNPLHVLPTGNLLPPQLSRLRSLDLSRCKIDYLPPNVFNNTRNITSLNLANNNLSMTSE 484
+ L +P L L L L+LS I + +F++ + L++ L
Sbjct: 257 TNTNLSTVPF--LAFKHLVYLTHLNLSYNPISTIEAGMFSDLIRLQELHIVGAQLRTIEP 314
Query: 485 LSFQFLDVLLELESLDLSNNNLTHISPTVLRHNRAITSIKLVGNPWKCDCNIADMW 540
SFQ L L L++S N L + V RA+ + + NP CDC + +W
Sbjct: 315 HSFQGLRF---LRVLNVSQNLLETLEENVFSSPRALEVLSINNNPLACDCRL--LW 365
>sp|Q9WVB4|SLIT3_MOUSE Slit homolog 3 protein OS=Mus musculus GN=Slit3 PE=2 SV=2
Length = 1523
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 140/615 (22%), Positives = 233/615 (37%), Gaps = 111/615 (18%)
Query: 18 GLITINLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPL 76
G++ I L N I+ + GAF + L + + + +S I P F L +L L L GN +
Sbjct: 308 GIVEIRLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKI 367
Query: 77 RIIEPGVFDP------------------------LTSLEYLMLNRCNLTYISPSAFDNLN 112
I G+FD L +L L L L IS F L
Sbjct: 368 TEIPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFVPLQ 427
Query: 113 HLKTLELSQNKL--KSHIDW---------------------TLVLGNLGKLDTLDLRQSG 149
++TL L+QN H+ W L + ++ + R SG
Sbjct: 428 SIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPRRLANKRISQIKSKKFRCSG 487
Query: 150 ISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAF 209
+ N F++ ++ +L E + + Q L + S HL ++
Sbjct: 488 SEDY-RNRFSSECFM-DLVCPEKCRCEGTIVDCSNQKLARIPS------HLPEYTTD--- 536
Query: 210 VNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDI 269
L L+ N +S + + K L L +++L N + + F +QEL +
Sbjct: 537 --------LRLNDNDISVLEATGIFKKLPNLRKINLSNNRIKEVREGAFDGAAGVQELML 588
Query: 270 SHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGL 329
+ N L + L SL+ L + + + +S TF ++S++ L L N++ T+ G
Sbjct: 589 TGNQLETMHGRMFRGLSSLKTLMLRSNLISCVSNDTFAGLSSVRLLSLYDNRITTITPGA 648
Query: 330 FQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRL-SGNPLHVLPDSTKQYSMRTI 388
F L LS + L L+ H + L + R+ SGN P K + ++ I
Sbjct: 649 FTTLVSLSTINL----LSNPFNCNCHMAWLGRWLRKRRIVSGN-----PRCQKPFFLKEI 699
Query: 389 PTQIWKNFDFLVILFILNETVFHENYTYPDLEE--------LRLSGNPLHVLPTG----- 435
P Q D + F + P E +R S LH LP G
Sbjct: 700 PIQ-----DVAIQDFTCDGNEESSCQLSPRCPEQCTCVETVVRCSNRGLHALPKGMPKDV 754
Query: 436 ----------NLLPPQLSRLRSL---DLSRCKIDYLPPNVFNNTRNITSLNLANNNLSMT 482
+P +LS R L DLS I L + F+N ++++L L+ N L
Sbjct: 755 TELYLEGNHLTAVPKELSAFRQLTLIDLSNNSISMLTNHTFSNMSHLSTLILSYNRLRCI 814
Query: 483 SELSFQFLDVLLELESLDLSNNNLTHISPTVLRHNRAITSIKLVGNPWKCDCNIADMWEW 542
+F + L L L L N+++ + +++ + L NP CDC++ + EW
Sbjct: 815 PVHAF---NGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGTNPLHCDCSLRWLSEW 871
Query: 543 ATREKGDIGVLVGST 557
+ G+ S+
Sbjct: 872 VKAGYKEPGIARCSS 886
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 87/175 (49%), Gaps = 11/175 (6%)
Query: 406 NETVFHENYTYPDL---EELRLSGNPLHVLPTGNLLPPQLSRLRSLDLSRCKIDYLPPNV 462
N+ E + DL E LRL+ N L VLP LL +L LDLS +I +P
Sbjct: 95 NQVSIIERGAFQDLKQLERLRLNKNKLQVLP--ELLFQSTPKLTRLDLSENQIQGIPRKA 152
Query: 463 FNNTRNITSLNLANNNLSMTSELSFQFLDVLLELESLDLSNNNLTHISPTVLRHNRAITS 522
F + +L L NN++S + +F+ L +LE L L+NNN++ I T H I +
Sbjct: 153 FRGVTGVKNLQLDNNHISCIEDGAFR---ALRDLEILTLNNNNISRILVTSFNHMPKIRT 209
Query: 523 IKLVGNPWKCDCNIADMWEWATREKGDIGVLVGSTTPTEI-GFG-ASRKKKGLVC 575
++L N CDC++A + +W R++ IG P + GF A +KK VC
Sbjct: 210 LRLHSNHLYCDCHLAWLSDW-LRQRRTIGQFTLCMAPVHLRGFSVADVQKKEYVC 263
Score = 69.7 bits (169), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 135/610 (22%), Positives = 223/610 (36%), Gaps = 125/610 (20%)
Query: 22 INLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIE 80
+ LN N +Q + E F L L + E + I + F +T + L L N + IE
Sbjct: 114 LRLNKNKLQVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGVTGVKNLQLDNNHISCIE 173
Query: 81 PGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKL--KSHIDWTLVLGNLG 138
G F L LE L LN N++ I ++F+++ ++TL L N L H+ W
Sbjct: 174 DGAFRALRDLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAW-------- 225
Query: 139 KLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNC 198
L D WLR TL VHL +++
Sbjct: 226 --------------LSD-------WLRQRRTIGQ--------FTLCMAPVHLRGFSVADV 256
Query: 199 HLK-----GPLSEDAFVNATKLR---TLYLSGNPLSAADLSVALKPLT---KLHRLSLRN 247
K GP SE NA L S N + + P + + L
Sbjct: 257 QKKEYVCPGPHSEAPACNANSLSCPSACSCSNNIVDCRGKGLTEIPANLPEGIVEIRLEQ 316
Query: 248 CGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFL 307
+ +PA F ++ L+ +DIS N + D L+SL L + + + I + F
Sbjct: 317 NSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIPKGLFD 376
Query: 308 KMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELR 367
+ SL+ L+L+ NK+ L FQ+L +L++L L + L +++ +F ++ L
Sbjct: 377 GLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLF---VPLQSIQTLH 433
Query: 368 LSGNP------LHVLPD--------------------------STKQYSMRTIPTQIWKN 395
L+ NP L L D K R ++ ++N
Sbjct: 434 LAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPRRLANKRISQIKSKKFRCSGSEDYRN 493
Query: 396 -FDFLVILFILNETVFHENYTYPDLEELRLSGNPLH----------------VLPTGNLL 438
F + ++ T D +L+ P H VL +
Sbjct: 494 RFSSECFMDLVCPEKCRCEGTIVDCSNQKLARIPSHLPEYTTDLRLNDNDISVLEATGIF 553
Query: 439 PPQLSRLRSLDLSRCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSFQFL-------- 490
+L LR ++LS +I + F+ + L L N L F+ L
Sbjct: 554 -KKLPNLRKINLSNNRIKEVREGAFDGAAGVQELMLTGNQLETMHGRMFRGLSSLKTLML 612
Query: 491 ----------DVLLELES---LDLSNNNLTHISPTVLRHNRAITSIKLVGNPWKCDCNIA 537
D L S L L +N +T I+P ++++I L+ NP+ C+C++A
Sbjct: 613 RSNLISCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNCHMA 672
Query: 538 DMWEWATREK 547
+ W + +
Sbjct: 673 WLGRWLRKRR 682
Score = 56.6 bits (135), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 128/331 (38%), Gaps = 57/331 (17%)
Query: 209 FVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELD 268
F LR L+L N +S + A + L +L RL L L LP F L LD
Sbjct: 81 FAGLKNLRVLHLEDNQVSIIERG-AFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLD 139
Query: 269 ISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESG 328
+S N +Q I R F +T +K L L N + +E G
Sbjct: 140 LSEN------------------------QIQGIPRKAFRGVTGVKNLQLDNNHISCIEDG 175
Query: 329 LFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHV------LPDSTKQ 382
F+ L L +L LNN ++R+ T F+ P + LRL N L+ L D +Q
Sbjct: 176 AFRALRDLEILTLNNNNISRILVTSFNH---MPKIRTLRLHSNHLYCDCHLAWLSDWLRQ 232
Query: 383 YSMRTIPTQIWKNFDFLVILFILNETVFH-ENYTYPDLEELR-LSGNPLHVLPTGN---L 437
RTI F L H ++ D+++ + P P N L
Sbjct: 233 --RRTIGQ------------FTLCMAPVHLRGFSVADVQKKEYVCPGPHSEAPACNANSL 278
Query: 438 LPPQLSRLRSLDLSRCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSFQFLDVLLELE 497
P S ++ C+ L N I + L N++ +F +L+
Sbjct: 279 SCPSACSC-SNNIVDCRGKGLTEIPANLPEGIVEIRLEQNSIKSIPAGAFTQYK---KLK 334
Query: 498 SLDLSNNNLTHISPTVLRHNRAITSIKLVGN 528
+D+S N ++ I+P + +++TS+ L GN
Sbjct: 335 RIDISKNQISDIAPDAFQGLKSLTSLVLYGN 365
Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 3/89 (3%)
Query: 289 EHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTR 348
E LD+ +N+ RI++ F + +L+ L L N++ +E G FQ+L L L LN L
Sbjct: 64 ERLDLDRNNITRITKMDFAGLKNLRVLHLEDNQVSIIERGAFQDLKQLERLRLNKNKLQV 123
Query: 349 LNETVFHENYTYPDLEELRLSGNPLHVLP 377
L E +F + P L L LS N + +P
Sbjct: 124 LPELLFQ---STPKLTRLDLSENQIQGIP 149
>sp|Q496Z2|TRIL_RAT TLR4 interactor with leucine rich repeats OS=Rattus norvegicus
GN=Tril PE=2 SV=1
Length = 811
Score = 80.9 bits (198), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 136/312 (43%), Gaps = 26/312 (8%)
Query: 237 LTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYS 296
L +L RL L+ + L TF + + L+EL + +N L L+PL L L +
Sbjct: 82 LGQLRRLDLQYNQIRSLHPKTFEKLSRLEELYLGNNLLQALAPGTLAPLRKLRILYANGN 141
Query: 297 NLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHE 356
+ R+SR +F + SL L L GN L L +F L +L L L + L + F +
Sbjct: 142 EIGRLSRGSFEGLESLVKLRLDGNVLGALPDAVFAPLGNLLYLHLEANRIRFLGKNAFTQ 201
Query: 357 NYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQI-WKNFDFLVI----LFILNETVFH 411
L L LS N L Q S+R T + ++ L++ L L VF
Sbjct: 202 ---LGKLRFLNLSANEL--------QPSLRHAATFVPLRSLSTLILSANSLQHLGPRVFQ 250
Query: 412 ENYTYPDLEELRLSGNPL-HVLPTGNLLPPQLSRLRSLDLSRCKIDYLPPNVFNNTRNIT 470
P L L LSGN L H+ P L LR L L +++ LP + ++
Sbjct: 251 H---LPRLGLLSLSGNQLTHLAPEAFW---GLEALRELRLEGNRLNQLPLTLLEPLHSLE 304
Query: 471 SLNLANNNLSMTSELSFQFLDVLLELESLDLSNNNLTHISPTVLRHNRAITSIKLVGNPW 530
+L+L+ N LS +F L E L L +N L+ +S + + A+ + L GN W
Sbjct: 305 ALDLSGNELSALHPATFGHQGRLRE---LSLRDNALSALSGDIFAASPALYRLDLDGNGW 361
Query: 531 KCDCNIADMWEW 542
CDC + + W
Sbjct: 362 TCDCRLRGLKRW 373
Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 98/330 (29%), Positives = 128/330 (38%), Gaps = 55/330 (16%)
Query: 42 LLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLT 101
L L +Q + ++P+ F L+ L +L L N L+ + PG PL L L N +
Sbjct: 85 LRRLDLQYNQIRSLHPKTFEKLSRLEELYLGNNLLQALAPGTLAPLRKLRILYANGNEIG 144
Query: 102 YISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANN 161
+S +F+ L L L L N L + D V LG L L L + I L N F
Sbjct: 145 RLSRGSFEGLESLVKLRLDGNVLGALPD--AVFAPLGNLLYLHLEANRIRFLGKNAFTQL 202
Query: 162 TWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLS 221
LR LNL+ NEL +L H + FV L TL LS
Sbjct: 203 GKLRFLNLSANELQP---------SLRHAAT----------------FVPLRSLSTLILS 237
Query: 222 GNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTAL 281
N L V + L +L LSL L+ L F L+EL + N L L
Sbjct: 238 ANSLQHLGPRV-FQHLPRLGLLSLSGNQLTHLAPEAFWGLEALRELRLEGNRLNQLPLTL 296
Query: 282 LSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLEL 341
L PL SLE LD LSGN+L L F + L L L
Sbjct: 297 LEPLHSLEALD------------------------LSGNELSALHPATFGHQGRLRELSL 332
Query: 342 NNCGLTRLNETVFHENYTYPDLEELRLSGN 371
+ L+ L+ +F + P L L L GN
Sbjct: 333 RDNALSALSGDIFAAS---PALYRLDLDGN 359
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 108/260 (41%), Gaps = 28/260 (10%)
Query: 34 GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYL 93
G R L LY + +++ F L +L KL L GN L + VF PL +L YL
Sbjct: 125 GTLAPLRKLRILYANGNEIGRLSRGSFEGLESLVKLRLDGNVLGALPDAVFAPLGNLLYL 184
Query: 94 MLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNL 153
L + ++ +AF L L+ L LS N+L+ + L L TL L + + +L
Sbjct: 185 HLEANRIRFLGKNAFTQLGKLRFLNLSANELQPSLRHAATFVPLRSLSTLILSANSLQHL 244
Query: 154 PDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNAT 213
VF + L L+L+ N+L L+ +AF
Sbjct: 245 GPRVFQHLPRLGLLSLSGNQLTH---------------------------LAPEAFWGLE 277
Query: 214 KLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNP 273
LR L L GN L+ L++ L+PL L L L LS L TF L+EL + N
Sbjct: 278 ALRELRLEGNRLNQLPLTL-LEPLHSLEALDLSGNELSALHPATFGHQGRLRELSLRDNA 336
Query: 274 LIDAFTALLSPLESLEHLDM 293
L + + +L LD+
Sbjct: 337 LSALSGDIFAASPALYRLDL 356
Score = 57.4 bits (137), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 97/208 (46%), Gaps = 8/208 (3%)
Query: 19 LITINLNANPIQPVEGA-FLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLR 77
L+ + L+ N + + A F +LLYL+++ + + FT L L L+LS N L+
Sbjct: 157 LVKLRLDGNVLGALPDAVFAPLGNLLYLHLEANRIRFLGKNAFTQLGKLRFLNLSANELQ 216
Query: 78 --IIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLG 135
+ F PL SL L+L+ +L ++ P F +L L L LS N+L +H+ G
Sbjct: 217 PSLRHAATFVPLRSLSTLILSANSLQHLGPRVFQHLPRLGLLSLSGNQL-THLAPEAFWG 275
Query: 136 NLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDL 195
L L L L + ++ LP + L L+L+ NEL L AT Q L L L
Sbjct: 276 -LEALRELRLEGNRLNQLPLTLLEPLHSLEALDLSGNELSALHPATFGHQG--RLRELSL 332
Query: 196 SNCHLKGPLSEDAFVNATKLRTLYLSGN 223
+ L LS D F + L L L GN
Sbjct: 333 RDNALSA-LSGDIFAASPALYRLDLDGN 359
>sp|Q6R5N8|TLR13_MOUSE Toll-like receptor 13 OS=Mus musculus GN=Tlr13 PE=1 SV=1
Length = 991
Score = 80.9 bits (198), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 149/542 (27%), Positives = 241/542 (44%), Gaps = 44/542 (8%)
Query: 17 PGLITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPL 76
P L ++L N I ++ + SL +L + L ++N + L L L S N
Sbjct: 224 PCLERLDLTNNSIMYLDHSPRSLVSLTHLSFEGNKLRELNFSALS-LPNLTNLSASRNGN 282
Query: 77 RIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLK-SHIDWTLV-- 133
++I+ L L+ L L+ + + SA +L +L+ ++LS +L+ H+D V
Sbjct: 283 KVIQNVYLKTLPQLKSLNLSGTVIKLENLSA-KHLQNLRAMDLSNWELRHGHLDMKTVCH 341
Query: 134 -LGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAEN-ELIDLDVATTLGQNLVHLD 191
LGNL KL+TL +++ + A T L L+L +N +LI L+ + L L
Sbjct: 342 LLGNLPKLETLVFQKNVTNAEGIKQLAKCTRLLFLDLGQNSDLIYLNDSEF--NALPSLQ 399
Query: 192 SLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLS 251
L+L+ C L ++ + + L +L LS N + A PL L LSL ++
Sbjct: 400 KLNLNKCQLSF-INNRTWSSLQNLTSLDLSHNKFKSFP-DFAFSPLKHLEFLSLSRNPIT 457
Query: 252 RLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTS 311
L F L+EL+++ ++ + +LE LD+G +N++ ++ TF +
Sbjct: 458 ELNNLAFSGLFALKELNLAACWIVTIDRYSFTQFPNLEVLDLGDNNIRTLNHGTFRPLKK 517
Query: 312 LKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGN 371
L++LILS N L+ LE F LT+L L+L L+ FHE + + LE+L
Sbjct: 518 LQSLILSHNCLKILEPNSFSGLTNLRSLDLMYNSLS-----YFHE-HLFSGLEKLL---- 567
Query: 372 PLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILN-ETVFHENYTYPD--------LEEL 422
+L + + T T + F L L LN E H P L+EL
Sbjct: 568 ---ILKLGFNKITYETTRTLQYPPFIKLKSLKQLNLEGQRHGIQVVPSNFFQGLGSLQEL 624
Query: 423 RLSGNPLHVLPTGNLLPPQLSRLRSLDLSRCKID----YLPPNVFNNTRNITSLNLANNN 478
L NP L P L L LD+S K YL ++F N + + L L NNN
Sbjct: 625 LLGKNPSVFLDHHQFDP--LINLTKLDISGTKDGDRSLYLNASLFQNLKRLKILRLENNN 682
Query: 479 LSMTSELSFQFLDVLLELESLDLSNNNLTHISPTVLRHNRAITSIKLVGNPWKCDCNIAD 538
L L L L+ L NNL I+ + L++ +++ + GN +C C+ +
Sbjct: 683 LE---SLVPDMFSSLQSLQVFSLRFNNLKVINQSHLKNLKSLMFFDVYGNKLQCTCD--N 737
Query: 539 MW 540
+W
Sbjct: 738 LW 739
Score = 63.5 bits (153), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 96/369 (26%), Positives = 151/369 (40%), Gaps = 39/369 (10%)
Query: 25 NANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVF 84
N++ I + F SL L + +C LS IN + +++L L LDLS N + F
Sbjct: 381 NSDLIYLNDSEFNALPSLQKLNLNKCQLSFINNRTWSSLQNLTSLDLSHNKFKSFPDFAF 440
Query: 85 DPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLD 144
PL LE+L L+R +T ++ AF L LK L L+ + + ++ L+ LD
Sbjct: 441 SPLKHLEFLSLSRNPITELNNLAFSGLFALKELNLAACWIVTIDRYSFT--QFPNLEVLD 498
Query: 145 LRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPL 204
L + I L F L++L L+ N L L+ + G L +L SLDL L
Sbjct: 499 LGDNNIRTLNHGTFRPLKKLQSLILSHNCLKILEPNSFSG--LTNLRSLDLMYNSL-SYF 555
Query: 205 SEDAFVNATKLRTLYLSGNPLS-AADLSVALKPLTKLHRLSLRNC-----GLSRLPANTF 258
E F KL L L N ++ ++ P KL L N G+ +P+N F
Sbjct: 556 HEHLFSGLEKLLILKLGFNKITYETTRTLQYPPFIKLKSLKQLNLEGQRHGIQVVPSNFF 615
Query: 259 HRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMG---------------YSNLQRI-- 301
LQEL + NP + PL +L LD+ + NL+R+
Sbjct: 616 QGLGSLQELLLGKNPSVFLDHHQFDPLINLTKLDISGTKDGDRSLYLNASLFQNLKRLKI 675
Query: 302 -----------SRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLN 350
F + SL+ L N L+ + +NL L ++ L
Sbjct: 676 LRLENNNLESLVPDMFSSLQSLQVFSLRFNNLKVINQSHLKNLKSLMFFDVYGNKLQCTC 735
Query: 351 ETVFHENYT 359
+ ++ +N++
Sbjct: 736 DNLWFKNWS 744
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 136/510 (26%), Positives = 200/510 (39%), Gaps = 93/510 (18%)
Query: 57 PQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLML--NRCN--------------- 99
P FTNL+ L L L N + I+ G F L +L L L N+
Sbjct: 120 PWSFTNLSALVDLRLEWNSIWKIDEGAFRGLENLTLLNLVENKIQSVNNSFEGLSSLKTL 179
Query: 100 ------LTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNL 153
+T+I AF L LK L LS+N + + +L L+ LDL + I L
Sbjct: 180 LLSHNQITHIHKDAFTPLIKLKYLSLSRNNISDFSGILEAVQHLPCLERLDLTNNSIMYL 239
Query: 154 PDN----------VFANNTWLRNLNLAENELIDLD-----------VATTLGQNLVHLDS 192
+ F N LR LN + L +L + + L L S
Sbjct: 240 DHSPRSLVSLTHLSFEGNK-LRELNFSALSLPNLTNLSASRNGNKVIQNVYLKTLPQLKS 298
Query: 193 LDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVA-----LKPLTKLHRLSLRN 247
L+LS +K L + + LR + LS L L + L L KL L +
Sbjct: 299 LNLSGTVIK--LENLSAKHLQNLRAMDLSNWELRHGHLDMKTVCHLLGNLPKLETLVFQK 356
Query: 248 CGLSRLPANTFHRFTCLQELDISHNP-LIDAFTALLSPLESLEHLDMGYSNLQRISRSTF 306
+ + T L LD+ N LI + + L SL+ L++ L I+ T+
Sbjct: 357 NVTNAEGIKQLAKCTRLLFLDLGQNSDLIYLNDSEFNALPSLQKLNLNKCQLSFINNRTW 416
Query: 307 LKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEEL 366
+ +L +L LS NK ++ F L HL L L+ +T LN F + L+EL
Sbjct: 417 SSLQNLTSLDLSHNKFKSFPDFAFSPLKHLEFLSLSRNPITELNNLAFSGLFA---LKEL 473
Query: 367 RLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTYPDLEELRLSG 426
L+ + +YS TQ +P+LE L L
Sbjct: 474 NLAA----CWIVTIDRYSF----TQ------------------------FPNLEVLDLGD 501
Query: 427 NPLHVLPTGNLLPPQLSRLRSLDLSRCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELS 486
N + L G P L +L+SL LS + L PN F+ N+ SL+L N+LS E
Sbjct: 502 NNIRTLNHGTFRP--LKKLQSLILSHNCLKILEPNSFSGLTNLRSLDLMYNSLSYFHEHL 559
Query: 487 FQFLDVLLELESLDLSNNNLTHISPTVLRH 516
F L+ LL L+ L N +T+ + L++
Sbjct: 560 FSGLEKLLILK---LGFNKITYETTRTLQY 586
>sp|Q9NR97|TLR8_HUMAN Toll-like receptor 8 OS=Homo sapiens GN=TLR8 PE=1 SV=1
Length = 1041
Score = 80.9 bits (198), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 152/578 (26%), Positives = 243/578 (42%), Gaps = 90/578 (15%)
Query: 41 SLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRI-----------------IEPGV 83
SL L++ + I+ + F L L LDLSGN R I+
Sbjct: 223 SLRKLFLSNTQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFA 282
Query: 84 FDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTL 143
F LT L YL L+ +L I+ + F N+ HLK L+L N L I L L +L+ L
Sbjct: 283 FQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASGAFLTMLPRLEIL 342
Query: 144 DLRQSGI-SNLPDNV-----FANNTWLRNLNL---AENELIDLDVATTLGQNLVHLDSLD 194
DL + I + P ++ F+ LR L+L EL + D + L +L +++
Sbjct: 343 DLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLM--QLPNLSTIN 400
Query: 195 LSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSA----ADLSVALKPLTKLHRLSLRNCGL 250
L +K + F N + L +YLS N +S S A + H R+
Sbjct: 401 LGINFIK-QIDFKLFQNFSNLEIIYLSENRISPLVKDTRQSYANSSSFQRHIRKRRSTDF 459
Query: 251 SRLPANTFHRFT-------CL---QELDISHNPLIDAFTALLSPLESLEHLDMGY-SNLQ 299
P + F+ FT C + LD+S N + L + L++ SN Q
Sbjct: 460 EFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQ 519
Query: 300 RISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELN-NCGLTRLNETVFHENY 358
+S + F + +K L L+ N+L+ + L+ L VL+L+ N R+ H +
Sbjct: 520 VLSGTEFSAIPHVKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEF 579
Query: 359 T--YPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQ--------IWKNFDFLVILFILNET 408
+ +L+ L LS N ++ L D S + +W + D I +
Sbjct: 580 IQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNRYI------S 633
Query: 409 VFH--ENYTYPDLEELRLSGNP-------------LHVLPTGNLLP-------PQLSRLR 446
+F +N T DL RL P LH+ N+L Q RL
Sbjct: 634 IFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHI--NDNMLKFFNWTLLQQFPRLE 691
Query: 447 SLDLSRCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSFQFLDVLLELESLDLSNNNL 506
LDL K+ +L ++ + T ++ +L L++N + S L FL + L+ LDLS+N L
Sbjct: 692 LLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRI---SHLPSGFLSEVSSLKHLDLSSNLL 748
Query: 507 THISPTVL--RHNRAITSIKLVGNPWKCDCNIADMWEW 542
I+ + L + ++ ++L GNP++C C+I D W
Sbjct: 749 KTINKSALETKTTTKLSMLELHGNPFECTCDIGDFRRW 786
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 130/480 (27%), Positives = 197/480 (41%), Gaps = 91/480 (18%)
Query: 60 FTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLEL 119
F NL L +L L N L I G+ + LT L + N N+T S NL +L
Sbjct: 121 FLNLKNLRELLLEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNL----- 175
Query: 120 SQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDV 179
++ W + + +N+ D VF T L+ + V
Sbjct: 176 -------YLAWNCYFNKVCE----------KTNIEDGVFE--TLTNLELLSLSFNSLSHV 216
Query: 180 ATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGN-------PL------S 226
L + L L LSN +K +SE+ F L L LSGN P
Sbjct: 217 PPKLPSS---LRKLFLSNTQIKY-ISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDG 272
Query: 227 AADLSV---ALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLID--AFTAL 281
A +++ A + LT+L L+L + L ++ A F L+ LD+ N L+ A A
Sbjct: 273 GASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASGAF 332
Query: 282 LSPLESLEHLDMGYSNLQ-------RISRSTFLKMTSLKTLILSGNKLETLESGLFQNLT 334
L+ L LE LD+ ++ ++ ISR+ F K+ SL+ L L G + L FQ L
Sbjct: 333 LTMLPRLEILDLSFNYIKGSYPQHINISRN-FSKLLSLRALHLRGYVFQELREDDFQPLM 391
Query: 335 HLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQ-YS-----MRTI 388
L L N G+ + + F + +LE + LS N + L T+Q Y+ R I
Sbjct: 392 QLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRISPLVKDTRQSYANSSSFQRHI 451
Query: 389 PTQIWKNFDFLVILFILNETVFHENYTYPDLEELRLSGNPLHVLPTGNLLPPQLSRL-RS 447
+ +F+F H N+ + T L+ PQ + ++
Sbjct: 452 RKRRSTDFEFDP----------HSNFYH----------------FTRPLIKPQCAAYGKA 485
Query: 448 LDLSRCKIDYLPPNVFNNTRNITSLNL-ANNNLSMTSELSFQFLDVLLELESLDLSNNNL 506
LDLS I ++ PN F N +I LNL AN+N + S F + ++ LDL+NN L
Sbjct: 486 LDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFS---AIPHVKYLDLTNNRL 542
Score = 38.1 bits (87), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 81/188 (43%), Gaps = 2/188 (1%)
Query: 12 RNLDNPGLITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDL 71
+ L N + ++LN P E + SL L++ + L N L LDL
Sbjct: 636 KGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDL 695
Query: 72 SGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWT 131
GN L + + D +SL L+L+ ++++ ++ LK L+LS N LK+
Sbjct: 696 RGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSGFLSEVSSLKHLDLSSNLLKTINKSA 755
Query: 132 LVLGNLGKLDTLDLRQSGISNLPDNVFANNTWL-RNLNLAENELIDLDVATTLGQNLVHL 190
L KL L+L + D + W+ +LN+ L+D+ A+ Q +
Sbjct: 756 LETKTTTKLSMLELHGNPFECTCD-IGDFRRWMDEHLNVKIPRLVDVICASPGDQRGKSI 814
Query: 191 DSLDLSNC 198
SL+L+ C
Sbjct: 815 VSLELTTC 822
>sp|A4IIW9|LIGO1_XENTR Leucine-rich repeat and immunoglobulin-like domain-containing nogo
receptor-interacting protein 1 OS=Xenopus tropicalis
GN=lingo1 PE=2 SV=1
Length = 606
Score = 80.5 bits (197), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 142/329 (43%), Gaps = 57/329 (17%)
Query: 69 LDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHI 128
LDLS N ++ + F LE L LN ++ I P AF+ L +L++L L N+LK +
Sbjct: 62 LDLSKNRIKALNQDEFSAFPYLEELELNENIVSIIEPGAFNGLFNLRSLGLRSNRLK--L 119
Query: 129 DWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLV 188
V L L LD+ ++ I L D++F + L++L + +N+L+ + G N
Sbjct: 120 IPLGVFTGLSNLTQLDISENKIVILLDDMFQDLYNLKSLEVGDNDLVYISHRAFRGLN-- 177
Query: 189 HLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNC 248
L+ L L C+L +E AL L L L LR
Sbjct: 178 SLEELTLEKCNLTSVPTE--------------------------ALSHLHGLITLKLRYL 211
Query: 249 GLSRLPANTFHRFTCLQELDISHNPLIDAFTA------------------------LLSP 284
++ + +F R L+ L+I+H P +D T+ +
Sbjct: 212 NINVIRDYSFKRLYRLKNLEIAHWPYLDTMTSNGLYGLNLTSLSITHSNLSSIPYVAIRH 271
Query: 285 LESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNC 344
L L L++ Y+ + + S ++ L+ L G +L +E F+ L HL VL +++
Sbjct: 272 LVYLRFLNLSYNPITAVEGSMLYELLRLQEFHLVGGQLSVVEPYAFRGLNHLKVLNVSSN 331
Query: 345 GLTRLNETVFHENYTYPDLEELRLSGNPL 373
L+ L E+ FH + +LE L L NPL
Sbjct: 332 YLSTLEESSFH---SVGNLETLILDKNPL 357
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 96/307 (31%), Positives = 141/307 (45%), Gaps = 31/307 (10%)
Query: 17 PGLITINLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNP 75
P L + LN N + +E GAF +L L ++ L I FT L+ L +LD+S N
Sbjct: 81 PYLEELELNENIVSIIEPGAFNGLFNLRSLGLRSNRLKLIPLGVFTGLSNLTQLDISENK 140
Query: 76 LRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLG 135
+ I+ +F L +L+ L + +L YIS AF LN L+ L L + L S T L
Sbjct: 141 IVILLDDMFQDLYNLKSLEVGDNDLVYISHRAFRGLNSLEELTLEKCNLTSVP--TEALS 198
Query: 136 NLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDL 195
+L L TL LR I+ + D F L+NL +A LD T+ G ++L SL +
Sbjct: 199 HLHGLITLKLRYLNINVIRDYSFKRLYRLKNLEIAHWPY--LDTMTSNGLYGLNLTSLSI 256
Query: 196 SNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPA 255
++ +L + A + LR L LS NP++A + S+ L L +L L LS +
Sbjct: 257 THSNLSS-IPYVAIRHLVYLRFLNLSYNPITAVEGSM-LYELLRLQEFHLVGGQLSVVEP 314
Query: 256 NTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTL 315
F L+ L++S N LS LE S+F + +L+TL
Sbjct: 315 YAFRGLNHLKVLNVSSN--------YLSTLE----------------ESSFHSVGNLETL 350
Query: 316 ILSGNKL 322
IL N L
Sbjct: 351 ILDKNPL 357
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 101/437 (23%), Positives = 172/437 (39%), Gaps = 60/437 (13%)
Query: 193 LDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSR 252
LDLS +K L++D F L L L+ N +S + A L L L LR+ L
Sbjct: 62 LDLSKNRIKA-LNQDEFSAFPYLEELELNENIVSIIEPG-AFNGLFNLRSLGLRSNRLKL 119
Query: 253 LPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSL 312
+P F + L +LDIS N ++ + L +L+ L++G ++L IS F + SL
Sbjct: 120 IPLGVFTGLSNLTQLDISENKIVILLDDMFQDLYNLKSLEVGDNDLVYISHRAFRGLNSL 179
Query: 313 KTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELR----- 367
+ L L L ++ + +L L L+L + + + F Y +LE
Sbjct: 180 EELTLEKCNLTSVPTEALSHLHGLITLKLRYLNINVIRDYSFKRLYRLKNLEIAHWPYLD 239
Query: 368 -LSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTYPDLEELRLSG 426
++ N L+ L ++ + + + + LV L LN LS
Sbjct: 240 TMTSNGLYGLNLTSLSITHSNLSSIPYVAIRHLVYLRFLN-----------------LSY 282
Query: 427 NPLHVLPTGNLLPPQLSRLRSLDLSRCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELS 486
NP+ + G++L +L RL+ L ++ + P F ++ LN+++N LS E S
Sbjct: 283 NPITAV-EGSMLY-ELLRLQEFHLVGGQLSVVEPYAFRGLNHLKVLNVSSNYLSTLEESS 340
Query: 487 FQFLDVLLELESLDLSNNNLTHISPTVLRHNRAITSIKLVGNPWKCDCNIADMWEWATRE 546
F + LE+L L N P CDC + +W + R
Sbjct: 341 FHSVG---NLETLILDKN------------------------PLACDCRL--LWIFRRRW 371
Query: 547 KGDIGVLVGSTTPTEIGFGASRKKKGLVC---YFDIFTTPTRKRPGRELFASTNKTWARY 603
+ + S + E G K V YF + + ++ T +
Sbjct: 372 RLNFSRQQPSCSSPEYVQGKEFKDFPDVLQPNYFTCRRARIQDHSAQVVYVDEGHTVHFF 431
Query: 604 VK-EADCPSSKLFRPPR 619
+ + D P + L++ PR
Sbjct: 432 CRADGDPPPTILWQSPR 448
Score = 34.7 bits (78), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 105/241 (43%), Gaps = 34/241 (14%)
Query: 310 TSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLS 369
T + L LS N+++ L F +L LELN ++ + F+ + +L L L
Sbjct: 57 TDTRLLDLSKNRIKALNQDEFSAFPYLEELELNENIVSIIEPGAFNGLF---NLRSLGLR 113
Query: 370 GNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTYPDLEELRLSGNPL 429
N L ++P ++ + TQ+ + + +VIL + +F + Y +L+ L + N L
Sbjct: 114 SNRLKLIPLGV--FTGLSNLTQLDISENKIVILL---DDMFQDLY---NLKSLEVGDNDL 165
Query: 430 HVLPTGNLLPPQLSRLRSLDLSRCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSFQ- 488
+ L+ L L L +C + +P ++ + +L L N+++ + SF+
Sbjct: 166 VYISHRAFR--GLNSLEELTLEKCNLTSVPTEALSHLHGLITLKLRYLNINVIRDYSFKR 223
Query: 489 -------------FLDVL-------LELESLDLSNNNLTHISPTVLRHNRAITSIKLVGN 528
+LD + L L SL ++++NL+ I +RH + + L N
Sbjct: 224 LYRLKNLEIAHWPYLDTMTSNGLYGLNLTSLSITHSNLSSIPYVAIRHLVYLRFLNLSYN 283
Query: 529 P 529
P
Sbjct: 284 P 284
>sp|O60602|TLR5_HUMAN Toll-like receptor 5 OS=Homo sapiens GN=TLR5 PE=1 SV=4
Length = 858
Score = 80.5 bits (197), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 132/538 (24%), Positives = 226/538 (42%), Gaps = 80/538 (14%)
Query: 55 INPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLT--YISPSAFDNLN 112
I+ + F NL L LDL + + + P F L L L L C L+ + F NL
Sbjct: 86 IDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLK 145
Query: 113 HLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFA--NNTWLRNLNLA 170
L L+LS+N+++S + G L L ++D + I + ++ L +LA
Sbjct: 146 ALTRLDLSKNQIRS-LYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLA 204
Query: 171 ENEL---IDLDVATTLG--QNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPL 225
N L + +D + +N+V L+ LD+S T+ ++GN
Sbjct: 205 ANSLYSRVSVDWGKCMNPFRNMV-LEILDVSG----------------NGWTVDITGNFS 247
Query: 226 SAADLSVALKPLTKLHRLSLRNCGLSRLP---ANTFHRF--TCLQELDISHNPLIDAFTA 280
+A S A L H + G + NTF + ++ LD+SH + +
Sbjct: 248 NAISKSQAFS-LILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSR 306
Query: 281 LLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLE 340
+ L+ L+ L++ Y+ + +I+ F + +L+ L LS N L L S F L ++ ++
Sbjct: 307 VFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYID 366
Query: 341 LNNCGLTRLNETVF-----------HEN-----YTYPDLEELRLSGNPLHVLPDSTKQYS 384
L + + + F +N + P + ++ LSGN L LP +
Sbjct: 367 LQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIHFIPSIPDIFLSGNKLVTLPKINLTAN 426
Query: 385 MRTIPTQIWKNFDFLVIL--------FILNETVF---------HENYTYPDLEELRLSGN 427
+ + +N D L L ILN+ F EN P LE+L L N
Sbjct: 427 LIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSEN---PSLEQLFLGEN 483
Query: 428 PLHVLPTGNL---LPPQLSRLRSLDLSRCKIDYLPPNVFNNTRNITSLNLANNNLSMTSE 484
L + L + LS L+ L L+ ++ LPP VF++ + L+L +N L++ S
Sbjct: 484 MLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSH 543
Query: 485 LSFQFLDVLLELESLDLSNNNLTHISPTVLRHNRAITSIKLVGNPWKCDCNIADMWEW 542
D+ LE LD+S N L +P V +++ + + N + C+C ++ W
Sbjct: 544 -----NDLPANLEILDISRNQLLAPNPDVF---VSLSVLDITHNKFICECELSTFINW 593
>sp|Q9MYW3|TLR4_HORSE Toll-like receptor 4 OS=Equus caballus GN=TLR4 PE=2 SV=1
Length = 843
Score = 80.1 bits (196), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 144/570 (25%), Positives = 233/570 (40%), Gaps = 110/570 (19%)
Query: 64 TTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNK 123
T+ +LDLS NPL+ + F L+ L L+RC + I A+ LNHL TL L+ N
Sbjct: 54 TSTKELDLSFNPLKELGSHSFSNFPELQVLDLSRCEIEMIEDDAYQGLNHLSTLILTGNP 113
Query: 124 LKSHIDWTLVLG---NLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVA 180
++S L LG L L TL ++ +S+L + L+ LN+A N + +
Sbjct: 114 IRS-----LALGAFSGLSSLQTLVAVETKLSSLEKFPIGHLKTLKELNVAHNLIHSFKLP 168
Query: 181 TTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPL--- 237
+ + +L+ LDLSN ++ ED LR L+ PL L ++L PL
Sbjct: 169 EYFSK-MPNLEHLDLSNNKIQNISHED-------LRVLH--QMPLLNLSLDLSLNPLEFI 218
Query: 238 -------TKLHRLSLRN----------C--GLSRLPAN-----TFHRFTCLQELDIS--- 270
KLH+L+LR+ C GL+ L N F L+ D S
Sbjct: 219 QPDAFKEIKLHKLTLRSNFDSIDVMKSCIQGLAGLKVNRLVLGEFKNERKLERFDTSALR 278
Query: 271 --HNPLIDAFT-ALLSPLESLEHLDM---------------------------GYSNLQ- 299
HN I+ F A + S + +D+ G+ + +
Sbjct: 279 GLHNLTIEEFRLAYIDNYSSKDSIDLLNCLADISKISLVSLDLGNLKDFPKGFGWQDFEL 338
Query: 300 ---RISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNN--------CGLTR 348
RI L++TSLK L+ + NK ++S L L L+L+ C
Sbjct: 339 VNCRIEGFPTLELTSLKRLVFTSNK--DMKSFNEVKLPSLEFLDLSRNRLSFKSCCSEAD 396
Query: 349 LNETVF-HENYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQI-----WKNFDFLVIL 402
L T H + ++ D+ + + L L Q+S + KN +L I
Sbjct: 397 LKTTRLKHLDLSFNDVISMSSNFMGLEQLEHLDFQHSTLKQASDFPVFLSLKNLRYLDIS 456
Query: 403 FILNETVFHENYT-YPDLEELRLSGNPLHVLPTGNLLP---PQLSRLRSLDLSRCKIDYL 458
+ VFH + L+ L+++GN N LP +++ L +LDLS+C ++ +
Sbjct: 457 YTNTRVVFHGIFDGLVSLQVLKMAGNSF----KDNFLPNIFREMTNLTTLDLSKCNLEQV 512
Query: 459 PPNVFNNTRNITSLNLANNNLSMTSELSFQFLDVLLELESLDLSNNNLTHISPTVLRH-N 517
F + LN+++NNL L ++ L L+ LD S N + L+H
Sbjct: 513 SQEAFCLLPRLRVLNMSHNNLLFLDMLPYKPLH---SLQILDCSFNRIVAFKWQELQHFP 569
Query: 518 RAITSIKLVGNPWKCDCNIADMWEWATREK 547
++ S+ L N + C C +W ++
Sbjct: 570 SSLASLNLTQNDFACVCEYQSFLQWVKDQR 599
Score = 41.6 bits (96), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 62/133 (46%), Gaps = 2/133 (1%)
Query: 22 INLNANPIQPVEG-AFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIE 80
++L+ NP++ + +F L L + C + I + L L+ L L+GNP+R +
Sbjct: 59 LDLSFNPLKELGSHSFSNFPELQVLDLSRCEIEMIEDDAYQGLNHLSTLILTGNPIRSLA 118
Query: 81 PGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKL 140
G F L+SL+ L+ L+ + +L LK L ++ N + S + L
Sbjct: 119 LGAFSGLSSLQTLVAVETKLSSLEKFPIGHLKTLKELNVAHNLIHS-FKLPEYFSKMPNL 177
Query: 141 DTLDLRQSGISNL 153
+ LDL + I N+
Sbjct: 178 EHLDLSNNKIQNI 190
Score = 39.3 bits (90), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 58/138 (42%), Gaps = 26/138 (18%)
Query: 13 NLDNPGLITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINP-QFFTNLTTLNKLDL 71
+L L ++L+ N + + F+ L +L Q TL + + F +L L LD+
Sbjct: 396 DLKTTRLKHLDLSFNDVISMSSNFMGLEQLEHLDFQHSTLKQASDFPVFLSLKNLRYLDI 455
Query: 72 SGNPLRIIEPGVFDPLTSLEYLM-------------------------LNRCNLTYISPS 106
S R++ G+FD L SL+ L L++CNL +S
Sbjct: 456 SYTNTRVVFHGIFDGLVSLQVLKMAGNSFKDNFLPNIFREMTNLTTLDLSKCNLEQVSQE 515
Query: 107 AFDNLNHLKTLELSQNKL 124
AF L L+ L +S N L
Sbjct: 516 AFCLLPRLRVLNMSHNNL 533
>sp|O75093|SLIT1_HUMAN Slit homolog 1 protein OS=Homo sapiens GN=SLIT1 PE=2 SV=4
Length = 1534
Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 147/614 (23%), Positives = 230/614 (37%), Gaps = 114/614 (18%)
Query: 19 LITINLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLR 77
+ I L N I+ + GAF R L + + +++I P F L +LN L L GN +
Sbjct: 311 MTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKIT 370
Query: 78 IIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNL 137
+ GVF L +L+ L+LN + I P AF +L +L L L NK++S T +L
Sbjct: 371 DLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFT--SL 428
Query: 138 GKLDTLDLRQ-----------------------SGI----------------------SN 152
+ TL L Q SG +
Sbjct: 429 RAIQTLHLAQNPFICDCNLKWLADFLRTNPIETSGARCASPRRLANKRIGQIKSKKFRCS 488
Query: 153 LPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNA 212
+ F T LN N + N+V SL L+ + E +
Sbjct: 489 AKEQYFIPGTEDYQLNSECNSDVVCPHKCRCEANVVECSSLKLTK------IPERIPQST 542
Query: 213 TKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHN 272
+LR L+ N +S + + K LT L +++L N +S + F + EL ++ N
Sbjct: 543 AELR---LNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTAN 599
Query: 273 PLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQN 332
L + + L+ L L + + + I +F + +++ L L N++ T+ G F
Sbjct: 600 QLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQITTVSPGAFDT 659
Query: 333 LTHLSVLEL------NNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQYSMR 386
L LS L L NC L L + ++GNP PD +R
Sbjct: 660 LQSLSTLNLLANPFNCNCQLAWLGGWLRKRKI---------VTGNPRCQNPD-----FLR 705
Query: 387 TIPTQIWKNFDFLVILFILNETVFHENYTYPDLE----------ELRLSGNPLHVLPTG- 435
IP Q DF E E P + +R S L LP G
Sbjct: 706 QIPLQDVAFPDFRC------EEGQEEGGCLPRPQCPQECACLDTVVRCSNKHLRALPKGI 759
Query: 436 --------------NLLPPQLSRLRSL---DLSRCKIDYLPPNVFNNTRNITSLNLANNN 478
L+P QLS + L DLS KI L + F N +T+L L+ N
Sbjct: 760 PKNVTELYLDGNQFTLVPGQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNA 819
Query: 479 LSMTSELSFQFLDVLLELESLDLSNNNLTHISPTVLRHNRAITSIKLVGNPWKCDCNIAD 538
L L+FQ L L L N+++ + + +++ + + NP CDC++
Sbjct: 820 LQCIPPLAFQGLRSLRLLSL---HGNDISTLQEGIFADVTSLSHLAIGANPLYCDCHLRW 876
Query: 539 MWEWATREKGDIGV 552
+ W + G+
Sbjct: 877 LSSWVKTGYKEPGI 890
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 116/504 (23%), Positives = 197/504 (39%), Gaps = 52/504 (10%)
Query: 40 RSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCN 99
++L L + E + I + F T L L L N + IE G F L LE L LN N
Sbjct: 133 QALSRLDLSENAIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNN 192
Query: 100 LTYISPSAFDNLNHLKTLELSQNKL--KSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNV 157
+T I S+F+++ L+T L N L H+ W + LRQ L
Sbjct: 193 ITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWL----------SQWLRQRPTIGLFTQC 242
Query: 158 FANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRT 217
+ LR LN+AE + + + V +L +C P R
Sbjct: 243 -SGPASLRGLNVAEVQKSEFSCSGQGEAGRVPTCTLSSGSC----PAMCTCSNGIVDCRG 297
Query: 218 LYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDA 277
L+ P A+L + + RL L G+ +P F + L+ +D+S+N + +
Sbjct: 298 KGLTAIP---ANLPETMTEI----RLELN--GIKSIPPGAFSPYRKLRRIDLSNNQIAEI 348
Query: 278 FTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLS 337
L SL L + + + + R F + +L+ L+L+ NK+ + FQ+L +LS
Sbjct: 349 APDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLS 408
Query: 338 VLELNNCGLTRLNETVFHENYTYPDLEELRLSGNP------LHVLPD-----STKQYSMR 386
+L L + + L + F + ++ L L+ NP L L D + R
Sbjct: 409 LLSLYDNKIQSLAKGTF---TSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETSGAR 465
Query: 387 TIPTQIWKNFDFLVILFILNETVFHENYTYPDLEELRLSGNPLHVLPTGNLLPPQLSRLR 446
+ N I E Y P E+ +L+ +++ P R
Sbjct: 466 CASPRRLANKRIGQIKSKKFRCSAKEQYFIPGTEDYQLNSE-----CNSDVVCPHKCRCE 520
Query: 447 S--LDLSRCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSFQFLDVLLELESLDLSNN 504
+ ++ S K+ +P + +T L L NN +S+ L L+ ++LSNN
Sbjct: 521 ANVVECSSLKLTKIPERIPQST---AELRLNNNEISILEATG--MFKKLTHLKKINLSNN 575
Query: 505 NLTHISPTVLRHNRAITSIKLVGN 528
++ I +++ + L N
Sbjct: 576 KVSEIEDGAFEGAASVSELHLTAN 599
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 87/182 (47%), Gaps = 16/182 (8%)
Query: 390 TQIWKNFDFL------VILFILNETVFHENYTYPD---LEELRLSGNPLHVLPTGNLLPP 440
T+I KN DF V+ + N+ E + D LE LRL+ N LH+LP LL
Sbjct: 74 TRIHKN-DFAGLKQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLHMLP--ELLFQ 130
Query: 441 QLSRLRSLDLSRCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSFQFLDVLLELESLD 500
L LDLS I +P F ++ +L L N +S E +F+ L LE L
Sbjct: 131 NNQALSRLDLSENAIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAFR---ALRGLEVLT 187
Query: 501 LSNNNLTHISPTVLRHNRAITSIKLVGNPWKCDCNIADMWEWATREKGDIGVLVGSTTPT 560
L+NNN+T I + H + + +L N CDC++A + +W R++ IG+ + P
Sbjct: 188 LNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQW-LRQRPTIGLFTQCSGPA 246
Query: 561 EI 562
+
Sbjct: 247 SL 248
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 131/335 (39%), Gaps = 53/335 (15%)
Query: 204 LSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTC 263
+ ++ F +LR L L N + A + A + +L RL RL N H
Sbjct: 76 IHKNDFAGLKQLRVLQLMENQIGAVERG-AFDDMKELERL--------RLNRNQLHM--- 123
Query: 264 LQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLE 323
L EL +N ++L LD+ + +Q I R F T LK L L N++
Sbjct: 124 LPELLFQNN-------------QALSRLDLSENAIQAIPRKAFRGATDLKNLQLDKNQIS 170
Query: 324 TLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQY 383
+E G F+ L L VL LNN +T + + F+ P L RL N H+ D +
Sbjct: 171 CIEEGAFRALRGLEVLTLNNNNITTIPVSSFNH---MPKLRTFRLHSN--HLFCDCHLAW 225
Query: 384 ---SMRTIPT-QIWKNFDFLVILFILNETVFHENYTYPDLEELRLSGN------PLHVLP 433
+R PT ++ L LN ++ E SG P L
Sbjct: 226 LSQWLRQRPTIGLFTQCSGPASLRGLNVAEVQKS-------EFSCSGQGEAGRVPTCTLS 278
Query: 434 TGNLLPPQLSRLRSLDLSRCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSFQFLDVL 493
+G+ P + S + C+ L N +T + L N + +F
Sbjct: 279 SGSC--PAMCTC-SNGIVDCRGKGLTAIPANLPETMTEIRLELNGIKSIPPGAF---SPY 332
Query: 494 LELESLDLSNNNLTHISPTVLRHNRAITSIKLVGN 528
+L +DLSNN + I+P + R++ S+ L GN
Sbjct: 333 RKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGN 367
Score = 32.7 bits (73), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 58/132 (43%), Gaps = 6/132 (4%)
Query: 249 GLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLK 308
GL +P N R T + L+++ N + + L+ L L + + + + R F
Sbjct: 51 GLQAIPKN-IPRNT--ERLELNGNNITRIHKNDFAGLKQLRVLQLMENQIGAVERGAFDD 107
Query: 309 MTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRL 368
M L+ L L+ N+L L LFQN LS L+L+ + + F DL+ L+L
Sbjct: 108 MKELERLRLNRNQLHMLPELLFQNNQALSRLDLSENAIQAIPRKAFR---GATDLKNLQL 164
Query: 369 SGNPLHVLPDST 380
N + + +
Sbjct: 165 DKNQISCIEEGA 176
>sp|Q6P3Y9|PONL1_MOUSE Podocan-like protein 1 OS=Mus musculus GN=Podnl1 PE=2 SV=2
Length = 568
Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 147/528 (27%), Positives = 216/528 (40%), Gaps = 89/528 (16%)
Query: 8 YNDRRNLDNPGLITINLNANPIQPVEG----AFLVARSLLYLYMQECTLSKINPQFFTNL 63
YN+ L GL T++L++N I EG AF L Y+ LS + PQF
Sbjct: 84 YNELSRLS--GLRTLDLHSNLIT-SEGLPDEAFESLNQLENFYVAHNKLS-VAPQFLPR- 138
Query: 64 TTLNKLDLSGNPLRIIEPGVFDPLTSLE--YLMLNRCNLTYISPSAFDNLNHLKTLELSQ 121
+L DL+ N + I P F +L YL NR T + P+ F + TL LS
Sbjct: 139 -SLRVADLAANEVVEIFPLTFGEKPALRSVYLHNNRLRNTGLPPNTFHGSEVITTLSLSS 197
Query: 122 NKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVAT 181
N+L S++ +L L+ L L+ + IS +P + T LR L L N+L D +
Sbjct: 198 NQL-SYLPPSLP----ASLERLHLQNNLISKVPRGALSLQTHLRELYLQHNQLTDSGLDA 252
Query: 182 TLGQNLVHLDSLDLSNCHLK-------GPLS-------------EDAFVNATKLRTLYLS 221
T L L+ LDLS+ L G L+ A LR L L
Sbjct: 253 TTFSKLSSLEYLDLSHNQLATVPEGLPGTLTILHLGRNCIRHVEAVRLHKARGLRYLLLQ 312
Query: 222 GNPLSAADLSVA-LKPLTKLHRLSLRNCGLSRL-PANTFHRFTCLQELDISHNPLIDAFT 279
N L A+ L L+PL LH L L L R+ PA H LQ L + HN +
Sbjct: 313 HNKLGASALPKGTLRPLRALHTLHLYGNKLERVPPALPRH----LQALVMPHNHVAALGA 368
Query: 280 ALLSPLESLEHLDMGYSNL--QRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLS 337
L +L L++ Y++L + S F ++ +L++L L+GN+L L GL +L L
Sbjct: 369 RDLVSARALAELNLAYNSLASAHVHPSAFRRLRALRSLDLAGNQLTRLPEGLPASLRSL- 427
Query: 338 VLELNNCGLTRLNETVFHENYTYPDLEELRLSG-NPLHVLPDSTKQYSMRTIPTQIWKNF 396
RL LE +L+G N L L + + + I W
Sbjct: 428 ----------RLQRNQLR------TLEPEQLAGLNKLRELNLAHNRLRVGDIGPGTWHEL 471
Query: 397 DFLVILFILNETVFHENYTYPDLEELRLSGNPLHVLPTGNLLPPQLSRLRSLDLSRCKID 456
L +L + + + ++ PDL E L L L +I
Sbjct: 472 QALKVLDLSHNEL---SFVPPDLPEA----------------------LEELYLQANRIS 506
Query: 457 YLPPNVFNNTRNITSLNLANNNLSMTSELSFQFLDVLLELESLDLSNN 504
++ P F +T ++ +L L N L MTS + + L L L +D + N
Sbjct: 507 HVGPEAFLSTPHLRALFLRANRLHMTS-IRAEALQGLTHLRVVDTAEN 553
Score = 60.8 bits (146), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 123/481 (25%), Positives = 192/481 (39%), Gaps = 63/481 (13%)
Query: 38 VARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNR 97
+ R+ +L +Q L ++ + L+ L LDL N I G+ D
Sbjct: 65 ITRAARHLSLQNNQLRELPYNELSRLSGLRTLDLHSN--LITSEGLPD------------ 110
Query: 98 CNLTYISPSAFDNLNHLKTLELSQNKLK---SHIDWTLVLGNLGKLDTLDLRQSGISNLP 154
AF++LN L+ ++ NKL + +L + +L + +++ P
Sbjct: 111 --------EAFESLNQLENFYVAHNKLSVAPQFLPRSLRVADLAANEVVEIFPLTFGEKP 162
Query: 155 D--NVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNA 212
+V+ +N LRN L N +V TTL L S LS P S A +
Sbjct: 163 ALRSVYLHNNRLRNTGLPPNTFHGSEVITTLS-----LSSNQLSYL----PPSLPASLER 213
Query: 213 TKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHN 272
L+ +S P A L L+ L H L + GL A TF + + L+ LD+SHN
Sbjct: 214 LHLQNNLISKVPRGALSLQTHLRELYLQHN-QLTDSGLD---ATTFSKLSSLEYLDLSHN 269
Query: 273 PLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKL--ETLESGLF 330
L L +L L +G + ++ + K L+ L+L NKL L G
Sbjct: 270 QLATVPEGLPG---TLTILHLGRNCIRHVEAVRLHKARGLRYLLLQHNKLGASALPKGTL 326
Query: 331 QNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPT 390
+ L L L L L R+ + L+ L + N HV +
Sbjct: 327 RPLRALHTLHLYGNKLERVPPALPRH------LQALVMPHN--HVAALGARDLVSARALA 378
Query: 391 QIWKNFDFLVILFILNETVFHENYTYPDLEELRLSGNPLHVLPTGNLLPPQLSRLRSLDL 450
++ ++ L + + + F L L L+GN L LP G LP + LRSL L
Sbjct: 379 ELNLAYNSLASAHV-HPSAFRRLRA---LRSLDLAGNQLTRLPEG--LP---ASLRSLRL 429
Query: 451 SRCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSFQFLDVLLELESLDLSNNNLTHIS 510
R ++ L P + LNLA+N L + ++ L L+ LDLS+N L+ +
Sbjct: 430 QRNQLRTLEPEQLAGLNKLRELNLAHNRLRV-GDIGPGTWHELQALKVLDLSHNELSFVP 488
Query: 511 P 511
P
Sbjct: 489 P 489
Score = 53.5 bits (127), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 115/422 (27%), Positives = 172/422 (40%), Gaps = 93/422 (22%)
Query: 141 DTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDL-SNCH 199
DT+D + PDN+ R+L+L N+L +L L L +LDL SN
Sbjct: 49 DTVDCAGLDLRIFPDNI---TRAARHLSLQNNQLRELPYNEL--SRLSGLRTLDLHSNLI 103
Query: 200 LKGPLSEDAFVNATKLRTLYLSGNPLS---------------AADLSVALKPLT------ 238
L ++AF + +L Y++ N LS AA+ V + PLT
Sbjct: 104 TSEGLPDEAFESLNQLENFYVAHNKLSVAPQFLPRSLRVADLAANEVVEIFPLTFGEKPA 163
Query: 239 ----KLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMG 294
LH LRN GL P NTFH + L +S N L +L + SLE L +
Sbjct: 164 LRSVYLHNNRLRNTGL---PPNTFHGSEVITTLSLSSNQLSYLPPSLPA---SLERLHLQ 217
Query: 295 YSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVF 354
+ + ++ R T L+ L L N+L +SGL + T F
Sbjct: 218 NNLISKVPRGALSLQTHLRELYLQHNQLT--DSGL--------------------DATTF 255
Query: 355 HENYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHEN- 413
+ LE L LS N L +P+ +P L IL + + H
Sbjct: 256 SK---LSSLEYLDLSHNQLATVPEG--------LP-------GTLTILHLGRNCIRHVEA 297
Query: 414 ---YTYPDLEELRLSGNPL--HVLPTGNLLPPQLSRLRSLDLSRCKIDYLPPNVFNNTRN 468
+ L L L N L LP G L P L L +L L K++ +PP + R+
Sbjct: 298 VRLHKARGLRYLLLQHNKLGASALPKGTLRP--LRALHTLHLYGNKLERVPPAL---PRH 352
Query: 469 ITSLNLANNNLSMTSELSFQFLDVLLELESLDLSNNNLT--HISPTVLRHNRAITSIKLV 526
+ +L + +N+++ L + L L L+L+ N+L H+ P+ R RA+ S+ L
Sbjct: 353 LQALVMPHNHVAA---LGARDLVSARALAELNLAYNSLASAHVHPSAFRRLRALRSLDLA 409
Query: 527 GN 528
GN
Sbjct: 410 GN 411
>sp|Q9N008|LIGO1_MACFA Leucine-rich repeat and immunoglobulin-like domain-containing nogo
receptor-interacting protein 1 OS=Macaca fascicularis
GN=LINGO1 PE=2 SV=1
Length = 614
Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 135/298 (45%), Gaps = 28/298 (9%)
Query: 69 LDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHI 128
LDL N ++ + F LE L LN ++ + P AF+NL +L+TL L N+LK +
Sbjct: 70 LDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLK--L 127
Query: 129 DWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLV 188
V L L LD+ ++ I L D +F + L++L + +N+L+ + G N
Sbjct: 128 IPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLN-- 185
Query: 189 HLDSLDLSNC-----------HLKG------------PLSEDAFVNATKLRTLYLSGNPL 225
L+ L L C HL G + + +F +L+ L +S P
Sbjct: 186 SLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPY 245
Query: 226 SAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPL 285
L L L LS+ +C L+ +P L+ L++S+NP+ ++L L
Sbjct: 246 LDTMTPNCLYGLN-LTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHEL 304
Query: 286 ESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNN 343
L+ + + L + F + L+ L +SGN+L TLE +F ++ +L L L++
Sbjct: 305 LRLQEIQLVGGQLAMVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDS 362
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 129/277 (46%), Gaps = 9/277 (3%)
Query: 17 PGLITINLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNP 75
P L + LN N + VE GAF +L L ++ L I FT L+ L KLD+S N
Sbjct: 89 PHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENK 148
Query: 76 LRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLG 135
+ I+ +F L +L+ L + +L YIS AF LN L+ L L + L S T L
Sbjct: 149 IVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIP--TEALS 206
Query: 136 NLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTL-GQNLVHLDSLD 194
+L L L LR I+ + D F L+ L ++ +D L G NL SL
Sbjct: 207 HLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLT---SLS 263
Query: 195 LSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLP 254
+++C+L + A + LR L LS NP+S + S+ L L +L + L L+ +
Sbjct: 264 ITHCNLTA-VPYLAVRHLVYLRFLNLSYNPISTIEGSM-LHELLRLQEIQLVGGQLAMVE 321
Query: 255 ANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHL 291
F L+ L++S N L ++ + +LE L
Sbjct: 322 PYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETL 358
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 88/398 (22%), Positives = 161/398 (40%), Gaps = 54/398 (13%)
Query: 256 NTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTL 315
+ F F L+EL+++ N + + L +L L + + L+ I F +++L L
Sbjct: 83 DEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKL 142
Query: 316 ILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHV 375
+S NK+ L +FQ+L +L LE+ + L ++ F LE+L L
Sbjct: 143 DISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFS---GLNSLEQLTL------- 192
Query: 376 LPDSTKQYSMRTIPTQIWKNFDFLVILFI--LNETVFHENYTYPDLEELR---------- 423
++ ++ +IPT+ + L++L + LN + Y++ L L+
Sbjct: 193 -----EKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRD-YSFKRLYRLKVLEISHWPYL 246
Query: 424 --LSGNPLHVL-------------PTGNLLPPQLSRLRSLDLSRCKIDYLPPNVFNNTRN 468
++ N L+ L L L LR L+LS I + ++ +
Sbjct: 247 DTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLR 306
Query: 469 ITSLNLANNNLSMTSELSFQFLDVLLELESLDLSNNNLTHISPTVLRHNRAITSIKLVGN 528
+ + L L+M +F+ L+ L L++S N LT + +V + ++ L N
Sbjct: 307 LQEIQLVGGQLAMVEPYAFRGLNY---LRVLNVSGNQLTTLEESVFHSVGNLETLILDSN 363
Query: 529 PWKCDCNIADMWEWATREKGDIGVLVGSTTPTEIGFGASRKKKGLVC---YFDIFTTPTR 585
P CDC + +W + R + + + E G K V YF R
Sbjct: 364 PLACDCRL--LWVFRRRWRLNFNRQQPTCATPEFVQGKEFKDFPDVLLPNYFTCRRARIR 421
Query: 586 KRPGRELFASTNKTWARYVKEADC--PSSKLFRPPRTN 621
R +++F T ++V AD P + L+ PR +
Sbjct: 422 DRKAQQVFVDEGHT-VQFVCRADGDPPPAILWLSPRKH 458
>sp|Q8VZG8|Y4885_ARATH Probable LRR receptor-like serine/threonine-protein kinase
At4g08850 OS=Arabidopsis thaliana GN=At4g08850 PE=1 SV=3
Length = 1045
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 150/548 (27%), Positives = 228/548 (41%), Gaps = 76/548 (13%)
Query: 6 PVYNDRRNLDNPGLITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTT 65
P D NLD L+ LN + P E L + + +Y + L+ P F NLT
Sbjct: 160 PELGDLSNLDTLHLVENKLNGS--IPSEIGRLTKVTEIAIY--DNLLTGPIPSSFGNLTK 215
Query: 66 LNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLK 125
L L L N L P L +L L L+R NLT PS+F NL ++ L + +N+L
Sbjct: 216 LVNLYLFINSLSGSIPSEIGNLPNLRELCLDRNNLTGKIPSSFGNLKNVTLLNMFENQLS 275
Query: 126 SHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQ 185
I +GN+ LDTL L + ++ + N L L+L N+L + + LG+
Sbjct: 276 GEIPPE--IGNMTALDTLSLHTNKLTGPIPSTLGNIKTLAVLHLYLNQL-NGSIPPELGE 332
Query: 186 NLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSL 245
+D L++S L GP+ D+F T L L+L N LS + + T+L L L
Sbjct: 333 MESMID-LEISENKLTGPVP-DSFGKLTALEWLFLRDNQLSGP-IPPGIANSTELTVLQL 389
Query: 246 RNCGLSRLPANTFHRFTCLQELDISHN--------------PLI------DAFTALLSP- 284
+ +T R L+ L + N LI ++F+ +S
Sbjct: 390 DTNNFTGFLPDTICRGGKLENLTLDDNHFEGPVPKSLRDCKSLIRVRFKGNSFSGDISEA 449
Query: 285 ---LESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLEL 341
+L +D+ +N + + + L ILS N + N+T LS L+L
Sbjct: 450 FGVYPTLNFIDLSNNNFHGQLSANWEQSQKLVAFILSNNSITGAIPPEIWNMTQLSQLDL 509
Query: 342 NNCGLT-RLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLV 400
++ +T L E++ + N + +L+L+GN L IP+ I
Sbjct: 510 SSNRITGELPESISNINR----ISKLQLNGNRLS-----------GKIPSGIR------- 547
Query: 401 ILFILNETVFHENYTYPDLEELRLSGNPLHVLPTGNLLPPQLSRLRSLDLSRCKIDYLPP 460
N Y DL R S + PT N LP RL ++LSR +D P
Sbjct: 548 ---------LLTNLEYLDLSSNRFSS---EIPPTLNNLP----RLYYMNLSRNDLDQTIP 591
Query: 461 NVFNNTRNITSLNLANNNLSMTSELSFQFLDVLLELESLDLSNNNLTHISPTVLRHNRAI 520
+ L+L+ N L E+S QF L LE LDLS+NNL+ P + A+
Sbjct: 592 EGLTKLSQLQMLDLSYNQLD--GEISSQFRS-LQNLERLDLSHNNLSGQIPPSFKDMLAL 648
Query: 521 TSIKLVGN 528
T + + N
Sbjct: 649 THVDVSHN 656
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 140/352 (39%), Gaps = 74/352 (21%)
Query: 41 SLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNL 100
++L+LY+ + L+ P + ++ L++S N L P F LT+LE+L L L
Sbjct: 313 AVLHLYLNQ--LNGSIPPELGEMESMIDLEISENKLTGPVPDSFGKLTALEWLFLRDNQL 370
Query: 101 TYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISN-LPDNV-- 157
+ P N L L+L N + T+ G GKL+ L L + +P ++
Sbjct: 371 SGPIPPGIANSTELTVLQLDTNNFTGFLPDTICRG--GKLENLTLDDNHFEGPVPKSLRD 428
Query: 158 --------FANNTWLRNLNLAEN-----ELIDLDVATTLGQ------------------- 185
F N++ +++ A IDL GQ
Sbjct: 429 CKSLIRVRFKGNSFSGDISEAFGVYPTLNFIDLSNNNFHGQLSANWEQSQKLVAFILSNN 488
Query: 186 -----------NLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLS-------- 226
N+ L LDLS+ + G L E + N ++ L L+GN LS
Sbjct: 489 SITGAIPPEIWNMTQLSQLDLSSNRITGELPE-SISNINRISKLQLNGNRLSGKIPSGIR 547
Query: 227 ---------------AADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISH 271
++++ L L +L+ ++L L + + + LQ LD+S+
Sbjct: 548 LLTNLEYLDLSSNRFSSEIPPTLNNLPRLYYMNLSRNDLDQTIPEGLTKLSQLQMLDLSY 607
Query: 272 NPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLE 323
N L ++ L++LE LD+ ++NL +F M +L + +S N L+
Sbjct: 608 NQLDGEISSQFRSLQNLERLDLSHNNLSGQIPPSFKDMLALTHVDVSHNNLQ 659
Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 80/157 (50%), Gaps = 5/157 (3%)
Query: 57 PQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKT 116
P+ +N+ ++KL L+GN L P LT+LEYL L+ + P +NL L
Sbjct: 519 PESISNINRISKLQLNGNRLSGKIPSGIRLLTNLEYLDLSSNRFSSEIPPTLNNLPRLYY 578
Query: 117 LELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELID 176
+ LS+N L I L L +L LDL + + + F + L L+L+ N L
Sbjct: 579 MNLSRNDLDQTIPEGLT--KLSQLQMLDLSYNQLDGEISSQFRSLQNLERLDLSHNNLSG 636
Query: 177 LDVATTLGQNLVHLDSLDLSNCHLKGPLSED-AFVNA 212
+ + ++++ L +D+S+ +L+GP+ ++ AF NA
Sbjct: 637 -QIPPSF-KDMLALTHVDVSHNNLQGPIPDNAAFRNA 671
Score = 36.2 bits (82), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 43/87 (49%)
Query: 42 LLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLT 101
L Y+ + L + P+ T L+ L LDLS N L F L +LE L L+ NL+
Sbjct: 576 LYYMNLSRNDLDQTIPEGLTKLSQLQMLDLSYNQLDGEISSQFRSLQNLERLDLSHNNLS 635
Query: 102 YISPSAFDNLNHLKTLELSQNKLKSHI 128
P +F ++ L +++S N L+ I
Sbjct: 636 GQIPPSFKDMLALTHVDVSHNNLQGPI 662
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 258,343,327
Number of Sequences: 539616
Number of extensions: 11012419
Number of successful extensions: 37671
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 532
Number of HSP's successfully gapped in prelim test: 528
Number of HSP's that attempted gapping in prelim test: 26033
Number of HSP's gapped (non-prelim): 5574
length of query: 694
length of database: 191,569,459
effective HSP length: 125
effective length of query: 569
effective length of database: 124,117,459
effective search space: 70622834171
effective search space used: 70622834171
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)