Your job contains 1 sequence.
>psy3329
MWQGHPVYNDRRNLDNPGLITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFF
TNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELS
QNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVA
TTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKL
HRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQR
ISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTY
PDLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTYPDLE
ELRLSGNPLHVLPTGNLLPPQLSRLRSLDLSRCKIDYLPPNVFNNTRNITSLNLANNNLS
MTSELSFQFLDVLLELESLDLSNNNLTHISPTVLRHNRAITSIKLVGNPWKCDCNIADMW
EWATREKGDIGVLVGSTTPTEIGFGASRKKKGLVCYFDIFTTPTRKRPGRELFASTNKTW
ARYVKEADCPSSKLFRPPRTNSRKTRAAPSYINMEKLNSKSFLTLGNFGLISVGVIILSA
MVYFSFYARHLYRTKQQRIRRNTFKSPCASDDED
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy3329
(694 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q8TF66 - symbol:LRRC15 "Leucine-rich repeat-con... 335 1.8e-27 1
RGD|70551 - symbol:Lrrc15 "leucine rich repeat containing... 329 8.6e-27 1
MGI|MGI:1921738 - symbol:Lrrc15 "leucine rich repeat cont... 322 5.3e-26 1
UNIPROTKB|P35858 - symbol:IGFALS "Insulin-like growth fac... 309 3.5e-25 2
UNIPROTKB|F1NI07 - symbol:IGFALS "Uncharacterized protein... 307 3.0e-24 1
WB|WBGene00022129 - symbol:lron-11 species:6239 "Caenorha... 296 8.5e-24 2
FB|FBgn0028888 - symbol:CG4168 species:7227 "Drosophila m... 313 3.2e-23 2
RGD|1308146 - symbol:Shoc2 "soc-2 (suppressor of clear) h... 295 5.8e-23 1
UNIPROTKB|E2R260 - symbol:SHOC2 "Uncharacterized protein"... 295 5.8e-23 1
UNIPROTKB|P22792 - symbol:CPN2 "Carboxypeptidase N subuni... 292 1.0e-22 1
ZFIN|ZDB-GENE-080327-16 - symbol:lingo1a "leucine rich re... 293 1.1e-22 1
UNIPROTKB|Q5TJ59 - symbol:TLR3 "Toll-like receptor 3" spe... 296 1.2e-22 1
UNIPROTKB|A5H649 - symbol:TLR3 "Toll-like receptor 3" spe... 296 1.2e-22 1
UNIPROTKB|A6QLV3 - symbol:SHOC2 "Leucine-rich repeat prot... 291 1.6e-22 1
UNIPROTKB|Q9UQ13 - symbol:SHOC2 "Leucine-rich repeat prot... 291 1.6e-22 1
UNIPROTKB|F2Z5G0 - symbol:SHOC2 "Uncharacterized protein"... 291 1.6e-22 1
UNIPROTKB|Q5RAV5 - symbol:SHOC2 "Leucine-rich repeat prot... 291 1.6e-22 1
MGI|MGI:1919006 - symbol:Cpn2 "carboxypeptidase N, polype... 288 2.8e-22 1
RGD|68429 - symbol:Igfals "insulin-like growth factor bin... 283 4.2e-22 2
MGI|MGI:1927197 - symbol:Shoc2 "soc-2 (suppressor of clea... 286 5.8e-22 1
FB|FBgn0259677 - symbol:CG42346 species:7227 "Drosophila ... 291 1.1e-21 1
UNIPROTKB|E1BU15 - symbol:SHOC2 "Leucine-rich repeat prot... 283 1.2e-21 1
ZFIN|ZDB-GENE-031113-8 - symbol:lrrc15 "leucine rich repe... 282 1.5e-21 1
UNIPROTKB|F1LRE2 - symbol:Igfals "Insulin-like growth fac... 278 1.6e-21 2
FB|FBgn0029114 - symbol:Tollo "Tollo" species:7227 "Droso... 280 3.9e-21 2
UNIPROTKB|Q1KS52 - symbol:ALS "Acid-labile subunit" speci... 278 5.0e-21 1
MGI|MGI:107973 - symbol:Igfals "insulin-like growth facto... 269 1.0e-20 2
UNIPROTKB|F1NG27 - symbol:TLR3 "Uncharacterized protein" ... 278 1.1e-20 1
FB|FBgn0261269 - symbol:conv "convoluted" species:7227 "D... 279 1.2e-20 1
MGI|MGI:2443955 - symbol:Lrig3 "leucine-rich repeats and ... 277 2.1e-20 1
FB|FBgn0032479 - symbol:CG16974 species:7227 "Drosophila ... 242 2.1e-20 2
FB|FBgn0243486 - symbol:rdo "reduced ocelli" species:7227... 259 4.7e-20 2
MGI|MGI:2444651 - symbol:Lingo4 "leucine rich repeat and ... 254 5.3e-20 2
UNIPROTKB|Q8AVI4 - symbol:shoc2 "Leucine-rich repeat prot... 268 5.6e-20 1
RGD|1560339 - symbol:Lgr6 "leucine-rich repeat-containing... 272 5.8e-20 1
FB|FBgn0264089 - symbol:sli "slit" species:7227 "Drosophi... 186 6.1e-20 3
ZFIN|ZDB-GENE-091214-3 - symbol:lingo4b "leucine rich rep... 267 8.1e-20 1
MGI|MGI:107935 - symbol:Lrig1 "leucine-rich repeats and i... 271 9.0e-20 1
UNIPROTKB|F1MT22 - symbol:LGR5 "Uncharacterized protein" ... 269 1.1e-19 1
UNIPROTKB|F1NKM7 - symbol:LGR6 "Uncharacterized protein" ... 268 1.2e-19 1
RGD|2724 - symbol:Gp5 "glycoprotein V (platelet)" species... 263 1.9e-19 1
WB|WBGene00002282 - symbol:let-4 species:6239 "Caenorhabd... 264 2.9e-19 1
UNIPROTKB|Q9HBX8 - symbol:LGR6 "Leucine-rich repeat-conta... 265 3.4e-19 1
UNIPROTKB|Q6UY18 - symbol:LINGO4 "Leucine-rich repeat and... 248 4.0e-19 2
MGI|MGI:1341817 - symbol:Lgr5 "leucine rich repeat contai... 263 5.0e-19 1
UNIPROTKB|E1BG29 - symbol:GP5 "Uncharacterized protein" s... 259 5.7e-19 1
MGI|MGI:2441805 - symbol:Lgr6 "leucine-rich repeat-contai... 262 7.1e-19 1
UNIPROTKB|E1C2F8 - symbol:LGR5 "Uncharacterized protein" ... 261 7.2e-19 1
UNIPROTKB|P0C6S8 - symbol:LINGO3 "Leucine-rich repeat and... 258 7.6e-19 1
UNIPROTKB|E2RGS8 - symbol:LGR6 "Uncharacterized protein" ... 261 9.1e-19 1
ZFIN|ZDB-GENE-040220-5 - symbol:tlr22 "toll-like receptor... 253 1.4e-18 2
MGI|MGI:2442298 - symbol:Lingo2 "leucine rich repeat and ... 255 1.7e-18 1
FB|FBgn0004364 - symbol:18w "18 wheeler" species:7227 "Dr... 259 1.7e-18 2
RGD|1307733 - symbol:Lgr5 "leucine rich repeat containing... 258 1.8e-18 1
UNIPROTKB|D8MCT0 - symbol:LGR5 "Leucine-rich repeat-conta... 257 2.0e-18 1
UNIPROTKB|Q7L985 - symbol:LINGO2 "Leucine-rich repeat and... 254 2.2e-18 1
UNIPROTKB|O75473 - symbol:LGR5 "Leucine-rich repeat-conta... 257 2.2e-18 1
TAIR|locus:2094613 - symbol:RLP38 "receptor like protein ... 255 2.9e-18 1
UNIPROTKB|Q96JA1 - symbol:LRIG1 "Leucine-rich repeats and... 268 3.4e-18 2
FB|FBgn0033250 - symbol:CG14762 species:7227 "Drosophila ... 247 6.5e-18 1
RGD|1562655 - symbol:Tlr13 "toll-like receptor 13" specie... 253 7.0e-18 1
ZFIN|ZDB-GENE-061103-397 - symbol:zgc:153913 "zgc:153913"... 244 1.7e-17 1
UNIPROTKB|F1MJZ4 - symbol:IGFALS "Uncharacterized protein... 239 2.0e-17 2
UNIPROTKB|F1NEL3 - symbol:LGR4 "Uncharacterized protein" ... 249 2.1e-17 1
UNIPROTKB|Q96FE5 - symbol:LINGO1 "Leucine-rich repeat and... 241 3.3e-17 2
UNIPROTKB|Q56R09 - symbol:Q56R09 "Toll-like receptor 9" s... 247 3.4e-17 1
UNIPROTKB|Q7Z2Q7 - symbol:LRRC70 "Leucine-rich repeat-con... 243 3.8e-17 1
UNIPROTKB|F1NJ43 - symbol:NYX "Uncharacterized protein" s... 240 3.8e-17 1
UNIPROTKB|Q50L44 - symbol:LINGO1 "Leucine-rich repeat and... 241 4.0e-17 2
MGI|MGI:3045213 - symbol:Tlr13 "toll-like receptor 13" sp... 246 4.1e-17 1
WB|WBGene00020649 - symbol:sma-10 species:6239 "Caenorhab... 245 4.3e-17 1
UNIPROTKB|G3X6G8 - symbol:LGR6 "Uncharacterized protein" ... 245 4.8e-17 1
UNIPROTKB|P40197 - symbol:GP5 "Platelet glycoprotein V" s... 241 5.0e-17 1
UNIPROTKB|E1BAW2 - symbol:LRRC32 "Uncharacterized protein... 242 5.5e-17 1
FB|FBgn0034540 - symbol:Lrt "Leucine-rich tendon-specific... 243 6.2e-17 1
FB|FBgn0036494 - symbol:Toll-6 "Toll-6" species:7227 "Dro... 228 6.7e-17 2
ZFIN|ZDB-GENE-090630-1 - symbol:lrrc32 "leucine rich repe... 241 7.1e-17 1
ZFIN|ZDB-GENE-040912-136 - symbol:lingo1b "leucine rich r... 240 8.1e-17 1
UNIPROTKB|F1LS74 - symbol:Slit1 "Slit homolog 1 protein" ... 231 8.9e-17 2
UNIPROTKB|Q14392 - symbol:LRRC32 "Leucine-rich repeat-con... 240 9.2e-17 1
RGD|69307 - symbol:Slit1 "slit homolog 1 (Drosophila)" sp... 231 1.1e-16 2
UNIPROTKB|O88279 - symbol:Slit1 "Slit homolog 1 protein" ... 231 1.1e-16 2
UNIPROTKB|F1MBT2 - symbol:LINGO1 "Uncharacterized protein... 237 1.1e-16 2
UNIPROTKB|F1SJ87 - symbol:LINGO1 "Uncharacterized protein... 237 1.2e-16 2
MGI|MGI:2669796 - symbol:Rtn4rl2 "reticulon 4 receptor-li... 181 1.2e-16 2
UNIPROTKB|F1S5B4 - symbol:LGR6 "Uncharacterized protein" ... 240 1.8e-16 1
UNIPROTKB|P02750 - symbol:LRG1 "Leucine-rich alpha-2-glyc... 200 1.8e-16 2
MGI|MGI:1915522 - symbol:Lingo1 "leucine rich repeat and ... 235 1.9e-16 2
UNIPROTKB|F1PGX0 - symbol:LINGO1 "Uncharacterized protein... 235 1.9e-16 2
UNIPROTKB|G3V881 - symbol:Lingo1 "Leucine rich repeat neu... 235 1.9e-16 2
ZFIN|ZDB-GENE-050506-80 - symbol:lrrtm1 "leucine rich rep... 207 2.0e-16 2
MGI|MGI:3609246 - symbol:Lingo3 "leucine rich repeat and ... 236 2.0e-16 1
MGI|MGI:2156367 - symbol:Tlr3 "toll-like receptor 3" spec... 239 2.0e-16 1
FB|FBgn0034476 - symbol:Toll-7 "Toll-7" species:7227 "Dro... 252 2.5e-16 2
RGD|727797 - symbol:Rtn4rl2 "reticulon 4 receptor-like 2"... 180 2.6e-16 2
MGI|MGI:1315203 - symbol:Slit1 "slit homolog 1 (Drosophil... 228 2.9e-16 2
FB|FBgn0052055 - symbol:CG32055 species:7227 "Drosophila ... 224 3.2e-16 2
RGD|1309087 - symbol:Lrrc32 "leucine rich repeat containi... 235 3.3e-16 1
UNIPROTKB|Q7L0X0 - symbol:TRIL "TLR4 interactor with leuc... 236 3.6e-16 1
UNIPROTKB|F1NVW6 - symbol:F1NVW6 "Uncharacterized protein... 170 4.1e-16 2
WARNING: Descriptions of 1003 database sequences were not reported due to the
limiting value of parameter V = 100.
>UNIPROTKB|Q8TF66 [details] [associations]
symbol:LRRC15 "Leucine-rich repeat-containing protein 15"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
GO:GO:0016021 EMBL:CH471052 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
SMART:SM00013 InterPro:IPR025875 Pfam:PF12799 EMBL:AC125362
EMBL:AC174158 EMBL:AB071037 EMBL:BC101064 EMBL:BC101065
EMBL:BK001325 IPI:IPI00152871 IPI:IPI00913924 RefSeq:NP_001128529.2
RefSeq:NP_570843.2 UniGene:Hs.288467 ProteinModelPortal:Q8TF66
SMR:Q8TF66 IntAct:Q8TF66 STRING:Q8TF66 PhosphoSite:Q8TF66
DMDM:30794642 PaxDb:Q8TF66 PeptideAtlas:Q8TF66 PRIDE:Q8TF66
Ensembl:ENST00000347624 Ensembl:ENST00000428839
Ensembl:ENST00000439944 GeneID:131578 KEGG:hsa:131578
UCSC:uc003ftt.3 UCSC:uc003ftu.3 CTD:131578 GeneCards:GC03M194075
H-InvDB:HIX0003982 HGNC:HGNC:20818 HPA:HPA035503 neXtProt:NX_Q8TF66
PharmGKB:PA134956867 HOGENOM:HOG000040004 HOVERGEN:HBG052343
InParanoid:Q8TF66 OMA:NHLEYIP OrthoDB:EOG4QVCCN ChiTaRS:LRRC15
GenomeRNAi:131578 NextBio:82942 Bgee:Q8TF66 CleanEx:HS_LRRC15
Genevestigator:Q8TF66 GermOnline:ENSG00000172061 Uniprot:Q8TF66
Length = 581
Score = 335 (123.0 bits), Expect = 1.8e-27, P = 1.8e-27
Identities = 113/354 (31%), Positives = 175/354 (49%)
Query: 24 LNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGV 83
LN + + E FL +L+ L +++ LS+I P F NL +L L L+ N L+++ G+
Sbjct: 61 LNTHITELNESPFLNISALIALRIEKNELSRITPGAFRNLGSLRYLSLANNKLQVLPIGL 120
Query: 84 FDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTL 143
F L SLE L+L+ L I P+ F ++LK L+L N L+ D +L L L
Sbjct: 121 FQGLDSLESLLLSSNQLLQIQPAHFSQCSNLKELQLHGNHLEYIPDGAF--DHLVGLTKL 178
Query: 144 DLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGP 203
+L ++ ++++ VF + L+ L L EN L D+ + T G LV+L L L + G
Sbjct: 179 NLGKNSLTHISPRVFQHLGNLQVLRLYENRLTDIPMGTFDG--LVNLQELALQQNQI-GL 235
Query: 204 LSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTC 263
LS F N L+ LYLS N +S SV ++ L +L+RL+L L L F
Sbjct: 236 LSPGLFHNNHNLQRLYLSNNHISQLPPSVFMQ-LPQLNRLTLFGNSLKELSPGIFGPMPN 294
Query: 264 LQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLE 323
L+EL + N + + S L L+ L + + + IS F +T L+ L L N L+
Sbjct: 295 LRELWLYDNHISSLPDNVFSNLRQLQVLILSRNQISFISPGAFNGLTELRELSLHTNALQ 354
Query: 324 TLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLP 377
L+ +F+ L +L + L N L +L +F N L ++L N L LP
Sbjct: 355 DLDGNVFRMLANLQNISLQNNRLRQLPGNIF-ANVN--GLMAIQLQNNQLENLP 405
Score = 321 (118.1 bits), Expect = 7.0e-26, P = 7.0e-26
Identities = 113/366 (30%), Positives = 169/366 (46%)
Query: 9 NDRRNLDNPGLITINLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLN 67
N+ L+ LI + + N + + GAF SL YL + L + F L +L
Sbjct: 69 NESPFLNISALIALRIEKNELSRITPGAFRNLGSLRYLSLANNKLQVLPIGLFQGLDSLE 128
Query: 68 KLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSH 127
L LS N L I+P F ++L+ L L+ +L YI AFD+L L L L +N L +H
Sbjct: 129 SLLLSSNQLLQIQPAHFSQCSNLKELQLHGNHLEYIPDGAFDHLVGLTKLNLGKNSL-TH 187
Query: 128 IDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNL 187
I V +LG L L L ++ ++++P F L+ L L +N+ I L ++ L N
Sbjct: 188 IS-PRVFQHLGNLQVLRLYENRLTDIPMGTFDGLVNLQELALQQNQ-IGL-LSPGLFHNN 244
Query: 188 VHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVAL-KPLTKLHRLSLR 246
+L L LSN H+ L F+ +L L L GN L +LS + P+ L L L
Sbjct: 245 HNLQRLYLSNNHIS-QLPPSVFMQLPQLNRLTLFGNSLK--ELSPGIFGPMPNLRELWLY 301
Query: 247 NCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTF 306
+ +S LP N F LQ L +S N + + L L L + + LQ + + F
Sbjct: 302 DNHISSLPDNVFSNLRQLQVLILSRNQISFISPGAFNGLTELRELSLHTNALQDLDGNVF 361
Query: 307 LKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEEL 366
+ +L+ + L N+L L +F N+ L ++L N L L +F L EL
Sbjct: 362 RMLANLQNISLQNNRLRQLPGNIFANVNGLMAIQLQNNQLENLPLGIFDH---LGKLCEL 418
Query: 367 RLSGNP 372
RL NP
Sbjct: 419 RLYDNP 424
Score = 198 (74.8 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 80/288 (27%), Positives = 132/288 (45%)
Query: 86 PLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDL 145
P ++ +LN ++T ++ S F N++ L L + +N+L S I NLG L L L
Sbjct: 52 PWNAMSLQILNT-HITELNESPFLNISALIALRIEKNEL-SRIT-PGAFRNLGSLRYLSL 108
Query: 146 RQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLS 205
+ + LP +F L +L L+ N+L+ + A +L L L HL+ +
Sbjct: 109 ANNKLQVLPIGLFQGLDSLESLLLSSNQLLQIQPAHF--SQCSNLKELQLHGNHLEY-IP 165
Query: 206 EDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQ 265
+ AF + L L L N L+ V + L L L L L+ +P TF LQ
Sbjct: 166 DGAFDHLVGLTKLNLGKNSLTHISPRV-FQHLGNLQVLRLYENRLTDIPMGTFDGLVNLQ 224
Query: 266 ELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETL 325
EL + N + L +L+ L + +++ ++ S F+++ L L L GN L+ L
Sbjct: 225 ELALQQNQIGLLSPGLFHNNHNLQRLYLSNNHISQLPPSVFMQLPQLNRLTLFGNSLKEL 284
Query: 326 ESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPL 373
G+F + +L L L + ++ L + VF N L+ L LS N +
Sbjct: 285 SPGIFGPMPNLRELWLYDNHISSLPDNVF-SNLR--QLQVLILSRNQI 329
Score = 186 (70.5 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 93/402 (23%), Positives = 160/402 (39%)
Query: 166 NLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPL 225
+L + + +L+ + L N+ L +L + L ++ AF N LR L L+ N L
Sbjct: 57 SLQILNTHITELNESPFL--NISALIALRIEKNELSR-ITPGAFRNLGSLRYLSLANNKL 113
Query: 226 SAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPL 285
+ + + L L L L + L ++ F + + L+EL + N L L
Sbjct: 114 QVLPIGL-FQGLDSLESLLLSSNQLLQIQPAHFSQCSNLKELQLHGNHLEYIPDGAFDHL 172
Query: 286 ESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCG 345
L L++G ++L IS F + +L+ L L N+L + G F L +L L L
Sbjct: 173 VGLTKLNLGKNSLTHISPRVFQHLGNLQVLRLYENRLTDIPMGTFDGLVNLQELALQQNQ 232
Query: 346 LTRLNETVFHENYTYPDLEELRLSGNPLHVLPDST----KQYSMRTIPTQIWKNFDFLVI 401
+ L+ +FH N+ +L+ L LS N + LP S Q + T+ K +
Sbjct: 233 IGLLSPGLFHNNH---NLQRLYLSNNHISQLPPSVFMQLPQLNRLTLFGNSLKELSPGIF 289
Query: 402 --LFILNETVFHENY--TYPD--------LEELRLSGNPLHVLPTGNXXXXXXXXXXXXX 449
+ L E ++N+ + PD L+ L LS N + + G
Sbjct: 290 GPMPNLRELWLYDNHISSLPDNVFSNLRQLQVLILSRNQISFISPGAFNGLTELRELSLH 349
Query: 450 XXXCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSFQFXXXXXXXXXXXXXXXXXTHI 509
+ D L NVF N+ +++L NN L +L ++
Sbjct: 350 TNALQ-D-LDGNVFRMLANLQNISLQNNRLR---QLPGNIFANVNGLMAIQLQNNQLENL 404
Query: 510 SPTVLRHNRAITSIKLVGNPWKCDCNIADMWEWATREKGDIG 551
+ H + ++L NPW+CD +I + W + +G
Sbjct: 405 PLGIFDHLGKLCELRLYDNPWRCDSDILPLRNWLLLNQPRLG 446
>RGD|70551 [details] [associations]
symbol:Lrrc15 "leucine rich repeat containing 15" species:10116
"Rattus norvegicus" [GO:0005622 "intracellular" evidence=IDA]
[GO:0007154 "cell communication" evidence=TAS] [GO:0016021 "integral
to membrane" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 RGD:70551 GO:GO:0016021 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005622
InterPro:IPR000372 SMART:SM00013 GO:GO:0007154 CTD:131578
HOVERGEN:HBG052343 EMBL:AB071036 IPI:IPI00201949 RefSeq:NP_659551.1
UniGene:Rn.213072 ProteinModelPortal:Q8R5M3 PRIDE:Q8R5M3
GeneID:246296 KEGG:rno:246296 UCSC:RGD:70551 NextBio:623686
Genevestigator:Q8R5M3 Uniprot:Q8R5M3
Length = 578
Score = 329 (120.9 bits), Expect = 8.6e-27, P = 8.6e-27
Identities = 111/360 (30%), Positives = 164/360 (45%)
Query: 14 LDNPGLITINLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLS 72
L+ LI + + N + + GAF SL YL + L + + F ++ L L LS
Sbjct: 74 LNISALIALKMEKNELSTIMPGAFRNLGSLRYLSLANNKLRMLPIRVFQDVNNLESLLLS 133
Query: 73 GNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTL 132
N L I+P F ++L L L+ NL I AFD+L L L L +N +H+ L
Sbjct: 134 NNQLVQIQPAQFSQFSNLRELQLHGNNLESIPEEAFDHLVGLTKLNLGRNSF-THLSPRL 192
Query: 133 VLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDS 192
+LG L L L ++ +S++P F L+ L L EN++ L L N +L
Sbjct: 193 -FQHLGNLQVLRLHENRLSDIPMGTFDALGNLQELALQENQIGTLSPG--LFHNNRNLQR 249
Query: 193 LDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSR 252
L LSN H+ L F+ +L L L GN L V P+ L L L N ++
Sbjct: 250 LYLSNNHIS-QLPPGIFMQLPQLNKLTLFGNSLRELSPGV-FGPMPNLRELWLYNNHITS 307
Query: 253 LPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSL 312
L NTF LQ L +SHN L + L +L L + + LQ + + F + +L
Sbjct: 308 LADNTFSHLNQLQVLILSHNQLTYISPGAFNGLTNLRELSLHTNALQDLDSNVFRSLANL 367
Query: 313 KTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNP 372
+ + L N+L L +F N+ L+ ++L N L L +F +L ELRL NP
Sbjct: 368 QNISLQSNRLRQLPGSIFANVNGLTTIQLQNNNLENLPLGIFDH---LVNLCELRLYDNP 424
Score = 321 (118.1 bits), Expect = 6.8e-26, P = 6.8e-26
Identities = 107/354 (30%), Positives = 175/354 (49%)
Query: 24 LNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGV 83
+N + + E FL +L+ L M++ LS I P F NL +L L L+ N LR++ V
Sbjct: 61 VNTHITELPENLFLNISALIALKMEKNELSTIMPGAFRNLGSLRYLSLANNKLRMLPIRV 120
Query: 84 FDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTL 143
F + +LE L+L+ L I P+ F ++L+ L+L N L+S + +L L L
Sbjct: 121 FQDVNNLESLLLSNNQLVQIQPAQFSQFSNLRELQLHGNNLESIPEEAF--DHLVGLTKL 178
Query: 144 DLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGP 203
+L ++ ++L +F + L+ L L EN L D+ + T L +L L L + G
Sbjct: 179 NLGRNSFTHLSPRLFQHLGNLQVLRLHENRLSDIPMGTF--DALGNLQELALQENQI-GT 235
Query: 204 LSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTC 263
LS F N L+ LYLS N +S + ++ L +L++L+L L L F
Sbjct: 236 LSPGLFHNNRNLQRLYLSNNHISQLPPGIFMQ-LPQLNKLTLFGNSLRELSPGVFGPMPN 294
Query: 264 LQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLE 323
L+EL + +N + S L L+ L + ++ L IS F +T+L+ L L N L+
Sbjct: 295 LRELWLYNNHITSLADNTFSHLNQLQVLILSHNQLTYISPGAFNGLTNLRELSLHTNALQ 354
Query: 324 TLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLP 377
L+S +F++L +L + L + L +L ++F N L ++L N L LP
Sbjct: 355 DLDSNVFRSLANLQNISLQSNRLRQLPGSIF-ANVN--GLTTIQLQNNNLENLP 405
Score = 222 (83.2 bits), Expect = 6.6e-15, P = 6.6e-15
Identities = 79/234 (33%), Positives = 115/234 (49%)
Query: 24 LNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPG 82
L N I + G F R+L LY+ +S++ P F L LNKL L GN LR + PG
Sbjct: 228 LQENQIGTLSPGLFHNNRNLQRLYLSNNHISQLPPGIFMQLPQLNKLTLFGNSLRELSPG 287
Query: 83 VFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDT 142
VF P+ +L L L ++T ++ + F +LN L+ L LS N+L ++I G L L
Sbjct: 288 VFGPMPNLRELWLYNNHITSLADNTFSHLNQLQVLILSHNQL-TYISPGAFNG-LTNLRE 345
Query: 143 LDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKG 202
L L + + +L NVF + L+N++L N L L ++ N+ L ++ L N +L+
Sbjct: 346 LSLHTNALQDLDSNVFRSLANLQNISLQSNRLRQLP--GSIFANVNGLTTIQLQNNNLEN 403
Query: 203 -PLSE-DAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLP 254
PL D VN +LR LY NP D + PL L+ G LP
Sbjct: 404 LPLGIFDHLVNLCELR-LY--DNPWRC-DSDIL--PLHNWLLLNRARLGTDTLP 451
Score = 220 (82.5 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 97/356 (27%), Positives = 149/356 (41%)
Query: 142 TLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLK 201
+L + + I+ LP+N+F N + L L + +NEL + +NL L L L+N L+
Sbjct: 57 SLQVVNTHITELPENLFLNISALIALKMEKNELSTIMPGAF--RNLGSLRYLSLANNKLR 114
Query: 202 GPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRF 261
L F + L +L LS N L + L L L L +P F
Sbjct: 115 -MLPIRVFQDVNNLESLLLSNNQLVQIQ-PAQFSQFSNLRELQLHGNNLESIPEEAFDHL 172
Query: 262 TCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNK 321
L +L++ N L L +L+ L + + L I TF + +L+ L L N+
Sbjct: 173 VGLTKLNLGRNSFTHLSPRLFQHLGNLQVLRLHENRLSDIPMGTFDALGNLQELALQENQ 232
Query: 322 LETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVL----- 376
+ TL GLF N +L L L+N +++L +F + P L +L L GN L L
Sbjct: 233 IGTLSPGLFHNNRNLQRLYLSNNHISQLPPGIFMQ---LPQLNKLTLFGNSLRELSPGVF 289
Query: 377 ---PDSTKQYSMRTIPTQIWKN-FDFLVILFILNETVFHENYTY--P-------DLEELR 423
P+ + + T + N F L L +L + H TY P +L EL
Sbjct: 290 GPMPNLRELWLYNNHITSLADNTFSHLNQLQVL--ILSHNQLTYISPGAFNGLTNLRELS 347
Query: 424 LSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNL 479
L N L L + N ++ LP ++F N +T++ L NNNL
Sbjct: 348 LHTNALQDLDS-NVFRSLANLQNISLQSN-RLRQLPGSIFANVNGLTTIQLQNNNL 401
Score = 209 (78.6 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 83/295 (28%), Positives = 136/295 (46%)
Query: 86 PLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDL 145
P ++ ++N ++T + + F N++ L L++ +N+L + + NLG L L L
Sbjct: 52 PWNAMSLQVVNT-HITELPENLFLNISALIALKMEKNELSTIMPGAF--RNLGSLRYLSL 108
Query: 146 RQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLS 205
+ + LP VF + L +L L+ N+L+ + A +L L L +L+ +
Sbjct: 109 ANNKLRMLPIRVFQDVNNLESLLLSNNQLVQIQPAQF--SQFSNLRELQLHGNNLES-IP 165
Query: 206 EDAFVNATKLRTLYLSGNPLSAADLSVAL-KPLTKLHRLSLRNCGLSRLPANTFHRFTCL 264
E+AF + L L L N S LS L + L L L L LS +P TF L
Sbjct: 166 EEAFDHLVGLTKLNLGRN--SFTHLSPRLFQHLGNLQVLRLHENRLSDIPMGTFDALGNL 223
Query: 265 QELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLET 324
QEL + N + L +L+ L + +++ ++ F+++ L L L GN L
Sbjct: 224 QELALQENQIGTLSPGLFHNNRNLQRLYLSNNHISQLPPGIFMQLPQLNKLTLFGNSLRE 283
Query: 325 LESGLFQNLTHLSVLELNNCGLTRLNETVF-HENYTYPDLEELRLSGNPL-HVLP 377
L G+F + +L L L N +T L + F H N L+ L LS N L ++ P
Sbjct: 284 LSPGVFGPMPNLRELWLYNNHITSLADNTFSHLN----QLQVLILSHNQLTYISP 334
Score = 190 (71.9 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 74/314 (23%), Positives = 123/314 (39%)
Query: 238 TKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSN 297
+ L L L L +P F L +L++ N L L +L+ L + +
Sbjct: 149 SNLRELQLHGNNLESIPEEAFDHLVGLTKLNLGRNSFTHLSPRLFQHLGNLQVLRLHENR 208
Query: 298 LQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHEN 357
L I TF + +L+ L L N++ TL GLF N +L L L+N +++L +F +
Sbjct: 209 LSDIPMGTFDALGNLQELALQENQIGTLSPGLFHNNRNLQRLYLSNNHISQLPPGIFMQ- 267
Query: 358 YTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTYP 417
P L +L L GN L L S + ++W + + L + T H N
Sbjct: 268 --LPQLNKLTLFGNSLREL--SPGVFGPMPNLRELWLYNNHITSL--ADNTFSHLN---- 317
Query: 418 DLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANN 477
L+ L LS N L + G + D L NVF + N+ +++L +N
Sbjct: 318 QLQVLILSHNQLTYISPGAFNGLTNLRELSLHTNALQ-D-LDSNVFRSLANLQNISLQSN 375
Query: 478 NLSMTSELSFQFXXXXXXXXXXXXXXXXXTHISPTVLRHNRAITSIKLVGNPWKCDCNIA 537
L +L ++ + H + ++L NPW+CD +I
Sbjct: 376 RLR---QLPGSIFANVNGLTTIQLQNNNLENLPLGIFDHLVNLCELRLYDNPWRCDSDIL 432
Query: 538 DMWEWATREKGDIG 551
+ W + +G
Sbjct: 433 PLHNWLLLNRARLG 446
Score = 127 (49.8 bits), Expect = 0.00015, P = 0.00015
Identities = 65/264 (24%), Positives = 109/264 (41%)
Query: 243 LSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRIS 302
L + N ++ LP N F + L L + N L L SL +L + + L+ +
Sbjct: 58 LQVVNTHITELPENLFLNISALIALKMEKNELSTIMPGAFRNLGSLRYLSLANNKLRMLP 117
Query: 303 RSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLEL--NNC------------GLTR 348
F + +L++L+LS N+L ++ F ++L L+L NN GLT+
Sbjct: 118 IRVFQDVNNLESLLLSNNQLVQIQPAQFSQFSNLRELQLHGNNLESIPEEAFDHLVGLTK 177
Query: 349 LNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPT-QIWKNFDFLVI----LF 403
LN + ++T+ + GN L VL + S + T N L + +
Sbjct: 178 LN--LGRNSFTHLSPRLFQHLGN-LQVLRLHENRLSDIPMGTFDALGNLQELALQENQIG 234
Query: 404 ILNETVFHENYTYPDLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVF 463
L+ +FH N +L+ L LS N + LP G + L P VF
Sbjct: 235 TLSPGLFHNNR---NLQRLYLSNNHISQLPPGIFMQLPQLNKLTLFGNSLR--ELSPGVF 289
Query: 464 NNTRNITSLNLANNNLSMTSELSF 487
N+ L L NN+++ ++ +F
Sbjct: 290 GPMPNLRELWLYNNHITSLADNTF 313
>MGI|MGI:1921738 [details] [associations]
symbol:Lrrc15 "leucine rich repeat containing 15"
species:10090 "Mus musculus" [GO:0005622 "intracellular"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:1921738 GO:GO:0016021
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00700000104286 CTD:131578 HOGENOM:HOG000040004
HOVERGEN:HBG052343 OMA:NHLEYIP OrthoDB:EOG4QVCCN EMBL:BC050245
IPI:IPI00330681 RefSeq:NP_083249.1 UniGene:Mm.290677
ProteinModelPortal:Q80X72 SMR:Q80X72 STRING:Q80X72
PhosphoSite:Q80X72 PRIDE:Q80X72 Ensembl:ENSMUST00000064606
GeneID:74488 KEGG:mmu:74488 UCSC:uc007ywn.2 InParanoid:Q80X72
NextBio:340930 Bgee:Q80X72 CleanEx:MM_LRRC15 Genevestigator:Q80X72
GermOnline:ENSMUSG00000052316 Uniprot:Q80X72
Length = 579
Score = 322 (118.4 bits), Expect = 5.3e-26, P = 5.3e-26
Identities = 110/360 (30%), Positives = 161/360 (44%)
Query: 14 LDNPGLITINLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLS 72
L+ LI + + N + + GAF SL +L + L + + F ++ L L LS
Sbjct: 74 LNISALIALKMEKNELANIMPGAFRNLGSLRHLSLANNKLKNLPVRLFQDVNNLETLLLS 133
Query: 73 GNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTL 132
N L I+P F ++L+ L L NL YI FD+L L L L N +H+
Sbjct: 134 NNQLVQIQPAQFSQFSNLKELQLYGNNLEYIPEGVFDHLVGLTKLNLGNNGF-THLS-PR 191
Query: 133 VLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDS 192
V +LG L L L ++ +S++P F L+ L L EN++ L L N +L
Sbjct: 192 VFQHLGNLQVLRLYENRLSDIPMGTFDALGNLQELALQENQIGTLSPG--LFHNNRNLQR 249
Query: 193 LDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSR 252
L LSN H+ L F+ L L L GN L V P+ L L L N ++
Sbjct: 250 LYLSNNHISH-LPPGIFMQLPHLNKLTLFGNSLKELSPGV-FGPMPNLRELWLYNNHITS 307
Query: 253 LPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSL 312
LP N F LQ L +SHN L + L +L L + + LQ + + F + +L
Sbjct: 308 LPDNAFSHLNQLQVLILSHNQLSYISPGAFNGLTNLRELSLHTNALQDLDGNVFRSLANL 367
Query: 313 KTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNP 372
+ + L N+L L +F N+ L ++L N L L +F +L ELRL NP
Sbjct: 368 RNVSLQNNRLRQLPGSIFANVNGLMTIQLQNNNLENLPLGIFDH---LGNLCELRLYDNP 424
Score = 318 (117.0 bits), Expect = 1.5e-25, P = 1.5e-25
Identities = 109/354 (30%), Positives = 173/354 (48%)
Query: 24 LNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGV 83
LN + + E FL +L+ L M++ L+ I P F NL +L L L+ N L+ + +
Sbjct: 61 LNTHITELPEDKFLNISALIALKMEKNELANIMPGAFRNLGSLRHLSLANNKLKNLPVRL 120
Query: 84 FDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTL 143
F + +LE L+L+ L I P+ F ++LK L+L N L+ +I V +L L L
Sbjct: 121 FQDVNNLETLLLSNNQLVQIQPAQFSQFSNLKELQLYGNNLE-YIPEG-VFDHLVGLTKL 178
Query: 144 DLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGP 203
+L +G ++L VF + L+ L L EN L D+ + T L +L L L + G
Sbjct: 179 NLGNNGFTHLSPRVFQHLGNLQVLRLYENRLSDIPMGTF--DALGNLQELALQENQI-GT 235
Query: 204 LSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTC 263
LS F N L+ LYLS N +S + ++ L L++L+L L L F
Sbjct: 236 LSPGLFHNNRNLQRLYLSNNHISHLPPGIFMQ-LPHLNKLTLFGNSLKELSPGVFGPMPN 294
Query: 264 LQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLE 323
L+EL + +N + S L L+ L + ++ L IS F +T+L+ L L N L+
Sbjct: 295 LRELWLYNNHITSLPDNAFSHLNQLQVLILSHNQLSYISPGAFNGLTNLRELSLHTNALQ 354
Query: 324 TLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLP 377
L+ +F++L +L + L N L +L ++F N L ++L N L LP
Sbjct: 355 DLDGNVFRSLANLRNVSLQNNRLRQLPGSIF-ANVN--GLMTIQLQNNNLENLP 405
Score = 212 (79.7 bits), Expect = 8.2e-14, P = 8.2e-14
Identities = 91/354 (25%), Positives = 150/354 (42%)
Query: 142 TLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLK 201
+L + + I+ LP++ F N + L L + +NEL ++ +NL L L L+N LK
Sbjct: 57 SLQILNTHITELPEDKFLNISALIALKMEKNELANIMPGAF--RNLGSLRHLSLANNKLK 114
Query: 202 GPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRF 261
L F + L TL LS N L + L L L L +P F
Sbjct: 115 N-LPVRLFQDVNNLETLLLSNNQLVQIQ-PAQFSQFSNLKELQLYGNNLEYIPEGVFDHL 172
Query: 262 TCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNK 321
L +L++ +N + L +L+ L + + L I TF + +L+ L L N+
Sbjct: 173 VGLTKLNLGNNGFTHLSPRVFQHLGNLQVLRLYENRLSDIPMGTFDALGNLQELALQENQ 232
Query: 322 LETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVL----- 376
+ TL GLF N +L L L+N ++ L +F + P L +L L GN L L
Sbjct: 233 IGTLSPGLFHNNRNLQRLYLSNNHISHLPPGIFMQ---LPHLNKLTLFGNSLKELSPGVF 289
Query: 377 ---PDSTKQY----SMRTIPTQIWKNFDFLVILFIL-NETVFHENYTY---PDLEELRLS 425
P+ + + + ++P + + + L +L + N+ + + +L EL L
Sbjct: 290 GPMPNLRELWLYNNHITSLPDNAFSHLNQLQVLILSHNQLSYISPGAFNGLTNLRELSLH 349
Query: 426 GNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNL 479
N L L GN ++ LP ++F N + ++ L NNNL
Sbjct: 350 TNALQDLD-GNVFRSLANLRNVSLQNN-RLRQLPGSIFANVNGLMTIQLQNNNL 401
Score = 201 (75.8 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 80/294 (27%), Positives = 131/294 (44%)
Query: 86 PLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDL 145
P ++ +LN ++T + F N++ L L++ +N+L + + NLG L L L
Sbjct: 52 PWNAMSLQILNT-HITELPEDKFLNISALIALKMEKNELANIMPGAF--RNLGSLRHLSL 108
Query: 146 RQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLS 205
+ + NLP +F + L L L+ N+L+ + A +L L L +L+ +
Sbjct: 109 ANNKLKNLPVRLFQDVNNLETLLLSNNQLVQIQPAQF--SQFSNLKELQLYGNNLEY-IP 165
Query: 206 EDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQ 265
E F + L L L N + V + L L L L LS +P TF LQ
Sbjct: 166 EGVFDHLVGLTKLNLGNNGFTHLSPRV-FQHLGNLQVLRLYENRLSDIPMGTFDALGNLQ 224
Query: 266 ELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETL 325
EL + N + L +L+ L + +++ + F+++ L L L GN L+ L
Sbjct: 225 ELALQENQIGTLSPGLFHNNRNLQRLYLSNNHISHLPPGIFMQLPHLNKLTLFGNSLKEL 284
Query: 326 ESGLFQNLTHLSVLELNNCGLTRLNETVF-HENYTYPDLEELRLSGNPL-HVLP 377
G+F + +L L L N +T L + F H N L+ L LS N L ++ P
Sbjct: 285 SPGVFGPMPNLRELWLYNNHITSLPDNAFSHLN----QLQVLILSHNQLSYISP 334
Score = 192 (72.6 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 101/420 (24%), Positives = 169/420 (40%)
Query: 186 NLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVAL-KPLTKLHRLS 244
N+ L +L + L + AF N LR L L+ N L +L V L + + L L
Sbjct: 75 NISALIALKMEKNELAN-IMPGAFRNLGSLRHLSLANNKLK--NLPVRLFQDVNNLETLL 131
Query: 245 LRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRS 304
L N L ++ F +F+ L+EL + N L + L L L++G + +S
Sbjct: 132 LSNNQLVQIQPAQFSQFSNLKELQLYGNNLEYIPEGVFDHLVGLTKLNLGNNGFTHLSPR 191
Query: 305 TFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLE 364
F + +L+ L L N+L + G F L +L L L + L+ +FH N +L+
Sbjct: 192 VFQHLGNLQVLRLYENRLSDIPMGTFDALGNLQELALQENQIGTLSPGLFHNNR---NLQ 248
Query: 365 ELRLSGNPL-HVLPDSTKQY-----------SMRTIPTQIWKNFDFLVILFILNE--TVF 410
L LS N + H+ P Q S++ + ++ L L++ N T
Sbjct: 249 RLYLSNNHISHLPPGIFMQLPHLNKLTLFGNSLKELSPGVFGPMPNLRELWLYNNHITSL 308
Query: 411 HEN-YTYPD-LEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRN 468
+N +++ + L+ L LS N L + G + D L NVF + N
Sbjct: 309 PDNAFSHLNQLQVLILSHNQLSYISPGAFNGLTNLRELSLHTNALQ-D-LDGNVFRSLAN 366
Query: 469 ITSLNLANNNLSMTSELSFQFXXXXXXXXXXXXXXXXXTHISPTVLRHNRAITSIKLVGN 528
+ +++L NN L +L ++ + H + ++L N
Sbjct: 367 LRNVSLQNNRLR---QLPGSIFANVNGLMTIQLQNNNLENLPLGIFDHLGNLCELRLYDN 423
Query: 529 PWKCDCNIADMWEWATREKGDIGVLVGSTTPTEIGFGASRKKKGLVCYFDIFTTPTRKRP 588
PW+CD NI + +W + +G T P AS + + LV F P+ + P
Sbjct: 424 PWRCDSNILPLHDWLILNRARLGT---DTLPV-CSSPASVRGQSLVIINVNFPGPSVQGP 479
Score = 139 (54.0 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 66/264 (25%), Positives = 105/264 (39%)
Query: 243 LSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRIS 302
L + N ++ LP + F + L L + N L + L SL HL + + L+ +
Sbjct: 58 LQILNTHITELPEDKFLNISALIALKMEKNELANIMPGAFRNLGSLRHLSLANNKLKNLP 117
Query: 303 RSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPD 362
F + +L+TL+LS N+L ++ F ++L L+L L + E VF
Sbjct: 118 VRLFQDVNNLETLLLSNNQLVQIQPAQFSQFSNLKELQLYGNNLEYIPEGVFDH---LVG 174
Query: 363 LEELRLSGNPL-HVLP---------DSTKQYSMRT--IPTQIWK---NFDFLVI----LF 403
L +L L N H+ P + Y R IP + N L + +
Sbjct: 175 LTKLNLGNNGFTHLSPRVFQHLGNLQVLRLYENRLSDIPMGTFDALGNLQELALQENQIG 234
Query: 404 ILNETVFHENYTYPDLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVF 463
L+ +FH N +L+ L LS N + LP G K L P VF
Sbjct: 235 TLSPGLFHNNR---NLQRLYLSNNHISHLPPGIFMQLPHLNKLTLFGNSLK--ELSPGVF 289
Query: 464 NNTRNITSLNLANNNLSMTSELSF 487
N+ L L NN+++ + +F
Sbjct: 290 GPMPNLRELWLYNNHITSLPDNAF 313
>UNIPROTKB|P35858 [details] [associations]
symbol:IGFALS "Insulin-like growth factor-binding protein
complex acid labile subunit" species:9606 "Homo sapiens"
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005576 "extracellular
region" evidence=NAS;TAS] [GO:0005520 "insulin-like growth factor
binding" evidence=TAS] [GO:0007165 "signal transduction"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005634 Reactome:REACT_116125 GO:GO:0007165
GO:GO:0005615 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007155 EMBL:M86826 EMBL:AF192554
EMBL:AK303146 EMBL:AC012180 EMBL:AL031724 IPI:IPI00020996
IPI:IPI00925635 PIR:A41915 RefSeq:NP_001139478.1 RefSeq:NP_004961.1
UniGene:Hs.839 ProteinModelPortal:P35858 SMR:P35858 STRING:P35858
DMDM:543800 PaxDb:P35858 PeptideAtlas:P35858 PRIDE:P35858
DNASU:3483 Ensembl:ENST00000215539 Ensembl:ENST00000415638
GeneID:3483 KEGG:hsa:3483 UCSC:uc002cmy.3 CTD:3483
GeneCards:GC16M001840 HGNC:HGNC:5468 HPA:HPA040692 HPA:HPA040948
MIM:601489 neXtProt:NX_P35858 Orphanet:140941 PharmGKB:PA29702
HOGENOM:HOG000033909 HOVERGEN:HBG000327 InParanoid:P35858
OMA:HLDRGCL OrthoDB:EOG4FFD1R PhylomeDB:P35858 GenomeRNAi:3483
NextBio:13696 ArrayExpress:P35858 Bgee:P35858 CleanEx:HS_IGFALS
Genevestigator:P35858 GermOnline:ENSG00000099769 GO:GO:0005520
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 Uniprot:P35858
Length = 605
Score = 309 (113.8 bits), Expect = 3.5e-25, Sum P(2) = 3.5e-25
Identities = 108/330 (32%), Positives = 162/330 (49%)
Query: 45 LYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYIS 104
L++ LS + P F NL++L L+L G L +EP L +L +L L R L ++
Sbjct: 79 LWLDGNNLSSVPPAAFQNLSSLGFLNLQGGQLGSLEPQALLGLENLCHLHLERNQLRSLA 138
Query: 105 PSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWL 164
F + L +L LS N+L S ++ L G LG L L+L + ++ LPD F L
Sbjct: 139 LGTFAHTPALASLGLSNNRL-SRLEDGLFEG-LGSLWDLNLGWNSLAVLPDAAFRGLGSL 196
Query: 165 RNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNP 224
R L LA N L L A G L L LDLS L+ + + FV +L+ LYL N
Sbjct: 197 RELVLAGNRLAYLQPALFSG--LAELRELDLSRNALRA-IKANVFVQLPRLQKLYLDRN- 252
Query: 225 LSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSP 284
L AA A L L L L + ++ L +TF L+ L +SHN +
Sbjct: 253 LIAAVAPGAFLGLKALRWLDLSHNRVAGLLEDTFPGLLGLRVLRLSHNAIASLRPRTFKD 312
Query: 285 LESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELN-N 343
L LE L +G++ +++++ +F + L+ L L N+L+ +++G F LT+++V+ L+ N
Sbjct: 313 LHFLEELQLGHNRIRQLAERSFEGLGQLEVLTLDHNQLQEVKAGAFLGLTNVAVMNLSGN 372
Query: 344 CGLTRLNETVFHENYTYPDLEELRLSGNPL 373
C L L E VF L L L G+ L
Sbjct: 373 C-LRNLPEQVFRG---LGKLHSLHLEGSCL 398
Score = 278 (102.9 bits), Expect = 1.3e-21, Sum P(2) = 1.3e-21
Identities = 116/369 (31%), Positives = 167/369 (45%)
Query: 22 INLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIE 80
+NL N + + + AF SL L + L+ + P F+ L L +LDLS N LR I+
Sbjct: 175 LNLGWNSLAVLPDAAFRGLGSLRELVLAGNRLAYLQPALFSGLAELRELDLSRNALRAIK 234
Query: 81 PGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKL 140
VF L L+ L L+R + ++P AF L L+ L+LS N++ ++ T G LG L
Sbjct: 235 ANVFVQLPRLQKLYLDRNLIAAVAPGAFLGLKALRWLDLSHNRVAGLLEDTFP-GLLG-L 292
Query: 141 DTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHL 200
L L + I++L F + +L L L N + L A + L L+ L L + L
Sbjct: 293 RVLRLSHNAIASLRPRTFKDLHFLEELQLGHNRIRQL--AERSFEGLGQLEVLTLDHNQL 350
Query: 201 KGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHR 260
+ + AF+ T + + LSGN L V + L KLH L L L R+ +TF
Sbjct: 351 Q-EVKAGAFLGLTNVAVMNLSGNCLRNLPEQV-FRGLGKLHSLHLEGSCLGRIRPHTFTG 408
Query: 261 FTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGN 320
+ L+ L + N L+ L L L LD+ + L + F + L+ L+LS N
Sbjct: 409 LSGLRRLFLKDNGLVGIEEQSLWGLAELLELDLTSNQLTHLPHRLFQGLGKLEYLLLSRN 468
Query: 321 KLETLES---GLFQNLTHLSV----LE-LNN---CGLTRLNETVFHENY--TY----PDL 363
+L L + G Q L V LE L N L RL N T+ P L
Sbjct: 469 RLAELPADALGPLQRAFWLDVSHNRLEALPNSLLAPLGRLRYLSLRNNSLRTFTPQPPGL 528
Query: 364 EELRLSGNP 372
E L L GNP
Sbjct: 529 ERLWLEGNP 537
Score = 251 (93.4 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
Identities = 104/367 (28%), Positives = 166/367 (45%)
Query: 12 RNLDNPGLITINLNANPIQPVEG-AFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLD 70
+NL + G + NL + +E A L +L +L+++ L + F + L L
Sbjct: 95 QNLSSLGFL--NLQGGQLGSLEPQALLGLENLCHLHLERNQLRSLALGTFAHTPALASLG 152
Query: 71 LSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDW 130
LS N L +E G+F+ L SL L L +L + +AF L L+ L L+ N+L +++
Sbjct: 153 LSNNRLSRLEDGLFEGLGSLWDLNLGWNSLAVLPDAAFRGLGSLRELVLAGNRL-AYLQP 211
Query: 131 TLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHL 190
L G L +L LDL ++ + + NVF L+ L L N + + LG L L
Sbjct: 212 ALFSG-LAELRELDLSRNALRAIKANVFVQLPRLQKLYLDRNLIAAVAPGAFLG--LKAL 268
Query: 191 DSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGL 250
LDLS+ + G L ED F LR L LS N +++ K L L L L + +
Sbjct: 269 RWLDLSHNRVAG-LLEDTFPGLLGLRVLRLSHNAIASLRPRT-FKDLHFLEELQLGHNRI 326
Query: 251 SRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMT 310
+L +F L+ L + HN L + L ++ +++ + L+ + F +
Sbjct: 327 RQLAERSFEGLGQLEVLTLDHNQLQEVKAGAFLGLTNVAVMNLSGNCLRNLPEQVFRGLG 386
Query: 311 SLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSG 370
L +L L G+ L + F L+ L L L + GL + E + +L EL L+
Sbjct: 387 KLHSLHLEGSCLGRIRPHTFTGLSGLRRLFLKDNGLVGIEEQSL---WGLAELLELDLTS 443
Query: 371 NPLHVLP 377
N L LP
Sbjct: 444 NQLTHLP 450
Score = 241 (89.9 bits), Expect = 1.8e-17, Sum P(2) = 1.8e-17
Identities = 97/332 (29%), Positives = 139/332 (41%)
Query: 24 LNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPG 82
L+ N + V AF SL +L +Q L + PQ L L L L N LR + G
Sbjct: 81 LDGNNLSSVPPAAFQNLSSLGFLNLQGGQLGSLEPQALLGLENLCHLHLERNQLRSLALG 140
Query: 83 VFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDT 142
F +L L L+ L+ + F+ L L L L N L D LG L
Sbjct: 141 TFAHTPALASLGLSNNRLSRLEDGLFEGLGSLWDLNLGWNSLAVLPD--AAFRGLGSLRE 198
Query: 143 LDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKG 202
L L + ++ L +F+ LR L+L+ N L + A Q L L L L +L
Sbjct: 199 LVLAGNRLAYLQPALFSGLAELRELDLSRNALRAIK-ANVFVQ-LPRLQKLYLDR-NLIA 255
Query: 203 PLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFT 262
++ AF+ LR L LS N ++ L L L L L + ++ L TF
Sbjct: 256 AVAPGAFLGLKALRWLDLSHNRVAGL-LEDTFPGLLGLRVLRLSHNAIASLRPRTFKDLH 314
Query: 263 CLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKL 322
L+EL + HN + L LE L + ++ LQ + FL +T++ + LSGN L
Sbjct: 315 FLEELQLGHNRIRQLAERSFEGLGQLEVLTLDHNQLQEVKAGAFLGLTNVAVMNLSGNCL 374
Query: 323 ETLESGLFQNLTHLSVLELNNCGLTRLNETVF 354
L +F+ L L L L L R+ F
Sbjct: 375 RNLPEQVFRGLGKLHSLHLEGSCLGRIRPHTF 406
Score = 170 (64.9 bits), Expect = 6.4e-10, Sum P(3) = 6.4e-10
Identities = 74/244 (30%), Positives = 109/244 (44%)
Query: 138 GKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLG-QNLVHLDSLDLS 196
G L L + +S++P F N + L LNL +L L+ LG +NL HL L
Sbjct: 74 GGTQALWLDGNNLSSVPPAAFQNLSSLGFLNLQGGQLGSLEPQALLGLENLCHLH---LE 130
Query: 197 NCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPAN 256
L+ L+ F + L +L LS N LS + + + L L L+L L+ LP
Sbjct: 131 RNQLRS-LALGTFAHTPALASLGLSNNRLSRLEDGL-FEGLGSLWDLNLGWNSLAVLPDA 188
Query: 257 TFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLI 316
F L+EL ++ N L AL S L L LD+ + L+ I + F+++ L+ L
Sbjct: 189 AFRGLGSLRELVLAGNRLAYLQPALFSGLAELRELDLSRNALRAIKANVFVQLPRLQKLY 248
Query: 317 LSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVL 376
L N + + G F L L L+L++ + L E F L LRLS N + L
Sbjct: 249 LDRNLIAAVAPGAFLGLKALRWLDLSHNRVAGLLEDTFPGLL---GLRVLRLSHNAIASL 305
Query: 377 PDST 380
T
Sbjct: 306 RPRT 309
Score = 144 (55.7 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 79/283 (27%), Positives = 120/283 (42%)
Query: 12 RNLDNPG-LITINLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKL 69
R+ + G L + L+ N +Q V+ GAFL ++ + + L + Q F L L+ L
Sbjct: 332 RSFEGLGQLEVLTLDHNQLQEVKAGAFLGLTNVAVMNLSGNCLRNLPEQVFRGLGKLHSL 391
Query: 70 DLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHID 129
L G+ L I P F L+ L L L L I + L L L+L+ N+L +H+
Sbjct: 392 HLEGSCLGRIRPHTFTGLSGLRRLFLKDNGLVGIEEQSLWGLAELLELDLTSNQL-THLP 450
Query: 130 WTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVH 189
L G LGKL+ L L ++ ++ LP + L+++ N L L +L L
Sbjct: 451 HRLFQG-LGKLEYLLLSRNRLAELPADALGPLQRAFWLDVSHNRLEALP--NSLLAPLGR 507
Query: 190 LDSLDLSNCHLKGPLSEDAFV-NATKLRTLYLSGNPLSA-----ADLSVALKPLTKLHRL 243
L L L N L+ F L L+L GNP A AL+ + + R
Sbjct: 508 LRYLSLRNNSLR------TFTPQPPGLERLWLEGNPWDCGCPLKALRDFALQNPSAVPRF 561
Query: 244 SLRNC-GLS-RLPANTFHRFTCLQELDISHNPLIDAFTALLSP 284
C G + PA T++ TC ++ L D A +P
Sbjct: 562 VQAICEGDDCQPPAYTYNNITCASPPEVVGLDLRDLSEAHFAP 604
Score = 51 (23.0 bits), Expect = 3.5e-25, Sum P(2) = 3.5e-25
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 525 LVGNPWKCDCNIADMWEWA 543
L GNPW C C + + ++A
Sbjct: 533 LEGNPWDCGCPLKALRDFA 551
Score = 44 (20.5 bits), Expect = 6.4e-10, Sum P(3) = 6.4e-10
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 458 LPPNVFNNTRNITSLNLANNNLSMTSELSFQ 488
L P F + + L L +N + +E SF+
Sbjct: 305 LRPRTFKDLHFLEELQLGHNRIRQLAERSFE 335
>UNIPROTKB|F1NI07 [details] [associations]
symbol:IGFALS "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005634 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GeneTree:ENSGT00690000101816 OMA:FCGLGEL
EMBL:AADN02049426 IPI:IPI00576764 Ensembl:ENSGALT00000003657
Uniprot:F1NI07
Length = 604
Score = 307 (113.1 bits), Expect = 3.0e-24, P = 3.0e-24
Identities = 115/375 (30%), Positives = 168/375 (44%)
Query: 2 WQGHPVYNDRRNLDNPGLITINLNANPIQPVEGA-FLVARSLLYLYMQECTLSKINPQFF 60
W V D+ D P L + L N + ++ F L L + L I F
Sbjct: 174 WNSLVVLPDKVFHDLPNLRELILAGNKLPYLQHQLFCSLTELKELDLSGNALKGIKINIF 233
Query: 61 TNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELS 120
L L KL L+ N + I P F + SL +L L+ LT + F L L L LS
Sbjct: 234 VKLQKLQKLYLNNNQINAIAPRAFMGMKSLRWLDLSHNRLTSLYEDTFLGLLSLHVLRLS 293
Query: 121 QNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVA 180
N + S T +L L+ L L + I +L + F L L+L N+L D+
Sbjct: 294 TNSITSLRPRTFK--DLQFLEELQLGHNRIWSLAERTFDGLGQLEVLSLNNNQLQDIKAG 351
Query: 181 TTLGQNLVHLDSLDLS-NCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTK 239
LG L ++ + LS NC +K L E F TKL +L+L + LS + LT
Sbjct: 352 AFLG--LYNVAVMHLSANC-IK-TLPEYVFEGVTKLHSLHLEHSCLSKIRANT-FSSLTS 406
Query: 240 LHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQ 299
L RL L++ +S + +F L ELD+ HN L L L +LE+L + ++ +
Sbjct: 407 LRRLFLQHNAISTIEDQSFRELHELLELDLKHNRLSHLSPQLFVGLSNLEYLFLSFNQIM 466
Query: 300 RISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYT 359
IS++TF + L L LS N+L TL++ + L +L L L N L + ++T
Sbjct: 467 DISQNTFSPLRRLFWLDLSHNQLATLDNAVITQLANLRYLSLRNNSLETFSVGFLCPSFT 526
Query: 360 YPDLEELRLSGNPLH 374
LE+L L GN H
Sbjct: 527 ---LEQLWLGGNNWH 538
Score = 302 (111.4 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 106/322 (32%), Positives = 161/322 (50%)
Query: 60 FTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLEL 119
F NL+ L+ LDL + L +E F L SL +L L R L Y++P F + +L +L L
Sbjct: 89 FRNLSGLDFLDLQSSQLAAVEQHAFHGLRSLYHLHLERNRLKYLAPHTFLHTQNLVSLSL 148
Query: 120 SQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDV 179
+ N L S ++ L G L L L+L + + LPD VF + LR L LA N+L L
Sbjct: 149 NNN-LFSKVEEGLFAG-LSNLWYLNLGWNSLVVLPDKVFHDLPNLRELILAGNKLPYLQ- 205
Query: 180 ATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTK 239
L +L L LDLS LKG + + FV KL+ LYL+ N ++A A +
Sbjct: 206 -HQLFCSLTELKELDLSGNALKG-IKINIFVKLQKLQKLYLNNNQINAI-APRAFMGMKS 262
Query: 240 LHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQ 299
L L L + L+ L +TF L L +S N + L+ LE L +G++ +
Sbjct: 263 LRWLDLSHNRLTSLYEDTFLGLLSLHVLRLSTNSITSLRPRTFKDLQFLEELQLGHNRIW 322
Query: 300 RISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELN-NCGLTRLNETVFHENY 358
++ TF + L+ L L+ N+L+ +++G F L +++V+ L+ NC + L E VF E
Sbjct: 323 SLAERTFDGLGQLEVLSLNNNQLQDIKAGAFLGLYNVAVMHLSANC-IKTLPEYVF-EGV 380
Query: 359 TYPDLEELRLSGNPLHVLPDST 380
T L L L + L + +T
Sbjct: 381 T--KLHSLHLEHSCLSKIRANT 400
Score = 267 (99.0 bits), Expect = 8.1e-20, P = 8.1e-20
Identities = 126/501 (25%), Positives = 206/501 (41%)
Query: 64 TTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNK 123
T + L GN + F L+ L++L L L + AF L L L L +N+
Sbjct: 69 TNAKAIWLDGNNFTQLPAAAFRNLSGLDFLDLQSSQLAAVEQHAFHGLRSLYHLHLERNR 128
Query: 124 LKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFA--NNTWLRNLNLAENELIDLDVAT 181
LK T + + L +L L + S + + +FA +N W LNL N L+ L
Sbjct: 129 LKYLAPHTFL--HTQNLVSLSLNNNLFSKVEEGLFAGLSNLWY--LNLGWNSLVVLP--D 182
Query: 182 TLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLH 241
+ +L +L L L+ L L F + T+L+ L LSGN L +++ +K L KL
Sbjct: 183 KVFHDLPNLRELILAGNKLPY-LQHQLFCSLTELKELDLSGNALKGIKINIFVK-LQKLQ 240
Query: 242 RLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRI 301
+L L N ++ + F L+ LD+SHN L + L SL L + +++ +
Sbjct: 241 KLYLNNNQINAIAPRAFMGMKSLRWLDLSHNRLTSLYEDTFLGLLSLHVLRLSTNSITSL 300
Query: 302 SRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYP 361
TF + L+ L L N++ +L F L L VL LNN L + F Y
Sbjct: 301 RPRTFKDLQFLEELQLGHNRIWSLAERTFDGLGQLEVLSLNNNQLQDIKAGAFLGLY--- 357
Query: 362 DLEELRLSGNPLHVLPDS-----TKQYSMRT-------IPTQIWKNFDFLVILFILNETV 409
++ + LS N + LP+ TK +S+ I + + L LF+ + +
Sbjct: 358 NVAVMHLSANCIKTLPEYVFEGVTKLHSLHLEHSCLSKIRANTFSSLTSLRRLFLQHNAI 417
Query: 410 FH-ENYTYPDLEELR---LSGNPL-HVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFN 464
E+ ++ +L EL L N L H+ P +I + N F+
Sbjct: 418 STIEDQSFRELHELLELDLKHNRLSHLSPQ---LFVGLSNLEYLFLSFNQIMDISQNTFS 474
Query: 465 NTRNITSLNLANNNLSMTSELSFQFXXXXXXXXXXXXXXXXXTHISPTVLRHNRAITSIK 524
R + L+L++N L+ L S L + + +
Sbjct: 475 PLRRLFWLDLSHNQLAT---LDNAVITQLANLRYLSLRNNSLETFSVGFLCPSFTLEQLW 531
Query: 525 LVGNPWKCDCNIADMWEWATR 545
L GN W C+C++ + ++A R
Sbjct: 532 LGGNNWHCNCSLKGLRDFALR 552
Score = 260 (96.6 bits), Expect = 4.8e-19, P = 4.8e-19
Identities = 102/368 (27%), Positives = 170/368 (46%)
Query: 12 RNLDNPGLITINLNANPIQPVEG-AFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLD 70
RNL GL ++L ++ + VE AF RSL +L+++ L + P F + L L
Sbjct: 90 RNLS--GLDFLDLQSSQLAAVEQHAFHGLRSLYHLHLERNRLKYLAPHTFLHTQNLVSLS 147
Query: 71 LSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDW 130
L+ N +E G+F L++L YL L +L + F +L +L+ L L+ NKL ++
Sbjct: 148 LNNNLFSKVEEGLFAGLSNLWYLNLGWNSLVVLPDKVFHDLPNLRELILAGNKLP-YLQH 206
Query: 131 TLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHL 190
L +L +L LDL + + + N+F L+ L L N++ + +G L
Sbjct: 207 QLFC-SLTELKELDLSGNALKGIKINIFVKLQKLQKLYLNNNQINAIAPRAFMGMK--SL 263
Query: 191 DSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGL 250
LDLS+ L L ED F+ L L LS N +++ K L L L L + +
Sbjct: 264 RWLDLSHNRLTS-LYEDTFLGLLSLHVLRLSTNSITSLRPRT-FKDLQFLEELQLGHNRI 321
Query: 251 SRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMT 310
L TF L+ L +++N L D L ++ + + + ++ + F +T
Sbjct: 322 WSLAERTFDGLGQLEVLSLNNNQLQDIKAGAFLGLYNVAVMHLSANCIKTLPEYVFEGVT 381
Query: 311 SLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSG 370
L +L L + L + + F +LT L L L + ++ + + F E + +L EL L
Sbjct: 382 KLHSLHLEHSCLSKIRANTFSSLTSLRRLFLQHNAISTIEDQSFRELH---ELLELDLKH 438
Query: 371 NPL-HVLP 377
N L H+ P
Sbjct: 439 NRLSHLSP 446
Score = 250 (93.1 bits), Expect = 6.1e-18, P = 6.1e-18
Identities = 103/346 (29%), Positives = 156/346 (45%)
Query: 36 FLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLML 95
FL ++L+ L + SK+ F L+ L L+L N L ++ VF L +L L+L
Sbjct: 137 FLHTQNLVSLSLNNNLFSKVEEGLFAGLSNLWYLNLGWNSLVVLPDKVFHDLPNLRELIL 196
Query: 96 NRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPD 155
L Y+ F +L LK L+LS N LK I + + L KL L L + I+ +
Sbjct: 197 AGNKLPYLQHQLFCSLTELKELDLSGNALKG-IKINIFV-KLQKLQKLYLNNNQINAIAP 254
Query: 156 NVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKL 215
F LR L+L+ N L L T LG L+ L L LS + L F + L
Sbjct: 255 RAFMGMKSLRWLDLSHNRLTSLYEDTFLG--LLSLHVLRLSTNSITS-LRPRTFKDLQFL 311
Query: 216 RTLYLSGNPL-SAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPL 274
L L N + S A+ + L +L LSL N L + A F + + +S N +
Sbjct: 312 EELQLGHNRIWSLAERT--FDGLGQLEVLSLNNNQLQDIKAGAFLGLYNVAVMHLSANCI 369
Query: 275 IDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLT 334
+ + L L + +S L +I +TF +TSL+ L L N + T+E F+ L
Sbjct: 370 KTLPEYVFEGVTKLHSLHLEHSCLSKIRANTFSSLTSLRRLFLQHNAISTIEDQSFRELH 429
Query: 335 HLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDST 380
L L+L + L+ L+ +F +LE L LS N + + +T
Sbjct: 430 ELLELDLKHNRLSHLSPQLF---VGLSNLEYLFLSFNQIMDISQNT 472
>WB|WBGene00022129 [details] [associations]
symbol:lron-11 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 SMART:SM00013 InterPro:IPR025875 Pfam:PF12799
GeneTree:ENSGT00700000104286 HSSP:P07359 EMBL:FO081276
EMBL:AF304125 RefSeq:NP_491035.1 UniGene:Cel.7069
ProteinModelPortal:G5EGE7 SMR:G5EGE7 EnsemblMetazoa:Y71F9B.8
GeneID:171837 KEGG:cel:CELE_Y71F9B.8 CTD:171837 WormBase:Y71F9B.8
OMA:AFVDNIN NextBio:872913 Uniprot:G5EGE7
Length = 542
Score = 296 (109.3 bits), Expect = 8.5e-24, Sum P(2) = 8.5e-24
Identities = 95/324 (29%), Positives = 162/324 (50%)
Query: 52 LSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNL 111
+S+++ + L +L L N + + VF L SL L L+ +L + F L
Sbjct: 58 ISRLSADELSLYPNLEQLILHNNSITHLSADVFSTLPSLRVLDLSSNSLLSLPNEVFSKL 117
Query: 112 NHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAE 171
+LKTL +S N ++ + L +L TL + + +S LP +V + LRNL+L+
Sbjct: 118 KNLKTLIISSNDVQLGPE---CFAGLSQLQTLSIADNRLSFLPPSVLKPLSGLRNLDLSA 174
Query: 172 NELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLS 231
N+L+ + + NL L++L L +L L F++ +L+ L +S N + +
Sbjct: 175 NKLLSMPASVM--NNLGGLETLKLKQ-NLLSSLETGMFLSQKELKHLDVSENLIGDIEEG 231
Query: 232 VALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHL 291
AL L KL L+L N L RLP NT+ L+ LD+S N + TA L +L++L
Sbjct: 232 -ALYGLEKLETLNLTNNQLVRLPGNTWS-LPALKTLDLSSNLFVSLETASFDGLPALQYL 289
Query: 292 DMGYS-NLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLN 350
++ +S NL+ I +TF++++SL L +S + L + F + LS L+L+N L +
Sbjct: 290 NISHSRNLKTIQMATFVQLSSLHWLSISSSALTHIHPSAFNPIPPLSHLDLSNNELRYVA 349
Query: 351 ETVFHENYTYPDLEELRLSGNPLH 374
+ +P++ L L+ N H
Sbjct: 350 PGMLQ----WPNIRNLHLANNDWH 369
Score = 250 (93.1 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
Identities = 98/325 (30%), Positives = 151/325 (46%)
Query: 16 NPGLITINLNANPIQPVEGAFL-VARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGN 74
+P ++L+ N I + L + +L L + +++ ++ F+ L +L LDLS N
Sbjct: 45 DPRTTVLDLSNNRISRLSADELSLYPNLEQLILHNNSITHLSADVFSTLPSLRVLDLSSN 104
Query: 75 PLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVL 134
L + VF L +L+ L+++ N + P F L+ L+TL ++ N+L S + + VL
Sbjct: 105 SLLSLPNEVFSKLKNLKTLIISS-NDVQLGPECFAGLSQLQTLSIADNRL-SFLPPS-VL 161
Query: 135 GNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLD 194
L L LDL + + ++P +V N L L L +N L L+ L Q L LD
Sbjct: 162 KPLSGLRNLDLSANKLLSMPASVMNNLGGLETLKLKQNLLSSLETGMFLSQK--ELKHLD 219
Query: 195 LSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLP 254
+S +L G + E A KL TL L+ N L + P K LS N +S L
Sbjct: 220 VSE-NLIGDIEEGALYGLEKLETLNLTNNQLVRLPGNTWSLPALKTLDLS-SNLFVS-LE 276
Query: 255 ANTFHRFTCLQELDISHNPLIDAFT-ALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLK 313
+F LQ L+ISH+ + A L SL L + S L I S F + L
Sbjct: 277 TASFDGLPALQYLNISHSRNLKTIQMATFVQLSSLHWLSISSSALTHIHPSAFNPIPPLS 336
Query: 314 TLILSGNKLETLESGLFQ--NLTHL 336
L LS N+L + G+ Q N+ +L
Sbjct: 337 HLDLSNNELRYVAPGMLQWPNIRNL 361
Score = 208 (78.3 bits), Expect = 8.9e-14, Sum P(2) = 8.9e-14
Identities = 87/323 (26%), Positives = 154/323 (47%)
Query: 69 LDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHI 128
LDLS N + + +LE L+L+ ++T++S F L L+ L+LS N L S
Sbjct: 51 LDLSNNRISRLSADELSLYPNLEQLILHNNSITHLSADVFSTLPSLRVLDLSSNSLLSLP 110
Query: 129 DWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLV 188
+ V L L TL + + + P+ FA + L+ L++A+N L L + + L
Sbjct: 111 NE--VFSKLKNLKTLIISSNDVQLGPE-CFAGLSQLQTLSIADNRLSFLPPSVL--KPLS 165
Query: 189 HLDSLDLS-NCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRN 247
L +LDLS N L P S N L TL L N LS+ + + L +L L +
Sbjct: 166 GLRNLDLSANKLLSMPAS--VMNNLGGLETLKLKQNLLSSLETGMFLSQ-KELKHLDVSE 222
Query: 248 CGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFL 307
+ + + L+ L++++N L+ S L +L+ LD+ + + ++F
Sbjct: 223 NLIGDIEEGALYGLEKLETLNLTNNQLVRLPGNTWS-LPALKTLDLSSNLFVSLETASFD 281
Query: 308 KMTSLKTLILSGNK-LETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEEL 366
+ +L+ L +S ++ L+T++ F L+ L L +++ LT ++ + F+ P L L
Sbjct: 282 GLPALQYLNISHSRNLKTIQMATFVQLSSLHWLSISSSALTHIHPSAFNP---IPPLSHL 338
Query: 367 RLSGNPL-HVLPDSTKQYSMRTI 388
LS N L +V P + ++R +
Sbjct: 339 DLSNNELRYVAPGMLQWPNIRNL 361
Score = 186 (70.5 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 95/346 (27%), Positives = 145/346 (41%)
Query: 143 LDLRQSGISNLPDNVFANNTWLRNLNLAENELIDL--DVATTLGQNLVHLDSLDLSNCHL 200
LDL + IS L + + L L L N + L DV +TL L LDLS+ L
Sbjct: 51 LDLSNNRISRLSADELSLYPNLEQLILHNNSITHLSADVFSTLPS----LRVLDLSSNSL 106
Query: 201 KGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHR 260
L + F L+TL +S N + A L++L LS+ + LS LP +
Sbjct: 107 LS-LPNEVFSKLKNLKTLIISSNDVQLGPECFA--GLSQLQTLSIADNRLSFLPPSVLKP 163
Query: 261 FTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGN 320
+ L+ LD+S N L+ ++++ L LE L + + L + FL LK L +S N
Sbjct: 164 LSGLRNLDLSANKLLSMPASVMNNLGGLETLKLKQNLLSSLETGMFLSQKELKHLDVSEN 223
Query: 321 KLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDST 380
+ +E G L L L L N L RL ++ P L+ L LS N L V S
Sbjct: 224 LIGDIEEGALYGLEKLETLNLTNNQLVRLPGNT----WSLPALKTLDLSSN-LFV---SL 275
Query: 381 KQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTYPDLEELRLSGNPL-HVLPTGNXXX 439
+ S +P + N L + F + L L +S + L H+ P+
Sbjct: 276 ETASFDGLPALQYLNISHSRNLKTIQMATFVQ---LSSLHWLSISSSALTHIHPSAFNPI 332
Query: 440 XXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNLSMTSEL 485
++ Y+ P + NI +L+LANN+ + +L
Sbjct: 333 PPLSHLDLSNN---ELRYVAPGMLQ-WPNIRNLHLANNDWHCSCDL 374
Score = 122 (48.0 bits), Expect = 0.00049, P = 0.00049
Identities = 54/188 (28%), Positives = 83/188 (44%)
Query: 19 LITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLS-GNPLR 77
L T+NL N + + G +L L + + F L L L++S L+
Sbjct: 239 LETLNLTNNQLVRLPGNTWSLPALKTLDLSSNLFVSLETASFDGLPALQYLNISHSRNLK 298
Query: 78 IIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNL 137
I+ F L+SL +L ++ LT+I PSAF+ + L L+LS N+L+ V +
Sbjct: 299 TIQMATFVQLSSLHWLSISSSALTHIHPSAFNPIPPLSHLDLSNNELR------YVAPGM 352
Query: 138 GKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLG-QNLVHLDSLDLS 196
L+ I NL ANN W + +L + L D A G +NL +LS
Sbjct: 353 -------LQWPNIRNLH---LANNDWHCSCDLRVSNLNPRDDAKCSGPENLAGAPINELS 402
Query: 197 NCHLKGPL 204
+C + G L
Sbjct: 403 SCSILGGL 410
Score = 49 (22.3 bits), Expect = 8.5e-24, Sum P(2) = 8.5e-24
Identities = 8/29 (27%), Positives = 17/29 (58%)
Query: 508 HISPTVLRHNRAITSIKLVGNPWKCDCNI 536
+++P +L+ I ++ L N W C C++
Sbjct: 347 YVAPGMLQWPN-IRNLHLANNDWHCSCDL 374
>FB|FBgn0028888 [details] [associations]
symbol:CG4168 species:7227 "Drosophila melanogaster"
[GO:0004930 "G-protein coupled receptor activity" evidence=ISS]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 EMBL:AE014134
InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875 Pfam:PF12799
HSSP:Q9BZR6 FlyBase:FBgn0028888 RefSeq:NP_609740.4
ProteinModelPortal:Q9VJQ0 SMR:Q9VJQ0 IntAct:Q9VJQ0 MINT:MINT-294601
GeneID:34889 KEGG:dme:Dmel_CG4168 UCSC:CG4168-RA InParanoid:Q9VJQ0
PhylomeDB:Q9VJQ0 GenomeRNAi:34889 NextBio:790724
ArrayExpress:Q9VJQ0 Bgee:Q9VJQ0 Uniprot:Q9VJQ0
Length = 1443
Score = 313 (115.2 bits), Expect = 3.2e-23, Sum P(2) = 3.2e-23
Identities = 135/493 (27%), Positives = 220/493 (44%)
Query: 11 RRNLDNPGLITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLT-TLNKL 69
++N + L +NL N + + A A + +L + +S+++P F LT TL L
Sbjct: 471 QQNYSDVHLRALNLEQNFVTQLPEAVFKATGIAHLVLAFNAISRVHPSAFEGLTETLEYL 530
Query: 70 DLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYIS--PSAFDNLNHLKTLELSQNKLKSH 127
DL N L + P L L+YL L ++ ++ PS +NL + L LS N S
Sbjct: 531 DLERNRLTTV-PVALSSLHHLKYLYLTSNQISQLNNLPSFTENL---RVLSLSGNNF-SM 585
Query: 128 IDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLN---LAENELIDLDVATTLG 184
I L L N +L L++ + I+++P+ +FA ++W NL L N++ L + + G
Sbjct: 586 IP-VLGLKNYTQLSYLNMGYNSITDIPEGIFAVDSWGSNLQTILLRNNKITHLHLGSFAG 644
Query: 185 QNLVHLDSLDLSNCHLKGPLSEDAFVNATK-LRTLYLS-----GNPLSAADLSVALKPLT 238
+ SL ++ + PL F N ++ L+ L LS L + D AL PL+
Sbjct: 645 LEQIQEISLSFNDITIHHPL---VFENVSRTLKILELSFAVFPARSLESLDPLDALLPLS 701
Query: 239 KLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALL-SPLES-LEHLDMGYS 296
+L L L N L ++ +F + L +++S N L L S S L +D+ Y+
Sbjct: 702 QLIWLGLDNNNLKQVSNESFAQMRELSYINLSFNQLKTLPRGLFQSDAHSHLVEIDLSYN 761
Query: 297 NLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHE 356
L+R+ TF + L+TL L N+L T+ F NL L L+L+ L ++ F
Sbjct: 762 GLERLEAQTFHSLGDLQTLNLQSNRLRTIARHAFHNLEFLRYLDLSYNRLVNISHGAFT- 820
Query: 357 NYTYPDLEELRLSGNPLHVLPDSTKQY-SMRTIPTQIWKNFDFLVILFILNETVFHENYT 415
P+L L L N L L + Y S T P ++ N I +E +Y
Sbjct: 821 --VLPNLAALDLMHNQLCSLSLKSFLYVSNTTTPLRL--NVSHNHIASFYDEL---SSYM 873
Query: 416 YPDLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLA 475
Y + +L +S N HV + + ++ L + F + + LN+A
Sbjct: 874 Y--IYQLDISHN--HVTKSDSFTNLANTLRFLNLAHN-QLGSLQSHAFGDLEFLEILNVA 928
Query: 476 NNNLSMTSELSFQ 488
+NNL+ SFQ
Sbjct: 929 HNNLTSLRRRSFQ 941
Score = 243 (90.6 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 97/368 (26%), Positives = 174/368 (47%)
Query: 51 TLSKINP-QFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAF- 108
+L ++P L+ L L L N L+ + F + L Y+ L+ L + F
Sbjct: 687 SLESLDPLDALLPLSQLIWLGLDNNNLKQVSNESFAQMRELSYINLSFNQLKTLPRGLFQ 746
Query: 109 -DNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNL 167
D +HL ++LS N L+ ++ +LG L TL+L+ + + + + F N +LR L
Sbjct: 747 SDAHSHLVEIDLSYNGLE-RLE-AQTFHSLGDLQTLNLQSNRLRTIARHAFHNLEFLRYL 804
Query: 168 NLAENELIDLDV-ATTLGQNLVHLDSLDLSNCHLKGPLSEDAFV-NATKLRTLYLSGNPL 225
+L+ N L+++ A T+ NL LD + C L L +V N T L +S N +
Sbjct: 805 DLSYNRLVNISHGAFTVLPNLAALDLMHNQLCSLS--LKSFLYVSNTTTPLRLNVSHNHI 862
Query: 226 SAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPL 285
A L +++L + + +++ + T + L+ L+++HN L + L
Sbjct: 863 --ASFYDELSSYMYIYQLDISHNHVTKSDSFT-NLANTLRFLNLAHNQLGSLQSHAFGDL 919
Query: 286 ESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCG 345
E LE L++ ++NL + R +F + SL+ L LS N+L+ L+ F NL L +L +N+
Sbjct: 920 EFLEILNVAHNNLTSLRRRSFQGLNSLQELDLSHNQLDQLQVEQFSNLRKLRILRINSNR 979
Query: 346 LTRLNETVF-HENYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFI 404
L L VF + + D+ E +LS P+ D +++R+I N ++L
Sbjct: 980 LRALPREVFMNTRLEFLDIAENQLSVWPVPAFTDIG--FTLRSIQMS-HNNLEYLDASMF 1036
Query: 405 LNETVFHE 412
+N ++
Sbjct: 1037 INSQFLYD 1044
Score = 239 (89.2 bits), Expect = 4.0e-15, Sum P(2) = 4.0e-15
Identities = 113/371 (30%), Positives = 170/371 (45%)
Query: 19 LITINLNANPIQPVEG-AFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLR 77
L+ I+L+ N ++ +E F L L +Q L I F NL L LDLS N L
Sbjct: 753 LVEIDLSYNGLERLEAQTFHSLGDLQTLNLQSNRLRTIARHAFHNLEFLRYLDLSYNRLV 812
Query: 78 IIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKT---LELSQNKLKSHIDWTLVL 134
I G F L +L L L L +S +F +++ T L +S N + S D L
Sbjct: 813 NISHGAFTVLPNLAALDLMHNQLCSLSLKSFLYVSNTTTPLRLNVSHNHIASFYD---EL 869
Query: 135 GNLGKLDTLDLRQSGISNLPDNVFAN--NTWLRNLNLAENELIDLDVATTLGQNLVHLDS 192
+ + LD+ + ++ + F N NT LR LNLA N+L L + G +L L+
Sbjct: 870 SSYMYIYQLDISHNHVTK--SDSFTNLANT-LRFLNLAHNQLGSLQ-SHAFG-DLEFLEI 924
Query: 193 LDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSR 252
L++++ +L L +F L+ L LS N L + L KL L + + L
Sbjct: 925 LNVAHNNLTS-LRRRSFQGLNSLQELDLSHNQLDQLQVE-QFSNLRKLRILRINSNRLRA 982
Query: 253 LPANTFHRFTCLQELDISHNPL----IDAFTALLSPLESLEHLDMGYSNLQRISRSTFLK 308
LP F T L+ LDI+ N L + AFT + L S++ M ++NL+ + S F+
Sbjct: 983 LPREVFMN-TRLEFLDIAENQLSVWPVPAFTDIGFTLRSIQ---MSHNNLEYLDASMFIN 1038
Query: 309 MTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGL--TRLNETVFHENYTYPDLEEL 366
L + L+ N++ L F L +L+ L+L+ L T L E H P L +L
Sbjct: 1039 SQFLYDISLARNRITILPDNTFSFLNNLTNLDLSQNPLVTTNLREVFVHT----PRLRKL 1094
Query: 367 RLSGNPLHVLP 377
L L+VLP
Sbjct: 1095 SLHHMGLYVLP 1105
Score = 219 (82.2 bits), Expect = 5.8e-13, Sum P(2) = 5.8e-13
Identities = 119/439 (27%), Positives = 184/439 (41%)
Query: 60 FTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLEL 119
F L L LDLS N + + G + P SL + L+ LT F+ L L+ + L
Sbjct: 373 FEQLQKLLWLDLSNNRIYHVA-GNYLP-RSLVTMDLSSNLLTVFPQQLFEQLPELRIVSL 430
Query: 120 SQNKLKSHIDWT-LVLGNLGK-LDTLDLRQSGISNLPDNVFANN---TWLRNLNLAENEL 174
N ++S + W L + L L+ LDL Q+ I NL + F N LR LNL +N +
Sbjct: 431 RDNLIRS-VQWKELQVRPLRMHLERLDLGQNCIENLESDYFQQNYSDVHLRALNLEQNFV 489
Query: 175 IDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATK-LRTLYLSGNPLSAADLSVA 233
L A + HL L + P AF T+ L L L N L+ + VA
Sbjct: 490 TQLPEAVFKATGIAHL-VLAFNAISRVHP---SAFEGLTETLEYLDLERNRLTT--VPVA 543
Query: 234 LKPLTKLHRLSLRNCGLSRLPANTFHRFT-CLQELDISHNPLIDAFTALLSPLESLEHLD 292
L L L L L + +S+L N FT L+ L +S N L L +L+
Sbjct: 544 LSSLHHLKYLYLTSNQISQL--NNLPSFTENLRVLSLSGNNFSMIPVLGLKNYTQLSYLN 601
Query: 293 MGYSNLQRISRSTFLKMT---SLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRL 349
MGY+++ I F + +L+T++L NK+ L G F L + + L+ +T
Sbjct: 602 MGYNSITDIPEGIFAVDSWGSNLQTILLRNNKITHLHLGSFAGLEQIQEISLSFNDITIH 661
Query: 350 NETVFHENYTYP-DLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNET 408
+ VF EN + + EL + P L ++ + IW D + + NE+
Sbjct: 662 HPLVF-ENVSRTLKILELSFAVFPARSLESLDPLDALLPLSQLIWLGLDNNNLKQVSNES 720
Query: 409 VFHENYTYPDLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRN 468
F + +L + LS N L LP G ++ L F++ +
Sbjct: 721 -FAQ---MRELSYINLSFNQLKTLPRGLFQSDAHSHLVEIDLSYNGLERLEAQTFHSLGD 776
Query: 469 ITSLNLANNNLSMTSELSF 487
+ +LNL +N L + +F
Sbjct: 777 LQTLNLQSNRLRTIARHAF 795
Score = 213 (80.0 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 88/355 (24%), Positives = 159/355 (44%)
Query: 29 IQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVF--DP 86
+ P++ A L L++L + L +++ + F + L+ ++LS N L+ + G+F D
Sbjct: 691 LDPLD-ALLPLSQLIWLGLDNNNLKQVSNESFAQMRELSYINLSFNQLKTLPRGLFQSDA 749
Query: 87 LTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLR 146
+ L + L+ L + F +L L+TL L N+L++ NL L LDL
Sbjct: 750 HSHLVEIDLSYNGLERLEAQTFHSLGDLQTLNLQSNRLRTIARHAF--HNLEFLRYLDLS 807
Query: 147 QSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLG-QNLVHLDSLDLSNCHLKGPLS 205
+ + N+ F L L+L N+L L + + L N L++S+ H+
Sbjct: 808 YNRLVNISHGAFTVLPNLAALDLMHNQLCSLSLKSFLYVSNTTTPLRLNVSHNHIAS--F 865
Query: 206 EDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQ 265
D + + L +S N ++ +D L L L+L + L L ++ F L+
Sbjct: 866 YDELSSYMYIYQLDISHNHVTKSDSFTNLA--NTLRFLNLAHNQLGSLQSHAFGDLEFLE 923
Query: 266 ELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETL 325
L+++HN L L SL+ LD+ ++ L ++ F + L+ L ++ N+L L
Sbjct: 924 ILNVAHNNLTSLRRRSFQGLNSLQELDLSHNQLDQLQVEQFSNLRKLRILRINSNRLRAL 983
Query: 326 ESGLFQNLTHLSVLELNNCGLTRLNETVFHE-NYTYPDLEELRLSGNPLHVLPDS 379
+F N T L L++ L+ F + +T L +++S N L L S
Sbjct: 984 PREVFMN-TRLEFLDIAENQLSVWPVPAFTDIGFT---LRSIQMSHNNLEYLDAS 1034
Score = 207 (77.9 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 83/330 (25%), Positives = 152/330 (46%)
Query: 22 INLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEP 81
++++ N + + +A +L +L + L + F +L L L+++ N L +
Sbjct: 878 LDISHNHVTKSDSFTNLANTLRFLNLAHNQLGSLQSHAFGDLEFLEILNVAHNNLTSLRR 937
Query: 82 GVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLD 141
F L SL+ L L+ L + F NL L+ L ++ N+L++ + + + +L+
Sbjct: 938 RSFQGLNSLQELDLSHNQLDQLQVEQFSNLRKLRILRINSNRLRA-LPREVFMNT--RLE 994
Query: 142 TLDLRQSGISNLPDNVFANNTW-LRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHL 200
LD+ ++ +S P F + + LR++ ++ N L LD + + ++ SL + +
Sbjct: 995 FLDIAENQLSVWPVPAFTDIGFTLRSIQMSHNNLEYLDASMFINSQFLYDISLARNRITI 1054
Query: 201 KGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHR 260
L ++ F L L LS NPL +L +L +LSL + GL LP +
Sbjct: 1055 ---LPDNTFSFLNNLTNLDLSQNPLVTTNLREVFVHTPRLRKLSLHHMGLYVLPPL---K 1108
Query: 261 FTCLQELDISHNPLIDAFTALLSPLESLEHL---DMGYSNLQRISRSTFLKMTSLKTLIL 317
L LD+S N L + LSPL SL HL ++ ++ L S + S++ L L
Sbjct: 1109 LPLLSYLDVSGNYLQE-----LSPLGSLRHLRHVNVSHNKLTNASCAAEHLPPSVRVLDL 1163
Query: 318 SGNKLETLESGLFQNLTHLSVLELNNCGLT 347
+ N L + +L HL+ L + + +T
Sbjct: 1164 AHNPLRRITLHDLASLRHLAELNILDVKVT 1193
Score = 187 (70.9 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 120/470 (25%), Positives = 204/470 (43%)
Query: 41 SLLYLYMQECTLSKINPQ-FFTNLT-TLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRC 98
S +Y+Y + + + + FTNL TL L+L+ N L ++ F L LE L +
Sbjct: 871 SYMYIYQLDISHNHVTKSDSFTNLANTLRFLNLAHNQLGSLQSHAFGDLEFLEILNVAHN 930
Query: 99 NLTYISPSAFDNLNHLKTLELSQNKLKS-HIDWTLVLGNLGKLDTLDLRQSGISNLPDNV 157
NLT + +F LN L+ L+LS N+L ++ NL KL L + + + LP V
Sbjct: 931 NLTSLRRRSFQGLNSLQELDLSHNQLDQLQVEQ---FSNLRKLRILRINSNRLRALPREV 987
Query: 158 FANNTWLRNLNLAENELIDLDVA--TTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKL 215
F N T L L++AEN+L V T +G L S+ +S+ +L+ L F+N+ L
Sbjct: 988 FMN-TRLEFLDIAENQLSVWPVPAFTDIGFTL---RSIQMSHNNLEY-LDASMFINSQFL 1042
Query: 216 RTLYLSGNPLSAA-DLSVA-LKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNP 273
+ L+ N ++ D + + L LT L LS + L F L++L + H
Sbjct: 1043 YDISLARNRITILPDNTFSFLNNLTNLD-LSQNPLVTTNL-REVFVHTPRLRKLSLHHMG 1100
Query: 274 LIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNL 333
L L PL L +LD+ + LQ +S L+ L+ + +S NKL T S ++L
Sbjct: 1101 LY-VLPPLKLPL--LSYLDVSGNYLQELSPLGSLR--HLRHVNVSHNKL-TNASCAAEHL 1154
Query: 334 T-HLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQI 392
+ VL+L + L R+ H+ + L EL + + +K S+R +
Sbjct: 1155 PPSVRVLDLAHNPLRRIT---LHDLASLRHLAELNILDVKVTNPQAFSKLRSLRKLHASS 1211
Query: 393 WKNFDFLVI-------LFI------LNETVFHENYTYPDLEELRLSGNPLHVLPTGNXXX 439
N +V L + + + +F + + L L G+ + +
Sbjct: 1212 HANLGEIVARIPGLQQLRVHCLEPNIGQQLFAKLANNTKIRLLELYGSNVQTIAPDVFTG 1271
Query: 440 XXXXXXXXXXXXXCKIDYLPPNVFNNTRNIT--SLNLANNNLSMTSELSF 487
+I LPP +F R + S+++++N ++ + SF
Sbjct: 1272 LSRSQRLQVKISHTRISDLPPGIFYALREVPHLSIDISHNRINALAADSF 1321
Score = 137 (53.3 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 112/486 (23%), Positives = 198/486 (40%)
Query: 22 INLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLT-TLNKLDLSGNPLRIIE 80
I ++ +Q V+ L L + + L I+ + F+ +T +L LD+SGN ++ +
Sbjct: 215 IEMSNTHLQSVDDETFQGLRLKTLKLIDNELQDISERSFSTMTHSLMTLDISGNKMQHLP 274
Query: 81 PGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKL 140
L SL L+ R ++T + + + L++L LS N D T V G +
Sbjct: 275 LDALQRLHSLSRLVAQRNHITTLDGNWDAQHDTLRSLHLSDN------DITEVAPGGGSI 328
Query: 141 DTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSL---DLSN 197
+ + Q+ S+ P ++ A T L N TT G+ L L DLSN
Sbjct: 329 EVVS--QNDNSSQPSSLAAVQTRLETSNSIYPPSPSSGDRTTGGRPFEQLQKLLWLDLSN 386
Query: 198 ---CHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLP 254
H+ G + V T+ LS N L+ + + L +L +SLR+ + +
Sbjct: 387 NRIYHVAGNYLPRSLV------TMDLSSNLLTVFPQQL-FEQLPELRIVSLRDNLIRSVQ 439
Query: 255 ANTFHRFTC---LQELDISHNPL----IDAFTALLSPLESLEHLDMGYSNLQRISRSTFL 307
L+ LD+ N + D F S + L L++ + + ++ + F
Sbjct: 440 WKELQVRPLRMHLERLDLGQNCIENLESDYFQQNYSDVH-LRALNLEQNFVTQLPEAVF- 497
Query: 308 KMTSLKTLILSGNKLETLESGLFQNLTH-LSVLELNNCGLTRLN---ETVFHENYTYPDL 363
K T + L+L+ N + + F+ LT L L+L LT + ++ H Y Y L
Sbjct: 498 KATGIAHLVLAFNAISRVHPSAFEGLTETLEYLDLERNRLTTVPVALSSLHHLKYLY--L 555
Query: 364 EELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTYPDLEELR 423
++S L+ LP T+ ++R + NF + +L + +NYT L L
Sbjct: 556 TSNQIS--QLNNLPSFTE--NLRVLSLS-GNNFSMIPVLGL-------KNYT--QLSYLN 601
Query: 424 LSGNPLHVLPTGNXXXXX-XXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNLSMT 482
+ N + +P G KI +L F I ++L+ N++++
Sbjct: 602 MGYNSITDIPEGIFAVDSWGSNLQTILLRNNKITHLHLGSFAGLEQIQEISLSFNDITIH 661
Query: 483 SELSFQ 488
L F+
Sbjct: 662 HPLVFE 667
Score = 42 (19.8 bits), Expect = 3.2e-23, Sum P(2) = 3.2e-23
Identities = 6/18 (33%), Positives = 9/18 (50%)
Query: 528 NPWKCDCNIADMWEWATR 545
NP +C+C + W R
Sbjct: 1345 NPLECECGLVWFGHWLRR 1362
Score = 40 (19.1 bits), Expect = 9.3e-13, Sum P(2) = 9.3e-13
Identities = 7/24 (29%), Positives = 17/24 (70%)
Query: 630 SYINMEKLNSKSFLTLGNFGLISV 653
SY +E+L +++F +LG+ +++
Sbjct: 759 SYNGLERLEAQTFHSLGDLQTLNL 782
>RGD|1308146 [details] [associations]
symbol:Shoc2 "soc-2 (suppressor of clear) homolog (C. elegans)"
species:10116 "Rattus norvegicus" [GO:0000164 "protein phosphatase
type 1 complex" evidence=IEA;ISO;ISS] [GO:0005634 "nucleus"
evidence=IEA;ISO;ISS] [GO:0005737 "cytoplasm" evidence=ISO;ISS]
[GO:0019903 "protein phosphatase binding" evidence=IEA;ISO;ISS]
[GO:0046579 "positive regulation of Ras protein signal
transduction" evidence=IEA;ISO;ISS] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR027036 PROSITE:PS51450 RGD:1308146 GO:GO:0005634
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875
Pfam:PF12799 GO:GO:0046579 GO:GO:0019903 GO:GO:0000164 HSSP:P07359
HOGENOM:HOG000116557 CTD:8036 HOVERGEN:HBG055661 OrthoDB:EOG408N7W
PANTHER:PTHR23155:SF38 EMBL:BC079032 IPI:IPI00464721
RefSeq:NP_001013173.1 UniGene:Rn.156055 ProteinModelPortal:Q6AYI5
PRIDE:Q6AYI5 GeneID:309548 KEGG:rno:309548 UCSC:RGD:1308146
InParanoid:Q6AYI5 NextBio:660958 ArrayExpress:Q6AYI5
Genevestigator:Q6AYI5 Uniprot:Q6AYI5
Length = 582
Score = 295 (108.9 bits), Expect = 5.8e-23, P = 5.8e-23
Identities = 141/461 (30%), Positives = 205/461 (44%)
Query: 19 LITINLNANPIQ--PVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPL 76
L + L +N +Q P E LV +L+ L + E +L+ + P NL L LDL N L
Sbjct: 125 LTELYLYSNKLQSLPAEVGCLV--NLMTLALSENSLTSL-PDSLDNLKKLRMLDLRHNKL 181
Query: 77 RIIEPGVF--DPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVL 134
R I V+ D LT+L YL NR +T + NL L TL + +NK+K +
Sbjct: 182 REIPSVVYRLDSLTTL-YLRFNR--ITAVEKDV-RNLPRLSTLSIRENKIKQ---LPAEI 234
Query: 135 GNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLD 194
G L L TLD+ + + +LP + N T + NL+L NEL+DL T+G NL L+ L
Sbjct: 235 GELCNLITLDVAHNQLEHLPKEI-GNCTQITNLDLQHNELLDLP--DTIG-NLSSLNRLG 290
Query: 195 LSNCHLKG-PLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSL-RNCGLSR 252
L L P S + L L L N +S S+ L L KL+ L+L RNC
Sbjct: 291 LRYNRLSAIPRS---LAKCSALEELNLENNNISTLPESL-LSSLVKLNSLTLARNC-FQL 345
Query: 253 LPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSL 312
P +F+ + L++ HN + + S + L L+M + L + F TS+
Sbjct: 346 YPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLD-FGTWTSM 404
Query: 313 KTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFH-ENYTYPDLEELRLSGN 371
L L+ N+L + + L L VL L+N L +L + + DLEE +L
Sbjct: 405 VELNLATNQLTKIPEDV-SGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESL 463
Query: 372 PLHV--LPDSTK----QYSMRTIPTQIWKNFDFLVILFILNETVFH---ENYTYPDLEEL 422
P + L D K + T+P I + L L + + H E T +LEEL
Sbjct: 464 PNEIAYLKDLQKLVLTNNQLTTLPRGIG-HLTNLTHLGLGENLLTHLPEEIGTLENLEEL 522
Query: 423 RLSGNP-LHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNV 462
L+ NP LH LP C + +LPP +
Sbjct: 523 YLNDNPNLHSLP---FELALCSKLSIMSIENCPLSHLPPQI 560
Score = 227 (85.0 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 111/394 (28%), Positives = 181/394 (45%)
Query: 55 INPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHL 114
I P LT L +L L N L+ + P L +L L L+ +LT + P + DNL L
Sbjct: 114 ILPPSVKELTQLTELYLYSNKLQSL-PAEVGCLVNLMTLALSENSLTSL-PDSLDNLKKL 171
Query: 115 KTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENEL 174
+ L+L NKL+ + V+ L L TL LR + I+ + +V N L L++ EN++
Sbjct: 172 RMLDLRHNKLR---EIPSVVYRLDSLTTLYLRFNRITAVEKDV-RNLPRLSTLSIRENKI 227
Query: 175 IDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVAL 234
L +G+ L +L +LD+++ L+ E N T++ L L N L DL +
Sbjct: 228 KQLPAE--IGE-LCNLITLDVAHNQLEHLPKEIG--NCTQITNLDLQHNEL--LDLPDTI 280
Query: 235 KPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMG 294
L+ L+RL LR LS +P + + + L+EL++ +N + +LLS L L L +
Sbjct: 281 GNLSSLNRLGLRYNRLSAIP-RSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLA 339
Query: 295 YSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVF 354
+ Q + +++ +L + N++ + G+F LS L + + LT L F
Sbjct: 340 RNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSL-PLDF 398
Query: 355 HENYTYPDLEELRLSGNPLHVLPDSTK---QYSMRTIPTQIWKNFDF-LVILFILNETVF 410
T+ + EL L+ N L +P+ + + + K L L L E
Sbjct: 399 G---TWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDL 455
Query: 411 HENY--TYP-------DLEELRLSGNPLHVLPTG 435
EN + P DL++L L+ N L LP G
Sbjct: 456 EENKLESLPNEIAYLKDLQKLVLTNNQLTTLPRG 489
Score = 195 (73.7 bits), Expect = 6.0e-12, P = 6.0e-12
Identities = 94/330 (28%), Positives = 155/330 (46%)
Query: 68 KLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSH 127
+LDLS + I+ P V + LT L L L L + P+ L +L TL LS+N L S
Sbjct: 104 RLDLSKRSIHILPPSVKE-LTQLTELYLYSNKLQSL-PAEVGCLVNLMTLALSENSLTSL 161
Query: 128 IDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNT----WLR--NLNLAENELIDLDVAT 181
D L NL KL LDLR + + +P V+ ++ +LR + E ++ +L +
Sbjct: 162 PD---SLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITAVEKDVRNLPRLS 218
Query: 182 TLG--QN-----------LVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAA 228
TL +N L +L +LD+++ L+ E N T++ L L N L
Sbjct: 219 TLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIG--NCTQITNLDLQHNEL--L 274
Query: 229 DLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESL 288
DL + L+ L+RL LR LS +P + + + L+EL++ +N + +LLS L L
Sbjct: 275 DLPDTIGNLSSLNRLGLRYNRLSAIP-RSLAKCSALEELNLENNNISTLPESLLSSLVKL 333
Query: 289 EHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTR 348
L + + Q + +++ +L + N++ + G+F LS L + + LT
Sbjct: 334 NSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTS 393
Query: 349 LNETVFHENYTYPDLEELRLSGNPLHVLPD 378
L F T+ + EL L+ N L +P+
Sbjct: 394 L-PLDFG---TWTSMVELNLATNQLTKIPE 419
Score = 181 (68.8 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 103/392 (26%), Positives = 162/392 (41%)
Query: 102 YISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANN 161
+I P + L L L L NKL+S +G L L TL L ++ +++LPD++ N
Sbjct: 113 HILPPSVKELTQLTELYLYSNKLQS---LPAEVGCLVNLMTLALSENSLTSLPDSL-DNL 168
Query: 162 TWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFV-NATKLRTLYL 220
LR L+L N+L ++ + LDSL + + V N +L TL +
Sbjct: 169 KKLRMLDLRHNKLREIPSV------VYRLDSLTTLYLRFNRITAVEKDVRNLPRLSTLSI 222
Query: 221 SGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTA 280
N + L + L L L + + L LP T + LD+ HN L+D
Sbjct: 223 RENKIK--QLPAEIGELCNLITLDVAHNQLEHLPKE-IGNCTQITNLDLQHNELLD-LPD 278
Query: 281 LLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLE 340
+ L SL L + Y+ L I RS K ++L+ L L N + TL L +L L+ L
Sbjct: 279 TIGNLSSLNRLGLRYNRLSAIPRS-LAKCSALEELNLENNNISTLPESLLSSLVKLNSLT 337
Query: 341 L-NNC-GLTRLN-ETVFHENYTYPDLEELRLSGNPLHVLPDST-------KQYSMRTIPT 390
L NC L + + F Y+ ++E R++ P + + K + ++P
Sbjct: 338 LARNCFQLYPVGGPSQFSTIYSL-NMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPL 396
Query: 391 QIWKNFDFLVILFILNE-TVFHENYT-YPDLEELRLSGNPLHVLPTGNXXXXXXXXXXXX 448
+ + N+ T E+ + LE L LS N L LP G
Sbjct: 397 DFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLE 456
Query: 449 XXXXCKIDYLPPNVFNNTRNITSLNLANNNLS 480
K++ LP N +++ L L NN L+
Sbjct: 457 EN---KLESLP-NEIAYLKDLQKLVLTNNQLT 484
Score = 126 (49.4 bits), Expect = 0.00020, P = 0.00020
Identities = 82/359 (22%), Positives = 149/359 (41%)
Query: 138 GKLDTLDLRQSGISNLPDNVFAN-NTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLS 196
GK ++ Q G++ DN N L + N + ++ +N + LD L
Sbjct: 53 GKKES-SAAQPGVAFSVDNTIKRPNPALGTRKKSSNAEVTKELNKCREENSMRLD-LSKR 110
Query: 197 NCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPAN 256
+ H+ P ++ T+L LYL N L + V L L L+L L+ LP +
Sbjct: 111 SIHILPPSVKEL----TQLTELYLYSNKLQSLPAEVGC--LVNLMTLALSENSLTSLP-D 163
Query: 257 TFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLI 316
+ L+ LD+ HN L + +++ L+SL L + ++ + + + + L TL
Sbjct: 164 SLDNLKKLRMLDLRHNKLRE-IPSVVYRLDSLTTLYLRFNRITAVEKDV-RNLPRLSTLS 221
Query: 317 LSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVL 376
+ NK++ L + + + L +L L++ + L L + + N T + L L N L L
Sbjct: 222 IRENKIKQLPAEIGE-LCNLITLDVAHNQLEHLPKEI--GNCT--QITNLDLQHNELLDL 276
Query: 377 PD------STKQYSMR-----TIPTQIWKNFDFLVILFILNETV--FHENY--TYPDLEE 421
PD S + +R IP + K L L + N + E+ + L
Sbjct: 277 PDTIGNLSSLNRLGLRYNRLSAIPRSLAK-CSALEELNLENNNISTLPESLLSSLVKLNS 335
Query: 422 LRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNLS 480
L L+ N + P G +I+ +P +F+ + ++ LN+ +N L+
Sbjct: 336 LTLARNCFQLYPVGGPSQFSTIYSLNMEHN--RINKIPFGIFSRAKVLSKLNMKDNQLT 392
>UNIPROTKB|E2R260 [details] [associations]
symbol:SHOC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046579 "positive regulation of Ras protein
signal transduction" evidence=IEA] [GO:0019903 "protein phosphatase
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000164 "protein phosphatase type 1 complex" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR027036 PROSITE:PS51450
GO:GO:0005634 InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875
Pfam:PF12799 GO:GO:0046579 GO:GO:0000164
GeneTree:ENSGT00600000084236 CTD:8036 OMA:LPHGIGN
PANTHER:PTHR23155:SF38 EMBL:AAEX03015529 RefSeq:XP_535013.2
ProteinModelPortal:E2R260 Ensembl:ENSCAFT00000017230 GeneID:477819
KEGG:cfa:477819 NextBio:20853238 Uniprot:E2R260
Length = 582
Score = 295 (108.9 bits), Expect = 5.8e-23, P = 5.8e-23
Identities = 141/461 (30%), Positives = 205/461 (44%)
Query: 19 LITINLNANPIQ--PVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPL 76
L + L +N +Q P E LV +L+ L + E +L+ + P NL L LDL N L
Sbjct: 125 LTELYLYSNKLQSLPAEVGCLV--NLMTLALNENSLTSL-PDSLDNLKKLRMLDLRHNKL 181
Query: 77 RIIEPGVF--DPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVL 134
R I V+ D LT+L YL NR +T + NL+ L L + +NK+K +
Sbjct: 182 REIPSVVYRLDSLTTL-YLRFNR--ITTVEKD-IKNLSKLSMLSIRENKIKQ---LPAEI 234
Query: 135 GNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLD 194
G L L TLD+ + + +LP + N T + NL+L NEL+DL T+G NL L L
Sbjct: 235 GELCNLITLDVAHNQLEHLPKEI-GNCTQITNLDLQHNELLDLP--DTIG-NLSSLSRLG 290
Query: 195 LSNCHLKG-PLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSL-RNCGLSR 252
L L P S + L L L N +SA S+ L L KL+ L+L RNC
Sbjct: 291 LRYNRLSAIPRS---LAKCSALEELNLENNNISALPESL-LSSLVKLNSLTLARNC-FQL 345
Query: 253 LPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSL 312
P +F+ + L++ HN + + S + L L+M + L + F TS+
Sbjct: 346 YPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLD-FGTWTSM 404
Query: 313 KTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFH-ENYTYPDLEELRLSGN 371
L L+ N+L + + L L VL L+N L +L + + DLEE +L
Sbjct: 405 VELNLATNQLTKIPEDV-SGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESL 463
Query: 372 PLHV--LPDSTK----QYSMRTIPTQIWKNFDFLVILFILNETVFH---ENYTYPDLEEL 422
P + L D K + T+P I + L L + + H E T +LEEL
Sbjct: 464 PNEIAYLKDLQKLVLTNNQLTTLPRGIG-HLTNLTHLGLGENLLTHLPEEIGTLENLEEL 522
Query: 423 RLSGNP-LHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNV 462
L+ NP LH LP C + +LPP +
Sbjct: 523 YLNDNPNLHSLP---FELALCSKLSIMSIENCPLSHLPPQI 560
Score = 232 (86.7 bits), Expect = 5.3e-16, P = 5.3e-16
Identities = 111/394 (28%), Positives = 181/394 (45%)
Query: 55 INPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHL 114
I P LT L +L L N L+ + P L +L L LN +LT + P + DNL L
Sbjct: 114 ILPSSIKELTQLTELYLYSNKLQSL-PAEVGCLVNLMTLALNENSLTSL-PDSLDNLKKL 171
Query: 115 KTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENEL 174
+ L+L NKL+ + V+ L L TL LR + I+ + ++ N + L L++ EN++
Sbjct: 172 RMLDLRHNKLR---EIPSVVYRLDSLTTLYLRFNRITTVEKDI-KNLSKLSMLSIRENKI 227
Query: 175 IDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVAL 234
L +G+ L +L +LD+++ L+ E N T++ L L N L DL +
Sbjct: 228 KQLPAE--IGE-LCNLITLDVAHNQLEHLPKEIG--NCTQITNLDLQHNEL--LDLPDTI 280
Query: 235 KPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMG 294
L+ L RL LR LS +P + + + L+EL++ +N + +LLS L L L +
Sbjct: 281 GNLSSLSRLGLRYNRLSAIP-RSLAKCSALEELNLENNNISALPESLLSSLVKLNSLTLA 339
Query: 295 YSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVF 354
+ Q + +++ +L + N++ + G+F LS L + + LT L F
Sbjct: 340 RNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSL-PLDF 398
Query: 355 HENYTYPDLEELRLSGNPLHVLPDSTK---QYSMRTIPTQIWKNFDF-LVILFILNETVF 410
T+ + EL L+ N L +P+ + + + K L L L E
Sbjct: 399 G---TWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDL 455
Query: 411 HENY--TYP-------DLEELRLSGNPLHVLPTG 435
EN + P DL++L L+ N L LP G
Sbjct: 456 EENKLESLPNEIAYLKDLQKLVLTNNQLTTLPRG 489
Score = 182 (69.1 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 103/392 (26%), Positives = 161/392 (41%)
Query: 102 YISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANN 161
+I PS+ L L L L NKL+S +G L L TL L ++ +++LPD++ N
Sbjct: 113 HILPSSIKELTQLTELYLYSNKLQS---LPAEVGCLVNLMTLALNENSLTSLPDSL-DNL 168
Query: 162 TWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLS-EDAFVNATKLRTLYL 220
LR L+L N+L ++ + LDSL + E N +KL L +
Sbjct: 169 KKLRMLDLRHNKLREIPSV------VYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSI 222
Query: 221 SGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTA 280
N + L + L L L + + L LP T + LD+ HN L+D
Sbjct: 223 RENKIK--QLPAEIGELCNLITLDVAHNQLEHLPKE-IGNCTQITNLDLQHNELLD-LPD 278
Query: 281 LLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLE 340
+ L SL L + Y+ L I RS K ++L+ L L N + L L +L L+ L
Sbjct: 279 TIGNLSSLSRLGLRYNRLSAIPRS-LAKCSALEELNLENNNISALPESLLSSLVKLNSLT 337
Query: 341 L-NNC-GLTRLN-ETVFHENYTYPDLEELRLSGNPLHVLPDST-------KQYSMRTIPT 390
L NC L + + F Y+ ++E R++ P + + K + ++P
Sbjct: 338 LARNCFQLYPVGGPSQFSTIYSL-NMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPL 396
Query: 391 QIWKNFDFLVILFILNE-TVFHENYT-YPDLEELRLSGNPLHVLPTGNXXXXXXXXXXXX 448
+ + N+ T E+ + LE L LS N L LP G
Sbjct: 397 DFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLE 456
Query: 449 XXXXCKIDYLPPNVFNNTRNITSLNLANNNLS 480
K++ LP N +++ L L NN L+
Sbjct: 457 EN---KLESLP-NEIAYLKDLQKLVLTNNQLT 484
>UNIPROTKB|P22792 [details] [associations]
symbol:CPN2 "Carboxypeptidase N subunit 2" species:9606
"Homo sapiens" [GO:0050821 "protein stabilization" evidence=NAS]
[GO:0005576 "extracellular region" evidence=NAS] [GO:0030234
"enzyme regulator activity" evidence=NAS] [GO:0050790 "regulation
of catalytic activity" evidence=NAS] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0030234 GO:GO:0005576
GO:GO:0050821 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 CTD:1370 InterPro:IPR000372
SMART:SM00013 InterPro:IPR025875 Pfam:PF12799 EMBL:AC125362
EMBL:J05158 EMBL:AC174158 EMBL:BC031569 EMBL:BC042334 EMBL:BC137398
EMBL:BC137403 IPI:IPI00479116 PIR:A34901 RefSeq:NP_001073982.2
UniGene:Hs.528368 ProteinModelPortal:P22792 SMR:P22792
STRING:P22792 DMDM:52788240 PaxDb:P22792 PRIDE:P22792
Ensembl:ENST00000323830 Ensembl:ENST00000429275 GeneID:1370
KEGG:hsa:1370 UCSC:uc003fts.3 GeneCards:GC03M194060
H-InvDB:HIX0030813 HGNC:HGNC:2313 HPA:HPA004732 MIM:603104
neXtProt:NX_P22792 PharmGKB:PA26830 HOGENOM:HOG000294123
HOVERGEN:HBG050814 InParanoid:P22792 KO:K13023 OMA:WQCDCHL
OrthoDB:EOG4WM4TF BindingDB:P22792 ChEMBL:CHEMBL3685
GenomeRNAi:1370 NextBio:5553 Bgee:P22792 CleanEx:HS_CPN2
Genevestigator:P22792 GermOnline:ENSG00000178772 Uniprot:P22792
Length = 545
Score = 292 (107.8 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 103/331 (31%), Positives = 152/331 (45%)
Query: 42 LLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLT 101
+++L Q C + P F L L L+++G+ + +F LTSL L LN L
Sbjct: 78 VVFLNTQLC---QFRPDAFGGLPRLEDLEVTGSSFLNLSTNIFSNLTSLGKLTLNFNMLE 134
Query: 102 YISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANN 161
+ F +L L++L L N+L++ + L L L TL+L Q+ ++ LP+ +F
Sbjct: 135 ALPEGLFQHLAALESLHLQGNQLQA-LPRRL-FQPLTHLKTLNLAQNLLAQLPEELFHPL 192
Query: 162 TWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLS 221
T L+ L L+ N L L G+ L L L L + ++ L F L L+L
Sbjct: 193 TSLQTLKLSNNALSGLPQGV-FGK-LGSLQELFLDSNNIS-ELPPQVFSQLFCLERLWLQ 249
Query: 222 GNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTAL 281
N ++ LS+ L L LSL+ L LPA F CL L ++HN L
Sbjct: 250 RNAITHLPLSI-FASLGNLTFLSLQWNMLRVLPAGLFAHTPCLVGLSLTHNQLETVAEGT 308
Query: 282 LSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLEL 341
+ L +L L + Y+ + + F + L L L N L L LFQNL+ L +L L
Sbjct: 309 FAHLSNLRSLMLSYNAITHLPAGIFRDLEELVKLYLGSNNLTALHPALFQNLSKLELLSL 368
Query: 342 NNCGLTRLNETVFHENYTYPDLEELRLSGNP 372
+ LT L E +F NY +L L L GNP
Sbjct: 369 SKNQLTTLPEGIFDTNY---NLFNLALHGNP 396
Score = 271 (100.5 bits), Expect = 2.2e-20, P = 2.2e-20
Identities = 97/330 (29%), Positives = 155/330 (46%)
Query: 49 ECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAF 108
E + + + + F + L K+ L P F L LE L + + +S + F
Sbjct: 58 ETSFTTLETRAFGSNPNLTKVVFLNTQLCQFRPDAFGGLPRLEDLEVTGSSFLNLSTNIF 117
Query: 109 DNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLN 168
NL L L L+ N L++ + + +L L++L L+ + + LP +F T L+ LN
Sbjct: 118 SNLTSLGKLTLNFNMLEALPEG--LFQHLAALESLHLQGNQLQALPRRLFQPLTHLKTLN 175
Query: 169 LAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAA 228
LA+N L L L L L +L LSN L G L + F L+ L+L N +S
Sbjct: 176 LAQNLLAQLP--EELFHPLTSLQTLKLSNNALSG-LPQGVFGKLGSLQELFLDSNNISEL 232
Query: 229 DLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESL 288
V L L RL L+ ++ LP + F L L + N L L + L
Sbjct: 233 PPQV-FSQLFCLERLWLQRNAITHLPLSIFASLGNLTFLSLQWNMLRVLPAGLFAHTPCL 291
Query: 289 EHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTR 348
L + ++ L+ ++ TF +++L++L+LS N + L +G+F++L L L L + LT
Sbjct: 292 VGLSLTHNQLETVAEGTFAHLSNLRSLMLSYNAITHLPAGIFRDLEELVKLYLGSNNLTA 351
Query: 349 LNETVFHENYTYPDLEELRLSGNPLHVLPD 378
L+ +F +N + LE L LS N L LP+
Sbjct: 352 LHPALF-QNLS--KLELLSLSKNQLTTLPE 378
Score = 225 (84.3 bits), Expect = 2.7e-15, P = 2.7e-15
Identities = 82/307 (26%), Positives = 124/307 (40%)
Query: 237 LTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYS 296
LT L +L+L L LP F L+ L + N L L PL L+ L++ +
Sbjct: 120 LTSLGKLTLNFNMLEALPEGLFQHLAALESLHLQGNQLQALPRRLFQPLTHLKTLNLAQN 179
Query: 297 NLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHE 356
L ++ F +TSL+TL LS N L L G+F L L L L++ ++ L VF +
Sbjct: 180 LLAQLPEELFHPLTSLQTLKLSNNALSGLPQGVFGKLGSLQELFLDSNNISELPPQVFSQ 239
Query: 357 NYTYPDLEELRLSGNPLHVLPDST-KQYSMRTIPTQIWKNFDFLVILFILNETVFHENYT 415
+ LE L L N + LP S T + W +L +L +F
Sbjct: 240 LFC---LERLWLQRNAITHLPLSIFASLGNLTFLSLQWN------MLRVLPAGLFAHT-- 288
Query: 416 YPDLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLA 475
P L L L+ N L + G I +LP +F + + L L
Sbjct: 289 -PCLVGLSLTHNQLETVAEGTFAHLSNLRSLMLSYNA--ITHLPAGIFRDLEELVKLYLG 345
Query: 476 NNNLSMTSELSFQFXXXXXXXXXXXXXXXXXTHISPTVLRHNRAITSIKLVGNPWKCDCN 535
+NNL+ FQ T + + N + ++ L GNPW+CDC+
Sbjct: 346 SNNLTALHPALFQ---NLSKLELLSLSKNQLTTLPEGIFDTNYNLFNLALHGNPWQCDCH 402
Query: 536 IADMWEW 542
+A ++ W
Sbjct: 403 LAYLFNW 409
Score = 201 (75.8 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 79/262 (30%), Positives = 128/262 (48%)
Query: 13 NLDNPGLITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLS 72
NL + G +T+N N P EG F +L L++Q L + + F LT L L+L+
Sbjct: 119 NLTSLGKLTLNFNMLEALP-EGLFQHLAALESLHLQGNQLQALPRRLFQPLTHLKTLNLA 177
Query: 73 GNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTL 132
N L + +F PLTSL+ L L+ L+ + F L L+ L L N + S +
Sbjct: 178 QNLLAQLPEELFHPLTSLQTLKLSNNALSGLPQGVFGKLGSLQELFLDSNNI-SELP-PQ 235
Query: 133 VLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDS 192
V L L+ L L+++ I++LP ++FA+ L L+L N L L L + L
Sbjct: 236 VFSQLFCLERLWLQRNAITHLPLSIFASLGNLTFLSLQWNMLRVLPAG--LFAHTPCLVG 293
Query: 193 LDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSR 252
L L++ L+ ++E F + + LR+L LS N ++ + + L +L +L L + L+
Sbjct: 294 LSLTHNQLE-TVAEGTFAHLSNLRSLMLSYNAITHLPAGI-FRDLEELVKLYLGSNNLTA 351
Query: 253 LPANTFHRFTCLQELDISHNPL 274
L F + L+ L +S N L
Sbjct: 352 LHPALFQNLSKLELLSLSKNQL 373
Score = 170 (64.9 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 63/248 (25%), Positives = 110/248 (44%)
Query: 240 LHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQ 299
L ++ N L + + F L++L+++ + ++ T + S L SL L + ++ L+
Sbjct: 75 LTKVVFLNTQLCQFRPDAFGGLPRLEDLEVTGSSFLNLSTNIFSNLTSLGKLTLNFNMLE 134
Query: 300 RISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYT 359
+ F + +L++L L GN+L+ L LFQ LTHL L L L +L E +FH
Sbjct: 135 ALPEGLFQHLAALESLHLQGNQLQALPRRLFQPLTHLKTLNLAQNLLAQLPEELFHP--- 191
Query: 360 YPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTYPDL 419
L+ L+LS N L LP + +++ + + + L VF + + L
Sbjct: 192 LTSLQTLKLSNNALSGLPQGV--FGKLGSLQELFLDSNNISEL---PPQVFSQLFC---L 243
Query: 420 EELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNL 479
E L L N + LP ++ LP +F +T + L+L +N L
Sbjct: 244 ERLWLQRNAITHLPLSIFASLGNLTFLSLQWNMLRV--LPAGLFAHTPCLVGLSLTHNQL 301
Query: 480 SMTSELSF 487
+E +F
Sbjct: 302 ETVAEGTF 309
>ZFIN|ZDB-GENE-080327-16 [details] [associations]
symbol:lingo1a "leucine rich repeat and Ig domain
containing 1a" species:7955 "Danio rerio" [GO:0005515 "protein
binding" evidence=IPI] [GO:0031103 "axon regeneration"
evidence=IMP] InterPro:IPR007110 PROSITE:PS50835
ZFIN:ZDB-GENE-080327-16 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 GO:GO:0031103
InterPro:IPR026906 Pfam:PF13306 GeneTree:ENSGT00690000101682
EMBL:BX005076 EMBL:CR759783 IPI:IPI01024439
Ensembl:ENSDART00000149965 Bgee:F8W4D7 Uniprot:F8W4D7
Length = 619
Score = 293 (108.2 bits), Expect = 1.1e-22, P = 1.1e-22
Identities = 104/307 (33%), Positives = 148/307 (48%)
Query: 69 LDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHI 128
LDLS N ++ I P F LE L LN ++ I P AF+NL L+TL L NKLK I
Sbjct: 73 LDLSKNRIKTINPDEFSAFPQLEELELNENTISAIEPGAFNNLYGLQTLGLRSNKLKL-I 131
Query: 129 DWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLV 188
+ G L L LD+ ++ I L D +F + LR+L + +N+L+ + G L
Sbjct: 132 QLGVFTG-LSNLTKLDISENKIVILLDYMFQDLYNLRSLEVGDNDLVFISHRAFHG--LS 188
Query: 189 HLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSG-NPLSAADLSVALKPLTKLHRLSLRN 247
L+ L L C+L +E AF + L TL L N S D S K L +L L + N
Sbjct: 189 SLEQLTLEKCNLTSVPTE-AFTHLHSLVTLRLRNLNINSIRDYS--FKRLYRLKVLEIAN 245
Query: 248 CG-LSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTF 306
L + N + L L I++ L L L L L+M Y+ +Q I +
Sbjct: 246 WPYLDTMTTNCLYGLN-LTSLTITNANLTSIPYLALRHLVYLRFLNMSYNPIQMIEGNRL 304
Query: 307 LKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEEL 366
+ L+ L L G +L +E F+ L +L VL +++ LT L E+VFH + +LE L
Sbjct: 305 HDLLRLQELYLVGGRLSVIEPYSFRGLNYLKVLNVSSNFLTTLEESVFH---SVGNLETL 361
Query: 367 RLSGNPL 373
L NPL
Sbjct: 362 ALHDNPL 368
Score = 220 (82.5 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 78/292 (26%), Positives = 136/292 (46%)
Query: 52 LSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNL 111
+ INP F+ L +L+L+ N + IEPG F+ L L+ L L L I F L
Sbjct: 80 IKTINPDEFSAFPQLEELELNENTISAIEPGAFNNLYGLQTLGLRSNKLKLIQLGVFTGL 139
Query: 112 NHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAE 171
++L L++S+NK+ +D+ + +L L +L++ + + + F + L L L +
Sbjct: 140 SNLTKLDISENKIVILLDY--MFQDLYNLRSLEVGDNDLVFISHRAFHGLSSLEQLTLEK 197
Query: 172 NELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLS 231
L V T +L L +L L N ++ + + +F +L+ L ++ P +
Sbjct: 198 CNLTS--VPTEAFTHLHSLVTLRLRNLNINS-IRDYSFKRLYRLKVLEIANWPYLDTMTT 254
Query: 232 VALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHL 291
L L L L++ N L+ +P L+ L++S+NP+ L L L+ L
Sbjct: 255 NCLYGLN-LTSLTITNANLTSIPYLALRHLVYLRFLNMSYNPIQMIEGNRLHDLLRLQEL 313
Query: 292 DMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNN 343
+ L I +F + LK L +S N L TLE +F ++ +L L L++
Sbjct: 314 YLVGGRLSVIEPYSFRGLNYLKVLNVSSNFLTTLEESVFHSVGNLETLALHD 365
Score = 185 (70.2 bits), Expect = 8.3e-11, P = 8.3e-11
Identities = 74/263 (28%), Positives = 126/263 (47%)
Query: 18 GLITINLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPL 76
GL T+ L +N ++ ++ G F +L L + E + + F +L L L++ N L
Sbjct: 117 GLQTLGLRSNKLKLIQLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLRSLEVGDNDL 176
Query: 77 RIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGN 136
I F L+SLE L L +CNLT + AF +L+ L TL L + S D++
Sbjct: 177 VFISHRAFHGLSSLEQLTLEKCNLTSVPTEAFTHLHSLVTLRLRNLNINSIRDYSFK--R 234
Query: 137 LGKLDTLDLRQSGISNLP--DNVFANNTWLRNLNLAENELIDLDVATT--LG-QNLVHLD 191
L +L L+ I+N P D + N L LNL + + ++ + L ++LV+L
Sbjct: 235 LYRLKVLE-----IANWPYLDTMTTN--CLYGLNLTSLTITNANLTSIPYLALRHLVYLR 287
Query: 192 SLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLS 251
L++S ++ + + + +L+ LYL G LS + + + L L L++ + L+
Sbjct: 288 FLNMSYNPIQ-MIEGNRLHDLLRLQELYLVGGRLSVIE-PYSFRGLNYLKVLNVSSNFLT 345
Query: 252 RLPANTFHRFTCLQELDISHNPL 274
L + FH L+ L + NPL
Sbjct: 346 TLEESVFHSVGNLETLALHDNPL 368
Score = 184 (69.8 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 80/309 (25%), Positives = 140/309 (45%)
Query: 22 INLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIE 80
++L+ N I+ + F L L + E T+S I P F NL L L L N L++I+
Sbjct: 73 LDLSKNRIKTINPDEFSAFPQLEELELNENTISAIEPGAFNNLYGLQTLGLRSNKLKLIQ 132
Query: 81 PGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKL 140
GVF L++L L ++ + + F +L +L++LE+ N L I G L L
Sbjct: 133 LGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLRSLEVGDNDLV-FISHRAFHG-LSSL 190
Query: 141 DTLDLRQSGISNLPDNVFAN-----NTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDL 195
+ L L + ++++P F + LRNLN+ N + D + L L L++
Sbjct: 191 EQLTLEKCNLTSVPTEAFTHLHSLVTLRLRNLNI--NSIRDYSF-----KRLYRLKVLEI 243
Query: 196 SNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPA 255
+N ++ + L +L ++ L++ +AL+ L L L++ + +
Sbjct: 244 ANWPYLDTMTTNCLYGLN-LTSLTITNANLTSIPY-LALRHLVYLRFLNMSYNPIQMIEG 301
Query: 256 NTFHRFTCLQELDISHNPL--IDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLK 313
N H LQEL + L I+ ++ L L+ L++ + L + S F + +L+
Sbjct: 302 NRLHDLLRLQELYLVGGRLSVIEPYS--FRGLNYLKVLNVSSNFLTTLEESVFHSVGNLE 359
Query: 314 TLILSGNKL 322
TL L N L
Sbjct: 360 TLALHDNPL 368
Score = 152 (58.6 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 72/295 (24%), Positives = 122/295 (41%)
Query: 193 LDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSR 252
LDLS +K ++ D F +L L L+ N +SA + A L L L LR+ L
Sbjct: 73 LDLSKNRIK-TINPDEFSAFPQLEELELNENTISAIEPG-AFNNLYGLQTLGLRSNKLKL 130
Query: 253 LPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSL 312
+ F + L +LDIS N ++ + L +L L++G ++L IS F ++SL
Sbjct: 131 IQLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLRSLEVGDNDLVFISHRAFHGLSSL 190
Query: 313 KTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNP 372
+ L L L ++ + F +L L L L N + + + F Y L+ L ++ P
Sbjct: 191 EQLTLEKCNLTSVPTEAFTHLHSLVTLRLRNLNINSIRDYSFKRLYR---LKVLEIANWP 247
Query: 373 LHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTYPDLEELRLSGNPLHVL 432
+ Y + I N + I ++ + H Y L L +S NP+ ++
Sbjct: 248 YLDTMTTNCLYGLNLTSLTI-TNANLTSIPYL---ALRHLVY----LRFLNMSYNPIQMI 299
Query: 433 PTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSF 487
GN ++ + P F + LN+++N L+ E F
Sbjct: 300 E-GNRLHDLLRLQELYLVGG-RLSVIEPYSFRGLNYLKVLNVSSNFLTTLEESVF 352
>UNIPROTKB|Q5TJ59 [details] [associations]
symbol:TLR3 "Toll-like receptor 3" species:9913 "Bos
taurus" [GO:0010008 "endosome membrane" evidence=IEA] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA] [GO:0045087 "innate
immune response" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0006954 "inflammatory response" evidence=IEA]
[GO:0051607 "defense response to virus" evidence=IEA] [GO:0050729
"positive regulation of inflammatory response" evidence=IEA]
[GO:0043330 "response to exogenous dsRNA" evidence=IEA] [GO:0034138
"toll-like receptor 3 signaling pathway" evidence=IEA] [GO:0032722
"positive regulation of chemokine production" evidence=IEA]
[GO:0004888 "transmembrane signaling receptor activity"
evidence=IEA] [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0002756 "MyD88-independent toll-like receptor
signaling pathway" evidence=IEA] InterPro:IPR000157
InterPro:IPR001611 InterPro:IPR027173 Pfam:PF01582 PROSITE:PS50104
PROSITE:PS51450 SMART:SM00255 GO:GO:0016021 GO:GO:0007165
GO:GO:0005789 GO:GO:0006954 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0045087
GO:GO:0003723 GO:GO:0010008 InterPro:IPR000372 SMART:SM00013
SUPFAM:SSF52200 EMBL:AJ812026 IPI:IPI00713414 RefSeq:NP_001008664.1
UniGene:Bt.12298 HSSP:O15455 ProteinModelPortal:Q5TJ59
STRING:Q5TJ59 PRIDE:Q5TJ59 GeneID:281535 KEGG:bta:281535 CTD:7098
HOVERGEN:HBG023181 InParanoid:Q5TJ59 KO:K05401 OrthoDB:EOG4N30N8
NextBio:20805490 PANTHER:PTHR24365:SF5 Uniprot:Q5TJ59
Length = 904
Score = 296 (109.3 bits), Expect = 1.2e-22, P = 1.2e-22
Identities = 115/377 (30%), Positives = 184/377 (48%)
Query: 17 PGLITINLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNP 75
P L +NL N I + + F+ +L L++ ++ KI F NL L KLDLS N
Sbjct: 100 PWLEILNLQHNEISQLSDKTFIFCMNLTELHLMSNSIQKIKNDPFKNLKNLIKLDLSHNG 159
Query: 76 LRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNH--LKTLELSQNKLKSHIDWTLV 133
L + G L +L+ L+L+ ++ ++P FD L + LK LELS N++K
Sbjct: 160 LSSTKLGTQLQLENLQELLLSNNKISSLTPGEFDFLGNSSLKRLELSSNQIKEFSPGCF- 218
Query: 134 LGNLGKLDTLDLRQSGIS-NLPDNVFA--NNTWLRNLNLAENELIDLDVATTLGQNLVHL 190
LG+L L L + +S +L + + +NT + NL+L+ N+L + T G +L
Sbjct: 219 -HTLGELSGLSLNNAKLSPSLTEKLCLELSNTSIENLSLSSNQLDTISHTTFDGLKQTNL 277
Query: 191 DSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLR---- 246
+LDLS L+ + D+F L L L N + S + L+ L RL LR
Sbjct: 278 TTLDLSRNSLR-VMGNDSFAWLPHLEYLSLEYNNIEHLS-SRSFYGLSNLRRLDLRRSFT 335
Query: 247 --NCGLSRLPAN---TFHRFTCLQELDISHN--PLI--DAFTALLSPLESLEHLDMGYSN 297
+ L+ LP +F CL+ L++ N P I + FT L+ L+ L L +S+
Sbjct: 336 RQSISLTSLPKIDDFSFQWLKCLEYLNMDDNNFPGIKRNTFTGLVR-LKFLS-LSNSFSS 393
Query: 298 LQRISRSTFLKMTSLKTLIL--SGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFH 355
L+ ++ TFL + L+L + NK+ ++SG F L HL VL+L GL + + +
Sbjct: 394 LRTLTNETFLSLAGCPLLLLDLTKNKISKIQSGAFSWLGHLEVLDL---GLNEIGQELTG 450
Query: 356 ENYTYPD-LEELRLSGN 371
+ + D + E+ LS N
Sbjct: 451 QEWRGLDNIVEIYLSYN 467
Score = 188 (71.2 bits), Expect = 7.0e-11, P = 7.0e-11
Identities = 130/514 (25%), Positives = 211/514 (41%)
Query: 7 VYNDR-RNLDNPGLITINLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINP-QF-FTN 62
+ ND +NL N LI ++L+ N + + G L +L L + +S + P +F F
Sbjct: 139 IKNDPFKNLKN--LIKLDLSHNGLSSTKLGTQLQLENLQELLLSNNKISSLTPGEFDFLG 196
Query: 63 LTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNL------NHLKT 116
++L +L+LS N ++ PG F L L L LN L SPS + L ++
Sbjct: 197 NSSLKRLELSSNQIKEFSPGCFHTLGELSGLSLNNAKL---SPSLTEKLCLELSNTSIEN 253
Query: 117 LELSQNKLKSHIDWTLVLG-NLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELI 175
L LS N+L + I T G L TLDL ++ + + ++ FA L L+L N +
Sbjct: 254 LSLSSNQLDT-ISHTTFDGLKQTNLTTLDLSRNSLRVMGNDSFAWLPHLEYLSLEYNNIE 312
Query: 176 DLDVATTLG-QNLVHLD---SLDLSNCHLKG-PLSEDAFVNATK-LRTLYLSGNPLSAAD 229
L + G NL LD S + L P +D K L L + N
Sbjct: 313 HLSSRSFYGLSNLRRLDLRRSFTRQSISLTSLPKIDDFSFQWLKCLEYLNMDDNNFPGIK 372
Query: 230 LSVALKPLTKLHRLSLRNC--GLSRLPANTFHRFT-C-LQELDISHNPLIDAFTALLSPL 285
+ L +L LSL N L L TF C L LD++ N + + S L
Sbjct: 373 RNT-FTGLVRLKFLSLSNSFSSLRTLTNETFLSLAGCPLLLLDLTKNKISKIQSGAFSWL 431
Query: 286 ESLEHLDMGYSNL-QRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNC 344
LE LD+G + + Q ++ + + ++ + LS NK L + F ++ L L L
Sbjct: 432 GHLEVLDLGLNEIGQELTGQEWRGLDNIVEIYLSYNKYLELTTNSFTSVPSLQRLMLRRV 491
Query: 345 GLTRLN--ETVFHENYTYPDLEELRLSGNPLHVLPDSTKQ--YSMRTIPTQ------IWK 394
L ++ + F P+L L LS N + + D + + + Q +WK
Sbjct: 492 ALKNVDCSPSPFRP---LPNLVILDLSNNNIANINDELLKGLEKLEILDLQHNNLARLWK 548
Query: 395 NFD-FLVILFILNETVFHENYTYPDLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXC 453
+ + + F+ + +FH L L L N +P
Sbjct: 549 HANPGGPVQFL--KGLFH-------LHILNLGSNGFDEIPV--EAFKDLRELKSIDLGMN 597
Query: 454 KIDYLPPNVFNNTRNITSLNLANNNLSMTSELSF 487
++ LP +VF+N ++ SL+L N ++ + F
Sbjct: 598 NLNILPQSVFDNQVSLKSLSLQKNLITSVQKTVF 631
Score = 174 (66.3 bits), Expect = 9.6e-09, Sum P(2) = 9.6e-09
Identities = 78/275 (28%), Positives = 120/275 (43%)
Query: 88 TSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQ 147
T++ L L L + P+ F + L TL+ N + S ++ L +L L+ L+L+
Sbjct: 52 TNITVLNLTHNQLRRLPPANFTRYSQLTTLDGGFNSI-SKLEPELCQ-SLPWLEILNLQH 109
Query: 148 SGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSED 207
+ IS L D F L L+L N + + +NL +L LDLS+ L
Sbjct: 110 NEISQLSDKTFIFCMNLTELHLMSNSI--QKIKNDPFKNLKNLIKLDLSHNGLSST-KLG 166
Query: 208 AFVNATKLRTLYLSGNPLSAADLS-VALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQE 266
+ L+ L LS N +S+ + L RL L + + FH L
Sbjct: 167 TQLQLENLQELLLSNNKISSLTPGEFDFLGNSSLKRLELSSNQIKEFSPGCFHTLGELSG 226
Query: 267 LDISHNPLIDAFTALLSPLE----SLEHLDMGYSNLQRISRSTF--LKMTSLKTLILSGN 320
L +++ L + T L LE S+E+L + + L IS +TF LK T+L TL LS N
Sbjct: 227 LSLNNAKLSPSLTEKLC-LELSNTSIENLSLSSNQLDTISHTTFDGLKQTNLTTLDLSRN 285
Query: 321 KLETLESGLFQNLTHLSVLELNNCGLTRLNETVFH 355
L + + F L HL L L + L+ F+
Sbjct: 286 SLRVMGNDSFAWLPHLEYLSLEYNNIEHLSSRSFY 320
Score = 169 (64.5 bits), Expect = 7.9e-09, P = 7.9e-09
Identities = 96/378 (25%), Positives = 154/378 (40%)
Query: 61 TNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELS 120
TNLTTL DLS N LR++ F L LEYL L N+ ++S +F L++L+ L+L
Sbjct: 275 TNLTTL---DLSRNSLRVMGNDSFAWLPHLEYLSLEYNNIEHLSSRSFYGLSNLRRLDLR 331
Query: 121 QNKLKSHIDWTLV--LGN-----LGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAEN- 172
++ + I T + + + L L+ L++ + + N F L+ L+L+ +
Sbjct: 332 RSFTRQSISLTSLPKIDDFSFQWLKCLEYLNMDDNNFPGIKRNTFTGLVRLKFLSLSNSF 391
Query: 173 -ELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLS 231
L L T L L LDL+ + + AF L L L N +
Sbjct: 392 SSLRTLTNETFLSLAGCPLLLLDLTKNKIS-KIQSGAFSWLGHLEVLDLGLNEIGQELTG 450
Query: 232 VALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPL--IDAFTALLSPLESLE 289
+ L + + L L N+F LQ L + L +D + PL +L
Sbjct: 451 QEWRGLDNIVEIYLSYNKYLELTTNSFTSVPSLQRLMLRRVALKNVDCSPSPFRPLPNLV 510
Query: 290 HLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETL-----ESGLFQNLTHLSVLELNNC 344
LD+ +N+ I+ + L+ L L N L L G Q L L L + N
Sbjct: 511 ILDLSNNNIANINDELLKGLEKLEILDLQHNNLARLWKHANPGGPVQFLKGLFHLHILNL 570
Query: 345 GLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFI 404
G +E +L+ + L N L++LP S + + KN ++
Sbjct: 571 GSNGFDEIPVEAFKDLRELKSIDLGMNNLNILPQSVFDNQVSLKSLSLQKN-----LITS 625
Query: 405 LNETVF---HENYTYPDL 419
+ +TVF N +Y D+
Sbjct: 626 VQKTVFGPAFRNLSYLDM 643
Score = 162 (62.1 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 77/274 (28%), Positives = 120/274 (43%)
Query: 52 LSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNL 111
L ++ P FT + L LD N + +EP + L LE L L ++ +S F
Sbjct: 64 LRRLPPANFTRYSQLTTLDGGFNSISKLEPELCQSLPWLEILNLQHNEISQLSDKTFIFC 123
Query: 112 NHLKTLELSQNKL-KSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLA 170
+L L L N + K D NL L LDL +G+S+ L+ L L+
Sbjct: 124 MNLTELHLMSNSIQKIKND---PFKNLKNLIKLDLSHNGLSSTKLGTQLQLENLQELLLS 180
Query: 171 ENELIDLDVATT--LGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAA 228
N++ L LG + L L+LS+ +K S F +L L L+ LS +
Sbjct: 181 NNKISSLTPGEFDFLGNS--SLKRLELSSNQIK-EFSPGCFHTLGELSGLSLNNAKLSPS 237
Query: 229 ---DLSVALKPLTKLHRLSLRNCGLSRLPANTFH--RFTCLQELDISHNPLIDAFTALLS 283
L + L T + LSL + L + TF + T L LD+S N L +
Sbjct: 238 LTEKLCLELSN-TSIENLSLSSNQLDTISHTTFDGLKQTNLTTLDLSRNSLRVMGNDSFA 296
Query: 284 PLESLEHLDMGYSNLQRISRSTFLKMTSLKTLIL 317
L LE+L + Y+N++ +S +F +++L+ L L
Sbjct: 297 WLPHLEYLSLEYNNIEHLSSRSFYGLSNLRRLDL 330
Score = 160 (61.4 bits), Expect = 7.5e-08, P = 7.5e-08
Identities = 84/326 (25%), Positives = 140/326 (42%)
Query: 35 AFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGN--PLRIIEPGVFDPLTSLEY 92
+F + L YL M + I FT L L L LS + LR + F L
Sbjct: 351 SFQWLKCLEYLNMDDNNFPGIKRNTFTGLVRLKFLSLSNSFSSLRTLTNETFLSLAGCPL 410
Query: 93 LMLN--RCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGI 150
L+L+ + ++ I AF L HL+ L+L N++ + G L + + L +
Sbjct: 411 LLLDLTKNKISKIQSGAFSWLGHLEVLDLGLNEIGQELTGQEWRG-LDNIVEIYLSYNKY 469
Query: 151 SNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFV 210
L N F + L+ L L L ++D + + + L +L LDLSN ++ ++++
Sbjct: 470 LELTTNSFTSVPSLQRLMLRRVALKNVDCSPSPFRPLPNLVILDLSNNNIAN-INDELLK 528
Query: 211 NATKLRTLYLSGNPLSA----ADLSVA---LKPLTKLHRLSLRNCGLSRLPANTFHRFTC 263
KL L L N L+ A+ LK L LH L+L + G +P F
Sbjct: 529 GLEKLEILDLQHNNLARLWKHANPGGPVQFLKGLFHLHILNLGSNGFDEIPVEAFKDLRE 588
Query: 264 LQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTF-LKMTSLKTLILSGNKL 322
L+ +D+ N L ++ SL+ L + + + + ++ F +L L + N
Sbjct: 589 LKSIDLGMNNLNILPQSVFDNQVSLKSLSLQKNLITSVQKTVFGPAFRNLSYLDMRFNPF 648
Query: 323 E-TLES-GLFQN---LTHLSVLELNN 343
+ T ES F N +TH ++ EL+N
Sbjct: 649 DCTCESIAWFVNWINITHTNISELSN 674
Score = 142 (55.0 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 79/309 (25%), Positives = 135/309 (43%)
Query: 193 LDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSR 252
L+L++ L+ L F ++L TL N +S + + + L L L+L++ +S+
Sbjct: 57 LNLTHNQLRR-LPPANFTRYSQLTTLDGGFNSISKLEPELC-QSLPWLEILNLQHNEISQ 114
Query: 253 LPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSL 312
L TF L EL + N + L++L LD+ ++ L T L++ +L
Sbjct: 115 LSDKTFIFCMNLTELHLMSNSIQKIKNDPFKNLKNLIKLDLSHNGLSSTKLGTQLQLENL 174
Query: 313 KTLILSGNKLETLESGLFQNLTHLSV--LELNNCGLTRLNETVFHENYTYPDLEELRLSG 370
+ L+LS NK+ +L G F L + S+ LEL++ + + FH T +L L L+
Sbjct: 175 QELLLSNNKISSLTPGEFDFLGNSSLKRLELSSNQIKEFSPGCFH---TLGELSGLSLNN 231
Query: 371 NPLHVLPDSTKQYSMRTIPTQIWKNFDFLVI-LFILNETVFHENYTYPDLEELRLSGNPL 429
L P T++ + T I +N L ++ T F + +L L LS N L
Sbjct: 232 AKLS--PSLTEKLCLELSNTSI-ENLSLSSNQLDTISHTTF-DGLKQTNLTTLDLSRNSL 287
Query: 430 HVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANN----NLSMTS-- 483
V+ GN I++L F N+ L+L + ++S+TS
Sbjct: 288 RVM--GNDSFAWLPHLEYLSLEYNNIEHLSSRSFYGLSNLRRLDLRRSFTRQSISLTSLP 345
Query: 484 ---ELSFQF 489
+ SFQ+
Sbjct: 346 KIDDFSFQW 354
Score = 136 (52.9 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 44/141 (31%), Positives = 73/141 (51%)
Query: 238 TKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSN 297
T + L+L + L RLP F R++ L LD N + L L LE L++ ++
Sbjct: 52 TNITVLNLTHNQLRRLPPANFTRYSQLTTLDGGFNSISKLEPELCQSLPWLEILNLQHNE 111
Query: 298 LQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGL--TRLNETVFH 355
+ ++S TF+ +L L L N ++ +++ F+NL +L L+L++ GL T+L +
Sbjct: 112 ISQLSDKTFIFCMNLTELHLMSNSIQKIKNDPFKNLKNLIKLDLSHNGLSSTKLGTQLQL 171
Query: 356 ENYTYPDLEELRLSGNPLHVL 376
EN L+EL LS N + L
Sbjct: 172 EN-----LQELLLSNNKISSL 187
Score = 128 (50.1 bits), Expect = 0.00021, P = 0.00021
Identities = 58/195 (29%), Positives = 85/195 (43%)
Query: 12 RNLDNPGLITINLNANP-IQPVEGAFLVARSLLYLYMQECTLSKIN--PQFFTNLTTLNK 68
R LDN ++ I L+ N ++ +F SL L ++ L ++ P F L L
Sbjct: 454 RGLDN--IVEIYLSYNKYLELTTNSFTSVPSLQRLMLRRVALKNVDCSPSPFRPLPNLVI 511
Query: 69 LDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYI-------SPSAF-DNLNHLKTLELS 120
LDLS N + I + L LE L L NL + P F L HL L L
Sbjct: 512 LDLSNNNIANINDELLKGLEKLEILDLQHNNLARLWKHANPGGPVQFLKGLFHLHILNLG 571
Query: 121 QNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVA 180
N I +L +L ++DL + ++ LP +VF N L++L+L +N LI
Sbjct: 572 SNGF-DEIP-VEAFKDLRELKSIDLGMNNLNILPQSVFDNQVSLKSLSLQKN-LITSVQK 628
Query: 181 TTLGQNLVHLDSLDL 195
T G +L LD+
Sbjct: 629 TVFGPAFRNLSYLDM 643
Score = 43 (20.2 bits), Expect = 9.6e-09, Sum P(2) = 9.6e-09
Identities = 9/17 (52%), Positives = 12/17 (70%)
Query: 631 YINMEKLNSKSFLTLGN 647
Y N+E L+S+SF L N
Sbjct: 308 YNNIEHLSSRSFYGLSN 324
>UNIPROTKB|A5H649 [details] [associations]
symbol:TLR3 "Toll-like receptor 3" species:9913 "Bos
taurus" [GO:0071260 "cellular response to mechanical stimulus"
evidence=IEA] [GO:0051092 "positive regulation of NF-kappaB
transcription factor activity" evidence=IEA] [GO:0046330 "positive
regulation of JNK cascade" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045359 "positive regulation of interferon-beta
biosynthetic process" evidence=IEA] [GO:0045356 "positive
regulation of interferon-alpha biosynthetic process" evidence=IEA]
[GO:0045080 "positive regulation of chemokine biosynthetic process"
evidence=IEA] [GO:0045078 "positive regulation of interferon-gamma
biosynthetic process" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0043123 "positive regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IEA] [GO:0042346
"positive regulation of NF-kappaB import into nucleus"
evidence=IEA] [GO:0034346 "positive regulation of type III
interferon production" evidence=IEA] [GO:0034123 "positive
regulation of toll-like receptor signaling pathway" evidence=IEA]
[GO:0032760 "positive regulation of tumor necrosis factor
production" evidence=IEA] [GO:0032757 "positive regulation of
interleukin-8 production" evidence=IEA] [GO:0032755 "positive
regulation of interleukin-6 production" evidence=IEA] [GO:0032735
"positive regulation of interleukin-12 production" evidence=IEA]
[GO:0032728 "positive regulation of interferon-beta production"
evidence=IEA] [GO:0032722 "positive regulation of chemokine
production" evidence=IEA] [GO:0007252 "I-kappaB phosphorylation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0051607 "defense response
to virus" evidence=IEA] [GO:0050729 "positive regulation of
inflammatory response" evidence=IEA] [GO:0045087 "innate immune
response" evidence=IEA] [GO:0034138 "toll-like receptor 3 signaling
pathway" evidence=IEA] [GO:0004888 "transmembrane signaling
receptor activity" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0002756 "MyD88-independent toll-like
receptor signaling pathway" evidence=IEA] InterPro:IPR000157
InterPro:IPR001611 InterPro:IPR027173 Pfam:PF01582 PROSITE:PS50104
PROSITE:PS51450 SMART:SM00255 GO:GO:0016021 GO:GO:0005737
GO:GO:0006952 GO:GO:0043123 GO:GO:0046330 GO:GO:0045944
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0032722 GO:GO:0032755 GO:GO:0009615 GO:GO:0051092
GO:GO:0032757 GO:GO:0071260 InterPro:IPR000372 SMART:SM00013
GO:GO:0032760 GO:GO:0043330 GO:GO:0032735 GO:GO:0042346
GO:GO:0045078 GO:GO:0032728 GO:GO:0007252 GO:GO:0045080
SUPFAM:SSF52200 GO:GO:0045359 GeneTree:ENSGT00680000099674
GO:GO:0034123 IPI:IPI00713414 UniGene:Bt.12298 HOVERGEN:HBG023181
PANTHER:PTHR24365:SF5 GO:GO:0045356 GO:GO:0034346 EMBL:DAAA02060200
EMBL:EF076741 EMBL:EF076742 EMBL:EF076745 EMBL:EF076746
EMBL:EF076749 STRING:A5H649 Ensembl:ENSBTAT00000011445
InParanoid:A5H649 OMA:WINKTHT Uniprot:A5H649
Length = 904
Score = 296 (109.3 bits), Expect = 1.2e-22, P = 1.2e-22
Identities = 115/377 (30%), Positives = 184/377 (48%)
Query: 17 PGLITINLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNP 75
P L +NL N I + + F+ +L L++ ++ KI F NL L KLDLS N
Sbjct: 100 PWLEILNLQHNEISQLSDKTFIFCMNLTELHLMSNSIQKIKNDPFKNLKNLIKLDLSHNG 159
Query: 76 LRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNH--LKTLELSQNKLKSHIDWTLV 133
L + G L +L+ L+L+ ++ ++P FD L + LK LELS N++K
Sbjct: 160 LSSTKLGTQLQLENLQELLLSNNKISSLTPEEFDFLGNSSLKRLELSSNQIKEFSPGCF- 218
Query: 134 LGNLGKLDTLDLRQSGIS-NLPDNVFA--NNTWLRNLNLAENELIDLDVATTLGQNLVHL 190
LG+L L L + +S +L + + +NT + NL+L+ N+L + T G +L
Sbjct: 219 -HTLGELSGLSLNNAKLSPSLTEKLCLELSNTSIENLSLSSNQLDTISHTTFDGLKQTNL 277
Query: 191 DSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLR---- 246
+LDLS L+ + D+F L L L N + S + L+ L RL LR
Sbjct: 278 TTLDLSRNSLR-VMGNDSFAWLPHLEYLSLEYNNIEHLS-SRSFYGLSNLRRLDLRRSFT 335
Query: 247 --NCGLSRLPAN---TFHRFTCLQELDISHN--PLI--DAFTALLSPLESLEHLDMGYSN 297
+ L+ LP +F CL+ L++ N P I + FT L+ L+ L L +S+
Sbjct: 336 RQSISLTSLPKIDDFSFQWLKCLEYLNMDDNNFPGIKRNTFTGLVR-LKFLS-LSNSFSS 393
Query: 298 LQRISRSTFLKMTSLKTLILS--GNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFH 355
L+ ++ TFL + L+L+ NK+ ++SG F L HL VL+L GL + + +
Sbjct: 394 LRTLTNETFLSLAGCPLLLLNLTKNKISKIQSGAFSWLGHLEVLDL---GLNEIGQELTG 450
Query: 356 ENYTYPD-LEELRLSGN 371
+ + D + E+ LS N
Sbjct: 451 QEWRGLDNIVEIYLSYN 467
Score = 185 (70.2 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 129/514 (25%), Positives = 211/514 (41%)
Query: 7 VYNDR-RNLDNPGLITINLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNL- 63
+ ND +NL N LI ++L+ N + + G L +L L + +S + P+ F L
Sbjct: 139 IKNDPFKNLKN--LIKLDLSHNGLSSTKLGTQLQLENLQELLLSNNKISSLTPEEFDFLG 196
Query: 64 -TTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNL------NHLKT 116
++L +L+LS N ++ PG F L L L LN L SPS + L ++
Sbjct: 197 NSSLKRLELSSNQIKEFSPGCFHTLGELSGLSLNNAKL---SPSLTEKLCLELSNTSIEN 253
Query: 117 LELSQNKLKSHIDWTLVLG-NLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELI 175
L LS N+L + I T G L TLDL ++ + + ++ FA L L+L N +
Sbjct: 254 LSLSSNQLDT-ISHTTFDGLKQTNLTTLDLSRNSLRVMGNDSFAWLPHLEYLSLEYNNIE 312
Query: 176 DLDVATTLG-QNLVHLD---SLDLSNCHLKG-PLSEDAFVNATK-LRTLYLSGNPLSAAD 229
L + G NL LD S + L P +D K L L + N
Sbjct: 313 HLSSRSFYGLSNLRRLDLRRSFTRQSISLTSLPKIDDFSFQWLKCLEYLNMDDNNFPGIK 372
Query: 230 LSVALKPLTKLHRLSLRNC--GLSRLPANTFHRFT-C-LQELDISHNPLIDAFTALLSPL 285
+ L +L LSL N L L TF C L L+++ N + + S L
Sbjct: 373 RNT-FTGLVRLKFLSLSNSFSSLRTLTNETFLSLAGCPLLLLNLTKNKISKIQSGAFSWL 431
Query: 286 ESLEHLDMGYSNL-QRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNC 344
LE LD+G + + Q ++ + + ++ + LS NK L + F ++ L L L
Sbjct: 432 GHLEVLDLGLNEIGQELTGQEWRGLDNIVEIYLSYNKYLELTTNSFTSVPSLQRLMLRRV 491
Query: 345 GLTRLN--ETVFHENYTYPDLEELRLSGNPLHVLPDSTKQ--YSMRTIPTQ------IWK 394
L ++ + F P+L L LS N + + D + + + Q +WK
Sbjct: 492 ALKNVDCSPSPFRP---LPNLVILDLSNNNIANINDELLKGLEKLEILDLQHNNLARLWK 548
Query: 395 NFD-FLVILFILNETVFHENYTYPDLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXC 453
+ + + F+ + +FH L L L N +P
Sbjct: 549 HANPGGPVQFL--KGLFH-------LHILNLGSNGFDEIPV--EAFKDLRELKSIDLGMN 597
Query: 454 KIDYLPPNVFNNTRNITSLNLANNNLSMTSELSF 487
++ LP +VF+N ++ SL+L N ++ + F
Sbjct: 598 NLNILPQSVFDNQVSLKSLSLQKNLITSVQKTVF 631
Score = 169 (64.5 bits), Expect = 7.9e-09, P = 7.9e-09
Identities = 97/381 (25%), Positives = 153/381 (40%)
Query: 61 TNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELS 120
TNLTTL DLS N LR++ F L LEYL L N+ ++S +F L++L+ L+L
Sbjct: 275 TNLTTL---DLSRNSLRVMGNDSFAWLPHLEYLSLEYNNIEHLSSRSFYGLSNLRRLDLR 331
Query: 121 QNKLKSHIDWTLVLGNLGKLDTLD---LRQSGISNLPDNVFANNTWLRNLNLAENELIDL 177
++ + I T +L K+D L+ N+ DN F L + + L
Sbjct: 332 RSFTRQSISLT----SLPKIDDFSFQWLKCLEYLNMDDNNFPGIKRNTFTGLVRLKFLSL 387
Query: 178 DVATTLGQNLVHLDSLDLSNCHL------KGPLSE---DAFVNATKLRTLYLSGNPLSAA 228
+ + + L + L L+ C L K +S+ AF L L L N +
Sbjct: 388 SNSFSSLRTLTNETFLSLAGCPLLLLNLTKNKISKIQSGAFSWLGHLEVLDLGLNEIGQE 447
Query: 229 DLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPL--IDAFTALLSPLE 286
+ L + + L L N+F LQ L + L +D + PL
Sbjct: 448 LTGQEWRGLDNIVEIYLSYNKYLELTTNSFTSVPSLQRLMLRRVALKNVDCSPSPFRPLP 507
Query: 287 SLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETL-----ESGLFQNLTHLSVLEL 341
+L LD+ +N+ I+ + L+ L L N L L G Q L L L +
Sbjct: 508 NLVILDLSNNNIANINDELLKGLEKLEILDLQHNNLARLWKHANPGGPVQFLKGLFHLHI 567
Query: 342 NNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVI 401
N G +E +L+ + L N L++LP S + + KN +
Sbjct: 568 LNLGSNGFDEIPVEAFKDLRELKSIDLGMNNLNILPQSVFDNQVSLKSLSLQKN-----L 622
Query: 402 LFILNETVF---HENYTYPDL 419
+ + +TVF N +Y D+
Sbjct: 623 ITSVQKTVFGPAFRNLSYLDM 643
Score = 162 (62.1 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 76/258 (29%), Positives = 116/258 (44%)
Query: 141 DTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVAT-TLGQNLVHLDSLDLSNCH 199
+ D ++ +PD++ N T L NL N+L L A T L LD S
Sbjct: 34 EVADCSHLKLTQIPDDLPTNITVL---NLTHNQLRRLPPANFTRYSQLTILDGGFNSISK 90
Query: 200 LKGPLSEDAFVNATKLRTLYLSGNPLSA-ADLS-VALKPLTKLHRLSLRNCGLSRLPANT 257
L+ L + + L L L N +S +D + + LT+LH +S N + ++ +
Sbjct: 91 LEPELCQ----SLPWLEILNLQHNEISQLSDKTFIFCMNLTELHLMS--N-SIQKIKNDP 143
Query: 258 FHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTF--LKMTSLKTL 315
F L +LD+SHN L LE+L+ L + + + ++ F L +SLK L
Sbjct: 144 FKNLKNLIKLDLSHNGLSSTKLGTQLQLENLQELLLSNNKISSLTPEEFDFLGNSSLKRL 203
Query: 316 ILSGNKLETLESGLFQNLTHLSVLELNNCGLT-RLNETVFHENYTYPDLEELRLSGNPL- 373
LS N+++ G F L LS L LNN L+ L E + E + +E L LS N L
Sbjct: 204 ELSSNQIKEFSPGCFHTLGELSGLSLNNAKLSPSLTEKLCLE-LSNTSIENLSLSSNQLD 262
Query: 374 ---HVLPDSTKQYSMRTI 388
H D KQ ++ T+
Sbjct: 263 TISHTTFDGLKQTNLTTL 280
Score = 161 (61.7 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 85/326 (26%), Positives = 139/326 (42%)
Query: 35 AFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGN--PLRIIEPGVFDPLTSLEY 92
+F + L YL M + I FT L L L LS + LR + F L
Sbjct: 351 SFQWLKCLEYLNMDDNNFPGIKRNTFTGLVRLKFLSLSNSFSSLRTLTNETFLSLAGCPL 410
Query: 93 LMLN--RCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGI 150
L+LN + ++ I AF L HL+ L+L N++ + G L + + L +
Sbjct: 411 LLLNLTKNKISKIQSGAFSWLGHLEVLDLGLNEIGQELTGQEWRG-LDNIVEIYLSYNKY 469
Query: 151 SNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFV 210
L N F + L+ L L L ++D + + + L +L LDLSN ++ ++++
Sbjct: 470 LELTTNSFTSVPSLQRLMLRRVALKNVDCSPSPFRPLPNLVILDLSNNNIAN-INDELLK 528
Query: 211 NATKLRTLYLSGNPLSA----ADLSVA---LKPLTKLHRLSLRNCGLSRLPANTFHRFTC 263
KL L L N L+ A+ LK L LH L+L + G +P F
Sbjct: 529 GLEKLEILDLQHNNLARLWKHANPGGPVQFLKGLFHLHILNLGSNGFDEIPVEAFKDLRE 588
Query: 264 LQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTF-LKMTSLKTLILSGNKL 322
L+ +D+ N L ++ SL+ L + + + + ++ F +L L + N
Sbjct: 589 LKSIDLGMNNLNILPQSVFDNQVSLKSLSLQKNLITSVQKTVFGPAFRNLSYLDMRFNPF 648
Query: 323 E-TLES-GLFQNL---THLSVLELNN 343
+ T ES F N TH ++ EL+N
Sbjct: 649 DCTCESIAWFVNWINSTHTNISELSN 674
Score = 161 (61.7 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 77/274 (28%), Positives = 121/274 (44%)
Query: 52 LSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNL 111
L ++ P FT + L LD N + +EP + L LE L L ++ +S F
Sbjct: 64 LRRLPPANFTRYSQLTILDGGFNSISKLEPELCQSLPWLEILNLQHNEISQLSDKTFIFC 123
Query: 112 NHLKTLELSQNKL-KSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLA 170
+L L L N + K D NL L LDL +G+S+ L+ L L+
Sbjct: 124 MNLTELHLMSNSIQKIKND---PFKNLKNLIKLDLSHNGLSSTKLGTQLQLENLQELLLS 180
Query: 171 ENELIDL--DVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAA 228
N++ L + LG + L L+LS+ +K S F +L L L+ LS +
Sbjct: 181 NNKISSLTPEEFDFLGNS--SLKRLELSSNQIK-EFSPGCFHTLGELSGLSLNNAKLSPS 237
Query: 229 ---DLSVALKPLTKLHRLSLRNCGLSRLPANTFH--RFTCLQELDISHNPLIDAFTALLS 283
L + L T + LSL + L + TF + T L LD+S N L +
Sbjct: 238 LTEKLCLELSN-TSIENLSLSSNQLDTISHTTFDGLKQTNLTTLDLSRNSLRVMGNDSFA 296
Query: 284 PLESLEHLDMGYSNLQRISRSTFLKMTSLKTLIL 317
L LE+L + Y+N++ +S +F +++L+ L L
Sbjct: 297 WLPHLEYLSLEYNNIEHLSSRSFYGLSNLRRLDL 330
Score = 128 (50.1 bits), Expect = 0.00021, P = 0.00021
Identities = 58/195 (29%), Positives = 85/195 (43%)
Query: 12 RNLDNPGLITINLNANP-IQPVEGAFLVARSLLYLYMQECTLSKIN--PQFFTNLTTLNK 68
R LDN ++ I L+ N ++ +F SL L ++ L ++ P F L L
Sbjct: 454 RGLDN--IVEIYLSYNKYLELTTNSFTSVPSLQRLMLRRVALKNVDCSPSPFRPLPNLVI 511
Query: 69 LDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYI-------SPSAF-DNLNHLKTLELS 120
LDLS N + I + L LE L L NL + P F L HL L L
Sbjct: 512 LDLSNNNIANINDELLKGLEKLEILDLQHNNLARLWKHANPGGPVQFLKGLFHLHILNLG 571
Query: 121 QNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVA 180
N I +L +L ++DL + ++ LP +VF N L++L+L +N LI
Sbjct: 572 SNGF-DEIP-VEAFKDLRELKSIDLGMNNLNILPQSVFDNQVSLKSLSLQKN-LITSVQK 628
Query: 181 TTLGQNLVHLDSLDL 195
T G +L LD+
Sbjct: 629 TVFGPAFRNLSYLDM 643
Score = 43 (20.2 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 9/17 (52%), Positives = 12/17 (70%)
Query: 631 YINMEKLNSKSFLTLGN 647
Y N+E L+S+SF L N
Sbjct: 308 YNNIEHLSSRSFYGLSN 324
>UNIPROTKB|A6QLV3 [details] [associations]
symbol:SHOC2 "Leucine-rich repeat protein SHOC-2"
species:9913 "Bos taurus" [GO:0019903 "protein phosphatase binding"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0000164 "protein phosphatase type 1
complex" evidence=ISS] [GO:0046579 "positive regulation of Ras
protein signal transduction" evidence=ISS] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR027036 PROSITE:PS51450 GO:GO:0005634
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875
Pfam:PF12799 GO:GO:0046579 GO:GO:0019903 GO:GO:0000164
HOGENOM:HOG000116557 GeneTree:ENSGT00600000084236 EMBL:BC148097
IPI:IPI00729412 RefSeq:NP_001095413.1 UniGene:Bt.72530
ProteinModelPortal:A6QLV3 PRIDE:A6QLV3 Ensembl:ENSBTAT00000010138
GeneID:511417 KEGG:bta:511417 CTD:8036 HOVERGEN:HBG055661
InParanoid:A6QLV3 OMA:LPHGIGN OrthoDB:EOG408N7W NextBio:20869918
ArrayExpress:A6QLV3 PANTHER:PTHR23155:SF38 Uniprot:A6QLV3
Length = 582
Score = 291 (107.5 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 140/461 (30%), Positives = 204/461 (44%)
Query: 19 LITINLNANPIQ--PVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPL 76
L + L +N +Q P E LV +L+ L + E +L+ + P NL L LDL N L
Sbjct: 125 LTELYLYSNKLQSLPAEVGCLV--NLMTLALSENSLTSL-PDSLDNLKKLRMLDLRHNKL 181
Query: 77 RIIEPGVF--DPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVL 134
R I V+ D LT+L YL NR +T + NL+ L L + +NK+K +
Sbjct: 182 REIPSVVYRLDSLTTL-YLRFNR--ITTVEKD-IKNLSKLSMLSIRENKIKQ---LPAEI 234
Query: 135 GNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLD 194
G L L TLD+ + + +LP + N T + NL+L NEL+DL T+G NL L L
Sbjct: 235 GELCNLITLDVAHNQLEHLPKEI-GNCTQITNLDLQHNELLDLP--DTIG-NLSSLSRLG 290
Query: 195 LSNCHLKG-PLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSL-RNCGLSR 252
L L P S + L L L N +S S+ L L KL+ L+L RNC
Sbjct: 291 LRYNRLSAIPRS---LAKCSALEELNLENNNISTLPESL-LSSLVKLNSLTLARNC-FQL 345
Query: 253 LPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSL 312
P +F+ + L++ HN + + S + L L+M + L + F TS+
Sbjct: 346 YPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLD-FGTWTSM 404
Query: 313 KTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFH-ENYTYPDLEELRLSGN 371
L L+ N+L + + L L VL L+N L +L + + DLEE +L
Sbjct: 405 VELNLATNQLTKIPEDV-SGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESL 463
Query: 372 PLHV--LPDSTK----QYSMRTIPTQIWKNFDFLVILFILNETVFH---ENYTYPDLEEL 422
P + L D K + T+P I + L L + + H E T +LEEL
Sbjct: 464 PNEIAYLKDLQKLVLTNNQLTTLPRGIG-HLTNLTHLGLGENLLTHLPEEIGTLENLEEL 522
Query: 423 RLSGNP-LHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNV 462
L+ NP LH LP C + +LPP +
Sbjct: 523 YLNDNPNLHSLP---FELALCSKLSIMSIENCPLSHLPPQI 560
Score = 228 (85.3 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 110/394 (27%), Positives = 181/394 (45%)
Query: 55 INPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHL 114
I P LT L +L L N L+ + P L +L L L+ +LT + P + DNL L
Sbjct: 114 ILPSSIKELTQLTELYLYSNKLQSL-PAEVGCLVNLMTLALSENSLTSL-PDSLDNLKKL 171
Query: 115 KTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENEL 174
+ L+L NKL+ + V+ L L TL LR + I+ + ++ N + L L++ EN++
Sbjct: 172 RMLDLRHNKLR---EIPSVVYRLDSLTTLYLRFNRITTVEKDI-KNLSKLSMLSIRENKI 227
Query: 175 IDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVAL 234
L +G+ L +L +LD+++ L+ E N T++ L L N L DL +
Sbjct: 228 KQLPAE--IGE-LCNLITLDVAHNQLEHLPKEIG--NCTQITNLDLQHNEL--LDLPDTI 280
Query: 235 KPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMG 294
L+ L RL LR LS +P + + + L+EL++ +N + +LLS L L L +
Sbjct: 281 GNLSSLSRLGLRYNRLSAIP-RSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLA 339
Query: 295 YSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVF 354
+ Q + +++ +L + N++ + G+F LS L + + LT L F
Sbjct: 340 RNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSL-PLDF 398
Query: 355 HENYTYPDLEELRLSGNPLHVLPDSTK---QYSMRTIPTQIWKNFDF-LVILFILNETVF 410
T+ + EL L+ N L +P+ + + + K L L L E
Sbjct: 399 G---TWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDL 455
Query: 411 HENY--TYP-------DLEELRLSGNPLHVLPTG 435
EN + P DL++L L+ N L LP G
Sbjct: 456 EENKLESLPNEIAYLKDLQKLVLTNNQLTTLPRG 489
Score = 186 (70.5 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 104/392 (26%), Positives = 162/392 (41%)
Query: 102 YISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANN 161
+I PS+ L L L L NKL+S +G L L TL L ++ +++LPD++ N
Sbjct: 113 HILPSSIKELTQLTELYLYSNKLQS---LPAEVGCLVNLMTLALSENSLTSLPDSL-DNL 168
Query: 162 TWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLS-EDAFVNATKLRTLYL 220
LR L+L N+L ++ + LDSL + E N +KL L +
Sbjct: 169 KKLRMLDLRHNKLREIPSV------VYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSI 222
Query: 221 SGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTA 280
N + L + L L L + + L LP T + LD+ HN L+D
Sbjct: 223 RENKIK--QLPAEIGELCNLITLDVAHNQLEHLPKE-IGNCTQITNLDLQHNELLD-LPD 278
Query: 281 LLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLE 340
+ L SL L + Y+ L I RS K ++L+ L L N + TL L +L L+ L
Sbjct: 279 TIGNLSSLSRLGLRYNRLSAIPRS-LAKCSALEELNLENNNISTLPESLLSSLVKLNSLT 337
Query: 341 L-NNC-GLTRLN-ETVFHENYTYPDLEELRLSGNPLHVLPDST-------KQYSMRTIPT 390
L NC L + + F Y+ ++E R++ P + + K + ++P
Sbjct: 338 LARNCFQLYPVGGPSQFSTIYSL-NMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPL 396
Query: 391 QIWKNFDFLVILFILNE-TVFHENYT-YPDLEELRLSGNPLHVLPTGNXXXXXXXXXXXX 448
+ + N+ T E+ + LE L LS N L LP G
Sbjct: 397 DFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLE 456
Query: 449 XXXXCKIDYLPPNVFNNTRNITSLNLANNNLS 480
K++ LP N +++ L L NN L+
Sbjct: 457 EN---KLESLP-NEIAYLKDLQKLVLTNNQLT 484
>UNIPROTKB|Q9UQ13 [details] [associations]
symbol:SHOC2 "Leucine-rich repeat protein SHOC-2"
species:9606 "Homo sapiens" [GO:0008543 "fibroblast growth factor
receptor signaling pathway" evidence=NAS] [GO:0005737 "cytoplasm"
evidence=IDA;NAS] [GO:0007265 "Ras protein signal transduction"
evidence=NAS] [GO:0019888 "protein phosphatase regulator activity"
evidence=TAS] [GO:0019903 "protein phosphatase binding"
evidence=IDA] [GO:0046579 "positive regulation of Ras protein
signal transduction" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0000164 "protein phosphatase type 1 complex"
evidence=IDA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR027036
PROSITE:PS51450 GO:GO:0005634 GO:GO:0008543 GO:GO:0007265
GO:GO:0019888 EMBL:CH471066 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 EMBL:AL158163 InterPro:IPR025875 Pfam:PF12799
GO:GO:0046579 GO:GO:0019903 GO:GO:0000164 HOGENOM:HOG000116557
CTD:8036 HOVERGEN:HBG055661 OMA:LPHGIGN OrthoDB:EOG408N7W
PANTHER:PTHR23155:SF38 EMBL:AF068920 EMBL:AF054828 EMBL:AB020669
EMBL:AK090820 EMBL:AK292833 EMBL:BC050445 IPI:IPI00298928
IPI:IPI00479890 RefSeq:NP_001255968.1 RefSeq:NP_031399.2
UniGene:Hs.104315 ProteinModelPortal:Q9UQ13 SMR:Q9UQ13
IntAct:Q9UQ13 STRING:Q9UQ13 PhosphoSite:Q9UQ13 DMDM:14423936
PaxDb:Q9UQ13 PeptideAtlas:Q9UQ13 PRIDE:Q9UQ13
Ensembl:ENST00000265277 Ensembl:ENST00000369452
Ensembl:ENST00000451838 GeneID:8036 KEGG:hsa:8036 UCSC:uc001kzl.4
UCSC:uc001kzn.3 GeneCards:GC10P112679 HGNC:HGNC:15454 HPA:HPA009164
MIM:602775 MIM:607721 neXtProt:NX_Q9UQ13 Orphanet:2701
PharmGKB:PA37960 InParanoid:Q9UQ13 PhylomeDB:Q9UQ13 ChiTaRS:SHOC2
GenomeRNAi:8036 NextBio:30623 Bgee:Q9UQ13 CleanEx:HS_SHOC2
Genevestigator:Q9UQ13 GermOnline:ENSG00000108061 Uniprot:Q9UQ13
Length = 582
Score = 291 (107.5 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 140/461 (30%), Positives = 204/461 (44%)
Query: 19 LITINLNANPIQ--PVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPL 76
L + L +N +Q P E LV +L+ L + E +L+ + P NL L LDL N L
Sbjct: 125 LTELYLYSNKLQSLPAEVGCLV--NLMTLALSENSLTSL-PDSLDNLKKLRMLDLRHNKL 181
Query: 77 RIIEPGVF--DPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVL 134
R I V+ D LT+L YL NR +T + NL+ L L + +NK+K +
Sbjct: 182 REIPSVVYRLDSLTTL-YLRFNR--ITTVEKD-IKNLSKLSMLSIRENKIKQ---LPAEI 234
Query: 135 GNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLD 194
G L L TLD+ + + +LP + N T + NL+L NEL+DL T+G NL L L
Sbjct: 235 GELCNLITLDVAHNQLEHLPKEI-GNCTQITNLDLQHNELLDLP--DTIG-NLSSLSRLG 290
Query: 195 LSNCHLKG-PLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSL-RNCGLSR 252
L L P S + L L L N +S S+ L L KL+ L+L RNC
Sbjct: 291 LRYNRLSAIPRS---LAKCSALEELNLENNNISTLPESL-LSSLVKLNSLTLARNC-FQL 345
Query: 253 LPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSL 312
P +F+ + L++ HN + + S + L L+M + L + F TS+
Sbjct: 346 YPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLD-FGTWTSM 404
Query: 313 KTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFH-ENYTYPDLEELRLSGN 371
L L+ N+L + + L L VL L+N L +L + + DLEE +L
Sbjct: 405 VELNLATNQLTKIPEDV-SGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESL 463
Query: 372 PLHV--LPDSTK----QYSMRTIPTQIWKNFDFLVILFILNETVFH---ENYTYPDLEEL 422
P + L D K + T+P I + L L + + H E T +LEEL
Sbjct: 464 PNEIAYLKDLQKLVLTNNQLTTLPRGIG-HLTNLTHLGLGENLLTHLPEEIGTLENLEEL 522
Query: 423 RLSGNP-LHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNV 462
L+ NP LH LP C + +LPP +
Sbjct: 523 YLNDNPNLHSLP---FELALCSKLSIMSIENCPLSHLPPQI 560
Score = 228 (85.3 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 110/394 (27%), Positives = 181/394 (45%)
Query: 55 INPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHL 114
I P LT L +L L N L+ + P L +L L L+ +LT + P + DNL L
Sbjct: 114 ILPSSIKELTQLTELYLYSNKLQSL-PAEVGCLVNLMTLALSENSLTSL-PDSLDNLKKL 171
Query: 115 KTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENEL 174
+ L+L NKL+ + V+ L L TL LR + I+ + ++ N + L L++ EN++
Sbjct: 172 RMLDLRHNKLR---EIPSVVYRLDSLTTLYLRFNRITTVEKDI-KNLSKLSMLSIRENKI 227
Query: 175 IDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVAL 234
L +G+ L +L +LD+++ L+ E N T++ L L N L DL +
Sbjct: 228 KQLPAE--IGE-LCNLITLDVAHNQLEHLPKEIG--NCTQITNLDLQHNEL--LDLPDTI 280
Query: 235 KPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMG 294
L+ L RL LR LS +P + + + L+EL++ +N + +LLS L L L +
Sbjct: 281 GNLSSLSRLGLRYNRLSAIP-RSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLA 339
Query: 295 YSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVF 354
+ Q + +++ +L + N++ + G+F LS L + + LT L F
Sbjct: 340 RNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSL-PLDF 398
Query: 355 HENYTYPDLEELRLSGNPLHVLPDSTK---QYSMRTIPTQIWKNFDF-LVILFILNETVF 410
T+ + EL L+ N L +P+ + + + K L L L E
Sbjct: 399 G---TWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDL 455
Query: 411 HENY--TYP-------DLEELRLSGNPLHVLPTG 435
EN + P DL++L L+ N L LP G
Sbjct: 456 EENKLESLPNEIAYLKDLQKLVLTNNQLTTLPRG 489
Score = 186 (70.5 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 104/392 (26%), Positives = 162/392 (41%)
Query: 102 YISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANN 161
+I PS+ L L L L NKL+S +G L L TL L ++ +++LPD++ N
Sbjct: 113 HILPSSIKELTQLTELYLYSNKLQS---LPAEVGCLVNLMTLALSENSLTSLPDSL-DNL 168
Query: 162 TWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLS-EDAFVNATKLRTLYL 220
LR L+L N+L ++ + LDSL + E N +KL L +
Sbjct: 169 KKLRMLDLRHNKLREIPSV------VYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSI 222
Query: 221 SGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTA 280
N + L + L L L + + L LP T + LD+ HN L+D
Sbjct: 223 RENKIK--QLPAEIGELCNLITLDVAHNQLEHLPKE-IGNCTQITNLDLQHNELLD-LPD 278
Query: 281 LLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLE 340
+ L SL L + Y+ L I RS K ++L+ L L N + TL L +L L+ L
Sbjct: 279 TIGNLSSLSRLGLRYNRLSAIPRS-LAKCSALEELNLENNNISTLPESLLSSLVKLNSLT 337
Query: 341 L-NNC-GLTRLN-ETVFHENYTYPDLEELRLSGNPLHVLPDST-------KQYSMRTIPT 390
L NC L + + F Y+ ++E R++ P + + K + ++P
Sbjct: 338 LARNCFQLYPVGGPSQFSTIYSL-NMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPL 396
Query: 391 QIWKNFDFLVILFILNE-TVFHENYT-YPDLEELRLSGNPLHVLPTGNXXXXXXXXXXXX 448
+ + N+ T E+ + LE L LS N L LP G
Sbjct: 397 DFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLE 456
Query: 449 XXXXCKIDYLPPNVFNNTRNITSLNLANNNLS 480
K++ LP N +++ L L NN L+
Sbjct: 457 EN---KLESLP-NEIAYLKDLQKLVLTNNQLT 484
>UNIPROTKB|F2Z5G0 [details] [associations]
symbol:SHOC2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046579 "positive regulation of Ras protein signal
transduction" evidence=IEA] [GO:0019903 "protein phosphatase
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000164 "protein phosphatase type 1 complex" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR027036 PROSITE:PS51450
GO:GO:0005634 InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875
Pfam:PF12799 GO:GO:0046579 GO:GO:0000164
GeneTree:ENSGT00600000084236 CTD:8036 OMA:LPHGIGN
PANTHER:PTHR23155:SF38 EMBL:CT737336 RefSeq:XP_001927528.1
UniGene:Ssc.83770 ProteinModelPortal:F2Z5G0 SMR:F2Z5G0 PRIDE:F2Z5G0
Ensembl:ENSSSCT00000011624 GeneID:100155918 KEGG:ssc:100155918
Uniprot:F2Z5G0
Length = 582
Score = 291 (107.5 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 140/461 (30%), Positives = 204/461 (44%)
Query: 19 LITINLNANPIQ--PVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPL 76
L + L +N +Q P E LV +L+ L + E +L+ + P NL L LDL N L
Sbjct: 125 LTELYLYSNKLQSLPAEVGCLV--NLMTLALSENSLTSL-PDSLDNLKKLRMLDLRHNKL 181
Query: 77 RIIEPGVF--DPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVL 134
R I V+ D LT+L YL NR +T + NL+ L L + +NK+K +
Sbjct: 182 REIPSVVYRLDSLTTL-YLRFNR--ITTVEKD-IKNLSKLSMLSIRENKIKQ---LPAEI 234
Query: 135 GNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLD 194
G L L TLD+ + + +LP + N T + NL+L NEL+DL T+G NL L L
Sbjct: 235 GELCNLITLDVAHNQLEHLPKEI-GNCTQITNLDLQHNELLDLP--DTIG-NLSSLSRLG 290
Query: 195 LSNCHLKG-PLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSL-RNCGLSR 252
L L P S + L L L N +S S+ L L KL+ L+L RNC
Sbjct: 291 LRYNRLSAIPRS---LAKCSALEELNLENNNISTLPESL-LSSLVKLNSLTLARNC-FQL 345
Query: 253 LPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSL 312
P +F+ + L++ HN + + S + L L+M + L + F TS+
Sbjct: 346 YPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLD-FGTWTSM 404
Query: 313 KTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFH-ENYTYPDLEELRLSGN 371
L L+ N+L + + L L VL L+N L +L + + DLEE +L
Sbjct: 405 VELNLATNQLTKIPEDV-SGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESL 463
Query: 372 PLHV--LPDSTK----QYSMRTIPTQIWKNFDFLVILFILNETVFH---ENYTYPDLEEL 422
P + L D K + T+P I + L L + + H E T +LEEL
Sbjct: 464 PNEIAYLKDLQKLVLTNNQLTTLPRGIG-HLTNLTHLGLGENLLTHLPEEIGTLENLEEL 522
Query: 423 RLSGNP-LHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNV 462
L+ NP LH LP C + +LPP +
Sbjct: 523 YLNDNPNLHSLP---FELALCSKLSIMSIENCPLSHLPPQI 560
Score = 228 (85.3 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 110/394 (27%), Positives = 181/394 (45%)
Query: 55 INPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHL 114
I P LT L +L L N L+ + P L +L L L+ +LT + P + DNL L
Sbjct: 114 ILPSSIKELTQLTELYLYSNKLQSL-PAEVGCLVNLMTLALSENSLTSL-PDSLDNLKKL 171
Query: 115 KTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENEL 174
+ L+L NKL+ + V+ L L TL LR + I+ + ++ N + L L++ EN++
Sbjct: 172 RMLDLRHNKLR---EIPSVVYRLDSLTTLYLRFNRITTVEKDI-KNLSKLSMLSIRENKI 227
Query: 175 IDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVAL 234
L +G+ L +L +LD+++ L+ E N T++ L L N L DL +
Sbjct: 228 KQLPAE--IGE-LCNLITLDVAHNQLEHLPKEIG--NCTQITNLDLQHNEL--LDLPDTI 280
Query: 235 KPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMG 294
L+ L RL LR LS +P + + + L+EL++ +N + +LLS L L L +
Sbjct: 281 GNLSSLSRLGLRYNRLSAIP-RSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLA 339
Query: 295 YSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVF 354
+ Q + +++ +L + N++ + G+F LS L + + LT L F
Sbjct: 340 RNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSL-PLDF 398
Query: 355 HENYTYPDLEELRLSGNPLHVLPDSTK---QYSMRTIPTQIWKNFDF-LVILFILNETVF 410
T+ + EL L+ N L +P+ + + + K L L L E
Sbjct: 399 G---TWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDL 455
Query: 411 HENY--TYP-------DLEELRLSGNPLHVLPTG 435
EN + P DL++L L+ N L LP G
Sbjct: 456 EENKLESLPNEIAYLKDLQKLVLTNNQLTTLPRG 489
Score = 186 (70.5 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 104/392 (26%), Positives = 162/392 (41%)
Query: 102 YISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANN 161
+I PS+ L L L L NKL+S +G L L TL L ++ +++LPD++ N
Sbjct: 113 HILPSSIKELTQLTELYLYSNKLQS---LPAEVGCLVNLMTLALSENSLTSLPDSL-DNL 168
Query: 162 TWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLS-EDAFVNATKLRTLYL 220
LR L+L N+L ++ + LDSL + E N +KL L +
Sbjct: 169 KKLRMLDLRHNKLREIPSV------VYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSI 222
Query: 221 SGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTA 280
N + L + L L L + + L LP T + LD+ HN L+D
Sbjct: 223 RENKIK--QLPAEIGELCNLITLDVAHNQLEHLPKE-IGNCTQITNLDLQHNELLD-LPD 278
Query: 281 LLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLE 340
+ L SL L + Y+ L I RS K ++L+ L L N + TL L +L L+ L
Sbjct: 279 TIGNLSSLSRLGLRYNRLSAIPRS-LAKCSALEELNLENNNISTLPESLLSSLVKLNSLT 337
Query: 341 L-NNC-GLTRLN-ETVFHENYTYPDLEELRLSGNPLHVLPDST-------KQYSMRTIPT 390
L NC L + + F Y+ ++E R++ P + + K + ++P
Sbjct: 338 LARNCFQLYPVGGPSQFSTIYSL-NMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPL 396
Query: 391 QIWKNFDFLVILFILNE-TVFHENYT-YPDLEELRLSGNPLHVLPTGNXXXXXXXXXXXX 448
+ + N+ T E+ + LE L LS N L LP G
Sbjct: 397 DFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLE 456
Query: 449 XXXXCKIDYLPPNVFNNTRNITSLNLANNNLS 480
K++ LP N +++ L L NN L+
Sbjct: 457 EN---KLESLP-NEIAYLKDLQKLVLTNNQLT 484
>UNIPROTKB|Q5RAV5 [details] [associations]
symbol:SHOC2 "Leucine-rich repeat protein SHOC-2"
species:9601 "Pongo abelii" [GO:0000164 "protein phosphatase type 1
complex" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0019903 "protein
phosphatase binding" evidence=ISS] [GO:0046579 "positive regulation
of Ras protein signal transduction" evidence=ISS] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR027036 PROSITE:PS51450 GO:GO:0005634
InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875 Pfam:PF12799
GO:GO:0046579 GO:GO:0019903 GO:GO:0000164 HSSP:P07359
HOGENOM:HOG000116557 GeneTree:ENSGT00600000084236 CTD:8036
HOVERGEN:HBG055661 OMA:LPHGIGN PANTHER:PTHR23155:SF38 EMBL:CR858906
EMBL:CR860532 EMBL:CR860795 EMBL:CR861437 RefSeq:NP_001126707.1
RefSeq:NP_001128872.1 UniGene:Pab.17963 UniGene:Pab.19685
ProteinModelPortal:Q5RAV5 SMR:Q5RAV5 PRIDE:Q5RAV5
Ensembl:ENSPPYT00000003192 GeneID:100173707 GeneID:100189801
KEGG:pon:100173707 KEGG:pon:100189801 InParanoid:Q5R5R1
Uniprot:Q5RAV5
Length = 582
Score = 291 (107.5 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 140/461 (30%), Positives = 204/461 (44%)
Query: 19 LITINLNANPIQ--PVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPL 76
L + L +N +Q P E LV +L+ L + E +L+ + P NL L LDL N L
Sbjct: 125 LTELYLYSNKLQSLPAEVGCLV--NLMTLALSENSLTSL-PDSLDNLKKLRMLDLRHNKL 181
Query: 77 RIIEPGVF--DPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVL 134
R I V+ D LT+L YL NR +T + NL+ L L + +NK+K +
Sbjct: 182 REIPSVVYRLDSLTTL-YLRFNR--ITTVEKD-IKNLSKLSMLSIRENKIKQ---LPAEI 234
Query: 135 GNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLD 194
G L L TLD+ + + +LP + N T + NL+L NEL+DL T+G NL L L
Sbjct: 235 GELCNLITLDVAHNQLEHLPKEI-GNCTQITNLDLQHNELLDLP--DTIG-NLSSLSRLG 290
Query: 195 LSNCHLKG-PLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSL-RNCGLSR 252
L L P S + L L L N +S S+ L L KL+ L+L RNC
Sbjct: 291 LRYNRLSAIPRS---LAKCSALEELNLENNNISTLPESL-LSSLVKLNSLTLARNC-FQL 345
Query: 253 LPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSL 312
P +F+ + L++ HN + + S + L L+M + L + F TS+
Sbjct: 346 YPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLD-FGTWTSM 404
Query: 313 KTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFH-ENYTYPDLEELRLSGN 371
L L+ N+L + + L L VL L+N L +L + + DLEE +L
Sbjct: 405 VELNLATNQLTKIPEDV-SGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESL 463
Query: 372 PLHV--LPDSTK----QYSMRTIPTQIWKNFDFLVILFILNETVFH---ENYTYPDLEEL 422
P + L D K + T+P I + L L + + H E T +LEEL
Sbjct: 464 PNEIAYLKDLQKLVLTNNQLTTLPRGIG-HLTNLTHLGLGENLLTHLPEEIGTLENLEEL 522
Query: 423 RLSGNP-LHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNV 462
L+ NP LH LP C + +LPP +
Sbjct: 523 YLNDNPNLHSLP---FELALCSKLSIMSIENCPLSHLPPQI 560
Score = 228 (85.3 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 110/394 (27%), Positives = 181/394 (45%)
Query: 55 INPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHL 114
I P LT L +L L N L+ + P L +L L L+ +LT + P + DNL L
Sbjct: 114 ILPSSIKELTQLTELYLYSNKLQSL-PAEVGCLVNLMTLALSENSLTSL-PDSLDNLKKL 171
Query: 115 KTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENEL 174
+ L+L NKL+ + V+ L L TL LR + I+ + ++ N + L L++ EN++
Sbjct: 172 RMLDLRHNKLR---EIPSVVYRLDSLTTLYLRFNRITTVEKDI-KNLSKLSMLSIRENKI 227
Query: 175 IDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVAL 234
L +G+ L +L +LD+++ L+ E N T++ L L N L DL +
Sbjct: 228 KQLPAE--IGE-LCNLITLDVAHNQLEHLPKEIG--NCTQITNLDLQHNEL--LDLPDTI 280
Query: 235 KPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMG 294
L+ L RL LR LS +P + + + L+EL++ +N + +LLS L L L +
Sbjct: 281 GNLSSLSRLGLRYNRLSAIP-RSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLA 339
Query: 295 YSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVF 354
+ Q + +++ +L + N++ + G+F LS L + + LT L F
Sbjct: 340 RNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSL-PLDF 398
Query: 355 HENYTYPDLEELRLSGNPLHVLPDSTK---QYSMRTIPTQIWKNFDF-LVILFILNETVF 410
T+ + EL L+ N L +P+ + + + K L L L E
Sbjct: 399 G---TWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDL 455
Query: 411 HENY--TYP-------DLEELRLSGNPLHVLPTG 435
EN + P DL++L L+ N L LP G
Sbjct: 456 EENKLESLPNEIAYLKDLQKLVLTNNQLTTLPRG 489
Score = 186 (70.5 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 104/392 (26%), Positives = 162/392 (41%)
Query: 102 YISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANN 161
+I PS+ L L L L NKL+S +G L L TL L ++ +++LPD++ N
Sbjct: 113 HILPSSIKELTQLTELYLYSNKLQS---LPAEVGCLVNLMTLALSENSLTSLPDSL-DNL 168
Query: 162 TWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLS-EDAFVNATKLRTLYL 220
LR L+L N+L ++ + LDSL + E N +KL L +
Sbjct: 169 KKLRMLDLRHNKLREIPSV------VYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSI 222
Query: 221 SGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTA 280
N + L + L L L + + L LP T + LD+ HN L+D
Sbjct: 223 RENKIK--QLPAEIGELCNLITLDVAHNQLEHLPKE-IGNCTQITNLDLQHNELLD-LPD 278
Query: 281 LLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLE 340
+ L SL L + Y+ L I RS K ++L+ L L N + TL L +L L+ L
Sbjct: 279 TIGNLSSLSRLGLRYNRLSAIPRS-LAKCSALEELNLENNNISTLPESLLSSLVKLNSLT 337
Query: 341 L-NNC-GLTRLN-ETVFHENYTYPDLEELRLSGNPLHVLPDST-------KQYSMRTIPT 390
L NC L + + F Y+ ++E R++ P + + K + ++P
Sbjct: 338 LARNCFQLYPVGGPSQFSTIYSL-NMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPL 396
Query: 391 QIWKNFDFLVILFILNE-TVFHENYT-YPDLEELRLSGNPLHVLPTGNXXXXXXXXXXXX 448
+ + N+ T E+ + LE L LS N L LP G
Sbjct: 397 DFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLE 456
Query: 449 XXXXCKIDYLPPNVFNNTRNITSLNLANNNLS 480
K++ LP N +++ L L NN L+
Sbjct: 457 EN---KLESLP-NEIAYLKDLQKLVLTNNQLT 484
>MGI|MGI:1919006 [details] [associations]
symbol:Cpn2 "carboxypeptidase N, polypeptide 2"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 MGI:MGI:1919006 GO:GO:0005576 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
CTD:1370 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 HOGENOM:HOG000294123
HOVERGEN:HBG050814 KO:K13023 OMA:WQCDCHL OrthoDB:EOG4WM4TF
EMBL:AK005049 EMBL:BC025836 EMBL:BC138287 EMBL:BC138288
IPI:IPI00119522 RefSeq:NP_082180.2 UniGene:Mm.290614
ProteinModelPortal:Q9DBB9 SMR:Q9DBB9 STRING:Q9DBB9 PaxDb:Q9DBB9
PRIDE:Q9DBB9 Ensembl:ENSMUST00000064856 GeneID:71756 KEGG:mmu:71756
UCSC:uc007ywm.1 GeneTree:ENSGT00700000104286 InParanoid:B2RR89
NextBio:334421 Bgee:Q9DBB9 CleanEx:MM_CPN2 Genevestigator:Q9DBB9
GermOnline:ENSMUSG00000023176 Uniprot:Q9DBB9
Length = 547
Score = 288 (106.4 bits), Expect = 2.8e-22, P = 2.8e-22
Identities = 98/330 (29%), Positives = 157/330 (47%)
Query: 49 ECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAF 108
E + + + F+ L K+ +R +EP F L L+ L + ++ +S F
Sbjct: 58 ETAFTTVRTRAFSGSPNLTKVVFLNTQVRHLEPDAFGGLPRLQDLEITGSPVSNLSAHIF 117
Query: 109 DNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLN 168
NL+ L+ L L ++L + L ++ L++L L+ + + LP +F + LR LN
Sbjct: 118 SNLSSLEKLTLDFDRLAG-LPEDLFC-HMDILESLQLQGNQLRTLPGRLFQSLRDLRTLN 175
Query: 169 LAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAA 228
LA+N L L Q+L L L LSN ++ L E A + + L+ L+L GN ++
Sbjct: 176 LAQNLLTQLPKGAF--QSLTGLQMLKLSN-NMLARLPEGALGSLSSLQELFLDGNAIT-- 230
Query: 229 DLSVAL-KPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLES 287
+LS L L L L L++ + LP + F L L + N L L + +
Sbjct: 231 ELSPHLFSQLFSLEMLWLQHNAICHLPVSLFSSLHNLTFLSLKDNALRTLPEGLFAHNQG 290
Query: 288 LEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLT 347
L HL + Y+ L+ I F ++ L +L LS N + L +F+NL L L L++ LT
Sbjct: 291 LLHLSLSYNQLETIPEGAFTNLSRLVSLTLSHNAITDLPEHVFRNLEQLVKLSLDSNNLT 350
Query: 348 RLNETVFHENYTYPDLEELRLSGNPLHVLP 377
L+ +FH N + L+ L LS N L LP
Sbjct: 351 ALHPALFH-NLSR--LQLLNLSRNQLTTLP 377
Score = 274 (101.5 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 99/338 (29%), Positives = 153/338 (45%)
Query: 35 AFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLM 94
AF + +L + + + P F L L L+++G+P+ + +F L+SLE L
Sbjct: 68 AFSGSPNLTKVVFLNTQVRHLEPDAFGGLPRLQDLEITGSPVSNLSAHIFSNLSSLEKLT 127
Query: 95 LNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLP 154
L+ L + F +++ L++L+L N+L++ + L +L L TL+L Q+ ++ LP
Sbjct: 128 LDFDRLAGLPEDLFCHMDILESLQLQGNQLRT-LPGRL-FQSLRDLRTLNLAQNLLTQLP 185
Query: 155 DNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATK 214
F + T L+ L L+ N L L LG +L L L L + LS F
Sbjct: 186 KGAFQSLTGLQMLKLSNNMLARLPEGA-LG-SLSSLQELFLDGNAIT-ELSPHLFSQLFS 242
Query: 215 LRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPL 274
L L+L N + +S+ L L LSL++ L LP F L L +S+N L
Sbjct: 243 LEMLWLQHNAICHLPVSL-FSSLHNLTFLSLKDNALRTLPEGLFAHNQGLLHLSLSYNQL 301
Query: 275 IDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLT 334
+ L L L + ++ + + F + L L L N L L LF NL+
Sbjct: 302 ETIPEGAFTNLSRLVSLTLSHNAITDLPEHVFRNLEQLVKLSLDSNNLTALHPALFHNLS 361
Query: 335 HLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNP 372
L +L L+ LT L +F NY DL L L GNP
Sbjct: 362 RLQLLNLSRNQLTTLPGGIFDTNY---DLFNLALLGNP 396
Score = 219 (82.2 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 86/325 (26%), Positives = 135/325 (41%)
Query: 237 LTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYS 296
L +L L + +S L A+ F + L++L + + L L ++ LE L + +
Sbjct: 96 LPRLQDLEITGSPVSNLSAHIFSNLSSLEKLTLDFDRLAGLPEDLFCHMDILESLQLQGN 155
Query: 297 NLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHE 356
L+ + F + L+TL L+ N L L G FQ+LT L +L+L+N L RL E
Sbjct: 156 QLRTLPGRLFQSLRDLRTLNLAQNLLTQLPKGAFQSLTGLQMLKLSNNMLARLPEGALG- 214
Query: 357 NYTYPDLEELRLSGNPLHVL-PDSTKQ-YSMRTI----------PTQIWK---NFDFLVI 401
+ L+EL L GN + L P Q +S+ + P ++ N FL +
Sbjct: 215 --SLSSLQELFLDGNAITELSPHLFSQLFSLEMLWLQHNAICHLPVSLFSSLHNLTFLSL 272
Query: 402 ----LFILNETVFHENYTYPDLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDY 457
L L E +F N L L LS N L +P G I
Sbjct: 273 KDNALRTLPEGLFAHNQ---GLLHLSLSYNQLETIPEGAFTNLSRLVSLTLSHNA--ITD 327
Query: 458 LPPNVFNNTRNITSLNLANNNLSMTSELSFQFXXXXXXXXXXXXXXXXXTHISPTVLRHN 517
LP +VF N + L+L +NNL+ F T + + N
Sbjct: 328 LPEHVFRNLEQLVKLSLDSNNLTALHPALFH---NLSRLQLLNLSRNQLTTLPGGIFDTN 384
Query: 518 RAITSIKLVGNPWKCDCNIADMWEW 542
+ ++ L+GNPW+CDC+++ + W
Sbjct: 385 YDLFNLALLGNPWQCDCHLSYLTSW 409
Score = 184 (69.8 bits), Expect = 8.6e-11, P = 8.6e-11
Identities = 64/209 (30%), Positives = 103/209 (49%)
Query: 19 LITINLNANPI-QPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLR 77
L T+NL N + Q +GAF L L + L+++ +L++L +L L GN +
Sbjct: 171 LRTLNLAQNLLTQLPKGAFQSLTGLQMLKLSNNMLARLPEGALGSLSSLQELFLDGNAIT 230
Query: 78 IIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNL 137
+ P +F L SLE L L + ++ S F +L++L L L N L++ + L N
Sbjct: 231 ELSPHLFSQLFSLEMLWLQHNAICHLPVSLFSSLHNLTFLSLKDNALRT-LPEGLFAHNQ 289
Query: 138 GKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSN 197
G L L L + + +P+ F N + L +L L+ N + DL + +NL L L L +
Sbjct: 290 GLLH-LSLSYNQLETIPEGAFTNLSRLVSLTLSHNAITDLP--EHVFRNLEQLVKLSLDS 346
Query: 198 CHLKGPLSEDAFVNATKLRTLYLSGNPLS 226
+L L F N ++L+ L LS N L+
Sbjct: 347 NNLTA-LHPALFHNLSRLQLLNLSRNQLT 374
Score = 167 (63.8 bits), Expect = 6.2e-09, P = 6.2e-09
Identities = 68/265 (25%), Positives = 116/265 (43%)
Query: 240 LHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQ 299
L ++ N + L + F LQ+L+I+ +P+ + + S L SLE L + + L
Sbjct: 75 LTKVVFLNTQVRHLEPDAFGGLPRLQDLEITGSPVSNLSAHIFSNLSSLEKLTLDFDRLA 134
Query: 300 RISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYT 359
+ F M L++L L GN+L TL LFQ+L L L L LT+L + F ++ T
Sbjct: 135 GLPEDLFCHMDILESLQLQGNQLRTLPGRLFQSLRDLRTLNLAQNLLTQLPKGAF-QSLT 193
Query: 360 YPDLEELRLSGNPLHVLPD------STKQY------SMRTIPTQIWKNFDFLVILFILNE 407
L+ L+LS N L LP+ S+ Q ++ + ++ L +L++ +
Sbjct: 194 --GLQMLKLSNNMLARLPEGALGSLSSLQELFLDGNAITELSPHLFSQLFSLEMLWLQHN 251
Query: 408 TVFHENYT-YPDLEELR---LSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVF 463
+ H + + L L L N L LP G +++ +P F
Sbjct: 252 AICHLPVSLFSSLHNLTFLSLKDNALRTLPEGLFAHNQGLLHLSLSYN--QLETIPEGAF 309
Query: 464 NNTRNITSLNLANNNLSMTSELSFQ 488
N + SL L++N ++ E F+
Sbjct: 310 TNLSRLVSLTLSHNAITDLPEHVFR 334
Score = 135 (52.6 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 41/112 (36%), Positives = 58/112 (51%)
Query: 13 NLDNPGLITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLS 72
+L N +++ NA P EG F + LL+L + L I FTNL+ L L LS
Sbjct: 263 SLHNLTFLSLKDNALRTLP-EGLFAHNQGLLHLSLSYNQLETIPEGAFTNLSRLVSLTLS 321
Query: 73 GNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKL 124
N + + VF L L L L+ NLT + P+ F NL+ L+ L LS+N+L
Sbjct: 322 HNAITDLPEHVFRNLEQLVKLSLDSNNLTALHPALFHNLSRLQLLNLSRNQL 373
Score = 126 (49.4 bits), Expect = 0.00018, P = 0.00018
Identities = 35/108 (32%), Positives = 53/108 (49%)
Query: 16 NPGLITINLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGN 74
N GL+ ++L+ N ++ + EGAF L+ L + ++ + F NL L KL L N
Sbjct: 288 NQGLLHLSLSYNQLETIPEGAFTNLSRLVSLTLSHNAITDLPEHVFRNLEQLVKLSLDSN 347
Query: 75 PLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQN 122
L + P +F L+ L+ L L+R LT + FD L L L N
Sbjct: 348 NLTALHPALFHNLSRLQLLNLSRNQLTTLPGGIFDTNYDLFNLALLGN 395
>RGD|68429 [details] [associations]
symbol:Igfals "insulin-like growth factor binding protein, acid
labile subunit" species:10116 "Rattus norvegicus" [GO:0005520
"insulin-like growth factor binding" evidence=IDA] [GO:0005634
"nucleus" evidence=ISO] [GO:0007155 "cell adhesion" evidence=IEA]
[GO:0007165 "signal transduction" evidence=TAS] [GO:0008022 "protein
C-terminus binding" evidence=IPI] [GO:0042567 "insulin-like growth
factor ternary complex" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 RGD:68429
GO:GO:0043231 GO:GO:0005634 GO:GO:0007165 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0007155 CTD:3483 HOGENOM:HOG000033909 HOVERGEN:HBG000327
OrthoDB:EOG4FFD1R GO:GO:0005520 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0042567 EMBL:S46785 IPI:IPI00202416 PIR:JC1282
RefSeq:NP_445781.2 UniGene:Rn.7327 ProteinModelPortal:P35859
STRING:P35859 PRIDE:P35859 GeneID:79438 KEGG:rno:79438
UCSC:RGD:68429 InParanoid:P35859 NextBio:614812 ArrayExpress:P35859
Genevestigator:P35859 GermOnline:ENSRNOG00000015061 Uniprot:P35859
Length = 603
Score = 283 (104.7 bits), Expect = 4.2e-22, Sum P(2) = 4.2e-22
Identities = 98/311 (31%), Positives = 151/311 (48%)
Query: 45 LYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYIS 104
L++ LS I F NL++L+ L+L G+ LR +EP L +L YL L R L ++
Sbjct: 79 LWLDGNNLSSIPSAAFQNLSSLDFLNLQGSWLRSLEPQALLGLQNLYYLHLERNRLRNLA 138
Query: 105 PSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWL 164
F + L +L LS N L ++ L G L L L+L + + LPD VF L
Sbjct: 139 VGLFTHTPSLASLSLSSNLL-GRLEEGLFQG-LSHLWDLNLGWNSLVVLPDTVFQGLGNL 196
Query: 165 RNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNP 224
L LA N+L L A G L L LDLS L+ + + FV+ +L+ LYL N
Sbjct: 197 HELVLAGNKLTYLQPALFCG--LGELRELDLSRNALRS-VKANVFVHLPRLQKLYLDRNL 253
Query: 225 LSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSP 284
++A L + L L L + ++ L +TF L L ++HN +
Sbjct: 254 ITAVAPGAFLG-MKALRWLDLSHNRVAGLMEDTFPGLLGLHVLRLAHNAIASLRPRTFKD 312
Query: 285 LESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELN-N 343
L LE L +G++ ++++ TF + L+ L L+ N++ + G F L +++V+ L+ N
Sbjct: 313 LHFLEELQLGHNRIRQLGERTFEGLGQLEVLTLNDNQITEVRVGAFSGLFNVAVMNLSGN 372
Query: 344 CGLTRLNETVF 354
C L L E VF
Sbjct: 373 C-LRSLPERVF 382
Score = 261 (96.9 bits), Expect = 1.3e-19, Sum P(2) = 1.3e-19
Identities = 91/303 (30%), Positives = 145/303 (47%)
Query: 52 LSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNL 111
L+ + P F L L +LDLS N LR ++ VF L L+ L L+R +T ++P AF +
Sbjct: 206 LTYLQPALFCGLGELRELDLSRNALRSVKANVFVHLPRLQKLYLDRNLITAVAPGAFLGM 265
Query: 112 NHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAE 171
L+ L+LS N++ ++ T G LG L L L + I++L F + +L L L
Sbjct: 266 KALRWLDLSHNRVAGLMEDTFP-GLLG-LHVLRLAHNAIASLRPRTFKDLHFLEELQLGH 323
Query: 172 NELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLS 231
N + L T G L L+ L L++ + + AF + + LSGN L +
Sbjct: 324 NRIRQLGERTFEG--LGQLEVLTLNDNQIT-EVRVGAFSGLFNVAVMNLSGNCLRSLPER 380
Query: 232 VALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHL 291
V + L KLH L L + L + +TF + L+ L + N + L+ L L L
Sbjct: 381 V-FQGLDKLHSLHLEHSCLGHVRLHTFAGLSGLRRLFLRDNSISSIEEQSLAGLSELLEL 439
Query: 292 DMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNE 351
D+ + L + R F + L+ L+LS N+L TL + + L L++++ L L E
Sbjct: 440 DLTTNRLTHLPRQLFQGLGHLEYLLLSYNQLTTLSAEVLGPLQRAFWLDISHNHLETLAE 499
Query: 352 TVF 354
+F
Sbjct: 500 GLF 502
Score = 237 (88.5 bits), Expect = 6.4e-17, Sum P(2) = 6.4e-17
Identities = 109/393 (27%), Positives = 169/393 (43%)
Query: 24 LNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPG 82
L+ N + + AF SL +L +Q L + PQ L L L L N LR + G
Sbjct: 81 LDGNNLSSIPSAAFQNLSSLDFLNLQGSWLRSLEPQALLGLQNLYYLHLERNRLRNLAVG 140
Query: 83 VFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDT 142
+F SL L L+ L + F L+HL L L N L D T+ G LG L
Sbjct: 141 LFTHTPSLASLSLSSNLLGRLEEGLFQGLSHLWDLNLGWNSLVVLPD-TVFQG-LGNLHE 198
Query: 143 LDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKG 202
L L + ++ L +F LR L+L+ N L V + +L L L L +L
Sbjct: 199 LVLAGNKLTYLQPALFCGLGELRELDLSRNAL--RSVKANVFVHLPRLQKLYLDR-NLIT 255
Query: 203 PLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFT 262
++ AF+ LR L LS N ++ + L LH L L + ++ L TF
Sbjct: 256 AVAPGAFLGMKALRWLDLSHNRVAGL-MEDTFPGLLGLHVLRLAHNAIASLRPRTFKDLH 314
Query: 263 CLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKL 322
L+EL + HN + L LE L + + + + F + ++ + LSGN L
Sbjct: 315 FLEELQLGHNRIRQLGERTFEGLGQLEVLTLNDNQITEVRVGAFSGLFNVAVMNLSGNCL 374
Query: 323 ETLESGLFQNLTHLSVLEL-NNC-GLTRLN--------ETVFHENYTYPDLEELRLSG-N 371
+L +FQ L L L L ++C G RL+ +F + + +EE L+G +
Sbjct: 375 RSLPERVFQGLDKLHSLHLEHSCLGHVRLHTFAGLSGLRRLFLRDNSISSIEEQSLAGLS 434
Query: 372 PLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFI 404
L L +T + + +P Q+++ L L +
Sbjct: 435 ELLELDLTTNR--LTHLPRQLFQGLGHLEYLLL 465
Score = 235 (87.8 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 98/345 (28%), Positives = 146/345 (42%)
Query: 29 IQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLT 88
+QP F L L + L + F +L L KL L N + + PG F +
Sbjct: 209 LQPA--LFCGLGELRELDLSRNALRSVKANVFVHLPRLQKLYLDRNLITAVAPGAFLGMK 266
Query: 89 SLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQS 148
+L +L L+ + + F L L L L+ N + S T +L L+ L L +
Sbjct: 267 ALRWLDLSHNRVAGLMEDTFPGLLGLHVLRLAHNAIASLRPRTFK--DLHFLEELQLGHN 324
Query: 149 GISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLS-NCHLKGPLSED 207
I L + F L L L +N++ ++ V G L ++ ++LS NC L+ L E
Sbjct: 325 RIRQLGERTFEGLGQLEVLTLNDNQITEVRVGAFSG--LFNVAVMNLSGNC-LRS-LPER 380
Query: 208 AFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQEL 267
F KL +L+L + L L L+ L RL LR+ +S + + + L EL
Sbjct: 381 VFQGLDKLHSLHLEHSCLGHVRLHT-FAGLSGLRRLFLRDNSISSIEEQSLAGLSELLEL 439
Query: 268 DISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLES 327
D++ N L L L LE+L + Y+ L +S + L +S N LETL
Sbjct: 440 DLTTNRLTHLPRQLFQGLGHLEYLLLSYNQLTTLSAEVLGPLQRAFWLDISHNHLETLAE 499
Query: 328 GLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNP 372
GLF +L + L L N L + P LE L L NP
Sbjct: 500 GLFSSLGRVRYLSLRNNSLQTFSPQ--------PGLERLWLDANP 536
Score = 234 (87.4 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 96/357 (26%), Positives = 164/357 (45%)
Query: 22 INLNANPIQPVEG-AFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIE 80
+NL + ++ +E A L ++L YL+++ L + FT+ +L L LS N L +E
Sbjct: 103 LNLQGSWLRSLEPQALLGLQNLYYLHLERNRLRNLAVGLFTHTPSLASLSLSSNLLGRLE 162
Query: 81 PGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKL 140
G+F L+ L L L +L + + F L +L L L+ NKL +++ L G LG+L
Sbjct: 163 EGLFQGLSHLWDLNLGWNSLVVLPDTVFQGLGNLHELVLAGNKL-TYLQPALFCG-LGEL 220
Query: 141 DTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHL 200
LDL ++ + ++ NVF + L+ L L N + + LG + LDLS+ +
Sbjct: 221 RELDLSRNALRSVKANVFVHLPRLQKLYLDRNLITAVAPGAFLGMKALRW--LDLSHNRV 278
Query: 201 KGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHR 260
G L ED F L L L+ N +++ K L L L L + + +L TF
Sbjct: 279 AG-LMEDTFPGLLGLHVLRLAHNAIASLRPRT-FKDLHFLEELQLGHNRIRQLGERTFEG 336
Query: 261 FTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGN 320
L+ L ++ N + + S L ++ +++ + L+ + F + L +L L +
Sbjct: 337 LGQLEVLTLNDNQITEVRVGAFSGLFNVAVMNLSGNCLRSLPERVFQGLDKLHSLHLEHS 396
Query: 321 KLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLP 377
L + F L+ L L L + ++ + E +L EL L+ N L LP
Sbjct: 397 CLGHVRLHTFAGLSGLRRLFLRDNSISSIEEQSLAG---LSELLELDLTTNRLTHLP 450
Score = 215 (80.7 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 110/411 (26%), Positives = 182/411 (44%)
Query: 89 SLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQS 148
S L L+ NL+ I +AF NL+ L L L + L+S ++ +LG L L L L ++
Sbjct: 75 STRALWLDGNNLSSIPSAAFQNLSSLDFLNLQGSWLRS-LEPQALLG-LQNLYYLHLERN 132
Query: 149 GISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDA 208
+ NL +F + L +L+L+ N L L+ L Q L HL L+L L L +
Sbjct: 133 RLRNLAVGLFTHTPSLASLSLSSNLLGRLEEG--LFQGLSHLWDLNLGWNSLV-VLPDTV 189
Query: 209 FVNATKLRTLYLSGNPLSAADLSVALK-PLTKLHRLSLRNCGLSRLPANTFHRFTCLQEL 267
F L L L+GN L+ L AL L +L L L L + AN F LQ+L
Sbjct: 190 FQGLGNLHELVLAGNKLTY--LQPALFCGLGELRELDLSRNALRSVKANVFVHLPRLQKL 247
Query: 268 DISHNPLIDAFT--ALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETL 325
+ N LI A A L +++L LD+ ++ + + TF + L L L+ N + +L
Sbjct: 248 YLDRN-LITAVAPGAFLG-MKALRWLDLSHNRVAGLMEDTFPGLLGLHVLRLAHNAIASL 305
Query: 326 ESGLFQNLTHLSVLELNNCGLTRLNETVFH-----ENYTYPD--LEELRLSG--NPLHVL 376
F++L L L+L + + +L E F E T D + E+R+ +V
Sbjct: 306 RPRTFKDLHFLEELQLGHNRIRQLGERTFEGLGQLEVLTLNDNQITEVRVGAFSGLFNVA 365
Query: 377 PDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHEN-YTYPDLEELR---LSGNPLHVL 432
+ +R++P ++++ D L L + + + H +T+ L LR L N + +
Sbjct: 366 VMNLSGNCLRSLPERVFQGLDKLHSLHLEHSCLGHVRLHTFAGLSGLRRLFLRDNSISSI 425
Query: 433 PTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNLSMTS 483
+ ++ +LP +F ++ L L+ N L+ S
Sbjct: 426 EEQSLAGLSELLELDLTTN--RLTHLPRQLFQGLGHLEYLLLSYNQLTTLS 474
Score = 212 (79.7 bits), Expect = 3.8e-14, Sum P(2) = 3.8e-14
Identities = 95/359 (26%), Positives = 158/359 (44%)
Query: 19 LITINLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLR 77
L ++L N ++ + G F SL L + L ++ F L+ L L+L N L
Sbjct: 124 LYYLHLERNRLRNLAVGLFTHTPSLASLSLSSNLLGRLEEGLFQGLSHLWDLNLGWNSLV 183
Query: 78 IIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNL 137
++ VF L +L L+L LTY+ P+ F L L+ L+LS+N L+S + + + +L
Sbjct: 184 VLPDTVFQGLGNLHELVLAGNKLTYLQPALFCGLGELRELDLSRNALRS-VKANVFV-HL 241
Query: 138 GKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSN 197
+L L L ++ I+ + F LR L+L+ N + L T G L+ L L L++
Sbjct: 242 PRLQKLYLDRNLITAVAPGAFLGMKALRWLDLSHNRVAGLMEDTFPG--LLGLHVLRLAH 299
Query: 198 CHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANT 257
+ L F + L L L N + + L +L L+L + ++ +
Sbjct: 300 NAIAS-LRPRTFKDLHFLEELQLGHNRIRQLG-ERTFEGLGQLEVLTLNDNQITEVRVGA 357
Query: 258 FHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLIL 317
F + +++S N L + L+ L L + +S L + TF ++ L+ L L
Sbjct: 358 FSGLFNVAVMNLSGNCLRSLPERVFQGLDKLHSLHLEHSCLGHVRLHTFAGLSGLRRLFL 417
Query: 318 SGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVL 376
N + ++E L+ L L+L LT L +F LE L LS N L L
Sbjct: 418 RDNSISSIEEQSLAGLSELLELDLTTNRLTHLPRQLFQG---LGHLEYLLLSYNQLTTL 473
Score = 146 (56.5 bits), Expect = 6.2e-07, Sum P(2) = 6.2e-07
Identities = 88/327 (26%), Positives = 130/327 (39%)
Query: 185 QNLVHL-DSLDLSN--CHLKG----PLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPL 237
+NL HL D + +S L G + AF N + L L L G+ L + + AL L
Sbjct: 63 KNLTHLPDDIPVSTRALWLDGNNLSSIPSAAFQNLSSLDFLNLQGSWLRSLEPQ-ALLGL 121
Query: 238 TKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSN 297
L+ L L L L F L L +S N L L L L L++G+++
Sbjct: 122 QNLYYLHLERNRLRNLAVGLFTHTPSLASLSLSSNLLGRLEEGLFQGLSHLWDLNLGWNS 181
Query: 298 LQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHEN 357
L + + F + +L L+L+GNKL L+ LF L L L+L+ L + VF
Sbjct: 182 LVVLPDTVFQGLGNLHELVLAGNKLTYLQPALFCGLGELRELDLSRNALRSVKANVFVH- 240
Query: 358 YTYPDLEELRLSGNPLH-VLPDS---TK-----QYSMRTIPTQIWKNFDFLVILFIL--- 405
P L++L L N + V P + K S + + F L+ L +L
Sbjct: 241 --LPRLQKLYLDRNLITAVAPGAFLGMKALRWLDLSHNRVAGLMEDTFPGLLGLHVLRLA 298
Query: 406 -NETVFHENYTYPDL---EELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPN 461
N T+ DL EEL+L N + L G +I +
Sbjct: 299 HNAIASLRPRTFKDLHFLEELQLGHNRIRQL--GERTFEGLGQLEVLTLNDNQITEVRVG 356
Query: 462 VFNNTRNITSLNLANNNLSMTSELSFQ 488
F+ N+ +NL+ N L E FQ
Sbjct: 357 AFSGLFNVAVMNLSGNCLRSLPERVFQ 383
Score = 50 (22.7 bits), Expect = 4.2e-22, Sum P(2) = 4.2e-22
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 525 LVGNPWKCDCNIADMWEWATREKG 548
L NPW C C + + ++A + G
Sbjct: 532 LDANPWDCSCPLKALRDFALQNPG 555
>MGI|MGI:1927197 [details] [associations]
symbol:Shoc2 "soc-2 (suppressor of clear) homolog (C.
elegans)" species:10090 "Mus musculus" [GO:0000164 "protein
phosphatase type 1 complex" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0019903
"protein phosphatase binding" evidence=ISO] [GO:0046579 "positive
regulation of Ras protein signal transduction" evidence=ISO]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR027036 PROSITE:PS51450
EMBL:AF068921 MGI:MGI:1927197 GO:GO:0005634 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875 Pfam:PF12799
GO:GO:0046579 GO:GO:0019903 GO:GO:0000164 HOGENOM:HOG000116557
GeneTree:ENSGT00600000084236 CTD:8036 HOVERGEN:HBG055661
OMA:LPHGIGN OrthoDB:EOG408N7W PANTHER:PTHR23155:SF38 EMBL:DQ479926
EMBL:AK077798 EMBL:AK146447 EMBL:BC013722 EMBL:BC049775
EMBL:BC083060 IPI:IPI00131754 RefSeq:NP_001161977.1
RefSeq:NP_062632.2 UniGene:Mm.228669 ProteinModelPortal:O88520
SMR:O88520 IntAct:O88520 STRING:O88520 PhosphoSite:O88520
PaxDb:O88520 PRIDE:O88520 Ensembl:ENSMUST00000025932
Ensembl:ENSMUST00000169861 GeneID:56392 KEGG:mmu:56392
UCSC:uc008hxg.2 InParanoid:Q91VH8 NextBio:312492 Bgee:O88520
CleanEx:MM_SHOC2 Genevestigator:O88520
GermOnline:ENSMUSG00000024976 Uniprot:O88520
Length = 582
Score = 286 (105.7 bits), Expect = 5.8e-22, P = 5.8e-22
Identities = 139/461 (30%), Positives = 204/461 (44%)
Query: 19 LITINLNANPIQ--PVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPL 76
L + L +N +Q P E LV +L+ L + E +L+ + P NL L LDL N L
Sbjct: 125 LTELYLYSNKLQSLPAEVGCLV--NLMTLALSENSLTSL-PDSLDNLKKLRMLDLRHNKL 181
Query: 77 RIIEPGVF--DPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVL 134
R I V+ D LT+L YL NR +T + NL L L + +NK+K +
Sbjct: 182 REIPSVVYRLDSLTTL-YLRFNR--ITTVEKD-IKNLPKLSMLSIRENKIKQ---LPAEI 234
Query: 135 GNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLD 194
G L L TLD+ + + +LP + N T + NL+L N+L+DL T+G NL L+ L
Sbjct: 235 GELCNLITLDVAHNQLEHLPKEI-GNCTQITNLDLQHNDLLDLP--DTIG-NLSSLNRLG 290
Query: 195 LSNCHLKG-PLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSL-RNCGLSR 252
L L P S + L L L N +S S+ L L KL+ L+L RNC
Sbjct: 291 LRYNRLSAIPRS---LAKCSALEELNLENNNISTLPESL-LSSLVKLNSLTLARNC-FQL 345
Query: 253 LPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSL 312
P +F+ + L++ HN + + S + L L+M + L + F TS+
Sbjct: 346 YPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLD-FGTWTSM 404
Query: 313 KTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFH-ENYTYPDLEELRLSGN 371
L L+ N+L + + L L VL L+N L +L + + DLEE +L
Sbjct: 405 VELNLATNQLTKIPEDV-SGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESL 463
Query: 372 PLHV--LPDSTK----QYSMRTIPTQIWKNFDFLVILFILNETVFH---ENYTYPDLEEL 422
P + L D K + T+P I + L L + + H E T +LEEL
Sbjct: 464 PNEIAYLKDLQKLVLTNNQLSTLPRGIG-HLTNLTHLGLGENLLTHLPEEIGTLENLEEL 522
Query: 423 RLSGNP-LHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNV 462
L+ NP LH LP C + +LPP +
Sbjct: 523 YLNDNPNLHSLP---FELALCSKLSIMSIENCPLSHLPPQI 560
Score = 227 (85.0 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 110/394 (27%), Positives = 181/394 (45%)
Query: 55 INPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHL 114
I P LT L +L L N L+ + P L +L L L+ +LT + P + DNL L
Sbjct: 114 ILPPSVKELTQLTELYLYSNKLQSL-PAEVGCLVNLMTLALSENSLTSL-PDSLDNLKKL 171
Query: 115 KTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENEL 174
+ L+L NKL+ + V+ L L TL LR + I+ + ++ N L L++ EN++
Sbjct: 172 RMLDLRHNKLR---EIPSVVYRLDSLTTLYLRFNRITTVEKDI-KNLPKLSMLSIRENKI 227
Query: 175 IDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVAL 234
L +G+ L +L +LD+++ L+ E N T++ L L N L DL +
Sbjct: 228 KQLPAE--IGE-LCNLITLDVAHNQLEHLPKEIG--NCTQITNLDLQHNDL--LDLPDTI 280
Query: 235 KPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMG 294
L+ L+RL LR LS +P + + + L+EL++ +N + +LLS L L L +
Sbjct: 281 GNLSSLNRLGLRYNRLSAIP-RSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLA 339
Query: 295 YSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVF 354
+ Q + +++ +L + N++ + G+F LS L + + LT L F
Sbjct: 340 RNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSL-PLDF 398
Query: 355 HENYTYPDLEELRLSGNPLHVLPDSTK---QYSMRTIPTQIWKNFDF-LVILFILNETVF 410
T+ + EL L+ N L +P+ + + + K L L L E
Sbjct: 399 G---TWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDL 455
Query: 411 HENY--TYP-------DLEELRLSGNPLHVLPTG 435
EN + P DL++L L+ N L LP G
Sbjct: 456 EENKLESLPNEIAYLKDLQKLVLTNNQLSTLPRG 489
Score = 192 (72.6 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 115/436 (26%), Positives = 188/436 (43%)
Query: 68 KLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSH 127
+LDLS + I+ P V + LT L L L L + P+ L +L TL LS+N L S
Sbjct: 104 RLDLSKRSIHILPPSVKE-LTQLTELYLYSNKLQSL-PAEVGCLVNLMTLALSENSLTSL 161
Query: 128 IDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNT----WLR--NLNLAENELIDLDVAT 181
D L NL KL LDLR + + +P V+ ++ +LR + E ++ +L +
Sbjct: 162 PD---SLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLPKLS 218
Query: 182 TLG--QN-----------LVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAA 228
L +N L +L +LD+++ L+ E N T++ L L N L
Sbjct: 219 MLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIG--NCTQITNLDLQHNDL--L 274
Query: 229 DLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESL 288
DL + L+ L+RL LR LS +P + + + L+EL++ +N + +LLS L L
Sbjct: 275 DLPDTIGNLSSLNRLGLRYNRLSAIP-RSLAKCSALEELNLENNNISTLPESLLSSLVKL 333
Query: 289 EHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTR 348
L + + Q + +++ +L + N++ + G+F LS L + + LT
Sbjct: 334 NSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTS 393
Query: 349 LNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNET 408
L F T+ + EL L+ N L +P+ + + L++ L +
Sbjct: 394 L-PLDFG---TWTSMVELNLATNQLTKIPEDVSGLV----------SLEVLILSNNLLKK 439
Query: 409 VFHENYTYPDLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRN 468
+ H L EL L N L LP N ++ LP + + T N
Sbjct: 440 LPHGLGNLRKLRELDLEENKLESLP--NEIAYLKDLQKLVLTNN-QLSTLPRGIGHLT-N 495
Query: 469 ITSLNLANNNLSMTSE 484
+T L L N L+ E
Sbjct: 496 LTHLGLGENLLTHLPE 511
Score = 122 (48.0 bits), Expect = 0.00054, P = 0.00054
Identities = 76/298 (25%), Positives = 127/298 (42%)
Query: 8 YNDRRNL-DNPG-LITIN---LNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTN 62
+ND +L D G L ++N L N + + + +L L ++ +S + ++
Sbjct: 270 HNDLLDLPDTIGNLSSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSS 329
Query: 63 LTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQN 122
L LN L L+ N ++ G +++ L + + I F L L + N
Sbjct: 330 LVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDN 389
Query: 123 KLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATT 182
+L S L G + L+L + ++ +P++V + L L L+ N L L
Sbjct: 390 QLTS---LPLDFGTWTSMVELNLATNQLTKIPEDV-SGLVSLEVLILSNNLLKKLPHG-- 443
Query: 183 LGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHR 242
LG NL L LDL L+ +E A++ L+ L L+ N LS L + LT L
Sbjct: 444 LG-NLRKLRELDLEENKLESLPNEIAYLK--DLQKLVLTNNQLST--LPRGIGHLTNLTH 498
Query: 243 LSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFT---ALLSPLE--SLEHLDMGY 295
L L L+ LP L+EL ++ NP + + AL S L S+E+ + +
Sbjct: 499 LGLGENLLTHLPEE-IGTLENLEELYLNDNPNLHSLPFELALCSKLSIMSIENCPLSH 555
>FB|FBgn0259677 [details] [associations]
symbol:CG42346 species:7227 "Drosophila melanogaster"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR003961 PROSITE:PS51450 SMART:SM00060 Gene3D:2.60.40.10
InterPro:IPR013783 EMBL:AE014298 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082
RefSeq:NP_001036306.2 UniGene:Dm.23593 ProteinModelPortal:Q0KHN6
SMR:Q0KHN6 GeneID:3355160 KEGG:dme:Dmel_CG42346 FlyBase:FBgn0259677
InParanoid:Q0KHN6 OMA:RHFSIPN OrthoDB:EOG40ZPCD PhylomeDB:Q0KHN6
GenomeRNAi:3355160 NextBio:850922 Bgee:Q0KHN6 Uniprot:Q0KHN6
Length = 1639
Score = 291 (107.5 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 126/428 (29%), Positives = 198/428 (46%)
Query: 10 DRRNLDNPGLITINLNANPIQPVEGAFLVA------RSLLYLYMQECTLSKINPQFFTNL 63
D + LD P L + L+ N ++A RSL L M C+L +I F
Sbjct: 729 DIQTLDIPNLRRLLLSHNNFSYAGSVGIMAGMLDRLRSLQQLSMSNCSLGQIPDLLFAKN 788
Query: 64 TTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNK 123
T L +LDL N L I +F L + L L R L+ A NL+ L++L+L++N+
Sbjct: 789 TNLVRLDLCDNRLTQINRNIFSGLNVFKELRLCRNELSDFPHIALYNLSTLESLDLARNQ 848
Query: 124 LKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTL 183
L S ID+ + G L L L LR + I+ L N T L +++L+ N L+ L A L
Sbjct: 849 LAS-IDFFKLSGTLN-LRQLILRDNKITALSGFNAVNLTQLDSVDLSGNLLLSLP-ANFL 905
Query: 184 GQNLVHLDSLDLSNCH-LKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHR 242
++ ++L + LSN L+ P S + V+ +L L L+GNP++ +V + L
Sbjct: 906 -RHSINLQKVHLSNNRFLQIPSSALSDVSIPRLSWLNLTGNPINRI-YTVKEERYPYLKE 963
Query: 243 LSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRIS 302
L + LS L + F F LQ L + +N + L +L LD+ + L+ +
Sbjct: 964 LYICQTNLSILTSKDFEAFQALQHLHLVNNRITRISPGAFKSLTNLLTLDLSVNELEMLP 1023
Query: 303 RSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPD 362
+ + L+ L +S N L+ LE +L + L+L+ L R+++ F +
Sbjct: 1024 KERLQGLRLLRFLNISHNTLKDLEE-FSVDLLEMQTLDLSFNQLDRISKKTFRNLH---G 1079
Query: 363 LEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTYPDLEEL 422
L EL L GN + VL + ++ + + KN+ LV L L E +L L
Sbjct: 1080 LLELFLMGNRMTVLSNDAFRFLRKLHVLDLRKNYFELVPLEPLRPL---ET----NLRTL 1132
Query: 423 RLSGNPLH 430
RL NPLH
Sbjct: 1133 RLEENPLH 1140
Score = 289 (106.8 bits), Expect = 1.8e-21, P = 1.8e-21
Identities = 96/360 (26%), Positives = 171/360 (47%)
Query: 17 PGLITINLNANPIQPVEG-AFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNP 75
P L + L+ N I + AF + ++ +Y++ ++ I+P F+ L L+ L L N
Sbjct: 377 PQLREVFLSENNILELPADAFTNSTNVDVIYLESNAIAHIDPNVFSTLVNLDHLYLRSNF 436
Query: 76 LRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLG 135
+ ++ +FD T L L L+ + + F L HL+ + L N+++ V
Sbjct: 437 IPLLPVTLFDKSTKLTSLSLDNNEIQDLEIGMFRKLEHLREVRLHNNRIRRVRRG--VFE 494
Query: 136 NLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDL-DVATTLGQNLVHLDSLD 194
L L L ++++ I ++ F ++++NL +N+L L D+ +L+ + L+
Sbjct: 495 PLPSLQELHIQKNSIEDIEPQAFHTLENMQHINLQDNQLTVLEDIFPDENSSLLSVQ-LE 553
Query: 195 LSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLP 254
+ H P + F K++ ++L N L+ + S +L RL L + + +
Sbjct: 554 ANYLHKVHPRT---FSRQQKVQIMWLKDNQLTRVERSF-FADTPQLGRLYLSDNKIRDIE 609
Query: 255 ANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKT 314
+TF LQ LD+S N L +PL+ LE L + ++++ I F K+ +LK+
Sbjct: 610 KDTFVNLLLLQFLDLSGNQLRQLRRDYFAPLQDLEELSLARNHIEAIEGYAFAKLKNLKS 669
Query: 315 LILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLH 374
L LS N L L +F N L+ L L NC L +L + F ++ T +L EL L N L+
Sbjct: 670 LDLSHNPLVQLTRDIFSNEFPLNSLNLGNCSLRKLEQHAF-KSLT--NLNELNLERNQLN 726
Score = 210 (79.0 bits), Expect = 6.3e-13, P = 6.3e-13
Identities = 92/379 (24%), Positives = 167/379 (44%)
Query: 9 NDRRNLDNPGLITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNK 68
N R +L++ ++ L P + + + L L + +++ F L ++K
Sbjct: 144 NVRSSLESLSIVNGKLTQMPSRALSSM----QKLTALDFDYNEIVRVDDYSFYGLR-ISK 198
Query: 69 LDLSGNPLRIIEPGVFDPLTS-LEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSH 127
L++ GN L+ + F L ++ + ++ L A L+HL+ L LS N++ +
Sbjct: 199 LNMKGNRLQGMPEHAFAGLEECMQEIDVSENGLRTFPLMALRKLDHLRILRLSNNRIPTF 258
Query: 128 I-DWTLVLGN------------LGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENEL 174
D L N L L LDL + + + + F L+ L+ N+
Sbjct: 259 YGDIQLATNNASAAAAAVGAFQLPSLIFLDLSSNQFAEIGPDCFRAFPQLKTLSFYANQ- 317
Query: 175 IDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVAL 234
I+L V ++L L SLD+S+ + G L F +L+T+ LS N + +
Sbjct: 318 IEL-VQPEAFKSLRELMSLDMSHNRIIG-LDPKVFEKNKRLQTVDLSHNHIHT--IGGVF 373
Query: 235 KPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMG 294
L +L + L + LPA+ F T + + + N + + S L +L+HL +
Sbjct: 374 SNLPQLREVFLSENNILELPADAFTNSTNVDVIYLESNAIAHIDPNVFSTLVNLDHLYLR 433
Query: 295 YSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVF 354
+ + + + F K T L +L L N+++ LE G+F+ L HL + L+N + R+ VF
Sbjct: 434 SNFIPLLPVTLFDKSTKLTSLSLDNNEIQDLEIGMFRKLEHLREVRLHNNRIRRVRRGVF 493
Query: 355 HENYTYPDLEELRLSGNPL 373
P L+EL + N +
Sbjct: 494 EP---LPSLQELHIQKNSI 509
Score = 199 (75.1 bits), Expect = 9.7e-12, P = 9.7e-12
Identities = 131/566 (23%), Positives = 222/566 (39%)
Query: 22 INLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIE 80
++L+ N ++ + F + L L + + I F L L LDLS NPL +
Sbjct: 622 LDLSGNQLRQLRRDYFAPLQDLEELSLARNHIEAIEGYAFAKLKNLKSLDLSHNPLVQLT 681
Query: 81 PGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKL 140
+F L L L C+L + AF +L +L L L +N+L TL + NL +L
Sbjct: 682 RDIFSNEFPLNSLNLGNCSLRKLEQHAFKSLTNLNELNLERNQLNPADIQTLDIPNLRRL 741
Query: 141 --DTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDL-DVATTLGQNLVHLDSLDLSN 197
+ +G + + L+ L+++ L + D+ NLV LD D
Sbjct: 742 LLSHNNFSYAGSVGIMAGMLDRLRSLQQLSMSNCSLGQIPDLLFAKNTNLVRLDLCD--- 798
Query: 198 CHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANT 257
+ ++ + F + L L N LS +AL L+ L L L L+ +
Sbjct: 799 -NRLTQINRNIFSGLNVFKELRLCRNELSDFP-HIALYNLSTLESLDLARNQLASIDFFK 856
Query: 258 FHRFTCLQELDISHNPL--IDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMT-SLKT 314
L++L + N + + F A+ L L+ +D+ NL + FL+ + +L+
Sbjct: 857 LSGTLNLRQLILRDNKITALSGFNAV--NLTQLDSVDLS-GNLLLSLPANFLRHSINLQK 913
Query: 315 LILSGNKLETLESGLFQNLT--HLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNP 372
+ LS N+ + S +++ LS L L + R+ TV E Y Y L+EL +
Sbjct: 914 VHLSNNRFLQIPSSALSDVSIPRLSWLNLTGNPINRIY-TVKEERYPY--LKELYICQTN 970
Query: 373 LHVLPDSTKQ-----YSMRTIPTQIWK----NFDFLVILFILNETVFHENYTYPD--LEE 421
L +L + + + +I + F L L L+ +V +E P L+
Sbjct: 971 LSILTSKDFEAFQALQHLHLVNNRITRISPGAFKSLTNLLTLDLSV-NELEMLPKERLQG 1029
Query: 422 LRLSG--NPLH-VLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNN 478
LRL N H L ++D + F N + L L N
Sbjct: 1030 LRLLRFLNISHNTLKDLEEFSVDLLEMQTLDLSFNQLDRISKKTFRNLHGLLELFLMGNR 1089
Query: 479 LSMTSELSFQFXXXXXXXXXXXXXXXXXTHISPT-VLRHNRAITSIKLVGNPWKCDCNIA 537
+++ S +F+F + P L N + +++L NP C C+
Sbjct: 1090 MTVLSNDAFRFLRKLHVLDLRKNYFELVP-LEPLRPLETN--LRTLRLEENPLHCSCDAQ 1146
Query: 538 DMWEWATREKGDIGVLVGSTTPTEIG 563
+WEW R+ + +GS IG
Sbjct: 1147 KLWEWL-RDHRKWSLSMGSGAGRGIG 1171
Score = 170 (64.9 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 90/409 (22%), Positives = 177/409 (43%)
Query: 86 PLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNL-GKLDTLD 144
P+ SL +R ++T +S F H++ L+ S + L++ D +L N+ L++L
Sbjct: 97 PIHSLSIYDFDR-SVTSLSQDVFQPGVHIRHLQFSHSHLEALKDNSL--RNVRSSLESLS 153
Query: 145 LRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPL 204
+ ++ +P ++ L L+ NE++ +D + G + + L++ L+G +
Sbjct: 154 IVNGKLTQMPSRALSSMQKLTALDFDYNEIVRVDDYSFYG---LRISKLNMKGNRLQG-M 209
Query: 205 SEDAFVNATK-LRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTC 263
E AF + ++ + +S N L L +AL+ L L L L N +R+P TF+
Sbjct: 210 PEHAFAGLEECMQEIDVSENGLRTFPL-MALRKLDHLRILRLSN---NRIP--TFYG--- 260
Query: 264 LQELDISHNPLIDAFTALLS-PLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKL 322
++ ++ N A A+ + L SL LD+ + I F LKTL N++
Sbjct: 261 --DIQLATNNASAAAAAVGAFQLPSLIFLDLSSNQFAEIGPDCFRAFPQLKTLSFYANQI 318
Query: 323 ETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYP--DLEE--LRLSGNPLHVLPD 378
E ++ F++L L L++++ + L+ VF +N DL + G LP
Sbjct: 319 ELVQPEAFKSLRELMSLDMSHNRIIGLDPKVFEKNKRLQTVDLSHNHIHTIGGVFSNLPQ 378
Query: 379 STKQY----SMRTIPTQIWKNFDFLVILFILNETVFH--ENY--TYPDLEELRLSGNPLH 430
+ + ++ +P + N + ++++ + + H N T +L+ L L N +
Sbjct: 379 LREVFLSENNILELPADAFTNSTNVDVIYLESNAIAHIDPNVFSTLVNLDHLYLRSNFIP 438
Query: 431 VLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNL 479
+LP +I L +F ++ + L NN +
Sbjct: 439 LLPV--TLFDKSTKLTSLSLDNNEIQDLEIGMFRKLEHLREVRLHNNRI 485
>UNIPROTKB|E1BU15 [details] [associations]
symbol:SHOC2 "Leucine-rich repeat protein SHOC-2"
species:9031 "Gallus gallus" [GO:0000164 "protein phosphatase type
1 complex" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0019903 "protein phosphatase binding" evidence=IEA] [GO:0046579
"positive regulation of Ras protein signal transduction"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR027036
PROSITE:PS51450 GO:GO:0005634 InterPro:IPR003591 SMART:SM00369
InterPro:IPR025875 Pfam:PF12799 GO:GO:0046579 GO:GO:0000164
GeneTree:ENSGT00600000084236 OMA:LPHGIGN PANTHER:PTHR23155:SF38
EMBL:AADN02030891 IPI:IPI00571083 Ensembl:ENSGALT00000014267
Uniprot:E1BU15
Length = 582
Score = 283 (104.7 bits), Expect = 1.2e-21, P = 1.2e-21
Identities = 138/459 (30%), Positives = 202/459 (44%)
Query: 19 LITINLNANPIQ--PVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPL 76
L + L +N +Q P E LV +L+ L + E +L+ + P NL L LDL N L
Sbjct: 125 LTELYLYSNKLQSLPAEVGCLV--NLVTLALSENSLTSL-PDSLDNLKKLRMLDLRHNKL 181
Query: 77 RIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGN 136
R I P V LTSL L L +T + NL+ L L + +NK+K +G
Sbjct: 182 REI-PSVVYRLTSLATLYLRFNRITTVEKD-IKNLSKLTMLSIRENKIKQ---LPAEIGE 236
Query: 137 LGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLS 196
L L TLD+ + + +LP+ + + T + NL+L NEL+DL T+G NL L L L
Sbjct: 237 LCNLITLDVAHNQLEHLPEEI-GSCTQITNLDLQHNELLDLP--ETIG-NLSSLSRLGLR 292
Query: 197 NCHLKG-PLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSL-RNCGLSRLP 254
L P S ++L L L N +S + L L KL L+L RNC S P
Sbjct: 293 YNRLSAIPKS---LAKCSELDELNLENNNISTLPEGL-LSSLVKLTSLTLARNCFQS-YP 347
Query: 255 ANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKT 314
+F+ + L++ HN + + S + L L+M + L + F TS+
Sbjct: 348 VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLD-FGTWTSMVE 406
Query: 315 LILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFH-ENYTYPDLEELRLSGNPL 373
L L+ N+L + + L L VL L+N L +L + + DLEE +L P
Sbjct: 407 LNLATNQLTKIPEDV-SGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPN 465
Query: 374 HV--LPDSTK----QYSMRTIPTQIWKNFDFLVILFILNETVFH---ENYTYPDLEELRL 424
+ L D K + T+P I + L L + + H E T +LEEL L
Sbjct: 466 EIAYLKDLQKLVLTNNQLTTLPRGIG-HLTNLTHLGLGENLLTHLPEEIGTLENLEELYL 524
Query: 425 SGNP-LHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNV 462
+ NP LH LP C + +LPP +
Sbjct: 525 NDNPNLHSLP---FELALCSKLSIMSIENCPLSHLPPQI 560
Score = 215 (80.7 bits), Expect = 3.9e-14, P = 3.9e-14
Identities = 108/392 (27%), Positives = 180/392 (45%)
Query: 57 PQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKT 116
P LT L +L L N L+ + P L +L L L+ +LT + P + DNL L+
Sbjct: 116 PSAVKELTQLTELYLYSNKLQSL-PAEVGCLVNLVTLALSENSLTSL-PDSLDNLKKLRM 173
Query: 117 LELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELID 176
L+L NKL+ + V+ L L TL LR + I+ + ++ N + L L++ EN++
Sbjct: 174 LDLRHNKLR---EIPSVVYRLTSLATLYLRFNRITTVEKDI-KNLSKLTMLSIRENKIKQ 229
Query: 177 LDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKP 236
L +G+ L +L +LD+++ L+ L E+ + T++ L L N L DL +
Sbjct: 230 LPAE--IGE-LCNLITLDVAHNQLEH-LPEE-IGSCTQITNLDLQHNEL--LDLPETIGN 282
Query: 237 LTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYS 296
L+ L RL LR LS +P + + + L EL++ +N + LLS L L L + +
Sbjct: 283 LSSLSRLGLRYNRLSAIP-KSLAKCSELDELNLENNNISTLPEGLLSSLVKLTSLTLARN 341
Query: 297 NLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHE 356
Q + +++ +L + N++ + G+F LS L + + LT L F
Sbjct: 342 CFQSYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSL-PLDFG- 399
Query: 357 NYTYPDLEELRLSGNPLHVLPDSTK---QYSMRTIPTQIWKNFDFLV-ILFILNETVFHE 412
T+ + EL L+ N L +P+ + + + K + L L E E
Sbjct: 400 --TWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEE 457
Query: 413 NY--TYP-------DLEELRLSGNPLHVLPTG 435
N + P DL++L L+ N L LP G
Sbjct: 458 NKLESLPNEIAYLKDLQKLVLTNNQLTTLPRG 489
Score = 186 (70.5 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 103/391 (26%), Positives = 166/391 (42%)
Query: 102 YISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANN 161
++ PSA L L L L NKL+S +G L L TL L ++ +++LPD++ N
Sbjct: 113 HMLPSAVKELTQLTELYLYSNKLQS---LPAEVGCLVNLVTLALSENSLTSLPDSL-DNL 168
Query: 162 TWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLS 221
LR L+L N+L ++ ++ L L +L L + + +D N +KL L +
Sbjct: 169 KKLRMLDLRHNKLREIP---SVVYRLTSLATLYLRFNRIT-TVEKD-IKNLSKLTMLSIR 223
Query: 222 GNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTAL 281
N + L + L L L + + L LP T + LD+ HN L+D
Sbjct: 224 ENKIK--QLPAEIGELCNLITLDVAHNQLEHLPEE-IGSCTQITNLDLQHNELLD-LPET 279
Query: 282 LSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLEL 341
+ L SL L + Y+ L I +S K + L L L N + TL GL +L L+ L L
Sbjct: 280 IGNLSSLSRLGLRYNRLSAIPKS-LAKCSELDELNLENNNISTLPEGLLSSLVKLTSLTL 338
Query: 342 -NNC-------GLTRLNETVFHENYTYPDLEELRLS-GNPLHVLPD-STKQYSMRTIPTQ 391
NC G ++ + T++ N + + ++ + VL + K + ++P
Sbjct: 339 ARNCFQSYPVGGPSQFS-TIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLD 397
Query: 392 IWKNFDFLVILFILNE-TVFHENYT-YPDLEELRLSGNPLHVLPTGNXXXXXXXXXXXXX 449
+ + N+ T E+ + LE L LS N L LP G
Sbjct: 398 FGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEE 457
Query: 450 XXXCKIDYLPPNVFNNTRNITSLNLANNNLS 480
K++ LP N +++ L L NN L+
Sbjct: 458 N---KLESLP-NEIAYLKDLQKLVLTNNQLT 484
>ZFIN|ZDB-GENE-031113-8 [details] [associations]
symbol:lrrc15 "leucine rich repeat containing 15"
species:7955 "Danio rerio" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001611 PROSITE:PS51450 ZFIN:ZDB-GENE-031113-8
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR000372 SMART:SM00013 GeneTree:ENSGT00700000104286
OMA:NHLEYIP EMBL:BX950188 EMBL:BX957243 IPI:IPI00628487
UniGene:Dr.18765 Ensembl:ENSDART00000104248 HOVERGEN:HBG095770
Uniprot:B0S8K3
Length = 564
Score = 282 (104.3 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 96/325 (29%), Positives = 154/325 (47%)
Query: 19 LITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRI 78
L+ N + ++P + A +L + ++++ P F LN L SG L
Sbjct: 53 LVISNTSIQSLKPSDFQTF-AETLTLFVAKNSNITEVEPHTFDQAFNLNVLGFSGTMLTS 111
Query: 79 IEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLG 138
+ +F LT+L L L+ L + S L ++ L+LS+N L S + G L
Sbjct: 112 LPDNLFQNLTALTTLTLSGNKLEVLPSSLLTPLVNVNKLDLSKNLLSS-LSEDAFRG-LD 169
Query: 139 KLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNC 198
+L+ L L+++ I L + F + LR+L L +NEL D+ L +LV+L+ L L +
Sbjct: 170 QLEMLMLQRNSIKQLHSSTFQGLSHLRSLFLQQNELTDIPAG--LFDDLVNLEVLHLQDN 227
Query: 199 HLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTF 258
++ L + F KL+ LYLS N LS + L L L SL + LSRL TF
Sbjct: 228 KIE-QLPANLFAKVQKLKKLYLSSNRLSLLPSGIFLN-LPNLTHFSLYDNRLSRLMPETF 285
Query: 259 HRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILS 318
LQEL + N L + S L ++ L + + +Q IS F + LK + L
Sbjct: 286 GPMA-LQELWLYDNLLTHLEENVFSNLTNIRLLVISRNRIQYISPGAFNGLIELKEVSLH 344
Query: 319 GNKLETLESGLFQNLTHLSVLELNN 343
N+L +E G+F+ L +L+ + + N
Sbjct: 345 TNRLTNIEPGIFRGLPNLANISIEN 369
Score = 236 (88.1 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 93/350 (26%), Positives = 155/350 (44%)
Query: 23 NLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPG 82
N N ++P F A +L L L+ + F NLT L L LSGN L ++
Sbjct: 82 NSNITEVEP--HTFDQAFNLNVLGFSGTMLTSLPDNLFQNLTALTTLTLSGNKLEVLPSS 139
Query: 83 VFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDT 142
+ PL ++ L L++ L+ +S AF L+ L+ L L +N +K T L L +
Sbjct: 140 LLTPLVNVNKLDLSKNLLSSLSEDAFRGLDQLEMLMLQRNSIKQLHSSTFQ--GLSHLRS 197
Query: 143 LDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKG 202
L L+Q+ ++++P +F + L L+L +N++ L L + L L LS+ L
Sbjct: 198 LFLQQNELTDIPAGLFDDLVNLEVLHLQDNKIEQLPA--NLFAKVQKLKKLYLSSNRLS- 254
Query: 203 PLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFT 262
L F+N L L N LS + P+ L L L + L+ L N F T
Sbjct: 255 LLPSGIFLNLPNLTHFSLYDNRLSRL-MPETFGPMA-LQELWLYDNLLTHLEENVFSNLT 312
Query: 263 CLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKL 322
++ L IS N + + L L+ + + + L I F + +L + + N++
Sbjct: 313 NIRLLVISRNRIQYISPGAFNGLIELKEVSLHTNRLTNIEPGIFRGLPNLANISIENNQI 372
Query: 323 ETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNP 372
+ + L ++ LS+LE+ N L L + + T +E + L NP
Sbjct: 373 KQIPIQLLDGVSRLSLLEMQNNSLQNLPKDFLN---TLSIVENVILHENP 419
Score = 208 (78.3 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 81/369 (21%), Positives = 162/369 (43%)
Query: 209 FVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELD 268
F A L L SG L++ ++ + LT L L+L L LP++ + +LD
Sbjct: 93 FDQAFNLNVLGFSGTMLTSLPDNL-FQNLTALTTLTLSGNKLEVLPSSLLTPLVNVNKLD 151
Query: 269 ISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESG 328
+S N L L+ LE L + ++++++ STF ++ L++L L N+L + +G
Sbjct: 152 LSKNLLSSLSEDAFRGLDQLEMLMLQRNSIKQLHSSTFQGLSHLRSLFLQQNELTDIPAG 211
Query: 329 LFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPD-------STK 381
LF +L +L VL L + + +L +F + L++L LS N L +LP +
Sbjct: 212 LFDDLVNLEVLHLQDNKIEQLPANLFAK---VQKLKKLYLSSNRLSLLPSGIFLNLPNLT 268
Query: 382 QYSM--RTIPTQIWKNFDFLVI--LFILNETVFH-ENYTYPDLEELRL---SGNPLHVLP 433
+S+ + + + F + + L++ + + H E + +L +RL S N + +
Sbjct: 269 HFSLYDNRLSRLMPETFGPMALQELWLYDNLLTHLEENVFSNLTNIRLLVISRNRIQYIS 328
Query: 434 TGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSFQFXXXX 493
G ++ + P +F N+ ++++ NN + ++ Q
Sbjct: 329 PGAFNGLIELKEVSLHTN--RLTNIEPGIFRGLPNLANISIENNQIK---QIPIQLLDGV 383
Query: 494 XXXXXXXXXXXXXTHISPTVLRHNRAITSIKLVGNPWKCDCNIADMWEWATR--EK-GDI 550
++ L + ++ L NPW+CD +I W+W ++ EK ++
Sbjct: 384 SRLSLLEMQNNSLQNLPKDFLNTLSIVENVILHENPWRCDQDIIPFWDWLSQHSEKVKNL 443
Query: 551 GVLVGSTTP 559
+++ S+ P
Sbjct: 444 SLVMCSSPP 452
Score = 203 (76.5 bits), Expect = 7.6e-13, P = 7.6e-13
Identities = 78/288 (27%), Positives = 133/288 (46%)
Query: 89 SLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQS 148
++ L+++ ++ + PS F TL +++N + ++ L+ L +
Sbjct: 49 TINALVISNTSIQSLKPSDFQTFAETLTLFVAKNSNITEVE-PHTFDQAFNLNVLGFSGT 107
Query: 149 GISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDA 208
+++LPDN+F N T L L L+ N+L L ++L LV+++ LDLS +L LSEDA
Sbjct: 108 MLTSLPDNLFQNLTALTTLTLSGNKLEVLP--SSLLTPLVNVNKLDLSK-NLLSSLSEDA 164
Query: 209 FVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELD 268
F +L L L N + S + L+ L L L+ L+ +PA F L+ L
Sbjct: 165 FRGLDQLEMLMLQRNSIKQLHSST-FQGLSHLRSLFLQQNELTDIPAGLFDDLVNLEVLH 223
Query: 269 ISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESG 328
+ N + L + ++ L+ L + + L + FL + +L L N+L L
Sbjct: 224 LQDNKIEQLPANLFAKVQKLKKLYLSSNRLSLLPSGIFLNLPNLTHFSLYDNRLSRLMPE 283
Query: 329 LFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVL 376
F + L L L + LT L E VF N T ++ L +S N + +
Sbjct: 284 TFGPMA-LQELWLYDNLLTHLEENVF-SNLT--NIRLLVISRNRIQYI 327
Score = 179 (68.1 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 72/242 (29%), Positives = 111/242 (45%)
Query: 141 DTLDL---RQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSN 197
+TL L + S I+ + + F L L + L L L QNL L +L LS
Sbjct: 73 ETLTLFVAKNSNITEVEPHTFDQAFNLNVLGFSGTMLTSLP--DNLFQNLTALTTLTLSG 130
Query: 198 CHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANT 257
L+ L + L LS N LS+ A + L +L L L+ + +L ++T
Sbjct: 131 NKLE-VLPSSLLTPLVNVNKLDLSKNLLSSLSED-AFRGLDQLEMLMLQRNSIKQLHSST 188
Query: 258 FHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLIL 317
F + L+ L + N L D L L +LE L + + ++++ + F K+ LK L L
Sbjct: 189 FQGLSHLRSLFLQQNELTDIPAGLFDDLVNLEVLHLQDNKIEQLPANLFAKVQKLKKLYL 248
Query: 318 SGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLP 377
S N+L L SG+F NL +L+ L + L+RL E + L+EL L N L L
Sbjct: 249 SSNRLSLLPSGIFLNLPNLTHFSLYDNRLSRL----MPETFGPMALQELWLYDNLLTHLE 304
Query: 378 DS 379
++
Sbjct: 305 EN 306
Score = 162 (62.1 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 52/196 (26%), Positives = 93/196 (47%)
Query: 14 LDNPGLITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSG 73
L+ P L +L N + + +L L++ + L+ + F+NLT + L +S
Sbjct: 262 LNLPNLTHFSLYDNRLSRLMPETFGPMALQELWLYDNLLTHLEENVFSNLTNIRLLVISR 321
Query: 74 NPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLV 133
N ++ I PG F+ L L+ + L+ LT I P F L +L + + N++K I L+
Sbjct: 322 NRIQYISPGAFNGLIELKEVSLHTNRLTNIEPGIFRGLPNLANISIENNQIKQ-IPIQLL 380
Query: 134 LGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENEL-IDLDVATT---LGQNLVH 189
G + +L L+++ + + NLP + + + N+ L EN D D+ L Q+
Sbjct: 381 DG-VSRLSLLEMQNNSLQNLPKDFLNTLSIVENVILHENPWRCDQDIIPFWDWLSQHSEK 439
Query: 190 LDSLDLSNCHLKGPLS 205
+ +L L C PL+
Sbjct: 440 VKNLSLVMCSSPPPLN 455
>UNIPROTKB|F1LRE2 [details] [associations]
symbol:Igfals "Insulin-like growth factor-binding protein
complex acid labile subunit" species:10116 "Rattus norvegicus"
[GO:0005634 "nucleus" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
RGD:68429 GO:GO:0005634 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GeneTree:ENSGT00690000101816 IPI:IPI00202416
OMA:FCGLGEL Ensembl:ENSRNOT00000020233 ArrayExpress:F1LRE2
Uniprot:F1LRE2
Length = 602
Score = 278 (102.9 bits), Expect = 1.6e-21, Sum P(2) = 1.6e-21
Identities = 97/311 (31%), Positives = 151/311 (48%)
Query: 45 LYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYIS 104
L++ LS I F NL++L+ L+L G+ LR +EP L +L +L L R L ++
Sbjct: 78 LWLDGNNLSSIPSAAFQNLSSLDFLNLQGSWLRSLEPQALLGLQNLYHLHLERNRLRNLA 137
Query: 105 PSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWL 164
F + L +L LS N L ++ L G L L L+L + + LPD VF L
Sbjct: 138 VGLFTHTPSLASLSLSSNLL-GRLEEGLFQG-LSHLWDLNLGWNSLVVLPDTVFQGLGNL 195
Query: 165 RNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNP 224
L LA N+L L A G L L LDLS L+ + + FV+ +L+ LYL N
Sbjct: 196 HELVLAGNKLTYLQPALFCG--LGELRELDLSRNALRS-VKANVFVHLPRLQKLYLDRNL 252
Query: 225 LSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSP 284
++A A + L L L + ++ L +TF L L ++HN +
Sbjct: 253 ITAV-APRAFLGMKALRWLDLSHNRVAGLMEDTFPGLLGLHVLRLAHNAIASLRPRTFKD 311
Query: 285 LESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELN-N 343
L LE L +G++ ++++ TF + L+ L L+ N++ + G F L +++V+ L+ N
Sbjct: 312 LHFLEELQLGHNRIRQLGERTFEGLGQLEVLTLNDNQITEVRVGAFSGLFNVAVMNLSGN 371
Query: 344 CGLTRLNETVF 354
C L L E VF
Sbjct: 372 C-LRSLPERVF 381
Score = 260 (96.6 bits), Expect = 1.7e-19, Sum P(2) = 1.7e-19
Identities = 91/303 (30%), Positives = 145/303 (47%)
Query: 52 LSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNL 111
L+ + P F L L +LDLS N LR ++ VF L L+ L L+R +T ++P AF +
Sbjct: 205 LTYLQPALFCGLGELRELDLSRNALRSVKANVFVHLPRLQKLYLDRNLITAVAPRAFLGM 264
Query: 112 NHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAE 171
L+ L+LS N++ ++ T G LG L L L + I++L F + +L L L
Sbjct: 265 KALRWLDLSHNRVAGLMEDTFP-GLLG-LHVLRLAHNAIASLRPRTFKDLHFLEELQLGH 322
Query: 172 NELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLS 231
N + L T G L L+ L L++ + + AF + + LSGN L +
Sbjct: 323 NRIRQLGERTFEG--LGQLEVLTLNDNQIT-EVRVGAFSGLFNVAVMNLSGNCLRSLPER 379
Query: 232 VALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHL 291
V + L KLH L L + L + +TF + L+ L + N + L+ L L L
Sbjct: 380 V-FQGLDKLHSLHLEHSCLGHVRLHTFAGLSGLRRLFLRDNSISSIEEQSLAGLSELLEL 438
Query: 292 DMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNE 351
D+ + L + R F + L+ L+LS N+L TL + + L L++++ L L E
Sbjct: 439 DLTTNRLTHLPRQLFQGLGHLEYLLLSYNQLTTLSAEVLGPLQRAFWLDISHNHLETLAE 498
Query: 352 TVF 354
+F
Sbjct: 499 GLF 501
Score = 237 (88.5 bits), Expect = 6.3e-17, Sum P(2) = 6.3e-17
Identities = 109/393 (27%), Positives = 169/393 (43%)
Query: 24 LNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPG 82
L+ N + + AF SL +L +Q L + PQ L L L L N LR + G
Sbjct: 80 LDGNNLSSIPSAAFQNLSSLDFLNLQGSWLRSLEPQALLGLQNLYHLHLERNRLRNLAVG 139
Query: 83 VFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDT 142
+F SL L L+ L + F L+HL L L N L D T+ G LG L
Sbjct: 140 LFTHTPSLASLSLSSNLLGRLEEGLFQGLSHLWDLNLGWNSLVVLPD-TVFQG-LGNLHE 197
Query: 143 LDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKG 202
L L + ++ L +F LR L+L+ N L V + +L L L L +L
Sbjct: 198 LVLAGNKLTYLQPALFCGLGELRELDLSRNAL--RSVKANVFVHLPRLQKLYLDR-NLIT 254
Query: 203 PLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFT 262
++ AF+ LR L LS N ++ + L LH L L + ++ L TF
Sbjct: 255 AVAPRAFLGMKALRWLDLSHNRVAGL-MEDTFPGLLGLHVLRLAHNAIASLRPRTFKDLH 313
Query: 263 CLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKL 322
L+EL + HN + L LE L + + + + F + ++ + LSGN L
Sbjct: 314 FLEELQLGHNRIRQLGERTFEGLGQLEVLTLNDNQITEVRVGAFSGLFNVAVMNLSGNCL 373
Query: 323 ETLESGLFQNLTHLSVLEL-NNC-GLTRLN--------ETVFHENYTYPDLEELRLSG-N 371
+L +FQ L L L L ++C G RL+ +F + + +EE L+G +
Sbjct: 374 RSLPERVFQGLDKLHSLHLEHSCLGHVRLHTFAGLSGLRRLFLRDNSISSIEEQSLAGLS 433
Query: 372 PLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFI 404
L L +T + + +P Q+++ L L +
Sbjct: 434 ELLELDLTTNR--LTHLPRQLFQGLGHLEYLLL 464
Score = 230 (86.0 bits), Expect = 3.8e-16, Sum P(2) = 3.8e-16
Identities = 98/345 (28%), Positives = 145/345 (42%)
Query: 29 IQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLT 88
+QP F L L + L + F +L L KL L N + + P F +
Sbjct: 208 LQPA--LFCGLGELRELDLSRNALRSVKANVFVHLPRLQKLYLDRNLITAVAPRAFLGMK 265
Query: 89 SLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQS 148
+L +L L+ + + F L L L L+ N + S T +L L+ L L +
Sbjct: 266 ALRWLDLSHNRVAGLMEDTFPGLLGLHVLRLAHNAIASLRPRTFK--DLHFLEELQLGHN 323
Query: 149 GISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLS-NCHLKGPLSED 207
I L + F L L L +N++ ++ V G L ++ ++LS NC L+ L E
Sbjct: 324 RIRQLGERTFEGLGQLEVLTLNDNQITEVRVGAFSG--LFNVAVMNLSGNC-LRS-LPER 379
Query: 208 AFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQEL 267
F KL +L+L + L L L+ L RL LR+ +S + + + L EL
Sbjct: 380 VFQGLDKLHSLHLEHSCLGHVRLHT-FAGLSGLRRLFLRDNSISSIEEQSLAGLSELLEL 438
Query: 268 DISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLES 327
D++ N L L L LE+L + Y+ L +S + L +S N LETL
Sbjct: 439 DLTTNRLTHLPRQLFQGLGHLEYLLLSYNQLTTLSAEVLGPLQRAFWLDISHNHLETLAE 498
Query: 328 GLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNP 372
GLF +L L L L N L + P LE L L NP
Sbjct: 499 GLFSSLGRLRYLSLRNNSLQTFSPQ--------PGLERLWLDANP 535
Score = 228 (85.3 bits), Expect = 6.4e-16, Sum P(2) = 6.4e-16
Identities = 95/357 (26%), Positives = 164/357 (45%)
Query: 22 INLNANPIQPVEG-AFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIE 80
+NL + ++ +E A L ++L +L+++ L + FT+ +L L LS N L +E
Sbjct: 102 LNLQGSWLRSLEPQALLGLQNLYHLHLERNRLRNLAVGLFTHTPSLASLSLSSNLLGRLE 161
Query: 81 PGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKL 140
G+F L+ L L L +L + + F L +L L L+ NKL +++ L G LG+L
Sbjct: 162 EGLFQGLSHLWDLNLGWNSLVVLPDTVFQGLGNLHELVLAGNKL-TYLQPALFCG-LGEL 219
Query: 141 DTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHL 200
LDL ++ + ++ NVF + L+ L L N + + LG + LDLS+ +
Sbjct: 220 RELDLSRNALRSVKANVFVHLPRLQKLYLDRNLITAVAPRAFLGMKALRW--LDLSHNRV 277
Query: 201 KGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHR 260
G L ED F L L L+ N +++ K L L L L + + +L TF
Sbjct: 278 AG-LMEDTFPGLLGLHVLRLAHNAIASLRPRT-FKDLHFLEELQLGHNRIRQLGERTFEG 335
Query: 261 FTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGN 320
L+ L ++ N + + S L ++ +++ + L+ + F + L +L L +
Sbjct: 336 LGQLEVLTLNDNQITEVRVGAFSGLFNVAVMNLSGNCLRSLPERVFQGLDKLHSLHLEHS 395
Query: 321 KLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLP 377
L + F L+ L L L + ++ + E +L EL L+ N L LP
Sbjct: 396 CLGHVRLHTFAGLSGLRRLFLRDNSISSIEEQSLAG---LSELLELDLTTNRLTHLP 449
Score = 215 (80.7 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 110/411 (26%), Positives = 182/411 (44%)
Query: 89 SLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQS 148
S L L+ NL+ I +AF NL+ L L L + L+S ++ +LG L L L L ++
Sbjct: 74 STRALWLDGNNLSSIPSAAFQNLSSLDFLNLQGSWLRS-LEPQALLG-LQNLYHLHLERN 131
Query: 149 GISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDA 208
+ NL +F + L +L+L+ N L L+ L Q L HL L+L L L +
Sbjct: 132 RLRNLAVGLFTHTPSLASLSLSSNLLGRLEEG--LFQGLSHLWDLNLGWNSLV-VLPDTV 188
Query: 209 FVNATKLRTLYLSGNPLSAADLSVALK-PLTKLHRLSLRNCGLSRLPANTFHRFTCLQEL 267
F L L L+GN L+ L AL L +L L L L + AN F LQ+L
Sbjct: 189 FQGLGNLHELVLAGNKLTY--LQPALFCGLGELRELDLSRNALRSVKANVFVHLPRLQKL 246
Query: 268 DISHNPLIDAFT--ALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETL 325
+ N LI A A L +++L LD+ ++ + + TF + L L L+ N + +L
Sbjct: 247 YLDRN-LITAVAPRAFLG-MKALRWLDLSHNRVAGLMEDTFPGLLGLHVLRLAHNAIASL 304
Query: 326 ESGLFQNLTHLSVLELNNCGLTRLNETVFH-----ENYTYPD--LEELRLSG--NPLHVL 376
F++L L L+L + + +L E F E T D + E+R+ +V
Sbjct: 305 RPRTFKDLHFLEELQLGHNRIRQLGERTFEGLGQLEVLTLNDNQITEVRVGAFSGLFNVA 364
Query: 377 PDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHEN-YTYPDLEELR---LSGNPLHVL 432
+ +R++P ++++ D L L + + + H +T+ L LR L N + +
Sbjct: 365 VMNLSGNCLRSLPERVFQGLDKLHSLHLEHSCLGHVRLHTFAGLSGLRRLFLRDNSISSI 424
Query: 433 PTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNLSMTS 483
+ ++ +LP +F ++ L L+ N L+ S
Sbjct: 425 EEQSLAGLSELLELDLTTN--RLTHLPRQLFQGLGHLEYLLLSYNQLTTLS 473
Score = 147 (56.8 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 88/327 (26%), Positives = 130/327 (39%)
Query: 185 QNLVHL-DSLDLSN--CHLKG----PLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPL 237
+NL HL D + +S L G + AF N + L L L G+ L + + AL L
Sbjct: 62 KNLTHLPDDIPVSTRALWLDGNNLSSIPSAAFQNLSSLDFLNLQGSWLRSLEPQ-ALLGL 120
Query: 238 TKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSN 297
L+ L L L L F L L +S N L L L L L++G+++
Sbjct: 121 QNLYHLHLERNRLRNLAVGLFTHTPSLASLSLSSNLLGRLEEGLFQGLSHLWDLNLGWNS 180
Query: 298 LQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHEN 357
L + + F + +L L+L+GNKL L+ LF L L L+L+ L + VF
Sbjct: 181 LVVLPDTVFQGLGNLHELVLAGNKLTYLQPALFCGLGELRELDLSRNALRSVKANVFVH- 239
Query: 358 YTYPDLEELRLSGNPLH-VLPDS---TK-----QYSMRTIPTQIWKNFDFLVILFIL--- 405
P L++L L N + V P + K S + + F L+ L +L
Sbjct: 240 --LPRLQKLYLDRNLITAVAPRAFLGMKALRWLDLSHNRVAGLMEDTFPGLLGLHVLRLA 297
Query: 406 -NETVFHENYTYPDL---EELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPN 461
N T+ DL EEL+L N + L G +I +
Sbjct: 298 HNAIASLRPRTFKDLHFLEELQLGHNRIRQL--GERTFEGLGQLEVLTLNDNQITEVRVG 355
Query: 462 VFNNTRNITSLNLANNNLSMTSELSFQ 488
F+ N+ +NL+ N L E FQ
Sbjct: 356 AFSGLFNVAVMNLSGNCLRSLPERVFQ 382
Score = 50 (22.7 bits), Expect = 1.6e-21, Sum P(2) = 1.6e-21
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 525 LVGNPWKCDCNIADMWEWATREKG 548
L NPW C C + + ++A + G
Sbjct: 531 LDANPWDCSCPLKALRDFALQNPG 554
>FB|FBgn0029114 [details] [associations]
symbol:Tollo "Tollo" species:7227 "Drosophila melanogaster"
[GO:0005886 "plasma membrane" evidence=ISS] [GO:0004888
"transmembrane signaling receptor activity" evidence=IEA;ISS]
[GO:0007165 "signal transduction" evidence=ISS] [GO:0006952
"defense response" evidence=NAS] [GO:0016021 "integral to membrane"
evidence=ISS] [GO:0007352 "zygotic specification of dorsal/ventral
axis" evidence=IEA] [GO:0006963 "positive regulation of
antibacterial peptide biosynthetic process" evidence=IEA]
[GO:0050830 "defense response to Gram-positive bacterium"
evidence=IEA] [GO:0008063 "Toll signaling pathway" evidence=IEA]
[GO:0009620 "response to fungus" evidence=IEA] [GO:0060049
"regulation of protein glycosylation" evidence=IMP] [GO:0048935
"peripheral nervous system neuron development" evidence=IMP]
[GO:0002227 "innate immune response in mucosa" evidence=IMP]
InterPro:IPR000157 InterPro:IPR001611 InterPro:IPR027202
Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450 SMART:SM00255
GO:GO:0016021 EMBL:AE014296 InterPro:IPR003591 SMART:SM00369
GO:GO:0005622 InterPro:IPR000372 SMART:SM00013 GO:GO:0004888
GO:GO:0002227 GO:GO:0048935 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00700000104286 GO:GO:0060049 SUPFAM:SSF52200
PANTHER:PTHR24371:SF0 HSSP:O60603 FlyBase:FBgn0029114 EMBL:AF204158
EMBL:AF247764 EMBL:AY118551 RefSeq:NP_524757.1 UniGene:Dm.3403
SMR:Q9V477 IntAct:Q9V477 MINT:MINT-316842 STRING:Q9V477
EnsemblMetazoa:FBtr0075607 GeneID:44497 KEGG:dme:Dmel_CG6890
UCSC:CG6890-RA CTD:44497 InParanoid:Q9V477 OMA:TIRTHNG
GenomeRNAi:44497 NextBio:837325 Uniprot:Q9V477
Length = 1346
Score = 280 (103.6 bits), Expect = 3.9e-21, Sum P(2) = 3.9e-21
Identities = 105/357 (29%), Positives = 173/357 (48%)
Query: 19 LITINLNANPIQPVEGAFLVARS-LLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLR 77
L +++L+AN + + A L A L +L M + ++S + + F L +L +DLS N L
Sbjct: 212 LQSLDLSANKMVSLPTAMLSALGRLTHLNMAKNSMSFLADRAFEGLLSLRVVDLSANRLT 271
Query: 78 IIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSH-IDWTLVLGN 136
+ P +F L+ + L ++ ++P F L L L+L+ N+L S I+ +G
Sbjct: 272 SLPPELFAETKQLQEIYLRNNSINVLAPGIFGELAELLVLDLASNELNSQWINAATFVG- 330
Query: 137 LGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLS 196
L +L LDL + IS L ++F L+ L L +N ID + + +L +L +L LS
Sbjct: 331 LKRLMMLDLSANKISRLEAHIFRPLASLQILKLEDN-YID-QLPGGIFADLTNLHTLILS 388
Query: 197 NCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPAN 256
+ + + L L L N +S D +L ++L L L + L +P
Sbjct: 389 RNRIS-VIEQRTLQGLKNLLVLSLDFNRISRMDQR-SLVNCSQLQDLHLNDNKLQAVPEA 446
Query: 257 TFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLI 316
H L+ LD+ N + ++ LESL L M ++L I R F +M+SL+ L
Sbjct: 447 LAH-VQLLKTLDVGENMISQIENTSITQLESLYGLRMTENSLTHIRRGVFDRMSSLQILN 505
Query: 317 LSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPL 373
LS NKL+++E+G Q + L + L+ L + +F E P+L L +SGN L
Sbjct: 506 LSQNKLKSIEAGSLQRNSQLQAIRLDGNQLKSI-AGLFTE---LPNLVWLNISGNRL 558
Score = 208 (78.3 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 124/518 (23%), Positives = 213/518 (41%)
Query: 64 TTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNK 123
+TL LDLS N + + + L L +L + + ++++++ AF+ L L+ ++LS N+
Sbjct: 210 STLQSLDLSANKMVSLPTAMLSALGRLTHLNMAKNSMSFLADRAFEGLLSLRVVDLSANR 269
Query: 124 LKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELID--LDVAT 181
L S + L +L + LR + I+ L +F L L+LA NEL ++ AT
Sbjct: 270 LTS-LPPEL-FAETKQLQEIYLRNNSINVLAPGIFGELAELLVLDLASNELNSQWINAAT 327
Query: 182 TLGQNLVHLDSLDLS-------NCHLKGPLSEDAFVNATKLRTLYLSGNP---------- 224
+G L L LDLS H+ PL A + KL Y+ P
Sbjct: 328 FVG--LKRLMMLDLSANKISRLEAHIFRPL---ASLQILKLEDNYIDQLPGGIFADLTNL 382
Query: 225 ----LSAADLSV----ALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLID 276
LS +SV L+ L L LSL +SR+ + + LQ+L ++ N L
Sbjct: 383 HTLILSRNRISVIEQRTLQGLKNLLVLSLDFNRISRMDQRSLVNCSQLQDLHLNDNKL-Q 441
Query: 277 AFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHL 336
A L+ ++ L+ LD+G + + +I ++ ++ SL L ++ N L + G+F ++ L
Sbjct: 442 AVPEALAHVQLLKTLDVGENMISQIENTSITQLESLYGLRMTENSLTHIRRGVFDRMSSL 501
Query: 337 SVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNF 396
+L L+ L + N L+ +RL GN L + + +P +W N
Sbjct: 502 QILNLSQNKLKSIEAGSLQRN---SQLQAIRLDGNQLKSIAGLFTE-----LPNLVWLN- 552
Query: 397 DFLVILFILNETVFHENYTY-P-DLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCK 454
I + +Y++ P L+ L + N + L GN
Sbjct: 553 -------ISGNRLEKFDYSHIPIGLQWLDVRANRITQL--GNYFEIESELSLSTFDASYN 603
Query: 455 I-DYLPPNVFNNTRNITSLNLANNNLSMTSELSFQFXXXXXXXXXXXXXXXXXTHISPTV 513
+ + + N+ + LN +N +S +F T + P
Sbjct: 604 LLTEITASSIPNSVEVLYLN--DNQISKIQPYTF---FKKPNLTRVDLVRNRLTTLEPNA 658
Query: 514 LR-----HNRAITSIKLVGNPWKCDCNIADMWEWATRE 546
LR +R I + N ++CDCN+ D + RE
Sbjct: 659 LRLSPIAEDREIPEFYIGHNAYECDCNL-DWLQKVNRE 695
Score = 194 (73.4 bits), Expect = 8.5e-12, Sum P(2) = 8.5e-12
Identities = 83/307 (27%), Positives = 138/307 (44%)
Query: 60 FTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFD-NLNH----- 113
F L +LDLS N + +I G+ PL SL++L + + IS F +L+
Sbjct: 148 FVEFRQLERLDLSLNNIWLIPDGMVCPLKSLQHLNASYNKIQDISNFYFSASLSSRKARV 207
Query: 114 ----LKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNL 169
L++L+LS NK+ S T +L LG+L L++ ++ +S L D F LR ++L
Sbjct: 208 CGSTLQSLDLSANKMVSLP--TAMLSALGRLTHLNMAKNSMSFLADRAFEGLLSLRVVDL 265
Query: 170 AENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAAD 229
+ N L L L L + L N + L+ F +L L L+ N L++
Sbjct: 266 SANRLTSLP--PELFAETKQLQEIYLRNNSIN-VLAPGIFGELAELLVLDLASNELNSQW 322
Query: 230 LSVA-LKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESL 288
++ A L +L L L +SRL A+ F LQ L + N + + + L +L
Sbjct: 323 INAATFVGLKRLMMLDLSANKISRLEAHIFRPLASLQILKLEDNYIDQLPGGIFADLTNL 382
Query: 289 EHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTR 348
L + + + I + T + +L L L N++ ++ N + L L LN+ L
Sbjct: 383 HTLILSRNRISVIEQRTLQGLKNLLVLSLDFNRISRMDQRSLVNCSQLQDLHLNDNKLQA 442
Query: 349 LNETVFH 355
+ E + H
Sbjct: 443 VPEALAH 449
Score = 183 (69.5 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 99/377 (26%), Positives = 171/377 (45%)
Query: 79 IEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHI-DW-TLVL-- 134
+ P F L L L + C L ++ +F L L+ L + ++H DW T+ L
Sbjct: 89 LSPDSFRSLVELRDLTIEYCKLGNLTDGSFRGLQELRNLTI-----RTHNGDWSTMSLEM 143
Query: 135 -GN----LGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLD---VATTLGQN 186
N +L+ LDL + I +PD + L++LN + N++ D+ + +L
Sbjct: 144 ASNSFVEFRQLERLDLSLNNIWLIPDGMVCPLKSLQHLNASYNKIQDISNFYFSASLSSR 203
Query: 187 LVH-----LDSLDLS-NCHLKGPLSEDAFVNAT-KLRTLYLSGNPLS-AADLSVALKPLT 238
L SLDLS N + P A ++A +L L ++ N +S AD A + L
Sbjct: 204 KARVCGSTLQSLDLSANKMVSLPT---AMLSALGRLTHLNMAKNSMSFLADR--AFEGLL 258
Query: 239 KLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNL 298
L + L L+ LP F LQE+ + +N + + L L LD+ + L
Sbjct: 259 SLRVVDLSANRLTSLPPELFAETKQLQEIYLRNNSINVLAPGIFGELAELLVLDLASNEL 318
Query: 299 --QRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHE 356
Q I+ +TF+ + L L LS NK+ LE+ +F+ L L +L+L + + +L +F +
Sbjct: 319 NSQWINAATFVGLKRLMMLDLSANKISRLEAHIFRPLASLQILKLEDNYIDQLPGGIFAD 378
Query: 357 NYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTY 416
+L L LS N + V+ T Q ++ + + + DF I + ++ + +
Sbjct: 379 ---LTNLHTLILSRNRISVIEQRTLQ-GLKNL---LVLSLDFNRISRMDQRSLVNCS--- 428
Query: 417 PDLEELRLSGNPLHVLP 433
L++L L+ N L +P
Sbjct: 429 -QLQDLHLNDNKLQAVP 444
Score = 180 (68.4 bits), Expect = 2.3e-13, Sum P(3) = 2.3e-13
Identities = 92/332 (27%), Positives = 159/332 (47%)
Query: 19 LITINLNANPIQPVEG-AFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLR 77
L+ ++L+AN I +E F SL L +++ + ++ F +LT L+ L LS N +
Sbjct: 334 LMMLDLSANKISRLEAHIFRPLASLQILKLEDNYIDQLPGGIFADLTNLHTLILSRNRIS 393
Query: 78 IIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKS------HIDW- 130
+IE L +L L L+ ++ + + N + L+ L L+ NKL++ H+
Sbjct: 394 VIEQRTLQGLKNLLVLSLDFNRISRMDQRSLVNCSQLQDLHLNDNKLQAVPEALAHVQLL 453
Query: 131 -TLVLG----------NLGKLDTL-DLR--QSGISNLPDNVFANNTWLRNLNLAENELID 176
TL +G ++ +L++L LR ++ ++++ VF + L+ LNL++N+L
Sbjct: 454 KTLDVGENMISQIENTSITQLESLYGLRMTENSLTHIRRGVFDRMSSLQILNLSQNKLKS 513
Query: 177 LDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKP 236
++ A +L +N L ++ L LK F L L +SGN L D S P
Sbjct: 514 IE-AGSLQRNS-QLQAIRLDGNQLKSIAG--LFTELPNLVWLNISGNRLEKFDYSHI--P 567
Query: 237 LTKLHRLSLRNCGLSRLPANTFHRFT--CLQELDISHNPLIDAFTALLSPLESLEHLDMG 294
+ L L +R +++L N F + L D S+N L+ TA P S+E L +
Sbjct: 568 IG-LQWLDVRANRITQL-GNYFEIESELSLSTFDASYN-LLTEITASSIP-NSVEVLYLN 623
Query: 295 YSNLQRISRSTFLKMTSLKTLILSGNKLETLE 326
+ + +I TF K +L + L N+L TLE
Sbjct: 624 DNQISKIQPYTFFKKPNLTRVDLVRNRLTTLE 655
Score = 133 (51.9 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 66/239 (27%), Positives = 112/239 (46%)
Query: 164 LRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNC-HLKGPLSEDAFVNATKLRTLYLSG 222
LR +N +EL + + + QN V L L+ ++ + LS D+F + +LR L +
Sbjct: 52 LRTIN---SELENTNFSVIQPQNTVRL-RLECNDALFFQSSLSPDSFRSLVELRDLTIEY 107
Query: 223 NPL-SAADLSVALKPLTKLHRLSLR--NCGLS----RLPANTFHRFTCLQELDISHNPLI 275
L + D S + L +L L++R N S + +N+F F L+ LD+S N +
Sbjct: 108 CKLGNLTDGS--FRGLQELRNLTIRTHNGDWSTMSLEMASNSFVEFRQLERLDLSLNNIW 165
Query: 276 DAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTS----------LKTLILSGNKLETL 325
++ PL+SL+HL+ Y+ +Q IS F S L++L LS NK+ +L
Sbjct: 166 LIPDGMVCPLKSLQHLNASYNKIQDISNFYFSASLSSRKARVCGSTLQSLDLSANKMVSL 225
Query: 326 ESGLFQNLTHLSVLELNNCGLTRLNETVFHE--NYTYPDLEELRLSGNPLHVLPDSTKQ 382
+ + L L+ L + ++ L + F + DL RL+ P + + TKQ
Sbjct: 226 PTAMLSALGRLTHLNMAKNSMSFLADRAFEGLLSLRVVDLSANRLTSLPPELFAE-TKQ 283
Score = 101 (40.6 bits), Expect = 0.00024, Sum P(3) = 0.00024
Identities = 30/109 (27%), Positives = 55/109 (50%)
Query: 264 LQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLE 323
L+ L ++H+ + L LE L + + L+ ++ + F + +L+ L L N +
Sbjct: 817 LKVLHLNHSRIEVLHNRTFYGLLELEVLQLQSNQLKALNGNEFQGLDNLQELYLQHNAIA 876
Query: 324 TLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNP 372
T+++ F +L HL +L L++ +T F +Y L ELRL+ NP
Sbjct: 877 TIDTLTFTHLYHLKILRLDHNAITSFAVWNFLPSY----LNELRLASNP 921
Score = 76 (31.8 bits), Expect = 2.3e-13, Sum P(3) = 2.3e-13
Identities = 39/129 (30%), Positives = 57/129 (44%)
Query: 315 LILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLH 374
L L GN L+S F L VL LN+ + L+ F Y +LE L+L N L
Sbjct: 796 LYLDGNNFRELQSHAFIGRKRLKVLHLNHSRIEVLHNRTF---YGLLELEVLQLQSNQLK 852
Query: 375 VLP-------DSTKQ-Y----SMRTIPTQIWKNFDFLVILFILNETV--FHE-NYTYPDL 419
L D+ ++ Y ++ TI T + + L IL + + + F N+ L
Sbjct: 853 ALNGNEFQGLDNLQELYLQHNAIATIDTLTFTHLYHLKILRLDHNAITSFAVWNFLPSYL 912
Query: 420 EELRLSGNP 428
ELRL+ NP
Sbjct: 913 NELRLASNP 921
Score = 69 (29.3 bits), Expect = 0.00024, Sum P(3) = 0.00024
Identities = 19/63 (30%), Positives = 31/63 (49%)
Query: 19 LITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRI 78
L T + + N + + A + S+ LY+ + +SKI P F L ++DL N L
Sbjct: 595 LSTFDASYNLLTEIT-ASSIPNSVEVLYLNDNQISKIQPYTFFKKPNLTRVDLVRNRLTT 653
Query: 79 IEP 81
+EP
Sbjct: 654 LEP 656
Score = 56 (24.8 bits), Expect = 3.9e-21, Sum P(2) = 3.9e-21
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 520 ITSIKLVGNPWKCDCNIAD 538
+ ++L NPW C C D
Sbjct: 912 LNELRLASNPWTCSCEFID 930
>UNIPROTKB|Q1KS52 [details] [associations]
symbol:ALS "Acid-labile subunit" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005634 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 CTD:3483
HOVERGEN:HBG000327 OrthoDB:EOG4FFD1R InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GeneTree:ENSGT00690000101816
HOGENOM:HOG000116109 OMA:FCGLGEL EMBL:CU929968 EMBL:DQ459343
EMBL:DQ459344 RefSeq:NP_001041651.1 UniGene:Ssc.16015 STRING:Q1KS52
Ensembl:ENSSSCT00000008781 GeneID:397322 KEGG:ssc:397322
Uniprot:Q1KS52
Length = 606
Score = 278 (102.9 bits), Expect = 5.0e-21, P = 5.0e-21
Identities = 98/311 (31%), Positives = 149/311 (47%)
Query: 45 LYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYIS 104
L++ S + F NL++L L+L G+ L +EP L +L +L L R L ++
Sbjct: 79 LWLDSNNFSSVPAGAFRNLSSLGFLNLQGSGLASLEPQALLGLQNLYHLHLERNQLRSLA 138
Query: 105 PSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWL 164
F + L +L L N L S ++ L G L L L+L + ++ LPD F L
Sbjct: 139 AHTFLHTPGLASLGL-HNNLLSRVEEGLFQG-LTNLWDLNLGWNSLAVLPDTAFHGLANL 196
Query: 165 RNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNP 224
R L LA N+L L A G L L LDLS L+ + + FV KL+ LYL N
Sbjct: 197 RELVLAGNKLTYLQPALFCG--LGELRELDLSRNALRS-VKANVFVKLPKLQKLYLDHN- 252
Query: 225 LSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSP 284
L AA A + L L L + + L +TF L L ++HN L
Sbjct: 253 LLAAVAPGAFLGMKALRWLDLSHNRVGGLLEDTFPGLLGLHVLRLAHNALASLRPRTFKD 312
Query: 285 LESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELN-N 343
L LE L +G++ L+++ F + L+ L L+ N+++ +++G F L +++V+ L+ N
Sbjct: 313 LHFLEELQLGHNRLRQLPEKAFEGLGQLEVLALNDNQIQEIKAGAFLGLFNVAVMNLSGN 372
Query: 344 CGLTRLNETVF 354
C L L E VF
Sbjct: 373 C-LRNLPEQVF 382
Score = 247 (92.0 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 96/333 (28%), Positives = 152/333 (45%)
Query: 22 INLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIE 80
+NL N + + + AF +L L + L+ + P F L L +LDLS N LR ++
Sbjct: 175 LNLGWNSLAVLPDTAFHGLANLRELVLAGNKLTYLQPALFCGLGELRELDLSRNALRSVK 234
Query: 81 PGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKL 140
VF L L+ L L+ L ++P AF + L+ L+LS N++ ++ T G LG L
Sbjct: 235 ANVFVKLPKLQKLYLDHNLLAAVAPGAFLGMKALRWLDLSHNRVGGLLEDTFP-GLLG-L 292
Query: 141 DTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHL 200
L L + +++L F + +L L L N L L G L L+ L L++ +
Sbjct: 293 HVLRLAHNALASLRPRTFKDLHFLEELQLGHNRLRQLPEKAFEG--LGQLEVLALNDNQI 350
Query: 201 KGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHR 260
+ + AF+ + + LSGN L V + L KLH L L + L R+ +TF
Sbjct: 351 Q-EIKAGAFLGLFNVAVMNLSGNCLRNLPEQV-FRGLGKLHSLHLEHSCLGRVGLHTFAG 408
Query: 261 FTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGN 320
+ L+ L + N L L L L LD+ + L + F + L+ L+LS N
Sbjct: 409 LSGLRRLFLKDNGLEAIDEQSLWGLAELLELDLTANRLTHLPGRLFQGLGKLEYLLLSRN 468
Query: 321 KLETLESGLFQNLTHLSVLELNNCGLTRLNETV 353
+L L + L L++++ L L E V
Sbjct: 469 RLSALPADALGPLQRTFWLDVSHNRLQALPEAV 501
Score = 245 (91.3 bits), Expect = 2.2e-17, P = 2.2e-17
Identities = 103/367 (28%), Positives = 168/367 (45%)
Query: 12 RNLDNPGLITINLNANPIQPVEG-AFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLD 70
RNL + G + NL + + +E A L ++L +L+++ L + F + L L
Sbjct: 95 RNLSSLGFL--NLQGSGLASLEPQALLGLQNLYHLHLERNQLRSLAAHTFLHTPGLASLG 152
Query: 71 LSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDW 130
L N L +E G+F LT+L L L +L + +AF L +L+ L L+ NKL +++
Sbjct: 153 LHNNLLSRVEEGLFQGLTNLWDLNLGWNSLAVLPDTAFHGLANLRELVLAGNKL-TYLQP 211
Query: 131 TLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHL 190
L G LG+L LDL ++ + ++ NVF L+ L L N L + LG +
Sbjct: 212 ALFCG-LGELRELDLSRNALRSVKANVFVKLPKLQKLYLDHNLLAAVAPGAFLGMKALRW 270
Query: 191 DSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGL 250
LDLS+ + G L ED F L L L+ N L++ K L L L L + L
Sbjct: 271 --LDLSHNRVGG-LLEDTFPGLLGLHVLRLAHNALASLRPRT-FKDLHFLEELQLGHNRL 326
Query: 251 SRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMT 310
+LP F L+ L ++ N + + L ++ +++ + L+ + F +
Sbjct: 327 RQLPEKAFEGLGQLEVLALNDNQIQEIKAGAFLGLFNVAVMNLSGNCLRNLPEQVFRGLG 386
Query: 311 SLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSG 370
L +L L + L + F L+ L L L + GL ++E + +L EL L+
Sbjct: 387 KLHSLHLEHSCLGRVGLHTFAGLSGLRRLFLKDNGLEAIDEQSL---WGLAELLELDLTA 443
Query: 371 NPLHVLP 377
N L LP
Sbjct: 444 NRLTHLP 450
Score = 232 (86.7 bits), Expect = 5.8e-16, P = 5.8e-16
Identities = 104/358 (29%), Positives = 146/358 (40%)
Query: 24 LNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPG 82
L++N V GAF SL +L +Q L+ + PQ L L L L N LR +
Sbjct: 81 LDSNNFSSVPAGAFRNLSSLGFLNLQGSGLASLEPQALLGLQNLYHLHLERNQLRSLAAH 140
Query: 83 VFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDT 142
F L L L+ L+ + F L +L L L N L D T G L L
Sbjct: 141 TFLHTPGLASLGLHNNLLSRVEEGLFQGLTNLWDLNLGWNSLAVLPD-TAFHG-LANLRE 198
Query: 143 LDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKG 202
L L + ++ L +F LR L+L+ N L V + L L L L + +L
Sbjct: 199 LVLAGNKLTYLQPALFCGLGELRELDLSRNAL--RSVKANVFVKLPKLQKLYLDH-NLLA 255
Query: 203 PLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFT 262
++ AF+ LR L LS N + L L LH L L + L+ L TF
Sbjct: 256 AVAPGAFLGMKALRWLDLSHNRVGGL-LEDTFPGLLGLHVLRLAHNALASLRPRTFKDLH 314
Query: 263 CLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKL 322
L+EL + HN L L LE L + + +Q I FL + ++ + LSGN L
Sbjct: 315 FLEELQLGHNRLRQLPEKAFEGLGQLEVLALNDNQIQEIKAGAFLGLFNVAVMNLSGNCL 374
Query: 323 ETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDST 380
L +F+ L L L L + L R+ H L L L N L + + +
Sbjct: 375 RNLPEQVFRGLGKLHSLHLEHSCLGRVG---LHTFAGLSGLRRLFLKDNGLEAIDEQS 429
Score = 232 (86.7 bits), Expect = 5.8e-16, P = 5.8e-16
Identities = 102/360 (28%), Positives = 157/360 (43%)
Query: 19 LITINLNANPIQPVEG-AFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLR 77
L ++L N ++ + FL L L + LS++ F LT L L+L N L
Sbjct: 124 LYHLHLERNQLRSLAAHTFLHTPGLASLGLHNNLLSRVEEGLFQGLTNLWDLNLGWNSLA 183
Query: 78 IIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNL 137
++ F L +L L+L LTY+ P+ F L L+ L+LS+N L+S + + + L
Sbjct: 184 VLPDTAFHGLANLRELVLAGNKLTYLQPALFCGLGELRELDLSRNALRS-VKANVFV-KL 241
Query: 138 GKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSN 197
KL L L + ++ + F LR L+L+ N + L T G L+ L L L++
Sbjct: 242 PKLQKLYLDHNLLAAVAPGAFLGMKALRWLDLSHNRVGGLLEDTFPG--LLGLHVLRLAH 299
Query: 198 CHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANT 257
L L F + L L L N L A + L +L L+L + + + A
Sbjct: 300 NALAS-LRPRTFKDLHFLEELQLGHNRLRQLP-EKAFEGLGQLEVLALNDNQIQEIKAGA 357
Query: 258 FHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLIL 317
F + +++S N L + + L L L + +S L R+ TF ++ L+ L L
Sbjct: 358 FLGLFNVAVMNLSGNCLRNLPEQVFRGLGKLHSLHLEHSCLGRVGLHTFAGLSGLRRLFL 417
Query: 318 SGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLP 377
N LE ++ L L L+L LT L +F LE L LS N L LP
Sbjct: 418 KDNGLEAIDEQSLWGLAELLELDLTANRLTHLPGRLFQG---LGKLEYLLLSRNRLSALP 474
Score = 228 (85.3 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 85/304 (27%), Positives = 132/304 (43%)
Query: 22 INLNANPIQPVEG-AFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIE 80
++L+ N ++ V+ F+ L LY+ L+ + P F + L LDLS N + +
Sbjct: 223 LDLSRNALRSVKANVFVKLPKLQKLYLDHNLLAAVAPGAFLGMKALRWLDLSHNRVGGLL 282
Query: 81 PGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKL 140
F L L L L L + P F +L+ L+ L+L N+L+ + LG+L
Sbjct: 283 EDTFPGLLGLHVLRLAHNALASLRPRTFKDLHFLEELQLGHNRLRQLPE--KAFEGLGQL 340
Query: 141 DTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHL 200
+ L L + I + F + +NL+ N L +L G +H SL L + L
Sbjct: 341 EVLALNDNQIQEIKAGAFLGLFNVAVMNLSGNCLRNLPEQVFRGLGKLH--SLHLEHSCL 398
Query: 201 KGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHR 260
G + F + LR L+L N L A D +L L +L L L L+ LP F
Sbjct: 399 -GRVGLHTFAGLSGLRRLFLKDNGLEAID-EQSLWGLAELLELDLTANRLTHLPGRLFQG 456
Query: 261 FTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGN 320
L+ L +S N L L PL+ LD+ ++ LQ + + + L+ L L N
Sbjct: 457 LGKLEYLLLSRNRLSALPADALGPLQRTFWLDVSHNRLQALPEAVLAPLGQLRYLSLRNN 516
Query: 321 KLET 324
L T
Sbjct: 517 SLRT 520
Score = 221 (82.9 bits), Expect = 9.3e-15, P = 9.3e-15
Identities = 128/484 (26%), Positives = 193/484 (39%)
Query: 71 LSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDW 130
L N + G F L+SL +L L L + P A L +L L L +N+L+S
Sbjct: 81 LDSNNFSSVPAGAFRNLSSLGFLNLQGSGLASLEPQALLGLQNLYHLHLERNQLRSLAAH 140
Query: 131 TLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHL 190
T L G L +L L + +S + + +F T L +LNL N L L T L +L
Sbjct: 141 TF-LHTPG-LASLGLHNNLLSRVEEGLFQGLTNLWDLNLGWNSLAVLP--DTAFHGLANL 196
Query: 191 DSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGL 250
L L+ L L F +LR L LS N L + +V +K L KL +L L + L
Sbjct: 197 RELVLAGNKLTY-LQPALFCGLGELRELDLSRNALRSVKANVFVK-LPKLQKLYLDHNLL 254
Query: 251 SRLPANTFHRFTCLQELDISHNP----LIDAFTALLSPLESLEHLDMGYSNLQRISRSTF 306
+ + F L+ LD+SHN L D F LL L L + ++ L + TF
Sbjct: 255 AAVAPGAFLGMKALRWLDLSHNRVGGLLEDTFPGLLG----LHVLRLAHNALASLRPRTF 310
Query: 307 LKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEEL 366
+ L+ L L N+L L F+ L L VL LN+ + + F + ++ +
Sbjct: 311 KDLHFLEELQLGHNRLRQLPEKAFEGLGQLEVLALNDNQIQEIKAGAFLGLF---NVAVM 367
Query: 367 RLSGNPLHVLPDST-----KQYSMRT-------IPTQIWKNFDFLVILFILN---ETVFH 411
LSGN L LP+ K +S+ + + L LF+ + E +
Sbjct: 368 NLSGNCLRNLPEQVFRGLGKLHSLHLEHSCLGRVGLHTFAGLSGLRRLFLKDNGLEAIDE 427
Query: 412 EN-YTYPDLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNIT 470
++ + +L EL L+ N L LP G ++ LP + +
Sbjct: 428 QSLWGLAELLELDLTANRLTHLP-GRLFQGLGKLEYLLLSRN-RLSALPADALGPLQRTF 485
Query: 471 SLNLANNNLSMTSELSFQFXXXXXXXXXXXXXXXXXTHISPTVLRHNRAITSIKLVGNPW 530
L++++N L E T + P L R + L GNPW
Sbjct: 486 WLDVSHNRLQALPEAVL--APLGQLRYLSLRNNSLRTFV-PQPLGLER----LWLEGNPW 538
Query: 531 KCDC 534
C C
Sbjct: 539 DCGC 542
Score = 206 (77.6 bits), Expect = 4.1e-13, P = 4.1e-13
Identities = 95/345 (27%), Positives = 141/345 (40%)
Query: 29 IQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLT 88
+QP F L L + L + F L L KL L N L + PG F +
Sbjct: 209 LQPA--LFCGLGELRELDLSRNALRSVKANVFVKLPKLQKLYLDHNLLAAVAPGAFLGMK 266
Query: 89 SLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQS 148
+L +L L+ + + F L L L L+ N L S T +L L+ L L +
Sbjct: 267 ALRWLDLSHNRVGGLLEDTFPGLLGLHVLRLAHNALASLRPRTFK--DLHFLEELQLGHN 324
Query: 149 GISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLS-NCHLKGPLSED 207
+ LP+ F L L L +N++ ++ LG L ++ ++LS NC L+ L E
Sbjct: 325 RLRQLPEKAFEGLGQLEVLALNDNQIQEIKAGAFLG--LFNVAVMNLSGNC-LRN-LPEQ 380
Query: 208 AFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQEL 267
F KL +L+L + L L L+ L RL L++ GL + + L EL
Sbjct: 381 VFRGLGKLHSLHLEHSCLGRVGLHT-FAGLSGLRRLFLKDNGLEAIDEQSLWGLAELLEL 439
Query: 268 DISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLES 327
D++ N L L L LE+L + + L + + L +S N+L+ L
Sbjct: 440 DLTANRLTHLPGRLFQGLGKLEYLLLSRNRLSALPADALGPLQRTFWLDVSHNRLQALPE 499
Query: 328 GLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNP 372
+ L L L L N L T + LE L L GNP
Sbjct: 500 AVLAPLGQLRYLSLRNNSL----RTFVPQPL---GLERLWLEGNP 537
Score = 146 (56.5 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 46/134 (34%), Positives = 65/134 (48%)
Query: 243 LSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRIS 302
L L + S +PA F + L L++ + L L L++L HL + + L+ ++
Sbjct: 79 LWLDSNNFSSVPAGAFRNLSSLGFLNLQGSGLASLEPQALLGLQNLYHLHLERNQLRSLA 138
Query: 303 RSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPD 362
TFL L +L L N L +E GLFQ LT+L L L L L +T FH +
Sbjct: 139 AHTFLHTPGLASLGLHNNLLSRVEEGLFQGLTNLWDLNLGWNSLAVLPDTAFHG---LAN 195
Query: 363 LEELRLSGNPLHVL 376
L EL L+GN L L
Sbjct: 196 LRELVLAGNKLTYL 209
Score = 129 (50.5 bits), Expect = 9.9e-05, P = 9.9e-05
Identities = 68/227 (29%), Positives = 97/227 (42%)
Query: 19 LITINLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLR 77
L + LN N IQ ++ GAFL ++ + + L + Q F L L+ L L + L
Sbjct: 340 LEVLALNDNQIQEIKAGAFLGLFNVAVMNLSGNCLRNLPEQVFRGLGKLHSLHLEHSCLG 399
Query: 78 IIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNL 137
+ F L+ L L L L I + L L L+L+ N+L +H+ L G L
Sbjct: 400 RVGLHTFAGLSGLRRLFLKDNGLEAIDEQSLWGLAELLELDLTANRL-THLPGRLFQG-L 457
Query: 138 GKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLD--VATTLGQNLVHLDSLDL 195
GKL+ L L ++ +S LP + L+++ N L L V LGQ L L L
Sbjct: 458 GKLEYLLLSRNRLSALPADALGPLQRTFWLDVSHNRLQALPEAVLAPLGQ----LRYLSL 513
Query: 196 SNCHLKGPLSEDAFV-NATKLRTLYLSGNPLSAADLSVALKPLTKLH 241
N L+ FV L L+L GNP AL+ L H
Sbjct: 514 RNNSLR------TFVPQPLGLERLWLEGNPWDCGCPLRALRALALQH 554
>MGI|MGI:107973 [details] [associations]
symbol:Igfals "insulin-like growth factor binding protein,
acid labile subunit" species:10090 "Mus musculus" [GO:0005515
"protein binding" evidence=IPI] [GO:0005520 "insulin-like growth
factor binding" evidence=ISO] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=ISO] [GO:0042567
"insulin-like growth factor ternary complex" evidence=ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 MGI:MGI:107973
GO:GO:0005634 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007155 CTD:3483
HOVERGEN:HBG000327 OrthoDB:EOG4FFD1R InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 EMBL:U66900 EMBL:AK004926
IPI:IPI00556721 PIR:JC6128 RefSeq:NP_032366.2 UniGene:Mm.3135
ProteinModelPortal:P70389 SMR:P70389 IntAct:P70389 MINT:MINT-217480
STRING:P70389 PaxDb:P70389 PRIDE:P70389 Ensembl:ENSMUST00000050714
GeneID:16005 KEGG:mmu:16005 GeneTree:ENSGT00690000101816
InParanoid:P70389 NextBio:288802 Bgee:P70389 Genevestigator:P70389
GermOnline:ENSMUSG00000046070 GO:GO:0042567 Uniprot:P70389
Length = 603
Score = 269 (99.8 bits), Expect = 1.0e-20, Sum P(2) = 1.0e-20
Identities = 95/311 (30%), Positives = 151/311 (48%)
Query: 45 LYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYIS 104
L++ LS I F NL++L+ L+L G+ LR +EP L +L +L L R L ++
Sbjct: 79 LWLDGNNLSSIPSAAFQNLSSLDFLNLQGSWLRSLEPQALLGLQNLYHLHLERNLLRSLA 138
Query: 105 PSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWL 164
F + L +L L N L ++ L G L L L+L + + LPD VF L
Sbjct: 139 AGLFRHTPSLASLSLGNNLL-GRLEEGLFRG-LSHLWDLNLGWNSLVVLPDTVFQGLGNL 196
Query: 165 RNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNP 224
L LA N+L L A G L L LDLS L+ + + F++ +L+ LYL N
Sbjct: 197 HELVLAGNKLTYLQPALLCG--LGELRELDLSRNALRS-VKANVFIHLPRLQKLYLDRNL 253
Query: 225 LSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSP 284
++A A + L L L + ++ L +TF L L ++HN +
Sbjct: 254 ITAV-APRAFLGMKALRWLDLSHNRVAGLLEDTFPGLLGLHVLRLAHNAITSLRPRTFKD 312
Query: 285 LESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELN-N 343
L LE L +G++ ++++ TF + L+ L L+ N++ ++ G F L +++V+ L+ N
Sbjct: 313 LHFLEELQLGHNRIRQLGEKTFEGLGQLEVLTLNDNQIHEVKVGAFFGLFNVAVMNLSGN 372
Query: 344 CGLTRLNETVF 354
C L L E VF
Sbjct: 373 C-LRSLPEHVF 382
Score = 238 (88.8 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 119/428 (27%), Positives = 178/428 (41%)
Query: 24 LNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPG 82
L+ N + + AF SL +L +Q L + PQ L L L L N LR + G
Sbjct: 81 LDGNNLSSIPSAAFQNLSSLDFLNLQGSWLRSLEPQALLGLQNLYHLHLERNLLRSLAAG 140
Query: 83 VFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDT 142
+F SL L L L + F L+HL L L N L D T+ G LG L
Sbjct: 141 LFRHTPSLASLSLGNNLLGRLEEGLFRGLSHLWDLNLGWNSLVVLPD-TVFQG-LGNLHE 198
Query: 143 LDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKG 202
L L + ++ L + LR L+L+ N L V + +L L L L +L
Sbjct: 199 LVLAGNKLTYLQPALLCGLGELRELDLSRNAL--RSVKANVFIHLPRLQKLYLDR-NLIT 255
Query: 203 PLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFT 262
++ AF+ LR L LS N ++ L L LH L L + ++ L TF
Sbjct: 256 AVAPRAFLGMKALRWLDLSHNRVAGL-LEDTFPGLLGLHVLRLAHNAITSLRPRTFKDLH 314
Query: 263 CLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKL 322
L+EL + HN + L LE L + + + + F + ++ + LSGN L
Sbjct: 315 FLEELQLGHNRIRQLGEKTFEGLGQLEVLTLNDNQIHEVKVGAFFGLFNVAVMNLSGNCL 374
Query: 323 ETLESGLFQNLTHLSVLEL-NNC-GLTRLN--------ETVFHENYTYPDLEELRLSGNP 372
+L +FQ L L L L ++C G RL+ +F + + +EE L+G
Sbjct: 375 RSLPEHVFQGLGRLHSLHLEHSCLGRIRLHTFAGLSGLRRLFLRDNSISSIEEQSLAGLS 434
Query: 373 LHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNE--TVFHENYTYPDLEE---LRLSGN 427
+ D T + +P Q+++ L L + N T+ E+ P L+ L LS N
Sbjct: 435 ELLELDLTAN-QLTHLPRQLFQGLGQLEYLLLSNNQLTMLSEDVLGP-LQRAFWLDLSHN 492
Query: 428 PLHVLPTG 435
L G
Sbjct: 493 RLETPAEG 500
Score = 220 (82.5 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 98/351 (27%), Positives = 149/351 (42%)
Query: 24 LNANPIQPVEGAFLVARS-LLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPG 82
L N + ++ A L L L + L + F +L L KL L N + + P
Sbjct: 201 LAGNKLTYLQPALLCGLGELRELDLSRNALRSVKANVFIHLPRLQKLYLDRNLITAVAPR 260
Query: 83 VFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDT 142
F + +L +L L+ + + F L L L L+ N + S T +L L+
Sbjct: 261 AFLGMKALRWLDLSHNRVAGLLEDTFPGLLGLHVLRLAHNAITSLRPRTFK--DLHFLEE 318
Query: 143 LDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLS-NCHLK 201
L L + I L + F L L L +N++ ++ V G L ++ ++LS NC L+
Sbjct: 319 LQLGHNRIRQLGEKTFEGLGQLEVLTLNDNQIHEVKVGAFFG--LFNVAVMNLSGNC-LR 375
Query: 202 GPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRF 261
L E F +L +L+L + L L L+ L RL LR+ +S + +
Sbjct: 376 S-LPEHVFQGLGRLHSLHLEHSCLGRIRLHT-FAGLSGLRRLFLRDNSISSIEEQSLAGL 433
Query: 262 TCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNK 321
+ L ELD++ N L L L LE+L + + L +S + L LS N+
Sbjct: 434 SELLELDLTANQLTHLPRQLFQGLGQLEYLLLSNNQLTMLSEDVLGPLQRAFWLDLSHNR 493
Query: 322 LETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNP 372
LET GLF +L L L L N L +T + P LE L L NP
Sbjct: 494 LETPAEGLFSSLGRLRYLNLRNNSL----QTFVPQ----PGLERLWLDANP 536
Score = 207 (77.9 bits), Expect = 8.5e-14, Sum P(2) = 8.5e-14
Identities = 96/361 (26%), Positives = 158/361 (43%)
Query: 19 LITINLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLR 77
L ++L N ++ + G F SL L + L ++ F L+ L L+L N L
Sbjct: 124 LYHLHLERNLLRSLAAGLFRHTPSLASLSLGNNLLGRLEEGLFRGLSHLWDLNLGWNSLV 183
Query: 78 IIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNL 137
++ VF L +L L+L LTY+ P+ L L+ L+LS+N L+S + + + +L
Sbjct: 184 VLPDTVFQGLGNLHELVLAGNKLTYLQPALLCGLGELRELDLSRNALRS-VKANVFI-HL 241
Query: 138 GKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSN 197
+L L L ++ I+ + F LR L+L+ N + L T G L+ L L L++
Sbjct: 242 PRLQKLYLDRNLITAVAPRAFLGMKALRWLDLSHNRVAGLLEDTFPG--LLGLHVLRLAH 299
Query: 198 CHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANT 257
+ L F + L L L N + + L +L L+L + + +
Sbjct: 300 NAITS-LRPRTFKDLHFLEELQLGHNRIRQLG-EKTFEGLGQLEVLTLNDNQIHEVKVGA 357
Query: 258 FHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLIL 317
F + +++S N L + L L L + +S L RI TF ++ L+ L L
Sbjct: 358 FFGLFNVAVMNLSGNCLRSLPEHVFQGLGRLHSLHLEHSCLGRIRLHTFAGLSGLRRLFL 417
Query: 318 SGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLP 377
N + ++E L+ L L+L LT L +F LE L LS N L +L
Sbjct: 418 RDNSISSIEEQSLAGLSELLELDLTANQLTHLPRQLFQG---LGQLEYLLLSNNQLTMLS 474
Query: 378 D 378
+
Sbjct: 475 E 475
Score = 204 (76.9 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 108/414 (26%), Positives = 179/414 (43%)
Query: 89 SLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQS 148
S L L+ NL+ I +AF NL+ L L L + L+S ++ +LG L L L L ++
Sbjct: 75 STRALWLDGNNLSSIPSAAFQNLSSLDFLNLQGSWLRS-LEPQALLG-LQNLYHLHLERN 132
Query: 149 GISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDA 208
+ +L +F + L +L+L N L L+ L + L HL L+L L L +
Sbjct: 133 LLRSLAAGLFRHTPSLASLSLGNNLLGRLEEG--LFRGLSHLWDLNLGWNSLV-VLPDTV 189
Query: 209 FVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELD 268
F L L L+GN L+ ++ L L +L L L L + AN F LQ+L
Sbjct: 190 FQGLGNLHELVLAGNKLTYLQPAL-LCGLGELRELDLSRNALRSVKANVFIHLPRLQKLY 248
Query: 269 ISHNPLIDAFT--ALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLE 326
+ N LI A A L +++L LD+ ++ + + TF + L L L+ N + +L
Sbjct: 249 LDRN-LITAVAPRAFLG-MKALRWLDLSHNRVAGLLEDTFPGLLGLHVLRLAHNAITSLR 306
Query: 327 SGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLH------------ 374
F++L L L+L + + +L E F LE L L+ N +H
Sbjct: 307 PRTFKDLHFLEELQLGHNRIRQLGEKTFEG---LGQLEVLTLNDNQIHEVKVGAFFGLFN 363
Query: 375 VLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHEN-YTYPDLEELR---LSGNPLH 430
V + +R++P +++ L L + + + +T+ L LR L N +
Sbjct: 364 VAVMNLSGNCLRSLPEHVFQGLGRLHSLHLEHSCLGRIRLHTFAGLSGLRRLFLRDNSIS 423
Query: 431 VLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNLSMTSE 484
+ + ++ +LP +F + L L+NN L+M SE
Sbjct: 424 SIEEQSLAGLSELLELDLTAN--QLTHLPRQLFQGLGQLEYLLLSNNQLTMLSE 475
Score = 134 (52.2 bits), Expect = 7.5e-06, Sum P(2) = 7.5e-06
Identities = 79/297 (26%), Positives = 117/297 (39%)
Query: 208 AFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQEL 267
AF N + L L L G+ L + + AL L L+ L L L L A F L L
Sbjct: 93 AFQNLSSLDFLNLQGSWLRSLEPQ-ALLGLQNLYHLHLERNLLRSLAAGLFRHTPSLASL 151
Query: 268 DISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLES 327
+ +N L L L L L++G+++L + + F + +L L+L+GNKL L+
Sbjct: 152 SLGNNLLGRLEEGLFRGLSHLWDLNLGWNSLVVLPDTVFQGLGNLHELVLAGNKLTYLQP 211
Query: 328 GLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLH-VLPDS---TK-- 381
L L L L+L+ L + VF P L++L L N + V P + K
Sbjct: 212 ALLCGLGELRELDLSRNALRSVKANVFIH---LPRLQKLYLDRNLITAVAPRAFLGMKAL 268
Query: 382 ---QYSMRTIPTQIWKNFDFLVILFIL----NETVFHENYTYPDL---EELRLSGNPLHV 431
S + + F L+ L +L N T+ DL EEL+L N +
Sbjct: 269 RWLDLSHNRVAGLLEDTFPGLLGLHVLRLAHNAITSLRPRTFKDLHFLEELQLGHNRIRQ 328
Query: 432 LPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSFQ 488
L G +I + F N+ +NL+ N L E FQ
Sbjct: 329 L--GEKTFEGLGQLEVLTLNDNQIHEVKVGAFFGLFNVAVMNLSGNCLRSLPEHVFQ 383
Score = 52 (23.4 bits), Expect = 1.0e-20, Sum P(2) = 1.0e-20
Identities = 25/111 (22%), Positives = 41/111 (36%)
Query: 454 KIDYLPPNVFNNTRNITSLNLANNNLSMTSE-----LSFQFXXXXXXXXXXXXXXXXXTH 508
++ +LP +F + L L+NN L+M SE L F +
Sbjct: 445 QLTHLPRQLFQGLGQLEYLLLSNNQLTMLSEDVLGPLQRAFWLDLSHNRLETPAEGLFSS 504
Query: 509 ISPTV---LRHNRAITSIKLVG--------NPWKCDCNIADMWEWATREKG 548
+ LR+N T + G NPW C C + + ++A + G
Sbjct: 505 LGRLRYLNLRNNSLQTFVPQPGLERLWLDANPWDCSCPLKALRDFALQNPG 555
>UNIPROTKB|F1NG27 [details] [associations]
symbol:TLR3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0002756 "MyD88-independent toll-like receptor signaling
pathway" evidence=IEA] [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0004888 "transmembrane signaling receptor
activity" evidence=IEA] [GO:0034138 "toll-like receptor 3 signaling
pathway" evidence=IEA] [GO:0045087 "innate immune response"
evidence=IEA] [GO:0050729 "positive regulation of inflammatory
response" evidence=IEA] [GO:0051607 "defense response to virus"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007252 "I-kappaB
phosphorylation" evidence=IEA] [GO:0032722 "positive regulation of
chemokine production" evidence=IEA] [GO:0032728 "positive
regulation of interferon-beta production" evidence=IEA] [GO:0032735
"positive regulation of interleukin-12 production" evidence=IEA]
[GO:0032755 "positive regulation of interleukin-6 production"
evidence=IEA] [GO:0032757 "positive regulation of interleukin-8
production" evidence=IEA] [GO:0032760 "positive regulation of tumor
necrosis factor production" evidence=IEA] [GO:0034123 "positive
regulation of toll-like receptor signaling pathway" evidence=IEA]
[GO:0034346 "positive regulation of type III interferon production"
evidence=IEA] [GO:0042346 "positive regulation of NF-kappaB import
into nucleus" evidence=IEA] [GO:0043123 "positive regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IEA] [GO:0043330
"response to exogenous dsRNA" evidence=IEA] [GO:0045078 "positive
regulation of interferon-gamma biosynthetic process" evidence=IEA]
[GO:0045080 "positive regulation of chemokine biosynthetic process"
evidence=IEA] [GO:0045356 "positive regulation of interferon-alpha
biosynthetic process" evidence=IEA] [GO:0045359 "positive
regulation of interferon-beta biosynthetic process" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0046330 "positive
regulation of JNK cascade" evidence=IEA] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=IEA] [GO:0071260 "cellular response to mechanical
stimulus" evidence=IEA] InterPro:IPR000157 InterPro:IPR001611
InterPro:IPR027173 Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450
SMART:SM00255 GO:GO:0016021 GO:GO:0005737 GO:GO:0006952
GO:GO:0043123 GO:GO:0046330 GO:GO:0045944 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0032722
GO:GO:0032755 GO:GO:0051092 GO:GO:0032757 GO:GO:0071260
InterPro:IPR000372 SMART:SM00013 GO:GO:0032760 GO:GO:0043330
GO:GO:0032735 GO:GO:0042346 GO:GO:0045078 GO:GO:0032728
GO:GO:0007252 GO:GO:0045080 SUPFAM:SSF52200 GO:GO:0045359
GeneTree:ENSGT00680000099674 GO:GO:0034123 PANTHER:PTHR24365:SF5
GO:GO:0045356 GO:GO:0034346 OMA:LNLGYNI EMBL:AADN02031435
IPI:IPI00590386 Ensembl:ENSGALT00000021952 Uniprot:F1NG27
Length = 900
Score = 278 (102.9 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 134/484 (27%), Positives = 220/484 (45%)
Query: 15 DNPGLIT-INLNANPIQPVEGAFLVARS-LLYLYMQECTLSKINPQFFTNLTTLNKLDLS 72
D P IT ++++ N ++ ++ L S L+YL +SK+ P NL L L L
Sbjct: 53 DLPKNITGLDISHNQLKKLDPENLTEYSNLIYLNAGYNIISKLKPGLCKNLPLLQILKLE 112
Query: 73 GNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKS-HIDWT 131
N L + GVF ++L L L N+ + F L +L L+LS N LKS ++
Sbjct: 113 HNQLHELPDGVFASCSNLTELNLGY-NIIEVKNDPFKTLENLNILDLSHNHLKSANLGLQ 171
Query: 132 LVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVAT--TLGQNL-- 187
L NL +L L Q N D F +NT L +L+L+ N L + +G NL
Sbjct: 172 QQLKNLREL-VLYSNQITELNKEDLKFLSNTSLNSLDLSSNPLKEFHTGCLHAIG-NLFG 229
Query: 188 VHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPL--TKLHRLSL 245
+ L++++L K +E ++ T ++ L LS LS + + L+ L T L L+L
Sbjct: 230 LILNNVELGENRTKKLCTE---LSDTAIQNLSLSHVKLSHIN-RLTLQGLQGTNLTVLNL 285
Query: 246 RNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRST 305
LS + ++F + L+ L++ N +I+ + L L S+ HL++ S +I +
Sbjct: 286 SKNSLSVIEDDSFQWLSKLEYLNLEDNNIINVSSHLFYGLSSITHLNLINSLTGKIEDFS 345
Query: 306 FLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEE 365
F + L+ LI+ N + + +F L +L L L NC T L N T+ L
Sbjct: 346 FQWLHHLEYLIMDNNNFPRITTNMFTGLKNLKYLSLYNCN-TNLQRIT---NKTFVSLAN 401
Query: 366 LRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFI-LNET----VFHENYTYPDLE 420
RL VL + TK + T+ ++ + + L IL + LNE HE ++E
Sbjct: 402 SRLQ-----VL-NLTKT-RISTVESEAFSSLGQLKILDLGLNEINQELTGHEFEGLNNIE 454
Query: 421 ELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNLS 480
+ LS N L + + C + P+ F+ RN+T L+++NNN++
Sbjct: 455 YIYLSYNKNVTLRSESFIFVPSLRKLMLRKVGCNNLAISPSPFHPLRNLTVLDISNNNIA 514
Query: 481 MTSE 484
E
Sbjct: 515 NIRE 518
Score = 242 (90.2 bits), Expect = 9.5e-17, P = 9.5e-17
Identities = 134/507 (26%), Positives = 222/507 (43%)
Query: 7 VYNDR-RNLDNPGLITINLNANPIQPVE-GAFLVARSL--LYLYMQECT-LSKINPQFFT 61
V ND + L+N L ++L+ N ++ G ++L L LY + T L+K + +F +
Sbjct: 142 VKNDPFKTLEN--LNILDLSHNHLKSANLGLQQQLKNLRELVLYSNQITELNKEDLKFLS 199
Query: 62 NLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNL-TYISPSAFDNLNH--LKTLE 118
N T+LN LDLS NPL+ G + +L L+LN L + L+ ++ L
Sbjct: 200 N-TSLNSLDLSSNPLKEFHTGCLHAIGNLFGLILNNVELGENRTKKLCTELSDTAIQNLS 258
Query: 119 LSQNKLKSHIDWTLVLGNLG-KLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDL 177
LS KL SHI+ + G G L L+L ++ +S + D+ F + L LNL +N +I+
Sbjct: 259 LSHVKL-SHINRLTLQGLQGTNLTVLNLSKNSLSVIEDDSFQWLSKLEYLNLEDNNIIN- 316
Query: 178 DVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGN--PLSAADLSVALK 235
V++ L L + L+L N L G + + +F L L + N P ++ LK
Sbjct: 317 -VSSHLFYGLSSITHLNLINS-LTGKIEDFSFQWLHHLEYLIMDNNNFPRITTNMFTGLK 374
Query: 236 PLTKLHRLSLRNCG--LSRLPANTFHRF--TCLQELDISHNPLIDAFTALLSPLESLEHL 291
L LSL NC L R+ TF + LQ L+++ + + S L L+ L
Sbjct: 375 ---NLKYLSLYNCNTNLQRITNKTFVSLANSRLQVLNLTKTRISTVESEAFSSLGQLKIL 431
Query: 292 DMGYSNL-QRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRL- 349
D+G + + Q ++ F + +++ + LS NK TL S F + L L L G L
Sbjct: 432 DLGLNEINQELTGHEFEGLNNIEYIYLSYNKNVTLRSESFIFVPSLRKLMLRKVGCNNLA 491
Query: 350 -NETVFH--ENYTYPDLEELRLSG------NPLHVLPDSTKQYSMRTIPTQIWKNFDFLV 400
+ + FH N T D+ ++ N LH L Q++ ++WK +
Sbjct: 492 ISPSPFHPLRNLTVLDISNNNIANIREDLFNGLHELDILNLQHNNLA---RLWKCANPGG 548
Query: 401 ILFILNETVFHENYTYPDLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPP 460
+ L + P+L L L N +P ++ LP
Sbjct: 549 PVLFLKDV--------PNLHILNLKSNGFDEIPV--HVFKGLHQLKDLDLGSNNLNLLPA 598
Query: 461 NVFNNTRNITSLNLANNNLSMTSELSF 487
+F++ ++ +LNL N ++ E F
Sbjct: 599 TLFDDQTSLNTLNLQKNLITSVEENVF 625
Score = 141 (54.7 bits), Expect = 8.4e-06, P = 8.4e-06
Identities = 86/337 (25%), Positives = 146/337 (43%)
Query: 22 INLNANPIQPVEG-AFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIE 80
+NL N I V F S+ +L + KI F L L L + N I
Sbjct: 307 LNLEDNNIINVSSHLFYGLSSITHLNLINSLTGKIEDFSFQWLHHLEYLIMDNNNFPRIT 366
Query: 81 PGVFDPLTSLEYLMLNRCN--LTYISPSAFDNL--NHLKTLELSQNKLKSHIDWTLVLGN 136
+F L +L+YL L CN L I+ F +L + L+ L L++ ++ S ++ + +
Sbjct: 367 TNMFTGLKNLKYLSLYNCNTNLQRITNKTFVSLANSRLQVLNLTKTRI-STVE-SEAFSS 424
Query: 137 LGKLDTLDLRQSGISN-LPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDL 195
LG+L LDL + I+ L + F + + L+ N+ + L + + + L
Sbjct: 425 LGQLKILDLGLNEINQELTGHEFEGLNNIEYIYLSYNKNVTLRSESFIFVPSLRKLMLRK 484
Query: 196 SNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVAL-KPLTKLHRLSLRNCGLSRL- 253
C+ +S F L L +S N + A++ L L +L L+L++ L+RL
Sbjct: 485 VGCNNLA-ISPSPFHPLRNLTVLDISNNNI--ANIREDLFNGLHELDILNLQHNNLARLW 541
Query: 254 -PANTFHRFTCLQE------LDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTF 306
AN L++ L++ N + + L L+ LD+G +NL + + F
Sbjct: 542 KCANPGGPVLFLKDVPNLHILNLKSNGFDEIPVHVFKGLHQLKDLDLGSNNLNLLPATLF 601
Query: 307 LKMTSLKTLILSGNKLETLESGLF-QNLTHLSVLELN 342
TSL TL L N + ++E +F L LE++
Sbjct: 602 DDQTSLNTLNLQKNLITSVEENVFGPAFKSLRTLEMD 638
>FB|FBgn0261269 [details] [associations]
symbol:conv "convoluted" species:7227 "Drosophila
melanogaster" [GO:0035151 "regulation of tube size, open tracheal
system" evidence=IMP] [GO:0007424 "open tracheal system
development" evidence=IMP] [GO:0008045 "motor neuron axon guidance"
evidence=IMP] [GO:0035159 "regulation of tube length, open tracheal
system" evidence=IMP] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 EMBL:AE013599 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0008045
GeneTree:ENSGT00690000101816 GO:GO:0035159 InterPro:IPR026906
Pfam:PF13306 EMBL:EU814872 RefSeq:NP_610948.2 UniGene:Dm.23922
SMR:A1Z9N6 STRING:A1Z9N6 EnsemblMetazoa:FBtr0087540 GeneID:36588
KEGG:dme:Dmel_CG8561 UCSC:CG8561-RA CTD:36588 FlyBase:FBgn0261269
InParanoid:A1Z9N6 OMA:TIVCENT OrthoDB:EOG4ZGMT6 GenomeRNAi:36588
NextBio:799366 Uniprot:A1Z9N6
Length = 1092
Score = 279 (103.3 bits), Expect = 1.2e-20, P = 1.2e-20
Identities = 101/381 (26%), Positives = 183/381 (48%)
Query: 4 GHPVYNDRRN-LDN-PGLITINLNANPIQPVEGAFLVARSLL-YLYMQECTLSKINPQFF 60
G+ + N +RN N L ++++ N I+ +E + + L + + LS+++ F
Sbjct: 207 GNQLENLKRNQFKNLRELEVLDISHNQIKKLEAQHIADLTKLGWCNVSHNALSELSRGTF 266
Query: 61 TNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELS 120
+ L L LS N + ++ F + L L L+ LT I F ++ + T++L+
Sbjct: 267 ARNSVLKVLHLSHNQIARLDANSFRGMRFLRRLFLSDNVLTDIGRGTFGSIARIGTIDLA 326
Query: 121 QNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVA 180
+N+LK I++ + + ++ LDL ++ I+ + N F + + +N++ N L +L +
Sbjct: 327 RNRLKK-IEFQMFT-QMNYVELLDLAENNITKIEKNSF-KDIYQAIINVSHNAL-EL-IE 381
Query: 181 TTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKL 240
T +N V++ LDLS+ L S +F T LS N L+ + ++ +T L
Sbjct: 382 TAAFENCVNITVLDLSHNRLAN-FSRRSFDETTFATYFQLSYNNLTNL-AQIPIQNMTGL 439
Query: 241 HRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQR 300
L+ ++ +P N F + L +D+SHN + F + L SL +D+ +++++
Sbjct: 440 KVLNASYNSITEIPKNCFPKLYELHTIDVSHNNISSIFNGVFQTLFSLRSIDLSHNSMRE 499
Query: 301 ISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTY 360
I STF + +L + LS N+L ++ G LT L L LNN L +L +
Sbjct: 500 IKSSTFGTLPTLLEMDLSHNELVSVVRGSLAKLTSLRQLYLNNNQLEKL--------FQL 551
Query: 361 P-DLEELRLSGNPLHVLPDST 380
P L EL S N L +P T
Sbjct: 552 PISLNELYFSHNRLTNIPSGT 572
Score = 229 (85.7 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 101/403 (25%), Positives = 185/403 (45%)
Query: 18 GLITI-NLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPL 76
G+I + N N + + P+E F R L L + L + F NL L LD+S N +
Sbjct: 177 GIIRVTNGNLSDL-PIE-TFQPLRKLKTLDLHGNQLENLKRNQFKNLRELEVLDISHNQI 234
Query: 77 RIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGN 136
+ +E LT L + ++ L+ +S F + LK L LS N++ + +D G
Sbjct: 235 KKLEAQHIADLTKLGWCNVSHNALSELSRGTFARNSVLKVLHLSHNQI-ARLDANSFRG- 292
Query: 137 LGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLS 196
+ L L L + ++++ F + + ++LA N L ++ N V L LDL+
Sbjct: 293 MRFLRRLFLSDNVLTDIGRGTFGSIARIGTIDLARNRLKKIEFQMFTQMNYVEL--LDLA 350
Query: 197 NCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPAN 256
++ + +++F + + + +S N L + + A + + L L + L+
Sbjct: 351 ENNIT-KIEKNSFKDIYQA-IINVSHNALELIE-TAAFENCVNITVLDLSHNRLANFSRR 407
Query: 257 TFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLI 316
+F T +S+N L + + + L+ L+ Y+++ I ++ F K+ L T+
Sbjct: 408 SFDETTFATYFQLSYNNLTNLAQIPIQNMTGLKVLNASYNSITEIPKNCFPKLYELHTID 467
Query: 317 LSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPL-HV 375
+S N + ++ +G+FQ L L ++L++ + + + F T P L E+ LS N L V
Sbjct: 468 VSHNNISSIFNGVFQTLFSLRSIDLSHNSMREIKSSTFG---TLPTLLEMDLSHNELVSV 524
Query: 376 LPDS-TKQYSMRTIPTQIWKNFDFLVILF----ILNETVFHEN 413
+ S K S+R Q++ N + L LF LNE F N
Sbjct: 525 VRGSLAKLTSLR----QLYLNNNQLEKLFQLPISLNELYFSHN 563
Score = 223 (83.6 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 111/474 (23%), Positives = 191/474 (40%)
Query: 62 NLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQ 121
N+T L L+ S N + I F L L + ++ N++ I F L L++++LS
Sbjct: 435 NMTGLKVLNASYNSITEIPKNCFPKLYELHTIDVSHNNISSIFNGVFQTLFSLRSIDLSH 494
Query: 122 NKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVAT 181
N ++ T G L L +DL + + ++ A T LR L L N+L
Sbjct: 495 NSMREIKSSTF--GTLPTLLEMDLSHNELVSVVRGSLAKLTSLRQLYLNNNQL------E 546
Query: 182 TLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLH 241
L Q + L+ L S+ L + + L L LS N L + L +
Sbjct: 547 KLFQLPISLNELYFSHNRLTN-IPSGTWPVMNSLIYLDLSHNQLGDTLNGESFTGLLVVQ 605
Query: 242 RLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRI 301
RL L+N G+S+ P + + LQ L + +N + + L L L++ + ++ I
Sbjct: 606 RLKLQNNGISQPPKDAVAVMSTLQYLHLENNNITTLERSAFGKLPVLFELNLYGNQVKDI 665
Query: 302 SRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYP 361
S+ F + L TL LS N ++TL++ +F L L L+L+ LT+L+
Sbjct: 666 SKRAFEGLLQLLTLNLSSNGIQTLQNDIFVGLPSLRNLDLSFNSLTKLDNKTNGVLDDLL 725
Query: 362 DLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTYPDLEE 421
LE L LS N + + T S + IP + +N + L + + + L
Sbjct: 726 SLETLDLSHNRISFVTKKTFP-SHQYIPYNL-RNLNLSYNLMPI--LTYDITFGTKKLVR 781
Query: 422 LRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNLSM 481
L +S N ++ L G ++F+ +N++ L+L++N +
Sbjct: 782 LDVSHNQINDLRRGVISNFTSLQSLDMSYNELSNLKSEEHIFDLPQNLSWLDLSHNKIY- 840
Query: 482 TSELSFQFXXXXXXXXXXXXXXXXXTHISPTVLRHNRAITSIKLVGNPWKCDCN 535
L F + +++ R + + L GNP C CN
Sbjct: 841 --HLPFANLVKVKSLKYVDLTNNSLEDVPASIVGSMRNGSQVLLAGNPLHCGCN 892
Score = 209 (78.6 bits), Expect = 4.8e-13, P = 4.8e-13
Identities = 82/353 (23%), Positives = 149/353 (42%)
Query: 38 VARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNR 97
+A SL + + LS + + F L L LDL GN L ++ F L LE L ++
Sbjct: 172 IANSLGIIRVTNGNLSDLPIETFQPLRKLKTLDLHGNQLENLKRNQFKNLRELEVLDISH 231
Query: 98 CNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNV 157
+ + +L L +S N L T ++ L L L + I+ L N
Sbjct: 232 NQIKKLEAQHIADLTKLGWCNVSHNALSELSRGTFARNSV--LKVLHLSHNQIARLDANS 289
Query: 158 FANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRT 217
F +LR L L++N L D+ T G ++ + ++DL+ LK + F +
Sbjct: 290 FRGMRFLRRLFLSDNVLTDIGRGT-FG-SIARIGTIDLARNRLK-KIEFQMFTQMNYVEL 346
Query: 218 LYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDA 277
L L+ N ++ + + + K + + +++ + L + F + LD+SHN L +
Sbjct: 347 LDLAENNITKIEKN-SFKDIYQAI-INVSHNALELIETAAFENCVNITVLDLSHNRLANF 404
Query: 278 FTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLS 337
+ + Y+NL +++ MT LK L S N + + F L L
Sbjct: 405 SRRSFDETTFATYFQLSYNNLTNLAQIPIQNMTGLKVLNASYNSITEIPKNCFPKLYELH 464
Query: 338 VLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPT 390
+++++ ++ + VF ++ L + LS N + + ST T+PT
Sbjct: 465 TIDVSHNNISSIFNGVFQTLFS---LRSIDLSHNSMREIKSST----FGTLPT 510
Score = 198 (74.8 bits), Expect = 7.4e-12, P = 7.4e-12
Identities = 96/375 (25%), Positives = 168/375 (44%)
Query: 5 HPVYNDRRNLDN-PGLITIN---LNANPI-QPVEGAFLVARSLLYLYMQECTLSKINPQF 59
H D N ++ GL+ + L N I QP + A V +L YL+++ ++ +
Sbjct: 586 HNQLGDTLNGESFTGLLVVQRLKLQNNGISQPPKDAVAVMSTLQYLHLENNNITTLERSA 645
Query: 60 FTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLEL 119
F L L +L+L GN ++ I F+ L L L L+ + + F L L+ L+L
Sbjct: 646 FGKLPVLFELNLYGNQVKDISKRAFEGLLQLLTLNLSSNGIQTLQNDIFVGLPSLRNLDL 705
Query: 120 SQNKLKSHIDWTL-VLGNLGKLDTLDLRQSGISNLPDNVFANNTW----LRNLNLAENEL 174
S N L + T VL +L L+TLDL + IS + F ++ + LRNLNL+ N +
Sbjct: 706 SFNSLTKLDNKTNGVLDDLLSLETLDLSHNRISFVTKKTFPSHQYIPYNLRNLNLSYNLM 765
Query: 175 IDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVAL 234
L T G L LD+S+ + L N T L++L +S N LS +
Sbjct: 766 PILTYDITFGTK--KLVRLDVSHNQIND-LRRGVISNFTSLQSLDMSYNELSNLKSEEHI 822
Query: 235 KPLTK-LHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDM 293
L + L L L + + LP + L+ +D+++N L D +++ + + + +
Sbjct: 823 FDLPQNLSWLDLSHNKIYHLPFANLVKVKSLKYVDLTNNSLEDVPASIVGSMRNGSQVLL 882
Query: 294 GYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGL-TRLNET 352
+ L + LK L+ I +G L+++ G + ++ L++ L +E
Sbjct: 883 AGNPLHCGCNARPLKYFMLQQTI-AGEDLKSIYCGTPALIKDKQLISLDDEYLHCAEDEQ 941
Query: 353 VFHENYTYPDLEELR 367
++ Y L ++R
Sbjct: 942 EMYKGIDYEQLTDVR 956
Score = 192 (72.6 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 78/306 (25%), Positives = 136/306 (44%)
Query: 69 LDLSGNPLRIIEPGVFDPLTS-LEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSH 127
L + PL IE VF + + LE L L R NL+++ F L K L + + +
Sbjct: 103 LIIEETPLATIEDYVFYGVNNTLEQLHLLRTNLSHVGLLGFGILGKAKELVIDGHAFQQ- 161
Query: 128 IDWTLVLGN--LGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQ 185
+ L G L + + +S+LP F L+ L+L N+L +L +
Sbjct: 162 LPKDLFAGQEIANSLGIIRVTNGNLSDLPIETFQPLRKLKTLDLHGNQLENLK--RNQFK 219
Query: 186 NLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSL 245
NL L+ LD+S+ +K L + TKL +S N LS + + L L L
Sbjct: 220 NLRELEVLDISHNQIK-KLEAQHIADLTKLGWCNVSHNALSELSRGTFARN-SVLKVLHL 277
Query: 246 RNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRST 305
+ ++RL AN+F L+ L +S N L D + + +D+ + L++I
Sbjct: 278 SHNQIARLDANSFRGMRFLRRLFLSDNVLTDIGRGTFGSIARIGTIDLARNRLKKIEFQM 337
Query: 306 FLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHE--NYTYPDL 363
F +M ++ L L+ N + +E F+++ + +++ +++ L + F N T DL
Sbjct: 338 FTQMNYVELLDLAENNITKIEKNSFKDI-YQAIINVSHNALELIETAAFENCVNITVLDL 396
Query: 364 EELRLS 369
RL+
Sbjct: 397 SHNRLA 402
Score = 171 (65.3 bits), Expect = 6.2e-09, P = 6.2e-09
Identities = 97/361 (26%), Positives = 154/361 (42%)
Query: 24 LNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGV 83
LN N ++ + F + SL LY L+ I + + +L LDLS N L G
Sbjct: 540 LNNNQLEKL---FQLPISLNELYFSHNRLTNIPSGTWPVMNSLIYLDLSHNQLGDTLNGE 596
Query: 84 -FDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDT 142
F L ++ L L ++ A ++ L+ L L N + + ++ + G L L
Sbjct: 597 SFTGLLVVQRLKLQNNGISQPPKDAVAVMSTLQYLHLENNNITT-LERS-AFGKLPVLFE 654
Query: 143 LDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLS-NCHLK 201
L+L + + ++ F L LNL+ N + L +G L L +LDLS N K
Sbjct: 655 LNLYGNQVKDISKRAFEGLLQLLTLNLSSNGIQTLQNDIFVG--LPSLRNLDLSFNSLTK 712
Query: 202 GPLSEDAFVN-ATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSR--LPANTF 258
+ ++ L TL LS N +S P + +LRN LS +P T+
Sbjct: 713 LDNKTNGVLDDLLSLETLDLSHNRISFVTKKTF--PSHQYIPYNLRNLNLSYNLMPILTY 770
Query: 259 H-RFTC--LQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRST--FLKMTSLK 313
F L LD+SHN + D ++S SL+ LDM Y+ L + F +L
Sbjct: 771 DITFGTKKLVRLDVSHNQINDLRRGVISNFTSLQSLDMSYNELSNLKSEEHIFDLPQNLS 830
Query: 314 TLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPL 373
L LS NK+ L + L ++L N L + ++ + + ++ L+GNPL
Sbjct: 831 WLDLSHNKIYHLPFANLVKVKSLKYVDLTNNSLEDVPASIVG---SMRNGSQVLLAGNPL 887
Query: 374 H 374
H
Sbjct: 888 H 888
Score = 160 (61.4 bits), Expect = 5.8e-08, Sum P(2) = 5.8e-08
Identities = 62/222 (27%), Positives = 101/222 (45%)
Query: 139 KLDTLDLRQSGISNLPDNVF--ANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLS 196
K L + ++ ++ + D VF NNT L L+L L + + LG ++ +
Sbjct: 99 KARMLIIEETPLATIEDYVFYGVNNT-LEQLHLLRTNLSHVGL---LGFGILGKAKELVI 154
Query: 197 NCHLKGPLSEDAFVN---ATKLRTLYLSGNPLSAADLSV-ALKPLTKLHRLSLRNCGLSR 252
+ H L +D F A L + ++ LS DL + +PL KL L L L
Sbjct: 155 DGHAFQQLPKDLFAGQEIANSLGIIRVTNGNLS--DLPIETFQPLRKLKTLDLHGNQLEN 212
Query: 253 LPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSL 312
L N F L+ LDISHN + ++ L L ++ ++ L +SR TF + + L
Sbjct: 213 LKRNQFKNLRELEVLDISHNQIKKLEAQHIADLTKLGWCNVSHNALSELSRGTFARNSVL 272
Query: 313 KTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVF 354
K L LS N++ L++ F+ + L L L++ LT + F
Sbjct: 273 KVLHLSHNQIARLDANSFRGMRFLRRLFLSDNVLTDIGRGTF 314
Score = 52 (23.4 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 455 IDYLPPNVFNNTRNITSLNLANNNLSMTSELSF 487
++ + F N NIT L+L++N L+ S SF
Sbjct: 377 LELIETAAFENCVNITVLDLSHNRLANFSRRSF 409
>MGI|MGI:2443955 [details] [associations]
symbol:Lrig3 "leucine-rich repeats and immunoglobulin-like
domains 3" species:10090 "Mus musculus" [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:2443955 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101816 InterPro:IPR025875 Pfam:PF12799
HOGENOM:HOG000113380 HOVERGEN:HBG052353 CTD:121227 OMA:SHHQFVT
OrthoDB:EOG4K6G3K EMBL:AY505341 EMBL:BC065142 EMBL:AK044994
EMBL:AK078783 EMBL:AK129481 IPI:IPI00399981 RefSeq:NP_796126.4
UniGene:Mm.275586 PDB:3SO5 PDBsum:3SO5 ProteinModelPortal:Q6P1C6
SMR:Q6P1C6 PhosphoSite:Q6P1C6 PRIDE:Q6P1C6
Ensembl:ENSMUST00000074807 GeneID:320398 KEGG:mmu:320398
UCSC:uc007hhc.2 InParanoid:Q6P1C6 NextBio:396650 Bgee:Q6P1C6
Genevestigator:Q6P1C6 GermOnline:ENSMUSG00000020105 Uniprot:Q6P1C6
Length = 1117
Score = 277 (102.6 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 105/348 (30%), Positives = 168/348 (48%)
Query: 9 NDRRNLDNPGLITINLN-----ANPIQPVEGAFLVA-RSLLYLYMQECTLSKINPQFFTN 62
N+ + N G I+ N+ N I + L A +SL L + +S++ F
Sbjct: 108 NELETIPNLGSISANIRQLSLAGNAIDKILPEQLEAFQSLETLDLSNNNISELRTAFPP- 166
Query: 63 LTTLNKLDLSGNPLRIIEPGVFDPLTS-LEYLMLNRCNLTYISPSAFDNLNHLKTLELSQ 121
L L ++ N + +EPG FD L S L L LNR ++ I P F L L+ LEL++
Sbjct: 167 -LQLKYLYINNNRVSSMEPGYFDNLASTLLVLKLNRNRISAIPPKMF-KLPQLQHLELNR 224
Query: 122 NKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVAT 181
NK+K+ +D L LG L +L ++++G++ L D F + + L L N L ++
Sbjct: 225 NKIKN-VDG-LTFQGLGALKSLKMQRNGVTKLMDGAFWGLSNMEVLQLDHNNLTEITKGW 282
Query: 182 TLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLH 241
G L+ L L LS + +S DA+ KL L L+ N LS D S L L+ L+
Sbjct: 283 LYG--LLMLRELHLSQNAINR-ISPDAWEFCQKLSELDLTFNHLSRLDDSSFLG-LSLLN 338
Query: 242 RLSLRNCGLSRLPANTFHRFTCLQELDISHNPL---IDAFTALLSPLESLEHLDMGYSNL 298
L + N +S + F T L+ LD+ +N + I+ + S L+ L L + + +
Sbjct: 339 ALHIGNNKVSYIADCAFRGLTSLKTLDLRNNEISWTIEDMSGAFSGLDRLRQLILQGNRI 398
Query: 299 QRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGL 346
+ I++ F + +L+ L LSGN + +L+S F + L L LN L
Sbjct: 399 RSITKKAFAGLDTLEHLDLSGNAIMSLQSNAFSQMKKLQQLHLNTSSL 446
Score = 219 (82.2 bits), Expect = 4.1e-14, P = 4.1e-14
Identities = 91/356 (25%), Positives = 161/356 (45%)
Query: 22 INLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEP 81
+ LN N ++ + ++ ++ L + + KI P+ +L LDLS N + +
Sbjct: 103 VKLNNNELETIPNLGSISANIRQLSLAGNAIDKILPEQLEAFQSLETLDLSNNNISELRT 162
Query: 82 GVFDPLTSLEYLMLNRCNLTYISPSAFDNL-NHLKTLELSQNKLKSHIDWTLVLGNLGKL 140
F PL L+YL +N ++ + P FDNL + L L+L++N++ S I + L +L
Sbjct: 163 A-FPPL-QLKYLYINNNRVSSMEPGYFDNLASTLLVLKLNRNRI-SAIPPKMF--KLPQL 217
Query: 141 DTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHL 200
L+L ++ I N+ F L++L + N + L G L +++ L L + +L
Sbjct: 218 QHLELNRNKIKNVDGLTFQGLGALKSLKMQRNGVTKLMDGAFWG--LSNMEVLQLDHNNL 275
Query: 201 KGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHR 260
+++ LR L+LS N ++ A + KL L L LSRL ++F
Sbjct: 276 T-EITKGWLYGLLMLRELHLSQNAINRISPD-AWEFCQKLSELDLTFNHLSRLDDSSFLG 333
Query: 261 FTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQ-RIS--RSTFLKMTSLKTLIL 317
+ L L I +N + L SL+ LD+ + + I F + L+ LIL
Sbjct: 334 LSLLNALHIGNNKVSYIADCAFRGLTSLKTLDLRNNEISWTIEDMSGAFSGLDRLRQLIL 393
Query: 318 SGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPL 373
GN++ ++ F L L L+L+ + L F + L++L L+ + L
Sbjct: 394 QGNRIRSITKKAFAGLDTLEHLDLSGNAIMSLQSNAFSQ---MKKLQQLHLNTSSL 446
Score = 194 (73.4 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 75/274 (27%), Positives = 119/274 (43%)
Query: 6 PVYNDRRNLDNPGLITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTT 65
P Y D NL + L+ + LN N I + L +L + + ++ F L
Sbjct: 184 PGYFD--NLAST-LLVLKLNRNRISAIPPKMFKLPQLQHLELNRNKIKNVDGLTFQGLGA 240
Query: 66 LNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLK 125
L L + N + + G F L+++E L L+ NLT I+ L L+ L LSQN +
Sbjct: 241 LKSLKMQRNGVTKLMDGAFWGLSNMEVLQLDHNNLTEITKGWLYGLLMLRELHLSQNAIN 300
Query: 126 --SHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTL 183
S W KL LDL + +S L D+ F + L L++ N++ +A
Sbjct: 301 RISPDAWEFCQ----KLSELDLTFNHLSRLDDSSFLGLSLLNALHIGNNKVSY--IADCA 354
Query: 184 GQNLVHLDSLDLSNCHLKGPLSE--DAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLH 241
+ L L +LDL N + + + AF +LR L L GN + + A L L
Sbjct: 355 FRGLTSLKTLDLRNNEISWTIEDMSGAFSGLDRLRQLILQGNRIRSITKK-AFAGLDTLE 413
Query: 242 RLSLRNCGLSRLPANTFHRFTCLQELDISHNPLI 275
L L + L +N F + LQ+L ++ + L+
Sbjct: 414 HLDLSGNAIMSLQSNAFSQMKKLQQLHLNTSSLL 447
Score = 161 (61.7 bits), Expect = 7.6e-08, P = 7.6e-08
Identities = 75/324 (23%), Positives = 138/324 (42%)
Query: 52 LSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNL 111
LS I ++L +L ++ L+ N L I P + ++ L L + I P +
Sbjct: 86 LSFIQTSSLSHLQSLQEVKLNNNELETI-PNLGSISANIRQLSLAGNAIDKILPEQLEAF 144
Query: 112 NHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFAN-NTWLRNLNLA 170
L+TL+LS N + + L +L L + + +S++ F N + L L L
Sbjct: 145 QSLETLDLSNNNIS---ELRTAFPPL-QLKYLYINNNRVSSMEPGYFDNLASTLLVLKLN 200
Query: 171 ENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADL 230
N + + L L L+L+ +K + F L++L + N ++ +
Sbjct: 201 RNRISAIPPKMF---KLPQLQHLELNRNKIKN-VDGLTFQGLGALKSLKMQRNGVTKL-M 255
Query: 231 SVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEH 290
A L+ + L L + L+ + + L+EL +S N + + L
Sbjct: 256 DGAFWGLSNMEVLQLDHNNLTEITKGWLYGLLMLRELHLSQNAINRISPDAWEFCQKLSE 315
Query: 291 LDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLN 350
LD+ +++L R+ S+FL ++ L L + NK+ + F+ LT L L+L N ++
Sbjct: 316 LDLTFNHLSRLDDSSFLGLSLLNALHIGNNKVSYIADCAFRGLTSLKTLDLRN---NEIS 372
Query: 351 ETVFHENYTYPDLEELR---LSGN 371
T+ + + L+ LR L GN
Sbjct: 373 WTIEDMSGAFSGLDRLRQLILQGN 396
Score = 151 (58.2 bits), Expect = 9.2e-07, P = 9.2e-07
Identities = 67/273 (24%), Positives = 126/273 (46%)
Query: 85 DPLTS-LEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTL 143
DPL + + L L+ L++I S+ +L L+ ++L+ N+L++ + + N+ +L
Sbjct: 70 DPLPAWVTRLDLSHNRLSFIQTSSLSHLQSLQEVKLNNNELETIPNLGSISANIRQLS-- 127
Query: 144 DLRQSGISN-LPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKG 202
L + I LP+ + A + L L+L+ N + +L A Q L L ++N +
Sbjct: 128 -LAGNAIDKILPEQLEAFQS-LETLDLSNNNISELRTAFPPLQ----LKYLYINNNRVSS 181
Query: 203 PLSEDAFVN-ATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRF 261
+ F N A+ L L L+ N +SA + + L +L L L + + TF
Sbjct: 182 -MEPGYFDNLASTLLVLKLNRNRISA--IPPKMFKLPQLQHLELNRNKIKNVDGLTFQGL 238
Query: 262 TCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNK 321
L+ L + N + L ++E L + ++NL I++ + L+ L LS N
Sbjct: 239 GALKSLKMQRNGVTKLMDGAFWGLSNMEVLQLDHNNLTEITKGWLYGLLMLRELHLSQNA 298
Query: 322 LETLESGLFQNLTHLSVLELNNCGLTRLNETVF 354
+ + ++ LS L+L L+RL+++ F
Sbjct: 299 INRISPDAWEFCQKLSELDLTFNHLSRLDDSSF 331
Score = 147 (56.8 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 57/216 (26%), Positives = 108/216 (50%)
Query: 22 INLNANPIQPVEGAFLVARSLLY-LYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIE 80
+ L+ N + + +L +L L++ + +++I+P + L++LDL+ N L ++
Sbjct: 268 LQLDHNNLTEITKGWLYGLLMLRELHLSQNAINRISPDAWEFCQKLSELDLTFNHLSRLD 327
Query: 81 PGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHI-DWTLVLGNLGK 139
F L+ L L + ++YI+ AF L LKTL+L N++ I D + L +
Sbjct: 328 DSSFLGLSLLNALHIGNNKVSYIADCAFRGLTSLKTLDLRNNEISWTIEDMSGAFSGLDR 387
Query: 140 LDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDV-ATTLGQNL--VHLDSLDL- 195
L L L+ + I ++ FA L +L+L+ N ++ L A + + L +HL++ L
Sbjct: 388 LRQLILQGNRIRSITKKAFAGLDTLEHLDLSGNAIMSLQSNAFSQMKKLQQLHLNTSSLL 447
Query: 196 SNCHLKG-P--LSED---AFVNATKLRTLYLSGNPL 225
+C L+ P ++E+ +FVNA+ L G +
Sbjct: 448 CDCQLRWLPQWVAENNFQSFVNASCAHPQLLKGRSI 483
Score = 127 (49.8 bits), Expect = 0.00036, P = 0.00036
Identities = 71/289 (24%), Positives = 127/289 (43%)
Query: 218 LYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDA 277
L LS N LS S +L L L + L N L +P N +++L ++ N +
Sbjct: 79 LDLSHNRLSFIQTS-SLSHLQSLQEVKLNNNELETIP-NLGSISANIRQLSLAGNAIDKI 136
Query: 278 FTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTH-L 336
L +SLE LD+ +N+ + R+ F + LK L ++ N++ ++E G F NL L
Sbjct: 137 LPEQLEAFQSLETLDLSNNNISEL-RTAFPPL-QLKYLYINNNRVSSMEPGYFDNLASTL 194
Query: 337 SVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQY--SMRTIPTQ--- 391
VL+LN ++ + +F P L+ L L+ N + + T Q +++++ Q
Sbjct: 195 LVLKLNRNRISAIPPKMFK----LPQLQHLELNRNKIKNVDGLTFQGLGALKSLKMQRNG 250
Query: 392 IWKNFD--F--LVILFIL-----NETVFHENYTYP--DLEELRLSGNPLH-VLPTGNXXX 439
+ K D F L + +L N T + + Y L EL LS N ++ + P
Sbjct: 251 VTKLMDGAFWGLSNMEVLQLDHNNLTEITKGWLYGLLMLRELHLSQNAINRISPDAWEFC 310
Query: 440 XXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSFQ 488
++D + F + +L++ NN +S ++ +F+
Sbjct: 311 QKLSELDLTFNHLSRLD---DSSFLGLSLLNALHIGNNKVSYIADCAFR 356
>FB|FBgn0032479 [details] [associations]
symbol:CG16974 species:7227 "Drosophila melanogaster"
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 Gene3D:2.60.40.10 InterPro:IPR013783 EMBL:AE014134
InterPro:IPR003598 SMART:SM00408 InterPro:IPR003591 SMART:SM00369
HSSP:P07359 GeneTree:ENSGT00700000105954 FlyBase:FBgn0032479
ChiTaRS:CG16974 EMBL:BT022757 RefSeq:NP_001246018.1
RefSeq:NP_609610.2 UniGene:Dm.10738 SMR:Q9VK28 STRING:Q9VK28
EnsemblMetazoa:FBtr0080489 EnsemblMetazoa:FBtr0305555 GeneID:34713
KEGG:dme:Dmel_CG16974 UCSC:CG16974-RA InParanoid:Q9VK28 OMA:HRIRENC
GenomeRNAi:34713 NextBio:789834 Uniprot:Q9VK28
Length = 1257
Score = 242 (90.2 bits), Expect = 2.1e-20, Sum P(2) = 2.1e-20
Identities = 97/335 (28%), Positives = 151/335 (45%)
Query: 105 PSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWL 164
P +F+ +++ L L++N+L+ + W + L + ++ L++ + +SN L
Sbjct: 199 PRSFE---YMERLNLAENRLEC-LHWAIPLA-VRRVKVLEMSGNRLSNCSLLNLQYMKQL 253
Query: 165 RNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNP 224
+ L+L +EL L LG+ L L L+LS +L L D FV A KL LYLSGN
Sbjct: 254 QELHLDRSELTYLP-QRFLGE-LSELRMLNLSQ-NLLTELPRDIFVGALKLERLYLSGNR 310
Query: 225 LSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSP 284
LS + + L L L + L P N F R L++L + N L L
Sbjct: 311 LSVLPFML-FQTAADLQVLDLSDNRLLSFPDNFFARNGQLRQLHLQRNQLKSIGKHSLYS 369
Query: 285 LESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNC 344
L L LD+ ++L I R F + L L +SGN L L S +FQ+L L L+L+
Sbjct: 370 LRELRQLDLSQNSLSVIDRKAFESLDHLLALNVSGNNLTLLSSIIFQSLHALRQLDLSRN 429
Query: 345 GLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVI--- 401
+L +F + L LR+ P+ + +Y + Q+ +L +
Sbjct: 430 QFKQLPSGLFQRQRS---LVLLRIDETPIEQFSNWISRYDESLVDPQVLHRLRYLSVQQN 486
Query: 402 --LFILNETVFHENYTYPDLEELRLSGNPLHVLPT 434
L L T+F P++ EL L+ N L LPT
Sbjct: 487 RKLTYLPATLFANT---PNIRELLLAENGLLQLPT 518
Score = 188 (71.2 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 92/324 (28%), Positives = 145/324 (44%)
Query: 69 LDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHI 128
L++SGN L + L+ L L+R LTY+ L+ L+ L LSQN L + +
Sbjct: 232 LEMSGNRLSNCSLLNLQYMKQLQELHLDRSELTYLPQRFLGELSELRMLNLSQNLL-TEL 290
Query: 129 DWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLV 188
+ +G L KL+ L L + +S LP +F L+ L+L++N L+ +N
Sbjct: 291 PRDIFVGAL-KLERLYLSGNRLSVLPFMLFQTAADLQVLDLSDNRLLSFP-DNFFARN-G 347
Query: 189 HLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNC 248
L L L LK + + + + +LR L LS N LS D A + L L L++
Sbjct: 348 QLRQLHLQRNQLKS-IGKHSLYSLRELRQLDLSQNSLSVIDRK-AFESLDHLLALNVSGN 405
Query: 249 GLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMG------YSN-LQRI 301
L+ L + F L++LD+S N + L SL L + +SN + R
Sbjct: 406 NLTLLSSIIFQSLHALRQLDLSRNQFKQLPSGLFQRQRSLVLLRIDETPIEQFSNWISRY 465
Query: 302 SRSTF--LKMTSLKTLILSGN-KLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENY 358
S + L+ L + N KL L + LF N ++ L L GL +L + +
Sbjct: 466 DESLVDPQVLHRLRYLSVQQNRKLTYLPATLFANTPNIRELLLAENGLLQLPTQISGLSR 525
Query: 359 TYPDLEELRLSGNPLHVLPDSTKQ 382
L+ L + GN L LP++ K+
Sbjct: 526 ----LQRLSVRGNSLGSLPENIKE 545
Score = 178 (67.7 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 85/293 (29%), Positives = 136/293 (46%)
Query: 80 EPGVFDPLTSLEYLMLNRCN-LTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLG 138
+P F+ + L L NR L + P A + +K LE+S N+L S+ L L +
Sbjct: 198 QPRSFEYMERLN-LAENRLECLHWAIPLA---VRRVKVLEMSGNRL-SNCS-LLNLQYMK 251
Query: 139 KLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNC 198
+L L L +S ++ LP + LR LNL++N L +L +G + L+ L LS
Sbjct: 252 QLQELHLDRSELTYLPQRFLGELSELRMLNLSQNLLTELPRDIFVGA--LKLERLYLSGN 309
Query: 199 HLKGPLSEDAFVNATKLRTLYLSGNPL-SAADLSVALKPLTKLHRLSLRNCGLSRLPANT 257
L L F A L+ L LS N L S D A +L +L L+ L + ++
Sbjct: 310 RLS-VLPFMLFQTAADLQVLDLSDNRLLSFPDNFFARNG--QLRQLHLQRNQLKSIGKHS 366
Query: 258 FHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLIL 317
+ L++LD+S N L L+ L L++ +NL +S F + +L+ L L
Sbjct: 367 LYSLRELRQLDLSQNSLSVIDRKAFESLDHLLALNVSGNNLTLLSSIIFQSLHALRQLDL 426
Query: 318 SGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETV--FHENYTYPD-LEELR 367
S N+ + L SGLFQ L +L ++ + + + + + E+ P L LR
Sbjct: 427 SRNQFKQLPSGLFQRQRSLVLLRIDETPIEQFSNWISRYDESLVDPQVLHRLR 479
Score = 156 (60.0 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 93/354 (26%), Positives = 142/354 (40%)
Query: 36 FLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLML 95
F A L L + + L FF L +L L N L+ I L L L L
Sbjct: 319 FQTAADLQVLDLSDNRLLSFPDNFFARNGQLRQLHLQRNQLKSIGKHSLYSLRELRQLDL 378
Query: 96 NRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPD 155
++ +L+ I AF++L+HL L +S N L + +++ +L L LDL ++ LP
Sbjct: 379 SQNSLSVIDRKAFESLDHLLALNVSGNNLT--LLSSIIFQSLHALRQLDLSRNQFKQLPS 436
Query: 156 NVFANNTWLRNLNLAE-------NELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDA 208
+F L L + E N + D + Q L L L + L
Sbjct: 437 GLFQRQRSLVLLRIDETPIEQFSNWISRYDESLVDPQVLHRLRYLSVQQNRKLTYLPATL 496
Query: 209 FVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELD 268
F N +R L L+ N L L + L++L RLS+R L LP N L L+
Sbjct: 497 FANTPNIRELLLAENGL--LQLPTQISGLSRLQRLSVRGNSLGSLPEN-IKELRQLHYLN 553
Query: 269 ISHNPL-IDA----FTALLSPLE-SLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKL 322
I N D TA L+ SL H M + + ST T L + +++
Sbjct: 554 ILGNEYQCDCSMYWLTAWLANTSTSLRH-QMPQAQ-NHSNGST--NQTPLDSYESIDHQI 609
Query: 323 ETLESGLFQNLTHLSVLELNNCGL---TRLNETVFHENYTYPDLEELRLSGNPL 373
+ L+ L VL NC + + +E H+ + LE ++SG+P+
Sbjct: 610 DALKCQYGYRGDMLRVLSKLNCSVPTVVQFSEPKMHKLLSTAKLE-CQISGSPV 662
Score = 134 (52.2 bits), Expect = 9.3e-09, Sum P(2) = 9.3e-09
Identities = 82/345 (23%), Positives = 139/345 (40%)
Query: 115 KTLELSQNKLKS--HIDWTLVLGNLGKLDT--LDLR---QSGISNLPDNVFANNTWLRNL 167
+++E+ +++L S H+D T GN+ KL+ +DLR Q +S ++ N L ++
Sbjct: 104 ESVEVEEHELPSVGHVDPT---GNVFKLNCEHVDLRRVNQELLSQRSSHINYNQLMLAHV 160
Query: 168 NLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATK----LRTLYLSGN 223
+ + L L L + LK + F + + L L+ N
Sbjct: 161 PADRSNPLKLP-------QLESLREFSWQSSELKDETLMELFTRQPRSFEYMERLNLAEN 213
Query: 224 PLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLS 283
L ++ L + ++ L + LS LQEL + + L L
Sbjct: 214 RLECLHWAIPLA-VRRVKVLEMSGNRLSNCSLLNLQYMKQLQELHLDRSELTYLPQRFLG 272
Query: 284 PLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNN 343
L L L++ + L + R F+ L+ L LSGN+L L LFQ L VL+L++
Sbjct: 273 ELSELRMLNLSQNLLTELPRDIFVGALKLERLYLSGNRLSVLPFMLFQTAADLQVLDLSD 332
Query: 344 CGLTRLNETVFHENYTYPDLE----ELRLSG-NPLHVLPD----STKQYSMRTIPTQIWK 394
L + F N L +L+ G + L+ L + Q S+ I + ++
Sbjct: 333 NRLLSFPDNFFARNGQLRQLHLQRNQLKSIGKHSLYSLRELRQLDLSQNSLSVIDRKAFE 392
Query: 395 NFDFLVILFIL-NETVFHENYTYPDLEELR---LSGNPLHVLPTG 435
+ D L+ L + N + + L LR LS N LP+G
Sbjct: 393 SLDHLLALNVSGNNLTLLSSIIFQSLHALRQLDLSRNQFKQLPSG 437
Score = 134 (52.2 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 78/314 (24%), Positives = 141/314 (44%)
Query: 40 RSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCN 99
+ L L++ L+ + +F L+ L L+LS N L + +F LE L L+
Sbjct: 251 KQLQELHLDRSELTYLPQRFLGELSELRMLNLSQNLLTELPRDIFVGALKLERLYLSGNR 310
Query: 100 LTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFA 159
L+ + F L+ L+LS N+L S D N G+L L L+++ + ++ +
Sbjct: 311 LSVLPFMLFQTAADLQVLDLSDNRLLSFPD-NFFARN-GQLRQLHLQRNQLKSIGKHSLY 368
Query: 160 NNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLY 219
+ LR L+L++N L +D ++L HL +L++S +L LS F + LR L
Sbjct: 369 SLRELRQLDLSQNSLSVIDRKAF--ESLDHLLALNVSGNNLT-LLSSIIFQSLHALRQLD 425
Query: 220 LSGN-----P--LSAADLSVALKPL--TKLHRLS--LRNCGLSRLPANTFHRFTCLQELD 268
LS N P L S+ L + T + + S + S + HR L+ L
Sbjct: 426 LSRNQFKQLPSGLFQRQRSLVLLRIDETPIEQFSNWISRYDESLVDPQVLHR---LRYLS 482
Query: 269 ISHNPLIDAFTA-LLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLES 327
+ N + A L + ++ L + + L ++ + ++ L+ L + GN L +L
Sbjct: 483 VQQNRKLTYLPATLFANTPNIRELLLAENGLLQLP-TQISGLSRLQRLSVRGNSLGSLPE 541
Query: 328 GL--FQNLTHLSVL 339
+ + L +L++L
Sbjct: 542 NIKELRQLHYLNIL 555
Score = 127 (49.8 bits), Expect = 0.00041, P = 0.00041
Identities = 61/236 (25%), Positives = 107/236 (45%)
Query: 19 LITINLNANPIQPVEGAFLVARSLL-YLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLR 77
L ++L+ N + F L L++Q L I +L L +LDLS N L
Sbjct: 325 LQVLDLSDNRLLSFPDNFFARNGQLRQLHLQRNQLKSIGKHSLYSLRELRQLDLSQNSLS 384
Query: 78 IIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGN- 136
+I+ F+ L L L ++ NLT +S F +L+ L+ L+LS+N+ K
Sbjct: 385 VIDRKAFESLDHLLALNVSGNNLTLLSSIIFQSLHALRQLDLSRNQFKQLPSGLFQRQRS 444
Query: 137 --LGKLDTLDLRQ--SGISNLPDNVFANNTW--LRNLNLAENELIDLDVATTLGQNLVHL 190
L ++D + Q + IS +++ LR L++ +N + + TL N ++
Sbjct: 445 LVLLRIDETPIEQFSNWISRYDESLVDPQVLHRLRYLSVQQNRKLTY-LPATLFANTPNI 503
Query: 191 DSLDLSNCHLKGPLSEDAFVNA-TKLRTLYLSGNPLSAADLSVALKPLTKLHRLSL 245
L L+ G L ++ ++L+ L + GN L + L +K L +LH L++
Sbjct: 504 RELLLAE---NGLLQLPTQISGLSRLQRLSVRGNSLGS--LPENIKELRQLHYLNI 554
Score = 88 (36.0 bits), Expect = 2.1e-20, Sum P(2) = 2.1e-20
Identities = 24/89 (26%), Positives = 39/89 (43%)
Query: 454 KIDYLPPNVFNNTRNITSLNLANNNLSMTSELSFQFXXXXXXXXXXXXXXXXXTHISPTV 513
K+ YLP +F NT NI L LA N L +L Q + P
Sbjct: 488 KLTYLPATLFANTPNIRELLLAENGLL---QLPTQISGLSRLQRLSVRGNSLGS--LPEN 542
Query: 514 LRHNRAITSIKLVGNPWKCDCNIADMWEW 542
++ R + + ++GN ++CDC++ + W
Sbjct: 543 IKELRQLHYLNILGNEYQCDCSMYWLTAW 571
>FB|FBgn0243486 [details] [associations]
symbol:rdo "reduced ocelli" species:7227 "Drosophila
melanogaster" [GO:0008056 "ocellus development" evidence=IMP]
InterPro:IPR001611 PROSITE:PS51450 EMBL:AE014134 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 GeneTree:ENSGT00700000104286
GO:GO:0008056 EMBL:BT004502 RefSeq:NP_609861.1 UniGene:Dm.21796
SMR:Q9VJA9 MINT:MINT-990018 STRING:Q9VJA9
EnsemblMetazoa:FBtr0081029 GeneID:35077 KEGG:dme:Dmel_CG15151
UCSC:CG15151-RA CTD:35077 FlyBase:FBgn0243486 InParanoid:Q9VJA9
OMA:FRGQDNL OrthoDB:EOG4CZ8WX GenomeRNAi:35077 NextBio:791738
Uniprot:Q9VJA9
Length = 741
Score = 259 (96.2 bits), Expect = 4.7e-20, Sum P(2) = 4.7e-20
Identities = 88/316 (27%), Positives = 154/316 (48%)
Query: 9 NDRRNLDNPGLITINLNANPI-QPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLN 67
N+ R DN L+ ++L+ N + + F L L + + ++ ++ + F L+ L
Sbjct: 124 NNFRGQDN--LLELDLSKNKVLRMASSTFRHLTDLRRLNLADNSIVELVQRNFFMLSRLK 181
Query: 68 KLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSH 127
LDLSGNPL+ ++P VF + L+ L C L I+P ++ L L L+L +N+ K
Sbjct: 182 YLDLSGNPLQDLQPDVFRDVPELKVLKCRNCQLKKINPQMYNLLPLLSELDLGRNEFK-F 240
Query: 128 IDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNL 187
+D ++ +L + L + +S + D +F L +L+L+ N L + + L L
Sbjct: 241 LDKD-EFRDVKRLTKVLLDGNQLSVVVDQLFRMQKSLNHLDLSYNRLAKVPNDSFL--QL 297
Query: 188 VHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPL-SAADLSVALKPLTKLHRLSLR 246
+L LDLS L L + + + L TL +SGN L ++ + + +L L++
Sbjct: 298 TNLTFLDLSYNKLVR-LEPQSIRSLSNLLTLNISGNVLMDLREMRETFELIPQLTHLAIA 356
Query: 247 NCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTF 306
+ G +P H F L+ L+IS N L + ++ P LE LD+ + L IS T
Sbjct: 357 DMGT--MPVGLLHPFKQLRYLNISGNSLNNTALEVIDPCRELEFLDLSRNQLHGISEDTV 414
Query: 307 LKMTSLKTLILSGNKL 322
L++ ++ + L N L
Sbjct: 415 LRIQGIRNVRLDNNPL 430
Score = 200 (75.5 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 96/359 (26%), Positives = 156/359 (43%)
Query: 25 NANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVF 84
N+ I P F+ L L + + L I + F L L LDLS N + I F
Sbjct: 70 NSITIGPALRQFM---KLEILRITDSNLPAIGAESFWGLKYLRILDLSKNNITNITENNF 126
Query: 85 DPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLD 144
+L L L++ + ++ S F +L L+ L L+ N + + + L +L LD
Sbjct: 127 RGQDNLLELDLSKNKVLRMASSTFRHLTDLRRLNLADNSIVELVQRNFFM--LSRLKYLD 184
Query: 145 LRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDS-LDLSNCHLKGP 203
L + + +L +VF + L+ L +L ++ NL+ L S LDL K
Sbjct: 185 LSGNPLQDLQPDVFRDVPELKVLKCRNCQLKKINPQM---YNLLPLLSELDLGRNEFKF- 240
Query: 204 LSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTC 263
L +D F + +L + L GN LS + + L+ L L L+++P ++F + T
Sbjct: 241 LDKDEFRDVKRLTKVLLDGNQLSVV-VDQLFRMQKSLNHLDLSYNRLAKVPNDSFLQLTN 299
Query: 264 LQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQ--RISRSTFLKMTSLKTLILSGNK 321
L LD+S+N L+ + L +L L++ + L R R TF + L L ++
Sbjct: 300 LTFLDLSYNKLVRLEPQSIRSLSNLLTLNISGNVLMDLREMRETFELIPQLTHLAIAD-- 357
Query: 322 LETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDST 380
+ T+ GL L L ++ LN T +LE L LS N LH + + T
Sbjct: 358 MGTMPVGLLHPFKQLRYLNISG---NSLNNTALEVIDPCRELEFLDLSRNQLHGISEDT 413
Score = 165 (63.1 bits), Expect = 9.2e-10, Sum P(2) = 9.2e-10
Identities = 67/276 (24%), Positives = 121/276 (43%)
Query: 214 KLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNP 273
KL L ++ + L A + L L L L ++ + N F L ELD+S N
Sbjct: 83 KLEILRITDSNLPAIGAE-SFWGLKYLRILDLSKNNITNITENNFRGQDNLLELDLSKNK 141
Query: 274 LIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNL 333
++ ++ L L L++ +++ + + F ++ LK L LSGN L+ L+ +F+++
Sbjct: 142 VLRMASSTFRHLTDLRRLNLADNSIVELVQRNFFMLSRLKYLDLSGNPLQDLQPDVFRDV 201
Query: 334 THLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQIW 393
L VL+ NC L ++N +++ P L EL L N L D + ++ + T++
Sbjct: 202 PELKVLKCRNCQLKKINPQMYN---LLPLLSELDLGRNEFKFL-DKDEFRDVKRL-TKVL 256
Query: 394 KNFDFLVILFILNETVFHENYTYPDLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXC 453
+ + L ++ + +F + L L LS N L +P N
Sbjct: 257 LDGNQLSVVV---DQLFRMQKS---LNHLDLSYNRLAKVP--NDSFLQLTNLTFLDLSYN 308
Query: 454 KIDYLPPNVFNNTRNITSLNLANNNLSMTSELSFQF 489
K+ L P + N+ +LN++ N L E+ F
Sbjct: 309 KLVRLEPQSIRSLSNLLTLNISGNVLMDLREMRETF 344
Score = 152 (58.6 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 82/328 (25%), Positives = 149/328 (45%)
Query: 22 INLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPL-RII 79
++L+ N I + E F +LL L + + + ++ F +LT L +L+L+ N + ++
Sbjct: 111 LDLSKNNITNITENNFRGQDNLLELDLSKNKVLRMASSTFRHLTDLRRLNLADNSIVELV 170
Query: 80 EPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGK 139
+ F L+ L+YL L+ L + P F ++ LK L+ +LK I+ + L
Sbjct: 171 QRNFF-MLSRLKYLDLSGNPLQDLQPDVFRDVPELKVLKCRNCQLKK-IN-PQMYNLLPL 227
Query: 140 LDTLDLRQSGISNLPDNVFANNTWLRNLNLAENEL-IDLDVATTLGQNLVHLDSLDLSNC 198
L LDL ++ L + F + L + L N+L + +D + ++L HLD LS
Sbjct: 228 LSELDLGRNEFKFLDKDEFRDVKRLTKVLLDGNQLSVVVDQLFRMQKSLNHLD---LSYN 284
Query: 199 HLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTF 258
L + D+F+ T L L LS N L + +++ L+ L L++ L L
Sbjct: 285 RL-AKVPNDSFLQLTNLTFLDLSYNKLVRLEPQ-SIRSLSNLLTLNISGNVLMDL-REMR 341
Query: 259 HRFTCLQELDISHNPLIDAFT---ALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTL 315
F + +L +H + D T LL P + L +L++ ++L + L+ L
Sbjct: 342 ETFELIPQL--THLAIADMGTMPVGLLHPFKQLRYLNISGNSLNNTALEVIDPCRELEFL 399
Query: 316 ILSGNKLETLESGLFQNLTHLSVLELNN 343
LS N+L + + + + L+N
Sbjct: 400 DLSRNQLHGISEDTVLRIQGIRNVRLDN 427
Score = 137 (53.3 bits), Expect = 9.5e-07, Sum P(2) = 9.5e-07
Identities = 94/380 (24%), Positives = 150/380 (39%)
Query: 31 PVEGA--FLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLT 88
P GA F + L L + + ++ I F L +LDLS N + + F LT
Sbjct: 95 PAIGAESFWGLKYLRILDLSKNNITNITENNFRGQDNLLELDLSKNKVLRMASSTFRHLT 154
Query: 89 SLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKS-HIDWTLVLGNLGKLDTLDLRQ 147
L L L ++ + F L+ LK L+LS N L+ D V ++ +L L R
Sbjct: 155 DLRRLNLADNSIVELVQRNFFMLSRLKYLDLSGNPLQDLQPD---VFRDVPELKVLKCRN 211
Query: 148 SGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSED 207
+ + ++ L L+L NE LD +++ L + L L + +
Sbjct: 212 CQLKKINPQMYNLLPLLSELDLGRNEFKFLDKDEF--RDVKRLTKVLLDGNQLS-VVVDQ 268
Query: 208 AFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQEL 267
F L L LS N L+ L+ LT L L L L RL + + L L
Sbjct: 269 LFRMQKSLNHLDLSYNRLAKVPNDSFLQ-LTNLTFLDLSYNKLVRLEPQSIRSLSNLLTL 327
Query: 268 DISHNPLIDAFTALLSPLESLEHLD-MGYSNLQRISRSTFLKMTSLKTLILSGNKLETLE 326
+IS N L+D + E + L + +++ + L+ L +SGN L
Sbjct: 328 NISGNVLMD-LREMRETFELIPQLTHLAIADMGTMPVGLLHPFKQLRYLNISGNSLNNTA 386
Query: 327 SGLFQNLTHLSVLELNNCGLTRLNE-TVFHENYTYPDLEELRLSGNPLHVLPDSTKQYSM 385
+ L L+L+ L ++E TV + +RL NPL + D +
Sbjct: 387 LEVIDPCRELEFLDLSRNQLHGISEDTVLR----IQGIRNVRLDNNPL--ICDECHMGKL 440
Query: 386 RTIPTQI-WKNFDFLVILFI 404
+ Q+ WK +D I F+
Sbjct: 441 INVVRQLQWK-WDTYPICFL 459
Score = 133 (51.9 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 88/372 (23%), Positives = 152/372 (40%)
Query: 187 LVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLR 246
L +L LDLS ++ ++E+ F L L LS N + S + LT L RL+L
Sbjct: 105 LKYLRILDLSKNNITN-ITENNFRGQDNLLELDLSKNKVLRM-ASSTFRHLTDLRRLNLA 162
Query: 247 NCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTF 306
+ + L F + L+ LD+S NPL D + + L+ L L++I+ +
Sbjct: 163 DNSIVELVQRNFFMLSRLKYLDLSGNPLQDLQPDVFRDVPELKVLKCRNCQLKKINPQMY 222
Query: 307 LKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEEL 366
+ L L L N+ + L+ F+++ L+ + L+ L+ + + +F + L L
Sbjct: 223 NLLPLLSELDLGRNEFKFLDKDEFRDVKRLTKVLLDGNQLSVVVDQLFRMQKS---LNHL 279
Query: 367 RLSGNPLHVLP-DSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTYPDLEEL--- 422
LS N L +P DS Q + N FL + + N+ V E + L L
Sbjct: 280 DLSYNRLAKVPNDSFLQLT----------NLTFLDLSY--NKLVRLEPQSIRSLSNLLTL 327
Query: 423 RLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNLSMT 482
+SGN L + + +P + + + + LN++ N+L+ T
Sbjct: 328 NISGNVL--MDLREMRETFELIPQLTHLAIADMGTMPVGLLHPFKQLRYLNISGNSLNNT 385
Query: 483 SELSFQFXXXXXXXXXXXXXXXXXTHISP-TVLRHNRAITSIKLVGNPWKCD-CNIADM- 539
+ + IS TVLR + I +++L NP CD C++ +
Sbjct: 386 A---LEVIDPCRELEFLDLSRNQLHGISEDTVLRI-QGIRNVRLDNNPLICDECHMGKLI 441
Query: 540 -------WEWAT 544
W+W T
Sbjct: 442 NVVRQLQWKWDT 453
Score = 128 (50.1 bits), Expect = 8.6e-06, Sum P(2) = 8.6e-06
Identities = 62/268 (23%), Positives = 116/268 (43%)
Query: 215 LRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPL 274
++ + + G P ++ + AL+ KL L + + L + A +F L+ LD+S N +
Sbjct: 60 VKVIIIRG-PRNSITIGPALRQFMKLEILRITDSNLPAIGAESFWGLKYLRILDLSKNNI 118
Query: 275 IDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLT 334
+ ++L LD+ + + R++ STF +T L+ L L+ N + L F L+
Sbjct: 119 TNITENNFRGQDNLLELDLSKNKVLRMASSTFRHLTDLRRLNLADNSIVELVQRNFFMLS 178
Query: 335 HLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWK 394
L L+L+ L L VF + P+L+ L+ L + + + Y++ +P +
Sbjct: 179 RLKYLDLSGNPLQDLQPDVFRD---VPELKVLKCRNCQLKKI--NPQMYNL--LP--LLS 229
Query: 395 NFDFLVILFILNETVFHENYTYPDLEELR---LSGNPLHVLPTGNXXXXXXXXXXXXXXX 451
D NE F + + D++ L L GN L V+ +
Sbjct: 230 ELDLG-----RNEFKFLDKDEFRDVKRLTKVLLDGNQLSVVV--DQLFRMQKSLNHLDLS 282
Query: 452 XCKIDYLPPNVFNNTRNITSLNLANNNL 479
++ +P + F N+T L+L+ N L
Sbjct: 283 YNRLAKVPNDSFLQLTNLTFLDLSYNKL 310
Score = 60 (26.2 bits), Expect = 4.7e-20, Sum P(2) = 4.7e-20
Identities = 20/69 (28%), Positives = 32/69 (46%)
Query: 620 TNSRKTRAAPSYINMEKLNSKSFLTLGNFGLISVGVIILSAMVYFSFYARHLYRTKQQRI 679
T+ + A+ SY +E + LG + + VIILS + FS R Y T++ +
Sbjct: 484 TDEEQNAASTSYNFLEHGGLNTLAILGGIIFVLIAVIILSLVACFS-KNRARYYTREDHL 542
Query: 680 RRNTFKSPC 688
N +S C
Sbjct: 543 --NGSESKC 549
>MGI|MGI:2444651 [details] [associations]
symbol:Lingo4 "leucine rich repeat and Ig domain containing
4" species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 MGI:MGI:2444651 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00690000101682 HOGENOM:HOG000246971
HOVERGEN:HBG057546 CTD:339398 eggNOG:NOG306417 OrthoDB:EOG49KFQ7
EMBL:BC117866 EMBL:BC117867 EMBL:AK042286 IPI:IPI00273210
RefSeq:NP_796224.1 UniGene:Mm.213001 ProteinModelPortal:Q149C3
SMR:Q149C3 PhosphoSite:Q149C3 PRIDE:Q149C3
Ensembl:ENSMUST00000050975 GeneID:320747 KEGG:mmu:320747
UCSC:uc008qgb.1 InParanoid:Q149C3 NextBio:397357 Bgee:Q149C3
CleanEx:MM_LINGO4 Genevestigator:Q149C3 Uniprot:Q149C3
Length = 593
Score = 254 (94.5 bits), Expect = 5.3e-20, Sum P(2) = 5.3e-20
Identities = 83/255 (32%), Positives = 123/255 (48%)
Query: 22 INLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIE 80
++L+ N + +E GAF +SLL L +Q L + P F+ LT L LDL N + +
Sbjct: 89 LDLSYNQLSTLEPGAFHGLQSLLTLRLQGNRLRIVGPGIFSGLTALTLLDLRLNQIVLFL 148
Query: 81 PGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKL 140
G F L SL+ L + +L +++P AF L L T+ L + L S + L L L L
Sbjct: 149 DGAFSELGSLQQLEVGDNHLVFVAPGAFAGLAKLSTITLERCNL-STVPG-LALAQLPAL 206
Query: 141 DTLDLRQSGISNLPDNVFANNTWLRNLNLAENELID-LDVATTLGQNLVHLDSLDLSNCH 199
L LR+ I LP L+ L + ++ LD + +G NL SL ++ C+
Sbjct: 207 VALRLRELDIERLPAGALRGLGQLKELEIHHWPSLEALDPGSLVGLNL---SSLAITRCN 263
Query: 200 LKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFH 259
L + A + + LR L LS NP+SA L PL +L L L L+ + A+ FH
Sbjct: 264 LSS-VPFQALHHLSFLRILDLSQNPISAIPAR-RLSPLVRLQELRLSGACLTSIAAHAFH 321
Query: 260 RFTCLQELDISHNPL 274
T LD++ N L
Sbjct: 322 GLTAFHLLDVADNAL 336
Score = 226 (84.6 bits), Expect = 7.2e-17, Sum P(2) = 7.2e-17
Identities = 89/289 (30%), Positives = 128/289 (44%)
Query: 61 TNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELS 120
+ L L +LDLS N L +EPG F L SL L L L + P F L L L+L
Sbjct: 81 SRLGQLQELDLSYNQLSTLEPGAFHGLQSLLTLRLQGNRLRIVGPGIFSGLTALTLLDLR 140
Query: 121 QNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVA 180
N++ +D LG L L++ + + + FA L + L L +
Sbjct: 141 LNQIVLFLDGAF--SELGSLQQLEVGDNHLVFVAPGAFAGLAKLSTITLERCNLSTVP-G 197
Query: 181 TTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNP-LSAADLSVALKPLTK 239
L Q L L +L L ++ L A +L+ L + P L A D +L L
Sbjct: 198 LALAQ-LPALVALRLRELDIER-LPAGALRGLGQLKELEIHHWPSLEALDPG-SLVGLN- 253
Query: 240 LHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTAL-LSPLESLEHLDMGYSNL 298
L L++ C LS +P H + L+ LD+S NP I A A LSPL L+ L + + L
Sbjct: 254 LSSLAITRCNLSSVPFQALHHLSFLRILDLSQNP-ISAIPARRLSPLVRLQELRLSGACL 312
Query: 299 QRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLT 347
I+ F +T+ L ++ N L+TLE F + L L L+ LT
Sbjct: 313 TSIAAHAFHGLTAFHLLDVADNALQTLEETAFPSPDKLVTLRLSGNPLT 361
Score = 211 (79.3 bits), Expect = 3.3e-15, Sum P(2) = 3.3e-15
Identities = 93/311 (29%), Positives = 136/311 (43%)
Query: 69 LDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHI 128
LDLSGN L ++ G+ L L+ L L+ L+ + P AF L L TL L N+L+ I
Sbjct: 65 LDLSGNRLWGLQRGMLSRLGQLQELDLSYNQLSTLEPGAFHGLQSLLTLRLQGNRLR--I 122
Query: 129 DWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLV 188
+ L L LDLR + I D F+ L+ L + +N L+ + G L
Sbjct: 123 VGPGIFSGLTALTLLDLRLNQIVLFLDGAFSELGSLQQLEVGDNHLVFVAPGAFAG--LA 180
Query: 189 HLDSLDLSNCHLKG-P---LSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLS 244
L ++ L C+L P L++ + A +LR L + P A L+ L +L L
Sbjct: 181 KLSTITLERCNLSTVPGLALAQLPALVALRLRELDIERLPAGA------LRGLGQLKELE 234
Query: 245 LRNC-GLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISR 303
+ + L L + L L I+ L L L L LD+ + + I
Sbjct: 235 IHHWPSLEALDPGSLVGLN-LSSLAITRCNLSSVPFQALHHLSFLRILDLSQNPISAIPA 293
Query: 304 STFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPD- 362
+ L+ L LSG L ++ + F LT +L++ + L L ET F PD
Sbjct: 294 RRLSPLVRLQELRLSGACLTSIAAHAFHGLTAFHLLDVADNALQTLEETAFPS----PDK 349
Query: 363 LEELRLSGNPL 373
L LRLSGNPL
Sbjct: 350 LVTLRLSGNPL 360
Score = 170 (64.9 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 81/277 (29%), Positives = 123/277 (44%)
Query: 81 PGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKL 140
PG PL + E L L+ L + L L+ L+LS N+L S ++ G L L
Sbjct: 55 PGGL-PLDT-ELLDLSGNRLWGLQRGMLSRLGQLQELDLSYNQL-STLEPGAFHG-LQSL 110
Query: 141 DTLDLRQSGISNLPDNVFANNTWLRNLNLAENELI-DLDVATTLGQNLVHLDSLDLSNCH 199
TL L+ + + + +F+ T L L+L N+++ LD A + L L L++ + H
Sbjct: 111 LTLRLQGNRLRIVGPGIFSGLTALTLLDLRLNQIVLFLDGAFS---ELGSLQQLEVGDNH 167
Query: 200 LKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFH 259
L ++ AF KL T+ L LS +AL L L L LR + RLPA
Sbjct: 168 LVF-VAPGAFAGLAKLSTITLERCNLSTVP-GLALAQLPALVALRLRELDIERLPAGALR 225
Query: 260 RFTCLQELDISHNPLIDAFT-ALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILS 318
L+EL+I H P ++A L L +L L + NL + ++ L+ L LS
Sbjct: 226 GLGQLKELEIHHWPSLEALDPGSLVGL-NLSSLAITRCNLSSVPFQALHHLSFLRILDLS 284
Query: 319 GNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFH 355
N + + + L L L L+ LT + FH
Sbjct: 285 QNPISAIPARRLSPLVRLQELRLSGACLTSIAAHAFH 321
Score = 128 (50.1 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 79/304 (25%), Positives = 122/304 (40%)
Query: 133 VLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDS 192
+L LG+L LDL + +S L F L L L N L + G + L
Sbjct: 79 MLSRLGQLQELDLSYNQLSTLEPGAFHGLQSLLTLRLQGNRLRIVGPGIFSGLTALTLLD 138
Query: 193 LDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSR 252
L L+ L + AF L+ L + N L A L KL ++L C LS
Sbjct: 139 LRLNQIVL---FLDGAFSELGSLQQLEVGDNHLVFVAPG-AFAGLAKLSTITLERCNLST 194
Query: 253 LPANTFHRFTCL-----QELDISHNPLIDAFTALLSPLESLEHLDMGY-SNLQRISRSTF 306
+P + L +ELDI P L L L+ L++ + +L+ + +
Sbjct: 195 VPGLALAQLPALVALRLRELDIERLP-----AGALRGLGQLKELEIHHWPSLEALDPGSL 249
Query: 307 LKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEEL 366
+ + +L +L ++ L ++ FQ L HLS L + + ++ L+EL
Sbjct: 250 VGL-NLSSLAITRCNLSSVP---FQALHHLSFLRILDLSQNPISAIPARRLSPLVRLQEL 305
Query: 367 RLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTYPD-LEELRLS 425
RLSG L S ++ + F L + +T+ + PD L LRLS
Sbjct: 306 RLSGACL----TSIAAHAFHGLTA-----FHLLDVADNALQTLEETAFPSPDKLVTLRLS 356
Query: 426 GNPL 429
GNPL
Sbjct: 357 GNPL 360
Score = 112 (44.5 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 31/98 (31%), Positives = 49/98 (50%)
Query: 29 IQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLT 88
++ ++ LV +L L + C LS + Q +L+ L LDLS NP+ I PL
Sbjct: 241 LEALDPGSLVGLNLSSLAITRCNLSSVPFQALHHLSFLRILDLSQNPISAIPARRLSPLV 300
Query: 89 SLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKS 126
L+ L L+ LT I+ AF L L+++ N L++
Sbjct: 301 RLQELRLSGACLTSIAAHAFHGLTAFHLLDVADNALQT 338
Score = 61 (26.5 bits), Expect = 5.3e-20, Sum P(2) = 5.3e-20
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 520 ITSIKLVGNPWKCDCNIADMWEWATREKGDIG 551
+ +++L GNP CDC + +W R + D G
Sbjct: 350 LVTLRLSGNPLTCDCRL--LWLLRLRRRLDFG 379
>UNIPROTKB|Q8AVI4 [details] [associations]
symbol:shoc2 "Leucine-rich repeat protein SHOC-2"
species:8355 "Xenopus laevis" [GO:0000164 "protein phosphatase type
1 complex" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0019903 "protein
phosphatase binding" evidence=ISS] [GO:0046579 "positive regulation
of Ras protein signal transduction" evidence=ISS] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR027036 PROSITE:PS51450 GO:GO:0005634
InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875 Pfam:PF12799
GO:GO:0046579 GO:GO:0019903 GO:GO:0000164 HSSP:P07359 CTD:8036
PANTHER:PTHR23155:SF38 EMBL:BC042263 RefSeq:NP_001080350.1
UniGene:Xl.21982 ProteinModelPortal:Q8AVI4 GeneID:380042
KEGG:xla:380042 Xenbase:XB-GENE-493506 Uniprot:Q8AVI4
Length = 577
Score = 268 (99.4 bits), Expect = 5.6e-20, P = 5.6e-20
Identities = 135/454 (29%), Positives = 200/454 (44%)
Query: 24 LNANPIQ--PVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEP 81
L N +Q P E LV +L+ L + E +L+ + P NL L LDL N LR I P
Sbjct: 125 LYGNKLQSLPAEVGNLV--NLVKLALSENSLTSL-PDSLDNLKKLCMLDLRHNKLREIPP 181
Query: 82 GVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLD 141
V+ L+SL L L +T + L L L + +NK+K H+ +G L L
Sbjct: 182 VVYR-LSSLTTLFLRFNRITAVEKD-LKMLPKLTMLSIRENKIK-HLP--AEIGELCNLI 236
Query: 142 TLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLK 201
TLD+ + + +LP + N T + NL+L NEL+DL T+G NL L L L L
Sbjct: 237 TLDVAHNQLEHLPKEI-GNCTQITNLDLQHNELLDLP--DTIG-NLSSLSRLGLRYNRLS 292
Query: 202 G-PLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSL-RNCGLSRLPANTFH 259
P S ++L L L N +S + L L K++ L+L RNC S P
Sbjct: 293 AVPRS---LSKCSELDELNLENNNISTLPEGL-LSSLVKVNSLTLARNCFQS-YPVGGPS 347
Query: 260 RFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSG 319
+F+ + L++ HN + + S + L L+M + L + F TS+ L L+
Sbjct: 348 QFSSIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLD-FGTWTSMVELNLAT 406
Query: 320 NKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFH-ENYTYPDLEELRLSGNPLHV--L 376
N+L + + L + VL L+N L +L + + DLEE +L P + L
Sbjct: 407 NQLTKIPEDV-SGLVSIEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYL 465
Query: 377 PDSTK----QYSMRTIPTQIWKNFDFLVILFILNETVFH---ENYTYPDLEELRLSGNP- 428
D K + T+P I + L L + + H E T +LEEL L+ NP
Sbjct: 466 KDLQKLVLTNNQLTTLPRGIG-HLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPN 524
Query: 429 LHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNV 462
LH LP C + +LPP +
Sbjct: 525 LHSLP---FELALCSKLSIMSIENCPLSHLPPQI 555
Score = 211 (79.3 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 103/364 (28%), Positives = 163/364 (44%)
Query: 19 LITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRI 78
L T+ L N I VE + L L ++E + + P L L LD++ N L
Sbjct: 189 LTTLFLRFNRITAVEKDLKMLPKLTMLSIRENKIKHL-PAEIGELCNLITLDVAHNQLEH 247
Query: 79 IEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLG 138
+ P T + L L L + P NL+ L L L N+L S + +L
Sbjct: 248 L-PKEIGNCTQITNLDLQHNELLDL-PDTIGNLSSLSRLGLRYNRL-SAVPRSL--SKCS 302
Query: 139 KLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNC 198
+LD L+L + IS LP+ + ++ + +L LA N V + ++ SL++ +
Sbjct: 303 ELDELNLENNNISTLPEGLLSSLVKVNSLTLARNCFQSYPVGGPSQFSSIY--SLNMEHN 360
Query: 199 HL-KGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANT 257
+ K P F A L L + N L++ L T + L+L L+++P +
Sbjct: 361 RINKIPFG--IFSRAKVLSKLNMKDNQLTSLPLDFGT--WTSMVELNLATNQLTKIPEDV 416
Query: 258 FHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRS-TFLKMTSLKTLI 316
++ L +S+N L+ + L L LD+ + L+ + +LK L+ L+
Sbjct: 417 -SGLVSIEVLILSNN-LLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLK--DLQKLV 472
Query: 317 LSGNKLETLESGL--FQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNP-L 373
L+ N+L TL G+ NLTHL + E N LT L E + T +LEEL L+ NP L
Sbjct: 473 LTNNQLTTLPRGIGHLTNLTHLGLGE--NL-LTHLPEEIG----TLENLEELYLNDNPNL 525
Query: 374 HVLP 377
H LP
Sbjct: 526 HSLP 529
Score = 193 (73.0 bits), Expect = 9.8e-12, P = 9.8e-12
Identities = 114/406 (28%), Positives = 170/406 (41%)
Query: 31 PVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSL 90
PV L + LYLY + L + P NL L KL LS N L + P D L L
Sbjct: 111 PVSIKDLTQITELYLYGNK--LQSL-PAEVGNLVNLVKLALSENSLTSL-PDSLDNLKKL 166
Query: 91 EYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGI 150
L L L I P + L+ L TL L N++ + ++ L + L KL L +R++ I
Sbjct: 167 CMLDLRHNKLREIPPVVY-RLSSLTTLFLRFNRITA-VEKDLKM--LPKLTMLSIRENKI 222
Query: 151 SNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFV 210
+LP + L L++A N+L L +G N + +LDL + L D
Sbjct: 223 KHLPAEI-GELCNLITLDVAHNQLEHLP--KEIG-NCTQITNLDLQHNELLD--LPDTIG 276
Query: 211 NATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDIS 270
N + L L L N LSA S L ++L L+L N +S LP + L ++
Sbjct: 277 NLSSLSRLGLRYNRLSAVPRS--LSKCSELDELNLENNNISTLPEGLLSSLVKVNSLTLA 334
Query: 271 HNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLF 330
N S S+ L+M ++ + +I F + L L + N+L +L F
Sbjct: 335 RNCFQSYPVGGPSQFSSIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLD-F 393
Query: 331 QNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQY-SMRTIP 389
T + L L LT++ E V +E L LS N L LP +R +
Sbjct: 394 GTWTSMVELNLATNQLTKIPEDVSG----LVSIEVLILSNNLLKKLPHGIGNLRKLRELD 449
Query: 390 TQIWKNFDFLVILFILNETVFHENYTYPDLEELRLSGNPLHVLPTG 435
+ K + + NE + + DL++L L+ N L LP G
Sbjct: 450 LEENK------LESLPNEIAYLK-----DLQKLVLTNNQLTTLPRG 484
Score = 171 (65.3 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 76/236 (32%), Positives = 107/236 (45%)
Query: 20 ITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRII 79
+T+ N PV G + S+ L M+ ++KI F+ L+KL++ N L +
Sbjct: 331 LTLARNCFQSYPVGGPSQFS-SIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSL 389
Query: 80 EPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGK 139
P F TS+ L L LT I P L ++ L LS N LK +GNL K
Sbjct: 390 -PLDFGTWTSMVELNLATNQLTKI-PEDVSGLVSIEVLILSNNLLKKLPHG---IGNLRK 444
Query: 140 LDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCH 199
L LDL ++ + +LP+ + A L+ L L N+L L NL HL + H
Sbjct: 445 LRELDLEENKLESLPNEI-AYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTH 503
Query: 200 LKGPLSEDAFVNATKLRTLYLSGNP-LSAADLSVALKPLTKLHRLSLRNCGLSRLP 254
L P N L LYL+ NP L + +AL +KL +S+ NC LS LP
Sbjct: 504 L--PEEIGTLEN---LEELYLNDNPNLHSLPFELAL--CSKLSIMSIENCPLSHLP 552
>RGD|1560339 [details] [associations]
symbol:Lgr6 "leucine-rich repeat-containing G protein-coupled
receptor 6" species:10116 "Rattus norvegicus" [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016500 "protein-hormone receptor
activity" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000276 InterPro:IPR002131 Pfam:PF00001 PRINTS:PR00237
PRINTS:PR00373 PROSITE:PS51450 RGD:1560339 GO:GO:0016021
InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0016500 GeneTree:ENSGT00650000092962 CTD:59352
KO:K08399 OrthoDB:EOG4SQWW8 OMA:AYGKAPS IPI:IPI00213568
RefSeq:XP_001062538.1 RefSeq:XP_573455.1 ProteinModelPortal:D3ZJU9
Ensembl:ENSRNOT00000006969 GeneID:498233 KEGG:rno:498233
UCSC:RGD:1560339 NextBio:699115 Uniprot:D3ZJU9
Length = 965
Score = 272 (100.8 bits), Expect = 5.8e-20, P = 5.8e-20
Identities = 88/323 (27%), Positives = 157/323 (48%)
Query: 17 PGLITINLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNP 75
P L ++ L+AN I V E +F SL +L++ + L++I + NL L + L+ N
Sbjct: 138 PSLQSLRLDANLISLVPERSFEGLSSLRHLWLDDNALTEIPVRALNNLPALQAMTLALNR 197
Query: 76 LRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLG 135
+R I F LTSL L L+ + ++ +F+ L++L+TL+L+ N+L+ ++ + +
Sbjct: 198 IRHIPDYAFQNLTSLVVLHLHNNRIQHVGTHSFEGLHNLETLDLNYNELQ---EFPVAIR 254
Query: 136 NLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDL 195
LG+L L + I +P+ F N L+ ++ +N + V + Q L L +L L
Sbjct: 255 TLGRLQELGFHNNNIKAIPEKAFMGNPLLQTIHFYDNPI--QFVGRSAFQYLSKLHTLSL 312
Query: 196 SNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPA 255
+ + + ++ TL +G L A + + L +L L L + + LP+
Sbjct: 313 NGATDIQEFPDLKGTTSLEILTLTRAGIRLLPAGMC---QQLPRLRILELSHNQIEELPS 369
Query: 256 NTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTL 315
HR L+E+ + HN + + S L SL+ LD+ ++ ++ I F + SL L
Sbjct: 370 --LHRCQKLEEIGLQHNRIWEIGADTFSQLSSLQALDLSWNAIRAIHPEAFSTLRSLVKL 427
Query: 316 ILSGNKLETLESGLFQNLTHLSV 338
L+ N+L TL L HL +
Sbjct: 428 DLTDNQLTTLPLAGLGGLMHLKL 450
Score = 242 (90.2 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 100/353 (28%), Positives = 159/353 (45%)
Query: 22 INLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIE 80
+ L+ N + + AF SL L +Q L I + L +L L L N + ++
Sbjct: 95 LRLSGNHLSHIPRQAFSGLHSLKILMLQSNQLRGIPAEALWELPSLQSLRLDANLISLVP 154
Query: 81 PGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKL 140
F+ L+SL +L L+ LT I A +NL L+ + L+ N+++ HI NL L
Sbjct: 155 ERSFEGLSSLRHLWLDDNALTEIPVRALNNLPALQAMTLALNRIR-HIP-DYAFQNLTSL 212
Query: 141 DTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVAT-TLGQNLVHLDSLDLSNCH 199
L L + I ++ + F L L+L NEL + VA TLG+ L L N +
Sbjct: 213 VVLHLHNNRIQHVGTHSFEGLHNLETLDLNYNELQEFPVAIRTLGR----LQELGFHNNN 268
Query: 200 LKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNC----------- 248
+K + E AF+ L+T++ NP+ S A + L+KLH LSL
Sbjct: 269 IKA-IPEKAFMGNPLLQTIHFYDNPIQFVGRS-AFQYLSKLHTLSLNGATDIQEFPDLKG 326
Query: 249 ------------GLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYS 296
G+ LPA + L+ L++SHN I+ +L + LE + + ++
Sbjct: 327 TTSLEILTLTRAGIRLLPAGMCQQLPRLRILELSHNQ-IEELPSL-HRCQKLEEIGLQHN 384
Query: 297 NLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRL 349
+ I TF +++SL+ L LS N + + F L L L+L + LT L
Sbjct: 385 RIWEIGADTFSQLSSLQALDLSWNAIRAIHPEAFSTLRSLVKLDLTDNQLTTL 437
Score = 234 (87.4 bits), Expect = 7.8e-16, P = 7.8e-16
Identities = 108/353 (30%), Positives = 157/353 (44%)
Query: 49 ECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAF 108
E LS++ P LT LDLS N L ++PG+F L LE L L+ +L++I AF
Sbjct: 54 ELGLSEV-PADLDPLTAY--LDLSMNNLTELQPGLFHHLRFLEELRLSGNHLSHIPRQAF 110
Query: 109 DNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLN 168
L+ LK L L N+L+ I L L L +L L + IS +P+ F + LR+L
Sbjct: 111 SGLHSLKILMLQSNQLRG-IP-AEALWELPSLQSLRLDANLISLVPERSFEGLSSLRHLW 168
Query: 169 LAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAA 228
L +N L ++ V NL L ++ L+ ++ + + AF N T L L+L N +
Sbjct: 169 LDDNALTEIPVRAL--NNLPALQAMTLALNRIRH-IPDYAFQNLTSLVVLHLHNNRIQHV 225
Query: 229 DLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFT--ALL-SPL 285
+ + L L L L L P LQEL HN I A A + +PL
Sbjct: 226 GTH-SFEGLHNLETLDLNYNELQEFPV-AIRTLGRLQELGF-HNNNIKAIPEKAFMGNPL 282
Query: 286 ESLEHLDMGYSN-LQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNC 344
H Y N +Q + RS F ++ L TL L+G + E + T L +L L
Sbjct: 283 LQTIHF---YDNPIQFVGRSAFQYLSKLHTLSLNG-ATDIQEFPDLKGTTSLEILTLTRA 338
Query: 345 GLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQ---IWK 394
G+ L + + P L L LS N + LP + + I Q IW+
Sbjct: 339 GIRLLPAGMCQQ---LPRLRILELSHNQIEELPSLHRCQKLEEIGLQHNRIWE 388
Score = 211 (79.3 bits), Expect = 2.5e-13, P = 2.5e-13
Identities = 100/345 (28%), Positives = 149/345 (43%)
Query: 44 YLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYI 103
YL + L+++ P F +L L +L LSGN L I F L SL+ LML L I
Sbjct: 70 YLDLSMNNLTELQPGLFHHLRFLEELRLSGNHLSHIPRQAFSGLHSLKILMLQSNQLRGI 129
Query: 104 SPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTW 163
A L L++L L N L S + G L L L L + ++ +P N
Sbjct: 130 PAEALWELPSLQSLRLDAN-LISLVPERSFEG-LSSLRHLWLDDNALTEIPVRALNNLPA 187
Query: 164 LRNLNLAENELIDL-DVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSG 222
L+ + LA N + + D A QNL L L L N ++ + +F L TL L+
Sbjct: 188 LQAMTLALNRIRHIPDYAF---QNLTSLVVLHLHNNRIQH-VGTHSFEGLHNLETLDLNY 243
Query: 223 NPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALL 282
N L + VA++ L +L L N + +P F LQ + NP+ +
Sbjct: 244 NELQ--EFPVAIRTLGRLQELGFHNNNIKAIPEKAFMGNPLLQTIHFYDNPIQFVGRSAF 301
Query: 283 SPLESLEHLDM-GYSNLQRISRSTFLK-MTSLKTLILSGNKLETLESGLFQNLTHLSVLE 340
L L L + G +++Q LK TSL+ L L+ + L +G+ Q L L +LE
Sbjct: 302 QYLSKLHTLSLNGATDIQEFPD---LKGTTSLEILTLTRAGIRLLPAGMCQQLPRLRILE 358
Query: 341 LNNCGLTRLNETVFHENYTYPDLEELRLSGNPL-HVLPDSTKQYS 384
L++ + L H LEE+ L N + + D+ Q S
Sbjct: 359 LSHNQIEELPS--LHR---CQKLEEIGLQHNRIWEIGADTFSQLS 398
Score = 163 (62.4 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 67/246 (27%), Positives = 107/246 (43%)
Query: 138 GKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSN 197
G + + D + G+S +P ++ +L +L+ N L +L L +L L+ L LS
Sbjct: 45 GIMLSADCSELGLSEVPADLDPLTAYL---DLSMNNLTELQPG--LFHHLRFLEELRLSG 99
Query: 198 CHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANT 257
HL + AF L+ L L N L AL L L L L +S +P +
Sbjct: 100 NHLSH-IPRQAFSGLHSLKILMLQSNQLRGIPAE-ALWELPSLQSLRLDANLISLVPERS 157
Query: 258 FHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLIL 317
F + L+ L + N L + L+ L +L+ + + + ++ I F +TSL L L
Sbjct: 158 FEGLSSLRHLWLDDNALTEIPVRALNNLPALQAMTLALNRIRHIPDYAFQNLTSLVVLHL 217
Query: 318 SGNKLETLESGLFQNLTHLSVLELNNCGLT----------RLNETVFHENYTYPDLEELR 367
N+++ + + F+ L +L L+LN L RL E FH N + E
Sbjct: 218 HNNRIQHVGTHSFEGLHNLETLDLNYNELQEFPVAIRTLGRLQELGFHNN-NIKAIPEKA 276
Query: 368 LSGNPL 373
GNPL
Sbjct: 277 FMGNPL 282
>FB|FBgn0264089 [details] [associations]
symbol:sli "slit" species:7227 "Drosophila melanogaster"
[GO:0031012 "extracellular matrix" evidence=IDA] [GO:0008347 "glial
cell migration" evidence=IMP] [GO:0050919 "negative chemotaxis"
evidence=IMP] [GO:0007509 "mesoderm migration involved in
gastrulation" evidence=IMP] [GO:0005578 "proteinaceous
extracellular matrix" evidence=TAS] [GO:0008078 "mesodermal cell
migration" evidence=IMP] [GO:0007411 "axon guidance"
evidence=IGI;IMP;IPI] [GO:0035385 "Roundabout signaling pathway"
evidence=IGI] [GO:0030182 "neuron differentiation" evidence=IMP]
[GO:0010632 "regulation of epithelial cell migration" evidence=IMP]
[GO:2000274 "regulation of epithelial cell migration, open tracheal
system" evidence=IMP] [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0007427 "epithelial cell migration, open tracheal
system" evidence=IMP] [GO:0016199 "axon midline choice point
recognition" evidence=IMP] [GO:0001764 "neuron migration"
evidence=IMP] [GO:0007432 "salivary gland boundary specification"
evidence=IMP] [GO:0035050 "embryonic heart tube development"
evidence=IMP] [GO:0022409 "positive regulation of cell-cell
adhesion" evidence=IMP] [GO:0071666 "Slit-Robo signaling complex"
evidence=IDA] [GO:0048495 "Roundabout binding" evidence=IPI]
[GO:0008201 "heparin binding" evidence=IDA] [GO:0003151 "outflow
tract morphogenesis" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0008406 "gonad development" evidence=IMP] [GO:0007502
"digestive tract mesoderm development" evidence=IMP] [GO:0046331
"lateral inhibition" evidence=IMP] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 EMBL:AE013599
GO:GO:0005886 GO:GO:0001764 GO:GO:0008406 GO:GO:0005578
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0016199 GO:GO:0008201 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
Reactome:REACT_113552 GO:GO:0048813 PROSITE:PS01186 GO:GO:0046331
InterPro:IPR001791 Pfam:PF00054 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 GO:GO:0007427 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0003151 GO:GO:0008078 GO:GO:0008347
GO:GO:0007432 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 GO:GO:0022409 InterPro:IPR026906 Pfam:PF13306
GO:GO:2000274 GO:GO:0035050 Pfam:PF01463 GO:GO:0007502
GeneTree:ENSGT00700000104083 GO:GO:0035385 KO:K06839 GO:GO:0050929
EMBL:X53959 EMBL:AF126540 EMBL:M23543 PIR:A36665 PIR:B36665
RefSeq:NP_001097333.1 RefSeq:NP_001097334.1 RefSeq:NP_476727.1
RefSeq:NP_476728.1 RefSeq:NP_476729.1 UniGene:Dm.4729 PDB:1W8A
PDBsum:1W8A ProteinModelPortal:P24014 SMR:P24014 STRING:P24014
PaxDb:P24014 EnsemblMetazoa:FBtr0330731 EnsemblMetazoa:FBtr0330733
GeneID:36746 KEGG:dme:Dmel_CG8355 CTD:36746 FlyBase:FBgn0003425
InParanoid:P24014 OMA:RHKMFKG OrthoDB:EOG46DJHK PhylomeDB:P24014
EvolutionaryTrace:P24014 GenomeRNAi:36746 NextBio:800151
Bgee:P24014 GermOnline:CG8355 GO:GO:0071666 Uniprot:P24014
Length = 1504
Score = 186 (70.5 bits), Expect = 4.5e-15, Sum P(2) = 4.5e-15
Identities = 90/364 (24%), Positives = 153/364 (42%)
Query: 22 INLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIE 80
+ L N I +E +F SL L + L I F T+ +L +LD+S N + +
Sbjct: 129 LQLTDNQIHTIERNSFQDLVSLERLRLNNNRLKAIPENFVTSSASLLRLDISNNVITTVG 188
Query: 81 PGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKL 140
VF SL L L+ +T + AF L L+ L L+ N L S + + G LG+L
Sbjct: 189 RRVFKGAQSLRSLQLDNNQITCLDEHAFKGLVELEILTLNNNNLTS-LPHN-IFGGLGRL 246
Query: 141 DTLDLRQSGISNLPDNVFANN---TWLRNLNLAENELIDL----DVATTLGQNL--VHLD 191
L L DN FA + +WL + L + GQN+ +H
Sbjct: 247 RAL--------RLSDNPFACDCHLSWLSRFLRSATRLAPYTRCQSPSQLKGQNVADLHDQ 298
Query: 192 SLDLSNCHLKGPL---SEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNC 248
S P+ +E++ + + + S + V L T RL +N
Sbjct: 299 EFKCSGLTEHAPMECGAENSCPHPCRCADGIVDCREKSLTSVPVTLPDDTTELRLE-QNF 357
Query: 249 GLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLK 308
++ LP +F F L+ +D+S+N + LS L+ L L + + ++ + F
Sbjct: 358 -ITELPPKSFSSFRRLRRIDLSNNNISRIAHDALSGLKQLTTLVLYGNKIKDLPSGVFKG 416
Query: 309 MTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRL 368
+ SL+ L+L+ N++ + F++L LS+L L + + L F ++ + L
Sbjct: 417 LGSLQLLLLNANEISCIRKDAFRDLHSLSLLSLYDNNIQSLANGTFD---AMKSIKTVHL 473
Query: 369 SGNP 372
+ NP
Sbjct: 474 AKNP 477
Score = 170 (64.9 bits), Expect = 6.6e-09, Sum P(2) = 6.6e-09
Identities = 106/471 (22%), Positives = 188/471 (39%)
Query: 35 AFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLM 94
+F R L + + +S+I + L L L L GN ++ + GVF L SL+ L+
Sbjct: 365 SFSSFRRLRRIDLSNNNISRIAHDALSGLKQLTTLVLYGNKIKDLPSGVFKGLGSLQLLL 424
Query: 95 LNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTL-DLRQSGISNL 153
LN ++ I AF +L+ L L L N ++S L N G D + ++ ++
Sbjct: 425 LNANEISCIRKDAFRDLHSLSLLSLYDNNIQS-------LAN-GTFDAMKSIKTVHLAKN 476
Query: 154 PDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVH---LDSL--DLSNC---HLKGPLS 205
P N WL + L +N I+ A +H ++SL + C L+ LS
Sbjct: 477 PFICDCNLRWLADY-LHKNP-IETSGARCESPKRMHRRRIESLREEKFKCSWDELRMKLS 534
Query: 206 EDAFVNATKLRTLYLSGNPLSAADLSVALKPLT-KLH--RLSLRNCGLSRLPAN-TFHRF 261
+ +++ + G + + P LH L L + L R+ ++ F R
Sbjct: 535 GECRMDSDCPAMCHCEGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRL 594
Query: 262 TCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNK 321
L +L++ N L ++ L +G + ++ IS FL + LKTL L N+
Sbjct: 595 PHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQ 654
Query: 322 LETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHV-LPDST 380
+ + G F++L L+ L L + N H + L + L+G P
Sbjct: 655 ISCVMPGSFEHLNSLTSLNLAS---NPFNCNC-HLAWFAEWLRKKSLNGGAARCGAPSKV 710
Query: 381 KQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTYPDLE----ELRLSGNPLHVLPTGN 436
+ ++ +P +K +E + Y P +R S N L +P G
Sbjct: 711 RDVQIKDLPHSEFKCSSEN------SEGCLGDGYCPPSCTCTGTVVRCSRNQLKEIPRGI 764
Query: 437 XXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSF 487
+I+ + + R++T L+L+NN +++ S +F
Sbjct: 765 PAETSELYLESN-----EIEQIHYERIRHLRSLTRLDLSNNQITILSNYTF 810
Score = 159 (61.0 bits), Expect = 6.1e-20, Sum P(3) = 6.1e-20
Identities = 60/180 (33%), Positives = 87/180 (48%)
Query: 66 LNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLK 125
+ +L+L GN L +I F LT L L L + I ++F +L L+ L L+ N+LK
Sbjct: 102 VERLELQGNNLTVIYETDFQRLTKLRMLQLTDNQIHTIERNSFQDLVSLERLRLNNNRLK 161
Query: 126 SHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQ 185
+ I V + L LD+ + I+ + VF LR+L L N++ LD G
Sbjct: 162 A-IPENFVTSSASLL-RLDISNNVITTVGRRVFKGAQSLRSLQLDNNQITCLDEHAFKG- 218
Query: 186 NLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAAD-----LSVALKPLTKL 240
LV L+ L L+N +L L + F +LR L LS NP A D LS L+ T+L
Sbjct: 219 -LVELEILTLNNNNLTS-LPHNIFGGLGRLRALRLSDNPF-ACDCHLSWLSRFLRSATRL 275
Score = 158 (60.7 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 80/335 (23%), Positives = 137/335 (40%)
Query: 45 LYMQECTLSKINPQ-FFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYI 103
L + + L +I+ F L L KL+L N L IEP F+ + ++ L L + I
Sbjct: 575 LLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEI 634
Query: 104 SPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGIS-NLPDNVFANNT 162
S F L+ LKTL L N++ + + +L L +L+L + + N FA
Sbjct: 635 SNKMFLGLHQLKTLNLYDNQISCVMPGSFE--HLNSLTSLNLASNPFNCNCHLAWFAE-- 690
Query: 163 WLRNLNL--------AENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATK 214
WLR +L A +++ D+ + L + S + C G T
Sbjct: 691 WLRKKSLNGGAARCGAPSKVRDVQIKD-LPHSEFKCSSENSEGCLGDGYCPPSCTCTGTV 749
Query: 215 LRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPL 274
+R S N L + P + L L + + ++ L LD+S+N +
Sbjct: 750 VRC---SRNQLKEIPRGI---P-AETSELYLESNEIEQIHYERIRHLRSLTRLDLSNNQI 802
Query: 275 IDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLT 334
+ L L L + Y+ LQ + R + +L+ L L GN++ L G F++L
Sbjct: 803 TILSNYTFANLTKLSTLIISYNKLQCLQRHALSGLNNLRVLSLHGNRISMLPEGSFEDLK 862
Query: 335 HLSVLELNN------CGLTRLNETVFHENYTYPDL 363
L+ + L + CGL ++ + +Y P +
Sbjct: 863 SLTHIALGSNPLYCDCGLKWFSDWI-KLDYVEPGI 896
Score = 155 (59.6 bits), Expect = 9.9e-09, Sum P(3) = 9.9e-09
Identities = 52/176 (29%), Positives = 80/176 (45%)
Query: 197 NCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPAN 256
+C +G S ++A R L L GN L+ + LTKL L L + + + N
Sbjct: 85 DCSHRGLTSVPRKISADVER-LELQGNNLTVI-YETDFQRLTKLRMLQLTDNQIHTIERN 142
Query: 257 TFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLI 316
+F L+ L +++N L ++ SL LD+ + + + R F SL++L
Sbjct: 143 SFQDLVSLERLRLNNNRLKAIPENFVTSSASLLRLDISNNVITTVGRRVFKGAQSLRSLQ 202
Query: 317 LSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNP 372
L N++ L+ F+ L L +L LNN LT L +F L LRLS NP
Sbjct: 203 LDNNQITCLDEHAFKGLVELEILTLNNNNLTSLPHNIFGG---LGRLRALRLSDNP 255
Score = 133 (51.9 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 87/326 (26%), Positives = 139/326 (42%)
Query: 69 LDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSA-FDNLNHLKTLELSQNKLKSH 127
+D +G L+ I + PL + E L+LN L IS F L HL LEL +N+L
Sbjct: 554 VDCTGRGLKEIPRDI--PLHTTE-LLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTG- 609
Query: 128 IDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNL 187
I+ G + L L ++ I + + +F L+ LNL +N++ + + ++L
Sbjct: 610 IEPNAFEG-ASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSF--EHL 666
Query: 188 VHLDSLDLS------NCHLK--GPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTK 239
L SL+L+ NCHL +N R G P D+ + P ++
Sbjct: 667 NSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARC----GAPSKVRDVQIKDLPHSE 722
Query: 240 LHRLSLRN---C-GLSRLPANTFHRFTCLQEL-DISHNPLIDAFTALLSPLESLEHLDMG 294
+ S N C G P + TC + S N L + + P E+ E L +
Sbjct: 723 F-KCSSENSEGCLGDGYCPPSC----TCTGTVVRCSRNQLKEIPRGI--PAETSE-LYLE 774
Query: 295 YSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVF 354
+ +++I + SL L LS N++ L + F NLT LS L ++ L L
Sbjct: 775 SNEIEQIHYERIRHLRSLTRLDLSNNQITILSNYTFANLTKLSTLIISYNKLQCLQR--- 831
Query: 355 HENYTYPDLEELRLSGNPLHVLPDST 380
H +L L L GN + +LP+ +
Sbjct: 832 HALSGLNNLRVLSLHGNRISMLPEGS 857
Score = 124 (48.7 bits), Expect = 3.5e-16, Sum P(3) = 3.5e-16
Identities = 34/119 (28%), Positives = 53/119 (44%)
Query: 15 DNPGLITINLNANPIQPVEGAFLVAR-SLLYLYMQECTLSKINPQFFTNLTTLNKLDLSG 73
D L + LN N ++ + F+ + SLL L + ++ + + F +L L L
Sbjct: 146 DLVSLERLRLNNNRLKAIPENFVTSSASLLRLDISNNVITTVGRRVFKGAQSLRSLQLDN 205
Query: 74 NPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKS--HIDW 130
N + ++ F L LE L LN NLT + + F L L+ L LS N H+ W
Sbjct: 206 NQITCLDEHAFKGLVELEILTLNNNNLTSLPHNIFGGLGRLRALRLSDNPFACDCHLSW 264
Score = 123 (48.4 bits), Expect = 6.1e-20, Sum P(3) = 6.1e-20
Identities = 37/131 (28%), Positives = 65/131 (49%)
Query: 266 ELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETL 325
EL + N + + S L +D+ +N+ RI+ + L TL+L GNK++ L
Sbjct: 350 ELRLEQNFITELPPKSFSSFRRLRRIDLSNNNISRIAHDALSGLKQLTTLVLYGNKIKDL 409
Query: 326 ESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQYSM 385
SG+F+ L L +L LN ++ + + F + ++ L L L N + L + T +M
Sbjct: 410 PSGVFKGLGSLQLLLLNANEISCIRKDAFRDLHS---LSLLSLYDNNIQSLANGTFD-AM 465
Query: 386 RTIPT-QIWKN 395
++I T + KN
Sbjct: 466 KSIKTVHLAKN 476
Score = 123 (48.4 bits), Expect = 7.1e-15, Sum P(2) = 7.1e-15
Identities = 34/109 (31%), Positives = 52/109 (47%)
Query: 266 ELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETL 325
EL + N + + L SL LD+ + + +S TF +T L TLI+S NKL+ L
Sbjct: 770 ELYLESNEIEQIHYERIRHLRSLTRLDLSNNQITILSNYTFANLTKLSTLIISYNKLQCL 829
Query: 326 ESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLH 374
+ L +L VL L+ ++ L E F + L + L NPL+
Sbjct: 830 QRHALSGLNNLRVLSLHGNRISMLPEGSFED---LKSLTHIALGSNPLY 875
Score = 112 (44.5 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 78/321 (24%), Positives = 126/321 (39%)
Query: 45 LYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYIS 104
L +Q L+ I F LT L L L+ N + IE F L SLE L LN L I
Sbjct: 105 LELQGNNLTVIYETDFQRLTKLRMLQLTDNQIHTIERNSFQDLVSLERLRLNNNRLKAIP 164
Query: 105 PSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWL 164
+ + L L++S N + + + + G L +L L + I+ L ++ F L
Sbjct: 165 ENFVTSSASLLRLDISNNVITT-VGRRVFKG-AQSLRSLQLDNNQITCLDEHAFKGLVEL 222
Query: 165 RNLNLAENELIDL--DVATTLGQ-NLVHL-DSLDLSNCHLKGPLSEDAFV-NATKLRTLY 219
L L N L L ++ LG+ + L D+ +CHL LS F+ +AT+L
Sbjct: 223 EILTLNNNNLTSLPHNIFGGLGRLRALRLSDNPFACDCHLSW-LSR--FLRSATRLAPYT 279
Query: 220 LSGNPLSAADLSVALKPLTKLHRLSLRNCGLSR-LPANTFHRFTCLQELDISHNPLIDAF 278
+P +VA LH + GL+ P +C + ++D
Sbjct: 280 RCQSPSQLKGQNVA-----DLHDQEFKCSGLTEHAPMECGAENSCPHPCRCADG-IVDCR 333
Query: 279 TALLS--PL---ESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNL 333
L+ P+ + L + + + + +F L+ + LS N + + L
Sbjct: 334 EKSLTSVPVTLPDDTTELRLEQNFITELPPKSFSSFRRLRRIDLSNNNISRIAHDALSGL 393
Query: 334 THLSVLELNNCGLTRLNETVF 354
L+ L L + L VF
Sbjct: 394 KQLTTLVLYGNKIKDLPSGVF 414
Score = 97 (39.2 bits), Expect = 6.1e-20, Sum P(3) = 6.1e-20
Identities = 25/105 (23%), Positives = 43/105 (40%)
Query: 458 LPPNVFNNTRNITSLNLANNNLSMTSELSFQFXXXXXXXXXXXXXXXXXTHISPTVLRHN 517
+ PN F +I L L N + E+S + + + P H
Sbjct: 610 IEPNAFEGASHIQELQLGENKIK---EISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHL 666
Query: 518 RAITSIKLVGNPWKCDCNIADMWEWATREKGDIGVLVGSTTPTEI 562
++TS+ L NP+ C+C++A EW R+K G P+++
Sbjct: 667 NSLTSLNLASNPFNCNCHLAWFAEWL-RKKSLNGGAARCGAPSKV 710
Score = 60 (26.2 bits), Expect = 3.8e-09, Sum P(3) = 3.8e-09
Identities = 11/26 (42%), Positives = 18/26 (69%)
Query: 455 IDYLPPNVFNNTRNITSLNLANNNLS 480
I LPP F++ R + ++L+NNN+S
Sbjct: 358 ITELPPKSFSSFRRLRRIDLSNNNIS 383
Score = 57 (25.1 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 19/83 (22%), Positives = 34/83 (40%)
Query: 454 KIDYLPPNVFNNTRNITSLNLANNNLSMTSELSFQFXXXXXXXXXXXXXXXXXTHISPTV 513
KI LP VF ++ L L N +S + +F+ + +
Sbjct: 405 KIKDLPSGVFKGLGSLQLLLLNANEISCIRKDAFRDLHSLSLLSLYDNNIQSLANGTFDA 464
Query: 514 LRHNRAITSIKLVGNPWKCDCNI 536
++ +I ++ L NP+ CDCN+
Sbjct: 465 MK---SIKTVHLAKNPFICDCNL 484
Score = 56 (24.8 bits), Expect = 9.2e-17, Sum P(4) = 9.2e-17
Identities = 20/83 (24%), Positives = 32/83 (38%)
Query: 407 ETVFHENYTY-PDLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNN 465
E + +E + L L LS N + +L N K+ L + +
Sbjct: 779 EQIHYERIRHLRSLTRLDLSNNQITIL--SNYTFANLTKLSTLIISYNKLQCLQRHALSG 836
Query: 466 TRNITSLNLANNNLSMTSELSFQ 488
N+ L+L N +SM E SF+
Sbjct: 837 LNNLRVLSLHGNRISMLPEGSFE 859
Score = 54 (24.1 bits), Expect = 9.2e-17, Sum P(4) = 9.2e-17
Identities = 10/35 (28%), Positives = 18/35 (51%)
Query: 518 RAITSIKLVGNPWKCDCNIADMWEWATREKGDIGV 552
+++T I L NP CDC + +W + + G+
Sbjct: 862 KSLTHIALGSNPLYCDCGLKWFSDWIKLDYVEPGI 896
Score = 40 (19.1 bits), Expect = 3.7e-15, Sum P(4) = 3.7e-15
Identities = 10/35 (28%), Positives = 17/35 (48%)
Query: 454 KIDYLPPNVFNNTRNITSLNLANNNLSMTSELSFQ 488
KI + +F + +LNL +N +S SF+
Sbjct: 630 KIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFE 664
>ZFIN|ZDB-GENE-091214-3 [details] [associations]
symbol:lingo4b "leucine rich repeat and Ig domain
containing 4b" species:7955 "Danio rerio" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 ZFIN:ZDB-GENE-091214-3 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR003591 SMART:SM00369 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 InterPro:IPR025875
Pfam:PF12799 HOVERGEN:HBG057546 EMBL:BC171652 IPI:IPI00612243
UniGene:Dr.74856 ProteinModelPortal:B7ZVN7 eggNOG:NOG299566
OMA:IVESEYA OrthoDB:EOG4NZTT6 Uniprot:B7ZVN7
Length = 604
Score = 267 (99.0 bits), Expect = 8.1e-20, P = 8.1e-20
Identities = 85/284 (29%), Positives = 136/284 (47%)
Query: 60 FTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLEL 119
F++L+ L LDLS N + +IE F L +L YL + L + F L++L+ L++
Sbjct: 78 FSSLSKLEDLDLSENIISMIEVETFQGLKNLRYLRIKNNRLKILPVGVFSGLSNLRRLDI 137
Query: 120 SQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDV 179
S+N++ +D+T ++ L LD ++ + + F L+ LN+ + L +
Sbjct: 138 SENEILVFLDYTF--RDMINLQQLDAGENDLVFISQRAFVGLQALKELNVDRSNLTSIPT 195
Query: 180 ATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLY-LSGNPLSAADLSVALKPLT 238
L Q L L L L + L +AF +LRTL L + L + S +L L
Sbjct: 196 EA-LSQ-LQSLTKLRLRKLTIS-VLPNNAFRRLHQLRTLQILHWSSLEMLN-SNSLVGLN 251
Query: 239 KLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNL 298
L L L NC LS +P + LQ LD+S+NP+ LL L L+ L + NL
Sbjct: 252 -LTTLVLTNCNLSAIPYSPLRHLAYLQYLDLSYNPITSIQGNLLGDLLRLQELHLVGGNL 310
Query: 299 QRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELN 342
+I F ++ + L +S N+L TLE F ++ +L L L+
Sbjct: 311 LQIEPGAFRGLSRFRLLNVSSNRLSTLEESAFHSVGNLQTLRLD 354
Score = 226 (84.6 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 88/313 (28%), Positives = 146/313 (46%)
Query: 64 TTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNK 123
T +LDLSGN L+ + F L+ LE L L+ ++ I F L +L+ L + N+
Sbjct: 58 TNAKRLDLSGNQLKTLARRQFSSLSKLEDLDLSENIISMIEVETFQGLKNLRYLRIKNNR 117
Query: 124 LKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTL 183
LK I V L L LD+ ++ I D F + L+ L+ EN+L+ + +
Sbjct: 118 LK--ILPVGVFSGLSNLRRLDISENEILVFLDYTFRDMINLQQLDAGENDLVFISQRAFV 175
Query: 184 G-QNL--VHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKL 240
G Q L +++D +L++ + LS+ + +LR L +S P +A L+ L L
Sbjct: 176 GLQALKELNVDRSNLTSIPTEA-LSQLQSLTKLRLRKLTISVLPNNAFRRLHQLRTLQIL 234
Query: 241 HRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQR 300
H SL + L L ++S P + L L L++LD+ Y+ +
Sbjct: 235 HWSSLEMLNSNSLVGLNLTTLV-LTNCNLSAIPY-----SPLRHLAYLQYLDLSYNPITS 288
Query: 301 ISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTY 360
I + + L+ L L G L +E G F+ L+ +L +++ L+ L E+ FH +
Sbjct: 289 IQGNLLGDLLRLQELHLVGGNLLQIEPGAFRGLSRFRLLNVSSNRLSTLEESAFH---SV 345
Query: 361 PDLEELRLSGNPL 373
+L+ LRL NPL
Sbjct: 346 GNLQTLRLDRNPL 358
Score = 191 (72.3 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 74/255 (29%), Positives = 122/255 (47%)
Query: 22 INLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIE 80
++L+ N I +E F ++L YL ++ L + F+ L+ L +LD+S N + +
Sbjct: 87 LDLSENIISMIEVETFQGLKNLRYLRIKNNRLKILPVGVFSGLSNLRRLDISENEILVFL 146
Query: 81 PGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKL 140
F + +L+ L +L +IS AF L LK L + ++ L S I T L L L
Sbjct: 147 DYTFRDMINLQQLDAGENDLVFISQRAFVGLQALKELNVDRSNLTS-IP-TEALSQLQSL 204
Query: 141 DTLDLRQSGISNLPDNVFANNTWLRNLNLAE-NELIDLDVATTLGQNLVHLDSLDLSNCH 199
L LR+ IS LP+N F LR L + + L L+ + +G NL +L L+NC+
Sbjct: 205 TKLRLRKLTISVLPNNAFRRLHQLRTLQILHWSSLEMLNSNSLVGLNLT---TLVLTNCN 261
Query: 200 LKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFH 259
L + + L+ L LS NP+++ ++ L L +L L L L ++ F
Sbjct: 262 LSA-IPYSPLRHLAYLQYLDLSYNPITSIQGNL-LGDLLRLQELHLVGGNLLQIEPGAFR 319
Query: 260 RFTCLQELDISHNPL 274
+ + L++S N L
Sbjct: 320 GLSRFRLLNVSSNRL 334
Score = 167 (63.8 bits), Expect = 7.3e-09, P = 7.3e-09
Identities = 75/295 (25%), Positives = 124/295 (42%)
Query: 193 LDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSR 252
LDLS LK L+ F + +KL L LS N +S ++ + L L L ++N L
Sbjct: 63 LDLSGNQLK-TLARRQFSSLSKLEDLDLSENIISMIEVET-FQGLKNLRYLRIKNNRLKI 120
Query: 253 LPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSL 312
LP F + L+ LDIS N ++ + +L+ LD G ++L IS+ F+ + +L
Sbjct: 121 LPVGVFSGLSNLRRLDISENEILVFLDYTFRDMINLQQLDAGENDLVFISQRAFVGLQAL 180
Query: 313 KTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNP 372
K L + + L ++ + L L+ L L ++ L F + L+ L S
Sbjct: 181 KELNVDRSNLTSIPTEALSQLQSLTKLRLRKLTISVLPNNAFRRLHQLRTLQILHWSS-- 238
Query: 373 LHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTYPDLEELRLSGNPLHVL 432
L +L +S + + T + N + I + + H Y L+ L LS NP+ +
Sbjct: 239 LEML-NSNSLVGLN-LTTLVLTNCNLSAIPY---SPLRHLAY----LQYLDLSYNPITSI 289
Query: 433 PTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSF 487
GN + + P F LN+++N LS E +F
Sbjct: 290 Q-GNLLGDLLRLQELHLVGGNLLQ-IEPGAFRGLSRFRLLNVSSNRLSTLEESAF 342
Score = 130 (50.8 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 54/193 (27%), Positives = 94/193 (48%)
Query: 35 AFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYL- 93
AF+ ++L L + L+ I + + L +L KL L + ++ F L L L
Sbjct: 173 AFVGLQALKELNVDRSNLTSIPTEALSQLQSLTKLRLRKLTISVLPNNAFRRLHQLRTLQ 232
Query: 94 MLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNL 153
+L+ +L ++ ++ LN L TL L+ L S I ++ L +L L LDL + I+++
Sbjct: 233 ILHWSSLEMLNSNSLVGLN-LTTLVLTNCNL-SAIPYS-PLRHLAYLQYLDLSYNPITSI 289
Query: 154 PDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNAT 213
N+ + L+ L+L L+ ++ G + L L++S+ L L E AF +
Sbjct: 290 QGNLLGDLLRLQELHLVGGNLLQIEPGAFRGLSRFRL--LNVSSNRLS-TLEESAFHSVG 346
Query: 214 KLRTLYLSGNPLS 226
L+TL L NPL+
Sbjct: 347 NLQTLRLDRNPLA 359
Score = 124 (48.7 bits), Expect = 0.00034, P = 0.00034
Identities = 39/128 (30%), Positives = 64/128 (50%)
Query: 24 LNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGV 83
L+ + ++ + LV +L L + C LS I +L L LDLS NP+ I+ +
Sbjct: 234 LHWSSLEMLNSNSLVGLNLTTLVLTNCNLSAIPYSPLRHLAYLQYLDLSYNPITSIQGNL 293
Query: 84 FDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTL 143
L L+ L L NL I P AF L+ + L +S N+L S ++ + ++G L TL
Sbjct: 294 LGDLLRLQELHLVGGNLLQIEPGAFRGLSRFRLLNVSSNRL-STLEES-AFHSVGNLQTL 351
Query: 144 DLRQSGIS 151
L ++ ++
Sbjct: 352 RLDRNPLA 359
Score = 121 (47.7 bits), Expect = 0.00073, P = 0.00073
Identities = 70/261 (26%), Positives = 106/261 (40%)
Query: 225 LSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSP 284
LSAADL + L + NC L A T + LD+S N L S
Sbjct: 22 LSAADLPCPQRCSCSRDPLEV-NCSSRHLTAVPEGLPTNAKRLDLSGNQLKTLARRQFSS 80
Query: 285 LESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNC 344
L LE LD+ + + I TF + +L+ L + N+L+ L G+F L++L L+++
Sbjct: 81 LSKLEDLDLSENIISMIEVETFQGLKNLRYLRIKNNRLKILPVGVFSGLSNLRRLDISE- 139
Query: 345 GLTRLNETVFHENYTYPD---LEELRLSGNPLHVLPDSTKQYSMRTIPTQIWK--NFDFL 399
NE + +YT+ D L++L N L + S + + + Q K N D
Sbjct: 140 -----NEILVFLDYTFRDMINLQQLDAGENDLVFI--SQRAF----VGLQALKELNVDRS 188
Query: 400 VILFILNETVFHENYTYPDLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLP 459
+ I E + L +LRL + VLP N ++ L
Sbjct: 189 NLTSIPTEALSQ----LQSLTKLRLRKLTISVLPN-NAFRRLHQLRTLQILHWSSLEMLN 243
Query: 460 PNVFNNTRNITSLNLANNNLS 480
N N+T+L L N NLS
Sbjct: 244 SNSLVGL-NLTTLVLTNCNLS 263
>MGI|MGI:107935 [details] [associations]
symbol:Lrig1 "leucine-rich repeats and immunoglobulin-like
domains 1" species:10090 "Mus musculus" [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:107935 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GeneTree:ENSGT00690000101816 Pfam:PF01463 CTD:26018
HOGENOM:HOG000113380 HOVERGEN:HBG052353 OMA:ESNGVCP
OrthoDB:EOG48PMJN ChiTaRS:LRIG1 EMBL:D78572 EMBL:AC122272
EMBL:AC155330 IPI:IPI00136475 PIR:A58532 RefSeq:NP_032403.2
UniGene:Mm.245210 ProteinModelPortal:P70193 SMR:P70193
STRING:P70193 PhosphoSite:P70193 PaxDb:P70193 PRIDE:P70193
Ensembl:ENSMUST00000032105 Ensembl:ENSMUST00000101126 GeneID:16206
KEGG:mmu:16206 UCSC:uc009czu.1 InParanoid:P70193 NextBio:289161
Bgee:P70193 Genevestigator:P70193 GermOnline:ENSMUSG00000030029
Uniprot:P70193
Length = 1091
Score = 271 (100.5 bits), Expect = 9.0e-20, P = 9.0e-20
Identities = 89/331 (26%), Positives = 166/331 (50%)
Query: 18 GLITINLNANPIQPVEGAFLVAR-SLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPL 76
G++++ L N I V+G+ L + SL L + +++I F N + +L+L+ N +
Sbjct: 118 GVVSLFLQHNKILSVDGSQLKSYLSLEVLDLSSNNITEIRSSCFPNGLRIRELNLASNRI 177
Query: 77 RIIEPGVFDPLT-SLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLG 135
I+E G FD L+ SL L L++ +T + AF L L L+L++N+++ I+ L
Sbjct: 178 SILESGAFDGLSRSLLTLRLSKNRITQLPVKAF-KLPRLTQLDLNRNRIRL-IEG-LTFQ 234
Query: 136 NLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDL 195
L L+ L L+++ IS L D F + + L+L N L++++ + G +H L L
Sbjct: 235 GLDSLEVLRLQRNNISRLTDGAFWGLSKMHVLHLEYNSLVEVNSGSLYGLTALH--QLHL 292
Query: 196 SNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPA 255
SN + + D + KL L LS N L+ D +L L+ L L L + +S +
Sbjct: 293 SNNSISR-IQRDGWSFCQKLHELILSFNNLTRLD-EESLAELSSLSILRLSHNAISHIAE 350
Query: 256 NTFHRFTCLQELDISHNPL---IDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSL 312
F L+ LD+ HN + I+ + + L++L L + + ++ +++ F + SL
Sbjct: 351 GAFKGLKSLRVLDLDHNEISGTIEDTSGAFTGLDNLSKLTLFGNKIKSVAKRAFSGLESL 410
Query: 313 KTLILSGNKLETLESGLFQNLTHLSVLELNN 343
+ L L N + +++ F + +L L +++
Sbjct: 411 EHLNLGENAIRSVQFDAFAKMKNLKELYISS 441
Score = 204 (76.9 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 86/359 (23%), Positives = 146/359 (40%)
Query: 15 DNPGLITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGN 74
D L + LN+N + + + ++ L++Q + ++ + +L LDLS N
Sbjct: 92 DLTNLQEVYLNSNELTAIPSLGAASIGVVSLFLQHNKILSVDGSQLKSYLSLEVLDLSSN 151
Query: 75 PLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNH-LKTLELSQNKLKSHIDWTLV 133
+ I F + L L ++ + AFD L+ L TL LS+N++ +
Sbjct: 152 NITEIRSSCFPNGLRIRELNLASNRISILESGAFDGLSRSLLTLRLSKNRITQ---LPVK 208
Query: 134 LGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSL 193
L +L LDL ++ I + F L L L N + L G + +H+ L
Sbjct: 209 AFKLPRLTQLDLNRNRIRLIEGLTFQGLDSLEVLRLQRNNISRLTDGAFWGLSKMHVLHL 268
Query: 194 DLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRL 253
+ ++ ++ + T L L+LS N +S KLH L L L+RL
Sbjct: 269 EYNSLV---EVNSGSLYGLTALHQLHLSNNSISRIQRD-GWSFCQKLHELILSFNNLTRL 324
Query: 254 PANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRST---FLKMT 310
+ + L L +SHN + L+SL LD+ ++ + T F +
Sbjct: 325 DEESLAELSSLSILRLSHNAISHIAEGAFKGLKSLRVLDLDHNEISGTIEDTSGAFTGLD 384
Query: 311 SLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLS 369
+L L L GNK++++ F L L L N G + F +L+EL +S
Sbjct: 385 NLSKLTLFGNKIKSVAKRAFSGLESLEHL---NLGENAIRSVQFDAFAKMKNLKELYIS 440
Score = 196 (74.1 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 84/324 (25%), Positives = 142/324 (43%)
Query: 52 LSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNL 111
LS+I+ F +LT L ++ L+ N L I P + + L L + + S +
Sbjct: 82 LSEIDSAAFEDLTNLQEVYLNSNELTAI-PSLGAASIGVVSLFLQHNKILSVDGSQLKSY 140
Query: 112 NHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFAN-NTWLRNLNLA 170
L+ L+LS N + + I + L ++ L+L + IS L F + L L L+
Sbjct: 141 LSLEVLDLSSNNI-TEIRSSCFPNGL-RIRELNLASNRISILESGAFDGLSRSLLTLRLS 198
Query: 171 ENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSED-AFVNATKLRTLYLSGNPLSAAD 229
+N + L V L L LDL+ ++ L E F L L L N +S
Sbjct: 199 KNRITQLPVKAF---KLPRLTQLDLNRNRIR--LIEGLTFQGLDSLEVLRLQRNNISRLT 253
Query: 230 LSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLE 289
A L+K+H L L L + + + + T L +L +S+N + S + L
Sbjct: 254 -DGAFWGLSKMHVLHLEYNSLVEVNSGSLYGLTALHQLHLSNNSISRIQRDGWSFCQKLH 312
Query: 290 HLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRL 349
L + ++NL R+ + +++SL L LS N + + G F+ L L VL+L++ ++
Sbjct: 313 ELILSFNNLTRLDEESLAELSSLSILRLSHNAISHIAEGAFKGLKSLRVLDLDHNEISGT 372
Query: 350 NETVFHENYTYPDLEELRLSGNPL 373
E +L +L L GN +
Sbjct: 373 IEDTSGAFTGLDNLSKLTLFGNKI 396
Score = 160 (61.4 bits), Expect = 9.5e-08, P = 9.5e-08
Identities = 84/327 (25%), Positives = 151/327 (46%)
Query: 67 NKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKS 126
+ LD SG L + + SL L NR L+ I +AF++L +L+ + L+ N+L +
Sbjct: 52 DSLDCSGRGLATLPRDLPSWTRSLN-LSYNR--LSEIDSAAFEDLTNLQEVYLNSNELTA 108
Query: 127 HIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQN 186
I +L ++G + +L L+ + I ++ + + L L+L+ N + + + ++ N
Sbjct: 109 -IP-SLGAASIGVV-SLFLQHNKILSVDGSQLKSYLSLEVLDLSSNNITE--IRSSCFPN 163
Query: 187 LVHLDSLDLSNCHLKGPLSEDAFVNATK-LRTLYLSGNPLSAADLSVALKPLTKLHRLSL 245
+ + L+L++ + L AF ++ L TL LS N ++ L V L +L +L L
Sbjct: 164 GLRIRELNLASNRIS-ILESGAFDGLSRSLLTLRLSKNRIT--QLPVKAFKLPRLTQLDL 220
Query: 246 RNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRST 305
+ + TF L+ L + N + L + L + Y++L ++ +
Sbjct: 221 NRNRIRLIEGLTFQGLDSLEVLRLQRNNISRLTDGAFWGLSKMHVLHLEYNSLVEVNSGS 280
Query: 306 FLKMTSLKTLILSGNKLETLE-SGL-FQNLTHLSVLELNNCGLTRLNETVFHENYTYPDL 363
+T+L L LS N + ++ G F H +L NN LTRL+E E L
Sbjct: 281 LYGLTALHQLHLSNNSISRIQRDGWSFCQKLHELILSFNN--LTRLDEESLAE---LSSL 335
Query: 364 EELRLSGNPL-HVLPDSTKQY-SMRTI 388
LRLS N + H+ + K S+R +
Sbjct: 336 SILRLSHNAISHIAEGAFKGLKSLRVL 362
Score = 142 (55.0 bits), Expect = 8.3e-06, P = 8.3e-06
Identities = 60/213 (28%), Positives = 98/213 (46%)
Query: 12 RNLDNPGLITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDL 71
+ LD+ ++ + N N + +GAF + L+++ +L ++N LT L++L L
Sbjct: 234 QGLDSLEVLRLQRN-NISRLTDGAFWGLSKMHVLHLEYNSLVEVNSGSLYGLTALHQLHL 292
Query: 72 SGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWT 131
S N + I+ + L L+L+ NLT + + L+ L L LS N + SHI
Sbjct: 293 SNNSISRIQRDGWSFCQKLHELILSFNNLTRLDEESLAELSSLSILRLSHNAI-SHIAEG 351
Query: 132 LVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLN---LAENELIDLDVATTLGQNLV 188
G L L LDL + IS ++ T L NL+ L N++ VA L
Sbjct: 352 AFKG-LKSLRVLDLDHNEISGTIEDTSGAFTGLDNLSKLTLFGNKI--KSVAKRAFSGLE 408
Query: 189 HLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLS 221
L+ L+L ++ + DAF L+ LY+S
Sbjct: 409 SLEHLNLGENAIRS-VQFDAFAKMKNLKELYIS 440
>UNIPROTKB|F1MT22 [details] [associations]
symbol:LGR5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048839 "inner ear development" evidence=IEA]
[GO:0016500 "protein-hormone receptor activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0048839 GO:GO:0016500 GeneTree:ENSGT00650000092962
OMA:FNPHFKE EMBL:DAAA02012288 EMBL:DAAA02012284 EMBL:DAAA02012285
EMBL:DAAA02012286 EMBL:DAAA02012287 IPI:IPI00688410
UniGene:Bt.94743 ProteinModelPortal:F1MT22
Ensembl:ENSBTAT00000017631 NextBio:20873048 Uniprot:F1MT22
Length = 907
Score = 269 (99.8 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 108/378 (28%), Positives = 169/378 (44%)
Query: 22 INLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIE 80
+ L N + + +GAF SL L +Q L ++ + NL +L L L N + +
Sbjct: 95 LRLAGNALTYIPKGAFAGLYSLKVLMLQNNHLRQVPTEALQNLRSLQSLRLDANRISSVP 154
Query: 81 PGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKL 140
P F L SL +L L+ LT I AF +L+ L+ + L+ NK+ HI GNL L
Sbjct: 155 PSCFSGLHSLRHLWLDDNALTEIPVQAFRSLSALQAMTLALNKIH-HIP-DYAFGNLSSL 212
Query: 141 DTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHL 200
L L + I +L F L L+L N +LD T + L +L L + ++
Sbjct: 213 VVLHLHNNRIHSLGKKCFDGLHSLETLDLNYN---NLDEFPTAVRTLSNLKELGFHSNNI 269
Query: 201 KGPLSEDAFVNATKLRTLYLSGNPLSAADLSV-----ALKPLT----------------- 238
K + E AFV L T++ NP+ S L+ LT
Sbjct: 270 KS-IPEKAFVGNPSLITIHFYDNPIQLVGRSAFQHLPELRTLTLNGASQITEFPDLTGTA 328
Query: 239 KLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNL 298
L L+L +S LP + LQ LD+S+N L D + S + L+ +D+ ++ +
Sbjct: 329 SLESLTLTGAQISSLPQTVCDQLPNLQVLDLSYNLLEDLPS--FSVCQKLQKIDLRHNEI 386
Query: 299 QRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENY 358
I TF ++ SL++L L+ NK+ ++ F L L L+L++ L+ + T H
Sbjct: 387 YEIQADTFQQLFSLRSLNLAWNKIAIIDPNAFSTLPSLRKLDLSSNRLSSIPVTGLH--- 443
Query: 359 TYPDLEELRLSGNPLHVL 376
L L+L+GN H L
Sbjct: 444 ---GLTHLKLTGN--HAL 456
Score = 216 (81.1 bits), Expect = 6.5e-14, P = 6.5e-14
Identities = 119/413 (28%), Positives = 173/413 (41%)
Query: 40 RSLLYLYMQECTLSKINPQFFTNLTTLNK-LDLSGNPLRIIEPGVFDPLTSLEYLMLNRC 98
R LL + + LS++ P +NL+ LDLS N + + P L LE L L
Sbjct: 45 RMLLRVDCSDLGLSEL-P---SNLSVFTSYLDLSMNNISQLPPSPLHSLRFLEELRLAGN 100
Query: 99 NLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVF 158
LTYI AF L LK L L N L+ + T L NL L +L L + IS++P + F
Sbjct: 101 ALTYIPKGAFAGLYSLKVLMLQNNHLRQ-VP-TEALQNLRSLQSLRLDANRISSVPPSCF 158
Query: 159 ANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTL 218
+ LR+L L +N L ++ V + + +L L+ H + + AF N + L L
Sbjct: 159 SGLHSLRHLWLDDNALTEIPVQAFRSLSALQAMTLALNKIH---HIPDYAFGNLSSLVVL 215
Query: 219 YLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAF 278
+L N + + L L L L L P + L+EL N +
Sbjct: 216 HLHNNRIHSLGKK-CFDGLHSLETLDLNYNNLDEFPT-AVRTLSNLKELGFHSNNIKSIP 273
Query: 279 TALLSPLESLEHLDMGYSN-LQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLS 337
SL + Y N +Q + RS F + L+TL L+G T E L
Sbjct: 274 EKAFVGNPSLITIHF-YDNPIQLVGRSAFQHLPELRTLTLNGASQIT-EFPDLTGTASLE 331
Query: 338 VLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIP---TQIWK 394
L L ++ L +TV + P+L+ L LS N L LP + ++ I +I++
Sbjct: 332 SLTLTGAQISSLPQTVCDQ---LPNLQVLDLSYNLLEDLPSFSVCQKLQKIDLRHNEIYE 388
Query: 395 ----NFDFLVILFILNET-----VFHENY--TYPDLEELRLSGNPLHVLP-TG 435
F L L LN + N T P L +L LS N L +P TG
Sbjct: 389 IQADTFQQLFSLRSLNLAWNKIAIIDPNAFSTLPSLRKLDLSSNRLSSIPVTG 441
Score = 168 (64.2 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 89/360 (24%), Positives = 151/360 (41%)
Query: 143 LDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKG 202
LDL + IS LP + + +L L LA N L + G L L L L N HL+
Sbjct: 71 LDLSMNNISQLPPSPLHSLRFLEELRLAGNALTYIPKGAFAG--LYSLKVLMLQNNHLR- 127
Query: 203 PLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFT 262
+ +A N L++L L N +S+ S L L L L + L+ +P F +
Sbjct: 128 QVPTEALQNLRSLQSLRLDANRISSVPPS-CFSGLHSLRHLWLDDNALTEIPVQAFRSLS 186
Query: 263 CLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKL 322
LQ + ++ N + L SL L + + + + + F + SL+TL L+ N L
Sbjct: 187 ALQAMTLALNKIHHIPDYAFGNLSSLVVLHLHNNRIHSLGKKCFDGLHSLETLDLNYNNL 246
Query: 323 ETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQ 382
+ + + + L++L L ++ + + E F N P L + NP+ ++ S Q
Sbjct: 247 DEFPTAV-RTLSNLKELGFHSNNIKSIPEKAFVGN---PSLITIHFYDNPIQLVGRSAFQ 302
Query: 383 Y--SMRTIP----TQIWKNFDF-----LVILFILNETVFHENYTY----PDLEELRLSGN 427
+ +RT+ +QI + D L L + + T P+L+ L LS N
Sbjct: 303 HLPELRTLTLNGASQITEFPDLTGTASLESLTLTGAQISSLPQTVCDQLPNLQVLDLSYN 362
Query: 428 PLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSF 487
L LP+ + +I + + F ++ SLNLA N +++ +F
Sbjct: 363 LLEDLPSFSVCQKLQKIDLRHN----EIYEIQADTFQQLFSLRSLNLAWNKIAIIDPNAF 418
Score = 158 (60.7 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 85/378 (22%), Positives = 153/378 (40%)
Query: 117 LELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELID 176
L+LS N + S + + L +L L+ L L + ++ +P FA L+ L L N L
Sbjct: 71 LDLSMNNI-SQLPPS-PLHSLRFLEELRLAGNALTYIPKGAFAGLYSLKVLMLQNNHL-- 126
Query: 177 LDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKP 236
V T QNL L SL L + + F LR L+L N L+ + A +
Sbjct: 127 RQVPTEALQNLRSLQSLRLDANRISS-VPPSCFSGLHSLRHLWLDDNALTEIPVQ-AFRS 184
Query: 237 LTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYS 296
L+ L ++L + +P F + L L + +N + L SLE LD+ Y+
Sbjct: 185 LSALQAMTLALNKIHHIPDYAFGNLSSLVVLHLHNNRIHSLGKKCFDGLHSLETLDLNYN 244
Query: 297 NLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHE 356
NL + +++LK L N ++++ F L + + + + + F
Sbjct: 245 NLDEFPTAV-RTLSNLKELGFHSNNIKSIPEKAFVGNPSLITIHFYDNPIQLVGRSAFQH 303
Query: 357 NYTYPDLEELRLSG-NPLHVLPDSTKQYSMRTI----------PTQIWKNFDFLVILFIL 405
P+L L L+G + + PD T S+ ++ P + L +L L
Sbjct: 304 ---LPELRTLTLNGASQITEFPDLTGTASLESLTLTGAQISSLPQTVCDQLPNLQVLD-L 359
Query: 406 NETVFHENYTYP---DLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNV 462
+ + + ++ L+++ L N ++ + KI + PN
Sbjct: 360 SYNLLEDLPSFSVCQKLQKIDLRHNEIYEIQADTFQQLFSLRSLNLAWN--KIAIIDPNA 417
Query: 463 FNNTRNITSLNLANNNLS 480
F+ ++ L+L++N LS
Sbjct: 418 FSTLPSLRKLDLSSNRLS 435
Score = 145 (56.1 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 82/321 (25%), Positives = 132/321 (41%)
Query: 176 DLDVATTLGQNL-VHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVAL 234
DL ++ L NL V LDLS ++ L + L L L+GN L+ A
Sbjct: 54 DLGLSE-LPSNLSVFTSYLDLSMNNIS-QLPPSPLHSLRFLEELRLAGNALTYIPKG-AF 110
Query: 235 KPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMG 294
L L L L+N L ++P LQ L + N + + S L SL HL +
Sbjct: 111 AGLYSLKVLMLQNNHLRQVPTEALQNLRSLQSLRLDANRISSVPPSCFSGLHSLRHLWLD 170
Query: 295 YSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVF 354
+ L I F +++L+ + L+ NK+ + F NL+ L VL L+N + L + F
Sbjct: 171 DNALTEIPVQAFRSLSALQAMTLALNKIHHIPDYAFGNLSSLVVLHLHNNRIHSLGKKCF 230
Query: 355 HENYTYPDLEELRLSGNPLHVLPDSTKQYS-----------MRTIPTQIWK-NFDFLVIL 402
++ LE L L+ N L P + + S +++IP + + N + I
Sbjct: 231 DGLHS---LETLDLNYNNLDEFPTAVRTLSNLKELGFHSNNIKSIPEKAFVGNPSLITIH 287
Query: 403 FILN--ETVFHENYTY-PDLEELRLSG-NPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYL 458
F N + V + + P+L L L+G + + P +I L
Sbjct: 288 FYDNPIQLVGRSAFQHLPELRTLTLNGASQITEFPD----LTGTASLESLTLTGAQISSL 343
Query: 459 PPNVFNNTRNITSLNLANNNL 479
P V + N+ L+L+ N L
Sbjct: 344 PQTVCDQLPNLQVLDLSYNLL 364
Score = 125 (49.1 bits), Expect = 0.00045, P = 0.00045
Identities = 59/222 (26%), Positives = 97/222 (43%)
Query: 19 LITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRI 78
L T++LN N + A +L L + I + F +L + NP+++
Sbjct: 236 LETLDLNYNNLDEFPTAVRTLSNLKELGFHSNNIKSIPEKAFVGNPSLITIHFYDNPIQL 295
Query: 79 IEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLG 138
+ F L L L LN + P + L++L L+ ++ S + T V L
Sbjct: 296 VGRSAFQHLPELRTLTLNGASQITEFPDLTGTAS-LESLTLTGAQISS-LPQT-VCDQLP 352
Query: 139 KLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNC 198
L LDL + + +LP F+ L+ ++L NE+ ++ T Q L L SL+L+
Sbjct: 353 NLQVLDLSYNLLEDLPS--FSVCQKLQKIDLRHNEIYEIQADTF--QQLFSLRSLNLAWN 408
Query: 199 HLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKL 240
+ + +AF LR L LS N LS+ ++ L LT L
Sbjct: 409 KI-AIIDPNAFSTLPSLRKLDLSSNRLSSIPVT-GLHGLTHL 448
>UNIPROTKB|F1NKM7 [details] [associations]
symbol:LGR6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016500 "protein-hormone receptor activity" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002131 InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00373
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 InterPro:IPR003591
SMART:SM00369 GO:GO:0016500 GeneTree:ENSGT00650000092962
OMA:AYGKAPS EMBL:AADN02063998 EMBL:AADN02063999 IPI:IPI00591161
ProteinModelPortal:F1NKM7 Ensembl:ENSGALT00000000792 Uniprot:F1NKM7
Length = 811
Score = 268 (99.4 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 89/325 (27%), Positives = 155/325 (47%)
Query: 15 DNPGLITINLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSG 73
D P L ++ L+AN I V E +F +SL +L++ + L++I + L L + L+
Sbjct: 41 DLPNLQSLRLDANLISVVPEESFEGLQSLRHLWLDDNALTEIPVRALNRLPALQAMTLAL 100
Query: 74 NPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLV 133
N + I F L+SL L L+ + + + FD L++L+TL+L+ N+L +++
Sbjct: 101 NQIWRIPDYAFQNLSSLVVLHLHNNRIQRLGANGFDGLHNLETLDLNYNEL---LEFPGA 157
Query: 134 LGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSL 193
+ LG+L L + I +P+N F N L+ ++ +N + V + Q L L +L
Sbjct: 158 IRTLGRLQELGFHNNNIKAIPENAFVGNPLLQTIHFYDNPI--QFVGQSAFQYLPKLHTL 215
Query: 194 DLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRL 253
L+ + T L L L+ + +V + L L L L + + L
Sbjct: 216 SLNGATDIREFPD--LKGTTSLEVLTLTRAGIRLLPRAVC-QQLPNLRVLELSHNKIEDL 272
Query: 254 PANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLK 313
P+ FHR L+EL + HN + + L +L +D+ ++++ I F+ + SL
Sbjct: 273 PS--FHRCQRLEELGLQHNRIHEIRADTFVQLTALRSIDLSWNDIHFIHPDAFVTLRSLT 330
Query: 314 TLILSGNKLETLESGLFQNLTHLSV 338
L LS N+L L G +LTHL +
Sbjct: 331 KLDLSDNRLAALPLGGLGSLTHLKL 355
Score = 241 (89.9 bits), Expect = 1.0e-16, P = 1.0e-16
Identities = 107/372 (28%), Positives = 164/372 (44%)
Query: 24 LNANPIQPVEG-AFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPG 82
L+ N I + G AF SL L +Q LS+I + +L L L L N + ++
Sbjct: 2 LSGNQISSIPGEAFSGLYSLKILMLQNNQLSRIPAEALRDLPNLQSLRLDANLISVVPEE 61
Query: 83 VFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDT 142
F+ L SL +L L+ LT I A + L L+ + L+ N++ D+ NL L
Sbjct: 62 SFEGLQSLRHLWLDDNALTEIPVRALNRLPALQAMTLALNQIWRIPDYAFQ--NLSSLVV 119
Query: 143 LDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVAT-TLG--QNL-VHLDSLDL--S 196
L L + I L N F L L+L NEL++ A TLG Q L H +++
Sbjct: 120 LHLHNNRIQRLGANGFDGLHNLETLDLNYNELLEFPGAIRTLGRLQELGFHNNNIKAIPE 179
Query: 197 NCHLKGPL--------------SEDAFVNATKLRTLYLSGNPLSAADLSVA--LKPLTKL 240
N + PL + AF KL TL L+G A D+ LK T L
Sbjct: 180 NAFVGNPLLQTIHFYDNPIQFVGQSAFQYLPKLHTLSLNG----ATDIREFPDLKGTTSL 235
Query: 241 HRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQR 300
L+L G+ LP + L+ L++SHN + D + + LE L + ++ +
Sbjct: 236 EVLTLTRAGIRLLPRAVCQQLPNLRVLELSHNKIEDLPS--FHRCQRLEELGLQHNRIHE 293
Query: 301 ISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTY 360
I TF+++T+L+++ LS N + + F L L+ L+L++ L L
Sbjct: 294 IRADTFVQLTALRSIDLSWNDIHFIHPDAFVTLRSLTKLDLSDNRLAALPLGGLGS---- 349
Query: 361 PDLEELRLSGNP 372
L L+L GNP
Sbjct: 350 --LTHLKLQGNP 359
Score = 165 (63.1 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 102/361 (28%), Positives = 152/361 (42%)
Query: 100 LTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFA 159
++ I AF L LK L L N+L S I L +L L +L L + IS +P+ F
Sbjct: 7 ISSIPGEAFSGLYSLKILMLQNNQL-SRIP-AEALRDLPNLQSLRLDANLISVVPEESFE 64
Query: 160 NNTWLRNLNLAENELIDLDV----------ATTLGQNLV---------HLDSLDLSNCHL 200
LR+L L +N L ++ V A TL N + +L SL + + H
Sbjct: 65 GLQSLRHLWLDDNALTEIPVRALNRLPALQAMTLALNQIWRIPDYAFQNLSSLVVLHLHN 124
Query: 201 KG--PLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTF 258
L + F L TL L+ N L + A++ L +L L N + +P N F
Sbjct: 125 NRIQRLGANGFDGLHNLETLDLNYNEL--LEFPGAIRTLGRLQELGFHNNNIKAIPENAF 182
Query: 259 HRFTCLQELDISHNPLIDAFTALLSPLESLEHLDM-GYSNLQRISRSTFLK-MTSLKTLI 316
LQ + NP+ + L L L + G ++++ LK TSL+ L
Sbjct: 183 VGNPLLQTIHFYDNPIQFVGQSAFQYLPKLHTLSLNGATDIREFPD---LKGTTSLEVLT 239
Query: 317 LSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLH-V 375
L+ + L + Q L +L VLEL++ + L FH LEEL L N +H +
Sbjct: 240 LTRAGIRLLPRAVCQQLPNLRVLELSHNKIEDLPS--FHRCQR---LEELGLQHNRIHEI 294
Query: 376 LPDSTKQYS-MRTIPTQIWKNFDFLVILFILNETVFHENYTYPDLEELRLSGNPLHVLPT 434
D+ Q + +R+I W + F+ + F T L +L LS N L LP
Sbjct: 295 RADTFVQLTALRSIDLS-WNDIHFI------HPDAF---VTLRSLTKLDLSDNRLAALPL 344
Query: 435 G 435
G
Sbjct: 345 G 345
Score = 135 (52.6 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 49/162 (30%), Positives = 75/162 (46%)
Query: 220 LSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFT 279
LSGN +S+ A L L L L+N LSR+PA LQ L + N +
Sbjct: 2 LSGNQISSIP-GEAFSGLYSLKILMLQNNQLSRIPAEALRDLPNLQSLRLDANLISVVPE 60
Query: 280 ALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVL 339
L+SL HL + + L I ++ +L+ + L+ N++ + FQNL+ L VL
Sbjct: 61 ESFEGLQSLRHLWLDDNALTEIPVRALNRLPALQAMTLALNQIWRIPDYAFQNLSSLVVL 120
Query: 340 ELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTK 381
L+N + RL F + +LE L L+ N L P + +
Sbjct: 121 HLHNNRIQRLGANGFDGLH---NLETLDLNYNELLEFPGAIR 159
>RGD|2724 [details] [associations]
symbol:Gp5 "glycoprotein V (platelet)" species:10116 "Rattus
norvegicus" [GO:0005518 "collagen binding" evidence=IEA;ISO]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007160 "cell-matrix
adhesion" evidence=IEA;ISO] [GO:0007596 "blood coagulation"
evidence=IEA] [GO:0009986 "cell surface" evidence=IDA] [GO:0010544
"negative regulation of platelet activation" evidence=IEA;ISO]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 RGD:2724 GO:GO:0016021 GO:GO:0009986 GO:GO:0007596
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007160 InterPro:IPR000372 SMART:SM00013
GO:GO:0010544 CTD:2814 HOGENOM:HOG000112798 HOVERGEN:HBG005906
KO:K06260 OrthoDB:EOG4JHCFD EMBL:Z69594 IPI:IPI00195678
RefSeq:NP_036927.1 UniGene:Rn.138111 ProteinModelPortal:O08770
STRING:O08770 PRIDE:O08770 GeneID:25259 KEGG:rno:25259 UCSC:RGD:2724
InParanoid:O08770 NextBio:605903 Genevestigator:O08770
GermOnline:ENSRNOG00000038540 Uniprot:O08770
Length = 567
Score = 263 (97.6 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 100/334 (29%), Positives = 154/334 (46%)
Query: 45 LYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYIS 104
L + + +S I+P F +L L L L+ N + + + D + LE L L+ L +
Sbjct: 79 LMLSDSHISAIDPGTFNDLVKLKTLRLTRNKISHLPRAILDKMVLLEQLFLDHNALRDLD 138
Query: 105 PSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWL 164
+ F L +L+ L L+QN+L S + L +LGKL LDL ++ +++LP + L
Sbjct: 139 QNLFQKLLNLRDLCLNQNQL-SFLPANL-FSSLGKLKVLDLSRNNLTHLPQGLLGAQIKL 196
Query: 165 RNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNP 224
L L N L+ LD + L NL L L L HL+ ++ AF + L TL LSGN
Sbjct: 197 EKLLLYSNRLMSLD--SGLLANLGALTELRLERNHLRS-IAPGAFDSLGNLSTLTLSGNL 253
Query: 225 LSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSP 284
L + ++ L ++ L RL+L L LP F L+EL ++ L A
Sbjct: 254 LESLPPALFLH-VSWLTRLTLFENPLEELPEVLFGEMAGLRELWLNGTHLRTLPAAAFRN 312
Query: 285 LESLEHLDMGYSNL-QRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNN 343
L L+ L + + L + F +T L+ L + N LE L + L L + L +
Sbjct: 313 LSGLQTLGLTRNPLLSALPPGMFHGLTELRVLAVHTNALEELPEDALRGLGRLRQVSLRH 372
Query: 344 CGLTRLNETVFHENYTYPDLEELRLSGNPLHVLP 377
L L T+F N + L ++L N L LP
Sbjct: 373 NRLRALPRTLFR-NLS--SLVTVQLEHNQLKTLP 403
Score = 261 (96.9 bits), Expect = 3.2e-19, P = 3.2e-19
Identities = 100/351 (28%), Positives = 156/351 (44%)
Query: 24 LNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPG 82
L+ + I ++ G F L L + +S + + L +L L N LR ++
Sbjct: 81 LSDSHISAIDPGTFNDLVKLKTLRLTRNKISHLPRAILDKMVLLEQLFLDHNALRDLDQN 140
Query: 83 VFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDT 142
+F L +L L LN+ L+++ + F +L LK L+LS+N L +H+ L LG KL+
Sbjct: 141 LFQKLLNLRDLCLNQNQLSFLPANLFSSLGKLKVLDLSRNNL-THLPQGL-LGAQIKLEK 198
Query: 143 LDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKG 202
L L + + +L + AN L L L N L +A +L +L +L LS +L
Sbjct: 199 LLLYSNRLMSLDSGLLANLGALTELRLERNHL--RSIAPGAFDSLGNLSTLTLSG-NLLE 255
Query: 203 PLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFT 262
L F++ + L L L NPL V + L L L L LPA F +
Sbjct: 256 SLPPALFLHVSWLTRLTLFENPLEELP-EVLFGEMAGLRELWLNGTHLRTLPAAAFRNLS 314
Query: 263 CLQELDISHNPLIDAFT-ALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNK 321
LQ L ++ NPL+ A + L L L + + L+ + + L+ + L N+
Sbjct: 315 GLQTLGLTRNPLLSALPPGMFHGLTELRVLAVHTNALEELPEDALRGLGRLRQVSLRHNR 374
Query: 322 LETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNP 372
L L LF+NL+ L ++L + L L VF P L + L NP
Sbjct: 375 LRALPRTLFRNLSSLVTVQLEHNQLKTLPGDVFA---ALPQLTRVLLGHNP 422
Score = 251 (93.4 bits), Expect = 4.0e-18, P = 4.0e-18
Identities = 105/336 (31%), Positives = 154/336 (45%)
Query: 19 LITINLNANPIQPVEGAFLVARSLL-YLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLR 77
L T+ L N I + A L LL L++ L ++ F L L L L+ N L
Sbjct: 100 LKTLRLTRNKISHLPRAILDKMVLLEQLFLDHNALRDLDQNLFQKLLNLRDLCLNQNQLS 159
Query: 78 IIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNL 137
+ +F L L+ L L+R NLT++ L+ L L N+L S +D L L NL
Sbjct: 160 FLPANLFSSLGKLKVLDLSRNNLTHLPQGLLGAQIKLEKLLLYSNRLMS-LDSGL-LANL 217
Query: 138 GKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSN 197
G L L L ++ + ++ F + L L L+ N L L A L ++ L L L
Sbjct: 218 GALTELRLERNHLRSIAPGAFDSLGNLSTLTLSGNLLESLPPALFL--HVSWLTRLTLFE 275
Query: 198 CHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSL-RNCGLSRLPAN 256
L+ L E F LR L+L+G L + A + L+ L L L RN LS LP
Sbjct: 276 NPLE-ELPEVLFGEMAGLRELWLNGTHLRTLP-AAAFRNLSGLQTLGLTRNPLLSALPPG 333
Query: 257 TFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLI 316
FH T L+ L + N L + L L L + + ++ L+ + R+ F ++SL T+
Sbjct: 334 MFHGLTELRVLAVHTNALEELPEDALRGLGRLRQVSLRHNRLRALPRTLFRNLSSLVTVQ 393
Query: 317 LSGNKLETLESGLFQNLTHLS-VLELNN-----CGL 346
L N+L+TL +F L L+ VL +N CGL
Sbjct: 394 LEHNQLKTLPGDVFAALPQLTRVLLGHNPWLCDCGL 429
Score = 247 (92.0 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 94/319 (29%), Positives = 143/319 (44%)
Query: 60 FTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLEL 119
F+ +T L +L LS + + I+PG F+ L L+ L L R ++++ + D + L+ L L
Sbjct: 70 FSGMTVLQRLMLSDSHISAIDPGTFNDLVKLKTLRLTRNKISHLPRAILDKMVLLEQLFL 129
Query: 120 SQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDV 179
N L+ +D L L L L L Q+ +S LP N+F++ L+ L+L+ N L L
Sbjct: 130 DHNALRD-LDQNL-FQKLLNLRDLCLNQNQLSFLPANLFSSLGKLKVLDLSRNNLTHLPQ 187
Query: 180 ATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTK 239
LG + L+ L L + L L N L L L N L + A L
Sbjct: 188 GL-LGAQ-IKLEKLLLYSNRLMS-LDSGLLANLGALTELRLERNHLRSIAPG-AFDSLGN 243
Query: 240 LHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQ 299
L L+L L LP F + L L + NPL + L + L L + ++L+
Sbjct: 244 LSTLTLSGNLLESLPPALFLHVSWLTRLTLFENPLEELPEVLFGEMAGLRELWLNGTHLR 303
Query: 300 RISRSTFLKMTSLKTLILSGNKL-ETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENY 358
+ + F ++ L+TL L+ N L L G+F LT L VL ++ L L E
Sbjct: 304 TLPAAAFRNLSGLQTLGLTRNPLLSALPPGMFHGLTELRVLAVHTNALEELPEDALRG-- 361
Query: 359 TYPDLEELRLSGNPLHVLP 377
L ++ L N L LP
Sbjct: 362 -LGRLRQVSLRHNRLRALP 379
Score = 242 (90.2 bits), Expect = 4.0e-17, P = 4.0e-17
Identities = 107/368 (29%), Positives = 168/368 (45%)
Query: 78 IIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNL 137
+++ F +T L+ LML+ +++ I P F++L LKTL L++NK+ SH+ +L +
Sbjct: 64 VLQSHSFSGMTVLQRLMLSDSHISAIDPGTFNDLVKLKTLRLTRNKI-SHLP-RAILDKM 121
Query: 138 GKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSN 197
L+ L L + + +L N+F LR+L L +N+L L L +L L LDLS
Sbjct: 122 VLLEQLFLDHNALRDLDQNLFQKLLNLRDLCLNQNQLSFLPA--NLFSSLGKLKVLDLSR 179
Query: 198 CHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANT 257
+L L + KL L L N L + D S L L L L L L +
Sbjct: 180 NNLTH-LPQGLLGAQIKLEKLLLYSNRLMSLD-SGLLANLGALTELRLERNHLRSIAPGA 237
Query: 258 FHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLIL 317
F L L +S N L AL + L L + + L+ + F +M L+ L L
Sbjct: 238 FDSLGNLSTLTLSGNLLESLPPALFLHVSWLTRLTLFENPLEELPEVLFGEMAGLRELWL 297
Query: 318 SGNKLETLESGLFQNLTHLSVLELN-NCGLTRLNETVFHENYTYPDLEELRLSGNPLHVL 376
+G L TL + F+NL+ L L L N L+ L +FH T +L L + N L L
Sbjct: 298 NGTHLRTLPAAAFRNLSGLQTLGLTRNPLLSALPPGMFH-GLT--ELRVLAVHTNALEEL 354
Query: 377 PDST-------KQYSMR-----TIPTQIWKNFDFLVILFILN---ETVFHENYT-YPDLE 420
P+ +Q S+R +P +++N LV + + + +T+ + + P L
Sbjct: 355 PEDALRGLGRLRQVSLRHNRLRALPRTLFRNLSSLVTVQLEHNQLKTLPGDVFAALPQLT 414
Query: 421 ELRLSGNP 428
+ L NP
Sbjct: 415 RVLLGHNP 422
Score = 217 (81.4 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 101/371 (27%), Positives = 161/371 (43%)
Query: 110 NLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNL 169
NL H+ + + L+SH + L L L S IS + F + L+ L L
Sbjct: 51 NLTHILLFRMDRGVLQSHS-----FSGMTVLQRLMLSDSHISAIDPGTFNDLVKLKTLRL 105
Query: 170 AENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAAD 229
N++ L A +V L+ L L + L+ L ++ F LR L L+ N LS
Sbjct: 106 TRNKISHLPRAIL--DKMVLLEQLFLDHNALRD-LDQNLFQKLLNLRDLCLNQNQLSFLP 162
Query: 230 LSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLE 289
++ L KL L L L+ LP L++L + N L+ + LL+ L +L
Sbjct: 163 ANL-FSSLGKLKVLDLSRNNLTHLPQGLLGAQIKLEKLLLYSNRLMSLDSGLLANLGALT 221
Query: 290 HLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRL 349
L + ++L+ I+ F + +L TL LSGN LE+L LF +++ L+ L L L L
Sbjct: 222 ELRLERNHLRSIAPGAFDSLGNLSTLTLSGNLLESLPPALFLHVSWLTRLTLFENPLEEL 281
Query: 350 NETVFHENYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQ-IWKNFDFLVILFILNET 408
E +F E L EL L+G L LP + + ++ + T + +N +L L
Sbjct: 282 PEVLFGE---MAGLRELWLNGTHLRTLPAAAFR-NLSGLQTLGLTRN----PLLSALPPG 333
Query: 409 VFHENYTYPDLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRN 468
+FH T +L L + N L LP ++ LP +F N +
Sbjct: 334 MFH-GLT--ELRVLAVHTNALEELP--EDALRGLGRLRQVSLRHNRLRALPRTLFRNLSS 388
Query: 469 ITSLNLANNNL 479
+ ++ L +N L
Sbjct: 389 LVTVQLEHNQL 399
Score = 186 (70.5 bits), Expect = 5.5e-11, P = 5.5e-11
Identities = 90/370 (24%), Positives = 145/370 (39%)
Query: 190 LDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCG 249
L L LS+ H+ + F + KL+TL L+ N +S ++ L + L +L L +
Sbjct: 76 LQRLMLSDSHISA-IDPGTFNDLVKLKTLRLTRNKISHLPRAI-LDKMVLLEQLFLDHNA 133
Query: 250 LSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKM 309
L L N F + L++L ++ N L L S L L+ LD+ +NL + +
Sbjct: 134 LRDLDQNLFQKLLNLRDLCLNQNQLSFLPANLFSSLGKLKVLDLSRNNLTHLPQGLLGAQ 193
Query: 310 TSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLS 369
L+ L+L N+L +L+SGL NL L+ L L L + F + +L L LS
Sbjct: 194 IKLEKLLLYSNRLMSLDSGLLANLGALTELRLERNHLRSIAPGAFD---SLGNLSTLTLS 250
Query: 370 GNPLHVLPDSTKQYSMRTIPTQIWKN--FDFLVILFI----LNETVFHENY--TYP---- 417
GN L LP + + +++N + +LF L E + + T P
Sbjct: 251 GNLLESLPPALFLHVSWLTRLTLFENPLEELPEVLFGEMAGLRELWLNGTHLRTLPAAAF 310
Query: 418 ----DLEELRLSGNPL-HVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSL 472
L+ L L+ NPL LP G ++ LP + + +
Sbjct: 311 RNLSGLQTLGLTRNPLLSALPPGMFHGLTELRVLAVHTNA--LEELPEDALRGLGRLRQV 368
Query: 473 NLANNNLSMTSELSFQFXXXXXXXXXXXXXXXXXTHISPTVLRHNRAITSIKLVGNPWKC 532
+L +N L F+ + V +T + L NPW C
Sbjct: 369 SLRHNRLRALPRTLFRNLSSLVTVQLEHNQLKT---LPGDVFAALPQLTRVLLGHNPWLC 425
Query: 533 DCNIADMWEW 542
DC + +W
Sbjct: 426 DCGLWPFLQW 435
Score = 180 (68.4 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 64/213 (30%), Positives = 102/213 (47%)
Query: 14 LDNPGLIT-INLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDL 71
L N G +T + L N ++ + GAF +L L + L + P F +++ L +L L
Sbjct: 214 LANLGALTELRLERNHLRSIAPGAFDSLGNLSTLTLSGNLLESLPPALFLHVSWLTRLTL 273
Query: 72 SGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWT 131
NPL + +F + L L LN +L + +AF NL+ L+TL L++N L S +
Sbjct: 274 FENPLEELPEVLFGEMAGLRELWLNGTHLRTLPAAAFRNLSGLQTLGLTRNPLLSALPPG 333
Query: 132 LVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLD 191
+ G L +L L + + + LP++ LR ++L N L L TL +NL L
Sbjct: 334 MFHG-LTELRVLAVHTNALEELPEDALRGLGRLRQVSLRHNRLRALP--RTLFRNLSSLV 390
Query: 192 SLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNP 224
++ L + LK L D F +L + L NP
Sbjct: 391 TVQLEHNQLK-TLPGDVFAALPQLTRVLLGHNP 422
Score = 121 (47.7 bits), Expect = 0.00066, P = 0.00066
Identities = 67/252 (26%), Positives = 99/252 (39%)
Query: 238 TKLHRLSLRNCGLSRLPANTFHRFTCLQELDIS--HNPLIDAFTALLSPLESLEHLDMGY 295
T L + L L +++F T LQ L +S H ID T + L L+ L +
Sbjct: 50 TNLTHILLFRMDRGVLQSHSFSGMTVLQRLMLSDSHISAIDPGT--FNDLVKLKTLRLTR 107
Query: 296 SNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFH 355
+ + + R+ KM L+ L L N L L+ LFQ L +L L LN L+ L +F
Sbjct: 108 NKISHLPRAILDKMVLLEQLFLDHNALRDLDQNLFQKLLNLRDLCLNQNQLSFLPANLFS 167
Query: 356 ENYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYT 415
+ L+ L LS N L LP ++ ++ N L L+ +
Sbjct: 168 ---SLGKLKVLDLSRNNLTHLPQGLLGAQIKLEKLLLYSNR-----LMSLDSGLLAN--- 216
Query: 416 YPDLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLA 475
L ELRL N L + G ++ LPP +F + +T L L
Sbjct: 217 LGALTELRLERNHLRSIAPGAFDSLGNLSTLTLSGNL--LESLPPALFLHVSWLTRLTLF 274
Query: 476 NNNLSMTSELSF 487
N L E+ F
Sbjct: 275 ENPLEELPEVLF 286
>WB|WBGene00002282 [details] [associations]
symbol:let-4 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0002064
"epithelial cell development" evidence=IMP] [GO:0035150 "regulation
of tube size" evidence=IMP] [GO:0045177 "apical part of cell"
evidence=IDA] InterPro:IPR001611 PROSITE:PS51450 GO:GO:0009792
GO:GO:0006898 GO:GO:0040010 GO:GO:0002119 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 GO:GO:0045177 GO:GO:0040011
GO:GO:0040018 GO:GO:0002064 GeneTree:ENSGT00700000104286
GO:GO:0035150 EMBL:Z79598 EMBL:JQ292907 RefSeq:NP_510425.2
ProteinModelPortal:Q93373 SMR:Q93373 STRING:Q93373
EnsemblMetazoa:C44H4.2 GeneID:181554 KEGG:cel:CELE_C44H4.2
CTD:181554 WormBase:C44H4.2 HOGENOM:HOG000018354 OMA:PLVCTEN
Uniprot:Q93373
Length = 773
Score = 264 (98.0 bits), Expect = 2.9e-19, P = 2.9e-19
Identities = 94/339 (27%), Positives = 160/339 (47%)
Query: 45 LYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTS-LEYLMLNRCNLTYI 103
L M + L ++ P FF+ L + +LDLS N ++ I+ F + LE ++LN + +
Sbjct: 67 LTMNQAELVELPPNFFSGLF-IRRLDLSQNKIKKIDDAAFAGINPVLEEVVLNHNLIEKV 125
Query: 104 SPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFAN-NT 162
+A L +L L+LS N + I + NL KL ++L + I ++ + F N
Sbjct: 126 PAAALAGLPNLLRLDLSNNSIVE-IQEQEIFPNLNKLYDINLGSNKIFSIHTSTFQNVKN 184
Query: 163 WLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSG 222
++ +NL N + + + G L L SL L ++ L F+N L L L+G
Sbjct: 185 SIQTINLGHNNMTAVPSSAIRG--LKQLQSLHLHKNRIE-QLDALNFLNLPVLNLLNLAG 241
Query: 223 NPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTA-L 281
N + + L + L L L +++L A F F L+ LD+++N I A A
Sbjct: 242 NQIHELNRQAFLN-VPSLRYLYLSGNKITKLTAYQFQTFEQLEMLDLTNNE-IGAIPANS 299
Query: 282 LSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLEL 341
LS L+ L L + ++ + IS + F +S+ L+LS N+L+TL +G+ L +L +
Sbjct: 300 LSGLKQLRQLYLAHNKISNISSNAFTN-SSIVVLVLSSNELKTLTAGIISGLPNLQQVSF 358
Query: 342 NNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDST 380
+ + +N F Y L L L+ N L + +T
Sbjct: 359 RDNQIKTINRNAF---YDAASLVMLDLAKNQLTEIAPTT 394
Score = 211 (79.3 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 96/373 (25%), Positives = 170/373 (45%)
Query: 22 INLNANPIQPVE-GAFLVARSLLY-LYMQECTLSKINPQFFTNLTTLNKLDLSGNPL-RI 78
++L+ N I+ ++ AF +L + + + K+ L L +LDLS N + I
Sbjct: 90 LDLSQNKIKKIDDAAFAGINPVLEEVVLNHNLIEKVPAAALAGLPNLLRLDLSNNSIVEI 149
Query: 79 IEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNL-NHLKTLELSQNKLKSHIDWTLVLGNL 137
E +F L L + L + I S F N+ N ++T+ L N + + + + + G L
Sbjct: 150 QEQEIFPNLNKLYDINLGSNKIFSIHTSTFQNVKNSIQTINLGHNNMTA-VPSSAIRG-L 207
Query: 138 GKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSN 197
+L +L L ++ I L F N L LNLA N++ +L+ L N+ L L LS
Sbjct: 208 KQLQSLHLHKNRIEQLDALNFLNLPVLNLLNLAGNQIHELNRQAFL--NVPSLRYLYLSG 265
Query: 198 CHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANT 257
+ L+ F +L L L+ N + A + +L L +L +L L + +S + +N
Sbjct: 266 NKIT-KLTAYQFQTFEQLEMLDLTNNEIGAIPAN-SLSGLKQLRQLYLAHNKISNISSNA 323
Query: 258 FHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLIL 317
F + + L +S N L ++S L +L+ + + ++ I+R+ F SL L L
Sbjct: 324 FTN-SSIVVLVLSSNELKTLTAGIISGLPNLQQVSFRDNQIKTINRNAFYDAASLVMLDL 382
Query: 318 SGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRL-SGNPLHVL 376
+ N+L + F +L +++L+ L + + F+ L+E L LH+L
Sbjct: 383 AKNQLTEIAPTTFLAQLNLLLVDLSENKLPKTPYSAFNSRVGTVLLKENPLVCTENLHML 442
Query: 377 PDSTKQYSMRTIP 389
T Y +R P
Sbjct: 443 QQGTGVY-VRDSP 454
Score = 201 (75.8 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 82/352 (23%), Positives = 155/352 (44%)
Query: 137 LGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLS 196
+G + +L + Q+ + LP N F+ ++R L+L++N++ +D A G N V L+ + L
Sbjct: 61 VGLIQSLTMNQAELVELPPNFFSG-LFIRRLDLSQNKIKKIDDAAFAGINPV-LEEVVL- 117
Query: 197 NCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPAN 256
N +L + A L L LS N + L KL+ ++L + + + +
Sbjct: 118 NHNLIEKVPAAALAGLPNLLRLDLSNNSIVEIQEQEIFPNLNKLYDINLGSNKIFSIHTS 177
Query: 257 TFHRF-TCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTL 315
TF +Q +++ HN + ++ + L+ L+ L + + ++++ FL + L L
Sbjct: 178 TFQNVKNSIQTINLGHNNMTAVPSSAIRGLKQLQSLHLHKNRIEQLDALNFLNLPVLNLL 237
Query: 316 ILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHV 375
L+GN++ L F N+ L L L+ +T+L F T+ LE L L+ N +
Sbjct: 238 NLAGNQIHELNRQAFLNVPSLRYLYLSGNKITKLTAYQFQ---TFEQLEMLDLTNNEIGA 294
Query: 376 LPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTYPDLEELRLSGNPLHVLPTG 435
+P ++ ++ + Q+ +L I N + +T + L LS N L L G
Sbjct: 295 IPANSLS-GLKQL-RQL-----YLAHNKISN--ISSNAFTNSSIVVLVLSSNELKTLTAG 345
Query: 436 NXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSF 487
K + N F + ++ L+LA N L+ + +F
Sbjct: 346 IISGLPNLQQVSFRDNQIKT--INRNAFYDAASLVMLDLAKNQLTEIAPTTF 395
Score = 189 (71.6 bits), Expect = 4.3e-11, P = 4.3e-11
Identities = 75/268 (27%), Positives = 129/268 (48%)
Query: 12 RNLDNPGLITINLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLD 70
+N+ N + TINL N + V A + L L++ + + +++ F NL LN L+
Sbjct: 180 QNVKN-SIQTINLGHNNMTAVPSSAIRGLKQLQSLHLHKNRIEQLDALNFLNLPVLNLLN 238
Query: 71 LSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDW 130
L+GN + + F + SL YL L+ +T ++ F L+ L+L+ N++ + I
Sbjct: 239 LAGNQIHELNRQAFLNVPSLRYLYLSGNKITKLTAYQFQTFEQLEMLDLTNNEIGA-IPA 297
Query: 131 TLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHL 190
+ G L +L L L + ISN+ N F N++ + L L+ NEL L G L +L
Sbjct: 298 NSLSG-LKQLRQLYLAHNKISNISSNAFTNSS-IVVLVLSSNELKTLTAGIISG--LPNL 353
Query: 191 DSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGL 250
+ + +K ++ +AF +A L L L+ N L+ + P T L +L+L L
Sbjct: 354 QQVSFRDNQIK-TINRNAFYDAASLVMLDLAKNQLTE------IAPTTFLAQLNLLLVDL 406
Query: 251 S--RLPANTFHRFTC-LQELDISHNPLI 275
S +LP + F + + + NPL+
Sbjct: 407 SENKLPKTPYSAFNSRVGTVLLKENPLV 434
Score = 168 (64.2 bits), Expect = 8.2e-09, P = 8.2e-09
Identities = 67/288 (23%), Positives = 128/288 (44%)
Query: 90 LEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSG 149
++ L +N+ L + P+ F L ++ L+LSQNK+K ID G L+ + L +
Sbjct: 64 IQSLTMNQAELVELPPNFFSGL-FIRRLDLSQNKIKK-IDDAAFAGINPVLEEVVLNHNL 121
Query: 150 ISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAF 209
I +P A L L+L+ N ++++ + NL L ++L + + + F
Sbjct: 122 IEKVPAAALAGLPNLLRLDLSNNSIVEIQ-EQEIFPNLNKLYDINLGSNKIFS-IHTSTF 179
Query: 210 VNA-TKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELD 268
N ++T+ L N ++A S A++ L +L L L + +L A F L L+
Sbjct: 180 QNVKNSIQTINLGHNNMTAVPSS-AIRGLKQLQSLHLHKNRIEQLDALNFLNLPVLNLLN 238
Query: 269 ISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESG 328
++ N + + + SL +L + + + +++ F L+ L L+ N++ + +
Sbjct: 239 LAGNQIHELNRQAFLNVPSLRYLYLSGNKITKLTAYQFQTFEQLEMLDLTNNEIGAIPAN 298
Query: 329 LFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVL 376
L L L L + ++ ++ F T + L LS N L L
Sbjct: 299 SLSGLKQLRQLYLAHNKISNISSNAF----TNSSIVVLVLSSNELKTL 342
>UNIPROTKB|Q9HBX8 [details] [associations]
symbol:LGR6 "Leucine-rich repeat-containing G-protein
coupled receptor 6" species:9606 "Homo sapiens" [GO:0016500
"protein-hormone receptor activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002131 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS00237 PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021
GO:GO:0005886 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 SMART:SM00013 GO:GO:0016500 HOVERGEN:HBG031675
EMBL:AF190501 EMBL:AY358119 EMBL:AL356953 EMBL:BC047905
EMBL:AB049405 EMBL:AB083616 EMBL:AK027377 IPI:IPI00151908
IPI:IPI00479360 IPI:IPI00514691 RefSeq:NP_001017403.1
RefSeq:NP_001017404.1 RefSeq:NP_067649.2 UniGene:Hs.497402
ProteinModelPortal:Q9HBX8 SMR:Q9HBX8 STRING:Q9HBX8
PhosphoSite:Q9HBX8 DMDM:158519993 PaxDb:Q9HBX8 PRIDE:Q9HBX8
Ensembl:ENST00000255432 Ensembl:ENST00000367278
Ensembl:ENST00000439764 GeneID:59352 KEGG:hsa:59352 UCSC:uc001gxu.3
UCSC:uc001gxv.3 UCSC:uc001gxw.3 CTD:59352 GeneCards:GC01P202163
HGNC:HGNC:19719 MIM:606653 neXtProt:NX_Q9HBX8 PharmGKB:PA134927114
InParanoid:Q9HBX8 KO:K08399 OrthoDB:EOG4SQWW8 GenomeRNAi:59352
NextBio:65269 ArrayExpress:Q9HBX8 Bgee:Q9HBX8 CleanEx:HS_LGR6
Genevestigator:Q9HBX8 Uniprot:Q9HBX8
Length = 967
Score = 265 (98.3 bits), Expect = 3.4e-19, P = 3.4e-19
Identities = 87/323 (26%), Positives = 156/323 (48%)
Query: 17 PGLITINLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNP 75
P L ++ L+AN I V E +F SL +L++ + L++I + NL L + L+ N
Sbjct: 138 PSLQSLRLDANLISLVPERSFEGLSSLRHLWLDDNALTEIPVRALNNLPALQAMTLALNR 197
Query: 76 LRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLG 135
+ I F LTSL L L+ + ++ +F+ L++L+TL+L+ NKL+ ++ + +
Sbjct: 198 ISHIPDYAFQNLTSLVVLHLHNNRIQHLGTHSFEGLHNLETLDLNYNKLQ---EFPVAIR 254
Query: 136 NLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDL 195
LG+L L + I +P+ F N L+ ++ +N + V + Q L L +L L
Sbjct: 255 TLGRLQELGFHNNNIKAIPEKAFMGNPLLQTIHFYDNPI--QFVGRSAFQYLPKLHTLSL 312
Query: 196 SNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPA 255
+ + + ++ TL +G L + + + L +L L L + + LP+
Sbjct: 313 NGAMDIQEFPDLKGTTSLEILTLTRAGIRLLPSGMC---QQLPRLRVLELSHNQIEELPS 369
Query: 256 NTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTL 315
HR L+E+ + HN + + S L SL+ LD+ ++ ++ I F + SL L
Sbjct: 370 --LHRCQKLEEIGLQHNRIWEIGADTFSQLSSLQALDLSWNAIRSIHPEAFSTLHSLVKL 427
Query: 316 ILSGNKLETLESGLFQNLTHLSV 338
L+ N+L TL L HL +
Sbjct: 428 DLTDNQLTTLPLAGLGGLMHLKL 450
Score = 245 (91.3 bits), Expect = 5.0e-17, P = 5.0e-17
Identities = 101/353 (28%), Positives = 160/353 (45%)
Query: 22 INLNANPIQPVEG-AFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIE 80
+ L+ N + + G AF SL L +Q L I + L +L L L N + ++
Sbjct: 95 LRLSGNHLSHIPGQAFSGLYSLKILMLQNNQLGGIPAEALWELPSLQSLRLDANLISLVP 154
Query: 81 PGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKL 140
F+ L+SL +L L+ LT I A +NL L+ + L+ N++ SHI NL L
Sbjct: 155 ERSFEGLSSLRHLWLDDNALTEIPVRALNNLPALQAMTLALNRI-SHIP-DYAFQNLTSL 212
Query: 141 DTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVAT-TLGQNLVHLDSLDLSNCH 199
L L + I +L + F L L+L N+L + VA TLG+ L L N +
Sbjct: 213 VVLHLHNNRIQHLGTHSFEGLHNLETLDLNYNKLQEFPVAIRTLGR----LQELGFHNNN 268
Query: 200 LKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNC----------- 248
+K + E AF+ L+T++ NP+ S A + L KLH LSL
Sbjct: 269 IKA-IPEKAFMGNPLLQTIHFYDNPIQFVGRS-AFQYLPKLHTLSLNGAMDIQEFPDLKG 326
Query: 249 ------------GLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYS 296
G+ LP+ + L+ L++SHN I+ +L + LE + + ++
Sbjct: 327 TTSLEILTLTRAGIRLLPSGMCQQLPRLRVLELSHNQ-IEELPSL-HRCQKLEEIGLQHN 384
Query: 297 NLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRL 349
+ I TF +++SL+ L LS N + ++ F L L L+L + LT L
Sbjct: 385 RIWEIGADTFSQLSSLQALDLSWNAIRSIHPEAFSTLHSLVKLDLTDNQLTTL 437
Score = 226 (84.6 bits), Expect = 5.8e-15, P = 5.8e-15
Identities = 115/383 (30%), Positives = 165/383 (43%)
Query: 69 LDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHI 128
LDLS N L ++PG+F L LE L L+ +L++I AF L LK L L N+L I
Sbjct: 71 LDLSMNNLTELQPGLFHHLRFLEELRLSGNHLSHIPGQAFSGLYSLKILMLQNNQLGG-I 129
Query: 129 DWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLV 188
L L L +L L + IS +P+ F + LR+L L +N L ++ V NL
Sbjct: 130 P-AEALWELPSLQSLRLDANLISLVPERSFEGLSSLRHLWLDDNALTEIPVRAL--NNLP 186
Query: 189 HLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNC 248
L ++ L+ + + + AF N T L L+L N + + + L L L L
Sbjct: 187 ALQAMTLALNRISH-IPDYAFQNLTSLVVLHLHNNRIQHLGTH-SFEGLHNLETLDLNYN 244
Query: 249 GLSRLPANTFHRFTCLQELDISHNPLIDAFT--ALL-SPLESLEHLDMGYSN-LQRISRS 304
L P LQEL HN I A A + +PL H Y N +Q + RS
Sbjct: 245 KLQEFPV-AIRTLGRLQELGF-HNNNIKAIPEKAFMGNPLLQTIHF---YDNPIQFVGRS 299
Query: 305 TFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLE 364
F + L TL L+G ++ E + T L +L L G+ L + + P L
Sbjct: 300 AFQYLPKLHTLSLNG-AMDIQEFPDLKGTTSLEILTLTRAGIRLLPSGMCQQ---LPRLR 355
Query: 365 ELRLSGNPLHVLPDSTKQYSMRTIPTQ---IWK----NFDFLVILFILN------ETVFH 411
L LS N + LP + + I Q IW+ F L L L+ ++
Sbjct: 356 VLELSHNQIEELPSLHRCQKLEEIGLQHNRIWEIGADTFSQLSSLQALDLSWNAIRSIHP 415
Query: 412 ENY-TYPDLEELRLSGNPLHVLP 433
E + T L +L L+ N L LP
Sbjct: 416 EAFSTLHSLVKLDLTDNQLTTLP 438
Score = 216 (81.1 bits), Expect = 7.1e-14, P = 7.1e-14
Identities = 103/345 (29%), Positives = 148/345 (42%)
Query: 44 YLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYI 103
YL + L+++ P F +L L +L LSGN L I F L SL+ LML L I
Sbjct: 70 YLDLSMNNLTELQPGLFHHLRFLEELRLSGNHLSHIPGQAFSGLYSLKILMLQNNQLGGI 129
Query: 104 SPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTW 163
A L L++L L N L S + G L L L L + ++ +P N
Sbjct: 130 PAEALWELPSLQSLRLDAN-LISLVPERSFEG-LSSLRHLWLDDNALTEIPVRALNNLPA 187
Query: 164 LRNLNLAENELIDL-DVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSG 222
L+ + LA N + + D A QNL L L L N ++ L +F L TL L+
Sbjct: 188 LQAMTLALNRISHIPDYAF---QNLTSLVVLHLHNNRIQH-LGTHSFEGLHNLETLDLNY 243
Query: 223 NPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALL 282
N L + VA++ L +L L N + +P F LQ + NP+ +
Sbjct: 244 NKLQ--EFPVAIRTLGRLQELGFHNNNIKAIPEKAFMGNPLLQTIHFYDNPIQFVGRSAF 301
Query: 283 SPLESLEHLDM-GYSNLQRISRSTFLK-MTSLKTLILSGNKLETLESGLFQNLTHLSVLE 340
L L L + G ++Q LK TSL+ L L+ + L SG+ Q L L VLE
Sbjct: 302 QYLPKLHTLSLNGAMDIQEFPD---LKGTTSLEILTLTRAGIRLLPSGMCQQLPRLRVLE 358
Query: 341 LNNCGLTRLNETVFHENYTYPDLEELRLSGNPL-HVLPDSTKQYS 384
L++ + L H LEE+ L N + + D+ Q S
Sbjct: 359 LSHNQIEELPS--LHR---CQKLEEIGLQHNRIWEIGADTFSQLS 398
Score = 203 (76.5 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 90/302 (29%), Positives = 133/302 (44%)
Query: 81 PGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKL 140
PG DPLT+ YL L+ NLT + P F +L L+ L LS N L SHI G L L
Sbjct: 61 PGDLDPLTA--YLDLSMNNLTELQPGLFHHLRFLEELRLSGNHL-SHIPGQAFSG-LYSL 116
Query: 141 DTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHL 200
L L+ + + +P L++L L N LI L V + L L L L + L
Sbjct: 117 KILMLQNNQLGGIPAEALWELPSLQSLRLDAN-LISL-VPERSFEGLSSLRHLWLDDNAL 174
Query: 201 KGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHR 260
+ A N L+ + L+ N +S A + LT L L L N + L ++F
Sbjct: 175 T-EIPVRALNNLPALQAMTLALNRISHIP-DYAFQNLTSLVVLHLHNNRIQHLGTHSFEG 232
Query: 261 FTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGN 320
L+ LD+++N L + F + L L+ L +N++ I F+ L+T+ N
Sbjct: 233 LHNLETLDLNYNKLQE-FPVAIRTLGRLQELGFHNNNIKAIPEKAFMGNPLLQTIHFYDN 291
Query: 321 KLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDST 380
++ + FQ L L L LN G + E F + LE L L+ + +LP
Sbjct: 292 PIQFVGRSAFQYLPKLHTLSLN--GAMDIQE--FPDLKGTTSLEILTLTRAGIRLLPSGM 347
Query: 381 KQ 382
Q
Sbjct: 348 CQ 349
Score = 163 (62.4 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 68/246 (27%), Positives = 106/246 (43%)
Query: 138 GKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSN 197
G + + D + G+S +P ++ +L +L+ N L +L L +L L+ L LS
Sbjct: 45 GIMLSADCSELGLSAVPGDLDPLTAYL---DLSMNNLTELQPG--LFHHLRFLEELRLSG 99
Query: 198 CHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANT 257
HL + AF L+ L L N L AL L L L L +S +P +
Sbjct: 100 NHLSH-IPGQAFSGLYSLKILMLQNNQLGGIPAE-ALWELPSLQSLRLDANLISLVPERS 157
Query: 258 FHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLIL 317
F + L+ L + N L + L+ L +L+ + + + + I F +TSL L L
Sbjct: 158 FEGLSSLRHLWLDDNALTEIPVRALNNLPALQAMTLALNRISHIPDYAFQNLTSLVVLHL 217
Query: 318 SGNKLETLESGLFQNLTHLSVLELNNCGLT----------RLNETVFHENYTYPDLEELR 367
N+++ L + F+ L +L L+LN L RL E FH N + E
Sbjct: 218 HNNRIQHLGTHSFEGLHNLETLDLNYNKLQEFPVAIRTLGRLQELGFHNN-NIKAIPEKA 276
Query: 368 LSGNPL 373
GNPL
Sbjct: 277 FMGNPL 282
Score = 158 (60.7 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 97/364 (26%), Positives = 156/364 (42%)
Query: 20 ITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRII 79
+++N N +QP G F R L L + LS I Q F+ L +L L L N L I
Sbjct: 73 LSMN-NLTELQP--GLFHHLRFLEELRLSGNHLSHIPGQAFSGLYSLKILMLQNNQLGGI 129
Query: 80 EPGVFDPLTSLEYLMLNRCNLTYISPS-AFDNLNHLKTLELSQNKLKSHIDWTLVLGNLG 138
L SL+ L L+ NL + P +F+ L+ L+ L L N L + I L NL
Sbjct: 130 PAEALWELPSLQSLRLD-ANLISLVPERSFEGLSSLRHLWLDDNAL-TEIP-VRALNNLP 186
Query: 139 KLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNC 198
L + L + IS++PD F N T L L+L N + L T + L +L++LDL+
Sbjct: 187 ALQAMTLALNRISHIPDYAFQNLTSLVVLHLHNNRIQHL--GTHSFEGLHNLETLDLNYN 244
Query: 199 HLKG-PLSEDAFVNATKLRTLYLSGNPLSAADLSVAL-KPLTKLHRLSLRNCGLSRLPAN 256
L+ P+ A +L+ L N + A + PL L + + + + +
Sbjct: 245 KLQEFPV---AIRTLGRLQELGFHNNNIKAIPEKAFMGNPL--LQTIHFYDNPIQFVGRS 299
Query: 257 TFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLI 316
F L L ++ I F L SLE L + + ++ + ++ L+ L
Sbjct: 300 AFQYLPKLHTLSLNGAMDIQEFPDLKGTT-SLEILTLTRAGIRLLPSGMCQQLPRLRVLE 358
Query: 317 LSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVL 376
LS N++E L S L + L + + + F + L+ L LS N + +
Sbjct: 359 LSHNQIEELPS--LHRCQKLEEIGLQHNRIWEIGADTFSQ---LSSLQALDLSWNAIRSI 413
Query: 377 -PDS 379
P++
Sbjct: 414 HPEA 417
Score = 142 (55.0 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 79/325 (24%), Positives = 132/325 (40%)
Query: 126 SHIDWTLVLGNLGKLDT-LDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLG 184
S + + V G+L L LDL + ++ L +F + +L L L+ N L + G
Sbjct: 53 SELGLSAVPGDLDPLTAYLDLSMNNLTELQPGLFHHLRFLEELRLSGNHLSHIPGQAFSG 112
Query: 185 QNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLS 244
L L L L N L G + +A L++L L N +S + + L+ L L
Sbjct: 113 --LYSLKILMLQNNQLGG-IPAEALWELPSLQSLRLDANLISLVP-ERSFEGLSSLRHLW 168
Query: 245 LRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRS 304
L + L+ +P + LQ + ++ N + L SL L + + +Q +
Sbjct: 169 LDDNALTEIPVRALNNLPALQAMTLALNRISHIPDYAFQNLTSLVVLHLHNNRIQHLGTH 228
Query: 305 TFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLE 364
+F + +L+TL L+ NKL+ + + L L L +N + + E F N P L+
Sbjct: 229 SFEGLHNLETLDLNYNKLQEFPVAI-RTLGRLQELGFHNNNIKAIPEKAFMGN---PLLQ 284
Query: 365 ELRLSGNPLHVLPDSTKQY--SMRTIPT------QIWKNFDFLVILFILNET-----VFH 411
+ NP+ + S QY + T+ Q + + L IL T +
Sbjct: 285 TIHFYDNPIQFVGRSAFQYLPKLHTLSLNGAMDIQEFPDLKGTTSLEILTLTRAGIRLLP 344
Query: 412 ENYTY--PDLEELRLSGNPLHVLPT 434
P L L LS N + LP+
Sbjct: 345 SGMCQQLPRLRVLELSHNQIEELPS 369
>UNIPROTKB|Q6UY18 [details] [associations]
symbol:LINGO4 "Leucine-rich repeat and immunoglobulin-like
domain-containing nogo receptor-interacting protein 4" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 EMBL:AL589765
HSSP:Q9BZR6 HOGENOM:HOG000246971 HOVERGEN:HBG057546 EMBL:AY358115
IPI:IPI00258050 RefSeq:NP_001004432.1 UniGene:Hs.591477
ProteinModelPortal:Q6UY18 SMR:Q6UY18 STRING:Q6UY18
PhosphoSite:Q6UY18 DMDM:74762377 PRIDE:Q6UY18
Ensembl:ENST00000368820 GeneID:339398 KEGG:hsa:339398
UCSC:uc001ezf.1 CTD:339398 GeneCards:GC01M151775 HGNC:HGNC:31814
MIM:609794 neXtProt:NX_Q6UY18 PharmGKB:PA162394098 eggNOG:NOG306417
InParanoid:Q6UY18 OMA:EPPNGTL OrthoDB:EOG49KFQ7 GenomeRNAi:339398
NextBio:97381 Bgee:Q6UY18 CleanEx:HS_LINGO4 Genevestigator:Q6UY18
Uniprot:Q6UY18
Length = 593
Score = 248 (92.4 bits), Expect = 4.0e-19, Sum P(2) = 4.0e-19
Identities = 84/255 (32%), Positives = 122/255 (47%)
Query: 22 INLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIE 80
++L+ N + +E GAF +SLL L +Q L + P F+ L+ L LDL N + +
Sbjct: 89 LDLSYNQLSTLEPGAFHGLQSLLTLRLQGNRLRIMGPGVFSGLSALTLLDLRLNQIVLFL 148
Query: 81 PGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKL 140
G F L SL+ L + +L +++P AF L L TL L + L S + L L L L
Sbjct: 149 DGAFGELGSLQKLEVGDNHLVFVAPGAFAGLAKLSTLTLERCNL-STVPG-LALARLPAL 206
Query: 141 DTLDLRQSGISNLPDNVFANNTWLRNLNL-AENELIDLDVATTLGQNLVHLDSLDLSNCH 199
L LR+ I LP L+ L + L LD + +G NL SL ++ C+
Sbjct: 207 VALRLRELDIGRLPAGALRGLGQLKELEIHLWPSLEALDPGSLVGLNL---SSLAITRCN 263
Query: 200 LKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFH 259
L + A + + LR L LS NP+SA L PL +L L L L+ + A+ FH
Sbjct: 264 LSS-VPFQALYHLSFLRVLDLSQNPISAIPAR-RLSPLVRLQELRLSGACLTSIAAHAFH 321
Query: 260 RFTCLQELDISHNPL 274
T LD++ N L
Sbjct: 322 GLTAFHLLDVADNAL 336
Score = 233 (87.1 bits), Expect = 1.9e-17, Sum P(2) = 1.9e-17
Identities = 91/290 (31%), Positives = 131/290 (45%)
Query: 61 TNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELS 120
+ L+ L +LDLS N L +EPG F L SL L L L + P F L+ L L+L
Sbjct: 81 SRLSLLQELDLSYNQLSTLEPGAFHGLQSLLTLRLQGNRLRIMGPGVFSGLSALTLLDLR 140
Query: 121 QNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVA 180
N++ +D G LG L L++ + + + FA L L L E +L
Sbjct: 141 LNQIVLFLDGAF--GELGSLQKLEVGDNHLVFVAPGAFAGLAKLSTLTL---ERCNLSTV 195
Query: 181 TTLG-QNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNP-LSAADLSVALKPLT 238
L L L +L L + G L A +L+ L + P L A D +L L
Sbjct: 196 PGLALARLPALVALRLRELDI-GRLPAGALRGLGQLKELEIHLWPSLEALDPG-SLVGLN 253
Query: 239 KLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTAL-LSPLESLEHLDMGYSN 297
L L++ C LS +P + + L+ LD+S NP I A A LSPL L+ L + +
Sbjct: 254 -LSSLAITRCNLSSVPFQALYHLSFLRVLDLSQNP-ISAIPARRLSPLVRLQELRLSGAC 311
Query: 298 LQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLT 347
L I+ F +T+ L ++ N L+TLE F + L L L+ LT
Sbjct: 312 LTSIAAHAFHGLTAFHLLDVADNALQTLEETAFPSPDKLVTLRLSGNPLT 361
Score = 211 (79.3 bits), Expect = 5.3e-15, Sum P(2) = 5.3e-15
Identities = 97/312 (31%), Positives = 136/312 (43%)
Query: 69 LDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHI 128
LDLSGN L ++ G+ L+ L+ L L+ L+ + P AF L L TL L N+L+ I
Sbjct: 65 LDLSGNRLWGLQQGMLSRLSLLQELDLSYNQLSTLEPGAFHGLQSLLTLRLQGNRLR--I 122
Query: 129 DWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLV 188
V L L LDLR + I D F L+ L + +N L+ + G L
Sbjct: 123 MGPGVFSGLSALTLLDLRLNQIVLFLDGAFGELGSLQKLEVGDNHLVFVAPGAFAG--LA 180
Query: 189 HLDSLDLSNCHLKG-P---LSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLS 244
L +L L C+L P L+ + A +LR L + P A L+ L +L L
Sbjct: 181 KLSTLTLERCNLSTVPGLALARLPALVALRLRELDIGRLPAGA------LRGLGQLKELE 234
Query: 245 LRNC-GLSRLPANTFHRFTCLQELDISHNPLIDA-FTALLSPLESLEHLDMGYSNLQRIS 302
+ L L + L L I+ L F AL L L LD+ + + I
Sbjct: 235 IHLWPSLEALDPGSLVGLN-LSSLAITRCNLSSVPFQALYH-LSFLRVLDLSQNPISAIP 292
Query: 303 RSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPD 362
+ L+ L LSG L ++ + F LT +L++ + L L ET F PD
Sbjct: 293 ARRLSPLVRLQELRLSGACLTSIAAHAFHGLTAFHLLDVADNALQTLEETAFPS----PD 348
Query: 363 -LEELRLSGNPL 373
L LRLSGNPL
Sbjct: 349 KLVTLRLSGNPL 360
Score = 163 (62.4 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 80/276 (28%), Positives = 123/276 (44%)
Query: 81 PGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKL 140
PG PL + E L L+ L + L+ L+ L+LS N+L S ++ G L L
Sbjct: 55 PGGL-PLDT-ELLDLSGNRLWGLQQGMLSRLSLLQELDLSYNQL-STLEPGAFHG-LQSL 110
Query: 141 DTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHL 200
TL L+ + + + VF+ + L L+L N+++ L + G+ L L L++ + HL
Sbjct: 111 LTLRLQGNRLRIMGPGVFSGLSALTLLDLRLNQIV-LFLDGAFGE-LGSLQKLEVGDNHL 168
Query: 201 KGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHR 260
++ AF KL TL L LS +AL L L L LR + RLPA
Sbjct: 169 VF-VAPGAFAGLAKLSTLTLERCNLSTVP-GLALARLPALVALRLRELDIGRLPAGALRG 226
Query: 261 FTCLQELDISHNPLIDAFT-ALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSG 319
L+EL+I P ++A L L +L L + NL + ++ L+ L LS
Sbjct: 227 LGQLKELEIHLWPSLEALDPGSLVGL-NLSSLAITRCNLSSVPFQALYHLSFLRVLDLSQ 285
Query: 320 NKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFH 355
N + + + L L L L+ LT + FH
Sbjct: 286 NPISAIPARRLSPLVRLQELRLSGACLTSIAAHAFH 321
Score = 130 (50.8 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 83/304 (27%), Positives = 122/304 (40%)
Query: 133 VLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDS 192
+L L L LDL + +S L F L L L N L + G + + L
Sbjct: 79 MLSRLSLLQELDLSYNQLSTLEPGAFHGLQSLLTLRLQGNRLRIMGPGVFSGLSALTLLD 138
Query: 193 LDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSR 252
L L+ L + AF L+ L + N L A L KL L+L C LS
Sbjct: 139 LRLNQIVL---FLDGAFGELGSLQKLEVGDNHLVFVAPG-AFAGLAKLSTLTLERCNLST 194
Query: 253 LPANTFHRFTCL-----QELDISHNPLIDAFTALLSPLESLE-HLDMGYSNLQRISRSTF 306
+P R L +ELDI P A L L+ LE HL + +L+ + +
Sbjct: 195 VPGLALARLPALVALRLRELDIGRLPA-GALRGL-GQLKELEIHL---WPSLEALDPGSL 249
Query: 307 LKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEEL 366
+ + +L +L ++ L ++ FQ L HLS L + + ++ L+EL
Sbjct: 250 VGL-NLSSLAITRCNLSSVP---FQALYHLSFLRVLDLSQNPISAIPARRLSPLVRLQEL 305
Query: 367 RLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTYPD-LEELRLS 425
RLSG L S ++ + F L + +T+ + PD L LRLS
Sbjct: 306 RLSGACL----TSIAAHAFHGLTA-----FHLLDVADNALQTLEETAFPSPDKLVTLRLS 356
Query: 426 GNPL 429
GNPL
Sbjct: 357 GNPL 360
Score = 113 (44.8 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 31/98 (31%), Positives = 49/98 (50%)
Query: 29 IQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLT 88
++ ++ LV +L L + C LS + Q +L+ L LDLS NP+ I PL
Sbjct: 241 LEALDPGSLVGLNLSSLAITRCNLSSVPFQALYHLSFLRVLDLSQNPISAIPARRLSPLV 300
Query: 89 SLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKS 126
L+ L L+ LT I+ AF L L+++ N L++
Sbjct: 301 RLQELRLSGACLTSIAAHAFHGLTAFHLLDVADNALQT 338
Score = 113 (44.8 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 71/296 (23%), Positives = 109/296 (36%)
Query: 193 LDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSR 252
LDLS L G L + + L+ L LS N LS + A L L L L+ L
Sbjct: 65 LDLSGNRLWG-LQQGMLSRLSLLQELDLSYNQLSTLEPG-AFHGLQSLLTLRLQGNRLRI 122
Query: 253 LPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSL 312
+ F + L LD+ N ++ L SL+ L++G ++L ++ F + L
Sbjct: 123 MGPGVFSGLSALTLLDLRLNQIVLFLDGAFGELGSLQKLEVGDNHLVFVAPGAFAGLAKL 182
Query: 313 KTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNP 372
TL L L T+ L L L L + RL L+EL +
Sbjct: 183 STLTLERCNLSTVPGLALARLPALVALRLRELDIGRLPAGALRG---LGQLKELEI---- 235
Query: 373 LHVLPDSTKQYSMRTIPTQIWKNFDFLVILFI-LNETVFHENYTYPDLEELRLSGNPLHV 431
H+ P S + ++ + N L I L+ F Y L L LS NP+
Sbjct: 236 -HLWP-SLEALDPGSL---VGLNLSSLAITRCNLSSVPFQALYHLSFLRVLDLSQNPISA 290
Query: 432 LPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSF 487
+P C + + + F+ L++A+N L E +F
Sbjct: 291 IPA-RRLSPLVRLQELRLSGAC-LTSIAAHAFHGLTAFHLLDVADNALQTLEETAF 344
Score = 59 (25.8 bits), Expect = 4.0e-19, Sum P(2) = 4.0e-19
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 520 ITSIKLVGNPWKCDCNIADMWEWATREKGDIGV 552
+ +++L GNP CDC + +W R D G+
Sbjct: 350 LVTLRLSGNPLTCDCRL--LWLLRLRRHLDFGM 380
>MGI|MGI:1341817 [details] [associations]
symbol:Lgr5 "leucine rich repeat containing G protein
coupled receptor 5" species:10090 "Mus musculus" [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0004930 "G-protein
coupled receptor activity" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016500
"protein-hormone receptor activity" evidence=IEA] [GO:0048839
"inner ear development" evidence=IDA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS00237 PROSITE:PS50262 PROSITE:PS51450 MGI:MGI:1341817
GO:GO:0016021 GO:GO:0005886 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0048839 GO:GO:0016500 EMBL:CH466539
GeneTree:ENSGT00650000092962 HOVERGEN:HBG031675
HOGENOM:HOG000231829 CTD:8549 KO:K04308 OMA:FNPHFKE
OrthoDB:EOG46143B EMBL:AF110818 EMBL:AK132387 IPI:IPI00130319
PIR:JG0193 RefSeq:NP_034325.2 UniGene:Mm.42103
ProteinModelPortal:Q9Z1P4 SMR:Q9Z1P4 STRING:Q9Z1P4
PhosphoSite:Q9Z1P4 PRIDE:Q9Z1P4 DNASU:14160
Ensembl:ENSMUST00000020350 GeneID:14160 KEGG:mmu:14160
UCSC:uc007hbi.1 InParanoid:Q3V1L2 NextBio:285290 Bgee:Q9Z1P4
Genevestigator:Q9Z1P4 GermOnline:ENSMUSG00000020140 Uniprot:Q9Z1P4
Length = 907
Score = 263 (97.6 bits), Expect = 5.0e-19, P = 5.0e-19
Identities = 104/373 (27%), Positives = 168/373 (45%)
Query: 22 INLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIE 80
+ L N + + +GAF SL L +Q L ++ + NL +L L L N + +
Sbjct: 95 LRLAGNALTHIPKGAFTGLHSLKVLMLQNNQLRQVPEEALQNLRSLQSLRLDANHISYVP 154
Query: 81 PGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKL 140
P F L SL +L L+ LT + AF +L+ L+ + L+ NK+ D+ GNL L
Sbjct: 155 PSCFSGLHSLRHLWLDDNALTDVPVQAFRSLSALQAMTLALNKIHHIADYAF--GNLSSL 212
Query: 141 DTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHL 200
L L + I +L F L L+L N +LD T + L +L L + ++
Sbjct: 213 VVLHLHNNRIHSLGKKCFDGLHSLETLDLNYN---NLDEFPTAIKTLSNLKELGFHSNNI 269
Query: 201 KGPLSEDAFVNATKLRTLYLSGNPLSAADLSV-----ALKPLT----------------- 238
+ + E AFV L T++ NP+ +S L+ LT
Sbjct: 270 RS-IPERAFVGNPSLITIHFYDNPIQFVGVSAFQHLPELRTLTLNGASHITEFPHLTGTA 328
Query: 239 KLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNL 298
L L+L +S LP + LQ LD+S+N L D + LS + L+ +D+ ++ +
Sbjct: 329 TLESLTLTGAKISSLPQAVCDQLPNLQVLDLSYNLLEDLPS--LSGCQKLQKIDLRHNEI 386
Query: 299 QRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENY 358
I STF ++ +L++L L+ NK+ + F L L L+L++ L+ T H
Sbjct: 387 YEIKGSTFQQLFNLRSLNLAWNKIAIIHPNAFSTLPSLIKLDLSSNLLSSFPVTGLH--- 443
Query: 359 TYPDLEELRLSGN 371
L L+L+GN
Sbjct: 444 ---GLTHLKLTGN 453
Score = 205 (77.2 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 83/301 (27%), Positives = 134/301 (44%)
Query: 44 YLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYI 103
YL + +S++ L L +L L+GN L I G F L SL+ LML L +
Sbjct: 70 YLDLSMNNISQLPASLLHRLCFLEELRLAGNALTHIPKGAFTGLHSLKVLMLQNNQLRQV 129
Query: 104 SPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTW 163
A NL L++L L N + S++ + G L L L L + ++++P F + +
Sbjct: 130 PEEALQNLRSLQSLRLDANHI-SYVPPSCFSG-LHSLRHLWLDDNALTDVPVQAFRSLSA 187
Query: 164 LRNLNLAENELIDL-DVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSG 222
L+ + LA N++ + D A G NL L L L N + L + F L TL L+
Sbjct: 188 LQAMTLALNKIHHIADYA--FG-NLSSLVVLHLHNNRIHS-LGKKCFDGLHSLETLDLNY 243
Query: 223 NPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALL 282
N L + A+K L+ L L + + +P F L + NP+ +
Sbjct: 244 NNLD--EFPTAIKTLSNLKELGFHSNNIRSIPERAFVGNPSLITIHFYDNPIQFVGVSAF 301
Query: 283 SPLESLEHLDM-GYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLEL 341
L L L + G S++ T +L++L L+G K+ +L + L +L VL+L
Sbjct: 302 QHLPELRTLTLNGASHITEFPHLT--GTATLESLTLTGAKISSLPQAVCDQLPNLQVLDL 359
Query: 342 N 342
+
Sbjct: 360 S 360
Score = 153 (58.9 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 88/360 (24%), Positives = 146/360 (40%)
Query: 143 LDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKG 202
LDL + IS LP ++ +L L LA N L + G L L L L N L+
Sbjct: 71 LDLSMNNISQLPASLLHRLCFLEELRLAGNALTHIPKGAFTG--LHSLKVLMLQNNQLR- 127
Query: 203 PLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFT 262
+ E+A N L++L L N +S S L L L L + L+ +P F +
Sbjct: 128 QVPEEALQNLRSLQSLRLDANHISYVPPS-CFSGLHSLRHLWLDDNALTDVPVQAFRSLS 186
Query: 263 CLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKL 322
LQ + ++ N + L SL L + + + + + F + SL+TL L+ N L
Sbjct: 187 ALQAMTLALNKIHHIADYAFGNLSSLVVLHLHNNRIHSLGKKCFDGLHSLETLDLNYNNL 246
Query: 323 ETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQ 382
+ + + + L++L L ++ + + E F N P L + NP+ + S Q
Sbjct: 247 DEFPTAI-KTLSNLKELGFHSNNIRSIPERAFVGN---PSLITIHFYDNPIQFVGVSAFQ 302
Query: 383 Y--SMRTIPTQIWKN---FDFLVILFILNE-TVFHENYT---------YPDLEELRLSGN 427
+ +RT+ + F L L T+ + P+L+ L LS N
Sbjct: 303 HLPELRTLTLNGASHITEFPHLTGTATLESLTLTGAKISSLPQAVCDQLPNLQVLDLSYN 362
Query: 428 PLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSF 487
L LP+ + +I + + F N+ SLNLA N +++ +F
Sbjct: 363 LLEDLPSLSGCQKLQKIDLRHN----EIYEIKGSTFQQLFNLRSLNLAWNKIAIIHPNAF 418
Score = 137 (53.3 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 103/415 (24%), Positives = 172/415 (41%)
Query: 90 LEYLMLNRCNLTYISPSAF-DNLNHLKT-LELSQNKLKSHIDWTLVLGNLGKLDTLDLRQ 147
L+ ML R + + + S NL+ + L+LS N + S + +L L L L+ L L
Sbjct: 42 LDGRMLLRVDCSDLGLSELPSNLSVFTSYLDLSMNNI-SQLPASL-LHRLCFLEELRLAG 99
Query: 148 SGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSED 207
+ ++++P F L+ L L N+L V QNL L SL L H+ +
Sbjct: 100 NALTHIPKGAFTGLHSLKVLMLQNNQL--RQVPEEALQNLRSLQSLRLDANHISY-VPPS 156
Query: 208 AFVNATKLRTLYLSGNPLSAADLSV-----ALKPLT----KLHRLS------LRNCGLSR 252
F LR L+L N L+ + AL+ +T K+H ++ L + +
Sbjct: 157 CFSGLHSLRHLWLDDNALTDVPVQAFRSLSALQAMTLALNKIHHIADYAFGNLSSLVVLH 216
Query: 253 LPANTFHR-----FTCLQELD-ISHN-PLIDAFTALLSPLESLEHLDMGYSNLQRISRST 305
L N H F L L+ + N +D F + L +L+ L +N++ I
Sbjct: 217 LHNNRIHSLGKKCFDGLHSLETLDLNYNNLDEFPTAIKTLSNLKELGFHSNNIRSIPERA 276
Query: 306 FLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEE 365
F+ SL T+ N ++ + FQ+L L L LN G + + E H T LE
Sbjct: 277 FVGNPSLITIHFYDNPIQFVGVSAFQHLPELRTLTLN--GASHITEFP-HLTGT-ATLES 332
Query: 366 LRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTYPDLEELRLS 425
L L+G + LP + +P N L + + L E + + L+++ L
Sbjct: 333 LTLTGAKISSLPQAVCDQ----LP-----NLQVLDLSYNLLEDLPSLSGCQK-LQKIDLR 382
Query: 426 GNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNLS 480
N ++ + G+ KI + PN F+ ++ L+L++N LS
Sbjct: 383 HNEIYEIK-GSTFQQLFNLRSLNLAWN-KIAIIHPNAFSTLPSLIKLDLSSNLLS 435
Score = 127 (49.8 bits), Expect = 0.00028, P = 0.00028
Identities = 69/315 (21%), Positives = 119/315 (37%)
Query: 225 LSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSP 284
L ++L L T LS+ N +S+LPA+ HR L+EL ++ N L +
Sbjct: 55 LGLSELPSNLSVFTSYLDLSMNN--ISQLPASLLHRLCFLEELRLAGNALTHIPKGAFTG 112
Query: 285 LESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNC 344
L SL+ L + + L+++ + SL++L L N + + F L L L L++
Sbjct: 113 LHSLKVLMLQNNQLRQVPEEALQNLRSLQSLRLDANHISYVPPSCFSGLHSLRHLWLDDN 172
Query: 345 GLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFI 404
LT + F + L+ + L+ N +H + D Y+ + N LV+L +
Sbjct: 173 ALTDVPVQAFR---SLSALQAMTLALNKIHHIAD----YA--------FGNLSSLVVLHL 217
Query: 405 LNETVFHENYTYPD----LEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPP 460
N + D LE L L+ N L PT I +P
Sbjct: 218 HNNRIHSLGKKCFDGLHSLETLDLNYNNLDEFPTAIKTLSNLKELGFHSN---NIRSIPE 274
Query: 461 NVFNNTRNITSLNLANNNLSMTSELSFQFX-XXXXXXXXXXXXXXXXTHISPTVLRHNRA 519
F ++ +++ +N + +FQ H++ T +
Sbjct: 275 RAFVGNPSLITIHFYDNPIQFVGVSAFQHLPELRTLTLNGASHITEFPHLTGTATLESLT 334
Query: 520 ITSIKLVGNPWK-CD 533
+T K+ P CD
Sbjct: 335 LTGAKISSLPQAVCD 349
>UNIPROTKB|E1BG29 [details] [associations]
symbol:GP5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0010544 "negative regulation of platelet activation"
evidence=IEA] [GO:0007160 "cell-matrix adhesion" evidence=IEA]
[GO:0005518 "collagen binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007160
GO:GO:0010544 GeneTree:ENSGT00700000104286 OMA:AMIKIGQ
EMBL:DAAA02001732 EMBL:DAAA02001733 EMBL:DAAA02001734
EMBL:DAAA02001735 IPI:IPI00711271 Ensembl:ENSBTAT00000017571
NextBio:20873574 Uniprot:E1BG29
Length = 583
Score = 259 (96.2 bits), Expect = 5.7e-19, P = 5.7e-19
Identities = 100/355 (28%), Positives = 156/355 (43%)
Query: 19 LITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRI 78
L+ + + + I P G F L L + ++ + NL L +L L GN L+
Sbjct: 79 LLLSDSHVSAIAP--GTFNDPIKLKTLRLSRNKITHLPSALLDNLVLLEQLFLDGNELKS 136
Query: 79 IEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLG 138
++ +F L L+ L LN+ L ++ S F +L +LK L+LS N L +H+ L G
Sbjct: 137 LDQNLFQKLVHLQELFLNQNQLAFLPASLFTHLGNLKLLDLSGNNL-THLPEGL-FGVQV 194
Query: 139 KLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNC 198
KL L L + +++L + + L L L N L + L L SL LS
Sbjct: 195 KLQKLLLHSNRLASLESGLLDSLRALTELQLHTNHL--RSIVPGAFDRLRSLSSLTLSEN 252
Query: 199 HLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTF 258
L+ L F+++ L L LS NPL V + L L L++ L LPA F
Sbjct: 253 RLEF-LPSALFLHSHNLTFLTLSENPLEELP-KVLFGEIGGLRELRLKSTQLRTLPAAAF 310
Query: 259 HRFTCLQELDISHNPLIDAFTA-LLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLIL 317
T L+ L++S +P + A L L+ L + + L + + L+ + L
Sbjct: 311 RNLTGLRVLEVSLSPRLSALPEDAFRGLGELQVLALSSTGLASLPAGLLRGLCRLRHVSL 370
Query: 318 SGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNP 372
N+L L S LF+NL+ L ++L++ L L F P L + L NP
Sbjct: 371 RSNRLRALPSALFRNLSSLEEVQLDHNQLETLPGDAFE---ALPRLAGVLLGHNP 422
Score = 226 (84.6 bits), Expect = 2.4e-15, P = 2.4e-15
Identities = 96/322 (29%), Positives = 145/322 (45%)
Query: 60 FTNLTTLNKLDLSGNPLRIIEPGVF-DPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLE 118
F+++T L +L LS + + I PG F DP+ L+ L L+R +T++ + DNL L+ L
Sbjct: 70 FSDMTVLQRLLLSDSHVSAIAPGTFNDPI-KLKTLRLSRNKITHLPSALLDNLVLLEQLF 128
Query: 119 LSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLD 178
L N+LKS +D L L L L L Q+ ++ LP ++F + L+ L+L+ N L L
Sbjct: 129 LDGNELKS-LDQNL-FQKLVHLQELFLNQNQLAFLPASLFTHLGNLKLLDLSGNNLTHLP 186
Query: 179 VATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLT 238
G V L L L + L L + L L L N L + + A L
Sbjct: 187 EGL-FGVQ-VKLQKLLLHSNRLAS-LESGLLDSLRALTELQLHTNHLRSI-VPGAFDRLR 242
Query: 239 KLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNL 298
L L+L L LP+ F L L +S NPL + L + L L + + L
Sbjct: 243 SLSSLTLSENRLEFLPSALFLHSHNLTFLTLSENPLEELPKVLFGEIGGLRELRLKSTQL 302
Query: 299 QRISRSTFLKMTSLKTLILS-GNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHEN 357
+ + + F +T L+ L +S +L L F+ L L VL L++ GL L +
Sbjct: 303 RTLPAAAFRNLTGLRVLEVSLSPRLSALPEDAFRGLGELQVLALSSTGLASLPAGLLRGL 362
Query: 358 YTYPDLEELRLSGNPLHVLPDS 379
L + L N L LP +
Sbjct: 363 CR---LRHVSLRSNRLRALPSA 381
Score = 210 (79.0 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 99/383 (25%), Positives = 150/383 (39%)
Query: 190 LDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCG 249
L L LS+ H+ ++ F + KL+TL LS N ++ S L L L +L L
Sbjct: 76 LQRLLLSDSHVSA-IAPGTFNDPIKLKTLRLSRNKITHLP-SALLDNLVLLEQLFLDGNE 133
Query: 250 LSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKM 309
L L N F + LQEL ++ N L +L + L +L+ LD+ +NL + F
Sbjct: 134 LKSLDQNLFQKLVHLQELFLNQNQLAFLPASLFTHLGNLKLLDLSGNNLTHLPEGLFGVQ 193
Query: 310 TSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLS 369
L+ L+L N+L +LESGL +L L+ L+L+ L + F L L LS
Sbjct: 194 VKLQKLLLHSNRLASLESGLLDSLRALTELQLHTNHLRSIVPGAFDR---LRSLSSLTLS 250
Query: 370 GNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTYPDLEELRLSGNPL 429
N L LP + +S + +N L L + +F E L ELRL L
Sbjct: 251 ENRLEFLPSALFLHSHNLTFLTLSEN-----PLEELPKVLFGE---IGGLRELRLKSTQL 302
Query: 430 HVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNL-SMTS----- 483
LP ++ LP + F + L L++ L S+ +
Sbjct: 303 RTLPAA-AFRNLTGLRVLEVSLSPRLSALPEDAFRGLGELQVLALSSTGLASLPAGLLRG 361
Query: 484 --ELSFQFXXXXXXXXXXXXXXXXXTHISPTVLRHNR-------AITSI-KLVG-----N 528
L + + L HN+ A ++ +L G N
Sbjct: 362 LCRLRHVSLRSNRLRALPSALFRNLSSLEEVQLDHNQLETLPGDAFEALPRLAGVLLGHN 421
Query: 529 PWKCDCNIADMWEWATREKGDIG 551
PW+CDC + W R G +G
Sbjct: 422 PWRCDCGLGPFLAWLRRHAGLVG 444
Score = 146 (56.5 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 66/252 (26%), Positives = 110/252 (43%)
Query: 237 LTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYS 296
+T L RL L + +S + TF+ L+ L +S N + +ALL L LE L + +
Sbjct: 73 MTVLQRLLLSDSHVSAIAPGTFNDPIKLKTLRLSRNKITHLPSALLDNLVLLEQLFLDGN 132
Query: 297 NLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHE 356
L+ + ++ F K+ L+ L L+ N+L L + LF +L +L +L+L+ LT L E +F
Sbjct: 133 ELKSLDQNLFQKLVHLQELFLNQNQLAFLPASLFTHLGNLKLLDLSGNNLTHLPEGLFGV 192
Query: 357 NYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTY 416
L++L L N L L +S S+R + T++ + + L + F
Sbjct: 193 QVK---LQKLLLHSNRLASL-ESGLLDSLRAL-TELQLHTNHLRSIV---PGAFDR---L 241
Query: 417 PDLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLAN 476
L L LS N L LP+ ++ LP +F + L L +
Sbjct: 242 RSLSSLTLSENRLEFLPSALFLHSHNLTFLTLSEN--PLEELPKVLFGEIGGLRELRLKS 299
Query: 477 NNLSMTSELSFQ 488
L +F+
Sbjct: 300 TQLRTLPAAAFR 311
Score = 142 (55.0 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 62/250 (24%), Positives = 108/250 (43%)
Query: 238 TKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSN 297
T L + L G L N+F T LQ L +S + + + L+ L + +
Sbjct: 50 TNLTHILLFQMGRGTLQNNSFSDMTVLQRLLLSDSHVSAIAPGTFNDPIKLKTLRLSRNK 109
Query: 298 LQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHEN 357
+ + + + L+ L L GN+L++L+ LFQ L HL L LN L L ++F
Sbjct: 110 ITHLPSALLDNLVLLEQLFLDGNELKSLDQNLFQKLVHLQELFLNQNQLAFLPASLFTH- 168
Query: 358 YTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTYP 417
+L+ L LSGN L LP+ + ++ ++ + + L L E+ ++
Sbjct: 169 --LGNLKLLDLSGNNLTHLPEGL--FGVQVKLQKLLLHSNRLASL----ESGLLDSLRA- 219
Query: 418 DLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANN 477
L EL+L N L + G ++++LP +F ++ N+T L L+ N
Sbjct: 220 -LTELQLHTNHLRSIVPGAFDRLRSLSSLTLSEN--RLEFLPSALFLHSHNLTFLTLSEN 276
Query: 478 NLSMTSELSF 487
L ++ F
Sbjct: 277 PLEELPKVLF 286
>MGI|MGI:2441805 [details] [associations]
symbol:Lgr6 "leucine-rich repeat-containing G
protein-coupled receptor 6" species:10090 "Mus musculus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0004930 "G-protein coupled
receptor activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016500 "protein-hormone
receptor activity" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000276 InterPro:IPR002131 Pfam:PF00001 PRINTS:PR00237
PRINTS:PR00373 PROSITE:PS00237 PROSITE:PS50262 PROSITE:PS51450
MGI:MGI:2441805 GO:GO:0016021 GO:GO:0005886 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372 SMART:SM00013
GO:GO:0016500 HSSP:P21809 GeneTree:ENSGT00650000092962
HOVERGEN:HBG031675 HOGENOM:HOG000231829 CTD:59352 KO:K08399
OrthoDB:EOG4SQWW8 EMBL:AK137380 EMBL:BC026896 EMBL:AY255562
IPI:IPI00321212 RefSeq:NP_001028581.1 UniGene:Mm.279594
ProteinModelPortal:Q3UVD5 SMR:Q3UVD5 IntAct:Q3UVD5
PhosphoSite:Q3UVD5 PRIDE:Q3UVD5 Ensembl:ENSMUST00000044828
GeneID:329252 KEGG:mmu:329252 UCSC:uc007csq.1 InParanoid:Q3UVD5
OMA:AYGKAPS NextBio:398648 Bgee:Q3UVD5 Genevestigator:Q3UVD5
Uniprot:Q3UVD5
Length = 967
Score = 262 (97.3 bits), Expect = 7.1e-19, P = 7.1e-19
Identities = 89/324 (27%), Positives = 155/324 (47%)
Query: 17 PGLITINLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNP 75
P L ++ L+AN I V E +F SL +L++ + L++I + NL L + L+ N
Sbjct: 138 PSLQSLRLDANLISLVPERSFEGLSSLRHLWLDDNALTEIPVRALNNLPALQAMTLALNH 197
Query: 76 LRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLG 135
+R I F LTSL L L+ + ++ +F+ L++L+TL+L+ N+L+ ++ L +
Sbjct: 198 IRHIPDYAFQNLTSLVVLHLHNNRIQHVGTHSFEGLHNLETLDLNYNELQ---EFPLAIR 254
Query: 136 NLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDL 195
LG+L L + I +P+ F + L+ ++ +N + V + Q L L +L L
Sbjct: 255 TLGRLQELGFHNNNIKAIPEKAFMGSPLLQTIHFYDNPI--QFVGRSAFQYLSKLHTLSL 312
Query: 196 SNCHLKGPLSE-DAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLP 254
+ + E T L L L+ + V + L +L L L + + LP
Sbjct: 313 NGAT---DIQEFPDLKGTTSLEILTLTRAGIRLLPPGVC-QQLPRLRILELSHNQIEELP 368
Query: 255 ANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKT 314
+ HR L+E+ + HN + + S L SL+ LD+ ++ ++ I F + SL
Sbjct: 369 S--LHRCQKLEEIGLRHNRIKEIGADTFSQLGSLQALDLSWNAIRAIHPEAFSTLRSLVK 426
Query: 315 LILSGNKLETLESGLFQNLTHLSV 338
L L+ N+L TL L HL +
Sbjct: 427 LDLTDNQLTTLPLAGLGGLMHLKL 450
Score = 242 (90.2 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 99/353 (28%), Positives = 159/353 (45%)
Query: 22 INLNANPIQPVEG-AFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIE 80
+ L+ N + + G AF SL L +Q L I + L +L L L N + ++
Sbjct: 95 LRLSGNHLSHIPGQAFSGLHSLKILMLQSNQLRGIPAEALWELPSLQSLRLDANLISLVP 154
Query: 81 PGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKL 140
F+ L+SL +L L+ LT I A +NL L+ + L+ N ++ HI NL L
Sbjct: 155 ERSFEGLSSLRHLWLDDNALTEIPVRALNNLPALQAMTLALNHIR-HIP-DYAFQNLTSL 212
Query: 141 DTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVAT-TLGQNLVHLDSLDLSNCH 199
L L + I ++ + F L L+L NEL + +A TLG+ L L N +
Sbjct: 213 VVLHLHNNRIQHVGTHSFEGLHNLETLDLNYNELQEFPLAIRTLGR----LQELGFHNNN 268
Query: 200 LKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNC----------- 248
+K + E AF+ + L+T++ NP+ S A + L+KLH LSL
Sbjct: 269 IKA-IPEKAFMGSPLLQTIHFYDNPIQFVGRS-AFQYLSKLHTLSLNGATDIQEFPDLKG 326
Query: 249 ------------GLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYS 296
G+ LP + L+ L++SHN I+ +L + LE + + ++
Sbjct: 327 TTSLEILTLTRAGIRLLPPGVCQQLPRLRILELSHNQ-IEELPSL-HRCQKLEEIGLRHN 384
Query: 297 NLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRL 349
++ I TF ++ SL+ L LS N + + F L L L+L + LT L
Sbjct: 385 RIKEIGADTFSQLGSLQALDLSWNAIRAIHPEAFSTLRSLVKLDLTDNQLTTL 437
Score = 241 (89.9 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 101/313 (32%), Positives = 143/313 (45%)
Query: 69 LDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHI 128
LDLS N L ++PG+F L LE L L+ +L++I AF L+ LK L L N+L+ I
Sbjct: 71 LDLSMNNLTELQPGLFHHLRFLEELRLSGNHLSHIPGQAFSGLHSLKILMLQSNQLRG-I 129
Query: 129 DWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLV 188
L L L +L L + IS +P+ F + LR+L L +N L ++ V NL
Sbjct: 130 P-AEALWELPSLQSLRLDANLISLVPERSFEGLSSLRHLWLDDNALTEIPVRAL--NNLP 186
Query: 189 HLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNC 248
L ++ L+ H++ + + AF N T L L+L N + + + L L L L
Sbjct: 187 ALQAMTLALNHIRH-IPDYAFQNLTSLVVLHLHNNRIQHVGTH-SFEGLHNLETLDLNYN 244
Query: 249 GLSRLPANTFHRFTCLQELDISHNPLIDAFT--ALL-SPLESLEHLDMGYSN-LQRISRS 304
L P LQEL HN I A A + SPL H Y N +Q + RS
Sbjct: 245 ELQEFPL-AIRTLGRLQELGF-HNNNIKAIPEKAFMGSPLLQTIHF---YDNPIQFVGRS 299
Query: 305 TFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLE 364
F ++ L TL L+G + E + T L +L L G+ L V + P L
Sbjct: 300 AFQYLSKLHTLSLNG-ATDIQEFPDLKGTTSLEILTLTRAGIRLLPPGVCQQ---LPRLR 355
Query: 365 ELRLSGNPLHVLP 377
L LS N + LP
Sbjct: 356 ILELSHNQIEELP 368
Score = 204 (76.9 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 89/303 (29%), Positives = 133/303 (43%)
Query: 44 YLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYI 103
YL + L+++ P F +L L +L LSGN L I F L SL+ LML L I
Sbjct: 70 YLDLSMNNLTELQPGLFHHLRFLEELRLSGNHLSHIPGQAFSGLHSLKILMLQSNQLRGI 129
Query: 104 SPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTW 163
A L L++L L N L S + G L L L L + ++ +P N
Sbjct: 130 PAEALWELPSLQSLRLDAN-LISLVPERSFEG-LSSLRHLWLDDNALTEIPVRALNNLPA 187
Query: 164 LRNLNLAENELIDL-DVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSG 222
L+ + LA N + + D A QNL L L L N ++ + +F L TL L+
Sbjct: 188 LQAMTLALNHIRHIPDYAF---QNLTSLVVLHLHNNRIQH-VGTHSFEGLHNLETLDLNY 243
Query: 223 NPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALL 282
N L + +A++ L +L L N + +P F LQ + NP+ +
Sbjct: 244 NELQ--EFPLAIRTLGRLQELGFHNNNIKAIPEKAFMGSPLLQTIHFYDNPIQFVGRSAF 301
Query: 283 SPLESLEHLDM-GYSNLQRISRSTFLK-MTSLKTLILSGNKLETLESGLFQNLTHLSVLE 340
L L L + G +++Q LK TSL+ L L+ + L G+ Q L L +LE
Sbjct: 302 QYLSKLHTLSLNGATDIQEFPD---LKGTTSLEILTLTRAGIRLLPPGVCQQLPRLRILE 358
Query: 341 LNN 343
L++
Sbjct: 359 LSH 361
Score = 169 (64.5 bits), Expect = 8.7e-09, P = 8.7e-09
Identities = 98/364 (26%), Positives = 157/364 (43%)
Query: 20 ITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRII 79
+++N N +QP G F R L L + LS I Q F+ L +L L L N LR I
Sbjct: 73 LSMN-NLTELQP--GLFHHLRFLEELRLSGNHLSHIPGQAFSGLHSLKILMLQSNQLRGI 129
Query: 80 EPGVFDPLTSLEYLMLNRCNLTYISPS-AFDNLNHLKTLELSQNKLKSHIDWTLVLGNLG 138
L SL+ L L+ NL + P +F+ L+ L+ L L N L + I L NL
Sbjct: 130 PAEALWELPSLQSLRLD-ANLISLVPERSFEGLSSLRHLWLDDNAL-TEIP-VRALNNLP 186
Query: 139 KLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNC 198
L + L + I ++PD F N T L L+L N + V T + L +L++LDL+
Sbjct: 187 ALQAMTLALNHIRHIPDYAFQNLTSLVVLHLHNNRI--QHVGTHSFEGLHNLETLDLNYN 244
Query: 199 HLKG-PLSEDAFVNATKLRTLYLSGNPLSAADLSVAL-KPLTKLHRLSLRNCGLSRLPAN 256
L+ PL A +L+ L N + A + PL L + + + + +
Sbjct: 245 ELQEFPL---AIRTLGRLQELGFHNNNIKAIPEKAFMGSPL--LQTIHFYDNPIQFVGRS 299
Query: 257 TFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLI 316
F + L L ++ I F L SLE L + + ++ + ++ L+ L
Sbjct: 300 AFQYLSKLHTLSLNGATDIQEFPDLKGTT-SLEILTLTRAGIRLLPPGVCQQLPRLRILE 358
Query: 317 LSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVL 376
LS N++E L S L + L + + + F + L+ L LS N + +
Sbjct: 359 LSHNQIEELPS--LHRCQKLEEIGLRHNRIKEIGADTFSQ---LGSLQALDLSWNAIRAI 413
Query: 377 -PDS 379
P++
Sbjct: 414 HPEA 417
Score = 158 (60.7 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 80/313 (25%), Positives = 137/313 (43%)
Query: 138 GKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSN 197
G + + D + G+S +P ++ +L +L+ N L +L L +L L+ L LS
Sbjct: 45 GIMLSADCSELGLSVVPADLDPLTAYL---DLSMNNLTELQPG--LFHHLRFLEELRLSG 99
Query: 198 CHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANT 257
HL + AF L+ L L N L AL L L L L +S +P +
Sbjct: 100 NHLSH-IPGQAFSGLHSLKILMLQSNQLRGIPAE-ALWELPSLQSLRLDANLISLVPERS 157
Query: 258 FHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLIL 317
F + L+ L + N L + L+ L +L+ + + ++++ I F +TSL L L
Sbjct: 158 FEGLSSLRHLWLDDNALTEIPVRALNNLPALQAMTLALNHIRHIPDYAFQNLTSLVVLHL 217
Query: 318 SGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLP 377
N+++ + + F+ L +L L+LN L + T L+EL N + +P
Sbjct: 218 HNNRIQHVGTHSFEGLHNLETLDLNYNELQEFPLAI----RTLGRLQELGFHNNNIKAIP 273
Query: 378 DSTKQYS--MRTI-----PTQ-IWKN-FDFLVILFILNETVFHENYTYPDL------EEL 422
+ S ++TI P Q + ++ F +L L L+ + +PDL E L
Sbjct: 274 EKAFMGSPLLQTIHFYDNPIQFVGRSAFQYLSKLHTLSLNGATDIQEFPDLKGTTSLEIL 333
Query: 423 RLSGNPLHVLPTG 435
L+ + +LP G
Sbjct: 334 TLTRAGIRLLPPG 346
Score = 130 (50.8 bits), Expect = 0.00014, P = 0.00014
Identities = 64/206 (31%), Positives = 91/206 (44%)
Query: 14 LDNPGLITINLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLS 72
+ +P L TI+ NPIQ V AF L L + T + P T+L L L+
Sbjct: 278 MGSPLLQTIHFYDNPIQFVGRSAFQYLSKLHTLSLNGATDIQEFPDL-KGTTSLEILTLT 336
Query: 73 GNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTL 132
+R++ PGV L L L L+ + + PS L+ + L N++K T
Sbjct: 337 RAGIRLLPPGVCQQLPRLRILELSHNQIEEL-PS-LHRCQKLEEIGLRHNRIKEIGADTF 394
Query: 133 VLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDS 192
LG L LDL + I + F+ L L+L +N+L L +A LG L+HL
Sbjct: 395 --SQLGSLQALDLSWNAIRAIHPEAFSTLRSLVKLDLTDNQLTTLPLAG-LG-GLMHL-K 449
Query: 193 LDLSNCHLKGPLSEDAFVNATKLRTL 218
L N L S+D+F KLR L
Sbjct: 450 LK-GNLALSQAFSKDSF---PKLRIL 471
>UNIPROTKB|E1C2F8 [details] [associations]
symbol:LGR5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016500 "protein-hormone receptor activity" evidence=IEA]
[GO:0048839 "inner ear development" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 InterPro:IPR003591
SMART:SM00369 GO:GO:0016500 GeneTree:ENSGT00650000092962
OMA:FNPHFKE EMBL:AADN02009847 IPI:IPI00595522
Ensembl:ENSGALT00000016526 Uniprot:E1C2F8
Length = 834
Score = 261 (96.9 bits), Expect = 7.2e-19, P = 7.2e-19
Identities = 109/394 (27%), Positives = 175/394 (44%)
Query: 5 HPVYNDRRNLDNPGLITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLT 64
+PV+N R L+ L L P +GAF SL L +Q L ++ + NL
Sbjct: 10 NPVHN-LRFLEELRLAGNGLTYIP----KGAFAGLFSLKVLMLQNNQLRQVPTEALQNLR 64
Query: 65 TLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKL 124
+L L L N + + P F+ L SL +L L+ +LT I AF +L L+ + L+ NK+
Sbjct: 65 SLQSLRLDANHINYVPPNCFNGLVSLRHLWLDDNSLTEIPIQAFRSLPALQAMTLALNKI 124
Query: 125 KSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLG 184
D+ GNL L L L + I +L F L L+L N L + A
Sbjct: 125 HYIPDYAF--GNLSSLVVLHLHNNRIYSLGKKCFDGLHSLETLDLNYNSLDEFPTAI--- 179
Query: 185 QNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSV-----ALKPLT- 238
+ L +L L + ++K + E AFV L T++ NP+ S L+ LT
Sbjct: 180 RTLTNLKELGFHSNNIKS-IPERAFVGNPSLITIHFYDNPIQLVGKSAFQNLPELRTLTL 238
Query: 239 ----------------KLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALL 282
L L+L ++ LP + + LQ LD+S+N L D
Sbjct: 239 NGASQITEFPDLTGTTSLESLTLTGAQITSLPRSACDQLPNLQVLDLSYNLLEDL--PCF 296
Query: 283 SPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELN 342
+ + L+ +D+ ++ + I TF ++ SL++L L+ NK++ + F +L L L+++
Sbjct: 297 TACKKLQKIDLHHNEIDEIKADTFRQLASLRSLDLAWNKIKIIHPNAFSSLPSLIKLDVS 356
Query: 343 NCGLTRLNETVFHENYTYPDLEELRLSGNPLHVL 376
+ L+ T H L L+L+GN H L
Sbjct: 357 SNLLSSFPVTGLH------GLTHLKLTGN--HAL 382
Score = 169 (64.5 bits), Expect = 7.1e-09, P = 7.1e-09
Identities = 78/281 (27%), Positives = 122/281 (43%)
Query: 99 NLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVF 158
N+T + + NL L+ L L+ N L ++I G L L L L+ + + +P
Sbjct: 3 NITKLPSNPVHNLRFLEELRLAGNGL-TYIPKGAFAG-LFSLKVLMLQNNQLRQVPTEAL 60
Query: 159 ANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTL 218
N L++L L N I+ V LV L L L + L + AF + L+ +
Sbjct: 61 QNLRSLQSLRLDANH-INY-VPPNCFNGLVSLRHLWLDDNSLT-EIPIQAFRSLPALQAM 117
Query: 219 YLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAF 278
L+ N + A L+ L L L N + L F L+ LD+++N L D F
Sbjct: 118 TLALNKIHYIP-DYAFGNLSSLVVLHLHNNRIYSLGKKCFDGLHSLETLDLNYNSL-DEF 175
Query: 279 TALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSV 338
+ L +L+ L +N++ I F+ SL T+ N ++ + FQNL L
Sbjct: 176 PTAIRTLTNLKELGFHSNNIKSIPERAFVGNPSLITIHFYDNPIQLVGKSAFQNLPELRT 235
Query: 339 LELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDS 379
L LN G +++ E F + LE L L+G + LP S
Sbjct: 236 LTLN--GASQITE--FPDLTGTTSLESLTLTGAQITSLPRS 272
Score = 165 (63.1 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 85/358 (23%), Positives = 153/358 (42%)
Query: 136 NLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDL 195
NL L+ L L +G++ +P FA L+ L L N+L V T QNL L SL L
Sbjct: 14 NLRFLEELRLAGNGLTYIPKGAFAGLFSLKVLMLQNNQL--RQVPTEALQNLRSLQSLRL 71
Query: 196 SNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPA 255
H+ + + F LR L+L N L+ + A + L L ++L + +P
Sbjct: 72 DANHINY-VPPNCFNGLVSLRHLWLDDNSLTEIPIQ-AFRSLPALQAMTLALNKIHYIPD 129
Query: 256 NTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTL 315
F + L L + +N + L SLE LD+ Y++L + +T+LK L
Sbjct: 130 YAFGNLSSLVVLHLHNNRIYSLGKKCFDGLHSLETLDLNYNSLDEFP-TAIRTLTNLKEL 188
Query: 316 ILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSG-NPLH 374
N ++++ F L + + + + ++ F +N P+L L L+G + +
Sbjct: 189 GFHSNNIKSIPERAFVGNPSLITIHFYDNPIQLVGKSAF-QNL--PELRTLTLNGASQIT 245
Query: 375 VLPDSTKQYSMRTIP------TQIWKNF-DFLVILFILNETV-FHEN---YTY-PDLEEL 422
PD T S+ ++ T + ++ D L L +L+ + E+ +T L+++
Sbjct: 246 EFPDLTGTTSLESLTLTGAQITSLPRSACDQLPNLQVLDLSYNLLEDLPCFTACKKLQKI 305
Query: 423 RLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNLS 480
L N + + KI + PN F++ ++ L++++N LS
Sbjct: 306 DLHHNEIDEIKADTFRQLASLRSLDLAWNKIKI--IHPNAFSSLPSLIKLDVSSNLLS 361
Score = 145 (56.1 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 84/355 (23%), Positives = 142/355 (40%)
Query: 148 SGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSED 207
+ I+ LP N N +L L LA N L + G L L L L N L+ + +
Sbjct: 2 NNITKLPSNPVHNLRFLEELRLAGNGLTYIPKGAFAG--LFSLKVLMLQNNQLR-QVPTE 58
Query: 208 AFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQEL 267
A N L++L L N ++ + L L L L + L+ +P F LQ +
Sbjct: 59 ALQNLRSLQSLRLDANHINYVPPN-CFNGLVSLRHLWLDDNSLTEIPIQAFRSLPALQAM 117
Query: 268 DISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLES 327
++ N + L SL L + + + + + F + SL+TL L+ N L+ +
Sbjct: 118 TLALNKIHYIPDYAFGNLSSLVVLHLHNNRIYSLGKKCFDGLHSLETLDLNYNSLDEFPT 177
Query: 328 GLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQY--SM 385
+ + LT+L L ++ + + E F N P L + NP+ ++ S Q +
Sbjct: 178 AI-RTLTNLKELGFHSNNIKSIPERAFVGN---PSLITIHFYDNPIQLVGKSAFQNLPEL 233
Query: 386 RTIP----TQIWKNFDFLVILFILNETVFHENYT---------YPDLEELRLSGNPLHVL 432
RT+ +QI + D + + T+ T P+L+ L LS N L L
Sbjct: 234 RTLTLNGASQITEFPDLTGTTSLESLTLTGAQITSLPRSACDQLPNLQVLDLSYNLLEDL 293
Query: 433 PTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSF 487
P +ID + + F ++ SL+LA N + + +F
Sbjct: 294 PCFTACKKLQKIDLHHN----EIDEIKADTFRQLASLRSLDLAWNKIKIIHPNAF 344
Score = 131 (51.2 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 55/243 (22%), Positives = 101/243 (41%)
Query: 250 LSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKM 309
+++LP+N H L+EL ++ N L + L SL+ L + + L+++ +
Sbjct: 4 ITKLPSNPVHNLRFLEELRLAGNGLTYIPKGAFAGLFSLKVLMLQNNQLRQVPTEALQNL 63
Query: 310 TSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLS 369
SL++L L N + + F L L L L++ LT + F + P L+ + L+
Sbjct: 64 RSLQSLRLDANHINYVPPNCFNGLVSLRHLWLDDNSLTEIPIQAFR---SLPALQAMTLA 120
Query: 370 GNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTYPD----LEELRLS 425
N +H +PD Y+ + N LV+L + N ++ D LE L L+
Sbjct: 121 LNKIHYIPD----YA--------FGNLSSLVVLHLHNNRIYSLGKKCFDGLHSLETLDLN 168
Query: 426 GNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNLSMTSEL 485
N L PT I +P F ++ +++ +N + + +
Sbjct: 169 YNSLDEFPTAIRTLTNLKELGFHSN---NIKSIPERAFVGNPSLITIHFYDNPIQLVGKS 225
Query: 486 SFQ 488
+FQ
Sbjct: 226 AFQ 228
>UNIPROTKB|P0C6S8 [details] [associations]
symbol:LINGO3 "Leucine-rich repeat and immunoglobulin-like
domain-containing nogo receptor-interacting protein 3" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
eggNOG:NOG278536 HOGENOM:HOG000246971 HOVERGEN:HBG057546
EMBL:AC004152 IPI:IPI00376131 RefSeq:NP_001094861.1
UniGene:Hs.371587 ProteinModelPortal:P0C6S8 SMR:P0C6S8
PhosphoSite:P0C6S8 DMDM:182662399 PRIDE:P0C6S8
Ensembl:ENST00000404279 GeneID:645191 KEGG:hsa:645191
UCSC:uc010dsx.1 CTD:645191 GeneCards:GC19M002289 H-InvDB:HIX0202769
HGNC:HGNC:21206 MIM:609792 neXtProt:NX_P0C6S8 PharmGKB:PA162394097
InParanoid:P0C6S8 OMA:EIDNWPL OrthoDB:EOG4THVSV GenomeRNAi:645191
NextBio:117179 Bgee:P0C6S8 CleanEx:HS_LINGO3 Genevestigator:P0C6S8
Uniprot:P0C6S8
Length = 592
Score = 258 (95.9 bits), Expect = 7.6e-19, P = 7.6e-19
Identities = 93/306 (30%), Positives = 142/306 (46%)
Query: 69 LDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHI 128
L+LS N +R + PG L +LE L L+ + ++ P AF NL L+ L L N+LK +
Sbjct: 59 LELSRNRIRCLNPGDLAALPALEELDLSENAIAHVEPGAFANLPRLRVLRLRGNQLK--L 116
Query: 129 DWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLV 188
V L L LDL ++ + L D F + LR L + +N+L+ + G L+
Sbjct: 117 IPPGVFTRLDNLTLLDLSENKLVILLDYTFQDLHSLRRLEVGDNDLVFVSRRAFAG--LL 174
Query: 189 HLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVA-LKPLTKLHRLSLRN 247
L+ L L C+L LS ++ + L L L L+ A L + L L L + N
Sbjct: 175 ALEELTLERCNLTA-LSGESLGHLRSLGALRL--RHLAIASLEDQNFRRLPGLLHLEIDN 231
Query: 248 CGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFL 307
L A R L L ++H + A L L L++ ++ + + R +F
Sbjct: 232 WPLLEEVAAGSLRGLNLTSLSVTHTNITAVPAAALRHQAHLTCLNLSHNPISTVPRGSFR 291
Query: 308 KMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELR 367
+ L+ L L+G L +E F L + +L L+N L+ L E+ FH T LE LR
Sbjct: 292 DLVRLRELHLAGALLAVVEPQAFLGLRQIRLLNLSNNLLSTLEESTFHSVNT---LETLR 348
Query: 368 LSGNPL 373
+ GNPL
Sbjct: 349 VDGNPL 354
Score = 239 (89.2 bits), Expect = 9.4e-17, P = 9.4e-17
Identities = 86/290 (29%), Positives = 127/290 (43%)
Query: 55 INPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHL 114
+NP L L +LDLS N + +EPG F L L L L L I P F L++L
Sbjct: 69 LNPGDLAALPALEELDLSENAIAHVEPGAFANLPRLRVLRLRGNQLKLIPPGVFTRLDNL 128
Query: 115 KTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENEL 174
L+LS+NKL +D+T +L L L++ + + + FA L L L L
Sbjct: 129 TLLDLSENKLVILLDYTFQ--DLHSLRRLEVGDNDLVFVSRRAFAGLLALEELTLERCNL 186
Query: 175 IDLDVATTLGQNLVHLDSLD-LSNCHLK-GPLSEDAFVNATKLRTLYLSGNPLSAADLSV 232
L G++L HL SL L HL L + F L L + PL +
Sbjct: 187 TALS-----GESLGHLRSLGALRLRHLAIASLEDQNFRRLPGLLHLEIDNWPLLEEVAAG 241
Query: 233 ALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLD 292
+L+ L L LS+ + ++ +PA L L++SHNP+ L L L
Sbjct: 242 SLRGLN-LTSLSVTHTNITAVPAAALRHQAHLTCLNLSHNPISTVPRGSFRDLVRLRELH 300
Query: 293 MGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELN 342
+ + L + FL + ++ L LS N L TLE F ++ L L ++
Sbjct: 301 LAGALLAVVEPQAFLGLRQIRLLNLSNNLLSTLEESTFHSVNTLETLRVD 350
Score = 195 (73.7 bits), Expect = 6.2e-12, P = 6.2e-12
Identities = 93/313 (29%), Positives = 137/313 (43%)
Query: 22 INLNANPIQPVEGAFLVARSLLY-LYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIE 80
+ L+ N I+ + L A L L + E ++ + P F NL L L L GN L++I
Sbjct: 59 LELSRNRIRCLNPGDLAALPALEELDLSENAIAHVEPGAFANLPRLRVLRLRGNQLKLIP 118
Query: 81 PGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKL 140
PGVF L +L L L+ L + F +L+ L+ LE+ N L + G L L
Sbjct: 119 PGVFTRLDNLTLLDLSENKLVILLDYTFQDLHSLRRLEVGDNDLV-FVSRRAFAGLLA-L 176
Query: 141 DTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHL 200
+ L L + ++ L + LR+L L L +A+ QN L L HL
Sbjct: 177 EELTLERCNLTALSGESLGH---LRSLGALR--LRHLAIASLEDQNFRRLPGL----LHL 227
Query: 201 K---GPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKL-HRLSLRNCGLSRLPAN 256
+ PL E+ V A LR L L+ LS ++ P L H+ L LS P +
Sbjct: 228 EIDNWPLLEE--VAAGSLRGLNLTS--LSVTHTNITAVPAAALRHQAHLTCLNLSHNPIS 283
Query: 257 TFHR--FTCLQELDISHNPLIDAFTALLSP-----LESLEHLDMGYSNLQRISRSTFLKM 309
T R F L L H L A A++ P L + L++ + L + STF +
Sbjct: 284 TVPRGSFRDLVRLRELH--LAGALLAVVEPQAFLGLRQIRLLNLSNNLLSTLEESTFHSV 341
Query: 310 TSLKTLILSGNKL 322
+L+TL + GN L
Sbjct: 342 NTLETLRVDGNPL 354
Score = 161 (61.7 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 72/275 (26%), Positives = 108/275 (39%)
Query: 215 LRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPL 274
L L LS N ++ + A L +L L LR L +P F R L LD+S N L
Sbjct: 80 LEELDLSENAIAHVEPG-AFANLPRLRVLRLRGNQLKLIPPGVFTRLDNLTLLDLSENKL 138
Query: 275 IDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLT 334
+ L SL L++G ++L +SR F + +L+ L L L L +L
Sbjct: 139 VILLDYTFQDLHSLRRLEVGDNDLVFVSRRAFAGLLALEELTLERCNLTALSGESLGHLR 198
Query: 335 HLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPL--HVLPDSTKQYSMRTIPTQI 392
L L L + + L + F P L L + PL V S + ++ ++
Sbjct: 199 SLGALRLRHLAIASLEDQNFRR---LPGLLHLEIDNWPLLEEVAAGSLRGLNLTSLSVT- 254
Query: 393 WKNFDFLVILFILNETVFHENYTYPDLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXX 452
N I + + H+ + L L LS NP+ +P G+
Sbjct: 255 HTN-----ITAVPAAALRHQAH----LTCLNLSHNPISTVPRGSFRDLVRLRELHLAGAL 305
Query: 453 CKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSF 487
+ + P F R I LNL+NN LS E +F
Sbjct: 306 LAV--VEPQAFLGLRQIRLLNLSNNLLSTLEESTF 338
Score = 124 (48.7 bits), Expect = 0.00033, P = 0.00033
Identities = 53/192 (27%), Positives = 83/192 (43%)
Query: 35 AFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLM 94
AF +L L ++ C L+ ++ + +L +L L L + +E F L L +L
Sbjct: 169 AFAGLLALEELTLERCNLTALSGESLGHLRSLGALRLRHLAIASLEDQNFRRLPGLLHLE 228
Query: 95 LNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLP 154
++ N + A +L L LS L + L L+L + IS +P
Sbjct: 229 ID--NWPLLEEVAAGSLRGLNLTSLSVTHTNITAVPAAALRHQAHLTCLNLSHNPISTVP 286
Query: 155 DNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATK 214
F + LR L+LA L ++ LG + L L+LSN +L L E F +
Sbjct: 287 RGSFRDLVRLRELHLAGALLAVVEPQAFLGLRQIRL--LNLSN-NLLSTLEESTFHSVNT 343
Query: 215 LRTLYLSGNPLS 226
L TL + GNPL+
Sbjct: 344 LETLRVDGNPLA 355
>UNIPROTKB|E2RGS8 [details] [associations]
symbol:LGR6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016500 "protein-hormone receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002131 Pfam:PF00001 PRINTS:PR00373 PROSITE:PS51450
GO:GO:0016021 InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0016500
GeneTree:ENSGT00650000092962 CTD:59352 KO:K08399 OMA:AYGKAPS
EMBL:AAEX03004986 EMBL:AAEX03004981 EMBL:AAEX03004982
EMBL:AAEX03004983 EMBL:AAEX03004984 EMBL:AAEX03004985
RefSeq:XP_848875.1 Ensembl:ENSCAFT00000016729 GeneID:490231
KEGG:cfa:490231 NextBio:20863298 Uniprot:E2RGS8
Length = 965
Score = 261 (96.9 bits), Expect = 9.1e-19, P = 9.1e-19
Identities = 89/324 (27%), Positives = 157/324 (48%)
Query: 17 PGLITINLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNP 75
P L ++ L+AN I V E +F SL +L++ + L++I + NL L + L+ N
Sbjct: 136 PSLQSLRLDANLISLVPERSFEGLSSLRHLWLDDNALTEIPVRALNNLPALQAMTLALNR 195
Query: 76 LRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLG 135
+ I F LTSL L L+ + ++ +F+ L++L+TL+L+ N+L+ ++ + +
Sbjct: 196 ISHIPDYAFQNLTSLVVLHLHNNRIQHLGTHSFEGLHNLETLDLNYNELQ---EFPVAIR 252
Query: 136 NLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDL 195
LG+L L + I +P+ F N L+ ++ +N + V + Q+L L +L L
Sbjct: 253 TLGRLQELGFHNNNIKAIPEKAFMGNPLLQTIHFYDNPI--QCVGRSAFQDLPKLHTLSL 310
Query: 196 SNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPA 255
+ + + ++ TL +G L + + L +L L L + + LP+
Sbjct: 311 NGATDIQEFPDLKGTTSLEILTLTRAGIRLLPPGMC---QQLPRLRVLELSHNQIEELPS 367
Query: 256 NTFHRFTCLQELDISHNPLIDAFTA-LLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKT 314
HR L+E+ + HN I A A S L SL LD+ ++ ++ I F+ + SL
Sbjct: 368 --LHRCQKLEEIGLQHNR-IGAIGADTFSQLSSLRALDLSWNAIRSIHPEAFVTLRSLVK 424
Query: 315 LILSGNKLETLESGLFQNLTHLSV 338
L L+ N+L TL L HL +
Sbjct: 425 LDLTDNQLSTLPLAGLGGLMHLKL 448
Score = 243 (90.6 bits), Expect = 8.3e-17, P = 8.3e-17
Identities = 100/353 (28%), Positives = 158/353 (44%)
Query: 22 INLNANPIQPVEG-AFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIE 80
+ L+ N + + G AF SL L +Q L + L +L L L N + ++
Sbjct: 93 LRLSGNHLSHIPGHAFSGLYSLKILMLQNNQLGGVPADALWELPSLQSLRLDANLISLVP 152
Query: 81 PGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKL 140
F+ L+SL +L L+ LT I A +NL L+ + L+ N++ SHI NL L
Sbjct: 153 ERSFEGLSSLRHLWLDDNALTEIPVRALNNLPALQAMTLALNRI-SHIP-DYAFQNLTSL 210
Query: 141 DTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVAT-TLGQNLVHLDSLDLSNCH 199
L L + I +L + F L L+L NEL + VA TLG+ L L N +
Sbjct: 211 VVLHLHNNRIQHLGTHSFEGLHNLETLDLNYNELQEFPVAIRTLGR----LQELGFHNNN 266
Query: 200 LKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNC----------- 248
+K + E AF+ L+T++ NP+ S A + L KLH LSL
Sbjct: 267 IKA-IPEKAFMGNPLLQTIHFYDNPIQCVGRS-AFQDLPKLHTLSLNGATDIQEFPDLKG 324
Query: 249 ------------GLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYS 296
G+ LP + L+ L++SHN I+ +L + LE + + ++
Sbjct: 325 TTSLEILTLTRAGIRLLPPGMCQQLPRLRVLELSHNQ-IEELPSL-HRCQKLEEIGLQHN 382
Query: 297 NLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRL 349
+ I TF +++SL+ L LS N + ++ F L L L+L + L+ L
Sbjct: 383 RIGAIGADTFSQLSSLRALDLSWNAIRSIHPEAFVTLRSLVKLDLTDNQLSTL 435
Score = 219 (82.2 bits), Expect = 3.3e-14, P = 3.3e-14
Identities = 106/348 (30%), Positives = 150/348 (43%)
Query: 49 ECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAF 108
E LS + P+ LT LDLS N L ++PG+F L LE L L+ +L++I AF
Sbjct: 52 ELGLSAV-PRDLDPLTAY--LDLSMNNLTELQPGLFHHLRFLEELRLSGNHLSHIPGHAF 108
Query: 109 DNLNHLKTLELSQNKLKS-HIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNL 167
L LK L L N+L D L L L +L L + IS +P+ F + LR+L
Sbjct: 109 SGLYSLKILMLQNNQLGGVPAD---ALWELPSLQSLRLDANLISLVPERSFEGLSSLRHL 165
Query: 168 NLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSA 227
L +N L ++ V NL L ++ L+ + + + AF N T L L+L N +
Sbjct: 166 WLDDNALTEIPVRAL--NNLPALQAMTLALNRISH-IPDYAFQNLTSLVVLHLHNNRIQH 222
Query: 228 ADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFT--ALL-SP 284
+ + L L L L L P LQEL HN I A A + +P
Sbjct: 223 LGTH-SFEGLHNLETLDLNYNELQEFPV-AIRTLGRLQELGF-HNNNIKAIPEKAFMGNP 279
Query: 285 LESLEHLDMGYSN-LQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNN 343
L H Y N +Q + RS F + L TL L+G + E + T L +L L
Sbjct: 280 LLQTIHF---YDNPIQCVGRSAFQDLPKLHTLSLNG-ATDIQEFPDLKGTTSLEILTLTR 335
Query: 344 CGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQ 391
G+ L + + P L L LS N + LP + + I Q
Sbjct: 336 AGIRLLPPGMCQQ---LPRLRVLELSHNQIEELPSLHRCQKLEEIGLQ 380
Score = 217 (81.4 bits), Expect = 5.5e-14, P = 5.5e-14
Identities = 112/401 (27%), Positives = 169/401 (42%)
Query: 44 YLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYI 103
YL + L+++ P F +L L +L LSGN L I F L SL+ LML L +
Sbjct: 68 YLDLSMNNLTELQPGLFHHLRFLEELRLSGNHLSHIPGHAFSGLYSLKILMLQNNQLGGV 127
Query: 104 SPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTW 163
A L L++L L N L S + G L L L L + ++ +P N
Sbjct: 128 PADALWELPSLQSLRLDAN-LISLVPERSFEG-LSSLRHLWLDDNALTEIPVRALNNLPA 185
Query: 164 LRNLNLAENELIDL-DVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSG 222
L+ + LA N + + D A QNL L L L N ++ L +F L TL L+
Sbjct: 186 LQAMTLALNRISHIPDYAF---QNLTSLVVLHLHNNRIQH-LGTHSFEGLHNLETLDLNY 241
Query: 223 NPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALL 282
N L + VA++ L +L L N + +P F LQ + NP+ +
Sbjct: 242 NELQ--EFPVAIRTLGRLQELGFHNNNIKAIPEKAFMGNPLLQTIHFYDNPIQCVGRSAF 299
Query: 283 SPLESLEHLDM-GYSNLQRISRSTFLK-MTSLKTLILSGNKLETLESGLFQNLTHLSVLE 340
L L L + G +++Q LK TSL+ L L+ + L G+ Q L L VLE
Sbjct: 300 QDLPKLHTLSLNGATDIQEFPD---LKGTTSLEILTLTRAGIRLLPPGMCQQLPRLRVLE 356
Query: 341 LNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVL-PDSTKQYS-MRTIPTQIWKNFDF 398
L++ + L H LEE+ L N + + D+ Q S +R + W
Sbjct: 357 LSHNQIEELPS--LHR---CQKLEEIGLQHNRIGAIGADTFSQLSSLRALDLS-WNAIRS 410
Query: 399 L-VILFILNETVFHENYTYPDLEELRLSG--NPLHVLPTGN 436
+ F+ ++ + T L L L+G +H+ GN
Sbjct: 411 IHPEAFVTLRSLVKLDLTDNQLSTLPLAGLGGLMHLKLRGN 451
Score = 162 (62.1 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 68/246 (27%), Positives = 106/246 (43%)
Query: 138 GKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSN 197
G + + D + G+S +P ++ +L +L+ N L +L L +L L+ L LS
Sbjct: 43 GIMLSADCSELGLSAVPRDLDPLTAYL---DLSMNNLTELQPG--LFHHLRFLEELRLSG 97
Query: 198 CHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANT 257
HL + AF L+ L L N L AL L L L L +S +P +
Sbjct: 98 NHLSH-IPGHAFSGLYSLKILMLQNNQLGGVPAD-ALWELPSLQSLRLDANLISLVPERS 155
Query: 258 FHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLIL 317
F + L+ L + N L + L+ L +L+ + + + + I F +TSL L L
Sbjct: 156 FEGLSSLRHLWLDDNALTEIPVRALNNLPALQAMTLALNRISHIPDYAFQNLTSLVVLHL 215
Query: 318 SGNKLETLESGLFQNLTHLSVLELNNCGLT----------RLNETVFHENYTYPDLEELR 367
N+++ L + F+ L +L L+LN L RL E FH N + E
Sbjct: 216 HNNRIQHLGTHSFEGLHNLETLDLNYNELQEFPVAIRTLGRLQELGFHNN-NIKAIPEKA 274
Query: 368 LSGNPL 373
GNPL
Sbjct: 275 FMGNPL 280
>ZFIN|ZDB-GENE-040220-5 [details] [associations]
symbol:tlr22 "toll-like receptor 22" species:7955
"Danio rerio" [GO:0007165 "signal transduction" evidence=IEA]
[GO:0052033 "pathogen-associated molecular pattern dependent
induction by symbiont of host innate immune response" evidence=IDA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0009617 "response to bacterium"
evidence=IDA] Pfam:PF00560 InterPro:IPR000157 InterPro:IPR001611
Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450 SMART:SM00255
ZFIN:ZDB-GENE-040220-5 GO:GO:0016021 GO:GO:0007165 GO:GO:0009617
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005622 InterPro:IPR025875 Pfam:PF12799 GO:GO:0052033
InterPro:IPR026906 Pfam:PF13306 SUPFAM:SSF52200 EMBL:BC163527
IPI:IPI00898178 RefSeq:NP_001122147.1 UniGene:Dr.30190
ProteinModelPortal:B3DJL6 STRING:B3DJL6 GeneID:403135
KEGG:dre:403135 CTD:403135 HOVERGEN:HBG055859 NextBio:20816896
Uniprot:B3DJL6
Length = 947
Score = 253 (94.1 bits), Expect = 6.6e-18, P = 6.6e-18
Identities = 99/335 (29%), Positives = 152/335 (45%)
Query: 22 INLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEP 81
+ L N + V +F + SL ++ + + K++ F NLT + L L N + I
Sbjct: 358 LQLQINKLTRVTNSFQILTSLEFIDLSRNHIHKLSCNDFANLTQVKTLYLYSNKISSIRS 417
Query: 82 GVFDPLTSLEYLMLNRCNLTYISPSAFDNLNH-LKTLELSQNKL---KSHIDWTLVLGNL 137
+F L SLE L L NL I F N + LK L+LS NKL KSH GNL
Sbjct: 418 CLFKDLKSLEVLRLGTNNLLKID-DVFSNGPYFLKELQLSYNKLSLIKSH-----TFGNL 471
Query: 138 GKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVAT--TLGQNLVHLDSLDL 195
+L+ L L + IS + F L +L L+ N++ + T + + +L +LDL
Sbjct: 472 PQLNNLSLEDNQISEIEGYAFGGLENLTSLFLSSNKITGKTLTTHPNVFSGMPNLQNLDL 531
Query: 196 ---SNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADL-SVALKPLTKLHRLSLRNCGLS 251
S L F + LR L L L S L+ L+ L + N L+
Sbjct: 532 FANSISFAYDKLKYPLFKDLKNLRELSLYSQRRGIGQLPSNLLEGLSSLQMFYIGNTNLN 591
Query: 252 RLPANTFHRFTCLQELDISHNPLI--DAFTA-LLSPLESLEHLDMGYSNLQRISRSTFLK 308
+L N F+ L LD+S N L DA L P+ +L L + + L+ ++
Sbjct: 592 QLNPNLFNFTPQLWFLDLSKNALREDDAIPPELFHPIPNLTKLIISRTQLRSLNFLLGAN 651
Query: 309 MTSLKTLILSGNKLETLESGLFQNLTHLSVLELNN 343
+ L TL SGN+++++ L ++L L+VL+L N
Sbjct: 652 LNKLSTLRASGNEIDSVNETLIKSLPRLAVLDLQN 686
Score = 227 (85.0 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
Identities = 118/474 (24%), Positives = 205/474 (43%)
Query: 15 DNPGLITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGN 74
+N ++ I+ N+ +E ++ +L YL + +SKI F +L L L+L+ N
Sbjct: 58 NNTWILDISFNSFAQIQIEDLNILL-NLQYLNVSNNKISKIQDGAFGSLFNLTDLNLASN 116
Query: 75 PLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTL-V 133
L + G+ LT+L L L+R ++ I SAF L+ L+ L LS+N L+ HID V
Sbjct: 117 RLNAVSNGMLRGLTNLLVLRLDRNYISVIKESAFSTLHSLQVLNLSKNHLR-HIDDVKPV 175
Query: 134 LGNLGKLDTLDLRQSGISNLPDNVFANNTW-LRNLNLAENELIDLDVATTLGQNLVHLDS 192
L +L L+ L + + + + + L+ L+L+ N + + L HLD
Sbjct: 176 LASL-YLEELYIGSNYFNVFNSSELSTKPLSLKRLDLSNNRFAAFQLTNNIFPTLNHLD- 233
Query: 193 LDLSNCHLKGPLSEDAFVNA--TKLRTLYLSGNPLSAADLSVALKPLTK-LHRLSLRNCG 249
LS C G ++ + + ++TLY +S L+ L+++ L G
Sbjct: 234 --LSYCGHNGTMAWNVTEKSYLASVKTLYFMDVNMSIQTADNVLQSFNNTLNKIRLN--G 289
Query: 250 LSRLPANTFHRFTC---LQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTF 306
RL + C L+ L + + + P L LD+G + + +S+S F
Sbjct: 290 NVRLNKTSLLLSVCSPMLRVLRLIATKIKHLTNHMFDPCSELSELDLGGNEISNLSQSMF 349
Query: 307 LKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEEL 366
LK L L NKL T + FQ LT L ++L+ + +L+ F N T ++ L
Sbjct: 350 RGFKQLKKLQLQINKL-TRVTNSFQILTSLEFIDLSRNHIHKLSCNDF-ANLT--QVKTL 405
Query: 367 RLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTYPDLEELRLSG 426
L N + + + ++++ + L I + VF N Y L+EL+LS
Sbjct: 406 YLYSNKISSIRSCLFK-DLKSLEVLRLGTNNLLKI-----DDVF-SNGPY-FLKELQLSY 457
Query: 427 NPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNLS 480
N L ++ + +I + F N+TSL L++N ++
Sbjct: 458 NKLSLIKSHTFGNLPQLNNLSLEDN--QISEIEGYAFGGLENLTSLFLSSNKIT 509
Score = 204 (76.9 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 104/377 (27%), Positives = 167/377 (44%)
Query: 66 LNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLK 125
L L L ++ + +FDP + L L L ++ +S S F LK L+L NKL
Sbjct: 307 LRVLRLIATKIKHLTNHMFDPCSELSELDLGGNEISNLSQSMFRGFKQLKKLQLQINKL- 365
Query: 126 SHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQ 185
+ + + + L L+ +DL ++ I L N FAN T ++ L L N++ + + L +
Sbjct: 366 TRVTNSFQI--LTSLEFIDLSRNHIHKLSCNDFANLTQVKTLYLYSNKISS--IRSCLFK 421
Query: 186 NLVHLDSLDL-SNCHLKGPLSEDAFVNATK-LRTLYLSGNPLSAADLSVALKPLTKLHRL 243
+L L+ L L +N LK +D F N L+ L LS N LS S L +L+ L
Sbjct: 422 DLKSLEVLRLGTNNLLK---IDDVFSNGPYFLKELQLSYNKLSLIK-SHTFGNLPQLNNL 477
Query: 244 SLRNCGLSRLPANTFHRFTCLQELDISHNPL----IDAFTALLSPLESLEHLDMGYSNLQ 299
SL + +S + F L L +S N + + + S + +L++LD+ +++
Sbjct: 478 SLEDNQISEIEGYAFGGLENLTSLFLSSNKITGKTLTTHPNVFSGMPNLQNLDLFANSIS 537
Query: 300 ----RISRSTFLKMTSLKTLILSGNK--LETLESGLFQNLTHLSVLELNNCGLTRLNETV 353
++ F + +L+ L L + + L S L + L+ L + + N L +LN +
Sbjct: 538 FAYDKLKYPLFKDLKNLRELSLYSQRRGIGQLPSNLLEGLSSLQMFYIGNTNLNQLNPNL 597
Query: 354 FHENYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFI-LNETVFHE 412
F N+T P L L LS N L D+ IP N L+I L F
Sbjct: 598 F--NFT-PQLWFLDLSKNALRE-DDAIPPELFHPIP-----NLTKLIISRTQLRSLNFLL 648
Query: 413 NYTYPDLEELRLSGNPL 429
L LR SGN +
Sbjct: 649 GANLNKLSTLRASGNEI 665
Score = 171 (65.3 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 122/483 (25%), Positives = 198/483 (40%)
Query: 19 LITINLNANPIQPVEGAFLVARSLLY--LYMQECTLSKINP-QFFTNLTTLNKLDLSGNP 75
L +NL+ N ++ ++ V SL LY+ + N + T +L +LDLS N
Sbjct: 156 LQVLNLSKNHLRHIDDVKPVLASLYLEELYIGSNYFNVFNSSELSTKPLSLKRLDLSNNR 215
Query: 76 LRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLG 135
+ LT+ + LN +L+Y + N + L+ K +D + +
Sbjct: 216 FAAFQ------LTNNIFPTLNHLDLSYCGHNGTMAWNVTEKSYLASVKTLYFMDVNMSIQ 269
Query: 136 NLGK-LDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVH----- 189
L + + + I L NV N T L L++ L L + T ++L +
Sbjct: 270 TADNVLQSFNNTLNKI-RLNGNVRLNKTSLL-LSVCSPMLRVLRLIATKIKHLTNHMFDP 327
Query: 190 ---LDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLR 246
L LDL + LS+ F +L+ L L N L+ S + LT L + L
Sbjct: 328 CSELSELDLGGNEISN-LSQSMFRGFKQLKKLQLQINKLTRVTNSFQI--LTSLEFIDLS 384
Query: 247 NCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTF 306
+ +L N F T ++ L + N + + L L+SLE L +G +NL +I
Sbjct: 385 RNHIHKLSCNDFANLTQVKTLYLYSNKISSIRSCLFKDLKSLEVLRLGTNNLLKIDDVFS 444
Query: 307 LKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFH--ENYTYPDLE 364
LK L LS NKL ++S F NL L+ L L + ++ + F EN T L
Sbjct: 445 NGPYFLKELQLSYNKLSLIKSHTFGNLPQLNNLSLEDNQISEIEGYAFGGLENLTSLFLS 504
Query: 365 ELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTYP---DLEE 421
+++G L P+ +S +P +N D LF + + ++ YP DL+
Sbjct: 505 SNKITGKTLTTHPNV---FS--GMPNL--QNLD----LFANSISFAYDKLKYPLFKDLKN 553
Query: 422 LR-LS----GNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLAN 476
LR LS + LP+ ++ L PN+FN T + L+L+
Sbjct: 554 LRELSLYSQRRGIGQLPSN--LLEGLSSLQMFYIGNTNLNQLNPNLFNFTPQLWFLDLSK 611
Query: 477 NNL 479
N L
Sbjct: 612 NAL 614
Score = 128 (50.1 bits), Expect = 0.00023, P = 0.00023
Identities = 83/313 (26%), Positives = 126/313 (40%)
Query: 22 INLNANPIQPV---EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRI 78
I+L+ N I + + A L LYLY + +S I F +L +L L L N L
Sbjct: 381 IDLSRNHIHKLSCNDFANLTQVKTLYLYSNK--ISSIRSCLFKDLKSLEVLRLGTNNLLK 438
Query: 79 IEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLG 138
I+ + L+ L L+ L+ I F NL L L L N++ S I+ G L
Sbjct: 439 IDDVFSNGPYFLKELQLSYNKLSLIKSHTFGNLPQLNNLSLEDNQI-SEIEG-YAFGGLE 496
Query: 139 KLDTLDLRQSGISNLP----DNVFANNTWLRNLNLAENEL-IDLD-VATTLGQNLVHLDS 192
L +L L + I+ NVF+ L+NL+L N + D + L ++L +L
Sbjct: 497 NLTSLFLSSNKITGKTLTTHPNVFSGMPNLQNLDLFANSISFAYDKLKYPLFKDLKNLRE 556
Query: 193 LDL-SNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLT-KLHRLSLRNCGL 250
L L S G L + + L+ Y+ L+ L+ L T +L L L L
Sbjct: 557 LSLYSQRRGIGQLPSNLLEGLSSLQMFYIGNTNLN--QLNPNLFNFTPQLWFLDLSKNAL 614
Query: 251 SR---LPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFL 307
+P FH L +L IS L L + L L L + + ++ +
Sbjct: 615 REDDAIPPELFHPIPNLTKLIISRTQLRSLNFLLGANLNKLSTLRASGNEIDSVNETLIK 674
Query: 308 KMTSLKTLILSGN 320
+ L L L N
Sbjct: 675 SLPRLAVLDLQNN 687
Score = 127 (49.8 bits), Expect = 8.8e-08, Sum P(2) = 8.8e-08
Identities = 121/498 (24%), Positives = 195/498 (39%)
Query: 12 RNLDNPGLITINLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINP--QFFTNLTTLNK 68
R L N L+ + L+ N I + E AF SL L + + L I+ +L L +
Sbjct: 127 RGLTN--LLVLRLDRNYISVIKESAFSTLHSLQVLNLSKNHLRHIDDVKPVLASLY-LEE 183
Query: 69 LDLSGNPLRIIEPGVFD--PLTSLEYLML--NRCNLTYISPSAFDNLNHLKTLELSQNKL 124
L + N + PL SL+ L L NR ++ + F LNHL +LS
Sbjct: 184 LYIGSNYFNVFNSSELSTKPL-SLKRLDLSNNRFAAFQLTNNIFPTLNHL---DLSYCGH 239
Query: 125 KSHIDWTLVLGN-LGKLDTLDLRQSGIS-NLPDNVFA--NNTWLRNLNLAENELIDLDVA 180
+ W + + L + TL +S DNV NNT L + L N ++ +
Sbjct: 240 NGTMAWNVTEKSYLASVKTLYFMDVNMSIQTADNVLQSFNNT-LNKIRLNGNVRLN-KTS 297
Query: 181 TTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKL 240
L L L L +K L+ F ++L L L GN +S S+ + +L
Sbjct: 298 LLLSVCSPMLRVLRLIATKIKH-LTNHMFDPCSELSELDLGGNEISNLSQSM-FRGFKQL 355
Query: 241 HRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSN-LQ 299
+L L+ L+R+ N+F T L+ +D+S N + + L ++ L + YSN +
Sbjct: 356 KKLQLQINKLTRV-TNSFQILTSLEFIDLSRNHIHKLSCNDFANLTQVKTLYL-YSNKIS 413
Query: 300 RISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTH-LSVLELNNCGLTRLNETVFHENY 358
I F + SL+ L L N L ++ +F N + L L+L+ L+ + F
Sbjct: 414 SIRSCLFKDLKSLEVLRLGTNNLLKIDD-VFSNGPYFLKELQLSYNKLSLIKSHTFGN-- 470
Query: 359 TYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVF-HENYT-- 415
P L L L N + + + + + T + FL I +T+ H N
Sbjct: 471 -LPQLNNLSLEDNQISEI-EGYAFGGLENL-TSL-----FLSSNKITGKTLTTHPNVFSG 522
Query: 416 YPDLEELRLSGNPLHV----LPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITS 471
P+L+ L L N + L I LP N+ ++
Sbjct: 523 MPNLQNLDLFANSISFAYDKLKYPLFKDLKNLRELSLYSQRRGIGQLPSNLLEGLSSLQM 582
Query: 472 LNLANNNLSMTSELSFQF 489
+ N NL+ + F F
Sbjct: 583 FYIGNTNLNQLNPNLFNF 600
Score = 83 (34.3 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
Identities = 20/92 (21%), Positives = 38/92 (41%)
Query: 456 DYLPPNVFNNTRNITSLNLANNNLSMTSELSFQFXXXXXXXXXXXXXXXXXTHISPTVLR 515
D +PP +F+ N+T L ++ L L+F ++ T+++
Sbjct: 618 DAIPPELFHPIPNLTKLIISRTQLR---SLNFLLGANLNKLSTLRASGNEIDSVNETLIK 674
Query: 516 HNRAITSIKLVGNPWKCDCNIADMWEWATREK 547
+ + L N + CDCN A +WA + +
Sbjct: 675 SLPRLAVLDLQNNTFTCDCNNAFFIDWAKKNE 706
>MGI|MGI:2442298 [details] [associations]
symbol:Lingo2 "leucine rich repeat and Ig domain containing
2" species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 MGI:MGI:2442298 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 InterPro:IPR025875 Pfam:PF12799
HSSP:Q15772 eggNOG:NOG278536 GeneTree:ENSGT00690000101682
HOGENOM:HOG000246971 HOVERGEN:HBG057546 CTD:158038 OMA:DQDSGMY
OrthoDB:EOG4NS3B7 EMBL:AK035778 EMBL:AK045639 EMBL:AK141568
EMBL:BC090619 EMBL:BC145692 IPI:IPI00341267 RefSeq:NP_001159471.1
RefSeq:NP_001159472.1 RefSeq:NP_001159473.1 RefSeq:NP_780725.2
UniGene:Mm.132507 ProteinModelPortal:Q3URE9 SMR:Q3URE9
PhosphoSite:Q3URE9 PaxDb:Q3URE9 PRIDE:Q3URE9
Ensembl:ENSMUST00000065173 Ensembl:ENSMUST00000098151
Ensembl:ENSMUST00000108122 Ensembl:ENSMUST00000108124
Ensembl:ENSMUST00000164772 GeneID:242384 KEGG:mmu:242384
InParanoid:Q3URE9 NextBio:385317 Bgee:Q3URE9 CleanEx:MM_LINGO2
Genevestigator:Q3URE9 Uniprot:Q3URE9
Length = 606
Score = 255 (94.8 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 84/292 (28%), Positives = 139/292 (47%)
Query: 52 LSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNL 111
L INP+ F + L ++DLS N + +EPG F+ L +L L L L + F L
Sbjct: 69 LKSINPEEFISYPLLEEIDLSDNIIANVEPGAFNNLFNLRSLRLKGNRLKLVPLGVFTGL 128
Query: 112 NHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAE 171
++L L++S+NK+ +D+ + +L L +L++ + + + F+ L L L +
Sbjct: 129 SNLTKLDISENKIVILLDY--MFQDLHNLKSLEVGDNDLVYISHRAFSGLLSLEQLTLEK 186
Query: 172 NELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLS 231
L V T +L L +L L + ++ + AF L+ L + PL +
Sbjct: 187 CNLTA--VPTEALSHLRSLIALHLKHLNINN-MPVYAFKRLFHLKNLEIDYWPLLDLMPA 243
Query: 232 VALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHL 291
+L L L LS+ N LS +P F L L++S+NP+ + S L L+ L
Sbjct: 244 NSLYGLN-LTSLSITNTNLSTVPFLAFKHLVYLTHLNLSYNPISTIEAGMFSDLIRLQEL 302
Query: 292 DMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNN 343
+ + L+ I +F + L+ L +S N LETLE +F + L VL +NN
Sbjct: 303 HIVGAQLRTIEPHSFQGLRFLRVLNVSQNLLETLEENVFSSPRALEVLSINN 354
Score = 247 (92.0 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 94/307 (30%), Positives = 145/307 (47%)
Query: 69 LDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHI 128
LDLS N L+ I P F LE + L+ + + P AF+NL +L++L L N+LK +
Sbjct: 62 LDLSKNRLKSINPEEFISYPLLEEIDLSDNIIANVEPGAFNNLFNLRSLRLKGNRLKL-V 120
Query: 129 DWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLV 188
+ G L L LD+ ++ I L D +F + L++L + +N+L+ + G L+
Sbjct: 121 PLGVFTG-LSNLTKLDISENKIVILLDYMFQDLHNLKSLEVGDNDLVYISHRAFSG--LL 177
Query: 189 HLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSV-ALKPLTKLHRLSLRN 247
L+ L L C+L +E A + L L+L L+ ++ V A K L L L +
Sbjct: 178 SLEQLTLEKCNLTAVPTE-ALSHLRSLIALHLKH--LNINNMPVYAFKRLFHLKNLEIDY 234
Query: 248 CGLSRL-PANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTF 306
L L PAN+ + L L I++ L L L HL++ Y+ + I F
Sbjct: 235 WPLLDLMPANSLYGLN-LTSLSITNTNLSTVPFLAFKHLVYLTHLNLSYNPISTIEAGMF 293
Query: 307 LKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEEL 366
+ L+ L + G +L T+E FQ L L VL ++ L L E VF LE L
Sbjct: 294 SDLIRLQELHIVGAQLRTIEPHSFQGLRFLRVLNVSQNLLETLEENVFSSPRA---LEVL 350
Query: 367 RLSGNPL 373
++ NPL
Sbjct: 351 SINNNPL 357
Score = 214 (80.4 bits), Expect = 5.4e-14, P = 5.4e-14
Identities = 90/293 (30%), Positives = 137/293 (46%)
Query: 9 NDRRNLDNPGLITINLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLN 67
N + P L I+L+ N I VE GAF +L L ++ L + FT L+ L
Sbjct: 73 NPEEFISYPLLEEIDLSDNIIANVEPGAFNNLFNLRSLRLKGNRLKLVPLGVFTGLSNLT 132
Query: 68 KLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSH 127
KLD+S N + I+ +F L +L+ L + +L YIS AF L L+ L L + L +
Sbjct: 133 KLDISENKIVILLDYMFQDLHNLKSLEVGDNDLVYISHRAFSGLLSLEQLTLEKCNLTA- 191
Query: 128 IDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTL-GQN 186
+ T L +L L L L+ I+N+P F L+NL + L+DL A +L G N
Sbjct: 192 VP-TEALSHLRSLIALHLKHLNINNMPVYAFKRLFHLKNLEIDYWPLLDLMPANSLYGLN 250
Query: 187 LVHLDSLDLSNCHLKG-PLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSL 245
L SL ++N +L P AF + L L LS NP+S + + L +L L +
Sbjct: 251 LT---SLSITNTNLSTVPFL--AFKHLVYLTHLNLSYNPISTIEAGM-FSDLIRLQELHI 304
Query: 246 RNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNL 298
L + ++F L+ L++S N L + S +LE L + + L
Sbjct: 305 VGAQLRTIEPHSFQGLRFLRVLNVSQNLLETLEENVFSSPRALEVLSINNNPL 357
Score = 157 (60.3 bits), Expect = 9.0e-08, P = 9.0e-08
Identities = 70/295 (23%), Positives = 119/295 (40%)
Query: 193 LDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSR 252
LDLS LK ++ + F++ L + LS N ++ + A L L L L+ L
Sbjct: 62 LDLSKNRLKS-INPEEFISYPLLEEIDLSDNIIANVEPG-AFNNLFNLRSLRLKGNRLKL 119
Query: 253 LPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSL 312
+P F + L +LDIS N ++ + L +L+ L++G ++L IS F + SL
Sbjct: 120 VPLGVFTGLSNLTKLDISENKIVILLDYMFQDLHNLKSLEVGDNDLVYISHRAFSGLLSL 179
Query: 313 KTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNP 372
+ L L L + + +L L L L + + + F + L+ L + P
Sbjct: 180 EQLTLEKCNLTAVPTEALSHLRSLIALHLKHLNINNMPVYAFKRLF---HLKNLEIDYWP 236
Query: 373 LHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTYPDLEELRLSGNPLHVL 432
L L + Y + I N + + F+ F ++ Y L L LS NP+ +
Sbjct: 237 LLDLMPANSLYGLNLTSLSI-TNTNLSTVPFL----AF-KHLVY--LTHLNLSYNPISTI 288
Query: 433 PTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSF 487
G ++ + P+ F R + LN++ N L E F
Sbjct: 289 EAG--MFSDLIRLQELHIVGAQLRTIEPHSFQGLRFLRVLNVSQNLLETLEENVF 341
Score = 153 (58.9 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 70/268 (26%), Positives = 121/268 (45%)
Query: 115 KTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAEN-- 172
K L+LS+N+LKS + L L+ +DL + I+N+ F N LR+L L N
Sbjct: 60 KILDLSKNRLKSINPEEFISYPL--LEEIDLSDNIIANVEPGAFNNLFNLRSLRLKGNRL 117
Query: 173 ELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSV 232
+L+ L V T L +L LD+S + L + F + L++L + N L
Sbjct: 118 KLVPLGVFTGLS----NLTKLDISENKIV-ILLDYMFQDLHNLKSLEVGDNDLVYISHR- 171
Query: 233 ALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLD 292
A L L +L+L C L+ +P L L + H + + L L++L+
Sbjct: 172 AFSGLLSLEQLTLEKCNLTAVPTEALSHLRSLIALHLKHLNINNMPVYAFKRLFHLKNLE 231
Query: 293 MGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNET 352
+ Y L + + L +L +L ++ L T+ F++L +L+ L L+ ++ +
Sbjct: 232 IDYWPLLDLMPANSLYGLNLTSLSITNTNLSTVPFLAFKHLVYLTHLNLSYNPISTIEAG 291
Query: 353 VFHENYTYPDLEELRLSGNPLHVL-PDS 379
+F + L+EL + G L + P S
Sbjct: 292 MFSDLIR---LQELHIVGAQLRTIEPHS 316
>FB|FBgn0004364 [details] [associations]
symbol:18w "18 wheeler" species:7227 "Drosophila
melanogaster" [GO:0005886 "plasma membrane" evidence=ISS;IDA]
[GO:0004888 "transmembrane signaling receptor activity"
evidence=ISS] [GO:0007155 "cell adhesion" evidence=IDA] [GO:0009653
"anatomical structure morphogenesis" evidence=IMP] [GO:0006955
"immune response" evidence=IEP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0019731 "antibacterial humoral response"
evidence=NAS;IMP;TAS] [GO:0048598 "embryonic morphogenesis"
evidence=TAS] [GO:0006952 "defense response" evidence=TAS]
[GO:0007165 "signal transduction" evidence=IEA;ISS] [GO:0016021
"integral to membrane" evidence=ISS] [GO:0007275 "multicellular
organismal development" evidence=TAS] [GO:0019730 "antimicrobial
humoral response" evidence=IMP] InterPro:IPR000157
InterPro:IPR001611 Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450
SMART:SM00255 GO:GO:0016021 GO:GO:0005886 GO:GO:0005737
GO:GO:0048598 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007155 GO:GO:0019731 InterPro:IPR000372
SMART:SM00013 GO:GO:0004888 InterPro:IPR026906 Pfam:PF13306
SUPFAM:SSF52200 FlyBase:FBgn0004364 EMBL:L23171 PIR:T13852
PIR:T13887 HSSP:O60603 ProteinModelPortal:Q24591 STRING:Q24591
PRIDE:Q24591 InParanoid:Q24591 ArrayExpress:Q24591 Bgee:Q24591
Uniprot:Q24591
Length = 1389
Score = 259 (96.2 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
Identities = 116/430 (26%), Positives = 186/430 (43%)
Query: 79 IEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVL-GN- 136
+ PG+F L L L ++ C L + P+AF+ L LK L L + TL L G
Sbjct: 81 LAPGLFRQLQKLSELRIDACKLQRVPPNAFEGLMSLKRLTLESHNAVWGPGKTLELHGQS 140
Query: 137 ---LGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSL 193
L +L L L + I LP+ V+ + L+ LNL +N + A LG +
Sbjct: 141 FQGLKELSELHLGDNNIRQLPEGVWCSMPSLQLLNLTQNRIRS---AEFLGFSEKLCAGS 197
Query: 194 DLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRL 253
LSN + G +S ++L+TL +S N L + + L +L LSL++ +S L
Sbjct: 198 ALSNAN--GAVS-----GGSELQTLDVSFNELRSLPDAWGASRLRRLQTLSLQHNNISTL 250
Query: 254 PANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLK 313
N + L+ L+IS+N L+ + + + L L + ++L + + ++ L
Sbjct: 251 APNALAGLSSLRVLNISYNHLVSLPSEAFAGNKELRELHLQGNDLYELPKGLLHRLEQLL 310
Query: 314 TLILSGNKLET--LESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLS-G 370
L LSGN+L + +++ F L L VL L+N LTR+ F E Y L+ S G
Sbjct: 311 VLDLSGNQLTSHHVDNSTFAGLIRLIVLNLSNNALTRIGSKTFKELYFLQILDMRNNSIG 370
Query: 371 N-------PLHVLPD-STKQYSMRTIPTQIWKNFDFLVILFILNETV-FHENYTY---PD 418
+ PL+ L + + + T+ +I+ L L + N V E+ + D
Sbjct: 371 HIEEGAFLPLYNLHTLNLAENRLHTLDNRIFNGLYVLTKLTLNNNLVSIVESQAFRNCSD 430
Query: 419 LEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNN 478
L+EL LS N L +P +I N F N +T L L +N
Sbjct: 431 LKELDLSSNQLTEVPEAVQDLSMLKTLDLGEN---QISEFKNNTFRNLNQLTGLRLIDNR 487
Query: 479 LSMTSELSFQ 488
+ + FQ
Sbjct: 488 IGNITVGMFQ 497
Score = 237 (88.5 bits), Expect = 2.4e-17, Sum P(2) = 2.4e-17
Identities = 95/323 (29%), Positives = 150/323 (46%)
Query: 54 KINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLML--NRCN----LTY----I 103
+++ Q F L L++L L N +R + GV+ + SL+ L L NR L +
Sbjct: 135 ELHGQSFQGLKELSELHLGDNNIRQLPEGVWCSMPSLQLLNLTQNRIRSAEFLGFSEKLC 194
Query: 104 SPSAFDNLN-------HLKTLELSQNKLKSHID-WTLVLGNLGKLDTLDLRQSGISNLPD 155
+ SA N N L+TL++S N+L+S D W L +L TL L+ + IS L
Sbjct: 195 AGSALSNANGAVSGGSELQTLDVSFNELRSLPDAWGA--SRLRRLQTLSLQHNNISTLAP 252
Query: 156 NVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKG----PLSEDAFVN 211
N A + LR LN++ N L+ L G +L HL+G L +
Sbjct: 253 NALAGLSSLRVLNISYNHLVSLPSEAFAGNK-------ELRELHLQGNDLYELPKGLLHR 305
Query: 212 ATKLRTLYLSGNPLSAADL-SVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDIS 270
+L L LSGN L++ + + L +L L+L N L+R+ + TF LQ LD+
Sbjct: 306 LEQLLVLDLSGNQLTSHHVDNSTFAGLIRLIVLNLSNNALTRIGSKTFKELYFLQILDMR 365
Query: 271 HNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLF 330
+N + PL +L L++ + L + F + L L L+ N + +ES F
Sbjct: 366 NNSIGHIEEGAFLPLYNLHTLNLAENRLHTLDNRIFNGLYVLTKLTLNNNLVSIVESQAF 425
Query: 331 QNLTHLSVLELNNCGLTRLNETV 353
+N + L L+L++ LT + E V
Sbjct: 426 RNCSDLKELDLSSNQLTEVPEAV 448
Score = 209 (78.6 bits), Expect = 4.5e-13, Sum P(2) = 4.5e-13
Identities = 98/362 (27%), Positives = 161/362 (44%)
Query: 24 LNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGN-----PLRI 78
L+A+ + P G F + L L + C L ++ P F L +L +L L + P +
Sbjct: 76 LHASELAP--GLFRQLQKLSELRIDACKLQRVPPNAFEGLMSLKRLTLESHNAVWGPGKT 133
Query: 79 IE-PGV-FDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGN 136
+E G F L L L L N+ + + ++ L+ L L+QN+++S LG
Sbjct: 134 LELHGQSFQGLKELSELHLGDNNIRQLPEGVWCSMPSLQLLNLTQNRIRS----AEFLGF 189
Query: 137 LGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLS 196
KL S +SN + + + L+ L+++ NEL L A + L L +L L
Sbjct: 190 SEKL----CAGSALSNA-NGAVSGGSELQTLDVSFNELRSLPDAWGASR-LRRLQTLSLQ 243
Query: 197 NCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPAN 256
+ ++ L+ +A + LR L +S N L + S A +L L L+ L LP
Sbjct: 244 HNNIS-TLAPNALAGLSSLRVLNISYNHLVSLP-SEAFAGNKELRELHLQGNDLYELPKG 301
Query: 257 TFHRFTCLQELDISHNPLIDAFT--ALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKT 314
HR L LD+S N L + + L L L++ + L RI TF ++ L+
Sbjct: 302 LLHRLEQLLVLDLSGNQLTSHHVDNSTFAGLIRLIVLNLSNNALTRIGSKTFKELYFLQI 361
Query: 315 LILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLH 374
L + N + +E G F L +L L L L L+ +F+ Y L +L L+ N +
Sbjct: 362 LDMRNNSIGHIEEGAFLPLYNLHTLNLAENRLHTLDNRIFNGLYV---LTKLTLNNNLVS 418
Query: 375 VL 376
++
Sbjct: 419 IV 420
Score = 199 (75.1 bits), Expect = 5.4e-12, Sum P(2) = 5.4e-12
Identities = 89/358 (24%), Positives = 158/358 (44%)
Query: 19 LITINLNANPIQPVEGAFLVAR--SLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPL 76
L T++++ N ++ + A+ +R L L +Q +S + P L++L L++S N L
Sbjct: 212 LQTLDVSFNELRSLPDAWGASRLRRLQTLSLQHNNISTLAPNALAGLSSLRVLNISYNHL 271
Query: 77 RIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSH-IDWTLVLG 135
+ F L L L +L + L L L+LS N+L SH +D + G
Sbjct: 272 VSLPSEAFAGNKELRELHLQGNDLYELPKGLLHRLEQLLVLDLSGNQLTSHHVDNSTFAG 331
Query: 136 NLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDL 195
L +L L+L + ++ + F +L+ L++ N + ++ L L +L +L+L
Sbjct: 332 -LIRLIVLNLSNNALTRIGSKTFKELYFLQILDMRNNSIGHIEEGAFLP--LYNLHTLNL 388
Query: 196 SNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPA 255
+ L L F L L L+ N +S + S A + + L L L + L+ +P
Sbjct: 389 AENRLH-TLDNRIFNGLYVLTKLTLNNNLVSIVE-SQAFRNCSDLKELDLSSNQLTEVP- 445
Query: 256 NTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTL 315
+ L+ LD+ N + + L L L + + + I+ F + L L
Sbjct: 446 EAVQDLSMLKTLDLGENQISEFKNNTFRNLNQLTGLRLIDNRIGNITVGMFQDLPRLSVL 505
Query: 316 ILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPL 373
L+ N+++++E G F T + + L+ LT +N +F T L L LS N L
Sbjct: 506 NLAKNRIQSIERGAFDKNTEIEAIRLDKNFLTDING-IFA---TLASLLWLNLSENHL 559
Score = 181 (68.8 bits), Expect = 4.6e-10, Sum P(2) = 4.6e-10
Identities = 85/307 (27%), Positives = 139/307 (45%)
Query: 22 INLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIE 80
+++ N I +E GAFL +L L + E L ++ + F L L KL L+ N + I+E
Sbjct: 362 LDMRNNSIGHIEEGAFLPLYNLHTLNLAENRLHTLDNRIFNGLYVLTKLTLNNNLVSIVE 421
Query: 81 PGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKL 140
F + L+ L L+ LT + P A +L+ LKTL+L +N++ + T NL +L
Sbjct: 422 SQAFRNCSDLKELDLSSNQLTEV-PEAVQDLSMLKTLDLGENQISEFKNNTF--RNLNQL 478
Query: 141 DTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHL 200
L L + I N+ +F + L LNLA+N + ++ +N ++++ L L
Sbjct: 479 TGLRLIDNRIGNITVGMFQDLPRLSVLNLAKNRIQSIERGA-FDKN-TEIEAIRLDKNFL 536
Query: 201 KGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTF-- 258
F L L LS N L D A P + L L + + L N +
Sbjct: 537 TD--INGIFATLASLLWLNLSENHLVWFDY--AFIP-SNLKWLDIHGNYIEAL-GNYYKL 590
Query: 259 HRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILS 318
+ LD SHN + + A+ P S+E L + + + +I +TF+ T L + L
Sbjct: 591 QEEIRVTTLDASHNRITE-IGAMSVP-NSIELLFINNNIIGQIQANTFVDKTRLARVDLY 648
Query: 319 GNKLETL 325
N L +
Sbjct: 649 ANVLSKI 655
Score = 139 (54.0 bits), Expect = 5.6e-12, Sum P(2) = 5.6e-12
Identities = 76/277 (27%), Positives = 123/277 (44%)
Query: 19 LITINLNANPIQPVEGAFLVARSLLY-LYMQECTLSKINPQFFTNLTTLNKLDLSGNPLR 77
L T+NL N + ++ +L L + +S + Q F N + L +LDLS N L
Sbjct: 383 LHTLNLAENRLHTLDNRIFNGLYVLTKLTLNNNLVSIVESQAFRNCSDLKELDLSSNQLT 442
Query: 78 IIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNL 137
+ V D L+ L+ L L ++ + F NLN L L L N++ +I + +L
Sbjct: 443 EVPEAVQD-LSMLKTLDLGENQISEFKNNTFRNLNQLTGLRLIDNRI-GNITVGM-FQDL 499
Query: 138 GKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLD-----VATTLGQNLV--HL 190
+L L+L ++ I ++ F NT + + L +N L D++ +A+ L NL HL
Sbjct: 500 PRLSVLNLAKNRIQSIERGAFDKNTEIEAIRLDKNFLTDINGIFATLASLLWLNLSENHL 559
Query: 191 DSLDL----SNCH---LKGPLSEDAFVNATKLR------TLYLSGNPLSAADLSVALKPL 237
D SN + G E A N KL+ TL S N ++ ++ P
Sbjct: 560 VWFDYAFIPSNLKWLDIHGNYIE-ALGNYYKLQEEIRVTTLDASHNRIT--EIGAMSVP- 615
Query: 238 TKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPL 274
+ L + N + ++ ANTF T L +D+ N L
Sbjct: 616 NSIELLFINNNIIGQIQANTFVDKTRLARVDLYANVL 652
Score = 133 (51.9 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 61/220 (27%), Positives = 103/220 (46%)
Query: 19 LITINLNANPIQPVEG-AFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLR 77
L T++L N I + F L L + + + I F +L L+ L+L+ N ++
Sbjct: 454 LKTLDLGENQISEFKNNTFRNLNQLTGLRLIDNRIGNITVGMFQDLPRLSVLNLAKNRIQ 513
Query: 78 IIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNL 137
IE G FD T +E + L++ LT I+ F L L L LS+N L D+ + NL
Sbjct: 514 SIERGAFDKNTEIEAIRLDKNFLTDIN-GIFATLASLLWLNLSENHLV-WFDYAFIPSNL 571
Query: 138 GKLDTLDLRQSGISNLPDNVFANNTWLR--NLNLAENELIDLDVATTLGQNLVHLDSLDL 195
LD+ + I L N + +R L+ + N + ++ + N + L L +
Sbjct: 572 ---KWLDIHGNYIEAL-GNYYKLQEEIRVTTLDASHNRITEIGAMSV--PNSIEL--LFI 623
Query: 196 SNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALK 235
+N ++ G + + FV+ T+L + L N LS L+ AL+
Sbjct: 624 NN-NIIGQIQANTFVDKTRLARVDLYANVLSKISLN-ALR 661
Score = 115 (45.5 bits), Expect = 5.6e-12, Sum P(2) = 5.6e-12
Identities = 41/149 (27%), Positives = 67/149 (44%)
Query: 247 NCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTF 306
+CG L A + +L + N + + L+ +L L + SNL + +
Sbjct: 777 DCGRQDLAALPNRIPQDVSDLYLDGNNMPELEVGHLTGRRNLRALYLNASNLMTLQNGSL 836
Query: 307 LKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEEL 366
++ +L+ L L NKL LE F++L L L L+N LT ++ F + LE L
Sbjct: 837 AQLVNLRVLHLENNKLTALEGTEFRSLGLLRELYLHNNMLTHISNATFEPLVS---LEVL 893
Query: 367 RLSGNPLHVLPDSTKQYSMR--TIPTQIW 393
RL N L LP ++S++ T+ W
Sbjct: 894 RLDNNRLSSLPHLQYRHSLQGLTLGRNAW 922
Score = 78 (32.5 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 30/108 (27%), Positives = 45/108 (41%)
Query: 218 LYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDA 277
LYL GN + ++ L L L L L L + + L+ L + +N L
Sbjct: 797 LYLDGNNMPELEVG-HLTGRRNLRALYLNASNLMTLQNGSLAQLVNLRVLHLENNKLTAL 855
Query: 278 FTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETL 325
L L L + + L IS +TF + SL+ L L N+L +L
Sbjct: 856 EGTEFRSLGLLRELYLHNNMLTHISNATFEPLVSLEVLRLDNNRLSSL 903
Score = 65 (27.9 bits), Expect = 2.4e-17, Sum P(2) = 2.4e-17
Identities = 37/123 (30%), Positives = 55/123 (44%)
Query: 315 LILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLH 374
L L GN + LE G +L L LN L L +N + L LR+ LH
Sbjct: 797 LYLDGNNMPELEVGHLTGRRNLRALYLNASNLMTL------QNGSLAQLVNLRV----LH 846
Query: 375 VLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFH-ENYTY-P--DLEELRLSGNPLH 430
+ ++ K ++ T+ +++ L L++ N + H N T+ P LE LRL N L
Sbjct: 847 L--ENNKLTALEG--TE-FRSLGLLRELYLHNNMLTHISNATFEPLVSLEVLRLDNNRLS 901
Query: 431 VLP 433
LP
Sbjct: 902 SLP 904
Score = 53 (23.7 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 518 RAITSIKLVGNPWKCDCNIADMWEWATR 545
+ + L GNP++CDC++ EW R
Sbjct: 669 KPVPEFYLGGNPFECDCSM----EWLQR 692
Score = 46 (21.3 bits), Expect = 9.3e-18, Sum P(2) = 9.3e-18
Identities = 18/81 (22%), Positives = 28/81 (34%)
Query: 454 KIDYLPPNVFNNTRNITSLNLANNNLSMTSELSFQFXXXXXXXXXXXXXXXXXTHISPTV 513
K+ L F + + L L NN L+ S +F+ H+
Sbjct: 851 KLTALEGTEFRSLGLLRELYLHNNMLTHISNATFEPLVSLEVLRLDNNRLSSLPHLQ--- 907
Query: 514 LRHNRAITSIKLVGNPWKCDC 534
RH+ + + L N W C C
Sbjct: 908 YRHS--LQGLTLGRNAWSCRC 926
>RGD|1307733 [details] [associations]
symbol:Lgr5 "leucine rich repeat containing G protein coupled
receptor 5" species:10116 "Rattus norvegicus" [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016500 "protein-hormone receptor
activity" evidence=IEA] [GO:0048839 "inner ear development"
evidence=IEA;ISO] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000276 InterPro:IPR002131 InterPro:IPR017452
Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373 PROSITE:PS50262
PROSITE:PS51450 RGD:1307733 GO:GO:0016021 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0048839 GO:GO:0016500 EMBL:CH473960
GeneTree:ENSGT00650000092962 CTD:8549 KO:K04308 OMA:FNPHFKE
OrthoDB:EOG46143B IPI:IPI00360187 RefSeq:NP_001100254.1
UniGene:Rn.214063 Ensembl:ENSRNOT00000005814 GeneID:299802
KEGG:rno:299802 UCSC:RGD:1307733 NextBio:645794 Uniprot:D4AC13
Length = 907
Score = 258 (95.9 bits), Expect = 1.8e-18, P = 1.8e-18
Identities = 103/373 (27%), Positives = 166/373 (44%)
Query: 22 INLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIE 80
+ L N + + +GAF SL L +Q L ++ + NL +L L L N + +
Sbjct: 95 LRLAGNALTHIPKGAFAGLHSLKVLMLQNNQLRQVPEEALQNLRSLQSLRLDANHISYVP 154
Query: 81 PGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKL 140
P F L SL +L L+ LT + AF +L+ L+ + L+ NK+ D GNL L
Sbjct: 155 PSCFSGLHSLRHLWLDDNALTDVPVQAFRSLSALQAMTLALNKIHHIADHAF--GNLSSL 212
Query: 141 DTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHL 200
L L + I +L F L L+L N +LD T + L +L L + ++
Sbjct: 213 VVLHLHNNRIHSLGKKCFDGLHSLETLDLNYN---NLDEFPTAIKTLSNLKELGFHSNNI 269
Query: 201 KGPLSEDAFVNATKLRTLYLSGNPLSAADLSV-----ALKPLT----------------- 238
+ + E AFV L T++ NP+ +S L+ LT
Sbjct: 270 RS-IPERAFVGNPSLITIHFYDNPIQFVGISAFQHLPELRTLTLNGASQITEFPDLTGTA 328
Query: 239 KLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNL 298
L L+L +S LP + LQ LD+S+N L D + LS + L+ +D+ ++ +
Sbjct: 329 TLESLTLTGAKISSLPQTVCDQLPNLQVLDLSYNLLEDLPS--LSGCQKLQKIDLRHNEI 386
Query: 299 QRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENY 358
I TF ++ +L++L L+ NK+ + F L L L+L++ L+ T H
Sbjct: 387 YEIKGGTFQQLFNLRSLNLARNKIAIIHPNAFSTLPSLIKLDLSSNLLSSFPVTGLH--- 443
Query: 359 TYPDLEELRLSGN 371
L L+L+GN
Sbjct: 444 ---GLTHLKLTGN 453
Score = 206 (77.6 bits), Expect = 7.8e-13, P = 7.8e-13
Identities = 119/416 (28%), Positives = 175/416 (42%)
Query: 37 LVARSLLYLYMQECTLSKINPQFFTNLTTLNK-LDLSGNPLRIIEPGVFDPLTSLEYLML 95
L R LL + + LS++ P +NL+ LDLS N + + + L LE L L
Sbjct: 42 LDGRMLLRVDCSDLGLSEL-P---SNLSVFTSYLDLSMNNISQLPASLLHRLRFLEELRL 97
Query: 96 NRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPD 155
LT+I AF L+ LK L L N+L+ + L NL L +L L + IS +P
Sbjct: 98 AGNALTHIPKGAFAGLHSLKVLMLQNNQLRQVPEEALQ--NLRSLQSLRLDANHISYVPP 155
Query: 156 NVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKL 215
+ F+ LR+L L +N L D+ V + + +L L+ H +++ AF N + L
Sbjct: 156 SCFSGLHSLRHLWLDDNALTDVPVQAFRSLSALQAMTLALNKIH---HIADHAFGNLSSL 212
Query: 216 RTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLI 275
L+L N + + L L L L L P + L+EL N +
Sbjct: 213 VVLHLHNNRIHSLGKK-CFDGLHSLETLDLNYNNLDEFPT-AIKTLSNLKELGFHSNNIR 270
Query: 276 DAFTALLSPLESLEHLDMGYSN-LQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLT 334
SL + Y N +Q + S F + L+TL L+G T L T
Sbjct: 271 SIPERAFVGNPSLITIHF-YDNPIQFVGISAFQHLPELRTLTLNGASQITEFPDLTGTAT 329
Query: 335 HLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIP---TQ 391
L L L ++ L +TV + P+L+ L LS N L LP + ++ I +
Sbjct: 330 -LESLTLTGAKISSLPQTVCDQ---LPNLQVLDLSYNLLEDLPSLSGCQKLQKIDLRHNE 385
Query: 392 IWK----NFDFLVILFILNET-----VFHENY--TYPDLEELRLSGNPLHVLP-TG 435
I++ F L L LN + H N T P L +L LS N L P TG
Sbjct: 386 IYEIKGGTFQQLFNLRSLNLARNKIAIIHPNAFSTLPSLIKLDLSSNLLSSFPVTG 441
Score = 199 (75.1 bits), Expect = 4.5e-12, P = 4.5e-12
Identities = 91/343 (26%), Positives = 147/343 (42%)
Query: 1 MWQGHPVYNDRRNLDNPGLITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFF 60
M +G P Y LD L+ ++ + + + V S L L M +S++
Sbjct: 30 MPRGCPSYC-HCELDGRMLLRVDCSDLGLSELPSNLSVFTSYLDLSMNN--ISQLPASLL 86
Query: 61 TNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELS 120
L L +L L+GN L I G F L SL+ LML L + A NL L++L L
Sbjct: 87 HRLRFLEELRLAGNALTHIPKGAFAGLHSLKVLMLQNNQLRQVPEEALQNLRSLQSLRLD 146
Query: 121 QNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVA 180
N + S++ + G L L L L + ++++P F + + L+ + LA N++ +A
Sbjct: 147 ANHI-SYVPPSCFSG-LHSLRHLWLDDNALTDVPVQAFRSLSALQAMTLALNKIHH--IA 202
Query: 181 TTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKL 240
NL L L L N + L + F L TL L+ N L + A+K L+ L
Sbjct: 203 DHAFGNLSSLVVLHLHNNRIHS-LGKKCFDGLHSLETLDLNYNNLD--EFPTAIKTLSNL 259
Query: 241 HRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDM-GYSNLQ 299
L + + +P F L + NP+ + L L L + G S +
Sbjct: 260 KELGFHSNNIRSIPERAFVGNPSLITIHFYDNPIQFVGISAFQHLPELRTLTLNGASQIT 319
Query: 300 RISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELN 342
T +L++L L+G K+ +L + L +L VL+L+
Sbjct: 320 EFPDLT--GTATLESLTLTGAKISSLPQTVCDQLPNLQVLDLS 360
Score = 166 (63.5 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 90/360 (25%), Positives = 148/360 (41%)
Query: 143 LDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKG 202
LDL + IS LP ++ +L L LA N L + G L L L L N L+
Sbjct: 71 LDLSMNNISQLPASLLHRLRFLEELRLAGNALTHIPKGAFAG--LHSLKVLMLQNNQLR- 127
Query: 203 PLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFT 262
+ E+A N L++L L N +S S L L L L + L+ +P F +
Sbjct: 128 QVPEEALQNLRSLQSLRLDANHISYVPPS-CFSGLHSLRHLWLDDNALTDVPVQAFRSLS 186
Query: 263 CLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKL 322
LQ + ++ N + L SL L + + + + + F + SL+TL L+ N L
Sbjct: 187 ALQAMTLALNKIHHIADHAFGNLSSLVVLHLHNNRIHSLGKKCFDGLHSLETLDLNYNNL 246
Query: 323 ETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQ 382
+ + + + L++L L ++ + + E F N P L + NP+ + S Q
Sbjct: 247 DEFPTAI-KTLSNLKELGFHSNNIRSIPERAFVGN---PSLITIHFYDNPIQFVGISAFQ 302
Query: 383 Y--SMRTIP----TQIWKNFDF-----LVILFILNETVFHENYTY----PDLEELRLSGN 427
+ +RT+ +QI + D L L + + T P+L+ L LS N
Sbjct: 303 HLPELRTLTLNGASQITEFPDLTGTATLESLTLTGAKISSLPQTVCDQLPNLQVLDLSYN 362
Query: 428 PLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSF 487
L LP+ + +I + F N+ SLNLA N +++ +F
Sbjct: 363 LLEDLPSLSGCQKLQKIDLRHN----EIYEIKGGTFQQLFNLRSLNLARNKIAIIHPNAF 418
Score = 157 (60.3 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 98/408 (24%), Positives = 170/408 (41%)
Query: 90 LEYLMLNRCNLTYISPSAF-DNLNHLKT-LELSQNKLKSHIDWTLVLGNLGKLDTLDLRQ 147
L+ ML R + + + S NL+ + L+LS N + S + +L L L L+ L L
Sbjct: 42 LDGRMLLRVDCSDLGLSELPSNLSVFTSYLDLSMNNI-SQLPASL-LHRLRFLEELRLAG 99
Query: 148 SGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSED 207
+ ++++P FA L+ L L N+L V QNL L SL L H+ +
Sbjct: 100 NALTHIPKGAFAGLHSLKVLMLQNNQL--RQVPEEALQNLRSLQSLRLDANHISY-VPPS 156
Query: 208 AFVNATKLRTLYLSGNPLSAADLSV-ALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQE 266
F LR L+L N L+ D+ V A + L+ L ++L + + + F + L
Sbjct: 157 CFSGLHSLRHLWLDDNALT--DVPVQAFRSLSALQAMTLALNKIHHIADHAFGNLSSLVV 214
Query: 267 LDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLK-MTSLKTLILSGNKLETL 325
L + +N + L SLE LD+ Y+NL T +K +++LK L N + ++
Sbjct: 215 LHLHNNRIHSLGKKCFDGLHSLETLDLNYNNLDEFP--TAIKTLSNLKELGFHSNNIRSI 272
Query: 326 ESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSG-NPLHVLPDSTKQYS 384
F L + + + + + F P+L L L+G + + PD T +
Sbjct: 273 PERAFVGNPSLITIHFYDNPIQFVGISAFQH---LPELRTLTLNGASQITEFPDLTGTAT 329
Query: 385 MRTIPTQIWK--NFDFLVILFILNETVFHENYTY----PDL------EELRLSGNPLHVL 432
+ ++ K + V + N V +Y P L +++ L N ++ +
Sbjct: 330 LESLTLTGAKISSLPQTVCDQLPNLQVLDLSYNLLEDLPSLSGCQKLQKIDLRHNEIYEI 389
Query: 433 PTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNLS 480
G KI + PN F+ ++ L+L++N LS
Sbjct: 390 KGGTFQQLFNLRSLNLARN--KIAIIHPNAFSTLPSLIKLDLSSNLLS 435
>UNIPROTKB|D8MCT0 [details] [associations]
symbol:LGR5 "Leucine-rich repeat-containing G
protein-coupled receptor 5" species:9606 "Homo sapiens" [GO:0016500
"protein-hormone receptor activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0016500 EMBL:AC078860 EMBL:AC090116 HGNC:HGNC:4504
EMBL:FN820440 IPI:IPI00970955 SMR:D8MCT0 Ensembl:ENST00000536515
UCSC:uc021rar.1 Uniprot:D8MCT0
Length = 835
Score = 257 (95.5 bits), Expect = 2.0e-18, P = 2.0e-18
Identities = 92/329 (27%), Positives = 149/329 (45%)
Query: 44 YLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYI 103
YL + +S++ P +L L +L L+GN L I G F L SL+ LML L ++
Sbjct: 70 YLDLSMNNISQLLPNPLPSLRFLEELRLAGNALTYIPKGAFTGLYSLKVLMLQNNQLRHV 129
Query: 104 SPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTW 163
A NL L++L L N++ H L L+TLDL + + P + +
Sbjct: 130 PTEALQNLRSLQSLHLHNNRI--HSLGKKCFDGLHSLETLDLNYNNLDEFPTAIRTLSN- 186
Query: 164 LRNLNLAENELIDLDVATTLGQ-NLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSG 222
L+ L N + + +G +L+ + D + G AF + +LRTL L+G
Sbjct: 187 LKELGFHSNNIRSIPEKAFVGNPSLITIHFYD-NPIQFVG---RSAFQHLPELRTLTLNG 242
Query: 223 NPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALL 282
S L L L+L +S LP ++ LQ LD+S+N L D +
Sbjct: 243 --ASQITEFPDLTGTANLESLTLTGAQISSLPQTVCNQLPNLQVLDLSYNLLEDLPS--F 298
Query: 283 SPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELN 342
S + L+ +D+ ++ + I TF ++ SL++L L+ NK+ + F L L L+L+
Sbjct: 299 SVCQKLQKIDLRHNEIYEIKVDTFQQLLSLRSLNLAWNKIAIIHPNAFSTLPSLIKLDLS 358
Query: 343 NCGLTRLNETVFHENYTYPDLEELRLSGN 371
+ L+ T H L L+L+GN
Sbjct: 359 SNLLSSFPITGLH------GLTHLKLTGN 381
Score = 198 (74.8 bits), Expect = 5.1e-12, P = 5.1e-12
Identities = 91/323 (28%), Positives = 144/323 (44%)
Query: 22 INLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIE 80
+ L N + + +GAF SL L +Q L + + NL +L L L N + +
Sbjct: 95 LRLAGNALTYIPKGAFTGLYSLKVLMLQNNQLRHVPTEALQNLRSLQSLHLHNNRIHSLG 154
Query: 81 PGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKL 140
FD L SLE L LN NL P+A L++LK L N ++S I +GN L
Sbjct: 155 KKCFDGLHSLETLDLNYNNLDEF-PTAIRTLSNLKELGFHSNNIRS-IPEKAFVGN-PSL 211
Query: 141 DTLDLRQSGISNLPDNVFANNTWLRNLNL-AENELIDLDVATTLGQNLVHLDSLDLSNCH 199
T+ + I + + F + LR L L +++ + T +L+SL L+
Sbjct: 212 ITIHFYDNPIQFVGRSAFQHLPELRTLTLNGASQITEFPDLT----GTANLESLTLTGAQ 267
Query: 200 LKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFH 259
+ L + L+ L LS N L DL + KL ++ LR+ + + +TF
Sbjct: 268 ISS-LPQTVCNQLPNLQVLDLSYNLLE--DLP-SFSVCQKLQKIDLRHNEIYEIKVDTFQ 323
Query: 260 RFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSG 319
+ L+ L+++ N + S L SL LD+ SNL +S + L L L+G
Sbjct: 324 QLLSLRSLNLAWNKIAIIHPNAFSTLPSLIKLDLS-SNL--LSSFPITGLHGLTHLKLTG 380
Query: 320 NK-LETLESGLFQNLTHLSVLEL 341
N L++L S +N L V+E+
Sbjct: 381 NHALQSLISS--ENFPELKVIEM 401
Score = 169 (64.5 bits), Expect = 7.1e-09, P = 7.1e-09
Identities = 66/237 (27%), Positives = 107/237 (45%)
Query: 143 LDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKG 202
+D G+S LP N+ ++L +L+ N + L + L +L L+ L L+ L
Sbjct: 50 VDCSDLGLSELPSNLSVFTSYL---DLSMNNISQL-LPNPL-PSLRFLEELRLAGNALTY 104
Query: 203 PLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFT 262
+ + AF L+ L L N L AL+ L L L L N + L F
Sbjct: 105 -IPKGAFTGLYSLKVLMLQNNQLRHVPTE-ALQNLRSLQSLHLHNNRIHSLGKKCFDGLH 162
Query: 263 CLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKL 322
L+ LD+++N L D F + L +L+ L +N++ I F+ SL T+ N +
Sbjct: 163 SLETLDLNYNNL-DEFPTAIRTLSNLKELGFHSNNIRSIPEKAFVGNPSLITIHFYDNPI 221
Query: 323 ETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDS 379
+ + FQ+L L L LN G +++ E F + +LE L L+G + LP +
Sbjct: 222 QFVGRSAFQHLPELRTLTLN--GASQITE--FPDLTGTANLESLTLTGAQISSLPQT 274
Score = 143 (55.4 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 71/253 (28%), Positives = 104/253 (41%)
Query: 240 LHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQ 299
L R+ + GLS LP+N FT LD+S N + L L LE L + + L
Sbjct: 47 LLRVDCSDLGLSELPSN-LSVFTSY--LDLSMNNISQLLPNPLPSLRFLEELRLAGNALT 103
Query: 300 RISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYT 359
I + F + SLK L+L N+L + + QNL L L L+N + L + F ++
Sbjct: 104 YIPKGAFTGLYSLKVLMLQNNQLRHVPTEALQNLRSLQSLHLHNNRIHSLGKKCFDGLHS 163
Query: 360 YPDLEELRLSGNPLHVLPDSTKQYS-----------MRTIPTQIWK-NFDFLVILFILNE 407
LE L L+ N L P + + S +R+IP + + N + I F N
Sbjct: 164 ---LETLDLNYNNLDEFPTAIRTLSNLKELGFHSNNIRSIPEKAFVGNPSLITIHFYDNP 220
Query: 408 TVFHENYTYPDLEELR-LSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNT 466
F + L ELR L+ N + T +I LP V N
Sbjct: 221 IQFVGRSAFQHLPELRTLTLNGASQI-TEFPDLTGTANLESLTLTGAQISSLPQTVCNQL 279
Query: 467 RNITSLNLANNNL 479
N+ L+L+ N L
Sbjct: 280 PNLQVLDLSYNLL 292
Score = 141 (54.7 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 87/309 (28%), Positives = 124/309 (40%)
Query: 143 LDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKG 202
LDL + IS L N + +L L LA N L + G L L L L N L+
Sbjct: 71 LDLSMNNISQLLPNPLPSLRFLEELRLAGNALTYIPKGAFTG--LYSLKVLMLQNNQLRH 128
Query: 203 PLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFT 262
+E A N L++L+L N + + L L L L L P +
Sbjct: 129 VPTE-ALQNLRSLQSLHLHNNRIHSLGKK-CFDGLHSLETLDLNYNNLDEFPT-AIRTLS 185
Query: 263 CLQELDISHNPLIDAFTALLSPLESLEHLDMGYSN-LQRISRSTFLKMTSLKTLILSGNK 321
L+EL N + SL + Y N +Q + RS F + L+TL L+G
Sbjct: 186 NLKELGFHSNNIRSIPEKAFVGNPSLITIHF-YDNPIQFVGRSAFQHLPELRTLTLNGAS 244
Query: 322 LETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTK 381
T E +L L L ++ L +TV ++ P+L+ L LS N L LP +
Sbjct: 245 QIT-EFPDLTGTANLESLTLTGAQISSLPQTVCNQ---LPNLQVLDLSYNLLEDLPSFSV 300
Query: 382 QYSMRTIP---TQIWK----NFDFLVILFILNET-----VFHENY--TYPDLEELRLSGN 427
++ I +I++ F L+ L LN + H N T P L +L LS N
Sbjct: 301 CQKLQKIDLRHNEIYEIKVDTFQQLLSLRSLNLAWNKIAIIHPNAFSTLPSLIKLDLSSN 360
Query: 428 PLHVLP-TG 435
L P TG
Sbjct: 361 LLSSFPITG 369
Score = 124 (48.7 bits), Expect = 0.00053, P = 0.00053
Identities = 60/222 (27%), Positives = 97/222 (43%)
Query: 19 LITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRI 78
L T++LN N + A +L L + I + F +L + NP++
Sbjct: 164 LETLDLNYNNLDEFPTAIRTLSNLKELGFHSNNIRSIPEKAFVGNPSLITIHFYDNPIQF 223
Query: 79 IEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLG 138
+ F L L L LN + P N L++L L+ ++ S + T V L
Sbjct: 224 VGRSAFQHLPELRTLTLNGASQITEFPDLTGTAN-LESLTLTGAQISS-LPQT-VCNQLP 280
Query: 139 KLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNC 198
L LDL + + +LP F+ L+ ++L NE+ ++ V T Q L+ L SL+L+
Sbjct: 281 NLQVLDLSYNLLEDLPS--FSVCQKLQKIDLRHNEIYEIKVDTF--QQLLSLRSLNLAWN 336
Query: 199 HLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKL 240
+ + +AF L L LS N LS+ ++ L LT L
Sbjct: 337 KI-AIIHPNAFSTLPSLIKLDLSSNLLSSFPIT-GLHGLTHL 376
>UNIPROTKB|Q7L985 [details] [associations]
symbol:LINGO2 "Leucine-rich repeat and immunoglobulin-like
domain-containing nogo receptor-interacting protein 2" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 EMBL:CH471071
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 eggNOG:NOG278536 HOGENOM:HOG000246971
HOVERGEN:HBG057546 EMBL:AY358114 EMBL:AK056372 EMBL:AK172834
EMBL:AK290972 EMBL:BC137514 IPI:IPI00001120 RefSeq:NP_001245211.1
RefSeq:NP_689783.1 UniGene:Hs.662661 UniGene:Hs.739574
ProteinModelPortal:Q7L985 SMR:Q7L985 STRING:Q7L985
PhosphoSite:Q7L985 DMDM:172046190 PaxDb:Q7L985 PRIDE:Q7L985
Ensembl:ENST00000308675 Ensembl:ENST00000379992 GeneID:158038
KEGG:hsa:158038 UCSC:uc003zqu.1 CTD:158038 GeneCards:GC09M027940
HGNC:HGNC:21207 HPA:CAB025361 HPA:HPA016633 MIM:609793
neXtProt:NX_Q7L985 PharmGKB:PA162394096 InParanoid:Q7L985
OMA:DQDSGMY OrthoDB:EOG4NS3B7 PhylomeDB:Q7L985 GenomeRNAi:158038
NextBio:87602 Bgee:Q7L985 CleanEx:HS_LINGO2 Genevestigator:Q7L985
Uniprot:Q7L985
Length = 606
Score = 254 (94.5 bits), Expect = 2.2e-18, P = 2.2e-18
Identities = 84/292 (28%), Positives = 139/292 (47%)
Query: 52 LSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNL 111
L +NP+ F + L ++DLS N + +EPG F+ L +L L L L + F L
Sbjct: 69 LKSVNPEEFISYPLLEEIDLSDNIIANVEPGAFNNLFNLRSLRLKGNRLKLVPLGVFTGL 128
Query: 112 NHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAE 171
++L L++S+NK+ +D+ + +L L +L++ + + + F+ L L L +
Sbjct: 129 SNLTKLDISENKIVILLDY--MFQDLHNLKSLEVGDNDLVYISHRAFSGLLSLEQLTLEK 186
Query: 172 NELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLS 231
L V T +L L SL L + ++ + AF L+ L + PL +
Sbjct: 187 CNLTA--VPTEALSHLRSLISLHLKHLNINN-MPVYAFKRLFHLKHLEIDYWPLLDMMPA 243
Query: 232 VALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHL 291
+L L L LS+ N LS +P F L L++S+NP+ + S L L+ L
Sbjct: 244 NSLYGLN-LTSLSVTNTNLSTVPFLAFKHLVYLTHLNLSYNPISTIEAGMFSDLIRLQEL 302
Query: 292 DMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNN 343
+ + L+ I +F + L+ L +S N LETLE +F + L VL +NN
Sbjct: 303 HIVGAQLRTIEPHSFQGLRFLRVLNVSQNLLETLEENVFSSPRALEVLSINN 354
Score = 247 (92.0 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 91/307 (29%), Positives = 146/307 (47%)
Query: 69 LDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHI 128
LDLS N L+ + P F LE + L+ + + P AF+NL +L++L L N+LK +
Sbjct: 62 LDLSKNRLKSVNPEEFISYPLLEEIDLSDNIIANVEPGAFNNLFNLRSLRLKGNRLKL-V 120
Query: 129 DWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLV 188
+ G L L LD+ ++ I L D +F + L++L + +N+L+ + G L+
Sbjct: 121 PLGVFTG-LSNLTKLDISENKIVILLDYMFQDLHNLKSLEVGDNDLVYISHRAFSG--LL 177
Query: 189 HLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSV-ALKPLTKLHRLSLRN 247
L+ L L C+L +E A + L +L+L L+ ++ V A K L L L +
Sbjct: 178 SLEQLTLEKCNLTAVPTE-ALSHLRSLISLHLKH--LNINNMPVYAFKRLFHLKHLEIDY 234
Query: 248 CGL-SRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTF 306
L +PAN+ + L L +++ L L L HL++ Y+ + I F
Sbjct: 235 WPLLDMMPANSLYGLN-LTSLSVTNTNLSTVPFLAFKHLVYLTHLNLSYNPISTIEAGMF 293
Query: 307 LKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEEL 366
+ L+ L + G +L T+E FQ L L VL ++ L L E VF LE L
Sbjct: 294 SDLIRLQELHIVGAQLRTIEPHSFQGLRFLRVLNVSQNLLETLEENVFSSPRA---LEVL 350
Query: 367 RLSGNPL 373
++ NPL
Sbjct: 351 SINNNPL 357
Score = 207 (77.9 bits), Expect = 3.2e-13, P = 3.2e-13
Identities = 88/293 (30%), Positives = 138/293 (47%)
Query: 9 NDRRNLDNPGLITINLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLN 67
N + P L I+L+ N I VE GAF +L L ++ L + FT L+ L
Sbjct: 73 NPEEFISYPLLEEIDLSDNIIANVEPGAFNNLFNLRSLRLKGNRLKLVPLGVFTGLSNLT 132
Query: 68 KLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSH 127
KLD+S N + I+ +F L +L+ L + +L YIS AF L L+ L L + L +
Sbjct: 133 KLDISENKIVILLDYMFQDLHNLKSLEVGDNDLVYISHRAFSGLLSLEQLTLEKCNLTA- 191
Query: 128 IDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTL-GQN 186
+ T L +L L +L L+ I+N+P F L++L + L+D+ A +L G N
Sbjct: 192 VP-TEALSHLRSLISLHLKHLNINNMPVYAFKRLFHLKHLEIDYWPLLDMMPANSLYGLN 250
Query: 187 LVHLDSLDLSNCHLKG-PLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSL 245
L SL ++N +L P AF + L L LS NP+S + + L +L L +
Sbjct: 251 LT---SLSVTNTNLSTVPFL--AFKHLVYLTHLNLSYNPISTIEAGM-FSDLIRLQELHI 304
Query: 246 RNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNL 298
L + ++F L+ L++S N L + S +LE L + + L
Sbjct: 305 VGAQLRTIEPHSFQGLRFLRVLNVSQNLLETLEENVFSSPRALEVLSINNNPL 357
Score = 159 (61.0 bits), Expect = 5.4e-08, P = 5.4e-08
Identities = 71/268 (26%), Positives = 121/268 (45%)
Query: 115 KTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAEN-- 172
K L+LS+N+LKS + L L+ +DL + I+N+ F N LR+L L N
Sbjct: 60 KILDLSKNRLKSVNPEEFISYPL--LEEIDLSDNIIANVEPGAFNNLFNLRSLRLKGNRL 117
Query: 173 ELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSV 232
+L+ L V T L +L LD+S + L + F + L++L + N L
Sbjct: 118 KLVPLGVFTGLS----NLTKLDISENKIV-ILLDYMFQDLHNLKSLEVGDNDLVYISHR- 171
Query: 233 ALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLD 292
A L L +L+L C L+ +P L L + H + + L L+HL+
Sbjct: 172 AFSGLLSLEQLTLEKCNLTAVPTEALSHLRSLISLHLKHLNINNMPVYAFKRLFHLKHLE 231
Query: 293 MGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNET 352
+ Y L + + L +L +L ++ L T+ F++L +L+ L L+ ++ +
Sbjct: 232 IDYWPLLDMMPANSLYGLNLTSLSVTNTNLSTVPFLAFKHLVYLTHLNLSYNPISTIEAG 291
Query: 353 VFHENYTYPDLEELRLSGNPLHVL-PDS 379
+F + L+EL + G L + P S
Sbjct: 292 MFSDLIR---LQELHIVGAQLRTIEPHS 316
Score = 153 (58.9 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 75/307 (24%), Positives = 128/307 (41%)
Query: 193 LDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSR 252
LDLS LK ++ + F++ L + LS N ++ + A L L L L+ L
Sbjct: 62 LDLSKNRLKS-VNPEEFISYPLLEEIDLSDNIIANVEPG-AFNNLFNLRSLRLKGNRLKL 119
Query: 253 LPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSL 312
+P F + L +LDIS N ++ + L +L+ L++G ++L IS F + SL
Sbjct: 120 VPLGVFTGLSNLTKLDISENKIVILLDYMFQDLHNLKSLEVGDNDLVYISHRAFSGLLSL 179
Query: 313 KTLILSGNKLETLESGLFQNLT-----HLSVLELNNCGLTRLNETVFHENYTYPDLEEL- 366
+ L L L + + +L HL L +NN + +FH + D L
Sbjct: 180 EQLTLEKCNLTAVPTEALSHLRSLISLHLKHLNINNMPVYAFKR-LFHLKHLEIDYWPLL 238
Query: 367 -RLSGNPLHVL---PDSTKQYSMRTIPTQIWKNFDFLVILFI-LNETVFHENYTYPDL-- 419
+ N L+ L S ++ T+P +K+ +L L + N E + DL
Sbjct: 239 DMMPANSLYGLNLTSLSVTNTNLSTVPFLAFKHLVYLTHLNLSYNPISTIEAGMFSDLIR 298
Query: 420 -EELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNN 478
+EL + G L + + ++ L NVF++ R + L++ NN
Sbjct: 299 LQELHIVGAQLRTIEPHSFQGLRFLRVLNVSQNL--LETLEENVFSSPRALEVLSINNNP 356
Query: 479 LSMTSEL 485
L+ L
Sbjct: 357 LACDCRL 363
>UNIPROTKB|O75473 [details] [associations]
symbol:LGR5 "Leucine-rich repeat-containing G-protein
coupled receptor 5" species:9606 "Homo sapiens" [GO:0016500
"protein-hormone receptor activity" evidence=IEA] [GO:0048839
"inner ear development" evidence=IEA] [GO:0004930 "G-protein
coupled receptor activity" evidence=TAS] [GO:0005887 "integral to
plasma membrane" evidence=TAS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=TAS] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS00237 PROSITE:PS50262 PROSITE:PS51450 GO:GO:0005887
GO:GO:0004930 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0048839
GO:GO:0016500 InterPro:IPR026906 Pfam:PF13306 HOVERGEN:HBG031675
HOGENOM:HOG000231829 EMBL:AF062006 EMBL:AF061444 EMBL:AC078860
EMBL:AC090116 EMBL:BC096324 EMBL:BC096325 EMBL:BC096326
EMBL:BC099650 IPI:IPI00021131 IPI:IPI00940760 PIR:JE0176
RefSeq:NP_003658.1 UniGene:Hs.658889 ProteinModelPortal:O75473
SMR:O75473 STRING:O75473 PhosphoSite:O75473 PRIDE:O75473
Ensembl:ENST00000266674 Ensembl:ENST00000540815 GeneID:8549
KEGG:hsa:8549 UCSC:uc001swl.3 UCSC:uc001swm.3 CTD:8549
GeneCards:GC12P071833 HGNC:HGNC:4504 HPA:HPA012530 MIM:606667
neXtProt:NX_O75473 PharmGKB:PA28894 InParanoid:O75473 KO:K04308
OMA:FNPHFKE OrthoDB:EOG46143B PhylomeDB:O75473 GenomeRNAi:8549
NextBio:32032 ArrayExpress:O75473 Bgee:O75473 CleanEx:HS_LGR5
Genevestigator:O75473 GermOnline:ENSG00000139292 Uniprot:O75473
Length = 907
Score = 257 (95.5 bits), Expect = 2.2e-18, P = 2.2e-18
Identities = 107/378 (28%), Positives = 167/378 (44%)
Query: 22 INLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIE 80
+ L N + + +GAF SL L +Q L + + NL +L L L N + +
Sbjct: 95 LRLAGNALTYIPKGAFTGLYSLKVLMLQNNQLRHVPTEALQNLRSLQSLRLDANHISYVP 154
Query: 81 PGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKL 140
P F L SL +L L+ LT I AF +L+ L+ + L+ NK+ HI GNL L
Sbjct: 155 PSCFSGLHSLRHLWLDDNALTEIPVQAFRSLSALQAMTLALNKIH-HIP-DYAFGNLSSL 212
Query: 141 DTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHL 200
L L + I +L F L L+L N +LD T + L +L L + ++
Sbjct: 213 VVLHLHNNRIHSLGKKCFDGLHSLETLDLNYN---NLDEFPTAIRTLSNLKELGFHSNNI 269
Query: 201 KGPLSEDAFVNATKLRTLYLSGNPLSAADLSV-----ALKPLT----------------- 238
+ + E AFV L T++ NP+ S L+ LT
Sbjct: 270 RS-IPEKAFVGNPSLITIHFYDNPIQFVGRSAFQHLPELRTLTLNGASQITEFPDLTGTA 328
Query: 239 KLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNL 298
L L+L +S LP ++ LQ LD+S+N L D + S + L+ +D+ ++ +
Sbjct: 329 NLESLTLTGAQISSLPQTVCNQLPNLQVLDLSYNLLEDLPS--FSVCQKLQKIDLRHNEI 386
Query: 299 QRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENY 358
I TF ++ SL++L L+ NK+ + F L L L+L++ L+ T H
Sbjct: 387 YEIKVDTFQQLLSLRSLNLAWNKIAIIHPNAFSTLPSLIKLDLSSNLLSSFPITGLH--- 443
Query: 359 TYPDLEELRLSGNPLHVL 376
L L+L+GN H L
Sbjct: 444 ---GLTHLKLTGN--HAL 456
Score = 231 (86.4 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 121/413 (29%), Positives = 177/413 (42%)
Query: 40 RSLLYLYMQECTLSKINPQFFTNLTTLNK-LDLSGNPLRIIEPGVFDPLTSLEYLMLNRC 98
R LL + + LS++ P +NL+ LDLS N + + P L LE L L
Sbjct: 45 RMLLRVDCSDLGLSEL-P---SNLSVFTSYLDLSMNNISQLLPNPLPSLRFLEELRLAGN 100
Query: 99 NLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVF 158
LTYI AF L LK L L N+L+ H+ T L NL L +L L + IS +P + F
Sbjct: 101 ALTYIPKGAFTGLYSLKVLMLQNNQLR-HVP-TEALQNLRSLQSLRLDANHISYVPPSCF 158
Query: 159 ANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTL 218
+ LR+L L +N L ++ V + + +L L+ H + + AF N + L L
Sbjct: 159 SGLHSLRHLWLDDNALTEIPVQAFRSLSALQAMTLALNKIH---HIPDYAFGNLSSLVVL 215
Query: 219 YLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAF 278
+L N + + L L L L L P + L+EL N +
Sbjct: 216 HLHNNRIHSLGKK-CFDGLHSLETLDLNYNNLDEFPT-AIRTLSNLKELGFHSNNIRSIP 273
Query: 279 TALLSPLESLEHLDMGYSN-LQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLS 337
SL + Y N +Q + RS F + L+TL L+G T E +L
Sbjct: 274 EKAFVGNPSLITIHF-YDNPIQFVGRSAFQHLPELRTLTLNGASQIT-EFPDLTGTANLE 331
Query: 338 VLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIP---TQIWK 394
L L ++ L +TV ++ P+L+ L LS N L LP + ++ I +I++
Sbjct: 332 SLTLTGAQISSLPQTVCNQ---LPNLQVLDLSYNLLEDLPSFSVCQKLQKIDLRHNEIYE 388
Query: 395 ----NFDFLVILFILNET-----VFHENY--TYPDLEELRLSGNPLHVLP-TG 435
F L+ L LN + H N T P L +L LS N L P TG
Sbjct: 389 IKVDTFQQLLSLRSLNLAWNKIAIIHPNAFSTLPSLIKLDLSSNLLSSFPITG 441
Score = 156 (60.0 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 90/363 (24%), Positives = 152/363 (41%)
Query: 143 LDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKG 202
LDL + IS L N + +L L LA N L + G L L L L N L+
Sbjct: 71 LDLSMNNISQLLPNPLPSLRFLEELRLAGNALTYIPKGAFTG--LYSLKVLMLQNNQLRH 128
Query: 203 PLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFT 262
+E A N L++L L N +S S L L L L + L+ +P F +
Sbjct: 129 VPTE-ALQNLRSLQSLRLDANHISYVPPS-CFSGLHSLRHLWLDDNALTEIPVQAFRSLS 186
Query: 263 CLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKL 322
LQ + ++ N + L SL L + + + + + F + SL+TL L+ N L
Sbjct: 187 ALQAMTLALNKIHHIPDYAFGNLSSLVVLHLHNNRIHSLGKKCFDGLHSLETLDLNYNNL 246
Query: 323 ETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQ 382
+ + + + L++L L ++ + + E F N P L + NP+ + S Q
Sbjct: 247 DEFPTAI-RTLSNLKELGFHSNNIRSIPEKAFVGN---PSLITIHFYDNPIQFVGRSAFQ 302
Query: 383 Y--SMRTIP----TQIWK--------NFDFLVI----LFILNETVFHENYTYPDLEELRL 424
+ +RT+ +QI + N + L + + L +TV ++ P+L+ L L
Sbjct: 303 HLPELRTLTLNGASQITEFPDLTGTANLESLTLTGAQISSLPQTVCNQ---LPNLQVLDL 359
Query: 425 SGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNLSMTSE 484
S N L LP+ + +I + + F ++ SLNLA N +++
Sbjct: 360 SYNLLEDLPSFSVCQKLQKIDLRHN----EIYEIKVDTFQQLLSLRSLNLAWNKIAIIHP 415
Query: 485 LSF 487
+F
Sbjct: 416 NAF 418
Score = 153 (58.9 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 83/378 (21%), Positives = 151/378 (39%)
Query: 117 LELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELID 176
L+LS N + + L +L L+ L L + ++ +P F L+ L L N+L
Sbjct: 71 LDLSMNNISQLLPNPLP--SLRFLEELRLAGNALTYIPKGAFTGLYSLKVLMLQNNQL-- 126
Query: 177 LDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKP 236
V T QNL L SL L H+ + F LR L+L N L+ + A +
Sbjct: 127 RHVPTEALQNLRSLQSLRLDANHISY-VPPSCFSGLHSLRHLWLDDNALTEIPVQ-AFRS 184
Query: 237 LTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYS 296
L+ L ++L + +P F + L L + +N + L SLE LD+ Y+
Sbjct: 185 LSALQAMTLALNKIHHIPDYAFGNLSSLVVLHLHNNRIHSLGKKCFDGLHSLETLDLNYN 244
Query: 297 NLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHE 356
NL + +++LK L N + ++ F L + + + + + F
Sbjct: 245 NLDEFP-TAIRTLSNLKELGFHSNNIRSIPEKAFVGNPSLITIHFYDNPIQFVGRSAFQH 303
Query: 357 NYTYPDLEELRLSG-NPLHVLPDSTKQYSMRTI----------PTQIWKNFDFLVILFIL 405
P+L L L+G + + PD T ++ ++ P + L +L L
Sbjct: 304 ---LPELRTLTLNGASQITEFPDLTGTANLESLTLTGAQISSLPQTVCNQLPNLQVLD-L 359
Query: 406 NETVFHENYTYP---DLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNV 462
+ + + ++ L+++ L N ++ + KI + PN
Sbjct: 360 SYNLLEDLPSFSVCQKLQKIDLRHNEIYEIKVDTFQQLLSLRSLNLAWN--KIAIIHPNA 417
Query: 463 FNNTRNITSLNLANNNLS 480
F+ ++ L+L++N LS
Sbjct: 418 FSTLPSLIKLDLSSNLLS 435
Score = 124 (48.7 bits), Expect = 0.00058, P = 0.00058
Identities = 60/222 (27%), Positives = 97/222 (43%)
Query: 19 LITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRI 78
L T++LN N + A +L L + I + F +L + NP++
Sbjct: 236 LETLDLNYNNLDEFPTAIRTLSNLKELGFHSNNIRSIPEKAFVGNPSLITIHFYDNPIQF 295
Query: 79 IEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLG 138
+ F L L L LN + P N L++L L+ ++ S + T V L
Sbjct: 296 VGRSAFQHLPELRTLTLNGASQITEFPDLTGTAN-LESLTLTGAQISS-LPQT-VCNQLP 352
Query: 139 KLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNC 198
L LDL + + +LP F+ L+ ++L NE+ ++ V T Q L+ L SL+L+
Sbjct: 353 NLQVLDLSYNLLEDLPS--FSVCQKLQKIDLRHNEIYEIKVDTF--QQLLSLRSLNLAWN 408
Query: 199 HLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKL 240
+ + +AF L L LS N LS+ ++ L LT L
Sbjct: 409 KI-AIIHPNAFSTLPSLIKLDLSSNLLSSFPIT-GLHGLTHL 448
>TAIR|locus:2094613 [details] [associations]
symbol:RLP38 "receptor like protein 38" species:3702
"Arabidopsis thaliana" [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006952 "defense response" evidence=ISS] [GO:0016301 "kinase
activity" evidence=ISS] [GO:0007165 "signal transduction"
evidence=IC] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
EMBL:CP002686 GenomeReviews:BA000014_GR eggNOG:COG4886
InterPro:IPR025875 Pfam:PF12799 InterPro:IPR013210 Pfam:PF08263
EMBL:AB026655 HOGENOM:HOG000116562 IPI:IPI00522339
RefSeq:NP_188953.1 UniGene:At.65133 ProteinModelPortal:Q9LS79
SMR:Q9LS79 EnsemblPlants:AT3G23120.1 GeneID:821887
KEGG:ath:AT3G23120 TAIR:At3g23120 InParanoid:Q9LS79 OMA:YARNTSS
PhylomeDB:Q9LS79 ProtClustDB:CLSN2684197 Genevestigator:Q9LS79
Uniprot:Q9LS79
Length = 784
Score = 255 (94.8 bits), Expect = 2.9e-18, P = 2.9e-18
Identities = 93/290 (32%), Positives = 142/290 (48%)
Query: 87 LTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLR 146
L L +L L+ CNL PS+ +NL+HL L+LS N L + ++ GNL +L+ +DLR
Sbjct: 109 LQHLTHLDLSNCNLQGEIPSSIENLSHLTHLDLSTNHLVGEVPASI--GNLNQLEYIDLR 166
Query: 147 QSGI-SNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLS 205
+ + N+P + FAN T L L+L EN D+ + NL L LDLS+ H K S
Sbjct: 167 GNHLRGNIPTS-FANLTKLSLLDLHENNFTGGDIVLS---NLTSLAILDLSSNHFKSFFS 222
Query: 206 EDAFVNATKLRTLYLSGNPLSAADLSVA-LKPLTKLHRLSL-RNCGLSRLPANTFHRFTC 263
D L ++ GN S L A L ++ L ++ L +N + +
Sbjct: 223 AD-LSGLHNLEQIF--GNENSFVGLFPASLLKISSLDKIQLSQNQFEGPIDFGNTSSSSR 279
Query: 264 LQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLE 323
L LDISHN I + LS L +LE LD+ ++N + +S + K+ +L +L +S NKLE
Sbjct: 280 LTMLDISHNNFIGRVPSSLSKLVNLELLDLSHNNFRGLSPRSISKLVNLTSLDISYNKLE 339
Query: 324 TLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPL 373
++L ++L++ L ++V E L L L N L
Sbjct: 340 GQVPYFIWKPSNLQSVDLSHNSFFDLGKSV--EVVNGAKLVGLNLGSNSL 387
Score = 172 (65.6 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 110/480 (22%), Positives = 201/480 (41%)
Query: 19 LITINLNANPIQPVEGAFLVA-RSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLR 77
L ++L++N + A L +L ++ E + + P +++L+K+ LS N
Sbjct: 207 LAILDLSSNHFKSFFSADLSGLHNLEQIFGNENSFVGLFPASLLKISSLDKIQLSQNQFE 266
Query: 78 -IIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGN 136
I+ G + L L ++ N PS+ L +L+ L+LS N + ++
Sbjct: 267 GPIDFGNTSSSSRLTMLDISHNNFIGRVPSSLSKLVNLELLDLSHNNFRGLSPRSI--SK 324
Query: 137 LGKLDTLDLRQSGISN-LPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDL 195
L L +LD+ + + +P ++ + L++++L+ N DL + + N L L+L
Sbjct: 325 LVNLTSLDISYNKLEGQVPYFIWKPSN-LQSVDLSHNSFFDLGKSVEV-VNGAKLVGLNL 382
Query: 196 SNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPA 255
+ L+GP+ + N + L LS N + + + LK T + L+LRN LS
Sbjct: 383 GSNSLQGPIPQ-WICNFRFVFFLDLSDNRFTGS-IPQCLKNSTDFNTLNLRNNSLSGFLP 440
Query: 256 NTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTL 315
T L+ LD+S+N + L + +E L++ + ++ SL L
Sbjct: 441 ELCMDSTMLRSLDVSYNNFVGKLPKSLMNCQDMEFLNVRGNKIKDTFPFWLGSRKSLMVL 500
Query: 316 ILSGNKL--ETLESGLFQNLTHLSVLEL-NNCGLTRLNETVFH---ENYTYPDLEELRLS 369
+L N S + LS++++ NN + L + F E T D+ L +
Sbjct: 501 VLRSNAFYGPVYNSTTYLGFPRLSIIDISNNDFVGSLPQDYFANWTEMATVWDINRLNYA 560
Query: 370 GNPLHVLPDSTKQYS-MRTIPTQ--IWKNF----DFLVILFILNETVFHENYTYPDLEEL 422
N T QY ++TI + NF D + + + +T F N + + +
Sbjct: 561 RNT----SSRTIQYGGLQTIQRSNYVGDNFNMHADSMDLAYKGVDTDF--NRIFRGFKVI 614
Query: 423 RLSGNPL--HVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNLS 480
SGN H+ P +PP++ N T N+ +L+L+ NNLS
Sbjct: 615 DFSGNRFSGHI-P--RSIGLLSELLHLNLSGNAFTGNIPPSLANIT-NLETLDLSRNNLS 670
Score = 161 (61.7 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 107/441 (24%), Positives = 177/441 (40%)
Query: 66 LNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLK 125
L LD+S N P L +LE L L+ N +SP + L +L +L++S NKL+
Sbjct: 280 LTMLDISHNNFIGRVPSSLSKLVNLELLDLSHNNFRGLSPRSISKLVNLTSLDISYNKLE 339
Query: 126 SHIDWTLVLGNLGKLDTLDLRQSGISNLPDNV-FANNTWLRNLNLAENELIDLDVATTLG 184
+ + + L ++DL + +L +V N L LNL N L + +
Sbjct: 340 GQVPY--FIWKPSNLQSVDLSHNSFFDLGKSVEVVNGAKLVGLNLGSNSLQG-PIPQWIC 396
Query: 185 QNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLS 244
N + LDLS+ G + + N+T TL L N LS L T L L
Sbjct: 397 -NFRFVFFLDLSDNRFTGSIPQ-CLKNSTDFNTLNLRNNSLSGF-LPELCMDSTMLRSLD 453
Query: 245 LR-NCGLSRLPANTFHRFTC--LQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQR- 300
+ N + +LP + + C ++ L++ N + D F L +SL L + +
Sbjct: 454 VSYNNFVGKLPKSLMN---CQDMEFLNVRGNKIKDTFPFWLGSRKSLMVLVLRSNAFYGP 510
Query: 301 -ISRSTFLKMTSLKTLILSGNK-LETLESGLFQNLTHLS-VLELNNCGLTRLNETVFHEN 357
+ +T+L L + +S N + +L F N T ++ V ++N R +
Sbjct: 511 VYNSTTYLGFPRLSIIDISNNDFVGSLPQDYFANWTEMATVWDINRLNYARNTSS---RT 567
Query: 358 YTYPDLEELRLS---GNPLHVLPDSTKQYSMRTIPTQIWKNF-DFLVILFILNETVFHEN 413
Y L+ ++ S G+ ++ DS + + + T + F F VI F N H
Sbjct: 568 IQYGGLQTIQRSNYVGDNFNMHADSM-DLAYKGVDTDFNRIFRGFKVIDFSGNRFSGHIP 626
Query: 414 YTYPDLEEL---RLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLP--PNVFNNTRN 468
+ L EL LSGN TGN + + P N
Sbjct: 627 RSIGLLSELLHLNLSGNAF----TGNIPPSLANITNLETLDLSRNNLSGEIPRSLGNLSF 682
Query: 469 ITSLNLANNNLSMTSELSFQF 489
++++N ++N+L S QF
Sbjct: 683 LSNINFSHNHLQGFVPRSTQF 703
Score = 145 (56.1 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 77/304 (25%), Positives = 131/304 (43%)
Query: 22 INLNANPIQ---PVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRI 78
I+L N ++ P A L SLL L+ T I +NLT+L LDLS N +
Sbjct: 163 IDLRGNHLRGNIPTSFANLTKLSLLDLHENNFTGGDI---VLSNLTSLAILDLSSNHFKS 219
Query: 79 IEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLG 138
L +LE + N + + P++ ++ L ++LSQN+ + ID+ +
Sbjct: 220 FFSADLSGLHNLEQIFGNENSFVGLFPASLLKISSLDKIQLSQNQFEGPIDFGNTSSS-S 278
Query: 139 KLDTLDLRQSG-ISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSN 197
+L LD+ + I +P ++ + L L+L+ N L + LV+L SLD+S
Sbjct: 279 RLTMLDISHNNFIGRVPSSL-SKLVNLELLDLSHNNFRGLSPRSI--SKLVNLTSLDISY 335
Query: 198 CHLKGPLSEDAFV-NATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPAN 256
L+G + F+ + L+++ LS N SV + KL L+L + L
Sbjct: 336 NKLEGQVPY--FIWKPSNLQSVDLSHNSFFDLGKSVEVVNGAKLVGLNLGSNSLQGPIPQ 393
Query: 257 TFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLI 316
F + LD+S N + L L++ ++L + T L++L
Sbjct: 394 WICNFRFVFFLDLSDNRFTGSIPQCLKNSTDFNTLNLRNNSLSGFLPELCMDSTMLRSLD 453
Query: 317 LSGN 320
+S N
Sbjct: 454 VSYN 457
Score = 142 (55.0 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 76/303 (25%), Positives = 129/303 (42%)
Query: 83 VFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDT 142
+ + SL+ L+ + + S SA L HL L+LS L+ I ++ NL L
Sbjct: 81 ILGEVISLKLYFLSTASTSLKSSSALFKLQHLTHLDLSNCNLQGEIPSSIE--NLSHLTH 138
Query: 143 LDLRQSG-ISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLK 201
LDL + + +P ++ N L ++L N L ++ T+ NL L LDL +
Sbjct: 139 LDLSTNHLVGEVPASI-GNLNQLEYIDLRGNHLRG-NIPTSFA-NLTKLSLLDLHENNFT 195
Query: 202 GPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRL-SLRNCGLSRLPANTFHR 260
G + N T L L LS N + S L L L ++ N + PA+ +
Sbjct: 196 G--GDIVLSNLTSLAILDLSSNHFKSF-FSADLSGLHNLEQIFGNENSFVGLFPASLL-K 251
Query: 261 FTCLQELDISHNPLIDAFT-ALLSPLESLEHLDMGYSN-LQRISRSTFLKMTSLKTLILS 318
+ L ++ +S N S L LD+ ++N + R+ S+ K+ +L+ L LS
Sbjct: 252 ISSLDKIQLSQNQFEGPIDFGNTSSSSRLTMLDISHNNFIGRVP-SSLSKLVNLELLDLS 310
Query: 319 GNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPD 378
N L L +L+ L+++ +L V + + +L+ + LS N L
Sbjct: 311 HNNFRGLSPRSISKLVNLTSLDIS---YNKLEGQVPYFIWKPSNLQSVDLSHNSFFDLGK 367
Query: 379 STK 381
S +
Sbjct: 368 SVE 370
Score = 137 (53.3 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 78/299 (26%), Positives = 126/299 (42%)
Query: 57 PQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKT 116
P NL L +DL GN LR P F LT L L L+ N T NL L
Sbjct: 151 PASIGNLNQLEYIDLRGNHLRGNIPTSFANLTKLSLLDLHENNFTG-GDIVLSNLTSLAI 209
Query: 117 LELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNL-PDNVFANNTWLRNLNLAENELI 175
L+LS N KS ++ L L L+ + ++ L P ++ ++ L + L++N+
Sbjct: 210 LDLSSNHFKSF--FSADLSGLHNLEQIFGNENSFVGLFPASLLKISS-LDKIQLSQNQFE 266
Query: 176 D-LDVATTLGQNLVHLDSLDLSNCHLKG--PLSEDAFVNATKLRTLYLSGNPLSAADLSV 232
+D T + L LD+S+ + G P S VN L L LS N +
Sbjct: 267 GPIDFGNTSSSS--RLTMLDISHNNFIGRVPSSLSKLVN---LELLDLSHNNFRG----L 317
Query: 233 ALKPLTKLHRLSLRNCGLSRLPANTFH---RFTCLQELDISHNPLIDAFTAL-LSPLESL 288
+ + ++KL L+ + ++L + + + LQ +D+SHN D ++ + L
Sbjct: 318 SPRSISKLVNLTSLDISYNKLEGQVPYFIWKPSNLQSVDLSHNSFFDLGKSVEVVNGAKL 377
Query: 289 EHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLT 347
L++G ++LQ + L LS N+ +N T + L L N L+
Sbjct: 378 VGLNLGSNSLQGPIPQWICNFRFVFFLDLSDNRFTGSIPQCLKNSTDFNTLNLRNNSLS 436
Score = 127 (49.8 bits), Expect = 0.00023, P = 0.00023
Identities = 41/147 (27%), Positives = 68/147 (46%)
Query: 197 NCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPAN 256
+C G ++ DA + LY ++ S AL L L L L NC L +
Sbjct: 69 DCCSWGGVTCDAILGEVISLKLYFLSTASTSLKSSSALFKLQHLTHLDLSNCNLQGEIPS 128
Query: 257 TFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLI 316
+ + L LD+S N L+ A + L LE++D+ ++L+ ++F +T L L
Sbjct: 129 SIENLSHLTHLDLSTNHLVGEVPASIGNLNQLEYIDLRGNHLRGNIPTSFANLTKLSLLD 188
Query: 317 LSGNKLETLESGLFQNLTHLSVLELNN 343
L N T + NLT L++L+L++
Sbjct: 189 LHENNF-TGGDIVLSNLTSLAILDLSS 214
>UNIPROTKB|Q96JA1 [details] [associations]
symbol:LRIG1 "Leucine-rich repeats and immunoglobulin-like
domains protein 1" species:9606 "Homo sapiens" [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR001611
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
CleanEx:HS_LIG1 Pfam:PF01463 EMBL:AF381545 EMBL:AB050468
EMBL:BC071561 EMBL:BC014276 EMBL:AL117666 IPI:IPI00000775
IPI:IPI00470372 PIR:T17346 RefSeq:NP_056356.2 UniGene:Hs.518055
ProteinModelPortal:Q96JA1 SMR:Q96JA1 IntAct:Q96JA1 STRING:Q96JA1
PhosphoSite:Q96JA1 DMDM:143811415 PaxDb:Q96JA1 PRIDE:Q96JA1
Ensembl:ENST00000273261 Ensembl:ENST00000383703 GeneID:26018
KEGG:hsa:26018 UCSC:uc003dmw.3 UCSC:uc010hoa.3 CTD:26018
GeneCards:GC03M066511 H-InvDB:HIX0003431 HGNC:HGNC:17360 MIM:608868
neXtProt:NX_Q96JA1 PharmGKB:PA38450 HOGENOM:HOG000113380
HOVERGEN:HBG052353 InParanoid:Q96JA1 OMA:ESNGVCP OrthoDB:EOG48PMJN
PhylomeDB:Q96JA1 ChiTaRS:LRIG1 GenomeRNAi:26018 NextBio:47784
Bgee:Q96JA1 CleanEx:HS_LRIG1 Genevestigator:Q96JA1
GermOnline:ENSG00000144749 Uniprot:Q96JA1
Length = 1093
Score = 268 (99.4 bits), Expect = 3.4e-18, Sum P(2) = 3.4e-18
Identities = 98/386 (25%), Positives = 187/386 (48%)
Query: 19 LITINLNANPIQPVEGAFLVAR-SLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLR 77
++++ L N I+ VEG+ L A SL L + ++++ F + + +L+L+GN +
Sbjct: 117 VVSLFLQHNKIRSVEGSQLKAYLSLEVLDLSLNNITEVRNTCFPHGPPIKELNLAGNRIG 176
Query: 78 IIEPGVFDPLT-SLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGN 136
+E G FD L+ SL L L++ +T + AF L L L+L++N+++ I+ L
Sbjct: 177 TLELGAFDGLSRSLLTLRLSKNRITQLPVRAF-KLPRLTQLDLNRNRIRL-IEG-LTFQG 233
Query: 137 LGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLS 196
L L+ L L+++ IS L D F + + L+L N L++++ + G +H L LS
Sbjct: 234 LNSLEVLKLQRNNISKLTDGAFWGLSKMHVLHLEYNSLVEVNSGSLYGLTALH--QLHLS 291
Query: 197 NCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPAN 256
N + + + KL L LS N L+ D +L L+ L L L + +S +
Sbjct: 292 NNSI-ARIHRKGWSFCQKLHELVLSFNNLTRLD-EESLAELSSLSVLRLSHNSISHIAEG 349
Query: 257 TFHRFTCLQELDISHNPL---IDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLK 313
F L+ LD+ HN + I+ + S L+SL L + + ++ +++ F + L+
Sbjct: 350 AFKGLRSLRVLDLDHNEISGTIEDTSGAFSGLDSLSKLTLFGNKIKSVAKRAFSGLEGLE 409
Query: 314 TLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPL 373
L L GN + +++ F + +L L +++ + + + + + ++
Sbjct: 410 HLNLGGNAIRSVQFDAFVKMKNLKELHISSDSFLCDCQLKWLPPWLIGRMLQAFVTATCA 469
Query: 374 HVLPDSTKQYSMRTIPTQIWKNFDFL 399
H P+S K S+ ++P + + DFL
Sbjct: 470 H--PESLKGQSIFSVPPESFVCDDFL 493
Score = 226 (84.6 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 83/304 (27%), Positives = 146/304 (48%)
Query: 69 LDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHI 128
L+LS N L I+P F+ L +L+ + LN LT + PS +H+ +L L NK++S +
Sbjct: 73 LNLSYNKLSEIDPAGFEDLPNLQEVYLNNNELTAV-PSLGAASSHVVSLFLQHNKIRS-V 130
Query: 129 DWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLV 188
+ + + L L+ LDL + I+ + + F + ++ LNLA N + L++ G +
Sbjct: 131 EGSQLKAYLS-LEVLDLSLNNITEVRNTCFPHGPPIKELNLAGNRIGTLELGAFDGLSRS 189
Query: 189 HLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNC 248
L +L LS + L AF +L L L+ N + + + + L L L L+
Sbjct: 190 LL-TLRLSKNRIT-QLPVRAF-KLPRLTQLDLNRNRIRLIE-GLTFQGLNSLEVLKLQRN 245
Query: 249 GLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLK 308
+S+L F + + L + +N L++ + L L +L L + +++ RI R +
Sbjct: 246 NISKLTDGAFWGLSKMHVLHLEYNSLVEVNSGSLYGLTALHQLHLSNNSIARIHRKGWSF 305
Query: 309 MTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFH--ENYTYPDLEEL 366
L L+LS N L L+ L+ LSVL L++ ++ + E F + DL+
Sbjct: 306 CQKLHELVLSFNNLTRLDEESLAELSSLSVLRLSHNSISHIAEGAFKGLRSLRVLDLDHN 365
Query: 367 RLSG 370
+SG
Sbjct: 366 EISG 369
Score = 195 (73.7 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 87/361 (24%), Positives = 144/361 (39%)
Query: 15 DNPGLITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGN 74
D P L + LN N + V + ++ L++Q + + +L LDLS N
Sbjct: 90 DLPNLQEVYLNNNELTAVPSLGAASSHVVSLFLQHNKIRSVEGSQLKAYLSLEVLDLSLN 149
Query: 75 PLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNH-LKTLELSQNKLKSHIDWTLV 133
+ + F ++ L L + + AFD L+ L TL LS+N++ +
Sbjct: 150 NITEVRNTCFPHGPPIKELNLAGNRIGTLELGAFDGLSRSLLTLRLSKNRITQ---LPVR 206
Query: 134 LGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSL 193
L +L LDL ++ I + F L L L N + L G + +H+ L
Sbjct: 207 AFKLPRLTQLDLNRNRIRLIEGLTFQGLNSLEVLKLQRNNISKLTDGAFWGLSKMHVLHL 266
Query: 194 DLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRL 253
+ ++ ++ + T L L+LS N ++ KLH L L L+RL
Sbjct: 267 EYNSLV---EVNSGSLYGLTALHQLHLSNNSIARIHRK-GWSFCQKLHELVLSFNNLTRL 322
Query: 254 PANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRST---FLKMT 310
+ + L L +SHN + L SL LD+ ++ + T F +
Sbjct: 323 DEESLAELSSLSVLRLSHNSISHIAEGAFKGLRSLRVLDLDHNEISGTIEDTSGAFSGLD 382
Query: 311 SLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSG 370
SL L L GNK++++ F L L L N G + F +L+EL +S
Sbjct: 383 SLSKLTLFGNKIKSVAKRAFSGLEGLEHL---NLGGNAIRSVQFDAFVKMKNLKELHISS 439
Query: 371 N 371
+
Sbjct: 440 D 440
Score = 186 (70.5 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 81/324 (25%), Positives = 137/324 (42%)
Query: 52 LSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNL 111
LS+I+P F +L L ++ L+ N L + P + + + L L + + S
Sbjct: 80 LSEIDPAGFEDLPNLQEVYLNNNELTAV-PSLGAASSHVVSLFLQHNKIRSVEGSQLKAY 138
Query: 112 NHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFAN-NTWLRNLNLA 170
L+ L+LS N + + G + L+L + I L F + L L L+
Sbjct: 139 LSLEVLDLSLNNITEVRNTCFPHGP--PIKELNLAGNRIGTLELGAFDGLSRSLLTLRLS 196
Query: 171 ENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSED-AFVNATKLRTLYLSGNPLSAAD 229
+N + L V L L LDL+ ++ L E F L L L N +S
Sbjct: 197 KNRITQLPVRAF---KLPRLTQLDLNRNRIR--LIEGLTFQGLNSLEVLKLQRNNISKLT 251
Query: 230 LSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLE 289
A L+K+H L L L + + + + T L +L +S+N + S + L
Sbjct: 252 -DGAFWGLSKMHVLHLEYNSLVEVNSGSLYGLTALHQLHLSNNSIARIHRKGWSFCQKLH 310
Query: 290 HLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRL 349
L + ++NL R+ + +++SL L LS N + + G F+ L L VL+L++ ++
Sbjct: 311 ELVLSFNNLTRLDEESLAELSSLSVLRLSHNSISHIAEGAFKGLRSLRVLDLDHNEISGT 370
Query: 350 NETVFHENYTYPDLEELRLSGNPL 373
E L +L L GN +
Sbjct: 371 IEDTSGAFSGLDSLSKLTLFGNKI 394
Score = 177 (67.4 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 76/246 (30%), Positives = 109/246 (44%)
Query: 17 PGLITINLNANPIQPVEG-AFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNP 75
P L ++LN N I+ +EG F SL L +Q +SK+ F L+ ++ L L N
Sbjct: 211 PRLTQLDLNRNRIRLIEGLTFQGLNSLEVLKLQRNNISKLTDGAFWGLSKMHVLHLEYNS 270
Query: 76 LRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLG 135
L + G LT+L L L+ ++ I + L L LS N L + +D L
Sbjct: 271 LVEVNSGSLYGLTALHQLHLSNNSIARIHRKGWSFCQKLHELVLSFNNL-TRLDEES-LA 328
Query: 136 NLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLG--QNLVHLDSL 193
L L L L + IS++ + F LR L+L NE I + T G L L L
Sbjct: 329 ELSSLSVLRLSHNSISHIAEGAFKGLRSLRVLDLDHNE-ISGTIEDTSGAFSGLDSLSKL 387
Query: 194 DLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAA--DLSVALKPLTKLHRLS---LRNC 248
L +K +++ AF L L L GN + + D V +K L +LH S L +C
Sbjct: 388 TLFGNKIKS-VAKRAFSGLEGLEHLNLGGNAIRSVQFDAFVKMKNLKELHISSDSFLCDC 446
Query: 249 GLSRLP 254
L LP
Sbjct: 447 QLKWLP 452
Score = 139 (54.0 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 57/218 (26%), Positives = 106/218 (48%)
Query: 141 DTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHL 200
D+LD G++ LP ++ +W R+LNL+ N+L ++D A ++L +L + L+N L
Sbjct: 50 DSLDCGGRGLAALPGDL---PSWTRSLNLSYNKLSEIDPAGF--EDLPNLQEVYLNNNEL 104
Query: 201 KGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHR 260
S A ++ + +L+L N + + + S LK L L L ++ + F
Sbjct: 105 TAVPSLGAA--SSHVVSLFLQHNKIRSVEGS-QLKAYLSLEVLDLSLNNITEVRNTCFPH 161
Query: 261 FTCLQELDISHNPL----IDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLI 316
++EL+++ N + + AF L SL L + + + ++ F K+ L L
Sbjct: 162 GPPIKELNLAGNRIGTLELGAFDGLS---RSLLTLRLSKNRITQLPVRAF-KLPRLTQLD 217
Query: 317 LSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVF 354
L+ N++ +E FQ L L VL+L +++L + F
Sbjct: 218 LNRNRIRLIEGLTFQGLNSLEVLKLQRNNISKLTDGAF 255
Score = 38 (18.4 bits), Expect = 3.4e-18, Sum P(2) = 3.4e-18
Identities = 10/38 (26%), Positives = 22/38 (57%)
Query: 640 KSFLTLGNFGLISVGVIILSAMVYFSFYARHLYRTKQQ 677
K T+G F + V I+L+++V+ +Y+T+++
Sbjct: 788 KDGTTVGIFTIAVVSSIVLTSLVWVCI----IYQTRKK 821
>FB|FBgn0033250 [details] [associations]
symbol:CG14762 species:7227 "Drosophila melanogaster"
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
InterPro:IPR001611 PROSITE:PS51450 EMBL:AE013599 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 GeneTree:ENSGT00700000104056
EMBL:AY060601 RefSeq:NP_610346.1 UniGene:Dm.3950 SMR:Q7K2X5
EnsemblMetazoa:FBtr0088867 GeneID:35768 KEGG:dme:Dmel_CG14762
UCSC:CG14762-RA FlyBase:FBgn0033250 InParanoid:Q7K2X5
OrthoDB:EOG4N8PM4 GenomeRNAi:35768 NextBio:795128 Uniprot:Q7K2X5
Length = 470
Score = 247 (92.0 bits), Expect = 6.5e-18, P = 6.5e-18
Identities = 99/390 (25%), Positives = 188/390 (48%)
Query: 16 NPGLITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTT-LNKLDLSGN 74
+P + + L N + ++G +A + +L + +L+ I ++L L +LD+S N
Sbjct: 80 SPIIFYLKLRHNNLPKLQGFVFLALDIRHLTIHNSSLAAIEENALSSLGAGLTQLDVSLN 139
Query: 75 PLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVL 134
++ + L L L LN +T I +AF+ L L+ L L +NK+ + ID
Sbjct: 140 QMKTVPSQALQHLFHLLILNLNHNKITVIHNNAFEGLETLEILTLYENKI-TQIDPEAFR 198
Query: 135 GNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLD 194
G + L+L + ++N+P + + L+ L + EN++ + G L LDSL
Sbjct: 199 GLEDHIKRLNLGGNDLTNIPQKALSILSTLKKLEIQENKIRTISEGDFEG--LQSLDSLI 256
Query: 195 LSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTK-LHRLSLRNCGLSRL 253
L++ ++ + + F + T L +L L GN +S D A K L + L L L + + +
Sbjct: 257 LAH-NMITTVPANVFSHLTLLNSLELEGNKISVIDKD-AFKGLEENLQYLRLGDNQIHTI 314
Query: 254 PANTFHRFTCLQELDISHNPLI----DAFTALLSPLESLEHLDMGYSNLQRISRSTFLKM 309
P+ L+ LD+ +N + DAFT +SL L++ ++++ + F +
Sbjct: 315 PSEALRPLHRLRHLDLRNNNINVLAEDAFTGFG---DSLTFLNLQKNDIKVLPSLLFENL 371
Query: 310 TSLKTLILSGNKLETLESGLFQNLTH-LSVLE-----LN-NCGLTRLNETVFHENYTYPD 362
SL+TL L NKL+ + + + + L +++ LN +C LT + + E+ D
Sbjct: 372 NSLETLNLQNNKLQRIPQDIMEPVIDTLRIIDITDNPLNCSCELTWFPKLL--EDLKNKD 429
Query: 363 LEELRLSGNPL-HVLPDSTKQYSMRTIPTQ 391
+E+ PL H+ D+ ++Y ++ +PT+
Sbjct: 430 -DEMSQKKKPLCHMSLDN-REYFVQAMPTE 457
Score = 146 (56.5 bits), Expect = 9.4e-07, P = 9.4e-07
Identities = 85/340 (25%), Positives = 147/340 (43%)
Query: 110 NLNHLKTLELSQNKLKSHIDWTLVL--GNLGKLD-----TLDLRQSGISN-----LPDNV 157
+L H+ T + K KS I + L L NL KL LD+R I N + +N
Sbjct: 65 DLAHI-TKSMGTLKGKSPIIFYLKLRHNNLPKLQGFVFLALDIRHLTIHNSSLAAIEENA 123
Query: 158 FAN-NTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLR 216
++ L L+++ N++ V + Q+L HL L+L++ + + +AF L
Sbjct: 124 LSSLGAGLTQLDVSLNQM--KTVPSQALQHLFHLLILNLNHNKIT-VIHNNAFEGLETLE 180
Query: 217 TLYLSGNPLSAADLSVALKPLTK-LHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLI 275
L L N ++ D A + L + RL+L L+ +P + L++L+I N +
Sbjct: 181 ILTLYENKITQIDPE-AFRGLEDHIKRLNLGGNDLTNIPQKALSILSTLKKLEIQENKIR 239
Query: 276 DAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLT- 334
L+SL+ L + ++ + + + F +T L +L L GNK+ ++ F+ L
Sbjct: 240 TISEGDFEGLQSLDSLILAHNMITTVPANVFSHLTLLNSLELEGNKISVIDKDAFKGLEE 299
Query: 335 HLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLP-DSTKQYSMRTIPTQIW 393
+L L L + + + + L L L N ++VL D+ + +
Sbjct: 300 NLQYLRLGDNQIHTIPSEALRPLHR---LRHLDLRNNNINVLAEDAFTGFGDSLTFLNLQ 356
Query: 394 KNFDFLVILFILNETVFHENYTYPDLEELRLSGNPLHVLP 433
KN D V+ +L E + N LE L L N L +P
Sbjct: 357 KN-DIKVLPSLLFENL---N----SLETLNLQNNKLQRIP 388
Score = 133 (51.9 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 80/318 (25%), Positives = 129/318 (40%)
Query: 167 LNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVN-ATKLRTLYLSGNPL 225
L L N L L L ++ HL + N L + E+A + L L +S N +
Sbjct: 86 LKLRHNNLPKLQGFVFLALDIRHLT---IHNSSLAA-IEENALSSLGAGLTQLDVSLNQM 141
Query: 226 SAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPL 285
S AL+ L L L+L + ++ + N F L+ L + N + L
Sbjct: 142 KTVP-SQALQHLFHLLILNLNHNKITVIHNNAFEGLETLEILTLYENKITQIDPEAFRGL 200
Query: 286 ES-LEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNC 344
E ++ L++G ++L I + +++LK L + NK+ T+ G F+ L L L L +
Sbjct: 201 EDHIKRLNLGGNDLTNIPQKALSILSTLKKLEIQENKIRTISEGDFEGLQSLDSLILAHN 260
Query: 345 GLTRLNETVFHENYTYPDLEELRLSGNPLHVLP-DSTKQYSMRTIPTQIWKNFDFLVILF 403
+T + VF + T L L L GN + V+ D+ K ++ N I
Sbjct: 261 MITTVPANVF-SHLTL--LNSLELEGNKISVIDKDAFKGLEENLQYLRLGDN----QIHT 313
Query: 404 ILNETV--FHENYTYPDLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPN 461
I +E + H L L L N ++VL + I LP
Sbjct: 314 IPSEALRPLHR------LRHLDLRNNNINVLAE-DAFTGFGDSLTFLNLQKNDIKVLPSL 366
Query: 462 VFNNTRNITSLNLANNNL 479
+F N ++ +LNL NN L
Sbjct: 367 LFENLNSLETLNLQNNKL 384
>RGD|1562655 [details] [associations]
symbol:Tlr13 "toll-like receptor 13" species:10116 "Rattus
norvegicus" [GO:0002237 "response to molecule of bacterial origin"
evidence=IEA] [GO:0002755 "MyD88-dependent toll-like receptor
signaling pathway" evidence=IEA;ISO] [GO:0004888 "transmembrane
signaling receptor activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005768 "endosome" evidence=ISO] [GO:0009615
"response to virus" evidence=ISO] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IEA;ISO] [GO:0034178 "toll-like receptor 13 signaling
pathway" evidence=IEA;ISO] [GO:0042803 "protein homodimerization
activity" evidence=ISO] [GO:0043408 "regulation of MAPK cascade"
evidence=ISO] [GO:0045087 "innate immune response"
evidence=IEA;ISO] Pfam:PF00560 InterPro:IPR000157
InterPro:IPR001611 InterPro:IPR027196 Pfam:PF01582 PROSITE:PS50104
PROSITE:PS51450 SMART:SM00255 RGD:1562655 GO:GO:0007165
InterPro:IPR003591 SMART:SM00369 GO:GO:0005622 SUPFAM:SSF52200
PANTHER:PTHR24367:SF26 IPI:IPI00362009 Ensembl:ENSRNOT00000038868
Uniprot:F1LYZ1
Length = 987
Score = 253 (94.1 bits), Expect = 7.0e-18, P = 7.0e-18
Identities = 110/380 (28%), Positives = 164/380 (43%)
Query: 20 ITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRII 79
+ + N++ + + F SL L + +C LS I+ + +++L L LDLS N +
Sbjct: 372 LDLGQNSDLVHLNDSEFNALPSLQRLNLNKCQLSFISNKTWSSLQNLTILDLSHNKFKSF 431
Query: 80 EPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGK 139
F PL LE+L L+R +T ++ AF L LK L L+ + + ID
Sbjct: 432 PDFAFSPLKRLEFLSLSRNPITELNNLAFSGLFSLKELNLAACWIVT-ID-RYSFTQFPN 489
Query: 140 LDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCH 199
L+ LDL + I L F L L L+ N L ++ G L L LDL
Sbjct: 490 LEVLDLGDNNIRTLNHGTFQPLKKLHTLILSHNRLEIMESNAFSG--LTGLRYLDLMYNS 547
Query: 200 LKGPLSEDAFVNATKLRTLYLSGNPLS-AADLSVALKPLTKLHRLSLRNC-----GLSRL 253
L + F+ KL L L N ++ ++ P KL L N G+ +
Sbjct: 548 LSY-FHKHHFMGLEKLLVLKLGFNKITYETTRTLQYPPFMKLKSLKQLNLEGQKHGIQVV 606
Query: 254 PANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDM-GYSNLQR---ISRSTFLKM 309
P N F + LQEL + NP + PL +L LD+ G + R ++ S F +
Sbjct: 607 PRNFFQGLSSLQELLLGKNPSVFLDHHQFDPLINLTKLDISGTKDGDRSLYLNSSLFQNL 666
Query: 310 TSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLS 369
LK L L N LE+L G+F +L +L V L L +N++ EN L +
Sbjct: 667 KRLKVLRLENNNLESLVPGMFSSLQNLQVFSLRFNNLKVINQSHL-ENLK--SLMFFDVY 723
Query: 370 GNPLHVLPDST--KQYSMRT 387
GN L D+ K +SM T
Sbjct: 724 GNKLQCTCDNLWFKNWSMNT 743
Score = 236 (88.1 bits), Expect = 4.9e-16, P = 4.9e-16
Identities = 136/543 (25%), Positives = 230/543 (42%)
Query: 17 PGLITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFT-NLTTLNKLDLSGNP 75
P L ++L N I ++ + SL +L + L+++N F T +L L L S N
Sbjct: 220 PCLEHLDLINNSIMYLDHSPRSLVSLTHLSFEGNNLTELN--FSTLSLPNLTNLSASQNG 277
Query: 76 LRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLK-SHIDWTLV- 133
+I+ L L+ L L+ + SA +L +++ ++LS +LK H++ +V
Sbjct: 278 HGVIQDVYLKTLPQLQSLNLSGTVVKLEMLSA-KHLQNVRVMDLSNRELKHGHLNMKIVC 336
Query: 134 --LGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAEN-ELIDLDVATTLGQNLVHL 190
L NL L+ L ++ + A T L L+L +N +L+ L+ + L L
Sbjct: 337 YLLRNLPMLEILFFHKNATNAEGIKQLAKCTRLLFLDLGQNSDLVHLNDSEF--NALPSL 394
Query: 191 DSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGL 250
L+L+ C L +S + + L L LS N + A PL +L LSL +
Sbjct: 395 QRLNLNKCQLSF-ISNKTWSSLQNLTILDLSHNKFKSFP-DFAFSPLKRLEFLSLSRNPI 452
Query: 251 SRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMT 310
+ L F L+EL+++ ++ + +LE LD+G +N++ ++ TF +
Sbjct: 453 TELNNLAFSGLFSLKELNLAACWIVTIDRYSFTQFPNLEVLDLGDNNIRTLNHGTFQPLK 512
Query: 311 SLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEEL---R 367
L TLILS N+LE +ES F LT L L+L L+ FH+++ + LE+L +
Sbjct: 513 KLHTLILSHNRLEIMESNAFSGLTGLRYLDLMYNSLS-----YFHKHH-FMGLEKLLVLK 566
Query: 368 LSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNET-VFHENYTY--PDLEELRL 424
L N + T QY P K+ L + + V N+ L+EL L
Sbjct: 567 LGFNKITYETTRTLQYP----PFMKLKSLKQLNLEGQKHGIQVVPRNFFQGLSSLQELLL 622
Query: 425 SGNPLHVLPTGNXX--XXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNLSMT 482
NP L + YL ++F N + + L L NNNL
Sbjct: 623 GKNPSVFLDHHQFDPLINLTKLDISGTKDGDRSLYLNSSLFQNLKRLKVLRLENNNLE-- 680
Query: 483 SELSFQFXXXXXXXXXXXXXXXXXTHISPTVLRHNRAITSIKLVGNPWKCDCNIADMW-- 540
S + F I+ + L + +++ + GN +C C+ ++W
Sbjct: 681 SLVPGMFSSLQNLQVFSLRFNNLKV-INQSHLENLKSLMFFDVYGNKLQCTCD--NLWFK 737
Query: 541 EWA 543
W+
Sbjct: 738 NWS 740
Score = 207 (77.9 bits), Expect = 6.9e-13, P = 6.9e-13
Identities = 123/480 (25%), Positives = 213/480 (44%)
Query: 15 DNPGLIT-INLNANPIQPVEG-AFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLS 72
D P T +NL N IQ + +F +L+ L ++ + KI+ F L L L+L
Sbjct: 96 DIPRYTTHLNLTNNYIQVLPPWSFTNLSALVDLRLEWNLIWKIDEGAFRGLENLTLLNLV 155
Query: 73 GNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTL 132
N ++ + F+ L++LE L+L+ +T+I AF L LK L LS+N++ +
Sbjct: 156 ENKIQSVNNS-FEGLSNLETLLLSHNQITHIHKDAFTPLVKLKYLSLSRNRISNFSGILE 214
Query: 133 VLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDS 192
+ +L L+ LDL + I L D+ + L +L+ N L +L+ +T NL +L +
Sbjct: 215 AVQHLPCLEHLDLINNSIMYL-DHSPRSLVSLTHLSFEGNNLTELNFSTLSLPNLTNLSA 273
Query: 193 LDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSR 252
N H G + + +L++L LSG + LS K L + + L N L
Sbjct: 274 SQ--NGH--GVIQDVYLKTLPQLQSLNLSGTVVKLEMLSA--KHLQNVRVMDLSNRELKH 327
Query: 253 LPANTFHRFTC-----LQELDIS--HNPLIDAF-TALLSPLESLEHLDMGY-SNLQRISR 303
N + C L L+I H +A L+ L LD+G S+L ++
Sbjct: 328 GHLNM--KIVCYLLRNLPMLEILFFHKNATNAEGIKQLAKCTRLLFLDLGQNSDLVHLND 385
Query: 304 STFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDL 363
S F + SL+ L L+ +L + + + +L +L++L+L++ + F L
Sbjct: 386 SEFNALPSLQRLNLNKCQLSFISNKTWSSLQNLTILDLSHNKFKSFPDFAFSP---LKRL 442
Query: 364 EELRLSGNPLHVLPDSTKQ--YSMRTIPTQIWKNFDFLVILFILNETVFHENYT-YPDLE 420
E L LS NP+ L + +S++ + N L +I+ T+ ++T +P+LE
Sbjct: 443 EFLSLSRNPITELNNLAFSGLFSLKEL------N---LAACWIV--TIDRYSFTQFPNLE 491
Query: 421 ELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNLS 480
L L N + L G +++ + N F+ + L+L N+LS
Sbjct: 492 VLDLGDNNIRTLNHGTFQPLKKLHTLILSHN--RLEIMESNAFSGLTGLRYLDLMYNSLS 549
Score = 154 (59.3 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 80/283 (28%), Positives = 119/283 (42%)
Query: 5 HPVYNDRRNLDNPGLITI---NLNANPIQPVEG-AFLVARSLLYLYMQECTLSKINPQFF 60
+P+ + NL GL ++ NL A I ++ +F +L L + + + +N F
Sbjct: 450 NPI-TELNNLAFSGLFSLKELNLAACWIVTIDRYSFTQFPNLEVLDLGDNNIRTLNHGTF 508
Query: 61 TNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELS 120
L L+ L LS N L I+E F LT L YL L +L+Y F L L L+L
Sbjct: 509 QPLKKLHTLILSHNRLEIMESNAFSGLTGLRYLDLMYNSLSYFHKHHFMGLEKLLVLKLG 568
Query: 121 QNKLKSHIDWTLVLGNLGKLDTL---DL--RQSGISNLPDNVFANNTWLRNLNLAENELI 175
NK+ TL KL +L +L ++ GI +P N F + L+ L L +N +
Sbjct: 569 FNKITYETTRTLQYPPFMKLKSLKQLNLEGQKHGIQVVPRNFFQGLSSLQELLLGKNPSV 628
Query: 176 DLDVATTLGQNLVHLDSLDLSNCHLKGP----LSEDAFVNATKLRTLYLSGNPLSAADLS 231
LD L++L LD+S G L+ F N +L+ L L N L + +
Sbjct: 629 FLDHHQF--DPLINLTKLDISGTK-DGDRSLYLNSSLFQNLKRLKVLRLENNNLESL-VP 684
Query: 232 VALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPL 274
L L SLR L + + L D+ N L
Sbjct: 685 GMFSSLQNLQVFSLRFNNLKVINQSHLENLKSLMFFDVYGNKL 727
>ZFIN|ZDB-GENE-061103-397 [details] [associations]
symbol:zgc:153913 "zgc:153913" species:7955 "Danio
rerio" [GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR001611
PROSITE:PS51450 ZFIN:ZDB-GENE-061103-397 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR000372 SMART:SM00013 KO:K13023
GeneTree:ENSGT00700000104286 EMBL:CABZ01111922 EMBL:BC125910
IPI:IPI00613175 RefSeq:NP_001073448.1 UniGene:Dr.152360
Ensembl:ENSDART00000092924 GeneID:559700 KEGG:dre:559700
HOGENOM:HOG000205740 InParanoid:A0JMK3 OMA:CKVDKCS
OrthoDB:EOG4P8FJC NextBio:20883092 Uniprot:A0JMK3
Length = 496
Score = 244 (91.0 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 85/291 (29%), Positives = 142/291 (48%)
Query: 52 LSKINPQFFTNLTTLNKLDLSGNPLRI-IEPGVFDPLTSLEYLMLNRCNLTYISPSAFDN 110
L ++ + F L L +L++SGN + ++ F LT+L L+LN L+ + F +
Sbjct: 85 LKSVSGEAFERLVELRELEISGNICWMSLDIQTFSSLTNLTRLLLNNNKLSGVDAGLFHS 144
Query: 111 LNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLA 170
L+ L+ L+L N L S + L L +L LDL + IS+L +F NN+ LR L+L
Sbjct: 145 LHQLEMLQLRGNGL-SFLSGRL-FQRLHRLQELDLSFNQISSLSTELFQNNSELRVLSLQ 202
Query: 171 ENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADL 230
N++ +L + +L HL L+L + +L L+ +F L+TL L N L
Sbjct: 203 ANKIPNLPDG--IFTHLDHLQELNLRS-NLIRVLTPGSF--PASLKTLILKKNLLEKLTN 257
Query: 231 SVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEH 290
+V L + L L L+ +PA+ F L+ LD+S N + ++ L S++
Sbjct: 258 AV-FHTLHYITYLDLSQNSLTEVPADLFQNLISLETLDLSENRISTLAGSVFKGLFSIKS 316
Query: 291 LDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLEL 341
+ + ++L + L+ L LS N L ++ SG F++L V EL
Sbjct: 317 VYLQKNSLISVDAHLLKDQHDLQLLDLSNNSLRSIPSGFFEDLDFQCVFEL 367
Score = 235 (87.8 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 92/320 (28%), Positives = 154/320 (48%)
Query: 55 INPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPS--AFDNLN 112
++ Q F L+KL L+ + F+ L L L ++ N+ ++S F +L
Sbjct: 64 LDQQSFPETLRLSKLVFLNGMLKSVSGEAFERLVELRELEISG-NICWMSLDIQTFSSLT 122
Query: 113 HLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAEN 172
+L L L+ NKL S +D L +L +L+ L LR +G+S L +F L+ L+L+ N
Sbjct: 123 NLTRLLLNNNKL-SGVDAGL-FHSLHQLEMLQLRGNGLSFLSGRLFQRLHRLQELDLSFN 180
Query: 173 ELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSV 232
++ L +T L QN L L L + L + F + L+ L L N + L+
Sbjct: 181 QISSL--STELFQNNSELRVLSLQANKIPN-LPDGIFTHLDHLQELNLRSNLIRV--LTP 235
Query: 233 ALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLD 292
P + L L L+ L +L FH + LD+S N L + L L SLE LD
Sbjct: 236 GSFPAS-LKTLILKKNLLEKLTNAVFHTLHYITYLDLSQNSLTEVPADLFQNLISLETLD 294
Query: 293 MGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNET 352
+ + + ++ S F + S+K++ L N L ++++ L ++ L +L+L+N L + +
Sbjct: 295 LSENRISTLAGSVFKGLFSIKSVYLQKNSLISVDAHLLKDQHDLQLLDLSNNSLRSI-PS 353
Query: 353 VFHENYTYPDLEELRLSGNP 372
F E+ + + ELR GNP
Sbjct: 354 GFFEDLDFQCVFELR--GNP 371
Score = 207 (77.9 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 73/253 (28%), Positives = 119/253 (47%)
Query: 19 LITINLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLR 77
L + LN N + V+ G F L L ++ LS ++ + F L L +LDLS N +
Sbjct: 124 LTRLLLNNNKLSGVDAGLFHSLHQLEMLQLRGNGLSFLSGRLFQRLHRLQELDLSFNQIS 183
Query: 78 IIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNL 137
+ +F + L L L + + F +L+HL+ L L N ++ L G+
Sbjct: 184 SLSTELFQNNSELRVLSLQANKIPNLPDGIFTHLDHLQELNLRSNLIR-----VLTPGSF 238
Query: 138 -GKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLS 196
L TL L+++ + L + VF ++ L+L++N L + V L QNL+ L++LDLS
Sbjct: 239 PASLKTLILKKNLLEKLTNAVFHTLHYITYLDLSQNSLTE--VPADLFQNLISLETLDLS 296
Query: 197 NCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPAN 256
+ L+ F ++++YL N L + D + LK L L L N L +P+
Sbjct: 297 ENRIS-TLAGSVFKGLFSIKSVYLQKNSLISVDAHL-LKDQHDLQLLDLSNNSLRSIPSG 354
Query: 257 TFHR--FTCLQEL 267
F F C+ EL
Sbjct: 355 FFEDLDFQCVFEL 367
Score = 199 (75.1 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 84/317 (26%), Positives = 140/317 (44%)
Query: 62 NLTT-LNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELS 120
N++T + +L + + + ++ F L L+ L +S AF+ L L+ LE+S
Sbjct: 46 NISTQVRELIVVASGIPDLDQQSFPETLRLSKLVFLNGMLKSVSGEAFERLVELRELEIS 105
Query: 121 QNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVA 180
N +D +L L L L + +S + +F + L L L N L L +
Sbjct: 106 GNICWMSLD-IQTFSSLTNLTRLLLNNNKLSGVDAGLFHSLHQLEMLQLRGNGLSFL--S 162
Query: 181 TTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKL 240
L Q L L LDLS + LS + F N ++LR L L N + + L L
Sbjct: 163 GRLFQRLHRLQELDLSFNQISS-LSTELFQNNSELRVLSLQANKIPNLPDGI-FTHLDHL 220
Query: 241 HRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQR 300
L+LR+ + L +F L+ L + N L A+ L + +LD+ ++L
Sbjct: 221 QELNLRSNLIRVLTPGSFP--ASLKTLILKKNLLEKLTNAVFHTLHYITYLDLSQNSLTE 278
Query: 301 ISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTY 360
+ F + SL+TL LS N++ TL +F+ L + + L L ++ + + +
Sbjct: 279 VPADLFQNLISLETLDLSENRISTLAGSVFKGLFSIKSVYLQKNSLISVDAHLLKDQH-- 336
Query: 361 PDLEELRLSGNPLHVLP 377
DL+ L LS N L +P
Sbjct: 337 -DLQLLDLSNNSLRSIP 352
Score = 188 (71.2 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 61/195 (31%), Positives = 92/195 (47%)
Query: 150 ISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAF 209
+ +LP N+ +T +R L + + + DLD + + L L L N LK +S +AF
Sbjct: 40 MKSLPVNI---STQVRELIVVASGIPDLD-QQSFPETL-RLSKLVFLNGMLKS-VSGEAF 93
Query: 210 VNATKLRTLYLSGNPLSAADLSV-ALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELD 268
+LR L +SGN + L + LT L RL L N LS + A FH L+ L
Sbjct: 94 ERLVELRELEISGN-ICWMSLDIQTFSSLTNLTRLLLNNNKLSGVDAGLFHSLHQLEMLQ 152
Query: 269 ISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESG 328
+ N L L L L+ LD+ ++ + +S F + L+ L L NK+ L G
Sbjct: 153 LRGNGLSFLSGRLFQRLHRLQELDLSFNQISSLSTELFQNNSELRVLSLQANKIPNLPDG 212
Query: 329 LFQNLTHLSVLELNN 343
+F +L HL L L +
Sbjct: 213 IFTHLDHLQELNLRS 227
Score = 162 (62.1 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 71/234 (30%), Positives = 105/234 (44%)
Query: 41 SLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNL 100
+L L + LS ++ F +L L L L GN L + +F L L+ L L+ +
Sbjct: 123 NLTRLLLNNNKLSGVDAGLFHSLHQLEMLQLRGNGLSFLSGRLFQRLHRLQELDLSFNQI 182
Query: 101 TYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFAN 160
+ +S F N + L+ L L NK+ + D + +L L L+LR + I L F
Sbjct: 183 SSLSTELFQNNSELRVLSLQANKIPNLPDG--IFTHLDHLQELNLRSNLIRVLTPGSFPA 240
Query: 161 NTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYL 220
+ L+ L L +N L L A L ++ LDLS L + D F N L TL L
Sbjct: 241 S--LKTLILKKNLLEKLTNAVF--HTLHYITYLDLSQNSLT-EVPADLFQNLISLETLDL 295
Query: 221 SGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPL 274
S N +S SV K L + + L+ L + A+ LQ LD+S+N L
Sbjct: 296 SENRISTLAGSV-FKGLFSIKSVYLQKNSLISVDAHLLKDQHDLQLLDLSNNSL 348
Score = 148 (57.2 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 95/363 (26%), Positives = 144/363 (39%)
Query: 210 VN-ATKLRTLYL--SGNPLSAADLSVALKPLT-KLHRLSLRNCGLSRLPANTFHRFTCLQ 265
VN +T++R L + SG P DL P T +L +L N L + F R L+
Sbjct: 45 VNISTQVRELIVVASGIP----DLDQQSFPETLRLSKLVFLNGMLKSVSGEAFERLVELR 100
Query: 266 ELDISHNPL-IDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLET 324
EL+IS N + S L +L L + + L + F + L+ L L GN L
Sbjct: 101 ELEISGNICWMSLDIQTFSSLTNLTRLLLNNNKLSGVDAGLFHSLHQLEMLQLRGNGLSF 160
Query: 325 LESGLFQNLTHLSVLELNNCGLTRLNETVFHEN--------------------YTYPD-L 363
L LFQ L L L+L+ ++ L+ +F N +T+ D L
Sbjct: 161 LSGRLFQRLHRLQELDLSFNQISSLSTELFQNNSELRVLSLQANKIPNLPDGIFTHLDHL 220
Query: 364 EELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHE-NY-TYPDLEE 421
+EL L N + VL + S++T+ + KN +L L VFH +Y TY DL +
Sbjct: 221 QELNLRSNLIRVLTPGSFPASLKTLILK--KN-----LLEKLTNAVFHTLHYITYLDLSQ 273
Query: 422 LRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNL-S 480
L+ P + N +I L +VF +I S+ L N+L S
Sbjct: 274 NSLTEVPADLFQ--NLISLETLDLSEN-----RISTLAGSVFKGLFSIKSVYLQKNSLIS 326
Query: 481 MTSELSFQFXXXXXXXXXXXXXXXXXTHISPTVLRHNRAITSI-KLVGNPWKCDCNIADM 539
+ + L P+ + + +L GNPW CDC I
Sbjct: 327 VDAHL-----LKDQHDLQLLDLSNNSLRSIPSGFFEDLDFQCVFELRGNPWSCDCGIHYF 381
Query: 540 WEW 542
++W
Sbjct: 382 YDW 384
Score = 127 (49.8 bits), Expect = 0.00012, P = 0.00012
Identities = 46/147 (31%), Positives = 75/147 (51%)
Query: 13 NLDNPGLITINLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDL 71
+LD+ L +NL +N I+ + G+F SL L +++ L K+ F L + LDL
Sbjct: 216 HLDH--LQELNLRSNLIRVLTPGSF--PASLKTLILKKNLLEKLTNAVFHTLHYITYLDL 271
Query: 72 SGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWT 131
S N L + +F L SLE L L+ ++ ++ S F L +K++ L +N L S +D
Sbjct: 272 SQNSLTEVPADLFQNLISLETLDLSENRISTLAGSVFKGLFSIKSVYLQKNSLIS-VDAH 330
Query: 132 LVLGNLGKLDTLDLRQSGISNLPDNVF 158
L L + L LDL + + ++P F
Sbjct: 331 L-LKDQHDLQLLDLSNNSLRSIPSGFF 356
>UNIPROTKB|F1MJZ4 [details] [associations]
symbol:IGFALS "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005634 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GeneTree:ENSGT00690000101816 EMBL:DAAA02057304
IPI:IPI00807324 Ensembl:ENSBTAT00000047326 OMA:FCGLGEL
Uniprot:F1MJZ4
Length = 610
Score = 239 (89.2 bits), Expect = 2.0e-17, Sum P(2) = 2.0e-17
Identities = 96/330 (29%), Positives = 148/330 (44%)
Query: 22 INLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIE 80
+NL N + + + AF L L + L+ + P F L L +LDLS N LR ++
Sbjct: 179 LNLGWNSLTVLPDTAFQGLAGLRELVLAGNKLAYLQPPLFCGLGELRELDLSRNTLRSVK 238
Query: 81 PGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKL 140
VF L L+ L L+ + ++P AF + L+ L+LS N++ S ++ + G LG L
Sbjct: 239 ANVFVKLPKLQKLYLDHNLVAAVAPGAFLGMKALRWLDLSHNRVGSLLEDSFP-GLLG-L 296
Query: 141 DTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHL 200
L L + ++ L F + +L L L N L L G L L+ L L++ L
Sbjct: 297 HVLRLSHNVLAGLRPRTFKDLHFLEELQLGHNRLRQLPEEAFAG--LGQLEVLALNDNQL 354
Query: 201 KGPLSEDAFVNATKLRTLYLSGNPLSAADLSV-ALKPLTKLHRLSLRNCGLSRLPANTFH 259
+ L F+ L L LS N L DL A + L KLH L L L+RL F
Sbjct: 355 Q-ELRPGGFLGLRNLAVLNLSSNCLR--DLPERAFQGLAKLHSLHLEGGCLARLGPLAFA 411
Query: 260 RFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSG 319
+ L+ L + N + D L L L LD+ + L + F + L+ L+L+
Sbjct: 412 GLSGLRRLFLKGNSIADVDERSLGGLAELLELDLTANQLTHLPGRLFQDLGRLEYLLLAR 471
Query: 320 NKLETLESGLFQNLTHLSVLELNNCGLTRL 349
N+L L + L L++++ L L
Sbjct: 472 NRLSALPADALGPLQRTFWLDVSHNRLEAL 501
Score = 231 (86.4 bits), Expect = 1.5e-16, Sum P(2) = 1.5e-16
Identities = 107/373 (28%), Positives = 155/373 (41%)
Query: 2 WQGHPVYNDRRNLDNPGLITINLNANPIQPVEGA-FLVARSLLYLYMQECTLSKINPQFF 60
W V D GL + L N + ++ F L L + TL + F
Sbjct: 183 WNSLTVLPDTAFQGLAGLRELVLAGNKLAYLQPPLFCGLGELRELDLSRNTLRSVKANVF 242
Query: 61 TNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELS 120
L L KL L N + + PG F + +L +L L+ + + +F L L L LS
Sbjct: 243 VKLPKLQKLYLDHNLVAAVAPGAFLGMKALRWLDLSHNRVGSLLEDSFPGLLGLHVLRLS 302
Query: 121 QNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVA 180
N L T +L L+ L L + + LP+ FA L L L +N+L +L
Sbjct: 303 HNVLAGLRPRTFK--DLHFLEELQLGHNRLRQLPEEAFAGLGQLEVLALNDNQLQELRPG 360
Query: 181 TTLGQNLVHLDSLDLS-NCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTK 239
LG L +L L+LS NC L+ L E AF KL +L+L G L+ +A L+
Sbjct: 361 GFLG--LRNLAVLNLSSNC-LRD-LPERAFQGLAKLHSLHLEGGCLARLG-PLAFAGLSG 415
Query: 240 LHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQ 299
L RL L+ ++ + + L ELD++ N L L L LE+L + + L
Sbjct: 416 LRRLFLKGNSIADVDERSLGGLAELLELDLTANQLTHLPGRLFQDLGRLEYLLLARNRLS 475
Query: 300 RISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYT 359
+ + L +S N+LE L + L+ L L L N L T +
Sbjct: 476 ALPADALGPLQRTFWLDVSHNRLEALPAAALAPLSRLRFLSLRNNSL----RTFAPQP-- 529
Query: 360 YPDLEELRLSGNP 372
P LE L L GNP
Sbjct: 530 -PGLERLWLEGNP 541
Score = 222 (83.2 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 106/358 (29%), Positives = 143/358 (39%)
Query: 17 PGLITINLNANPIQPVEGA-FLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNP 75
PG + L+ N + A F L +L +Q L+ + PQ L L L L N
Sbjct: 78 PGTRALWLDGNNFSSIPAAAFRNLSGLGFLNLQGSGLASLEPQALLGLRGLCHLHLEHNR 137
Query: 76 LRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLG 135
L + F L L L+ L+ + F L HL L L N L D T G
Sbjct: 138 LHALAAHTFLHTPGLASLGLSNNLLSRLDEGLFRGLAHLWDLNLGWNSLTVLPD-TAFQG 196
Query: 136 NLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDL 195
G L L L + ++ L +F LR L+L+ N L V + L L L L
Sbjct: 197 LAG-LRELVLAGNKLAYLQPPLFCGLGELRELDLSRNTL--RSVKANVFVKLPKLQKLYL 253
Query: 196 SNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPA 255
+ +L ++ AF+ LR L LS N + + L + L LH L L + L+ L
Sbjct: 254 DH-NLVAAVAPGAFLGMKALRWLDLSHNRVGSL-LEDSFPGLLGLHVLRLSHNVLAGLRP 311
Query: 256 NTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTL 315
TF L+EL + HN L + L LE L + + LQ + FL + +L L
Sbjct: 312 RTFKDLHFLEELQLGHNRLRQLPEEAFAGLGQLEVLALNDNQLQELRPGGFLGLRNLAVL 371
Query: 316 ILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPL 373
LS N L L FQ L L L L L RL F L L L GN +
Sbjct: 372 NLSSNCLRDLPERAFQGLAKLHSLHLEGGCLARLGPLAFAG---LSGLRRLFLKGNSI 426
Score = 192 (72.6 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
Identities = 112/415 (26%), Positives = 170/415 (40%)
Query: 81 PGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKL 140
PG P T L L+ N + I +AF NL+ L L L + L S ++ +LG G L
Sbjct: 73 PGGLPPGTRA--LWLDGNNFSSIPAAAFRNLSGLGFLNLQGSGLAS-LEPQALLGLRG-L 128
Query: 141 DTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHL 200
L L + + L + F + L +L L+ N L LD L + L HL L+L L
Sbjct: 129 CHLHLEHNRLHALAAHTFLHTPGLASLGLSNNLLSRLDEG--LFRGLAHLWDLNLGWNSL 186
Query: 201 KGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHR 260
L + AF LR L L+GN L+ + L +L L L L + AN F +
Sbjct: 187 T-VLPDTAFQGLAGLRELVLAGNKLAYLQPPLFCG-LGELRELDLSRNTLRSVKANVFVK 244
Query: 261 FTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGN 320
LQ+L + HN + +++L LD+ ++ + + +F + L L LS N
Sbjct: 245 LPKLQKLYLDHNLVAAVAPGAFLGMKALRWLDLSHNRVGSLLEDSFPGLLGLHVLRLSHN 304
Query: 321 KLETLESGLFQNLTHLSVLELNNCGLTRLNETVFH-----ENYTYPD--LEELRLSG--- 370
L L F++L L L+L + L +L E F E D L+ELR G
Sbjct: 305 VLAGLRPRTFKDLHFLEELQLGHNRLRQLPEEAFAGLGQLEVLALNDNQLQELRPGGFLG 364
Query: 371 -NPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHEN-YTYPDLEELR---LS 425
L VL S+ +R +P + ++ L L + + + L LR L
Sbjct: 365 LRNLAVLNLSSN--CLRDLPERAFQGLAKLHSLHLEGGCLARLGPLAFAGLSGLRRLFLK 422
Query: 426 GNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNLS 480
GN + ++ +LP +F + + L LA N LS
Sbjct: 423 GNS--IADVDERSLGGLAELLELDLTANQLTHLPGRLFQDLGRLEYLLLARNRLS 475
Score = 170 (64.9 bits), Expect = 7.9e-10, Sum P(2) = 7.9e-10
Identities = 86/297 (28%), Positives = 129/297 (43%)
Query: 208 AFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQEL 267
AF N + L L L G+ L++ + AL L L L L + L L A+TF L L
Sbjct: 97 AFRNLSGLGFLNLQGSGLASLEPQ-ALLGLRGLCHLHLEHNRLHALAAHTFLHTPGLASL 155
Query: 268 DISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLES 327
+S+N L L L L L++G+++L + + F + L+ L+L+GNKL L+
Sbjct: 156 GLSNNLLSRLDEGLFRGLAHLWDLNLGWNSLTVLPDTAFQGLAGLRELVLAGNKLAYLQP 215
Query: 328 GLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLH-VLPDS---TK-- 381
LF L L L+L+ L + VF + P L++L L N + V P + K
Sbjct: 216 PLFCGLGELRELDLSRNTLRSVKANVFVK---LPKLQKLYLDHNLVAAVAPGAFLGMKAL 272
Query: 382 ---QYSMRTIPTQIWKNFDFLVILFIL----NETVFHENYTYPDL---EELRLSGNPLHV 431
S + + + +F L+ L +L N T+ DL EEL+L N L
Sbjct: 273 RWLDLSHNRVGSLLEDSFPGLLGLHVLRLSHNVLAGLRPRTFKDLHFLEELQLGHNRLRQ 332
Query: 432 LPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSFQ 488
LP ++ L P F RN+ LNL++N L E +FQ
Sbjct: 333 LP--EEAFAGLGQLEVLALNDNQLQELRPGGFLGLRNLAVLNLSSNCLRDLPERAFQ 387
Score = 133 (51.9 bits), Expect = 7.9e-06, Sum P(2) = 7.9e-06
Identities = 78/285 (27%), Positives = 111/285 (38%)
Query: 204 LSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTC 263
L+ F++ L +L LS N LS D + + L L L+L L+ LP F
Sbjct: 141 LAAHTFLHTPGLASLGLSNNLLSRLDEGL-FRGLAHLWDLNLGWNSLTVLPDTAFQGLAG 199
Query: 264 LQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLE 323
L+EL ++ N L L L L LD+ + L+ + + F+K+ L+ L L N +
Sbjct: 200 LRELVLAGNKLAYLQPPLFCGLGELRELDLSRNTLRSVKANVFVKLPKLQKLYLDHNLVA 259
Query: 324 TLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVL-PDSTKQ 382
+ G F + L L+L++ + L E F L LRLS N L L P + K
Sbjct: 260 AVAPGAFLGMKALRWLDLSHNRVGSLLEDSFPGLL---GLHVLRLSHNVLAGLRPRTFKD 316
Query: 383 YSMRTIPTQIWKNFDFLVILFILNETVFHENYTYPDLEELRLSGNPLHVLPTGNXXXXXX 442
Q+ N L L E F LE L L+ N L L G
Sbjct: 317 LHFLE-ELQLGHNR-----LRQLPEEAFAG---LGQLEVLALNDNQLQELRPGGFLGLRN 367
Query: 443 XXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSF 487
C D LP F + SL+L L+ L+F
Sbjct: 368 LAVLNLSSN-CLRD-LPERAFQGLAKLHSLHLEGGCLARLGPLAF 410
Score = 53 (23.7 bits), Expect = 2.0e-17, Sum P(2) = 2.0e-17
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 525 LVGNPWKCDCNIADMWEWATREKGDI 550
L GNPW C C + + +A ++ +
Sbjct: 537 LEGNPWDCGCALGALRAFALQQPASV 562
>UNIPROTKB|F1NEL3 [details] [associations]
symbol:LGR4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016500 "protein-hormone receptor activity" evidence=IEA]
[GO:0030539 "male genitalia development" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0050673 "epithelial cell proliferation"
evidence=IEA] [GO:0061290 "canonical Wnt receptor signaling pathway
involved in metanephric kidney development" evidence=IEA]
[GO:0072202 "cell differentiation involved in metanephros
development" evidence=IEA] [GO:0072224 "metanephric glomerulus
development" evidence=IEA] [GO:0072282 "metanephric nephron tubule
morphogenesis" evidence=IEA] [GO:0090190 "positive regulation of
branching involved in ureteric bud morphogenesis" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 GO:GO:0045892
GO:GO:0045893 InterPro:IPR003591 SMART:SM00369 GO:GO:0090190
GO:GO:0050673 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0016500 GeneTree:ENSGT00650000092962 OMA:DGYWSDC
EMBL:AADN02040116 EMBL:AADN02040117 EMBL:AADN02040118
EMBL:AADN02040119 IPI:IPI00595681 ProteinModelPortal:F1NEL3
Ensembl:ENSGALT00000019904 Uniprot:F1NEL3
Length = 1038
Score = 249 (92.7 bits), Expect = 2.1e-17, P = 2.1e-17
Identities = 94/345 (27%), Positives = 168/345 (48%)
Query: 18 GLITINLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPL 76
GL ++ L+AN I V + +F L +L++ + +L+++ +NL +L L L+ N +
Sbjct: 213 GLQSLRLDANHITAVPKDSFEGLVQLRHLWLDDNSLTEVPIHPLSNLPSLQALTLALNKI 272
Query: 77 RIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGN 136
I F L+SL L L+ + I FD L++L+TL+L+ N + +++ +
Sbjct: 273 THIPDYAFTNLSSLVVLHLHNNKIKTIGKHCFDGLDNLETLDLNYNNM---VEFPEAIKA 329
Query: 137 LGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLS 196
L L L + IS +PD FA N LR ++L +N L V + QNL L SL +
Sbjct: 330 LPNLKELAFHSNYISIIPDGAFAGNPLLRMIHLYDNPLSF--VGNSAFQNLSDLHSLVI- 386
Query: 197 NCHLKGPLSEDAFVNAT---KLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRL 253
+G F N T L +L L+G +++ +++ + L L L + L
Sbjct: 387 ----RGASMVQRFPNLTGTVNLESLTLTGTKINSIPVNLCQEQ-KMLRTLDLSYNNIKDL 441
Query: 254 PANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLK 313
P+ T R L+E+ + HN + + L SL LD+ + + +I + F + ++
Sbjct: 442 PSFTGCR--SLEEISLQHNQIHEITDDTFQGLSSLRILDLSRNRICKIHKEAFTTIGAIV 499
Query: 314 TLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENY 358
L LS N+L ++ + + L+ L+ L+L G + L E + +N+
Sbjct: 500 NLDLSFNELTSVPT---EGLSGLNQLKL--AGNSELKEALAAQNF 539
Score = 209 (78.6 bits), Expect = 4.5e-13, P = 4.5e-13
Identities = 106/392 (27%), Positives = 173/392 (44%)
Query: 52 LSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNL 111
++++ F N L +L L+GN L I P L L+ L L L + A L
Sbjct: 152 ITRLPEDAFKNFPYLEELRLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPNEAIRGL 211
Query: 112 NHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAE 171
+ L++L L N + + + G L +L L L + ++ +P + +N L+ L LA
Sbjct: 212 SGLQSLRLDANHITA-VPKDSFEG-LVQLRHLWLDDNSLTEVPIHPLSNLPSLQALTLAL 269
Query: 172 NELIDL-DVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADL 230
N++ + D A T NL L L L N +K + + F L TL L+ N + +
Sbjct: 270 NKITHIPDYAFT---NLSSLVVLHLHNNKIK-TIGKHCFDGLDNLETLDLNYNNM--VEF 323
Query: 231 SVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEH 290
A+K L L L+ + +S +P F L+ + + NPL + L L
Sbjct: 324 PEAIKALPNLKELAFHSNYISIIPDGAFAGNPLLRMIHLYDNPLSFVGNSAFQNLSDLHS 383
Query: 291 LDM-GYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRL 349
L + G S +QR T +L++L L+G K+ ++ L Q L L+L+ + L
Sbjct: 384 LVIRGASMVQRFPNLT--GTVNLESLTLTGTKINSIPVNLCQEQKMLRTLDLSYNNIKDL 441
Query: 350 NETVFHENYT-YPDLEELRLSGNPLHVLPDSTKQ--YSMRTIP---TQIWKNFD--FLVI 401
++T LEE+ L N +H + D T Q S+R + +I K F I
Sbjct: 442 ------PSFTGCRSLEEISLQHNQIHEITDDTFQGLSSLRILDLSRNRICKIHKEAFTTI 495
Query: 402 LFILN-ETVFHENYTYPD-----LEELRLSGN 427
I+N + F+E + P L +L+L+GN
Sbjct: 496 GAIVNLDLSFNELTSVPTEGLSGLNQLKLAGN 527
Score = 182 (69.1 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 96/379 (25%), Positives = 171/379 (45%)
Query: 20 ITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRII 79
+ +++N N + E AF L L + LS I+P+ + L L L L N L+ +
Sbjct: 145 LDVSMN-NITRLPEDAFKNFPYLEELRLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTV 203
Query: 80 EPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGK 139
L+ L+ L L+ ++T + +F+ L L+ L L N L + + L NL
Sbjct: 204 PNEAIRGLSGLQSLRLDANHITAVPKDSFEGLVQLRHLWLDDNSL-TEVP-IHPLSNLPS 261
Query: 140 LDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLS-NC 198
L L L + I+++PD F N + L L+L N++ + L +L++LDL+ N
Sbjct: 262 LQALTLALNKITHIPDYAFTNLSSLVVLHLHNNKI--KTIGKHCFDGLDNLETLDLNYNN 319
Query: 199 HLKGPLSEDAFVNATKL--RTLYLS--------GNPLSAADLSVALKPLTKLHRLSLRNC 248
++ P + A N +L + Y+S GNPL + + PL+ + + +N
Sbjct: 320 MVEFPEAIKALPNLKELAFHSNYISIIPDGAFAGNPLLRM-IHLYDNPLSFVGNSAFQNL 378
Query: 249 G-LSRLP---ANTFHRF-----TC-LQELDISHNPLIDAFTALLSPLESLEHLDMGYSNL 298
L L A+ RF T L+ L ++ + L + L LD+ Y+N+
Sbjct: 379 SDLHSLVIRGASMVQRFPNLTGTVNLESLTLTGTKINSIPVNLCQEQKMLRTLDLSYNNI 438
Query: 299 QRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENY 358
+ + +F SL+ + L N++ + FQ L+ L +L+L+ + ++++ F
Sbjct: 439 KDLP--SFTGCRSLEEISLQHNQIHEITDDTFQGLSSLRILDLSRNRICKIHKEAFT--- 493
Query: 359 TYPDLEELRLSGNPLHVLP 377
T + L LS N L +P
Sbjct: 494 TIGAIVNLDLSFNELTSVP 512
Score = 171 (65.3 bits), Expect = 5.8e-09, P = 5.8e-09
Identities = 84/326 (25%), Positives = 144/326 (44%)
Query: 69 LDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHI 128
+D SG L + PG+ +L+ M N N+T + AF N +L+ L L+ N L S I
Sbjct: 124 VDCSGRGLAAVPPGLSAFTQALDVSM-N--NITRLPEDAFKNFPYLEELRLAGNDL-SFI 179
Query: 129 DWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENEL--IDLDVATTLGQN 186
L L +L L L+ + + +P+ + L++L L N + + D L Q
Sbjct: 180 H-PKALSGLKELKVLTLQNNQLKTVPNEAIRGLSGLQSLRLDANHITAVPKDSFEGLVQ- 237
Query: 187 LVHL--DSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLS 244
L HL D L+ + PLS N L+ L L+ N ++ A L+ L L
Sbjct: 238 LRHLWLDDNSLTEVPIH-PLS-----NLPSLQALTLALNKITHIP-DYAFTNLSSLVVLH 290
Query: 245 LRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRS 304
L N + + + F L+ LD+++N +++ F + L +L+ L + + I
Sbjct: 291 LHNNKIKTIGKHCFDGLDNLETLDLNYNNMVE-FPEAIKALPNLKELAFHSNYISIIPDG 349
Query: 305 TFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLE 364
F L+ + L N L + + FQNL+ L L + + + F +LE
Sbjct: 350 AFAGNPLLRMIHLYDNPLSFVGNSAFQNLSDLHSLVIRGASMVQR----FPNLTGTVNLE 405
Query: 365 ELRLSGNPLHVLPDST--KQYSMRTI 388
L L+G ++ +P + +Q +RT+
Sbjct: 406 SLTLTGTKINSIPVNLCQEQKMLRTL 431
Score = 165 (63.1 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 77/337 (22%), Positives = 144/337 (42%)
Query: 143 LDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKG 202
+D G++ +P + A + + L+++ N + L +N +L+ L L+ L
Sbjct: 124 VDCSGRGLAAVPPGLSA---FTQALDVSMNNITRLPEDAF--KNFPYLEELRLAGNDLSF 178
Query: 203 PLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFT 262
+ A +L+ L L N L + A++ L+ L L L ++ +P ++F
Sbjct: 179 -IHPKALSGLKELKVLTLQNNQLKTVP-NEAIRGLSGLQSLRLDANHITAVPKDSFEGLV 236
Query: 263 CLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKL 322
L+ L + N L + LS L SL+ L + + + I F ++SL L L NK+
Sbjct: 237 QLRHLWLDDNSLTEVPIHPLSNLPSLQALTLALNKITHIPDYAFTNLSSLVVLHLHNNKI 296
Query: 323 ETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQ 382
+T+ F L +L L+LN + E + P+L+EL N + ++PD
Sbjct: 297 KTIGKHCFDGLDNLETLDLNYNNMVEFPEAI----KALPNLKELAFHSNYISIIPDGAFA 352
Query: 383 YSMRTIPTQIWKNFDFLVILFILNETVFHENYTYPDLEELRLSGNPLHVLPTGNXXXXXX 442
+ ++ N + F+ N + F +N + DL L + G + V N
Sbjct: 353 GNPLLRMIHLYDN----PLSFVGN-SAF-QNLS--DLHSLVIRGASM-VQRFPNLTGTVN 403
Query: 443 XXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNL 479
KI+ +P N+ + + +L+L+ NN+
Sbjct: 404 LESLTLTGT--KINSIPVNLCQEQKMLRTLDLSYNNI 438
Score = 131 (51.2 bits), Expect = 0.00012, P = 0.00012
Identities = 63/259 (24%), Positives = 106/259 (40%)
Query: 234 LKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDM 293
L T+ +S+ N ++RLP + F F L+EL ++ N L LS L+ L+ L +
Sbjct: 138 LSAFTQALDVSMNN--ITRLPEDAFKNFPYLEELRLAGNDLSFIHPKALSGLKELKVLTL 195
Query: 294 GYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETV 353
+ L+ + ++ L++L L N + + F+ L L L L++ LT E
Sbjct: 196 QNNQLKTVPNEAIRGLSGLQSLRLDANHITAVPKDSFEGLVQLRHLWLDDNSLT---EVP 252
Query: 354 FHENYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILN---ETVF 410
H P L+ L L+ N + +PD Y+ + N LV+L + N +T+
Sbjct: 253 IHPLSNLPSLQALTLALNKITHIPD----YA--------FTNLSSLVVLHLHNNKIKTIG 300
Query: 411 HENYTYPD-LEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNI 469
+ D LE L L+ N + P I +P F +
Sbjct: 301 KHCFDGLDNLETLDLNYNNMVEFPEAIKALPNLKELAFHSNY---ISIIPDGAFAGNPLL 357
Query: 470 TSLNLANNNLSMTSELSFQ 488
++L +N LS +FQ
Sbjct: 358 RMIHLYDNPLSFVGNSAFQ 376
>UNIPROTKB|Q96FE5 [details] [associations]
symbol:LINGO1 "Leucine-rich repeat and immunoglobulin-like
domain-containing nogo receptor-interacting protein 1" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005154 "epidermal growth factor receptor binding"
evidence=IEA] [GO:0021954 "central nervous system neuron
development" evidence=IEA] [GO:0031175 "neuron projection
development" evidence=IEA] [GO:0043491 "protein kinase B signaling
cascade" evidence=IEA] [GO:0048715 "negative regulation of
oligodendrocyte differentiation" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=TAS] [GO:0048011 "neurotrophin TRK receptor
signaling pathway" evidence=TAS] [GO:0050770 "regulation of
axonogenesis" evidence=TAS] [GO:0050771 "negative regulation of
axonogenesis" evidence=TAS] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021
GO:GO:0005886 Reactome:REACT_111102 GO:GO:0048011 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
EMBL:CH471136 GO:GO:0043491 GO:GO:0031175 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 GO:GO:0050771
GO:GO:0021954 MEROPS:I43.001 GO:GO:0048715 Orphanet:862
OrthoDB:EOG40S0F8 CTD:84894 HOVERGEN:HBG057546 OMA:RIRDRKP
EMBL:AY324320 EMBL:AY324322 EMBL:AY324323 EMBL:AY358284
EMBL:AK027500 EMBL:AK291363 EMBL:BC011057 EMBL:BC068558
EMBL:AL834260 IPI:IPI00465325 IPI:IPI00795326 RefSeq:NP_116197.4
UniGene:Hs.656765 UniGene:Hs.736275 PDB:2ID5 PDBsum:2ID5
ProteinModelPortal:Q96FE5 SMR:Q96FE5 IntAct:Q96FE5
MINT:MINT-1378183 STRING:Q96FE5 PhosphoSite:Q96FE5 PaxDb:Q96FE5
PRIDE:Q96FE5 Ensembl:ENST00000355300 Ensembl:ENST00000561030
GeneID:84894 KEGG:hsa:84894 UCSC:uc002bct.1 GeneCards:GC15M077905
H-InvDB:HIX0012466 HGNC:HGNC:21205 HPA:HPA011630 MIM:609791
neXtProt:NX_Q96FE5 PharmGKB:PA162394087 InParanoid:Q96FE5
EvolutionaryTrace:Q96FE5 GenomeRNAi:84894 NextBio:75236 Bgee:Q96FE5
CleanEx:HS_LINGO1 Genevestigator:Q96FE5 Uniprot:Q96FE5
Length = 620
Score = 241 (89.9 bits), Expect = 3.3e-17, Sum P(2) = 3.3e-17
Identities = 90/311 (28%), Positives = 145/311 (46%)
Query: 64 TTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNK 123
T LDL N ++ + F LE L LN ++ + P AF+NL +L+TL L N+
Sbjct: 71 TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNR 130
Query: 124 LKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTL 183
LK I + G L L LD+ ++ I L D +F + L++L + +N+L+ +
Sbjct: 131 LKL-IPLGVFTG-LSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFS 188
Query: 184 GQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRL 243
G N L+ L L C+L + +A + L L L ++A + K L +L L
Sbjct: 189 GLN--SLEQLTLEKCNLTS-IPTEALSHLHGLIVLRLRHLNINAIR-DYSFKRLYRLKVL 244
Query: 244 SLRNCG-LSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRIS 302
+ + L + N + L L I+H L + L L L++ Y+ + I
Sbjct: 245 EISHWPYLDTMTPNCLYGLN-LTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIE 303
Query: 303 RSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPD 362
S ++ L+ + L G +L +E F+ L +L VL ++ LT L E+VFH + +
Sbjct: 304 GSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFH---SVGN 360
Query: 363 LEELRLSGNPL 373
LE L L NPL
Sbjct: 361 LETLILDSNPL 371
Score = 218 (81.8 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 74/294 (25%), Positives = 136/294 (46%)
Query: 52 LSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNL 111
+ +N F + L +L+L+ N + +EPG F+ L +L L L L I F L
Sbjct: 83 IKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGL 142
Query: 112 NHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAE 171
++L L++S+NK+ +D+ + +L L +L++ + + + F+ L L L +
Sbjct: 143 SNLTKLDISENKIVILLDY--MFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEK 200
Query: 172 NELIDLDVATTLGQNLVHLDSLDLSNC-HLK-GPLSEDAFVNATKLRTLYLSGNPLSAAD 229
L + + L HL L + HL + + +F +L+ L +S P
Sbjct: 201 CNLTSIPT-----EALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTM 255
Query: 230 LSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLE 289
L L L LS+ +C L+ +P L+ L++S+NP+ ++L L L+
Sbjct: 256 TPNCLYGLN-LTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQ 314
Query: 290 HLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNN 343
+ + L + F + L+ L +SGN+L TLE +F ++ +L L L++
Sbjct: 315 EIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDS 368
Score = 206 (77.6 bits), Expect = 2.5e-13, Sum P(2) = 2.5e-13
Identities = 87/277 (31%), Positives = 130/277 (46%)
Query: 17 PGLITINLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNP 75
P L + LN N + VE GAF +L L ++ L I FT L+ L KLD+S N
Sbjct: 95 PHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENK 154
Query: 76 LRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLG 135
+ I+ +F L +L+ L + +L YIS AF LN L+ L L + L S I T L
Sbjct: 155 IVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTS-IP-TEALS 212
Query: 136 NLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTL-GQNLVHLDSLD 194
+L L L LR I+ + D F L+ L ++ +D L G NL SL
Sbjct: 213 HLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLT---SLS 269
Query: 195 LSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLP 254
+++C+L + A + LR L LS NP+S + S+ L L +L + L L+ +
Sbjct: 270 ITHCNLTA-VPYLAVRHLVYLRFLNLSYNPISTIEGSM-LHELLRLQEIQLVGGQLAVVE 327
Query: 255 ANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHL 291
F L+ L++S N L ++ + +LE L
Sbjct: 328 PYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETL 364
Score = 148 (57.2 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 75/313 (23%), Positives = 132/313 (42%)
Query: 193 LDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSR 252
LDL +K L++D F + L L L+ N +SA + A L L L LR+ L
Sbjct: 76 LDLGKNRIK-TLNQDEFASFPHLEELELNENIVSAVEPG-AFNNLFNLRTLGLRSNRLKL 133
Query: 253 LPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSL 312
+P F + L +LDIS N ++ + L +L+ L++G ++L IS F + SL
Sbjct: 134 IPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSL 193
Query: 313 KTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELR----- 367
+ L L L ++ + +L L VL L + + + + F Y LE
Sbjct: 194 EQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLD 253
Query: 368 -LSGNPLHVL---PDSTKQYSMRTIPTQIWKNFDFLVILFI-------LNETVFHENYTY 416
++ N L+ L S ++ +P ++ +L L + + ++ HE
Sbjct: 254 TMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLR- 312
Query: 417 PDLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLAN 476
L+E++L G L V+ ++ L +VF++ N+ +L L +
Sbjct: 313 --LQEIQLVGGQLAVVEP--YAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDS 368
Query: 477 NNLSMTSELSFQF 489
N L+ L + F
Sbjct: 369 NPLACDCRLLWVF 381
Score = 49 (22.3 bits), Expect = 3.3e-17, Sum P(2) = 3.3e-17
Identities = 27/118 (22%), Positives = 45/118 (38%)
Query: 507 THISPTVLRHNRAITSIKLVGNPWKCDCNIADMWEWATREKGDIGVLVGSTTPTEIGFGA 566
T + +V + ++ L NP CDC + +W + R + + + E G
Sbjct: 348 TTLEESVFHSVGNLETLILDSNPLACDCRL--LWVFRRRWRLNFNRQQPTCATPEFVQGK 405
Query: 567 SRKKKGLVC---YFDIFTTPTRKRPGRELFASTNKTWARYVKEADC--PSSKLFRPPR 619
K V YF R R +++F T ++V AD P + L+ PR
Sbjct: 406 EFKDFPDVLLPNYFTCRRARIRDRKAQQVFVDEGHT-VQFVCRADGDPPPAILWLSPR 462
>UNIPROTKB|Q56R09 [details] [associations]
symbol:Q56R09 "Toll-like receptor 9" species:37293 "Aotus
nancymaae" [GO:0035197 "siRNA binding" evidence=ISS] [GO:0045078
"positive regulation of interferon-gamma biosynthetic process"
evidence=ISS] [GO:0045356 "positive regulation of interferon-alpha
biosynthetic process" evidence=ISS] [GO:0045359 "positive
regulation of interferon-beta biosynthetic process" evidence=ISS]
Pfam:PF00560 InterPro:IPR000157 InterPro:IPR001611
InterPro:IPR027181 Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450
GO:GO:0007165 InterPro:IPR003591 SMART:SM00369 GO:GO:0005622
GO:GO:0035197 GO:GO:0045078 SUPFAM:SSF52200 GO:GO:0045359
GO:GO:0045356 HOVERGEN:HBG018601 PANTHER:PTHR24373:SF37
EMBL:AY788894 ProteinModelPortal:Q56R09 Uniprot:Q56R09
Length = 1032
Score = 247 (92.0 bits), Expect = 3.4e-17, P = 3.4e-17
Identities = 129/463 (27%), Positives = 204/463 (44%)
Query: 45 LYMQECTLSKINPQFFTNLTTLNKLDLSGNPLR--IIEPGVFDPLTSLEYLMLN-----R 97
L +++ +LS +N +F L L LDLS N L I + F LT L L L+ R
Sbjct: 289 LVLKDSSLSWLNASWFHGLGNLRVLDLSENFLYECITKTKAFQGLTQLRKLNLSFNYQKR 348
Query: 98 CNLTYIS--PSAFDNLNHLKTLELSQNKLKSHIDWTL-VLGNLGKLDTLDLRQSGISNLP 154
+ ++S PS F +L L+ L++ +S + TL L L +L TL L+ + I+
Sbjct: 349 VSFAHLSLAPS-FGSLFSLEELDMHGIFFRSLDETTLRPLARLSRLQTLHLQMNFINQAQ 407
Query: 155 DNVFANNTWLRNLNLAENELIDL-DVATTLGQ----NLVHLDSLDLSNCHLKGPLSEDAF 209
+F LR+++L++N + ++A T G+ V L DL+ + P SED
Sbjct: 408 LGIFGAFPGLRHVDLSDNRISGASELAATTGEADGGGRVWLQPGDLAPAPVDAPSSEDFT 467
Query: 210 VNATKLR-TLYLSGNPLSAA--DLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQE 266
N + L TL LS N L ++ L L L RLS NC + + + F T L+
Sbjct: 468 ANCSTLNFTLDLSRNNLVTVRPEMFARLSHLQCL-RLS-HNCIMQAVNGSQFLPLTDLRV 525
Query: 267 LDISHNPLIDAFTALLSPLESLEHLDMGYSN----LQRISRS-TFLK-MTSLKTLILSGN 320
LD+SHN L + L LE LD+ Y++ +Q + + +F+ + +L+ L L+ N
Sbjct: 526 LDLSHNKLDLYHEHSFTELPRLEALDLSYNSQPFGMQGVGHNFSFVAHLRTLRYLSLAHN 585
Query: 321 KLETLESGLFQNLTHLSVLELNNCGLTRL---NETVFHENYTYPDLEELRLSGNPLHVLP 377
+ + S ++ T L L+ + L R+ + H L L LS N LH L
Sbjct: 586 NIHSRVSPQLRS-TSLRALDFSGNALGRMWAEGDLYLHFFQGLSGLIWLDLSQNSLHTLL 644
Query: 378 DSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTYPDLEELRLSGNPLHVLPTGNX 437
T +T+ Q+ + D + F LE L L+GN L L G+
Sbjct: 645 PRTLGNLPKTL--QVLRLRDNKLAFFKWRSLALLRK-----LEALDLAGNQLKALTNGSL 697
Query: 438 XXXXXXXXXXXXXXXCK-IDYLPPNVFNNTRNITSLNLANNNL 479
C I ++ P F+ + + LNL+ N L
Sbjct: 698 PAMTRLRKLDVS---CNSISFVAPGFFSKAKKLRELNLSANAL 737
Score = 171 (65.3 bits), Expect = 5.8e-09, P = 5.8e-09
Identities = 97/338 (28%), Positives = 148/338 (43%)
Query: 41 SLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRI----------------IEPGVF 84
SL YL + + K+ P NLT L LD+ GN R + P F
Sbjct: 221 SLEYLLLSYNHIIKLAPGDLANLTALRVLDVGGNCRRCDHAPNPCMECPRHFPQLHPNTF 280
Query: 85 DPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLD 144
L+ LE L+L +L++++ S F L +L+ L+LS+N L I T L +L L+
Sbjct: 281 SHLSRLEGLVLKDSSLSWLNASWFHGLGNLRVLDLSENFLYECITKTKAFQGLTQLRKLN 340
Query: 145 LR---QSGIS----NLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSN 197
L Q +S +L + F + L L++ LD TTL + L L L
Sbjct: 341 LSFNYQKRVSFAHLSLAPS-FGSLFSLEELDMHGIFFRSLD-ETTL-RPLARLSRLQ--T 395
Query: 198 CHLKGPLSEDA----FVNATKLRTLYLSGNPLS-AADLSVALKPLTKLHRLSLRNCGLSR 252
HL+ A F LR + LS N +S A++L+ R+ L+ L+
Sbjct: 396 LHLQMNFINQAQLGIFGAFPGLRHVDLSDNRISGASELAATTGEADGGGRVWLQPGDLAP 455
Query: 253 LP--ANTFHRFT--CLQ---ELDISHNPLIDAFTALLSPLESLEHLDMGYSNL-QRISRS 304
P A + FT C LD+S N L+ + + L L+ L + ++ + Q ++ S
Sbjct: 456 APVDAPSSEDFTANCSTLNFTLDLSRNNLVTVRPEMFARLSHLQCLRLSHNCIMQAVNGS 515
Query: 305 TFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELN 342
FL +T L+ L LS NKL+ F L L L+L+
Sbjct: 516 QFLPLTDLRVLDLSHNKLDLYHEHSFTELPRLEALDLS 553
Score = 158 (60.7 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 82/292 (28%), Positives = 124/292 (42%)
Query: 93 LMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISN 152
L L+R NL + P F L+HL+ L LS N + ++ + L L L LDL + +
Sbjct: 477 LDLSRNNLVTVRPEMFARLSHLQCLRLSHNCIMQAVNGSQFLP-LTDLRVLDLSHNKLDL 535
Query: 153 LPDNVFANNTWLRNLNLAENELIDLDVATTLGQN---LVHLDSLD-LSNCHLKGPLSEDA 208
++ F L L+L+ N + +G N + HL +L LS H
Sbjct: 536 YHEHSFTELPRLEALDLSYNSQ-PFGMQG-VGHNFSFVAHLRTLRYLSLAHNNIHSRVSP 593
Query: 209 FVNATKLRTLYLSGNPL----SAADLSVAL-KPLTKLHRLSLRNCGLSRLPANTFHRFT- 262
+ +T LR L SGN L + DL + + L+ L L L L L T
Sbjct: 594 QLRSTSLRALDFSGNALGRMWAEGDLYLHFFQGLSGLIWLDLSQNSLHTLLPRTLGNLPK 653
Query: 263 CLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKL 322
LQ L + N L L+ L LE LD+ + L+ ++ + MT L+ L +S N +
Sbjct: 654 TLQVLRLRDNKLAFFKWRSLALLRKLEALDLAGNQLKALTNGSLPAMTRLRKLDVSCNSI 713
Query: 323 ETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLH 374
+ G F L L L+ L ++ + F L+ L +S NPLH
Sbjct: 714 SFVAPGFFSKAKKLRELNLSANALKTVDPSWFGP--LVGALKILDVSTNPLH 763
Score = 144 (55.7 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 104/382 (27%), Positives = 165/382 (43%)
Query: 29 IQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNL-TTLNKLDLSGNPLRIIEPGVFDPL 87
++ GA L +L +L ++ L+ + P+ NL ++L L LS N + + PG L
Sbjct: 188 LEVAPGALLGLGNLTHLSLKYNNLTVV-PR---NLPSSLEYLLLSYNHIIKLAPGDLANL 243
Query: 88 TSLEYLMLN-RCNLTYISPS-AFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDL 145
T+L L + C +P+ + H +L N SH L +L+ L L
Sbjct: 244 TALRVLDVGGNCRRCDHAPNPCMECPRHFP--QLHPNTF-SH---------LSRLEGLVL 291
Query: 146 RQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLK---- 201
+ S +S L + F LR L+L+EN L + T Q L L L+LS + K
Sbjct: 292 KDSSLSWLNASWFHGLGNLRVLDLSENFLYECITKTKAFQGLTQLRKLNLSFNYQKRVSF 351
Query: 202 GPLS-EDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLS---LRNCGLSRLPANT 257
LS +F + L L + G + D L+PL +L RL L+ +++
Sbjct: 352 AHLSLAPSFGSLFSLEELDMHGIFFRSLD-ETTLRPLARLSRLQTLHLQMNFINQAQLGI 410
Query: 258 FHRFTCLQELDISHNPLIDAFTALLSPLES-------LEHLDMGYSNLQRISRSTFL-KM 309
F F L+ +D+S N + A + E+ L+ D+ + + S F
Sbjct: 411 FGAFPGLRHVDLSDNRISGASELAATTGEADGGGRVWLQPGDLAPAPVDAPSSEDFTANC 470
Query: 310 TSLK-TLILSGNKLETLESGLFQNLTHLSVLELN-NCGLTRLNETVFHENYTYPDLEELR 367
++L TL LS N L T+ +F L+HL L L+ NC + +N + F DL L
Sbjct: 471 STLNFTLDLSRNNLVTVRPEMFARLSHLQCLRLSHNCIMQAVNGSQF---LPLTDLRVLD 527
Query: 368 LSGNPLHVLPDSTKQYSMRTIP 389
LS N L D ++S +P
Sbjct: 528 LSHNKL----DLYHEHSFTELP 545
Score = 140 (54.3 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 88/342 (25%), Positives = 149/342 (43%)
Query: 50 CTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFD 109
C ++ I P F + TL +L+LS N + + P + P SL L L+R N+ + ++
Sbjct: 110 CHMT-IEPNTFLAVPTLEELNLSYNSITAV-PAL--P-KSLVSLTLSRTNILVLDSASLA 164
Query: 110 NLNHLKTLELS-----QNKLKSHIDWT--LVLGNLGKLDTLDLRQSGISNLPDNVFANNT 162
L+ L+ L + +N + ++ +LG LG L L L+ + ++ +P N+ ++
Sbjct: 165 GLHALRFLFMDGNCYYKNPCRRALEVAPGALLG-LGNLTHLSLKYNNLTVVPRNLPSS-- 221
Query: 163 WLRNLNLAENELIDLDVATTLGQNLVHLDSLDLS-NC----HLKGPLSEDAFVNATKLRT 217
L L L+ N +I L NL L LD+ NC H P E
Sbjct: 222 -LEYLLLSYNHIIKLAPGDLA--NLTALRVLDVGGNCRRCDHAPNPCME------CPRHF 272
Query: 218 LYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDA 277
L N S L++L L L++ LS L A+ FH L+ LD+S N L +
Sbjct: 273 PQLHPNTFSH---------LSRLEGLVLKDSSLSWLNASWFHGLGNLRVLDLSENFLYEC 323
Query: 278 FTAL--LSPLESLEHLDMGYSNLQRISRS------TFLKMTSLKTLILSGNKLETLESGL 329
T L L L++ ++ +R+S + +F + SL+ L + G +L+
Sbjct: 324 ITKTKAFQGLTQLRKLNLSFNYQKRVSFAHLSLAPSFGSLFSLEELDMHGIFFRSLDETT 383
Query: 330 FQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGN 371
+ L LS L+ + + +N+ +P L + LS N
Sbjct: 384 LRPLARLSRLQTLHLQMNFINQAQLGIFGAFPGLRHVDLSDN 425
Score = 138 (53.6 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 81/284 (28%), Positives = 119/284 (41%)
Query: 52 LSKINPQFFTNLTTLNKLDLSGNPL-RIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDN 110
L + P+ F L+ L L LS N + + + F PLT L L L+ L +F
Sbjct: 484 LVTVRPEMFARLSHLQCLRLSHNCIMQAVNGSQFLPLTDLRVLDLSHNKLDLYHEHSFTE 543
Query: 111 LNHLKTLELSQNKLKSHIDWT----LVLGNLGKLDTLDLRQSGI-SNLPDNVFANNTWLR 165
L L+ L+LS N + + +L L L L + I S + + +T LR
Sbjct: 544 LPRLEALDLSYNSQPFGMQGVGHNFSFVAHLRTLRYLSLAHNNIHSRVSPQL--RSTSLR 601
Query: 166 NLNLAENEL----IDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATK-LRTLYL 220
L+ + N L + D+ Q L L LDLS L L N K L+ L L
Sbjct: 602 ALDFSGNALGRMWAEGDLYLHFFQGLSGLIWLDLSQNSLHTLLPR-TLGNLPKTLQVLRL 660
Query: 221 SGNPLSAADL-SVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFT 279
N L+ S+AL L KL L L L L + T L++LD+S N +
Sbjct: 661 RDNKLAFFKWRSLAL--LRKLEALDLAGNQLKALTNGSLPAMTRLRKLDVSCNSISFVAP 718
Query: 280 ALLSPLESLEHLDMGYSNLQRISRSTFLKMT-SLKTLILSGNKL 322
S + L L++ + L+ + S F + +LK L +S N L
Sbjct: 719 GFFSKAKKLRELNLSANALKTVDPSWFGPLVGALKILDVSTNPL 762
Score = 125 (49.1 bits), Expect = 0.00053, P = 0.00053
Identities = 80/268 (29%), Positives = 112/268 (41%)
Query: 22 INLNANPI-QPVEGA-FLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRII 79
+ L+ N I Q V G+ FL L L + L + FT L L LDLS N
Sbjct: 501 LRLSHNCIMQAVNGSQFLPLTDLRVLDLSHNKLDLYHEHSFTELPRLEALDLSYNSQPFG 560
Query: 80 EPGV---FD---PLTSLEYLMLNRCNL-TYISPSAFDNLNHLKTLELSQNKL-KSHIDWT 131
GV F L +L YL L N+ + +SP L+ L+ S N L + +
Sbjct: 561 MQGVGHNFSFVAHLRTLRYLSLAHNNIHSRVSPQL--RSTSLRALDFSGNALGRMWAEGD 618
Query: 132 LVLG---NLGKLDTLDLRQSGISNLPDNVFAN-NTWLRNLNLAENELIDLDVATTLGQNL 187
L L L L LDL Q+ + L N L+ L L +N+L + L
Sbjct: 619 LYLHFFQGLSGLIWLDLSQNSLHTLLPRTLGNLPKTLQVLRLRDNKLAFFKWRSLA--LL 676
Query: 188 VHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRN 247
L++LDL+ LK L+ + T+LR L +S N +S K KL L+L
Sbjct: 677 RKLEALDLAGNQLKA-LTNGSLPAMTRLRKLDVSCNSISFVAPGFFSKA-KKLRELNLSA 734
Query: 248 CGLSRLPANTFHRFT-CLQELDISHNPL 274
L + + F L+ LD+S NPL
Sbjct: 735 NALKTVDPSWFGPLVGALKILDVSTNPL 762
>UNIPROTKB|Q7Z2Q7 [details] [associations]
symbol:LRRC70 "Leucine-rich repeat-containing protein 70"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
GO:GO:0016021 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 InterPro:IPR000372 SMART:SM00013
EMBL:CH471137 HSSP:P24014 UniGene:Hs.482269 EMBL:AY280614
EMBL:AY358733 EMBL:AK123022 IPI:IPI00884949 RefSeq:NP_852607.3
UniGene:Hs.721348 ProteinModelPortal:Q7Z2Q7 SMR:Q7Z2Q7
STRING:Q7Z2Q7 PhosphoSite:Q7Z2Q7 DMDM:74759111 PRIDE:Q7Z2Q7
Ensembl:ENST00000334994 GeneID:100130733 KEGG:hsa:100130733
UCSC:uc011cqs.1 CTD:100130733 GeneCards:GC05P061912 HGNC:HGNC:35155
HPA:HPA013409 neXtProt:NX_Q7Z2Q7 PharmGKB:PA164722127
HOGENOM:HOG000113389 OMA:IYLKLDR OrthoDB:EOG42FSH5
GenomeRNAi:100130733 NextBio:20789232 ArrayExpress:Q7Z2Q7
Bgee:Q7Z2Q7 Genevestigator:Q7Z2Q7 Uniprot:Q7Z2Q7
Length = 622
Score = 243 (90.6 bits), Expect = 3.8e-17, P = 3.8e-17
Identities = 89/304 (29%), Positives = 145/304 (47%)
Query: 41 SLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNL 100
S ++LY+ +S IN T L +L L L + + + P F L L +L LN +
Sbjct: 61 STVFLYLTGNNISYINESELTGLHSLVALYLDNSNILYVYPKAFVQLRHLYFLFLNNNFI 120
Query: 101 TYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFAN 160
+ P F L +L+ L L N++ S + V +L + L+L+++ ++ L F
Sbjct: 121 KRLDPGIFKGLLNLRNLYLQYNQV-SFVPRG-VFNDLVSVQYLNLQRNRLTVLGSGTFVG 178
Query: 161 NTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYL 220
LR L+L+ N + L ++ + Q+L +L L L + +L + +AF LR L L
Sbjct: 179 MVALRILDLSNNNI--LRISESGFQHLENLACLYLGSNNLT-KVPSNAFEVLKSLRRLSL 235
Query: 221 SGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTA 280
S NP+ A A K L L L L+N + + + F L+ L +SHN L + +
Sbjct: 236 SHNPIEAIQ-PFAFKGLANLEYLLLKNSRIRNVTRDGFSGINNLKHLILSHNDLENLNSD 294
Query: 281 LLSPLESLEHLDMGYSNLQRISRSTFLKM-TSLKTLILSGNKLETLESGLFQNLTHLSVL 339
S L++L +L + + + I TF M SLK L LS N L L + + L+ L L
Sbjct: 295 TFSLLKNLIYLKLDRNRIISIDNDTFENMGASLKILNLSFNNLTALHPRVLKPLSSLIHL 354
Query: 340 ELNN 343
+ N+
Sbjct: 355 QANS 358
Score = 227 (85.0 bits), Expect = 2.2e-15, P = 2.2e-15
Identities = 79/275 (28%), Positives = 126/275 (45%)
Query: 19 LITINL-NANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLR 77
L+ + L N+N + AF+ R L +L++ + +++P F L L L L N +
Sbjct: 86 LVALYLDNSNILYVYPKAFVQLRHLYFLFLNNNFIKRLDPGIFKGLLNLRNLYLQYNQVS 145
Query: 78 IIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNL 137
+ GVF+ L S++YL L R LT + F + L+ L+LS N + I + +L
Sbjct: 146 FVPRGVFNDLVSVQYLNLQRNRLTVLGSGTFVGMVALRILDLSNNNIL-RISES-GFQHL 203
Query: 138 GKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSN 197
L L L + ++ +P N F LR L+L+ N + + G L +L+ L L N
Sbjct: 204 ENLACLYLGSNNLTKVPSNAFEVLKSLRRLSLSHNPIEAIQPFAFKG--LANLEYLLLKN 261
Query: 198 CHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANT 257
++ ++ D F L+ L LS N L + S L L L L + + +T
Sbjct: 262 SRIRN-VTRDGFSGINNLKHLILSHNDLENLN-SDTFSLLKNLIYLKLDRNRIISIDNDT 319
Query: 258 FHRF-TCLQELDISHNPLIDAFTALLSPLESLEHL 291
F L+ L++S N L +L PL SL HL
Sbjct: 320 FENMGASLKILNLSFNNLTALHPRVLKPLSSLIHL 354
Score = 222 (83.2 bits), Expect = 7.6e-15, P = 7.6e-15
Identities = 90/289 (31%), Positives = 131/289 (45%)
Query: 89 SLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQS 148
S +L L N++YI+ S L+ L L L + + V L L L L +
Sbjct: 61 STVFLYLTGNNISYINESELTGLHSLVALYLDNSNILYVYPKAFV--QLRHLYFLFLNNN 118
Query: 149 GISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDA 208
I L +F LRNL L N++ V + +LV + L+L L L
Sbjct: 119 FIKRLDPGIFKGLLNLRNLYLQYNQVSF--VPRGVFNDLVSVQYLNLQRNRLT-VLGSGT 175
Query: 209 FVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELD 268
FV LR L LS N + S + L L L L + L+++P+N F L+ L
Sbjct: 176 FVGMVALRILDLSNNNILRISES-GFQHLENLACLYLGSNNLTKVPSNAFEVLKSLRRLS 234
Query: 269 ISHNPLIDAFTAL-LSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLES 327
+SHNP I+A L +LE+L + S ++ ++R F + +LK LILS N LE L S
Sbjct: 235 LSHNP-IEAIQPFAFKGLANLEYLLLKNSRIRNVTRDGFSGINNLKHLILSHNDLENLNS 293
Query: 328 GLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVL 376
F L +L L+L+ + ++ F EN L+ L LS N L L
Sbjct: 294 DTFSLLKNLIYLKLDRNRIISIDNDTF-ENMG-ASLKILNLSFNNLTAL 340
Score = 180 (68.4 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 60/184 (32%), Positives = 90/184 (48%)
Query: 25 NANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVF 84
N N ++ E F +L LY+ L+K+ F L +L +L LS NP+ I+P F
Sbjct: 189 NNNILRISESGFQHLENLACLYLGSNNLTKVPSNAFEVLKSLRRLSLSHNPIEAIQPFAF 248
Query: 85 DPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLD 144
L +LEYL+L + ++ F +N+LK L LS N L++ T L L L L
Sbjct: 249 KGLANLEYLLLKNSRIRNVTRDGFSGINNLKHLILSHNDLENLNSDTFSL--LKNLIYLK 306
Query: 145 LRQSGISNLPDNVFAN-NTWLRNLNLAENELIDLD--VATTLGQNLVHLDSLDLS---NC 198
L ++ I ++ ++ F N L+ LNL+ N L L V L +L+HL + NC
Sbjct: 307 LDRNRIISIDNDTFENMGASLKILNLSFNNLTALHPRVLKPLS-SLIHLQANSNPWECNC 365
Query: 199 HLKG 202
L G
Sbjct: 366 KLLG 369
Score = 163 (62.4 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 74/306 (24%), Positives = 130/306 (42%)
Query: 20 ITINLNANPIQPVEGAFLVA-RSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRI 78
+ + L N I + + L SL+ LY+ + + P+ F L L L L+ N ++
Sbjct: 63 VFLYLTGNNISYINESELTGLHSLVALYLDNSNILYVYPKAFVQLRHLYFLFLNNNFIKR 122
Query: 79 IEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLG 138
++PG+F L +L L L ++++ F++L ++ L L +N+L T V G +
Sbjct: 123 LDPGIFKGLLNLRNLYLQYNQVSFVPRGVFNDLVSVQYLNLQRNRLTVLGSGTFV-GMVA 181
Query: 139 KLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNC 198
L LDL + I + ++ F + L L L N L V + + L L L LS+
Sbjct: 182 -LRILDLSNNNILRISESGFQHLENLACLYLGSNNLTK--VPSNAFEVLKSLRRLSLSHN 238
Query: 199 HLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTF 258
++ + AF L L L + + + L L L + L L ++TF
Sbjct: 239 PIEA-IQPFAFKGLANLEYLLLKNSRIRNVTRD-GFSGINNLKHLILSHNDLENLNSDTF 296
Query: 259 HRFTCLQELDISHNPLIDAFTALLSPL-ESLEHLDMGYSNLQRISRSTFLKMTSLKTLIL 317
L L + N +I + SL+ L++ ++NL + ++SL L
Sbjct: 297 SLLKNLIYLKLDRNRIISIDNDTFENMGASLKILNLSFNNLTALHPRVLKPLSSLIHLQA 356
Query: 318 SGNKLE 323
+ N E
Sbjct: 357 NSNPWE 362
Score = 102 (41.0 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 39/139 (28%), Positives = 69/139 (49%)
Query: 242 RLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRI 301
+++ RN GLS +P N F T L ++ N + + L+ L SL L + SN+ +
Sbjct: 43 QINCRNLGLSSIPKN-FPESTVF--LYLTGNNISYINESELTGLHSLVALYLDNSNILYV 99
Query: 302 SRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYP 361
F+++ L L L+ N ++ L+ G+F+ L +L L L ++ + VF++ +
Sbjct: 100 YPKAFVQLRHLYFLFLNNNFIKRLDPGIFKGLLNLRNLYLQYNQVSFVPRGVFNDLVS-- 157
Query: 362 DLEELRLSGNPLHVLPDST 380
++ L L N L VL T
Sbjct: 158 -VQYLNLQRNRLTVLGSGT 175
Score = 76 (31.8 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 17/88 (19%), Positives = 36/88 (40%)
Query: 455 IDYLPPNVFNNTRNITSLNLANNNLSMTSELSFQFXXXXXXXXXXXXXXXXXTHISPTVL 514
++ L + F+ +N+ L L N + +F+ H P VL
Sbjct: 288 LENLNSDTFSLLKNLIYLKLDRNRIISIDNDTFENMGASLKILNLSFNNLTALH--PRVL 345
Query: 515 RHNRAITSIKLVGNPWKCDCNIADMWEW 542
+ ++ ++ NPW+C+C + + +W
Sbjct: 346 KPLSSLIHLQANSNPWECNCKLLGLRDW 373
>UNIPROTKB|F1NJ43 [details] [associations]
symbol:NYX "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005622 "intracellular" evidence=IEA] [GO:0007601
"visual perception" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005622 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 OMA:NISFITP GeneTree:ENSGT00690000101803
EMBL:AADN02011030 IPI:IPI00576878 ProteinModelPortal:F1NJ43
Ensembl:ENSGALT00000030326 Uniprot:F1NJ43
Length = 466
Score = 240 (89.5 bits), Expect = 3.8e-17, P = 3.8e-17
Identities = 87/313 (27%), Positives = 144/313 (46%)
Query: 52 LSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNL 111
L +I +F +++N L N ++ + F L SL+ L LN N+++I+P AF L
Sbjct: 46 LGQIPSEFPCEASSIN---LDKNSIKFLSERAFGTLPSLKSLSLNHNNISFITPGAFKGL 102
Query: 112 NHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAE 171
L L+++ N+ ++ T L +L LDL + N+PD +F L+ L +
Sbjct: 103 PSLTELKMAHNEYIRYLH-TRTFTALRRLVKLDLADCNLFNIPDRIFIELPSLQELFCFQ 161
Query: 172 NELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLS 231
N + A +NL H+ L ++ ++ ++ TKL+ L L N ++
Sbjct: 162 NNFRRIPGAIRGMENLTHVY---LERNRIEA-VAYNSLQGLTKLKYLNLQDNRINVVH-E 216
Query: 232 VALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHL 291
A + K+ L L + +S LP N+F CL+ L++ N L + L LE L
Sbjct: 217 RAFQGCRKMEYLYLNDNLISELPENSFDGLRCLKMLNLGGNFLRNVSNTWFRDLVELEVL 276
Query: 292 DMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLEL--N----NCG 345
+ + + I F +TSL +L L+ N L TL +FQ + L L L N +C
Sbjct: 277 YLDRNRINYIEEGAFENLTSLVSLHLNSNNLTTLPFSVFQPVYFLGRLYLFRNPWECDCR 336
Query: 346 LTRLNETVFHENY 358
+ L E + ENY
Sbjct: 337 IEWLKEWM--ENY 347
Score = 187 (70.9 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 66/213 (30%), Positives = 103/213 (48%)
Query: 36 FLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLML 95
F R L+ L + +C L I + F L +L +L N R I PG + +L ++ L
Sbjct: 124 FTALRRLVKLDLADCNLFNIPDRIFIELPSLQELFCFQNNFRRI-PGAIRGMENLTHVYL 182
Query: 96 NRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPD 155
R + ++ ++ L LK L L N++ ++ K++ L L + IS LP+
Sbjct: 183 ERNRIEAVAYNSLQGLTKLKYLNLQDNRI--NVVHERAFQGCRKMEYLYLNDNLISELPE 240
Query: 156 NVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKL 215
N F L+ LNL N L +V+ T ++LV L+ L L + + E AF N T L
Sbjct: 241 NSFDGLRCLKMLNLGGNFL--RNVSNTWFRDLVELEVLYLDRNRINY-IEEGAFENLTSL 297
Query: 216 RTLYLSGNPLSAADLSVALKPLTKLHRLSL-RN 247
+L+L+ N L+ SV +P+ L RL L RN
Sbjct: 298 VSLHLNSNNLTTLPFSV-FQPVYFLGRLYLFRN 329
Score = 172 (65.6 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 77/280 (27%), Positives = 126/280 (45%)
Query: 95 LNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSG-ISNL 153
L++ ++ ++S AF L LK+L L+ N + S I G L L L + + I L
Sbjct: 62 LDKNSIKFLSERAFGTLPSLKSLSLNHNNI-SFITPGAFKG-LPSLTELKMAHNEYIRYL 119
Query: 154 PDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKG-PLSEDAFVNA 212
F T LR L + +L D ++ + + L SL C A
Sbjct: 120 HTRTF---TALRRL--VKLDLADCNLFNIPDRIFIELPSLQELFCFQNNFRRIPGAIRGM 174
Query: 213 TKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHN 272
L +YL N + A + +L+ LTKL L+L++ ++ + F ++ L ++ N
Sbjct: 175 ENLTHVYLERNRIEAVAYN-SLQGLTKLKYLNLQDNRINVVHERAFQGCRKMEYLYLNDN 233
Query: 273 PLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQN 332
+ + L L+ L++G + L+ +S + F + L+ L L N++ +E G F+N
Sbjct: 234 LISELPENSFDGLRCLKMLNLGGNFLRNVSNTWFRDLVELEVLYLDRNRINYIEEGAFEN 293
Query: 333 LTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNP 372
LT L L LN+ LT L +VF Y L L L NP
Sbjct: 294 LTSLVSLHLNSNNLTTLPFSVFQPVYF---LGRLYLFRNP 330
Score = 157 (60.3 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 44/118 (37%), Positives = 59/118 (50%)
Query: 8 YNDRRNLDNPGLITINLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTL 66
YN + L L +NL N I V E AF R + YLY+ + +S++ F L L
Sbjct: 192 YNSLQGLTK--LKYLNLQDNRINVVHERAFQGCRKMEYLYLNDNLISELPENSFDGLRCL 249
Query: 67 NKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKL 124
L+L GN LR + F L LE L L+R + YI AF+NL L +L L+ N L
Sbjct: 250 KMLNLGGNFLRNVSNTWFRDLVELEVLYLDRNRINYIEEGAFENLTSLVSLHLNSNNL 307
Score = 146 (56.5 bits), Expect = 9.3e-07, P = 9.3e-07
Identities = 45/169 (26%), Positives = 80/169 (47%)
Query: 10 DRRNLDNPGLITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKL 69
DR ++ P L + N + + GA +L ++Y++ + + LT L L
Sbjct: 145 DRIFIELPSLQELFCFQNNFRRIPGAIRGMENLTHVYLERNRIEAVAYNSLQGLTKLKYL 204
Query: 70 DLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHID 129
+L N + ++ F +EYL LN ++ + ++FD L LK L L N L++ +
Sbjct: 205 NLQDNRINVVHERAFQGCRKMEYLYLNDNLISELPENSFDGLRCLKMLNLGGNFLRNVSN 264
Query: 130 -WTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDL 177
W +L +L+ L L ++ I+ + + F N T L +L+L N L L
Sbjct: 265 TW---FRDLVELEVLYLDRNRINYIEEGAFENLTSLVSLHLNSNNLTTL 310
Score = 142 (55.0 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 75/273 (27%), Positives = 116/273 (42%)
Query: 21 TINLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNP-LRI 78
+INL+ N I+ + E AF SL L + +S I P F L +L +L ++ N +R
Sbjct: 59 SINLDKNSIKFLSERAFGTLPSLKSLSLNHNNISFITPGAFKGLPSLTELKMAHNEYIRY 118
Query: 79 IEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLG 138
+ F L L L L CNL I F L L+ L QN + I + +
Sbjct: 119 LHTRTFTALRRLVKLDLADCNLFNIPDRIFIELPSLQELFCFQNNFR-RIPGAI--RGME 175
Query: 139 KLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNC 198
L + L ++ I + N T L+ LNL +N I++ V Q ++ L L N
Sbjct: 176 NLTHVYLERNRIEAVAYNSLQGLTKLKYLNLQDNR-INV-VHERAFQGCRKMEYLYL-ND 232
Query: 199 HLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTF 258
+L L E++F L+ L L GN L + + L +L L L ++ + F
Sbjct: 233 NLISELPENSFDGLRCLKMLNLGGNFLRNVS-NTWFRDLVELEVLYLDRNRINYIEEGAF 291
Query: 259 HRFTCLQELDISHNPLIDAFTALLSPLESLEHL 291
T L L ++ N L ++ P+ L L
Sbjct: 292 ENLTSLVSLHLNSNNLTTLPFSVFQPVYFLGRL 324
>UNIPROTKB|Q50L44 [details] [associations]
symbol:LINGO1 "Leucine-rich repeat and immunoglobulin-like
domain-containing nogo receptor-interacting protein 1" species:9031
"Gallus gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005154 "epidermal
growth factor receptor binding" evidence=IEA] [GO:0021954 "central
nervous system neuron development" evidence=IEA] [GO:0031175
"neuron projection development" evidence=IEA] [GO:0043491 "protein
kinase B signaling cascade" evidence=IEA] [GO:0048715 "negative
regulation of oligodendrocyte differentiation" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0043491 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00690000101682 OrthoDB:EOG40S0F8
EMBL:AB195262 IPI:IPI00607536 RefSeq:NP_001019748.1
UniGene:Gga.13113 HSSP:Q05793 ProteinModelPortal:Q50L44 SMR:Q50L44
STRING:Q50L44 Ensembl:ENSGALT00000004272 GeneID:415344
KEGG:gga:415344 CTD:84894 HOVERGEN:HBG057546 InParanoid:Q50L44
OMA:RIRDRKP NextBio:20818967 ArrayExpress:Q50L44 Uniprot:Q50L44
Length = 613
Score = 241 (89.9 bits), Expect = 4.0e-17, Sum P(2) = 4.0e-17
Identities = 90/311 (28%), Positives = 146/311 (46%)
Query: 64 TTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNK 123
T +LDL N ++ + F LE L LN ++ I P AF+NL +L+TL L N+
Sbjct: 64 TETRQLDLGKNRIKTLNQDEFANYPHLEELELNENIISAIEPGAFNNLFNLRTLGLRSNR 123
Query: 124 LKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTL 183
LK I + G L L LD+ ++ I L D +F + L++L + +N+L+ +
Sbjct: 124 LKL-IPLGVFTG-LSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFS 181
Query: 184 GQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRL 243
G N L+ L L C+L + +A + L L L ++A + K L +L L
Sbjct: 182 GLN--SLEQLTLEKCNLTS-IPTEALSHLHGLIVLRLRHLNINAIR-DYSFKRLYRLKVL 237
Query: 244 SLRNCG-LSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRIS 302
+ + L + +N + L L I+H L + L L L++ Y+ + I
Sbjct: 238 EISHWPYLDTMTSNCLYGLN-LTSLSITHCNLTSIPYVSVRHLVYLRFLNLSYNPIVTIE 296
Query: 303 RSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPD 362
S + L+ + L G +L T+E F+ L +L +L ++ LT L E+ FH + +
Sbjct: 297 GSMLHDLLRLQEIQLVGGQLTTVEPFAFRGLNYLRILNVSGNLLTTLEESAFH---SVGN 353
Query: 363 LEELRLSGNPL 373
LE L L NPL
Sbjct: 354 LETLILDNNPL 364
Score = 237 (88.5 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 78/294 (26%), Positives = 137/294 (46%)
Query: 52 LSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNL 111
+ +N F N L +L+L+ N + IEPG F+ L +L L L L I F L
Sbjct: 76 IKTLNQDEFANYPHLEELELNENIISAIEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGL 135
Query: 112 NHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAE 171
++L L++S+NK+ +D+ + +L L +L++ + + + F+ L L L +
Sbjct: 136 SNLTKLDISENKIVILLDY--MFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEK 193
Query: 172 NELIDLDVATTLGQNLVHLDSLDLSNC-HLK-GPLSEDAFVNATKLRTLYLSGNPLSAAD 229
L + + L HL L + HL + + +F +L+ L +S P
Sbjct: 194 CNLTSIPT-----EALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTM 248
Query: 230 LSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLE 289
S L L L LS+ +C L+ +P + L+ L++S+NP++ ++L L L+
Sbjct: 249 TSNCLYGLN-LTSLSITHCNLTSIPYVSVRHLVYLRFLNLSYNPIVTIEGSMLHDLLRLQ 307
Query: 290 HLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNN 343
+ + L + F + L+ L +SGN L TLE F ++ +L L L+N
Sbjct: 308 EIQLVGGQLTTVEPFAFRGLNYLRILNVSGNLLTTLEESAFHSVGNLETLILDN 361
Score = 166 (63.5 bits), Expect = 7.1e-09, Sum P(2) = 7.1e-09
Identities = 72/303 (23%), Positives = 133/303 (43%)
Query: 22 INLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIE 80
++L N I+ + + F L L + E +S I P F NL L L L N L++I
Sbjct: 69 LDLGKNRIKTLNQDEFANYPHLEELELNENIISAIEPGAFNNLFNLRTLGLRSNRLKLIP 128
Query: 81 PGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKL 140
GVF L++L L ++ + + F +L +LK+LE+ N L +I G L L
Sbjct: 129 LGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLV-YISHRAFSG-LNSL 186
Query: 141 DTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLG-QNLVHLDSLDLSNCH 199
+ L L + ++++P ++ L L + ++++ + L L L++S+
Sbjct: 187 EQLTLEKCNLTSIPTEALSH---LHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWP 243
Query: 200 LKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFH 259
++ + L +L ++ L++ V+++ L L L+L + + + H
Sbjct: 244 YLDTMTSNCLYGLN-LTSLSITHCNLTSIPY-VSVRHLVYLRFLNLSYNPIVTIEGSMLH 301
Query: 260 RFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSG 319
LQE+ + L L L L++ + L + S F + +L+TLIL
Sbjct: 302 DLLRLQEIQLVGGQLTTVEPFAFRGLNYLRILNVSGNLLTTLEESAFHSVGNLETLILDN 361
Query: 320 NKL 322
N L
Sbjct: 362 NPL 364
Score = 163 (62.4 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 76/295 (25%), Positives = 123/295 (41%)
Query: 193 LDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSR 252
LDL +K L++D F N L L L+ N +SA + A L L L LR+ L
Sbjct: 69 LDLGKNRIK-TLNQDEFANYPHLEELELNENIISAIEPG-AFNNLFNLRTLGLRSNRLKL 126
Query: 253 LPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSL 312
+P F + L +LDIS N ++ + L +L+ L++G ++L IS F + SL
Sbjct: 127 IPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSL 186
Query: 313 KTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNP 372
+ L L L ++ + +L L VL L + + + + F Y L+ L +S P
Sbjct: 187 EQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYR---LKVLEISHWP 243
Query: 373 LHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTYPDLEELRLSGNPLHVL 432
S Y + I + + I ++ +V H Y L L LS NP+ V
Sbjct: 244 YLDTMTSNCLYGLNLTSLSI-THCNLTSIPYV---SVRHLVY----LRFLNLSYNPI-VT 294
Query: 433 PTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSF 487
G+ ++ + P F + LN++ N L+ E +F
Sbjct: 295 IEGSMLHDLLRLQEIQLVGG-QLTTVEPFAFRGLNYLRILNVSGNLLTTLEESAF 348
Score = 48 (22.0 bits), Expect = 4.0e-17, Sum P(2) = 4.0e-17
Identities = 27/113 (23%), Positives = 45/113 (39%)
Query: 520 ITSIKLVGNPWKCDCNIADMWEWATREKGDIGVLVGSTTPTEIGFGASRKKKGLVC---Y 576
+ ++ L NP CDC + +W + R + + + + E G K V Y
Sbjct: 354 LETLILDNNPLACDCRL--LWVFRRRWRLNFNKQQPTCSTPEFVQGKEFKDFPDVLLPNY 411
Query: 577 FDIFTTPTRKRPGRELFASTNKTWARYVKEADC--PSSKLFRPPRTN--SRKT 625
F R R +++F T +V AD P + ++ PR + S KT
Sbjct: 412 FTCRRARIRDRKPQQIFVDEGHT-VHFVCRADGDPPPAIMWLSPRKHLISTKT 463
>MGI|MGI:3045213 [details] [associations]
symbol:Tlr13 "toll-like receptor 13" species:10090 "Mus
musculus" [GO:0002755 "MyD88-dependent toll-like receptor signaling
pathway" evidence=IGI] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005768 "endosome" evidence=IDA] [GO:0006954
"inflammatory response" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0009615 "response to virus"
evidence=IMP] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IDA] [GO:0034178 "toll-like receptor 13 signaling pathway"
evidence=IDA] [GO:0042803 "protein homodimerization activity"
evidence=IDA] [GO:0043408 "regulation of MAPK cascade"
evidence=IGI] [GO:0045087 "innate immune response" evidence=IDA]
Pfam:PF00560 InterPro:IPR000157 InterPro:IPR001611
InterPro:IPR027196 Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450
SMART:SM00255 MGI:MGI:3045213 GO:GO:0016021 GO:GO:0042803
GO:GO:0005768 GO:GO:0006954 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 GO:GO:0045087 GO:GO:0010008 GO:GO:0009615
GO:GO:0019843 GO:GO:0002755 EMBL:AL672288 GO:GO:0043408
EMBL:CH466564 SUPFAM:SSF52200 EMBL:AY510706 EMBL:AK170044
EMBL:BC117913 EMBL:BC117914 IPI:IPI00342691 RefSeq:NP_991389.1
UniGene:Mm.336203 ProteinModelPortal:Q6R5N8 SMR:Q6R5N8
STRING:Q6R5N8 PhosphoSite:Q6R5N8 PRIDE:Q6R5N8
Ensembl:ENSMUST00000040065 GeneID:279572 KEGG:mmu:279572 CTD:279572
GeneTree:ENSGT00680000099674 HOGENOM:HOG000203220
HOVERGEN:HBG094977 InParanoid:Q6R5N8 OrthoDB:EOG4XGZZS
NextBio:393989 Bgee:Q6R5N8 CleanEx:MM_TLR13 Genevestigator:Q6R5N8
GermOnline:ENSMUSG00000033777 GO:GO:0034178 PANTHER:PTHR24367:SF26
Uniprot:Q6R5N8
Length = 991
Score = 246 (91.7 bits), Expect = 4.1e-17, P = 4.1e-17
Identities = 136/540 (25%), Positives = 230/540 (42%)
Query: 17 PGLITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPL 76
P L ++L N I ++ + SL +L + L ++N + L L L S N
Sbjct: 224 PCLERLDLTNNSIMYLDHSPRSLVSLTHLSFEGNKLRELNFSALS-LPNLTNLSASRNGN 282
Query: 77 RIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLK-SHIDWTLV-- 133
++I+ L L+ L L+ + + SA +L +L+ ++LS +L+ H+D V
Sbjct: 283 KVIQNVYLKTLPQLKSLNLSGTVIKLENLSA-KHLQNLRAMDLSNWELRHGHLDMKTVCH 341
Query: 134 -LGNLGKLDTLDLRQSGISNLPD-NVFANNTWLRNLNLAEN-ELIDLDVATTLGQNLVHL 190
LGNL KL+TL + Q ++N A T L L+L +N +LI L+ + L L
Sbjct: 342 LLGNLPKLETL-VFQKNVTNAEGIKQLAKCTRLLFLDLGQNSDLIYLNDSEF--NALPSL 398
Query: 191 DSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGL 250
L+L+ C L ++ + + L +L LS N + A PL L LSL +
Sbjct: 399 QKLNLNKCQLSF-INNRTWSSLQNLTSLDLSHNKFKSFP-DFAFSPLKHLEFLSLSRNPI 456
Query: 251 SRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMT 310
+ L F L+EL+++ ++ + +LE LD+G +N++ ++ TF +
Sbjct: 457 TELNNLAFSGLFALKELNLAACWIVTIDRYSFTQFPNLEVLDLGDNNIRTLNHGTFRPLK 516
Query: 311 SLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEEL---R 367
L++LILS N L+ LE F LT+L L+L L+ FHE + + LE+L +
Sbjct: 517 KLQSLILSHNCLKILEPNSFSGLTNLRSLDLMYNSLS-----YFHE-HLFSGLEKLLILK 570
Query: 368 LSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTYPDLEELRLSGN 427
L N + T QY I + K + + + L+EL L N
Sbjct: 571 LGFNKITYETTRTLQYPP-FIKLKSLKQLNLEGQRHGIQVVPSNFFQGLGSLQELLLGKN 629
Query: 428 PLHVLPTGNXX--XXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNLSMTSEL 485
P L + YL ++F N + + L L NNNL S +
Sbjct: 630 PSVFLDHHQFDPLINLTKLDISGTKDGDRSLYLNASLFQNLKRLKILRLENNNLE--SLV 687
Query: 486 SFQFXXXXXXXXXXXXXXXXXTHISPTVLRHNRAITSIKLVGNPWKCDCNIADMW--EWA 543
F I+ + L++ +++ + GN +C C+ ++W W+
Sbjct: 688 PDMFSSLQSLQVFSLRFNNLKV-INQSHLKNLKSLMFFDVYGNKLQCTCD--NLWFKNWS 744
Score = 225 (84.3 bits), Expect = 7.8e-15, P = 7.8e-15
Identities = 127/484 (26%), Positives = 216/484 (44%)
Query: 15 DNPGLIT-INLNANPIQPVEG-AFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLS 72
D P T +NL N IQ + +F +L+ L ++ ++ KI+ F L L L+L
Sbjct: 100 DIPRYTTHLNLTHNEIQVLPPWSFTNLSALVDLRLEWNSIWKIDEGAFRGLENLTLLNLV 159
Query: 73 GNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTL 132
N ++ + F+ L+SL+ L+L+ +T+I AF L LK L LS+N +
Sbjct: 160 ENKIQSVNNS-FEGLSSLKTLLLSHNQITHIHKDAFTPLIKLKYLSLSRNNISDFSGILE 218
Query: 133 VLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDS 192
+ +L L+ LDL + I L D+ + L +L+ N+L +L+ + NL +L +
Sbjct: 219 AVQHLPCLERLDLTNNSIMYL-DHSPRSLVSLTHLSFEGNKLRELNFSALSLPNLTNLSA 277
Query: 193 LDLSNCHLKGPLSEDAFVNAT-KLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGL- 250
N + ++ ++ +L++L LSG + +LS K L L + L N L
Sbjct: 278 SRNGN-----KVIQNVYLKTLPQLKSLNLSGTVIKLENLSA--KHLQNLRAMDLSNWELR 330
Query: 251 -SRLPANTF-HRFTCLQELD--ISHNPLIDAF-TALLSPLESLEHLDMGY-SNLQRISRS 304
L T H L +L+ + + +A L+ L LD+G S+L ++ S
Sbjct: 331 HGHLDMKTVCHLLGNLPKLETLVFQKNVTNAEGIKQLAKCTRLLFLDLGQNSDLIYLNDS 390
Query: 305 TFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLE 364
F + SL+ L L+ +L + + + +L +L+ L+L++ + F LE
Sbjct: 391 EFNALPSLQKLNLNKCQLSFINNRTWSSLQNLTSLDLSHNKFKSFPDFAFSP---LKHLE 447
Query: 365 ELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYT-YPDLEELR 423
L LS NP+ T+ ++ K + L +I+ T+ ++T +P+LE L
Sbjct: 448 FLSLSRNPI------TELNNLAFSGLFALKELN-LAACWIV--TIDRYSFTQFPNLEVLD 498
Query: 424 LSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNLSMTS 483
L N + L G KI L PN F+ N+ SL+L N+LS
Sbjct: 499 LGDNNIRTLNHGTFRPLKKLQSLILSHNCLKI--LEPNSFSGLTNLRSLDLMYNSLSYFH 556
Query: 484 ELSF 487
E F
Sbjct: 557 EHLF 560
Score = 169 (64.5 bits), Expect = 9.0e-09, P = 9.0e-09
Identities = 86/333 (25%), Positives = 148/333 (44%)
Query: 9 NDRRNLDNPGLITINLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLN 67
N+R L +++L+ N + + AF + L +L + ++++N F+ L L
Sbjct: 412 NNRTWSSLQNLTSLDLSHNKFKSFPDFAFSPLKHLEFLSLSRNPITELNNLAFSGLFALK 471
Query: 68 KLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSH 127
+L+L+ + I+ F +LE L L N+ ++ F L L++L LS N LK
Sbjct: 472 ELNLAACWIVTIDRYSFTQFPNLEVLDLGDNNIRTLNHGTFRPLKKLQSLILSHNCLKI- 530
Query: 128 IDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNL 187
++ G L L +LDL + +S +++F+ L L L N++ T
Sbjct: 531 LEPNSFSG-LTNLRSLDLMYNSLSYFHEHLFSGLEKLLILKLGFNKITYETTRTLQYPPF 589
Query: 188 VHLDSLDLSNC----HLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSV--ALKPLTKLH 241
+ L SL N H + + F L+ L L NP D L LTKL
Sbjct: 590 IKLKSLKQLNLEGQRHGIQVVPSNFFQGLGSLQELLLGKNPSVFLDHHQFDPLINLTKLD 649
Query: 242 RLSLRNCGLSR-LPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQR 300
++ S L A+ F L+ L + +N L + S L+SL+ + ++NL+
Sbjct: 650 ISGTKDGDRSLYLNASLFQNLKRLKILRLENNNLESLVPDMFSSLQSLQVFSLRFNNLKV 709
Query: 301 ISRSTFLKMTSLKTLILSGNKLE-TLESGLFQN 332
I++S + SL + GNKL+ T ++ F+N
Sbjct: 710 INQSHLKNLKSLMFFDVYGNKLQCTCDNLWFKN 742
Score = 154 (59.3 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 88/364 (24%), Positives = 154/364 (42%)
Query: 150 ISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLS-NCHLKGPLSEDA 208
I+NL + + + +LNL NE+ L + NL L L L N K + E A
Sbjct: 91 ITNLTEAISDIPRYTTHLNLTHNEIQVLPPWSFT--NLSALVDLRLEWNSIWK--IDEGA 146
Query: 209 FVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELD 268
F L L L N + + + S + L+ L L L + ++ + + F L+ L
Sbjct: 147 FRGLENLTLLNLVENKIQSVNNS--FEGLSSLKTLLLSHNQITHIHKDAFTPLIKLKYLS 204
Query: 269 ISHNPLIDAFTALLSPLESL---EHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETL 325
+S N + D F+ +L ++ L E LD+ +++ + S + SL L GNKL L
Sbjct: 205 LSRNNISD-FSGILEAVQHLPCLERLDLTNNSIMYLDHSP-RSLVSLTHLSFEGNKLREL 262
Query: 326 ESGLFQNLTHLSVLELNNCGLTRLNETVFHENY--TYPDLEELRLSGNPLHVLPDSTKQY 383
N + LS+ L N +R V Y T P L+ L LSG + + S K
Sbjct: 263 ------NFSALSLPNLTNLSASRNGNKVIQNVYLKTLPQLKSLNLSGTVIKLENLSAKHL 316
Query: 384 -SMRTIPTQIWK----NFDFLVILFILN-----ET-VFHENYTYPD-LEEL----RLS-- 425
++R + W+ + D + +L ET VF +N T + +++L RL
Sbjct: 317 QNLRAMDLSNWELRHGHLDMKTVCHLLGNLPKLETLVFQKNVTNAEGIKQLAKCTRLLFL 376
Query: 426 --GNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNLSMTS 483
G ++ + C++ ++ +++ +N+TSL+L++N
Sbjct: 377 DLGQNSDLIYLNDSEFNALPSLQKLNLNKCQLSFINNRTWSSLQNLTSLDLSHNKFKSFP 436
Query: 484 ELSF 487
+ +F
Sbjct: 437 DFAF 440
Score = 152 (58.6 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 80/283 (28%), Positives = 117/283 (41%)
Query: 5 HPVYNDRRNLDNPGLITI---NLNANPIQPVEG-AFLVARSLLYLYMQECTLSKINPQFF 60
+P+ + NL GL + NL A I ++ +F +L L + + + +N F
Sbjct: 454 NPI-TELNNLAFSGLFALKELNLAACWIVTIDRYSFTQFPNLEVLDLGDNNIRTLNHGTF 512
Query: 61 TNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELS 120
L L L LS N L+I+EP F LT+L L L +L+Y F L L L+L
Sbjct: 513 RPLKKLQSLILSHNCLKILEPNSFSGLTNLRSLDLMYNSLSYFHEHLFSGLEKLLILKLG 572
Query: 121 QNKLKSHIDWTLVLG---NLGKLDTLDL--RQSGISNLPDNVFANNTWLRNLNLAENELI 175
NK+ TL L L L+L ++ GI +P N F L+ L L +N +
Sbjct: 573 FNKITYETTRTLQYPPFIKLKSLKQLNLEGQRHGIQVVPSNFFQGLGSLQELLLGKNPSV 632
Query: 176 DLDVATTLGQNLVHLDSLDLSNCHLKGP----LSEDAFVNATKLRTLYLSGNPLSAADLS 231
LD L++L LD+S G L+ F N +L+ L L N L + +
Sbjct: 633 FLDHHQF--DPLINLTKLDISGTK-DGDRSLYLNASLFQNLKRLKILRLENNNLESL-VP 688
Query: 232 VALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPL 274
L L SLR L + + L D+ N L
Sbjct: 689 DMFSSLQSLQVFSLRFNNLKVINQSHLKNLKSLMFFDVYGNKL 731
>WB|WBGene00020649 [details] [associations]
symbol:sma-10 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0000003
"reproduction" evidence=IMP] [GO:0040018 "positive regulation of
multicellular organism growth" evidence=IMP] [GO:0007179
"transforming growth factor beta receptor signaling pathway"
evidence=IGI] [GO:0005887 "integral to plasma membrane"
evidence=IDA] [GO:0030511 "positive regulation of transforming
growth factor beta receptor signaling pathway" evidence=IDA]
[GO:0034713 "type I transforming growth factor beta receptor
binding" evidence=IPI] [GO:0005114 "type II transforming growth
factor beta receptor binding" evidence=IPI] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0005887 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0040018 GO:GO:0000003 GO:GO:0007179 GO:GO:0030511
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101816 HSSP:Q9UQH9 EMBL:FO081576
GeneID:176849 KEGG:cel:CELE_T21D12.9 CTD:176849 UCSC:T21D12.9c.1
NextBio:894278 RefSeq:NP_499896.1 ProteinModelPortal:Q965M2
SMR:Q965M2 STRING:Q965M2 EnsemblMetazoa:T21D12.9a.1
EnsemblMetazoa:T21D12.9a.2 WormBase:T21D12.9a HOGENOM:HOG000022300
InParanoid:Q965M2 OMA:PIATIHP ArrayExpress:Q965M2 Uniprot:Q965M2
Length = 881
Score = 245 (91.3 bits), Expect = 4.3e-17, P = 4.3e-17
Identities = 105/387 (27%), Positives = 176/387 (45%)
Query: 45 LYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYIS 104
L + + + I+ L LD+S N +R I+ F L +L+ L + + L I
Sbjct: 57 LLLSDNEIESIDKSRLKGFYFLQTLDISNNIIRHIDFEFFYNLPNLKILNIRKNRLARI- 115
Query: 105 PSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWL 164
P L HL+ L+L N L S + + L L + ++DL ++ IS LP + +
Sbjct: 116 PRGSHELGHLEKLDLRSN-LISTVT-SEELSYLAAVRSVDLSRNLISYLPKPTTSAKVNI 173
Query: 165 RNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNP 224
L+LA N + D + T + L +L L+ H+ L++ +F KL +L L+ N
Sbjct: 174 EKLDLASNSITD--IGTDHFSSFNTLVTLKLARNHIT-TLNQFSFSRLRKLESLDLTRNM 230
Query: 225 LSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSP 284
+ +A L L +SL + RL F+ L+ L++S N + +
Sbjct: 231 IREVRF-LAFNQLPSLQNVSLARNDVYRLDDGMFYACEGLKHLNLSTNRVQAVTEGWMFG 289
Query: 285 LESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNC 344
L SLE LD+ Y+ +Q S++ LK L L N++++L SG F+ L L L L+
Sbjct: 290 LTSLEVLDLSYNQIQSFHISSWSHTPKLKWLSLHSNRIQSLPSGSFRVLRQLEELILSAN 349
Query: 345 GLTRLNETVFHENYTYPDLEELRLSGNPLHV-LPDSTKQYSMRTIPTQIWKNFDFLVI-L 402
+ L++ L +L LS N L V + D Y+ ++P ++ F L
Sbjct: 350 SIDSLHKFAL---VGMSSLHKLDLSSNTLAVCVEDGAVLYNT-SMP--FLRSLRFTNNQL 403
Query: 403 FILNETVFHENYTYPDLEELRLSGNPL 429
++ + F +P LEEL L+ NP+
Sbjct: 404 RVIPKRAFER---FPALEELDLTDNPI 427
Score = 215 (80.7 bits), Expect = 7.9e-14, P = 7.9e-14
Identities = 90/377 (23%), Positives = 168/377 (44%)
Query: 57 PQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKT 116
P N T + L LS N + I+ L+ L ++ + +I F NL +LK
Sbjct: 47 PTTIPNNTRI--LLLSDNEIESIDKSRLKGFYFLQTLDISNNIIRHIDFEFFYNLPNLKI 104
Query: 117 LELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELID 176
L + +N+L + LG+L KLD LR + IS + + +R+++L+ N +
Sbjct: 105 LNIRKNRLARIPRGSHELGHLEKLD---LRSNLISTVTSEELSYLAAVRSVDLSRNLISY 161
Query: 177 LDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKP 236
L TT + V+++ LDL++ + + D F + L TL L+ N ++ + +
Sbjct: 162 LPKPTTSAK--VNIEKLDLASNSITD-IGTDHFSSFNTLVTLKLARNHITTLN-QFSFSR 217
Query: 237 LTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYS 296
L KL L L + + F++ LQ + ++ N + + E L+HL++ +
Sbjct: 218 LRKLESLDLTRNMIREVRFLAFNQLPSLQNVSLARNDVYRLDDGMFYACEGLKHLNLSTN 277
Query: 297 NLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHE 356
+Q ++ +TSL+ L LS N++++ + + L L L++ + L F
Sbjct: 278 RVQAVTEGWMFGLTSLEVLDLSYNQIQSFHISSWSHTPKLKWLSLHSNRIQSLPSGSFR- 336
Query: 357 NYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTY 416
LEEL LS N + DS ++++ + + + + + + N +
Sbjct: 337 --VLRQLEELILSANSI----DSLHKFALVGMSSLHKLDLSSNTLAVCVEDGAVLYNTSM 390
Query: 417 PDLEELRLSGNPLHVLP 433
P L LR + N L V+P
Sbjct: 391 PFLRSLRFTNNQLRVIP 407
Score = 200 (75.5 bits), Expect = 3.4e-12, P = 3.4e-12
Identities = 91/367 (24%), Positives = 160/367 (43%)
Query: 17 PGLITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPL 76
P L +N+ N + + L L ++ +S + + + L + +DLS N +
Sbjct: 100 PNLKILNIRKNRLARIPRGSHELGHLEKLDLRSNLISTVTSEELSYLAAVRSVDLSRNLI 159
Query: 77 RIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGN 136
+ ++E L L ++T I F + N L TL+L++N + + ++
Sbjct: 160 SYLPKPTTSAKVNIEKLDLASNSITDIGTDHFSSFNTLVTLKLARNHITTLNQFSF--SR 217
Query: 137 LGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLG-QNLVHLDSLDL 195
L KL++LDL ++ I + F L+N++LA N++ LD + L HL+ L
Sbjct: 218 LRKLESLDLTRNMIREVRFLAFNQLPSLQNVSLARNDVYRLDDGMFYACEGLKHLN---L 274
Query: 196 SNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPA 255
S ++ ++E T L L LS N + + +S + KL LSL + + LP+
Sbjct: 275 STNRVQA-VTEGWMFGLTSLEVLDLSYNQIQSFHIS-SWSHTPKLKWLSLHSNRIQSLPS 332
Query: 256 NTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQR-ISRSTFLKMTS--- 311
+F L+EL +S N + L + SL LD+ + L + L TS
Sbjct: 333 GSFRVLRQLEELILSANSIDSLHKFALVGMSSLHKLDLSSNTLAVCVEDGAVLYNTSMPF 392
Query: 312 LKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGN 371
L++L + N+L + F+ L L+L + + ++ F P LE RL N
Sbjct: 393 LRSLRFTNNQLRVIPKRAFERFPALEELDLTDNPIATIHPEAFE-----P-LELKRLVMN 446
Query: 372 PLHVLPD 378
+L D
Sbjct: 447 SSSILCD 453
>UNIPROTKB|G3X6G8 [details] [associations]
symbol:LGR6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016500 "protein-hormone receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR002131 PRINTS:PR00373
PROSITE:PS51450 GO:GO:0016021 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0016500
GeneTree:ENSGT00650000092962 OMA:AYGKAPS EMBL:DAAA02043707
EMBL:DAAA02043700 EMBL:DAAA02043701 EMBL:DAAA02043702
EMBL:DAAA02043703 EMBL:DAAA02043704 EMBL:DAAA02043705
EMBL:DAAA02043706 Ensembl:ENSBTAT00000006288 Uniprot:G3X6G8
Length = 943
Score = 245 (91.3 bits), Expect = 4.8e-17, P = 4.8e-17
Identities = 134/413 (32%), Positives = 175/413 (42%)
Query: 42 LLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLT 101
LL++ E LS + P LT LDLS N L + PGVF L LE L L+ L
Sbjct: 44 LLWVDCSERGLSTV-PAGLDPLTAY--LDLSMNSLTELWPGVFHHLRFLEELRLSGNRLA 100
Query: 102 YISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANN 161
+I AF L+ LK L L N+L I L L L +L L + IS +PD F
Sbjct: 101 HIPGQAFSGLSSLKILMLQNNRLGG-IP-AEALWELPGLQSLRLDANLISLVPDRSFEGL 158
Query: 162 TWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLK--GPLSEDAFVNATKLRTLY 219
T LR+L L +N L ++ V L HL +L L G + + AF N + L L+
Sbjct: 159 TSLRHLWLDDNALTEIPVRA-----LSHLRALQAVTLALNRIGRVPDYAFWNLSSLVVLH 213
Query: 220 LSGNPLSAADLSVALKPLTKLHRLSLRNCG-LSRLPANTFHRFTCLQELDISHNPLIDAF 278
L N + + + L L L L NC L P LQEL HN I A
Sbjct: 214 LHNNRIRHLGAH-SFEGLQNLETLDL-NCNQLHEFPV-AIQTLGRLQELGF-HNNNIRAI 269
Query: 279 T--ALL-SPLESLEHLDMGYSN-LQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLT 334
A L +PL H Y N +Q + RS F + L TL L+G + E + T
Sbjct: 270 PEKAFLGNPLLQTIHF---YDNPIQFVGRSAFQHLPGLHTLSLNG-ATDIQEFPDLRGTT 325
Query: 335 HLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQ--- 391
L L L GL RL + + P L L LS N + LP + I Q
Sbjct: 326 SLESLTLTRAGLQRLPPGMCQQ---LPRLRVLELSHNLIEGLPSLRGCQKLEEIGLQHNR 382
Query: 392 IWK----NFDFLVILFILN------ETVFHENY-TYPDLEELRLSGNPLHVLP 433
IW+ F L L L+ ++ E + T L +L L+GN L VLP
Sbjct: 383 IWEVRADTFRELTFLRSLDLSWNAIRSIHPEAFSTLRSLVKLDLTGNQLSVLP 435
Score = 241 (89.9 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 101/372 (27%), Positives = 164/372 (44%)
Query: 1 MWQGHPVYNDRRNLDNPGLITINLNANPIQPVEG-AFLVARSLLYLYMQECTLSKINPQF 59
+W G V++ R L+ + L+ N + + G AF SL L +Q L I +
Sbjct: 78 LWPG--VFHHLRFLEE-----LRLSGNRLAHIPGQAFSGLSSLKILMLQNNRLGGIPAEA 130
Query: 60 FTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLEL 119
L L L L N + ++ F+ LTSL +L L+ LT I A +L L+ + L
Sbjct: 131 LWELPGLQSLRLDANLISLVPDRSFEGLTSLRHLWLDDNALTEIPVRALSHLRALQAVTL 190
Query: 120 SQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDV 179
+ N++ D+ NL L L L + I +L + F L L+L N+L + V
Sbjct: 191 ALNRIGRVPDYAF--WNLSSLVVLHLHNNRIRHLGAHSFEGLQNLETLDLNCNQLHEFPV 248
Query: 180 ATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLS------------- 226
A Q L L L N +++ + E AF+ L+T++ NP+
Sbjct: 249 AI---QTLGRLQELGFHNNNIRA-IPEKAFLGNPLLQTIHFYDNPIQFVGRSAFQHLPGL 304
Query: 227 -------AADLSVA--LKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDA 277
A D+ L+ T L L+L GL RLP + L+ L++SHN LI+
Sbjct: 305 HTLSLNGATDIQEFPDLRGTTSLESLTLTRAGLQRLPPGMCQQLPRLRVLELSHN-LIEG 363
Query: 278 FTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLS 337
+L + LE + + ++ + + TF ++T L++L LS N + ++ F L L
Sbjct: 364 LPSLRG-CQKLEEIGLQHNRIWEVRADTFRELTFLRSLDLSWNAIRSIHPEAFSTLRSLV 422
Query: 338 VLELNNCGLTRL 349
L+L L+ L
Sbjct: 423 KLDLTGNQLSVL 434
Score = 220 (82.5 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 82/324 (25%), Positives = 153/324 (47%)
Query: 17 PGLITINLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNP 75
PGL ++ L+AN I V + +F SL +L++ + L++I + ++L L + L+ N
Sbjct: 135 PGLQSLRLDANLISLVPDRSFEGLTSLRHLWLDDNALTEIPVRALSHLRALQAVTLALNR 194
Query: 76 LRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLG 135
+ + F L+SL L L+ + ++ +F+ L +L+TL+L+ N+L H ++ + +
Sbjct: 195 IGRVPDYAFWNLSSLVVLHLHNNRIRHLGAHSFEGLQNLETLDLNCNQL--H-EFPVAIQ 251
Query: 136 NLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDL 195
LG+L L + I +P+ F N L+ ++ +N + V + Q+L L +L L
Sbjct: 252 TLGRLQELGFHNNNIRAIPEKAFLGNPLLQTIHFYDNPI--QFVGRSAFQHLPGLHTLSL 309
Query: 196 SNCHLKGPLSEDAFVNAT-KLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLP 254
+ + E + T L +L L+ L + + L +L L L + + LP
Sbjct: 310 NGAT---DIQEFPDLRGTTSLESLTLTRAGLQRLPPGMC-QQLPRLRVLELSHNLIEGLP 365
Query: 255 ANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKT 314
+ L+E+ + HN + + L L LD+ ++ ++ I F + SL
Sbjct: 366 S--LRGCQKLEEIGLQHNRIWEVRADTFRELTFLRSLDLSWNAIRSIHPEAFSTLRSLVK 423
Query: 315 LILSGNKLETLESGLFQNLTHLSV 338
L L+GN+L L L HL +
Sbjct: 424 LDLTGNQLSVLPLAGLGGLVHLKL 447
Score = 155 (59.6 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 69/247 (27%), Positives = 105/247 (42%)
Query: 138 GKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSN 197
G L +D + G+S +P + +L +L+ N L +L +L L+ L LS
Sbjct: 42 GILLWVDCSERGLSTVPAGLDPLTAYL---DLSMNSLTELWPGVF--HHLRFLEELRLSG 96
Query: 198 CHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANT 257
L + AF + L+ L L N L AL L L L L +S +P +
Sbjct: 97 NRL-AHIPGQAFSGLSSLKILMLQNNRLGGIPAE-ALWELPGLQSLRLDANLISLVPDRS 154
Query: 258 FHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLIL 317
F T L+ L + N L + LS L +L+ + + + + R+ F ++SL L L
Sbjct: 155 FEGLTSLRHLWLDDNALTEIPVRALSHLRALQAVTLALNRIGRVPDYAFWNLSSLVVLHL 214
Query: 318 SGNKLETLESGLFQNLTHLSVLELNNCG-----------LTRLNETVFHENYTYPDLEEL 366
N++ L + F+ L +L L+LN C L RL E FH N + E
Sbjct: 215 HNNRIRHLGAHSFEGLQNLETLDLN-CNQLHEFPVAIQTLGRLQELGFHNN-NIRAIPEK 272
Query: 367 RLSGNPL 373
GNPL
Sbjct: 273 AFLGNPL 279
>UNIPROTKB|P40197 [details] [associations]
symbol:GP5 "Platelet glycoprotein V" species:9606 "Homo
sapiens" [GO:0005518 "collagen binding" evidence=IEA] [GO:0007160
"cell-matrix adhesion" evidence=IEA] [GO:0010544 "negative
regulation of platelet activation" evidence=IEA] [GO:0005887
"integral to plasma membrane" evidence=TAS] [GO:0007155 "cell
adhesion" evidence=NAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007596 "blood coagulation" evidence=TAS] [GO:0007597 "blood
coagulation, intrinsic pathway" evidence=TAS] [GO:0030168 "platelet
activation" evidence=TAS] Reactome:REACT_604 Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0030168 GO:GO:0005887
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007597 GO:GO:0007155 GO:GO:0007160
InterPro:IPR000372 SMART:SM00013 GO:GO:0010544 EMBL:L11238
EMBL:Z23091 IPI:IPI00027410 PIR:A48030 RefSeq:NP_004479.1
UniGene:Hs.73734 ProteinModelPortal:P40197 SMR:P40197 STRING:P40197
PhosphoSite:P40197 DMDM:729616 PaxDb:P40197 PeptideAtlas:P40197
PRIDE:P40197 DNASU:2814 Ensembl:ENST00000323007
Ensembl:ENST00000401815 GeneID:2814 KEGG:hsa:2814 UCSC:uc003ftv.1
CTD:2814 GeneCards:GC03M194115 HGNC:HGNC:4443 MIM:173511
neXtProt:NX_P40197 PharmGKB:PA28823 HOGENOM:HOG000112798
HOVERGEN:HBG005906 InParanoid:P40197 KO:K06260 OMA:AMIKIGQ
OrthoDB:EOG4JHCFD PhylomeDB:P40197 GenomeRNAi:2814 NextBio:11093
PMAP-CutDB:P40197 ArrayExpress:P40197 Bgee:P40197 CleanEx:HS_GP5
Genevestigator:P40197 GermOnline:ENSG00000178732 Uniprot:P40197
Length = 560
Score = 241 (89.9 bits), Expect = 5.0e-17, P = 5.0e-17
Identities = 96/334 (28%), Positives = 146/334 (43%)
Query: 45 LYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYIS 104
L + + +S + P F++L L L LS N + + + D + LE L L+ L I
Sbjct: 79 LMISDSHISAVAPGTFSDLIKLKTLRLSRNKITHLPGALLDKMVLLEQLFLDHNALRGID 138
Query: 105 PSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWL 164
+ F L +L+ L L+QN+L + +L NL L LDL + +++LP + L
Sbjct: 139 QNMFQKLVNLQELALNQNQL-DFLPASLFT-NLENLKLLDLSGNNLTHLPKGLLGAQAKL 196
Query: 165 RNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNP 224
L L N L+ LD + L +L L L H++ ++ AF L +L LS N
Sbjct: 197 ERLLLHSNRLVSLD--SGLLNSLGALTELQFHRNHIRS-IAPGAFDRLPNLSSLTLSRNH 253
Query: 225 LSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSP 284
L+ ++ L L L+L L+ LP F LQEL ++ L A
Sbjct: 254 LAFLPSALFLHS-HNLTLLTLFENPLAELPGVLFGEMGGLQELWLNRTQLRTLPAAAFRN 312
Query: 285 LESLEHLDMGYS-NLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNN 343
L L +L + S L + + F + L+ L L N L L GL + L L + L
Sbjct: 313 LSRLRYLGVTLSPRLSALPQGAFQGLGELQVLALHSNGLTALPDGLLRGLGKLRQVSLRR 372
Query: 344 CGLTRLNETVFHENYTYPDLEELRLSGNPLHVLP 377
L L +F N + LE ++L N L LP
Sbjct: 373 NRLRALPRALFR-NLS--SLESVQLDHNQLETLP 403
Score = 240 (89.5 bits), Expect = 6.4e-17, P = 6.4e-17
Identities = 97/340 (28%), Positives = 149/340 (43%)
Query: 34 GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYL 93
G F L L + ++ + + L +L L N LR I+ +F L +L+ L
Sbjct: 92 GTFSDLIKLKTLRLSRNKITHLPGALLDKMVLLEQLFLDHNALRGIDQNMFQKLVNLQEL 151
Query: 94 MLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNL 153
LN+ L ++ S F NL +LK L+LS N L +H+ L LG KL+ L L + + +L
Sbjct: 152 ALNQNQLDFLPASLFTNLENLKLLDLSGNNL-THLPKGL-LGAQAKLERLLLHSNRLVSL 209
Query: 154 PDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNAT 213
+ + L L N + +A L +L SL LS HL L F+++
Sbjct: 210 DSGLLNSLGALTELQFHRNHI--RSIAPGAFDRLPNLSSLTLSRNHLAF-LPSALFLHSH 266
Query: 214 KLRTLYLSGNPLSAADL-SVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHN 272
L L L NPL A+L V + L L L L LPA F + L+ L ++ +
Sbjct: 267 NLTLLTLFENPL--AELPGVLFGEMGGLQELWLNRTQLRTLPAAAFRNLSRLRYLGVTLS 324
Query: 273 PLIDAFT-ALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQ 331
P + A L L+ L + + L + + L+ + L N+L L LF+
Sbjct: 325 PRLSALPQGAFQGLGELQVLALHSNGLTALPDGLLRGLGKLRQVSLRRNRLRALPRALFR 384
Query: 332 NLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGN 371
NL+ L ++L++ L L VF P L E+ L N
Sbjct: 385 NLSSLESVQLDHNQLETLPGDVFG---ALPRLTEVLLGHN 421
Score = 237 (88.5 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 108/375 (28%), Positives = 168/375 (44%)
Query: 64 TTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNK 123
T L + L G +++ F +T L+ LM++ +++ ++P F +L LKTL LS+NK
Sbjct: 50 TNLTHILLFGMGRGVLQSQSFSGMTVLQRLMISDSHISAVAPGTFSDLIKLKTLRLSRNK 109
Query: 124 LKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTL 183
+ +H+ L L + L+ L L + + + N+F L+ L L +N+L D + +L
Sbjct: 110 I-THLPGAL-LDKMVLLEQLFLDHNALRGIDQNMFQKLVNLQELALNQNQL-DF-LPASL 165
Query: 184 GQNLVHLDSLDLSN---CHL-KGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTK 239
NL +L LDLS HL KG L A KL L L N L + D S L L
Sbjct: 166 FTNLENLKLLDLSGNNLTHLPKGLLGAQA-----KLERLLLHSNRLVSLD-SGLLNSLGA 219
Query: 240 LHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQ 299
L L + + F R L L +S N L +AL +L L + + L
Sbjct: 220 LTELQFHRNHIRSIAPGAFDRLPNLSSLTLSRNHLAFLPSALFLHSHNLTLLTLFENPLA 279
Query: 300 RISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELN-NCGLTRLNETVFHENY 358
+ F +M L+ L L+ +L TL + F+NL+ L L + + L+ L + F
Sbjct: 280 ELPGVLFGEMGGLQELWLNRTQLRTLPAAAFRNLSRLRYLGVTLSPRLSALPQGAFQG-- 337
Query: 359 TYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTYPD 418
+L+ L L N L LPD + + + +N L L +F N +
Sbjct: 338 -LGELQVLALHSNGLTALPDGLLRGLGKLRQVSLRRNR-----LRALPRALFR-NLS--S 388
Query: 419 LEELRLSGNPLHVLP 433
LE ++L N L LP
Sbjct: 389 LESVQLDHNQLETLP 403
Score = 223 (83.6 bits), Expect = 4.8e-15, P = 4.8e-15
Identities = 89/324 (27%), Positives = 142/324 (43%)
Query: 55 INPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHL 114
+ Q F+ +T L +L +S + + + PG F L L+ L L+R +T++ + D + L
Sbjct: 65 LQSQSFSGMTVLQRLMISDSHISAVAPGTFSDLIKLKTLRLSRNKITHLPGALLDKMVLL 124
Query: 115 KTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENEL 174
+ L L N L+ ID + L L L L Q+ + LP ++F N L+ L+L+ N L
Sbjct: 125 EQLFLDHNALRG-IDQNM-FQKLVNLQELALNQNQLDFLPASLFTNLENLKLLDLSGNNL 182
Query: 175 IDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVAL 234
L LG L+ L L + L L + L L N + + A
Sbjct: 183 THLPKGL-LGAQ-AKLERLLLHSNRLVS-LDSGLLNSLGALTELQFHRNHIRSIAPG-AF 238
Query: 235 KPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMG 294
L L L+L L+ LP+ F L L + NPL + L + L+ L +
Sbjct: 239 DRLPNLSSLTLSRNHLAFLPSALFLHSHNLTLLTLFENPLAELPGVLFGEMGGLQELWLN 298
Query: 295 YSNLQRISRSTFLKMTSLKTL-ILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETV 353
+ L+ + + F ++ L+ L + +L L G FQ L L VL L++ GLT L + +
Sbjct: 299 RTQLRTLPAAAFRNLSRLRYLGVTLSPRLSALPQGAFQGLGELQVLALHSNGLTALPDGL 358
Query: 354 FHENYTYPDLEELRLSGNPLHVLP 377
L ++ L N L LP
Sbjct: 359 LRG---LGKLRQVSLRRNRLRALP 379
Score = 195 (73.7 bits), Expect = 5.6e-12, P = 5.6e-12
Identities = 93/394 (23%), Positives = 152/394 (38%)
Query: 190 LDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCG 249
L L +S+ H+ ++ F + KL+TL LS N ++ L + L +L L +
Sbjct: 76 LQRLMISDSHISA-VAPGTFSDLIKLKTLRLSRNKITHLP-GALLDKMVLLEQLFLDHNA 133
Query: 250 LSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKM 309
L + N F + LQEL ++ N L +L + LE+L+ LD+ +NL + +
Sbjct: 134 LRGIDQNMFQKLVNLQELALNQNQLDFLPASLFTNLENLKLLDLSGNNLTHLPKGLLGAQ 193
Query: 310 TSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLS 369
L+ L+L N+L +L+SGL +L L+ L+ + + + F P+L L LS
Sbjct: 194 AKLERLLLHSNRLVSLDSGLLNSLGALTELQFHRNHIRSIAPGAFDR---LPNLSSLTLS 250
Query: 370 GNPLHVLPDSTKQYSMRTIPTQIWKN--FDFLVILF---------ILNETVFHE--NYTY 416
N L LP + +S +++N + +LF LN T +
Sbjct: 251 RNHLAFLPSALFLHSHNLTLLTLFENPLAELPGVLFGEMGGLQELWLNRTQLRTLPAAAF 310
Query: 417 PDLEELRLSG---NP-LHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSL 472
+L LR G +P L LP G + LP + + +
Sbjct: 311 RNLSRLRYLGVTLSPRLSALPQGAFQGLGELQVLALHSNG--LTALPDGLLRGLGKLRQV 368
Query: 473 NLANNNLSMTSELSFQFXXXXXXXXXXXXXXXXXTHISPTVLRHNRAITSIKLVGNPWKC 532
+L N L F+ + V +T + L N W+C
Sbjct: 369 SLRRNRLRALPRALFRNLSSLESVQLDHNQLET---LPGDVFGALPRLTEVLLGHNSWRC 425
Query: 533 DCNIADMWEWATREKGDIGVLVGSTTPTEIGFGA 566
DC + W + G +G G P G GA
Sbjct: 426 DCGLGPFLGWLRQHLGLVG---GEEPPRCAGPGA 456
Score = 187 (70.9 bits), Expect = 4.2e-11, P = 4.2e-11
Identities = 93/370 (25%), Positives = 153/370 (41%)
Query: 110 NLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNL 169
NL H+ + + L+S + L L + S IS + F++ L+ L L
Sbjct: 51 NLTHILLFGMGRGVLQSQS-----FSGMTVLQRLMISDSHISAVAPGTFSDLIKLKTLRL 105
Query: 170 AENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAAD 229
+ N++ L A L +V L+ L L + L+G + ++ F L+ L L+ N L
Sbjct: 106 SRNKITHLPGA--LLDKMVLLEQLFLDHNALRG-IDQNMFQKLVNLQELALNQNQLDFLP 162
Query: 230 LSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLE 289
S+ L L L L L+ LP L+ L + N L+ + LL+ L +L
Sbjct: 163 ASLFTN-LENLKLLDLSGNNLTHLPKGLLGAQAKLERLLLHSNRLVSLDSGLLNSLGALT 221
Query: 290 HLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRL 349
L ++++ I+ F ++ +L +L LS N L L S LF + +L++L L L L
Sbjct: 222 ELQFHRNHIRSIAPGAFDRLPNLSSLTLSRNHLAFLPSALFLHSHNLTLLTLFENPLAEL 281
Query: 350 NETVFHENYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETV 409
+F E L+EL L+ L LP + + R + + L L +
Sbjct: 282 PGVLFGE---MGGLQELWLNRTQLRTLPAA----AFRNLSRLRYLGVTLSPRLSALPQGA 334
Query: 410 FHENYTYPDLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNI 469
F +L+ L L N L LP G ++ LP +F N ++
Sbjct: 335 FQG---LGELQVLALHSNGLTALPDGLLRGLGKLRQVSLRRN--RLRALPRALFRNLSSL 389
Query: 470 TSLNLANNNL 479
S+ L +N L
Sbjct: 390 ESVQLDHNQL 399
Score = 184 (69.8 bits), Expect = 9.0e-11, P = 9.0e-11
Identities = 67/232 (28%), Positives = 111/232 (47%)
Query: 66 LNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLK 125
L +L L N L ++ G+ + L +L L +R ++ I+P AFD L +L +L LS+N L
Sbjct: 196 LERLLLHSNRLVSLDSGLLNSLGALTELQFHRNHIRSIAPGAFDRLPNLSSLTLSRNHL- 254
Query: 126 SHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQ 185
+ + L L + L L L ++ ++ LP +F L+ L L +L L A +
Sbjct: 255 AFLPSALFLHS-HNLTLLTLFENPLAELPGVLFGEMGGLQELWLNRTQLRTLPAAAF--R 311
Query: 186 NLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSL 245
NL L L ++ L + AF +L+ L L N L+A + L+ L KL ++SL
Sbjct: 312 NLSRLRYLGVTLSPRLSALPQGAFQGLGELQVLALHSNGLTALPDGL-LRGLGKLRQVSL 370
Query: 246 RNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSN 297
R L LP F + L+ + + HN L + L L + +G+++
Sbjct: 371 RRNRLRALPRALFRNLSSLESVQLDHNQLETLPGDVFGALPRLTEVLLGHNS 422
Score = 129 (50.5 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 68/255 (26%), Positives = 99/255 (38%)
Query: 198 CHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLS--VALKPLTKLHRLSLRNCGLSRLPA 255
C + G L F + ++ S D++ AL T L + L G L +
Sbjct: 8 CAVLGLLRAQPFPCPPACKCVFRDAAQCSGGDVARISALGLPTNLTHILLFGMGRGVLQS 67
Query: 256 NTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTL 315
+F T LQ L IS + + S L L+ L + + + + + KM L+ L
Sbjct: 68 QSFSGMTVLQRLMISDSHISAVAPGTFSDLIKLKTLRLSRNKITHLPGALLDKMVLLEQL 127
Query: 316 ILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHV 375
L N L ++ +FQ L +L L LN L L ++F +L+ L LSGN L
Sbjct: 128 FLDHNALRGIDQNMFQKLVNLQELALNQNQLDFLPASLFTN---LENLKLLDLSGNNLTH 184
Query: 376 LPDSTKQYSMRTIPTQIWKN----FD--FLVILFILNETVFHENYT----------YPDL 419
LP + + N D L L L E FH N+ P+L
Sbjct: 185 LPKGLLGAQAKLERLLLHSNRLVSLDSGLLNSLGALTELQFHRNHIRSIAPGAFDRLPNL 244
Query: 420 EELRLSGNPLHVLPT 434
L LS N L LP+
Sbjct: 245 SSLTLSRNHLAFLPS 259
>UNIPROTKB|E1BAW2 [details] [associations]
symbol:LRRC32 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050710 "negative regulation of cytokine secretion"
evidence=IEA] [GO:0046007 "negative regulation of activated T cell
proliferation" evidence=IEA] [GO:0010628 "positive regulation of
gene expression" evidence=IEA] InterPro:IPR001611 PROSITE:PS51450
InterPro:IPR003591 SMART:SM00369 GO:GO:0010628 InterPro:IPR000372
SMART:SM00013 GO:GO:0046007 GO:GO:0050710
GeneTree:ENSGT00700000104185 CTD:2615 OMA:CCGNGWL EMBL:DAAA02041103
IPI:IPI00710724 RefSeq:NP_001180004.1 UniGene:Bt.88092
Ensembl:ENSBTAT00000001716 GeneID:615467 KEGG:bta:615467
NextBio:20899631 Uniprot:E1BAW2
Length = 662
Score = 242 (90.2 bits), Expect = 5.5e-17, P = 5.5e-17
Identities = 119/373 (31%), Positives = 170/373 (45%)
Query: 19 LITINLNANPIQP--VEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPL 76
L +++L+ N + VE A +L L + E +L+++ + F + L +LDL N L
Sbjct: 127 LTSLDLSGNSLYSGLVEQLLGEAPALRTLSLAENSLTRLGRRTFLSTPALERLDLHSNVL 186
Query: 77 RIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGN 136
IE G F+ L L +L L+R +LT IS F +L L+ L+LS N +++ T
Sbjct: 187 MDIEDGAFEALPRLVHLNLSRNSLTCISD--F-SLQQLRVLDLSCNSIEAF--QTAEPRA 241
Query: 137 LGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLG-QNLVHLDSLDL 195
+L LDLR++ + + PD + L LN A N LI L G +H S
Sbjct: 242 EYQLAWLDLRENKLLHFPD--LSALPRLIYLN-ASNNLIRLPAEPPRGGAEGLHAPSEGW 298
Query: 196 SNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSL-RNCGLSRLP 254
S+ L P + ++L L LS N + L+PLT L L+L RNC L
Sbjct: 299 SSLPLSNPSRNTSTQPLSQLLNLDLSYNEIELVPEGF-LEPLTSLRSLNLSRNC-LRAFE 356
Query: 255 ANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKT 314
A CL LDISHN L + L SL L + + L+ + TF + SL+
Sbjct: 357 AQP-GSLPCLTLLDISHNAL-ETLELGARALGSLRTLLLQDNALRDLPLYTFTSLASLQR 414
Query: 315 LILSGNKL-------ETLESGL--FQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEE 365
L L GN+L E SG F ++ L VL L + + L F + L E
Sbjct: 415 LNLQGNRLSPCGGPAEPGPSGCVAFSGISSLRVLNLADNEMEILQAGAF----LHTPLAE 470
Query: 366 LRLSGNP-LHVLP 377
L LS NP L V P
Sbjct: 471 LDLSSNPGLDVAP 483
Score = 202 (76.2 bits), Expect = 9.2e-12, Sum P(2) = 9.2e-12
Identities = 104/337 (30%), Positives = 151/337 (44%)
Query: 64 TTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNL---TYISPSAFDNLNHLKTLELS 120
T L LDLS N + ++PGVF L LE+L L +L T ++ L HL +L+LS
Sbjct: 74 TALRHLDLSANEISFLQPGVFQALPHLEHLNLAHNHLAVGTALNTGGLGPLLHLTSLDLS 133
Query: 121 QNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDL-DV 179
N L S + L LG L TL L ++ ++ L F + L L+L N L+D+ D
Sbjct: 134 GNSLYSGLVEQL-LGEAPALRTLSLAENSLTRLGRRTFLSTPALERLDLHSNVLMDIEDG 192
Query: 180 ATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTK 239
A LVHL+ LS L +S+ + +LR L LS N + A + + +
Sbjct: 193 AFEALPRLVHLN---LSRNSLTC-ISD---FSLQQLRVLDLSCNSIEAFQTAEP-RAEYQ 244
Query: 240 LHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNL- 298
L L LR L P L L+ S+N + E L G+S+L
Sbjct: 245 LAWLDLRENKLLHFP--DLSALPRLIYLNASNNLIRLPAEPPRGGAEGLHAPSEGWSSLP 302
Query: 299 -QRISRSTFLK-MTSLKTLILSGNKLETLESGLFQNLTHLSVLELN-NCGLTRLNETVFH 355
SR+T + ++ L L LS N++E + G + LT L L L+ NC R E
Sbjct: 303 LSNPSRNTSTQPLSQLLNLDLSYNEIELVPEGFLEPLTSLRSLNLSRNC--LRAFEA--- 357
Query: 356 ENYTYPDLEELRLSGNPLHVLPDSTKQY-SMRTIPTQ 391
+ + P L L +S N L L + S+RT+ Q
Sbjct: 358 QPGSLPCLTLLDISHNALETLELGARALGSLRTLLLQ 394
Score = 150 (57.9 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 120/443 (27%), Positives = 180/443 (40%)
Query: 11 RRNLDNPGLITINLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKL 69
R L P L ++L++N + +E GAF L++L + +L+ I+ F +L L L
Sbjct: 168 RTFLSTPALERLDLHSNVLMDIEDGAFEALPRLVHLNLSRNSLTCIS-DF--SLQQLRVL 224
Query: 70 DLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHID 129
DLS N + + L +L L L + P L L L S N ++ +
Sbjct: 225 DLSCNSIEAFQTAEPRAEYQLAWLDLRENKLLHF-PD-LSALPRLIYLNASNNLIRLPAE 282
Query: 130 WTLVLGNLGKLDTLDLRQSGISNLPDNVFANNT------WLRNLNLAENELIDLDVATTL 183
G + L G S+LP + + NT L NL+L+ NE I+L V
Sbjct: 283 -----PPRGGAEGLHAPSEGWSSLPLSNPSRNTSTQPLSQLLNLDLSYNE-IEL-VPEGF 335
Query: 184 GQNLVHLDSLDLS-NCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHR 242
+ L L SL+LS NC L+ ++ + L L +S N L +L + L L
Sbjct: 336 LEPLTSLRSLNLSRNC-LRAFEAQPGSLPCLTL--LDISHNALETLELGA--RALGSLRT 390
Query: 243 LSLRNCGLSRLPANTFHRFTCLQELDISHNPLID---------AFTALLSPLESLEHLDM 293
L L++ L LP TF LQ L++ N L + S + SL L++
Sbjct: 391 LLLQDNALRDLPLYTFTSLASLQRLNLQGNRLSPCGGPAEPGPSGCVAFSGISSLRVLNL 450
Query: 294 GYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLT-HLSVLELNNCGLTRLNET 352
+ ++ + FL T L L LS N + G L L VL L GL L
Sbjct: 451 ADNEMEILQAGAFLH-TPLAELDLSSNPGLDVAPGALAGLEGSLEVLALQGNGLAVLQVD 509
Query: 353 VFHENYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHE 412
+ + L+ L L+ N L LP T+ S+ + +N F ++ + E
Sbjct: 510 L----PCFSCLKRLNLAENRLSRLPAWTQAVSLEVLDL---RNNSFSLLPGSAMGGL--E 560
Query: 413 NYTYPDLEELRLSGNPLHVLPTG 435
N L L L GNPL G
Sbjct: 561 N----SLRRLYLQGNPLSCCGNG 579
Score = 150 (57.9 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 79/300 (26%), Positives = 127/300 (42%)
Query: 140 LDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCH 199
++ L+L ++ + ++ T LR+L+L+ NE+ L Q L HL+ L+L++ H
Sbjct: 52 IEVLNLSRNQLRSILALPLGFYTALRHLDLSANEISFLQPGVF--QALPHLEHLNLAHNH 109
Query: 200 LK-GP-LSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANT 257
L G L+ L +L LSGN L + + L L LSL L+RL T
Sbjct: 110 LAVGTALNTGGLGPLLHLTSLDLSGNSLYSGLVEQLLGEAPALRTLSLAENSLTRLGRRT 169
Query: 258 FHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLIL 317
F L+ LD+ N L+D L L HL++ ++L IS + L+ L L
Sbjct: 170 FLSTPALERLDLHSNVLMDIEDGAFEALPRLVHLNLSRNSLTCISD---FSLQQLRVLDL 226
Query: 318 SGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLP 377
S N +E ++ + L+ L+L L F + P L L S N + LP
Sbjct: 227 SCNSIEAFQTAEPRAEYQLAWLDLRENKLLH-----FPDLSALPRLIYLNASNNLIR-LP 280
Query: 378 DSTKQYSMRTI--PTQIWKNFDFLVILFILNETVFHENYTYPDLEELRLSGNPLHVLPTG 435
+ + P++ W + L + N + L L LS N + ++P G
Sbjct: 281 AEPPRGGAEGLHAPSEGWSS------LPLSNPSRNTSTQPLSQLLNLDLSYNEIELVPEG 334
Score = 137 (53.3 bits), Expect = 9.9e-05, Sum P(2) = 9.9e-05
Identities = 56/169 (33%), Positives = 81/169 (47%)
Query: 69 LDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHI 128
L+LS N LR I T+L +L L+ ++++ P F L HL+ L L+ N L +
Sbjct: 55 LNLSRNQLRSILALPLGFYTALRHLDLSANEISFLQPGVFQALPHLEHLNLAHNHLA--V 112
Query: 129 DWTLVLGNLGKL---DTLDLRQSGI-SNLPDNVFANNTWLRNLNLAENELIDLDVATTLG 184
L G LG L +LDL + + S L + + LR L+LAEN L L T L
Sbjct: 113 GTALNTGGLGPLLHLTSLDLSGNSLYSGLVEQLLGEAPALRTLSLAENSLTRLGRRTFLS 172
Query: 185 QNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSA-ADLSV 232
L+ LDL + L + + AF +L L LS N L+ +D S+
Sbjct: 173 TPA--LERLDLHSNVLMD-IEDGAFEALPRLVHLNLSRNSLTCISDFSL 218
Score = 39 (18.8 bits), Expect = 9.2e-12, Sum P(2) = 9.2e-12
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 458 LPPNVFNNTRNITSLNLANNNLS 480
LP F + ++ LNL N LS
Sbjct: 401 LPLYTFTSLASLQRLNLQGNRLS 423
>FB|FBgn0034540 [details] [associations]
symbol:Lrt "Leucine-rich tendon-specific protein"
species:7227 "Drosophila melanogaster" [GO:0016021 "integral to
membrane" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:2001282 "negative regulation of muscle cell chemotaxis toward
tendon cell" evidence=IMP] [GO:0005927 "muscle tendon junction"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0043234 "protein complex" evidence=IPI] [GO:2001283 "Roundabout
signaling pathway involved in muscle cell chemotaxis toward tendon
cell" evidence=IGI] InterPro:IPR001611 PROSITE:PS51450
EMBL:AE013599 GO:GO:0016021 GO:GO:0005886 GO:GO:0043234
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005927 GeneTree:ENSGT00690000101816 RefSeq:NP_611506.2
UniGene:Dm.22099 ProteinModelPortal:A1ZBX8 SMR:A1ZBX8
EnsemblMetazoa:FBtr0302284 GeneID:37342 KEGG:dme:Dmel_CG11136
UCSC:CG11136-RA CTD:37342 FlyBase:FBgn0034540 eggNOG:NOG299525
InParanoid:A1ZBX8 OMA:PIHCESK OrthoDB:EOG48KPT1 GenomeRNAi:37342
NextBio:803193 Bgee:A1ZBX8 GO:GO:2001282 GO:GO:2001283
Uniprot:A1ZBX8
Length = 808
Score = 243 (90.6 bits), Expect = 6.2e-17, P = 6.2e-17
Identities = 96/355 (27%), Positives = 167/355 (47%)
Query: 89 SLEYLMLNRCNLTYISPSA-FDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQ 147
S+ L + N+T++S + FDN++ L L +S ++K + + LG G L L L
Sbjct: 153 SISLLDCSLRNVTFLSDAKIFDNVS-LHGLVISSGEIK-RVHKSAFLGIRGPLQALGLPG 210
Query: 148 SGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSED 207
+ + ++P N + + L L+LA N++ L A +G L L L+LSN + +S+
Sbjct: 211 NALMSVPWNALSTLSALERLDLANNKIKALGTADFVG--LTSLVYLELSNNQISS-ISQR 267
Query: 208 AFVNATKLRTLYLSGNPLSAADLSVALKPLTK---LHRLSLRNCGLSR-LPANTFHRFTC 263
FVN KL L L GN L D + +L+ L++ L +L L+ L+ L T
Sbjct: 268 TFVNLRKLEVLKLGGNRLG--DYAQSLRSLSQCLSLRQLDLQANNLNGPLSEQTLPGMRN 325
Query: 264 LQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLE 323
L+ L+++ N + L+ L L + ++ + + F + +L +L LS N +
Sbjct: 326 LESLNLNRNLIKSIQNKALANFSRLVSLSLRHNQIDVLQDHAFFGLGALDSLDLSYNGIV 385
Query: 324 TLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQY 383
+ S Q+L+ L+VL+L + L L + P L ELRL+GN + ++ +
Sbjct: 386 AISSASLQHLSRLTVLDLTHNFLRALTSDLIAP---LPSLRELRLAGNDISIVARNAMDG 442
Query: 384 SMRTIPTQIWKN---FDFLVILFI--LNETVFHENYTYPDLEELRLSGNPLHVLP 433
+ Q+ +N D + F L E+ H + + + RL G PL +P
Sbjct: 443 ARELESLQMQENPLSCDCSIRPFAEWLQESQLHSSLSASCVTPPRLEGAPLLQVP 497
Score = 229 (85.7 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 105/411 (25%), Positives = 180/411 (43%)
Query: 32 VEGAFLVA---RSLLY-LYMQECTLSKI----NPQFFTNLTTLNKLDLSGNPLRIIEPGV 83
+ G L+A R+ Y + + +C+L + + + F N++ L+ L +S ++ +
Sbjct: 137 LHGMMLLADRLRTSPYSISLLDCSLRNVTFLSDAKIFDNVS-LHGLVISSGEIKRVHKSA 195
Query: 84 FDPLTS-LEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDT 142
F + L+ L L L + +A L+ L+ L+L+ NK+K+ + +G L L
Sbjct: 196 FLGIRGPLQALGLPGNALMSVPWNALSTLSALERLDLANNKIKA-LGTADFVG-LTSLVY 253
Query: 143 LDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKG 202
L+L + IS++ F N L L L N L D + + L LDL +L G
Sbjct: 254 LELSNNQISSISQRTFVNLRKLEVLKLGGNRLGDYAQSLRSLSQCLSLRQLDLQANNLNG 313
Query: 203 PLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFT 262
PLSE L +L L+ N + + + AL ++L LSLR+ + L + F
Sbjct: 314 PLSEQTLPGMRNLESLNLNRNLIKSIQ-NKALANFSRLVSLSLRHNQIDVLQDHAFFGLG 372
Query: 263 CLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKL 322
L LD+S+N ++ +A L L L LD+ ++ L+ ++ + SL+ L L+GN +
Sbjct: 373 ALDSLDLSYNGIVAISSASLQHLSRLTVLDLTHNFLRALTSDLIAPLPSLRELRLAGNDI 432
Query: 323 ETLESGLFQNLTHLSVLELN------NCGLTR----LNETVFHENYTYPDLEELRLSGNP 372
+ L L++ +C + L E+ H + + + RL G P
Sbjct: 433 SIVARNAMDGARELESLQMQENPLSCDCSIRPFAEWLQESQLHSSLSASCVTPPRLEGAP 492
Query: 373 LHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTYP--DLEE 421
L +P T M + N + + L ET+ N T P DL E
Sbjct: 493 LLQVPVETLSCDMDNVEKD---NANIMQHL----ETLAKPNQTSPIKDLSE 536
Score = 183 (69.5 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 80/288 (27%), Positives = 128/288 (44%)
Query: 9 NDRRNLDNPGLITINLNANPIQPV-EGAFLVARSLLY-LYMQECTLSKINPQFFTNLTTL 66
+D + DN L + +++ I+ V + AFL R L L + L + + L+ L
Sbjct: 168 SDAKIFDNVSLHGLVISSGEIKRVHKSAFLGIRGPLQALGLPGNALMSVPWNALSTLSAL 227
Query: 67 NKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKS 126
+LDL+ N ++ + F LTSL YL L+ ++ IS F NL L+ L+L N+L
Sbjct: 228 ERLDLANNKIKALGTADFVGLTSLVYLELSNNQISSISQRTFVNLRKLEVLKLGGNRLGD 287
Query: 127 HIDWTLVLGNLGKLDTLDLRQSGISN-LPDNVFANNTWLRNLNLAENELIDLDVATTLGQ 185
+ L L LDL+ + ++ L + L +LNL N LI +
Sbjct: 288 YAQSLRSLSQCLSLRQLDLQANNLNGPLSEQTLPGMRNLESLNLNRN-LIK-SIQNKALA 345
Query: 186 NLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSL 245
N L SL L + + L + AF L +L LS N + A S +L+ L++L L L
Sbjct: 346 NFSRLVSLSLRHNQID-VLQDHAFFGLGALDSLDLSYNGIVAIS-SASLQHLSRLTVLDL 403
Query: 246 RNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDM 293
+ L L ++ L+EL ++ N + + LE L M
Sbjct: 404 THNFLRALTSDLIAPLPSLRELRLAGNDISIVARNAMDGARELESLQM 451
Score = 138 (53.6 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 74/326 (22%), Positives = 131/326 (40%)
Query: 240 LHRLSLRNCGLSRLPANTFHRFTC-LQELDISHNPLIDAFTALLSPLESLEHLDMGYSNL 298
LH L + + + R+ + F LQ L + N L+ LS L +LE LD+ + +
Sbjct: 178 LHGLVISSGEIKRVHKSAFLGIRGPLQALGLPGNALMSVPWNALSTLSALERLDLANNKI 237
Query: 299 QRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENY 358
+ + + F+ +TSL L LS N++ ++ F NL L VL+L L +++ +
Sbjct: 238 KALGTADFVGLTSLVYLELSNNQISSISQRTFVNLRKLEVLKLGGNRLGDYAQSLRSLSQ 297
Query: 359 TYPDLEELRLSGNPLH-VLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTYP 417
L +L L N L+ L + T MR + + N + +I I N+ + N++
Sbjct: 298 CL-SLRQLDLQANNLNGPLSEQTLP-GMRNLESL---NLNRNLIKSIQNKAL--ANFSR- 349
Query: 418 DLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANN 477
L L L N + VL + I + + +T L+L +N
Sbjct: 350 -LVSLSLRHNQIDVLQ--DHAFFGLGALDSLDLSYNGIVAISSASLQHLSRLTVLDLTHN 406
Query: 478 NL-SMTSELSFQFXXXXXXXXXXXXXXXXXTHISPTVLRHNRAITSIKLVGNPWKCDCNI 536
L ++TS+L ++ + R + S+++ NP CDC+I
Sbjct: 407 FLRALTSDLIAPLPSLRELRLAGNDISI----VARNAMDGARELESLQMQENPLSCDCSI 462
Query: 537 ADMWEWATREKGDIGVLVGSTTPTEI 562
EW + + TP +
Sbjct: 463 RPFAEWLQESQLHSSLSASCVTPPRL 488
Score = 38 (18.4 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 7/15 (46%), Positives = 12/15 (80%)
Query: 291 LDMGYSNLQRISRST 305
L++G SN+ R+ RS+
Sbjct: 632 LNIGCSNITRLERSS 646
>FB|FBgn0036494 [details] [associations]
symbol:Toll-6 "Toll-6" species:7227 "Drosophila melanogaster"
[GO:0004888 "transmembrane signaling receptor activity"
evidence=ISS;NAS] [GO:0005886 "plasma membrane" evidence=NAS]
[GO:0016021 "integral to membrane" evidence=ISS] [GO:0006952
"defense response" evidence=NAS] [GO:0007165 "signal transduction"
evidence=IEA;ISS] Pfam:PF00560 InterPro:IPR000157
InterPro:IPR001611 Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450
SMART:SM00255 GO:GO:0016021 InterPro:IPR003591 SMART:SM00369
GO:GO:0045087 GO:GO:0005622 InterPro:IPR000372 SMART:SM00013
GO:GO:0004888 SUPFAM:SSF52200 HSSP:O60603 FlyBase:FBgn0036494
EMBL:AF247766 ProteinModelPortal:Q9NBK9 STRING:Q9NBK9 PRIDE:Q9NBK9
InParanoid:Q9NBK9 ArrayExpress:Q9NBK9 Bgee:Q9NBK9 Uniprot:Q9NBK9
Length = 1514
Score = 228 (85.3 bits), Expect = 6.7e-17, Sum P(2) = 6.7e-17
Identities = 113/437 (25%), Positives = 195/437 (44%)
Query: 54 KINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNH 113
+I F+ L +LDLS N + + +F L+ L L ++ L ++ F + +
Sbjct: 190 EIEADAFSVTRRLERLDLSSNNIWSLPDNIFCTLSELSALNMSENRLQDVNELGFRDRSQ 249
Query: 114 LKT------LELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNL 167
T +++ KS T +L L+ LD+ + LP N F LR L
Sbjct: 250 EPTNGSTESTSTTESAKKSSSSSTSC--SLD-LEYLDVSHNDFVVLPANGFGTLRRLRVL 306
Query: 168 NLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKL-RTLYLSGNPLS 226
++ N I + +A L +L L+LS+ + L + F K+ + +YL N +S
Sbjct: 307 SVNNNG-ISM-IADKALSGLKNLQILNLSSNKIVA-LPTELFAEQAKIIQEVYLQNNSIS 363
Query: 227 AAD--LSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSP 284
+ L L L L LS+ + + NTF L L++SHN L + S
Sbjct: 364 VLNPQLFSNLDQLQALD-LSMNQITSTWIDKNTFVGLIRLVLLNLSHNKLTKLEPEIFSD 422
Query: 285 LESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNC 344
L +L+ L++ ++ L+ I+ TF M +L TL+LS NKL+ L++ L LS+L L+N
Sbjct: 423 LYTLQILNLRHNQLENIAADTFAPMNNLHTLLLSHNKLKYLDAYALNGLYVLSLLSLDNN 482
Query: 345 GLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPT-QIWKNFDFLVILF 403
L ++ F N + L++L L+GN L +P + + +MR + T + +N ++
Sbjct: 483 ALIGVHPDAFR-NCSA--LQDLNLNGNQLKTVPLALR--NMRHLRTVDLGEN-----MIT 532
Query: 404 ILNETVFHENYTYPDLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVF 463
++ ++ F +L LRL GN L + +I + P F
Sbjct: 533 VMEDSAFKG---LGNLYGLRLIGNYLENITMHTFRDLPNLQILNLARN--RIAVVEPGAF 587
Query: 464 NNTRNITSLNLANNNLS 480
T +I ++ L N L+
Sbjct: 588 EMTSSIQAVRLDGNELN 604
Score = 225 (84.3 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 97/360 (26%), Positives = 173/360 (48%)
Query: 19 LITINLNANPIQPVEGA-FLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLR 77
L+ +NL+ N + +E F +L L ++ L I F + L+ L LS N L+
Sbjct: 402 LVLLNLSHNKLTKLEPEIFSDLYTLQILNLRHNQLENIAADTFAPMNNLHTLLLSHNKLK 461
Query: 78 IIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNL 137
++ + L L L L+ L + P AF N + L+ L L+ N+LK+ L L N+
Sbjct: 462 YLDAYALNGLYVLSLLSLDNNALIGVHPDAFRNCSALQDLNLNGNQLKTV---PLALRNM 518
Query: 138 GKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSN 197
L T+DL ++ I+ + D+ F L L L N L ++ + T ++L +L L+L+
Sbjct: 519 RHLRTVDLGENMITVMEDSAFKGLGNLYGLRLIGNYLENITMHTF--RDLPNLQILNLAR 576
Query: 198 CHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANT 257
+ + AF + ++ + L GN L+ D++ + L L++ + +RL +
Sbjct: 577 NRI-AVVEPGAFEMTSSIQAVRLDGNELN--DINGLFSNMPSLLWLNISD---NRLESFD 630
Query: 258 F-HRFTCLQELDISHNPLIDAFT--ALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKT 314
+ H + LQ LD+ N L L S L+ L+ LD+ ++ LQRI S+ S++
Sbjct: 631 YGHVPSTLQWLDLHKNRLSSLSNRFGLDSELK-LQTLDVSFNQLQRIGPSSI--PNSIEL 687
Query: 315 LILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFH--ENYTYPDLEELRLSGNP 372
L L+ N + T++ F + T+L+ ++L +T L+ + + L E + GNP
Sbjct: 688 LFLNDNLITTVDPDTFMHKTNLTRVDLYANQITTLDIKSLRILPVWEHRALPEFYIGGNP 747
Score = 222 (83.2 bits), Expect = 3.0e-16, Sum P(2) = 3.0e-16
Identities = 92/312 (29%), Positives = 144/312 (46%)
Query: 22 INLNANPIQ--PVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRI- 78
+NL++N I P E A+ + +Y+Q ++S +NPQ F+NL L LDLS N +
Sbjct: 330 LNLSSNKIVALPTELFAEQAKIIQEVYLQNNSISVLNPQLFSNLDQLQALDLSMNQITST 389
Query: 79 -IEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNL 137
I+ F L L L L+ LT + P F +L L+ L L N+L++ T N
Sbjct: 390 WIDKNTFVGLIRLVLLNLSHNKLTKLEPEIFSDLYTLQILNLRHNQLENIAADTFAPMN- 448
Query: 138 GKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSN 197
L TL L + + L D N ++ +L +N + + V +N L L+L+
Sbjct: 449 -NLHTLLLSHNKLKYL-DAYALNGLYVLSLLSLDNNAL-IGVHPDAFRNCSALQDLNLNG 505
Query: 198 CHLKG-PLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPAN 256
LK PL A N LRT+ L N ++ + S A K L L+ L L L + +
Sbjct: 506 NQLKTVPL---ALRNMRHLRTVDLGENMITVMEDS-AFKGLGNLYGLRLIGNYLENITMH 561
Query: 257 TFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLI 316
TF LQ L+++ N + S++ + + + L I+ F M SL L
Sbjct: 562 TFRDLPNLQILNLARNRIAVVEPGAFEMTSSIQAVRLDGNELNDIN-GLFSNMPSLLWLN 620
Query: 317 LSGNKLETLESG 328
+S N+LE+ + G
Sbjct: 621 ISDNRLESFDYG 632
Score = 220 (82.5 bits), Expect = 4.9e-16, Sum P(2) = 4.9e-16
Identities = 89/309 (28%), Positives = 145/309 (46%)
Query: 43 LYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTY 102
L L M + T + I+ F L L L+LS N L +EP +F L +L+ L L L
Sbjct: 379 LDLSMNQITSTWIDKNTFVGLIRLVLLNLSHNKLTKLEPEIFSDLYTLQILNLRHNQLEN 438
Query: 103 ISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNT 162
I+ F +N+L TL LS NKLK ++D L L L L L + + + + F N +
Sbjct: 439 IAADTFAPMNNLHTLLLSHNKLK-YLD-AYALNGLYVLSLLSLDNNALIGVHPDAFRNCS 496
Query: 163 WLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSG 222
L++LNL N+L + +A +N+ HL ++DL ++ + + AF L L L G
Sbjct: 497 ALQDLNLNGNQLKTVPLAL---RNMRHLRTVDLGE-NMITVMEDSAFKGLGNLYGLRLIG 552
Query: 223 NPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALL 282
N L + + L L L+L ++ + F + +Q + + N L D L
Sbjct: 553 NYLENITMHT-FRDLPNLQILNLARNRIAVVEPGAFEMTSSIQAVRLDGNELND-INGLF 610
Query: 283 SPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLES--GLFQNLTHLSVLE 340
S + SL L++ + L+ ++L+ L L N+L +L + GL L L L+
Sbjct: 611 SNMPSLLWLNISDNRLESFDYGHV--PSTLQWLDLHKNRLSSLSNRFGLDSELK-LQTLD 667
Query: 341 LNNCGLTRL 349
++ L R+
Sbjct: 668 VSFNQLQRI 676
Score = 215 (80.7 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 116/490 (23%), Positives = 202/490 (41%)
Query: 66 LNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLK 125
L LD+S N ++ F L L L +N ++ I+ A L +L+ L LS NK+
Sbjct: 279 LEYLDVSHNDFVVLPANGFGTLRRLRVLSVNNNGISMIADKALSGLKNLQILNLSSNKIV 338
Query: 126 SHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELID--LDVATTL 183
+ + L + + L+ + IS L +F+N L+ L+L+ N++ +D T +
Sbjct: 339 A-LPTELFAEQAKIIQEVYLQNNSISVLNPQLFSNLDQLQALDLSMNQITSTWIDKNTFV 397
Query: 184 GQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLS--AADLSVALKPLTKLH 241
G L+ L L+LS+ L L + F + L+ L L N L AAD P+ LH
Sbjct: 398 G--LIRLVLLNLSHNKLT-KLEPEIFSDLYTLQILNLRHNQLENIAAD---TFAPMNNLH 451
Query: 242 RLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRI 301
L L + L L A + L L + +N LI +L+ L++ + L+ +
Sbjct: 452 TLLLSHNKLKYLDAYALNGLYVLSLLSLDNNALIGVHPDAFRNCSALQDLNLNGNQLKTV 511
Query: 302 SRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYP 361
+ M L+T+ L N + +E F+ L +L L L L + F + P
Sbjct: 512 PLA-LRNMRHLRTVDLGENMITVMEDSAFKGLGNLYGLRLIGNYLENITMHTFRD---LP 567
Query: 362 DLEELRLSGNPLHVL-PDSTKQYS-MRTIPTQ---------IWKNFDFLVILFILNETVF 410
+L+ L L+ N + V+ P + + S ++ + ++ N L+ L I + +
Sbjct: 568 NLQILNLARNRIAVVEPGAFEMTSSIQAVRLDGNELNDINGLFSNMPSLLWLNISDNRLE 627
Query: 411 HENYTY-PD-LEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRN 468
+Y + P L+ L L N L L + ++ + P+ N+
Sbjct: 628 SFDYGHVPSTLQWLDLHKNRLSSL-SNRFGLDSELKLQTLDVSFNQLQRIGPSSIPNSIE 686
Query: 469 ITSLNLANNNLSMTSELSFQFXXXXXXXXXXXXXXXXXTHISPTVLR--HNRAITSIKLV 526
+ LN +N ++ +F S +L +RA+ +
Sbjct: 687 LLFLN--DNLITTVDPDTFMHKTNLTRVDLYANQITTLDIKSLRILPVWEHRALPEFYIG 744
Query: 527 GNPWKCDCNI 536
GNP+ CDCNI
Sbjct: 745 GNPFTCDCNI 754
Score = 182 (69.1 bits), Expect = 6.1e-12, Sum P(2) = 6.1e-12
Identities = 75/311 (24%), Positives = 135/311 (43%)
Query: 79 IEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLEL-SQNKLKSHIDWTLVLGNL 137
+E F L L+ L + C L + D L L+ L L + N L +++ +
Sbjct: 137 LEAQSFAHLVRLQQLSIQYCKLGRLGRQVLDGLEQLRNLTLRTHNILWPALNFEIEADAF 196
Query: 138 G---KLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVA--TTLGQNLVHLDS 192
+L+ LDL + I +LPDN+F + L LN++EN L D++ Q + +
Sbjct: 197 SVTRRLERLDLSSNNIWSLPDNIFCTLSELSALNMSENRLQDVNELGFRDRSQEPTNGST 256
Query: 193 LDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSR 252
S S + + L L +S N + L +L LS+ N G+S
Sbjct: 257 ESTSTTESAKKSSSSSTSCSLDLEYLDVSHNDFVVLPAN-GFGTLRRLRVLSVNNNGISM 315
Query: 253 LPANTFHRFTCLQELDISHNPLIDAFTALLSP-LESLEHLDMGYSNLQRISRSTFLKMTS 311
+ LQ L++S N ++ T L + + ++ + + +++ ++ F +
Sbjct: 316 IADKALSGLKNLQILNLSSNKIVALPTELFAEQAKIIQEVYLQNNSISVLNPQLFSNLDQ 375
Query: 312 LKTLILSGNKLET--LESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLS 369
L+ L LS N++ + ++ F L L +L L++ LT+L +F + YT L+ L L
Sbjct: 376 LQALDLSMNQITSTWIDKNTFVGLIRLVLLNLSHNKLTKLEPEIFSDLYT---LQILNLR 432
Query: 370 GNPLHVLPDST 380
N L + T
Sbjct: 433 HNQLENIAADT 443
Score = 151 (58.2 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 89/359 (24%), Positives = 151/359 (42%)
Query: 42 LLYLYMQECTLSKINPQFFTNLTTLNKLDLSGN----P-LRI-IEPGVFDPLTSLEYLML 95
L L +Q C L ++ Q L L L L + P L IE F LE L L
Sbjct: 148 LQQLSIQYCKLGRLGRQVLDGLEQLRNLTLRTHNILWPALNFEIEADAFSVTRRLERLDL 207
Query: 96 NRCNLTYISPSAFDNLNHLKTLELSQNKLKS-----HIDWTLVLGNLGKLDTLDLRQSGI 150
+ N+ + + F L+ L L +S+N+L+ D + N G ++ +S
Sbjct: 208 SSNNIWSLPDNIFCTLSELSALNMSENRLQDVNELGFRDRSQEPTN-GSTESTSTTESAK 266
Query: 151 SNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFV 210
+ + + L L+++ N+ + L A G L L L ++N + +++ A
Sbjct: 267 KSSSSSTSCSLD-LEYLDVSHNDFVVLP-ANGFG-TLRRLRVLSVNNNGIS-MIADKALS 322
Query: 211 NATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDIS 270
L+ L LS N + A + + + + L+N +S L F LQ LD+S
Sbjct: 323 GLKNLQILNLSSNKIVALPTELFAEQAKIIQEVYLQNNSISVLNPQLFSNLDQLQALDLS 382
Query: 271 HNPL----IDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLE 326
N + ID T + L L L++ ++ L ++ F + +L+ L L N+LE +
Sbjct: 383 MNQITSTWIDKNTFV--GLIRLVLLNLSHNKLTKLEPEIFSDLYTLQILNLRHNQLENIA 440
Query: 327 SGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPL-HVLPDSTKQYS 384
+ F + +L L L++ L L+ + Y L L L N L V PD+ + S
Sbjct: 441 ADTFAPMNNLHTLLLSHNKLKYLDAYALNGLYV---LSLLSLDNNALIGVHPDAFRNCS 496
Score = 130 (50.8 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 108/483 (22%), Positives = 188/483 (38%)
Query: 22 INLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEP 81
+NLN N ++ V A R L + + E ++ + F L L L L GN L I
Sbjct: 501 LNLNGNQLKTVPLALRNMRHLRTVDLGENMITVMEDSAFKGLGNLYGLRLIGNYLENITM 560
Query: 82 GVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLD 141
F L +L+ L L R + + P AF+ + ++ + L N+L D + N+ L
Sbjct: 561 HTFRDLPNLQILNLARNRIAVVEPGAFEMTSSIQAVRLDGNELN---DINGLFSNMPSLL 617
Query: 142 TLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLK 201
L++ + + + D +T L+ L+L +N L L L L L +LD+S L+
Sbjct: 618 WLNISDNRLESF-DYGHVPST-LQWLDLHKNRLSSLSNRFGLDSEL-KLQTLDVSFNQLQ 674
Query: 202 GPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFH-- 259
+ + N+ +L L+L+ N ++ D + T L R+ L ++ L +
Sbjct: 675 R-IGPSSIPNSIEL--LFLNDNLITTVDPDTFMHK-TNLTRVDLYANQITTLDIKSLRIL 730
Query: 260 ---RFTCLQELDISHNPLIDAFTALLSPLESLEHL-DMGYSNLQRISRSTFLKMTSLKT- 314
L E I NP + L+ + H+ Y + + + + K+ + +
Sbjct: 731 PVWEHRALPEFYIGGNPF--TCDCNIDWLQKINHITSRQYPRIMDLE-TIYCKLLNNRER 787
Query: 315 ----LILSGNK--LETLESGLFQNLTHLSVLELNNCGLT-RLNETVFHENYTYPDLEELR 367
LI + K L T ++ F + H + +C +T N T FH+ ++ E
Sbjct: 788 AYIPLIEAEPKHFLCTYKTHCFA-VCHCCEFDACDCEMTCPTNCTCFHDQTWSTNIVECS 846
Query: 368 ---LSGNPLHVLPDSTKQY----SMRTIPTQIWKNFDFLVILFILNETVFH-ENYTYPDL 419
S P V D+++ Y + + + L +L+ N V H N T+ L
Sbjct: 847 GAAYSEMPRRVPMDTSELYIDGNNFVELAGHSFLGRKNLAVLYANNSNVAHIYNTTFSGL 906
Query: 420 EEL---RLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLAN 476
+ L L N H++ KI + F R + L L
Sbjct: 907 KRLLILHLEDN--HIISLEGNEFHNLENLRELYLQSNKIASIANGSFQMLRKLEVLRLDG 964
Query: 477 NNL 479
N L
Sbjct: 965 NRL 967
Score = 71 (30.1 bits), Expect = 6.7e-17, Sum P(2) = 6.7e-17
Identities = 20/77 (25%), Positives = 28/77 (36%)
Query: 458 LPPNVFNNTRNITSLNLANNNLSMTSELSFQFXXXXXXXXXXXXXXXXXTHISPTVLRHN 517
L N F+N N+ L L +N ++ + SFQ H L N
Sbjct: 922 LEGNEFHNLENLRELYLQSNKIASIANGSFQMLRKLEVLRLDGNRLM---HFEVWQLSAN 978
Query: 518 RAITSIKLVGNPWKCDC 534
+ I L N W C+C
Sbjct: 979 PYLVEISLADNQWSCEC 995
>ZFIN|ZDB-GENE-090630-1 [details] [associations]
symbol:lrrc32 "leucine rich repeat containing 32"
species:7955 "Danio rerio" [GO:0030168 "platelet activation"
evidence=IMP] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
ZFIN:ZDB-GENE-090630-1 GO:GO:0030168 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00700000104185 EMBL:CU469093 IPI:IPI00627758
RefSeq:XP_001920576.2 Ensembl:ENSDART00000059478 GeneID:100148867
KEGG:dre:100148867 NextBio:20792493 Uniprot:E7FFN8
Length = 659
Score = 241 (89.9 bits), Expect = 7.1e-17, P = 7.1e-17
Identities = 97/333 (29%), Positives = 160/333 (48%)
Query: 59 FFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLE 118
F ++ L L L GN + I F+ +L+ + L+ + I AF+ L L L+
Sbjct: 144 FLSDAPALTNLSLDGNSITKISRTTFNGSQALQNIDLHNNVIIEIEEGAFEFLTELSELD 203
Query: 119 LSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLD 178
LS N + D+ LV +L TL+L ++ ++N + L++L+L EN+L+
Sbjct: 204 LSVNSISCITDFNLV-----QLRTLNLSRNSLTNFQSLDMEDEFQLQHLDLRENKLLYFP 258
Query: 179 VATTLGQNLVHLD-SLDL-SNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVAL-- 234
V + L++LD S +L + + GPL E L +L SG L+A D + L
Sbjct: 259 VLPQRNR-LMYLDLSRNLLRSVNCSGPLEE--------LESLRESGYLLTAHDKPLTLCA 309
Query: 235 ----KPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEH 290
+ L +L L L L L ++ F L+ L+IS+N L +F+ + L SL+
Sbjct: 310 NERQQELGRLLYLDLSFNQLKTLSSSFFSSMAALESLNISNNCL-QSFS--VDSLRSLKT 366
Query: 291 LDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNN-----CG 345
LD+ ++NLQ +S S + +L+ L+L GN L L++ +F +L + L L C
Sbjct: 367 LDLSFNNLQNLSFSGGA-LPALEVLLLQGNALHLLDAHIFSSLPSIRSLHLQQNLLSICA 425
Query: 346 LTRLNETVFHENYTYPDLEELRLSGNPLHVLPD 378
+++ H + P L L LS N L +PD
Sbjct: 426 DPQISSGCVHLS-DIPSLTYLYLSENSLSSIPD 457
Score = 186 (70.5 bits), Expect = 7.1e-11, P = 7.1e-11
Identities = 93/333 (27%), Positives = 156/333 (46%)
Query: 64 TTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNK 123
+++ LDLS N L+ + +SL L L+ + ++ P F +L HL+ L+LS N
Sbjct: 50 SSIRLLDLSQNLLQNLTLQDLPSRSSLRRLDLHHNQIQFLQPGLFRDLLHLEDLDLSGNA 109
Query: 124 LKSHIDWTLVLGNLGKLDTLDLRQSGI-SNLPDNVFANNTWLRNLNLAENELIDLDVATT 182
L + LG L L LDL +G+ +++ D ++ L NL+L N + + T
Sbjct: 110 LDLYAALHTPLGPLPALRRLDLSGNGLFTDMSDYFLSDAPALTNLSLDGNSITKISRTTF 169
Query: 183 LGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSA-ADLSVALKPLTKLH 241
G L ++DL N ++ + E AF T+L L LS N +S D + L +L
Sbjct: 170 NGSQA--LQNIDLHN-NVIIEIEEGAFEFLTELSELDLSVNSISCITDFN-----LVQLR 221
Query: 242 RLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRI 301
L+L L+ + LQ LD+ N L+ + +L L +LD+ + L+ +
Sbjct: 222 TLNLSRNSLTNFQSLDMEDEFQLQHLDLRENKLL--YFPVLPQRNRLMYLDLSRNLLRSV 279
Query: 302 SRSTFLK-MTSLKT---LILSGNKLETL-ESGLFQNLTHLSVLELNNCGLTRLNETVFHE 356
+ S L+ + SL+ L+ + +K TL + Q L L L+L+ L L+ + F
Sbjct: 280 NCSGPLEELESLRESGYLLTAHDKPLTLCANERQQELGRLLYLDLSFNQLKTLSSSFFS- 338
Query: 357 NYTYPDLEELRLSGNPLHVLP-DSTKQYSMRTI 388
+ LE L +S N L DS + S++T+
Sbjct: 339 --SMAALESLNISNNCLQSFSVDSLR--SLKTL 367
Score = 169 (64.5 bits), Expect = 5.0e-09, P = 5.0e-09
Identities = 94/322 (29%), Positives = 136/322 (42%)
Query: 63 LTTLNKLDLSGNPLRIIEPGVF-DPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQ 121
L L +LDLSGN L F +L L L+ ++T IS + F+ L+ ++L
Sbjct: 123 LPALRRLDLSGNGLFTDMSDYFLSDAPALTNLSLDGNSITKISRTTFNGSQALQNIDLHN 182
Query: 122 NKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVAT 181
N + + L +L LDL + IS + D F N LR LNL+ N L +
Sbjct: 183 NVIIEIEEGAFEF--LTELSELDLSVNSISCITD--F-NLVQLRTLNLSRNSLTNFQSLD 237
Query: 182 TLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLH 241
++ L LDL L L +L L LS N L + + S L+ L L
Sbjct: 238 M--EDEFQLQHLDLRENKL---LYFPVLPQRNRLMYLDLSRNLLRSVNCSGPLEELESLR 292
Query: 242 R----LSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSN 297
L+ + L+ L LD+S N L ++ S + +LE L++ +
Sbjct: 293 ESGYLLTAHDKPLTLCANERQQELGRLLYLDLSFNQLKTLSSSFFSSMAALESLNISNNC 352
Query: 298 LQRISRSTFLKMTSLKTLILSGNKLETLE-SGLFQNLTHLSVLELNNCGLTRLNETVFHE 356
LQ S + + SLKTL LS N L+ L SG L L VL L L L+ +F
Sbjct: 353 LQSFSVDS---LRSLKTLDLSFNNLQNLSFSG--GALPALEVLLLQGNALHLLDAHIFS- 406
Query: 357 NYTYPDLEELRLSGNPLHVLPD 378
+ P + L L N L + D
Sbjct: 407 --SLPSIRSLHLQQNLLSICAD 426
Score = 161 (61.7 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 93/329 (28%), Positives = 151/329 (45%)
Query: 17 PGLITINLNANPI-QPVEGAFLV-ARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGN 74
P L ++L+ N + + FL A +L L + +++KI+ F L +DL N
Sbjct: 124 PALRRLDLSGNGLFTDMSDYFLSDAPALTNLSLDGNSITKISRTTFNGSQALQNIDLHNN 183
Query: 75 PLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVL 134
+ IE G F+ LT L L L+ +++ I+ F NL L+TL LS+N L + +L +
Sbjct: 184 VIIEIEEGAFEFLTELSELDLSVNSISCITD--F-NLVQLRTLNLSRNSLTNF--QSLDM 238
Query: 135 GNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHL-DSL 193
+ +L LDLR++ + P V L L+L+ N L ++ + L + L L +S
Sbjct: 239 EDEFQLQHLDLRENKLLYFP--VLPQRNRLMYLDLSRNLLRSVNCSGPL-EELESLRESG 295
Query: 194 DLSNCHLKGPLSEDAFVNATKL-RTLYL--SGNPLSAADLSVALKPLTKLHRLSLRNCGL 250
L H K PL+ A +L R LYL S N L S + L L++ N L
Sbjct: 296 YLLTAHDK-PLTLCANERQQELGRLLYLDLSFNQLKTLSSSF-FSSMAALESLNISNNCL 353
Query: 251 SRLPANTFHRFTCLQELDISHNPLID-AFTALLSPLESLEHLDMGYSNLQRISRSTFLKM 309
++ L+ LD+S N L + +F+ L +LE L + + L + F +
Sbjct: 354 QSFSVDSLRS---LKTLDLSFNNLQNLSFSG--GALPALEVLLLQGNALHLLDAHIFSSL 408
Query: 310 TSLKTLILSGNKLETL-ESGLFQNLTHLS 337
S+++L L N L + + HLS
Sbjct: 409 PSIRSLHLQQNLLSICADPQISSGCVHLS 437
Score = 152 (58.6 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 110/378 (29%), Positives = 168/378 (44%)
Query: 15 DNPGLITINLNANPIQPVEGA-FLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSG 73
D P L ++L+ N I + F +++L + + + +I F LT L++LDLS
Sbjct: 147 DAPALTNLSLDGNSITKISRTTFNGSQALQNIDLHNNVIIEIEEGAFEFLTELSELDLSV 206
Query: 74 NPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLV 133
N + I F+ L L L L+R +LT ++ L+ L+L +NKL + V
Sbjct: 207 NSISCITD--FN-LVQLRTLNLSRNSLTNFQSLDMEDEFQLQHLDLRENKLL----YFPV 259
Query: 134 LGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTL-----GQNLV 188
L +L LDL ++ + ++ N L +L + L D TL Q L
Sbjct: 260 LPQRNRLMYLDLSRNLLRSV--NCSGPLEELESLRESGYLLTAHDKPLTLCANERQQELG 317
Query: 189 HLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNC 248
L LDLS LK LS F + L +L +S N L + + +L+ L L LS N
Sbjct: 318 RLLYLDLSFNQLK-TLSSSFFSSMAALESLNISNNCLQSFSVD-SLRSLKTLD-LSFNN- 373
Query: 249 GLSRLPANTFHRFTCLQELDISHNPL--IDA--FTALLSPLESLEHLDMGYSNL----QR 300
L L + L+ L + N L +DA F++L S + SL HL ++ Q
Sbjct: 374 -LQNLSFSG-GALPALEVLLLQGNALHLLDAHIFSSLPS-IRSL-HLQQNLLSICADPQI 429
Query: 301 ISRSTFLK-MTSLKTLILSGNKLETLESGLFQNLTHLSVLELN-NCGLTRLNETVFHENY 358
S L + SL L LS N L ++ G F+ + L +L+L+ N G+ + T +
Sbjct: 430 SSGCVHLSDIPSLTYLYLSENSLSSIPDGAFKG-SPLLILDLSLNPGV---DITAASLSG 485
Query: 359 TYPDLEELRLSGNPLHVL 376
L L L GN LH L
Sbjct: 486 VETSLTHLSLRGNQLHSL 503
Score = 148 (57.2 bits), Expect = 9.7e-07, P = 9.7e-07
Identities = 100/373 (26%), Positives = 165/373 (44%)
Query: 19 LITINLNANPIQPVEGAFLVAR-SLLYLYMQECTLSKINPQFFTNLTTLNKL---DLSGN 74
L T+NL+ N + + + L +L ++E +K+ +F L N+L DLS N
Sbjct: 220 LRTLNLSRNSLTNFQSLDMEDEFQLQHLDLRE---NKL--LYFPVLPQRNRLMYLDLSRN 274
Query: 75 PLRIIE-PGVFDPLTSLE---YLMLNRCN-LTYISPSAFDNLNHLKTLELSQNKLKSHID 129
LR + G + L SL YL+ LT + L L L+LS N+LK+
Sbjct: 275 LLRSVNCSGPLEELESLRESGYLLTAHDKPLTLCANERQQELGRLLYLDLSFNQLKTLS- 333
Query: 130 WTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVH 189
+ ++ L++L++ + + + + + L+ L+L+ N L +L + G L
Sbjct: 334 -SSFFSSMAALESLNISNNCLQSFSVDSLRS---LKTLDLSFNNLQNLSFS---GGALPA 386
Query: 190 LDSLDLSN--CHLKGPLSEDAFVNATKLRTLYLSGNPLS-AADLSVA-----LKPLTKLH 241
L+ L L HL L F + +R+L+L N LS AD ++ L + L
Sbjct: 387 LEVLLLQGNALHL---LDAHIFSSLPSIRSLHLQQNLLSICADPQISSGCVHLSDIPSLT 443
Query: 242 RLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLE-SLEHLDMGYSNLQR 300
L L LS +P F + + L LD+S NP +D A LS +E SL HL + + L
Sbjct: 444 YLYLSENSLSSIPDGAF-KGSPLLILDLSLNPGVDITAASLSGVETSLTHLSLRGNQLHS 502
Query: 301 ISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTY 360
+S F L++L +S N+L + + + + +L L N + L +
Sbjct: 503 LSID-FRVFQKLRSLDVSVNRLSGVSP--WSEDSSVEILNLQNNRVEALGSALLQGR--- 556
Query: 361 PDLEELRLSGNPL 373
L L + NPL
Sbjct: 557 --LRTLYVGWNPL 567
>ZFIN|ZDB-GENE-040912-136 [details] [associations]
symbol:lingo1b "leucine rich repeat and Ig domain
containing 1b" species:7955 "Danio rerio" [GO:0005515 "protein
binding" evidence=IPI] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR007110 PROSITE:PS50835
ZFIN:ZDB-GENE-040912-136 GO:GO:0016021 GO:GO:0005886
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR003591 SMART:SM00369 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
MEROPS:I43.001 EMBL:CU468744 EMBL:BX470207 EMBL:BC081651
IPI:IPI00483520 RefSeq:NP_001004576.1 UniGene:Dr.12903 HSSP:P21793
ProteinModelPortal:Q66HV9 SMR:Q66HV9 IntAct:Q66HV9 STRING:Q66HV9
Ensembl:ENSDART00000052113 GeneID:447837 KEGG:dre:447837 CTD:447837
eggNOG:NOG278536 GeneTree:ENSGT00690000101682 HOGENOM:HOG000246971
InParanoid:Q66HV9 OMA:NISTIEA OrthoDB:EOG40S0F8 NextBio:20832358
Bgee:Q66HV9 Uniprot:Q66HV9
Length = 622
Score = 240 (89.5 bits), Expect = 8.1e-17, P = 8.1e-17
Identities = 92/307 (29%), Positives = 142/307 (46%)
Query: 69 LDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHI 128
LDLS N L+ I P F LE L LN ++ I P AF NL L+TL L N LK I
Sbjct: 78 LDLSKNRLKAINPEEFLNYPQLEDLQLNENIISVIEPGAFSNLLGLRTLGLRNNNLKL-I 136
Query: 129 DWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLV 188
+ G L L LD+ ++ I L D +F L+ L + +N+L+ + G L
Sbjct: 137 QLGVFTG-LSNLTRLDISENKIVILLDYMFQELYNLKELEVGDNDLVFISHRAFHG--LS 193
Query: 189 HLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSG-NPLSAADLSVALKPLTKLHRLSLRN 247
L+ L + C+L +E AF + L TL L N D S + L +L L + N
Sbjct: 194 SLEQLTMERCNLTSVPTE-AFSHLHNLLTLKLRHLNVNVIRDFS--FRRLYRLKILEIAN 250
Query: 248 CGL-SRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTF 306
L L A + H + L I++ L + L L ++ ++ ++ + +
Sbjct: 251 WPLLESLTAKSLHGLN-ITTLSITNCNLTAVPYVAIQHLVYLRFFNLSFNPIEVVEGNKM 309
Query: 307 LKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEEL 366
+ L+ L G +L ++E F+ L +L VL +++ L+ L E+ FH + +LE L
Sbjct: 310 HNLLRLQAFHLVGGRLVSIEPYSFKGLNYLRVLNVSSNSLSTLEESAFH---SVGNLETL 366
Query: 367 RLSGNPL 373
L NPL
Sbjct: 367 ALHDNPL 373
Score = 226 (84.6 bits), Expect = 2.8e-15, P = 2.8e-15
Identities = 80/293 (27%), Positives = 132/293 (45%)
Query: 52 LSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNL 111
L INP+ F N L L L+ N + +IEPG F L L L L NL I F L
Sbjct: 85 LKAINPEEFLNYPQLEDLQLNENIISVIEPGAFSNLLGLRTLGLRNNNLKLIQLGVFTGL 144
Query: 112 NHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAE 171
++L L++S+NK+ +D+ + L L L++ + + + F + L L +
Sbjct: 145 SNLTRLDISENKIVILLDY--MFQELYNLKELEVGDNDLVFISHRAFHGLSSLEQLTMER 202
Query: 172 NELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSED-AFVNATKLRTLYLSGNPLSAADL 230
L V T +L +L +L L HL + D +F +L+ L ++ PL +
Sbjct: 203 CNLTS--VPTEAFSHLHNLLTLKLR--HLNVNVIRDFSFRRLYRLKILEIANWPLLESLT 258
Query: 231 SVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEH 290
+ +L L + LS+ NC L+ +P L+ ++S NP+ + L L+
Sbjct: 259 AKSLHGLN-ITTLSITNCNLTAVPYVAIQHLVYLRFFNLSFNPIEVVEGNKMHNLLRLQA 317
Query: 291 LDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNN 343
+ L I +F + L+ L +S N L TLE F ++ +L L L++
Sbjct: 318 FHLVGGRLVSIEPYSFKGLNYLRVLNVSSNSLSTLEESAFHSVGNLETLALHD 370
Score = 193 (73.0 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 86/321 (26%), Positives = 143/321 (44%)
Query: 3 QGHPVYNDRRNLDNPGLITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTN 62
+G P+ D R LD L L A I P E FL L L + E +S I P F+N
Sbjct: 69 EGIPI--DTRLLD---LSKNRLKA--INPEE--FLNYPQLEDLQLNENIISVIEPGAFSN 119
Query: 63 LTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQN 122
L L L L N L++I+ GVF L++L L ++ + + F L +LK LE+ N
Sbjct: 120 LLGLRTLGLRNNNLKLIQLGVFTGLSNLTRLDISENKIVILLDYMFQELYNLKELEVGDN 179
Query: 123 KLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATT 182
L I G L L+ L + + ++++P F++ L NL + ++++V
Sbjct: 180 DLV-FISHRAFHG-LSSLEQLTMERCNLTSVPTEAFSH---LHNLLTLKLRHLNVNVIRD 234
Query: 183 LG-QNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLH 241
+ L L L+++N L L+ + ++ + TL ++ L+A VA++ L L
Sbjct: 235 FSFRRLYRLKILEIANWPLLESLTAKS-LHGLNITTLSITNCNLTAVPY-VAIQHLVYLR 292
Query: 242 RLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRI 301
+L + + N H LQ + L+ L L L++ ++L +
Sbjct: 293 FFNLSFNPIEVVEGNKMHNLLRLQAFHLVGGRLVSIEPYSFKGLNYLRVLNVSSNSLSTL 352
Query: 302 SRSTFLKMTSLKTLILSGNKL 322
S F + +L+TL L N L
Sbjct: 353 EESAFHSVGNLETLALHDNPL 373
Score = 176 (67.0 bits), Expect = 8.0e-10, P = 8.0e-10
Identities = 76/296 (25%), Positives = 128/296 (43%)
Query: 193 LDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSR 252
LDLS LK ++ + F+N +L L L+ N +S + A L L L LRN L
Sbjct: 78 LDLSKNRLKA-INPEEFLNYPQLEDLQLNENIISVIEPG-AFSNLLGLRTLGLRNNNLKL 135
Query: 253 LPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSL 312
+ F + L LDIS N ++ + L +L+ L++G ++L IS F ++SL
Sbjct: 136 IQLGVFTGLSNLTRLDISENKIVILLDYMFQELYNLKELEVGDNDLVFISHRAFHGLSSL 195
Query: 313 KTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNP 372
+ L + L ++ + F +L +L L+L + + + + F Y L+ L ++ P
Sbjct: 196 EQLTMERCNLTSVPTEAFSHLHNLLTLKLRHLNVNVIRDFSFRRLYR---LKILEIANWP 252
Query: 373 LHVLPDST-KQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTYPDLEELRLSGNPLHV 431
L L T K I T N + + ++ + H Y L LS NP+ V
Sbjct: 253 L--LESLTAKSLHGLNITTLSITNCNLTAVPYV---AIQHLVY----LRFFNLSFNPIEV 303
Query: 432 LPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSF 487
+ GN ++ + P F + LN+++N+LS E +F
Sbjct: 304 VE-GNKMHNLLRLQAFHLVGG-RLVSIEPYSFKGLNYLRVLNVSSNSLSTLEESAF 357
>UNIPROTKB|F1LS74 [details] [associations]
symbol:Slit1 "Slit homolog 1 protein" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
RGD:69307 GO:GO:0005737 GO:GO:0005615 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0008045
PROSITE:PS01186 InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274
SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 GO:GO:0048846 Pfam:PF12661 GO:GO:0033563 Pfam:PF01463
GeneTree:ENSGT00700000104083 GO:GO:0022028 GO:GO:0050919
IPI:IPI00389760 Ensembl:ENSRNOT00000034758 ArrayExpress:F1LS74
Uniprot:F1LS74
Length = 1417
Score = 231 (86.4 bits), Expect = 8.9e-17, Sum P(2) = 8.9e-17
Identities = 91/341 (26%), Positives = 151/341 (44%)
Query: 17 PGLIT-INLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGN 74
P +T I L N I+ + GAF R L + + +++I P F L +LN L L GN
Sbjct: 194 PETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGN 253
Query: 75 PLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVL 134
+ + GVF L +L+ L+LN + I P AF +L +L L L NK++S T
Sbjct: 254 KITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFT- 312
Query: 135 GNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLD 194
+L + TL L Q+ P N WL + L N + + L +
Sbjct: 313 -SLRAIQTLHLAQN-----PFICDCNLKWLADF-LRTNPIETTGARCASPRRLANKRIGQ 365
Query: 195 LSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLP 254
+ + + E F+ T+ +L N +D++ K + + LS++P
Sbjct: 366 IKSKKFRCSAKEQYFIPGTE--DYHL--NSECTSDVACPHKCRCEASVVECSGLKLSKIP 421
Query: 255 ANTFHRFTCLQELDISHNPL-IDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLK 313
T EL +++N + I T L L L+ +++ + + I TF TS+
Sbjct: 422 ERIPQSTT---ELRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGATSVS 478
Query: 314 TLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVF 354
L L+ N+LE++ SG+F+ L L L L N ++ ++ F
Sbjct: 479 ELHLTANQLESVRSGMFRGLDGLRTLMLRNNRISCIHNDSF 519
Score = 192 (72.6 bits), Expect = 6.0e-15, Sum P(2) = 6.0e-15
Identities = 83/325 (25%), Positives = 136/325 (41%)
Query: 24 LNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPG 82
LN N +Q + E F ++L L + E +L + + F T L L L N + IE G
Sbjct: 2 LNRNQLQVLPELLFQNNQALSRLDLSENSLQAVPRKAFRGATDLKNLQLDKNQISCIEEG 61
Query: 83 VFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKL--KSHIDWTLVLGNLGKL 140
F L LE L LN N+T I S+F+++ L+T L N L H+ W L +
Sbjct: 62 AFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQW--LRQR 119
Query: 141 DTLDL--RQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLD--LS 196
T+ L + SG ++L A + E + T + + S +
Sbjct: 120 PTIGLFTQCSGPASLRGLNVAEVQKSEFSCSGQGEAAQVPACTLSSGSCPAMCSCSNGIV 179
Query: 197 NCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPAN 256
+C KG + A + T + + L N + + A P KL R+ L N ++ + +
Sbjct: 180 DCRGKGLTAIPANLPET-MTEIRLELNGIKSIPPG-AFSPYRKLRRIDLSNNQIAEIAPD 237
Query: 257 TFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLI 316
F L L + N + D + L +L+ L + + + I F + +L L
Sbjct: 238 AFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLS 297
Query: 317 LSGNKLETLESGLFQNLTHLSVLEL 341
L NK+++L G F +L + L L
Sbjct: 298 LYDNKIQSLAKGTFTSLRAIQTLHL 322
Score = 172 (65.6 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 78/337 (23%), Positives = 138/337 (40%)
Query: 22 INLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIE 80
I+L+ N I + AF RSL L + ++ + F L TL L L+ N + I
Sbjct: 224 IDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLNANKINCIR 283
Query: 81 PGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKL--KSHIDWTLVLGNLG 138
P F L +L L L + ++ F +L ++TL L+QN ++ W
Sbjct: 284 PDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRTN 343
Query: 139 KLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDS---LDL 195
++T R + L N + + E + G HL+S D+
Sbjct: 344 PIETTGARCASPRRLA-NKRIGQIKSKKFRCSAKEQYFIP-----GTEDYHLNSECTSDV 397
Query: 196 S---NCHLKGPLSEDAFVNATKL--------RTLYLSGNPLSAADLSVALKPLTKLHRLS 244
+ C + + E + + +K+ L L+ N +S + + K L+ L +++
Sbjct: 398 ACPHKCRCEASVVECSGLKLSKIPERIPQSTTELRLNNNEISILEATGLFKKLSHLKKIN 457
Query: 245 LRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRS 304
L N +S + TF T + EL ++ N L + + L+ L L + + + I
Sbjct: 458 LSNNKVSEIEDGTFEGATSVSELHLTANQLESVRSGMFRGLDGLRTLMLRNNRISCIHND 517
Query: 305 TFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLEL 341
+F + +++ L L N + T+ G F L LS L L
Sbjct: 518 SFTGLRNVRLLSLYDNHITTISPGAFDTLQALSTLNL 554
Score = 161 (61.7 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 96/374 (25%), Positives = 154/374 (41%)
Query: 22 INLNANPIQPVE--GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRII 79
+ LN N I +E G F L + + +S+I F T++++L L+ N L +
Sbjct: 431 LRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGATSVSELHLTANQLESV 490
Query: 80 EPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLG---N 136
G+F L L LML ++ I +F L +++ L L N HI T+ G
Sbjct: 491 RSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDN----HIT-TISPGAFDT 545
Query: 137 LGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLS 196
L L TL+L ++N P N WL + L + +++ QN L + L
Sbjct: 546 LQALSTLNL----LAN-PFNCNCQLAWLGDW-LRKRKIV---TGNPRCQNPDFLRQIPLQ 596
Query: 197 NCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSL-----RNCGLS 251
+ E+ ++ L P A L ++ K H +L +N
Sbjct: 597 DVAFPDFRCEEG---QEEVGCLPRPQCPQECACLDTVVRCSNK-HLQALPKGIPKNVTEL 652
Query: 252 RLPANTF-------HRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRS 304
L N F F LQ +D+S+N + + + + L L + Y+ LQ I
Sbjct: 653 YLDGNQFTLVPGQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPL 712
Query: 305 TFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELN------NCGLTRLNETVFHENY 358
F + SL+ L L GN + TL+ G+F ++T LS L + +C L L+ V Y
Sbjct: 713 AFQGLRSLRLLSLHGNDVSTLQEGIFADVTSLSHLAIGANPLYCDCHLRWLSSWV-KTGY 771
Query: 359 TYPDLEELRLSGNP 372
P + R +G P
Sbjct: 772 KEPGIA--RCAGPP 783
Score = 123 (48.4 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 31/88 (35%), Positives = 45/88 (51%)
Query: 286 ESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCG 345
++L LD+ ++LQ + R F T LK L L N++ +E G F+ L L VL LNN
Sbjct: 19 QALSRLDLSENSLQAVPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNN 78
Query: 346 LTRLNETVFHENYTYPDLEELRLSGNPL 373
+T + + F+ P L RL N L
Sbjct: 79 ITTIPVSSFNH---MPKLRTFRLHSNHL 103
Score = 89 (36.4 bits), Expect = 6.0e-15, Sum P(2) = 6.0e-15
Identities = 26/129 (20%), Positives = 51/129 (39%)
Query: 419 LEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNN 478
L+++ LS N + + G +++ + +F + +L L NN
Sbjct: 453 LKKINLSNNKVSEIEDGTFEGATSVSELHLTAN--QLESVRSGMFRGLDGLRTLMLRNNR 510
Query: 479 LSMTSELSFQFXXXXXXXXXXXXXXXXXTHISPTVLRHNRAITSIKLVGNPWKCDCNIAD 538
+S SF T ISP +A++++ L+ NP+ C+C +A
Sbjct: 511 ISCIHNDSF---TGLRNVRLLSLYDNHITTISPGAFDTLQALSTLNLLANPFNCNCQLAW 567
Query: 539 MWEWATREK 547
+ +W + K
Sbjct: 568 LGDWLRKRK 576
Score = 66 (28.3 bits), Expect = 8.9e-17, Sum P(2) = 8.9e-17
Identities = 26/125 (20%), Positives = 46/125 (36%)
Query: 418 DLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANN 477
++ EL L GN ++P G KI L + F N +T+L L+ N
Sbjct: 648 NVTELYLDGNQFTLVP-GQLSTFKYLQLVDLSNN--KISSLSNSSFTNMSQLTTLILSYN 704
Query: 478 NLSMTSELSFQFXXXXXXXXXXXXXXXXXTHISPTVLRHNRAITSIKLVGNPWKCDCNIA 537
L L+FQ + + + +++ + + NP CDC++
Sbjct: 705 ALQCIPPLAFQ---GLRSLRLLSLHGNDVSTLQEGIFADVTSLSHLAIGANPLYCDCHLR 761
Query: 538 DMWEW 542
+ W
Sbjct: 762 WLSSW 766
Score = 62 (26.9 bits), Expect = 8.2e-05, Sum P(2) = 8.2e-05
Identities = 23/83 (27%), Positives = 32/83 (38%)
Query: 454 KIDYLPPNVFNNTRNITSLNLANNNLSMTSELSFQFXXXXXXXXXXXXXXXXXTHISPTV 513
KI LP VF + L L N ++ +FQ + T
Sbjct: 254 KITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTS 313
Query: 514 LRHNRAITSIKLVGNPWKCDCNI 536
LR AI ++ L NP+ CDCN+
Sbjct: 314 LR---AIQTLHLAQNPFICDCNL 333
Score = 53 (23.7 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 10/34 (29%), Positives = 20/34 (58%)
Query: 455 IDYLPPNVFNNTRNITSLNLANNNLSMTSELSFQ 488
I +PP F+ R + ++L+NN ++ + +FQ
Sbjct: 207 IKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQ 240
Score = 41 (19.5 bits), Expect = 5.6e-10, Sum P(2) = 5.6e-10
Identities = 7/27 (25%), Positives = 16/27 (59%)
Query: 462 VFNNTRNITSLNLANNNLSMTSELSFQ 488
+F ++ +NL+NN +S + +F+
Sbjct: 446 LFKKLSHLKKINLSNNKVSEIEDGTFE 472
>UNIPROTKB|Q14392 [details] [associations]
symbol:LRRC32 "Leucine-rich repeat-containing protein 32"
species:9606 "Homo sapiens" [GO:0010628 "positive regulation of
gene expression" evidence=IEA] [GO:0046007 "negative regulation of
activated T cell proliferation" evidence=IEA] [GO:0050710 "negative
regulation of cytokine secretion" evidence=IEA] [GO:0005887
"integral to plasma membrane" evidence=TAS] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005887 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 GO:GO:0010628 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0046007 GO:GO:0050710 EMBL:Z24680
EMBL:BC052210 EMBL:BC070079 IPI:IPI00030280 PIR:S42799
RefSeq:NP_001122394.1 RefSeq:NP_005503.1 UniGene:Hs.151641
ProteinModelPortal:Q14392 SMR:Q14392 DIP:DIP-48932N STRING:Q14392
PhosphoSite:Q14392 DMDM:2498405 PaxDb:Q14392 PRIDE:Q14392
Ensembl:ENST00000260061 Ensembl:ENST00000404995
Ensembl:ENST00000407242 GeneID:2615 KEGG:hsa:2615 UCSC:uc001oxq.4
CTD:2615 GeneCards:GC11M076368 H-InvDB:HIX0036396 HGNC:HGNC:4161
MIM:137207 neXtProt:NX_Q14392 PharmGKB:PA28574 HOGENOM:HOG000113368
HOVERGEN:HBG052348 InParanoid:Q14392 OMA:CCGNGWL OrthoDB:EOG4DBTF0
PhylomeDB:Q14392 ChiTaRS:LRRC32 GenomeRNAi:2615 NextBio:10297
ArrayExpress:Q14392 Bgee:Q14392 CleanEx:HS_LRRC32
Genevestigator:Q14392 GermOnline:ENSG00000137507 Uniprot:Q14392
Length = 662
Score = 240 (89.5 bits), Expect = 9.2e-17, P = 9.2e-17
Identities = 113/368 (30%), Positives = 166/368 (45%)
Query: 17 PGLITINLNANPIQP--VEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGN 74
P + +++L+ N + +E A SL L + E +L+++ F ++ L +LDL N
Sbjct: 124 PRVTSLDLSGNSLYSGLLERLLGEAPSLHTLSLAENSLTRLTRHTFRDMPALEQLDLHSN 183
Query: 75 PLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVL 134
L IE G F+ L L +L L+R +LT IS F +L L+ L+LS N +++ +
Sbjct: 184 VLMDIEDGAFEGLPRLTHLNLSRNSLTCISD--F-SLQQLRVLDLSCNSIEAFQTASQPQ 240
Query: 135 GNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLD 194
+L LDLR++ + + PD A L LNL+ N LI L +H S
Sbjct: 241 AEF-QLTWLDLRENKLLHFPD--LAALPRLIYLNLSNN-LIRLPTGPPQDSKGIHAPSEG 296
Query: 195 LSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSL-RNCGLSRL 253
S L P + ++L L LS N + S L+ LT L L+L RNC L
Sbjct: 297 WSALPLSAPSGNASGRPLSQLLNLDLSYNEIELIPDSF-LEHLTSLCFLNLSRNC-LRTF 354
Query: 254 PANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLK 313
A CL LD+SHN L + L SL L + + L+ + TF + SL+
Sbjct: 355 EARRLGSLPCLMLLDLSHNAL-ETLELGARALGSLRTLLLQGNALRDLPPYTFANLASLQ 413
Query: 314 TLILSGNKL-------ETLESGL--FQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLE 364
L L GN++ E SG F +T L L L + + L F + L
Sbjct: 414 RLNLQGNRVSPCGGPDEPGPSGCVAFSGITSLRSLSLVDNEIELLRAGAF----LHTPLT 469
Query: 365 ELRLSGNP 372
EL LS NP
Sbjct: 470 ELDLSSNP 477
Score = 202 (76.2 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 105/339 (30%), Positives = 152/339 (44%)
Query: 64 TTLNKLDLSGNPLRIIEPGVFDPLTSLEYLML--NRCNL-TYISPSAFDNLNHLKTLELS 120
T L LDLS N + ++PG F LT LE+L L NR + T +S L + +L+LS
Sbjct: 73 TALRHLDLSTNEISFLQPGAFQALTHLEHLSLAHNRLAMATALSAGGLGPLPRVTSLDLS 132
Query: 121 QNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVA 180
N L S + L LG L TL L ++ ++ L + F + L L+L N L+D++
Sbjct: 133 GNSLYSGLLERL-LGEAPSLHTLSLAENSLTRLTRHTFRDMPALEQLDLHSNVLMDIEDG 191
Query: 181 TTLG-QNLVHLD----SL----DLSNCHLK----GPLSEDAFVNATKLRTLY-LSGNPLS 226
G L HL+ SL D S L+ S +AF A++ + + L+ L
Sbjct: 192 AFEGLPRLTHLNLSRNSLTCISDFSLQQLRVLDLSCNSIEAFQTASQPQAEFQLTWLDLR 251
Query: 227 AADLS--VALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPL-IDAFTALLS 283
L L L +L L+L N L RLP + + L + A + S
Sbjct: 252 ENKLLHFPDLAALPRLIYLNLSN-NLIRLPTGPPQDSKGIHAPSEGWSALPLSAPSGNAS 310
Query: 284 --PLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLEL 341
PL L +LD+ Y+ ++ I S +TSL L LS N L T E+ +L L +L+L
Sbjct: 311 GRPLSQLLNLDLSYNEIELIPDSFLEHLTSLCFLNLSRNCLRTFEARRLGSLPCLMLLDL 370
Query: 342 NNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDST 380
++ L ET+ L L L GN L LP T
Sbjct: 371 SHNAL----ETLELGARALGSLRTLLLQGNALRDLPPYT 405
Score = 187 (70.9 bits), Expect = 5.6e-11, P = 5.6e-11
Identities = 93/280 (33%), Positives = 132/280 (47%)
Query: 63 LTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQN 122
L+ L LDLS N + +I + LTSL +L L+R L +L L L+LS N
Sbjct: 314 LSQLLNLDLSYNEIELIPDSFLEHLTSLCFLNLSRNCLRTFEARRLGSLPCLMLLDLSHN 373
Query: 123 KLKSHIDWTLVLGN--LGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDL--- 177
L+ TL LG LG L TL L+ + + +LP FAN L+ LNL N +
Sbjct: 374 ALE-----TLELGARALGSLRTLLLQGNALRDLPPYTFANLASLQRLNLQGNRVSPCGGP 428
Query: 178 DVATTLG----QNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNP-LSAADLSV 232
D G + L SL L + ++ L AF++ T L L LS NP L A +
Sbjct: 429 DEPGPSGCVAFSGITSLRSLSLVDNEIE-LLRAGAFLH-TPLTELDLSSNPGLEVA--TG 484
Query: 233 ALKPL-TKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPL--IDAFTALLSPLESLE 289
AL L L L+L+ GL L + F CL+ L+++ N L + A+T +S LE
Sbjct: 485 ALGGLEASLEVLALQGNGLMVLQVD-LPCFICLKRLNLAENRLSHLPAWTQAVS----LE 539
Query: 290 HLDMGYSNLQRISRSTFLKM-TSLKTLILSGNKLETLESG 328
LD+ ++ + S + TSL+ L L GN L +G
Sbjct: 540 VLDLRNNSFSLLPGSAMGGLETSLRRLYLQGNPLSCCGNG 579
Score = 177 (67.4 bits), Expect = 6.9e-10, P = 6.9e-10
Identities = 76/257 (29%), Positives = 114/257 (44%)
Query: 141 DTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHL 200
+TLDL + + ++ + T LR+L+L+ NE+ L Q L HL+ L L++ L
Sbjct: 52 ETLDLSGNQLRSILASPLGFYTALRHLDLSTNEISFLQPGAF--QALTHLEHLSLAHNRL 109
Query: 201 K--GPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTF 258
LS ++ +L LSGN L + L L LH LSL L+RL +TF
Sbjct: 110 AMATALSAGGLGPLPRVTSLDLSGNSLYSGLLERLLGEAPSLHTLSLAENSLTRLTRHTF 169
Query: 259 HRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILS 318
L++LD+ N L+D L L HL++ ++L IS + L+ L LS
Sbjct: 170 RDMPALEQLDLHSNVLMDIEDGAFEGLPRLTHLNLSRNSLTCISD---FSLQQLRVLDLS 226
Query: 319 GNKLETLESGLF-QNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLP 377
N +E ++ Q L+ L+L L F + P L L LS N + LP
Sbjct: 227 CNSIEAFQTASQPQAEFQLTWLDLRENKLLH-----FPDLAALPRLIYLNLSNNLIR-LP 280
Query: 378 DSTKQYSMRT-IPTQIW 393
Q S P++ W
Sbjct: 281 TGPPQDSKGIHAPSEGW 297
Score = 167 (63.8 bits), Expect = 8.4e-09, P = 8.4e-09
Identities = 72/236 (30%), Positives = 113/236 (47%)
Query: 69 LDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHI 128
LDLSGN LR I T+L +L L+ ++++ P AF L HL+ L L+ N+L
Sbjct: 54 LDLSGNQLRSILASPLGFYTALRHLDLSTNEISFLQPGAFQALTHLEHLSLAHNRLAMAT 113
Query: 129 DWTLV-LGNLGKLDTLDLRQSGI-SNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQN 186
+ LG L ++ +LDL + + S L + + L L+LAEN L L T ++
Sbjct: 114 ALSAGGLGPLPRVTSLDLSGNSLYSGLLERLLGEAPSLHTLSLAENSLTRLTRHTF--RD 171
Query: 187 LVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSA-ADLSVALKPLTKLHRLSL 245
+ L+ LDL + L + + AF +L L LS N L+ +D S+ + L S+
Sbjct: 172 MPALEQLDLHSNVLMD-IEDGAFEGLPRLTHLNLSRNSLTCISDFSLQQLRVLDLSCNSI 230
Query: 246 RNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRI 301
+ P F L LD+ N L+ F L + L L +L++ +NL R+
Sbjct: 231 EAFQTASQPQAEFQ----LTWLDLRENKLLH-FPDLAA-LPRLIYLNLS-NNLIRL 279
Score = 156 (60.0 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 75/229 (32%), Positives = 103/229 (44%)
Query: 10 DRRNLDN-PGLITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNK 68
+ R L + P L+ ++L+ N ++ +E SL L +Q L + P F NL +L +
Sbjct: 355 EARRLGSLPCLMLLDLSHNALETLELGARALGSLRTLLLQGNALRDLPPYTFANLASLQR 414
Query: 69 LDLSGNPLRII----EPG-----VFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLEL 119
L+L GN + EPG F +TSL L L + + AF + L L+L
Sbjct: 415 LNLQGNRVSPCGGPDEPGPSGCVAFSGITSLRSLSLVDNEIELLRAGAFLH-TPLTELDL 473
Query: 120 SQNKLKSHIDWTLVLGNL-GKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLD 178
S N T LG L L+ L L+ +G+ L ++ L+ LNLAEN L L
Sbjct: 474 SSNPGLEVA--TGALGGLEASLEVLALQGNGLMVLQVDLPCF-ICLKRLNLAENRLSHLP 530
Query: 179 VATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNA-TKLRTLYLSGNPLS 226
T V L+ LDL N L A T LR LYL GNPLS
Sbjct: 531 AWT----QAVSLEVLDLRNNSFS-LLPGSAMGGLETSLRRLYLQGNPLS 574
Score = 145 (56.1 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 84/275 (30%), Positives = 120/275 (43%)
Query: 111 LNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLA 170
L+ L L+LS N+++ D L +L L L+L ++ + + L L+L+
Sbjct: 314 LSQLLNLDLSYNEIELIPD--SFLEHLTSLCFLNLSRNCLRTFEARRLGSLPCLMLLDLS 371
Query: 171 ENELIDLDV-ATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGN---PLS 226
N L L++ A LG L +L L L+ L F N L+ L L GN P
Sbjct: 372 HNALETLELGARALGS----LRTLLLQGNALRD-LPPYTFANLASLQRLNLQGNRVSPCG 426
Query: 227 AADLS-----VALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTAL 281
D VA +T L LSL + + L A F T L ELD+S NP ++ T
Sbjct: 427 GPDEPGPSGCVAFSGITSLRSLSLVDNEIELLRAGAFLH-TPLTELDLSSNPGLEVATGA 485
Query: 282 LSPLE-SLEHLDMGYSNLQ--RISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSV 338
L LE SLE L + + L ++ F+ LK L L+ N+L L + + L V
Sbjct: 486 LGGLEASLEVLALQGNGLMVLQVDLPCFI---CLKRLNLAENRLSHLPA--WTQAVSLEV 540
Query: 339 LELNNCGLTRLNETVFHENYTYPDLEELRLSGNPL 373
L+L N + L + T L L L GNPL
Sbjct: 541 LDLRNNSFSLLPGSAMGGLET--SLRRLYLQGNPL 573
Score = 143 (55.4 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 79/310 (25%), Positives = 128/310 (41%)
Query: 191 DSLDLSNCHLKGPLSED-AFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCG 249
++LDLS L+ L+ F A LR L LS N +S A + LT L LSL +
Sbjct: 52 ETLDLSGNQLRSILASPLGFYTA--LRHLDLSTNEISFLQPG-AFQALTHLEHLSLAHNR 108
Query: 250 LSR---LPANTFHRFTCLQELDISHNPLIDAFTA-LLSPLESLEHLDMGYSNLQRISRST 305
L+ L A + LD+S N L LL SL L + ++L R++R T
Sbjct: 109 LAMATALSAGGLGPLPRVTSLDLSGNSLYSGLLERLLGEAPSLHTLSLAENSLTRLTRHT 168
Query: 306 FLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEE 365
F M +L+ L L N L +E G F+ L L+ L L+ LT +++ ++ L
Sbjct: 169 FRDMPALEQLDLHSNVLMDIEDGAFEGLPRLTHLNLSRNSLTCISD------FSLQQLRV 222
Query: 366 LRLSGNPLHVLPDSTK---QYSMRTIPTQIWKNFDF--------LVILFILNETVFHENY 414
L LS N + +++ ++ + + + K F L+ L + N +
Sbjct: 223 LDLSCNSIEAFQTASQPQAEFQLTWLDLRENKLLHFPDLAALPRLIYLNLSNNLIRLPTG 282
Query: 415 TYPDLEELRL-----SGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNI 469
D + + S PL P+GN +I+ +P + + ++
Sbjct: 283 PPQDSKGIHAPSEGWSALPLSA-PSGNASGRPLSQLLNLDLSYNEIELIPDSFLEHLTSL 341
Query: 470 TSLNLANNNL 479
LNL+ N L
Sbjct: 342 CFLNLSRNCL 351
>RGD|69307 [details] [associations]
symbol:Slit1 "slit homolog 1 (Drosophila)" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005615
"extracellular space" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0007409 "axonogenesis" evidence=ISO]
[GO:0007411 "axon guidance" evidence=ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0008045 "motor neuron axon guidance"
evidence=IEA;ISO] [GO:0021510 "spinal cord development"
evidence=IEP] [GO:0021772 "olfactory bulb development" evidence=ISO]
[GO:0022028 "tangential migration from the subventricular zone to
the olfactory bulb" evidence=IEA;ISO] [GO:0022029 "telencephalon
cell migration" evidence=ISO] [GO:0031290 "retinal ganglion cell
axon guidance" evidence=IEA;ISO] [GO:0033563 "dorsal/ventral axon
guidance" evidence=IEA;ISO] [GO:0040023 "establishment of nucleus
localization" evidence=IEA;ISO] [GO:0043395 "heparan sulfate
proteoglycan binding" evidence=IDA] [GO:0048495 "Roundabout binding"
evidence=IEA;ISO] [GO:0048812 "neuron projection morphogenesis"
evidence=ISO] [GO:0048843 "negative regulation of axon extension
involved in axon guidance" evidence=IDA] [GO:0048846 "axon extension
involved in axon guidance" evidence=IEA;ISO] [GO:0050919 "negative
chemotaxis" evidence=IEA;ISO] [GO:0051964 "negative regulation of
synapse assembly" evidence=ISS] [GO:0021834 "chemorepulsion involved
in embryonic olfactory bulb interneuron precursor migration"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 RGD:69307 GO:GO:0005737 GO:GO:0005615
GO:GO:0007420 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0008045 PROSITE:PS01186
GO:GO:0043395 InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274
SMART:SM00282 PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 GO:GO:0048846 Pfam:PF12661 GO:GO:0033563 GO:GO:0051964
Pfam:PF01463 GO:GO:0022028 GO:GO:0050919 GO:GO:0048843 CTD:6585
HOGENOM:HOG000116120 HOVERGEN:HBG057959 KO:K06838 OrthoDB:EOG4VDPXM
EMBL:AB011530 EMBL:AF133730 EMBL:AB073213 EMBL:AB073214
EMBL:AB073215 EMBL:AB017170 IPI:IPI00389760 IPI:IPI00409983
IPI:IPI00409984 IPI:IPI00409985 PIR:T42218 RefSeq:NP_075242.1
UniGene:Rn.30002 ProteinModelPortal:O88279 SMR:O88279 STRING:O88279
PRIDE:O88279 GeneID:65047 KEGG:rno:65047 UCSC:RGD:69307
InParanoid:O88279 NextBio:613884 ArrayExpress:O88279
Genevestigator:O88279 GermOnline:ENSRNOG00000026065 Uniprot:O88279
Length = 1531
Score = 231 (86.4 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 91/341 (26%), Positives = 151/341 (44%)
Query: 17 PGLIT-INLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGN 74
P +T I L N I+ + GAF R L + + +++I P F L +LN L L GN
Sbjct: 308 PETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGN 367
Query: 75 PLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVL 134
+ + GVF L +L+ L+LN + I P AF +L +L L L NK++S T
Sbjct: 368 KITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFT- 426
Query: 135 GNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLD 194
+L + TL L Q+ P N WL + L N + + L +
Sbjct: 427 -SLRAIQTLHLAQN-----PFICDCNLKWLADF-LRTNPIETTGARCASPRRLANKRIGQ 479
Query: 195 LSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLP 254
+ + + E F+ T+ +L N +D++ K + + LS++P
Sbjct: 480 IKSKKFRCSAKEQYFIPGTE--DYHL--NSECTSDVACPHKCRCEASVVECSGLKLSKIP 535
Query: 255 ANTFHRFTCLQELDISHNPL-IDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLK 313
T EL +++N + I T L L L+ +++ + + I TF TS+
Sbjct: 536 ERIPQSTT---ELRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGATSVS 592
Query: 314 TLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVF 354
L L+ N+LE++ SG+F+ L L L L N ++ ++ F
Sbjct: 593 ELHLTANQLESVRSGMFRGLDGLRTLMLRNNRISCIHNDSF 633
Score = 195 (73.7 bits), Expect = 3.4e-15, Sum P(2) = 3.4e-15
Identities = 85/334 (25%), Positives = 139/334 (41%)
Query: 15 DNPGLITINLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSG 73
D L + LN N +Q + E F ++L L + E +L + + F T L L L
Sbjct: 107 DMKELERLRLNRNQLQVLPELLFQNNQALSRLDLSENSLQAVPRKAFRGATDLKNLQLDK 166
Query: 74 NPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKL--KSHIDWT 131
N + IE G F L LE L LN N+T I S+F+++ L+T L N L H+ W
Sbjct: 167 NQISCIEEGAFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWL 226
Query: 132 LVLGNLGKLDTLDL--RQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVH 189
L + T+ L + SG ++L A + E + T +
Sbjct: 227 SQW--LRQRPTIGLFTQCSGPASLRGLNVAEVQKSEFSCSGQGEAAQVPACTLSSGSCPA 284
Query: 190 LDSLD--LSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRN 247
+ S + +C KG + A + T + + L N + + A P KL R+ L N
Sbjct: 285 MCSCSNGIVDCRGKGLTAIPANLPET-MTEIRLELNGIKSIPPG-AFSPYRKLRRIDLSN 342
Query: 248 CGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFL 307
++ + + F L L + N + D + L +L+ L + + + I F
Sbjct: 343 NQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQ 402
Query: 308 KMTSLKTLILSGNKLETLESGLFQNLTHLSVLEL 341
+ +L L L NK+++L G F +L + L L
Sbjct: 403 DLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHL 436
Score = 183 (69.5 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 94/354 (26%), Positives = 152/354 (42%)
Query: 38 VARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNR 97
+ R+ L + +++I+ F L L L L N + +E G FD + LE L LNR
Sbjct: 59 IPRNTERLELNGNNITRIHKNDFAGLKQLRVLQLMENQIGAVERGAFDDMKELERLRLNR 118
Query: 98 CNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNV 157
L + F N L L+LS+N L++ + G L L L ++ IS + +
Sbjct: 119 NQLQVLPELLFQNNQALSRLDLSENSLQA-VPRKAFRGATD-LKNLQLDKNQISCIEEGA 176
Query: 158 FANNTWLRNLNLAENELIDLDVAT-----TLGQNLVHLDSLDLSNCHLKGPLSEDAFVNA 212
F L L L N + + V++ L +H + L +CHL LS+
Sbjct: 177 FRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHL-FCDCHLAW-LSQWLRQRP 234
Query: 213 TKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCG-LSRLPANTFHRFTCLQELDISH 271
T SG P S L+VA + K S G +++PA T +C S
Sbjct: 235 TIGLFTQCSG-PASLRGLNVA--EVQK-SEFSCSGQGEAAQVPACTLSSGSCPAMCSCS- 289
Query: 272 NPLIDA----FTALLSPL-ESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLE 326
N ++D TA+ + L E++ + + + ++ I F L+ + LS N++ +
Sbjct: 290 NGIVDCRGKGLTAIPANLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIA 349
Query: 327 SGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVL-PDS 379
FQ L L+ L L +T L VF YT L+ L L+ N ++ + PD+
Sbjct: 350 PDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYT---LQLLLLNANKINCIRPDA 400
Score = 172 (65.6 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 78/337 (23%), Positives = 138/337 (40%)
Query: 22 INLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIE 80
I+L+ N I + AF RSL L + ++ + F L TL L L+ N + I
Sbjct: 338 IDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLNANKINCIR 397
Query: 81 PGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKL--KSHIDWTLVLGNLG 138
P F L +L L L + ++ F +L ++TL L+QN ++ W
Sbjct: 398 PDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRTN 457
Query: 139 KLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDS---LDL 195
++T R + L N + + E + G HL+S D+
Sbjct: 458 PIETTGARCASPRRLA-NKRIGQIKSKKFRCSAKEQYFIP-----GTEDYHLNSECTSDV 511
Query: 196 S---NCHLKGPLSEDAFVNATKL--------RTLYLSGNPLSAADLSVALKPLTKLHRLS 244
+ C + + E + + +K+ L L+ N +S + + K L+ L +++
Sbjct: 512 ACPHKCRCEASVVECSGLKLSKIPERIPQSTTELRLNNNEISILEATGLFKKLSHLKKIN 571
Query: 245 LRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRS 304
L N +S + TF T + EL ++ N L + + L+ L L + + + I
Sbjct: 572 LSNNKVSEIEDGTFEGATSVSELHLTANQLESVRSGMFRGLDGLRTLMLRNNRISCIHND 631
Query: 305 TFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLEL 341
+F + +++ L L N + T+ G F L LS L L
Sbjct: 632 SFTGLRNVRLLSLYDNHITTISPGAFDTLQALSTLNL 668
Score = 161 (61.7 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 96/374 (25%), Positives = 154/374 (41%)
Query: 22 INLNANPIQPVE--GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRII 79
+ LN N I +E G F L + + +S+I F T++++L L+ N L +
Sbjct: 545 LRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGATSVSELHLTANQLESV 604
Query: 80 EPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLG---N 136
G+F L L LML ++ I +F L +++ L L N HI T+ G
Sbjct: 605 RSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDN----HIT-TISPGAFDT 659
Query: 137 LGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLS 196
L L TL+L ++N P N WL + L + +++ QN L + L
Sbjct: 660 LQALSTLNL----LAN-PFNCNCQLAWLGDW-LRKRKIV---TGNPRCQNPDFLRQIPLQ 710
Query: 197 NCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSL-----RNCGLS 251
+ E+ ++ L P A L ++ K H +L +N
Sbjct: 711 DVAFPDFRCEEG---QEEVGCLPRPQCPQECACLDTVVRCSNK-HLQALPKGIPKNVTEL 766
Query: 252 RLPANTF-------HRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRS 304
L N F F LQ +D+S+N + + + + L L + Y+ LQ I
Sbjct: 767 YLDGNQFTLVPGQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPL 826
Query: 305 TFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELN------NCGLTRLNETVFHENY 358
F + SL+ L L GN + TL+ G+F ++T LS L + +C L L+ V Y
Sbjct: 827 AFQGLRSLRLLSLHGNDVSTLQEGIFADVTSLSHLAIGANPLYCDCHLRWLSSWV-KTGY 885
Query: 359 TYPDLEELRLSGNP 372
P + R +G P
Sbjct: 886 KEPGIA--RCAGPP 897
Score = 118 (46.6 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 30/93 (32%), Positives = 49/93 (52%)
Query: 282 LSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLEL 341
LS + L+ +D+ + + +S S+F M+ L TLILS N L+ + FQ L L +L L
Sbjct: 780 LSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSL 839
Query: 342 NNCGLTRLNETVFHENYTYPDLEELRLSGNPLH 374
+ ++ L E +F + L L + NPL+
Sbjct: 840 HGNDVSTLQEGIFAD---VTSLSHLAIGANPLY 869
Score = 112 (44.5 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 48/181 (26%), Positives = 71/181 (39%)
Query: 142 TLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLK 201
T+D +G+ +P N+ NT L L N + + G L L L L +
Sbjct: 44 TVDCHGTGLQAIPKNI-PRNT--ERLELNGNNITRIHKNDFAG--LKQLRVLQLMENQI- 97
Query: 202 GPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRF 261
G + AF + +L L L+ N L + + L RL L L +P F
Sbjct: 98 GAVERGAFDDMKELERLRLNRNQLQVLP-ELLFQNNQALSRLDLSENSLQAVPRKAFRGA 156
Query: 262 TCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNK 321
T L+ L + N + L LE L + +N+ I S+F M L+T L N
Sbjct: 157 TDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNH 216
Query: 322 L 322
L
Sbjct: 217 L 217
Score = 105 (42.0 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 34/107 (31%), Positives = 50/107 (46%)
Query: 19 LITINLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLR 77
L + L N I VE GAF + L L + L + F N L++LDLS N L+
Sbjct: 87 LRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLQVLPELLFQNNQALSRLDLSENSLQ 146
Query: 78 IIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKL 124
+ F T L+ L L++ ++ I AF L L+ L L+ N +
Sbjct: 147 AVPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNI 193
Score = 89 (36.4 bits), Expect = 3.4e-15, Sum P(2) = 3.4e-15
Identities = 26/129 (20%), Positives = 51/129 (39%)
Query: 419 LEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNN 478
L+++ LS N + + G +++ + +F + +L L NN
Sbjct: 567 LKKINLSNNKVSEIEDGTFEGATSVSELHLTAN--QLESVRSGMFRGLDGLRTLMLRNNR 624
Query: 479 LSMTSELSFQFXXXXXXXXXXXXXXXXXTHISPTVLRHNRAITSIKLVGNPWKCDCNIAD 538
+S SF T ISP +A++++ L+ NP+ C+C +A
Sbjct: 625 ISCIHNDSF---TGLRNVRLLSLYDNHITTISPGAFDTLQALSTLNLLANPFNCNCQLAW 681
Query: 539 MWEWATREK 547
+ +W + K
Sbjct: 682 LGDWLRKRK 690
Score = 66 (28.3 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 26/125 (20%), Positives = 46/125 (36%)
Query: 418 DLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANN 477
++ EL L GN ++P G KI L + F N +T+L L+ N
Sbjct: 762 NVTELYLDGNQFTLVP-GQLSTFKYLQLVDLSNN--KISSLSNSSFTNMSQLTTLILSYN 818
Query: 478 NLSMTSELSFQFXXXXXXXXXXXXXXXXXTHISPTVLRHNRAITSIKLVGNPWKCDCNIA 537
L L+FQ + + + +++ + + NP CDC++
Sbjct: 819 ALQCIPPLAFQ---GLRSLRLLSLHGNDVSTLQEGIFADVTSLSHLAIGANPLYCDCHLR 875
Query: 538 DMWEW 542
+ W
Sbjct: 876 WLSSW 880
Score = 62 (26.9 bits), Expect = 4.2e-11, Sum P(2) = 4.2e-11
Identities = 23/83 (27%), Positives = 32/83 (38%)
Query: 454 KIDYLPPNVFNNTRNITSLNLANNNLSMTSELSFQFXXXXXXXXXXXXXXXXXTHISPTV 513
KI LP VF + L L N ++ +FQ + T
Sbjct: 368 KITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTS 427
Query: 514 LRHNRAITSIKLVGNPWKCDCNI 536
LR AI ++ L NP+ CDCN+
Sbjct: 428 LR---AIQTLHLAQNPFICDCNL 447
Score = 41 (19.5 bits), Expect = 3.2e-10, Sum P(2) = 3.2e-10
Identities = 7/27 (25%), Positives = 16/27 (59%)
Query: 462 VFNNTRNITSLNLANNNLSMTSELSFQ 488
+F ++ +NL+NN +S + +F+
Sbjct: 560 LFKKLSHLKKINLSNNKVSEIEDGTFE 586
>UNIPROTKB|O88279 [details] [associations]
symbol:Slit1 "Slit homolog 1 protein" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 RGD:69307 GO:GO:0005737 GO:GO:0005615
GO:GO:0007420 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0008045 PROSITE:PS01186
GO:GO:0043395 InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274
SMART:SM00282 PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 GO:GO:0048846 Pfam:PF12661 GO:GO:0033563 GO:GO:0051964
Pfam:PF01463 GO:GO:0022028 GO:GO:0050919 GO:GO:0048843 CTD:6585
HOGENOM:HOG000116120 HOVERGEN:HBG057959 KO:K06838 OrthoDB:EOG4VDPXM
EMBL:AB011530 EMBL:AF133730 EMBL:AB073213 EMBL:AB073214
EMBL:AB073215 EMBL:AB017170 IPI:IPI00389760 IPI:IPI00409983
IPI:IPI00409984 IPI:IPI00409985 PIR:T42218 RefSeq:NP_075242.1
UniGene:Rn.30002 ProteinModelPortal:O88279 SMR:O88279 STRING:O88279
PRIDE:O88279 GeneID:65047 KEGG:rno:65047 UCSC:RGD:69307
InParanoid:O88279 NextBio:613884 ArrayExpress:O88279
Genevestigator:O88279 GermOnline:ENSRNOG00000026065 Uniprot:O88279
Length = 1531
Score = 231 (86.4 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 91/341 (26%), Positives = 151/341 (44%)
Query: 17 PGLIT-INLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGN 74
P +T I L N I+ + GAF R L + + +++I P F L +LN L L GN
Sbjct: 308 PETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGN 367
Query: 75 PLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVL 134
+ + GVF L +L+ L+LN + I P AF +L +L L L NK++S T
Sbjct: 368 KITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFT- 426
Query: 135 GNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLD 194
+L + TL L Q+ P N WL + L N + + L +
Sbjct: 427 -SLRAIQTLHLAQN-----PFICDCNLKWLADF-LRTNPIETTGARCASPRRLANKRIGQ 479
Query: 195 LSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLP 254
+ + + E F+ T+ +L N +D++ K + + LS++P
Sbjct: 480 IKSKKFRCSAKEQYFIPGTE--DYHL--NSECTSDVACPHKCRCEASVVECSGLKLSKIP 535
Query: 255 ANTFHRFTCLQELDISHNPL-IDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLK 313
T EL +++N + I T L L L+ +++ + + I TF TS+
Sbjct: 536 ERIPQSTT---ELRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGATSVS 592
Query: 314 TLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVF 354
L L+ N+LE++ SG+F+ L L L L N ++ ++ F
Sbjct: 593 ELHLTANQLESVRSGMFRGLDGLRTLMLRNNRISCIHNDSF 633
Score = 195 (73.7 bits), Expect = 3.4e-15, Sum P(2) = 3.4e-15
Identities = 85/334 (25%), Positives = 139/334 (41%)
Query: 15 DNPGLITINLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSG 73
D L + LN N +Q + E F ++L L + E +L + + F T L L L
Sbjct: 107 DMKELERLRLNRNQLQVLPELLFQNNQALSRLDLSENSLQAVPRKAFRGATDLKNLQLDK 166
Query: 74 NPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKL--KSHIDWT 131
N + IE G F L LE L LN N+T I S+F+++ L+T L N L H+ W
Sbjct: 167 NQISCIEEGAFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWL 226
Query: 132 LVLGNLGKLDTLDL--RQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVH 189
L + T+ L + SG ++L A + E + T +
Sbjct: 227 SQW--LRQRPTIGLFTQCSGPASLRGLNVAEVQKSEFSCSGQGEAAQVPACTLSSGSCPA 284
Query: 190 LDSLD--LSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRN 247
+ S + +C KG + A + T + + L N + + A P KL R+ L N
Sbjct: 285 MCSCSNGIVDCRGKGLTAIPANLPET-MTEIRLELNGIKSIPPG-AFSPYRKLRRIDLSN 342
Query: 248 CGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFL 307
++ + + F L L + N + D + L +L+ L + + + I F
Sbjct: 343 NQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQ 402
Query: 308 KMTSLKTLILSGNKLETLESGLFQNLTHLSVLEL 341
+ +L L L NK+++L G F +L + L L
Sbjct: 403 DLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHL 436
Score = 183 (69.5 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 94/354 (26%), Positives = 152/354 (42%)
Query: 38 VARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNR 97
+ R+ L + +++I+ F L L L L N + +E G FD + LE L LNR
Sbjct: 59 IPRNTERLELNGNNITRIHKNDFAGLKQLRVLQLMENQIGAVERGAFDDMKELERLRLNR 118
Query: 98 CNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNV 157
L + F N L L+LS+N L++ + G L L L ++ IS + +
Sbjct: 119 NQLQVLPELLFQNNQALSRLDLSENSLQA-VPRKAFRGATD-LKNLQLDKNQISCIEEGA 176
Query: 158 FANNTWLRNLNLAENELIDLDVAT-----TLGQNLVHLDSLDLSNCHLKGPLSEDAFVNA 212
F L L L N + + V++ L +H + L +CHL LS+
Sbjct: 177 FRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHL-FCDCHLAW-LSQWLRQRP 234
Query: 213 TKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCG-LSRLPANTFHRFTCLQELDISH 271
T SG P S L+VA + K S G +++PA T +C S
Sbjct: 235 TIGLFTQCSG-PASLRGLNVA--EVQK-SEFSCSGQGEAAQVPACTLSSGSCPAMCSCS- 289
Query: 272 NPLIDA----FTALLSPL-ESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLE 326
N ++D TA+ + L E++ + + + ++ I F L+ + LS N++ +
Sbjct: 290 NGIVDCRGKGLTAIPANLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIA 349
Query: 327 SGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVL-PDS 379
FQ L L+ L L +T L VF YT L+ L L+ N ++ + PD+
Sbjct: 350 PDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYT---LQLLLLNANKINCIRPDA 400
Score = 172 (65.6 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 78/337 (23%), Positives = 138/337 (40%)
Query: 22 INLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIE 80
I+L+ N I + AF RSL L + ++ + F L TL L L+ N + I
Sbjct: 338 IDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLNANKINCIR 397
Query: 81 PGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKL--KSHIDWTLVLGNLG 138
P F L +L L L + ++ F +L ++TL L+QN ++ W
Sbjct: 398 PDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRTN 457
Query: 139 KLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDS---LDL 195
++T R + L N + + E + G HL+S D+
Sbjct: 458 PIETTGARCASPRRLA-NKRIGQIKSKKFRCSAKEQYFIP-----GTEDYHLNSECTSDV 511
Query: 196 S---NCHLKGPLSEDAFVNATKL--------RTLYLSGNPLSAADLSVALKPLTKLHRLS 244
+ C + + E + + +K+ L L+ N +S + + K L+ L +++
Sbjct: 512 ACPHKCRCEASVVECSGLKLSKIPERIPQSTTELRLNNNEISILEATGLFKKLSHLKKIN 571
Query: 245 LRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRS 304
L N +S + TF T + EL ++ N L + + L+ L L + + + I
Sbjct: 572 LSNNKVSEIEDGTFEGATSVSELHLTANQLESVRSGMFRGLDGLRTLMLRNNRISCIHND 631
Query: 305 TFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLEL 341
+F + +++ L L N + T+ G F L LS L L
Sbjct: 632 SFTGLRNVRLLSLYDNHITTISPGAFDTLQALSTLNL 668
Score = 161 (61.7 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 96/374 (25%), Positives = 154/374 (41%)
Query: 22 INLNANPIQPVE--GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRII 79
+ LN N I +E G F L + + +S+I F T++++L L+ N L +
Sbjct: 545 LRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGATSVSELHLTANQLESV 604
Query: 80 EPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLG---N 136
G+F L L LML ++ I +F L +++ L L N HI T+ G
Sbjct: 605 RSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDN----HIT-TISPGAFDT 659
Query: 137 LGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLS 196
L L TL+L ++N P N WL + L + +++ QN L + L
Sbjct: 660 LQALSTLNL----LAN-PFNCNCQLAWLGDW-LRKRKIV---TGNPRCQNPDFLRQIPLQ 710
Query: 197 NCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSL-----RNCGLS 251
+ E+ ++ L P A L ++ K H +L +N
Sbjct: 711 DVAFPDFRCEEG---QEEVGCLPRPQCPQECACLDTVVRCSNK-HLQALPKGIPKNVTEL 766
Query: 252 RLPANTF-------HRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRS 304
L N F F LQ +D+S+N + + + + L L + Y+ LQ I
Sbjct: 767 YLDGNQFTLVPGQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPL 826
Query: 305 TFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELN------NCGLTRLNETVFHENY 358
F + SL+ L L GN + TL+ G+F ++T LS L + +C L L+ V Y
Sbjct: 827 AFQGLRSLRLLSLHGNDVSTLQEGIFADVTSLSHLAIGANPLYCDCHLRWLSSWV-KTGY 885
Query: 359 TYPDLEELRLSGNP 372
P + R +G P
Sbjct: 886 KEPGIA--RCAGPP 897
Score = 118 (46.6 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 30/93 (32%), Positives = 49/93 (52%)
Query: 282 LSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLEL 341
LS + L+ +D+ + + +S S+F M+ L TLILS N L+ + FQ L L +L L
Sbjct: 780 LSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSL 839
Query: 342 NNCGLTRLNETVFHENYTYPDLEELRLSGNPLH 374
+ ++ L E +F + L L + NPL+
Sbjct: 840 HGNDVSTLQEGIFAD---VTSLSHLAIGANPLY 869
Score = 112 (44.5 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 48/181 (26%), Positives = 71/181 (39%)
Query: 142 TLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLK 201
T+D +G+ +P N+ NT L L N + + G L L L L +
Sbjct: 44 TVDCHGTGLQAIPKNI-PRNT--ERLELNGNNITRIHKNDFAG--LKQLRVLQLMENQI- 97
Query: 202 GPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRF 261
G + AF + +L L L+ N L + + L RL L L +P F
Sbjct: 98 GAVERGAFDDMKELERLRLNRNQLQVLP-ELLFQNNQALSRLDLSENSLQAVPRKAFRGA 156
Query: 262 TCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNK 321
T L+ L + N + L LE L + +N+ I S+F M L+T L N
Sbjct: 157 TDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNH 216
Query: 322 L 322
L
Sbjct: 217 L 217
Score = 105 (42.0 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 34/107 (31%), Positives = 50/107 (46%)
Query: 19 LITINLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLR 77
L + L N I VE GAF + L L + L + F N L++LDLS N L+
Sbjct: 87 LRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLQVLPELLFQNNQALSRLDLSENSLQ 146
Query: 78 IIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKL 124
+ F T L+ L L++ ++ I AF L L+ L L+ N +
Sbjct: 147 AVPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNI 193
Score = 89 (36.4 bits), Expect = 3.4e-15, Sum P(2) = 3.4e-15
Identities = 26/129 (20%), Positives = 51/129 (39%)
Query: 419 LEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNN 478
L+++ LS N + + G +++ + +F + +L L NN
Sbjct: 567 LKKINLSNNKVSEIEDGTFEGATSVSELHLTAN--QLESVRSGMFRGLDGLRTLMLRNNR 624
Query: 479 LSMTSELSFQFXXXXXXXXXXXXXXXXXTHISPTVLRHNRAITSIKLVGNPWKCDCNIAD 538
+S SF T ISP +A++++ L+ NP+ C+C +A
Sbjct: 625 ISCIHNDSF---TGLRNVRLLSLYDNHITTISPGAFDTLQALSTLNLLANPFNCNCQLAW 681
Query: 539 MWEWATREK 547
+ +W + K
Sbjct: 682 LGDWLRKRK 690
Score = 66 (28.3 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 26/125 (20%), Positives = 46/125 (36%)
Query: 418 DLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANN 477
++ EL L GN ++P G KI L + F N +T+L L+ N
Sbjct: 762 NVTELYLDGNQFTLVP-GQLSTFKYLQLVDLSNN--KISSLSNSSFTNMSQLTTLILSYN 818
Query: 478 NLSMTSELSFQFXXXXXXXXXXXXXXXXXTHISPTVLRHNRAITSIKLVGNPWKCDCNIA 537
L L+FQ + + + +++ + + NP CDC++
Sbjct: 819 ALQCIPPLAFQ---GLRSLRLLSLHGNDVSTLQEGIFADVTSLSHLAIGANPLYCDCHLR 875
Query: 538 DMWEW 542
+ W
Sbjct: 876 WLSSW 880
Score = 62 (26.9 bits), Expect = 4.2e-11, Sum P(2) = 4.2e-11
Identities = 23/83 (27%), Positives = 32/83 (38%)
Query: 454 KIDYLPPNVFNNTRNITSLNLANNNLSMTSELSFQFXXXXXXXXXXXXXXXXXTHISPTV 513
KI LP VF + L L N ++ +FQ + T
Sbjct: 368 KITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTS 427
Query: 514 LRHNRAITSIKLVGNPWKCDCNI 536
LR AI ++ L NP+ CDCN+
Sbjct: 428 LR---AIQTLHLAQNPFICDCNL 447
Score = 41 (19.5 bits), Expect = 3.2e-10, Sum P(2) = 3.2e-10
Identities = 7/27 (25%), Positives = 16/27 (59%)
Query: 462 VFNNTRNITSLNLANNNLSMTSELSFQ 488
+F ++ +NL+NN +S + +F+
Sbjct: 560 LFKKLSHLKKINLSNNKVSEIEDGTFE 586
>UNIPROTKB|F1MBT2 [details] [associations]
symbol:LINGO1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048715 "negative regulation of oligodendrocyte
differentiation" evidence=IEA] [GO:0043491 "protein kinase B
signaling cascade" evidence=IEA] [GO:0031175 "neuron projection
development" evidence=IEA] [GO:0021954 "central nervous system
neuron development" evidence=IEA] [GO:0005154 "epidermal growth
factor receptor binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0043491
GO:GO:0031175 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GO:GO:0021954 GO:GO:0048715
GeneTree:ENSGT00690000101682 OMA:RIRDRKP EMBL:DAAA02052480
IPI:IPI01003440 Ensembl:ENSBTAT00000031490 Uniprot:F1MBT2
Length = 614
Score = 237 (88.5 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 89/311 (28%), Positives = 144/311 (46%)
Query: 64 TTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNK 123
T LDL N ++ + F LE L LN ++ + P AF+NL +L+TL L N+
Sbjct: 65 TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNR 124
Query: 124 LKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTL 183
LK I + G L L LD+ ++ I L D +F + L++L + +N+L+ +
Sbjct: 125 LKL-IPLGVFTG-LSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFS 182
Query: 184 GQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRL 243
G N L+ L L C+L + +A + L L L ++A + K L +L L
Sbjct: 183 GLN--SLEQLTLEKCNLTS-IPTEALSHLHGLIVLRLRHLNINAIR-DYSFKRLYRLKVL 238
Query: 244 SLRNCG-LSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRIS 302
+ + L + N + L L I+H L + L L L++ Y+ + I
Sbjct: 239 EISHWPYLDTMTPNCLYGLN-LTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIE 297
Query: 303 RSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPD 362
S ++ L+ + L G +L +E F+ L +L VL ++ LT L E+ FH + +
Sbjct: 298 GSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESAFH---SVGN 354
Query: 363 LEELRLSGNPL 373
LE L L NPL
Sbjct: 355 LETLILDSNPL 365
Score = 216 (81.1 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 74/294 (25%), Positives = 135/294 (45%)
Query: 52 LSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNL 111
+ +N F + L +L+L+ N + +EPG F+ L +L L L L I F L
Sbjct: 77 IKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGL 136
Query: 112 NHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAE 171
++L L++S+NK+ +D+ + +L L +L++ + + + F+ L L L +
Sbjct: 137 SNLTKLDISENKIVILLDY--MFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEK 194
Query: 172 NELIDLDVATTLGQNLVHLDSLDLSNC-HLK-GPLSEDAFVNATKLRTLYLSGNPLSAAD 229
L + + L HL L + HL + + +F +L+ L +S P
Sbjct: 195 CNLTSIPT-----EALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTM 249
Query: 230 LSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLE 289
L L L LS+ +C L+ +P L+ L++S+NP+ ++L L L+
Sbjct: 250 TPNCLYGLN-LTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQ 308
Query: 290 HLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNN 343
+ + L + F + L+ L +SGN+L TLE F ++ +L L L++
Sbjct: 309 EIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESAFHSVGNLETLILDS 362
Score = 204 (76.9 bits), Expect = 5.0e-13, Sum P(2) = 5.0e-13
Identities = 87/277 (31%), Positives = 129/277 (46%)
Query: 17 PGLITINLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNP 75
P L + LN N + VE GAF +L L ++ L I FT L+ L KLD+S N
Sbjct: 89 PHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENK 148
Query: 76 LRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLG 135
+ I+ +F L +L+ L + +L YIS AF LN L+ L L + L S I T L
Sbjct: 149 IVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTS-IP-TEALS 206
Query: 136 NLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTL-GQNLVHLDSLD 194
+L L L LR I+ + D F L+ L ++ +D L G NL SL
Sbjct: 207 HLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLT---SLS 263
Query: 195 LSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLP 254
+++C+L + A + LR L LS NP+S + S+ L L +L + L L+ +
Sbjct: 264 ITHCNLTA-VPYLAVRHLVYLRFLNLSYNPISTIEGSM-LHELLRLQEIQLVGGQLAVVE 321
Query: 255 ANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHL 291
F L+ L++S N L + + +LE L
Sbjct: 322 PYAFRGLNYLRVLNVSGNQLTTLEESAFHSVGNLETL 358
Score = 157 (60.3 bits), Expect = 6.8e-08, Sum P(2) = 6.8e-08
Identities = 72/295 (24%), Positives = 121/295 (41%)
Query: 193 LDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSR 252
LDL +K L++D F + L L L+ N +SA + A L L L LR+ L
Sbjct: 70 LDLGKNRIK-TLNQDEFASFPHLEELELNENIVSAVEPG-AFNNLFNLRTLGLRSNRLKL 127
Query: 253 LPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSL 312
+P F + L +LDIS N ++ + L +L+ L++G ++L IS F + SL
Sbjct: 128 IPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSL 187
Query: 313 KTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNP 372
+ L L L ++ + +L L VL L + + + + F Y L+ L +S P
Sbjct: 188 EQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYR---LKVLEISHWP 244
Query: 373 LHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTYPDLEELRLSGNPLHVL 432
Y + I + + + ++ V H Y L L LS NP+ +
Sbjct: 245 YLDTMTPNCLYGLNLTSLSI-THCNLTAVPYL---AVRHLVY----LRFLNLSYNPISTI 296
Query: 433 PTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSF 487
G+ ++ + P F + LN++ N L+ E +F
Sbjct: 297 E-GSMLHELLRLQEIQLVGG-QLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESAF 349
Score = 48 (22.0 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 25/105 (23%), Positives = 41/105 (39%)
Query: 520 ITSIKLVGNPWKCDCNIADMWEWATREKGDIGVLVGSTTPTEIGFGASRKKKGLVC---Y 576
+ ++ L NP CDC + +W + R + + + E G K V Y
Sbjct: 355 LETLILDSNPLACDCRL--LWVFRRRWRLNFNRQQPTCATPEFVQGKEFKDFPDVLLPNY 412
Query: 577 FDIFTTPTRKRPGRELFASTNKTWARYVKEADC--PSSKLFRPPR 619
F R R +++F T ++V AD P + L+ PR
Sbjct: 413 FTCRRARIRDRKAQQVFVDEGHT-VQFVCRADGDPPPAILWLSPR 456
>UNIPROTKB|F1SJ87 [details] [associations]
symbol:LINGO1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048715 "negative regulation of oligodendrocyte
differentiation" evidence=IEA] [GO:0043491 "protein kinase B
signaling cascade" evidence=IEA] [GO:0031175 "neuron projection
development" evidence=IEA] [GO:0021954 "central nervous system
neuron development" evidence=IEA] [GO:0005154 "epidermal growth
factor receptor binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0043491
GO:GO:0031175 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GO:GO:0021954 GO:GO:0048715
GeneTree:ENSGT00690000101682 OMA:RIRDRKP EMBL:CT954219
Ensembl:ENSSSCT00000002097 Uniprot:F1SJ87
Length = 620
Score = 237 (88.5 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 89/311 (28%), Positives = 144/311 (46%)
Query: 64 TTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNK 123
T LDL N ++ + F LE L LN ++ + P AF+NL +L+TL L N+
Sbjct: 71 TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNR 130
Query: 124 LKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTL 183
LK I + G L L LD+ ++ I L D +F + L++L + +N+L+ +
Sbjct: 131 LKL-IPLGVFTG-LSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFS 188
Query: 184 GQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRL 243
G N L+ L L C+L + +A + L L L ++A + K L +L L
Sbjct: 189 GLN--SLEQLTLEKCNLTS-IPTEALSHLHGLIVLRLRHLNINAIR-DYSFKRLYRLKVL 244
Query: 244 SLRNCG-LSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRIS 302
+ + L + N + L L I+H L + L L L++ Y+ + I
Sbjct: 245 EISHWPYLDTMTPNCLYGLN-LTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIE 303
Query: 303 RSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPD 362
S ++ L+ + L G +L +E F+ L +L VL ++ LT L E+ FH + +
Sbjct: 304 GSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESAFH---SVGN 360
Query: 363 LEELRLSGNPL 373
LE L L NPL
Sbjct: 361 LETLILDSNPL 371
Score = 216 (81.1 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 74/294 (25%), Positives = 135/294 (45%)
Query: 52 LSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNL 111
+ +N F + L +L+L+ N + +EPG F+ L +L L L L I F L
Sbjct: 83 IKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGL 142
Query: 112 NHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAE 171
++L L++S+NK+ +D+ + +L L +L++ + + + F+ L L L +
Sbjct: 143 SNLTKLDISENKIVILLDY--MFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEK 200
Query: 172 NELIDLDVATTLGQNLVHLDSLDLSNC-HLK-GPLSEDAFVNATKLRTLYLSGNPLSAAD 229
L + + L HL L + HL + + +F +L+ L +S P
Sbjct: 201 CNLTSIPT-----EALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTM 255
Query: 230 LSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLE 289
L L L LS+ +C L+ +P L+ L++S+NP+ ++L L L+
Sbjct: 256 TPNCLYGLN-LTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQ 314
Query: 290 HLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNN 343
+ + L + F + L+ L +SGN+L TLE F ++ +L L L++
Sbjct: 315 EIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESAFHSVGNLETLILDS 368
Score = 204 (76.9 bits), Expect = 5.2e-13, Sum P(2) = 5.2e-13
Identities = 87/277 (31%), Positives = 129/277 (46%)
Query: 17 PGLITINLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNP 75
P L + LN N + VE GAF +L L ++ L I FT L+ L KLD+S N
Sbjct: 95 PHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENK 154
Query: 76 LRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLG 135
+ I+ +F L +L+ L + +L YIS AF LN L+ L L + L S I T L
Sbjct: 155 IVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTS-IP-TEALS 212
Query: 136 NLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTL-GQNLVHLDSLD 194
+L L L LR I+ + D F L+ L ++ +D L G NL SL
Sbjct: 213 HLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLT---SLS 269
Query: 195 LSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLP 254
+++C+L + A + LR L LS NP+S + S+ L L +L + L L+ +
Sbjct: 270 ITHCNLTA-VPYLAVRHLVYLRFLNLSYNPISTIEGSM-LHELLRLQEIQLVGGQLAVVE 327
Query: 255 ANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHL 291
F L+ L++S N L + + +LE L
Sbjct: 328 PYAFRGLNYLRVLNVSGNQLTTLEESAFHSVGNLETL 364
Score = 157 (60.3 bits), Expect = 7.0e-08, Sum P(2) = 7.0e-08
Identities = 72/295 (24%), Positives = 121/295 (41%)
Query: 193 LDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSR 252
LDL +K L++D F + L L L+ N +SA + A L L L LR+ L
Sbjct: 76 LDLGKNRIK-TLNQDEFASFPHLEELELNENIVSAVEPG-AFNNLFNLRTLGLRSNRLKL 133
Query: 253 LPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSL 312
+P F + L +LDIS N ++ + L +L+ L++G ++L IS F + SL
Sbjct: 134 IPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSL 193
Query: 313 KTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNP 372
+ L L L ++ + +L L VL L + + + + F Y L+ L +S P
Sbjct: 194 EQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYR---LKVLEISHWP 250
Query: 373 LHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTYPDLEELRLSGNPLHVL 432
Y + I + + + ++ V H Y L L LS NP+ +
Sbjct: 251 YLDTMTPNCLYGLNLTSLSI-THCNLTAVPYL---AVRHLVY----LRFLNLSYNPISTI 302
Query: 433 PTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSF 487
G+ ++ + P F + LN++ N L+ E +F
Sbjct: 303 E-GSMLHELLRLQEIQLVGG-QLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESAF 355
Score = 48 (22.0 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 25/105 (23%), Positives = 41/105 (39%)
Query: 520 ITSIKLVGNPWKCDCNIADMWEWATREKGDIGVLVGSTTPTEIGFGASRKKKGLVC---Y 576
+ ++ L NP CDC + +W + R + + + E G K V Y
Sbjct: 361 LETLILDSNPLACDCRL--LWVFRRRWRLNFNRQQPTCATPEFVQGKEFKDFPDVLLPNY 418
Query: 577 FDIFTTPTRKRPGRELFASTNKTWARYVKEADC--PSSKLFRPPR 619
F R R +++F T ++V AD P + L+ PR
Sbjct: 419 FTCRRARIRDRKAQQVFVDEGHT-VQFVCRADGDPPPAILWLSPR 462
>MGI|MGI:2669796 [details] [associations]
symbol:Rtn4rl2 "reticulon 4 receptor-like 2" species:10090
"Mus musculus" [GO:0004872 "receptor activity" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0009897 "external
side of plasma membrane" evidence=ISO] [GO:0009986 "cell surface"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0031103
"axon regeneration" evidence=TAS] [GO:0031225 "anchored to
membrane" evidence=IEA] [GO:0045121 "membrane raft" evidence=ISO]
[GO:0046658 "anchored to plasma membrane" evidence=ISO]
MGI:MGI:2669796 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0004872
InterPro:IPR000372 SMART:SM00013 GO:GO:0046658 GO:GO:0031103
GeneTree:ENSGT00690000101803 HOGENOM:HOG000116109
HOVERGEN:HBG063707 CTD:349667 KO:K16661 EMBL:AY250220 EMBL:BC132523
EMBL:BC138154 EMBL:AK142743 EMBL:BK001303 IPI:IPI00356283
RefSeq:NP_954693.1 UniGene:Mm.389289 UniGene:Mm.86447
ProteinModelPortal:Q7M6Z0 SMR:Q7M6Z0 PhosphoSite:Q7M6Z0
PRIDE:Q7M6Z0 Ensembl:ENSMUST00000054514 GeneID:269295
KEGG:mmu:269295 InParanoid:A2RTJ0 NextBio:392775 Bgee:Q7M6Z0
CleanEx:MM_RTN4RL2 Genevestigator:Q7M6Z0
GermOnline:ENSMUSG00000050896 Uniprot:Q7M6Z0
Length = 420
Score = 181 (68.8 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 65/206 (31%), Positives = 95/206 (46%)
Query: 68 KLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSH 127
+L L N +R + PG F P +L N NL+ I P F +L L+ L+L N+
Sbjct: 64 RLFLQNNLIRSLRPGTFGPNLLTLWLFSN--NLSTIHPGTFRHLQALEELDLGDNRHLRS 121
Query: 128 IDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNL 187
++ G L +L +L L + +S+LP N+F L+ L L EN L+ L L +L
Sbjct: 122 LEPDTFQG-LERLQSLHLYRCQLSSLPGNIFRGLVSLQYLYLQENSLLHLQ--DDLFADL 178
Query: 188 VHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRN 247
+L L L L+ L+E F L L L GN L + A L++L L L N
Sbjct: 179 ANLSHLFLHGNRLR-LLTEHVFRGLGSLDRLLLHGNRLQGVHRA-AFHGLSRLTILYLFN 236
Query: 248 CGLSRLPANTFHRFTCLQELDISHNP 273
L+ LP L+ L ++ NP
Sbjct: 237 NSLASLPGEALADLPALEFLRLNANP 262
Score = 171 (65.3 bits), Expect = 1.7e-15, Sum P(2) = 1.7e-15
Identities = 64/204 (31%), Positives = 90/204 (44%)
Query: 171 ENELIDLDVATTLGQNLVHL--DSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAA 228
+N LI T G NL+ L S +LS H P F + L L L N +
Sbjct: 68 QNNLIRSLRPGTFGPNLLTLWLFSNNLSTIH---P---GTFRHLQALEELDLGDNRHLRS 121
Query: 229 DLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESL 288
+ L +L L L C LS LP N F LQ L + N L+ L + L +L
Sbjct: 122 LEPDTFQGLERLQSLHLYRCQLSSLPGNIFRGLVSLQYLYLQENSLLHLQDDLFADLANL 181
Query: 289 EHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTR 348
HL + + L+ ++ F + SL L+L GN+L+ + F L+ L++L L N L
Sbjct: 182 SHLFLHGNRLRLLTEHVFRGLGSLDRLLLHGNRLQGVHRAAFHGLSRLTILYLFNNSLAS 241
Query: 349 LNETVFHENYTYPDLEELRLSGNP 372
L + P LE LRL+ NP
Sbjct: 242 LPGEALAD---LPALEFLRLNANP 262
Score = 154 (59.3 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 68/210 (32%), Positives = 94/210 (44%)
Query: 17 PGLITINLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNP 75
P + L N I+ + G F +LL L++ LS I+P F +L L +LDL N
Sbjct: 60 PSTQRLFLQNNLIRSLRPGTF--GPNLLTLWLFSNNLSTIHPGTFRHLQALEELDLGDNR 117
Query: 76 -LRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVL 134
LR +EP F L L+ L L RC L+ + + F L L+ L L +N L H+ L
Sbjct: 118 HLRSLEPDTFQGLERLQSLHLYRCQLSSLPGNIFRGLVSLQYLYLQENSLL-HLQDDL-F 175
Query: 135 GNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLD 194
+L L L L + + L ++VF L L L N L + A G L L L
Sbjct: 176 ADLANLSHLFLHGNRLRLLTEHVFRGLGSLDRLLLHGNRLQGVHRAAFHG--LSRLTILY 233
Query: 195 LSNCHLKGPLSEDAFVNATKLRTLYLSGNP 224
L N L L +A + L L L+ NP
Sbjct: 234 LFNNSLAS-LPGEALADLPALEFLRLNANP 262
Score = 116 (45.9 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 59/204 (28%), Positives = 86/204 (42%)
Query: 233 ALKPLT---KLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTA-LLSPLESL 288
+L+P T L L L + LS + TF L+ELD+ N + + LE L
Sbjct: 74 SLRPGTFGPNLLTLWLFSNNLSTIHPGTFRHLQALEELDLGDNRHLRSLEPDTFQGLERL 133
Query: 289 EHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTR 348
+ L + L + + F + SL+ L L N L L+ LF +L +LS L L+ L
Sbjct: 134 QSLHLYRCQLSSLPGNIFRGLVSLQYLYLQENSLLHLQDDLFADLANLSHLFLHGNRLRL 193
Query: 349 LNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNET 408
L E VF L+ L L GN L + + + L IL++ N +
Sbjct: 194 LTEHVFRG---LGSLDRLLLHGNRL------------QGVHRAAFHGLSRLTILYLFNNS 238
Query: 409 VFH---ENYT-YPDLEELRLSGNP 428
+ E P LE LRL+ NP
Sbjct: 239 LASLPGEALADLPALEFLRLNANP 262
Score = 101 (40.6 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 32/110 (29%), Positives = 45/110 (40%)
Query: 519 AITSIKLVGNPWKCDCNIADMWEWATREKGDIGVLVGSTTPTEIGFGASRKKKGLV-CYF 577
A+ ++L NPW CDC +W W R + + +T P G R + L F
Sbjct: 252 ALEFLRLNANPWACDCRARPLWAWFQRARVSSSDVTCATPPERQG----RDLRALRDSDF 307
Query: 578 DIFTTPTRKRPGRELFASTNKTWARYVKEADCPS---SKLFRP-PRTNSR 623
PT RPG +++ V EA P S L+R P +SR
Sbjct: 308 QACPPPTPTRPGSRARGNSSSNHLYGVAEAGAPPADPSTLYRDLPAEDSR 357
>UNIPROTKB|F1S5B4 [details] [associations]
symbol:LGR6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016500 "protein-hormone receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR002131 PRINTS:PR00373
PROSITE:PS51450 GO:GO:0016021 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 SMART:SM00013 GO:GO:0016500
GeneTree:ENSGT00650000092962 CTD:59352 KO:K08399 OMA:AYGKAPS
EMBL:CU929522 EMBL:FP565468 RefSeq:XP_003130662.2
Ensembl:ENSSSCT00000011954 GeneID:100511400 KEGG:ssc:100511400
Uniprot:F1S5B4
Length = 967
Score = 240 (89.5 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 82/334 (24%), Positives = 159/334 (47%)
Query: 17 PGLITINLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNP 75
P L ++ L+AN I V +G+F +L +L++ + L+++ ++L L + L+ N
Sbjct: 137 PSLQSLRLDANLISLVPDGSFEGLPALRHLWLDDNALTEVPVGALSSLPALQAMTLALNR 196
Query: 76 LRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLG 135
+ + F L+SL L L+ + ++ +F+ L+ L+TL+L+ N+L+ ++ + +
Sbjct: 197 ISHVPDYAFQNLSSLVVLHLHNNRIQHLGAHSFEGLHSLETLDLNHNELQ---EFPVAIR 253
Query: 136 NLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDL 195
LG+L L + I +P+ F N L+ ++ +N + V + ++L L +L L
Sbjct: 254 TLGRLQELGFHNNNIQTIPEKAFLGNPLLQTIHFYDNPI--QFVGRSAFRHLPRLHTLSL 311
Query: 196 SNCHLKGPLSE-DAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLP 254
+ + E T L L L+ L + + L +L L L + + LP
Sbjct: 312 NGA---SDIQEFPDLKGTTSLEILTLTRAGLQRLPPGMC-QQLPRLQVLELSHNQIQGLP 367
Query: 255 ANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKT 314
+ HR L+++ + HN + + S L SL+ LD+ ++ ++ I F + +L
Sbjct: 368 S--LHRCQKLEKIGLQHNRIWEIGADTFSQLTSLQALDLSWNAIRSIHPEAFATLRALVK 425
Query: 315 LILSGNKLETLESGLFQNLTHLSVLELNNCGLTR 348
L L+ N+L L L HL + N GL++
Sbjct: 426 LDLTHNQLTMLPLAGLGGLVHLKLK--GNLGLSQ 457
Score = 228 (85.3 bits), Expect = 3.5e-15, P = 3.5e-15
Identities = 114/382 (29%), Positives = 167/382 (43%)
Query: 69 LDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHI 128
LDLS N L ++PG+F L+ LE L L+ +L++I AF L LK L L N+L I
Sbjct: 70 LDLSMNNLTELQPGLFRHLSFLEELRLSGNHLSHIPGQAFSGLYSLKILMLQNNQLGG-I 128
Query: 129 DWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLV 188
L L L +L L + IS +PD F LR+L L +N L ++ V +L
Sbjct: 129 P-AEALWELPSLQSLRLDANLISLVPDGSFEGLPALRHLWLDDNALTEVPVGAL--SSLP 185
Query: 189 HLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNC 248
L ++ L+ + + + AF N + L L+L N + + + L L L L +
Sbjct: 186 ALQAMTLALNRISH-VPDYAFQNLSSLVVLHLHNNRIQHLGAH-SFEGLHSLETLDLNHN 243
Query: 249 GLSRLPANTFHRFTCLQELDISHNPL--IDAFTALLSPLESLEHLDMGYSN-LQRISRST 305
L P LQEL +N + I L +PL H Y N +Q + RS
Sbjct: 244 ELQEFPV-AIRTLGRLQELGFHNNNIQTIPEKAFLGNPLLQTIHF---YDNPIQFVGRSA 299
Query: 306 FLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEE 365
F + L TL L+G + E + T L +L L GL RL + + P L+
Sbjct: 300 FRHLPRLHTLSLNGAS-DIQEFPDLKGTTSLEILTLTRAGLQRLPPGMCQQ---LPRLQV 355
Query: 366 LRLSGNPLHVLPDSTKQYSMRTIPTQ---IWK----NFDFLVILFILN------ETVFHE 412
L LS N + LP + + I Q IW+ F L L L+ ++ E
Sbjct: 356 LELSHNQIQGLPSLHRCQKLEKIGLQHNRIWEIGADTFSQLTSLQALDLSWNAIRSIHPE 415
Query: 413 NY-TYPDLEELRLSGNPLHVLP 433
+ T L +L L+ N L +LP
Sbjct: 416 AFATLRALVKLDLTHNQLTMLP 437
Score = 214 (80.4 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 91/303 (30%), Positives = 135/303 (44%)
Query: 44 YLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYI 103
YL + L+++ P F +L+ L +L LSGN L I F L SL+ LML L I
Sbjct: 69 YLDLSMNNLTELQPGLFRHLSFLEELRLSGNHLSHIPGQAFSGLYSLKILMLQNNQLGGI 128
Query: 104 SPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTW 163
A L L++L L N + D + L L L L + ++ +P ++
Sbjct: 129 PAEALWELPSLQSLRLDANLISLVPDGSFE--GLPALRHLWLDDNALTEVPVGALSSLPA 186
Query: 164 LRNLNLAENELIDL-DVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSG 222
L+ + LA N + + D A QNL L L L N ++ L +F L TL L+
Sbjct: 187 LQAMTLALNRISHVPDYAF---QNLSSLVVLHLHNNRIQH-LGAHSFEGLHSLETLDLNH 242
Query: 223 NPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALL 282
N L + VA++ L +L L N + +P F LQ + NP+ +
Sbjct: 243 NELQ--EFPVAIRTLGRLQELGFHNNNIQTIPEKAFLGNPLLQTIHFYDNPIQFVGRSAF 300
Query: 283 SPLESLEHLDM-GYSNLQRISRSTFLK-MTSLKTLILSGNKLETLESGLFQNLTHLSVLE 340
L L L + G S++Q LK TSL+ L L+ L+ L G+ Q L L VLE
Sbjct: 301 RHLPRLHTLSLNGASDIQEFPD---LKGTTSLEILTLTRAGLQRLPPGMCQQLPRLQVLE 357
Query: 341 LNN 343
L++
Sbjct: 358 LSH 360
Score = 168 (64.2 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 67/246 (27%), Positives = 106/246 (43%)
Query: 138 GKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSN 197
G + + D + G+S +P ++ +L +L+ N L +L L ++L L+ L LS
Sbjct: 44 GFMLSADCSERGLSAVPGDLHPLTAYL---DLSMNNLTELQPG--LFRHLSFLEELRLSG 98
Query: 198 CHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANT 257
HL + AF L+ L L N L AL L L L L +S +P +
Sbjct: 99 NHLSH-IPGQAFSGLYSLKILMLQNNQLGGIPAE-ALWELPSLQSLRLDANLISLVPDGS 156
Query: 258 FHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLIL 317
F L+ L + N L + LS L +L+ + + + + + F ++SL L L
Sbjct: 157 FEGLPALRHLWLDDNALTEVPVGALSSLPALQAMTLALNRISHVPDYAFQNLSSLVVLHL 216
Query: 318 SGNKLETLESGLFQNLTHLSVLELNNCGLT----------RLNETVFHENYTYPDLEELR 367
N+++ L + F+ L L L+LN+ L RL E FH N + E
Sbjct: 217 HNNRIQHLGAHSFEGLHSLETLDLNHNELQEFPVAIRTLGRLQELGFHNN-NIQTIPEKA 275
Query: 368 LSGNPL 373
GNPL
Sbjct: 276 FLGNPL 281
>UNIPROTKB|P02750 [details] [associations]
symbol:LRG1 "Leucine-rich alpha-2-glycoprotein"
species:9606 "Homo sapiens" [GO:0050873 "brown fat cell
differentiation" evidence=IEA] [GO:0016020 "membrane" evidence=NAS]
[GO:0005576 "extracellular region" evidence=NAS] [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0005615 "extracellular space" evidence=IDA]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005615
GO:GO:0016020 EMBL:AF403428 EMBL:BC034389 EMBL:BC070198
IPI:IPI00022417 PIR:A03211 RefSeq:NP_443204.1 UniGene:Hs.655559
ProteinModelPortal:P02750 SMR:P02750 STRING:P02750
PhosphoSite:P02750 DMDM:23503037 DOSAC-COBS-2DPAGE:P02750
SWISS-2DPAGE:P02750 PaxDb:P02750 PeptideAtlas:P02750 PRIDE:P02750
DNASU:116844 Ensembl:ENST00000306390 GeneID:116844 KEGG:hsa:116844
UCSC:uc002mau.3 CTD:116844 GeneCards:GC19M004538 HGNC:HGNC:29480
HPA:HPA001888 HPA:HPA001889 MIM:611289 neXtProt:NX_P02750
PharmGKB:PA134919634 eggNOG:COG4886 HOGENOM:HOG000234378
HOVERGEN:HBG000045 InParanoid:P02750 OMA:RCAGPEA OrthoDB:EOG4TMR2P
PhylomeDB:P02750 GenomeRNAi:116844 NextBio:80020
ArrayExpress:P02750 Bgee:P02750 CleanEx:HS_LRG1
Genevestigator:P02750 GermOnline:ENSG00000171236 GO:GO:0050873
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
Uniprot:P02750
Length = 347
Score = 200 (75.5 bits), Expect = 1.8e-16, Sum P(2) = 1.8e-16
Identities = 75/238 (31%), Positives = 113/238 (47%)
Query: 141 DTLDLRQS--GISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNC 198
DT+ L +++LP N+ + L+ L+L+ N L L + + + L LDL+
Sbjct: 69 DTVHLAVEFFNLTHLPANLLQGASKLQELHLSSNGLESL--SPEFLRPVPQLRVLDLTRN 126
Query: 199 HLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTF 258
L G L F + L TL L N L ++S L L L L L L +LP
Sbjct: 127 ALTG-LPPGLFQASATLDTLVLKENQLEVLEVSW-LHGLKALGHLDLSGNRLRKLPPGLL 184
Query: 259 HRFTCLQELDISHNPLIDAFTALL-SPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLIL 317
FT L+ LD+ N L LL PL+ LE L + + LQ + + L L+ L L
Sbjct: 185 ANFTLLRTLDLGENQLETLPPDLLRGPLQ-LERLHLEGNKLQVLGKDLLLPQPDLRYLFL 243
Query: 318 SGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYP--DLEE-LRLSGNP 372
+GNKL + +G FQ L L +L+L+N L + E ++ + P D+ + +SGNP
Sbjct: 244 NGNKLARVAAGAFQGLRQLDMLDLSNNSLASVPEGLW-ASLGQPNWDMRDGFDISGNP 300
Score = 200 (75.5 bits), Expect = 1.8e-16, Sum P(2) = 1.8e-16
Identities = 78/263 (29%), Positives = 118/263 (44%)
Query: 23 NLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPG 82
+++ P + G +L A ++ +L ++ L+ + + L +L LS N L + P
Sbjct: 53 SISCQPPAEIPG-YLPADTV-HLAVEFFNLTHLPANLLQGASKLQELHLSSNGLESLSPE 110
Query: 83 VFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKS-HIDWTLVLGNLGKLD 141
P+ L L L R LT + P F L TL L +N+L+ + W L L L
Sbjct: 111 FLRPVPQLRVLDLTRNALTGLPPGLFQASATLDTLVLKENQLEVLEVSW---LHGLKALG 167
Query: 142 TLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLK 201
LDL + + LP + AN T LR L+L EN+L TL +L+ L L HL+
Sbjct: 168 HLDLSGNRLRKLPPGLLANFTLLRTLDLGENQL------ETLPPDLLR-GPLQLERLHLE 220
Query: 202 GP----LSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANT 257
G L +D + LR L+L+GN L+ A + L +L L L N L+ +P
Sbjct: 221 GNKLQVLGKDLLLPQPDLRYLFLNGNKLARVAAG-AFQGLRQLDMLDLSNNSLASVPEGL 279
Query: 258 FH-----RFTCLQELDISHNPLI 275
+ + DIS NP I
Sbjct: 280 WASLGQPNWDMRDGFDISGNPWI 302
Score = 115 (45.5 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 41/151 (27%), Positives = 68/151 (45%)
Query: 22 INLNANPIQPVEGAFLVARSLLY-LYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIE 80
++L+ N ++ + L +LL L + E L + P L +L L GN L+++
Sbjct: 169 LDLSGNRLRKLPPGLLANFTLLRTLDLGENQLETLPPDLLRGPLQLERLHLEGNKLQVLG 228
Query: 81 PGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKL 140
+ P L YL LN L ++ AF L L L+LS N L S + + +LG+
Sbjct: 229 KDLLLPQPDLRYLFLNGNKLARVAAGAFQGLRQLDMLDLSNNSLASVPEG--LWASLGQ- 285
Query: 141 DTLDLRQSGISNLPDNVFANNTWLRNLNLAE 171
D+R G + N W+ + NL++
Sbjct: 286 PNWDMRD-GFD------ISGNPWICDQNLSD 309
Score = 111 (44.1 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 59/217 (27%), Positives = 88/217 (40%)
Query: 284 PLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNN 343
P +++ HL + + NL + + + L+ L LS N LE+L + + L VL+L
Sbjct: 67 PADTV-HLAVEFFNLTHLPANLLQGASKLQELHLSSNGLESLSPEFLRPVPQLRVLDLTR 125
Query: 344 CGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDS----TKQYS--------MRTIPTQ 391
LT L +F + T L+ L L N L VL S K +R +P
Sbjct: 126 NALTGLPPGLFQASAT---LDTLVLKENQLEVLEVSWLHGLKALGHLDLSGNRLRKLPPG 182
Query: 392 IWKNFDFLVILFILN---ETVFHENYTYP-DLEELRLSGNPLHVLPTGNXXXXXXXXXXX 447
+ NF L L + ET+ + P LE L L GN L VL G
Sbjct: 183 LLANFTLLRTLDLGENQLETLPPDLLRGPLQLERLHLEGNKLQVL--GKDLLLPQPDLRY 240
Query: 448 XXXXXCKIDYLPPNVFNNTRNITSLNLANNNLSMTSE 484
K+ + F R + L+L+NN+L+ E
Sbjct: 241 LFLNGNKLARVAAGAFQGLRQLDMLDLSNNSLASVPE 277
Score = 73 (30.8 bits), Expect = 1.8e-16, Sum P(2) = 1.8e-16
Identities = 10/21 (47%), Positives = 15/21 (71%)
Query: 527 GNPWKCDCNIADMWEWATREK 547
GNPW CD N++D++ W +K
Sbjct: 298 GNPWICDQNLSDLYRWLQAQK 318
>MGI|MGI:1915522 [details] [associations]
symbol:Lingo1 "leucine rich repeat and Ig domain containing
1" species:10090 "Mus musculus" [GO:0005154 "epidermal growth
factor receptor binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0021954 "central nervous system neuron
development" evidence=IMP;IDA] [GO:0031175 "neuron projection
development" evidence=IDA] [GO:0043491 "protein kinase B signaling
cascade" evidence=IDA] [GO:0048715 "negative regulation of
oligodendrocyte differentiation" evidence=IMP] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:1915522 GO:GO:0016021 GO:GO:0005886
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0043491 GO:GO:0031175
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GO:GO:0021954 HSSP:P21809 GO:GO:0048715
GeneTree:ENSGT00690000101682 HOGENOM:HOG000246971 OrthoDB:EOG40S0F8
CTD:84894 HOVERGEN:HBG057546 EMBL:AK027262 EMBL:AK163538
EMBL:BC052384 EMBL:BC065696 EMBL:AY324324 IPI:IPI00134200
RefSeq:NP_851419.1 UniGene:Mm.246605 ProteinModelPortal:Q9D1T0
SMR:Q9D1T0 IntAct:Q9D1T0 STRING:Q9D1T0 PhosphoSite:Q9D1T0
PaxDb:Q9D1T0 PRIDE:Q9D1T0 Ensembl:ENSMUST00000053568
Ensembl:ENSMUST00000114247 GeneID:235402 KEGG:mmu:235402
InParanoid:Q9D1T0 ChiTaRS:LINGO1 NextBio:382644 Bgee:Q9D1T0
Genevestigator:Q9D1T0 Uniprot:Q9D1T0
Length = 614
Score = 235 (87.8 bits), Expect = 1.9e-16, Sum P(2) = 1.9e-16
Identities = 89/311 (28%), Positives = 144/311 (46%)
Query: 64 TTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNK 123
T LDL N ++ + F LE L LN ++ + P AF+NL +L+TL L N+
Sbjct: 65 TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNR 124
Query: 124 LKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTL 183
LK I + G L L LD+ ++ I L D +F + L++L + +N+L+ +
Sbjct: 125 LKL-IPLGVFTG-LSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFS 182
Query: 184 GQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRL 243
G N L+ L L C+L + +A + L L L ++A + K L +L L
Sbjct: 183 GLN--SLEQLTLEKCNLTS-IPTEALSHLHGLIVLRLRHLNINAIR-DYSFKRLYRLKVL 238
Query: 244 SLRNCG-LSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRIS 302
+ + L + N + L L I+H L + L L L++ Y+ + I
Sbjct: 239 EISHWPYLDTMTPNCLYGLN-LTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIGTIE 297
Query: 303 RSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPD 362
S ++ L+ + L G +L +E F+ L +L VL ++ LT L E+ FH + +
Sbjct: 298 GSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESAFH---SVGN 354
Query: 363 LEELRLSGNPL 373
LE L L NPL
Sbjct: 355 LETLILDSNPL 365
Score = 214 (80.4 bits), Expect = 3.9e-14, Sum P(2) = 3.9e-14
Identities = 74/294 (25%), Positives = 135/294 (45%)
Query: 52 LSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNL 111
+ +N F + L +L+L+ N + +EPG F+ L +L L L L I F L
Sbjct: 77 IKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGL 136
Query: 112 NHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAE 171
++L L++S+NK+ +D+ + +L L +L++ + + + F+ L L L +
Sbjct: 137 SNLTKLDISENKIVILLDY--MFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEK 194
Query: 172 NELIDLDVATTLGQNLVHLDSLDLSNC-HLK-GPLSEDAFVNATKLRTLYLSGNPLSAAD 229
L + + L HL L + HL + + +F +L+ L +S P
Sbjct: 195 CNLTSIPT-----EALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTM 249
Query: 230 LSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLE 289
L L L LS+ +C L+ +P L+ L++S+NP+ ++L L L+
Sbjct: 250 TPNCLYGLN-LTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIGTIEGSMLHELLRLQ 308
Query: 290 HLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNN 343
+ + L + F + L+ L +SGN+L TLE F ++ +L L L++
Sbjct: 309 EIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESAFHSVGNLETLILDS 362
Score = 200 (75.5 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 86/277 (31%), Positives = 128/277 (46%)
Query: 17 PGLITINLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNP 75
P L + LN N + VE GAF +L L ++ L I FT L+ L KLD+S N
Sbjct: 89 PHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENK 148
Query: 76 LRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLG 135
+ I+ +F L +L+ L + +L YIS AF LN L+ L L + L S I T L
Sbjct: 149 IVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTS-IP-TEALS 206
Query: 136 NLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTL-GQNLVHLDSLD 194
+L L L LR I+ + D F L+ L ++ +D L G NL SL
Sbjct: 207 HLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLT---SLS 263
Query: 195 LSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLP 254
+++C+L + A + LR L LS NP+ + S+ L L +L + L L+ +
Sbjct: 264 ITHCNLTA-VPYLAVRHLVYLRFLNLSYNPIGTIEGSM-LHELLRLQEIQLVGGQLAVVE 321
Query: 255 ANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHL 291
F L+ L++S N L + + +LE L
Sbjct: 322 PYAFRGLNYLRVLNVSGNQLTTLEESAFHSVGNLETL 358
Score = 156 (60.0 bits), Expect = 8.7e-08, Sum P(2) = 8.7e-08
Identities = 72/295 (24%), Positives = 121/295 (41%)
Query: 193 LDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSR 252
LDL +K L++D F + L L L+ N +SA + A L L L LR+ L
Sbjct: 70 LDLGKNRIK-TLNQDEFASFPHLEELELNENIVSAVEPG-AFNNLFNLRTLGLRSNRLKL 127
Query: 253 LPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSL 312
+P F + L +LDIS N ++ + L +L+ L++G ++L IS F + SL
Sbjct: 128 IPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSL 187
Query: 313 KTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNP 372
+ L L L ++ + +L L VL L + + + + F Y L+ L +S P
Sbjct: 188 EQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYR---LKVLEISHWP 244
Query: 373 LHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTYPDLEELRLSGNPLHVL 432
Y + I + + + ++ V H Y L L LS NP+ +
Sbjct: 245 YLDTMTPNCLYGLNLTSLSI-THCNLTAVPYL---AVRHLVY----LRFLNLSYNPIGTI 296
Query: 433 PTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSF 487
G+ ++ + P F + LN++ N L+ E +F
Sbjct: 297 E-GSMLHELLRLQEIQLVGG-QLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESAF 349
Score = 48 (22.0 bits), Expect = 1.9e-16, Sum P(2) = 1.9e-16
Identities = 25/105 (23%), Positives = 41/105 (39%)
Query: 520 ITSIKLVGNPWKCDCNIADMWEWATREKGDIGVLVGSTTPTEIGFGASRKKKGLVC---Y 576
+ ++ L NP CDC + +W + R + + + E G K V Y
Sbjct: 355 LETLILDSNPLACDCRL--LWVFRRRWRLNFNRQQPTCATPEFVQGKEFKDFPDVLLPNY 412
Query: 577 FDIFTTPTRKRPGRELFASTNKTWARYVKEADC--PSSKLFRPPR 619
F R R +++F T ++V AD P + L+ PR
Sbjct: 413 FTCRRAHIRDRKAQQVFVDEGHT-VQFVCRADGDPPPAILWLSPR 456
>UNIPROTKB|F1PGX0 [details] [associations]
symbol:LINGO1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048715 "negative regulation of
oligodendrocyte differentiation" evidence=IEA] [GO:0043491 "protein
kinase B signaling cascade" evidence=IEA] [GO:0031175 "neuron
projection development" evidence=IEA] [GO:0021954 "central nervous
system neuron development" evidence=IEA] [GO:0005154 "epidermal
growth factor receptor binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0043491
GO:GO:0031175 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GO:GO:0021954 GO:GO:0048715
GeneTree:ENSGT00690000101682 OMA:RIRDRKP EMBL:AAEX03016347
ProteinModelPortal:F1PGX0 Ensembl:ENSCAFT00000028688 Uniprot:F1PGX0
Length = 620
Score = 235 (87.8 bits), Expect = 1.9e-16, Sum P(2) = 1.9e-16
Identities = 89/311 (28%), Positives = 143/311 (45%)
Query: 64 TTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNK 123
T LDL N ++ + F LE L LN ++ + P AF+NL L+TL L N+
Sbjct: 71 TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFSLRTLGLRSNR 130
Query: 124 LKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTL 183
LK I + G L L LD+ ++ I L D +F + L++L + +N+L+ +
Sbjct: 131 LKL-IPLGVFTG-LSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFS 188
Query: 184 GQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRL 243
G N L+ L L C+L + +A + L L L ++A + K L +L L
Sbjct: 189 GLN--SLEQLTLEKCNLTS-IPTEALSHLHSLIVLRLRHLNINAIR-DYSFKRLYRLKVL 244
Query: 244 SLRNCG-LSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRIS 302
+ + L + N + L L I+H L + L L L++ Y+ + I
Sbjct: 245 EISHWPYLDTMTPNCLYGLN-LTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIGTIE 303
Query: 303 RSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPD 362
S ++ L+ + L G +L +E F+ L +L VL ++ LT L E+ FH + +
Sbjct: 304 GSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESAFH---SVGN 360
Query: 363 LEELRLSGNPL 373
LE L L NPL
Sbjct: 361 LETLILDSNPL 371
Score = 221 (82.9 bits), Expect = 6.9e-15, Sum P(2) = 6.9e-15
Identities = 76/294 (25%), Positives = 136/294 (46%)
Query: 52 LSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNL 111
+ +N F + L +L+L+ N + +EPG F+ L SL L L L I F L
Sbjct: 83 IKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFSLRTLGLRSNRLKLIPLGVFTGL 142
Query: 112 NHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAE 171
++L L++S+NK+ +D+ + +L L +L++ + + + F+ L L L +
Sbjct: 143 SNLTKLDISENKIVILLDY--MFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEK 200
Query: 172 NELIDLDVATTLGQNLVHLDSLDLSNC-HLK-GPLSEDAFVNATKLRTLYLSGNPLSAAD 229
L + + L HL SL + HL + + +F +L+ L +S P
Sbjct: 201 CNLTSIPT-----EALSHLHSLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTM 255
Query: 230 LSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLE 289
L L L LS+ +C L+ +P L+ L++S+NP+ ++L L L+
Sbjct: 256 TPNCLYGLN-LTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIGTIEGSMLHELLRLQ 314
Query: 290 HLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNN 343
+ + L + F + L+ L +SGN+L TLE F ++ +L L L++
Sbjct: 315 EIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESAFHSVGNLETLILDS 368
Score = 205 (77.2 bits), Expect = 4.0e-13, Sum P(2) = 4.0e-13
Identities = 87/277 (31%), Positives = 128/277 (46%)
Query: 17 PGLITINLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNP 75
P L + LN N + VE GAF SL L ++ L I FT L+ L KLD+S N
Sbjct: 95 PHLEELELNENIVSAVEPGAFNNLFSLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENK 154
Query: 76 LRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLG 135
+ I+ +F L +L+ L + +L YIS AF LN L+ L L + L S I T L
Sbjct: 155 IVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTS-IP-TEALS 212
Query: 136 NLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTL-GQNLVHLDSLD 194
+L L L LR I+ + D F L+ L ++ +D L G NL SL
Sbjct: 213 HLHSLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLT---SLS 269
Query: 195 LSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLP 254
+++C+L + A + LR L LS NP+ + S+ L L +L + L L+ +
Sbjct: 270 ITHCNLTA-VPYLAVRHLVYLRFLNLSYNPIGTIEGSM-LHELLRLQEIQLVGGQLAVVE 327
Query: 255 ANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHL 291
F L+ L++S N L + + +LE L
Sbjct: 328 PYAFRGLNYLRVLNVSGNQLTTLEESAFHSVGNLETL 364
Score = 157 (60.3 bits), Expect = 7.0e-08, Sum P(2) = 7.0e-08
Identities = 72/295 (24%), Positives = 121/295 (41%)
Query: 193 LDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSR 252
LDL +K L++D F + L L L+ N +SA + A L L L LR+ L
Sbjct: 76 LDLGKNRIK-TLNQDEFASFPHLEELELNENIVSAVEPG-AFNNLFSLRTLGLRSNRLKL 133
Query: 253 LPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSL 312
+P F + L +LDIS N ++ + L +L+ L++G ++L IS F + SL
Sbjct: 134 IPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSL 193
Query: 313 KTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNP 372
+ L L L ++ + +L L VL L + + + + F Y L+ L +S P
Sbjct: 194 EQLTLEKCNLTSIPTEALSHLHSLIVLRLRHLNINAIRDYSFKRLYR---LKVLEISHWP 250
Query: 373 LHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTYPDLEELRLSGNPLHVL 432
Y + I + + + ++ V H Y L L LS NP+ +
Sbjct: 251 YLDTMTPNCLYGLNLTSLSI-THCNLTAVPYL---AVRHLVY----LRFLNLSYNPIGTI 302
Query: 433 PTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSF 487
G+ ++ + P F + LN++ N L+ E +F
Sbjct: 303 E-GSMLHELLRLQEIQLVGG-QLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESAF 355
Score = 48 (22.0 bits), Expect = 1.9e-16, Sum P(2) = 1.9e-16
Identities = 25/105 (23%), Positives = 41/105 (39%)
Query: 520 ITSIKLVGNPWKCDCNIADMWEWATREKGDIGVLVGSTTPTEIGFGASRKKKGLVC---Y 576
+ ++ L NP CDC + +W + R + + + E G K V Y
Sbjct: 361 LETLILDSNPLACDCRL--LWVFRRRWRLNFNRQQPTCATPEFVQGKEFKDFPDVLLPNY 418
Query: 577 FDIFTTPTRKRPGRELFASTNKTWARYVKEADC--PSSKLFRPPR 619
F R R +++F T ++V AD P + L+ PR
Sbjct: 419 FTCRRARIRDRKAQQVFVDEGHT-VQFVCRADGDPPPAILWLSPR 462
>UNIPROTKB|G3V881 [details] [associations]
symbol:Lingo1 "Leucine rich repeat neuronal 6A, isoform
CRA_a" species:10116 "Rattus norvegicus" [GO:0005154 "epidermal
growth factor receptor binding" evidence=IEA] [GO:0021954 "central
nervous system neuron development" evidence=IEA] [GO:0031175
"neuron projection development" evidence=IEA] [GO:0043491 "protein
kinase B signaling cascade" evidence=IEA] [GO:0048715 "negative
regulation of oligodendrocyte differentiation" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 RGD:1308668 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 EMBL:CH473975
GeneTree:ENSGT00690000101682 CTD:84894 RefSeq:NP_001094192.1
UniGene:Rn.20269 ProteinModelPortal:G3V881 SMR:G3V881 PRIDE:G3V881
Ensembl:ENSRNOT00000023084 GeneID:315691 KEGG:rno:315691
NextBio:669664 Uniprot:G3V881
Length = 620
Score = 235 (87.8 bits), Expect = 1.9e-16, Sum P(2) = 1.9e-16
Identities = 89/311 (28%), Positives = 144/311 (46%)
Query: 64 TTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNK 123
T LDL N ++ + F LE L LN ++ + P AF+NL +L+TL L N+
Sbjct: 71 TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNR 130
Query: 124 LKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTL 183
LK I + G L L LD+ ++ I L D +F + L++L + +N+L+ +
Sbjct: 131 LKL-IPLGVFTG-LSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFS 188
Query: 184 GQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRL 243
G N L+ L L C+L + +A + L L L ++A + K L +L L
Sbjct: 189 GLN--SLEQLTLEKCNLTS-IPTEALSHLHGLIVLRLRHLNINAIR-DYSFKRLYRLKVL 244
Query: 244 SLRNCG-LSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRIS 302
+ + L + N + L L I+H L + L L L++ Y+ + I
Sbjct: 245 EISHWPYLDTMTPNCLYGLN-LTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIGTIE 303
Query: 303 RSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPD 362
S ++ L+ + L G +L +E F+ L +L VL ++ LT L E+ FH + +
Sbjct: 304 GSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESAFH---SVGN 360
Query: 363 LEELRLSGNPL 373
LE L L NPL
Sbjct: 361 LETLILDSNPL 371
Score = 214 (80.4 bits), Expect = 4.1e-14, Sum P(2) = 4.1e-14
Identities = 74/294 (25%), Positives = 135/294 (45%)
Query: 52 LSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNL 111
+ +N F + L +L+L+ N + +EPG F+ L +L L L L I F L
Sbjct: 83 IKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGL 142
Query: 112 NHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAE 171
++L L++S+NK+ +D+ + +L L +L++ + + + F+ L L L +
Sbjct: 143 SNLTKLDISENKIVILLDY--MFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEK 200
Query: 172 NELIDLDVATTLGQNLVHLDSLDLSNC-HLK-GPLSEDAFVNATKLRTLYLSGNPLSAAD 229
L + + L HL L + HL + + +F +L+ L +S P
Sbjct: 201 CNLTSIPT-----EALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTM 255
Query: 230 LSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLE 289
L L L LS+ +C L+ +P L+ L++S+NP+ ++L L L+
Sbjct: 256 TPNCLYGLN-LTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIGTIEGSMLHELLRLQ 314
Query: 290 HLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNN 343
+ + L + F + L+ L +SGN+L TLE F ++ +L L L++
Sbjct: 315 EIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESAFHSVGNLETLILDS 368
Score = 200 (75.5 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 86/277 (31%), Positives = 128/277 (46%)
Query: 17 PGLITINLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNP 75
P L + LN N + VE GAF +L L ++ L I FT L+ L KLD+S N
Sbjct: 95 PHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENK 154
Query: 76 LRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLG 135
+ I+ +F L +L+ L + +L YIS AF LN L+ L L + L S I T L
Sbjct: 155 IVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTS-IP-TEALS 212
Query: 136 NLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTL-GQNLVHLDSLD 194
+L L L LR I+ + D F L+ L ++ +D L G NL SL
Sbjct: 213 HLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLT---SLS 269
Query: 195 LSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLP 254
+++C+L + A + LR L LS NP+ + S+ L L +L + L L+ +
Sbjct: 270 ITHCNLTA-VPYLAVRHLVYLRFLNLSYNPIGTIEGSM-LHELLRLQEIQLVGGQLAVVE 327
Query: 255 ANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHL 291
F L+ L++S N L + + +LE L
Sbjct: 328 PYAFRGLNYLRVLNVSGNQLTTLEESAFHSVGNLETL 364
Score = 156 (60.0 bits), Expect = 8.9e-08, Sum P(2) = 8.9e-08
Identities = 72/295 (24%), Positives = 121/295 (41%)
Query: 193 LDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSR 252
LDL +K L++D F + L L L+ N +SA + A L L L LR+ L
Sbjct: 76 LDLGKNRIK-TLNQDEFASFPHLEELELNENIVSAVEPG-AFNNLFNLRTLGLRSNRLKL 133
Query: 253 LPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSL 312
+P F + L +LDIS N ++ + L +L+ L++G ++L IS F + SL
Sbjct: 134 IPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSL 193
Query: 313 KTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNP 372
+ L L L ++ + +L L VL L + + + + F Y L+ L +S P
Sbjct: 194 EQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYR---LKVLEISHWP 250
Query: 373 LHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTYPDLEELRLSGNPLHVL 432
Y + I + + + ++ V H Y L L LS NP+ +
Sbjct: 251 YLDTMTPNCLYGLNLTSLSI-THCNLTAVPYL---AVRHLVY----LRFLNLSYNPIGTI 302
Query: 433 PTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSF 487
G+ ++ + P F + LN++ N L+ E +F
Sbjct: 303 E-GSMLHELLRLQEIQLVGG-QLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESAF 355
Score = 48 (22.0 bits), Expect = 1.9e-16, Sum P(2) = 1.9e-16
Identities = 25/105 (23%), Positives = 41/105 (39%)
Query: 520 ITSIKLVGNPWKCDCNIADMWEWATREKGDIGVLVGSTTPTEIGFGASRKKKGLVC---Y 576
+ ++ L NP CDC + +W + R + + + E G K V Y
Sbjct: 361 LETLILDSNPLACDCRL--LWVFRRRWRLNFNRQQPTCATPEFVQGKEFKDFPDVLLPNY 418
Query: 577 FDIFTTPTRKRPGRELFASTNKTWARYVKEADC--PSSKLFRPPR 619
F R R +++F T ++V AD P + L+ PR
Sbjct: 419 FTCRRAHIRDRKAQQVFVDEGHT-VQFVCRADGDPPPAILWLSPR 462
>ZFIN|ZDB-GENE-050506-80 [details] [associations]
symbol:lrrtm1 "leucine rich repeat transmembrane
neuronal 1" species:7955 "Danio rerio" [GO:0005515 "protein
binding" evidence=IPI] [GO:0042802 "identical protein binding"
evidence=IDA] InterPro:IPR001611 PROSITE:PS51450
ZFIN:ZDB-GENE-050506-80 InterPro:IPR003591 SMART:SM00369
GO:GO:0042802 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00700000104056 EMBL:CU076051 CTD:347730
HOGENOM:HOG000290681 HOVERGEN:HBG052362 KO:K16665 OMA:EPDLFHG
IPI:IPI00493041 RefSeq:XP_003197743.1 UniGene:Dr.12811
ProteinModelPortal:B8JKM0 IntAct:B8JKM0 Ensembl:ENSDART00000133917
GeneID:570385 KEGG:dre:570385 NextBio:20890105 ArrayExpress:B8JKM0
Bgee:B8JKM0 Uniprot:B8JKM0
Length = 524
Score = 207 (77.9 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 89/312 (28%), Positives = 142/312 (45%)
Query: 17 PGLITINLN-ANPIQPVEGAF---LVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLS 72
PGLI +L I P+ G L LY + L+ I PQ NL++ L L
Sbjct: 20 PGLILCSLGIVLKIVPLVGGSCPRLCRCDNKQLYCEGLNLTDI-PQ---NLSSAIGLSLR 75
Query: 73 GNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTL 132
N + + G F L+ L +L L+ N+ + SAF+ L +K L+LS N+++S + T
Sbjct: 76 ENNISELREGNFVGLSQLTWLYLDHNNIEIVEESAFERLRRIKELDLSTNRIESLPNGTF 135
Query: 133 VLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDS 192
L L LDL + + +L ++F L NL+L N L + V + Q+ +
Sbjct: 136 --RPLPNLRILDLSYNRLQSLEPDLFHGLRKLTNLHLRYNALKFIPVR--IFQDCRSMQF 191
Query: 193 LDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSR 252
LDL L+ L+ ++F KL L+L N L +L+ L L L +RN +
Sbjct: 192 LDLGYNQLQS-LARNSFAGLFKLTELHLEHNELVKVNLA-HFPRLISLRTLYMRN-NKAT 248
Query: 253 LPANTFH-RFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTS 311
+ NT + L+++D S+N + + + L L + + L I + TS
Sbjct: 249 IVVNTLEWTWDYLEKIDFSNNEIEYIEPHVFESVPKLNTLMLDSNKLTYIDQRILDSWTS 308
Query: 312 LKTLILSGNKLE 323
L ++ LSGN E
Sbjct: 309 LSSITLSGNDWE 320
Score = 171 (65.3 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 75/299 (25%), Positives = 134/299 (44%)
Query: 132 LVLGNLGKLDTLDLRQ---SGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLV 188
LV G+ +L D +Q G+ NL D + N + L+L EN + +L +G + +
Sbjct: 36 LVGGSCPRLCRCDNKQLYCEGL-NLTD-IPQNLSSAIGLSLRENNISELREGNFVGLSQL 93
Query: 189 HLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNC 248
LD +N + + E AF +++ L LS N + + + +PL L L L
Sbjct: 94 TWLYLDHNNIEI---VEESAFERLRRIKELDLSTNRIESLP-NGTFRPLPNLRILDLSYN 149
Query: 249 GLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLK 308
L L + FH L L + +N L + S++ LD+GY+ LQ ++R++F
Sbjct: 150 RLQSLEPDLFHGLRKLTNLHLRYNALKFIPVRIFQDCRSMQFLDLGYNQLQSLARNSFAG 209
Query: 309 MTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRL 368
+ L L L N+L + F L L L + N T + T+ +T+ LE++
Sbjct: 210 LFKLTELHLEHNELVKVNLAHFPRLISLRTLYMRNNKATIVVNTL---EWTWDYLEKIDF 266
Query: 369 SGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTYPDLEELRLSGN 427
S N + + + + ++P D + +I ++ + +++T L + LSGN
Sbjct: 267 SNNEIEYI----EPHVFESVPKLNTLMLDSNKLTYI-DQRIL-DSWT--SLSSITLSGN 317
Score = 113 (44.8 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 47/209 (22%), Positives = 91/209 (43%)
Query: 285 LESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNC 344
L L L + ++N++ + S F ++ +K L LS N++E+L +G F+ L +L +L+L+
Sbjct: 90 LSQLTWLYLDHNNIEIVEESAFERLRRIKELDLSTNRIESLPNGTFRPLPNLRILDLSYN 149
Query: 345 GLTRLNETVFH--ENYTYPDLEELRLSGNPLHVLPDS-TKQY------SMRTIPTQIWKN 395
L L +FH T L L P+ + D + Q+ ++++ +
Sbjct: 150 RLQSLEPDLFHGLRKLTNLHLRYNALKFIPVRIFQDCRSMQFLDLGYNQLQSLARNSFAG 209
Query: 396 FDFLVILFILNETVFHENYT-YPDLEELR---LSGNPLHVLPTGNXXXXXXXXXXXXXXX 451
L L + + + N +P L LR + N ++ N
Sbjct: 210 LFKLTELHLEHNELVKVNLAHFPRLISLRTLYMRNNKATIVV--NTLEWTWDYLEKIDFS 267
Query: 452 XCKIDYLPPNVFNNTRNITSLNLANNNLS 480
+I+Y+ P+VF + + +L L +N L+
Sbjct: 268 NNEIEYIEPHVFESVPKLNTLMLDSNKLT 296
Score = 75 (31.5 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 16/49 (32%), Positives = 27/49 (55%)
Query: 507 THISPTVLRHNRAITSIKLVGNPWKCDCNIADMWEWATREKG--DIGVL 553
T+I +L +++SI L GN W+C N+ + W + +G D G+L
Sbjct: 296 TYIDQRILDSWTSLSSITLSGNDWECSRNVCALASWLSNFQGQRDSGLL 344
>MGI|MGI:3609246 [details] [associations]
symbol:Lingo3 "leucine rich repeat and Ig domain containing
3" species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:3609246 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 eggNOG:NOG278536 GeneTree:ENSGT00690000101682
HOGENOM:HOG000246971 HSSP:Q05793 HOVERGEN:HBG057546 CTD:645191
OMA:EIDNWPL OrthoDB:EOG4THVSV EMBL:AC166937 EMBL:BC072620
IPI:IPI00131641 RefSeq:NP_001013780.2 UniGene:Mm.40213
ProteinModelPortal:Q6GQU6 SMR:Q6GQU6 PhosphoSite:Q6GQU6
PRIDE:Q6GQU6 Ensembl:ENSMUST00000053986 GeneID:237403
KEGG:mmu:237403 UCSC:uc007gey.2 InParanoid:Q6GQU6 NextBio:383344
Bgee:Q6GQU6 Genevestigator:Q6GQU6 Uniprot:Q6GQU6
Length = 589
Score = 236 (88.1 bits), Expect = 2.0e-16, P = 2.0e-16
Identities = 92/334 (27%), Positives = 146/334 (43%)
Query: 55 INPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHL 114
+NP +L TL +LDL+ N + +EPG F L L L L L I P F +L+ L
Sbjct: 68 LNPGDLASLPTLEELDLNHNVIAHVEPGAFANLPRLRVLRLRGNQLKLIPPGVFTHLDSL 127
Query: 115 KTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENEL 174
L+LS+NKL +D++ +L L L++ + + + FA L L L L
Sbjct: 128 TLLDLSENKLVILLDFSFQ--DLRSLQRLEVGDNDLVFISRRAFAGLLGLAELTLERCNL 185
Query: 175 IDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVAL 234
L +LG +L L +L L + + L + F L L + PL +L
Sbjct: 186 TSLS-PESLG-HLRGLGALRLRHLAIAA-LEDQNFQKLPGLSHLEIDNWPLLEEVAPGSL 242
Query: 235 KPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMG 294
+ L L LS+ + ++ +PA + L L++SHNP+ L L L +
Sbjct: 243 RGLN-LTSLSITHTNITAVPAAALRQQAHLTCLNLSHNPISMVPRGSFRDLVRLRELHLA 301
Query: 295 YSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELN------NCGL-- 346
+ L I F+ + ++ L LS N L TLE F ++ L L ++ +C L
Sbjct: 302 GALLAVIEPQAFVGLRQIRLLNLSDNLLSTLEENTFHSVNTLETLRVDGNPLACDCRLLW 361
Query: 347 -TRLNETVFHENYTYPDLEELRLSGNPLHVLPDS 379
+ +T+ + + G+ LH LPDS
Sbjct: 362 IVQRRKTLNFDGRLPACATPAEVRGDALHNLPDS 395
Score = 189 (71.6 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 82/307 (26%), Positives = 137/307 (44%)
Query: 22 INLNANPIQPVEGAFLVARSLLY-LYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIE 80
+ L+ N I+ + L + L L + ++ + P F NL L L L GN L++I
Sbjct: 58 LELSRNRIRCLNPGDLASLPTLEELDLNHNVIAHVEPGAFANLPRLRVLRLRGNQLKLIP 117
Query: 81 PGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKL 140
PGVF L SL L L+ L + +F +L L+ LE+ N L I G LG L
Sbjct: 118 PGVFTHLDSLTLLDLSENKLVILLDFSFQDLRSLQRLEVGDNDLV-FISRRAFAGLLG-L 175
Query: 141 DTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHL 200
L L + +++L + L L L + L+ Q L L L++ N L
Sbjct: 176 AELTLERCNLTSLSPESLGHLRGLGALRLRHLAIAALEDQNF--QKLPGLSHLEIDNWPL 233
Query: 201 KGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHR 260
++ + + L +L ++ ++A + AL+ L L+L + +S +P +F
Sbjct: 234 LEEVAPGS-LRGLNLTSLSITHTNITAVP-AAALRQQAHLTCLNLSHNPISMVPRGSFRD 291
Query: 261 FTCLQELDISHNPLIDAFTALLSP-----LESLEHLDMGYSNLQRISRSTFLKMTSLKTL 315
L+EL H L A A++ P L + L++ + L + +TF + +L+TL
Sbjct: 292 LVRLREL---H--LAGALLAVIEPQAFVGLRQIRLLNLSDNLLSTLEENTFHSVNTLETL 346
Query: 316 ILSGNKL 322
+ GN L
Sbjct: 347 RVDGNPL 353
Score = 157 (60.3 bits), Expect = 7.1e-09, Sum P(2) = 7.1e-09
Identities = 74/297 (24%), Positives = 117/297 (39%)
Query: 193 LDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSR 252
L+LS ++ L+ + L L L+ N ++ + A L +L L LR L
Sbjct: 58 LELSRNRIRC-LNPGDLASLPTLEELDLNHNVIAHVEPG-AFANLPRLRVLRLRGNQLKL 115
Query: 253 LPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSL 312
+P F L LD+S N L+ L SL+ L++G ++L ISR F + L
Sbjct: 116 IPPGVFTHLDSLTLLDLSENKLVILLDFSFQDLRSLQRLEVGDNDLVFISRRAFAGLLGL 175
Query: 313 KTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNP 372
L L L +L +L L L L + + L + F + P L L + P
Sbjct: 176 AELTLERCNLTSLSPESLGHLRGLGALRLRHLAIAALEDQNFQK---LPGLSHLEIDNWP 232
Query: 373 L--HVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTYPDLEELRLSGNPLH 430
L V P S + ++ ++ N + + + H L L LS NP+
Sbjct: 233 LLEEVAPGSLRGLNLTSLSIT-HTNITAVPAAALRQQA--H-------LTCLNLSHNPIS 282
Query: 431 VLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSF 487
++P G+ + + P F R I LNL++N LS E +F
Sbjct: 283 MVPRGSFRDLVRLRELHLAGALLAV--IEPQAFVGLRQIRLLNLSDNLLSTLEENTF 337
Score = 152 (58.6 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 80/300 (26%), Positives = 128/300 (42%)
Query: 134 LGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSL 193
L +L L+ LDL + I+++ FAN LR L L N+L + HLDSL
Sbjct: 73 LASLPTLEELDLNHNVIAHVEPGAFANLPRLRVLRLRGNQLKLIPPGV-----FTHLDSL 127
Query: 194 ---DLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGL 250
DLS L L + +F + L+ L + N L A L L L+L C L
Sbjct: 128 TLLDLSENKLV-ILLDFSFQDLRSLQRLEVGDNDLVFISRR-AFAGLLGLAELTLERCNL 185
Query: 251 SRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDM-GYSNLQRISRSTFLKM 309
+ L + L L + H + L L HL++ + L+ ++ + L+
Sbjct: 186 TSLSPESLGHLRGLGALRLRHLAIAALEDQNFQKLPGLSHLEIDNWPLLEEVAPGS-LRG 244
Query: 310 TSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLS 369
+L +L ++ + + + + HL+ L L++ ++ + F + L EL L+
Sbjct: 245 LNLTSLSITHTNITAVPAAALRQQAHLTCLNLSHNPISMVPRGSFRDLVR---LRELHLA 301
Query: 370 GNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTYPDLEELRLSGNPL 429
G L V+ + +R I ++ D L L L E FH T LE LR+ GNPL
Sbjct: 302 GALLAVI-EPQAFVGLRQI--RLLNLSDNL--LSTLEENTFHSVNT---LETLRVDGNPL 353
Score = 57 (25.1 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 13/44 (29%), Positives = 23/44 (52%)
Query: 520 ITSIKLVGNPWKCDCNIADMWEWATREKGDI-GVLVGSTTPTEI 562
+ ++++ GNP CDC + +W R+ + G L TP E+
Sbjct: 343 LETLRVDGNPLACDCRL--LWIVQRRKTLNFDGRLPACATPAEV 384
>MGI|MGI:2156367 [details] [associations]
symbol:Tlr3 "toll-like receptor 3" species:10090 "Mus
musculus" [GO:0001934 "positive regulation of protein
phosphorylation" evidence=ISO] [GO:0002224 "toll-like receptor
signaling pathway" evidence=ISO] [GO:0002282 "microglial cell
activation involved in immune response" evidence=ISO] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=ISO] [GO:0004872 "receptor activity"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005768 "endosome" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0006952 "defense
response" evidence=IMP] [GO:0006954 "inflammatory response"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0007252 "I-kappaB phosphorylation" evidence=ISO] [GO:0009615
"response to virus" evidence=IMP] [GO:0009986 "cell surface"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0032481 "positive
regulation of type I interferon production" evidence=IDA]
[GO:0032722 "positive regulation of chemokine production"
evidence=ISO] [GO:0032728 "positive regulation of interferon-beta
production" evidence=IDA] [GO:0032735 "positive regulation of
interleukin-12 production" evidence=IDA] [GO:0032755 "positive
regulation of interleukin-6 production" evidence=ISO;IMP;IDA]
[GO:0032757 "positive regulation of interleukin-8 production"
evidence=ISO] [GO:0032760 "positive regulation of tumor necrosis
factor production" evidence=IDA;IMP] [GO:0034123 "positive
regulation of toll-like receptor signaling pathway" evidence=ISO]
[GO:0034346 "positive regulation of type III interferon production"
evidence=IDA] [GO:0042346 "positive regulation of NF-kappaB import
into nucleus" evidence=ISO] [GO:0043123 "positive regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IGI;IDA;IMP]
[GO:0043330 "response to exogenous dsRNA" evidence=IMP] [GO:0043331
"response to dsRNA" evidence=ISO] [GO:0045078 "positive regulation
of interferon-gamma biosynthetic process" evidence=ISO] [GO:0045080
"positive regulation of chemokine biosynthetic process"
evidence=IMP] [GO:0045087 "innate immune response" evidence=TAS]
[GO:0045356 "positive regulation of interferon-alpha biosynthetic
process" evidence=ISO] [GO:0045359 "positive regulation of
interferon-beta biosynthetic process" evidence=ISO;ISS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO;IDA] [GO:0046330 "positive regulation of JNK
cascade" evidence=IDA] [GO:0051092 "positive regulation of
NF-kappaB transcription factor activity" evidence=IMP] [GO:0051607
"defense response to virus" evidence=IGI;TAS] [GO:0052033
"pathogen-associated molecular pattern dependent induction by
symbiont of host innate immune response" evidence=ISO] [GO:0071360
"cellular response to exogenous dsRNA" evidence=ISO] Pfam:PF00560
InterPro:IPR000157 InterPro:IPR001611 InterPro:IPR027173
Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450 SMART:SM00255
MGI:MGI:2156367 GO:GO:0016021 GO:GO:0009986 GO:GO:0005789
GO:GO:0043123 GO:GO:0006954 GO:GO:0046330 GO:GO:0045944
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0045087 GO:GO:0032722 GO:GO:0032755 GO:GO:0004872
GO:GO:0051607 GO:GO:0010008 GO:GO:0008584 GO:GO:0043065
GO:GO:0035690 GO:GO:0003725 GO:GO:0051092 GO:GO:0032757
GO:GO:0071260 GO:GO:0001934 GO:GO:0071346 GO:GO:0035458
InterPro:IPR000372 SMART:SM00013 GO:GO:0032760 GO:GO:0002224
GO:GO:0052033 GO:GO:0043330 GO:GO:0032735 GO:GO:0042346
GO:GO:0045078 GO:GO:0002282 GO:GO:0032728 GO:GO:0007252
GO:GO:0045080 SUPFAM:SSF52200 GO:GO:0071360 GO:GO:0045359
GeneTree:ENSGT00680000099674 GO:GO:0034123 CTD:7098
HOVERGEN:HBG023181 KO:K05401 OrthoDB:EOG4N30N8
PANTHER:PTHR24365:SF5 HOGENOM:HOG000251618 OMA:IANINDD
GO:GO:0045356 GO:GO:0034346 EMBL:AF420279 EMBL:AF355152
EMBL:AK083977 IPI:IPI00320618 RefSeq:NP_569054.2 UniGene:Mm.33874
PDB:3CIG PDB:3CIY PDBsum:3CIG PDBsum:3CIY ProteinModelPortal:Q99MB1
SMR:Q99MB1 STRING:Q99MB1 PhosphoSite:Q99MB1 PaxDb:Q99MB1
PRIDE:Q99MB1 Ensembl:ENSMUST00000034056 Ensembl:ENSMUST00000167106
GeneID:142980 KEGG:mmu:142980 UCSC:uc009loy.1 eggNOG:NOG265249
InParanoid:Q99MB1 EvolutionaryTrace:Q99MB1 NextBio:370067
Bgee:Q99MB1 CleanEx:MM_TLR3 Genevestigator:Q99MB1
GermOnline:ENSMUSG00000031639 Uniprot:Q99MB1
Length = 905
Score = 239 (89.2 bits), Expect = 2.0e-16, P = 2.0e-16
Identities = 123/489 (25%), Positives = 192/489 (39%)
Query: 52 LSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNL 111
L+ I +N+T LN L+ N LR + P F + L L +++ + P L
Sbjct: 43 LTHIPDDLPSNITVLN---LTHNQLRRLPPTNFTRYSQLAILDAGFNSISKLEPELCQIL 99
Query: 112 NHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAE 171
LK L L N+L D T V L LDL + I + N F N L L+L+
Sbjct: 100 PLLKVLNLQHNELSQISDQTFVFCT--NLTELDLMSNSIHKIKSNPFKNQKNLIKLDLSH 157
Query: 172 NELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDA-FVNATKLRTLYLSGNPLSAADL 230
N L + T G L +L L L+ + SE+ F+ + LR L LS NPL
Sbjct: 158 NGLSSTKLGT--GVQLENLQELLLAKNKILALRSEELEFLGNSSLRKLDLSSNPLKEFSP 215
Query: 231 SVALKPLTKLHRLSLRNCGLS-RLPANTFHRF--TCLQELDISHNPLIDAFTALLSPLE- 286
+ + KL L L N L+ L T +Q L +++N L+ + S L+
Sbjct: 216 G-CFQTIGKLFALLLNNAQLNPHLTEKLCWELSNTSIQNLSLANNQLLATSESTFSGLKW 274
Query: 287 -SLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCG 345
+L LD+ Y+NL + +F + SL+ L L N ++ L F L++L L L
Sbjct: 275 TNLTQLDLSYNNLHDVGNGSFSYLPSLRYLSLEYNNIQRLSPRSFYGLSNLRYLSLKRAF 334
Query: 346 LTRLNETVFHEN---YTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFD--FLV 400
+ H N +++ L+ L + +P STK + + + + + F
Sbjct: 335 TKQSVSLASHPNIDDFSFQWLKYLEYLNMDDNNIP-STKSNTFTGLVSLKYLSLSKTFTS 393
Query: 401 ILFILNETVFHENYTYPDLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDY-LP 459
+ + NET + + L L L+ N H+ N +I+ L
Sbjct: 394 LQTLTNETFV--SLAHSPLLTLNLTKN--HISKIANGTFSWLGQLRILDLGLNEIEQKLS 449
Query: 460 PNVFNNTRNITSLNLANNNLSMTSELSFQFXXXXXXXXXXXXXXXXXTHISPTVLRHNRA 519
+ RNI + L+ N S SF ISP+ R R
Sbjct: 450 GQEWRGLRNIFEIYLSYNKYLQLSTSSFALVPSLQRLMLRRVALKN-VDISPSPFRPLRN 508
Query: 520 ITSIKLVGN 528
+T + L N
Sbjct: 509 LTILDLSNN 517
Score = 190 (71.9 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 107/368 (29%), Positives = 161/368 (43%)
Query: 19 LITINLNANPIQPVEGAFLVARSLL-YLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLR 77
L ++ N I +E LL L +Q LS+I+ Q F T L +LDL N +
Sbjct: 78 LAILDAGFNSISKLEPELCQILPLLKVLNLQHNELSQISDQTFVFCTNLTELDLMSNSIH 137
Query: 78 IIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTL-VLGN 136
I+ F +L L L+ L+ L +L+ L L++NK+ + L LGN
Sbjct: 138 KIKSNPFKNQKNLIKLDLSHNGLSSTKLGTGVQLENLQELLLAKNKILALRSEELEFLGN 197
Query: 137 LGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVH--LDSLD 194
L LDL + + F L L L N ++ + L L + + +L
Sbjct: 198 -SSLRKLDLSSNPLKEFSPGCFQTIGKLFAL-LLNNAQLNPHLTEKLCWELSNTSIQNLS 255
Query: 195 LSNCHLKGPLSEDAF--VNATKLRTLYLSGNPL-SAADLSVALKPLTK--------LHRL 243
L+N L SE F + T L L LS N L + S + P + + RL
Sbjct: 256 LANNQLLAT-SESTFSGLKWTNLTQLDLSYNNLHDVGNGSFSYLPSLRYLSLEYNNIQRL 314
Query: 244 SLRNC-GLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRIS 302
S R+ GLS L + R Q + ++ +P ID F+ L+ LE+L+M +N+
Sbjct: 315 SPRSFYGLSNLRYLSLKRAFTKQSVSLASHPNIDDFS--FQWLKYLEYLNMDDNNIPSTK 372
Query: 303 RSTFLKMTSLKTLILSGN--KLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTY 360
+TF + SLK L LS L+TL + F +L H +L LN LT+ N N T+
Sbjct: 373 SNTFTGLVSLKYLSLSKTFTSLQTLTNETFVSLAHSPLLTLN---LTK-NHISKIANGTF 428
Query: 361 PDLEELRL 368
L +LR+
Sbjct: 429 SWLGQLRI 436
Score = 172 (65.6 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 95/374 (25%), Positives = 167/374 (44%)
Query: 60 FTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRC--NLTYISPSAFDNLNH--LK 115
F L L L++ N + + F L SL+YL L++ +L ++ F +L H L
Sbjct: 352 FQWLKYLEYLNMDDNNIPSTKSNTFTGLVSLKYLSLSKTFTSLQTLTNETFVSLAHSPLL 411
Query: 116 TLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTW--LRNL---NLA 170
TL L++N + + T LG+L LDL G++ + + + W LRN+ L+
Sbjct: 412 TLNLTKNHISKIANGTFSW--LGQLRILDL---GLNEIEQKL-SGQEWRGLRNIFEIYLS 465
Query: 171 ENELIDLDVATTLGQNLVHLDSLDLSNCHLKG-PLSEDAFVNATKLRTLYLSGNPLSAAD 229
N+ + L +T+ + L L L LK +S F L L LS N ++ +
Sbjct: 466 YNKYLQL--STSSFALVPSLQRLMLRRVALKNVDISPSPFRPLRNLTILDLSNNNIANIN 523
Query: 230 LSVALKPLTKLHRLSLRNCGLSRL--------PANTFHRFTCLQELDISHNPLIDAFTAL 281
+ L+ L L L ++ L+RL P N + L L++ N L + +
Sbjct: 524 EDL-LEGLENLEILDFQHNNLARLWKRANPGGPVNFLKGLSHLHILNLESNGLDEIPVGV 582
Query: 282 LSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLF----QNLTHLS 337
L L+ +++G +NL ++ F TSL++L L N + ++E +F QNL L
Sbjct: 583 FKNLFELKSINLGLNNLNKLEPFIFDDQTSLRSLNLQKNLITSVEKDVFGPPFQNLNSLD 642
Query: 338 VLELN--NCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKN 395
+ N +C ++ V N T+ ++ EL S + L P + ++ T K+
Sbjct: 643 -MRFNPFDCTCESISWFVNWINQTHTNISEL--STHYLCNTPHHYYGFPLKLFDTSSCKD 699
Query: 396 FDFLVILFILNETV 409
+LFI++ ++
Sbjct: 700 SAPFELLFIISTSM 713
Score = 151 (58.2 bits), Expect = 7.0e-07, P = 7.0e-07
Identities = 86/331 (25%), Positives = 136/331 (41%)
Query: 64 TTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQN- 122
T L +LDLS N L + G F L SL YL L N+ +SP +F L++L+ L L +
Sbjct: 275 TNLTQLDLSYNNLHDVGNGSFSYLPSLRYLSLEYNNIQRLSPRSFYGLSNLRYLSLKRAF 334
Query: 123 -----KLKSH--IDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELI 175
L SH ID L L+ L++ + I + N F L+ L+L++
Sbjct: 335 TKQSVSLASHPNID-DFSFQWLKYLEYLNMDDNNIPSTKSNTFTGLVSLKYLSLSKT-FT 392
Query: 176 DLDVATT-LGQNLVH--LDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSV 232
L T +L H L +L+L+ H+ ++ F +LR L L N +
Sbjct: 393 SLQTLTNETFVSLAHSPLLTLNLTKNHIS-KIANGTFSWLGQLRILDLGLNEIEQKLSGQ 451
Query: 233 ALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPL--IDAFTALLSPLESLEH 290
+ L + + L +L ++F LQ L + L +D + PL +L
Sbjct: 452 EWRGLRNIFEIYLSYNKYLQLSTSSFALVPSLQRLMLRRVALKNVDISPSPFRPLRNLTI 511
Query: 291 LDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETL-----ESGLFQNLTHLSVLELNNCG 345
LD+ +N+ I+ + +L+ L N L L G L LS L + N
Sbjct: 512 LDLSNNNIANINEDLLEGLENLEILDFQHNNLARLWKRANPGGPVNFLKGLSHLHILNLE 571
Query: 346 LTRLNETVFHENYTYPDLEELRLSGNPLHVL 376
L+E +L+ + L N L+ L
Sbjct: 572 SNGLDEIPVGVFKNLFELKSINLGLNNLNKL 602
Score = 151 (58.2 bits), Expect = 7.0e-07, P = 7.0e-07
Identities = 93/375 (24%), Positives = 153/375 (40%)
Query: 130 WTLVLGNLG----KLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVAT-TLG 184
W L++ + + + D ++++PD++ +N T L NL N+L L T
Sbjct: 19 WILLVSSTNQCTVRYNVADCSHLKLTHIPDDLPSNITVL---NLTHNQLRRLPPTNFTRY 75
Query: 185 QNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSA-ADLSVALKPLTKLHRL 243
L LD+ S L+ L + + L+ L L N LS +D + T L L
Sbjct: 76 SQLAILDAGFNSISKLEPELCQILPL----LKVLNLQHNELSQISDQTFVF--CTNLTEL 129
Query: 244 SLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQ--RI 301
L + + ++ +N F L +LD+SHN L LE+L+ L + + + R
Sbjct: 130 DLMSNSIHKIKSNPFKNQKNLIKLDLSHNGLSSTKLGTGVQLENLQELLLAKNKILALRS 189
Query: 302 SRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLT-RLNETVFHENYTY 360
FL +SL+ L LS N L+ G FQ + L L LNN L L E + E +
Sbjct: 190 EELEFLGNSSLRKLDLSSNPLKEFSPGCFQTIGKLFALLLNNAQLNPHLTEKLCWE-LSN 248
Query: 361 PDLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTY-PDL 419
++ L L+ N L +ST ++ W N L + + V + +++Y P L
Sbjct: 249 TSIQNLSLANNQLLATSESTFS-GLK------WTNLTQLDLSYNNLHDVGNGSFSYLPSL 301
Query: 420 EELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCK--IDYLP-PNV----FNNTRNITSL 472
L L N + L + K + PN+ F + + L
Sbjct: 302 RYLSLEYNNIQRLSPRSFYGLSNLRYLSLKRAFTKQSVSLASHPNIDDFSFQWLKYLEYL 361
Query: 473 NLANNNLSMTSELSF 487
N+ +NN+ T +F
Sbjct: 362 NMDDNNIPSTKSNTF 376
Score = 133 (51.9 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 58/195 (29%), Positives = 89/195 (45%)
Query: 12 RNLDNPGLITINLNANP-IQPVEGAFLVARSLLYLYMQECTLSK--INPQFFTNLTTLNK 68
R L N + I L+ N +Q +F + SL L ++ L I+P F L L
Sbjct: 454 RGLRN--IFEIYLSYNKYLQLSTSSFALVPSLQRLMLRRVALKNVDISPSPFRPLRNLTI 511
Query: 69 LDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYI-------SPSAF-DNLNHLKTLELS 120
LDLS N + I + + L +LE L NL + P F L+HL L L
Sbjct: 512 LDLSNNNIANINEDLLEGLENLEILDFQHNNLARLWKRANPGGPVNFLKGLSHLHILNLE 571
Query: 121 QNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVA 180
N L I V NL +L +++L + ++ L +F + T LR+LNL +N + ++
Sbjct: 572 SNGL-DEIP-VGVFKNLFELKSINLGLNNLNKLEPFIFDDQTSLRSLNLQKNLITSVE-K 628
Query: 181 TTLGQNLVHLDSLDL 195
G +L+SLD+
Sbjct: 629 DVFGPPFQNLNSLDM 643
Score = 43 (20.2 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 15/59 (25%), Positives = 23/59 (38%)
Query: 419 LEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANN 477
L L L N L +P G ++ L P +F++ ++ SLNL N
Sbjct: 565 LHILNLESNGLDEIPVGVFKNLFELKSINLGLN--NLNKLEPFIFDDQTSLRSLNLQKN 621
>FB|FBgn0034476 [details] [associations]
symbol:Toll-7 "Toll-7" species:7227 "Drosophila melanogaster"
[GO:0005886 "plasma membrane" evidence=NAS] [GO:0004888
"transmembrane signaling receptor activity" evidence=ISS;NAS]
[GO:0006952 "defense response" evidence=NAS] [GO:0016021 "integral
to membrane" evidence=ISS] [GO:0007165 "signal transduction"
evidence=IEA;ISS] [GO:0002752 "cell surface pattern recognition
receptor signaling pathway" evidence=IC] [GO:0008329 "pattern
recognition receptor activity" evidence=IC] [GO:0051607 "defense
response to virus" evidence=IMP] [GO:0046790 "virion binding"
evidence=IDA] [GO:0009897 "external side of plasma membrane"
evidence=IDA] [GO:0010508 "positive regulation of autophagy"
evidence=IMP] Pfam:PF00560 InterPro:IPR000157 InterPro:IPR001611
Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450 EMBL:AE013599
GO:GO:0016021 GO:GO:0009897 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0010508 GO:GO:0051607
GO:GO:0005622 InterPro:IPR000372 SMART:SM00013 GO:GO:0008329
GO:GO:0046790 GO:GO:0002752 GeneTree:ENSGT00700000104442
SUPFAM:SSF52200 FlyBase:FBgn0034476 EMBL:AF247765
RefSeq:NP_523797.1 UniGene:Dm.2660 SMR:Q7KIN0
EnsemblMetazoa:FBtr0086336 GeneID:37272 KEGG:dme:Dmel_CG8595
UCSC:CG8595-RA CTD:37272 InParanoid:Q7KIN0 OMA:NHAFIGR
GenomeRNAi:37272 NextBio:802851 Uniprot:Q7KIN0
Length = 1446
Score = 252 (93.8 bits), Expect = 2.5e-16, Sum P(2) = 2.5e-16
Identities = 132/487 (27%), Positives = 205/487 (42%)
Query: 26 ANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLN---KLDLSGNPLRIIE-- 80
ANP QP A + S C L I Q +L + +L + + L + E
Sbjct: 65 ANPSQPSGPANQCSWSYNGTSSVHCALRLIERQPGLDLQGADGSSQLTIQCSELYLFEST 124
Query: 81 -P-GVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVL---- 134
P VF L +LE L L+ C L + +AF+ L LK+L LS + + TL L
Sbjct: 125 LPVAVFARLQTLEALRLDSCKLLQLPNNAFEGLATLKSLRLSTHNSEWGPTRTLELFPDS 184
Query: 135 -GNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENEL--------IDLDVATTLGQ 185
G L +L LDL + + LP L+ LNL N + D++ G
Sbjct: 185 LGGLKQLTDLDLGDNNLRQLPSGFLCPVGNLQVLNLTRNRIRTAEQMGFADMNCGAGSGS 244
Query: 186 NLVHLDSLDLSNCHLKGPLSEDAFVNATK-LRTLYLSGNPLSAADLS-VALKPLTKLHRL 243
L LD S+ L+ +SE ++ + L+ L L+ N LS +LS AL L L +
Sbjct: 245 AGSELQVLDASHNELRS-ISESWGISRLRRLQHLNLAYNNLS--ELSGEALAGLASLRIV 301
Query: 244 SLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNL--QRI 301
+L N L LP F L+E+ + N L + L LE L +D+ + L +
Sbjct: 302 NLSNNHLETLPEGLFAGSKELREIHLQQNELYELPKGLFHRLEQLLVVDLSGNQLTSNHV 361
Query: 302 SRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYP 361
+TF + L L L+ N L ++ F+ L L +L L N + + + F Y
Sbjct: 362 DNTTFAGLIRLIVLNLAHNALTRIDYRTFKELYFLQILNLRNNSIGHIEDNAFLPLY--- 418
Query: 362 DLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTYPDLEE 421
+L L L+ N LH L D K ++ + +++ N + ++ ++ VF +N + DL+E
Sbjct: 419 NLHTLNLAENRLHTLDD--KLFNGLYVLSKLTLNNN---LISVVEPAVF-KNCS--DLKE 470
Query: 422 LRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNLSM 481
L LS N L+ +P D F N +T L L +N +
Sbjct: 471 LDLSSNQLNEVPRALQDLAMLRTLDLGENQIRTFDN---QSFKNLHQLTGLRLIDNQIGN 527
Query: 482 TSELSFQ 488
+ FQ
Sbjct: 528 ITVGMFQ 534
Score = 220 (82.5 bits), Expect = 7.3e-13, Sum P(2) = 7.3e-13
Identities = 123/501 (24%), Positives = 208/501 (41%)
Query: 66 LNKLDLSGNPLRII-EPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKL 124
L LD S N LR I E L L++L L NL+ +S A L L+ + LS N L
Sbjct: 249 LQVLDASHNELRSISESWGISRLRRLQHLNLAYNNLSELSGEALAGLASLRIVNLSNNHL 308
Query: 125 KSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLG 184
++ + L G+ +L + L+Q+ + LP +F L ++L+ N+L V T
Sbjct: 309 ET-LPEGLFAGSK-ELREIHLQQNELYELPKGLFHRLEQLLVVDLSGNQLTSNHVDNTTF 366
Query: 185 QNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLS 244
L+ L L+L++ L + F L+ L L N + + + L PL LH L+
Sbjct: 367 AGLIRLIVLNLAHNALTR-IDYRTFKELYFLQILNLRNNSIGHIEDNAFL-PLYNLHTLN 424
Query: 245 LRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRS 304
L L L F+ L +L +++N + A+ L+ LD+ + L + R+
Sbjct: 425 LAENRLHTLDDKLFNGLYVLSKLTLNNNLISVVEPAVFKNCSDLKELDLSSNQLNEVPRA 484
Query: 305 TFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLE 364
+ L+TL L N++ T ++ F+NL L+ L L + + + +F + P L
Sbjct: 485 -LQDLAMLRTLDLGENQIRTFDNQSFKNLHQLTGLRLIDNQIGNITVGMFQD---LPRLS 540
Query: 365 ELRLSGNPLHVLPDST--KQYSMRTIPTQIWKNF--DF------LVILFILNETVFHE-- 412
L L+ N + + + K + + I ++ +NF D LV L LN + H
Sbjct: 541 VLNLAKNRIQSIERGSFDKNFELEAI--RLDRNFLADINGVFATLVSLLWLNLSENHLVW 598
Query: 413 -NYTY-P-DLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXC-KIDYLPPNVFNNTRN 468
+Y + P +L+ L + GN + L GN +I + P NT
Sbjct: 599 FDYAFIPSNLKWLDIHGNYIEAL--GNYYKLQEEIRVKTLDASHNRITEIGPMSIPNTIE 656
Query: 469 ITSLNLANNNLSMTSELSF----QFXXXXXXXXXXXXXXXXXTHISPTVLRHNRAITSIK 524
+ +N NN + +F ++P V + +
Sbjct: 657 LLFIN--NNLIGNVQPNAFVDKANLARVDLYANQLSKLQLQQLRVAPVVAP--KPLPEFY 712
Query: 525 LVGNPWKCDCNIADMWEWATR 545
L GNP++CDC + +W R
Sbjct: 713 LGGNPFECDCTM----DWLQR 729
Score = 203 (76.5 bits), Expect = 4.9e-11, Sum P(2) = 4.9e-11
Identities = 89/358 (24%), Positives = 158/358 (44%)
Query: 19 LITINLNANPIQPVEGAFLVAR--SLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPL 76
L ++ + N ++ + ++ ++R L +L + LS+++ + L +L ++LS N L
Sbjct: 249 LQVLDASHNELRSISESWGISRLRRLQHLNLAYNNLSELSGEALAGLASLRIVNLSNNHL 308
Query: 77 RIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKS-HIDWTLVLG 135
+ G+F L + L + L + F L L ++LS N+L S H+D T G
Sbjct: 309 ETLPEGLFAGSKELREIHLQQNELYELPKGLFHRLEQLLVVDLSGNQLTSNHVDNTTFAG 368
Query: 136 NLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDL 195
L +L L+L + ++ + F +L+ LNL N + ++ L L +L +L+L
Sbjct: 369 -LIRLIVLNLAHNALTRIDYRTFKELYFLQILNLRNNSIGHIEDNAFLP--LYNLHTLNL 425
Query: 196 SNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPA 255
+ L L + F L L L+ N +S + +V K + L L L + L+ +P
Sbjct: 426 AENRLH-TLDDKLFNGLYVLSKLTLNNNLISVVEPAV-FKNCSDLKELDLSSNQLNEVP- 482
Query: 256 NTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTL 315
L+ LD+ N + L L L + + + I+ F + L L
Sbjct: 483 RALQDLAMLRTLDLGENQIRTFDNQSFKNLHQLTGLRLIDNQIGNITVGMFQDLPRLSVL 542
Query: 316 ILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPL 373
L+ N+++++E G F L + L+ L +N VF T L L LS N L
Sbjct: 543 NLAKNRIQSIERGSFDKNFELEAIRLDRNFLADING-VFA---TLVSLLWLNLSENHL 596
Score = 98 (39.6 bits), Expect = 0.00094, Sum P(3) = 0.00094
Identities = 31/92 (33%), Positives = 43/92 (46%)
Query: 286 ESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCG 345
++L L + S + I TF + SL+ L L+ NKL TL F+ L+ L L L N
Sbjct: 853 KNLRALYVNGSQVAAIQNRTFASLASLQLLHLADNKLRTLHGYEFEQLSALRELYLQNNQ 912
Query: 346 LTRLNETVFHENYTYPDLEELRLSGNPLHVLP 377
LT + LE +R+ GN L LP
Sbjct: 913 LTTIENATLAP---LAALELIRIDGNRLVTLP 941
Score = 83 (34.3 bits), Expect = 0.00094, Sum P(3) = 0.00094
Identities = 48/170 (28%), Positives = 81/170 (47%)
Query: 15 DNPGLITINLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSG 73
D P L +NL N IQ +E G+F L + + L+ IN F T L +L L+LS
Sbjct: 535 DLPRLSVLNLAKNRIQSIERGSFDKNFELEAIRLDRNFLADINGVFAT-LVSLLWLNLSE 593
Query: 74 NPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSA-FDNLNH---LKTLELSQNKLKSHID 129
N L + F P ++L++L ++ YI + L +KTL+ S N++ + I
Sbjct: 594 NHLVWFDYA-FIP-SNLKWLDIHG---NYIEALGNYYKLQEEIRVKTLDASHNRI-TEIG 647
Query: 130 WTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDV 179
+ + N ++ L + + I N+ N F + L ++L N+L L +
Sbjct: 648 -PMSIPNT--IELLFINNNLIGNVQPNAFVDKANLARVDLYANQLSKLQL 694
Score = 40 (19.1 bits), Expect = 2.5e-16, Sum P(2) = 2.5e-16
Identities = 7/15 (46%), Positives = 8/15 (53%)
Query: 520 ITSIKLVGNPWKCDC 534
+ SI L N W C C
Sbjct: 954 LKSISLGRNQWSCRC 968
>RGD|727797 [details] [associations]
symbol:Rtn4rl2 "reticulon 4 receptor-like 2" species:10116
"Rattus norvegicus" [GO:0004872 "receptor activity"
evidence=ISO;ISS] [GO:0007166 "cell surface receptor signaling
pathway" evidence=NAS] [GO:0009897 "external side of plasma
membrane" evidence=IDA] [GO:0009986 "cell surface" evidence=ISO]
[GO:0045121 "membrane raft" evidence=IDA] [GO:0046658 "anchored to
plasma membrane" evidence=ISO;ISS] RGD:727797 GO:GO:0009897
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0004872 GO:GO:0045121 GO:GO:0007166
InterPro:IPR000372 SMART:SM00013 GO:GO:0046658
GeneTree:ENSGT00690000101803 HOGENOM:HOG000116109
HOVERGEN:HBG063707 OrthoDB:EOG4FXR7G CTD:349667 KO:K16661
OMA:WFREARV EMBL:AF532860 IPI:IPI00331880 RefSeq:NP_852045.1
UniGene:Rn.162683 ProteinModelPortal:Q80WD1 PRIDE:Q80WD1
Ensembl:ENSRNOT00000038250 GeneID:311169 KEGG:rno:311169
UCSC:RGD:727797 InParanoid:Q80WD1 NextBio:663102
Genevestigator:Q80WD1 GermOnline:ENSRNOG00000021513 Uniprot:Q80WD1
Length = 420
Score = 180 (68.4 bits), Expect = 2.6e-16, Sum P(2) = 2.6e-16
Identities = 65/206 (31%), Positives = 95/206 (46%)
Query: 68 KLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSH 127
+L L N +R + PG F P +L N NL+ I P F +L L+ L+L N+
Sbjct: 64 RLFLQNNLIRSLRPGTFGPNLLTLWLFSN--NLSTIYPGTFRHLQALEELDLGDNRHLRS 121
Query: 128 IDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNL 187
++ G L +L +L L + +S+LP N+F L+ L L EN L+ L L +L
Sbjct: 122 LEPDTFQG-LERLQSLHLYRCQLSSLPGNIFRGLVSLQYLYLQENSLLHLQ--DDLFADL 178
Query: 188 VHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRN 247
+L L L L+ L+E F L L L GN L + A L++L L L N
Sbjct: 179 ANLSHLFLHGNRLR-LLTEHVFRGLGSLDRLLLHGNRLQGVHRA-AFHGLSRLTILYLFN 236
Query: 248 CGLSRLPANTFHRFTCLQELDISHNP 273
L+ LP L+ L ++ NP
Sbjct: 237 NSLASLPGEALADLPALEFLRLNANP 262
Score = 168 (64.2 bits), Expect = 5.9e-15, Sum P(2) = 5.9e-15
Identities = 46/136 (33%), Positives = 66/136 (48%)
Query: 237 LTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYS 296
L +L L L C LS LP N F LQ L + N L+ L + L +L HL + +
Sbjct: 130 LERLQSLHLYRCQLSSLPGNIFRGLVSLQYLYLQENSLLHLQDDLFADLANLSHLFLHGN 189
Query: 297 NLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHE 356
L+ ++ F + SL L+L GN+L+ + F L+ L++L L N L L +
Sbjct: 190 RLRLLTEHVFRGLGSLDRLLLHGNRLQGVHRAAFHGLSRLTILYLFNNSLASLPGEALAD 249
Query: 357 NYTYPDLEELRLSGNP 372
P LE LRL+ NP
Sbjct: 250 ---LPALEFLRLNANP 262
Score = 151 (58.2 bits), Expect = 4.7e-13, Sum P(2) = 4.7e-13
Identities = 68/210 (32%), Positives = 93/210 (44%)
Query: 17 PGLITINLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNP 75
P + L N I+ + G F +LL L++ LS I P F +L L +LDL N
Sbjct: 60 PSTQRLFLQNNLIRSLRPGTF--GPNLLTLWLFSNNLSTIYPGTFRHLQALEELDLGDNR 117
Query: 76 -LRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVL 134
LR +EP F L L+ L L RC L+ + + F L L+ L L +N L H+ L
Sbjct: 118 HLRSLEPDTFQGLERLQSLHLYRCQLSSLPGNIFRGLVSLQYLYLQENSLL-HLQDDL-F 175
Query: 135 GNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLD 194
+L L L L + + L ++VF L L L N L + A G L L L
Sbjct: 176 ADLANLSHLFLHGNRLRLLTEHVFRGLGSLDRLLLHGNRLQGVHRAAFHG--LSRLTILY 233
Query: 195 LSNCHLKGPLSEDAFVNATKLRTLYLSGNP 224
L N L L +A + L L L+ NP
Sbjct: 234 LFNNSLAS-LPGEALADLPALEFLRLNANP 262
Score = 105 (42.0 bits), Expect = 5.6e-08, Sum P(2) = 5.6e-08
Identities = 48/164 (29%), Positives = 67/164 (40%)
Query: 215 LRTLYLSGNPLSAADLSVALKPLTKLHRLSLR-NCGLSRLPANTFHRFTCLQELDISHNP 273
L TL+L N LS + L L L L N L L +TF LQ L +
Sbjct: 84 LLTLWLFSNNLSTI-YPGTFRHLQALEELDLGDNRHLRSLEPDTFQGLERLQSLHLYRCQ 142
Query: 274 LIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNL 333
L + L SL++L + ++L + F + +L L L GN+L L +F+ L
Sbjct: 143 LSSLPGNIFRGLVSLQYLYLQENSLLHLQDDLFADLANLSHLFLHGNRLRLLTEHVFRGL 202
Query: 334 THLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLP 377
L L L+ L ++ FH L L L N L LP
Sbjct: 203 GSLDRLLLHGNRLQGVHRAAFHG---LSRLTILYLFNNSLASLP 243
Score = 99 (39.9 bits), Expect = 2.6e-16, Sum P(2) = 2.6e-16
Identities = 30/109 (27%), Positives = 43/109 (39%)
Query: 519 AITSIKLVGNPWKCDCNIADMWEWATREKGDIGVLVGSTTPTEIGFGASRKKKGLVCYFD 578
A+ ++L NPW CDC +W W R + + +T P G + F
Sbjct: 252 ALEFLRLNANPWACDCRARPLWAWFQRARVSSSDVTCATPPERQGRDLRTLRD---TDFQ 308
Query: 579 IFTTPTRKRPGRELFASTNKTWARYVKEADCPS---SKLFRP-PRTNSR 623
PT RPG +++ V EA P S L+R P +SR
Sbjct: 309 ACPPPTPTRPGSRARGNSSSNHLYGVAEAGAPPADPSTLYRDLPAEDSR 357
Score = 72 (30.4 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 42/143 (29%), Positives = 66/143 (46%)
Query: 296 SNLQRISR-STFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLEL-NNCGLTRLNETV 353
+NL R R TF +L TL L N L T+ G F++L L L+L +N L L
Sbjct: 69 NNLIRSLRPGTF--GPNLLTLWLFSNNLSTIYPGTFRHLQALEELDLGDNRHLRSL---- 122
Query: 354 FHENYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFH-E 412
E T+ LE L+ LH+ + + ++P I++ L L++ ++ H +
Sbjct: 123 --EPDTFQGLERLQ----SLHLY-----RCQLSSLPGNIFRGLVSLQYLYLQENSLLHLQ 171
Query: 413 NYTYPDLEELR---LSGNPLHVL 432
+ + DL L L GN L +L
Sbjct: 172 DDLFADLANLSHLFLHGNRLRLL 194
>MGI|MGI:1315203 [details] [associations]
symbol:Slit1 "slit homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0005102 "receptor binding" evidence=TAS]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005615 "extracellular
space" evidence=ISO;IDA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IMP;IDA]
[GO:0007411 "axon guidance" evidence=ISO;IGI;IDA] [GO:0008045
"motor neuron axon guidance" evidence=ISO] [GO:0021772 "olfactory
bulb development" evidence=IGI] [GO:0022028 "tangential migration
from the subventricular zone to the olfactory bulb" evidence=IMP]
[GO:0022029 "telencephalon cell migration" evidence=IGI]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0031290
"retinal ganglion cell axon guidance" evidence=IGI;IMP] [GO:0033563
"dorsal/ventral axon guidance" evidence=IGI] [GO:0040023
"establishment of nucleus localization" evidence=IDA] [GO:0043395
"heparan sulfate proteoglycan binding" evidence=ISO] [GO:0048495
"Roundabout binding" evidence=ISO;IPI] [GO:0048812 "neuron
projection morphogenesis" evidence=IGI] [GO:0048843 "negative
regulation of axon extension involved in axon guidance"
evidence=ISO] [GO:0048846 "axon extension involved in axon
guidance" evidence=ISO] [GO:0050919 "negative chemotaxis"
evidence=ISO;IMP] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 MGI:MGI:1315203
GO:GO:0005737 GO:GO:0005615 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005102
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0008045 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS50025
GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0040023 GO:GO:0031290 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
Pfam:PF12661 GO:GO:0033563 GO:GO:0051964 Pfam:PF01463
GeneTree:ENSGT00700000104083 GO:GO:0022028 GO:GO:0050919
GO:GO:0048843 CTD:6585 HOGENOM:HOG000116120 HOVERGEN:HBG057959
KO:K06838 OrthoDB:EOG4VDPXM EMBL:AF144627 EMBL:AK122376
EMBL:BC057131 EMBL:BC062091 IPI:IPI00330211 RefSeq:NP_056563.2
UniGene:Mm.40322 ProteinModelPortal:Q80TR4 SMR:Q80TR4 STRING:Q80TR4
PhosphoSite:Q80TR4 PRIDE:Q80TR4 Ensembl:ENSMUST00000025993
GeneID:20562 KEGG:mmu:20562 UCSC:uc008hmf.2 InParanoid:Q80TR4
OMA:KCVHGKC NextBio:298853 Bgee:Q80TR4 CleanEx:MM_SLIT1
Genevestigator:Q80TR4 GermOnline:ENSMUSG00000025020 Uniprot:Q80TR4
Length = 1531
Score = 228 (85.3 bits), Expect = 2.9e-16, Sum P(2) = 2.9e-16
Identities = 90/341 (26%), Positives = 151/341 (44%)
Query: 17 PGLIT-INLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGN 74
P +T I L N I+ + GAF R L + + +++I P F L +LN L L GN
Sbjct: 308 PETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGN 367
Query: 75 PLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVL 134
+ + GVF L +L+ L+LN + I P AF +L +L L L NK++S T
Sbjct: 368 KITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFT- 426
Query: 135 GNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLD 194
+L + TL L Q+ P N WL + L N + + L +
Sbjct: 427 -SLRAIQTLHLAQN-----PFICDCNLKWLADF-LRTNPIETTGARCASPRRLANKRIGQ 479
Query: 195 LSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLP 254
+ + + E F+ T+ +L N +D++ K + + + LS++P
Sbjct: 480 IKSKKFRCSAKEQYFIPGTE--DYHL--NSECTSDVACPHKCRCEASVVECSSLKLSKIP 535
Query: 255 ANTFHRFTCLQELDISHNPL-IDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLK 313
T EL +++N + I T L L L+ +++ + + I TF S+
Sbjct: 536 ERIPQSTT---ELRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGAASVS 592
Query: 314 TLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVF 354
L L+ N+LE++ SG+F+ L L L L N ++ ++ F
Sbjct: 593 ELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSF 633
Score = 171 (65.3 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 86/385 (22%), Positives = 156/385 (40%)
Query: 22 INLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIE 80
I+L+ N I + AF RSL L + ++ + F L TL L L+ N + I
Sbjct: 338 IDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLNANKINCIR 397
Query: 81 PGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKL--KSHIDWTLVLGNLG 138
P F L +L L L + ++ F +L ++TL L+QN ++ W
Sbjct: 398 PDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRTN 457
Query: 139 KLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDS---LDL 195
++T R + L N + + E + G HL+S D+
Sbjct: 458 PIETTGARCASPRRLA-NKRIGQIKSKKFRCSAKEQYFIP-----GTEDYHLNSECTSDV 511
Query: 196 S---NCHLKGPLSEDAFVNATKL--------RTLYLSGNPLSAADLSVALKPLTKLHRLS 244
+ C + + E + + +K+ L L+ N +S + + K L+ L +++
Sbjct: 512 ACPHKCRCEASVVECSSLKLSKIPERIPQSTTELRLNNNEISILEATGLFKKLSHLKKIN 571
Query: 245 LRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRS 304
L N +S + TF + EL ++ N L + + L+ L L + + + I
Sbjct: 572 LSNNKVSEIEDGTFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIHND 631
Query: 305 TFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLE 364
+F + +++ L L N + T+ G F L LS L L L H ++ L
Sbjct: 632 SFTGLRNVRLLSLYDNHITTISPGAFDTLQALSTLNL----LANPFNCNCHLSWLGDWLR 687
Query: 365 ELRL-SGNPLHVLPDSTKQYSMRTI 388
+ ++ +GNP PD +Q ++ +
Sbjct: 688 KRKIVTGNPRCQNPDFLRQIPLQDV 712
Score = 169 (64.5 bits), Expect = 2.7e-12, Sum P(2) = 2.7e-12
Identities = 93/354 (26%), Positives = 149/354 (42%)
Query: 38 VARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNR 97
+ R+ L + +++I+ F L L L L N + +E G FD + LE L LNR
Sbjct: 59 IPRNTERLELNGNNITRIHKNDFAGLKQLRVLQLMENQIGAVERGAFDDMKELERLRLNR 118
Query: 98 CNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNV 157
L + F N L L+LS+N L++ + G L L L ++ IS + +
Sbjct: 119 NQLQVLPELLFQNNQALSRLDLSENFLQA-VPRKAFRGATD-LKNLQLDKNRISCIEEGA 176
Query: 158 FANNTWLRNLNLAENELIDLDVAT-----TLGQNLVHLDSLDLSNCHLKGPLSEDAFVNA 212
F L L L N + + V++ L +H + L +CHL LS+
Sbjct: 177 FRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHL-FCDCHLAW-LSQWLRQRP 234
Query: 213 TKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCG-LSRLPANTFHRFTCLQELDISH 271
T SG P S L+VA + K S G + PA T +C S
Sbjct: 235 TIGLFTQCSG-PASLRGLNVA--EVQK-GEFSCSGQGEAAGAPACTLSSGSCPAMCSCSS 290
Query: 272 NPLIDA----FTALLSPL-ESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLE 326
++D TA+ + L E++ + + + ++ I F L+ + LS N++ +
Sbjct: 291 G-IVDCRGKGLTAIPANLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIA 349
Query: 327 SGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVL-PDS 379
FQ L L+ L L +T L VF YT L+ L L+ N ++ + PD+
Sbjct: 350 PDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYT---LQLLLLNANKINCIRPDA 400
Score = 159 (61.0 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 96/374 (25%), Positives = 155/374 (41%)
Query: 22 INLNANPIQPVE--GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRII 79
+ LN N I +E G F L + + +S+I F ++++L L+ N L I
Sbjct: 545 LRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGAASVSELHLTANQLESI 604
Query: 80 EPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLG---N 136
G+F L L LML ++ I +F L +++ L L N HI T+ G
Sbjct: 605 RSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDN----HIT-TISPGAFDT 659
Query: 137 LGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLS 196
L L TL+L ++N P N + +WL + L + +++ QN L + L
Sbjct: 660 LQALSTLNL----LAN-PFNCNCHLSWLGDW-LRKRKIV---TGNPRCQNPDFLRQIPLQ 710
Query: 197 NCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSL-----RNCGLS 251
+ E+ ++ L P A L ++ K H +L +N
Sbjct: 711 DVAFPDFRCEEG---QEEVGCLPRPQCPQECACLDTVVRCSNK-HLQALPKGIPKNVTEL 766
Query: 252 RLPANTF-------HRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRS 304
L N F F LQ +D+S+N + + + + L L + Y+ LQ I
Sbjct: 767 YLDGNQFTLVPGQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPL 826
Query: 305 TFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELN------NCGLTRLNETVFHENY 358
F + SL+ L L GN + TL+ G+F ++T LS L + +C L L+ V Y
Sbjct: 827 AFQGLRSLRLLSLHGNDVSTLQEGIFADVTSLSHLAIGANPLYCDCRLRWLSSWV-KTGY 885
Query: 359 TYPDLEELRLSGNP 372
P + R +G P
Sbjct: 886 KEPGIA--RCAGPP 897
Score = 132 (51.5 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 40/119 (33%), Positives = 56/119 (47%)
Query: 15 DNPGLITINLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSG 73
D L + LN N +Q + E F ++L L + E L + + F T L L L
Sbjct: 107 DMKELERLRLNRNQLQVLPELLFQNNQALSRLDLSENFLQAVPRKAFRGATDLKNLQLDK 166
Query: 74 NPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKL--KSHIDW 130
N + IE G F L LE L LN N+T I S+F+++ L+T L N L H+ W
Sbjct: 167 NRISCIEEGAFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAW 225
Score = 118 (46.6 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 30/93 (32%), Positives = 49/93 (52%)
Query: 282 LSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLEL 341
LS + L+ +D+ + + +S S+F M+ L TLILS N L+ + FQ L L +L L
Sbjct: 780 LSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSL 839
Query: 342 NNCGLTRLNETVFHENYTYPDLEELRLSGNPLH 374
+ ++ L E +F + L L + NPL+
Sbjct: 840 HGNDVSTLQEGIFAD---VTSLSHLAIGANPLY 869
Score = 88 (36.0 bits), Expect = 2.7e-12, Sum P(2) = 2.7e-12
Identities = 25/129 (19%), Positives = 52/129 (40%)
Query: 419 LEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNN 478
L+++ LS N + + G +++ + +F + +L L NN
Sbjct: 567 LKKINLSNNKVSEIEDGTFEGAASVSELHLTAN--QLESIRSGMFRGLDGLRTLMLRNNR 624
Query: 479 LSMTSELSFQFXXXXXXXXXXXXXXXXXTHISPTVLRHNRAITSIKLVGNPWKCDCNIAD 538
+S SF T ISP +A++++ L+ NP+ C+C+++
Sbjct: 625 ISCIHNDSF---TGLRNVRLLSLYDNHITTISPGAFDTLQALSTLNLLANPFNCNCHLSW 681
Query: 539 MWEWATREK 547
+ +W + K
Sbjct: 682 LGDWLRKRK 690
Score = 65 (27.9 bits), Expect = 2.9e-16, Sum P(2) = 2.9e-16
Identities = 26/125 (20%), Positives = 45/125 (36%)
Query: 418 DLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANN 477
++ EL L GN ++P G KI L + F N +T+L L+ N
Sbjct: 762 NVTELYLDGNQFTLVP-GQLSTFKYLQLVDLSNN--KISSLSNSSFTNMSQLTTLILSYN 818
Query: 478 NLSMTSELSFQFXXXXXXXXXXXXXXXXXTHISPTVLRHNRAITSIKLVGNPWKCDCNIA 537
L L+FQ + + + +++ + + NP CDC +
Sbjct: 819 ALQCIPPLAFQ---GLRSLRLLSLHGNDVSTLQEGIFADVTSLSHLAIGANPLYCDCRLR 875
Query: 538 DMWEW 542
+ W
Sbjct: 876 WLSSW 880
Score = 62 (26.9 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 23/83 (27%), Positives = 32/83 (38%)
Query: 454 KIDYLPPNVFNNTRNITSLNLANNNLSMTSELSFQFXXXXXXXXXXXXXXXXXTHISPTV 513
KI LP VF + L L N ++ +FQ + T
Sbjct: 368 KITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTS 427
Query: 514 LRHNRAITSIKLVGNPWKCDCNI 536
LR AI ++ L NP+ CDCN+
Sbjct: 428 LR---AIQTLHLAQNPFICDCNL 447
Score = 53 (23.7 bits), Expect = 9.1e-05, Sum P(2) = 9.1e-05
Identities = 10/34 (29%), Positives = 20/34 (58%)
Query: 455 IDYLPPNVFNNTRNITSLNLANNNLSMTSELSFQ 488
I +PP F+ R + ++L+NN ++ + +FQ
Sbjct: 321 IKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQ 354
Score = 41 (19.5 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 7/27 (25%), Positives = 16/27 (59%)
Query: 462 VFNNTRNITSLNLANNNLSMTSELSFQ 488
+F ++ +NL+NN +S + +F+
Sbjct: 560 LFKKLSHLKKINLSNNKVSEIEDGTFE 586
>FB|FBgn0052055 [details] [associations]
symbol:CG32055 species:7227 "Drosophila melanogaster"
[GO:0016942 "insulin-like growth factor binding protein complex"
evidence=ISS] [GO:0005520 "insulin-like growth factor binding"
evidence=ISS] InterPro:IPR001611 PROSITE:PS51450 EMBL:AE014296
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
GeneTree:ENSGT00690000101816 HSSP:Q9BZR6 InterPro:IPR026906
Pfam:PF13306 RefSeq:NP_729599.1 UniGene:Dm.27841
ProteinModelPortal:Q9VT89 SMR:Q9VT89 IntAct:Q9VT89 MINT:MINT-901114
EnsemblMetazoa:FBtr0076304 GeneID:39188 KEGG:dme:Dmel_CG32055
UCSC:CG32055-RA FlyBase:FBgn0052055 InParanoid:Q9VT89 OMA:LHSNWLE
OrthoDB:EOG4XD26B PhylomeDB:Q9VT89 GenomeRNAi:39188 NextBio:812398
ArrayExpress:Q9VT89 Bgee:Q9VT89 Uniprot:Q9VT89
Length = 534
Score = 224 (83.9 bits), Expect = 3.2e-16, Sum P(2) = 3.2e-16
Identities = 91/322 (28%), Positives = 143/322 (44%)
Query: 60 FTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLEL 119
F NL N S N + +IEP F + +L +L L I+ +N N L+ L +
Sbjct: 145 FGNLVYAN---FSENLIAVIEPNAFRHMKNLRFLDLTTNYQENITLG--ENAN-LRFLSI 198
Query: 120 SQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDV 179
S N L+ W L L KL+ L L + + +L +F LR LN++ N L ++
Sbjct: 199 SNNNLRD-FQWCH-LRVLPKLEELHLHSNWLEHLDMGIFYALPNLRVLNVSNNNLFEIKR 256
Query: 180 ATTLGQN-LVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLT 238
+ + L+ LD S+ +K L + F KLRTL L N ++ L L+
Sbjct: 257 TLFMAPGEIAPLELLDYSSNIVK-VLDDSVFCRLKKLRTLNLWLNQINRIHPRAFLG-LS 314
Query: 239 KLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSP--LESLEHLDMGYS 296
L L L+ +S LP + F T L++LD+S N + + L L +LD+ +
Sbjct: 315 SLQTLHLQGNKISILPDDVFANLTALEKLDLSKNNIQKLGLRVFGERILRKLIYLDLSNN 374
Query: 297 NLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHE 356
+ + M +K L L N+L +L+ +F L L +L +N L ++ +
Sbjct: 375 YIADLHPLALSSMPFIKELRLRRNRLVSLDLRMFAPLRQLQLLTINENRLEEIDGEILD- 433
Query: 357 NYTYPDLEELRLSGNPLHVLPD 378
T L L L+ N L LPD
Sbjct: 434 --TLDRLNHLELNNNRLTFLPD 453
Score = 209 (78.6 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 97/372 (26%), Positives = 160/372 (43%)
Query: 16 NPG-LITINLNANPIQPVEGAFLVA-RSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSG 73
NP +I +++ N I + + +L+Y E ++ I P F ++ L LDL+
Sbjct: 120 NPSEMINFDVSYNDILAITTKLMSGFGNLVYANFSENLIAVIEPNAFRHMKNLRFLDLTT 179
Query: 74 NPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLV 133
N I G +L +L ++ NL L L+ L L N L+ H+D
Sbjct: 180 NYQENITLG---ENANLRFLSISNNNLRDFQWCHLRVLPKLEELHLHSNWLE-HLD---- 231
Query: 134 LGNLGKLDTLDLRQSGISNLPDNVFA--NNTWLRNLNLAENELIDL--DVATTLGQNLV- 188
+G L +LR +SN +N+F ++ +A EL+D ++ L ++
Sbjct: 232 MGIFYALP--NLRVLNVSN--NNLFEIKRTLFMAPGEIAPLELLDYSSNIVKVLDDSVFC 287
Query: 189 HLDSLDLSNCHLK--GPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLR 246
L L N L + AF+ + L+TL+L GN +S V LT L +L L
Sbjct: 288 RLKKLRTLNLWLNQINRIHPRAFLGLSSLQTLHLQGNKISILPDDVFAN-LTALEKLDLS 346
Query: 247 NCGLSRLPANTFHR--FTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRS 304
+ +L F L LD+S+N + D LS + ++ L + + L +
Sbjct: 347 KNNIQKLGLRVFGERILRKLIYLDLSNNYIADLHPLALSSMPFIKELRLRRNRLVSLDLR 406
Query: 305 TFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLE 364
F + L+ L ++ N+LE ++ + L L+ LELNN LT L + +N L
Sbjct: 407 MFAPLRQLQLLTINENRLEEIDGEILDTLDRLNHLELNNNRLTFLPDLKSSQNLL--QLR 464
Query: 365 ELRLSGNPLHVL 376
+ L GNP L
Sbjct: 465 NITLEGNPWQCL 476
Score = 207 (77.9 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
Identities = 93/328 (28%), Positives = 149/328 (45%)
Query: 63 LTTLNKLDLS-GNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQ 121
L+TL +LDLS + + E G+ D +L+ L L L + F N + + ++S
Sbjct: 73 LSTLLQLDLSESGGVTLGEKGLQD-FKALQKLNLTHAQLDELKSEQFPNPSEMINFDVSY 131
Query: 122 NKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVAT 181
N + + T ++ G L + ++ I+ + N F + LR L+L N ++
Sbjct: 132 NDILAIT--TKLMSGFGNLVYANFSENLIAVIEPNAFRHMKNLRFLDLTTNYQENI---- 185
Query: 182 TLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLH 241
TLG+N +L L +SN +L+ V KL L+L N L D+ + L L
Sbjct: 186 TLGEN-ANLRFLSISNNNLRDFQWCHLRV-LPKLEELHLHSNWLEHLDMGI-FYALPNLR 242
Query: 242 RLSLRNCGLSRLPANTFH---RFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNL 298
L++ N L + F L+ LD S N + ++ L+ L L++ + +
Sbjct: 243 VLNVSNNNLFEIKRTLFMAPGEIAPLELLDYSSNIVKVLDDSVFCRLKKLRTLNLWLNQI 302
Query: 299 QRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENY 358
RI FL ++SL+TL L GNK+ L +F NLT L L+L+ + +L VF E
Sbjct: 303 NRIHPRAFLGLSSLQTLHLQGNKISILPDDVFANLTALEKLDLSKNNIQKLGLRVFGERI 362
Query: 359 TYPDLEELRLSGN---PLHVLPDSTKQY 383
L L LS N LH L S+ +
Sbjct: 363 LRK-LIYLDLSNNYIADLHPLALSSMPF 389
Score = 148 (57.2 bits), Expect = 8.0e-08, Sum P(2) = 8.0e-08
Identities = 84/368 (22%), Positives = 154/368 (41%)
Query: 2 WQGHPVYNDRRNLDN------PGLITI-NLNANPIQPV---EGAFLVARSLLYLYMQECT 51
W+ V N+ ++ PGL T+ L+ + V E ++L L +
Sbjct: 50 WKSVKVVNEHTGIERAEDGELPGLSTLLQLDLSESGGVTLGEKGLQDFKALQKLNLTHAQ 109
Query: 52 LSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNL 111
L ++ + F N + + D+S N + I + +L Y + + I P+AF ++
Sbjct: 110 LDELKSEQFPNPSEMINFDVSYNDILAITTKLMSGFGNLVYANFSENLIAVIEPNAFRHM 169
Query: 112 NHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAE 171
+L+ L+L+ N ++ + LG L L + + + + L L+L
Sbjct: 170 KNLRFLDLTTNYQEN-----ITLGENANLRFLSISNNNLRDFQWCHLRVLPKLEELHLHS 224
Query: 172 NELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYL---SGNPLSAA 228
N L LD+ L +L L++SN +L + F+ ++ L L S N +
Sbjct: 225 NWLEHLDMGIFYA--LPNLRVLNVSNNNLF-EIKRTLFMAPGEIAPLELLDYSSNIVKVL 281
Query: 229 DLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESL 288
D SV + L KL L+L ++R+ F + LQ L + N + + + L +L
Sbjct: 282 DDSVFCR-LKKLRTLNLWLNQINRIHPRAFLGLSSLQTLHLQGNKISILPDDVFANLTAL 340
Query: 289 EHLDMGYSNLQRISRSTFLK--MTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGL 346
E LD+ +N+Q++ F + + L L LS N + L ++ + L L L
Sbjct: 341 EKLDLSKNNIQKLGLRVFGERILRKLIYLDLSNNYIADLHPLALSSMPFIKELRLRRNRL 400
Query: 347 TRLNETVF 354
L+ +F
Sbjct: 401 VSLDLRMF 408
Score = 139 (54.0 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 81/340 (23%), Positives = 136/340 (40%)
Query: 148 SGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSED 207
+GI D + L L+L+E+ + L Q+ L L+L++ L L +
Sbjct: 60 TGIERAEDGELPGLSTLLQLDLSESGGVTLGEKGL--QDFKALQKLNLTHAQLD-ELKSE 116
Query: 208 AFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCG---LSRLPANTFHRFTCL 264
F N +++ +S N + L++ K ++ L N ++ + N F L
Sbjct: 117 QFPNPSEMINFDVSYNDI----LAITTKLMSGFGNLVYANFSENLIAVIEPNAFRHMKNL 172
Query: 265 QELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLET 324
+ LD++ N + T L +L L + +NL+ + L+ L L N LE
Sbjct: 173 RFLDLTTN-YQENIT--LGENANLRFLSISNNNLRDFQWCHLRVLPKLEELHLHSNWLEH 229
Query: 325 LESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDST--KQ 382
L+ G+F L +L VL ++N L + T+F LE L S N + VL DS +
Sbjct: 230 LDMGIFYALPNLRVLNVSNNNLFEIKRTLFMAPGEIAPLELLDYSSNIVKVLDDSVFCRL 289
Query: 383 YSMRTIPTQIWKNFDFLVILFILNETVFHENYTYPDLEELRLSGNPLHVLPTGNXXXXXX 442
+RT+ +W N +N L+ L L GN + +LP +
Sbjct: 290 KKLRTL--NLWLNQ--------INRIHPRAFLGLSSLQTLHLQGNKISILP--DDVFANL 337
Query: 443 XXXXXXXXXXCKIDYLPPNVFNNT--RNITSLNLANNNLS 480
I L VF R + L+L+NN ++
Sbjct: 338 TALEKLDLSKNNIQKLGLRVFGERILRKLIYLDLSNNYIA 377
Score = 55 (24.4 bits), Expect = 3.2e-16, Sum P(2) = 3.2e-16
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 520 ITSIKLVGNPWKCDCNIADMWEW 542
+ +I L GNPW+C C + ++ W
Sbjct: 463 LRNITLEGNPWQCLC-LDEITSW 484
>RGD|1309087 [details] [associations]
symbol:Lrrc32 "leucine rich repeat containing 32" species:10116
"Rattus norvegicus" [GO:0010628 "positive regulation of gene
expression" evidence=IEA] [GO:0046007 "negative regulation of
activated T cell proliferation" evidence=IEA] [GO:0050710 "negative
regulation of cytokine secretion" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 RGD:1309087 EMBL:CH473956
InterPro:IPR003591 SMART:SM00369 GO:GO:0010628 InterPro:IPR000372
SMART:SM00013 GO:GO:0046007 GO:GO:0050710
GeneTree:ENSGT00700000104185 CTD:2615 OMA:CCGNGWL OrthoDB:EOG4DBTF0
IPI:IPI00368447 RefSeq:NP_001163905.1 UniGene:Rn.66859
Ensembl:ENSRNOT00000020520 GeneID:293135 KEGG:rno:293135
UCSC:RGD:1309087 NextBio:635427 Uniprot:D3ZVD5
Length = 663
Score = 235 (87.8 bits), Expect = 3.3e-16, P = 3.3e-16
Identities = 110/367 (29%), Positives = 172/367 (46%)
Query: 17 PGLITINLNANPIQP--VEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGN 74
P +++++L+ N + VE A L L + E +L+++ F + + +LDL N
Sbjct: 125 PLVVSLDLSGNSLHGSLVERLLGEAPRLRTLSLAENSLTRLARHTFWGMPAMEQLDLHSN 184
Query: 75 PLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVL 134
L IE G F+ L L +L L+R +LT IS F +L L+ L+LS N +++
Sbjct: 185 VLMDIEDGAFEALPQLTHLNLSRNSLTCISD--F-SLQQLQVLDLSCNSIETFQTAPESQ 241
Query: 135 GNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLD 194
+L LDLR++ + + PD A L LN++ N LI L +H S
Sbjct: 242 AQF-QLAWLDLRENKLLHFPD--LAMFPRLIYLNVSNN-LIQLPTGLPQDSEDLHAPSEG 297
Query: 195 LSNCHLKGPLSEDAFVNA-TKLRTLYLSGNPLSAADLSVALKPLTKLHRLSL-RNCGLSR 252
S L P S +A ++ ++L L LS N + L+ LT L L+L RNC L
Sbjct: 298 WSASLLSNP-SRNASIHPLSQLLNLDLSYNEIELVPAGF-LEHLTSLRFLNLSRNC-LRS 354
Query: 253 LPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSL 312
A CL LD+SHN +++A L SL+ L + + L+ + TF + SL
Sbjct: 355 FEARRAGSLPCLVLLDLSHN-VLEALELGTKVLGSLKTLLLQDNTLRELPPYTFAGLASL 413
Query: 313 KTLILSGNKLETL----ESGL--FQNLTHLSVLE-LNNCGLTRLNETVFHENYTYPDLEE 365
+ L L GN++ E G + + + L LN G + ET+ ++ + L E
Sbjct: 414 QRLNLQGNQVSPCGGQAEPGPPGCVDFSGIPTLHFLNMAGNSM--ETLRAGSFLHTPLTE 471
Query: 366 LRLSGNP 372
L LS NP
Sbjct: 472 LDLSANP 478
Score = 207 (77.9 bits), Expect = 3.7e-13, P = 3.7e-13
Identities = 103/355 (29%), Positives = 156/355 (43%)
Query: 45 LYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTY-- 102
LY+ L I + T L LDLS N + ++PGVF L LE+L L L
Sbjct: 55 LYLSGNRLQSILVSPLSFYTALRHLDLSDNEISFLQPGVFQALPYLEHLNLAHNRLAAGM 114
Query: 103 -ISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANN 161
++ L + +L+LS N L + L LG +L TL L ++ ++ L + F
Sbjct: 115 ALNSGGLGRLPLVVSLDLSGNSLHGSLVERL-LGEAPRLRTLSLAENSLTRLARHTFWGM 173
Query: 162 TWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLS 221
+ L+L N L+D++ + L L L+LS L +S+ + +L+ L LS
Sbjct: 174 PAMEQLDLHSNVLMDIEDGAF--EALPQLTHLNLSRNSLTC-ISD---FSLQQLQVLDLS 227
Query: 222 GNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTAL 281
N + + + +L L LR L P F L L++S+N LI T L
Sbjct: 228 CNSIETFQTAPESQAQFQLAWLDLRENKLLHFP--DLAMFPRLIYLNVSNN-LIQLPTGL 284
Query: 282 LSPLESLEHLDMGYSN--LQRISRSTFLK-MTSLKTLILSGNKLETLESGLFQNLTHLSV 338
E L G+S L SR+ + ++ L L LS N++E + +G ++LT L
Sbjct: 285 PQDSEDLHAPSEGWSASLLSNPSRNASIHPLSQLLNLDLSYNEIELVPAGFLEHLTSLRF 344
Query: 339 LELN-NCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQY-SMRTIPTQ 391
L L+ NC L + P L L LS N L L TK S++T+ Q
Sbjct: 345 LNLSRNC----LRSFEARRAGSLPCLVLLDLSHNVLEALELGTKVLGSLKTLLLQ 395
Score = 162 (62.1 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 71/229 (31%), Positives = 107/229 (46%)
Query: 8 YNDRRNLDNPGLITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLN 67
+ RR P L+ ++L+ N ++ +E V SL L +Q+ TL ++ P F L +L
Sbjct: 355 FEARRAGSLPCLVLLDLSHNVLEALELGTKVLGSLKTLLLQDNTLRELPPYTFAGLASLQ 414
Query: 68 KLDLSGNPLRII----EPGV-----FDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLE 118
+L+L GN + EPG F + +L +L + ++ + +F + L L+
Sbjct: 415 RLNLQGNQVSPCGGQAEPGPPGCVDFSGIPTLHFLNMAGNSMETLRAGSFLH-TPLTELD 473
Query: 119 LSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLD 178
LS N LV G L+ L+L+ +G+ L ++ L+ LNLAEN L L
Sbjct: 474 LSANPGLDVATGALV-GLEASLEVLELQGNGLVVLRVDLPCFRR-LKRLNLAENRLSHLP 531
Query: 179 VATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNA-TKLRTLYLSGNPLS 226
T V L+ LDL N L +A T LR LYL GNPLS
Sbjct: 532 AWT----RAVSLEVLDLRNNSFS-LLPGNAMGGLETSLRRLYLQGNPLS 575
Score = 162 (62.1 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 96/329 (29%), Positives = 149/329 (45%)
Query: 17 PGLITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKI-NPQFFTNLTTLNKL---DLS 72
P LI +N++ N IQ G + L + + + S + NP ++ L++L DLS
Sbjct: 266 PRLIYLNVSNNLIQLPTGLPQDSEDL-HAPSEGWSASLLSNPSRNASIHPLSQLLNLDLS 324
Query: 73 GNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTL 132
N + ++ G + LTSL +L L+R L +L L L+LS N L++ L
Sbjct: 325 YNEIELVPAGFLEHLTSLRFLNLSRNCLRSFEARRAGSLPCLVLLDLSHNVLEA-----L 379
Query: 133 VLGN--LGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQ-NLVH 189
LG LG L TL L+ + + LP FA L+ LNL N++ G V
Sbjct: 380 ELGTKVLGSLKTLLLQDNTLRELPPYTFAGLASLQRLNLQGNQVSPCGGQAEPGPPGCVD 439
Query: 190 LDSLD-LSNCHLKG----PLSEDAFVNATKLRTLYLSGNPLSAADLSV-ALKPL-TKLHR 242
+ L ++ G L +F++ T L L LS NP D++ AL L L
Sbjct: 440 FSGIPTLHFLNMAGNSMETLRAGSFLH-TPLTELDLSANP--GLDVATGALVGLEASLEV 496
Query: 243 LSLRNCGLSRLPANTFHRFTCLQELDISHNPL--IDAFTALLSPLESLEHLDMGYSNLQR 300
L L+ GL L + F L+ L+++ N L + A+T +S LE LD+ ++
Sbjct: 497 LELQGNGLVVLRVD-LPCFRRLKRLNLAENRLSHLPAWTRAVS----LEVLDLRNNSFSL 551
Query: 301 ISRSTFLKM-TSLKTLILSGNKLETLESG 328
+ + + TSL+ L L GN L +G
Sbjct: 552 LPGNAMGGLETSLRRLYLQGNPLSCCGNG 580
Score = 155 (59.6 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 75/278 (26%), Positives = 121/278 (43%)
Query: 162 TWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKG--PLSEDAFVNATKLRTLY 219
T LR+L+L++NE+ L Q L +L+ L+L++ L L+ + +L
Sbjct: 74 TALRHLDLSDNEISFLQPGVF--QALPYLEHLNLAHNRLAAGMALNSGGLGRLPLVVSLD 131
Query: 220 LSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFT 279
LSGN L + + L +L LSL L+RL +TF +++LD+ N L+D
Sbjct: 132 LSGNSLHGSLVERLLGEAPRLRTLSLAENSLTRLARHTFWGMPAMEQLDLHSNVLMDIED 191
Query: 280 ALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGL-FQNLTHLSV 338
L L HL++ ++L IS + L+ L LS N +ET ++ Q L+
Sbjct: 192 GAFEALPQLTHLNLSRNSLTCISD---FSLQQLQVLDLSCNSIETFQTAPESQAQFQLAW 248
Query: 339 LELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQYSMRT-IPTQIWKNFD 397
L+L L F + +P L L +S N + LP Q S P++ W
Sbjct: 249 LDLRENKLLH-----FPDLAMFPRLIYLNVSNNLIQ-LPTGLPQDSEDLHAPSEGWS--- 299
Query: 398 FLVILFILNETVFHENYTYPDLEELRLSGNPLHVLPTG 435
+ N + + L L LS N + ++P G
Sbjct: 300 ---ASLLSNPSRNASIHPLSQLLNLDLSYNEIELVPAG 334
Score = 138 (53.6 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 64/215 (29%), Positives = 103/215 (47%)
Query: 66 LNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLK 125
+ L LSGN L+ I T+L +L L+ ++++ P F L +L+ L L+ N+L
Sbjct: 52 IQALYLSGNRLQSILVSPLSFYTALRHLDLSDNEISFLQPGVFQALPYLEHLNLAHNRLA 111
Query: 126 SHIDWTLVLGNLGKLD---TLDLRQSGI-SNLPDNVFANNTWLRNLNLAENELIDLDVAT 181
+ + L G LG+L +LDL + + +L + + LR L+LAEN L L T
Sbjct: 112 AGM--ALNSGGLGRLPLVVSLDLSGNSLHGSLVERLLGEAPRLRTLSLAENSLTRLARHT 169
Query: 182 TLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSA-ADLSVALKPLTKL 240
G + ++ LDL + L + + AF +L L LS N L+ +D S L+ L L
Sbjct: 170 FWG--MPAMEQLDLHSNVLMD-IEDGAFEALPQLTHLNLSRNSLTCISDFS--LQQLQVL 224
Query: 241 HRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLI 275
LS + + + +F L LD+ N L+
Sbjct: 225 D-LSCNSIETFQTAPESQAQFQ-LAWLDLRENKLL 257
Score = 135 (52.6 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 105/386 (27%), Positives = 163/386 (42%)
Query: 17 PGLITINLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNP 75
P + ++L++N + +E GAF L +L + +L+ I+ F +L L LDLS N
Sbjct: 174 PAMEQLDLHSNVLMDIEDGAFEALPQLTHLNLSRNSLTCIS-DF--SLQQLQVLDLSCNS 230
Query: 76 LRIIEPGVFDPLT-SLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVL 134
+ + L +L L L + A L L +S N ++
Sbjct: 231 IETFQTAPESQAQFQLAWLDLRENKLLHFPDLAM--FPRLIYLNVSNNLIQLPTGLPQDS 288
Query: 135 GNLGKLDTLDLRQSGISNLPDNVFANN-TWLRNLNLAENELIDLDVATTLGQNLVHLDSL 193
+L + S +SN N + + L NL+L+ NE I+L A L ++L L L
Sbjct: 289 EDL-HAPSEGWSASLLSNPSRNASIHPLSQLLNLDLSYNE-IELVPAGFL-EHLTSLRFL 345
Query: 194 DLS-NCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSR 252
+LS NC L+ + A + L L LS N L A +L K L L L L++ L
Sbjct: 346 NLSRNC-LRSFEARRAG-SLPCLVLLDLSHNVLEALELGT--KVLGSLKTLLLQDNTLRE 401
Query: 253 LPANTFHRFTCLQELDISHNPLIDAFTAL---------LSPLESLEHLDMGYSNLQRISR 303
LP TF LQ L++ N + S + +L L+M ++++ +
Sbjct: 402 LPPYTFAGLASLQRLNLQGNQVSPCGGQAEPGPPGCVDFSGIPTLHFLNMAGNSMETLRA 461
Query: 304 STFLKMTSLKTLILSGNKLETLESGLFQNL-THLSVLELNNCGLTRLNETVFHENYTYPD 362
+FL T L L LS N + +G L L VLEL GL L + +
Sbjct: 462 GSFLH-TPLTELDLSANPGLDVATGALVGLEASLEVLELQGNGLVVLRVDL----PCFRR 516
Query: 363 LEELRLSGNPLHVLPDSTKQYSMRTI 388
L+ L L+ N L LP T+ S+ +
Sbjct: 517 LKRLNLAENRLSHLPAWTRAVSLEVL 542
>UNIPROTKB|Q7L0X0 [details] [associations]
symbol:TRIL "TLR4 interactor with leucine rich repeats"
species:9606 "Homo sapiens" [GO:0006954 "inflammatory response"
evidence=IEA] [GO:0045087 "innate immune response" evidence=IEA]
[GO:0002718 "regulation of cytokine production involved in immune
response" evidence=IDA] [GO:0001530 "lipopolysaccharide binding"
evidence=IDA] [GO:0046696 "lipopolysaccharide receptor complex"
evidence=IDA] [GO:0034142 "toll-like receptor 4 signaling pathway"
evidence=IDA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
EMBL:CH471073 GO:GO:0006954 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0045087 EMBL:CH236948
InterPro:IPR000372 SMART:SM00013 GO:GO:0034142 GO:GO:0046696
GO:GO:0001530 HSSP:Q9BZR6 EMBL:AC005013 Pfam:PF01463 EMBL:AB014544
EMBL:BC036337 IPI:IPI00006556 RefSeq:NP_055632.2 UniGene:Hs.21572
ProteinModelPortal:Q7L0X0 SMR:Q7L0X0 IntAct:Q7L0X0 DMDM:311033514
PRIDE:Q7L0X0 GeneID:9865 KEGG:hsa:9865 UCSC:uc003szt.3 CTD:9865
GeneCards:GC07M028992 HGNC:HGNC:22200 MIM:613356 neXtProt:NX_Q7L0X0
HOVERGEN:HBG066060 GenomeRNAi:9865 NextBio:37186
Genevestigator:Q7L0X0 GO:GO:0002718 Uniprot:Q7L0X0
Length = 811
Score = 236 (88.1 bits), Expect = 3.6e-16, P = 3.6e-16
Identities = 95/292 (32%), Positives = 130/292 (44%)
Query: 60 FTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLEL 119
F L L +LDL N +R + P F+ L+ LE L L L ++P L L+ L
Sbjct: 79 FHRLGQLRRLDLQYNQIRSLHPKTFEKLSRLEELYLGNNLLQALAPGTLAPLRKLRILYA 138
Query: 120 SQNKLKSHIDWTLVLGNLGKLDTL-DLRQSG--ISNLPDNVFANNTWLRNLNLAENELID 176
+ N++ L G+ L++L LR G + LPD VFA L L+L N +
Sbjct: 139 NGNEISR-----LSRGSFEGLESLVKLRLDGNALGALPDAVFAPLGNLLYLHLESNRIRF 193
Query: 177 LDVATTLGQNLVHLDSLDLSNCHLKGPLSEDA-FVNATKLRTLYLSGNPLSAADLSVALK 235
L Q L L L+LS L+ L A F L +L LS N L + +
Sbjct: 194 LG-KNAFAQ-LGKLRFLNLSANELQPSLRHAATFAPLRSLSSLILSANNLQHLGPRI-FQ 250
Query: 236 PLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGY 295
L +L LSLR L+ L F L+EL + N L TALL PL SLE LD+
Sbjct: 251 HLPRLGLLSLRGNQLTHLAPEAFWGLEALRELRLEGNRLSQLPTALLEPLHSLEALDLSG 310
Query: 296 SNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLT 347
+ L + +TF + L+ L L N L L +F L L+L+ G T
Sbjct: 311 NELSALHPATFGHLGRLRELSLRNNALSALSGDIFAASPALYRLDLDGNGWT 362
Score = 231 (86.4 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 100/312 (32%), Positives = 135/312 (43%)
Query: 13 NLDNP-GLITINLNANPIQPVEGAFLVAR--SLLYLYMQECTLSKINPQFFTNLTTLNKL 69
+L +P ++T +L N I + AF R L L +Q + ++P+ F L+ L +L
Sbjct: 54 SLPSPHDVLTYSLGGNFITNIT-AFDFHRLGQLRRLDLQYNQIRSLHPKTFEKLSRLEEL 112
Query: 70 DLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHID 129
L N L+ + PG PL L L N ++ +S +F+ L L L L N L + D
Sbjct: 113 YLGNNLLQALAPGTLAPLRKLRILYANGNEISRLSRGSFEGLESLVKLRLDGNALGALPD 172
Query: 130 WTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELI-DLDVATTLGQNLV 188
V LG L L L + I L N FA LR LNL+ NEL L A T L
Sbjct: 173 --AVFAPLGNLLYLHLESNRIRFLGKNAFAQLGKLRFLNLSANELQPSLRHAATFAP-LR 229
Query: 189 HLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNC 248
L SL LS +L+ L F + +L L L GN L+ A L L L L
Sbjct: 230 SLSSLILSANNLQH-LGPRIFQHLPRLGLLSLRGNQLTHL-APEAFWGLEALRELRLEGN 287
Query: 249 GLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLK 308
LS+LP L+ LD+S N L A L L L + + L +S F
Sbjct: 288 RLSQLPTALLEPLHSLEALDLSGNELSALHPATFGHLGRLRELSLRNNALSALSGDIFAA 347
Query: 309 MTSLKTLILSGN 320
+L L L GN
Sbjct: 348 SPALYRLDLDGN 359
Score = 195 (73.7 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 93/304 (30%), Positives = 124/304 (40%)
Query: 71 LSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDW 130
L GN + I F L L L L + + P F+ L+ L+ L L N L++
Sbjct: 66 LGGNFITNITAFDFHRLGQLRRLDLQYNQIRSLHPKTFEKLSRLEELYLGNNLLQALAPG 125
Query: 131 TLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLD--VATTLGQNLV 188
TL L KL L + IS L F L L L N L L V LG NL+
Sbjct: 126 TLA--PLRKLRILYANGNEISRLSRGSFEGLESLVKLRLDGNALGALPDAVFAPLG-NLL 182
Query: 189 HLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVA-LKPLTKLHRLSLRN 247
+L L+ + G ++AF KLR L LS N L + A PL L L L
Sbjct: 183 YLH-LESNRIRFLG---KNAFAQLGKLRFLNLSANELQPSLRHAATFAPLRSLSSLILSA 238
Query: 248 CGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFL 307
L L F L L + N L LE+L L + + L ++ +
Sbjct: 239 NNLQHLGPRIFQHLPRLGLLSLRGNQLTHLAPEAFWGLEALRELRLEGNRLSQLPTALLE 298
Query: 308 KMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELR 367
+ SL+ L LSGN+L L F +L L L L N L+ L+ +F + P L L
Sbjct: 299 PLHSLEALDLSGNELSALHPATFGHLGRLRELSLRNNALSALSGDIFAAS---PALYRLD 355
Query: 368 LSGN 371
L GN
Sbjct: 356 LDGN 359
Score = 167 (63.8 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 76/308 (24%), Positives = 120/308 (38%)
Query: 237 LTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYS 296
L +L RL L+ + L TF + + L+EL + +N L L+PL L L +
Sbjct: 82 LGQLRRLDLQYNQIRSLHPKTFEKLSRLEELYLGNNLLQALAPGTLAPLRKLRILYANGN 141
Query: 297 NLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHE 356
+ R+SR +F + SL L L GN L L +F L +L L L + + L + F +
Sbjct: 142 EISRLSRGSFEGLESLVKLRLDGNALGALPDAVFAPLGNLLYLHLESNRIRFLGKNAFAQ 201
Query: 357 NYTYPDLEELRLSGNPLHV-LPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYT 415
L L LS N L L + +R++ + I + L L +F
Sbjct: 202 ---LGKLRFLNLSANELQPSLRHAATFAPLRSLSSLILSANN----LQHLGPRIFQH--- 251
Query: 416 YPDLEELRLSGNPL-HVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNL 474
P L L L GN L H+ P ++ LP + ++ +L+L
Sbjct: 252 LPRLGLLSLRGNQLTHLAPEAFWGLEALRELRLEGN---RLSQLPTALLEPLHSLEALDL 308
Query: 475 ANNNLSMTSELSFQFXXXXXXXXXXXXXXXXXTHISPTVLRHNRAITSIKLVGNPWKCDC 534
+ N LS +F +S + + A+ + L GN W CDC
Sbjct: 309 SGNELSALHPATFGHLGRLRELSLRNNALSA---LSGDIFAASPALYRLDLDGNGWTCDC 365
Query: 535 NIADMWEW 542
+ + W
Sbjct: 366 RLRGLKRW 373
>UNIPROTKB|F1NVW6 [details] [associations]
symbol:F1NVW6 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000902 "cell morphogenesis" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007599 "hemostasis"
evidence=IEA] [GO:0031362 "anchored to external side of plasma
membrane" evidence=IEA] [GO:0042730 "fibrinolysis" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0042730 InterPro:IPR003591
SMART:SM00369 GO:GO:0007155 InterPro:IPR000372 SMART:SM00013
GO:GO:0031362 GeneTree:ENSGT00690000102197 EMBL:AADN02063514
EMBL:AADN02063515 IPI:IPI00571680 ProteinModelPortal:F1NVW6
Ensembl:ENSGALT00000035204 OMA:LTENPWH Uniprot:F1NVW6
Length = 225
Score = 170 (64.9 bits), Expect = 4.1e-16, Sum P(2) = 4.1e-16
Identities = 64/189 (33%), Positives = 90/189 (47%)
Query: 142 TLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLK 201
T++ +S +P + NT + LN N L L V+T Q L L LDLS+ L+
Sbjct: 12 TVNCTGRDLSAVPAGL-PENTGILLLNA--NRL--LSVSTAAFQKLAALQDLDLSDNGLQ 66
Query: 202 GPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRF 261
L+E A + L+ L LS N L A AL+ L L RL+L + L L F
Sbjct: 67 AVLTEAALPS---LKELLLSHNALEALP---ALQGLPALTRLALAHNKLQALAPAAFRAV 120
Query: 262 TCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNK 321
LQ+LD+ N L L L+ LD+ + L+ + R + +L+TL LSGN+
Sbjct: 121 PQLQDLDLRGNALRTLPEDAFMGLRVLKDLDLSDNALEELPRGLLQDLVTLETLWLSGNR 180
Query: 322 LETLESGLF 330
L L SG F
Sbjct: 181 LRALPSGFF 189
Score = 143 (55.4 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 55/171 (32%), Positives = 75/171 (43%)
Query: 204 LSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTC 263
+S AF L+ L LS N L A L+ A P L L L + L LPA
Sbjct: 44 VSTAAFQKLAALQDLDLSDNGLQAV-LTEAALP--SLKELLLSHNALEALPA--LQGLPA 98
Query: 264 LQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLE 323
L L ++HN L A + L+ LD+ + L+ + F+ + LK L LS N LE
Sbjct: 99 LTRLALAHNKLQALAPAAFRAVPQLQDLDLRGNALRTLPEDAFMGLRVLKDLDLSDNALE 158
Query: 324 TLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLH 374
L GL Q+L L L L+ L L F E + + + L+ NP H
Sbjct: 159 ELPRGLLQDLVTLETLWLSGNRLRALPSGFFPEGHLFA---YVFLTENPWH 206
Score = 134 (52.2 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 58/204 (28%), Positives = 90/204 (44%)
Query: 21 TINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIE 80
T+N + V +L L L ++ F L L LDLS N L+ +
Sbjct: 12 TVNCTGRDLSAVPAGLPENTGILLLNANR--LLSVSTAAFQKLAALQDLDLSDNGLQAVL 69
Query: 81 PGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKL 140
L SL+ L+L+ N P A L L L L+ NKL++ + +L
Sbjct: 70 TEA--ALPSLKELLLSH-NALEALP-ALQGLPALTRLALAHNKLQALAP--AAFRAVPQL 123
Query: 141 DTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHL 200
LDLR + + LP++ F L++L+L++N L +L L Q+LV L++L LS L
Sbjct: 124 QDLDLRGNALRTLPEDAFMGLRVLKDLDLSDNALEELPRG--LLQDLVTLETLWLSGNRL 181
Query: 201 KGPLSEDAFVNATKLRTLYLSGNP 224
+ L F ++L+ NP
Sbjct: 182 RA-LPSGFFPEGHLFAYVFLTENP 204
Score = 132 (51.5 bits), Expect = 7.8e-09, Sum P(2) = 7.8e-09
Identities = 55/168 (32%), Positives = 77/168 (45%)
Query: 269 ISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESG 328
++ N L+ TA L +L+ LD+ + LQ + T + SLK L+LS N LE L +
Sbjct: 36 LNANRLLSVSTAAFQKLAALQDLDLSDNGLQAVL--TEAALPSLKELLLSHNALEALPA- 92
Query: 329 LFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQYSMRTI 388
Q L L+ L L + L L F P L++L L GN L LP+ +R +
Sbjct: 93 -LQGLPALTRLALAHNKLQALAPAAFR---AVPQLQDLDLRGNALRTLPEDAFM-GLRVL 147
Query: 389 PTQIWKNFDFLV-ILFILNETVFHENYTYPDLEELRLSGNPLHVLPTG 435
K+ D L L + + T LE L LSGN L LP+G
Sbjct: 148 -----KDLDLSDNALEELPRGLLQDLVT---LETLWLSGNRLRALPSG 187
Score = 65 (27.9 bits), Expect = 4.1e-16, Sum P(2) = 4.1e-16
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 525 LVGNPWKCDCNIADMWEWATREKGDI 550
L NPW CDC++ + W +G +
Sbjct: 200 LTENPWHCDCDLVYLRSWILGNEGSV 225
>UNIPROTKB|F1SGM5 [details] [associations]
symbol:LGR4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090190 "positive regulation of branching involved in
ureteric bud morphogenesis" evidence=IEA] [GO:0072282 "metanephric
nephron tubule morphogenesis" evidence=IEA] [GO:0072224
"metanephric glomerulus development" evidence=IEA] [GO:0072202
"cell differentiation involved in metanephros development"
evidence=IEA] [GO:0061290 "canonical Wnt receptor signaling pathway
involved in metanephric kidney development" evidence=IEA]
[GO:0050673 "epithelial cell proliferation" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0030539 "male genitalia
development" evidence=IEA] [GO:0016500 "protein-hormone receptor
activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002131 InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237
PRINTS:PR00373 PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021
GO:GO:0045892 GO:GO:0045893 InterPro:IPR003591 SMART:SM00369
GO:GO:0030539 GO:GO:0090190 GO:GO:0050673 GO:GO:0016500
GeneTree:ENSGT00650000092962 GO:GO:0061290 GO:GO:0072282
OMA:DGYWSDC GO:GO:0072202 GO:GO:0072224 EMBL:CU462866 EMBL:CU466955
Ensembl:ENSSSCT00000014563 Uniprot:F1SGM5
Length = 886
Score = 236 (88.1 bits), Expect = 4.2e-16, P = 4.2e-16
Identities = 92/344 (26%), Positives = 161/344 (46%)
Query: 19 LITINLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLR 77
L ++ L+AN I V E +F L +L++ + +L+++ Q +NL TL L L+ N +
Sbjct: 66 LQSLRLDANHITSVPEDSFEGLTQLRHLWLDDNSLTEVPVQPLSNLPTLQALTLALNKIS 125
Query: 78 IIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNL 137
I F L+SL L L+ + + FD L++L+TL+L+ N L ++ + L
Sbjct: 126 SIPDFAFTNLSSLVVLHLHNNKIKSLGQHCFDGLDNLETLDLNYNNLG---EFPQAIKAL 182
Query: 138 GKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSN 197
L L + IS +PD F N LR ++L +N L + +G + H S DL +
Sbjct: 183 PSLKELLFHSNSISVIPDGAFDGNPLLRTIHLYDNPL------SFVGNSAFHNLS-DLHS 235
Query: 198 CHLKGPLSEDAFVNAT---KLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLP 254
++G F N T L +L L+G +S+ ++ + L L L + LP
Sbjct: 236 LVIRGASMVQRFPNLTGTVHLESLTLTGTKISSISSNLCQEQ-KMLRTLDLSYNNIKDLP 294
Query: 255 ANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKT 314
+ F+ L+E+ + N + L SL LD+ + + I F K+ S+
Sbjct: 295 S--FNGCYALEEISLQRNQIHQIKEGTFQGLTSLRILDLSRNLIHEIHDRAFAKLGSITN 352
Query: 315 LILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENY 358
L +S N+L + + + L L+ L+L G +L E + +++
Sbjct: 353 LDISFNELTSFPT---EGLNGLNQLKL--VGNFKLKEALAAKDF 391
Score = 236 (88.1 bits), Expect = 4.2e-16, P = 4.2e-16
Identities = 95/365 (26%), Positives = 160/365 (43%)
Query: 17 PGLITINLNANPIQPVEGAFLVA-RSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNP 75
P L + L N + + L + L L +Q L + + L+ L L L N
Sbjct: 16 PFLEELRLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANH 75
Query: 76 LRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLG 135
+ + F+ LT L +L L+ +LT + NL L+ L L+ NK+ S D+
Sbjct: 76 ITSVPEDSFEGLTQLRHLWLDDNSLTEVPVQPLSNLPTLQALTLALNKISSIPDFAFT-- 133
Query: 136 NLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDL 195
NL L L L + I +L + F L L+L N L + A +L L L
Sbjct: 134 NLSSLVVLHLHNNKIKSLGQHCFDGLDNLETLDLNYNNLGEFPQAIKALPSLKEL----L 189
Query: 196 SNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGL-SRLP 254
+ + + + AF LRT++L NPLS S A L+ LH L +R + R P
Sbjct: 190 FHSNSISVIPDGAFDGNPLLRTIHLYDNPLSFVGNS-AFHNLSDLHSLVIRGASMVQRFP 248
Query: 255 --ANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSL 312
T H L+ L ++ + + L + L LD+ Y+N++ + +F +L
Sbjct: 249 NLTGTVH----LESLTLTGTKISSISSNLCQEQKMLRTLDLSYNNIKDLP--SFNGCYAL 302
Query: 313 KTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNP 372
+ + L N++ ++ G FQ LT L +L+L+ + +++ F + + +L+ +S N
Sbjct: 303 EEISLQRNQIHQIKEGTFQGLTSLRILDLSRNLIHEIHDRAFAKLGSITNLD---ISFNE 359
Query: 373 LHVLP 377
L P
Sbjct: 360 LTSFP 364
Score = 224 (83.9 bits), Expect = 8.4e-15, P = 8.4e-15
Identities = 108/391 (27%), Positives = 170/391 (43%)
Query: 52 LSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNL 111
++++ F N L +L L+GN L I P L L+ L L L + A L
Sbjct: 4 ITQLPEDAFKNFPFLEELRLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAIRGL 63
Query: 112 NHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAE 171
+ L++L L N + S + + L +L L L + ++ +P +N L+ L LA
Sbjct: 64 SALQSLRLDANHITSVPEDSFE--GLTQLRHLWLDDNSLTEVPVQPLSNLPTLQALTLAL 121
Query: 172 NELIDL-DVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADL 230
N++ + D A T NL L L L N +K L + F L TL L+ N L +
Sbjct: 122 NKISSIPDFAFT---NLSSLVVLHLHNNKIKS-LGQHCFDGLDNLETLDLNYNNLG--EF 175
Query: 231 SVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEH 290
A+K L L L + +S +P F L+ + + NPL + L L
Sbjct: 176 PQAIKALPSLKELLFHSNSISVIPDGAFDGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHS 235
Query: 291 LDM-GYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRL 349
L + G S +QR T L++L L+G K+ ++ S L Q L L+L+ + L
Sbjct: 236 LVIRGASMVQRFPNLT--GTVHLESLTLTGTKISSISSNLCQEQKMLRTLDLSYNNIKDL 293
Query: 350 NETVFHENYTYPDLEELRLSGNPLHVLPDSTKQ--YSMRTIPTQ---IWKNFD--FLVIL 402
F+ Y LEE+ L N +H + + T Q S+R + I + D F +
Sbjct: 294 PS--FNGCYA---LEEISLQRNQIHQIKEGTFQGLTSLRILDLSRNLIHEIHDRAFAKLG 348
Query: 403 FILNETV-FHENYTYPD-----LEELRLSGN 427
I N + F+E ++P L +L+L GN
Sbjct: 349 SITNLDISFNELTSFPTEGLNGLNQLKLVGN 379
Score = 208 (78.3 bits), Expect = 4.6e-13, P = 4.6e-13
Identities = 99/353 (28%), Positives = 156/353 (44%)
Query: 27 NPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDP 86
N Q E AF L L + LS I+P+ + L L L L N L+ +
Sbjct: 3 NITQLPEDAFKNFPFLEELRLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAIRG 62
Query: 87 LTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLR 146
L++L+ L L+ ++T + +F+ L L+ L L N L + + L NL L L L
Sbjct: 63 LSALQSLRLDANHITSVPEDSFEGLTQLRHLWLDDNSL-TEVP-VQPLSNLPTLQALTLA 120
Query: 147 QSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSE 206
+ IS++PD F N + L L+L N++ L G L +L++LDL+ +L G +
Sbjct: 121 LNKISSIPDFAFTNLSSLVVLHLHNNKIKSLGQHCFDG--LDNLETLDLNYNNL-GEFPQ 177
Query: 207 DAFVNATKLRTLYLSGNPLSAA-DLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQ 265
A L+ L N +S D + PL L + L + LS + + FH + L
Sbjct: 178 -AIKALPSLKELLFHSNSISVIPDGAFDGNPL--LRTIHLYDNPLSFVGNSAFHNLSDLH 234
Query: 266 ELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETL 325
L I ++ F L + LE L + + + IS + + L+TL LS N ++ L
Sbjct: 235 SLVIRGASMVQRFPNLTGTVH-LESLTLTGTKISSISSNLCQEQKMLRTLDLSYNNIKDL 293
Query: 326 ESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPD 378
S F L + L + ++ E F + T L L LS N +H + D
Sbjct: 294 PS--FNGCYALEEISLQRNQIHQIKEGTF-QGLT--SLRILDLSRNLIHEIHD 341
Score = 188 (71.2 bits), Expect = 6.8e-11, P = 6.8e-11
Identities = 90/326 (27%), Positives = 137/326 (42%)
Query: 74 NPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLV 133
N + + F LE L L +L++I P A L LK L L N+LK+ + +
Sbjct: 2 NNITQLPEDAFKNFPFLEELRLAGNDLSFIHPKALSGLKELKVLTLQNNQLKT-VPSEAI 60
Query: 134 LGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSL 193
G L L +L L + I+++P++ F T LR+L L +N L ++ V NL L +L
Sbjct: 61 RG-LSALQSLRLDANHITSVPEDSFEGLTQLRHLWLDDNSLTEVPVQPL--SNLPTLQAL 117
Query: 194 DLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRL 253
L+ + + + AF N + L L+L N + + L L L L L
Sbjct: 118 TLALNKISS-IPDFAFTNLSSLVVLHLHNNKIKSLGQH-CFDGLDNLETLDLNYNNLGEF 175
Query: 254 PANTFHRFTCLQELDISHNPLI---D-AFTALLSPLESLEHLDMGYSN-LQRISRSTFLK 308
P L+EL N + D AF +PL HL Y N L + S F
Sbjct: 176 P-QAIKALPSLKELLFHSNSISVIPDGAFDG--NPLLRTIHL---YDNPLSFVGNSAFHN 229
Query: 309 MTSLKTLILSGNKLETLESGLFQNLT---HLSVLELNNCGLTRLNETVFHENYTYPDLEE 365
++ L +L++ G + F NLT HL L L ++ ++ + E L
Sbjct: 230 LSDLHSLVIRGASMVQR----FPNLTGTVHLESLTLTGTKISSISSNLCQEQKM---LRT 282
Query: 366 LRLSGNPLHVLPDSTKQYSMRTIPTQ 391
L LS N + LP Y++ I Q
Sbjct: 283 LDLSYNNIKDLPSFNGCYALEEISLQ 308
Score = 169 (64.5 bits), Expect = 7.7e-09, P = 7.7e-09
Identities = 75/297 (25%), Positives = 127/297 (42%)
Query: 185 QNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLS 244
+N L+ L L+ L + A +L+ L L N L S A++ L+ L L
Sbjct: 13 KNFPFLEELRLAGNDLSF-IHPKALSGLKELKVLTLQNNQLKTVP-SEAIRGLSALQSLR 70
Query: 245 LRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRS 304
L ++ +P ++F T L+ L + N L + LS L +L+ L + + + I
Sbjct: 71 LDANHITSVPEDSFEGLTQLRHLWLDDNSLTEVPVQPLSNLPTLQALTLALNKISSIPDF 130
Query: 305 TFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLE 364
F ++SL L L NK+++L F L +L L+LN L + + P L+
Sbjct: 131 AFTNLSSLVVLHLHNNKIKSLGQHCFDGLDNLETLDLNYNNLGEFPQAI----KALPSLK 186
Query: 365 ELRLSGNPLHVLPDSTKQYS--MRTIPTQIWKNFDFLVILFILNETVFHENYTYPDLEEL 422
EL N + V+PD + +RTI ++ N + F+ N + FH N + DL L
Sbjct: 187 ELLFHSNSISVIPDGAFDGNPLLRTI--HLYDN----PLSFVGN-SAFH-NLS--DLHSL 236
Query: 423 RLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNL 479
+ G + V N KI + N+ + + +L+L+ NN+
Sbjct: 237 VIRGASM-VQRFPNLTGTVHLESLTLTGT--KISSISSNLCQEQKMLRTLDLSYNNI 290
Score = 155 (59.6 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 82/358 (22%), Positives = 142/358 (39%)
Query: 136 NLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDL 195
N L+ L L + +S + + L+ L L N+L + G L L SL L
Sbjct: 14 NFPFLEELRLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAIRG--LSALQSLRL 71
Query: 196 SNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPA 255
H+ + ED+F T+LR L+L N L+ + L L L L+L +S +P
Sbjct: 72 DANHITS-VPEDSFEGLTQLRHLWLDDNSLTEVPVQ-PLSNLPTLQALTLALNKISSIPD 129
Query: 256 NTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTL 315
F + L L + +N + L++LE LD+ Y+NL ++ + SLK L
Sbjct: 130 FAFTNLSSLVVLHLHNNKIKSLGQHCFDGLDNLETLDLNYNNLGEFPQA-IKALPSLKEL 188
Query: 316 ILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSG-NPLH 374
+ N + + G F L + L + L+ + + FH N + DL L + G + +
Sbjct: 189 LFHSNSISVIPDGAFDGNPLLRTIHLYDNPLSFVGNSAFH-NLS--DLHSLVIRGASMVQ 245
Query: 375 VLPDSTKQYSMRTIP------TQIWKNFDFLVILFILNETVFHENYTYPD------LEEL 422
P+ T + ++ + I N + + ++ P LEE+
Sbjct: 246 RFPNLTGTVHLESLTLTGTKISSISSNLCQEQKMLRTLDLSYNNIKDLPSFNGCYALEEI 305
Query: 423 RLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNLS 480
L N +H + G I + F +IT+L+++ N L+
Sbjct: 306 SLQRNQIHQIKEGTFQGLTSLRILDLSRNL--IHEIHDRAFAKLGSITNLDISFNELT 361
>ZFIN|ZDB-GENE-050208-523 [details] [associations]
symbol:shoc2 "soc-2 suppressor of clear homolog (C.
elegans)" species:7955 "Danio rerio" [GO:0000164 "protein
phosphatase type 1 complex" evidence=IEA;ISS] [GO:0046579 "positive
regulation of Ras protein signal transduction" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0019903 "protein
phosphatase binding" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR027036
PROSITE:PS51450 ZFIN:ZDB-GENE-050208-523 GO:GO:0005634
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875
Pfam:PF12799 GO:GO:0046579 EMBL:CR450802 GO:GO:0019903
GO:GO:0000164 HOGENOM:HOG000116557 GeneTree:ENSGT00600000084236
CTD:8036 OMA:LPHGIGN OrthoDB:EOG408N7W PANTHER:PTHR23155:SF38
EMBL:AL772158 EMBL:BC125839 EMBL:BC155579 IPI:IPI00487368
IPI:IPI00817688 RefSeq:NP_001038251.1 UniGene:Dr.68831
ProteinModelPortal:Q1L8Y7 Ensembl:ENSDART00000059882
Ensembl:ENSDART00000125215 GeneID:555476 KEGG:dre:555476
InParanoid:Q1L8Y7 NextBio:20880997 Bgee:Q1L8Y7 Uniprot:Q1L8Y7
Length = 561
Score = 232 (86.7 bits), Expect = 4.9e-16, P = 4.9e-16
Identities = 120/445 (26%), Positives = 200/445 (44%)
Query: 57 PQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKT 116
P LT L +L L N L+ + P V L+ L L L+ +LT + P + DNL L+
Sbjct: 95 PSSIKELTQLTELYLYSNKLQSLPPEV-GCLSGLVTLALSENSLTSL-PDSLDNLKKLRM 152
Query: 117 LELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELID 176
L+L NKL+ + V+ + L TL LR + I+ + ++ N + L L++ EN++
Sbjct: 153 LDLRHNKLR---EIPAVVYRVSSLTTLYLRFNRITTVEKDI-KNLSKLTMLSIRENKIKQ 208
Query: 177 LDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKP 236
L +G+ L +L +LD+++ L+ E N T++ L L N L DL +
Sbjct: 209 LPAE--IGE-LCNLITLDVAHNQLEHLPKEIG--NCTQITNLDLQHNDL--LDLPETIGN 261
Query: 237 LTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYS 296
L ++RL LR LS +P + + L+EL++ +N + LLS L +L L + +
Sbjct: 262 LASINRLGLRYNRLSAIP-RSLAKCRELEELNLENNNISVLPEGLLSSLVNLTSLTLARN 320
Query: 297 NLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHE 356
Q + +++ +L + N++ + G+F LS L + + LT L F
Sbjct: 321 CFQSYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSL-PLDFG- 378
Query: 357 NYTYPDLEELRLSGNPLHVLPDST---KQYSMRTIPTQIWKNFDFLV-ILFILNETVFHE 412
T+ + EL L+ N L +P+ M T+ + K + + L L E E
Sbjct: 379 --TWTSMVELNLATNQLTKIPEDICGLVSLEMLTLSNNLLKKLPYGIGNLRKLRELDLEE 436
Query: 413 NY--TYP-------DLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVF 463
N + P DL++L L+ N L LP G + +LP +
Sbjct: 437 NKLESLPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTYLGLGENL---LQHLPEEI- 492
Query: 464 NNTRNITSLNLANN-NL-SMTSELS 486
N+ L L +N NL S+ EL+
Sbjct: 493 GTLENLEDLYLNDNPNLHSLPFELA 517
Score = 179 (68.1 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 100/391 (25%), Positives = 163/391 (41%)
Query: 102 YISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANN 161
++ PS+ L L L L NKL+S +G L L TL L ++ +++LPD++ N
Sbjct: 92 HLLPSSIKELTQLTELYLYSNKLQS---LPPEVGCLSGLVTLALSENSLTSLPDSL-DNL 147
Query: 162 TWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLS 221
LR L+L N+L ++ + L +L L + + +D N +KL L +
Sbjct: 148 KKLRMLDLRHNKLREIPAVV---YRVSSLTTLYLRFNRIT-TVEKD-IKNLSKLTMLSIR 202
Query: 222 GNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTAL 281
N + L + L L L + + L LP T + LD+ HN L+D
Sbjct: 203 ENKIK--QLPAEIGELCNLITLDVAHNQLEHLPKE-IGNCTQITNLDLQHNDLLD-LPET 258
Query: 282 LSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLEL 341
+ L S+ L + Y+ L I RS K L+ L L N + L GL +L +L+ L L
Sbjct: 259 IGNLASINRLGLRYNRLSAIPRS-LAKCRELEELNLENNNISVLPEGLLSSLVNLTSLTL 317
Query: 342 -NNC-------GLTRLNETVFHENYTYPDLEELRLS-GNPLHVLPD-STKQYSMRTIPTQ 391
NC G ++ + T++ N + + ++ + VL + K + ++P
Sbjct: 318 ARNCFQSYPVGGPSQFS-TIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLD 376
Query: 392 IWKNFDFLVILFILNE-TVFHENYT-YPDLEELRLSGNPLHVLPTGNXXXXXXXXXXXXX 449
+ + N+ T E+ LE L LS N L LP G
Sbjct: 377 FGTWTSMVELNLATNQLTKIPEDICGLVSLEMLTLSNNLLKKLPYGIGNLRKLRELDLEE 436
Query: 450 XXXCKIDYLPPNVFNNTRNITSLNLANNNLS 480
K++ LP N +++ L L NN L+
Sbjct: 437 N---KLESLP-NEIAYLKDLQKLVLTNNQLT 463
Score = 178 (67.7 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 87/335 (25%), Positives = 148/335 (44%)
Query: 19 LITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRI 78
LIT+++ N ++ + + L +Q L + P+ NL ++N+L L N L
Sbjct: 219 LITLDVAHNQLEHLPKEIGNCTQITNLDLQHNDLLDL-PETIGNLASINRLGLRYNRLSA 277
Query: 79 IEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLG 138
I P LE L L N++ + +L +L +L L++N +S+ +G
Sbjct: 278 I-PRSLAKCRELEELNLENNNISVLPEGLLSSLVNLTSLTLARNCFQSY-----PVGGPS 331
Query: 139 KLDT---LDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDL 195
+ T L++ + I+ +P +F+ L LN+ +N+L L + ++V L+
Sbjct: 332 QFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLA-- 389
Query: 196 SNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPA 255
+N K P ED L L LS N L L + L KL L L L LP
Sbjct: 390 TNQLTKIP--ED-ICGLVSLEMLTLSNNLLKK--LPYGIGNLRKLRELDLEENKLESLP- 443
Query: 256 NTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTL 315
N LQ+L +++N L + L +L +L +G + LQ + + +L+ L
Sbjct: 444 NEIAYLKDLQKLVLTNNQLT-TLPRGIGHLTNLTYLGLGENLLQHLPEEIGT-LENLEDL 501
Query: 316 ILSGN-KLETLESGLFQNLTHLSVLELNNCGLTRL 349
L+ N L +L L + LS++ + NC L+ L
Sbjct: 502 YLNDNPNLHSLPFELAL-CSKLSIMSIENCPLSHL 535
Score = 174 (66.3 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 78/245 (31%), Positives = 116/245 (47%)
Query: 13 NLDNPGLITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLS 72
+L N +T+ N PV G + ++ L M+ ++KI F+ L+KL++
Sbjct: 308 SLVNLTSLTLARNCFQSYPVGGPSQFS-TIYSLNMEHNRINKIPFGIFSRAKVLSKLNMK 366
Query: 73 GNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTL 132
N L + P F TS+ L L LT I P L L+ L LS N LK + + +
Sbjct: 367 DNQLTSL-PLDFGTWTSMVELNLATNQLTKI-PEDICGLVSLEMLTLSNNLLKK-LPYGI 423
Query: 133 VLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDS 192
GNL KL LDL ++ + +LP+ + A L+ L L N+L TTL + + HL +
Sbjct: 424 --GNLRKLRELDLEENKLESLPNEI-AYLKDLQKLVLTNNQL------TTLPRGIGHLTN 474
Query: 193 LDLSNC--HLKGPLSEDAFVNATKLRTLYLSGNP-LSAADLSVALKPLTKLHRLSLRNCG 249
L +L L E+ L LYL+ NP L + +AL +KL +S+ NC
Sbjct: 475 LTYLGLGENLLQHLPEE-IGTLENLEDLYLNDNPNLHSLPFELAL--CSKLSIMSIENCP 531
Query: 250 LSRLP 254
LS LP
Sbjct: 532 LSHLP 536
>UNIPROTKB|F1LN28 [details] [associations]
symbol:Slit2 "Slit homolog 2 protein" species:10116 "Rattus
norvegicus" [GO:0004963 "follicle-stimulating hormone receptor
activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001611 InterPro:IPR002272 PRINTS:PR01143
PROSITE:PS51450 RGD:69310 GO:GO:0016021 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0042699
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0004963
Pfam:PF01463 IPI:IPI00951919 Ensembl:ENSRNOT00000065056
ArrayExpress:F1LN28 Uniprot:F1LN28
Length = 680
Score = 188 (71.2 bits), Expect = 5.3e-16, Sum P(2) = 5.3e-16
Identities = 84/334 (25%), Positives = 136/334 (40%)
Query: 22 INLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIE 80
+ LN N +Q E FL L L + E + I + F + L L N + IE
Sbjct: 22 LRLNRNNLQLFPELLFLGTAKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIE 81
Query: 81 PGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKL--KSHI----DWTLVL 134
G F L LE L LN N+T +S ++F+++ L+T L N L H+ DW
Sbjct: 82 DGAFRALRDLEVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQR 141
Query: 135 GNLGK----LDTLDLRQSGISNLPDNVFANNTWLRNLN--LAEN-ELIDLDVATTLGQNL 187
+G + LR ++ + F + ++ +A + ++ +A T N+
Sbjct: 142 PRVGLYTQCMGPSHLRGHNVAEVQKREFVCSGPEKSHQSFMAPSCSVLHCPIACTCSNNI 201
Query: 188 VHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRN 247
V +C KG L+E + + L N + A P KL RL L N
Sbjct: 202 V--------DCRGKG-LTEIPTNLPETITEIRLEQNSIRVIPPG-AFSPYKKLRRLDLSN 251
Query: 248 CGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFL 307
+S L + F L L + N + + +L L SL+ L + + + + F
Sbjct: 252 NQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQ 311
Query: 308 KMTSLKTLILSGNKLETLESGLFQNLTHLSVLEL 341
+ +L L L NKL+T+ G F L + + L
Sbjct: 312 DLHNLNLLSLYDNKLQTVAKGTFSALRAIQTMHL 345
Score = 167 (63.8 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 88/350 (25%), Positives = 138/350 (39%)
Query: 49 ECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAF 108
E +S I F +L L +L L+ N L++ +F L L L+ + I AF
Sbjct: 2 ENKISTIERGAFQDLKELERLRLNRNNLQLFPELLFLGTAKLYRLDLSENQIQAIPRKAF 61
Query: 109 DNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLN 168
+K L+L N++ D L L+ L L + I+ L F + LR
Sbjct: 62 RGAVDIKNLQLDYNQISCIEDGAFRA--LRDLEVLTLNNNNITRLSVASFNHMPKLRTFR 119
Query: 169 LAENELI-DLDVATT---LGQN-LVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGN 223
L N L D +A L Q V L + + HL+G + S
Sbjct: 120 LHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPSHLRGHNVAEVQKREFVCSGPEKSHQ 179
Query: 224 PLSAADLSVALKPLTKLHRLSLRNC---GLSRLPANTFHRFTCLQELDISHNPLIDAFTA 280
A SV P+ ++ +C GL+ +P N T E+ + N +
Sbjct: 180 SFMAPSCSVLHCPIACTCSNNIVDCRGKGLTEIPTNLPETIT---EIRLEQNSIRVIPPG 236
Query: 281 LLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLE 340
SP + L LD+ + + ++ F + SL +L+L GNK+ L LF+ L L +L
Sbjct: 237 AFSPYKKLRRLDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLL 296
Query: 341 LNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPT 390
LN + L F + + +L L L N L + T ++R I T
Sbjct: 297 LNANKINCLRVDAFQDLH---NLNLLSLYDNKLQTVAKGTFS-ALRAIQT 342
Score = 141 (54.7 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 43/134 (32%), Positives = 67/134 (50%)
Query: 17 PGLIT-INLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGN 74
P IT I L N I+ + GAF + L L + +S++ P F L +LN L L GN
Sbjct: 217 PETITEIRLEQNSIRVIPPGAFSPYKKLRRLDLSNNQISELAPDAFQGLRSLNSLVLYGN 276
Query: 75 PLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVL 134
+ + +F+ L SL+ L+LN + + AF +L++L L L NKL++ T
Sbjct: 277 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTVAKGTF-- 334
Query: 135 GNLGKLDTLDLRQS 148
L + T+ L Q+
Sbjct: 335 SALRAIQTMHLAQN 348
Score = 110 (43.8 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 36/140 (25%), Positives = 66/140 (47%)
Query: 218 LYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDA 277
L L+ N + + + K L +L +++L N ++ + F + + E+ ++ N L +
Sbjct: 448 LRLNNNEFTVLEATGIFKKLPQLRKINLSNNKITDIEEGAFEGASGVNEILLTSNRLENV 507
Query: 278 FTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLS 337
+ LESL+ L + + + + +F + S++ L L N++ T+ G F L LS
Sbjct: 508 QHKMFKGLESLKTLMLRSNRISCVGNDSFTGLGSVRLLSLYDNQITTVAPGAFGTLHSLS 567
Query: 338 VLEL--N----NCGLTRLNE 351
L L N NC L L E
Sbjct: 568 TLNLLANPFNCNCHLAWLGE 587
Score = 107 (42.7 bits), Expect = 1.8e-11, Sum P(3) = 1.8e-11
Identities = 40/141 (28%), Positives = 66/141 (46%)
Query: 136 NLGKLDT-LDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLD 194
NL + T + L Q+ I +P F+ LR L+L+ N++ +L A Q L L+SL
Sbjct: 215 NLPETITEIRLEQNSIRVIPPGAFSPYKKLRRLDLSNNQISEL--APDAFQGLRSLNSLV 272
Query: 195 LSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLP 254
L + L + F L+ L L+ N ++ + A + L L+ LSL + L +
Sbjct: 273 LYGNKIT-ELPKSLFEGLFSLQLLLLNANKINCLRVD-AFQDLHNLNLLSLYDNKLQTVA 330
Query: 255 ANTFHRFTCLQELDISHNPLI 275
TF +Q + ++ NP I
Sbjct: 331 KGTFSALRAIQTMHLAQNPFI 351
Score = 105 (42.0 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 76/320 (23%), Positives = 137/320 (42%)
Query: 19 LITINLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLR 77
L ++L+ N IQ + AF A + L + +S I F L L L L+ N +
Sbjct: 43 LYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNIT 102
Query: 78 IIEPGVFDPLTSLEYLMLNRCNLTYISPSAF--DNLNHLKTLEL-SQNKLKSHIDWTLVL 134
+ F+ + L L+ NL A+ D L + L +Q SH+
Sbjct: 103 RLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPSHLRGH--- 159
Query: 135 GNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLA---ENELIDL------DVATTLGQ 185
N+ ++ + SG + A + + + +A N ++D ++ T L +
Sbjct: 160 -NVAEVQKREFVCSGPEKSHQSFMAPSCSVLHCPIACTCSNNIVDCRGKGLTEIPTNLPE 218
Query: 186 NLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSV-ALKPLTKLHRLS 244
+ + L+ ++ + P AF KLR L LS N +S +L+ A + L L+ L
Sbjct: 219 TITEI-RLEQNSIRVIPP---GAFSPYKKLRRLDLSNNQIS--ELAPDAFQGLRSLNSLV 272
Query: 245 LRNCGLSRLPANTFHRFTCLQELDISHNPL----IDAFTALLSPLESLEHLDMGYSNLQR 300
L ++ LP + F LQ L ++ N + +DAF L +L L + + LQ
Sbjct: 273 LYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAF----QDLHNLNLLSLYDNKLQT 328
Query: 301 ISRSTFLKMTSLKTLILSGN 320
+++ TF + +++T+ L+ N
Sbjct: 329 VAKGTFSALRAIQTMHLAQN 348
Score = 95 (38.5 bits), Expect = 5.3e-16, Sum P(2) = 5.3e-16
Identities = 37/180 (20%), Positives = 73/180 (40%)
Query: 369 SGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNET-VFHENYTYPDLEELRLSGN 427
S L+ +PD QY T ++ N +F V L T +F + P L ++ LS N
Sbjct: 430 SNQKLNKIPDHIPQY---TAELRL-NNNEFTV----LEATGIFKK---LPQLRKINLSNN 478
Query: 428 PLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSF 487
+ + G +++ + +F ++ +L L +N +S SF
Sbjct: 479 KITDIEEGAFEGASGVNEILLTSN--RLENVQHKMFKGLESLKTLMLRSNRISCVGNDSF 536
Query: 488 QFXXXXXXXXXXXXXXXXXTHISPTVLRHNRAITSIKLVGNPWKCDCNIADMWEWATREK 547
T ++P +++++ L+ NP+ C+C++A + EW R++
Sbjct: 537 ---TGLGSVRLLSLYDNQITTVAPGAFGTLHSLSTLNLLANPFNCNCHLAWLGEWLRRKR 593
Score = 93 (37.8 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 31/133 (23%), Positives = 58/133 (43%)
Query: 243 LSLRNCGLSRLPAN-TFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRI 301
L L N + L A F + L+++++S+N + D + + + + L+ +
Sbjct: 448 LRLNNNEFTVLEATGIFKKLPQLRKINLSNNKITDIEEGAFEGASGVNEILLTSNRLENV 507
Query: 302 SRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYP 361
F + SLKTL+L N++ + + F L + +L L + +T + F T
Sbjct: 508 QHKMFKGLESLKTLMLRSNRISCVGNDSFTGLGSVRLLSLYDNQITTVAPGAFG---TLH 564
Query: 362 DLEELRLSGNPLH 374
L L L NP +
Sbjct: 565 SLSTLNLLANPFN 577
Score = 85 (35.0 bits), Expect = 1.8e-11, Sum P(3) = 1.8e-11
Identities = 28/99 (28%), Positives = 42/99 (42%)
Query: 27 NPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFD 85
N I +E GAF + L L + L F L +LDLS N ++ I F
Sbjct: 3 NKISTIERGAFQDLKELERLRLNRNNLQLFPELLFLGTAKLYRLDLSENQIQAIPRKAFR 62
Query: 86 PLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKL 124
++ L L+ ++ I AF L L+ L L+ N +
Sbjct: 63 GAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNI 101
Score = 53 (23.7 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 9/19 (47%), Positives = 14/19 (73%)
Query: 518 RAITSIKLVGNPWKCDCNI 536
RAI ++ L NP+ CDC++
Sbjct: 338 RAIQTMHLAQNPFICDCHL 356
>RGD|69310 [details] [associations]
symbol:Slit2 "slit homolog 2 (Drosophila)" species:10116 "Rattus
norvegicus" [GO:0001656 "metanephros development" evidence=ISO]
[GO:0001657 "ureteric bud development" evidence=ISO] [GO:0001701 "in
utero embryonic development" evidence=ISO] [GO:0001933 "negative
regulation of protein phosphorylation" evidence=ISO] [GO:0002042
"cell migration involved in sprouting angiogenesis" evidence=ISO]
[GO:0002689 "negative regulation of leukocyte chemotaxis"
evidence=ISO] [GO:0004963 "follicle-stimulating hormone receptor
activity" evidence=IEA] [GO:0005095 "GTPase inhibitor activity"
evidence=ISO] [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005615 "extracellular
space" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0006935 "chemotaxis"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=ISO] [GO:0007411
"axon guidance" evidence=ISO] [GO:0007420 "brain development"
evidence=IEP] [GO:0008045 "motor neuron axon guidance" evidence=ISO]
[GO:0008201 "heparin binding" evidence=IEA;ISO] [GO:0008285
"negative regulation of cell proliferation" evidence=ISO]
[GO:0009986 "cell surface" evidence=ISO] [GO:0010593 "negative
regulation of lamellipodium assembly" evidence=ISO] [GO:0010596
"negative regulation of endothelial cell migration" evidence=ISO]
[GO:0010629 "negative regulation of gene expression" evidence=ISO]
[GO:0014912 "negative regulation of smooth muscle cell migration"
evidence=ISO] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016337 "cell-cell adhesion" evidence=ISO] [GO:0021510 "spinal
cord development" evidence=IEP] [GO:0021772 "olfactory bulb
development" evidence=ISO] [GO:0021836 "chemorepulsion involved in
postnatal olfactory bulb interneuron migration" evidence=ISO]
[GO:0021972 "corticospinal neuron axon guidance through spinal cord"
evidence=ISO] [GO:0022029 "telencephalon cell migration"
evidence=ISO] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0030336 "negative regulation of cell migration" evidence=ISO]
[GO:0030837 "negative regulation of actin filament polymerization"
evidence=ISO] [GO:0031290 "retinal ganglion cell axon guidance"
evidence=ISO] [GO:0031667 "response to nutrient levels"
evidence=IEP] [GO:0032870 "cellular response to hormone stimulus"
evidence=ISO] [GO:0033563 "dorsal/ventral axon guidance"
evidence=ISO] [GO:0035385 "Roundabout signaling pathway"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=ISO] [GO:0043065 "positive regulation of apoptotic process"
evidence=ISO] [GO:0043116 "negative regulation of vascular
permeability" evidence=ISO] [GO:0043237 "laminin-1 binding"
evidence=ISO] [GO:0043394 "proteoglycan binding" evidence=ISO]
[GO:0043395 "heparan sulfate proteoglycan binding" evidence=IDA]
[GO:0045499 "chemorepellent activity" evidence=ISO] [GO:0048495
"Roundabout binding" evidence=ISO] [GO:0048754 "branching
morphogenesis of an epithelial tube" evidence=ISO] [GO:0048812
"neuron projection morphogenesis" evidence=ISO] [GO:0048846 "axon
extension involved in axon guidance" evidence=ISO] [GO:0050728
"negative regulation of inflammatory response" evidence=IMP]
[GO:0050919 "negative chemotaxis" evidence=ISO] [GO:0050929
"induction of negative chemotaxis" evidence=ISO] [GO:0051058
"negative regulation of small GTPase mediated signal transduction"
evidence=ISO] [GO:0051414 "response to cortisol stimulus"
evidence=ISO] [GO:0060603 "mammary gland duct morphogenesis"
evidence=ISO] [GO:0060763 "mammary duct terminal end bud growth"
evidence=ISO] [GO:0061364 "apoptotic process involved in luteolysis"
evidence=ISO] [GO:0070100 "negative regulation of chemokine-mediated
signaling pathway" evidence=ISO] [GO:0071504 "cellular response to
heparin" evidence=ISO] [GO:0071672 "negative regulation of smooth
muscle cell chemotaxis" evidence=ISO] [GO:0071676 "negative
regulation of mononuclear cell migration" evidence=ISO] [GO:0090024
"negative regulation of neutrophil chemotaxis" evidence=ISO]
[GO:0090027 "negative regulation of monocyte chemotaxis"
evidence=IDA] [GO:0090260 "negative regulation of retinal ganglion
cell axon guidance" evidence=ISO] [GO:0090288 "negative regulation
of cellular response to growth factor stimulus" evidence=ISO]
[GO:0021834 "chemorepulsion involved in embryonic olfactory bulb
interneuron precursor migration" evidence=ISO] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR002272 PRINTS:PR01143 PROSITE:PS51450
RGD:69310 GO:GO:0016021 GO:GO:0005886 GO:GO:0005576 GO:GO:0007420
GO:GO:0030154 GO:GO:0050728 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0008201
GO:GO:0006935 GO:GO:0031667 GO:GO:0042699 GO:GO:0043395
GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0004963 Pfam:PF01463 GO:GO:0090027 HOVERGEN:HBG057959
EMBL:AF141386 IPI:IPI00361914 UniGene:Rn.146652
ProteinModelPortal:Q9WVC1 SMR:Q9WVC1 IntAct:Q9WVC1 STRING:Q9WVC1
PRIDE:Q9WVC1 HOGENOM:HOG000170672 InParanoid:Q9WVC1
ArrayExpress:Q9WVC1 Genevestigator:Q9WVC1
GermOnline:ENSRNOG00000003840 Uniprot:Q9WVC1
Length = 766
Score = 189 (71.6 bits), Expect = 5.9e-16, Sum P(2) = 5.9e-16
Identities = 83/334 (24%), Positives = 132/334 (39%)
Query: 22 INLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIE 80
+ LN N +Q E FL L L + E + I + F + L L N + IE
Sbjct: 108 LRLNRNNLQLFPELLFLGTAKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIE 167
Query: 81 PGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKL--KSHI----DWTLVL 134
G F L LE L LN N+T +S ++F+++ L+T L N L H+ DW
Sbjct: 168 DGAFRALRDLEVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQR 227
Query: 135 GNLGK----LDTLDLRQSGISNLPDNVFA---NNTWLRNLNLAENELIDLDVATTLGQNL 187
+G + LR ++ + F ++ ++ +A T N+
Sbjct: 228 PRVGLYTQCMGPSHLRGHNVAEVQKREFVCSDEEEGHQSFMAPSCSVLHCPIACTCSNNI 287
Query: 188 VHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRN 247
V +C KG L+E + + L N + A P KL RL L N
Sbjct: 288 V--------DCRGKG-LTEIPTNLPETITEIRLEQNSIRVIPPG-AFSPYKKLRRLDLSN 337
Query: 248 CGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFL 307
+S L + F L L + N + + +L L SL+ L + + + + F
Sbjct: 338 NQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQ 397
Query: 308 KMTSLKTLILSGNKLETLESGLFQNLTHLSVLEL 341
+ +L L L NKL+T+ G F L + + L
Sbjct: 398 DLHNLNLLSLYDNKLQTVAKGTFSALRAIQTMHL 431
Score = 183 (69.5 bits), Expect = 2.7e-15, Sum P(2) = 2.7e-15
Identities = 96/379 (25%), Positives = 154/379 (40%)
Query: 22 INLNANPIQPVEGA-FLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIE 80
++LN N I + F R L L + E +S I F +L L +L L+ N L++
Sbjct: 60 LDLNGNNITRITKTDFAGLRHLRILQLMENKISTIERGAFHDLKELERLRLNRNNLQLFP 119
Query: 81 PGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKL 140
+F L L L+ + I AF +K L+L N++ D L L
Sbjct: 120 ELLFLGTAKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRA--LRDL 177
Query: 141 DTLDLRQSGISNLPDNVFANNTWLRNLNLAENELI-DLDVATT---LGQN-LVHLDSLDL 195
+ L L + I+ L F + LR L N L D +A L Q V L + +
Sbjct: 178 EVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCM 237
Query: 196 SNCHLKG----PLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLS 251
HL+G + + FV + + + S S + L + + + R GL+
Sbjct: 238 GPSHLRGHNVAEVQKREFVCSDEEEG-HQSFMAPSCSVLHCPIACTCSNNIVDCRGKGLT 296
Query: 252 RLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTS 311
+P N T E+ + N + SP + L LD+ + + ++ F + S
Sbjct: 297 EIPTNLPETIT---EIRLEQNSIRVIPPGAFSPYKKLRRLDLSNNQISELAPDAFQGLRS 353
Query: 312 LKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGN 371
L +L+L GNK+ L LF+ L L +L LN + L F + + +L L L N
Sbjct: 354 LNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLH---NLNLLSLYDN 410
Query: 372 PLHVLPDSTKQYSMRTIPT 390
L + T ++R I T
Sbjct: 411 KLQTVAKGTFS-ALRAIQT 428
Score = 159 (61.0 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 88/324 (27%), Positives = 137/324 (42%)
Query: 68 KLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSH 127
+LDL+GN + I F L L L L ++ I AF +L L+ L L++N L+
Sbjct: 59 RLDLNGNNITRITKTDFAGLRHLRILQLMENKISTIERGAFHDLKELERLRLNRNNLQLF 118
Query: 128 IDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNL 187
+ L LG KL LDL ++ I +P F ++NL L N++ ++ + L
Sbjct: 119 PE-LLFLGT-AKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAF--RAL 174
Query: 188 VHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVA-LKP-LTKLHRLSL 245
L+ L L+N ++ LS +F + KLRT L N L D +A L L + R+ L
Sbjct: 175 RDLEVLTLNNNNITR-LSVASFNHMPKLRTFRLHSNNLYC-DCHLAWLSDWLRQRPRVGL 232
Query: 246 -RNC-GLSRLPANTF-----HRFTCLQELDISHNPLIDAFTALLSPLE---SLEHLDMGY 295
C G S L + F C E + + + + + L P+ S +D
Sbjct: 233 YTQCMGPSHLRGHNVAEVQKREFVCSDEEEGHQSFMAPSCSVLHCPIACTCSNNIVDCRG 292
Query: 296 SNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFH 355
L I + +T ++ L N + + G F L L+L+N ++ L F
Sbjct: 293 KGLTEIPTNLPETITEIR---LEQNSIRVIPPGAFSPYKKLRRLDLSNNQISELAPDAFQ 349
Query: 356 ENYTYPDLEELRLSGNPLHVLPDS 379
L L L GN + LP S
Sbjct: 350 G---LRSLNSLVLYGNKITELPKS 370
Score = 141 (54.7 bits), Expect = 2.7e-12, Sum P(2) = 2.7e-12
Identities = 43/134 (32%), Positives = 67/134 (50%)
Query: 17 PGLIT-INLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGN 74
P IT I L N I+ + GAF + L L + +S++ P F L +LN L L GN
Sbjct: 303 PETITEIRLEQNSIRVIPPGAFSPYKKLRRLDLSNNQISELAPDAFQGLRSLNSLVLYGN 362
Query: 75 PLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVL 134
+ + +F+ L SL+ L+LN + + AF +L++L L L NKL++ T
Sbjct: 363 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTVAKGTF-- 420
Query: 135 GNLGKLDTLDLRQS 148
L + T+ L Q+
Sbjct: 421 SALRAIQTMHLAQN 434
Score = 122 (48.0 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 52/183 (28%), Positives = 87/183 (47%)
Query: 69 LDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHI 128
+D G LRI+ + P + E L LN N+T I+ + F L HL+ L+L +NK+ S I
Sbjct: 39 VDCHGLALRIVPRNI--PRNT-ERLDLNGNNITRITKTDFAGLRHLRILQLMENKI-STI 94
Query: 129 DWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLV 188
+ +L +L+ L L ++ + P+ +F L L+L+EN++ + G V
Sbjct: 95 ERG-AFHDLKELERLRLNRNNLQLFPELLFLGTAKLYRLDLSENQIQAIPRKAFRGA--V 151
Query: 189 HLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVA-LKPLTKLHRLSLRN 247
+ +L L + + + AF L L L+ N ++ LSVA + KL L +
Sbjct: 152 DIKNLQLDYNQISC-IEDGAFRALRDLEVLTLNNNNITR--LSVASFNHMPKLRTFRLHS 208
Query: 248 CGL 250
L
Sbjct: 209 NNL 211
Score = 111 (44.1 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 30/89 (33%), Positives = 44/89 (49%)
Query: 289 EHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTR 348
E LD+ +N+ RI+++ F + L+ L L NK+ T+E G F +L L L LN L
Sbjct: 58 ERLDLNGNNITRITKTDFAGLRHLRILQLMENKISTIERGAFHDLKELERLRLNRNNLQL 117
Query: 349 LNETVFHENYTYPDLEELRLSGNPLHVLP 377
E +F L L LS N + +P
Sbjct: 118 FPELLFLGT---AKLYRLDLSENQIQAIP 143
Score = 110 (43.8 bits), Expect = 2.7e-12, Sum P(2) = 2.7e-12
Identities = 36/140 (25%), Positives = 66/140 (47%)
Query: 218 LYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDA 277
L L+ N + + + K L +L +++L N ++ + F + + E+ ++ N L +
Sbjct: 534 LRLNNNEFTVLEATGIFKKLPQLRKINLSNNKITDIEEGAFEGASGVNEILLTSNRLENV 593
Query: 278 FTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLS 337
+ LESL+ L + + + + +F + S++ L L N++ T+ G F L LS
Sbjct: 594 QHKMFKGLESLKTLMLRSNRISCVGNDSFTGLGSVRLLSLYDNQITTVAPGAFGTLHSLS 653
Query: 338 VLEL--N----NCGLTRLNE 351
L L N NC L L E
Sbjct: 654 TLNLLANPFNCNCHLAWLGE 673
Score = 107 (42.7 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 40/141 (28%), Positives = 66/141 (46%)
Query: 136 NLGKLDT-LDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLD 194
NL + T + L Q+ I +P F+ LR L+L+ N++ +L A Q L L+SL
Sbjct: 301 NLPETITEIRLEQNSIRVIPPGAFSPYKKLRRLDLSNNQISEL--APDAFQGLRSLNSLV 358
Query: 195 LSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLP 254
L + L + F L+ L L+ N ++ + A + L L+ LSL + L +
Sbjct: 359 LYGNKIT-ELPKSLFEGLFSLQLLLLNANKINCLRVD-AFQDLHNLNLLSLYDNKLQTVA 416
Query: 255 ANTFHRFTCLQELDISHNPLI 275
TF +Q + ++ NP I
Sbjct: 417 KGTFSALRAIQTMHLAQNPFI 437
Score = 98 (39.6 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 36/154 (23%), Positives = 63/154 (40%)
Query: 221 SGNPLSAADLSVALKPLT---KLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDA 277
SG+ + L++ + P RL L ++R+ F L+ L + N +
Sbjct: 35 SGSTVDCHGLALRIVPRNIPRNTERLDLNGNNITRITKTDFAGLRHLRILQLMENKISTI 94
Query: 278 FTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLS 337
L+ LE L + +NLQ FL L L LS N+++ + F+ +
Sbjct: 95 ERGAFHDLKELERLRLNRNNLQLFPELLFLGTAKLYRLDLSENQIQAIPRKAFRGAVDIK 154
Query: 338 VLELNNCGLTRLNETVFHENYTYPDLEELRLSGN 371
L+L+ ++ + + F DLE L L+ N
Sbjct: 155 NLQLDYNQISCIEDGAFR---ALRDLEVLTLNNN 185
Score = 95 (38.5 bits), Expect = 5.9e-16, Sum P(2) = 5.9e-16
Identities = 37/180 (20%), Positives = 73/180 (40%)
Query: 369 SGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNET-VFHENYTYPDLEELRLSGN 427
S L+ +PD QY T ++ N +F V L T +F + P L ++ LS N
Sbjct: 516 SNQKLNKIPDHIPQY---TAELRL-NNNEFTV----LEATGIFKK---LPQLRKINLSNN 564
Query: 428 PLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSF 487
+ + G +++ + +F ++ +L L +N +S SF
Sbjct: 565 KITDIEEGAFEGASGVNEILLTSN--RLENVQHKMFKGLESLKTLMLRSNRISCVGNDSF 622
Query: 488 QFXXXXXXXXXXXXXXXXXTHISPTVLRHNRAITSIKLVGNPWKCDCNIADMWEWATREK 547
T ++P +++++ L+ NP+ C+C++A + EW R++
Sbjct: 623 ---TGLGSVRLLSLYDNQITTVAPGAFGTLHSLSTLNLLANPFNCNCHLAWLGEWLRRKR 679
Score = 94 (38.1 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 40/148 (27%), Positives = 73/148 (49%)
Query: 178 DVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSV-ALKP 236
++ T L + + + L+ ++ + P AF KLR L LS N +S +L+ A +
Sbjct: 297 EIPTNLPETITEI-RLEQNSIRVIPP---GAFSPYKKLRRLDLSNNQIS--ELAPDAFQG 350
Query: 237 LTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPL----IDAFTALLSPLESLEHLD 292
L L+ L L ++ LP + F LQ L ++ N + +DAF L +L L
Sbjct: 351 LRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAF----QDLHNLNLLS 406
Query: 293 MGYSNLQRISRSTFLKMTSLKTLILSGN 320
+ + LQ +++ TF + +++T+ L+ N
Sbjct: 407 LYDNKLQTVAKGTFSALRAIQTMHLAQN 434
Score = 93 (37.8 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 31/133 (23%), Positives = 58/133 (43%)
Query: 243 LSLRNCGLSRLPAN-TFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRI 301
L L N + L A F + L+++++S+N + D + + + + L+ +
Sbjct: 534 LRLNNNEFTVLEATGIFKKLPQLRKINLSNNKITDIEEGAFEGASGVNEILLTSNRLENV 593
Query: 302 SRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYP 361
F + SLKTL+L N++ + + F L + +L L + +T + F T
Sbjct: 594 QHKMFKGLESLKTLMLRSNRISCVGNDSFTGLGSVRLLSLYDNQITTVAPGAFG---TLH 650
Query: 362 DLEELRLSGNPLH 374
L L L NP +
Sbjct: 651 SLSTLNLLANPFN 663
Score = 57 (25.1 bits), Expect = 7.3e-06, Sum P(3) = 7.3e-06
Identities = 17/70 (24%), Positives = 29/70 (41%)
Query: 419 LEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNN 478
+ E+RL N + V+P G +I L P+ F R++ SL L N
Sbjct: 306 ITEIRLEQNSIRVIPPGAFSPYKKLRRLDLSNN--QISELAPDAFQGLRSLNSLVLYGNK 363
Query: 479 LSMTSELSFQ 488
++ + F+
Sbjct: 364 ITELPKSLFE 373
Score = 53 (23.7 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 9/19 (47%), Positives = 14/19 (73%)
Query: 518 RAITSIKLVGNPWKCDCNI 536
RAI ++ L NP+ CDC++
Sbjct: 424 RAIQTMHLAQNPFICDCHL 442
>ZFIN|ZDB-GENE-071126-1 [details] [associations]
symbol:lrrn1 "leucine rich repeat neuronal 1"
species:7955 "Danio rerio" [GO:0016020 "membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR003961 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060
ZFIN:ZDB-GENE-071126-1 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 CTD:57633
GeneTree:ENSGT00690000102097 HOGENOM:HOG000252914
HOVERGEN:HBG052361 OMA:GINNMGE EMBL:CU468905 EMBL:BC155656
IPI:IPI00806642 RefSeq:NP_001124166.1 UniGene:Dr.29133
IntAct:A9JRH0 Ensembl:ENSDART00000084389 GeneID:568527
KEGG:dre:568527 NextBio:20889219 Uniprot:A9JRH0
Length = 717
Score = 233 (87.1 bits), Expect = 6.2e-16, P = 6.2e-16
Identities = 97/360 (26%), Positives = 160/360 (44%)
Query: 32 VEG--AFLVARSLLYL---YMQECT---LSKINPQFFTNLTTLNKLDLSGNPLRIIE-PG 82
VEG F++ ++L L + EC + +I P F T + N L + PG
Sbjct: 10 VEGQICFILLLAVLGLSSVHSTECPQLCVCEIRPWFTPQSTYREATTVDCNDLHLTRIPG 69
Query: 83 VFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDT 142
L++ ++L + N + + L +L L+LSQN + D + L N+ +L T
Sbjct: 70 ---NLSADTQVLLLQSNYIARTSEELEQLLNLTELDLSQNNFSNIRD--IGLTNMSQLTT 124
Query: 143 LDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKG 202
L L ++ I +PD + T L+ L + N++ +A L +L L L++ LK
Sbjct: 125 LHLEENQIVEMPDFSLQDLTNLQELYINHNQISS--IAPNAFAGLRNLLRLHLNSNRLKA 182
Query: 203 PLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFT 262
+ F + L L + NP+ L + KPLT L L L L+ +P N F
Sbjct: 183 -IDSRWFESTPNLEILMIGENPVVGI-LDLNFKPLTNLRSLVLAGMELTDIPGNAFVGLD 240
Query: 263 CLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSG-NK 321
L+ L N L+ L L +L+ LD+ + + +I F M LK L ++ +
Sbjct: 241 NLESLSFYDNKLVRVPQTALQKLPNLKFLDLNKNPIHKIQEGDFKNMLRLKELGINNMGE 300
Query: 322 LETLESGLFQNLTHLSVLEL-NNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDST 380
L +++ NL L+ LE NN + ++ F + P LE L L+ N L+ L +T
Sbjct: 301 LVSIDRFALDNLPELTKLEATNNPKFSYVSRLAFRD---LPALESLMLNNNALNSLYQAT 357
Score = 178 (67.7 bits), Expect = 6.0e-10, P = 6.0e-10
Identities = 76/256 (29%), Positives = 120/256 (46%)
Query: 15 DNPGLITINLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSG 73
D L + +N N I + AF R+LL L++ L I+ ++F + L L +
Sbjct: 142 DLTNLQELYINHNQISSIAPNAFAGLRNLLRLHLNSNRLKAIDSRWFESTPNLEILMIGE 201
Query: 74 NPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLV 133
NP+ I F PLT+L L+L LT I +AF L++L++L NKL + T
Sbjct: 202 NPVVGILDLNFKPLTNLRSLVLAGMELTDIPGNAFVGLDNLESLSFYDNKLV-RVPQT-A 259
Query: 134 LGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAE-NELIDLDVATTLGQNLVHLDS 192
L L L LDL ++ I + + F N L+ L + EL+ +D NL L
Sbjct: 260 LQKLPNLKFLDLNKNPIHKIQEGDFKNMLRLKELGINNMGELVSIDRFAL--DNLPELTK 317
Query: 193 LDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSA-----ADLSVALKPLTKLHRLSLR- 246
L+ +N +S AF + L +L L+ N L++ AD L+ ++ +H LR
Sbjct: 318 LEATNNPKFSYVSRLAFRDLPALESLMLNNNALNSLYQATADSLPNLREIS-IHSNPLRC 376
Query: 247 NCGLSRLPAN-TFHRF 261
+C + + +N T RF
Sbjct: 377 DCVIQWMSSNKTTIRF 392
Score = 173 (66.0 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 77/287 (26%), Positives = 134/287 (46%)
Query: 41 SLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFD--PLTSLEYLMLNRC 98
+L L + + S I TN++ L L L N +I+E F LT+L+ L +N
Sbjct: 97 NLTELDLSQNNFSNIRDIGLTNMSQLTTLHLEEN--QIVEMPDFSLQDLTNLQELYINHN 154
Query: 99 NLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVF 158
++ I+P+AF L +L L L+ N+LK+ ID + + L+ L + ++ + + D F
Sbjct: 155 QISSIAPNAFAGLRNLLRLHLNSNRLKA-ID-SRWFESTPNLEILMIGENPVVGILDLNF 212
Query: 159 ANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDL-SNCHLKGPLSEDAFVNATKLRT 217
T LR+L LA EL D+ +G L +L+SL N ++ P + A L+
Sbjct: 213 KPLTNLRSLVLAGMELTDIPGNAFVG--LDNLESLSFYDNKLVRVP--QTALQKLPNLKF 268
Query: 218 LYLSGNPLSAADLSVALKPLTKLHRLSLRNCG-LSRLPANTFHRFTCLQELDISHNPLID 276
L L+ NP+ K + +L L + N G L + L +L+ ++NP
Sbjct: 269 LDLNKNPIHKIQEG-DFKNMLRLKELGINNMGELVSIDRFALDNLPELTKLEATNNPKFS 327
Query: 277 AFTAL-LSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKL 322
+ L L +LE L + + L + ++T + +L+ + + N L
Sbjct: 328 YVSRLAFRDLPALESLMLNNNALNSLYQATADSLPNLREISIHSNPL 374
Score = 146 (56.5 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 75/315 (23%), Positives = 127/315 (40%)
Query: 131 TLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDL-DVATTLGQNLVH 189
T + GNL + L QS L L+L++N ++ D+ T N+
Sbjct: 65 TRIPGNLSADTQVLLLQSNYIARTSEELEQLLNLTELDLSQNNFSNIRDIGLT---NMSQ 121
Query: 190 LDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCG 249
L +L L + + + + + T L+ LY++ N +S+ + A L L RL L +
Sbjct: 122 LTTLHLEENQIV-EMPDFSLQDLTNLQELYINHNQISSIAPN-AFAGLRNLLRLHLNSNR 179
Query: 250 LSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKM 309
L + + F L+ L I NP++ PL +L L + L I + F+ +
Sbjct: 180 LKAIDSRWFESTPNLEILMIGENPVVGILDLNFKPLTNLRSLVLAGMELTDIPGNAFVGL 239
Query: 310 TSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDL------ 363
+L++L NKL + Q L +L L+LN + ++ E F +L
Sbjct: 240 DNLESLSFYDNKLVRVPQTALQKLPNLKFLDLNKNPIHKIQEGDFKNMLRLKELGINNMG 299
Query: 364 EELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDF--LVIL--FILNETVFHENY----- 414
E + + L LP+ TK + F L L +LN + Y
Sbjct: 300 ELVSIDRFALDNLPELTKLEATNNPKFSYVSRLAFRDLPALESLMLNNNALNSLYQATAD 359
Query: 415 TYPDLEELRLSGNPL 429
+ P+L E+ + NPL
Sbjct: 360 SLPNLREISIHSNPL 374
Score = 138 (53.6 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 71/302 (23%), Positives = 128/302 (42%)
Query: 45 LYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYIS 104
L +Q +++ + + L L +LDLS N I ++ L L L + +
Sbjct: 78 LLLQSNYIARTSEEL-EQLLNLTELDLSQNNFSNIRDIGLTNMSQLTTLHLEENQIVEMP 136
Query: 105 PSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWL 164
+ +L +L+ L ++ N++ S I G L L L L + + + F + L
Sbjct: 137 DFSLQDLTNLQELYINHNQISS-IAPNAFAG-LRNLLRLHLNSNRLKAIDSRWFESTPNL 194
Query: 165 RNLNLAENELID-LDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGN 223
L + EN ++ LD+ + L +L SL L+ L + +AFV L +L N
Sbjct: 195 EILMIGENPVVGILDLNF---KPLTNLRSLVLAGMELTD-IPGNAFVGLDNLESLSFYDN 250
Query: 224 PLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISH-NPLIDAFTALL 282
L AL+ L L L L + ++ F L+EL I++ L+ L
Sbjct: 251 KLVRVP-QTALQKLPNLKFLDLNKNPIHKIQEGDFKNMLRLKELGINNMGELVSIDRFAL 309
Query: 283 SPLESLEHLDMGYS-NLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLEL 341
L L L+ + +SR F + +L++L+L+ N L +L +L +L + +
Sbjct: 310 DNLPELTKLEATNNPKFSYVSRLAFRDLPALESLMLNNNALNSLYQATADSLPNLREISI 369
Query: 342 NN 343
++
Sbjct: 370 HS 371
>UNIPROTKB|Q9NR96 [details] [associations]
symbol:TLR9 "Toll-like receptor 9" species:9606 "Homo
sapiens" [GO:0002755 "MyD88-dependent toll-like receptor signaling
pathway" evidence=IEA] [GO:0004888 "transmembrane signaling
receptor activity" evidence=IEA] [GO:0034162 "toll-like receptor 9
signaling pathway" evidence=IEA] [GO:0050707 "regulation of
cytokine secretion" evidence=IEA] [GO:0006954 "inflammatory
response" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0045078 "positive regulation of interferon-gamma
biosynthetic process" evidence=IDA] [GO:0045356 "positive
regulation of interferon-alpha biosynthetic process" evidence=IDA]
[GO:0045359 "positive regulation of interferon-beta biosynthetic
process" evidence=IDA] [GO:0042742 "defense response to bacterium"
evidence=NAS] [GO:0005576 "extracellular region" evidence=NAS]
[GO:0035197 "siRNA binding" evidence=IMP] [GO:0005783 "endoplasmic
reticulum" evidence=ISS] [GO:0005768 "endosome" evidence=ISS]
[GO:0005764 "lysosome" evidence=ISS] [GO:0032009 "early phagosome"
evidence=ISS] [GO:0005149 "interleukin-1 receptor binding"
evidence=IPI] [GO:0000139 "Golgi membrane" evidence=TAS]
[GO:0005789 "endoplasmic reticulum membrane" evidence=TAS]
[GO:0008286 "insulin receptor signaling pathway" evidence=TAS]
[GO:0010008 "endosome membrane" evidence=TAS] [GO:0036020
"endolysosome membrane" evidence=TAS] [GO:0045087 "innate immune
response" evidence=TAS] [GO:0032728 "positive regulation of
interferon-beta production" evidence=ISS] [GO:0032735 "positive
regulation of interleukin-12 production" evidence=ISS] [GO:0002237
"response to molecule of bacterial origin" evidence=TAS]
[GO:0032715 "negative regulation of interleukin-6 production"
evidence=ISS] [GO:0032733 "positive regulation of interleukin-10
production" evidence=ISS] [GO:0032741 "positive regulation of
interleukin-18 production" evidence=ISS] [GO:0032760 "positive
regulation of tumor necrosis factor production" evidence=ISS]
[GO:0051770 "positive regulation of nitric-oxide synthase
biosynthetic process" evidence=ISS] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0007252
"I-kappaB phosphorylation" evidence=IDA] [GO:0042346 "positive
regulation of NF-kappaB import into nucleus" evidence=IDA]
[GO:0032757 "positive regulation of interleukin-8 production"
evidence=IDA] [GO:0032755 "positive regulation of interleukin-6
production" evidence=IDA] [GO:0032722 "positive regulation of
chemokine production" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0030277 "maintenance of gastrointestinal
epithelium" evidence=ISS] [GO:0051092 "positive regulation of
NF-kappaB transcription factor activity" evidence=IDA] [GO:0016323
"basolateral plasma membrane" evidence=IDA] [GO:0016324 "apical
plasma membrane" evidence=IDA] [GO:0043507 "positive regulation of
JUN kinase activity" evidence=IDA] [GO:0043123 "positive regulation
of I-kappaB kinase/NF-kappaB cascade" evidence=IDA] [GO:0046330
"positive regulation of JNK cascade" evidence=IC] [GO:0032717
"negative regulation of interleukin-8 production" evidence=IDA]
[GO:0034122 "negative regulation of toll-like receptor signaling
pathway" evidence=IDA] [GO:0034123 "positive regulation of
toll-like receptor signaling pathway" evidence=IDA] [GO:0032088
"negative regulation of NF-kappaB transcription factor activity"
evidence=IDA] [GO:0050729 "positive regulation of inflammatory
response" evidence=IC] Pfam:PF00560 InterPro:IPR000157
InterPro:IPR001611 InterPro:IPR027181 Pfam:PF01582 PROSITE:PS50104
PROSITE:PS51450 GO:GO:0016021 Reactome:REACT_111102
Reactome:REACT_6900 GO:GO:0008286 GO:GO:0005576 GO:GO:0000139
GO:GO:0005789 EMBL:CH471055 GO:GO:0016324 GO:GO:0043123
GO:GO:0042742 GO:GO:0006954 GO:GO:0046330 GO:GO:0045944
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0045087
GO:GO:0016323 GO:GO:0032722 GO:GO:0032755 GO:GO:0050729
GO:GO:0030277 GO:GO:0032715 GO:GO:0032009 GO:GO:0032717
GO:GO:0051092 GO:GO:0032757 GO:GO:0002237 GO:GO:0035197
GO:GO:0032088 GO:GO:0034122 GO:GO:0032760 GO:GO:0032735
GO:GO:0042346 GO:GO:0051770 GO:GO:0045078 GO:GO:0032733
GO:GO:0043507 GO:GO:0032728 GO:GO:0007252 DrugBank:DB00608
SUPFAM:SSF52200 GO:GO:0045359 GO:GO:0032741 GO:GO:0034123
GO:GO:0036020 GO:GO:0045356 HOVERGEN:HBG018601 OrthoDB:EOG47SSDD
PANTHER:PTHR24373:SF37 CTD:54106 EMBL:AF259262 EMBL:AF259263
EMBL:AF245704 EMBL:AF246972 EMBL:AF246973 EMBL:AF246974
EMBL:AB045180 EMBL:EU170540 EMBL:EU170541 EMBL:EU170542
EMBL:EU170543 EMBL:AB445673 EMBL:DQ019992 EMBL:DQ019993
EMBL:DQ019994 EMBL:DQ019995 EMBL:DQ019996 EMBL:DQ019999
EMBL:AY359085 EMBL:BC032713 IPI:IPI00010140 IPI:IPI00219487
IPI:IPI00219488 IPI:IPI00219490 IPI:IPI00914987 RefSeq:NP_059138.1
UniGene:Hs.87968 ProteinModelPortal:Q9NR96 SMR:Q9NR96 IntAct:Q9NR96
MINT:MINT-7242147 STRING:Q9NR96 PhosphoSite:Q9NR96 DMDM:20140872
PaxDb:Q9NR96 PRIDE:Q9NR96 DNASU:54106 Ensembl:ENST00000360658
GeneID:54106 KEGG:hsa:54106 UCSC:uc003dda.2 GeneCards:GC03M052255
H-InvDB:HIX0163454 HGNC:HGNC:15633 HPA:HPA004731 MIM:605474
neXtProt:NX_Q9NR96 PharmGKB:PA38010 InParanoid:Q9NR96 KO:K10161
BindingDB:Q9NR96 ChEMBL:CHEMBL5804 GenomeRNAi:54106 NextBio:56466
ArrayExpress:Q9NR96 Bgee:Q9NR96 CleanEx:HS_TLR9
Genevestigator:Q9NR96 GermOnline:ENSG00000173366 Uniprot:Q9NR96
Length = 1032
Score = 235 (87.8 bits), Expect = 6.8e-16, P = 6.8e-16
Identities = 131/465 (28%), Positives = 203/465 (43%)
Query: 45 LYMQECTLSKINPQFFTNLTTLNKLDLSGNPLR--IIEPGVFDPLTSLEYLMLN-----R 97
L +++ +LS +N +F L L LDLS N L I + F LT L L L+ R
Sbjct: 289 LVLKDSSLSWLNASWFRGLGNLRVLDLSENFLYKCITKTKAFQGLTQLRKLNLSFNYQKR 348
Query: 98 CNLTYIS--PSAFDNLNHLKTLELSQNKLKSHIDWTL-VLGNLGKLDTLDLRQSGISNLP 154
+ ++S PS F +L LK L++ +S + TL L L L TL L+ + I+
Sbjct: 349 VSFAHLSLAPS-FGSLVALKELDMHGIFFRSLDETTLRPLARLPMLQTLRLQMNFINQAQ 407
Query: 155 DNVFANNTWLRNLNLAENELIDL-DVATTLGQ----NLVHLDSLDLSNCHLKGPLSEDAF 209
+F LR ++L++N + ++ T+G+ V L DL+ + P SED
Sbjct: 408 LGIFRAFPGLRYVDLSDNRISGASELTATMGEADGGEKVWLQPGDLAPAPVDTPSSEDFR 467
Query: 210 VNATKLR-TLYLSGNPLSAA--DLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQE 266
N + L TL LS N L ++ L L L RLS NC + + F T LQ
Sbjct: 468 PNCSTLNFTLDLSRNNLVTVQPEMFAQLSHLQCL-RLS-HNCISQAVNGSQFLPLTGLQV 525
Query: 267 LDISHNPLIDAFTALLSPLESLEHLDMGYSN----LQRISRS-TFLK-MTSLKTLILSGN 320
LD+SHN L + L LE LD+ Y++ +Q + + +F+ + +L+ L L+ N
Sbjct: 526 LDLSHNKLDLYHEHSFTELPRLEALDLSYNSQPFGMQGVGHNFSFVAHLRTLRHLSLAHN 585
Query: 321 KLETLESGLFQNLTHLSVLELNNCGLTRL---NETVFHENYTYPDLEELRLSGNPLHVLP 377
+ + S + T L L+ + L + + H L L LS N LH L
Sbjct: 586 NIHSQVSQQLCS-TSLRALDFSGNALGHMWAEGDLYLHFFQGLSGLIWLDLSQNRLHTLL 644
Query: 378 DSTKQYSMRTIPT--QIWKNFDFLVILFILNETVFHENYTYPDLEELRLSGNPLHVLPTG 435
T +R +P Q+ + D + F + + P LE L L+GN L L G
Sbjct: 645 PQT----LRNLPKSLQVLRLRDNYLAFF-----KWWSLHFLPKLEVLDLAGNQLKALTNG 695
Query: 436 NXXXXXXXXXXXXXXXXCK-IDYLPPNVFNNTRNITSLNLANNNL 479
+ C I ++ P F+ + + LNL+ N L
Sbjct: 696 SLPAGTRLRRLDVS---CNSISFVAPGFFSKAKELRELNLSANAL 737
Score = 188 (71.2 bits), Expect = 8.4e-11, P = 8.4e-11
Identities = 92/299 (30%), Positives = 140/299 (46%)
Query: 59 FFTNLTTLN-KLDLSGNPLRIIEPGVFDPLTSLEYLMLNR-CNLTYISPSAFDNLNHLKT 116
F N +TLN LDLS N L ++P +F L+ L+ L L+ C ++ S F L L+
Sbjct: 466 FRPNCSTLNFTLDLSRNNLVTVQPEMFAQLSHLQCLRLSHNCISQAVNGSQFLPLTGLQV 525
Query: 117 LELSQNKLKSHIDWTLVLGNLGKLDTLDLRQS----GISNLPDNV--FANNTWLRNLNLA 170
L+LS NKL + + + L +L+ LDL + G+ + N A+ LR+L+LA
Sbjct: 526 LDLSHNKLDLYHEHSFT--ELPRLEALDLSYNSQPFGMQGVGHNFSFVAHLRTLRHLSLA 583
Query: 171 ENELIDLDVATTLGQNLVHLDSLDLS-NC--HL--KGPLSEDAFVNATKLRTLYLSGNPL 225
N I V+ L L +LD S N H+ +G L F + L L LS N L
Sbjct: 584 HNN-IHSQVSQQLCST--SLRALDFSGNALGHMWAEGDLYLHFFQGLSGLIWLDLSQNRL 640
Query: 226 SAADLSVALKPLTK-LHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSP 284
L L+ L K L L LR+ L+ + H L+ LD++ N L L
Sbjct: 641 HTL-LPQTLRNLPKSLQVLRLRDNYLAFFKWWSLHFLPKLEVLDLAGNQLKALTNGSLPA 699
Query: 285 LESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTH-LSVLELN 342
L LD+ +++ ++ F K L+ L LS N L+T++ F L L +L+++
Sbjct: 700 GTRLRRLDVSCNSISFVAPGFFSKAKELRELNLSANALKTVDHSWFGPLASALQILDVS 758
Score = 176 (67.0 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 92/336 (27%), Positives = 147/336 (43%)
Query: 41 SLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRI----------------IEPGVF 84
SL YL + + K+ P+ NLT L LD+ GN R + P F
Sbjct: 221 SLEYLLLSYNRIVKLAPEDLANLTALRVLDVGGNCRRCDHAPNPCMECPRHFPQLHPDTF 280
Query: 85 DPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLD 144
L+ LE L+L +L++++ S F L +L+ L+LS+N L I T L +L L+
Sbjct: 281 SHLSRLEGLVLKDSSLSWLNASWFRGLGNLRVLDLSENFLYKCITKTKAFQGLTQLRKLN 340
Query: 145 LR---QSGIS----NLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSN 197
L Q +S +L + F + L+ L++ LD TTL + L L L
Sbjct: 341 LSFNYQKRVSFAHLSLAPS-FGSLVALKELDMHGIFFRSLD-ETTL-RPLARLPMLQTLR 397
Query: 198 CHLK--GPLSEDAFVNATKLRTLYLSGNPLS-AADLSVALKPLTKLHRLSLRNCGLSRLP 254
+ F LR + LS N +S A++L+ + ++ L+ L+ P
Sbjct: 398 LQMNFINQAQLGIFRAFPGLRYVDLSDNRISGASELTATMGEADGGEKVWLQPGDLAPAP 457
Query: 255 ANT----FHRFTCLQ---ELDISHNPLIDAFTALLSPLESLEHLDMGYSNL-QRISRSTF 306
+T R C LD+S N L+ + + L L+ L + ++ + Q ++ S F
Sbjct: 458 VDTPSSEDFRPNCSTLNFTLDLSRNNLVTVQPEMFAQLSHLQCLRLSHNCISQAVNGSQF 517
Query: 307 LKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELN 342
L +T L+ L LS NKL+ F L L L+L+
Sbjct: 518 LPLTGLQVLDLSHNKLDLYHEHSFTELPRLEALDLS 553
Score = 156 (60.0 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 87/319 (27%), Positives = 138/319 (43%)
Query: 70 DLSGNPLRIIEPGVFDP-LTSLEYLM-LNRCNLTYISPSAFDNLNHLKTLELSQNKLKSH 127
DL+ P+ F P ++L + + L+R NL + P F L+HL+ L LS N +
Sbjct: 452 DLAPAPVDTPSSEDFRPNCSTLNFTLDLSRNNLVTVQPEMFAQLSHLQCLRLSHNCISQA 511
Query: 128 IDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQN- 186
++ + L G L LDL + + ++ F L L+L+ N + +G N
Sbjct: 512 VNGSQFLPLTG-LQVLDLSHNKLDLYHEHSFTELPRLEALDLSYNSQ-PFGMQG-VGHNF 568
Query: 187 --LVHLDSL-DLSNCH--LKGPLSEDAFVNATKLRTLYLSGNPL----SAADLSVAL-KP 236
+ HL +L LS H + +S+ + +T LR L SGN L + DL + +
Sbjct: 569 SFVAHLRTLRHLSLAHNNIHSQVSQQ--LCSTSLRALDFSGNALGHMWAEGDLYLHFFQG 626
Query: 237 LTKLHRLSLRNCGLSRLPANTFHRFT-CLQELDISHNPLIDAFTALLSPLESLEHLDMGY 295
L+ L L L L L T LQ L + N L L L LE LD+
Sbjct: 627 LSGLIWLDLSQNRLHTLLPQTLRNLPKSLQVLRLRDNYLAFFKWWSLHFLPKLEVLDLAG 686
Query: 296 SNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFH 355
+ L+ ++ + T L+ L +S N + + G F L L L+ L ++ + F
Sbjct: 687 NQLKALTNGSLPAGTRLRRLDVSCNSISFVAPGFFSKAKELRELNLSANALKTVDHSWFG 746
Query: 356 ENYTYPDLEELRLSGNPLH 374
+ L+ L +S NPLH
Sbjct: 747 PLASA--LQILDVSANPLH 763
Score = 123 (48.4 bits), Expect = 0.00087, P = 0.00087
Identities = 83/342 (24%), Positives = 147/342 (42%)
Query: 50 CTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFD 109
C ++ I P F + TL +L+LS N + + P + L SL L+ N+ + ++
Sbjct: 110 CHMT-IEPSTFLAVPTLEELNLSYNNIMTV-PALPKSLISLS---LSHTNILMLDSASLA 164
Query: 110 NLNHLKTLELS-----QNKLKSHIDWT--LVLGNLGKLDTLDLRQSGISNLPDNVFANNT 162
L+ L+ L + +N + ++ +LG LG L L L+ + ++ +P N+ ++
Sbjct: 165 GLHALRFLFMDGNCYYKNPCRQALEVAPGALLG-LGNLTHLSLKYNNLTVVPRNLPSS-- 221
Query: 163 WLRNLNLAENELIDLDVATTLGQNLVHLDSLDLS-NCHLKGPLSEDAFVNATKLRTLYLS 221
L L L+ N ++ L L NL L LD+ NC L+
Sbjct: 222 -LEYLLLSYNRIVKL-APEDLA-NLTALRVLDVGGNCRRCDHAPNPCMECPRHFPQLH-- 276
Query: 222 GNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTAL 281
P + + LS +L L L++ LS L A+ F L+ LD+S N L T
Sbjct: 277 --PDTFSHLS-------RLEGLVLKDSSLSWLNASWFRGLGNLRVLDLSENFLYKCITKT 327
Query: 282 --LSPLESLEHLDMGYSNLQRISRS------TFLKMTSLKTLILSGNKLETLESGLFQNL 333
L L L++ ++ +R+S + +F + +LK L + G +L+ + L
Sbjct: 328 KAFQGLTQLRKLNLSFNYQKRVSFAHLSLAPSFGSLVALKELDMHGIFFRSLDETTLRPL 387
Query: 334 THLSVLELNNCGLTRLNET---VFHE--NYTYPDLEELRLSG 370
L +L+ + +N+ +F Y DL + R+SG
Sbjct: 388 ARLPMLQTLRLQMNFINQAQLGIFRAFPGLRYVDLSDNRISG 429
>ZFIN|ZDB-GENE-040220-4 [details] [associations]
symbol:tlr21 "toll-like receptor 21" species:7955
"Danio rerio" [GO:0007165 "signal transduction" evidence=IEA]
[GO:0052033 "pathogen-associated molecular pattern dependent
induction by symbiont of host innate immune response" evidence=IDA]
Pfam:PF00560 InterPro:IPR000157 InterPro:IPR001611 Pfam:PF01582
PROSITE:PS50104 PROSITE:PS51450 SMART:SM00255
ZFIN:ZDB-GENE-040220-4 GO:GO:0007165 InterPro:IPR003591
SMART:SM00369 GO:GO:0005622 GO:GO:0052033 SUPFAM:SSF52200
GeneTree:ENSGT00680000099674 EMBL:BX571826 IPI:IPI00487094
RefSeq:NP_001186264.1 UniGene:Dr.161713 UniGene:Dr.85003
Ensembl:ENSDART00000060142 GeneID:402884 KEGG:dre:402884 CTD:402884
OMA:LTLDNSC NextBio:20816703 ArrayExpress:F1QMN8 Bgee:F1QMN8
Uniprot:F1QMN8
Length = 989
Score = 234 (87.4 bits), Expect = 8.1e-16, P = 8.1e-16
Identities = 92/348 (26%), Positives = 155/348 (44%)
Query: 38 VARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNR 97
+ SL L + + +I+ F+N L L+L+ N + ++ L L+ L L+
Sbjct: 381 IHNSLTNLSYRYNRILQISGYAFSNTPKLEILELNINIIAYMDHKALSGLKDLKTLRLDN 440
Query: 98 CNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNV 157
L+ I +F++L +LKTL L N++ ++T NL KLD LDL + IS L +
Sbjct: 441 NLLSDIYNDSFEDLTNLKTLNLRNNEIAVIFNYTFQ--NLSKLDILDLGGNKISQLKPHA 498
Query: 158 FANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLK--GPLSEDAFVNATKL 215
F L NL L N L +DV G+ L LDL + + F N ++L
Sbjct: 499 FDGLYSLTNLYLDRNHLKMIDVVL-FGKLSGTLQVLDLQGNMIMYFTEHTHSPFKNMSRL 557
Query: 216 RTLYLSGNPLSAADL--SVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHN- 272
L L+G + +L + LT L L L N + TF L L + ++
Sbjct: 558 YDLKLNGQQPNGINLLPRAFFRGLTSLKSLYLTNNHIIGFGDETFDDLKNLDYLTLDNSC 617
Query: 273 -PLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQ 331
+ + + L+ L L + ++ S+ F +T LKTL L+ N + +L+ L
Sbjct: 618 AGVAQLQSGIFKSLQKLRTLSLENMGIKSFSKDVFGNLTGLKTLHLNRNPMMSLDISLLD 677
Query: 332 NLTHLSVLELNNCGLT-------RLNETVFHENYTYPDLEELRLSGNP 372
NLT+L +++ +C L+ N T+ ++ +P L + +P
Sbjct: 678 NLTNLIYIDMRSCPLSCGCHNSDLQNWTIMNKRLQFPHLFNITCPDHP 725
Score = 176 (67.0 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 123/488 (25%), Positives = 202/488 (41%)
Query: 17 PGLITINLNANPIQPVEG-AFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNP 75
P + + ++ + I+ V+ +F +L L + ++ I+ F NL L L+LS N
Sbjct: 60 PTALNLTISHSNIEYVQSQSFDHLPNLTALILDANHITNIDKDAFNNLHHLQTLNLSCNN 119
Query: 76 LRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLG 135
+ + VF L +L L+L LT F +L +LK L+L +N L + +
Sbjct: 120 ISFLHRDVFSDLHNLTQLLLGSNKLTNPDKYLFSSLTNLKILDLRRNHLYNFSSVVESIT 179
Query: 136 NLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDL 195
NL L LDL + ++ L + + L L L +N+L L + N+ LD D
Sbjct: 180 NLTSLIKLDLSFNKLTTLQHSTHLPES-LALLYLGDNKLKTLGCDKSFLMNVKKLDLSDN 238
Query: 196 SNCHLKGPLS---EDA------FVNATKLRTL-YLSGNPLSAADLSVALKPLTKLHRLSL 245
N K L E+ F N + + L Y + +P D S LK L H LS
Sbjct: 239 KNLASKSFLGLKLENITYLRLRFTNISIFKLLTYPNVHPWHI-DFS-GLK-LKNSHALSS 295
Query: 246 RNCGLSRLPANTFHRFTCLQELDISHNPL--IDAFTALLSPLESLEHLDMGYSNLQRISR 303
C L R N H+ + ++ + N + + T P + E +D+ + L+
Sbjct: 296 L-CVLMR---NHSHKHLQIPKMLLQSNSIGALKNNTFRYCPSITRE-MDLSRNELKSAGC 350
Query: 304 STFL-KMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTY-- 360
FL T LK+L + N L L S + H S+ L+ R N + Y +
Sbjct: 351 LQFLHNQTQLKSLKMEHNHLTKLTSCNKAEI-HNSLTNLSY----RYNRILQISGYAFSN 405
Query: 361 -PDLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTYPDL 419
P LE L L+ N + + D ++ + T D ++ I N++ E+ T +L
Sbjct: 406 TPKLEILELNINIIAYM-DHKALSGLKDLKTL---RLDNNLLSDIYNDSF--EDLT--NL 457
Query: 420 EELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNL 479
+ L L N + V+ N KI L P+ F+ ++T+L L N+L
Sbjct: 458 KTLNLRNNEIAVI--FNYTFQNLSKLDILDLGGNKISQLKPHAFDGLYSLTNLYLDRNHL 515
Query: 480 SMTSELSF 487
M + F
Sbjct: 516 KMIDVVLF 523
Score = 169 (64.5 bits), Expect = 8.9e-09, P = 8.9e-09
Identities = 110/437 (25%), Positives = 187/437 (42%)
Query: 64 TTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNK 123
T LN L +S + + ++ FD L +L L+L+ ++T I AF+NL+HL+TL LS N
Sbjct: 61 TALN-LTISHSNIEYVQSQSFDHLPNLTALILDANHITNIDKDAFNNLHHLQTLNLSCNN 119
Query: 124 LKS-HIDWTLVLGNLGKLDTLDLRQSGISNLPDN-VFANNTWLRNLNLAENELIDLDVAT 181
+ H D V +L L L L + ++N PD +F++ T L+ L+L N L +
Sbjct: 120 ISFLHRD---VFSDLHNLTQLLLGSNKLTN-PDKYLFSSLTNLKILDLRRNHLYNFSSVV 175
Query: 182 TLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVA-LKPLTKL 240
NL L LDLS L L + + L LYL N L + L + KL
Sbjct: 176 ESITNLTSLIKLDLSFNKLT-TLQHSTHLPES-LALLYLGDNKLKTLGCDKSFLMNVKKL 233
Query: 241 HRLSLRNC------GLSRLPANTFHR--FTCLQELDISHNPLIDAFTALLSPLESLEHLD 292
+N GL +L T+ R FT + + P + + S L+ L++
Sbjct: 234 DLSDNKNLASKSFLGL-KLENITYLRLRFTNISIFKLLTYPNVHPWHIDFSGLK-LKN-S 290
Query: 293 MGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLS-VLELNNCGLTRLNE 351
S+L + R+ K + ++L N + L++ F+ ++ ++L+ L
Sbjct: 291 HALSSLCVLMRNHSHKHLQIPKMLLQSNSIGALKNNTFRYCPSITREMDLSRNELKSAGC 350
Query: 352 TVFHENYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFH 411
F N T L+ L++ N L L K ++ T + ++ + IL I + F
Sbjct: 351 LQFLHNQT--QLKSLKMEHNHLTKLTSCNKAEIHNSL-TNL--SYRYNRILQI-SGYAFS 404
Query: 412 ENYTYPDLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITS 471
P LE L L+ N + + + + + + F + N+ +
Sbjct: 405 NT---PKLEILELNINIIAYMD--HKALSGLKDLKTLRLDNNLLSDIYNDSFEDLTNLKT 459
Query: 472 LNLANNNLSMTSELSFQ 488
LNL NN +++ +FQ
Sbjct: 460 LNLRNNEIAVIFNYTFQ 476
Score = 159 (61.0 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 81/333 (24%), Positives = 138/333 (41%)
Query: 160 NNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKG-PLSEDAFVNATKLRTL 218
N T L++L + N L L T+ + +H +LS + + +S AF N KL L
Sbjct: 356 NQTQLKSLKMEHNHLTKL---TSCNKAEIHNSLTNLSYRYNRILQISGYAFSNTPKLEIL 412
Query: 219 YLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAF 278
L+ N ++ D AL L L L L N LS + ++F T L+ L++ +N + F
Sbjct: 413 ELNINIIAYMDHK-ALSGLKDLKTLRLDNNLLSDIYNDSFEDLTNLKTLNLRNNEIAVIF 471
Query: 279 TALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTH-LS 337
L L+ LD+G + + ++ F + SL L L N L+ ++ LF L+ L
Sbjct: 472 NYTFQNLSKLDILDLGGNKISQLKPHAFDGLYSLTNLYLDRNHLKMIDVVLFGKLSGTLQ 531
Query: 338 VLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFD 397
VL+L + E L +L+L+G P+ + +P ++
Sbjct: 532 VLDLQGNMIMYFTEHTHSPFKNMSRLYDLKLNGQQ----PNG-----INLLPRAFFRGLT 582
Query: 398 FLVILFILNETVF-HENYTYPDLEEL---RLSGNPLHVLPTGNXXXXXXXXXXXXXXXXC 453
L L++ N + + T+ DL+ L L + V +
Sbjct: 583 SLKSLYLTNNHIIGFGDETFDDLKNLDYLTLDNSCAGVAQLQSGIFKSLQKLRTLSLENM 642
Query: 454 KIDYLPPNVFNNTRNITSLNLANNNLSMTSELS 486
I +VF N + +L+L N N M+ ++S
Sbjct: 643 GIKSFSKDVFGNLTGLKTLHL-NRNPMMSLDIS 674
>UNIPROTKB|H0Y858 [details] [associations]
symbol:H0Y858 "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0002237 "response to molecule of bacterial origin"
evidence=IEA] [GO:0002755 "MyD88-dependent toll-like receptor
signaling pathway" evidence=IEA] [GO:0003779 "actin binding"
evidence=IEA] [GO:0004888 "transmembrane signaling receptor
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0034162
"toll-like receptor 9 signaling pathway" evidence=IEA] [GO:0045087
"innate immune response" evidence=IEA] [GO:0050707 "regulation of
cytokine secretion" evidence=IEA] [GO:0050729 "positive regulation
of inflammatory response" evidence=IEA] Pfam:PF00560
InterPro:IPR000157 InterPro:IPR001611 InterPro:IPR002108
InterPro:IPR027181 Pfam:PF00241 Pfam:PF01582 PROSITE:PS50104
PROSITE:PS51263 PROSITE:PS51450 SMART:SM00102 GO:GO:0007165
InterPro:IPR003591 SMART:SM00369 GO:GO:0005622 SUPFAM:SSF52200
PANTHER:PTHR24373:SF37 OMA:VGGNCRR EMBL:AC097637
ProteinModelPortal:H0Y858 Ensembl:ENST00000494383 Uniprot:H0Y858
Length = 1186
Score = 235 (87.8 bits), Expect = 8.2e-16, P = 8.2e-16
Identities = 131/465 (28%), Positives = 203/465 (43%)
Query: 45 LYMQECTLSKINPQFFTNLTTLNKLDLSGNPLR--IIEPGVFDPLTSLEYLMLN-----R 97
L +++ +LS +N +F L L LDLS N L I + F LT L L L+ R
Sbjct: 443 LVLKDSSLSWLNASWFRGLGNLRVLDLSENFLYKCITKTKAFQGLTQLRKLNLSFNYQKR 502
Query: 98 CNLTYIS--PSAFDNLNHLKTLELSQNKLKSHIDWTL-VLGNLGKLDTLDLRQSGISNLP 154
+ ++S PS F +L LK L++ +S + TL L L L TL L+ + I+
Sbjct: 503 VSFAHLSLAPS-FGSLVALKELDMHGIFFRSLDETTLRPLARLPMLQTLRLQMNFINQAQ 561
Query: 155 DNVFANNTWLRNLNLAENELIDL-DVATTLGQ----NLVHLDSLDLSNCHLKGPLSEDAF 209
+F LR ++L++N + ++ T+G+ V L DL+ + P SED
Sbjct: 562 LGIFRAFPGLRYVDLSDNRISGASELTATMGEADGGEKVWLQPGDLAPAPVDTPSSEDFR 621
Query: 210 VNATKLR-TLYLSGNPLSAA--DLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQE 266
N + L TL LS N L ++ L L L RLS NC + + F T LQ
Sbjct: 622 PNCSTLNFTLDLSRNNLVTVQPEMFAQLSHLQCL-RLS-HNCISQAVNGSQFLPLTGLQV 679
Query: 267 LDISHNPLIDAFTALLSPLESLEHLDMGYSN----LQRISRS-TFLK-MTSLKTLILSGN 320
LD+SHN L + L LE LD+ Y++ +Q + + +F+ + +L+ L L+ N
Sbjct: 680 LDLSHNKLDLYHEHSFTELPRLEALDLSYNSQPFGMQGVGHNFSFVAHLRTLRHLSLAHN 739
Query: 321 KLETLESGLFQNLTHLSVLELNNCGLTRL---NETVFHENYTYPDLEELRLSGNPLHVLP 377
+ + S + T L L+ + L + + H L L LS N LH L
Sbjct: 740 NIHSQVSQQLCS-TSLRALDFSGNALGHMWAEGDLYLHFFQGLSGLIWLDLSQNRLHTLL 798
Query: 378 DSTKQYSMRTIPT--QIWKNFDFLVILFILNETVFHENYTYPDLEELRLSGNPLHVLPTG 435
T +R +P Q+ + D + F + + P LE L L+GN L L G
Sbjct: 799 PQT----LRNLPKSLQVLRLRDNYLAFF-----KWWSLHFLPKLEVLDLAGNQLKALTNG 849
Query: 436 NXXXXXXXXXXXXXXXXCK-IDYLPPNVFNNTRNITSLNLANNNL 479
+ C I ++ P F+ + + LNL+ N L
Sbjct: 850 SLPAGTRLRRLDVS---CNSISFVAPGFFSKAKELRELNLSANAL 891
Score = 188 (71.2 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 92/299 (30%), Positives = 140/299 (46%)
Query: 59 FFTNLTTLN-KLDLSGNPLRIIEPGVFDPLTSLEYLMLNR-CNLTYISPSAFDNLNHLKT 116
F N +TLN LDLS N L ++P +F L+ L+ L L+ C ++ S F L L+
Sbjct: 620 FRPNCSTLNFTLDLSRNNLVTVQPEMFAQLSHLQCLRLSHNCISQAVNGSQFLPLTGLQV 679
Query: 117 LELSQNKLKSHIDWTLVLGNLGKLDTLDLRQS----GISNLPDNV--FANNTWLRNLNLA 170
L+LS NKL + + + L +L+ LDL + G+ + N A+ LR+L+LA
Sbjct: 680 LDLSHNKLDLYHEHSFT--ELPRLEALDLSYNSQPFGMQGVGHNFSFVAHLRTLRHLSLA 737
Query: 171 ENELIDLDVATTLGQNLVHLDSLDLS-NC--HL--KGPLSEDAFVNATKLRTLYLSGNPL 225
N I V+ L L +LD S N H+ +G L F + L L LS N L
Sbjct: 738 HNN-IHSQVSQQLCST--SLRALDFSGNALGHMWAEGDLYLHFFQGLSGLIWLDLSQNRL 794
Query: 226 SAADLSVALKPLTK-LHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSP 284
L L+ L K L L LR+ L+ + H L+ LD++ N L L
Sbjct: 795 HTL-LPQTLRNLPKSLQVLRLRDNYLAFFKWWSLHFLPKLEVLDLAGNQLKALTNGSLPA 853
Query: 285 LESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTH-LSVLELN 342
L LD+ +++ ++ F K L+ L LS N L+T++ F L L +L+++
Sbjct: 854 GTRLRRLDVSCNSISFVAPGFFSKAKELRELNLSANALKTVDHSWFGPLASALQILDVS 912
Score = 176 (67.0 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 92/336 (27%), Positives = 147/336 (43%)
Query: 41 SLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRI----------------IEPGVF 84
SL YL + + K+ P+ NLT L LD+ GN R + P F
Sbjct: 375 SLEYLLLSYNRIVKLAPEDLANLTALRVLDVGGNCRRCDHAPNPCMECPRHFPQLHPDTF 434
Query: 85 DPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLD 144
L+ LE L+L +L++++ S F L +L+ L+LS+N L I T L +L L+
Sbjct: 435 SHLSRLEGLVLKDSSLSWLNASWFRGLGNLRVLDLSENFLYKCITKTKAFQGLTQLRKLN 494
Query: 145 LR---QSGIS----NLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSN 197
L Q +S +L + F + L+ L++ LD TTL + L L L
Sbjct: 495 LSFNYQKRVSFAHLSLAPS-FGSLVALKELDMHGIFFRSLD-ETTL-RPLARLPMLQTLR 551
Query: 198 CHLK--GPLSEDAFVNATKLRTLYLSGNPLS-AADLSVALKPLTKLHRLSLRNCGLSRLP 254
+ F LR + LS N +S A++L+ + ++ L+ L+ P
Sbjct: 552 LQMNFINQAQLGIFRAFPGLRYVDLSDNRISGASELTATMGEADGGEKVWLQPGDLAPAP 611
Query: 255 ANT----FHRFTCLQ---ELDISHNPLIDAFTALLSPLESLEHLDMGYSNL-QRISRSTF 306
+T R C LD+S N L+ + + L L+ L + ++ + Q ++ S F
Sbjct: 612 VDTPSSEDFRPNCSTLNFTLDLSRNNLVTVQPEMFAQLSHLQCLRLSHNCISQAVNGSQF 671
Query: 307 LKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELN 342
L +T L+ L LS NKL+ F L L L+L+
Sbjct: 672 LPLTGLQVLDLSHNKLDLYHEHSFTELPRLEALDLS 707
Score = 156 (60.0 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 87/319 (27%), Positives = 138/319 (43%)
Query: 70 DLSGNPLRIIEPGVFDP-LTSLEYLM-LNRCNLTYISPSAFDNLNHLKTLELSQNKLKSH 127
DL+ P+ F P ++L + + L+R NL + P F L+HL+ L LS N +
Sbjct: 606 DLAPAPVDTPSSEDFRPNCSTLNFTLDLSRNNLVTVQPEMFAQLSHLQCLRLSHNCISQA 665
Query: 128 IDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQN- 186
++ + L G L LDL + + ++ F L L+L+ N + +G N
Sbjct: 666 VNGSQFLPLTG-LQVLDLSHNKLDLYHEHSFTELPRLEALDLSYNSQ-PFGMQG-VGHNF 722
Query: 187 --LVHLDSL-DLSNCH--LKGPLSEDAFVNATKLRTLYLSGNPL----SAADLSVAL-KP 236
+ HL +L LS H + +S+ + +T LR L SGN L + DL + +
Sbjct: 723 SFVAHLRTLRHLSLAHNNIHSQVSQQ--LCSTSLRALDFSGNALGHMWAEGDLYLHFFQG 780
Query: 237 LTKLHRLSLRNCGLSRLPANTFHRFT-CLQELDISHNPLIDAFTALLSPLESLEHLDMGY 295
L+ L L L L L T LQ L + N L L L LE LD+
Sbjct: 781 LSGLIWLDLSQNRLHTLLPQTLRNLPKSLQVLRLRDNYLAFFKWWSLHFLPKLEVLDLAG 840
Query: 296 SNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFH 355
+ L+ ++ + T L+ L +S N + + G F L L L+ L ++ + F
Sbjct: 841 NQLKALTNGSLPAGTRLRRLDVSCNSISFVAPGFFSKAKELRELNLSANALKTVDHSWFG 900
Query: 356 ENYTYPDLEELRLSGNPLH 374
+ L+ L +S NPLH
Sbjct: 901 PLASA--LQILDVSANPLH 917
>UNIPROTKB|F1P9F0 [details] [associations]
symbol:LGR4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016500 "protein-hormone receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002131 InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237
PRINTS:PR00373 PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021
InterPro:IPR003591 SMART:SM00369 GO:GO:0016500
GeneTree:ENSGT00650000092962 OMA:DGYWSDC EMBL:AAEX03013024
Ensembl:ENSCAFT00000016178 Uniprot:F1P9F0
Length = 905
Score = 233 (87.1 bits), Expect = 9.2e-16, P = 9.2e-16
Identities = 91/344 (26%), Positives = 159/344 (46%)
Query: 19 LITINLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLR 77
L ++ L+AN I V E +F L +L++ + +L ++ +NL TL L L+ N +
Sbjct: 85 LQSLRLDANHITSVPEDSFEGLAQLRHLWLDDNSLMEVPVHPLSNLPTLQALTLALNKIS 144
Query: 78 IIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNL 137
I F L+SL L L+ + + FD L++L+TL+L+ N L ++ + L
Sbjct: 145 SIPDYAFTNLSSLVVLHLHNNKIKNLGQHCFDGLDNLETLDLNYNNLG---EFPQAIKAL 201
Query: 138 GKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSN 197
L L + IS +PD F N LR ++L +N L + +G + H S DL +
Sbjct: 202 PSLKELLFHSNSISVIPDGAFDGNPLLRTIHLYDNPL------SFVGNSAFHNLS-DLHS 254
Query: 198 CHLKGPLSEDAFVNAT---KLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLP 254
++G F N T L +L L+G +S+ ++ + L L L + LP
Sbjct: 255 LVIRGASMVQQFPNLTGTVHLESLTLTGTKISSISSNLCQEQ-KMLRTLDLSYNSIKDLP 313
Query: 255 ANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKT 314
+ F L+E+ + N + L SL LD+ + + I F K+ S+
Sbjct: 314 S--FDGCHALEEISLQRNQIHQIKEGTFQGLVSLRILDLSRNQIHEIHNRAFAKLGSITN 371
Query: 315 LILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENY 358
L +S N+L + + + L+ L+ L+L G +L E + +++
Sbjct: 372 LDISFNELTSFPT---EGLSGLNQLKL--VGNLKLKEALAAKDF 410
Score = 220 (82.5 bits), Expect = 2.4e-14, P = 2.4e-14
Identities = 107/391 (27%), Positives = 170/391 (43%)
Query: 52 LSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNL 111
++++ F N L +L L+GN L I P L L+ L L L + A L
Sbjct: 23 ITQLPEDAFKNFPFLEELRLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAIRGL 82
Query: 112 NHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAE 171
+ L++L L N + S + + L +L L L + + +P + +N L+ L LA
Sbjct: 83 SALQSLRLDANHITSVPEDSFE--GLAQLRHLWLDDNSLMEVPVHPLSNLPTLQALTLAL 140
Query: 172 NELIDL-DVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADL 230
N++ + D A T NL L L L N +K L + F L TL L+ N L +
Sbjct: 141 NKISSIPDYAFT---NLSSLVVLHLHNNKIKN-LGQHCFDGLDNLETLDLNYNNLG--EF 194
Query: 231 SVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEH 290
A+K L L L + +S +P F L+ + + NPL + L L
Sbjct: 195 PQAIKALPSLKELLFHSNSISVIPDGAFDGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHS 254
Query: 291 LDM-GYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRL 349
L + G S +Q+ T L++L L+G K+ ++ S L Q L L+L+ + L
Sbjct: 255 LVIRGASMVQQFPNLT--GTVHLESLTLTGTKISSISSNLCQEQKMLRTLDLSYNSIKDL 312
Query: 350 NETVFHENYTYPDLEELRLSGNPLHVLPDSTKQ--YSMRTIP---TQIWK--NFDFLVIL 402
F + LEE+ L N +H + + T Q S+R + QI + N F +
Sbjct: 313 PS--FDGCHA---LEEISLQRNQIHQIKEGTFQGLVSLRILDLSRNQIHEIHNRAFAKLG 367
Query: 403 FILNETV-FHENYTYPD-----LEELRLSGN 427
I N + F+E ++P L +L+L GN
Sbjct: 368 SITNLDISFNELTSFPTEGLSGLNQLKLVGN 398
Score = 210 (79.0 bits), Expect = 2.9e-13, P = 2.9e-13
Identities = 101/359 (28%), Positives = 159/359 (44%)
Query: 17 PGLITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPL 76
P L I++N N Q E AF L L + LS I+P+ + L L L L N L
Sbjct: 13 PALRDISMN-NITQLPEDAFKNFPFLEELRLAGNDLSFIHPKALSGLKELKVLTLQNNQL 71
Query: 77 RIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGN 136
+ + L++L+ L L+ ++T + +F+ L L+ L L N L + L N
Sbjct: 72 KTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLAQLRHLWLDDNSLME-VP-VHPLSN 129
Query: 137 LGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLS 196
L L L L + IS++PD F N + L L+L N++ +L G L +L++LDL+
Sbjct: 130 LPTLQALTLALNKISSIPDYAFTNLSSLVVLHLHNNKIKNLGQHCFDG--LDNLETLDLN 187
Query: 197 NCHLKGPLSEDAFVNATKLRTLYLSGNPLSAA-DLSVALKPLTKLHRLSLRNCGLSRLPA 255
+L G + A L+ L N +S D + PL L + L + LS +
Sbjct: 188 YNNL-GEFPQ-AIKALPSLKELLFHSNSISVIPDGAFDGNPL--LRTIHLYDNPLSFVGN 243
Query: 256 NTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTL 315
+ FH + L L I ++ F L + LE L + + + IS + + L+TL
Sbjct: 244 SAFHNLSDLHSLVIRGASMVQQFPNLTGTVH-LESLTLTGTKISSISSNLCQEQKMLRTL 302
Query: 316 ILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLH 374
LS N ++ L S F L + L + ++ E F + L L LS N +H
Sbjct: 303 DLSYNSIKDLPS--FDGCHALEEISLQRNQIHQIKEGTFQGLVS---LRILDLSRNQIH 356
Score = 168 (64.2 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 74/280 (26%), Positives = 116/280 (41%)
Query: 204 LSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTC 263
L EDAF N L L L+GN LS AL L +L L+L+N L +P+ +
Sbjct: 26 LPEDAFKNFPFLEELRLAGNDLSFIHPK-ALSGLKELKVLTLQNNQLKTVPSEAIRGLSA 84
Query: 264 LQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLE 323
LQ L + N + L L HL + ++L + + +L+ L L+ NK+
Sbjct: 85 LQSLRLDANHITSVPEDSFEGLAQLRHLWLDDNSLMEVPVHPLSNLPTLQALTLALNKIS 144
Query: 324 TLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQY 383
++ F NL+ L VL L+N + L + F +LE L L+ N L P + K
Sbjct: 145 SIPDYAFTNLSSLVVLHLHNNKIKNLGQHCFDG---LDNLETLDLNYNNLGEFPQAIK-- 199
Query: 384 SMRTIPTQIWKNFDFLVILFILNETVFHENYTYPDLEELRLSGNPLHVLPTGNXXXXXXX 443
++ ++ ++ + VI + F N P L + L NPL + GN
Sbjct: 200 ALPSLKELLFHSNSISVI----PDGAFDGN---PLLRTIHLYDNPLSFV--GNSAFHNLS 250
Query: 444 XXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNLSMTS 483
+ PN+ T ++ SL L +S S
Sbjct: 251 DLHSLVIRGASMVQQFPNL-TGTVHLESLTLTGTKISSIS 289
Score = 153 (58.9 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 88/387 (22%), Positives = 155/387 (40%)
Query: 111 LNHLKTL-ELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNL 169
LN L L ++S N + + N L+ L L + +S + + L+ L L
Sbjct: 9 LNSLPALRDISMNNITQLPEDAFK--NFPFLEELRLAGNDLSFIHPKALSGLKELKVLTL 66
Query: 170 AENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAAD 229
N+L + G L L SL L H+ + ED+F +LR L+L N L
Sbjct: 67 QNNQLKTVPSEAIRG--LSALQSLRLDANHITS-VPEDSFEGLAQLRHLWLDDNSL---- 119
Query: 230 LSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISH---NPLIDAFTALLSPLE 286
+ V + PL+ L L L+++ + + FT L L + H N + + L+
Sbjct: 120 MEVPVHPLSNLPTLQALTLALNKISSIPDYAFTNLSSLVVLHLHNNKIKNLGQHCFDGLD 179
Query: 287 SLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGL 346
+LE LD+ Y+NL ++ + SLK L+ N + + G F L + L + L
Sbjct: 180 NLETLDLNYNNLGEFPQA-IKALPSLKELLFHSNSISVIPDGAFDGNPLLRTIHLYDNPL 238
Query: 347 TRLNETVFHENYTYPDLEELRLSG-NPLHVLPDSTKQYSMRTIP------TQIWKNFDFL 399
+ + + FH N + DL L + G + + P+ T + ++ + I N
Sbjct: 239 SFVGNSAFH-NLS--DLHSLVIRGASMVQQFPNLTGTVHLESLTLTGTKISSISSNLCQE 295
Query: 400 VILFILNETVFHENYTYPD------LEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXC 453
+ + ++ P LEE+ L N +H + G
Sbjct: 296 QKMLRTLDLSYNSIKDLPSFDGCHALEEISLQRNQIHQIKEGTFQGLVSLRILDLSRN-- 353
Query: 454 KIDYLPPNVFNNTRNITSLNLANNNLS 480
+I + F +IT+L+++ N L+
Sbjct: 354 QIHEIHNRAFAKLGSITNLDISFNELT 380
Score = 133 (51.9 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 60/260 (23%), Positives = 109/260 (41%)
Query: 232 VALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHL 291
+ L L L +S+ N +++LP + F F L+EL ++ N L LS L+ L+ L
Sbjct: 7 ITLNSLPALRDISMNN--ITQLPEDAFKNFPFLEELRLAGNDLSFIHPKALSGLKELKVL 64
Query: 292 DMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNE 351
+ + L+ + +++L++L L N + ++ F+ L L L L++ L E
Sbjct: 65 TLQNNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLAQLRHLWLDD---NSLME 121
Query: 352 TVFHENYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFH 411
H P L+ L L+ N + +PD Y+ + N LV+L + N + +
Sbjct: 122 VPVHPLSNLPTLQALTLALNKISSIPD----YA--------FTNLSSLVVLHLHNNKIKN 169
Query: 412 -ENYTYP---DLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTR 467
+ + +LE L L+ N L P I +P F+
Sbjct: 170 LGQHCFDGLDNLETLDLNYNNLGEFPQAIKALPSLKELLFHSNS---ISVIPDGAFDGNP 226
Query: 468 NITSLNLANNNLSMTSELSF 487
+ +++L +N LS +F
Sbjct: 227 LLRTIHLYDNPLSFVGNSAF 246
Score = 122 (48.0 bits), Expect = 0.00096, P = 0.00095
Identities = 59/209 (28%), Positives = 89/209 (42%)
Query: 16 NPGLITINLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGN 74
NP L TI+L NP+ V AF L L ++ ++ + P T L L L+G
Sbjct: 225 NPLLRTIHLYDNPLSFVGNSAFHNLSDLHSLVIRGASMVQQFPNL-TGTVHLESLTLTGT 283
Query: 75 PLRIIEPGVFDPLTSLEYLMLNRCNLTYIS----PSAFDNLNHLKTLELSQNKLKSHIDW 130
+ I + E ML +L+Y S PS FD + L+ + L +N++ +
Sbjct: 284 KISSISSNLCQ-----EQKMLRTLDLSYNSIKDLPS-FDGCHALEEISLQRNQIHQIKEG 337
Query: 131 TLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHL 190
T L L LDL ++ I + + FA + NL+++ NEL G N + L
Sbjct: 338 TFQ--GLVSLRILDLSRNQIHEIHNRAFAKLGSITNLDISFNELTSFPTEGLSGLNQLKL 395
Query: 191 DSLDLSNCHLKGPLSEDAFVNATKLRTLY 219
+ N LK L+ FVN L Y
Sbjct: 396 ----VGNLKLKEALAAKDFVNLRSLSVPY 420
>UNIPROTKB|Q6UXM1 [details] [associations]
symbol:LRIG3 "Leucine-rich repeats and immunoglobulin-like
domains protein 3" species:9606 "Homo sapiens" [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0030659 "cytoplasmic vesicle membrane"
evidence=IEA] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 InterPro:IPR025875 Pfam:PF12799 CleanEx:HS_LIG3
HOGENOM:HOG000113380 HOVERGEN:HBG052353 EMBL:AY505340 EMBL:AY358288
EMBL:AY358295 EMBL:AK074921 IPI:IPI00184265 IPI:IPI00640455
RefSeq:NP_001129523.1 RefSeq:NP_700356.2 UniGene:Hs.253736
ProteinModelPortal:Q6UXM1 SMR:Q6UXM1 STRING:Q6UXM1
PhosphoSite:Q6UXM1 DMDM:73621176 PaxDb:Q6UXM1 PRIDE:Q6UXM1
Ensembl:ENST00000320743 Ensembl:ENST00000379141 GeneID:121227
KEGG:hsa:121227 UCSC:uc001sqr.3 UCSC:uc009zqh.3 CTD:121227
GeneCards:GC12M059265 HGNC:HGNC:30991 HPA:HPA010773 MIM:608870
neXtProt:NX_Q6UXM1 PharmGKB:PA134864136 InParanoid:Q6UXM1
OMA:SHHQFVT OrthoDB:EOG4K6G3K PhylomeDB:Q6UXM1 GenomeRNAi:121227
NextBio:80680 ArrayExpress:Q6UXM1 Bgee:Q6UXM1 CleanEx:HS_LRIG3
Genevestigator:Q6UXM1 GermOnline:ENSG00000139263 Uniprot:Q6UXM1
Length = 1119
Score = 234 (87.4 bits), Expect = 9.7e-16, P = 9.7e-16
Identities = 82/309 (26%), Positives = 148/309 (47%)
Query: 19 LITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLT-TLNKLDLSGNPLR 77
L T++L++N I ++ AF A L YLY+ ++ + P +F NL TL L L+ N +
Sbjct: 147 LETLDLSSNNISELQTAF-PALQLKYLYLNSNRVTSMEPGYFDNLANTLLVLKLNRNRIS 205
Query: 78 IIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNL 137
I P +F L L++L LNR + + F L LK+L++ +N + +D L
Sbjct: 206 AIPPKMFK-LPQLQHLELNRNKIKNVDGLTFQGLGALKSLKMQRNGVTKLMDGAF--WGL 262
Query: 138 GKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSN 197
++ L L + ++ + L+ L+L++N + ++ + L LDL+
Sbjct: 263 SNMEILQLDHNNLTEITKGWLYGLLMLQELHLSQNAINR--ISPDAWEFCQKLSELDLTF 320
Query: 198 CHLKGPLSEDAFVNATKLRTLYLSGNPLS-AADLSVALKPLTKLHRLSLRNCGLSRLPAN 256
HL L + +F+ + L TL++ N +S AD A + L+ L L L+N +S +
Sbjct: 321 NHLSR-LDDSSFLGLSLLNTLHIGNNRVSYIADC--AFRGLSSLKTLDLKNNEISWTIED 377
Query: 257 ---TFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLK 313
F L+ L + N + + L++LEHLD+ + + + + F +M L+
Sbjct: 378 MNGAFSGLDKLRRLILQGNRIRSITKKAFTGLDALEHLDLSDNAIMSLQGNAFSQMKKLQ 437
Query: 314 TLILSGNKL 322
L L+ + L
Sbjct: 438 QLHLNTSSL 446
Score = 221 (82.9 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 91/356 (25%), Positives = 161/356 (45%)
Query: 22 INLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEP 81
+ LN N ++ + V+ ++ L + + +I P+ +L LDLS N + ++
Sbjct: 103 VKLNNNELETIPNLGPVSANITLLSLAGNRIVEILPEHLKEFQSLETLDLSSNNISELQT 162
Query: 82 GVFDPLTSLEYLMLNRCNLTYISPSAFDNL-NHLKTLELSQNKLKSHIDWTLVLGNLGKL 140
P L+YL LN +T + P FDNL N L L+L++N++ S I + L +L
Sbjct: 163 AF--PALQLKYLYLNSNRVTSMEPGYFDNLANTLLVLKLNRNRI-SAIPPKMF--KLPQL 217
Query: 141 DTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHL 200
L+L ++ I N+ F L++L + N + L G L +++ L L + +L
Sbjct: 218 QHLELNRNKIKNVDGLTFQGLGALKSLKMQRNGVTKLMDGAFWG--LSNMEILQLDHNNL 275
Query: 201 KGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHR 260
+++ L+ L+LS N ++ A + KL L L LSRL ++F
Sbjct: 276 T-EITKGWLYGLLMLQELHLSQNAINRISPD-AWEFCQKLSELDLTFNHLSRLDDSSFLG 333
Query: 261 FTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQ-RIS--RSTFLKMTSLKTLIL 317
+ L L I +N + L SL+ LD+ + + I F + L+ LIL
Sbjct: 334 LSLLNTLHIGNNRVSYIADCAFRGLSSLKTLDLKNNEISWTIEDMNGAFSGLDKLRRLIL 393
Query: 318 SGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPL 373
GN++ ++ F L L L+L++ + L F + L++L L+ + L
Sbjct: 394 QGNRIRSITKKAFTGLDALEHLDLSDNAIMSLQGNAFSQ---MKKLQQLHLNTSSL 446
Score = 201 (75.8 bits), Expect = 3.6e-12, P = 3.6e-12
Identities = 77/274 (28%), Positives = 118/274 (43%)
Query: 6 PVYNDRRNLDNPGLITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTT 65
P Y D NL N L+ + LN N I + L +L + + ++ F L
Sbjct: 184 PGYFD--NLANT-LLVLKLNRNRISAIPPKMFKLPQLQHLELNRNKIKNVDGLTFQGLGA 240
Query: 66 LNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLK 125
L L + N + + G F L+++E L L+ NLT I+ L L+ L LSQN +
Sbjct: 241 LKSLKMQRNGVTKLMDGAFWGLSNMEILQLDHNNLTEITKGWLYGLLMLQELHLSQNAIN 300
Query: 126 --SHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTL 183
S W KL LDL + +S L D+ F + L L++ N + +A
Sbjct: 301 RISPDAWEFCQ----KLSELDLTFNHLSRLDDSSFLGLSLLNTLHIGNNRVSY--IADCA 354
Query: 184 GQNLVHLDSLDLSNCHLKGPLSE--DAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLH 241
+ L L +LDL N + + + AF KLR L L GN + + A L L
Sbjct: 355 FRGLSSLKTLDLKNNEISWTIEDMNGAFSGLDKLRRLILQGNRIRSITKK-AFTGLDALE 413
Query: 242 RLSLRNCGLSRLPANTFHRFTCLQELDISHNPLI 275
L L + + L N F + LQ+L ++ + L+
Sbjct: 414 HLDLSDNAIMSLQGNAFSQMKKLQQLHLNTSSLL 447
Score = 171 (65.3 bits), Expect = 6.4e-09, P = 6.4e-09
Identities = 78/325 (24%), Positives = 140/325 (43%)
Query: 52 LSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNL 111
LS I ++L +L ++ L+ N L I P + ++ L L + I P
Sbjct: 86 LSFIKASSMSHLQSLREVKLNNNELETI-PNLGPVSANITLLSLAGNRIVEILPEHLKEF 144
Query: 112 NHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFAN--NTWLRNLNL 169
L+TL+LS N + + L +L L L + ++++ F N NT L L L
Sbjct: 145 QSLETLDLSSNNIS---ELQTAFPAL-QLKYLYLNSNRVTSMEPGYFDNLANTLLV-LKL 199
Query: 170 AENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAAD 229
N + + L L L+L+ +K + F L++L + N ++
Sbjct: 200 NRNRISAIPPKMF---KLPQLQHLELNRNKIKN-VDGLTFQGLGALKSLKMQRNGVTKL- 254
Query: 230 LSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLE 289
+ A L+ + L L + L+ + + LQEL +S N + + L
Sbjct: 255 MDGAFWGLSNMEILQLDHNNLTEITKGWLYGLLMLQELHLSQNAINRISPDAWEFCQKLS 314
Query: 290 HLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRL 349
LD+ +++L R+ S+FL ++ L TL + N++ + F+ L+ L L+L N +
Sbjct: 315 ELDLTFNHLSRLDDSSFLGLSLLNTLHIGNNRVSYIADCAFRGLSSLKTLDLKN---NEI 371
Query: 350 NETVFHENYTYPDLEELR---LSGN 371
+ T+ N + L++LR L GN
Sbjct: 372 SWTIEDMNGAFSGLDKLRRLILQGN 396
Score = 155 (59.6 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 59/218 (27%), Positives = 109/218 (50%)
Query: 22 INLNANPIQPVEGAFLVARSLLY-LYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIE 80
+ L+ N + + +L +L L++ + +++I+P + L++LDL+ N L ++
Sbjct: 268 LQLDHNNLTEITKGWLYGLLMLQELHLSQNAINRISPDAWEFCQKLSELDLTFNHLSRLD 327
Query: 81 PGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHI-DWTLVLGNLGK 139
F L+ L L + ++YI+ AF L+ LKTL+L N++ I D L K
Sbjct: 328 DSSFLGLSLLNTLHIGNNRVSYIADCAFRGLSSLKTLDLKNNEISWTIEDMNGAFSGLDK 387
Query: 140 LDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDV-ATTLGQNL--VHLDSLDL- 195
L L L+ + I ++ F L +L+L++N ++ L A + + L +HL++ L
Sbjct: 388 LRRLILQGNRIRSITKKAFTGLDALEHLDLSDNAIMSLQGNAFSQMKKLQQLHLNTSSLL 447
Query: 196 SNCHLKG-P--LSED---AFVNATKLRTLYLSGNPLSA 227
+C LK P ++E+ +FVNA+ L G + A
Sbjct: 448 CDCQLKWLPQWVAENNFQSFVNASCAHPQLLKGRSIFA 485
Score = 146 (56.5 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 66/272 (24%), Positives = 124/272 (45%)
Query: 85 DPLTS-LEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTL 143
+PL S + L L+ L++I S+ +L L+ ++L+ N+L++ + V N+ L
Sbjct: 70 EPLPSWVARLDLSHNRLSFIKASSMSHLQSLREVKLNNNELETIPNLGPVSANITLLSLA 129
Query: 144 DLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVA-TTLGQNLVHLDSLDLSNCHLKG 202
R I LP+++ + L L+L+ N + +L A L ++L+S +++
Sbjct: 130 GNRIVEI--LPEHLKEFQS-LETLDLSSNNISELQTAFPALQLKYLYLNSNRVTSME--- 183
Query: 203 PLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFT 262
P D N L L L+ N +SA + + L +L L L + + TF
Sbjct: 184 PGYFDNLANT--LLVLKLNRNRISA--IPPKMFKLPQLQHLELNRNKIKNVDGLTFQGLG 239
Query: 263 CLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKL 322
L+ L + N + L ++E L + ++NL I++ + L+ L LS N +
Sbjct: 240 ALKSLKMQRNGVTKLMDGAFWGLSNMEILQLDHNNLTEITKGWLYGLLMLQELHLSQNAI 299
Query: 323 ETLESGLFQNLTHLSVLELNNCGLTRLNETVF 354
+ ++ LS L+L L+RL+++ F
Sbjct: 300 NRISPDAWEFCQKLSELDLTFNHLSRLDDSSF 331
Score = 146 (56.5 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 72/288 (25%), Positives = 122/288 (42%)
Query: 68 KLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSH 127
+LDLS N L I+ L SL + LN L I P+ ++ L L+ N++
Sbjct: 78 RLDLSHNRLSFIKASSMSHLQSLREVKLNNNELETI-PNLGPVSANITLLSLAGNRIVEI 136
Query: 128 IDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNL 187
+ L L+TLDL + IS L F L+ L L N + ++ NL
Sbjct: 137 LPEHLK--EFQSLETLDLSSNNISEL-QTAFPA-LQLKYLYLNSNRVTSMEPGYF--DNL 190
Query: 188 VH-LDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLR 246
+ L L L+ + + F +L+ L L+ N + D + + L L L ++
Sbjct: 191 ANTLLVLKLNRNRISA-IPPKMF-KLPQLQHLELNRNKIKNVD-GLTFQGLGALKSLKMQ 247
Query: 247 NCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTF 306
G+++L F + ++ L + HN L + L L L+ L + + + RIS +
Sbjct: 248 RNGVTKLMDGAFWGLSNMEILQLDHNNLTEITKGWLYGLLMLQELHLSQNAINRISPDAW 307
Query: 307 LKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVF 354
L L L+ N L L+ F L+ L+ L + N ++ + + F
Sbjct: 308 EFCQKLSELDLTFNHLSRLDDSSFLGLSLLNTLHIGNNRVSYIADCAF 355
Score = 126 (49.4 bits), Expect = 0.00046, P = 0.00046
Identities = 71/289 (24%), Positives = 126/289 (43%)
Query: 218 LYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDA 277
L LS N LS S ++ L L + L N L +P N + L ++ N +++
Sbjct: 79 LDLSHNRLSFIKAS-SMSHLQSLREVKLNNNELETIP-NLGPVSANITLLSLAGNRIVEI 136
Query: 278 FTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTH-L 336
L +SLE LD+ +N+ + T LK L L+ N++ ++E G F NL + L
Sbjct: 137 LPEHLKEFQSLETLDLSSNNISELQ--TAFPALQLKYLYLNSNRVTSMEPGYFDNLANTL 194
Query: 337 SVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQY--SMRTIPTQ--- 391
VL+LN ++ + +F P L+ L L+ N + + T Q +++++ Q
Sbjct: 195 LVLKLNRNRISAIPPKMFK----LPQLQHLELNRNKIKNVDGLTFQGLGALKSLKMQRNG 250
Query: 392 IWKNFD--F--LVILFIL-----NETVFHENYTYP--DLEELRLSGNPLH-VLPTGNXXX 439
+ K D F L + IL N T + + Y L+EL LS N ++ + P
Sbjct: 251 VTKLMDGAFWGLSNMEILQLDHNNLTEITKGWLYGLLMLQELHLSQNAINRISPDAWEFC 310
Query: 440 XXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSFQ 488
++D + F + +L++ NN +S ++ +F+
Sbjct: 311 QKLSELDLTFNHLSRLD---DSSFLGLSLLNTLHIGNNRVSYIADCAFR 356
>FB|FBgn0262473 [details] [associations]
symbol:Tl "Toll" species:7227 "Drosophila melanogaster"
[GO:0019730 "antimicrobial humoral response" evidence=IGI]
[GO:0019732 "antifungal humoral response" evidence=IMP] [GO:0006963
"positive regulation of antibacterial peptide biosynthetic process"
evidence=IMP] [GO:0006967 "positive regulation of antifungal
peptide biosynthetic process" evidence=IMP] [GO:0004888
"transmembrane signaling receptor activity" evidence=IEA;NAS]
[GO:0008063 "Toll signaling pathway" evidence=IEA;NAS] [GO:0005887
"integral to plasma membrane" evidence=NAS] [GO:0006952 "defense
response" evidence=NAS;TAS] [GO:0009950 "dorsal/ventral axis
specification" evidence=IMP;NAS;TAS] [GO:0030097 "hemopoiesis"
evidence=TAS] [GO:0007416 "synapse assembly" evidence=IMP]
[GO:0006955 "immune response" evidence=TAS] [GO:0009620 "response
to fungus" evidence=TAS] [GO:0016021 "integral to membrane"
evidence=NAS] [GO:0009880 "embryonic pattern specification"
evidence=TAS] [GO:0070976 "TIR domain binding" evidence=IPI]
[GO:0009617 "response to bacterium" evidence=NAS] [GO:0050832
"defense response to fungus" evidence=TAS] [GO:0045087 "innate
immune response" evidence=IDA;NAS;TAS] [GO:0019955 "cytokine
binding" evidence=TAS] [GO:0050830 "defense response to
Gram-positive bacterium" evidence=IEA;TAS] [GO:0035007 "regulation
of melanization defense response" evidence=TAS] [GO:0035172
"hemocyte proliferation" evidence=IMP;TAS] [GO:0000910
"cytokinesis" evidence=IMP] [GO:0007352 "zygotic specification of
dorsal/ventral axis" evidence=IEA;NAS] [GO:0045610 "regulation of
hemocyte differentiation" evidence=IMP] [GO:0007507 "heart
development" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043234 "protein complex" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0033565 "ESCRT-0
complex" evidence=IDA] [GO:0016201 "synaptic target inhibition"
evidence=IMP] [GO:0009897 "external side of plasma membrane"
evidence=IDA] Pfam:PF00560 InterPro:IPR000157 InterPro:IPR001611
InterPro:IPR027202 Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450
SMART:SM00255 EMBL:AE014297 GO:GO:0016021 GO:GO:0007507
GO:GO:0009897 GO:GO:0050830 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007155
GO:GO:0045087 GO:GO:0000910 GO:GO:0007416 GO:GO:0019732
GO:GO:0030097 GO:GO:0019955 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0004888 GO:GO:0008063 GO:GO:0006963
GO:GO:0035172 GO:GO:0006967 GeneTree:ENSGT00700000104286
GO:GO:0007352 GO:GO:0045610 GO:GO:0033565 SUPFAM:SSF52200
GO:GO:0016201 EMBL:M19969 EMBL:BT031153 EMBL:AY349649 EMBL:AY349650
EMBL:AY349651 EMBL:AY349652 EMBL:AY349653 EMBL:AY349654
EMBL:AY349655 EMBL:AY121616 PIR:A29943 RefSeq:NP_524518.1
RefSeq:NP_733166.1 UniGene:Dm.2347 ProteinModelPortal:P08953
SMR:P08953 DIP:DIP-34358N IntAct:P08953 STRING:P08953 PaxDb:P08953
PRIDE:P08953 EnsemblMetazoa:FBtr0085059 EnsemblMetazoa:FBtr0330155
GeneID:43222 KEGG:dme:Dmel_CG5490 CTD:109651 FlyBase:FBgn0262473
InParanoid:P08953 OMA:STNDICP OrthoDB:EOG4SF7MS PhylomeDB:P08953
ChiTaRS:Tl GenomeRNAi:43222 NextBio:832799 Bgee:P08953
GermOnline:CG5490 PANTHER:PTHR24371:SF0 Uniprot:P08953
Length = 1097
Score = 205 (77.2 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 100/389 (25%), Positives = 168/389 (43%)
Query: 52 LSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNL 111
L+ I T++ L+ L+L N + + +FD L +LE + L + F +
Sbjct: 162 LTHIPANLLTDMRNLSHLELRAN-IEEMPSHLFDDLENLESIEFGSNKLRQMPRGIFGKM 220
Query: 112 NHLKTLELSQNKLKS---HIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLN 168
LK L L N+L + H D+ LG +D+ +GI LP +VFA+ T + ++N
Sbjct: 221 PKLKQLNLWSNQLHNLTKH-DFEGATSVLG----IDIHDNGIEQLPHDVFAHLTNVTDIN 275
Query: 169 LAENELIDLDVATTLGQNLVHLDSLDLSNCHLK-GPLSEDAFVNATKLRTLYLSGNPLSA 227
L+ N L L + HL+ + L N + L F N +L+ L L S
Sbjct: 276 LSANLFRSLPQG--LFDHNKHLNEVRLMNNRVPLATLPSRLFANQPELQILRLRAELQSL 333
Query: 228 -ADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLE 286
DL + T++ +SL + L LPA L LD+S+N L +L +
Sbjct: 334 PGDL---FEHSTQITNISLGDNLLKTLPATLLEHQVNLLSLDLSNNRLTHLPDSLFAHTT 390
Query: 287 SLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLF---QNLTHLSV----L 339
+L L + + L IS F + +L TL++S N+L T++S F L HL + +
Sbjct: 391 NLTDLRLEDNLLTGISGDIFSNLGNLVTLVMSRNRLRTIDSRAFVSTNGLRHLHLDHNDI 450
Query: 340 ELNNCGLTRLNETVFHENYTYPD-LEELRLSGNPLHVLPDSTKQYSMRTIPTQI-WKNFD 397
+L L + +T + + Y L L L N + + + K ++ + + N
Sbjct: 451 DLQQPLLDIMLQTQINSPFGYMHGLLTLNLRNNSIIFVYNDWKNTMLQLRELDLSYNNIS 510
Query: 398 FLVI--LFILNETVFHENYTYPDLEELRL 424
L L L++ H N T+ + + L
Sbjct: 511 SLGYEDLAFLSQNRLHVNMTHNKIRRIAL 539
Score = 195 (73.7 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 101/385 (26%), Positives = 169/385 (43%)
Query: 7 VYNDRRNLDNPGLITINLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTT 65
+++D NL++ I +N ++ + G F L L + L + F T+
Sbjct: 192 LFDDLENLES-----IEFGSNKLRQMPRGIFGKMPKLKQLNLWSNQLHNLTKHDFEGATS 246
Query: 66 LNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSA-FDNLNHLKTLELSQNKL 124
+ +D+ N + + VF LT++ + L+ NL P FD+ HL + L N++
Sbjct: 247 VLGIDIHDNGIEQLPHDVFAHLTNVTDINLS-ANLFRSLPQGLFDHNKHLNEVRLMNNRV 305
Query: 125 KSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLG 184
+ + N +L L LR + +LP ++F ++T + N++L +N L L TL
Sbjct: 306 PLATLPSRLFANQPELQILRLRAE-LQSLPGDLFEHSTQITNISLGDNLLKTLPA--TLL 362
Query: 185 QNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLS 244
++ V+L SLDLSN L L + F + T L L L N L+ + L L L
Sbjct: 363 EHQVNLLSLDLSNNRLTH-LPDSLFAHTTNLTDLRLEDNLLTGISGDI-FSNLGNLVTLV 420
Query: 245 LRNCGLSRLPANTFHRFTCLQELDISHN------PLIDAF--TALLSP---LESLEHLDM 293
+ L + + F L+ L + HN PL+D T + SP + L L++
Sbjct: 421 MSRNRLRTIDSRAFVSTNGLRHLHLDHNDIDLQQPLLDIMLQTQINSPFGYMHGLLTLNL 480
Query: 294 GYSNLQRISRSTFLKMTSLKTLILSGNKLETL--ESGLF--QNLTHLSVLELNNCGLTRL 349
+++ + M L+ L LS N + +L E F QN H+++ N L
Sbjct: 481 RNNSIIFVYNDWKNTMLQLRELDLSYNNISSLGYEDLAFLSQNRLHVNMTH-NKIRRIAL 539
Query: 350 NETV-FHENYTYPDLEELRLSGNPL 373
E V E Y +L + L+ NPL
Sbjct: 540 PEDVHLGEGYNN-NLVHVDLNDNPL 563
Score = 161 (61.7 bits), Expect = 5.9e-11, Sum P(2) = 5.9e-11
Identities = 73/314 (23%), Positives = 139/314 (44%)
Query: 190 LDSLDLSNCHLKG--PLSEDA-FVNATKLRTLYLSGNPLSAADLSVALKPLTKLH---RL 243
+D + + C L G P++ ++ TL + L +++ + L +LH R
Sbjct: 99 VDRVQMRRCMLPGHTPIASILDYLGIVSPTTLIFESDNLG---MNITRQHLDRLHGLKRF 155
Query: 244 SLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISR 303
L+ +PAN L L++ N + + + L LE+LE ++ G + L+++ R
Sbjct: 156 RFTTRRLTHIPANLLTDMRNLSHLELRAN-IEEMPSHLFDDLENLESIEFGSNKLRQMPR 214
Query: 304 STFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDL 363
F KM LK L L N+L L F+ T + +++++ G+ +L VF + T ++
Sbjct: 215 GIFGKMPKLKQLNLWSNQLHNLTKHDFEGATSVLGIDIHDNGIEQLPHDVF-AHLT--NV 271
Query: 364 EELRLSGNPLHVLP----DSTKQYS----------MRTIPTQIWKNFDFLVILFILNE-- 407
++ LS N LP D K + + T+P++++ N L IL + E
Sbjct: 272 TDINLSANLFRSLPQGLFDHNKHLNEVRLMNNRVPLATLPSRLFANQPELQILRLRAELQ 331
Query: 408 TVFHENYTYP-DLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNT 466
++ + + + + + L N L LP ++ +LP ++F +T
Sbjct: 332 SLPGDLFEHSTQITNISLGDNLLKTLPA--TLLEHQVNLLSLDLSNNRLTHLPDSLFAHT 389
Query: 467 RNITSLNLANNNLS 480
N+T L L +N L+
Sbjct: 390 TNLTDLRLEDNLLT 403
Score = 143 (55.4 bits), Expect = 5.0e-09, Sum P(2) = 5.0e-09
Identities = 75/300 (25%), Positives = 131/300 (43%)
Query: 85 DPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQN--KLKSHIDWTLVLGNLGKLDT 142
D L L+ LT+I + ++ +L LEL N ++ SH+ +L L++
Sbjct: 147 DRLHGLKRFRFTTRRLTHIPANLLTDMRNLSHLELRANIEEMPSHL-----FDDLENLES 201
Query: 143 LDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKG 202
++ + + +P +F L+ LNL N+L +L G V +D+ + ++
Sbjct: 202 IEFGSNKLRQMPRGIFGKMPKLKQLNLWSNQLHNLTKHDFEGATSVL--GIDIHDNGIE- 258
Query: 203 PLSEDAFVNATKLRTLYLSGNPLSAADLSVA--LKPLTKLHRLSLRNCGLSRLPANTFHR 260
L D F + T + + LS N + + K L ++ RL L+ LP+ F
Sbjct: 259 QLPHDVFAHLTNVTDINLSANLFRSLPQGLFDHNKHLNEV-RLMNNRVPLATLPSRLFAN 317
Query: 261 FTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLK-MTSLKTLILSG 319
LQ L + L L + ++ +G NL + +T L+ +L +L LS
Sbjct: 318 QPELQILRLRAE-LQSLPGDLFEHSTQITNISLG-DNLLKTLPATLLEHQVNLLSLDLSN 375
Query: 320 NKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDS 379
N+L L LF + T+L+ L L + LT ++ +F +L L +S N L + DS
Sbjct: 376 NRLTHLPDSLFAHTTNLTDLRLEDNLLTGISGDIFSN---LGNLVTLVMSRNRLRTI-DS 431
Score = 117 (46.2 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 55/253 (21%), Positives = 102/253 (40%)
Query: 237 LTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYS 296
L L + + L ++P F + L++L++ N L + S+ +D+ +
Sbjct: 196 LENLESIEFGSNKLRQMPRGIFGKMPKLKQLNLWSNQLHNLTKHDFEGATSVLGIDIHDN 255
Query: 297 NLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLEL--NNCGLTRLNETVF 354
++++ F +T++ + LS N +L GLF + HL+ + L N L L +F
Sbjct: 256 GIEQLPHDVFAHLTNVTDINLSANLFRSLPQGLFDHNKHLNEVRLMNNRVPLATLPSRLF 315
Query: 355 HENYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHENY 414
P+L+ LRL L LP ++S + + N +L L T+
Sbjct: 316 ANQ---PELQILRLRAE-LQSLPGDLFEHSTQITNISLGDN-----LLKTLPATLLEHQV 366
Query: 415 TYPDLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNL 474
+L L LS N L LP + + + ++F+N N+ +L +
Sbjct: 367 ---NLLSLDLSNNRLTHLP--DSLFAHTTNLTDLRLEDNLLTGISGDIFSNLGNLVTLVM 421
Query: 475 ANNNLSMTSELSF 487
+ N L +F
Sbjct: 422 SRNRLRTIDSRAF 434
Score = 117 (46.2 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 63/272 (23%), Positives = 116/272 (42%)
Query: 25 NANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVF 84
N P+ + + L + L + F + T + + L N L+ + +
Sbjct: 303 NRVPLATLPSRLFANQPELQILRLRAELQSLPGDLFEHSTQITNISLGDNLLKTLPATLL 362
Query: 85 DPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLD 144
+ +L L L+ LT++ S F + +L L L N L I + NLG L TL
Sbjct: 363 EHQVNLLSLDLSNNRLTHLPDSLFAHTTNLTDLRLEDNLLTG-ISGD-IFSNLGNLVTLV 420
Query: 145 LRQSGISNLPDNVFANNTWLRNLNLAENE------LIDLDVATTLGQ--NLVH-LDSLDL 195
+ ++ + + F + LR+L+L N+ L+D+ + T + +H L +L+L
Sbjct: 421 MSRNRLRTIDSRAFVSTNGLRHLHLDHNDIDLQQPLLDIMLQTQINSPFGYMHGLLTLNL 480
Query: 196 SNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLS-VALKPLTKLHRLSLRNCGLSR-- 252
N + + D +LR L LS N +S+ +A +LH +++ + + R
Sbjct: 481 RNNSIIF-VYNDWKNTMLQLRELDLSYNNISSLGYEDLAFLSQNRLH-VNMTHNKIRRIA 538
Query: 253 LPANTF--HRFTC-LQELDISHNPLIDAFTAL 281
LP + + L +D++ NPL+ T L
Sbjct: 539 LPEDVHLGEGYNNNLVHVDLNDNPLVCDCTIL 570
Score = 80 (33.2 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 24/70 (34%), Positives = 32/70 (45%)
Query: 468 NITSLNLANNNLSMTSELSFQFXXXXXXXXXXXXXXXXXTHISPTVLRH-NRAIT--SIK 524
++TSL+LA NNL+ S ++ TVL NR + S+K
Sbjct: 693 SVTSLHLAGNNLT-----SIDVDQLPTNLTHLDISWNHLQMLNATVLGFLNRTMKWRSVK 747
Query: 525 LVGNPWKCDC 534
L GNPW CDC
Sbjct: 748 LSGNPWMCDC 757
Score = 48 (22.0 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 516 HNRAITSIKLVGNPWKCDCNIADMW 540
+N + + L NP CDC I +W
Sbjct: 549 YNNNLVHVDLNDNPLVCDCTI--LW 571
Score = 42 (19.8 bits), Expect = 9.3e-12, Sum P(2) = 9.3e-12
Identities = 20/74 (27%), Positives = 28/74 (37%)
Query: 411 HENYTYPDLEELRLSGNPLHVLPTGNX---XXXXXXXXXXXXXXXCKIDYLPPNVFNNTR 467
H+N L EL L N L LP+ N +D LP N
Sbjct: 665 HKNM---QLMELHLENNTLLRLPSANTPGYESVTSLHLAGNNLTSIDVDQLPTN------ 715
Query: 468 NITSLNLANNNLSM 481
+T L+++ N+L M
Sbjct: 716 -LTHLDISWNHLQM 728
>ZFIN|ZDB-GENE-041111-75 [details] [associations]
symbol:lrig2 "leucine-rich repeats and
immunoglobulin-like domains 2" species:7955 "Danio rerio"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 ZFIN:ZDB-GENE-041111-75 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101816 EMBL:CR391948 IPI:IPI00901536
Ensembl:ENSDART00000112700 Uniprot:E7F013
Length = 1044
Score = 233 (87.1 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 87/364 (23%), Positives = 166/364 (45%)
Query: 14 LDNPGLIT-INLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLS 72
L+ P +T ++N N + V + ++ L + +S++ + ++L LDLS
Sbjct: 52 LEAPAWVTHASINQNELTAVPFLGDASSNITVLSLVHNRISEVVAEQLLPYSSLESLDLS 111
Query: 73 GNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTL 132
N + ++ G F P+ L+YL L++ ++ + P F N++ L L+++QN+L D
Sbjct: 112 SNSISELKAGSFPPM-QLKYLNLSKNKISSLEPGCFGNISSLLVLKINQNRLSLLPDKVF 170
Query: 133 VLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDS 192
L +L L+LR++ I + +F L++L + N + L G L +++
Sbjct: 171 TLS---QLQVLELRRNRIRVVESLIFKELKALKSLKMQRNGITKLMDGALFG--LENMEE 225
Query: 193 LDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSR 252
L+L +L L++ LR L ++ N + A + +L L L LSR
Sbjct: 226 LELEYNNLT-ELNKGWLYGLHMLRILRVNQNNIGLIRAD-AWEFCHRLEELDLSFNHLSR 283
Query: 253 LPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRS---TFLKM 309
L F + LQ L++ N + + S L ++ LD+ + + F+ +
Sbjct: 284 LEDWVFAGLSLLQSLNLGDNQISHLGEGVFSSLANVRTLDIRNNEISLAIEDFIGMFVGL 343
Query: 310 TSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLS 369
L +L+L NK+ T+ F+ L L L+L+ G+ ++ F T+ L+ L L+
Sbjct: 344 KRLNSLVLQNNKIRTITKRAFEGLMELENLDLSKNGIMSIHPDAF----THLKLKTLDLN 399
Query: 370 GNPL 373
+ L
Sbjct: 400 SSSL 403
Score = 165 (63.1 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 62/261 (23%), Positives = 114/261 (43%)
Query: 19 LITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRI 78
L+ + +N N + + L L ++ + + F L L L + N +
Sbjct: 152 LLVLKINQNRLSLLPDKVFTLSQLQVLELRRNRIRVVESLIFKELKALKSLKMQRNGITK 211
Query: 79 IEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKS-HID-WTLVLGN 136
+ G L ++E L L NLT ++ L+ L+ L ++QN + D W
Sbjct: 212 LMDGALFGLENMEELELEYNNLTELNKGWLYGLHMLRILRVNQNNIGLIRADAWEFC--- 268
Query: 137 LGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLS 196
+L+ LDL + +S L D VFA + L++LNL +N++ L +L ++ +LD+
Sbjct: 269 -HRLEELDLSFNHLSRLEDWVFAGLSLLQSLNLGDNQISHLGEGVF--SSLANVRTLDIR 325
Query: 197 NCHLKGPLSE--DAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLP 254
N + + + FV +L +L L N + A + L +L L L G+ +
Sbjct: 326 NNEISLAIEDFIGMFVGLKRLNSLVLQNNKIRTITKR-AFEGLMELENLDLSKNGIMSIH 384
Query: 255 ANTFHRFTCLQELDISHNPLI 275
+ F L+ LD++ + L+
Sbjct: 385 PDAFTHLK-LKTLDLNSSSLL 404
Score = 129 (50.5 bits), Expect = 0.00020, P = 0.00020
Identities = 64/273 (23%), Positives = 117/273 (42%)
Query: 212 ATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISH 271
++ + L L N +S ++ L P + L L L + +S L A +F L+ L++S
Sbjct: 78 SSNITVLSLVHNRISEV-VAEQLLPYSSLESLDLSSNSISELKAGSFPPMQ-LKYLNLSK 135
Query: 272 NPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQ 331
N + + SL L + + L + F ++ L+ L L N++ +ES +F+
Sbjct: 136 NKISSLEPGCFGNISSLLVLKINQNRLSLLPDKVFT-LSQLQVLELRRNRIRVVESLIFK 194
Query: 332 NLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQ 391
L L L++ G+T+L + + ++EEL L N L L + Y + + +
Sbjct: 195 ELKALKSLKMQRNGITKLMDGAL---FGLENMEELELEYNNLTEL-NKGWLYGLHML--R 248
Query: 392 IWKNFDFLVILFILNETVFHENYTYPDLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXX 451
I + + L + F LEEL LS N H+ +
Sbjct: 249 ILRVNQNNIGLIRADAWEFCHR-----LEELDLSFN--HLSRLEDWVFAGLSLLQSLNLG 301
Query: 452 XCKIDYLPPNVFNNTRNITSLNLANNNLSMTSE 484
+I +L VF++ N+ +L++ NN +S+ E
Sbjct: 302 DNQISHLGEGVFSSLANVRTLDIRNNEISLAIE 334
>FB|FBgn0000313 [details] [associations]
symbol:chp "chaoptic" species:7227 "Drosophila melanogaster"
[GO:0005886 "plasma membrane" evidence=NAS;IDA] [GO:0007156
"homophilic cell adhesion" evidence=NAS;IDA] [GO:0042051 "compound
eye photoreceptor development" evidence=NAS] [GO:0042052
"rhabdomere development" evidence=IGI] [GO:0016028 "rhabdomere"
evidence=IDA] Pfam:PF00560 InterPro:IPR000225 InterPro:IPR001611
PROSITE:PS51450 EMBL:AE014297 GO:GO:0005886 GO:GO:0007601
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0050896
GO:GO:0007156 GO:GO:0016028 HOGENOM:HOG000265621 GO:GO:0042052
GeneTree:ENSGT00700000104056 EMBL:M19017 EMBL:M19008 EMBL:M19009
EMBL:M19010 EMBL:M19011 EMBL:M19012 EMBL:M19013 EMBL:M19014
EMBL:M19016 EMBL:K03274 PIR:A29944 RefSeq:NP_524605.1
UniGene:Dm.21698 ProteinModelPortal:P12024 SMR:P12024 STRING:P12024
PaxDb:P12024 PRIDE:P12024 EnsemblMetazoa:FBtr0085778
EnsemblMetazoa:FBtr0330099 GeneID:43690 KEGG:dme:Dmel_CG1744
CTD:64152 FlyBase:FBgn0000313 InParanoid:P12024 OMA:LSHNDEL
OrthoDB:EOG4VQ844 PhylomeDB:P12024 ChiTaRS:CHP GenomeRNAi:43690
NextBio:835267 Bgee:P12024 GermOnline:CG1744 Uniprot:P12024
Length = 1315
Score = 249 (92.7 bits), Expect = 1.4e-15, Sum P(3) = 1.4e-15
Identities = 107/366 (29%), Positives = 168/366 (45%)
Query: 37 LVARSLLY-LYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLT-SLEYLM 94
+V +S ++ L+M+ L +I P +F T + +L +SGN L I F L SL L+
Sbjct: 75 MVNQSKVFMLHMENTGLREIEP-YFLQSTGMYRLKISGNHLTEIPDDAFTGLERSLWELI 133
Query: 95 LNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLP 154
L + +L I + +L L+ L+L N + +HI G L TL LR++ IS L
Sbjct: 134 LPQNDLVEIPSKSLRHLQKLRHLDLGYNHI-THIQHDSFRGLEDSLQTLILRENCISQLM 192
Query: 155 DNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATK 214
+ F+ L L+L+ N L ++D + L L L++ ++ + DA
Sbjct: 193 SHSFSGLLILETLDLSGNNLFEID-PNVFVDGMPRLTRLLLTD-NILSEIPYDALGPLKS 250
Query: 215 LRTLYLSGNPL--SAADLSVALKPLTKLH--RLSLRNCGLSRLPANTFHRFTCLQELDIS 270
LRTL +S N + + + + +K TKL+ L L + LP N+F F +
Sbjct: 251 LRTLDISHNVIWSLSGNETYEIKASTKLNLDNLHLEYNHIEVLPPNSFKYFDTVNRTFFD 310
Query: 271 HNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMT-SLKTLILSGNKLETLESGL 329
NP+ P + + M Y L IS F + SL+ L LSGN L L L
Sbjct: 311 GNPIHTLREDAFKPAR-IREIYMRYCGLTNISPVAFDSLVNSLQILDLSGNNLTKLHHKL 369
Query: 330 FQNLTHLSVLEL--NNCGLTRLNETVFHENYTYPDLEELRLSGN---P--LHVLPDSTKQ 382
F N L V+ + N + + ET +YT L +L LSG+ P L L + T+
Sbjct: 370 FNNFDVLRVISMRDNKIKIQKPTETFNAVHYT---LLKLDLSGDRNDPTNLQTLRNMTRM 426
Query: 383 YSMRTI 388
+MR++
Sbjct: 427 RNMRSL 432
Score = 240 (89.5 bits), Expect = 1.4e-14, Sum P(3) = 1.4e-14
Identities = 122/491 (24%), Positives = 208/491 (42%)
Query: 12 RNLDNPGLITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDL 71
R LD + +L+ N ++ + + +L L+++ + + P F T+N+
Sbjct: 252 RTLDISHNVIWSLSGNETYEIKASTKL--NLDNLHLEYNHIEVLPPNSFKYFDTVNRTFF 309
Query: 72 SGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNL-NHLKTLELSQNKL-KSHID 129
GNP+ + F P E M C LT ISP AFD+L N L+ L+LS N L K H
Sbjct: 310 DGNPIHTLREDAFKPARIREIYM-RYCGLTNISPVAFDSLVNSLQILDLSGNNLTKLHHK 368
Query: 130 WTLVLGNLGKLDTLDLRQSGIS-NLPDNVF-ANNTWLRNLNLA--ENELIDLDVATTLGQ 185
+ N L + +R + I P F A + L L+L+ N+ +L + +
Sbjct: 369 ---LFNNFDVLRVISMRDNKIKIQKPTETFNAVHYTLLKLDLSGDRNDPTNLQTLRNMTR 425
Query: 186 NLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSL 245
+ ++ SL +S ED +L L ++ LS S A K + L RL
Sbjct: 426 -MRNMRSLSISRLGSSSVGPEDFKDFGVELEDLQITRASLSGIQ-SHAFKHVRGLKRLDF 483
Query: 246 RNCGLSRLPANTFHRFT-CLQELDISHNPLIDAFTAL-LSPLESLEHLDMGYSNLQRISR 303
G+S + + FH L L +SH A A L L SL+ LD +++ +S
Sbjct: 484 SENGISSIENDAFHEIGHSLISLKMSHGYSGSALPAEPLRHLTSLQELDFSNNHISSMSD 543
Query: 304 STFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDL 363
++F + +L+ L L N++E + G FQ H + E++ R N +T+ DL
Sbjct: 544 TSFHFLKNLRLLELHDNRIEQVLKGTFQGDIHSKLEEIS----LRFNHLTSISQHTFFDL 599
Query: 364 EELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFH-ENYTYPDLEEL 422
E LR LH+ D K + I + + N D L L + + + + ++ +L +L
Sbjct: 600 EALR----KLHL--DDNK---IDKIERRAFMNLDELEYLSLRGNKINNLADESFQNLPKL 650
Query: 423 RLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNT------------RNIT 470
+ + LP N + + ++N++ NI
Sbjct: 651 EILDMAFNQLPNFNFDYFDQVGTLSNLNVNVSHNQIRQLMYNSSWSGRNEHGGMYHSNIK 710
Query: 471 SLNLANNNLSM 481
L+L++NN+S+
Sbjct: 711 ILDLSHNNISI 721
Score = 229 (85.7 bits), Expect = 2.1e-13, Sum P(3) = 2.1e-13
Identities = 90/314 (28%), Positives = 146/314 (46%)
Query: 69 LDLSGNPLRIIEPGVFDPLT-SLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSH 127
LDLS N + II PG F P SL +L L +L + F N+ HL+ L+LS N +
Sbjct: 712 LDLSHNNISIIHPGYFRPAEISLTHLHLGYNSLMNTTRDVFGNMPHLQWLDLSYNWIHE- 770
Query: 128 IDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNL 187
+D+ N +L + + +S++P ++F LR ++ + N L L L N
Sbjct: 771 LDFD-AFKNTKQLQLVFFGHNYLSDIPQDIFKPVQGLRIVDFSHNHLRGLP--DNLFYN- 826
Query: 188 VHLDSLDLS-NCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLR 246
++ LD+S N LK P S + + A L L+LS N +S L L +
Sbjct: 827 GGMEKLDVSHNMMLKIPSSSLSSLAALTLCELHLSNNFISTIHSMDLSNKFRSLRYLDIS 886
Query: 247 NCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTF 306
L R+ F L LD+SHN + LE+ + +G N+ +S
Sbjct: 887 YNYLLRIDDAVFATMPKLAVLDLSHNRDLKVMDKSFMGLEN-SLIKLGLENIS-LSTVPE 944
Query: 307 LKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEEL 366
+++ L+ L N+L ++ L N+++L +L+L+N LT N + + P L L
Sbjct: 945 IRLKYLREFRLGYNELPSIPQELAHNMSNLRMLDLSNNDLT--NVPLMTQ--ALPHLRRL 1000
Query: 367 RLSGNPLHVLPDST 380
LSGNP+ L +++
Sbjct: 1001 MLSGNPITSLNNNS 1014
Score = 222 (83.2 bits), Expect = 1.2e-12, Sum P(3) = 1.2e-12
Identities = 116/430 (26%), Positives = 195/430 (45%)
Query: 15 DNPGLITINLNANPIQPVEG-AFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSG 73
D L ++L+ N I +E AF+ L YL ++ ++ + + F NL L LD++
Sbjct: 598 DLEALRKLHLDDNKIDKIERRAFMNLDELEYLSLRGNKINNLADESFQNLPKLEILDMAF 657
Query: 74 NPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLV 133
N L FD + +L L +N +S N ++ L + + + +
Sbjct: 658 NQLPNFNFDYFDQVGTLSNLNVN------VSH------NQIRQLMYNSSWSGRNEHGGMY 705
Query: 134 LGNLGKLDTLDLRQSGISNLPDNVFAN-NTWLRNLNLAENELIDLDVATTLGQNLVHLDS 192
N+ K+ LDL + IS + F L +L+L N L++ G N+ HL
Sbjct: 706 HSNI-KI--LDLSHNNISIIHPGYFRPAEISLTHLHLGYNSLMNT-TRDVFG-NMPHLQW 760
Query: 193 LDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSR 252
LDLS + L DAF N +L+ ++ N LS + KP+ L + + L
Sbjct: 761 LDLSYNWIH-ELDFDAFKNTKQLQLVFFGHNYLSDIPQDI-FKPVQGLRIVDFSHNHLRG 818
Query: 253 LPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSN--LQRI-SRSTFLKM 309
LP N F+ +++LD+SHN ++ ++ LS L +L ++ SN + I S K
Sbjct: 819 LPDNLFYNGG-MEKLDVSHNMMLKIPSSSLSSLAALTLCELHLSNNFISTIHSMDLSNKF 877
Query: 310 TSLKTLILSGNKLETLESGLFQNLTHLSVLELN-NCGLTRLNETVFH-ENYTYP-DLEEL 366
SL+ L +S N L ++ +F + L+VL+L+ N L ++++ EN LE +
Sbjct: 878 RSLRYLDISYNYLLRIDDAVFATMPKLAVLDLSHNRDLKVMDKSFMGLENSLIKLGLENI 937
Query: 367 RLSGNP---LHVLPDSTKQYS-MRTIPTQIWKNFDFLVILFILNETVFHE---NYTYPDL 419
LS P L L + Y+ + +IP ++ N L +L + N + + P L
Sbjct: 938 SLSTVPEIRLKYLREFRLGYNELPSIPQELAHNMSNLRMLDLSNNDLTNVPLMTQALPHL 997
Query: 420 EELRLSGNPL 429
L LSGNP+
Sbjct: 998 RRLMLSGNPI 1007
Score = 218 (81.8 bits), Expect = 3.3e-12, Sum P(3) = 3.3e-12
Identities = 106/447 (23%), Positives = 197/447 (44%)
Query: 2 WQGHPVYNDRRNLDNPGLIT-INLN---ANPIQPVEGAFLVARSLLYLYMQECTLSKINP 57
+ G+P++ R + P I I + I PV LV SL L + L+K++
Sbjct: 309 FDGNPIHTLREDAFKPARIREIYMRYCGLTNISPVAFDSLV-NSLQILDLSGNNLTKLHH 367
Query: 58 QFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLT--YISPSAFDNLNHLK 115
+ F N L + + N ++I +P + ++ Y +L + +L+ P+ L ++
Sbjct: 368 KLFNNFDVLRVISMRDNKIKIQKPT--ETFNAVHYTLL-KLDLSGDRNDPTNLQTLRNMT 424
Query: 116 TLE----LSQNKLKSHIDWTLVLGNLG-KLDTLDLRQSGISNLPDNVFANNTWLRNLNLA 170
+ LS ++L S + G +L+ L + ++ +S + + F + L+ L+ +
Sbjct: 425 RMRNMRSLSISRLGSSSVGPEDFKDFGVELEDLQITRASLSGIQSHAFKHVRGLKRLDFS 484
Query: 171 ENEL--IDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSA- 227
EN + I+ D +G +L+ SL +S+ + L + + T L+ L S N +S+
Sbjct: 485 ENGISSIENDAFHEIGHSLI---SLKMSHGYSGSALPAEPLRHLTSLQELDFSNNHISSM 541
Query: 228 ADLSVALKPLTKLHRLSLRNCGLSRLPANTFHR--FTCLQELDISHNPLIDAFTALLSPL 285
+D S L L L L + + ++ TF + L+E+ + N L L
Sbjct: 542 SDTSFHF--LKNLRLLELHDNRIEQVLKGTFQGDIHSKLEEISLRFNHLTSISQHTFFDL 599
Query: 286 ESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCG 345
E+L L + + + +I R F+ + L+ L L GNK+ L FQNL L +L++
Sbjct: 600 EALRKLHLDDNKIDKIERRAFMNLDELEYLSLRGNKINNLADESFQNLPKLEILDMAFNQ 659
Query: 346 LTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFIL 405
L N F + T +L + +S N + L ++ +S R ++ + ++ L
Sbjct: 660 LPNFNFDYFDQVGTLSNLN-VNVSHNQIRQLMYNSS-WSGRNEHGGMYHSNIKILDLSHN 717
Query: 406 NETVFHENYTYP---DLEELRLSGNPL 429
N ++ H Y P L L L N L
Sbjct: 718 NISIIHPGYFRPAEISLTHLHLGYNSL 744
Score = 202 (76.2 bits), Expect = 1.7e-10, Sum P(3) = 1.7e-10
Identities = 91/362 (25%), Positives = 168/362 (46%)
Query: 35 AFLVARSLLYLYMQECTLSKINPQFFTNLT-TLNKLDLS-GNPLRIIEPGVFDPLTSLEY 92
AF R L L E +S I F + +L L +S G + LTSL+
Sbjct: 471 AFKHVRGLKRLDFSENGISSIENDAFHEIGHSLISLKMSHGYSGSALPAEPLRHLTSLQE 530
Query: 93 LMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNL-GKLDTLDLRQSGIS 151
L + +++ +S ++F L +L+ LEL N+++ + T G++ KL+ + LR + ++
Sbjct: 531 LDFSNNHISSMSDTSFHFLKNLRLLELHDNRIEQVLKGTFQ-GDIHSKLEEISLRFNHLT 589
Query: 152 NLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVN 211
++ + F + LR L+L +N++ ++ + NL L+ L L + L++++F N
Sbjct: 590 SISQHTFFDLEALRKLHLDDNKIDKIERRAFM--NLDELEYLSLRGNKINN-LADESFQN 646
Query: 212 ATKLRTLYLSGNPL------------SAADLSVALKPLTKLHRLSLRNCGLSRLP-ANTF 258
KL L ++ N L + ++L+V + ++ +L + R +
Sbjct: 647 LPKLEILDMAFNQLPNFNFDYFDQVGTLSNLNVNVSH-NQIRQLMYNSSWSGRNEHGGMY 705
Query: 259 HRFTCLQELDISHNPLIDAFTALLSPLE-SLEHLDMGYSNLQRISRSTFLKMTSLKTLIL 317
H + ++ LD+SHN + P E SL HL +GY++L +R F M L+ L L
Sbjct: 706 H--SNIKILDLSHNNISIIHPGYFRPAEISLTHLHLGYNSLMNTTRDVFGNMPHLQWLDL 763
Query: 318 SGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLP 377
S N + L+ F+N L ++ + L+ + + +F L + S N L LP
Sbjct: 764 SYNWIHELDFDAFKNTKQLQLVFFGHNYLSDIPQDIFKP---VQGLRIVDFSHNHLRGLP 820
Query: 378 DS 379
D+
Sbjct: 821 DN 822
Score = 184 (69.8 bits), Expect = 1.4e-08, Sum P(3) = 1.4e-08
Identities = 94/373 (25%), Positives = 159/373 (42%)
Query: 2 WQGHPVYNDRRNLDNPGLITINLNANPIQPVE-GAFLVAR-SLLYLYMQECTLSKINPQF 59
W G N+ + + + ++L+ N I + G F A SL +L++ +L
Sbjct: 695 WSGR---NEHGGMYHSNIKILDLSHNNISIIHPGYFRPAEISLTHLHLGYNSLMNTTRDV 751
Query: 60 FTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLEL 119
F N+ L LDLS N + ++ F L+ + L+ I F + L+ ++
Sbjct: 752 FGNMPHLQWLDLSYNWIHELDFDAFKNTKQLQLVFFGHNYLSDIPQDIFKPVQGLRIVDF 811
Query: 120 SQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDV 179
S N L+ D G + KLD I + + A T L L+L+ N + +
Sbjct: 812 SHNHLRGLPDNLFYNGGMEKLDVSHNMMLKIPSSSLSSLAALT-LCELHLSNNFISTIH- 869
Query: 180 ATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGN-PLSAADLS-VALKPL 237
+ L L LD+S +L + + F KL L LS N L D S + L+
Sbjct: 870 SMDLSNKFRSLRYLDISYNYLLR-IDDAVFATMPKLAVLDLSHNRDLKVMDKSFMGLE-- 926
Query: 238 TKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSN 297
L +L L N LS +P R L+E + +N L L + +L LD+ ++
Sbjct: 927 NSLIKLGLENISLSTVPEI---RLKYLREFRLGYNELPSIPQELAHNMSNLRMLDLSNND 983
Query: 298 LQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTH-LSVLELNNCGLTRLNETVFHE 356
L + T + L+ L+LSGN + +L + F + L +L+++N RL+ +
Sbjct: 984 LTNVPLMT-QALPHLRRLMLSGNPITSLNNNSFDGVNEDLEMLDISNF---RLHYFEYGC 1039
Query: 357 NYTYPDLEELRLS 369
+ P L L+L+
Sbjct: 1040 LDSLPHLRSLKLT 1052
Score = 180 (68.4 bits), Expect = 3.7e-08, Sum P(3) = 3.7e-08
Identities = 75/249 (30%), Positives = 115/249 (46%)
Query: 192 SLDLSNCHLKG-PLSE-DAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCG 249
S DL H K P VN +K+ L++ L ++ T ++RL +
Sbjct: 56 STDLGIVHCKNVPFPALPRMVNQSKVFMLHMENTGLR--EIEPYFLQSTGMYRLKISGNH 113
Query: 250 LSRLPANTFHRFT-CLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLK 308
L+ +P + F L EL + N L++ + L L+ L HLD+GY+++ I +F
Sbjct: 114 LTEIPDDAFTGLERSLWELILPQNDLVEIPSKSLRHLQKLRHLDLGYNHITHIQHDSFRG 173
Query: 309 MT-SLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELR 367
+ SL+TLIL N + L S F L L L+L+ L ++ VF + P L L
Sbjct: 174 LEDSLQTLILRENCISQLMSHSFSGLLILETLDLSGNNLFEIDPNVFVDGM--PRLTRLL 231
Query: 368 LSGNPLHVLP-DSTKQY-SMRTIPTQIWKNFDFLVILFIL-NETVFHENYTYPDLEELRL 424
L+ N L +P D+ S+RT+ I N VI + NET + T +L+ L L
Sbjct: 232 LTDNILSEIPYDALGPLKSLRTL--DISHN----VIWSLSGNETYEIKASTKLNLDNLHL 285
Query: 425 SGNPLHVLP 433
N + VLP
Sbjct: 286 EYNHIEVLP 294
Score = 177 (67.4 bits), Expect = 7.7e-08, Sum P(3) = 7.7e-08
Identities = 83/329 (25%), Positives = 144/329 (43%)
Query: 41 SLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVF-DPLTSLEYLMLNRCN 99
SL L ++E +S++ F+ L L LDLSGN L I+P VF D + L L+L
Sbjct: 177 SLQTLILRENCISQLMSHSFSGLLILETLDLSGNNLFEIDPNVFVDGMPRLTRLLLTDNI 236
Query: 100 LTYISPSAFDNLNHLKTLELSQN---KLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDN 156
L+ I A L L+TL++S N L + + + LD L L + I LP N
Sbjct: 237 LSEIPYDALGPLKSLRTLDISHNVIWSLSGNETYEIKASTKLNLDNLHLEYNHIEVLPPN 296
Query: 157 VFANNTWLRNLNLAENELIDL--DVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATK 214
F + N + L D +++ L+N P++ D+ VN+
Sbjct: 297 SFKYFDTVNRTFFDGNPIHTLREDAFKPARIREIYMRYCGLTNI---SPVAFDSLVNS-- 351
Query: 215 LRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLS-RLPANTFH--RFTCLQELDIS- 270
L+ L LSGN L+ + L +S+R+ + + P TF+ +T L+ LD+S
Sbjct: 352 LQILDLSGNNLTKLHHKL-FNNFDVLRVISMRDNKIKIQKPTETFNAVHYTLLK-LDLSG 409
Query: 271 --HNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKM-TSLKTLILSGNKLETLES 327
++P ++ + ++ L + + F L+ L ++ L ++S
Sbjct: 410 DRNDPTNLQTLRNMTRMRNMRSLSISRLGSSSVGPEDFKDFGVELEDLQITRASLSGIQS 469
Query: 328 GLFQNLTHLSVLELNNCGLTRLNETVFHE 356
F+++ L L+ + G++ + FHE
Sbjct: 470 HAFKHVRGLKRLDFSENGISSIENDAFHE 498
Score = 140 (54.3 bits), Expect = 0.00056, Sum P(3) = 0.00056
Identities = 99/428 (23%), Positives = 178/428 (41%)
Query: 66 LNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLK 125
L ++ L N L I F L +L L L+ + I AF NL+ L+ L L NK+
Sbjct: 578 LEEISLRFNHLTSISQHTFFDLEALRKLHLDDNKIDKIERRAFMNLDELEYLSLRGNKIN 637
Query: 126 SHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNL--AENELIDLDVATTL 183
+ D + NL KL+ LD+ + + N + F L NLN+ + N++ L ++
Sbjct: 638 NLADESFQ--NLPKLEILDMAFNQLPNFNFDYFDQVGTLSNLNVNVSHNQIRQLMYNSSW 695
Query: 184 -GQN----LVH--LDSLDLSNCHLKGPLSEDAFVNAT-KLRTLYLSGNPLSAADLSVALK 235
G+N + H + LDLS+ ++ + F A L L+L N L V
Sbjct: 696 SGRNEHGGMYHSNIKILDLSHNNIS-IIHPGYFRPAEISLTHLHLGYNSLMNTTRDV-FG 753
Query: 236 PLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGY 295
+ L L L + L + F LQ + HN L D + P++ L +D +
Sbjct: 754 NMPHLQWLDLSYNWIHELDFDAFKNTKQLQLVFFGHNYLSDIPQDIFKPVQGLRIVDFSH 813
Query: 296 SNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELN--NCGLTRLNETV 353
++L+ + + F ++ L +S N + + S +L L++ EL+ N ++ ++
Sbjct: 814 NHLRGLPDNLFYN-GGMEKLDVSHNMMLKIPSSSLSSLAALTLCELHLSNNFISTIHSMD 872
Query: 354 FHENYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFH-E 412
+ L L +S N L + D+ + + N D L +++++ E
Sbjct: 873 LSNKFR--SLRYLDISYNYLLRIDDAVFATMPKLAVLDLSHNRD----LKVMDKSFMGLE 926
Query: 413 NYTYPDLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSL 472
N L +L L L +P ++ +P + +N N+ L
Sbjct: 927 N----SLIKLGLENISLSTVPEIRLKYLREFRLGYN-----ELPSIPQELAHNMSNLRML 977
Query: 473 NLANNNLS 480
+L+NN+L+
Sbjct: 978 DLSNNDLT 985
Score = 42 (19.8 bits), Expect = 1.4e-15, Sum P(3) = 1.4e-15
Identities = 7/29 (24%), Positives = 15/29 (51%)
Query: 520 ITSIKLVGNPWKCDCNIA--DMWEWATRE 546
+T +K+ CDC++ + W+ R+
Sbjct: 1203 LTDLKMSHTDLNCDCDLGWVEFWQRKRRQ 1231
Score = 38 (18.4 bits), Expect = 1.4e-15, Sum P(3) = 1.4e-15
Identities = 11/26 (42%), Positives = 13/26 (50%)
Query: 458 LPPNVFN---NTRNIT-SLNLANNNL 479
LPPN F RNI+ + N NL
Sbjct: 1158 LPPNFFKYMGRVRNISLDIRYHNRNL 1183
>UNIPROTKB|F1NF14 [details] [associations]
symbol:SLIT3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0009887 "organ
morphogenesis" evidence=IEA] [GO:0010629 "negative regulation of
gene expression" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0032870 "cellular response to
hormone stimulus" evidence=IEA] [GO:0035385 "Roundabout signaling
pathway" evidence=IEA] [GO:0048495 "Roundabout binding"
evidence=IEA] [GO:0048846 "axon extension involved in axon
guidance" evidence=IEA] [GO:0050919 "negative chemotaxis"
evidence=IEA] [GO:0051414 "response to cortisol stimulus"
evidence=IEA] [GO:0061364 "apoptotic process involved in
luteolysis" evidence=IEA] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0008285 GO:GO:0005615 GO:GO:0030308 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 GO:GO:0032870 GO:GO:0010629 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0070100
Pfam:PF12661 Pfam:PF01463 GO:GO:0051414
GeneTree:ENSGT00700000104083 GO:GO:0050919 GO:GO:0035385
OMA:SVDCHGL EMBL:AADN02035923 IPI:IPI00587174
Ensembl:ENSGALT00000002967 ArrayExpress:F1NF14 Uniprot:F1NF14
Length = 1338
Score = 191 (72.3 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 89/318 (27%), Positives = 133/318 (41%)
Query: 60 FTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLEL 119
F L L K++LS N ++ I G FD + ++ L+L L + F L LKTL L
Sbjct: 367 FKKLPNLRKINLSNNKIKEIREGTFDGASGVQELILTENQLESVHGRMFRGLTGLKTLML 426
Query: 120 SQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENEL-IDLD 178
N + S I+ G L + L L + IS + F+ L +NL N +
Sbjct: 427 RSNSI-SCINNDTFAG-LSSVRLLSLYDNHISTITPGAFSTLVSLSTINLLANSFNCNCH 484
Query: 179 VATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLT 238
+A LG+ L + + LK +D + + GN S+ LS
Sbjct: 485 LAW-LGKWLRKKRIVSGNPRCLKPFFLKDIPIQDVDAQDFTCEGNDESSCLLSPPCPSQC 543
Query: 239 KLHRLSLR--NCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYS 296
+R N GL +P T EL + N L A LS L +D+ +
Sbjct: 544 TCVDSVVRCSNKGLRVMPKGIPKDVT---ELYLEGNHLT-AVPKGLSAFRHLTLIDLSNN 599
Query: 297 NLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHE 356
++ ++ TF MT L TLILS N+L + F L L VL L+ ++ + E F++
Sbjct: 600 SISVLANYTFSNMTQLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFND 659
Query: 357 NYTYPDLEELRLSGNPLH 374
+ L L L NPLH
Sbjct: 660 LVS---LSHLALGTNPLH 674
Score = 167 (63.8 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 83/314 (26%), Positives = 127/314 (40%)
Query: 17 PGLITINLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNP 75
P L INL+ N I+ + EG F A + L + E L ++ + F LT L L L N
Sbjct: 371 PNLRKINLSNNKIKEIREGTFDGASGVQELILTENQLESVHGRMFRGLTGLKTLMLRSNS 430
Query: 76 LRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKS--HIDWTLV 133
+ I F L+S+ L L +++ I+P AF L L T+ L N H+ W
Sbjct: 431 ISCINNDTFAGLSSVRLLSLYDNHISTITPGAFSTLVSLSTINLLANSFNCNCHLAW--- 487
Query: 134 LGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTL-----GQNLV 188
LGK SG F + +++++ + D ++ L
Sbjct: 488 ---LGKWLRKKRIVSGNPRCLKPFFLKDIPIQDVDAQDFTCEGNDESSCLLSPPCPSQCT 544
Query: 189 HLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNC 248
+DS+ C KG + + LYL GN L+A + L L + L N
Sbjct: 545 CVDSV--VRCSNKGLRVMPKGI-PKDVTELYLEGNHLTA--VPKGLSAFRHLTLIDLSNN 599
Query: 249 GLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLK 308
+S L TF T L L +S+N L + L SL L + +++ + +F
Sbjct: 600 SISVLANYTFSNMTQLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFND 659
Query: 309 MTSLKTLILSGNKL 322
+ SL L L N L
Sbjct: 660 LVSLSHLALGTNPL 673
Score = 144 (55.7 bits), Expect = 1.6e-15, Sum P(3) = 1.6e-15
Identities = 44/128 (34%), Positives = 66/128 (51%)
Query: 22 INLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIE 80
I L N I+ + GAF + L + + + +S+I P F L +L L L GN + I
Sbjct: 126 IRLEQNLIKVIPPGAFTQYKKLKRIDISKNQISEIAPDAFKGLKSLISLVLYGNKITEIP 185
Query: 81 PGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKL 140
G+FD L SL+ L+LN + + + F L++LK L L NKL++ I L L +
Sbjct: 186 QGLFDDLVSLQLLLLNANKINCLRVNTFQGLHNLKLLSLYDNKLQT-ISKGL-FAPLRSI 243
Query: 141 DTLDLRQS 148
TL L Q+
Sbjct: 244 QTLHLAQN 251
Score = 130 (50.8 bits), Expect = 8.3e-06, Sum P(2) = 8.3e-06
Identities = 79/324 (24%), Positives = 138/324 (42%)
Query: 68 KLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSH 127
++ L N +++I PG F L+ + +++ ++ I+P AF L L +L L NK+ +
Sbjct: 125 EIRLEQNLIKVIPPGAFTQYKKLKRIDISKNQISEIAPDAFKGLKSLISLVLYGNKI-TE 183
Query: 128 IDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLD---VATTLG 184
I L +L L L L + I+ L N F L+ L+L +N+L + A
Sbjct: 184 IPQGL-FDDLVSLQLLLLNANKINCLRVNTFQGLHNLKLLSLYDNKLQTISKGLFAPLRS 242
Query: 185 QNLVHL-DSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRL 243
+HL + + +CHLK L++ N + S NP A+ ++ + +K R
Sbjct: 243 IQTLHLAQNPFVCDCHLKW-LADYLQDNPIETSGARCS-NPRRLANKRIS-QIKSKKFRC 299
Query: 244 SLRNCGLSRLPANTFHRFTCLQE-------LDISHNPLIDAFTALLSPLESLEHLDMGYS 296
S S+ F C ++ +D S+ L + L L D S
Sbjct: 300 SGSEDYRSKFTGKCFMDLVCPEKCRCEGTVVDCSNQKLTRLPSHLPEYTTDLRLNDNDIS 359
Query: 297 NLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHE 356
L+ I F K+ +L+ + LS NK++ + G F + + L L L ++ +F
Sbjct: 360 VLEAIG--LFKKLPNLRKINLSNNKIKEIREGTFDGASGVQELILTENQLESVHGRMFR- 416
Query: 357 NYTYPDLEELRLSGNPLHVLPDST 380
T L+ L L N + + + T
Sbjct: 417 GLT--GLKTLMLRSNSISCINNDT 438
Score = 127 (49.8 bits), Expect = 1.6e-15, Sum P(3) = 1.6e-15
Identities = 44/175 (25%), Positives = 77/175 (44%)
Query: 218 LYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDA 277
L L+ N +S + K L L +++L N + + TF + +QEL ++ N L
Sbjct: 351 LRLNDNDISVLEAIGLFKKLPNLRKINLSNNKIKEIREGTFDGASGVQELILTENQLESV 410
Query: 278 FTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLS 337
+ L L+ L + +++ I+ TF ++S++ L L N + T+ G F L LS
Sbjct: 411 HGRMFRGLTGLKTLMLRSNSISCINNDTFAGLSSVRLLSLYDNHISTITPGAFSTLVSLS 470
Query: 338 VLELNNCGLTRLNETVFHENYTYPDLEELRL-SGNPLHVLPDSTKQYSMRTIPTQ 391
+ L L H + L + R+ SGNP + P K ++ + Q
Sbjct: 471 TINL----LANSFNCNCHLAWLGKWLRKKRIVSGNPRCLKPFFLKDIPIQDVDAQ 521
Score = 113 (44.8 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 61/257 (23%), Positives = 103/257 (40%)
Query: 95 LNRCNLTYISPSAFDNLNHLKTLELSQNKLKS--HI----DWTLVLGNLGK----LDTLD 144
LN N+T I ++F+++ ++TL L N L H+ DW +G+ L +
Sbjct: 2 LNNNNITRIPVTSFNHMPKIRTLRLHSNFLHCDCHLAWLSDWLRQRRTIGQFTFCLAPVS 61
Query: 145 LRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPL 204
LR ++ + F + I A T N+V L+ + L
Sbjct: 62 LRGFLVAEVQKKDFVCSGSQSEPPSCSASSITCPSACTCSNNVVDCRGRGLTE--IPANL 119
Query: 205 SEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCL 264
ED + ++R L N + A KL R+ + +S + + F L
Sbjct: 120 PEDIW----EIR---LEQNLIKVIPPG-AFTQYKKLKRIDISKNQISEIAPDAFKGLKSL 171
Query: 265 QELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLET 324
L + N + + L L SL+ L + + + + +TF + +LK L L NKL+T
Sbjct: 172 ISLVLYGNKITEIPQGLFDDLVSLQLLLLNANKINCLRVNTFQGLHNLKLLSLYDNKLQT 231
Query: 325 LESGLFQNLTHLSVLEL 341
+ GLF L + L L
Sbjct: 232 ISKGLFAPLRSIQTLHL 248
Score = 73 (30.8 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 43/139 (30%), Positives = 59/139 (42%)
Query: 140 LDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCH 199
L +DL + IS L + F+N T L L L+ N L + V G L L L L
Sbjct: 591 LTLIDLSNNSISVLANYTFSNMTQLSTLILSYNRLRCIPVHAFNG--LRSLRVLTLHGND 648
Query: 200 LKGPLSEDAFVNATKLRTLYLSGNPL----SAADLSVALKPLTK---LHRLSLRNCGLSR 252
+ + E +F + L L L NPL + LS +K K + R S + R
Sbjct: 649 ISS-VPEGSFNDLVSLSHLALGTNPLHCDCNLRWLSEWVKAGYKEPGIARCSGPEAMVDR 707
Query: 253 LPANT-FHRFTCLQELDIS 270
L T H F C + +DIS
Sbjct: 708 LLLTTPTHHFQCKEPVDIS 726
Score = 69 (29.3 bits), Expect = 8.4e-08, Sum P(2) = 8.4e-08
Identities = 21/131 (16%), Positives = 54/131 (41%)
Query: 417 PDLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLAN 476
P+L ++ LS N + + G +++ + +F + +L L +
Sbjct: 371 PNLRKINLSNNKIKEIREGTFDGASGVQELILTEN--QLESVHGRMFRGLTGLKTLMLRS 428
Query: 477 NNLSMTSELSFQFXXXXXXXXXXXXXXXXXTHISPTVLRHNRAITSIKLVGNPWKCDCNI 536
N++S + +F + I+P ++++I L+ N + C+C++
Sbjct: 429 NSISCINNDTF---AGLSSVRLLSLYDNHISTITPGAFSTLVSLSTINLLANSFNCNCHL 485
Query: 537 ADMWEWATREK 547
A + +W +++
Sbjct: 486 AWLGKWLRKKR 496
Score = 64 (27.6 bits), Expect = 1.6e-15, Sum P(3) = 1.6e-15
Identities = 29/125 (23%), Positives = 43/125 (34%)
Query: 418 DLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANN 477
D+ EL L GN L +P G I L F+N +++L L+ N
Sbjct: 567 DVTELYLEGNHLTAVPKGLSAFRHLTLIDLSNNS---ISVLANYTFSNMTQLSTLILSYN 623
Query: 478 NLSMTSELSFQFXXXXXXXXXXXXXXXXXTHISPTVLRHNRAITSIKLVGNPWKCDCNIA 537
L +F S L +++ + L NP CDCN+
Sbjct: 624 RLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLV---SLSHLALGTNPLHCDCNLR 680
Query: 538 DMWEW 542
+ EW
Sbjct: 681 WLSEW 685
Score = 48 (22.0 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 16/53 (30%), Positives = 24/53 (45%)
Query: 24 LNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNP 75
LNAN I + F +L L + + L I+ F L ++ L L+ NP
Sbjct: 200 LNANKINCLRVNTFQGLHNLKLLSLYDNKLQTISKGLFAPLRSIQTLHLAQNP 252
Score = 46 (21.3 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 30/122 (24%), Positives = 47/122 (38%)
Query: 362 DLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETV-FHENYTYPDLE 420
D+ EL L GN L +P K S F L ++ + N ++ NYT+ ++
Sbjct: 567 DVTELYLEGNHLTAVP---KGLSA----------FRHLTLIDLSNNSISVLANYTFSNMT 613
Query: 421 ELR---LSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANN 477
+L LS N L +P I +P FN+ +++ L L N
Sbjct: 614 QLSTLILSYNRLRCIPV--HAFNGLRSLRVLTLHGNDISSVPEGSFNDLVSLSHLALGTN 671
Query: 478 NL 479
L
Sbjct: 672 PL 673
Score = 42 (19.8 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 462 VFNNTRNITSLNLANNNLSMTSELSF 487
+F N+ +NL+NN + E +F
Sbjct: 366 LFKKLPNLRKINLSNNKIKEIREGTF 391
>ZFIN|ZDB-GENE-061026-3 [details] [associations]
symbol:nyx "nyctalopin" species:7955 "Danio rerio"
[GO:0007634 "optokinetic behavior" evidence=IMP] [GO:0007601
"visual perception" evidence=IMP] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 ZFIN:ZDB-GENE-061026-3 GO:GO:0007601 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR000372 SMART:SM00013 GO:GO:0007634 CTD:60506
HOGENOM:HOG000230477 HOVERGEN:HBG031762 KO:K08129 OMA:NISFITP
OrthoDB:EOG43JC4W GeneTree:ENSGT00690000101803 EMBL:BX545856
EMBL:BC163107 EMBL:BC163110 EMBL:DQ201193 IPI:IPI00508128
RefSeq:NP_001071085.1 UniGene:Dr.82636 Ensembl:ENSDART00000088569
GeneID:568821 KEGG:dre:568821 InParanoid:Q00P20 NextBio:20889357
Uniprot:Q00P20
Length = 469
Score = 224 (83.9 bits), Expect = 2.4e-15, P = 2.4e-15
Identities = 75/275 (27%), Positives = 127/275 (46%)
Query: 67 NKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKS 126
+ ++L N L+ + F L SL+ L L N+++I+P AF L +L L+++ N+
Sbjct: 61 SSINLDKNSLKFLSERAFGTLPSLKTLSLKYNNISFITPGAFKGLPNLVELKMAHNEYIR 120
Query: 127 HIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQN 186
++ T L +L LDL + N+PD +F L+ L +N + A +N
Sbjct: 121 YLH-TRTFTALKRLVRLDLSDCNLFNMPDRIFLEQITLKELLCFQNNFRRVPGALRGMEN 179
Query: 187 LVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLR 246
L H+ L+ + ++ ++ + T L+ L L N ++ A K L +L L
Sbjct: 180 LTHV-YLERNKIEA---VAYNSLLGLTSLKYLNLQENRINVIH-DEAFKDLIRLENFYLN 234
Query: 247 NCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTF 306
+ L LP F + L+ L++ N L + S L LE L + + L I +F
Sbjct: 235 DNLLVDLPQQAFKGLSNLKMLNLGGNLLTNVSKTWFSDLVELEVLYLDRNRLSYIEDGSF 294
Query: 307 LKMTSLKTLILSGNKLETLESGLFQNLTHLSVLEL 341
+TSL TL L+ N L +L +FQ + + L L
Sbjct: 295 ENLTSLITLHLNSNNLTSLPFSVFQPIYFIGRLYL 329
Score = 190 (71.9 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 96/340 (28%), Positives = 149/340 (43%)
Query: 95 LNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSG-ISNL 153
L++ +L ++S AF L LKTL L N + S I G L L L + + I L
Sbjct: 65 LDKNSLKFLSERAFGTLPSLKTLSLKYNNI-SFITPGAFKG-LPNLVELKMAHNEYIRYL 122
Query: 154 PDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNAT 213
F L L+L++ L ++ L Q + + L N + P + N T
Sbjct: 123 HTRTFTALKRLVRLDLSDCNLFNMPDRIFLEQ-ITLKELLCFQNNFRRVPGALRGMENLT 181
Query: 214 KLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNP 273
+ YL N + A + +L LT L L+L+ ++ + F L+ ++ N
Sbjct: 182 HV---YLERNKIEAVAYN-SLLGLTSLKYLNLQENRINVIHDEAFKDLIRLENFYLNDNL 237
Query: 274 LIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNL 333
L+D L +L+ L++G + L +S++ F + L+ L L N+L +E G F+NL
Sbjct: 238 LVDLPQQAFKGLSNLKMLNLGGNLLTNVSKTWFSDLVELEVLYLDRNRLSYIEDGSFENL 297
Query: 334 THLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNP------LHVLPDSTKQYSM-R 386
T L L LN+ LT L +VF Y + L L NP L L + + Y + R
Sbjct: 298 TSLITLHLNSNNLTSLPFSVFQPIYF---IGRLYLFRNPWECTCDLEWLREWMESYKLVR 354
Query: 387 TIPTQIWKNFDFLVILFILNETVF-HENYTYPDLEELRLS 425
IP + V L+E VF H N T D EL ++
Sbjct: 355 DIPCASPSS----VAGLDLSEVVFAHLNSTCLDPPELNMT 390
Score = 149 (57.5 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 74/268 (27%), Positives = 117/268 (43%)
Query: 21 TINLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNP-LRI 78
+INL+ N ++ + E AF SL L ++ +S I P F L L +L ++ N +R
Sbjct: 62 SINLDKNSLKFLSERAFGTLPSLKTLSLKYNNISFITPGAFKGLPNLVELKMAHNEYIRY 121
Query: 79 IEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLG 138
+ F L L L L+ CNL + F LK L QN + + L +
Sbjct: 122 LHTRTFTALKRLVRLDLSDCNLFNMPDRIFLEQITLKELLCFQNNFR-RVPGAL--RGME 178
Query: 139 KLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENEL-IDLDVATTLGQNLVHLDSLDLSN 197
L + L ++ I + N T L+ LNL EN + + D A ++L+ L++ L N
Sbjct: 179 NLTHVYLERNKIEAVAYNSLLGLTSLKYLNLQENRINVIHDEAF---KDLIRLENFYL-N 234
Query: 198 CHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANT 257
+L L + AF + L+ L L GN L+ L +L L L LS + +
Sbjct: 235 DNLLVDLPQQAFKGLSNLKMLNLGGNLLTNVS-KTWFSDLVELEVLYLDRNRLSYIEDGS 293
Query: 258 FHRFTCLQELDISHNPLIDAFTALLSPL 285
F T L L ++ N L ++ P+
Sbjct: 294 FENLTSLITLHLNSNNLTSLPFSVFQPI 321
Score = 137 (53.3 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 42/120 (35%), Positives = 57/120 (47%)
Query: 8 YNDRRNLDNPGLITINLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTL 66
YN L + L +NL N I + + AF L Y+ + L + Q F L+ L
Sbjct: 195 YNSLLGLTS--LKYLNLQENRINVIHDEAFKDLIRLENFYLNDNLLVDLPQQAFKGLSNL 252
Query: 67 NKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKS 126
L+L GN L + F L LE L L+R L+YI +F+NL L TL L+ N L S
Sbjct: 253 KMLNLGGNLLTNVSKTWFSDLVELEVLYLDRNRLSYIEDGSFENLTSLITLHLNSNNLTS 312
Score = 131 (51.2 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 86/339 (25%), Positives = 139/339 (41%)
Query: 51 TLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSL-EYLMLNRCNLTYISPSAFD 109
+L ++ + F L +L L L N + I PG F L +L E M + + Y+ F
Sbjct: 69 SLKFLSERAFGTLPSLKTLSLKYNNISFITPGAFKGLPNLVELKMAHNEYIRYLHTRTFT 128
Query: 110 NLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNL 169
L L L+LS L + D + L + L L Q+ +P + L ++ L
Sbjct: 129 ALKRLVRLDLSDCNLFNMPD-RIFLEQI-TLKELLCFQNNFRRVPGALRGMEN-LTHVYL 185
Query: 170 AENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAAD 229
N++ + + LG L L L+L + + ++AF + +L YL+ N L D
Sbjct: 186 ERNKIEAVAYNSLLG--LTSLKYLNLQENRIN-VIHDEAFKDLIRLENFYLNDNLL--VD 240
Query: 230 L-SVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESL 288
L A K L+ L L+L L+ + F L+ L + N L L SL
Sbjct: 241 LPQQAFKGLSNLKMLNLGGNLLTNVSKTWFSDLVELEVLYLDRNRLSYIEDGSFENLTSL 300
Query: 289 EHLDMGYSNLQRISRSTFLKMTSLKTLILSGNK------LETLESGL--FQNLTHLSVLE 340
L + +NL + S F + + L L N LE L + ++ + +
Sbjct: 301 ITLHLNSNNLTSLPFSVFQPIYFIGRLYLFRNPWECTCDLEWLREWMESYKLVRDIPCAS 360
Query: 341 LNNCGLTRLNETVF-HENYTYPDLEELRLSGNPLHVLPD 378
++ L+E VF H N T D EL ++ + LPD
Sbjct: 361 PSSVAGLDLSEVVFAHLNSTCLDPPELNMTTS----LPD 395
>UNIPROTKB|F1NHG5 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0001656
"metanephros development" evidence=IEA] [GO:0001657 "ureteric bud
development" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001933 "negative regulation of
protein phosphorylation" evidence=IEA] [GO:0002042 "cell migration
involved in sprouting angiogenesis" evidence=IEA] [GO:0005095
"GTPase inhibitor activity" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0008201 "heparin binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0010593
"negative regulation of lamellipodium assembly" evidence=IEA]
[GO:0010596 "negative regulation of endothelial cell migration"
evidence=IEA] [GO:0010629 "negative regulation of gene expression"
evidence=IEA] [GO:0016337 "cell-cell adhesion" evidence=IEA]
[GO:0021836 "chemorepulsion involved in postnatal olfactory bulb
interneuron migration" evidence=IEA] [GO:0021972 "corticospinal
neuron axon guidance through spinal cord" evidence=IEA] [GO:0030308
"negative regulation of cell growth" evidence=IEA] [GO:0030837
"negative regulation of actin filament polymerization"
evidence=IEA] [GO:0031290 "retinal ganglion cell axon guidance"
evidence=IEA] [GO:0032870 "cellular response to hormone stimulus"
evidence=IEA] [GO:0033563 "dorsal/ventral axon guidance"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043116 "negative regulation of vascular
permeability" evidence=IEA] [GO:0043237 "laminin-1 binding"
evidence=IEA] [GO:0043394 "proteoglycan binding" evidence=IEA]
[GO:0045499 "chemorepellent activity" evidence=IEA] [GO:0048495
"Roundabout binding" evidence=IEA] [GO:0048754 "branching
morphogenesis of an epithelial tube" evidence=IEA] [GO:0048846
"axon extension involved in axon guidance" evidence=IEA]
[GO:0050929 "induction of negative chemotaxis" evidence=IEA]
[GO:0051058 "negative regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0051414 "response to cortisol
stimulus" evidence=IEA] [GO:0060763 "mammary duct terminal end bud
growth" evidence=IEA] [GO:0061364 "apoptotic process involved in
luteolysis" evidence=IEA] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IEA] [GO:0071504
"cellular response to heparin" evidence=IEA] [GO:0071672 "negative
regulation of smooth muscle cell chemotaxis" evidence=IEA]
[GO:0071676 "negative regulation of mononuclear cell migration"
evidence=IEA] [GO:0090024 "negative regulation of neutrophil
chemotaxis" evidence=IEA] [GO:0090260 "negative regulation of
retinal ganglion cell axon guidance" evidence=IEA] [GO:0090288
"negative regulation of cellular response to growth factor
stimulus" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005737
GO:GO:0008285 GO:GO:0005615 GO:GO:0009986 GO:GO:0030308
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0008201 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0043065 GO:GO:0071504 GO:GO:0005095
GO:GO:0016337 PROSITE:PS01186 GO:GO:0032870 GO:GO:0030837
GO:GO:0010629 InterPro:IPR003645 InterPro:IPR001791 Pfam:PF00054
SMART:SM00274 SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025
GO:GO:0071672 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 GO:GO:0010596 GO:GO:0001933
GO:GO:0071676 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 GO:GO:0070100 GO:GO:0090288 GO:GO:0045499
Pfam:PF01463 GO:GO:0010593 GO:GO:0051414
GeneTree:ENSGT00700000104083 GO:GO:0050929 GO:GO:0090024
GO:GO:0051058 OMA:RHKMFKG EMBL:AADN02015249 EMBL:AADN02015250
EMBL:AADN02015251 EMBL:AADN02015252 EMBL:AADN02015253
EMBL:AADN02015254 EMBL:AADN02015255 EMBL:AADN02015256
EMBL:AADN02015257 EMBL:AADN02015258 EMBL:AADN02015259
EMBL:AADN02015260 EMBL:AADN02015261 EMBL:AADN02015262
EMBL:AADN02015263 EMBL:AADN02015264 EMBL:AADN02015265
EMBL:AADN02015266 EMBL:AADN02015267 EMBL:AADN02015268
EMBL:AADN02015269 EMBL:AADN02015270 EMBL:AADN02015271
IPI:IPI00883181 Ensembl:ENSGALT00000023294 ArrayExpress:F1NHG5
Uniprot:F1NHG5
Length = 1525
Score = 207 (77.9 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 83/329 (25%), Positives = 146/329 (44%)
Query: 17 PGLIT-INLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGN 74
P IT I L N I+ + GAF + L + + +S+ P F L +LN L L GN
Sbjct: 295 PETITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISEAAPDAFQGLRSLNSLVLYGN 354
Query: 75 PLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVL 134
+ + G+F+ L SL+ L+LN + + AF +L++L L L NKL++ T
Sbjct: 355 KITELPKGLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTF-- 412
Query: 135 GNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLD 194
L + TL L Q+ P + WL + L N + T + L +
Sbjct: 413 SPLRAIQTLHLAQN-----PFICDCHLKWLADY-LHTNPIETSGARCTSPRRLANKRIGQ 466
Query: 195 LSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLP 254
+ + + E F+ T+ LSG+ ADL+ K + + N L+++P
Sbjct: 467 IKSKKFRCSAKEQYFIPGTEDYRSKLSGDCF--ADLACPEKCRCEGTTVDCSNQKLNKIP 524
Query: 255 ANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKT 314
+ ++T L+ + +++A T + L L +++ + + I F + +
Sbjct: 525 DH-IPQYTAELRLNNNEFSVLEA-TGIFKKLPQLRKINLSNNKITDIEEGAFDGASGVNE 582
Query: 315 LILSGNKLETLESGLFQNLTHLSVLELNN 343
L+L+ N+LET+ +F+ L L L L +
Sbjct: 583 LLLTSNRLETVRDKMFKGLESLKTLMLRS 611
Score = 194 (73.4 bits), Expect = 8.9e-15, Sum P(2) = 8.9e-15
Identities = 99/379 (26%), Positives = 153/379 (40%)
Query: 22 INLNANPIQPVEGA-FLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIE 80
++LN N I + F R L L + E +S I F +L L +L L+ N L+++
Sbjct: 56 LDLNGNNITRITKTDFAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNNLQLLS 115
Query: 81 PGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKL 140
+F L L L+ + I AF +K L+L N++ D L L
Sbjct: 116 ELLFLGTPKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRA--LRDL 173
Query: 141 DTLDLRQSGISNLPDNVFANNTWLRNLNLAENELI-DLDVATT---LGQN-LVHLDSLDL 195
+ L L + I+ L F + LR L N L D +A L Q V L + +
Sbjct: 174 EVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCM 233
Query: 196 SNCHLKGPLSEDAFVNATKLRTLYLSGNP-LSAADLSVALKPLTKLHRLSLRNC---GLS 251
HL+G V + R SG+ A SV P ++ +C GL+
Sbjct: 234 GPAHLRGHN-----VAEVQKREFVCSGHQSFMAPSCSVLHCPAACTCSNNIVDCRGKGLT 288
Query: 252 RLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTS 311
+P N T E+ + N + SP + L +D+ + + + F + S
Sbjct: 289 EIPTNLPETIT---EIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISEAAPDAFQGLRS 345
Query: 312 LKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGN 371
L +L+L GNK+ L GLF+ L L +L LN + L F + + +L L L N
Sbjct: 346 LNSLVLYGNKITELPKGLFEGLFSLQLLLLNANKINCLRVDAFQDLH---NLNLLSLYDN 402
Query: 372 PLHVLPDSTKQYSMRTIPT 390
L + T +R I T
Sbjct: 403 KLQTIAKGTFS-PLRAIQT 420
Score = 188 (71.2 bits), Expect = 3.9e-14, Sum P(2) = 3.9e-14
Identities = 82/331 (24%), Positives = 131/331 (39%)
Query: 22 INLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIE 80
+ LN N +Q + E FL L L + E + I + F + L L N + IE
Sbjct: 104 LRLNRNNLQLLSELLFLGTPKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIE 163
Query: 81 PGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKL--KSHI----DWTLVL 134
G F L LE L LN N+T +S ++F+++ L+T L N L H+ DW
Sbjct: 164 DGAFRALRDLEVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQR 223
Query: 135 GNLGK----LDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHL 190
+G + LR ++ + F + ++ ++ A T N+V
Sbjct: 224 PRVGLYTQCMGPAHLRGHNVAEVQKREFVCSGH-QSFMAPSCSVLHCPAACTCSNNIV-- 280
Query: 191 DSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGL 250
+C KG L+E + + L N + A P KL R+ L N +
Sbjct: 281 ------DCRGKG-LTEIPTNLPETITEIRLEQNSIKVIPPG-AFSPYKKLRRIDLSNNQI 332
Query: 251 SRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMT 310
S + F L L + N + + L L SL+ L + + + + F +
Sbjct: 333 SEAAPDAFQGLRSLNSLVLYGNKITELPKGLFEGLFSLQLLLLNANKINCLRVDAFQDLH 392
Query: 311 SLKTLILSGNKLETLESGLFQNLTHLSVLEL 341
+L L L NKL+T+ G F L + L L
Sbjct: 393 NLNLLSLYDNKLQTIAKGTFSPLRAIQTLHL 423
Score = 149 (57.5 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 76/314 (24%), Positives = 130/314 (41%)
Query: 17 PGLITINLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNP 75
P L INL+ N I +E GAF A + L + L + + F L +L L L N
Sbjct: 554 PQLRKINLSNNKITDIEEGAFDGASGVNELLLTSNRLETVRDKMFKGLESLKTLMLRSNR 613
Query: 76 LRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKS--HIDWTLV 133
+ + F L+S+ L L +T ++P +FD L+ L TL L N H+ W
Sbjct: 614 VSCVGNDSFTGLSSVRLLSLYDNQITTVAPGSFDTLHSLSTLNLLANPFNCNCHLAW--- 670
Query: 134 LGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAE---NELIDLDVATTLGQNLVHL 190
LG+ + + +G F ++++ + + ++ D + + L +
Sbjct: 671 LGDWLRKKRI---VTGNPRCQKPYFLKEIPIQDVAIQDFTCDDGNDDNSCSPLSRCPAEC 727
Query: 191 DSLD-LSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVA-LKPLTKLHRLSLRNC 248
LD + C KG + + + LYL GN + ++ K LT + L N
Sbjct: 728 TCLDTVVRCSNKGLKALPKGI-PKDVTELYLDGNQFTLVPKELSNYKHLTLI---DLSNN 783
Query: 249 GLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLK 308
+S L +F T L L +S+N L L+SL L + +++ + F
Sbjct: 784 RISTLSNQSFSNMTQLLTLILSYNRLRCIPARTFDGLKSLRLLSLHGNDISVVPEGAFND 843
Query: 309 MTSLKTLILSGNKL 322
+++L L + N L
Sbjct: 844 LSALSHLAIGANPL 857
Score = 138 (53.6 bits), Expect = 2.6e-15, Sum P(3) = 2.6e-15
Identities = 50/158 (31%), Positives = 77/158 (48%)
Query: 68 KLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSH 127
+LDL+GN + I F L L L L ++ I AF +L L+ L L++N L+
Sbjct: 55 RLDLNGNNITRITKTDFAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNNLQL- 113
Query: 128 IDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNL 187
+ L LG KL LDL ++ I +P F ++NL L N++ ++ + L
Sbjct: 114 LSELLFLGT-PKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAF--RAL 170
Query: 188 VHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPL 225
L+ L L+N ++ LS +F + KLRT L N L
Sbjct: 171 RDLEVLTLNNNNITR-LSVASFNHMPKLRTFRLHSNNL 207
Score = 132 (51.5 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 33/89 (37%), Positives = 48/89 (53%)
Query: 289 EHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTR 348
E LD+ +N+ RI+++ F + L+ L L NK+ T+E G FQ+L L L LN L
Sbjct: 54 ERLDLNGNNITRITKTDFAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNNLQL 113
Query: 349 LNETVFHENYTYPDLEELRLSGNPLHVLP 377
L+E +F P L L LS N + +P
Sbjct: 114 LSELLFLGT---PKLYRLDLSENQIQAIP 139
Score = 113 (44.8 bits), Expect = 4.5e-13, Sum P(3) = 4.5e-13
Identities = 32/124 (25%), Positives = 60/124 (48%)
Query: 218 LYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDA 277
L L+ N S + + K L +L +++L N ++ + F + + EL ++ N L
Sbjct: 534 LRLNNNEFSVLEATGIFKKLPQLRKINLSNNKITDIEEGAFDGASGVNELLLTSNRLETV 593
Query: 278 FTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLS 337
+ LESL+ L + + + + +F ++S++ L L N++ T+ G F L LS
Sbjct: 594 RDKMFKGLESLKTLMLRSNRVSCVGNDSFTGLSSVRLLSLYDNQITTVAPGSFDTLHSLS 653
Query: 338 VLEL 341
L L
Sbjct: 654 TLNL 657
Score = 111 (44.1 bits), Expect = 2.6e-15, Sum P(3) = 2.6e-15
Identities = 32/130 (24%), Positives = 62/130 (47%)
Query: 243 LSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRIS 302
+ L + +P F + L+ +D+S+N + +A L SL L + + + +
Sbjct: 301 IRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISEAAPDAFQGLRSLNSLVLYGNKITELP 360
Query: 303 RSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPD 362
+ F + SL+ L+L+ NK+ L FQ+L +L++L L + L + + F
Sbjct: 361 KGLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRA--- 417
Query: 363 LEELRLSGNP 372
++ L L+ NP
Sbjct: 418 IQTLHLAQNP 427
Score = 110 (43.8 bits), Expect = 2.5e-12, Sum P(3) = 2.5e-12
Identities = 51/183 (27%), Positives = 86/183 (46%)
Query: 69 LDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHI 128
+D G LR + + P + E L LN N+T I+ + F L HL+ L+L +NK+ S I
Sbjct: 35 VDCHGLALRGVPRNI--PRNT-ERLDLNGNNITRITKTDFAGLRHLRVLQLMENKI-STI 90
Query: 129 DWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLV 188
+ +L +L+ L L ++ + L + +F L L+L+EN++ + G V
Sbjct: 91 ERG-AFQDLKELERLRLNRNNLQLLSELLFLGTPKLYRLDLSENQIQAIPRKAFRGA--V 147
Query: 189 HLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVA-LKPLTKLHRLSLRN 247
+ +L L + + + AF L L L+ N ++ LSVA + KL L +
Sbjct: 148 DIKNLQLDYNQISC-IEDGAFRALRDLEVLTLNNNNITR--LSVASFNHMPKLRTFRLHS 204
Query: 248 CGL 250
L
Sbjct: 205 NNL 207
Score = 110 (43.8 bits), Expect = 2.9e-11, Sum P(2) = 2.9e-11
Identities = 39/131 (29%), Positives = 60/131 (45%)
Query: 247 NCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHL---DMGYSNLQRISR 303
N GL LP T EL + N FT + L + +HL D+ + + +S
Sbjct: 738 NKGLKALPKGIPKDVT---ELYLDGNQ----FTLVPKELSNYKHLTLIDLSNNRISTLSN 790
Query: 304 STFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDL 363
+F MT L TLILS N+L + + F L L +L L+ ++ + E F++ L
Sbjct: 791 QSFSNMTQLLTLILSYNRLRCIPARTFDGLKSLRLLSLHGNDISVVPEGAFND---LSAL 847
Query: 364 EELRLSGNPLH 374
L + NPL+
Sbjct: 848 SHLAIGANPLY 858
Score = 102 (41.0 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 33/130 (25%), Positives = 56/130 (43%)
Query: 242 RLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRI 301
RL L ++R+ F L+ L + N + L+ LE L + +NLQ +
Sbjct: 55 RLDLNGNNITRITKTDFAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNNLQLL 114
Query: 302 SRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYP 361
S FL L L LS N+++ + F+ + L+L+ ++ + + F
Sbjct: 115 SELLFLGTPKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFR---ALR 171
Query: 362 DLEELRLSGN 371
DLE L L+ N
Sbjct: 172 DLEVLTLNNN 181
Score = 95 (38.5 bits), Expect = 3.0e-11, Sum P(3) = 3.0e-11
Identities = 33/133 (24%), Positives = 59/133 (44%)
Query: 243 LSLRNCGLSRLPAN-TFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRI 301
L L N S L A F + L+++++S+N + D + L + + L+ +
Sbjct: 534 LRLNNNEFSVLEATGIFKKLPQLRKINLSNNKITDIEEGAFDGASGVNELLLTSNRLETV 593
Query: 302 SRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYP 361
F + SLKTL+L N++ + + F L+ + +L L + +T + F T
Sbjct: 594 RDKMFKGLESLKTLMLRSNRVSCVGNDSFTGLSSVRLLSLYDNQITTVAPGSFD---TLH 650
Query: 362 DLEELRLSGNPLH 374
L L L NP +
Sbjct: 651 SLSTLNLLANPFN 663
Score = 86 (35.3 bits), Expect = 2.6e-15, Sum P(3) = 2.6e-15
Identities = 35/180 (19%), Positives = 73/180 (40%)
Query: 369 SGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNET-VFHENYTYPDLEELRLSGN 427
S L+ +PD QY T ++ N +F V L T +F + P L ++ LS N
Sbjct: 516 SNQKLNKIPDHIPQY---TAELRL-NNNEFSV----LEATGIFKK---LPQLRKINLSNN 564
Query: 428 PLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSF 487
+ + G +++ + +F ++ +L L +N +S SF
Sbjct: 565 KITDIEEGAFDGASGVNELLLTSN--RLETVRDKMFKGLESLKTLMLRSNRVSCVGNDSF 622
Query: 488 QFXXXXXXXXXXXXXXXXXTHISPTVLRHNRAITSIKLVGNPWKCDCNIADMWEWATREK 547
T ++P +++++ L+ NP+ C+C++A + +W +++
Sbjct: 623 ---TGLSSVRLLSLYDNQITTVAPGSFDTLHSLSTLNLLANPFNCNCHLAWLGDWLRKKR 679
Score = 62 (26.9 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 26/135 (19%), Positives = 46/135 (34%)
Query: 418 DLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANN 477
D+ EL L GN ++P +I L F+N + +L L+ N
Sbjct: 751 DVTELYLDGNQFTLVPK---ELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 807
Query: 478 NLSMTSELSFQFXXXXXXXXXXXXXXXXXTHISPTVLRHNRAITSIKLVGNPWKCDCNIA 537
L +F + + A++ + + NP CDCN+
Sbjct: 808 RLRCIPARTFD---GLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQ 864
Query: 538 DMWEWATREKGDIGV 552
+ +W E + G+
Sbjct: 865 WLSDWVKSEYKEPGI 879
Score = 55 (24.4 bits), Expect = 2.0e-06, Sum P(3) = 2.0e-06
Identities = 10/34 (29%), Positives = 20/34 (58%)
Query: 455 IDYLPPNVFNNTRNITSLNLANNNLSMTSELSFQ 488
I +PP F+ + + ++L+NN +S + +FQ
Sbjct: 308 IKVIPPGAFSPYKKLRRIDLSNNQISEAAPDAFQ 341
Score = 54 (24.1 bits), Expect = 4.6e-12, Sum P(3) = 4.6e-12
Identities = 9/19 (47%), Positives = 14/19 (73%)
Query: 518 RAITSIKLVGNPWKCDCNI 536
RAI ++ L NP+ CDC++
Sbjct: 416 RAIQTLHLAQNPFICDCHL 434
Score = 50 (22.7 bits), Expect = 6.2e-06, Sum P(3) = 6.2e-06
Identities = 15/62 (24%), Positives = 25/62 (40%)
Query: 419 LEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNN 478
+ E+RL N + V+P G +I P+ F R++ SL L N
Sbjct: 298 ITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNN--QISEAAPDAFQGLRSLNSLVLYGNK 355
Query: 479 LS 480
++
Sbjct: 356 IT 357
>TAIR|locus:2094603 [details] [associations]
symbol:RLP37 "receptor like protein 37" species:3702
"Arabidopsis thaliana" [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006952 "defense response" evidence=ISS] [GO:0016301 "kinase
activity" evidence=ISS] [GO:0007165 "signal transduction"
evidence=IC] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
EMBL:CP002686 GenomeReviews:BA000014_GR eggNOG:COG4886
InterPro:IPR025875 Pfam:PF12799 InterPro:IPR013210 Pfam:PF08263
EMBL:AB026655 HOGENOM:HOG000116562 ProtClustDB:CLSN2684197
IPI:IPI00538273 RefSeq:NP_188952.1 UniGene:At.65132
ProteinModelPortal:Q9LS80 SMR:Q9LS80 PRIDE:Q9LS80
EnsemblPlants:AT3G23110.1 GeneID:821886 KEGG:ath:AT3G23110
TAIR:At3g23110 InParanoid:Q9LS80 OMA:INCEWME PhylomeDB:Q9LS80
Genevestigator:Q9LS80 Uniprot:Q9LS80
Length = 835
Score = 232 (86.7 bits), Expect = 3.1e-15, Sum P(2) = 3.1e-15
Identities = 85/266 (31%), Positives = 130/266 (48%)
Query: 87 LTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLR 146
L L +L L+ CNL PS+ NL+HL L+LS N+L ++ + +GNL +L+ +DL
Sbjct: 111 LRHLRHLELSHCNLQGEIPSSIGNLSHLTYLDLSFNQLVG--EFPVSIGNLNQLEYIDLW 168
Query: 147 QSGIS-NLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLS 205
+ + N+P + FAN T L L+L +N+ D+ + NL L +DLS+ + +S
Sbjct: 169 VNALGGNIPTS-FANLTKLSELHLRQNQFTGGDIVLS---NLTSLSIVDLSSNYFNSTIS 224
Query: 206 EDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTC-- 263
D L ++S N S L + L + L P N F T
Sbjct: 225 AD-LSQLHNLERFWVSENSFFGPFPSFLLM-IPSLVDICLSENQFEG-PIN-FGNTTSSS 280
Query: 264 -LQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKL 322
L ELD+S+N L +S L SLEHL++ ++N + S+ K+ +L L LS N
Sbjct: 281 KLTELDVSYNNLDGLIPKSISTLVSLEHLELSHNNFRGQVPSSISKLVNLDGLYLSHNNF 340
Query: 323 E-TLESGLFQ--NLTHLSVLELNNCG 345
+ S +F+ NL HL L N+ G
Sbjct: 341 GGQVPSSIFKLVNLEHLD-LSHNDFG 365
Score = 194 (73.4 bits), Expect = 4.3e-11, Sum P(2) = 4.3e-11
Identities = 88/311 (28%), Positives = 135/311 (43%)
Query: 19 LITINLN---ANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNP 75
+I++NL AN + R L +L + C L P NL+ L LDLS N
Sbjct: 88 VISLNLVSYIANTSLKSSSSLFKLRHLRHLELSHCNLQGEIPSSIGNLSHLTYLDLSFNQ 147
Query: 76 LRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLG 135
L P L LEY+ L L P++F NL L L L QN+ D +VL
Sbjct: 148 LVGEFPVSIGNLNQLEYIDLWVNALGGNIPTSFANLTKLSELHLRQNQFTGG-D--IVLS 204
Query: 136 NLGKLDTLDLRQSGISNLPDNVFANNTWLRNLN---LAENELIDLDVATTLGQNLVHLDS 192
NL L +DL S N + A+ + L NL ++EN + L + L
Sbjct: 205 NLTSLSIVDL-SSNYFN--STISADLSQLHNLERFWVSENSFFGPFPSFLL--MIPSLVD 259
Query: 193 LDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSR 252
+ LS +GP++ +++KL L +S N L + ++ L L L L +
Sbjct: 260 ICLSENQFEGPINFGNTTSSSKLTELDVSYNNLDGL-IPKSISTLVSLEHLELSHNNFRG 318
Query: 253 LPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSL 312
++ + L L +SHN + + L +LEHLD+ +++ S+ K+ +L
Sbjct: 319 QVPSSISKLVNLDGLYLSHNNFGGQVPSSIFKLVNLEHLDLSHNDFGGRVPSSISKLVNL 378
Query: 313 KTLILSGNKLE 323
+L LS NK E
Sbjct: 379 SSLDLSYNKFE 389
Score = 161 (61.7 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 83/304 (27%), Positives = 135/304 (44%)
Query: 43 LYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTY 102
L Y+ +L + F L L L+LS L+ P L+ L YL L+ L
Sbjct: 93 LVSYIANTSLKSSSSLF--KLRHLRHLELSHCNLQGEIPSSIGNLSHLTYLDLSFNQLVG 150
Query: 103 ISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNT 162
P + NLN L+ ++L N L +I + NL KL L LRQ+ + D V +N T
Sbjct: 151 EFPVSIGNLNQLEYIDLWVNALGGNIPTSFA--NLTKLSELHLRQNQFTG-GDIVLSNLT 207
Query: 163 WLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSG 222
L ++L+ N + ++ L Q L +L+ +S GP + L + LS
Sbjct: 208 SLSIVDLSSN-YFNSTISADLSQ-LHNLERFWVSENSFFGPFPSFLLM-IPSLVDICLSE 264
Query: 223 N----PLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAF 278
N P++ + + + K LT+L +S N L L + L+ L++SHN
Sbjct: 265 NQFEGPINFGNTTSSSK-LTELD-VSYNN--LDGLIPKSISTLVSLEHLELSHNNFRGQV 320
Query: 279 TALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSV 338
+ +S L +L+ L + ++N S+ K+ +L+ L LS N L +LS
Sbjct: 321 PSSISKLVNLDGLYLSHNNFGGQVPSSIFKLVNLEHLDLSHNDFGGRVPSSISKLVNLSS 380
Query: 339 LELN 342
L+L+
Sbjct: 381 LDLS 384
Score = 159 (61.0 bits), Expect = 8.6e-08, P = 8.6e-08
Identities = 75/287 (26%), Positives = 125/287 (43%)
Query: 57 PQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKT 116
P + L L+ L LS N P L +LE+L L+ + PS+ L +L +
Sbjct: 321 PSSISKLVNLDGLYLSHNNFGGQVPSSIFKLVNLEHLDLSHNDFGGRVPSSISKLVNLSS 380
Query: 117 LELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWL-RNLNLAENELI 175
L+LS NK + H+ + + KLD++DL + ++ + + L R+ +L+ N L
Sbjct: 381 LDLSYNKFEGHVPQCIWRSS--KLDSVDLSYNSFNSFGRILELGDESLERDWDLSSNSLQ 438
Query: 176 DLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSA--ADLSVA 233
+ + N LD SN HL G + + N+T L L N LS D +
Sbjct: 439 G-PIPQWIC-NFRFFSFLDFSNNHLNGSIPQ-CLKNSTDFYMLNLRNNSLSGFMPDFCMD 495
Query: 234 LKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDM 293
L L +SL N + +LP +F ++ L++ N + D F L L+ L L +
Sbjct: 496 GSMLGSLD-VSLNNL-VGKLP-ESFINCEWMEYLNVRGNKIKDTFPVWLGSLQYLTVLVL 552
Query: 294 GYSNLQR--ISRSTFLKMTSLKTLILSGNK-LETLESGLFQNLTHLS 337
+ S +L S++ + +S N + +L F N T +S
Sbjct: 553 RSNTFYGPVYKASAYLGFPSMRIMDISNNNFVGSLPQDYFANWTEMS 599
Score = 44 (20.5 bits), Expect = 3.1e-15, Sum P(2) = 3.1e-15
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 460 PNVFNNTRNITSLNLANNNLS 480
P N+ + LNL NN+LS
Sbjct: 466 PQCLKNSTDFYMLNLRNNSLS 486
>UNIPROTKB|I3LFJ7 [details] [associations]
symbol:NYX "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007601 "visual perception" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] GO:GO:0007601 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005622
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 OMA:NISFITP
GeneTree:ENSGT00690000101803 EMBL:CU582950
Ensembl:ENSSSCT00000023085 Uniprot:I3LFJ7
Length = 477
Score = 208 (78.3 bits), Expect = 3.7e-15, Sum P(2) = 3.7e-15
Identities = 73/263 (27%), Positives = 116/263 (44%)
Query: 69 LDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHI 128
+DL N LR + F L SL L L NL++I+P AF L L L L+ N ++
Sbjct: 63 IDLDRNGLRFLGERAFGTLPSLRRLSLRHNNLSFITPGAFKGLPRLAELRLAHNGDLRYL 122
Query: 129 DWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLV 188
LG+L LDL + ++P+ + A LR L +N + V L + L
Sbjct: 123 H-ARTFAALGRLRRLDLAACRLFSVPERLLAELPALRELAAFDN--LFRRVPGAL-RGLA 178
Query: 189 HLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNC 248
+L L ++ ++ + + +LR+L L N + A + L L L +
Sbjct: 179 NLTHAHLERSRIEA-VASSSLLGLRRLRSLSLQANRVRTVH-GGAFRDCGSLEHLLLNDN 236
Query: 249 GLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLK 308
L+ LPA+ FH L+ L++ N L A + L LE L + +++ + F
Sbjct: 237 LLAALPADAFHGLRHLRTLNLGGNALGRVARAWFAELAELELLYLDRNSIAFVEEGAFQN 296
Query: 309 MTSLKTLILSGNKLETLESGLFQ 331
++ L L L+GN L L FQ
Sbjct: 297 LSGLLALHLNGNHLTMLAWAAFQ 319
Score = 162 (62.1 bits), Expect = 4.9e-10, Sum P(2) = 4.9e-10
Identities = 84/281 (29%), Positives = 119/281 (42%)
Query: 95 LNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSG-ISNL 153
L+R L ++ AF L L+ L L N L S I G L +L L L +G + L
Sbjct: 65 LDRNGLRFLGERAFGTLPSLRRLSLRHNNL-SFITPGAFKG-LPRLAELRLAHNGDLRYL 122
Query: 154 PDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLD-LSNCHLKGPLSEDAFVNA 212
FA LR L+LA L V L L L L N + P + N
Sbjct: 123 HARTFAALGRLRRLDLAACRLFS--VPERLLAELPALRELAAFDNLFRRVPGALRGLANL 180
Query: 213 TKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHN 272
T +L + + A S +L L +L LSL+ + + F L+ L ++ N
Sbjct: 181 THA---HLERSRIEAV-ASSSLLGLRRLRSLSLQANRVRTVHGGAFRDCGSLEHLLLNDN 236
Query: 273 PLIDAFTA-LLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQ 331
L+ A A L L L++G + L R++R+ F ++ L+ L L N + +E G FQ
Sbjct: 237 -LLAALPADAFHGLRHLRTLNLGGNALGRVARAWFAELAELELLYLDRNSIAFVEEGAFQ 295
Query: 332 NLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNP 372
NL+ L L LN LT L F + L L L NP
Sbjct: 296 NLSGLLALHLNGNHLTMLAWAAFQPGFF---LGHLFLFRNP 333
Score = 141 (54.7 bits), Expect = 9.9e-08, Sum P(2) = 9.9e-08
Identities = 45/159 (28%), Positives = 70/159 (44%)
Query: 17 PGLITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPL 76
P L + N + V GA +L + +++ + + L L L L N +
Sbjct: 155 PALRELAAFDNLFRRVPGALRGLANLTHAHLERSRIEAVASSSLLGLRRLRSLSLQANRV 214
Query: 77 RIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKL-KSHIDWTLVLG 135
R + G F SLE+L+LN L + AF L HL+TL L N L + W
Sbjct: 215 RTVHGGAFRDCGSLEHLLLNDNLLAALPADAFHGLRHLRTLNLGGNALGRVARAW---FA 271
Query: 136 NLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENEL 174
L +L+ L L ++ I+ + + F N + L L+L N L
Sbjct: 272 ELAELELLYLDRNSIAFVEEGAFQNLSGLLALHLNGNHL 310
Score = 130 (50.8 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 77/275 (28%), Positives = 106/275 (38%)
Query: 21 TINLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGN-PLRI 78
+I+L+ N ++ + E AF SL L ++ LS I P F L L +L L+ N LR
Sbjct: 62 SIDLDRNGLRFLGERAFGTLPSLRRLSLRHNNLSFITPGAFKGLPRLAELRLAHNGDLRY 121
Query: 79 IEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLG 138
+ F L L L L C L + L L+ L N + + L L
Sbjct: 122 LHARTFAALGRLRRLDLAACRLFSVPERLLAELPALRELAAFDNLFR-RVPGAL--RGLA 178
Query: 139 KLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLD--LS 196
L L +S I + + LR+L+L N V T G SL+ L
Sbjct: 179 NLTHAHLERSRIEAVASSSLLGLRRLRSLSLQANR-----VRTVHGGAFRDCGSLEHLLL 233
Query: 197 NCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPAN 256
N +L L DAF LRTL L GN L L +L L L ++ +
Sbjct: 234 NDNLLAALPADAFHGLRHLRTLNLGGNALGRV-ARAWFAELAELELLYLDRNSIAFVEEG 292
Query: 257 TFHRFTCLQELDISHNPLIDAFTALLSPLESLEHL 291
F + L L ++ N L A P L HL
Sbjct: 293 AFQNLSGLLALHLNGNHLTMLAWAAFQPGFFLGHL 327
Score = 111 (44.1 bits), Expect = 2.8e-05, Sum P(3) = 2.8e-05
Identities = 69/248 (27%), Positives = 102/248 (41%)
Query: 142 TLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLS-NCHL 200
++DL ++G+ L + F LR L+L N L + G L L L L+ N L
Sbjct: 62 SIDLDRNGLRFLGERAFGTLPSLRRLSLRHNNLSFITPGAFKG--LPRLAELRLAHNGDL 119
Query: 201 KGPLSEDAFVNATKLRTLYLSGNPLSA------ADLSVALKPLTKLHRLSLRNCGLSRLP 254
+ L F +LR L L+ L + A+L AL+ L L R G R
Sbjct: 120 RY-LHARTFAALGRLRRLDLAACRLFSVPERLLAELP-ALRELAAFDNLFRRVPGALRGL 177
Query: 255 ANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKT 314
AN H L+ S + A ++LL L L L + + ++ + F SL+
Sbjct: 178 ANLTHA-----HLERSRIEAV-ASSSLLG-LRRLRSLSLQANRVRTVHGGAFRDCGSLEH 230
Query: 315 LILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLH 374
L+L+ N L L + F L HL L L L R+ F E +LE L L N +
Sbjct: 231 LLLNDNLLAALPADAFHGLRHLRTLNLGGNALGRVARAWFAE---LAELELLYLDRNSIA 287
Query: 375 VLPDSTKQ 382
+ + Q
Sbjct: 288 FVEEGAFQ 295
Score = 109 (43.4 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 67/249 (26%), Positives = 100/249 (40%)
Query: 60 FTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLML-NRCNLTYISPSAFDNLNHLKTLE 118
F L +L +L L N L I PG F L L L L + +L Y+ F L L+ L+
Sbjct: 78 FGTLPSLRRLSLRHNNLSFITPGAFKGLPRLAELRLAHNGDLRYLHARTFAALGRLRRLD 137
Query: 119 LSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLD 178
L+ +L S + +L L L L + NL V L NL A E ++
Sbjct: 138 LAACRLFSVPE--RLLAELPALREL----AAFDNLFRRVPGALRGLANLTHAHLERSRIE 191
Query: 179 -VATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPL 237
VA++ L L SL L ++ + AF + L L L+ N L+A A L
Sbjct: 192 AVASSSLLGLRRLRSLSLQANRVR-TVHGGAFRDCGSLEHLLLNDNLLAALPAD-AFHGL 249
Query: 238 TKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSN 297
L L+L L R+ F L+ L + N + L L L + ++
Sbjct: 250 RHLRTLNLGGNALGRVARAWFAELAELELLYLDRNSIAFVEEGAFQNLSGLLALHLNGNH 309
Query: 298 LQRISRSTF 306
L ++ + F
Sbjct: 310 LTMLAWAAF 318
Score = 60 (26.2 bits), Expect = 3.7e-15, Sum P(2) = 3.7e-15
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 525 LVGNPWKCDCNIADMWEW 542
L NPW+CDC + + +W
Sbjct: 329 LFRNPWRCDCRLEWLRDW 346
Score = 48 (22.0 bits), Expect = 2.8e-05, Sum P(3) = 2.8e-05
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 455 IDYLPPNVFNNTRNITSLNLANNNLSMTSELSFQ 488
I ++ F N + +L+L N+L+M + +FQ
Sbjct: 286 IAFVEEGAFQNLSGLLALHLNGNHLTMLAWAAFQ 319
>MGI|MGI:2443718 [details] [associations]
symbol:Lrig2 "leucine-rich repeats and immunoglobulin-like
domains 2" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:2443718 GO:GO:0016021 GO:GO:0005886
GO:GO:0005737 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679
GeneTree:ENSGT00690000101816 HOGENOM:HOG000113380
HOVERGEN:HBG052353 CTD:9860 OMA:FPTNHER OrthoDB:EOG41NTKF
EMBL:AK173030 EMBL:BC094228 IPI:IPI00605095 IPI:IPI00649164
RefSeq:NP_001020238.1 UniGene:Mm.34855 ProteinModelPortal:Q52KR2
SMR:Q52KR2 PhosphoSite:Q52KR2 PRIDE:Q52KR2
Ensembl:ENSMUST00000046316 GeneID:269473 KEGG:mmu:269473
UCSC:uc008que.1 UCSC:uc012cvk.1 InParanoid:Q52KR2 NextBio:392862
Bgee:Q52KR2 Genevestigator:Q52KR2 GermOnline:ENSMUSG00000032913
Uniprot:Q52KR2
Length = 1054
Score = 233 (87.1 bits), Expect = 3.8e-15, Sum P(2) = 3.8e-15
Identities = 86/354 (24%), Positives = 162/354 (45%)
Query: 9 NDRRNLDNPGLITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNK 68
N L++ L + +N N + + ++ L + + +IN + F + L
Sbjct: 88 NWNNTLESQTLQEVKMNYNELTEIPYFGEPTPNITLLSLVHNLIPEINAEAFELYSALES 147
Query: 69 LDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNH-LKTLELSQNKLKSH 127
LDLS N + I+ F P SL+YL L+ ++ + FDNL+ L ++L++N++ S
Sbjct: 148 LDLSSNIISEIKTSSF-PRMSLKYLNLSNNRISTLEAGCFDNLSDSLLVVKLNRNRI-SM 205
Query: 128 IDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNL 187
I + L L L+L+++ I + F LR+L + N + L G N
Sbjct: 206 IPPKVF--KLPHLQFLELKRNRIKIVEGLTFQGLDSLRSLKMQRNGISKLKDGAFFGLN- 262
Query: 188 VHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRN 247
+++ L+L + +L G +++ L+ LY+S N + A + +L L L
Sbjct: 263 -NMEELELEHNNLTG-VNKGWLYGLRMLQQLYMSQNAIEKISPD-AWEFCQRLSELDLSY 319
Query: 248 CGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQ---RISRS 304
L+RL + F + L+ L++ N + + L +L+ LD+ +++ +
Sbjct: 320 NQLTRLDESAFVGLSLLERLNLGDNRVTHIADGVFRFLSNLQTLDLRNNDISWAIEDASE 379
Query: 305 TFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENY 358
F + SL LIL GN+++++ F L L L+LNN + + E F + +
Sbjct: 380 AFSGLKSLTKLILQGNRIKSVTQKAFIGLESLEYLDLNNNAIMSIQENAFSQTH 433
Score = 179 (68.1 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 68/267 (25%), Positives = 118/267 (44%)
Query: 13 NLDNPGLITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLS 72
NL + L+ + LN N I + L +L ++ + + F L +L L +
Sbjct: 188 NLSD-SLLVVKLNRNRISMIPPKVFKLPHLQFLELKRNRIKIVEGLTFQGLDSLRSLKMQ 246
Query: 73 GNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLK--SHIDW 130
N + ++ G F L ++E L L NLT ++ L L+ L +SQN ++ S W
Sbjct: 247 RNGISKLKDGAFFGLNNMEELELEHNNLTGVNKGWLYGLRMLQQLYMSQNAIEKISPDAW 306
Query: 131 TLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHL 190
+L LDL + ++ L ++ F + L LNL +N + +A + + L +L
Sbjct: 307 EFCQ----RLSELDLSYNQLTRLDESAFVGLSLLERLNLGDNRVTH--IADGVFRFLSNL 360
Query: 191 DSLDLSNCHLKGPLSE--DAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNC 248
+LDL N + + + +AF L L L GN + + A L L L L N
Sbjct: 361 QTLDLRNNDISWAIEDASEAFSGLKSLTKLILQGNRIKSVTQK-AFIGLESLEYLDLNNN 419
Query: 249 GLSRLPANTFHRFTCLQELDISHNPLI 275
+ + N F + T L+ L ++ + L+
Sbjct: 420 AIMSIQENAFSQ-THLKGLVLNTSSLL 445
Score = 169 (64.5 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 79/309 (25%), Positives = 134/309 (43%)
Query: 65 TLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKL 124
TL ++ ++ N L I P +P ++ L L + I+ AF+ + L++L+LS N +
Sbjct: 97 TLQEVKMNYNELTEI-PYFGEPTPNITLLSLVHNLIPEINAEAFELYSALESLDLSSNII 155
Query: 125 KSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFAN-NTWLRNLNLAENELIDLDVATTL 183
S I T + L L+L + IS L F N + L + L N + +
Sbjct: 156 -SEIK-TSSFPRMS-LKYLNLSNNRISTLEAGCFDNLSDSLLVVKLNRNRISMIPPKVF- 211
Query: 184 GQNLVHLDSLDLSNCHLKGPLSED-AFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHR 242
L HL L+L +K + E F LR+L + N +S A L +
Sbjct: 212 --KLPHLQFLELKRNRIK--IVEGLTFQGLDSLRSLKMQRNGISKLK-DGAFFGLNNMEE 266
Query: 243 LSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRIS 302
L L + L+ + + LQ+L +S N + + L LD+ Y+ L R+
Sbjct: 267 LELEHNNLTGVNKGWLYGLRMLQQLYMSQNAIEKISPDAWEFCQRLSELDLSYNQLTRLD 326
Query: 303 RSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPD 362
S F+ ++ L+ L L N++ + G+F+ L++L L+L N ++ E
Sbjct: 327 ESAFVGLSLLERLNLGDNRVTHIADGVFRFLSNLQTLDLRNNDISWAIEDASEAFSGLKS 386
Query: 363 LEELRLSGN 371
L +L L GN
Sbjct: 387 LTKLILQGN 395
Score = 160 (61.4 bits), Expect = 9.1e-08, P = 9.1e-08
Identities = 68/236 (28%), Positives = 107/236 (45%)
Query: 22 INLNANPIQPVEGAFLVA-RSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIE 80
+ L N + V +L R L LYM + + KI+P + L++LDLS N L ++
Sbjct: 267 LELEHNNLTGVNKGWLYGLRMLQQLYMSQNAIEKISPDAWEFCQRLSELDLSYNQLTRLD 326
Query: 81 PGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHI-DWTLVLGNLGK 139
F L+ LE L L +T+I+ F L++L+TL+L N + I D + L
Sbjct: 327 ESAFVGLSLLERLNLGDNRVTHIADGVFRFLSNLQTLDLRNNDISWAIEDASEAFSGLKS 386
Query: 140 LDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLD---VATTLGQNLVHLDSLDLS 196
L L L+ + I ++ F L L+L N ++ + + T + LV S L
Sbjct: 387 LTKLILQGNRIKSVTQKAFIGLESLEYLDLNNNAIMSIQENAFSQTHLKGLVLNTSSLLC 446
Query: 197 NCHLKGPLS---EDAF---VNATKLRTLYLSGNPLSAADLS--VA---LKPLTKLH 241
+CHLK L ++ F VN + +L+G + DL V LKP + H
Sbjct: 447 DCHLKWLLQWLVDNNFHHSVNVSCAHPEWLAGQSILNVDLKDFVCDDFLKPQIRTH 502
Score = 45 (20.9 bits), Expect = 3.8e-15, Sum P(2) = 3.8e-15
Identities = 24/91 (26%), Positives = 33/91 (36%)
Query: 532 CDCNIADMWEWATREKGDIGVLVGSTTPTEIGFGASRKK---KGLVCYFDIFTTPT-RKR 587
CDC++ + +W V V P + G S K VC D F P R
Sbjct: 446 CDCHLKWLLQWLVDNNFHHSVNVSCAHPEWLA-GQSILNVDLKDFVC--DDFLKPQIRTH 502
Query: 588 PGREL-FASTNKTWA-RYVKEADCPSSKLFR 616
P + N T V +D P S ++R
Sbjct: 503 PESTIALRGVNVTLTCTAVSSSDSPMSTIWR 533
>UNIPROTKB|F1MLX5 [details] [associations]
symbol:LGR4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090190 "positive regulation of branching involved in
ureteric bud morphogenesis" evidence=IEA] [GO:0072282 "metanephric
nephron tubule morphogenesis" evidence=IEA] [GO:0072224
"metanephric glomerulus development" evidence=IEA] [GO:0072202
"cell differentiation involved in metanephros development"
evidence=IEA] [GO:0061290 "canonical Wnt receptor signaling pathway
involved in metanephric kidney development" evidence=IEA]
[GO:0050673 "epithelial cell proliferation" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0030539 "male genitalia
development" evidence=IEA] [GO:0016500 "protein-hormone receptor
activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002131 InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237
PRINTS:PR00373 PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021
GO:GO:0045892 GO:GO:0045893 InterPro:IPR003591 SMART:SM00369
GO:GO:0030539 GO:GO:0090190 GO:GO:0050673 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0016500
GeneTree:ENSGT00650000092962 GO:GO:0061290 GO:GO:0072282
OMA:DGYWSDC GO:GO:0072202 GO:GO:0072224 EMBL:DAAA02041144
IPI:IPI00713357 Ensembl:ENSBTAT00000003370 Uniprot:F1MLX5
Length = 1034
Score = 228 (85.3 bits), Expect = 3.9e-15, P = 3.9e-15
Identities = 91/344 (26%), Positives = 161/344 (46%)
Query: 19 LITINLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLR 77
L ++ L+AN I V E +F L +L++ + +L+++ +NL TL L L+ N +
Sbjct: 214 LQSLRLDANHITSVPEDSFEGLTQLRHLWLDDNSLTEVPVHPLSNLPTLQALTLALNKIS 273
Query: 78 IIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNL 137
I F L+SL L L+ + + FD L++L+TL+L+ N L ++ + L
Sbjct: 274 SIPDFAFTNLSSLVVLHLHNNKIKSLGQHCFDGLDNLETLDLNYNNLG---EFPQAIKAL 330
Query: 138 GKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSN 197
L L + IS +PD F N L+ ++L +N L V + NL L SL +
Sbjct: 331 PSLKELLFHSNSISVIPDGAFDGNPLLKTIHLYDNPLSF--VGNSAFHNLSELHSLVI-- 386
Query: 198 CHLKGPLSEDAFVNAT---KLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLP 254
+G F N T +L +L L+G +S+ ++ + +L L L + LP
Sbjct: 387 ---RGASMVQRFPNLTGTVRLESLTLTGTKISSISNNLCQEQ-KRLRTLDLSYNSIKDLP 442
Query: 255 ANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKT 314
+ F+ L+E+ + N + L SL+ LD+ + + I F K+ S+
Sbjct: 443 S--FNGCHALEEISLQRNQIHQIKEDTFQGLTSLKILDLSRNLIHEIDDRAFAKLGSITN 500
Query: 315 LILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENY 358
L +S N+L + + + L L+ L+L G +L E + +++
Sbjct: 501 LDVSFNELTSFPT---EGLNGLNQLKL--VGNFKLKEALAAKDF 539
Score = 222 (83.2 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 103/361 (28%), Positives = 163/361 (45%)
Query: 19 LITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRI 78
L+ I++N N Q E AF L L + LS I+P+ + L L L L N L+
Sbjct: 144 LLDISMN-NITQLPEDAFKNFPFLEELRLAGNDLSFIHPKALSGLKELKVLTLQNNQLKT 202
Query: 79 IEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLG 138
+ L+SL+ L L+ ++T + +F+ L L+ L L N L + + L NL
Sbjct: 203 VPSEAIRGLSSLQSLRLDANHITSVPEDSFEGLTQLRHLWLDDNSL-TEVP-VHPLSNLP 260
Query: 139 KLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNC 198
L L L + IS++PD F N + L L+L N++ L G L +L++LDL+
Sbjct: 261 TLQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIKSLGQHCFDG--LDNLETLDLNYN 318
Query: 199 HLKGPLSEDAFVNATKLRTLYLSGNPLSAA-DLSVALKPLTKLHRLSLRNCGLSRLPANT 257
+L G + A L+ L N +S D + PL K + L + LS + +
Sbjct: 319 NL-GEFPQ-AIKALPSLKELLFHSNSISVIPDGAFDGNPLLKT--IHLYDNPLSFVGNSA 374
Query: 258 FHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLIL 317
FH + L L I ++ F L + LE L + + + IS + + L+TL L
Sbjct: 375 FHNLSELHSLVIRGASMVQRFPNLTGTVR-LESLTLTGTKISSISNNLCQEQKRLRTLDL 433
Query: 318 SGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLP 377
S N ++ L S F L + L + ++ E F + T L+ L LS N +H +
Sbjct: 434 SYNSIKDLPS--FNGCHALEEISLQRNQIHQIKEDTF-QGLT--SLKILDLSRNLIHEID 488
Query: 378 D 378
D
Sbjct: 489 D 489
Score = 218 (81.8 bits), Expect = 4.7e-14, P = 4.7e-14
Identities = 91/333 (27%), Positives = 146/333 (43%)
Query: 52 LSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNL 111
++++ F N L +L L+GN L I P L L+ L L L + A L
Sbjct: 152 ITQLPEDAFKNFPFLEELRLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAIRGL 211
Query: 112 NHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAE 171
+ L++L L N + S + + L +L L L + ++ +P + +N L+ L LA
Sbjct: 212 SSLQSLRLDANHITSVPEDSFE--GLTQLRHLWLDDNSLTEVPVHPLSNLPTLQALTLAL 269
Query: 172 NELIDL-DVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADL 230
N++ + D A T NL L L L N +K L + F L TL L+ N L +
Sbjct: 270 NKISSIPDFAFT---NLSSLVVLHLHNNKIKS-LGQHCFDGLDNLETLDLNYNNLG--EF 323
Query: 231 SVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEH 290
A+K L L L + +S +P F L+ + + NPL + L L
Sbjct: 324 PQAIKALPSLKELLFHSNSISVIPDGAFDGNPLLKTIHLYDNPLSFVGNSAFHNLSELHS 383
Query: 291 LDM-GYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRL 349
L + G S +QR T L++L L+G K+ ++ + L Q L L+L+ + L
Sbjct: 384 LVIRGASMVQRFPNLT--GTVRLESLTLTGTKISSISNNLCQEQKRLRTLDLSYNSIKDL 441
Query: 350 NETVFHENYTYPDLEELRLSGNPLHVLPDSTKQ 382
F+ + LEE+ L N +H + + T Q
Sbjct: 442 PS--FNGCHA---LEEISLQRNQIHQIKEDTFQ 469
Score = 218 (81.8 bits), Expect = 4.7e-14, P = 4.7e-14
Identities = 86/340 (25%), Positives = 149/340 (43%)
Query: 17 PGLITINLNANPIQPVEGAFLVA-RSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNP 75
P L + L N + + L + L L +Q L + + L++L L L N
Sbjct: 164 PFLEELRLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAIRGLSSLQSLRLDANH 223
Query: 76 LRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLG 135
+ + F+ LT L +L L+ +LT + NL L+ L L+ NK+ S D+
Sbjct: 224 ITSVPEDSFEGLTQLRHLWLDDNSLTEVPVHPLSNLPTLQALTLALNKISSIPDFAFT-- 281
Query: 136 NLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDL 195
NL L L L + I +L + F L L+L N L + A +L L L
Sbjct: 282 NLSSLVVLHLHNNKIKSLGQHCFDGLDNLETLDLNYNNLGEFPQAIKALPSLKEL----L 337
Query: 196 SNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGL-SRLP 254
+ + + + AF L+T++L NPLS S A L++LH L +R + R P
Sbjct: 338 FHSNSISVIPDGAFDGNPLLKTIHLYDNPLSFVGNS-AFHNLSELHSLVIRGASMVQRFP 396
Query: 255 ANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKT 314
T L+ L ++ + L + L LD+ Y++++ + +F +L+
Sbjct: 397 NLT--GTVRLESLTLTGTKISSISNNLCQEQKRLRTLDLSYNSIKDLP--SFNGCHALEE 452
Query: 315 LILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVF 354
+ L N++ ++ FQ LT L +L+L+ + +++ F
Sbjct: 453 ISLQRNQIHQIKEDTFQGLTSLKILDLSRNLIHEIDDRAF 492
Score = 167 (63.8 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 60/236 (25%), Positives = 106/236 (44%)
Query: 143 LDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKG 202
+D G++ +P+ + A + + L+++ N + L +N L+ L L+ L
Sbjct: 124 VDCSGKGLTAVPEGLSA---FTQLLDISMNNITQLPEDAF--KNFPFLEELRLAGNDLSF 178
Query: 203 PLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFT 262
+ A +L+ L L N L S A++ L+ L L L ++ +P ++F T
Sbjct: 179 -IHPKALSGLKELKVLTLQNNQLKTVP-SEAIRGLSSLQSLRLDANHITSVPEDSFEGLT 236
Query: 263 CLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKL 322
L+ L + N L + LS L +L+ L + + + I F ++SL L L NK+
Sbjct: 237 QLRHLWLDDNSLTEVPVHPLSNLPTLQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKI 296
Query: 323 ETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPD 378
++L F L +L L+LN L + + P L+EL N + V+PD
Sbjct: 297 KSLGQHCFDGLDNLETLDLNYNNLGEFPQAI----KALPSLKELLFHSNSISVIPD 348
Score = 167 (63.8 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 83/311 (26%), Positives = 133/311 (42%)
Query: 68 KLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSH 127
++D SG L + G+ T L + +N N+T + AF N L+ L L+ N L S
Sbjct: 123 RVDCSGKGLTAVPEGL-SAFTQLLDISMN--NITQLPEDAFKNFPFLEELRLAGNDL-SF 178
Query: 128 IDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLG-QN 186
I L L +L L L+ + + +P + L++L L N + + + G
Sbjct: 179 IH-PKALSGLKELKVLTLQNNQLKTVPSEAIRGLSSLQSLRLDANHITSVPEDSFEGLTQ 237
Query: 187 LVHL--DSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLS 244
L HL D L+ + PLS N L+ L L+ N +S+ A L+ L L
Sbjct: 238 LRHLWLDDNSLTEVPVH-PLS-----NLPTLQALTLALNKISSIP-DFAFTNLSSLVVLH 290
Query: 245 LRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRS 304
L N + L + F L+ LD+++N L + F + L SL+ L +++ I
Sbjct: 291 LHNNKIKSLGQHCFDGLDNLETLDLNYNNLGE-FPQAIKALPSLKELLFHSNSISVIPDG 349
Query: 305 TFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTR----LNETVFHENYTY 360
F LKT+ L N L + + F NL+ L L + + + L TV E+ T
Sbjct: 350 AFDGNPLLKTIHLYDNPLSFVGNSAFHNLSELHSLVIRGASMVQRFPNLTGTVRLESLTL 409
Query: 361 PDLEELRLSGN 371
+ +S N
Sbjct: 410 TGTKISSISNN 420
Score = 140 (54.3 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 63/235 (26%), Positives = 102/235 (43%)
Query: 216 RTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLI 275
R + SG L+A + L T+L +S+ N +++LP + F F L+EL ++ N L
Sbjct: 122 RRVDCSGKGLTA--VPEGLSAFTQLLDISMNN--ITQLPEDAFKNFPFLEELRLAGNDLS 177
Query: 276 DAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTH 335
LS L+ L+ L + + L+ + ++SL++L L N + ++ F+ LT
Sbjct: 178 FIHPKALSGLKELKVLTLQNNQLKTVPSEAIRGLSSLQSLRLDANHITSVPEDSFEGLTQ 237
Query: 336 LSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKN 395
L L L++ LT E H P L+ L L+ N + +PD + + N
Sbjct: 238 LRHLWLDDNSLT---EVPVHPLSNLPTLQALTLALNKISSIPDFAFTNLSSLVVLHLHNN 294
Query: 396 ---------FDFLVILFIL-----NETVFHENY-TYPDLEELRLSGNPLHVLPTG 435
FD L L L N F + P L+EL N + V+P G
Sbjct: 295 KIKSLGQHCFDGLDNLETLDLNYNNLGEFPQAIKALPSLKELLFHSNSISVIPDG 349
>WB|WBGene00008093 [details] [associations]
symbol:lron-1 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GeneTree:ENSGT00700000104056 eggNOG:KOG0619
EMBL:Z79598 RefSeq:NP_510424.4 ProteinModelPortal:Q93377 SMR:Q93377
EnsemblMetazoa:C44H4.1 GeneID:181553 KEGG:cel:CELE_C44H4.1
UCSC:C44H4.1 CTD:181553 WormBase:C44H4.1 HOGENOM:HOG000018355
InParanoid:Q93377 OMA:TDSKLPH NextBio:914416 Uniprot:Q93377
Length = 607
Score = 232 (86.7 bits), Expect = 4.2e-15, Sum P(2) = 4.2e-15
Identities = 102/384 (26%), Positives = 176/384 (45%)
Query: 15 DNPGLI-TINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFT-NL-TTLNKLDL 71
++P I ++ ++ PI+ + G + L+++ L +P FT NL +L +L++
Sbjct: 56 NSPQAIDSLTISNTPIEKMPGYAFQGFQIKKLFLRNNGLRSFHPNTFTGNLENSLEELEI 115
Query: 72 SGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAF---DNLNHLKTLELSQNKLKSHI 128
GN + I L L+ L L + Y+ +AF + + L L+LS N L + I
Sbjct: 116 RGNYIDGIPQSGVSILKQLKILSLPDNLIEYVQDNAFLSYHSRDSLLKLDLSANNLTA-I 174
Query: 129 DWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLV 188
T +LG L L L L ++ +S +P N L +L+L N + + + NL
Sbjct: 175 HPTGLLG-LENLSQLSLDKNLLSEIPSQALENIPSLEDLSLGVNRIHTISRNSLPLPNLK 233
Query: 189 HLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSL-RN 247
L SL+++ L + D+F L LYL N L++ D S+ L + L LS+ N
Sbjct: 234 SL-SLEVNQIRL---IPSDSFSETPLLSYLYLGNNLLTSIDASMFLH-IGGLKVLSMSNN 288
Query: 248 CGLSRLPAN---TFHRFT-CLQELDISHNP------LIDAFTALLSP--LESLEHLD--- 292
++ + AN + +F C+ L H P L D + + P L+ ++H+
Sbjct: 289 KDITSIQANGKLSVQQFKLCICILAFQHAPSLIRLELFDCSISRIEPKSLQKVQHIQVIL 348
Query: 293 MGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNET 352
+ + + RIS TF + L L LSGN + ++ F L L+ L+L++ L L
Sbjct: 349 LSRNQITRISHDTFSNLPELSELDLSGNSINAVDDFAFSQLPMLTSLDLSSNRLESLPSN 408
Query: 353 VFHENY----TYPDLEELRLSGNP 372
V +++ T P +L + NP
Sbjct: 409 VIYDSLMQKKTSPVQRKLSIQNNP 432
Score = 190 (71.9 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 83/325 (25%), Positives = 144/325 (44%)
Query: 13 NLDNPGLITINLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNL---TTLNK 68
NL+N L + + N I + + + + L L + + + + F + +L K
Sbjct: 105 NLEN-SLEELEIRGNYIDGIPQSGVSILKQLKILSLPDNLIEYVQDNAFLSYHSRDSLLK 163
Query: 69 LDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHI 128
LDLS N L I P L +L L L++ L+ I A +N+ L+ L L N++ +
Sbjct: 164 LDLSANNLTAIHPTGLLGLENLSQLSLDKNLLSEIPSQALENIPSLEDLSLGVNRIHTIS 223
Query: 129 DWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTL---GQ 185
+L L NL L +L++ Q I +P + F+ L L L N L +D + L G
Sbjct: 224 RNSLPLPNLKSL-SLEVNQ--IRLIPSDSFSETPLLSYLYLGNNLLTSIDASMFLHIGGL 280
Query: 186 NLVHL-DSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLS 244
++ + ++ D+++ G LS F KL L A + L RL
Sbjct: 281 KVLSMSNNKDITSIQANGKLSVQQF----KLCICIL------------AFQHAPSLIRLE 324
Query: 245 LRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRS 304
L +C +SR+ + + +Q + +S N + S L L LD+ +++ +
Sbjct: 325 LFDCSISRIEPKSLQKVQHIQVILLSRNQITRISHDTFSNLPELSELDLSGNSINAVDDF 384
Query: 305 TFLKMTSLKTLILSGNKLETLESGL 329
F ++ L +L LS N+LE+L S +
Sbjct: 385 AFSQLPMLTSLDLSSNRLESLPSNV 409
Score = 150 (57.9 bits), Expect = 7.5e-10, Sum P(3) = 7.5e-10
Identities = 93/344 (27%), Positives = 143/344 (41%)
Query: 66 LNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFD-NL-NHLKTLELSQNK 123
++ L +S P+ + PG ++ L L L P+ F NL N L+ LE+ N
Sbjct: 61 IDSLTISNTPIEKM-PGYAFQGFQIKKLFLRNNGLRSFHPNTFTGNLENSLEELEIRGNY 119
Query: 124 LKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFAN---NTWLRNLNLAENELIDLDVA 180
+ I + V L +L L L + I + DN F + L L+L+ N L +
Sbjct: 120 IDG-IPQSGV-SILKQLKILSLPDNLIEYVQDNAFLSYHSRDSLLKLDLSANNLTAIHPT 177
Query: 181 TTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKL 240
LG L +L L L +L + A N L L L N + +S PL L
Sbjct: 178 GLLG--LENLSQLSLDK-NLLSEIPSQALENIPSLEDLSLGVNRIHT--ISRNSLPLPNL 232
Query: 241 HRLSLRNCGLSRLPANTFHRFTCLQELDISHNPL--IDAFTAL----LSPLESLEHLDM- 293
LSL + +P+++F L L + +N L IDA L L L + D+
Sbjct: 233 KSLSLEVNQIRLIPSDSFSETPLLSYLYLGNNLLTSIDASMFLHIGGLKVLSMSNNKDIT 292
Query: 294 -----GYSNLQR----ISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNC 344
G ++Q+ I F SL L L + +E Q + H+ V+ L+
Sbjct: 293 SIQANGKLSVQQFKLCICILAFQHAPSLIRLELFDCSISRIEPKSLQKVQHIQVILLSRN 352
Query: 345 GLTRLNETVFHENYTYPDLEELRLSGNPLHVLPD-STKQYSMRT 387
+TR++ F P+L EL LSGN ++ + D + Q M T
Sbjct: 353 QITRISHDTFSN---LPELSELDLSGNSINAVDDFAFSQLPMLT 393
Score = 148 (57.2 bits), Expect = 1.2e-09, Sum P(3) = 1.2e-09
Identities = 77/306 (25%), Positives = 137/306 (44%)
Query: 139 KLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELID--LDVATTLGQNLV-HLDSLDL 195
++ L LR +G+ + N F N L N +L E E+ +D G +++ L L L
Sbjct: 83 QIKKLFLRNNGLRSFHPNTFTGN--LEN-SLEELEIRGNYIDGIPQSGVSILKQLKILSL 139
Query: 196 SNCHLKGPLSEDAFVN---ATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSR 252
+ +L + ++AF++ L L LS N L+A L L L +LSL LS
Sbjct: 140 PD-NLIEYVQDNAFLSYHSRDSLLKLDLSANNLTAIH-PTGLLGLENLSQLSLDKNLLSE 197
Query: 253 LPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSL 312
+P+ L++L + N I + PL +L+ L + + ++ I +F + L
Sbjct: 198 IPSQALENIPSLEDLSLGVNR-IHTISRNSLPLPNLKSLSLEVNQIRLIPSDSFSETPLL 256
Query: 313 KTLILSGNKLETLESGLFQNLTHLSVLEL-NNCGLTRL--NETVFHENYTYPDLEELRLS 369
L L N L ++++ +F ++ L VL + NN +T + N + + + + L
Sbjct: 257 SYLYLGNNLLTSIDASMFLHIGGLKVLSMSNNKDITSIQANGKLSVQQFKLC-ICILAFQ 315
Query: 370 GNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNET--VFHENYT-YPDLEELRLSG 426
P + + R P + K VIL N+ + H+ ++ P+L EL LSG
Sbjct: 316 HAPSLIRLELFDCSISRIEPKSLQKVQHIQVILLSRNQITRISHDTFSNLPELSELDLSG 375
Query: 427 NPLHVL 432
N ++ +
Sbjct: 376 NSINAV 381
Score = 96 (38.9 bits), Expect = 0.00043, Sum P(3) = 0.00043
Identities = 55/240 (22%), Positives = 103/240 (42%)
Query: 204 LSEDAFVNATKLRTLYLS---GNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHR 260
L E +T+ + ++ G+ L A S++ P + L++ N + ++P F
Sbjct: 23 LQEPCTCTSTRYEAVSINCDGGSSLDAVLESLSNSPQA-IDSLTISNTPIEKMPGYAFQG 81
Query: 261 FTCLQELDISHNPLI----DAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLI 316
F +++L + +N L + FT L SLE L++ + + I +S + LK L
Sbjct: 82 FQ-IKKLFLRNNGLRSFHPNTFTGNLE--NSLEELEIRGNYIDGIPQSGVSILKQLKILS 138
Query: 317 LSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHEN--YTYPDLEELRLSGNPLH 374
L N +E ++ F L++ S L L+ N T H +L +L L N L
Sbjct: 139 LPDNLIEYVQDNAF--LSYHSRDSLLKLDLSANNLTAIHPTGLLGLENLSQLSLDKNLLS 196
Query: 375 VLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTYPDLEELRLSGNPLHVLPT 434
+P ++ IP+ + L + T+ + P+L+ L L N + ++P+
Sbjct: 197 EIPSQ----ALENIPS-----LEDLSLGVNRIHTISRNSLPLPNLKSLSLEVNQIRLIPS 247
Score = 78 (32.5 bits), Expect = 7.5e-10, Sum P(3) = 7.5e-10
Identities = 19/112 (16%), Positives = 48/112 (42%)
Query: 454 KIDYLPPNVFNNTRNITSLNLANNNLSMTSELSF-QFXXXXXXXXXXXXXXXXXTHISPT 512
+I + + F+N ++ L+L+ N+++ + +F Q +++
Sbjct: 353 QITRISHDTFSNLPELSELDLSGNSINAVDDFAFSQLPMLTSLDLSSNRLESLPSNVIYD 412
Query: 513 VLRHNRAIT---SIKLVGNPWKCDCNIADMWEWATREKGDIGVLVGSTTPTE 561
L + + + NPW+CD ++ + +W R+ GD+ ++ P +
Sbjct: 413 SLMQKKTSPVQRKLSIQNNPWRCDKDLMWLRKWL-RDNGDVTTAASNSPPAK 463
Score = 38 (18.4 bits), Expect = 4.2e-15, Sum P(2) = 4.2e-15
Identities = 8/43 (18%), Positives = 22/43 (51%)
Query: 649 GLI-SVGVIILSAMVYFSFYARHLYRTKQQRIRRNTFKSPCAS 690
GLI + +++ + + + R ++ + + + + N F S +S
Sbjct: 526 GLILGIVLVVFVSCIILGYLMRFIFLSYEAKTKPNVFGSTISS 568
>UNIPROTKB|G3N218 [details] [associations]
symbol:G3N218 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007601 "visual perception" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] GO:GO:0007601 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005622
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 OMA:NISFITP
GeneTree:ENSGT00690000101803 EMBL:DAAA02073610
Ensembl:ENSBTAT00000066321 Uniprot:G3N218
Length = 478
Score = 207 (77.9 bits), Expect = 4.8e-15, Sum P(2) = 4.8e-15
Identities = 74/263 (28%), Positives = 117/263 (44%)
Query: 69 LDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHI 128
+DL N LR + F L SL L L NL++I+P AF L L L L+ N ++
Sbjct: 63 IDLDRNGLRFLGERAFGTLPSLRRLSLRHNNLSFITPGAFKGLPRLAELSLAHNGDLRYL 122
Query: 129 DWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLV 188
LG+L LDL + ++P+ + A LR L +N + V L + L
Sbjct: 123 H-ARTFTALGRLRRLDLTVCRLFSVPERLLAELPALRELAAFDN--LFRRVPGAL-RGLA 178
Query: 189 HLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNC 248
+L L ++ ++ + + +LR+L L GN + A A + + L L L +
Sbjct: 179 NLTHAHLERSRIEA-VASSSLLGLRRLRSLSLQGNRVRAVH-GGAFRDCSALEHLLLNDN 236
Query: 249 GLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLK 308
L+ LPA+ F L+ L++ N L A + L LE L + + + + F
Sbjct: 237 LLAALPADAFLGLRRLRTLNLGGNALGRVVRAWFAELAELELLYLDRNRIAFVEEGAFQN 296
Query: 309 MTSLKTLILSGNKLETLESGLFQ 331
++ L L L+GN L L FQ
Sbjct: 297 LSGLLALHLNGNHLTVLAWAAFQ 319
Score = 157 (60.3 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 82/281 (29%), Positives = 118/281 (41%)
Query: 95 LNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSG-ISNL 153
L+R L ++ AF L L+ L L N L S I G L +L L L +G + L
Sbjct: 65 LDRNGLRFLGERAFGTLPSLRRLSLRHNNL-SFITPGAFKG-LPRLAELSLAHNGDLRYL 122
Query: 154 PDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLD-LSNCHLKGPLSEDAFVNA 212
F LR L+L L V L L L L N + P + N
Sbjct: 123 HARTFTALGRLRRLDLTVCRLFS--VPERLLAELPALRELAAFDNLFRRVPGALRGLANL 180
Query: 213 TKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHN 272
T +L + + A S +L L +L LSL+ + + F + L+ L ++ N
Sbjct: 181 THA---HLERSRIEAV-ASSSLLGLRRLRSLSLQGNRVRAVHGGAFRDCSALEHLLLNDN 236
Query: 273 PLIDAFTA-LLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQ 331
L+ A A L L L++G + L R+ R+ F ++ L+ L L N++ +E G FQ
Sbjct: 237 -LLAALPADAFLGLRRLRTLNLGGNALGRVVRAWFAELAELELLYLDRNRIAFVEEGAFQ 295
Query: 332 NLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNP 372
NL+ L L LN LT L F + L L L NP
Sbjct: 296 NLSGLLALHLNGNHLTVLAWAAFQPGFF---LGRLFLFRNP 333
Score = 136 (52.9 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 44/159 (27%), Positives = 71/159 (44%)
Query: 17 PGLITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPL 76
P L + N + V GA +L + +++ + + L L L L GN +
Sbjct: 155 PALRELAAFDNLFRRVPGALRGLANLTHAHLERSRIEAVASSSLLGLRRLRSLSLQGNRV 214
Query: 77 RIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHID-WTLVLG 135
R + G F ++LE+L+LN L + AF L L+TL L N L + W
Sbjct: 215 RAVHGGAFRDCSALEHLLLNDNLLAALPADAFLGLRRLRTLNLGGNALGRVVRAW---FA 271
Query: 136 NLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENEL 174
L +L+ L L ++ I+ + + F N + L L+L N L
Sbjct: 272 ELAELELLYLDRNRIAFVEEGAFQNLSGLLALHLNGNHL 310
Score = 128 (50.1 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 71/266 (26%), Positives = 107/266 (40%)
Query: 21 TINLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGN-PLRI 78
+I+L+ N ++ + E AF SL L ++ LS I P F L L +L L+ N LR
Sbjct: 62 SIDLDRNGLRFLGERAFGTLPSLRRLSLRHNNLSFITPGAFKGLPRLAELSLAHNGDLRY 121
Query: 79 IEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLG 138
+ F L L L L C L + L L+ L N + + L L
Sbjct: 122 LHARTFTALGRLRRLDLTVCRLFSVPERLLAELPALRELAAFDNLFR-RVPGAL--RGLA 178
Query: 139 KLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNC 198
L L +S I + + LR+L+L N + + ++ L+ L L N
Sbjct: 179 NLTHAHLERSRIEAVASSSLLGLRRLRSLSLQGNRVRAVHGGAF--RDCSALEHL-LLND 235
Query: 199 HLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTF 258
+L L DAF+ +LRTL L GN L + L +L L L ++ + F
Sbjct: 236 NLLAALPADAFLGLRRLRTLNLGGNALGRV-VRAWFAELAELELLYLDRNRIAFVEEGAF 294
Query: 259 HRFTCLQELDISHNPLIDAFTALLSP 284
+ L L ++ N L A P
Sbjct: 295 QNLSGLLALHLNGNHLTVLAWAAFQP 320
Score = 113 (44.8 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 71/263 (26%), Positives = 106/263 (40%)
Query: 60 FTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLML-NRCNLTYISPSAFDNLNHLKTLE 118
F L +L +L L N L I PG F L L L L + +L Y+ F L L+ L+
Sbjct: 78 FGTLPSLRRLSLRHNNLSFITPGAFKGLPRLAELSLAHNGDLRYLHARTFTALGRLRRLD 137
Query: 119 LSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLD 178
L+ +L S + +L L L L + NL V L NL A E ++
Sbjct: 138 LTVCRLFSVPE--RLLAELPALREL----AAFDNLFRRVPGALRGLANLTHAHLERSRIE 191
Query: 179 -VATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPL 237
VA++ L L SL L ++ + AF + + L L L+ N L+A L L
Sbjct: 192 AVASSSLLGLRRLRSLSLQGNRVRA-VHGGAFRDCSALEHLLLNDNLLAALPADAFLG-L 249
Query: 238 TKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSN 297
+L L+L L R+ F L+ L + N + L L L + ++
Sbjct: 250 RRLRTLNLGGNALGRVVRAWFAELAELELLYLDRNRIAFVEEGAFQNLSGLLALHLNGNH 309
Query: 298 LQRISRSTFLKMTSLKTLILSGN 320
L ++ + F L L L N
Sbjct: 310 LTVLAWAAFQPGFFLGRLFLFRN 332
Score = 60 (26.2 bits), Expect = 4.8e-15, Sum P(2) = 4.8e-15
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 525 LVGNPWKCDCNIADMWEW 542
L NPW+CDC + + +W
Sbjct: 329 LFRNPWRCDCRLEWLRDW 346
>UNIPROTKB|O94991 [details] [associations]
symbol:SLITRK5 "SLIT and NTRK-like protein 5" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0016021 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 EMBL:CH471085
GO:GO:0007409 InterPro:IPR000372 SMART:SM00013 HOGENOM:HOG000290667
HOVERGEN:HBG056407 eggNOG:NOG147171 EMBL:AB020725 EMBL:AK024251
EMBL:AL603883 EMBL:BC098106 EMBL:BC103509 IPI:IPI00016679
RefSeq:NP_056382.1 UniGene:Hs.591208 ProteinModelPortal:O94991
SMR:O94991 STRING:O94991 PhosphoSite:O94991 PaxDb:O94991
PRIDE:O94991 Ensembl:ENST00000325089 GeneID:26050 KEGG:hsa:26050
UCSC:uc001vln.3 CTD:26050 GeneCards:GC13P088324 HGNC:HGNC:20295
HPA:HPA013843 MIM:609680 neXtProt:NX_O94991 PharmGKB:PA134885524
InParanoid:O94991 OMA:HHRGPAL OrthoDB:EOG4X97GH PhylomeDB:O94991
GenomeRNAi:26050 NextBio:47908 ArrayExpress:O94991 Bgee:O94991
CleanEx:HS_SLITRK5 Genevestigator:O94991 GermOnline:ENSG00000165300
Uniprot:O94991
Length = 958
Score = 152 (58.6 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 108/438 (24%), Positives = 185/438 (42%)
Query: 18 GLITINLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPL 76
G ++L +N IQ +E GAF R L L++ L + F L L L + N +
Sbjct: 106 GASILHLGSNVIQDIETGAFHGLRGLRRLHLNNNKLELLRDDTFLGLENLEYLQVDYNYI 165
Query: 77 RIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGN 136
+IEP F L L+ L+LN NL P+ L L+L N+LK + + +L +
Sbjct: 166 SVIEPNAFGKLHLLQVLILND-NLLSSLPNNLFRFVPLTHLDLRGNRLKL-LPYVGLLQH 223
Query: 137 LGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELI-DLDVATTLGQNLVHLDSLDL 195
+ K+ L L ++ N + + WL +++ + L+ D+ T + LD +
Sbjct: 224 MDKVVELQLEENPW-NCSCELISLKDWLDSISYSA--LVGDVVCETPFRLHGRDLDEVSK 280
Query: 196 SNCHLKGPLSEDAFVNATKLRTL-YLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLP 254
+ +S+ T L T YL P S SVA + +++ L+ +R P
Sbjct: 281 QELCPRRLISDYEMRPQTPLSTTGYLHTTPASVN--SVATSS-SAVYKPPLKPPKGTRQP 337
Query: 255 ANTFHRFTCLQ---ELDIS-HNPLIDAFTALLSPLE-------SLEHLDMGYS-NLQ--R 300
R T Q +L S + P I T PLE +L+ D+G + N Q +
Sbjct: 338 NKPRVRPTSRQPSKDLGYSNYGPSIAYQTKSPVPLECPTACSCNLQISDLGLNVNCQERK 397
Query: 301 ISRSTFL--KMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENY 358
I L K + K + L+ N + + F T L +L L N ++ + + F +
Sbjct: 398 IESIAELQPKPYNPKKMYLTENYIAVVRRTDFLEATGLDLLHLGNNRISMIQDRAFGD-- 455
Query: 359 TYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYT-YP 417
+L L L+GN + L Y ++++ +L + + L + + P
Sbjct: 456 -LTNLRRLYLNGNRIERLSPELF-YGLQSL--------QYLFLQYNLIREIQSGTFDPVP 505
Query: 418 DLEELRLSGNPLHVLPTG 435
+L+ L L+ N L +P+G
Sbjct: 506 NLQLLFLNNNLLQAMPSG 523
Score = 136 (52.9 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 48/158 (30%), Positives = 74/158 (46%)
Query: 14 LDNPGLITINLNANPIQPVEG-AFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLS 72
L+ GL ++L N I ++ AF +L LY+ + +++P+ F L +L L L
Sbjct: 430 LEATGLDLLHLGNNRISMIQDRAFGDLTNLRRLYLNGNRIERLSPELFYGLQSLQYLFLQ 489
Query: 73 GNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSA-FDNLNHLKTLELSQNKLKSHIDWT 131
N +R I+ G FDP+ +L+ L LN NL PS F L L+ L L N S + +
Sbjct: 490 YNLIREIQSGTFDPVPNLQLLFLNN-NLLQAMPSGVFSGLTLLR-LNLRSNHFTS-LPVS 546
Query: 132 LVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNL 169
VL L L +DL + D + W+ L +
Sbjct: 547 GVLDQLKSLIQIDLHDNPWDCTCD-IVGMKLWVEQLKV 583
Score = 135 (52.6 bits), Expect = 7.9e-09, Sum P(2) = 7.9e-09
Identities = 45/152 (29%), Positives = 69/152 (45%)
Query: 45 LYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYIS 104
+Y+ E ++ + F T L+ L L N + +I+ F LT+L L LN + +S
Sbjct: 414 MYLTENYIAVVRRTDFLEATGLDLLHLGNNRISMIQDRAFGDLTNLRRLYLNGNRIERLS 473
Query: 105 PSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWL 164
P F L L+ L L N ++ T + L L L + + +P VF+ T L
Sbjct: 474 PELFYGLQSLQYLFLQYNLIREIQSGTF--DPVPNLQLLFLNNNLLQAMPSGVFSGLTLL 531
Query: 165 RNLNLAENELIDLDVATTLGQ--NLVHLDSLD 194
R LNL N L V+ L Q +L+ +D D
Sbjct: 532 R-LNLRSNHFTSLPVSGVLDQLKSLIQIDLHD 562
Score = 127 (49.8 bits), Expect = 1.9e-07, Sum P(3) = 1.9e-07
Identities = 47/167 (28%), Positives = 73/167 (43%)
Query: 230 LSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLE 289
LS P ++ L L L+RL N F +T L + N + D T L L
Sbjct: 73 LSEISPPRFPIYHLLLSGNLLNRLYPNEFVNYTGASILHLGSNVIQDIETGAFHGLRGLR 132
Query: 290 HLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRL 349
L + + L+ + TFL + +L+ L + N + +E F L L VL LN+ L+ L
Sbjct: 133 RLHLNNNKLELLRDDTFLGLENLEYLQVDYNYISVIEPNAFGKLHLLQVLILNDNLLSSL 192
Query: 350 NETVFHENYTYPDLEELRLSGNPLHVLPD-STKQYSMRTIPTQIWKN 395
+F + L L L GN L +LP Q+ + + Q+ +N
Sbjct: 193 PNNLFR----FVPLTHLDLRGNRLKLLPYVGLLQHMDKVVELQLEEN 235
Score = 124 (48.7 bits), Expect = 5.2e-15, Sum P(3) = 5.2e-15
Identities = 44/160 (27%), Positives = 73/160 (45%)
Query: 15 DNPGLITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGN 74
+ G++T++ I + + +L + L+++ P F N T + L L N
Sbjct: 56 EKDGILTVSCENRGIISLSEISPPRFPIYHLLLSGNLLNRLYPNEFVNYTGASILHLGSN 115
Query: 75 PLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVL 134
++ IE G F L L L LN L + F L +L+ L++ N + S I+
Sbjct: 116 VIQDIETGAFHGLRGLRRLHLNNNKLELLRDDTFLGLENLEYLQVDYNYI-SVIEPN-AF 173
Query: 135 GNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENEL 174
G L L L L + +S+LP+N+F L +L+L N L
Sbjct: 174 GKLHLLQVLILNDNLLSSLPNNLF-RFVPLTHLDLRGNRL 212
Score = 121 (47.7 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 39/119 (32%), Positives = 61/119 (51%)
Query: 36 FLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLML 95
FL A L L++ +S I + F +LT L +L L+GN + + P +F L SL+YL L
Sbjct: 429 FLEATGLDLLHLGNNRISMIQDRAFGDLTNLRRLYLNGNRIERLSPELFYGLQSLQYLFL 488
Query: 96 NRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLP 154
+ I FD + +L+ L L+ N L++ V L L L+LR + ++LP
Sbjct: 489 QYNLIREIQSGTFDPVPNLQLLFLNNNLLQAMPSG--VFSGLTLL-RLNLRSNHFTSLP 544
Score = 117 (46.2 bits), Expect = 5.2e-15, Sum P(3) = 5.2e-15
Identities = 39/134 (29%), Positives = 67/134 (50%)
Query: 216 RTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLI 275
+ +YL+ N ++ + L+ T L L L N +S + F T L+ L ++ N +
Sbjct: 412 KKMYLTENYIAVVRRTDFLEA-TGLDLLHLGNNRISMIQDRAFGDLTNLRRLYLNGNRIE 470
Query: 276 DAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTH 335
L L+SL++L + Y+ ++ I TF + +L+ L L+ N L+ + SG+F LT
Sbjct: 471 RLSPELFYGLQSLQYLFLQYNLIREIQSGTFDPVPNLQLLFLNNNLLQAMPSGVFSGLTL 530
Query: 336 LSVLELNNCGLTRL 349
L L L + T L
Sbjct: 531 LR-LNLRSNHFTSL 543
Score = 112 (44.5 bits), Expect = 1.7e-14, Sum P(3) = 1.7e-14
Identities = 39/136 (28%), Positives = 63/136 (46%)
Query: 209 FVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELD 268
F+ AT L L+L N +S A LT L RL L + RL F+ LQ L
Sbjct: 429 FLEATGLDLLHLGNNRISMIQ-DRAFGDLTNLRRLYLNGNRIERLSPELFYGLQSLQYLF 487
Query: 269 ISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLE-S 327
+ +N + + + P+ +L+ L + + LQ + F +T L+ L L N +L S
Sbjct: 488 LQYNLIREIQSGTFDPVPNLQLLFLNNNLLQAMPSGVFSGLTLLR-LNLRSNHFTSLPVS 546
Query: 328 GLFQNLTHLSVLELNN 343
G+ L L ++L++
Sbjct: 547 GVLDQLKSLIQIDLHD 562
Score = 110 (43.8 bits), Expect = 1.5e-13, Sum P(3) = 1.5e-13
Identities = 42/136 (30%), Positives = 64/136 (47%)
Query: 19 LITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRI 78
L++ NL N + P E S+L+L + I F L L +L L+ N L +
Sbjct: 87 LLSGNL-LNRLYPNEFVNYTGASILHLGSN--VIQDIETGAFHGLRGLRRLHLNNNKLEL 143
Query: 79 IEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLG 138
+ F L +LEYL ++ ++ I P+AF L+ L+ L L+ N L S + L
Sbjct: 144 LRDDTFLGLENLEYLQVDYNYISVIEPNAFGKLHLLQVLILNDNLLSSLPN---NLFRFV 200
Query: 139 KLDTLDLRQSGISNLP 154
L LDLR + + LP
Sbjct: 201 PLTHLDLRGNRLKLLP 216
Score = 102 (41.0 bits), Expect = 7.9e-05, Sum P(3) = 7.9e-05
Identities = 44/145 (30%), Positives = 66/145 (45%)
Query: 150 ISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAF 209
++ L N F N T L+L N + D++ G L L L L+N L+ L +D F
Sbjct: 93 LNRLYPNEFVNYTGASILHLGSNVIQDIETGAFHG--LRGLRRLHLNNNKLE-LLRDDTF 149
Query: 210 VNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDI 269
+ L L + N +S + + A L L L L + LS LP N F RF L LD+
Sbjct: 150 LGLENLEYLQVDYNYISVIEPN-AFGKLHLLQVLILNDNLLSSLPNNLF-RFVPLTHLDL 207
Query: 270 SHNPL-IDAFTALLSPLESLEHLDM 293
N L + + LL ++ + L +
Sbjct: 208 RGNRLKLLPYVGLLQHMDKVVELQL 232
Score = 90 (36.7 bits), Expect = 2.9e-12, Sum P(3) = 2.9e-12
Identities = 35/122 (28%), Positives = 53/122 (43%)
Query: 258 FHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLIL 317
F T L L + +N + L +L L + + ++R+S F + SL+ L L
Sbjct: 429 FLEATGLDLLHLGNNRISMIQDRAFGDLTNLRRLYLNGNRIERLSPELFYGLQSLQYLFL 488
Query: 318 SGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLP 377
N + ++SG F + +L +L LNN L + VF T L L L N LP
Sbjct: 489 QYNLIREIQSGTFDPVPNLQLLFLNNNLLQAMPSGVF-SGLT---LLRLNLRSNHFTSLP 544
Query: 378 DS 379
S
Sbjct: 545 VS 546
Score = 85 (35.0 bits), Expect = 5.2e-15, Sum P(3) = 5.2e-15
Identities = 27/79 (34%), Positives = 37/79 (46%)
Query: 513 VLRHNRAITSIKLVGNPWKCDCNIADMWEWATREKGDIGVLVGST---TPTEIGFGASRK 569
VL +++ I L NPW C C+I M W + K +GVLV P + R
Sbjct: 548 VLDQLKSLIQIDLHDNPWDCTCDIVGMKLWVEQLK--VGVLVDEVICKAPKKFAETDMRS 605
Query: 570 -KKGLVC--YFDIF-TTPT 584
K L+C Y D+ +TPT
Sbjct: 606 IKSELLCPDYSDVVVSTPT 624
Score = 74 (31.1 bits), Expect = 1.2e-10, Sum P(3) = 1.2e-10
Identities = 40/129 (31%), Positives = 63/129 (48%)
Query: 190 LDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVAL-KPLTKLHRLSLRNC 248
LD L L N + + + AF + T LR LYL+GN + LS L L L L L+
Sbjct: 435 LDLLHLGNNRIS-MIQDRAFGDLTNLRRLYLNGNRIER--LSPELFYGLQSLQYLFLQYN 491
Query: 249 GLSRLPANTFHRFTCLQELDISHNPLIDAF-TALLSPLESLEHLDMGYSNLQRISRSTFL 307
+ + + TF LQ L +++N L+ A + + S L +L L++ ++ + S L
Sbjct: 492 LIREIQSGTFDPVPNLQLLFLNNN-LLQAMPSGVFSGL-TLLRLNLRSNHFTSLPVSGVL 549
Query: 308 KMTSLKTLI 316
LK+LI
Sbjct: 550 DQ--LKSLI 556
Score = 39 (18.8 bits), Expect = 1.9e-07, Sum P(3) = 1.9e-07
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 463 FNNTRNITSLNLANNNLSMTSELSF 487
F + L+L NN +SM + +F
Sbjct: 429 FLEATGLDLLHLGNNRISMIQDRAF 453
>WB|WBGene00004854 [details] [associations]
symbol:slt-1 species:6239 "Caenorhabditis elegans"
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=ISS] [GO:0005102 "receptor binding"
evidence=ISS;IPI] [GO:0033563 "dorsal/ventral axon guidance"
evidence=IGI;IMP] [GO:0001764 "neuron migration" evidence=IMP]
[GO:0048843 "negative regulation of axon extension involved in axon
guidance" evidence=IGI] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0001764
GO:GO:0005576 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005102 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186
InterPro:IPR001791 SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 InterPro:IPR006207
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 HSSP:P00740
GO:GO:0033563 GeneTree:ENSGT00700000104083 EMBL:Z69792
GO:GO:0048843 EMBL:AL022270 PIR:D89711 PIR:T22025
RefSeq:NP_510437.2 ProteinModelPortal:G5EFX6 SMR:G5EFX6
EnsemblMetazoa:F40E10.4 GeneID:181562 KEGG:cel:CELE_F40E10.4
CTD:181562 WormBase:F40E10.4 OMA:KSISHIA NextBio:914450
Uniprot:G5EFX6
Length = 1410
Score = 219 (82.2 bits), Expect = 5.6e-14, P = 5.6e-14
Identities = 131/506 (25%), Positives = 217/506 (42%)
Query: 12 RNLDNPGLITINLNANPIQPVEG-AFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLD 70
+NL N L ++L+ N I ++ AFL +L L + ++ + F L +L L
Sbjct: 308 KNLKN--LTRLDLSKNIITEIQPKAFLGLHNLHTLVLYGNNITDLKSDTFEGLGSLQLLL 365
Query: 71 LSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKL--KSHI 128
L+ N L I G FD + L L L ++ IS F NL L TL L++N L ++
Sbjct: 366 LNANQLTCIRRGTFDHVPKLSMLSLYDNDIKSISEVTFQNLTSLSTLHLAKNPLICDCNL 425
Query: 129 DWTLVLGNLGK-LDTLD--------LRQSGISNLPDNVFANNTWLRNLNL-AENELIDLD 178
W + NL K ++T LR+ + LP N F +++ A++ ID
Sbjct: 426 QWLAQI-NLQKNIETSGARCEQPKRLRKKKFATLPPNKFKCKGSESFVSMYADSCFID-S 483
Query: 179 VATTLGQNLVHLDSLDLSNCHLKG-PLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPL 237
+ T Q + ++D + L P S F AT+L LSGN +S DL+ + L
Sbjct: 484 ICPT--QCDCYGTTVDCNKRGLNTIPTSIPRF--ATQL---LLSGNNISTVDLNSNIHVL 536
Query: 238 TKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSN 297
L L L N ++ + +F + + L+EL ++ N L + +L +LE LD+ +N
Sbjct: 537 ENLEVLDLSNNHITFINDKSFEKLSKLRELRLNDNKLHHFSSMVLDEQSNLEILDLSGNN 596
Query: 298 LQRISRSTFLKMTSLKTLILSGN------KLETLESGLFQNLTHLSVLELNNCGLTRL-- 349
+Q S F K T ++ + + GN ++ L S L N +H +++ C +
Sbjct: 597 IQCFSSIFFNKATRIREIKVIGNDLLCDCRILPLMSWLRSNSSHS--IDIPPCQQFQYSD 654
Query: 350 NETVFHENYTYPDLEELRLSGN---PLHVLPDSTKQYSMRTI---PTQI-WKNFDFLVIL 402
NE+ +P+ E N P D + S + + P++I + + +
Sbjct: 655 NESDKQRCAAFPE-ETCSDDSNLCPPKCSCLDRVVRCSNKNLTSFPSRIPFDTTELYLDA 713
Query: 403 FILNETVFHE-NYTYPDLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPN 461
+NE H+ N Y L +L LS N L L N K+ L P
Sbjct: 714 NYINEIPAHDLNRLY-SLTKLDLSHNRLISLE--NNTFSNLTRLSTLIISYNKLRCLQPL 770
Query: 462 VFNNTRNITSLNLANNNLSMTSELSF 487
FN + L+L N++S + +F
Sbjct: 771 AFNGLNALRILSLHGNDISFLPQSAF 796
Score = 153 (58.9 bits), Expect = 7.0e-14, Sum P(2) = 7.0e-14
Identities = 49/157 (31%), Positives = 76/157 (48%)
Query: 17 PGLITINLNANPIQPVEG-AFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNP 75
P I L N I + +F ++L L + + +++I P+ F L L+ L L GN
Sbjct: 287 PSTTEIRLEQNQISSIPSHSFKNLKNLTRLDLSKNIITEIQPKAFLGLHNLHTLVLYGNN 346
Query: 76 LRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLG 135
+ ++ F+ L SL+ L+LN LT I FD++ L L L N +KS + T
Sbjct: 347 ITDLKSDTFEGLGSLQLLLLNANQLTCIRRGTFDHVPKLSMLSLYDNDIKSISEVTFQ-- 404
Query: 136 NLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAEN 172
NL L TL L ++ + + D N WL +NL +N
Sbjct: 405 NLTSLSTLHLAKNPL--ICD---CNLQWLAQINLQKN 436
Score = 135 (52.6 bits), Expect = 5.3e-15, Sum P(3) = 5.3e-15
Identities = 41/140 (29%), Positives = 69/140 (49%)
Query: 234 LKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDM 293
L P T RL +S +P+++F L LD+S N + + L +L L +
Sbjct: 285 LPPSTTEIRLEQNQ--ISSIPSHSFKNLKNLTRLDLSKNIITEIQPKAFLGLHNLHTLVL 342
Query: 294 GYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETV 353
+N+ + TF + SL+ L+L+ N+L + G F ++ LS+L L + + ++E
Sbjct: 343 YGNNITDLKSDTFEGLGSLQLLLLNANQLTCIRRGTFDHVPKLSMLSLYDNDIKSISEVT 402
Query: 354 FHENYTYPDLEELRLSGNPL 373
F +N T L L L+ NPL
Sbjct: 403 F-QNLT--SLSTLHLAKNPL 419
Score = 134 (52.2 bits), Expect = 5.3e-15, Sum P(3) = 5.3e-15
Identities = 41/127 (32%), Positives = 68/127 (53%)
Query: 100 LTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFA 159
+T I P+ F +L +LK L+L N++ + + + +L L L L ++ I +LPDNVF
Sbjct: 56 ITKIGPNDFSSLMNLKALQLMDNQIVTIHNQSF--SSLVFLQKLRLSRNRIRHLPDNVFQ 113
Query: 160 NNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLY 219
NN L +L+L+EN++ + A G L+ L+L H+ L + + L L
Sbjct: 114 NNLKLTHLDLSENDITVVSDAQLQGPEF--LEVLNLDKNHIFC-LENNVISSWVSLEVLT 170
Query: 220 LSGNPLS 226
L+GN L+
Sbjct: 171 LNGNRLT 177
Score = 119 (46.9 bits), Expect = 7.0e-14, Sum P(2) = 7.0e-14
Identities = 29/97 (29%), Positives = 49/97 (50%)
Query: 250 LSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKM 309
++ +PA+ +R L +LD+SHN LI S L L L + Y+ L+ + F +
Sbjct: 716 INEIPAHDLNRLYSLTKLDLSHNRLISLENNTFSNLTRLSTLIISYNKLRCLQPLAFNGL 775
Query: 310 TSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGL 346
+L+ L L GN + L F NLT ++ + + + L
Sbjct: 776 NALRILSLHGNDISFLPQSAFSNLTSITHIAVGSNSL 812
Score = 114 (45.2 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 85/330 (25%), Positives = 128/330 (38%)
Query: 22 INLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIE 80
+ L+ N I+ + + F L +L + E ++ ++ L L+L N + +E
Sbjct: 97 LRLSRNRIRHLPDNVFQNNLKLTHLDLSENDITVVSDAQLQGPEFLEVLNLDKNHIFCLE 156
Query: 81 PGVFDPLTSLEYLMLNRCNLT-YISPS--AFDNLNHLKTLELSQNKLKSHIDWTLVLGNL 137
V SLE L LN LT + PS F L+ +L+ W
Sbjct: 157 NNVISSWVSLEVLTLNGNRLTTFEEPSNARFRQLDLFNNPWNCDCRLRWMRKWLEKAEGQ 216
Query: 138 GKL---DTLDLRQSGISNLPDNVF--ANNTWLRNLNLAEN-ELIDLDVATTLGQNLVHLD 191
K L+L+ S I L D + N R E E+ L T G + D
Sbjct: 217 NKTVCATPLNLQGSSIEILQDKFMTCSGNRKRRYKKTCETAEICPLPCTCT-GTTVDCRD 275
Query: 192 SLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLS 251
S L+ P S T++R L N +S+ S + K L L RL L ++
Sbjct: 276 S-GLTYVPTNLPPS------TTEIR---LEQNQISSIP-SHSFKNLKNLTRLDLSKNIIT 324
Query: 252 RLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTS 311
+ F L L + N + D + L SL+ L + + L I R TF +
Sbjct: 325 EIQPKAFLGLHNLHTLVLYGNNITDLKSDTFEGLGSLQLLLLNANQLTCIRRGTFDHVPK 384
Query: 312 LKTLILSGNKLETLESGLFQNLTHLSVLEL 341
L L L N ++++ FQNLT LS L L
Sbjct: 385 LSMLSLYDNDIKSISEVTFQNLTSLSTLHL 414
Score = 113 (44.8 bits), Expect = 7.3e-13, Sum P(3) = 7.3e-13
Identities = 39/137 (28%), Positives = 64/137 (46%)
Query: 38 VARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNR 97
+ + L +Q+ ++KI P F++L L L L N + I F L L+ L L+R
Sbjct: 42 IPNDTIRLDLQDNEITKIGPNDFSSLMNLKALQLMDNQIVTIHNQSFSSLVFLQKLRLSR 101
Query: 98 CNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNV 157
+ ++ + F N L L+LS+N + D L L+ L+L ++ I L +NV
Sbjct: 102 NRIRHLPDNVFQNNLKLTHLDLSENDITVVSDAQLQGPEF--LEVLNLDKNHIFCLENNV 159
Query: 158 FANNTWLRNLNLAENEL 174
++ L L L N L
Sbjct: 160 ISSWVSLEVLTLNGNRL 176
Score = 110 (43.8 bits), Expect = 0.00039, Sum P(3) = 0.00039
Identities = 40/148 (27%), Positives = 67/148 (45%)
Query: 181 TTLGQNLVHLDS--LDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLT 238
T + QN+ + D+ LDL + + + + F + L+ L L N + + + L
Sbjct: 36 TEVPQNIPN-DTIRLDLQDNEIT-KIGPNDFSSLMNLKALQLMDNQIVTIH-NQSFSSLV 92
Query: 239 KLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNL 298
L +L L + LP N F L LD+S N + A L E LE L++ +++
Sbjct: 93 FLQKLRLSRNRIRHLPDNVFQNNLKLTHLDLSENDITVVSDAQLQGPEFLEVLNLDKNHI 152
Query: 299 QRISRSTFLKMTSLKTLILSGNKLETLE 326
+ + SL+ L L+GN+L T E
Sbjct: 153 FCLENNVISSWVSLEVLTLNGNRLTTFE 180
Score = 85 (35.0 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 30/105 (28%), Positives = 47/105 (44%)
Query: 218 LYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDA 277
LYL N ++ L L L +L L + L L NTF T L L IS+N L
Sbjct: 709 LYLDANYINEIPAH-DLNRLYSLTKLDLSHNRLISLENNTFSNLTRLSTLIISYNKLRCL 767
Query: 278 FTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKL 322
+ L +L L + +++ + +S F +TS+ + + N L
Sbjct: 768 QPLAFNGLNALRILSLHGNDISFLPQSAFSNLTSITHIAVGSNSL 812
Score = 72 (30.4 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 517 NRAITSIKLVGNPWKCDCNIADMWEWATREKG 548
N + L NPW CDC + M +W + +G
Sbjct: 184 NARFRQLDLFNNPWNCDCRLRWMRKWLEKAEG 215
Score = 62 (26.9 bits), Expect = 5.3e-15, Sum P(3) = 5.3e-15
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 517 NRA--ITSIKLVGNPWKCDCNIADMWEW 542
N+A I IK++GN CDC I + W
Sbjct: 606 NKATRIREIKVIGNDLLCDCRILPLMSW 633
Score = 53 (23.7 bits), Expect = 1.0e-05, Sum P(3) = 1.0e-05
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 509 ISPTVLRHNRAITSIKLVGNPWKCDCNI 536
IS ++ +++++ L NP CDCN+
Sbjct: 398 ISEVTFQNLTSLSTLHLAKNPLICDCNL 425
Score = 52 (23.4 bits), Expect = 5.6e-14, Sum P(3) = 5.6e-14
Identities = 34/132 (25%), Positives = 54/132 (40%)
Query: 350 NETVFHENYTYPDLEELRLSGNPLHVLP--DSTKQYSMRTIPTQIWKNFDFLVILFILNE 407
N T F + D EL L N ++ +P D + YS+ T++ + + L+ L N
Sbjct: 694 NLTSFPSRIPF-DTTELYLDANYINEIPAHDLNRLYSL----TKLDLSHNRLISLE--NN 746
Query: 408 TVFHENYTYPDLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTR 467
T N T L L +S N L L I +LP + F+N
Sbjct: 747 TF--SNLTR--LSTLIISYNKLRCLQP--LAFNGLNALRILSLHGNDISFLPQSAFSNLT 800
Query: 468 NITSLNLANNNL 479
+IT + + +N+L
Sbjct: 801 SITHIAVGSNSL 812
Score = 52 (23.4 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 10/34 (29%), Positives = 20/34 (58%)
Query: 454 KIDYLPPNVFNNTRNITSLNLANNNLSMTSELSF 487
+I +P + F N +N+T L+L+ N ++ +F
Sbjct: 298 QISSIPSHSFKNLKNLTRLDLSKNIITEIQPKAF 331
Score = 48 (22.0 bits), Expect = 1.4e-13, Sum P(3) = 1.4e-13
Identities = 19/78 (24%), Positives = 33/78 (42%)
Query: 468 NITSLNLANNNLSMTSELSFQFXXXXXXXXXXXXXXXXXTHISPTVLRHNRAITSIKLVG 527
N+ L+L+NN+++ ++ SF+ H S VL + + L G
Sbjct: 538 NLEVLDLSNNHITFINDKSFE---KLSKLRELRLNDNKLHHFSSMVLDEQSNLEILDLSG 594
Query: 528 NPWKCDCNIADMWEWATR 545
N +C +I + ATR
Sbjct: 595 NNIQCFSSI--FFNKATR 610
>RGD|628615 [details] [associations]
symbol:Lgr4 "leucine-rich repeat-containing G protein-coupled
receptor 4" species:10116 "Rattus norvegicus" [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016500 "protein-hormone receptor activity"
evidence=IEA] [GO:0030539 "male genitalia development"
evidence=IEA;ISO] [GO:0035239 "tube morphogenesis" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA;ISO] [GO:0050673
"epithelial cell proliferation" evidence=IEA;ISO] [GO:0061290
"canonical Wnt receptor signaling pathway involved in metanephric
kidney development" evidence=IEA;ISO] [GO:0072202 "cell
differentiation involved in metanephros development"
evidence=IEA;ISO] [GO:0072224 "metanephric glomerulus development"
evidence=IEA;ISO] [GO:0072282 "metanephric nephron tubule
morphogenesis" evidence=IEA;ISO] [GO:0090190 "positive regulation
of branching involved in ureteric bud morphogenesis"
evidence=IEA;ISO] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000276 InterPro:IPR002131 InterPro:IPR017452
Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373 PROSITE:PS00237
PROSITE:PS50262 PROSITE:PS51450 EMBL:AF061443 RGD:628615
GO:GO:0016021 GO:GO:0005886 GO:GO:0045892 GO:GO:0045893
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0030539
GO:GO:0090190 GO:GO:0050673 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0016500 GO:GO:0061290 GO:GO:0072282 CTD:55366
HOVERGEN:HBG031675 KO:K04309 OrthoDB:EOG476JZH GO:GO:0072202
GO:GO:0072224 HOGENOM:HOG000231829 IPI:IPI00339207
RefSeq:NP_775450.1 UniGene:Rn.162671 ProteinModelPortal:Q9Z2H4
PhosphoSite:Q9Z2H4 GeneID:286994 KEGG:rno:286994 UCSC:RGD:628615
InParanoid:Q9Z2H4 NextBio:625274 ArrayExpress:Q9Z2H4
Genevestigator:Q9Z2H4 GermOnline:ENSRNOG00000005715 Uniprot:Q9Z2H4
Length = 951
Score = 226 (84.6 bits), Expect = 5.7e-15, P = 5.7e-15
Identities = 106/381 (27%), Positives = 169/381 (44%)
Query: 20 ITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRII 79
+ I++N N Q E AF L L + LS I+P+ + L L L L N LR +
Sbjct: 62 LDISMN-NITQLPEDAFKSFPFLEELQLAGNDLSLIHPKALSGLKELKVLTLQNNQLRTV 120
Query: 80 EPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGK 139
L++L+ L L+ ++T + +F+ L L+ L L N L + + L NL
Sbjct: 121 PSEAIHGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSL-TEVP-VRPLSNLPT 178
Query: 140 LDTLDLRQSGISNLPDNVFANNTWLRNLNLAENEL-------ID-LDVATTLGQNLVHLD 191
L L L + IS++PD F N + L L+L N++ D LD TL N +LD
Sbjct: 179 LQALTLALNNISSIPDFAFTNLSSLVVLHLHNNKIKSLSQHCFDGLDNLETLDLNYNYLD 238
Query: 192 ----------SLDLSNCHLKG--PLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTK 239
SL H + + AF LRT++L NPLS S A L+
Sbjct: 239 EFPQAIKALPSLKELGFHSNSISVIPDGAFGGNPLLRTIHLYDNPLSFVGNS-AFHNLSD 297
Query: 240 LHRLSLRNCGLSR-LP--ANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYS 296
LH L +R L + P T H L+ L ++ + L + L LD+ Y+
Sbjct: 298 LHCLVIRGASLVQWFPNLTGTVH----LESLTLTGTKISSIPDDLCQNQKMLRTLDLSYN 353
Query: 297 NLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHE 356
N++ + +F +L+ + L N++ ++ FQ LT L +L+L+ + ++ F +
Sbjct: 354 NIRDLP--SFNGCRALEEISLQRNQISLIKENTFQGLTSLRILDLSRNLIREIHSGAFAK 411
Query: 357 NYTYPDLEELRLSGNPLHVLP 377
T +L+ +S N L P
Sbjct: 412 LGTITNLD---VSFNELTSFP 429
Score = 224 (83.9 bits), Expect = 9.4e-15, P = 9.4e-15
Identities = 91/327 (27%), Positives = 153/327 (46%)
Query: 19 LITINLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLR 77
L ++ L+AN I V E +F L +L++ + +L+++ + +NL TL L L+ N +
Sbjct: 131 LQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSLTEVPVRPLSNLPTLQALTLALNNIS 190
Query: 78 IIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNL 137
I F L+SL L L+ + +S FD L++L+TL+L+ N L ++ + L
Sbjct: 191 SIPDFAFTNLSSLVVLHLHNNKIKSLSQHCFDGLDNLETLDLNYNYLD---EFPQAIKAL 247
Query: 138 GKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSN 197
L L + IS +PD F N LR ++L +N L + +G + H S DL
Sbjct: 248 PSLKELGFHSNSISVIPDGAFGGNPLLRTIHLYDNPL------SFVGNSAFHNLS-DLHC 300
Query: 198 CHLKGPLSEDAFVNAT---KLRTLYLSGNPLSAA--DLSVALKPLTKLHRLSLRNCGLSR 252
++G F N T L +L L+G +S+ DL K L L LS N +
Sbjct: 301 LVIRGASLVQWFPNLTGTVHLESLTLTGTKISSIPDDLCQNQKMLRTLD-LSYNN--IRD 357
Query: 253 LPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSL 312
LP+ F+ L+E+ + N + L SL LD+ + ++ I F K+ ++
Sbjct: 358 LPS--FNGCRALEEISLQRNQISLIKENTFQGLTSLRILDLSRNLIREIHSGAFAKLGTI 415
Query: 313 KTLILSGNKLETLESGLFQNLTHLSVL 339
L +S N+L + + L L ++
Sbjct: 416 TNLDVSFNELTSFPTEGLNGLNQLKLV 442
Score = 199 (75.1 bits), Expect = 4.8e-12, P = 4.8e-12
Identities = 90/333 (27%), Positives = 145/333 (43%)
Query: 52 LSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNL 111
++++ F + L +L L+GN L +I P L L+ L L L + A L
Sbjct: 69 ITQLPEDAFKSFPFLEELQLAGNDLSLIHPKALSGLKELKVLTLQNNQLRTVPSEAIHGL 128
Query: 112 NHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAE 171
+ L++L L N + S + + L +L L L + ++ +P +N L+ L LA
Sbjct: 129 SALQSLRLDANHITSVPEDSFE--GLVQLRHLWLDDNSLTEVPVRPLSNLPTLQALTLAL 186
Query: 172 NELIDL-DVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADL 230
N + + D A T NL L L L N +K LS+ F L TL L+ N L +
Sbjct: 187 NNISSIPDFAFT---NLSSLVVLHLHNNKIKS-LSQHCFDGLDNLETLDLNYNYLD--EF 240
Query: 231 SVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEH 290
A+K L L L + +S +P F L+ + + NPL + L L
Sbjct: 241 PQAIKALPSLKELGFHSNSISVIPDGAFGGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHC 300
Query: 291 LDM-GYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRL 349
L + G S +Q T L++L L+G K+ ++ L QN L L+L+ + L
Sbjct: 301 LVIRGASLVQWFPNLT--GTVHLESLTLTGTKISSIPDDLCQNQKMLRTLDLSYNNIRDL 358
Query: 350 NETVFHENYTYPDLEELRLSGNPLHVLPDSTKQ 382
F+ LEE+ L N + ++ ++T Q
Sbjct: 359 PS--FNGCRA---LEEISLQRNQISLIKENTFQ 386
Score = 174 (66.3 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 83/339 (24%), Positives = 147/339 (43%)
Query: 143 LDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKG 202
+D G++ +P+ + A + + L+++ N + L ++ L+ L L+ L
Sbjct: 41 VDCSGKGLTAVPEGLSA---FTQALDISMNNITQLPEDAF--KSFPFLEELQLAGNDLS- 94
Query: 203 PLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFT 262
+ A +L+ L L N L S A+ L+ L L L ++ +P ++F
Sbjct: 95 LIHPKALSGLKELKVLTLQNNQLRTVP-SEAIHGLSALQSLRLDANHITSVPEDSFEGLV 153
Query: 263 CLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKL 322
L+ L + N L + LS L +L+ L + +N+ I F ++SL L L NK+
Sbjct: 154 QLRHLWLDDNSLTEVPVRPLSNLPTLQALTLALNNISSIPDFAFTNLSSLVVLHLHNNKI 213
Query: 323 ETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQ 382
++L F L +L L+LN L + + P L+EL N + V+PD
Sbjct: 214 KSLSQHCFDGLDNLETLDLNYNYLDEFPQAI----KALPSLKELGFHSNSISVIPDGAFG 269
Query: 383 YS--MRTIPTQIWKNFDFLVILFILNETVFHENYTYPDLEELRLSGNPLHVLPTGNXXXX 440
+ +RTI ++ N + F+ N + FH N + DL L + G L V N
Sbjct: 270 GNPLLRTI--HLYDN----PLSFVGN-SAFH-NLS--DLHCLVIRGASL-VQWFPNLTGT 318
Query: 441 XXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNL 479
KI +P ++ N + + +L+L+ NN+
Sbjct: 319 VHLESLTLTGT--KISSIPDDLCQNQKMLRTLDLSYNNI 355
>UNIPROTKB|Q9Z2H4 [details] [associations]
symbol:Lgr4 "Leucine-rich repeat-containing G-protein
coupled receptor 4" species:10116 "Rattus norvegicus" [GO:0016500
"protein-hormone receptor activity" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS00237 PROSITE:PS50262 PROSITE:PS51450 EMBL:AF061443
RGD:628615 GO:GO:0016021 GO:GO:0005886 GO:GO:0045892 GO:GO:0045893
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0030539
GO:GO:0090190 GO:GO:0050673 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0016500 GO:GO:0061290 GO:GO:0072282 CTD:55366
HOVERGEN:HBG031675 KO:K04309 OrthoDB:EOG476JZH GO:GO:0072202
GO:GO:0072224 HOGENOM:HOG000231829 IPI:IPI00339207
RefSeq:NP_775450.1 UniGene:Rn.162671 ProteinModelPortal:Q9Z2H4
PhosphoSite:Q9Z2H4 GeneID:286994 KEGG:rno:286994 UCSC:RGD:628615
InParanoid:Q9Z2H4 NextBio:625274 ArrayExpress:Q9Z2H4
Genevestigator:Q9Z2H4 GermOnline:ENSRNOG00000005715 Uniprot:Q9Z2H4
Length = 951
Score = 226 (84.6 bits), Expect = 5.7e-15, P = 5.7e-15
Identities = 106/381 (27%), Positives = 169/381 (44%)
Query: 20 ITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRII 79
+ I++N N Q E AF L L + LS I+P+ + L L L L N LR +
Sbjct: 62 LDISMN-NITQLPEDAFKSFPFLEELQLAGNDLSLIHPKALSGLKELKVLTLQNNQLRTV 120
Query: 80 EPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGK 139
L++L+ L L+ ++T + +F+ L L+ L L N L + + L NL
Sbjct: 121 PSEAIHGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSL-TEVP-VRPLSNLPT 178
Query: 140 LDTLDLRQSGISNLPDNVFANNTWLRNLNLAENEL-------ID-LDVATTLGQNLVHLD 191
L L L + IS++PD F N + L L+L N++ D LD TL N +LD
Sbjct: 179 LQALTLALNNISSIPDFAFTNLSSLVVLHLHNNKIKSLSQHCFDGLDNLETLDLNYNYLD 238
Query: 192 ----------SLDLSNCHLKG--PLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTK 239
SL H + + AF LRT++L NPLS S A L+
Sbjct: 239 EFPQAIKALPSLKELGFHSNSISVIPDGAFGGNPLLRTIHLYDNPLSFVGNS-AFHNLSD 297
Query: 240 LHRLSLRNCGLSR-LP--ANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYS 296
LH L +R L + P T H L+ L ++ + L + L LD+ Y+
Sbjct: 298 LHCLVIRGASLVQWFPNLTGTVH----LESLTLTGTKISSIPDDLCQNQKMLRTLDLSYN 353
Query: 297 NLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHE 356
N++ + +F +L+ + L N++ ++ FQ LT L +L+L+ + ++ F +
Sbjct: 354 NIRDLP--SFNGCRALEEISLQRNQISLIKENTFQGLTSLRILDLSRNLIREIHSGAFAK 411
Query: 357 NYTYPDLEELRLSGNPLHVLP 377
T +L+ +S N L P
Sbjct: 412 LGTITNLD---VSFNELTSFP 429
Score = 224 (83.9 bits), Expect = 9.4e-15, P = 9.4e-15
Identities = 91/327 (27%), Positives = 153/327 (46%)
Query: 19 LITINLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLR 77
L ++ L+AN I V E +F L +L++ + +L+++ + +NL TL L L+ N +
Sbjct: 131 LQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSLTEVPVRPLSNLPTLQALTLALNNIS 190
Query: 78 IIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNL 137
I F L+SL L L+ + +S FD L++L+TL+L+ N L ++ + L
Sbjct: 191 SIPDFAFTNLSSLVVLHLHNNKIKSLSQHCFDGLDNLETLDLNYNYLD---EFPQAIKAL 247
Query: 138 GKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSN 197
L L + IS +PD F N LR ++L +N L + +G + H S DL
Sbjct: 248 PSLKELGFHSNSISVIPDGAFGGNPLLRTIHLYDNPL------SFVGNSAFHNLS-DLHC 300
Query: 198 CHLKGPLSEDAFVNAT---KLRTLYLSGNPLSAA--DLSVALKPLTKLHRLSLRNCGLSR 252
++G F N T L +L L+G +S+ DL K L L LS N +
Sbjct: 301 LVIRGASLVQWFPNLTGTVHLESLTLTGTKISSIPDDLCQNQKMLRTLD-LSYNN--IRD 357
Query: 253 LPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSL 312
LP+ F+ L+E+ + N + L SL LD+ + ++ I F K+ ++
Sbjct: 358 LPS--FNGCRALEEISLQRNQISLIKENTFQGLTSLRILDLSRNLIREIHSGAFAKLGTI 415
Query: 313 KTLILSGNKLETLESGLFQNLTHLSVL 339
L +S N+L + + L L ++
Sbjct: 416 TNLDVSFNELTSFPTEGLNGLNQLKLV 442
Score = 199 (75.1 bits), Expect = 4.8e-12, P = 4.8e-12
Identities = 90/333 (27%), Positives = 145/333 (43%)
Query: 52 LSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNL 111
++++ F + L +L L+GN L +I P L L+ L L L + A L
Sbjct: 69 ITQLPEDAFKSFPFLEELQLAGNDLSLIHPKALSGLKELKVLTLQNNQLRTVPSEAIHGL 128
Query: 112 NHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAE 171
+ L++L L N + S + + L +L L L + ++ +P +N L+ L LA
Sbjct: 129 SALQSLRLDANHITSVPEDSFE--GLVQLRHLWLDDNSLTEVPVRPLSNLPTLQALTLAL 186
Query: 172 NELIDL-DVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADL 230
N + + D A T NL L L L N +K LS+ F L TL L+ N L +
Sbjct: 187 NNISSIPDFAFT---NLSSLVVLHLHNNKIKS-LSQHCFDGLDNLETLDLNYNYLD--EF 240
Query: 231 SVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEH 290
A+K L L L + +S +P F L+ + + NPL + L L
Sbjct: 241 PQAIKALPSLKELGFHSNSISVIPDGAFGGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHC 300
Query: 291 LDM-GYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRL 349
L + G S +Q T L++L L+G K+ ++ L QN L L+L+ + L
Sbjct: 301 LVIRGASLVQWFPNLT--GTVHLESLTLTGTKISSIPDDLCQNQKMLRTLDLSYNNIRDL 358
Query: 350 NETVFHENYTYPDLEELRLSGNPLHVLPDSTKQ 382
F+ LEE+ L N + ++ ++T Q
Sbjct: 359 PS--FNGCRA---LEEISLQRNQISLIKENTFQ 386
Score = 174 (66.3 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 83/339 (24%), Positives = 147/339 (43%)
Query: 143 LDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKG 202
+D G++ +P+ + A + + L+++ N + L ++ L+ L L+ L
Sbjct: 41 VDCSGKGLTAVPEGLSA---FTQALDISMNNITQLPEDAF--KSFPFLEELQLAGNDLS- 94
Query: 203 PLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFT 262
+ A +L+ L L N L S A+ L+ L L L ++ +P ++F
Sbjct: 95 LIHPKALSGLKELKVLTLQNNQLRTVP-SEAIHGLSALQSLRLDANHITSVPEDSFEGLV 153
Query: 263 CLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKL 322
L+ L + N L + LS L +L+ L + +N+ I F ++SL L L NK+
Sbjct: 154 QLRHLWLDDNSLTEVPVRPLSNLPTLQALTLALNNISSIPDFAFTNLSSLVVLHLHNNKI 213
Query: 323 ETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQ 382
++L F L +L L+LN L + + P L+EL N + V+PD
Sbjct: 214 KSLSQHCFDGLDNLETLDLNYNYLDEFPQAI----KALPSLKELGFHSNSISVIPDGAFG 269
Query: 383 YS--MRTIPTQIWKNFDFLVILFILNETVFHENYTYPDLEELRLSGNPLHVLPTGNXXXX 440
+ +RTI ++ N + F+ N + FH N + DL L + G L V N
Sbjct: 270 GNPLLRTI--HLYDN----PLSFVGN-SAFH-NLS--DLHCLVIRGASL-VQWFPNLTGT 318
Query: 441 XXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNL 479
KI +P ++ N + + +L+L+ NN+
Sbjct: 319 VHLESLTLTGT--KISSIPDDLCQNQKMLRTLDLSYNNI 355
>MGI|MGI:3027390 [details] [associations]
symbol:Lrrc4b "leucine rich repeat containing 4B"
species:10090 "Mus musculus" [GO:0005102 "receptor binding"
evidence=IPI] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] [GO:0051965 "positive regulation of synapse assembly"
evidence=IDA] InterPro:IPR001611 InterPro:IPR007110
InterPro:IPR026883 PROSITE:PS50835 PROSITE:PS51450 MGI:MGI:3027390
GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0030054 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0042734 GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 InterPro:IPR026906
Pfam:PF13306 GeneTree:ENSGT00690000101682 CTD:94030
HOGENOM:HOG000252924 HOVERGEN:HBG052359 KO:K16360 OMA:NNTTCCA
OrthoDB:EOG4W9J3K PANTHER:PTHR24369:SF7 EMBL:BC060263 EMBL:AK140418
IPI:IPI00381059 RefSeq:NP_937893.1 UniGene:Mm.44173 PDB:3ZYN
PDB:3ZYO PDBsum:3ZYN PDBsum:3ZYO ProteinModelPortal:P0C192
SMR:P0C192 IntAct:P0C192 STRING:P0C192 PhosphoSite:P0C192
PaxDb:P0C192 PRIDE:P0C192 Ensembl:ENSMUST00000058667 GeneID:272381
KEGG:mmu:272381 UCSC:uc009gpj.1 InParanoid:P0C192
EvolutionaryTrace:P0C192 NextBio:393574 Bgee:P0C192
CleanEx:MM_LRRC4B Genevestigator:P0C192
GermOnline:ENSMUSG00000047085 Uniprot:P0C192
Length = 709
Score = 224 (83.9 bits), Expect = 5.9e-15, P = 5.9e-15
Identities = 72/228 (31%), Positives = 114/228 (50%)
Query: 69 LDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHI 128
L+L N +++I F L LE L L++ + I AF+ L L TLEL N+L + +
Sbjct: 93 LNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTT-V 151
Query: 129 DWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLV 188
T L KL L LR + I ++P F LR L+L E + ++ ++ + LV
Sbjct: 152 P-TQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEY-ISEAAFEGLV 209
Query: 189 HLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNC 248
+L L+L C+LK + A V +L L LSGN L + + LT L +L L +
Sbjct: 210 NLRYLNLGMCNLKDIPNLTALV---RLEELELSGNRLDLIRPG-SFQGLTSLRKLWLMHA 265
Query: 249 GLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYS 296
++ + N F L+EL++SHN L+ L +PL LE + + ++
Sbjct: 266 QVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHN 313
Score = 194 (73.4 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 71/231 (30%), Positives = 110/231 (47%)
Query: 44 YLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYI 103
YL +QE ++ I F +L L L LS N +R IE G F+ L SL L L LT +
Sbjct: 92 YLNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTV 151
Query: 104 SPSAFDNLNHLKTLELSQNKLKSHIDWTLV-LGNLGKLDTLDLRQSGISNLPDNVFANNT 162
AF+ L+ L+ L L N ++S + + +L +LD +L++ + + + F
Sbjct: 152 PTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKR--LEYISEAAFEGLV 209
Query: 163 WLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSG 222
LR LNL L D+ T L V L+ L+LS L + +F T LR L+L
Sbjct: 210 NLRYLNLGMCNLKDIPNLTAL----VRLEELELSGNRLD-LIRPGSFQGLTSLRKLWLMH 264
Query: 223 NPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNP 273
++ + + A L L L+L + L LP + F L+ + ++HNP
Sbjct: 265 AQVATIERN-AFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHNP 314
Score = 159 (61.0 bits), Expect = 6.9e-08, P = 6.9e-08
Identities = 65/233 (27%), Positives = 108/233 (46%)
Query: 143 LDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKG 202
L+L+++ I + + F + L L L++N + ++V G L L++L+L + L
Sbjct: 93 LNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNG--LPSLNTLELFDNRLT- 149
Query: 203 PLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCG-LSRLPANTFHRF 261
+ AF +KLR L+L NP+ + S A + L RL L L + F
Sbjct: 150 TVPTQAFEYLSKLRELWLRNNPIESIP-SYAFNRVPSLRRLDLGELKRLEYISEAAFEGL 208
Query: 262 TCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNK 321
L+ L++ L D L+ L LE L++ + L I +F +TSL+ L L +
Sbjct: 209 VNLRYLNLGMCNLKDIPN--LTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQ 266
Query: 322 LETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLH 374
+ T+E F +L L L L++ L L +F + LE + L+ NP H
Sbjct: 267 VATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHR---LERVHLNHNPWH 316
Score = 157 (60.3 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 73/256 (28%), Positives = 116/256 (45%)
Query: 22 INLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIE 80
+ L+ N ++ +E GAF SL L + + L+ + Q F L+ L +L L NP+ I
Sbjct: 117 LQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIP 176
Query: 81 PGVFDPLTSLEYLMLNRCN-LTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGK 139
F+ + SL L L L YIS +AF+ L +L+ L L LK + T ++ +
Sbjct: 177 SYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLKDIPNLTALV----R 232
Query: 140 LDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCH 199
L+ L+L + + + F T LR L L ++ ++ +L L+ L+LS+ +
Sbjct: 233 LEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIE--RNAFDDLKSLEELNLSHNN 290
Query: 200 LKGPLSEDAFVNATKLRTLYLSGNPLSA-AD---LSVALKPLTKLHRLSLRNCGLSRLPA 255
L L D F +L ++L+ NP D LS LK + C PA
Sbjct: 291 LMS-LPHDLFTPLHRLERVHLNHNPWHCNCDVLWLSWWLKETVPSNTTCCARC---HAPA 346
Query: 256 NTFHRFTCLQELDISH 271
R+ + ELD SH
Sbjct: 347 GLKGRY--IGELDQSH 360
Score = 130 (50.8 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 59/212 (27%), Positives = 96/212 (45%)
Query: 290 HLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRL 349
+L++ +++Q I TF + L+ L LS N + +E G F L L+ LEL + LT +
Sbjct: 92 YLNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTV 151
Query: 350 NETVFHENYTYPDLEELRLSGNPLHVLPDST--KQYSMRTIPTQIWKNFDF--------L 399
F Y L EL L NP+ +P + S+R + K ++ L
Sbjct: 152 PTQAFE--YL-SKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGL 208
Query: 400 VILFILNETVFH----ENYT-YPDLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCK 454
V L LN + + N T LEEL LSGN L ++ G+ +
Sbjct: 209 VNLRYLNLGMCNLKDIPNLTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHA--Q 266
Query: 455 IDYLPPNVFNNTRNITSLNLANNNL-SMTSEL 485
+ + N F++ +++ LNL++NNL S+ +L
Sbjct: 267 VATIERNAFDDLKSLEELNLSHNNLMSLPHDL 298
Score = 128 (50.1 bits), Expect = 0.00016, P = 0.00016
Identities = 65/228 (28%), Positives = 97/228 (42%)
Query: 117 LELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELID 176
L L +N ++ + T +L L+ L L ++ + + F L L L +N L
Sbjct: 93 LNLQENSIQ--VIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTT 150
Query: 177 LDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLS-VALK 235
V T + L L L L N ++ + AF LR L L G +S A +
Sbjct: 151 --VPTQAFEYLSKLRELWLRNNPIES-IPSYAFNRVPSLRRLDL-GELKRLEYISEAAFE 206
Query: 236 PLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGY 295
L L L+L C L +P T L+EL++S N L L SL L + +
Sbjct: 207 GLVNLRYLNLGMCNLKDIPNLT--ALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMH 264
Query: 296 SNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNN 343
+ + I R+ F + SL+ L LS N L +L LF L L + LN+
Sbjct: 265 AQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNH 312
>RGD|1307121 [details] [associations]
symbol:Lrrc4b "leucine rich repeat containing 4B" species:10116
"Rattus norvegicus" [GO:0005102 "receptor binding"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0042734 "presynaptic membrane"
evidence=IEA] [GO:0051965 "positive regulation of synapse assembly"
evidence=IEA;ISO] InterPro:IPR001611 InterPro:IPR007110
InterPro:IPR026883 PROSITE:PS50835 PROSITE:PS51450 RGD:1307121
GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0030054 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0042734 GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 InterPro:IPR026906
Pfam:PF13306 GeneTree:ENSGT00690000101682 CTD:94030
HOGENOM:HOG000252924 KO:K16360 OMA:NNTTCCA OrthoDB:EOG4W9J3K
PANTHER:PTHR24369:SF7 EMBL:CB608563 IPI:IPI00367477
RefSeq:NP_001258010.1 RefSeq:XP_001077685.1 UniGene:Rn.22207
ProteinModelPortal:P0CC10 STRING:P0CC10 PRIDE:P0CC10
Ensembl:ENSRNOT00000026259 GeneID:308571 KEGG:rno:308571
UCSC:RGD:1307121 NextBio:659144 Uniprot:P0CC10
Length = 709
Score = 224 (83.9 bits), Expect = 5.9e-15, P = 5.9e-15
Identities = 72/228 (31%), Positives = 114/228 (50%)
Query: 69 LDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHI 128
L+L N +++I F L LE L L++ + I AF+ L L TLEL N+L + +
Sbjct: 93 LNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTT-V 151
Query: 129 DWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLV 188
T L KL L LR + I ++P F LR L+L E + ++ ++ + LV
Sbjct: 152 P-TQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEY-ISEAAFEGLV 209
Query: 189 HLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNC 248
+L L+L C+LK + A V +L L LSGN L + + LT L +L L +
Sbjct: 210 NLRYLNLGMCNLKDIPNLTALV---RLEELELSGNRLDLIRPG-SFQGLTSLRKLWLMHA 265
Query: 249 GLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYS 296
++ + N F L+EL++SHN L+ L +PL LE + + ++
Sbjct: 266 QVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHN 313
Score = 194 (73.4 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 71/231 (30%), Positives = 110/231 (47%)
Query: 44 YLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYI 103
YL +QE ++ I F +L L L LS N +R IE G F+ L SL L L LT +
Sbjct: 92 YLNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTV 151
Query: 104 SPSAFDNLNHLKTLELSQNKLKSHIDWTLV-LGNLGKLDTLDLRQSGISNLPDNVFANNT 162
AF+ L+ L+ L L N ++S + + +L +LD +L++ + + + F
Sbjct: 152 PTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKR--LEYISEAAFEGLV 209
Query: 163 WLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSG 222
LR LNL L D+ T L V L+ L+LS L + +F T LR L+L
Sbjct: 210 NLRYLNLGMCNLKDIPNLTAL----VRLEELELSGNRLD-LIRPGSFQGLTSLRKLWLMH 264
Query: 223 NPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNP 273
++ + + A L L L+L + L LP + F L+ + ++HNP
Sbjct: 265 AQVATIERN-AFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHNP 314
Score = 159 (61.0 bits), Expect = 6.9e-08, P = 6.9e-08
Identities = 65/233 (27%), Positives = 108/233 (46%)
Query: 143 LDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKG 202
L+L+++ I + + F + L L L++N + ++V G L L++L+L + L
Sbjct: 93 LNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNG--LPSLNTLELFDNRLT- 149
Query: 203 PLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCG-LSRLPANTFHRF 261
+ AF +KLR L+L NP+ + S A + L RL L L + F
Sbjct: 150 TVPTQAFEYLSKLRELWLRNNPIESIP-SYAFNRVPSLRRLDLGELKRLEYISEAAFEGL 208
Query: 262 TCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNK 321
L+ L++ L D L+ L LE L++ + L I +F +TSL+ L L +
Sbjct: 209 VNLRYLNLGMCNLKDIPN--LTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQ 266
Query: 322 LETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLH 374
+ T+E F +L L L L++ L L +F + LE + L+ NP H
Sbjct: 267 VATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHR---LERVHLNHNPWH 316
Score = 157 (60.3 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 73/256 (28%), Positives = 116/256 (45%)
Query: 22 INLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIE 80
+ L+ N ++ +E GAF SL L + + L+ + Q F L+ L +L L NP+ I
Sbjct: 117 LQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIP 176
Query: 81 PGVFDPLTSLEYLMLNRCN-LTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGK 139
F+ + SL L L L YIS +AF+ L +L+ L L LK + T ++ +
Sbjct: 177 SYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLKDIPNLTALV----R 232
Query: 140 LDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCH 199
L+ L+L + + + F T LR L L ++ ++ +L L+ L+LS+ +
Sbjct: 233 LEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIE--RNAFDDLKSLEELNLSHNN 290
Query: 200 LKGPLSEDAFVNATKLRTLYLSGNPLSA-AD---LSVALKPLTKLHRLSLRNCGLSRLPA 255
L L D F +L ++L+ NP D LS LK + C PA
Sbjct: 291 LMS-LPHDLFTPLHRLERVHLNHNPWHCNCDVLWLSWWLKETVPSNTTCCARC---HAPA 346
Query: 256 NTFHRFTCLQELDISH 271
R+ + ELD SH
Sbjct: 347 GLKGRY--IGELDQSH 360
Score = 130 (50.8 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 59/212 (27%), Positives = 96/212 (45%)
Query: 290 HLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRL 349
+L++ +++Q I TF + L+ L LS N + +E G F L L+ LEL + LT +
Sbjct: 92 YLNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTV 151
Query: 350 NETVFHENYTYPDLEELRLSGNPLHVLPDST--KQYSMRTIPTQIWKNFDF--------L 399
F Y L EL L NP+ +P + S+R + K ++ L
Sbjct: 152 PTQAFE--YL-SKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGL 208
Query: 400 VILFILNETVFH----ENYT-YPDLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCK 454
V L LN + + N T LEEL LSGN L ++ G+ +
Sbjct: 209 VNLRYLNLGMCNLKDIPNLTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHA--Q 266
Query: 455 IDYLPPNVFNNTRNITSLNLANNNL-SMTSEL 485
+ + N F++ +++ LNL++NNL S+ +L
Sbjct: 267 VATIERNAFDDLKSLEELNLSHNNLMSLPHDL 298
Score = 128 (50.1 bits), Expect = 0.00016, P = 0.00016
Identities = 65/228 (28%), Positives = 97/228 (42%)
Query: 117 LELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELID 176
L L +N ++ + T +L L+ L L ++ + + F L L L +N L
Sbjct: 93 LNLQENSIQ--VIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTT 150
Query: 177 LDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLS-VALK 235
V T + L L L L N ++ + AF LR L L G +S A +
Sbjct: 151 --VPTQAFEYLSKLRELWLRNNPIES-IPSYAFNRVPSLRRLDL-GELKRLEYISEAAFE 206
Query: 236 PLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGY 295
L L L+L C L +P T L+EL++S N L L SL L + +
Sbjct: 207 GLVNLRYLNLGMCNLKDIPNLT--ALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMH 264
Query: 296 SNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNN 343
+ + I R+ F + SL+ L LS N L +L LF L L + LN+
Sbjct: 265 AQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNH 312
>UNIPROTKB|Q86UN3 [details] [associations]
symbol:RTN4RL2 "Reticulon-4 receptor-like 2" species:9606
"Homo sapiens" [GO:0009897 "external side of plasma membrane"
evidence=IEA] [GO:0045121 "membrane raft" evidence=IEA] [GO:0009986
"cell surface" evidence=IDA] [GO:0004872 "receptor activity"
evidence=IDA] [GO:0031103 "axon regeneration" evidence=TAS]
[GO:0046658 "anchored to plasma membrane" evidence=IDA]
GO:GO:0009986 GO:GO:0009897 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0004872
GO:GO:0045121 InterPro:IPR000372 SMART:SM00013 GO:GO:0046658
GO:GO:0031103 EMBL:AP002893 HOGENOM:HOG000116109 HOVERGEN:HBG063707
OrthoDB:EOG4FXR7G EMBL:AF532858 EMBL:AY250221 EMBL:BC113673
EMBL:BC117276 EMBL:BK001302 IPI:IPI00328746 RefSeq:NP_848665.1
UniGene:Hs.502618 ProteinModelPortal:Q86UN3 SMR:Q86UN3
IntAct:Q86UN3 STRING:Q86UN3 PhosphoSite:Q86UN3 DMDM:74759401
PaxDb:Q86UN3 PRIDE:Q86UN3 Ensembl:ENST00000335099 GeneID:349667
KEGG:hsa:349667 UCSC:uc010rjt.2 CTD:349667 GeneCards:GC11P057228
HGNC:HGNC:23053 HPA:CAB024870 MIM:610462 neXtProt:NX_Q86UN3
PharmGKB:PA134964131 InParanoid:Q86UN3 KO:K16661 OMA:WFREARV
PhylomeDB:Q86UN3 GenomeRNAi:349667 NextBio:99528
ArrayExpress:Q86UN3 Bgee:Q86UN3 CleanEx:HS_RTN4RL2
Genevestigator:Q86UN3 GermOnline:ENSG00000186907 Uniprot:Q86UN3
Length = 420
Score = 177 (67.4 bits), Expect = 6.2e-15, Sum P(2) = 6.2e-15
Identities = 65/206 (31%), Positives = 97/206 (47%)
Query: 68 KLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSH 127
+L L N +R + PG F ++L L L NL+ I P F +L L+ L+L N+
Sbjct: 64 RLFLQNNLIRTLRPGTFG--SNLLTLWLFSNNLSTIYPGTFRHLQALEELDLGDNRHLRS 121
Query: 128 IDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNL 187
++ G L +L +L L + +S+LP N+F L+ L L EN L+ L L +L
Sbjct: 122 LEPDTFQG-LERLQSLHLYRCQLSSLPGNIFRGLVSLQYLYLQENSLLHLQ--DDLFADL 178
Query: 188 VHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRN 247
+L L L L+ L+E F L L L GN L + A + L++L L L N
Sbjct: 179 ANLSHLFLHGNRLR-LLTEHVFRGLGSLDRLLLHGNRLQGVHRA-AFRGLSRLTILYLFN 236
Query: 248 CGLSRLPANTFHRFTCLQELDISHNP 273
L+ LP L+ L ++ NP
Sbjct: 237 NSLASLPGEALADLPSLEFLRLNANP 262
Score = 172 (65.6 bits), Expect = 2.2e-14, Sum P(2) = 2.2e-14
Identities = 61/202 (30%), Positives = 91/202 (45%)
Query: 171 ENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADL 230
+N LI T G NL+ +L L + +L + F + L L L N +
Sbjct: 68 QNNLIRTLRPGTFGSNLL---TLWLFSNNLS-TIYPGTFRHLQALEELDLGDNRHLRSLE 123
Query: 231 SVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEH 290
+ L +L L L C LS LP N F LQ L + N L+ L + L +L H
Sbjct: 124 PDTFQGLERLQSLHLYRCQLSSLPGNIFRGLVSLQYLYLQENSLLHLQDDLFADLANLSH 183
Query: 291 LDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLN 350
L + + L+ ++ F + SL L+L GN+L+ + F+ L+ L++L L N L L
Sbjct: 184 LFLHGNRLRLLTEHVFRGLGSLDRLLLHGNRLQGVHRAAFRGLSRLTILYLFNNSLASLP 243
Query: 351 ETVFHENYTYPDLEELRLSGNP 372
+ P LE LRL+ NP
Sbjct: 244 GEALAD---LPSLEFLRLNANP 262
Score = 154 (59.3 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 68/210 (32%), Positives = 93/210 (44%)
Query: 17 PGLITINLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNP 75
P + L N I+ + G F +LL L++ LS I P F +L L +LDL N
Sbjct: 60 PSTQRLFLQNNLIRTLRPGTF--GSNLLTLWLFSNNLSTIYPGTFRHLQALEELDLGDNR 117
Query: 76 -LRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVL 134
LR +EP F L L+ L L RC L+ + + F L L+ L L +N L H+ L
Sbjct: 118 HLRSLEPDTFQGLERLQSLHLYRCQLSSLPGNIFRGLVSLQYLYLQENSLL-HLQDDL-F 175
Query: 135 GNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLD 194
+L L L L + + L ++VF L L L N L + A G L L L
Sbjct: 176 ADLANLSHLFLHGNRLRLLTEHVFRGLGSLDRLLLHGNRLQGVHRAAFRG--LSRLTILY 233
Query: 195 LSNCHLKGPLSEDAFVNATKLRTLYLSGNP 224
L N L L +A + L L L+ NP
Sbjct: 234 LFNNSLAS-LPGEALADLPSLEFLRLNANP 262
Score = 119 (46.9 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 56/196 (28%), Positives = 83/196 (42%)
Query: 238 TKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTA-LLSPLESLEHLDMGYS 296
+ L L L + LS + TF L+ELD+ N + + LE L+ L +
Sbjct: 82 SNLLTLWLFSNNLSTIYPGTFRHLQALEELDLGDNRHLRSLEPDTFQGLERLQSLHLYRC 141
Query: 297 NLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHE 356
L + + F + SL+ L L N L L+ LF +L +LS L L+ L L E VF
Sbjct: 142 QLSSLPGNIFRGLVSLQYLYLQENSLLHLQDDLFADLANLSHLFLHGNRLRLLTEHVFRG 201
Query: 357 NYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFH---EN 413
L+ L L GN L + + ++ L IL++ N ++ E
Sbjct: 202 ---LGSLDRLLLHGNRL------------QGVHRAAFRGLSRLTILYLFNNSLASLPGEA 246
Query: 414 YT-YPDLEELRLSGNP 428
P LE LRL+ NP
Sbjct: 247 LADLPSLEFLRLNANP 262
Score = 89 (36.4 bits), Expect = 6.2e-15, Sum P(2) = 6.2e-15
Identities = 31/107 (28%), Positives = 43/107 (40%)
Query: 523 IKLVGNPWKCDCNIADMWEWATREKGDIGVLVGSTTPTEIG--FGASRKKKGLVCYFDIF 580
++L NPW CDC +W W R + + +T P G A R+ C
Sbjct: 256 LRLNANPWACDCRARPLWAWFQRARVSSSDVTCATPPERQGRDLRALREADFQACPP--- 312
Query: 581 TTPTRKRPGRELFASTNKTWARYVKEADCPS---SKLFRP-PRTNSR 623
PTR PG +++ V EA P S L+R P +SR
Sbjct: 313 AAPTR--PGSRARGNSSSNHLYGVAEAGAPPADPSTLYRDLPAEDSR 357
>MGI|MGI:1891468 [details] [associations]
symbol:Lgr4 "leucine-rich repeat-containing G
protein-coupled receptor 4" species:10090 "Mus musculus"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0004930
"G-protein coupled receptor activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016500
"protein-hormone receptor activity" evidence=IEA] [GO:0030539 "male
genitalia development" evidence=IMP] [GO:0035239 "tube
morphogenesis" evidence=IMP] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0050673 "epithelial cell proliferation" evidence=IMP]
[GO:0061290 "canonical Wnt receptor signaling pathway involved in
metanephric kidney development" evidence=IMP] [GO:0072202 "cell
differentiation involved in metanephros development" evidence=IMP]
[GO:0072224 "metanephric glomerulus development" evidence=IMP]
[GO:0072282 "metanephric nephron tubule morphogenesis"
evidence=IMP] [GO:0090190 "positive regulation of branching
involved in ureteric bud morphogenesis" evidence=IMP] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS00237 PROSITE:PS50262 PROSITE:PS51450 MGI:MGI:1891468
GO:GO:0016021 GO:GO:0005886 GO:GO:0045892 GO:GO:0045893
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0030539
GO:GO:0090190 GO:GO:0050673 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0016500 EMBL:AL928922
GeneTree:ENSGT00650000092962 GO:GO:0061290 GO:GO:0072282 CTD:55366
HOVERGEN:HBG031675 KO:K04309 OMA:DGYWSDC OrthoDB:EOG476JZH
ChiTaRS:LGR4 GO:GO:0072202 GO:GO:0072224 EMBL:AL845423
EMBL:AY255619 EMBL:AK044357 EMBL:BC056637 IPI:IPI00753252
RefSeq:NP_766259.2 UniGene:Mm.277351 UniGene:Mm.485992
ProteinModelPortal:A2ARI4 SMR:A2ARI4 STRING:A2ARI4
PhosphoSite:A2ARI4 PRIDE:A2ARI4 DNASU:107515
Ensembl:ENSMUST00000046548 GeneID:107515 KEGG:mmu:107515
UCSC:uc008lmq.1 HOGENOM:HOG000231829 InParanoid:A2ARI4
NextBio:358950 Bgee:A2ARI4 Genevestigator:A2ARI4 Uniprot:A2ARI4
Length = 951
Score = 225 (84.3 bits), Expect = 7.3e-15, P = 7.3e-15
Identities = 90/327 (27%), Positives = 153/327 (46%)
Query: 19 LITINLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLR 77
L ++ L+AN I V E +F L +L++ + L+++ + +NL TL L L+ N +
Sbjct: 131 LQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNILTEVPVRPLSNLPTLQALTLALNNIS 190
Query: 78 IIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNL 137
I F L+SL L L+ + +S FD L++L+TL+L+ N L ++ + L
Sbjct: 191 SIPDFAFTNLSSLVVLHLHNNKIKSLSQHCFDGLDNLETLDLNYNNLD---EFPQAIKAL 247
Query: 138 GKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSN 197
L L + IS +PD FA N LR ++L +N L + +G + H S DL +
Sbjct: 248 PSLKELGFHSNSISVIPDGAFAGNPLLRTIHLYDNPL------SFVGNSAFHNLS-DLHS 300
Query: 198 CHLKGPLSEDAFVN---ATKLRTLYLSGNPLSAA--DLSVALKPLTKLHRLSLRNCGLSR 252
++G F N L +L L+G +S+ DL K L L LS + +
Sbjct: 301 LVIRGASLVQWFPNLAGTVHLESLTLTGTKISSIPDDLCQNQKMLRTLD-LSYND--IRD 357
Query: 253 LPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSL 312
LP+ F+ L+E+ + N + L SL LD+ + ++ I F K+ ++
Sbjct: 358 LPS--FNGCRALEEISLQRNQISLIKETTFQGLTSLRILDLSRNLIREIHSGAFAKLGTI 415
Query: 313 KTLILSGNKLETLESGLFQNLTHLSVL 339
L +S N+L + + L L ++
Sbjct: 416 TNLDVSFNELTSFPTEGLNGLNQLKLV 442
Score = 218 (81.8 bits), Expect = 4.2e-14, P = 4.2e-14
Identities = 105/381 (27%), Positives = 170/381 (44%)
Query: 20 ITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRII 79
+ I++N N Q E AF L L + LS I+P+ + L L L L N L+ +
Sbjct: 62 LDISMN-NITQLPEDAFKNFPFLEELQLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTV 120
Query: 80 EPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGK 139
L++L+ L L+ ++T + +F+ L L+ L L N L + + L NL
Sbjct: 121 PSEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNIL-TEVP-VRPLSNLPT 178
Query: 140 LDTLDLRQSGISNLPDNVFANNTWLRNLNLAENEL-------ID-LDVATTLGQNLVHLD 191
L L L + IS++PD F N + L L+L N++ D LD TL N +LD
Sbjct: 179 LQALTLALNNISSIPDFAFTNLSSLVVLHLHNNKIKSLSQHCFDGLDNLETLDLNYNNLD 238
Query: 192 ----------SLDLSNCHLKG--PLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTK 239
SL H + + AF LRT++L NPLS S A L+
Sbjct: 239 EFPQAIKALPSLKELGFHSNSISVIPDGAFAGNPLLRTIHLYDNPLSFVGNS-AFHNLSD 297
Query: 240 LHRLSLRNCGLSR-LP--ANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYS 296
LH L +R L + P A T H L+ L ++ + L + L LD+ Y+
Sbjct: 298 LHSLVIRGASLVQWFPNLAGTVH----LESLTLTGTKISSIPDDLCQNQKMLRTLDLSYN 353
Query: 297 NLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHE 356
+++ + +F +L+ + L N++ ++ FQ LT L +L+L+ + ++ F +
Sbjct: 354 DIRDLP--SFNGCRALEEISLQRNQISLIKETTFQGLTSLRILDLSRNLIREIHSGAFAK 411
Query: 357 NYTYPDLEELRLSGNPLHVLP 377
T +L+ +S N L P
Sbjct: 412 LGTITNLD---VSFNELTSFP 429
Score = 195 (73.7 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 90/333 (27%), Positives = 143/333 (42%)
Query: 52 LSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNL 111
++++ F N L +L L+GN L I P L L+ L L L + A L
Sbjct: 69 ITQLPEDAFKNFPFLEELQLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAIRGL 128
Query: 112 NHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAE 171
+ L++L L N + S + + L +L L L + ++ +P +N L+ L LA
Sbjct: 129 SALQSLRLDANHITSVPEDSFE--GLVQLRHLWLDDNILTEVPVRPLSNLPTLQALTLAL 186
Query: 172 NELIDL-DVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADL 230
N + + D A T NL L L L N +K LS+ F L TL L+ N L +
Sbjct: 187 NNISSIPDFAFT---NLSSLVVLHLHNNKIKS-LSQHCFDGLDNLETLDLNYNNLD--EF 240
Query: 231 SVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEH 290
A+K L L L + +S +P F L+ + + NPL + L L
Sbjct: 241 PQAIKALPSLKELGFHSNSISVIPDGAFAGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHS 300
Query: 291 LDM-GYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRL 349
L + G S +Q L++L L+G K+ ++ L QN L L+L+ + L
Sbjct: 301 LVIRGASLVQWFPN--LAGTVHLESLTLTGTKISSIPDDLCQNQKMLRTLDLSYNDIRDL 358
Query: 350 NETVFHENYTYPDLEELRLSGNPLHVLPDSTKQ 382
F+ LEE+ L N + ++ ++T Q
Sbjct: 359 PS--FNGCRA---LEEISLQRNQISLIKETTFQ 386
Score = 184 (69.8 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 83/339 (24%), Positives = 148/339 (43%)
Query: 143 LDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKG 202
+D G++ +P+ + A + + L+++ N + L +N L+ L L+ L
Sbjct: 41 VDCSGKGLTAVPEGLSA---FTQALDISMNNITQLPEDAF--KNFPFLEELQLAGNDLSF 95
Query: 203 PLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFT 262
+ A +L+ L L N L S A++ L+ L L L ++ +P ++F
Sbjct: 96 -IHPKALSGLKELKVLTLQNNQLKTVP-SEAIRGLSALQSLRLDANHITSVPEDSFEGLV 153
Query: 263 CLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKL 322
L+ L + N L + LS L +L+ L + +N+ I F ++SL L L NK+
Sbjct: 154 QLRHLWLDDNILTEVPVRPLSNLPTLQALTLALNNISSIPDFAFTNLSSLVVLHLHNNKI 213
Query: 323 ETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQ 382
++L F L +L L+LN L + + P L+EL N + V+PD
Sbjct: 214 KSLSQHCFDGLDNLETLDLNYNNLDEFPQAI----KALPSLKELGFHSNSISVIPDGAFA 269
Query: 383 YS--MRTIPTQIWKNFDFLVILFILNETVFHENYTYPDLEELRLSGNPLHVLPTGNXXXX 440
+ +RTI ++ N + F+ N + FH N + DL L + G L V N
Sbjct: 270 GNPLLRTI--HLYDN----PLSFVGN-SAFH-NLS--DLHSLVIRGASL-VQWFPNLAGT 318
Query: 441 XXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNL 479
KI +P ++ N + + +L+L+ N++
Sbjct: 319 VHLESLTLTGT--KISSIPDDLCQNQKMLRTLDLSYNDI 355
>UNIPROTKB|E1BPK8 [details] [associations]
symbol:LRRC4B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051965 "positive regulation of synapse assembly"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
InterPro:IPR001611 InterPro:IPR007110 InterPro:IPR026883
PROSITE:PS50835 PROSITE:PS51450 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 CTD:94030 KO:K16360 OMA:NNTTCCA
PANTHER:PTHR24369:SF7 EMBL:DAAA02047507 IPI:IPI00733296
RefSeq:NP_001179210.1 UniGene:Bt.88262 ProteinModelPortal:E1BPK8
Ensembl:ENSBTAT00000043330 GeneID:539607 KEGG:bta:539607
NextBio:20878103 ArrayExpress:E1BPK8 Uniprot:E1BPK8
Length = 711
Score = 223 (83.6 bits), Expect = 7.6e-15, P = 7.6e-15
Identities = 72/228 (31%), Positives = 114/228 (50%)
Query: 69 LDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHI 128
L+L N +++I F L LE L L++ + I AF+ L L TLEL N+L + +
Sbjct: 91 LNLQENGIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTT-V 149
Query: 129 DWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLV 188
T L KL L LR + I ++P F LR L+L E + ++ ++ + LV
Sbjct: 150 P-TQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEY-ISEAAFEGLV 207
Query: 189 HLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNC 248
+L L+L C+LK + A V +L L LSGN L + + LT L +L L +
Sbjct: 208 NLRYLNLGMCNLKDIPNLTALV---RLEELELSGNRLDLIRPG-SFQGLTSLRKLWLMHA 263
Query: 249 GLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYS 296
++ + N F L+EL++SHN L+ L +PL LE + + ++
Sbjct: 264 QVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHN 311
Score = 191 (72.3 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 71/231 (30%), Positives = 109/231 (47%)
Query: 44 YLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYI 103
YL +QE + I F +L L L LS N +R IE G F+ L SL L L LT +
Sbjct: 90 YLNLQENGIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTV 149
Query: 104 SPSAFDNLNHLKTLELSQNKLKSHIDWTLV-LGNLGKLDTLDLRQSGISNLPDNVFANNT 162
AF+ L+ L+ L L N ++S + + +L +LD +L++ + + + F
Sbjct: 150 PTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKR--LEYISEAAFEGLV 207
Query: 163 WLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSG 222
LR LNL L D+ T L V L+ L+LS L + +F T LR L+L
Sbjct: 208 NLRYLNLGMCNLKDIPNLTAL----VRLEELELSGNRLD-LIRPGSFQGLTSLRKLWLMH 262
Query: 223 NPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNP 273
++ + + A L L L+L + L LP + F L+ + ++HNP
Sbjct: 263 AQVATIERN-AFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHNP 312
Score = 165 (63.1 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 66/233 (28%), Positives = 109/233 (46%)
Query: 143 LDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKG 202
L+L+++GI + + F + L L L++N + ++V G L L++L+L + L
Sbjct: 91 LNLQENGIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNG--LPSLNTLELFDNRLT- 147
Query: 203 PLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCG-LSRLPANTFHRF 261
+ AF +KLR L+L NP+ + S A + L RL L L + F
Sbjct: 148 TVPTQAFEYLSKLRELWLRNNPIESIP-SYAFNRVPSLRRLDLGELKRLEYISEAAFEGL 206
Query: 262 TCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNK 321
L+ L++ L D L+ L LE L++ + L I +F +TSL+ L L +
Sbjct: 207 VNLRYLNLGMCNLKDIPN--LTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQ 264
Query: 322 LETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLH 374
+ T+E F +L L L L++ L L +F + LE + L+ NP H
Sbjct: 265 VATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHR---LERVHLNHNPWH 314
Score = 157 (60.3 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 73/256 (28%), Positives = 116/256 (45%)
Query: 22 INLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIE 80
+ L+ N ++ +E GAF SL L + + L+ + Q F L+ L +L L NP+ I
Sbjct: 115 LQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIP 174
Query: 81 PGVFDPLTSLEYLMLNRCN-LTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGK 139
F+ + SL L L L YIS +AF+ L +L+ L L LK + T ++ +
Sbjct: 175 SYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLKDIPNLTALV----R 230
Query: 140 LDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCH 199
L+ L+L + + + F T LR L L ++ ++ +L L+ L+LS+ +
Sbjct: 231 LEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIE--RNAFDDLKSLEELNLSHNN 288
Query: 200 LKGPLSEDAFVNATKLRTLYLSGNPLSA-AD---LSVALKPLTKLHRLSLRNCGLSRLPA 255
L L D F +L ++L+ NP D LS LK + C PA
Sbjct: 289 LMS-LPHDLFTPLHRLERVHLNHNPWHCNCDVLWLSWWLKETVPSNTTCCARC---HAPA 344
Query: 256 NTFHRFTCLQELDISH 271
R+ + ELD SH
Sbjct: 345 GLKGRY--IGELDQSH 358
Score = 129 (50.5 bits), Expect = 0.00012, P = 0.00012
Identities = 59/212 (27%), Positives = 95/212 (44%)
Query: 290 HLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRL 349
+L++ + +Q I TF + L+ L LS N + +E G F L L+ LEL + LT +
Sbjct: 90 YLNLQENGIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTV 149
Query: 350 NETVFHENYTYPDLEELRLSGNPLHVLPDST--KQYSMRTIPTQIWKNFDF--------L 399
F Y L EL L NP+ +P + S+R + K ++ L
Sbjct: 150 PTQAFE--YL-SKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGL 206
Query: 400 VILFILNETVFH----ENYT-YPDLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCK 454
V L LN + + N T LEEL LSGN L ++ G+ +
Sbjct: 207 VNLRYLNLGMCNLKDIPNLTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHA--Q 264
Query: 455 IDYLPPNVFNNTRNITSLNLANNNL-SMTSEL 485
+ + N F++ +++ LNL++NNL S+ +L
Sbjct: 265 VATIERNAFDDLKSLEELNLSHNNLMSLPHDL 296
Score = 126 (49.4 bits), Expect = 0.00026, P = 0.00026
Identities = 65/228 (28%), Positives = 97/228 (42%)
Query: 117 LELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELID 176
L L +N ++ + T +L L+ L L ++ + + F L L L +N L
Sbjct: 91 LNLQENGIQ--VIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTT 148
Query: 177 LDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLS-VALK 235
V T + L L L L N ++ + AF LR L L G +S A +
Sbjct: 149 --VPTQAFEYLSKLRELWLRNNPIES-IPSYAFNRVPSLRRLDL-GELKRLEYISEAAFE 204
Query: 236 PLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGY 295
L L L+L C L +P T L+EL++S N L L SL L + +
Sbjct: 205 GLVNLRYLNLGMCNLKDIPNLT--ALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMH 262
Query: 296 SNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNN 343
+ + I R+ F + SL+ L LS N L +L LF L L + LN+
Sbjct: 263 AQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNH 310
>UNIPROTKB|Q9NT99 [details] [associations]
symbol:LRRC4B "Leucine-rich repeat-containing protein 4B"
species:9606 "Homo sapiens" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0042734 "presynaptic
membrane" evidence=IEA] [GO:0051965 "positive regulation of synapse
assembly" evidence=ISS] InterPro:IPR001611 InterPro:IPR007110
InterPro:IPR026883 PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021
GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0030054
InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0042734
GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 EMBL:AC008743 InterPro:IPR026906
Pfam:PF13306 EMBL:BC019687 EMBL:BC056207 EMBL:AL137451
IPI:IPI00300241 PIR:T46266 RefSeq:NP_001073926.1 UniGene:Hs.120873
ProteinModelPortal:Q9NT99 SMR:Q9NT99 STRING:Q9NT99
PhosphoSite:Q9NT99 DMDM:91207142 PaxDb:Q9NT99 PRIDE:Q9NT99
DNASU:94030 Ensembl:ENST00000389201 GeneID:94030 KEGG:hsa:94030
UCSC:uc002pss.3 CTD:94030 GeneCards:GC19M051020 H-InvDB:HIX0015363
HGNC:HGNC:25042 neXtProt:NX_Q9NT99 PharmGKB:PA134890612
HOGENOM:HOG000252924 HOVERGEN:HBG052359 InParanoid:Q9NT99 KO:K16360
OMA:NNTTCCA OrthoDB:EOG4W9J3K ChiTaRS:LRRC4B GenomeRNAi:94030
NextBio:78327 ArrayExpress:Q9NT99 Bgee:Q9NT99 CleanEx:HS_LRRC4B
Genevestigator:Q9NT99 GermOnline:ENSG00000131409
PANTHER:PTHR24369:SF7 Uniprot:Q9NT99
Length = 713
Score = 223 (83.6 bits), Expect = 7.6e-15, P = 7.6e-15
Identities = 72/228 (31%), Positives = 114/228 (50%)
Query: 69 LDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHI 128
L+L N +++I F L LE L L++ + I AF+ L L TLEL N+L + +
Sbjct: 91 LNLQENGIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTT-V 149
Query: 129 DWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLV 188
T L KL L LR + I ++P F LR L+L E + ++ ++ + LV
Sbjct: 150 P-TQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEY-ISEAAFEGLV 207
Query: 189 HLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNC 248
+L L+L C+LK + A V +L L LSGN L + + LT L +L L +
Sbjct: 208 NLRYLNLGMCNLKDIPNLTALV---RLEELELSGNRLDLIRPG-SFQGLTSLRKLWLMHA 263
Query: 249 GLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYS 296
++ + N F L+EL++SHN L+ L +PL LE + + ++
Sbjct: 264 QVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHN 311
Score = 191 (72.3 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 71/231 (30%), Positives = 109/231 (47%)
Query: 44 YLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYI 103
YL +QE + I F +L L L LS N +R IE G F+ L SL L L LT +
Sbjct: 90 YLNLQENGIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTV 149
Query: 104 SPSAFDNLNHLKTLELSQNKLKSHIDWTLV-LGNLGKLDTLDLRQSGISNLPDNVFANNT 162
AF+ L+ L+ L L N ++S + + +L +LD +L++ + + + F
Sbjct: 150 PTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKR--LEYISEAAFEGLV 207
Query: 163 WLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSG 222
LR LNL L D+ T L V L+ L+LS L + +F T LR L+L
Sbjct: 208 NLRYLNLGMCNLKDIPNLTAL----VRLEELELSGNRLD-LIRPGSFQGLTSLRKLWLMH 262
Query: 223 NPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNP 273
++ + + A L L L+L + L LP + F L+ + ++HNP
Sbjct: 263 AQVATIERN-AFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHNP 312
Score = 165 (63.1 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 66/233 (28%), Positives = 109/233 (46%)
Query: 143 LDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKG 202
L+L+++GI + + F + L L L++N + ++V G L L++L+L + L
Sbjct: 91 LNLQENGIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNG--LPSLNTLELFDNRLT- 147
Query: 203 PLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCG-LSRLPANTFHRF 261
+ AF +KLR L+L NP+ + S A + L RL L L + F
Sbjct: 148 TVPTQAFEYLSKLRELWLRNNPIESIP-SYAFNRVPSLRRLDLGELKRLEYISEAAFEGL 206
Query: 262 TCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNK 321
L+ L++ L D L+ L LE L++ + L I +F +TSL+ L L +
Sbjct: 207 VNLRYLNLGMCNLKDIPN--LTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQ 264
Query: 322 LETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLH 374
+ T+E F +L L L L++ L L +F + LE + L+ NP H
Sbjct: 265 VATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHR---LERVHLNHNPWH 314
Score = 157 (60.3 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 73/256 (28%), Positives = 116/256 (45%)
Query: 22 INLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIE 80
+ L+ N ++ +E GAF SL L + + L+ + Q F L+ L +L L NP+ I
Sbjct: 115 LQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIP 174
Query: 81 PGVFDPLTSLEYLMLNRCN-LTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGK 139
F+ + SL L L L YIS +AF+ L +L+ L L LK + T ++ +
Sbjct: 175 SYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLKDIPNLTALV----R 230
Query: 140 LDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCH 199
L+ L+L + + + F T LR L L ++ ++ +L L+ L+LS+ +
Sbjct: 231 LEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIE--RNAFDDLKSLEELNLSHNN 288
Query: 200 LKGPLSEDAFVNATKLRTLYLSGNPLSA-AD---LSVALKPLTKLHRLSLRNCGLSRLPA 255
L L D F +L ++L+ NP D LS LK + C PA
Sbjct: 289 LMS-LPHDLFTPLHRLERVHLNHNPWHCNCDVLWLSWWLKETVPSNTTCCARC---HAPA 344
Query: 256 NTFHRFTCLQELDISH 271
R+ + ELD SH
Sbjct: 345 GLKGRY--IGELDQSH 358
Score = 133 (51.9 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 74/284 (26%), Positives = 122/284 (42%)
Query: 218 LYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDA 277
L+L PL A VA+ +C ++ +N R C + D++ P
Sbjct: 27 LWLFSPPLGAGGGGVAVTSAAGGGSPPATSCPVACSCSNQASRVICTRR-DLAEVP---- 81
Query: 278 FTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLS 337
A + P+ + +L++ + +Q I TF + L+ L LS N + +E G F L L+
Sbjct: 82 --ASI-PVNT-RYLNLQENGIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLN 137
Query: 338 VLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDST--KQYSMRTIPTQIWKN 395
LEL + LT + F Y L EL L NP+ +P + S+R + K
Sbjct: 138 TLELFDNRLTTVPTQAFE--YL-SKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKR 194
Query: 396 FDF--------LVILFILNETVFH----ENYT-YPDLEELRLSGNPLHVLPTGNXXXXXX 442
++ LV L LN + + N T LEEL LSGN L ++ G+
Sbjct: 195 LEYISEAAFEGLVNLRYLNLGMCNLKDIPNLTALVRLEELELSGNRLDLIRPGSFQGLTS 254
Query: 443 XXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNL-SMTSEL 485
++ + N F++ +++ LNL++NNL S+ +L
Sbjct: 255 LRKLWLMHA--QVATIERNAFDDLKSLEELNLSHNNLMSLPHDL 296
Score = 126 (49.4 bits), Expect = 0.00026, P = 0.00026
Identities = 65/228 (28%), Positives = 97/228 (42%)
Query: 117 LELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELID 176
L L +N ++ + T +L L+ L L ++ + + F L L L +N L
Sbjct: 91 LNLQENGIQ--VIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTT 148
Query: 177 LDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLS-VALK 235
V T + L L L L N ++ + AF LR L L G +S A +
Sbjct: 149 --VPTQAFEYLSKLRELWLRNNPIES-IPSYAFNRVPSLRRLDL-GELKRLEYISEAAFE 204
Query: 236 PLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGY 295
L L L+L C L +P T L+EL++S N L L SL L + +
Sbjct: 205 GLVNLRYLNLGMCNLKDIPNLT--ALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMH 262
Query: 296 SNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNN 343
+ + I R+ F + SL+ L LS N L +L LF L L + LN+
Sbjct: 263 AQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNH 310
>UNIPROTKB|F1PZW2 [details] [associations]
symbol:LRRC4B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051965 "positive regulation of synapse
assembly" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR001611 InterPro:IPR007110
InterPro:IPR026883 PROSITE:PS50835 PROSITE:PS51450
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 InterPro:IPR026906
Pfam:PF13306 GeneTree:ENSGT00690000101682 CTD:94030 KO:K16360
OMA:NNTTCCA PANTHER:PTHR24369:SF7 EMBL:AAEX03000782
EMBL:AAEX03000783 EMBL:AAEX03000784 EMBL:AAEX03000785
EMBL:AAEX03000786 RefSeq:XP_541477.2 Ensembl:ENSCAFT00000004749
GeneID:484361 KEGG:cfa:484361 Uniprot:F1PZW2
Length = 717
Score = 223 (83.6 bits), Expect = 7.7e-15, P = 7.7e-15
Identities = 72/228 (31%), Positives = 114/228 (50%)
Query: 69 LDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHI 128
L+L N +++I F L LE L L++ + I AF+ L L TLEL N+L + +
Sbjct: 91 LNLQENGIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTT-V 149
Query: 129 DWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLV 188
T L KL L LR + I ++P F LR L+L E + ++ ++ + LV
Sbjct: 150 P-TQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEY-ISEAAFEGLV 207
Query: 189 HLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNC 248
+L L+L C+LK + A V +L L LSGN L + + LT L +L L +
Sbjct: 208 NLRYLNLGMCNLKDIPNLTALV---RLEELELSGNRLDLIRPG-SFQGLTSLRKLWLMHA 263
Query: 249 GLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYS 296
++ + N F L+EL++SHN L+ L +PL LE + + ++
Sbjct: 264 QVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHN 311
Score = 191 (72.3 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 71/231 (30%), Positives = 109/231 (47%)
Query: 44 YLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYI 103
YL +QE + I F +L L L LS N +R IE G F+ L SL L L LT +
Sbjct: 90 YLNLQENGIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTV 149
Query: 104 SPSAFDNLNHLKTLELSQNKLKSHIDWTLV-LGNLGKLDTLDLRQSGISNLPDNVFANNT 162
AF+ L+ L+ L L N ++S + + +L +LD +L++ + + + F
Sbjct: 150 PTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKR--LEYISEAAFEGLV 207
Query: 163 WLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSG 222
LR LNL L D+ T L V L+ L+LS L + +F T LR L+L
Sbjct: 208 NLRYLNLGMCNLKDIPNLTAL----VRLEELELSGNRLD-LIRPGSFQGLTSLRKLWLMH 262
Query: 223 NPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNP 273
++ + + A L L L+L + L LP + F L+ + ++HNP
Sbjct: 263 AQVATIERN-AFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHNP 312
Score = 165 (63.1 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 66/233 (28%), Positives = 109/233 (46%)
Query: 143 LDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKG 202
L+L+++GI + + F + L L L++N + ++V G L L++L+L + L
Sbjct: 91 LNLQENGIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNG--LPSLNTLELFDNRLT- 147
Query: 203 PLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCG-LSRLPANTFHRF 261
+ AF +KLR L+L NP+ + S A + L RL L L + F
Sbjct: 148 TVPTQAFEYLSKLRELWLRNNPIESIP-SYAFNRVPSLRRLDLGELKRLEYISEAAFEGL 206
Query: 262 TCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNK 321
L+ L++ L D L+ L LE L++ + L I +F +TSL+ L L +
Sbjct: 207 VNLRYLNLGMCNLKDIPN--LTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQ 264
Query: 322 LETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLH 374
+ T+E F +L L L L++ L L +F + LE + L+ NP H
Sbjct: 265 VATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHR---LERVHLNHNPWH 314
Score = 157 (60.3 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 73/256 (28%), Positives = 116/256 (45%)
Query: 22 INLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIE 80
+ L+ N ++ +E GAF SL L + + L+ + Q F L+ L +L L NP+ I
Sbjct: 115 LQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIP 174
Query: 81 PGVFDPLTSLEYLMLNRCN-LTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGK 139
F+ + SL L L L YIS +AF+ L +L+ L L LK + T ++ +
Sbjct: 175 SYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLKDIPNLTALV----R 230
Query: 140 LDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCH 199
L+ L+L + + + F T LR L L ++ ++ +L L+ L+LS+ +
Sbjct: 231 LEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIE--RNAFDDLKSLEELNLSHNN 288
Query: 200 LKGPLSEDAFVNATKLRTLYLSGNPLSA-AD---LSVALKPLTKLHRLSLRNCGLSRLPA 255
L L D F +L ++L+ NP D LS LK + C PA
Sbjct: 289 LMS-LPHDLFTPLHRLERVHLNHNPWHCNCDVLWLSWWLKETVPSNTTCCARC---HAPA 344
Query: 256 NTFHRFTCLQELDISH 271
R+ + ELD SH
Sbjct: 345 GLKGRY--IGELDQSH 358
Score = 129 (50.5 bits), Expect = 0.00012, P = 0.00012
Identities = 59/212 (27%), Positives = 95/212 (44%)
Query: 290 HLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRL 349
+L++ + +Q I TF + L+ L LS N + +E G F L L+ LEL + LT +
Sbjct: 90 YLNLQENGIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTV 149
Query: 350 NETVFHENYTYPDLEELRLSGNPLHVLPDST--KQYSMRTIPTQIWKNFDF--------L 399
F Y L EL L NP+ +P + S+R + K ++ L
Sbjct: 150 PTQAFE--YL-SKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGL 206
Query: 400 VILFILNETVFH----ENYT-YPDLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCK 454
V L LN + + N T LEEL LSGN L ++ G+ +
Sbjct: 207 VNLRYLNLGMCNLKDIPNLTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHA--Q 264
Query: 455 IDYLPPNVFNNTRNITSLNLANNNL-SMTSEL 485
+ + N F++ +++ LNL++NNL S+ +L
Sbjct: 265 VATIERNAFDDLKSLEELNLSHNNLMSLPHDL 296
Score = 126 (49.4 bits), Expect = 0.00026, P = 0.00026
Identities = 65/228 (28%), Positives = 97/228 (42%)
Query: 117 LELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELID 176
L L +N ++ + T +L L+ L L ++ + + F L L L +N L
Sbjct: 91 LNLQENGIQ--VIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTT 148
Query: 177 LDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLS-VALK 235
V T + L L L L N ++ + AF LR L L G +S A +
Sbjct: 149 --VPTQAFEYLSKLRELWLRNNPIES-IPSYAFNRVPSLRRLDL-GELKRLEYISEAAFE 204
Query: 236 PLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGY 295
L L L+L C L +P T L+EL++S N L L SL L + +
Sbjct: 205 GLVNLRYLNLGMCNLKDIPNLT--ALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMH 262
Query: 296 SNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNN 343
+ + I R+ F + SL+ L LS N L +L LF L L + LN+
Sbjct: 263 AQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNH 310
>UNIPROTKB|I3LJI7 [details] [associations]
symbol:LRRC4B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051965 "positive regulation of synapse assembly"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
InterPro:IPR001611 InterPro:IPR007110 InterPro:IPR026883
PROSITE:PS50835 PROSITE:PS51450 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 OMA:NNTTCCA PANTHER:PTHR24369:SF7
EMBL:FP102476 EMBL:FP102472 Ensembl:ENSSSCT00000029477
Uniprot:I3LJI7
Length = 721
Score = 223 (83.6 bits), Expect = 7.7e-15, P = 7.7e-15
Identities = 72/228 (31%), Positives = 114/228 (50%)
Query: 69 LDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHI 128
L+L N +++I F L LE L L++ + I AF+ L L TLEL N+L + +
Sbjct: 91 LNLQENGIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTT-V 149
Query: 129 DWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLV 188
T L KL L LR + I ++P F LR L+L E + ++ ++ + LV
Sbjct: 150 P-TQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEY-ISEAAFEGLV 207
Query: 189 HLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNC 248
+L L+L C+LK + A V +L L LSGN L + + LT L +L L +
Sbjct: 208 NLRYLNLGMCNLKDIPNLTALV---RLEELELSGNRLDLIRPG-SFQGLTSLRKLWLMHA 263
Query: 249 GLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYS 296
++ + N F L+EL++SHN L+ L +PL LE + + ++
Sbjct: 264 QVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHN 311
Score = 191 (72.3 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 71/231 (30%), Positives = 109/231 (47%)
Query: 44 YLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYI 103
YL +QE + I F +L L L LS N +R IE G F+ L SL L L LT +
Sbjct: 90 YLNLQENGIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTV 149
Query: 104 SPSAFDNLNHLKTLELSQNKLKSHIDWTLV-LGNLGKLDTLDLRQSGISNLPDNVFANNT 162
AF+ L+ L+ L L N ++S + + +L +LD +L++ + + + F
Sbjct: 150 PTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKR--LEYISEAAFEGLV 207
Query: 163 WLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSG 222
LR LNL L D+ T L V L+ L+LS L + +F T LR L+L
Sbjct: 208 NLRYLNLGMCNLKDIPNLTAL----VRLEELELSGNRLD-LIRPGSFQGLTSLRKLWLMH 262
Query: 223 NPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNP 273
++ + + A L L L+L + L LP + F L+ + ++HNP
Sbjct: 263 AQVATIERN-AFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHNP 312
Score = 165 (63.1 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 66/233 (28%), Positives = 109/233 (46%)
Query: 143 LDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKG 202
L+L+++GI + + F + L L L++N + ++V G L L++L+L + L
Sbjct: 91 LNLQENGIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNG--LPSLNTLELFDNRLT- 147
Query: 203 PLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCG-LSRLPANTFHRF 261
+ AF +KLR L+L NP+ + S A + L RL L L + F
Sbjct: 148 TVPTQAFEYLSKLRELWLRNNPIESIP-SYAFNRVPSLRRLDLGELKRLEYISEAAFEGL 206
Query: 262 TCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNK 321
L+ L++ L D L+ L LE L++ + L I +F +TSL+ L L +
Sbjct: 207 VNLRYLNLGMCNLKDIPN--LTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQ 264
Query: 322 LETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLH 374
+ T+E F +L L L L++ L L +F + LE + L+ NP H
Sbjct: 265 VATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHR---LERVHLNHNPWH 314
Score = 157 (60.3 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 73/256 (28%), Positives = 116/256 (45%)
Query: 22 INLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIE 80
+ L+ N ++ +E GAF SL L + + L+ + Q F L+ L +L L NP+ I
Sbjct: 115 LQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIP 174
Query: 81 PGVFDPLTSLEYLMLNRCN-LTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGK 139
F+ + SL L L L YIS +AF+ L +L+ L L LK + T ++ +
Sbjct: 175 SYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLKDIPNLTALV----R 230
Query: 140 LDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCH 199
L+ L+L + + + F T LR L L ++ ++ +L L+ L+LS+ +
Sbjct: 231 LEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIE--RNAFDDLKSLEELNLSHNN 288
Query: 200 LKGPLSEDAFVNATKLRTLYLSGNPLSA-AD---LSVALKPLTKLHRLSLRNCGLSRLPA 255
L L D F +L ++L+ NP D LS LK + C PA
Sbjct: 289 LMS-LPHDLFTPLHRLERVHLNHNPWHCNCDVLWLSWWLKETVPSNTTCCARC---HAPA 344
Query: 256 NTFHRFTCLQELDISH 271
R+ + ELD SH
Sbjct: 345 GLKGRY--IGELDQSH 358
Score = 130 (50.8 bits), Expect = 9.8e-05, P = 9.8e-05
Identities = 74/284 (26%), Positives = 121/284 (42%)
Query: 218 LYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDA 277
L+L PL A VAL +C + +N R C + +++ P
Sbjct: 27 LWLFSPPLGAGGGGVALTSAAGGGSPPATSCPAACSCSNQASRVICTRR-ELAEVP---- 81
Query: 278 FTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLS 337
A + P+ + +L++ + +Q I TF + L+ L LS N + +E G F L L+
Sbjct: 82 --ASI-PVNT-RYLNLQENGIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLN 137
Query: 338 VLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDST--KQYSMRTIPTQIWKN 395
LEL + LT + F Y L EL L NP+ +P + S+R + K
Sbjct: 138 TLELFDNRLTTVPTQAFE--YL-SKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKR 194
Query: 396 FDF--------LVILFILNETVFH----ENYT-YPDLEELRLSGNPLHVLPTGNXXXXXX 442
++ LV L LN + + N T LEEL LSGN L ++ G+
Sbjct: 195 LEYISEAAFEGLVNLRYLNLGMCNLKDIPNLTALVRLEELELSGNRLDLIRPGSFQGLTS 254
Query: 443 XXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNL-SMTSEL 485
++ + N F++ +++ LNL++NNL S+ +L
Sbjct: 255 LRKLWLMHA--QVATIERNAFDDLKSLEELNLSHNNLMSLPHDL 296
Score = 126 (49.4 bits), Expect = 0.00027, P = 0.00027
Identities = 65/228 (28%), Positives = 97/228 (42%)
Query: 117 LELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELID 176
L L +N ++ + T +L L+ L L ++ + + F L L L +N L
Sbjct: 91 LNLQENGIQ--VIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTT 148
Query: 177 LDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLS-VALK 235
V T + L L L L N ++ + AF LR L L G +S A +
Sbjct: 149 --VPTQAFEYLSKLRELWLRNNPIES-IPSYAFNRVPSLRRLDL-GELKRLEYISEAAFE 204
Query: 236 PLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGY 295
L L L+L C L +P T L+EL++S N L L SL L + +
Sbjct: 205 GLVNLRYLNLGMCNLKDIPNLT--ALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMH 262
Query: 296 SNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNN 343
+ + I R+ F + SL+ L LS N L +L LF L L + LN+
Sbjct: 263 AQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNH 310
>MGI|MGI:2679448 [details] [associations]
symbol:Slitrk5 "SLIT and NTRK-like family, member 5"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0007268 "synaptic transmission" evidence=IMP]
[GO:0007409 "axonogenesis" evidence=IDA] [GO:0007625 "grooming
behavior" evidence=IMP] [GO:0009410 "response to xenobiotic
stimulus" evidence=IMP] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=ISS] [GO:0021756
"striatum development" evidence=IMP] [GO:0030534 "adult behavior"
evidence=IMP] [GO:0043588 "skin development" evidence=IMP]
[GO:0048813 "dendrite morphogenesis" evidence=IMP] [GO:0072358
"cardiovascular system development" evidence=IMP] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:2679448 GO:GO:0016021
GO:GO:0043588 GO:GO:0007268 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0048813 GO:GO:0007409
GO:GO:0030534 GO:GO:0009410 InterPro:IPR000372 SMART:SM00013
GO:GO:0007625 GO:GO:0021756 GO:GO:0072358 HOGENOM:HOG000290667
HOVERGEN:HBG056407 GeneTree:ENSGT00680000099775 eggNOG:NOG147171
CTD:26050 OMA:HHRGPAL OrthoDB:EOG4X97GH EMBL:AB097574 EMBL:BC065107
EMBL:AK011457 IPI:IPI00329844 IPI:IPI00410889 RefSeq:NP_942565.1
UniGene:Mm.235097 UniGene:Mm.417152 ProteinModelPortal:Q810B7
SMR:Q810B7 STRING:Q810B7 PhosphoSite:Q810B7 PRIDE:Q810B7
Ensembl:ENSMUST00000042767 GeneID:75409 KEGG:mmu:75409
UCSC:uc011zpr.1 InParanoid:Q810B7 NextBio:342932 Bgee:Q810B7
CleanEx:MM_SLITRK5 Genevestigator:Q810B7
GermOnline:ENSMUSG00000033214 Uniprot:Q810B7
Length = 957
Score = 151 (58.2 bits), Expect = 5.0e-10, Sum P(2) = 5.0e-10
Identities = 108/438 (24%), Positives = 185/438 (42%)
Query: 18 GLITINLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPL 76
G ++L +N IQ +E GAF R L L++ L + F L L L + N +
Sbjct: 106 GASILHLGSNVIQDIETGAFHGLRGLRRLHLNNNKLELLRDDTFLGLENLEYLQVDYNYI 165
Query: 77 RIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGN 136
+IEP F L L+ L+LN NL P+ L L+L N+LK + + +L +
Sbjct: 166 SVIEPNAFGKLHMLQVLILND-NLLSGLPNNLFRFVPLTHLDLRGNRLKL-LPYVGLLQH 223
Query: 137 LGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELI-DLDVATTLGQNLVHLDSLDL 195
+ K+ L L ++ N + + WL +++ + L+ D+ T + LD +
Sbjct: 224 MDKVVELQLEENPW-NCSCELISLKDWLDSISYSA--LVGDVVCETPFRLHGRDLDEVSK 280
Query: 196 SNCHLKGPLSEDAFVNATKLRTL-YLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLP 254
+ +S+ T L T YL P S SVA + +++ L+ +R P
Sbjct: 281 QELCPRKLISDYEMRPQTPLSTTGYLHTTPASVN--SVATSS-SAVYKPPLKPPKGTRQP 337
Query: 255 ANTFHRFTCLQ---ELDIS-HNPLIDAFTALLSPLE-------SLEHLDMGYS-NLQ--R 300
R T Q +L S + P I T PLE +L+ D+G + N Q +
Sbjct: 338 NKPRVRPTSRQPSKDLGYSNYGPSIAYQTKSPVPLECPTACTCNLQISDLGLNVNCQERK 397
Query: 301 ISRSTFL--KMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENY 358
I L K + K + L+ N + + F T L +L L N ++ + + F +
Sbjct: 398 IESIAELQPKPYNPKKMYLTENYITVVRRTDFLEATGLDLLHLGNNRISMIQDRAFGD-- 455
Query: 359 TYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYT-YP 417
+L L L+GN + L Y ++++ +L + + L + + P
Sbjct: 456 -LGNLRRLYLNGNRIERLSPELF-YGLQSL--------QYLFLQYNLIREIQAGTFDPVP 505
Query: 418 DLEELRLSGNPLHVLPTG 435
+L+ L L+ N L +P+G
Sbjct: 506 NLQLLFLNNNQLQAMPSG 523
Score = 130 (50.8 bits), Expect = 2.9e-07, Sum P(3) = 2.9e-07
Identities = 48/167 (28%), Positives = 73/167 (43%)
Query: 230 LSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLE 289
LS P ++ L L LSRL N F +T L + N + D T L L
Sbjct: 73 LSEISPPRFPIYHLLLSGNLLSRLYPNEFVNYTGASILHLGSNVIQDIETGAFHGLRGLR 132
Query: 290 HLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRL 349
L + + L+ + TFL + +L+ L + N + +E F L L VL LN+ L+ L
Sbjct: 133 RLHLNNNKLELLRDDTFLGLENLEYLQVDYNYISVIEPNAFGKLHMLQVLILNDNLLSGL 192
Query: 350 NETVFHENYTYPDLEELRLSGNPLHVLPD-STKQYSMRTIPTQIWKN 395
+F + L L L GN L +LP Q+ + + Q+ +N
Sbjct: 193 PNNLFR----FVPLTHLDLRGNRLKLLPYVGLLQHMDKVVELQLEEN 235
Score = 127 (49.8 bits), Expect = 8.0e-15, Sum P(3) = 8.0e-15
Identities = 45/160 (28%), Positives = 72/160 (45%)
Query: 15 DNPGLITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGN 74
+ G++T++ I + + +L + LS++ P F N T + L L N
Sbjct: 56 EKDGILTVSCENRGIISLSEISPPRFPIYHLLLSGNLLSRLYPNEFVNYTGASILHLGSN 115
Query: 75 PLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVL 134
++ IE G F L L L LN L + F L +L+ L++ N + S I+
Sbjct: 116 VIQDIETGAFHGLRGLRRLHLNNNKLELLRDDTFLGLENLEYLQVDYNYI-SVIEPN-AF 173
Query: 135 GNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENEL 174
G L L L L + +S LP+N+F L +L+L N L
Sbjct: 174 GKLHMLQVLILNDNLLSGLPNNLF-RFVPLTHLDLRGNRL 212
Score = 127 (49.8 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 45/151 (29%), Positives = 67/151 (44%)
Query: 45 LYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYIS 104
+Y+ E ++ + F T L+ L L N + +I+ F L +L L LN + +S
Sbjct: 414 MYLTENYITVVRRTDFLEATGLDLLHLGNNRISMIQDRAFGDLGNLRRLYLNGNRIERLS 473
Query: 105 PSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWL 164
P F L L+ L L N ++ T + L L L + + +P VF+ T L
Sbjct: 474 PELFYGLQSLQYLFLQYNLIREIQAGTF--DPVPNLQLLFLNNNQLQAMPSGVFSGLTLL 531
Query: 165 RNLNLAENELIDLDVATTLGQNLVHLDSLDL 195
R LNL N L V+ L Q L L +DL
Sbjct: 532 R-LNLRGNSFTSLPVSGVLDQ-LTSLIQIDL 560
Score = 123 (48.4 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 43/138 (31%), Positives = 69/138 (50%)
Query: 36 FLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLML 95
FL A L L++ +S I + F +L L +L L+GN + + P +F L SL+YL L
Sbjct: 429 FLEATGLDLLHLGNNRISMIQDRAFGDLGNLRRLYLNGNRIERLSPELFYGLQSLQYLFL 488
Query: 96 NRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLP- 154
+ I FD + +L+ L L+ N+L++ V L L L+LR + ++LP
Sbjct: 489 QYNLIREIQAGTFDPVPNLQLLFLNNNQLQAMPSG--VFSGLTLL-RLNLRGNSFTSLPV 545
Query: 155 DNVFANNTWLRNLNLAEN 172
V T L ++L +N
Sbjct: 546 SGVLDQLTSLIQIDLHDN 563
Score = 117 (46.2 bits), Expect = 8.0e-15, Sum P(3) = 8.0e-15
Identities = 43/157 (27%), Positives = 75/157 (47%)
Query: 216 RTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLI 275
+ +YL+ N ++ + L+ T L L L N +S + F L+ L ++ N +
Sbjct: 412 KKMYLTENYITVVRRTDFLEA-TGLDLLHLGNNRISMIQDRAFGDLGNLRRLYLNGNRIE 470
Query: 276 DAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTH 335
L L+SL++L + Y+ ++ I TF + +L+ L L+ N+L+ + SG+F LT
Sbjct: 471 RLSPELFYGLQSLQYLFLQYNLIREIQAGTFDPVPNLQLLFLNNNQLQAMPSGVFSGLTL 530
Query: 336 LSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNP 372
L L L T L + + T L ++ L NP
Sbjct: 531 LR-LNLRGNSFTSLPVSGVLDQLT--SLIQIDLHDNP 564
Score = 105 (42.0 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 45/145 (31%), Positives = 66/145 (45%)
Query: 150 ISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAF 209
+S L N F N T L+L N + D++ G L L L L+N L+ L +D F
Sbjct: 93 LSRLYPNEFVNYTGASILHLGSNVIQDIETGAFHG--LRGLRRLHLNNNKLE-LLRDDTF 149
Query: 210 VNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDI 269
+ L L + N +S + + A L L L L + LS LP N F RF L LD+
Sbjct: 150 LGLENLEYLQVDYNYISVIEPN-AFGKLHMLQVLILNDNLLSGLPNNLF-RFVPLTHLDL 207
Query: 270 SHNPL-IDAFTALLSPLESLEHLDM 293
N L + + LL ++ + L +
Sbjct: 208 RGNRLKLLPYVGLLQHMDKVVELQL 232
Score = 104 (41.7 bits), Expect = 2.0e-12, Sum P(3) = 2.0e-12
Identities = 41/136 (30%), Positives = 64/136 (47%)
Query: 19 LITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRI 78
L++ NL + + P E S+L+L + I F L L +L L+ N L +
Sbjct: 87 LLSGNLLSR-LYPNEFVNYTGASILHLGSN--VIQDIETGAFHGLRGLRRLHLNNNKLEL 143
Query: 79 IEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLG 138
+ F L +LEYL ++ ++ I P+AF L+ L+ L L+ N L S + L
Sbjct: 144 LRDDTFLGLENLEYLQVDYNYISVIEPNAFGKLHMLQVLILNDNLL-SGLPNNLF--RFV 200
Query: 139 KLDTLDLRQSGISNLP 154
L LDLR + + LP
Sbjct: 201 PLTHLDLRGNRLKLLP 216
Score = 80 (33.2 bits), Expect = 8.0e-15, Sum P(3) = 8.0e-15
Identities = 26/79 (32%), Positives = 36/79 (45%)
Query: 513 VLRHNRAITSIKLVGNPWKCDCNIADMWEWATREKGDIGVLVGST---TPTEIGFGASRK 569
VL ++ I L NPW C C++ M W + K +GVLV P + R
Sbjct: 548 VLDQLTSLIQIDLHDNPWDCTCDVVGMKLWIEQLK--VGVLVDEVICKAPKKFAETYMRS 605
Query: 570 -KKGLVC--YFDIF-TTPT 584
K L+C Y D+ +TPT
Sbjct: 606 IKSELLCPDYSDVVVSTPT 624
Score = 74 (31.1 bits), Expect = 1.9e-10, Sum P(3) = 1.9e-10
Identities = 40/133 (30%), Positives = 63/133 (47%)
Query: 190 LDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVAL-KPLTKLHRLSLRNC 248
LD L L N + + + AF + LR LYL+GN + LS L L L L L+
Sbjct: 435 LDLLHLGNNRIS-MIQDRAFGDLGNLRRLYLNGNRIER--LSPELFYGLQSLQYLFLQYN 491
Query: 249 GLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFL- 307
+ + A TF LQ L +++N L + + S L +L L++ ++ + S L
Sbjct: 492 LIREIQAGTFDPVPNLQLLFLNNNQLQAMPSGVFSGL-TLLRLNLRGNSFTSLPVSGVLD 550
Query: 308 KMTSLKTLILSGN 320
++TSL + L N
Sbjct: 551 QLTSLIQIDLHDN 563
Score = 39 (18.8 bits), Expect = 2.9e-07, Sum P(3) = 2.9e-07
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 463 FNNTRNITSLNLANNNLSMTSELSF 487
F + L+L NN +SM + +F
Sbjct: 429 FLEATGLDLLHLGNNRISMIQDRAF 453
>FB|FBgn0034083 [details] [associations]
symbol:lbk "lambik" species:7227 "Drosophila melanogaster"
[GO:0048477 "oogenesis" evidence=IMP] [GO:0008407 "chaeta
morphogenesis" evidence=IMP] InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 EMBL:AE013599 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101816 RefSeq:NP_611091.2
ProteinModelPortal:A1ZAB1 SMR:A1ZAB1 STRING:A1ZAB1 PaxDb:A1ZAB1
EnsemblMetazoa:FBtr0302084 GeneID:36788 KEGG:dme:Dmel_CG8434
UCSC:CG8434-RA CTD:36788 FlyBase:FBgn0034083 eggNOG:NOG329771
InParanoid:A1ZAB1 OMA:LEINWST OrthoDB:EOG4T4B98 GenomeRNAi:36788
NextBio:800384 Bgee:A1ZAB1 Uniprot:A1ZAB1
Length = 1252
Score = 226 (84.6 bits), Expect = 8.3e-15, P = 8.3e-15
Identities = 103/376 (27%), Positives = 161/376 (42%)
Query: 18 GLITINLNANPIQPVEGAFLVARSLLY-LYMQECTLSKINPQFFTNLTTLNKLDLSGNPL 76
GL + L N I + L A LL L + L I F L L LS N +
Sbjct: 338 GLKHLVLANNHITSISSESLAALPLLRTLDLSRNKLHTIELNSFPKSNNLVHLILSFNEI 397
Query: 77 RIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGN 136
+ F L +L L L+ L+ + F NLN LK L L+ N+L+ I+W+ G
Sbjct: 398 TNVNEHSFATLNNLTDLELSNNRLSTLPIRVFKNLNQLKKLALNFNQLE--INWSTFRG- 454
Query: 137 LGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLS 196
L + L L+ + I L D VF + ++LA N++ L NL L L+LS
Sbjct: 455 LESMKNLQLKSNKIRALQDGVFYVMHKIETIDLAMNQISSLSRQGLF--NLTKLRHLNLS 512
Query: 197 NCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPAN 256
+ + D + L L LS N ++ L L +L L+L + L L N
Sbjct: 513 -FNAISRIEVDTWEFTQSLEVLDLSNNAINEFKPQ-HLDCLHRLKTLNLAHNRLQYLQEN 570
Query: 257 TFHRFTCLQELDISHNPL---ID--AFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTS 311
TF L+EL++ N L I+ + A L L LD+ +NL++IS + +
Sbjct: 571 TFDCVKNLEELNLRRNRLSWIIEDQSAAAPFKGLRKLRRLDLHGNNLKQISTKAMSGLNN 630
Query: 312 LKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYT---YPDLEELRL 368
L+ L L N L +++ F+++ L+ L + + V+ + + +P E +
Sbjct: 631 LEILNLGSNALASIQVNAFEHMLRLNKLVFKSLNFICDCDLVWFQQWLKNRFPQQAEHAV 690
Query: 369 SGNPLHVLPDSTKQYS 384
G P H+L K S
Sbjct: 691 CGYPEHLLDRHLKSLS 706
Score = 224 (83.9 bits), Expect = 9.2e-14, Sum P(2) = 9.2e-14
Identities = 91/349 (26%), Positives = 158/349 (45%)
Query: 12 RNLDNPGLITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDL 71
RNL N L ++L N ++ + F+ L +L + ++ I+ + L L LDL
Sbjct: 312 RNLLN--LTKVSLKRNLLEVIP-KFIGLSGLKHLVLANNHITSISSESLAALPLLRTLDL 368
Query: 72 SGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWT 131
S N L IE F +L +L+L+ +T ++ +F LN+L LELS N+L S +
Sbjct: 369 SRNKLHTIELNSFPKSNNLVHLILSFNEITNVNEHSFATLNNLTDLELSNNRL-STLP-I 426
Query: 132 LVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVH-L 190
V NL +L L L + + + + F ++NL L N++ L ++H +
Sbjct: 427 RVFKNLNQLKKLALNFNQLE-INWSTFRGLESMKNLQLKSNKIRALQDGVFY---VMHKI 482
Query: 191 DSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGL 250
+++DL+ + LS N TKLR L LS N +S ++ + L L L N +
Sbjct: 483 ETIDLAMNQISS-LSRQGLFNLTKLRHLNLSFNAISRIEVDT-WEFTQSLEVLDLSNNAI 540
Query: 251 SRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRI-----SRST 305
+ L+ L+++HN L +++LE L++ + L I + +
Sbjct: 541 NEFKPQHLDCLHRLKTLNLAHNRLQYLQENTFDCVKNLEELNLRRNRLSWIIEDQSAAAP 600
Query: 306 FLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVF 354
F + L+ L L GN L+ + + L +L +L L + L + F
Sbjct: 601 FKGLRKLRRLDLHGNNLKQISTKAMSGLNNLEILNLGSNALASIQVNAF 649
Score = 180 (68.4 bits), Expect = 7.8e-10, P = 7.8e-10
Identities = 73/265 (27%), Positives = 131/265 (49%)
Query: 112 NHLKTLELSQNKLKSHIDWTLV-LGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLA 170
++++TL L+ NKL D T++ + NL L + L+++ + +P F + L++L LA
Sbjct: 291 SYVQTLHLANNKLN---DTTVLEIRNLLNLTKVSLKRNLLEVIPK--FIGLSGLKHLVLA 345
Query: 171 ENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADL 230
N + + + L L +LDLS L + ++F + L L LS N ++ +
Sbjct: 346 NNHITSISSESLAALPL--LRTLDLSRNKLH-TIELNSFPKSNNLVHLILSFNEITNVN- 401
Query: 231 SVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEH 290
+ L L L L N LS LP F L++L ++ N L + + LES+++
Sbjct: 402 EHSFATLNNLTDLELSNNRLSTLPIRVFKNLNQLKKLALNFNQL-EINWSTFRGLESMKN 460
Query: 291 LDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLE-SGLFQNLTHLSVLELNNCGLTRL 349
L + + ++ + F M ++T+ L+ N++ +L GLF NLT L L L+ ++R+
Sbjct: 461 LQLKSNKIRALQDGVFYVMHKIETIDLAMNQISSLSRQGLF-NLTKLRHLNLSFNAISRI 519
Query: 350 NETVFHENYTYPDLEELRLSGNPLH 374
+ +T LE L LS N ++
Sbjct: 520 EVDTWE--FTQ-SLEVLDLSNNAIN 541
Score = 141 (54.7 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 65/263 (24%), Positives = 103/263 (39%)
Query: 237 LTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYS 296
L+ L L L N ++ + + + L+ LD+S N L +L HL + ++
Sbjct: 336 LSGLKHLVLANNHITSISSESLAALPLLRTLDLSRNKLHTIELNSFPKSNNLVHLILSFN 395
Query: 297 NLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHE 356
+ ++ +F + +L L LS N+L TL +F+NL L L LN L +N + F
Sbjct: 396 EITNVNEHSFATLNNLTDLELSNNRLSTLPIRVFKNLNQLKKLALNFNQL-EINWSTFRG 454
Query: 357 NYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPT-QIWKN-FDFLVILFILNETVF-HEN 413
++ L+L N + L D Y M I T + N L + N T H N
Sbjct: 455 ---LESMKNLQLKSNKIRALQDGVF-YVMHKIETIDLAMNQISSLSRQGLFNLTKLRHLN 510
Query: 414 YTYPDLEELRLSG----NPLHVLPTGNXXXXXXXXXXXXXXXXCK--------IDYLPPN 461
++ + + + L VL N K + YL N
Sbjct: 511 LSFNAISRIEVDTWEFTQSLEVLDLSNNAINEFKPQHLDCLHRLKTLNLAHNRLQYLQEN 570
Query: 462 VFNNTRNITSLNLANNNLSMTSE 484
F+ +N+ LNL N LS E
Sbjct: 571 TFDCVKNLEELNLRRNRLSWIIE 593
Score = 139 (54.0 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 54/215 (25%), Positives = 101/215 (46%)
Query: 162 TWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLS 221
++++ L+LA N+L D V +NL++L + L +L + + F+ + L+ L L+
Sbjct: 291 SYVQTLHLANNKLNDTTVLEI--RNLLNLTKVSLKR-NLLEVIPK--FIGLSGLKHLVLA 345
Query: 222 GNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTAL 281
N +++ S +L L L L L L + N+F + L L +S N + +
Sbjct: 346 NNHITSIS-SESLAALPLLRTLDLSRNKLHTIELNSFPKSNNLVHLILSFNEITNVNEHS 404
Query: 282 LSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLEL 341
+ L +L L++ + L + F + LK L L+ N+LE + F+ L + L+L
Sbjct: 405 FATLNNLTDLELSNNRLSTLPIRVFKNLNQLKKLALNFNQLE-INWSTFRGLESMKNLQL 463
Query: 342 NNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVL 376
+ + L + VF Y +E + L+ N + L
Sbjct: 464 KSNKIRALQDGVF---YVMHKIETIDLAMNQISSL 495
Score = 135 (52.6 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 80/361 (22%), Positives = 140/361 (38%)
Query: 190 LDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCG 249
L L L+N H+ +S ++ LRTL LS N L +L+ K +H + N
Sbjct: 339 LKHLVLANNHITS-ISSESLAALPLLRTLDLSRNKLHTIELNSFPKSNNLVHLILSFN-E 396
Query: 250 LSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKM 309
++ + ++F L +L++S+N L + L L+ L + ++ L+ I+ STF +
Sbjct: 397 ITNVNEHSFATLNNLTDLELSNNRLSTLPIRVFKNLNQLKKLALNFNQLE-INWSTFRGL 455
Query: 310 TSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLN-ETVFHENYTYPDLEELRL 368
S+K L L NK+ L+ G+F + + ++L ++ L+ + +F N T L L L
Sbjct: 456 ESMKNLQLKSNKIRALQDGVFYVMHKIETIDLAMNQISSLSRQGLF--NLT--KLRHLNL 511
Query: 369 SGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTYPD----LEELRL 424
S N ++ I W+ L +L + N + + D L+ L L
Sbjct: 512 SFN------------AISRIEVDTWEFTQSLEVLDLSNNAINEFKPQHLDCLHRLKTLNL 559
Query: 425 SGNPLHVLP--TGNXXXXXXXXXXXXXXXXCKI-DYLPPNVFNNTRNITSLNLANNNLSM 481
+ N L L T + I D F R + L+L NNL
Sbjct: 560 AHNRLQYLQENTFDCVKNLEELNLRRNRLSWIIEDQSAAAPFKGLRKLRRLDLHGNNLK- 618
Query: 482 TSELSFQFXXXXXXXXXXXXXXXXXTHISPTVLRHNRAITSIKLVGNPWKCDCNIADMWE 541
++S + I H + + + CDC++ +
Sbjct: 619 --QISTKAMSGLNNLEILNLGSNALASIQVNAFEHMLRLNKLVFKSLNFICDCDLVWFQQ 676
Query: 542 W 542
W
Sbjct: 677 W 677
Score = 43 (20.2 bits), Expect = 9.2e-14, Sum P(2) = 9.2e-14
Identities = 15/55 (27%), Positives = 23/55 (41%)
Query: 333 LTHLSVLELNNCGLTRLNETVFHE-NYTYPDLEELRLSGNPLHV---LPDSTKQY 383
L H V+ C L L+ET + +P E + P+H+ PD + Y
Sbjct: 934 LVHQEVVVGRTCVLQCLSETANADFELEHPHREWFK-ENKPIHISPTAPDGDRYY 987
>UNIPROTKB|Q5T0V0 [details] [associations]
symbol:SLIT1 "Slit homolog 1 protein" species:9606 "Homo
sapiens" [GO:0005509 "calcium ion binding" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186
InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR025875 Pfam:PF12799 Pfam:PF02210
Pfam:PF12661 Pfam:PF01463 EMBL:AL442123 EMBL:AL512424
IPI:IPI00871419 UniGene:Hs.632082 HGNC:HGNC:11085
HOGENOM:HOG000116120 HOVERGEN:HBG057959 ChiTaRS:SLIT1 SMR:Q5T0V0
STRING:Q5T0V0 Ensembl:ENST00000371070 Uniprot:Q5T0V0
Length = 1461
Score = 213 (80.0 bits), Expect = 8.6e-15, Sum P(2) = 8.6e-15
Identities = 98/379 (25%), Positives = 162/379 (42%)
Query: 17 PGLIT-INLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGN 74
P +T I L N I+ + GAF R L + + +++I P F L +LN L L GN
Sbjct: 308 PETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGN 367
Query: 75 PLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVL 134
+ + GVF L +L+ L+LN + I P AF +L +L L L NK++S T
Sbjct: 368 KITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFT- 426
Query: 135 GNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLD 194
+L + TL L Q+ P N WL + L N + + L +
Sbjct: 427 -SLRAIQTLHLAQN-----PFICDCNLKWLADF-LRTNPIETSGARCASPRRLANKRIGQ 479
Query: 195 LSNCHLKGPLSEDAFVNATKLRTLYLSGN-----PLSA-ADLSV----ALKPLTKLHR-- 242
+ + + E F+ T+ L N P + +V +LK LTK+
Sbjct: 480 IKSKKFRCSAKEQYFIPGTEDYQLNSECNSDVVCPHKCRCEANVVECSSLK-LTKIPERI 538
Query: 243 ------LSLRNCGLSRLPAN-TFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGY 295
L L N +S L A F + T L+++++S+N + + S+ L +
Sbjct: 539 PQSTAELRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTA 598
Query: 296 SNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFH 355
+ L+ I F + L+TL+L N++ + + F L ++ +L L + +T ++ F
Sbjct: 599 NQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQITTVSPGAFD 658
Query: 356 ENYTYPDLEELRLSGNPLH 374
T L L L NP +
Sbjct: 659 ---TLQSLSTLNLLANPFN 674
Score = 180 (68.4 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 83/334 (24%), Positives = 137/334 (41%)
Query: 15 DNPGLITINLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSG 73
D L + LN N + + E F ++L L + E + I + F T L L L
Sbjct: 107 DMKELERLRLNRNQLHMLPELLFQNNQALSRLDLSENAIQAIPRKAFRGATDLKNLQLDK 166
Query: 74 NPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKL--KSHIDWT 131
N + IE G F L LE L LN N+T I S+F+++ L+T L N L H+ W
Sbjct: 167 NQISCIEEGAFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWL 226
Query: 132 LVLGNLGKLDTLDL--RQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVH 189
L + T+ L + SG ++L A + E + T +
Sbjct: 227 SQW--LRQRPTIGLFTQCSGPASLRGLNVAEVQKSEFSCSGQGEAGRVPTCTLSSGSCPA 284
Query: 190 LDSLD--LSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRN 247
+ + + +C KG + A + T + + L N + + A P KL R+ L N
Sbjct: 285 MCTCSNGIVDCRGKGLTAIPANLPET-MTEIRLELNGIKSIPPG-AFSPYRKLRRIDLSN 342
Query: 248 CGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFL 307
++ + + F L L + N + D + L +L+ L + + + I F
Sbjct: 343 NQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQ 402
Query: 308 KMTSLKTLILSGNKLETLESGLFQNLTHLSVLEL 341
+ +L L L NK+++L G F +L + L L
Sbjct: 403 DLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHL 436
Score = 179 (68.1 bits), Expect = 3.9e-11, Sum P(2) = 3.9e-11
Identities = 92/353 (26%), Positives = 149/353 (42%)
Query: 38 VARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNR 97
+ R+ L + +++I+ F L L L L N + +E G FD + LE L LNR
Sbjct: 59 IPRNTERLELNGNNITRIHKNDFAGLKQLRVLQLMENQIGAVERGAFDDMKELERLRLNR 118
Query: 98 CNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNV 157
L + F N L L+LS+N +++ I G L L L ++ IS + +
Sbjct: 119 NQLHMLPELLFQNNQALSRLDLSENAIQA-IPRKAFRGATD-LKNLQLDKNQISCIEEGA 176
Query: 158 FANNTWLRNLNLAENELIDLDVAT-----TLGQNLVHLDSLDLSNCHLKGPLSEDAFVNA 212
F L L L N + + V++ L +H + L +CHL LS+
Sbjct: 177 FRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHL-FCDCHLAW-LSQWLRQRP 234
Query: 213 TKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHN 272
T SG P S L+VA ++ G R+P T +C S N
Sbjct: 235 TIGLFTQCSG-PASLRGLNVAEVQKSEFSCSGQGEAG--RVPTCTLSSGSCPAMCTCS-N 290
Query: 273 PLIDA----FTALLSPL-ESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLES 327
++D TA+ + L E++ + + + ++ I F L+ + LS N++ +
Sbjct: 291 GIVDCRGKGLTAIPANLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAP 350
Query: 328 GLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVL-PDS 379
FQ L L+ L L +T L VF YT L+ L L+ N ++ + PD+
Sbjct: 351 DAFQGLRSLNSLVLYGNKITDLPRGVFGGLYT---LQLLLLNANKINCIRPDA 400
Score = 119 (46.9 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 30/93 (32%), Positives = 49/93 (52%)
Query: 282 LSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLEL 341
LS + L+ +D+ + + +S S+F M+ L TLILS N L+ + FQ L L +L L
Sbjct: 780 LSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSL 839
Query: 342 NNCGLTRLNETVFHENYTYPDLEELRLSGNPLH 374
+ ++ L E +F + L L + NPL+
Sbjct: 840 HGNDISTLQEGIFAD---VTSLSHLAIGANPLY 869
Score = 110 (43.8 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 27/81 (33%), Positives = 44/81 (54%)
Query: 261 FTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGN 320
F LQ +D+S+N + + + + L L + Y+ LQ I F + SL+ L L GN
Sbjct: 783 FKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLHGN 842
Query: 321 KLETLESGLFQNLTHLSVLEL 341
+ TL+ G+F ++T LS L +
Sbjct: 843 DISTLQEGIFADVTSLSHLAI 863
Score = 104 (41.7 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 34/107 (31%), Positives = 50/107 (46%)
Query: 19 LITINLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLR 77
L + L N I VE GAF + L L + L + F N L++LDLS N ++
Sbjct: 87 LRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLHMLPELLFQNNQALSRLDLSENAIQ 146
Query: 78 IIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKL 124
I F T L+ L L++ ++ I AF L L+ L L+ N +
Sbjct: 147 AIPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNI 193
Score = 84 (34.6 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 38/139 (27%), Positives = 59/139 (42%)
Query: 185 QNLVHLDSL-DLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRL 243
Q LD++ SN HL+ L + N T+L YL GN + + L L +
Sbjct: 736 QECACLDTVVRCSNKHLRA-LPKGIPKNVTEL---YLDGNQFTL--VPGQLSTFKYLQLV 789
Query: 244 SLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISR 303
L N +S L ++F + L L +S+N L L SL L + +++ +
Sbjct: 790 DLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLHGNDISTLQE 849
Query: 304 STFLKMTSLKTLILSGNKL 322
F +TSL L + N L
Sbjct: 850 GIFADVTSLSHLAIGANPL 868
Score = 66 (28.3 bits), Expect = 8.6e-15, Sum P(2) = 8.6e-15
Identities = 26/125 (20%), Positives = 46/125 (36%)
Query: 418 DLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANN 477
++ EL L GN ++P G KI L + F N +T+L L+ N
Sbjct: 762 NVTELYLDGNQFTLVP-GQLSTFKYLQLVDLSNN--KISSLSNSSFTNMSQLTTLILSYN 818
Query: 478 NLSMTSELSFQFXXXXXXXXXXXXXXXXXTHISPTVLRHNRAITSIKLVGNPWKCDCNIA 537
L L+FQ + + + +++ + + NP CDC++
Sbjct: 819 ALQCIPPLAFQ---GLRSLRLLSLHGNDISTLQEGIFADVTSLSHLAIGANPLYCDCHLR 875
Query: 538 DMWEW 542
+ W
Sbjct: 876 WLSSW 880
Score = 64 (27.6 bits), Expect = 4.9e-11, Sum P(2) = 4.9e-11
Identities = 31/116 (26%), Positives = 51/116 (43%)
Query: 315 LILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLH 374
L L GN+ TL G +L +++L+N ++ L+ + F N + L L LS N L
Sbjct: 766 LYLDGNQF-TLVPGQLSTFKYLQLVDLSNNKISSLSNSSF-TNMS--QLTTLILSYNALQ 821
Query: 375 VLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTYPDLEELRLSGNPLH 430
+P Q +R++ D + L E +F + L L + NPL+
Sbjct: 822 CIPPLAFQ-GLRSLRLLSLHGND----ISTLQEGIFAD---VTSLSHLAIGANPLY 869
>MGI|MGI:1315205 [details] [associations]
symbol:Slit2 "slit homolog 2 (Drosophila)" species:10090
"Mus musculus" [GO:0001656 "metanephros development" evidence=IMP]
[GO:0001657 "ureteric bud development" evidence=ISO] [GO:0001701
"in utero embryonic development" evidence=IMP] [GO:0001933
"negative regulation of protein phosphorylation" evidence=ISO]
[GO:0002042 "cell migration involved in sprouting angiogenesis"
evidence=ISO] [GO:0002689 "negative regulation of leukocyte
chemotaxis" evidence=ISO] [GO:0005095 "GTPase inhibitor activity"
evidence=ISO] [GO:0005102 "receptor binding" evidence=TAS]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005615 "extracellular
space" evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=ISO] [GO:0006935
"chemotaxis" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IMP;IDA]
[GO:0007411 "axon guidance" evidence=ISO;IGI;IMP;IDA] [GO:0008045
"motor neuron axon guidance" evidence=ISO] [GO:0008201 "heparin
binding" evidence=ISO] [GO:0008285 "negative regulation of cell
proliferation" evidence=IGI] [GO:0009986 "cell surface"
evidence=ISO] [GO:0010593 "negative regulation of lamellipodium
assembly" evidence=ISO] [GO:0010596 "negative regulation of
endothelial cell migration" evidence=ISO] [GO:0010629 "negative
regulation of gene expression" evidence=IGI] [GO:0014912 "negative
regulation of smooth muscle cell migration" evidence=ISO]
[GO:0016337 "cell-cell adhesion" evidence=IGI;IMP] [GO:0021772
"olfactory bulb development" evidence=IGI] [GO:0021836
"chemorepulsion involved in postnatal olfactory bulb interneuron
migration" evidence=ISO] [GO:0021972 "corticospinal neuron axon
guidance through spinal cord" evidence=ISO] [GO:0022029
"telencephalon cell migration" evidence=IGI] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=ISO] [GO:0030336 "negative regulation of cell
migration" evidence=ISO] [GO:0030837 "negative regulation of actin
filament polymerization" evidence=ISO] [GO:0031290 "retinal
ganglion cell axon guidance" evidence=ISO;IGI;IMP] [GO:0033563
"dorsal/ventral axon guidance" evidence=IGI;IMP] [GO:0035385
"Roundabout signaling pathway" evidence=ISO] [GO:0042803 "protein
homodimerization activity" evidence=ISO] [GO:0043065 "positive
regulation of apoptotic process" evidence=ISO] [GO:0043086
"negative regulation of catalytic activity" evidence=ISO]
[GO:0043116 "negative regulation of vascular permeability"
evidence=ISO] [GO:0043237 "laminin-1 binding" evidence=ISO]
[GO:0043394 "proteoglycan binding" evidence=ISO] [GO:0043395
"heparan sulfate proteoglycan binding" evidence=ISO] [GO:0045499
"chemorepellent activity" evidence=IMP] [GO:0048495 "Roundabout
binding" evidence=ISO] [GO:0048754 "branching morphogenesis of an
epithelial tube" evidence=ISO] [GO:0048812 "neuron projection
morphogenesis" evidence=IGI;IMP] [GO:0048846 "axon extension
involved in axon guidance" evidence=ISO] [GO:0050728 "negative
regulation of inflammatory response" evidence=ISO] [GO:0050919
"negative chemotaxis" evidence=ISO;IMP] [GO:0050929 "induction of
negative chemotaxis" evidence=ISO] [GO:0051058 "negative regulation
of small GTPase mediated signal transduction" evidence=ISO]
[GO:0060603 "mammary gland duct morphogenesis" evidence=IGI;IMP]
[GO:0060763 "mammary duct terminal end bud growth" evidence=IMP]
[GO:0070100 "negative regulation of chemokine-mediated signaling
pathway" evidence=ISO] [GO:0071504 "cellular response to heparin"
evidence=ISO] [GO:0071672 "negative regulation of smooth muscle
cell chemotaxis" evidence=ISO] [GO:0071676 "negative regulation of
mononuclear cell migration" evidence=ISO] [GO:0090024 "negative
regulation of neutrophil chemotaxis" evidence=ISO] [GO:0090027
"negative regulation of monocyte chemotaxis" evidence=ISO]
[GO:0090260 "negative regulation of retinal ganglion cell axon
guidance" evidence=ISO] [GO:0090288 "negative regulation of
cellular response to growth factor stimulus" evidence=ISO]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 MGI:MGI:1315205 GO:GO:0005737 GO:GO:0008285
GO:GO:0005615 GO:GO:0009986 GO:GO:0030308 GO:GO:0001701
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005102 GO:GO:0008201 GO:GO:0005509
GO:GO:0043116 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0043065 GO:GO:0008045 GO:GO:0071504
GO:GO:0005095 GO:GO:0016337 PROSITE:PS01186 GO:GO:0032870
GO:GO:0030837 GO:GO:0010629 InterPro:IPR003645 InterPro:IPR001791
Pfam:PF00054 SMART:SM00274 SMART:SM00282 PROSITE:PS50025
GO:GO:0071672 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0001656 GO:GO:0010596 GO:GO:0001657 GO:GO:0001933
GO:GO:0048754 GO:GO:0071676 GO:GO:0031290 InterPro:IPR006207
PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041 GO:GO:0048846
GO:GO:0021772 GO:GO:0060763 GO:GO:0070100 GO:GO:0090288
GO:GO:0022029 GO:GO:0033563 GO:GO:0045499 GO:GO:0002042
Pfam:PF01463 GO:GO:0010593 GO:GO:0051414
GeneTree:ENSGT00700000104083 GO:GO:0090260 GO:GO:0021836
GO:GO:0061364 HOVERGEN:HBG057959 CTD:9353 KO:K06839 GO:GO:0021972
GO:GO:0050929 GO:GO:0090024 GO:GO:0051058 EMBL:AF144628
EMBL:AC101004 EMBL:AC113542 EMBL:AC157351 EMBL:AF074960
EMBL:BC059267 IPI:IPI00128415 PIR:T42626 RefSeq:NP_848919.3
UniGene:Mm.289739 ProteinModelPortal:Q9R1B9 SMR:Q9R1B9
STRING:Q9R1B9 PhosphoSite:Q9R1B9 PRIDE:Q9R1B9
Ensembl:ENSMUST00000170109 GeneID:20563 KEGG:mmu:20563
UCSC:uc008xjo.2 InParanoid:Q9R1B9 OrthoDB:EOG4D7Z4T ChiTaRS:SLIT2
NextBio:298857 Bgee:Q9R1B9 CleanEx:MM_SLIT2 Genevestigator:Q9R1B9
Uniprot:Q9R1B9
Length = 1521
Score = 190 (71.9 bits), Expect = 9.1e-15, Sum P(2) = 9.1e-15
Identities = 83/331 (25%), Positives = 132/331 (39%)
Query: 22 INLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIE 80
+ LN N +Q E FL L L + E + I + F + L L N + IE
Sbjct: 108 LRLNRNNLQLFPELLFLGTAKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIE 167
Query: 81 PGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKL--KSHI----DWTLVL 134
G F L LE L LN N+T +S ++F+++ L+T L N L H+ DW
Sbjct: 168 DGAFRALRDLEVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQR 227
Query: 135 GNLGK----LDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHL 190
+G + LR ++ + F + ++ ++ A T N+V
Sbjct: 228 PRVGLYTQCMGPSHLRGHNVAEVQKREFVCSGH-QSFMAPSCSVLHCPAACTCSNNIV-- 284
Query: 191 DSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGL 250
+C KG L+E + + L N + A P KL RL L N +
Sbjct: 285 ------DCRGKG-LTEIPTNLPETITEIRLEQNSIRVIPPG-AFSPYKKLRRLDLSNNQI 336
Query: 251 SRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMT 310
S L + F L L + N + + +L L SL+ L + + + + F +
Sbjct: 337 SELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLH 396
Query: 311 SLKTLILSGNKLETLESGLFQNLTHLSVLEL 341
+L L L NKL+T+ G F L + + L
Sbjct: 397 NLNLLSLYDNKLQTVAKGTFSALRAIQTMHL 427
Score = 190 (71.9 bits), Expect = 9.1e-15, Sum P(2) = 9.1e-15
Identities = 99/379 (26%), Positives = 153/379 (40%)
Query: 22 INLNANPIQPVEGA-FLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIE 80
++LN N I + F R L L + E +S I F +L L +L L+ N L++
Sbjct: 60 LDLNGNNITRITKIDFAGLRHLRVLQLMENRISTIERGAFQDLKELERLRLNRNNLQLFP 119
Query: 81 PGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKL 140
+F L L L+ + I AF +K L+L N++ D L L
Sbjct: 120 ELLFLGTAKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRA--LRDL 177
Query: 141 DTLDLRQSGISNLPDNVFANNTWLRNLNLAENELI-DLDVATT---LGQN-LVHLDSLDL 195
+ L L + I+ L F + LR L N L D +A L Q V L + +
Sbjct: 178 EVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCM 237
Query: 196 SNCHLKGPLSEDAFVNATKLRTLYLSGNP-LSAADLSVALKPLTKLHRLSLRNC---GLS 251
HL+G V + R SG+ A SV P ++ +C GL+
Sbjct: 238 GPSHLRGHN-----VAEVQKREFVCSGHQSFMAPSCSVLHCPAACTCSNNIVDCRGKGLT 292
Query: 252 RLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTS 311
+P N T E+ + N + SP + L LD+ + + ++ F + S
Sbjct: 293 EIPTNLPETIT---EIRLEQNSIRVIPPGAFSPYKKLRRLDLSNNQISELAPDAFQGLRS 349
Query: 312 LKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGN 371
L +L+L GNK+ L LF+ L L +L LN + L F + + +L L L N
Sbjct: 350 LNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLH---NLNLLSLYDN 406
Query: 372 PLHVLPDSTKQYSMRTIPT 390
L + T ++R I T
Sbjct: 407 KLQTVAKGTFS-ALRAIQT 424
Score = 173 (66.0 bits), Expect = 5.6e-09, P = 5.6e-09
Identities = 85/323 (26%), Positives = 135/323 (41%)
Query: 60 FTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLEL 119
F L L K++ S N + IE G F+ + + ++L L + F L LKTL L
Sbjct: 546 FKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLML 605
Query: 120 SQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENEL-IDLD 178
N++ S + +G LG + L L + I+ + F + L LNL N +
Sbjct: 606 RSNRI-SCVGNDSFIG-LGSVRLLSLYDNQITTVAPGAFDSLHSLSTLNLLANPFNCNCH 663
Query: 179 VATTLGQNLVHLDSLDLSNCHLKGP-LSEDAFVNATKLRTLYLS-GNP-LSAADLSVALK 235
+A LG+ L + N + P ++ + ++ GN S + LS
Sbjct: 664 LAW-LGEWL-RRKRIVTGNPRCQKPYFLKEIPIQDVAIQDFTCDDGNDDNSCSPLSRCPS 721
Query: 236 PLTKLHRL-SLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHL--- 291
T L + N GL LP T EL + N FT + L + +HL
Sbjct: 722 ECTCLDTVVRCSNKGLKVLPKGIPKDVT---ELYLDGNQ----FTLVPKELSNYKHLTLI 774
Query: 292 DMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNE 351
D+ + + +S +F MT L TLILS N+L + F L L +L L+ ++ + E
Sbjct: 775 DLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPE 834
Query: 352 TVFHENYTYPDLEELRLSGNPLH 374
F++ L L + NPL+
Sbjct: 835 GAFND---LSALSHLAIGANPLY 854
Score = 171 (65.3 bits), Expect = 7.9e-10, Sum P(2) = 7.9e-10
Identities = 68/307 (22%), Positives = 135/307 (43%)
Query: 47 MQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPS 106
+++ ++ I P F+ L +LDLS N + + P F L SL L+L +T + S
Sbjct: 307 LEQNSIRVIPPGAFSPYKKLRRLDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKS 366
Query: 107 AFDNLNHLKTLELSQNKLKS-HIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLR 165
F+ L L+ L L+ NK+ +D +L L+ L L + + + F+ ++
Sbjct: 367 LFEGLFSLQLLLLNANKINCLRVD---AFQDLHNLNLLSLYDNKLQTVAKGTFSALRAIQ 423
Query: 166 NLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLS-EDAFVNATKLRTLYLSG-- 222
++LA+N I D + +H + ++ S P + + K + SG
Sbjct: 424 TMHLAQNPFI-CDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRCSGTE 482
Query: 223 ---NPLSA---ADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLID 276
+ LS ADL+ K + + N L+++P + ++T L+ + +++
Sbjct: 483 DYRSKLSGDCFADLACPEKCRCEGTTVDCSNQRLNKIPDH-IPQYTAELRLNNNEFTVLE 541
Query: 277 AFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHL 336
A T + L L ++ + + I F + + ++L+ N+LE ++ +F+ L L
Sbjct: 542 A-TGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESL 600
Query: 337 SVLELNN 343
L L +
Sbjct: 601 KTLMLRS 607
Score = 147 (56.8 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 86/320 (26%), Positives = 134/320 (41%)
Query: 68 KLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSH 127
+LDL+GN + I F L L L L ++ I AF +L L+ L L++N L+
Sbjct: 59 RLDLNGNNITRITKIDFAGLRHLRVLQLMENRISTIERGAFQDLKELERLRLNRNNLQLF 118
Query: 128 IDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNL 187
+ L LG KL LDL ++ I +P F ++NL L N++ ++ + L
Sbjct: 119 PE-LLFLGT-AKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAF--RAL 174
Query: 188 VHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVA-LKP-LTKLHRLSL 245
L+ L L+N ++ LS +F + KLRT L N L D +A L L + R+ L
Sbjct: 175 RDLEVLTLNNNNITR-LSVASFNHMPKLRTFRLHSNNLYC-DCHLAWLSDWLRQRPRVGL 232
Query: 246 -RNC-GLSRLPANTFHRFTCLQELDISHNPLIDAFTALLS-PLE---SLEHLDMGYSNLQ 299
C G S L + + + H + ++L P S +D L
Sbjct: 233 YTQCMGPSHLRGHNVAEVQKREFVCSGHQSFMAPSCSVLHCPAACTCSNNIVDCRGKGLT 292
Query: 300 RISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYT 359
I + +T ++ L N + + G F L L+L+N ++ L F
Sbjct: 293 EIPTNLPETITEIR---LEQNSIRVIPPGAFSPYKKLRRLDLSNNQISELAPDAFQG--- 346
Query: 360 YPDLEELRLSGNPLHVLPDS 379
L L L GN + LP S
Sbjct: 347 LRSLNSLVLYGNKITELPKS 366
Score = 144 (55.7 bits), Expect = 7.5e-06, P = 7.5e-06
Identities = 88/346 (25%), Positives = 146/346 (42%)
Query: 49 ECTLSKIN--PQFFTNLTTLNKLDLSGNPLRIIEP-GVFDPLTSLEYLMLNRCNLTYISP 105
+C+ ++N P T +L L+ N ++E G+F L L + + +T I
Sbjct: 510 DCSNQRLNKIPDHIPQYTA--ELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEE 567
Query: 106 SAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLR 165
AF+ + + + L+ N+L++ + + G L L TL LR + IS + ++ F +R
Sbjct: 568 GAFEGASGVNEILLTSNRLEN-VQHKMFKG-LESLKTLMLRSNRISCVGNDSFIGLGSVR 625
Query: 166 NLNLAENELIDLDVATTLGQNLVHLDSLDL------SNCHLK--GP-LSEDAFV--NATK 214
L+L +N++ VA +L L +L+L NCHL G L V N
Sbjct: 626 LLSLYDNQITT--VAPGAFDSLHSLSTLNLLANPFNCNCHLAWLGEWLRRKRIVTGNPRC 683
Query: 215 LRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCG-LSRLPANTFHRFTCLQELDISHNP 273
+ +L P+ VA++ T +C LSR P+ TCL + N
Sbjct: 684 QKPYFLKEIPIQ----DVAIQDFTCDDGNDDNSCSPLSRCPSEC----TCLDTVVRCSNK 735
Query: 274 LIDAFTALLSPLESLE-HLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQN 332
+ + P + E +LD L S + +T + LS N++ TL + F N
Sbjct: 736 GLKVLPKGI-PKDVTELYLDGNQFTLVPKELSNYKHLTLID---LSNNRISTLSNQSFSN 791
Query: 333 LTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPD 378
+T L L L+ L + F L L L GN + V+P+
Sbjct: 792 MTQLLTLILSYNRLRCIPPRTFDG---LKSLRLLSLHGNDISVVPE 834
Score = 141 (54.7 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 43/134 (32%), Positives = 67/134 (50%)
Query: 17 PGLIT-INLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGN 74
P IT I L N I+ + GAF + L L + +S++ P F L +LN L L GN
Sbjct: 299 PETITEIRLEQNSIRVIPPGAFSPYKKLRRLDLSNNQISELAPDAFQGLRSLNSLVLYGN 358
Query: 75 PLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVL 134
+ + +F+ L SL+ L+LN + + AF +L++L L L NKL++ T
Sbjct: 359 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTVAKGTF-- 416
Query: 135 GNLGKLDTLDLRQS 148
L + T+ L Q+
Sbjct: 417 SALRAIQTMHLAQN 430
Score = 119 (46.9 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 36/117 (30%), Positives = 53/117 (45%)
Query: 17 PGLITINLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNP 75
P L IN + N I +E GAF A + + + L + + F L +L L L N
Sbjct: 550 PQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNR 609
Query: 76 LRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKS--HIDW 130
+ + F L S+ L L +T ++P AFD+L+ L TL L N H+ W
Sbjct: 610 ISCVGNDSFIGLGSVRLLSLYDNQITTVAPGAFDSLHSLSTLNLLANPFNCNCHLAW 666
Score = 113 (44.8 bits), Expect = 7.4e-13, Sum P(3) = 7.4e-13
Identities = 54/202 (26%), Positives = 93/202 (46%)
Query: 52 LSKINPQFFTNLTTLN--KLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFD 109
L+K+ PQ + + +D G LR + + P + E L LN N+T I+ F
Sbjct: 20 LNKVAPQACPAQCSCSGSTVDCHGLALRSVPRNI--PRNT-ERLDLNGNNITRITKIDFA 76
Query: 110 NLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNL 169
L HL+ L+L +N++ S I+ +L +L+ L L ++ + P+ +F L L+L
Sbjct: 77 GLRHLRVLQLMENRI-STIERG-AFQDLKELERLRLNRNNLQLFPELLFLGTAKLYRLDL 134
Query: 170 AENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAAD 229
+EN++ + G V + +L L + + + AF L L L+ N ++
Sbjct: 135 SENQIQAIPRKAFRGA--VDIKNLQLDYNQISC-IEDGAFRALRDLEVLTLNNNNITR-- 189
Query: 230 LSVA-LKPLTKLHRLSLRNCGL 250
LSVA + KL L + L
Sbjct: 190 LSVASFNHMPKLRTFRLHSNNL 211
Score = 111 (44.1 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 30/89 (33%), Positives = 44/89 (49%)
Query: 289 EHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTR 348
E LD+ +N+ RI++ F + L+ L L N++ T+E G FQ+L L L LN L
Sbjct: 58 ERLDLNGNNITRITKIDFAGLRHLRVLQLMENRISTIERGAFQDLKELERLRLNRNNLQL 117
Query: 349 LNETVFHENYTYPDLEELRLSGNPLHVLP 377
E +F L L LS N + +P
Sbjct: 118 FPELLFLGT---AKLYRLDLSENQIQAIP 143
Score = 109 (43.4 bits), Expect = 7.4e-13, Sum P(3) = 7.4e-13
Identities = 31/120 (25%), Positives = 59/120 (49%)
Query: 253 LPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSL 312
+P F + L+ LD+S+N + + L SL L + + + + +S F + SL
Sbjct: 315 IPPGAFSPYKKLRRLDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSL 374
Query: 313 KTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNP 372
+ L+L+ NK+ L FQ+L +L++L L + L + + F ++ + L+ NP
Sbjct: 375 QLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTVAKGTFS---ALRAIQTMHLAQNP 431
Score = 94 (38.1 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 40/148 (27%), Positives = 73/148 (49%)
Query: 178 DVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSV-ALKP 236
++ T L + + + L+ ++ + P AF KLR L LS N +S +L+ A +
Sbjct: 293 EIPTNLPETITEI-RLEQNSIRVIPP---GAFSPYKKLRRLDLSNNQIS--ELAPDAFQG 346
Query: 237 LTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPL----IDAFTALLSPLESLEHLD 292
L L+ L L ++ LP + F LQ L ++ N + +DAF L +L L
Sbjct: 347 LRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAF----QDLHNLNLLS 402
Query: 293 MGYSNLQRISRSTFLKMTSLKTLILSGN 320
+ + LQ +++ TF + +++T+ L+ N
Sbjct: 403 LYDNKLQTVAKGTFSALRAIQTMHLAQN 430
Score = 90 (36.7 bits), Expect = 9.1e-15, Sum P(2) = 9.1e-15
Identities = 36/180 (20%), Positives = 72/180 (40%)
Query: 369 SGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNET-VFHENYTYPDLEELRLSGN 427
S L+ +PD QY T ++ N +F V L T +F + P L ++ S N
Sbjct: 512 SNQRLNKIPDHIPQY---TAELRL-NNNEFTV----LEATGIFKK---LPQLRKINFSNN 560
Query: 428 PLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSF 487
+ + G +++ + +F ++ +L L +N +S SF
Sbjct: 561 KITDIEEGAFEGASGVNEILLTSN--RLENVQHKMFKGLESLKTLMLRSNRISCVGNDSF 618
Query: 488 QFXXXXXXXXXXXXXXXXXTHISPTVLRHNRAITSIKLVGNPWKCDCNIADMWEWATREK 547
T ++P +++++ L+ NP+ C+C++A + EW R++
Sbjct: 619 ---IGLGSVRLLSLYDNQITTVAPGAFDSLHSLSTLNLLANPFNCNCHLAWLGEWLRRKR 675
Score = 83 (34.3 bits), Expect = 8.4e-09, Sum P(2) = 8.4e-09
Identities = 83/342 (24%), Positives = 134/342 (39%)
Query: 122 NKLKSHI-DWTLVLGNLGKLDTLDLRQSGI-SNLPDNVFANNTWLRNLNLAENELIDLDV 179
NK+ HI +T L L + L +GI LP LR +N + N++ D++
Sbjct: 517 NKIPDHIPQYTAEL-RLNNNEFTVLEATGIFKKLPQ--------LRKINFSNNKITDIEE 567
Query: 180 ATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTK 239
G + V+ + L SN L+ + F L+TL L N +S + + L
Sbjct: 568 GAFEGASGVN-EILLTSN-RLEN-VQHKMFKGLESLKTLMLRSNRISCVG-NDSFIGLGS 623
Query: 240 LHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPL-IDAFTALLSPLESLEHLDMGYSNL 298
+ LSL + ++ + F L L++ NP + A L E L + N
Sbjct: 624 VRLLSLYDNQITTVAPGAFDSLHSLSTLNLLANPFNCNCHLAWLG--EWLRRKRIVTGN- 680
Query: 299 QRISRSTFLKMTSLKTLILS------GNKLETLE--SGLFQNLTHL-SVLELNNCGLTRL 349
R + FLK ++ + + GN + S T L +V+ +N GL L
Sbjct: 681 PRCQKPYFLKEIPIQDVAIQDFTCDDGNDDNSCSPLSRCPSECTCLDTVVRCSNKGLKVL 740
Query: 350 NETVFHENYTYP-DLEELRLSGNPLHVLPDSTKQYS-----------MRTIPTQIWKNFD 397
+ + P D+ EL L GN ++P Y + T+ Q + N
Sbjct: 741 PKGI-------PKDVTELYLDGNQFTLVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMT 793
Query: 398 FLVILFI-LNETVFHENYTYPDLEELRL---SGNPLHVLPTG 435
L+ L + N T+ L+ LRL GN + V+P G
Sbjct: 794 QLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEG 835
Score = 62 (26.9 bits), Expect = 7.3e-12, Sum P(2) = 7.3e-12
Identities = 26/135 (19%), Positives = 46/135 (34%)
Query: 418 DLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANN 477
D+ EL L GN ++P +I L F+N + +L L+ N
Sbjct: 747 DVTELYLDGNQFTLVPK---ELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 803
Query: 478 NLSMTSELSFQFXXXXXXXXXXXXXXXXXTHISPTVLRHNRAITSIKLVGNPWKCDCNIA 537
L +F + + A++ + + NP CDCN+
Sbjct: 804 RLRCIPPRTFD---GLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQ 860
Query: 538 DMWEWATREKGDIGV 552
+ +W E + G+
Sbjct: 861 WLSDWVKSEYKEPGI 875
Score = 57 (25.1 bits), Expect = 0.00060, Sum P(3) = 0.00060
Identities = 17/70 (24%), Positives = 29/70 (41%)
Query: 419 LEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNN 478
+ E+RL N + V+P G +I L P+ F R++ SL L N
Sbjct: 302 ITEIRLEQNSIRVIPPGAFSPYKKLRRLDLSNN--QISELAPDAFQGLRSLNSLVLYGNK 359
Query: 479 LSMTSELSFQ 488
++ + F+
Sbjct: 360 ITELPKSLFE 369
Score = 53 (23.7 bits), Expect = 6.2e-11, Sum P(2) = 6.2e-11
Identities = 9/19 (47%), Positives = 14/19 (73%)
Query: 518 RAITSIKLVGNPWKCDCNI 536
RAI ++ L NP+ CDC++
Sbjct: 420 RAIQTMHLAQNPFICDCHL 438
>ZFIN|ZDB-GENE-050522-43 [details] [associations]
symbol:vasna "vasorin a" species:7955 "Danio rerio"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR003961 PROSITE:PS50026 PROSITE:PS50853 PROSITE:PS51450
SMART:SM00060 SMART:SM00181 ZFIN:ZDB-GENE-050522-43
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013032 PROSITE:PS00022 InterPro:IPR000372 SMART:SM00013
HOVERGEN:HBG084318 EMBL:AY838878 IPI:IPI01006442 UniGene:Dr.83310
ProteinModelPortal:Q3MKM9 IntAct:Q3MKM9 InParanoid:Q3MKM9
Uniprot:Q3MKM9
Length = 688
Score = 222 (83.2 bits), Expect = 9.2e-15, P = 9.2e-15
Identities = 88/278 (31%), Positives = 133/278 (47%)
Query: 99 NLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVF 158
NL Y+ P + K L + QNK+ V LG+L+ LDL Q+ +S +PD VF
Sbjct: 42 NLIYM-PRGLPSTG--KQLYVFQNKINILQQQDFV--ELGELEMLDLSQNSLSEIPDGVF 96
Query: 159 ANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTL 218
+ + L NL+L+ N + + + +G LV+L+ L L + ++ + AF L L
Sbjct: 97 SPLSSLHNLDLSSNYITHISKDSFIG--LVNLERLYLYSNIIQN-IHPAAFEGLENLLEL 153
Query: 219 YLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAF 278
L GN +S AL+ L +L L L + L A L+ L I+ L
Sbjct: 154 KLQGNQISVLP---ALQ-LPRLLHLDLSYNSIPPLVAQDLQT-PHLESLKIAGLGLTSLD 208
Query: 279 TALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSV 338
LL L +L LD+ + L I + T M L+ L L+GN L +L+ FQNL +L
Sbjct: 209 EELLGSLVNLHVLDVSQNQLVDI-QPTLKSMGGLRNLNLTGNPLGSLKHEDFQNLVNLLE 267
Query: 339 LELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVL 376
L+L+N L E F+ +P LE+L + NP + L
Sbjct: 268 LDLSNLNLQGFPEGFFN---LFPKLEKLTAAENPFNCL 302
Score = 184 (69.8 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 87/272 (31%), Positives = 122/272 (44%)
Query: 31 PVEGAFLVARSLLY-----------LYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRII 79
P F V R+L+Y LY+ + ++ + Q F L L LDLS N L I
Sbjct: 32 PSNNIFCVQRNLIYMPRGLPSTGKQLYVFQNKINILQQQDFVELGELEMLDLSQNSLSEI 91
Query: 80 EPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGK 139
GVF PL+SL L L+ +T+IS +F L +L+ L L N +++ I G L
Sbjct: 92 PDGVFSPLSSLHNLDLSSNYITHISKDSFIGLVNLERLYLYSNIIQN-IHPAAFEG-LEN 149
Query: 140 LDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCH 199
L L L+ + IS LP L +L+L+ N + L VA L HL+SL ++
Sbjct: 150 LLELKLQGNQISVLPALQLPR---LLHLDLSYNSIPPL-VAQDL--QTPHLESLKIAGLG 203
Query: 200 LKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFH 259
L L E+ + L L +S N L D+ LK + L L+L L L F
Sbjct: 204 LTS-LDEELLGSLVNLHVLDVSQNQL--VDIQPTLKSMGGLRNLNLTGNPLGSLKHEDFQ 260
Query: 260 RFTCLQELDISHNPLI---DAFTALLSPLESL 288
L ELD+S+ L + F L LE L
Sbjct: 261 NLVNLLELDLSNLNLQGFPEGFFNLFPKLEKL 292
Score = 138 (53.6 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 74/281 (26%), Positives = 125/281 (44%)
Query: 22 INLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIE 80
++L+ N + + +G F SL L + ++ I+ F L L +L L N ++ I
Sbjct: 81 LDLSQNSLSEIPDGVFSPLSSLHNLDLSSNYITHISKDSFIGLVNLERLYLYSNIIQNIH 140
Query: 81 PGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKL 140
P F+ L +L L L ++ + L HL +LS N + + L +L
Sbjct: 141 PAAFEGLENLLELKLQGNQISVLPALQLPRLLHL---DLSYNSIPPLVAQDLQTPHL--- 194
Query: 141 DTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHL 200
++L + G+++L + + + L L++++N+L+D+ TL +++ L +L+L+ L
Sbjct: 195 ESLKIAGLGLTSLDEELLGSLVNLHVLDVSQNQLVDIQ--PTL-KSMGGLRNLNLTGNPL 251
Query: 201 KGPLSEDAFVNATKLRTLYLS-----GNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPA 255
G L + F N L L LS G P +L L+ LT C L+ PA
Sbjct: 252 -GSLKHEDFQNLVNLLELDLSNLNLQGFPEGFFNLFPKLEKLTAAENPFNCLCPLAWFPA 310
Query: 256 NTFH-RFTCLQ-ELDISHNPLIDAFTALLSPLESLEHLDMG 294
R L+ E H P I++ L E LEH D G
Sbjct: 311 WLKDVRVELLRTEETRCHFPPINSGKVL----EKLEHKDFG 347
Score = 124 (48.7 bits), Expect = 0.00041, P = 0.00041
Identities = 70/244 (28%), Positives = 106/244 (43%)
Query: 204 LSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTC 263
L + FV +L L LS N LS V PL+ LH L L + ++ + ++F
Sbjct: 67 LQQQDFVELGELEMLDLSQNSLSEIPDGV-FSPLSSLHNLDLSSNYITHISKDSFIGLVN 125
Query: 264 LQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLE 323
L+ L + N + + A LE+L L + N +IS L++ L L LS N +
Sbjct: 126 LERLYLYSNIIQNIHPAAFEGLENLLELKL-QGN--QISVLPALQLPRLLHLDLSYNSIP 182
Query: 324 TLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPL-HVLPDSTKQ 382
L + Q HL L++ GLT L+E + + +L L +S N L + P
Sbjct: 183 PLVAQDLQT-PHLESLKIAGLGLTSLDEELLG---SLVNLHVLDVSQNQLVDIQPTLKSM 238
Query: 383 YSMRTI-----PTQIWKNFDF--LVILFIL-----NETVFHENY--TYPDLEELRLSGNP 428
+R + P K+ DF LV L L N F E + +P LE+L + NP
Sbjct: 239 GGLRNLNLTGNPLGSLKHEDFQNLVNLLELDLSNLNLQGFPEGFFNLFPKLEKLTAAENP 298
Query: 429 LHVL 432
+ L
Sbjct: 299 FNCL 302
>UNIPROTKB|O75093 [details] [associations]
symbol:SLIT1 "Slit homolog 1 protein" species:9606 "Homo
sapiens" [GO:0021510 "spinal cord development" evidence=IEA]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IEA]
[GO:0033563 "dorsal/ventral axon guidance" evidence=IEA]
[GO:0040023 "establishment of nucleus localization" evidence=IEA]
[GO:0043395 "heparan sulfate proteoglycan binding" evidence=IEA]
[GO:0048843 "negative regulation of axon extension involved in axon
guidance" evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IMP] [GO:0005509 "calcium ion binding" evidence=NAS]
[GO:0005615 "extracellular space" evidence=NAS] [GO:0048853
"forebrain morphogenesis" evidence=NAS] [GO:0048846 "axon extension
involved in axon guidance" evidence=IDA] [GO:0050919 "negative
chemotaxis" evidence=IDA] [GO:0051964 "negative regulation of
synapse assembly" evidence=ISS] [GO:0048495 "Roundabout binding"
evidence=IPI] [GO:0021834 "chemorepulsion involved in embryonic
olfactory bulb interneuron precursor migration" evidence=IDA]
[GO:0007411 "axon guidance" evidence=IDA;TAS] [GO:0005737
"cytoplasm" evidence=IDA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005737
Reactome:REACT_111045 GO:GO:0005615 EMBL:CH471066 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0008045 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS50025
GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0040023 InterPro:IPR025875 Pfam:PF12799 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 GO:GO:0048846 Pfam:PF12661 GO:GO:0033563 GO:GO:0051964
GO:GO:0048853 Pfam:PF01463 EMBL:AL442123 GO:GO:0022028
GO:GO:0050919 GO:GO:0048843 EMBL:AB017167 EMBL:AB011537
EMBL:AL512424 EMBL:BC146851 EMBL:AY029183 IPI:IPI00296434
IPI:IPI00871419 RefSeq:NP_003052.2 UniGene:Hs.632082
ProteinModelPortal:O75093 SMR:O75093 IntAct:O75093
MINT:MINT-2797238 STRING:O75093 PhosphoSite:O75093 PaxDb:O75093
PRIDE:O75093 Ensembl:ENST00000266058 GeneID:6585 KEGG:hsa:6585
UCSC:uc001kmw.2 CTD:6585 GeneCards:GC10M098747 H-InvDB:HIX0079168
H-InvDB:HIX0170440 HGNC:HGNC:11085 HPA:HPA006879 MIM:603742
neXtProt:NX_O75093 PharmGKB:PA35938 HOGENOM:HOG000116120
HOVERGEN:HBG057959 InParanoid:O75093 KO:K06838 OrthoDB:EOG4VDPXM
PhylomeDB:O75093 ChiTaRS:SLIT1 GenomeRNAi:6585 NextBio:25625
ArrayExpress:O75093 Bgee:O75093 CleanEx:HS_SLIT1
Genevestigator:O75093 GermOnline:ENSG00000187122 Uniprot:O75093
Length = 1534
Score = 213 (80.0 bits), Expect = 9.6e-15, Sum P(2) = 9.6e-15
Identities = 98/379 (25%), Positives = 162/379 (42%)
Query: 17 PGLIT-INLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGN 74
P +T I L N I+ + GAF R L + + +++I P F L +LN L L GN
Sbjct: 308 PETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGN 367
Query: 75 PLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVL 134
+ + GVF L +L+ L+LN + I P AF +L +L L L NK++S T
Sbjct: 368 KITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFT- 426
Query: 135 GNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLD 194
+L + TL L Q+ P N WL + L N + + L +
Sbjct: 427 -SLRAIQTLHLAQN-----PFICDCNLKWLADF-LRTNPIETSGARCASPRRLANKRIGQ 479
Query: 195 LSNCHLKGPLSEDAFVNATKLRTLYLSGN-----PLSA-ADLSV----ALKPLTKLHR-- 242
+ + + E F+ T+ L N P + +V +LK LTK+
Sbjct: 480 IKSKKFRCSAKEQYFIPGTEDYQLNSECNSDVVCPHKCRCEANVVECSSLK-LTKIPERI 538
Query: 243 ------LSLRNCGLSRLPAN-TFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGY 295
L L N +S L A F + T L+++++S+N + + S+ L +
Sbjct: 539 PQSTAELRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTA 598
Query: 296 SNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFH 355
+ L+ I F + L+TL+L N++ + + F L ++ +L L + +T ++ F
Sbjct: 599 NQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQITTVSPGAFD 658
Query: 356 ENYTYPDLEELRLSGNPLH 374
T L L L NP +
Sbjct: 659 ---TLQSLSTLNLLANPFN 674
Score = 180 (68.4 bits), Expect = 3.4e-11, Sum P(2) = 3.4e-11
Identities = 83/334 (24%), Positives = 137/334 (41%)
Query: 15 DNPGLITINLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSG 73
D L + LN N + + E F ++L L + E + I + F T L L L
Sbjct: 107 DMKELERLRLNRNQLHMLPELLFQNNQALSRLDLSENAIQAIPRKAFRGATDLKNLQLDK 166
Query: 74 NPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKL--KSHIDWT 131
N + IE G F L LE L LN N+T I S+F+++ L+T L N L H+ W
Sbjct: 167 NQISCIEEGAFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWL 226
Query: 132 LVLGNLGKLDTLDL--RQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVH 189
L + T+ L + SG ++L A + E + T +
Sbjct: 227 SQW--LRQRPTIGLFTQCSGPASLRGLNVAEVQKSEFSCSGQGEAGRVPTCTLSSGSCPA 284
Query: 190 LDSLD--LSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRN 247
+ + + +C KG + A + T + + L N + + A P KL R+ L N
Sbjct: 285 MCTCSNGIVDCRGKGLTAIPANLPET-MTEIRLELNGIKSIPPG-AFSPYRKLRRIDLSN 342
Query: 248 CGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFL 307
++ + + F L L + N + D + L +L+ L + + + I F
Sbjct: 343 NQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQ 402
Query: 308 KMTSLKTLILSGNKLETLESGLFQNLTHLSVLEL 341
+ +L L L NK+++L G F +L + L L
Sbjct: 403 DLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHL 436
Score = 179 (68.1 bits), Expect = 4.3e-11, Sum P(2) = 4.3e-11
Identities = 92/353 (26%), Positives = 149/353 (42%)
Query: 38 VARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNR 97
+ R+ L + +++I+ F L L L L N + +E G FD + LE L LNR
Sbjct: 59 IPRNTERLELNGNNITRIHKNDFAGLKQLRVLQLMENQIGAVERGAFDDMKELERLRLNR 118
Query: 98 CNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNV 157
L + F N L L+LS+N +++ I G L L L ++ IS + +
Sbjct: 119 NQLHMLPELLFQNNQALSRLDLSENAIQA-IPRKAFRGATD-LKNLQLDKNQISCIEEGA 176
Query: 158 FANNTWLRNLNLAENELIDLDVAT-----TLGQNLVHLDSLDLSNCHLKGPLSEDAFVNA 212
F L L L N + + V++ L +H + L +CHL LS+
Sbjct: 177 FRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHL-FCDCHLAW-LSQWLRQRP 234
Query: 213 TKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHN 272
T SG P S L+VA ++ G R+P T +C S N
Sbjct: 235 TIGLFTQCSG-PASLRGLNVAEVQKSEFSCSGQGEAG--RVPTCTLSSGSCPAMCTCS-N 290
Query: 273 PLIDA----FTALLSPL-ESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLES 327
++D TA+ + L E++ + + + ++ I F L+ + LS N++ +
Sbjct: 291 GIVDCRGKGLTAIPANLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAP 350
Query: 328 GLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVL-PDS 379
FQ L L+ L L +T L VF YT L+ L L+ N ++ + PD+
Sbjct: 351 DAFQGLRSLNSLVLYGNKITDLPRGVFGGLYT---LQLLLLNANKINCIRPDA 400
Score = 119 (46.9 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 30/93 (32%), Positives = 49/93 (52%)
Query: 282 LSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLEL 341
LS + L+ +D+ + + +S S+F M+ L TLILS N L+ + FQ L L +L L
Sbjct: 780 LSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSL 839
Query: 342 NNCGLTRLNETVFHENYTYPDLEELRLSGNPLH 374
+ ++ L E +F + L L + NPL+
Sbjct: 840 HGNDISTLQEGIFAD---VTSLSHLAIGANPLY 869
Score = 110 (43.8 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 27/81 (33%), Positives = 44/81 (54%)
Query: 261 FTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGN 320
F LQ +D+S+N + + + + L L + Y+ LQ I F + SL+ L L GN
Sbjct: 783 FKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLHGN 842
Query: 321 KLETLESGLFQNLTHLSVLEL 341
+ TL+ G+F ++T LS L +
Sbjct: 843 DISTLQEGIFADVTSLSHLAI 863
Score = 104 (41.7 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 34/107 (31%), Positives = 50/107 (46%)
Query: 19 LITINLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLR 77
L + L N I VE GAF + L L + L + F N L++LDLS N ++
Sbjct: 87 LRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLHMLPELLFQNNQALSRLDLSENAIQ 146
Query: 78 IIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKL 124
I F T L+ L L++ ++ I AF L L+ L L+ N +
Sbjct: 147 AIPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNI 193
Score = 84 (34.6 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 38/139 (27%), Positives = 59/139 (42%)
Query: 185 QNLVHLDSL-DLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRL 243
Q LD++ SN HL+ L + N T+L YL GN + + L L +
Sbjct: 736 QECACLDTVVRCSNKHLRA-LPKGIPKNVTEL---YLDGNQFTL--VPGQLSTFKYLQLV 789
Query: 244 SLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISR 303
L N +S L ++F + L L +S+N L L SL L + +++ +
Sbjct: 790 DLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLHGNDISTLQE 849
Query: 304 STFLKMTSLKTLILSGNKL 322
F +TSL L + N L
Sbjct: 850 GIFADVTSLSHLAIGANPL 868
Score = 66 (28.3 bits), Expect = 9.6e-15, Sum P(2) = 9.6e-15
Identities = 26/125 (20%), Positives = 46/125 (36%)
Query: 418 DLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANN 477
++ EL L GN ++P G KI L + F N +T+L L+ N
Sbjct: 762 NVTELYLDGNQFTLVP-GQLSTFKYLQLVDLSNN--KISSLSNSSFTNMSQLTTLILSYN 818
Query: 478 NLSMTSELSFQFXXXXXXXXXXXXXXXXXTHISPTVLRHNRAITSIKLVGNPWKCDCNIA 537
L L+FQ + + + +++ + + NP CDC++
Sbjct: 819 ALQCIPPLAFQ---GLRSLRLLSLHGNDISTLQEGIFADVTSLSHLAIGANPLYCDCHLR 875
Query: 538 DMWEW 542
+ W
Sbjct: 876 WLSSW 880
Score = 64 (27.6 bits), Expect = 5.5e-11, Sum P(2) = 5.5e-11
Identities = 31/116 (26%), Positives = 51/116 (43%)
Query: 315 LILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLH 374
L L GN+ TL G +L +++L+N ++ L+ + F N + L L LS N L
Sbjct: 766 LYLDGNQF-TLVPGQLSTFKYLQLVDLSNNKISSLSNSSF-TNMS--QLTTLILSYNALQ 821
Query: 375 VLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTYPDLEELRLSGNPLH 430
+P Q +R++ D + L E +F + L L + NPL+
Sbjct: 822 CIPPLAFQ-GLRSLRLLSLHGND----ISTLQEGIFAD---VTSLSHLAIGANPLY 869
>TAIR|locus:2156349 [details] [associations]
symbol:GSO2 "GASSHO 2" species:3702 "Arabidopsis
thaliana" [GO:0004672 "protein kinase activity" evidence=IEA]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA;ISS] [GO:0004713 "protein tyrosine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0006468 "protein phosphorylation" evidence=IEA;ISS] [GO:0007169
"transmembrane receptor protein tyrosine kinase signaling pathway"
evidence=ISS] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] [GO:0009553 "embryo sac
development" evidence=IMP] [GO:0008544 "epidermis development"
evidence=IGI] [GO:0009790 "embryo development" evidence=IGI]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000719
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
PROSITE:PS51450 GO:GO:0016021 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF56112 GO:GO:0004674
eggNOG:COG4886 Gene3D:2.60.120.200 InterPro:IPR013320 GO:GO:0009790
HSSP:P36897 GO:GO:0009553 GO:GO:0008544 InterPro:IPR025875
Pfam:PF12799 HOGENOM:HOG000116551 InterPro:IPR013210 Pfam:PF08263
ProtClustDB:CLSN2687271 EMBL:AB016874 IPI:IPI00520102
RefSeq:NP_199283.1 UniGene:At.7718 ProteinModelPortal:Q9FIZ3
SMR:Q9FIZ3 PaxDb:Q9FIZ3 PRIDE:Q9FIZ3 EnsemblPlants:AT5G44700.1
GeneID:834499 KEGG:ath:AT5G44700 GeneFarm:664 TAIR:At5g44700
InParanoid:Q9FIZ3 OMA:PRINEMA PhylomeDB:Q9FIZ3 ArrayExpress:Q9FIZ3
Uniprot:Q9FIZ3
Length = 1252
Score = 231 (86.4 bits), Expect = 9.9e-15, Sum P(2) = 9.9e-15
Identities = 111/368 (30%), Positives = 163/368 (44%)
Query: 19 LITINLNANP-IQPVEGAFL-VARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPL 76
LI I+L++N + P+ ++ SL L++ LS P +L L L L N L
Sbjct: 97 LIHIDLSSNRLVGPIPTTLSNLSSSLESLHLFSNLLSGDIPSQLGSLVNLKSLKLGDNEL 156
Query: 77 RIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGN 136
P F L +L+ L L C LT + PS F L L+TL L N+L+ I
Sbjct: 157 NGTIPETFGNLVNLQMLALASCRLTGLIPSRFGRLVQLQTLILQDNELEGPIP-----AE 211
Query: 137 LGKLDTLDLRQSGISNLPDNVFANNTWLRNL---NLAENELIDLDVATTLGQNLVHLDSL 193
+G +L L + + L ++ A L+NL NL +N ++ + LG +LV + L
Sbjct: 212 IGNCTSLALFAAAFNRLNGSLPAELNRLKNLQTLNLGDNSFSG-EIPSQLG-DLVSIQYL 269
Query: 194 DLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLS-R 252
+L L+G L L+TL LS N L+ + + +L L L LS
Sbjct: 270 NLIGNQLQG-LIPKRLTELANLQTLDLSSNNLTGV-IHEEFWRMNQLEFLVLAKNRLSGS 327
Query: 253 LPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQ-RISRSTFLKMTS 311
LP T L++L +S L A +S +SL+ LD+ + L +I S F ++
Sbjct: 328 LPKTICSNNTSLKQLFLSETQLSGEIPAEISNCQSLKLLDLSNNTLTGQIPDSLF-QLVE 386
Query: 312 LKTLILSGNKLE-TLESGLFQNLTHLSVLEL--NNCGLTRLNETVFHENYTYPDLEELRL 368
L L L+ N LE TL S + NLT+L L NN E F L E R
Sbjct: 387 LTNLYLNNNSLEGTLSSSI-SNLTNLQEFTLYHNNLEGKVPKEIGFLGKLEIMYLYENRF 445
Query: 369 SGN-PLHV 375
SG P+ +
Sbjct: 446 SGEMPVEI 453
Score = 196 (74.1 bits), Expect = 5.9e-11, Sum P(2) = 5.9e-11
Identities = 100/331 (30%), Positives = 154/331 (46%)
Query: 51 TLSKINPQFFTNLTTLNKL-DL-SGNPLRIIEPGVFDPLTSLEYLMLNRCNLT-YISPSA 107
TL ++ F TN + L D SG+P GV + L L+ LT ISPS
Sbjct: 32 TLLELKNSFITNPKEEDVLRDWNSGSPSYCNWTGVTCGGREIIGLNLSGLGLTGSISPSI 91
Query: 108 --FDNLNHLKTLELSQNKLKSHIDWTLVLGNLGK-LDTLDLRQSGIS-NLPDNVFANNTW 163
F+NL H+ +LS N+L I TL NL L++L L + +S ++P + +
Sbjct: 92 GRFNNLIHI---DLSSNRLVGPIPTTL--SNLSSSLESLHLFSNLLSGDIPSQL-GSLVN 145
Query: 164 LRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGN 223
L++L L +NEL + + T G NLV+L L L++C L G L F +L+TL L N
Sbjct: 146 LKSLKLGDNEL-NGTIPETFG-NLVNLQMLALASCRLTG-LIPSRFGRLVQLQTLILQDN 202
Query: 224 PLSAADLSVALKPLTKLHRLSLRNCGLS-RLPANTFHRFTCLQELDISHNPLIDAFTALL 282
L + + T L + L+ LPA +R LQ L++ N + L
Sbjct: 203 ELEGP-IPAEIGNCTSLALFAAAFNRLNGSLPAE-LNRLKNLQTLNLGDNSFSGEIPSQL 260
Query: 283 SPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELN 342
L S+++L++ + LQ + ++ +L+TL LS N L + F + L L L
Sbjct: 261 GDLVSIQYLNLIGNQLQGLIPKRLTELANLQTLDLSSNNLTGVIHEEFWRMNQLEFLVLA 320
Query: 343 NCGLT-RLNETVFHENYTYPDL--EELRLSG 370
L+ L +T+ N + L E +LSG
Sbjct: 321 KNRLSGSLPKTICSNNTSLKQLFLSETQLSG 351
Score = 186 (70.5 bits), Expect = 4.7e-09, Sum P(2) = 4.7e-09
Identities = 84/316 (26%), Positives = 134/316 (42%)
Query: 31 PVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLT-S 89
P FL A L +Y +L P NL L +++ S N G PL S
Sbjct: 522 PSSFGFLTALELFMIYNN--SLQGNLPDSLINLKNLTRINFSSNKFN----GSISPLCGS 575
Query: 90 LEYLMLNRCNLTYIS--PSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQ 147
YL + + P +L L L +N+ I T G + +L LD+ +
Sbjct: 576 SSYLSFDVTENGFEGDIPLELGKSTNLDRLRLGKNQFTGRIPRTF--GKISELSLLDISR 633
Query: 148 SGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSED 207
+ +S + L +++L N L + + T LG+ L L L LS+ G L +
Sbjct: 634 NSLSGIIPVELGLCKKLTHIDLNNNYLSGV-IPTWLGK-LPLLGELKLSSNKFVGSLPTE 691
Query: 208 AFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQEL 267
F + T + TL+L GN L+ + + + L L+ L+L LS +T + + L EL
Sbjct: 692 IF-SLTNILTLFLDGNSLNGS-IPQEIGNLQALNALNLEENQLSGPLPSTIGKLSKLFEL 749
Query: 268 DISHNPLIDAFTALLSPLESLEH-LDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLE 326
+S N L + L+ L+ LD+ Y+N ST + L++L LS N+L
Sbjct: 750 RLSRNALTGEIPVEIGQLQDLQSALDLSYNNFTGRIPSTISTLPKLESLDLSHNQLVGEV 809
Query: 327 SGLFQNLTHLSVLELN 342
G ++ L L L+
Sbjct: 810 PGQIGDMKSLGYLNLS 825
Score = 181 (68.8 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 83/292 (28%), Positives = 127/292 (43%)
Query: 13 NLDNPGLITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLS 72
NL N L IN ++N + S L + E P T L++L L
Sbjct: 551 NLKN--LTRINFSSNKFNGSISPLCGSSSYLSFDVTENGFEGDIPLELGKSTNLDRLRLG 608
Query: 73 GNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHID-WT 131
N P F ++ L L ++R +L+ I P L ++L+ N L I W
Sbjct: 609 KNQFTGRIPRTFGKISELSLLDISRNSLSGIIPVELGLCKKLTHIDLNNNYLSGVIPTW- 667
Query: 132 LVLGNLGKLDTLDLRQSG-ISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHL 190
LG L L L L + + +LP +F+ L L L N L + + +G NL L
Sbjct: 668 --LGKLPLLGELKLSSNKFVGSLPTEIFSLTNIL-TLFLDGNSL-NGSIPQEIG-NLQAL 722
Query: 191 DSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHR---LSLRN 247
++L+L L GPL +KL L LS N L+ ++ V + L L LS N
Sbjct: 723 NALNLEENQLSGPLPS-TIGKLSKLFELRLSRNALTG-EIPVEIGQLQDLQSALDLSYNN 780
Query: 248 CGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQ 299
R+P+ T L+ LD+SHN L+ + ++SL +L++ Y+NL+
Sbjct: 781 F-TGRIPS-TISTLPKLESLDLSHNQLVGEVPGQIGDMKSLGYLNLSYNNLE 830
Score = 180 (68.4 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 95/340 (27%), Positives = 149/340 (43%)
Query: 40 RSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCN 99
+ L L+++E L P N + +DL+ N L P F LT+LE M+ +
Sbjct: 481 KDLTRLHLRENELVGNIPASLGNCHQMTVIDLADNQLSGSIPSSFGFLTALELFMIYNNS 540
Query: 100 LTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGIS-NLPDNVF 158
L P + NL +L + S NK I + + G+ L + D+ ++G ++P +
Sbjct: 541 LQGNLPDSLINLKNLTRINFSSNKFNGSI--SPLCGSSSYL-SFDVTENGFEGDIPLEL- 596
Query: 159 ANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTL 218
+T L L L +N+ + T G+ + L LD+S L G + + + KL +
Sbjct: 597 GKSTNLDRLRLGKNQFTGR-IPRTFGK-ISELSLLDISRNSLSGIIPVELGL-CKKLTHI 653
Query: 219 YLSGNPLSAADLSVALKPLTKLHRLSLR-NCGLSRLPANTFHRFTCLQELDISHNPLIDA 277
L+ N LS + L L L L L N + LP F T + L + N L +
Sbjct: 654 DLNNNYLSGV-IPTWLGKLPLLGELKLSSNKFVGSLPTEIFS-LTNILTLFLDGNSLNGS 711
Query: 278 FTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLE---TLESGLFQNLT 334
+ L++L L++ + L ST K++ L L LS N L +E G Q+L
Sbjct: 712 IPQEIGNLQALNALNLEENQLSGPLPSTIGKLSKLFELRLSRNALTGEIPVEIGQLQDLQ 771
Query: 335 HLSVLELNNCGLT-RLNETVFHENYTYPDLEELRLSGNPL 373
S L+L+ T R+ T+ T P LE L LS N L
Sbjct: 772 --SALDLSYNNFTGRIPSTIS----TLPKLESLDLSHNQL 805
Score = 156 (60.0 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 92/342 (26%), Positives = 154/342 (45%)
Query: 105 PSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWL 164
PS+ L L L L +N+L +I +L GN ++ +DL + +S + F T L
Sbjct: 474 PSSIGRLKDLTRLHLRENELVGNIPASL--GNCHQMTVIDLADNQLSGSIPSSFGFLTAL 531
Query: 165 RNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNP 224
L + N + ++ +L NL +L ++ S+ G +S ++ + ++ N
Sbjct: 532 E-LFMIYNNSLQGNLPDSL-INLKNLTRINFSSNKFNGSISP--LCGSSSYLSFDVTENG 587
Query: 225 LSAADLSVALKPLTKLHRLSL-RNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLS 283
D+ + L T L RL L +N R+P TF + + L LDIS N L L
Sbjct: 588 FEG-DIPLELGKSTNLDRLRLGKNQFTGRIP-RTFGKISELSLLDISRNSLSGIIPVELG 645
Query: 284 PLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNK-LETLESGLFQNLTHLSVLELN 342
+ L H+D+ + L + + K+ L L LS NK + +L + +F +LT++ L L+
Sbjct: 646 LCKKLTHIDLNNNYLSGVIPTWLGKLPLLGELKLSSNKFVGSLPTEIF-SLTNILTLFLD 704
Query: 343 NCGLT-RLNETVFH-ENYTYPDLEELRLSGNPL-HVLPDSTKQYSMRT--------IPTQ 391
L + + + + + +LEE +LSG PL + +K + +R IP +
Sbjct: 705 GNSLNGSIPQEIGNLQALNALNLEENQLSG-PLPSTIGKLSKLFELRLSRNALTGEIPVE 763
Query: 392 IWKNFDFLVILFIL--NET--VFHENYTYPDLEELRLSGNPL 429
I + D L + N T + T P LE L LS N L
Sbjct: 764 IGQLQDLQSALDLSYNNFTGRIPSTISTLPKLESLDLSHNQL 805
Score = 152 (58.6 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 87/363 (23%), Positives = 146/363 (40%)
Query: 13 NLDNPGLITI-NLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDL 71
NL N T+ + N P E FL ++YLY E S P N T L ++D
Sbjct: 407 NLTNLQEFTLYHNNLEGKVPKEIGFLGKLEIMYLY--ENRFSGEMPVEIGNCTRLQEIDW 464
Query: 72 SGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWT 131
GN L P L L L L L P++ N + + ++L+ N+L I +
Sbjct: 465 YGNRLSGEIPSSIGRLKDLTRLHLRENELVGNIPASLGNCHQMTVIDLADNQLSGSIPSS 524
Query: 132 LVLGNLGKLDTLDLRQSGIS-NLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHL 190
G L L+ + + + NLPD++ N L +N + N+ + ++ G + +L
Sbjct: 525 F--GFLTALELFMIYNNSLQGNLPDSLI-NLKNLTRINFSSNKF-NGSISPLCGSSS-YL 579
Query: 191 DSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGL 250
S D++ +G + + +T L L L N + + +++L L + L
Sbjct: 580 -SFDVTENGFEGDIPLE-LGKSTNLDRLRLGKNQFTGR-IPRTFGKISELSLLDISRNSL 636
Query: 251 SRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMT 310
S + L +D+++N L L L L L + + + +T
Sbjct: 637 SGIIPVELGLCKKLTHIDLNNNYLSGVIPTWLGKLPLLGELKLSSNKFVGSLPTEIFSLT 696
Query: 311 SLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSG 370
++ TL L GN +L + Q + +L L N +L+ + L ELRLS
Sbjct: 697 NILTLFLDGN---SLNGSIPQEIGNLQALNALNLEENQLSGPLPSTIGKLSKLFELRLSR 753
Query: 371 NPL 373
N L
Sbjct: 754 NAL 756
Score = 45 (20.9 bits), Expect = 9.9e-15, Sum P(2) = 9.9e-15
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 460 PNVFNNTRNITSLNLANNNLSMTSELSFQF 489
P N +T ++LA+N LS + SF F
Sbjct: 498 PASLGNCHQMTVIDLADNQLSGSIPSSFGF 527
Score = 37 (18.1 bits), Expect = 6.7e-14, Sum P(2) = 6.7e-14
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 460 PNVFNNTRNITSLNLANNNLSMTSELSFQF 489
P + +++ LNL+ NNL +L QF
Sbjct: 810 PGQIGDMKSLGYLNLSYNNLE--GKLKKQF 837
>FB|FBgn0013272 [details] [associations]
symbol:Gp150 "Gp150" species:7227 "Drosophila melanogaster"
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0007185
"transmembrane receptor protein tyrosine phosphatase signaling
pathway" evidence=IDA] [GO:0048749 "compound eye development"
evidence=IMP] [GO:0002121 "inter-male aggressive behavior"
evidence=IMP] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
GO:GO:0005886 InterPro:IPR003591 SMART:SM00369 GO:GO:0002121
ChiTaRS:ANPEP GO:GO:0048749 GO:GO:0007185 FlyBase:FBgn0013272
EMBL:BT015195 ProteinModelPortal:Q6AWQ3 STRING:Q6AWQ3 PRIDE:Q6AWQ3
InParanoid:Q6AWQ3 ArrayExpress:Q6AWQ3 Bgee:Q6AWQ3 Uniprot:Q6AWQ3
Length = 1076
Score = 235 (87.8 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 98/349 (28%), Positives = 161/349 (46%)
Query: 35 AFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEP-GVFDPLTSLEYL 93
AF L + + + L+ INP F L L +SGN L ++ +S+E L
Sbjct: 336 AFHGLNELYAVNLTDVGLAIINPDTFVGNKKLRMLTISGNDLSVMSSIHYLLKSSSIEEL 395
Query: 94 MLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNL 153
+R NL ++P AF +L+++ + LSQN LK + L L+ LDL + ++ L
Sbjct: 396 DFSRNNLMELNPKAFSHLSNVVYINLSQNSLKKLPEKAFEKVTL--LEELDLSYNSLTEL 453
Query: 154 PDNVFANNTWLRNLNLAENELI-DLDVATTLGQNLVHLDSLDLS-NCHLKGPLSEDAFVN 211
P ++F N T L L+L N DL T L LDLS N ++ + F
Sbjct: 454 PRDIF-NGTTLSILHLKYNTFNGDLHFGTK------DLQQLDLSFNSIVQ--VHHSMFDK 504
Query: 212 ATKLRTLYLSGNPLSAA--DLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDI 269
L L L GN + D + LK L + LS+ + L ++ F + + L + +
Sbjct: 505 MPGLTNLNLKGNGIKKIQPDSFLTLKNLRHID-LSIND--LDQISGMLFFKNSELDVIRL 561
Query: 270 SHNPLI-----DAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLET 324
+ NP + D F + ++ +LD+ + + F M L TL L+ N +
Sbjct: 562 NDNPRLSQLPTDGFLSYSGEF-TVYYLDISNCAIGPLGHKAFSTMPHLTTLKLAWNNINH 620
Query: 325 LESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPL 373
L +F L L L+L+N +TR+++ +F +N +L +L L+GNP+
Sbjct: 621 LPREIFTELHKLIDLDLSNNLITRMDDLIFMDN---GELTKLSLAGNPI 666
Score = 221 (82.9 bits), Expect = 3.4e-13, Sum P(2) = 3.4e-13
Identities = 98/397 (24%), Positives = 173/397 (43%)
Query: 4 GHPVYNDRRNLDNPGLITINLNANPIQPVEGA--FLVARSLLYLYMQECTLSKINPQFFT 61
G + N + N L + ++ N + + L + S+ L L ++NP+ F+
Sbjct: 352 GLAIINPDTFVGNKKLRMLTISGNDLSVMSSIHYLLKSSSIEELDFSRNNLMELNPKAFS 411
Query: 62 NLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQ 121
+L+ + ++LS N L+ + F+ +T LE L L+ +LT + F+ L L L
Sbjct: 412 HLSNVVYINLSQNSLKKLPEKAFEKVTLLEELDLSYNSLTELPRDIFNGTT-LSILHLKY 470
Query: 122 NKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENEL--IDLDV 179
N + + L LDL + I + ++F L NLNL N + I D
Sbjct: 471 NTFNGDLHF-----GTKDLQQLDLSFNSIVQVHHSMFDKMPGLTNLNLKGNGIKKIQPDS 525
Query: 180 ATTLGQNLVHLDSLDLSNC-HLKGPLSEDAFVNATKLRTLYLSGNP-LSA--ADLSVALK 235
TL +NL H+D L +++ + G L F ++L + L+ NP LS D ++
Sbjct: 526 FLTL-KNLRHID-LSINDLDQISGML----FFKNSELDVIRLNDNPRLSQLPTDGFLSYS 579
Query: 236 PLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGY 295
++ L + NC + L F L L ++ N + + + L L LD+
Sbjct: 580 GEFTVYYLDISNCAIGPLGHKAFSTMPHLTTLKLAWNNINHLPREIFTELHKLIDLDLSN 639
Query: 296 SNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRL-NETVF 354
+ + R+ F+ L L L+GN + L LF L L L++N+C LT L ++
Sbjct: 640 NLITRMDDLIFMDNGELTKLSLAGNPISRLSVRLFLPLHQLRCLDVNDCELTTLLSDRDL 699
Query: 355 HENYT-YPDLEELRLSGNPLH-VLPDSTKQY-SMRTI 388
Y + L SGN + + + K + ++R++
Sbjct: 700 GAGYKIFDSLRSFNASGNLIKKITSEDVKSFKNLRSL 736
Score = 189 (71.6 bits), Expect = 6.9e-11, P = 6.9e-11
Identities = 95/380 (25%), Positives = 154/380 (40%)
Query: 158 FANNTWLRN---LNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATK 214
F N L+N + +A L L G N L +++L++ L ++ D FV K
Sbjct: 310 FFQNLGLKNVASIKIANCTLEYLHAEAFHGLN--ELYAVNLTDVGL-AIINPDTFVGNKK 366
Query: 215 LRTLYLSGNPLSA-ADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNP 273
LR L +SGN LS + + LK + + L L L F + + +++S N
Sbjct: 367 LRMLTISGNDLSVMSSIHYLLKS-SSIEELDFSRNNLMELNPKAFSHLSNVVYINLSQNS 425
Query: 274 LIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNL 333
L + LE LD+ Y++L + R F T+L L L K T L
Sbjct: 426 LKKLPEKAFEKVTLLEELDLSYNSLTELPRDIF-NGTTLSILHL---KYNTFNGDLHFGT 481
Query: 334 THLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLH-VLPDSTKQY-SMRTIPTQ 391
L L+L+ + +++ ++F + P L L L GN + + PDS ++R I
Sbjct: 482 KDLQQLDLSFNSIVQVHHSMFDK---MPGLTNLNLKGNGIKKIQPDSFLTLKNLRHIDLS 538
Query: 392 IWKNFDFLVILFILNETVFHENYTYPDLEELRLSGNP-LHVLPT-GNXXXXXXXXXXXXX 449
I + D + + +F +N +L+ +RL+ NP L LPT G
Sbjct: 539 I-NDLDQI------SGMLFFKN---SELDVIRLNDNPRLSQLPTDGFLSYSGEFTVYYLD 588
Query: 450 XXXCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSFQFXXXXXXXXXXXXXXXXXTHI 509
C I L F+ ++T+L LA NN++ L + T +
Sbjct: 589 ISNCAIGPLGHKAFSTMPHLTTLKLAWNNIN---HLPREIFTELHKLIDLDLSNNLITRM 645
Query: 510 SPTVLRHNRAITSIKLVGNP 529
+ N +T + L GNP
Sbjct: 646 DDLIFMDNGELTKLSLAGNP 665
Score = 177 (67.4 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 97/413 (23%), Positives = 187/413 (45%)
Query: 39 ARSLLYLYMQECTLSKINPQFF-TNLTTLNKLDLSGNPLRIIEPGVFDPL--TSLEYLML 95
AR++ + C+ + Q F +++T L ++ ++ P F L ++ + +
Sbjct: 265 ARNVNSYLVATCSRLDMGIQKFGSDITDLVVTNVGPKYPILMGPNFFQNLGLKNVASIKI 324
Query: 96 NRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPD 155
C L Y+ AF LN L + L+ L + I+ +GN KL L + + +S +
Sbjct: 325 ANCTLEYLHAEAFHGLNELYAVNLTDVGL-AIINPDTFVGNK-KLRMLTISGNDLSVMSS 382
Query: 156 -NVFANNTWLRNLNLAENELIDLDV-ATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNAT 213
+ ++ + L+ + N L++L+ A + N+V+++ LS LK L E AF T
Sbjct: 383 IHYLLKSSSIEELDFSRNNLMELNPKAFSHLSNVVYIN---LSQNSLK-KLPEKAFEKVT 438
Query: 214 KLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNP 273
L L LS N L+ + T LS+ + + + LQ+LD+S N
Sbjct: 439 LLEELDLSYNSLTELPRDI-FNGTT----LSILHLKYNTFNGDLHFGTKDLQQLDLSFNS 493
Query: 274 LIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNL 333
++ ++ + L +L++ + +++I +FL + +L+ + LS N L+ + LF
Sbjct: 494 IVQVHHSMFDKMPGLTNLNLKGNGIKKIQPDSFLTLKNLRHIDLSINDLDQISGMLFFKN 553
Query: 334 THLSVLELN-NCGLTRLNETVFHE---NYT--YPDLEELRLS--GNP-LHVLPD-STKQY 383
+ L V+ LN N L++L F +T Y D+ + G+ +P +T +
Sbjct: 554 SELDVIRLNDNPRLSQLPTDGFLSYSGEFTVYYLDISNCAIGPLGHKAFSTMPHLTTLKL 613
Query: 384 SMRTI---PTQIWKNFDFLVILFILNETVFH-ENYTYPD---LEELRLSGNPL 429
+ I P +I+ L+ L + N + ++ + D L +L L+GNP+
Sbjct: 614 AWNNINHLPREIFTELHKLIDLDLSNNLITRMDDLIFMDNGELTKLSLAGNPI 666
Score = 176 (67.0 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 86/362 (23%), Positives = 160/362 (44%)
Query: 35 AFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLM 94
AF +++Y+ + + +L K+ + F +T L +LDLS N L + +F+ T+L L
Sbjct: 409 AFSHLSNVVYINLSQNSLKKLPEKAFEKVTLLEELDLSYNSLTELPRDIFNG-TTLSILH 467
Query: 95 LNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLP 154
L + N T+ F + L+ L+LS N + + ++ + L L+L+ +GI +
Sbjct: 468 L-KYN-TFNGDLHFGTKD-LQQLDLSFNSIVQ-VHHSM-FDKMPGLTNLNLKGNGIKKIQ 522
Query: 155 DNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNAT- 213
+ F LR+++L+ N+L D ++ L LD + L++ L D F++ +
Sbjct: 523 PDSFLTLKNLRHIDLSINDL-D-QISGMLFFKNSELDVIRLNDNPRLSQLPTDGFLSYSG 580
Query: 214 KLRTLYLSGNPLSAADLS-VALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHN 272
+ YL + + L A + L L L ++ LP F L +LD+S+N
Sbjct: 581 EFTVYYLDISNCAIGPLGHKAFSTMPHLTTLKLAWNNINHLPREIFTELHKLIDLDLSNN 640
Query: 273 PLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESG--LF 330
+ + L L + + + R+S FL + L+ L ++ +L TL S L
Sbjct: 641 LITRMDDLIFMDNGELTKLSLAGNPISRLSVRLFLPLHQLRCLDVNDCELTTLLSDRDLG 700
Query: 331 QNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPT 390
L N + + + ++ +L L ++ NPL PD + S T+
Sbjct: 701 AGYKIFDSLRSFNASGNLIKKITSEDVKSFKNLRSLDITNNPLKCTPDFQEFISYVTLQM 760
Query: 391 QI 392
Q+
Sbjct: 761 QM 762
Score = 39 (18.8 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 467 RNITSLNLANNNLSMTSE 484
+N+ SL++ NN L T +
Sbjct: 731 KNLRSLDITNNPLKCTPD 748
>FB|FBgn0003255 [details] [associations]
symbol:rk "rickets" species:7227 "Drosophila melanogaster"
[GO:0004930 "G-protein coupled receptor activity" evidence=ISS;NAS]
[GO:0016021 "integral to membrane" evidence=IEA;ISS] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IEA;ISS]
[GO:0016500 "protein-hormone receptor activity" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=NAS] [GO:0008188
"neuropeptide receptor activity" evidence=ISS] [GO:0007564
"regulation of chitin-based cuticle tanning" evidence=IMP]
[GO:0001837 "epithelial to mesenchymal transition" evidence=IMP]
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 EMBL:AE014134
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0001837
InterPro:IPR025875 Pfam:PF12799 GO:GO:0016500 GO:GO:0008188
GeneTree:ENSGT00650000092962 KO:K08399 RefSeq:NP_476702.1
UniGene:Dm.6481 ProteinModelPortal:Q7KTA0 SMR:Q7KTA0 STRING:Q7KTA0
PRIDE:Q7KTA0 EnsemblMetazoa:FBtr0080610 GeneID:34819
KEGG:dme:Dmel_CG8930 UCSC:CG8930-RA CTD:34819 FlyBase:FBgn0003255
InParanoid:Q7KTA0 OMA:WLITRKT OrthoDB:EOG4FN2ZQ PhylomeDB:Q7KTA0
GenomeRNAi:34819 NextBio:790377 ArrayExpress:Q7KTA0 Bgee:Q7KTA0
GO:GO:0007564 Uniprot:Q7KTA0
Length = 1360
Score = 225 (84.3 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 106/387 (27%), Positives = 167/387 (43%)
Query: 17 PGLITINLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNP 75
P L + L+ N I ++ AF L L +Q C L + PQ F L L L L+GN
Sbjct: 203 PNLEELTLSDNSIINMDPNAFYGLAKLKRLSLQNCGLKSLPPQSFQGLAQLTSLQLNGNA 262
Query: 76 LRIIEPGVFDPLTSLEYLMLNRCNLTYISPS-AFDNLNHLKTLELSQNKLK--SHIDW-- 130
L ++ L L L L NL Y P+ A L L+ L L N L + D+
Sbjct: 263 LVSLDGDCLGHLQKLRTLRLEG-NLFYRIPTNALAGLRTLEALNLGSNLLTIINDEDFPR 321
Query: 131 --TLV----------------LGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAEN 172
L+ L NL L L+L + IS+LP+ + + + L+ L++ N
Sbjct: 322 MPNLIVLLLKRNQIMKISAGALKNLTALKVLELDDNLISSLPEGL-SKLSQLQELSITSN 380
Query: 173 ELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSV 232
L ++ T L +++ LD + +S AF +KLR L LS +
Sbjct: 381 RLRWIN-DTELPRSMQMLDM----RANPLSTISPGAFRGMSKLRKLILSD--VRTLRSFP 433
Query: 233 ALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLD 292
L+ L L L G+ +PAN + L+ L++ N L LS L LD
Sbjct: 434 ELEACHALEILKLDRAGIQEVPANLCRQTPRLKSLELKTNSL--KRIPNLSSCRDLRLLD 491
Query: 293 MGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNET 352
+ + +++I F + L L+LS N+++ L FQ + L +L+L ++ +++
Sbjct: 492 LSSNQIEKIQGKPFNGLKQLNDLLLSYNRIKALPQDAFQGIPKLQLLDLEGNEISYIHKE 551
Query: 353 VFHENYTYPDLEELRLSGNPLHVLPDS 379
F +T LE+L L N LP+S
Sbjct: 552 AF-SGFTA--LEDLNLGNNIFPELPES 575
Score = 214 (80.4 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 109/395 (27%), Positives = 170/395 (43%)
Query: 52 LSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNL 111
L+K+ F L +L LS N + ++P F L L+ L L C L + P +F L
Sbjct: 191 LTKLEANSFFMAPNLEELTLSDNSIINMDPNAFYGLAKLKRLSLQNCGLKSLPPQSFQGL 250
Query: 112 NHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAE 171
L +L+L+ N L S +D LG+L KL TL L + +P N A L LNL
Sbjct: 251 AQLTSLQLNGNALVS-LDGDC-LGHLQKLRTLRLEGNLFYRIPTNALAGLRTLEALNLGS 308
Query: 172 NELIDL-DVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADL 230
N L + D NL+ L L N +K +S A N T L+ L L N +S+ L
Sbjct: 309 NLLTIINDEDFPRMPNLIVL--LLKRNQIMK--ISAGALKNLTALKVLELDDNLISS--L 362
Query: 231 SVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEH 290
L L++L LS+ + L + R +Q LD+ NPL + L
Sbjct: 363 PEGLSKLSQLQELSITSNRLRWINDTELPR--SMQMLDMRANPLSTISPGAFRGMSKLRK 420
Query: 291 LDMGYSNLQRISRSTFLKMT-SLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRL 349
L + S+++ + L+ +L+ L L ++ + + L + L LEL L R+
Sbjct: 421 LIL--SDVRTLRSFPELEACHALEILKLDRAGIQEVPANLCRQTPRLKSLELKTNSLKRI 478
Query: 350 NETVFHENYTYPDLEEL---RLSGNP---LHVLPDSTKQYS-MRTIPTQIWKNFDFLVIL 402
+ DL ++ G P L L D Y+ ++ +P ++ L +L
Sbjct: 479 PNLSSCRDLRLLDLSSNQIEKIQGKPFNGLKQLNDLLLSYNRIKALPQDAFQGIPKLQLL 538
Query: 403 FIL-NETVF-H-ENYT-YPDLEELRLSGNPLHVLP 433
+ NE + H E ++ + LE+L L N LP
Sbjct: 539 DLEGNEISYIHKEAFSGFTALEDLNLGNNIFPELP 573
Score = 188 (71.2 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 91/371 (24%), Positives = 164/371 (44%)
Query: 13 NLDNPGLITINLNANPIQPVEG-AFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDL 71
NL N ++ ++L N + +E +F +A +L L + + ++ ++P F L L +L L
Sbjct: 176 NLPNE-VVVLDLGNNNLTKLEANSFFMAPNLEELTLSDNSIINMDPNAFYGLAKLKRLSL 234
Query: 72 SGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWT 131
L+ + P F L L L LN L + +L L+TL L N L I T
Sbjct: 235 QNCGLKSLPPQSFQGLAQLTSLQLNGNALVSLDGDCLGHLQKLRTLRLEGN-LFYRIP-T 292
Query: 132 LVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLD 191
L L L+ L+L + ++ + D F L L L N+++ + +NL L
Sbjct: 293 NALAGLRTLEALNLGSNLLTIINDEDFPRMPNLIVLLLKRNQIMKISAGAL--KNLTALK 350
Query: 192 SLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLS 251
L+L + +L L E ++L+ L ++ N L + L P + + L +R LS
Sbjct: 351 VLELDD-NLISSLPE-GLSKLSQLQELSITSNRLRWIN-DTEL-PRS-MQMLDMRANPLS 405
Query: 252 RLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTS 311
+ F + L++L +S + +F L +LE L + + +Q + + +
Sbjct: 406 TISPGAFRGMSKLRKLILSDVRTLRSFPEL-EACHALEILKLDRAGIQEVPANLCRQTPR 464
Query: 312 LKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGN 371
LK+L L N L+ + + + L +L+L++ + ++ F+ L +L LS N
Sbjct: 465 LKSLELKTNSLKRIPN--LSSCRDLRLLDLSSNQIEKIQGKPFNG---LKQLNDLLLSYN 519
Query: 372 PLHVLPDSTKQ 382
+ LP Q
Sbjct: 520 RIKALPQDAFQ 530
Score = 177 (67.4 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 90/361 (24%), Positives = 148/361 (40%)
Query: 143 LDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKG 202
LDL + ++ L N F L L L++N +I++D G L L L L NC LK
Sbjct: 184 LDLGNNNLTKLEANSFFMAPNLEELTLSDNSIINMDPNAFYG--LAKLKRLSLQNCGLKS 241
Query: 203 PLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFT 262
L +F +L +L L+GN L + D L L KL L L R+P N
Sbjct: 242 -LPPQSFQGLAQLTSLQLNGNALVSLD-GDCLGHLQKLRTLRLEGNLFYRIPTNALAGLR 299
Query: 263 CLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKL 322
L+ L++ N L + +L L + + + +IS +T+LK L L N +
Sbjct: 300 TLEALNLGSNLLTIINDEDFPRMPNLIVLLLKRNQIMKISAGALKNLTALKVLELDDNLI 359
Query: 323 ETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVL-PDSTK 381
+L GL L+ L L + + L +N+T + ++ L + NPL + P + +
Sbjct: 360 SSLPEGL-SKLSQLQELSITSNRLRWINDTELPRS-----MQMLDMRANPLSTISPGAFR 413
Query: 382 QYS-MRTI---PTQIWKNFDFL-----VILFILNETVFHE---NYTY--PDLEELRLSGN 427
S +R + + ++F L + + L+ E N P L+ L L N
Sbjct: 414 GMSKLRKLILSDVRTLRSFPELEACHALEILKLDRAGIQEVPANLCRQTPRLKSLELKTN 473
Query: 428 PLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSF 487
L +P N +I+ + FN + + L L+ N + + +F
Sbjct: 474 SLKRIP--NLSSCRDLRLLDLSSN--QIEKIQGKPFNGLKQLNDLLLSYNRIKALPQDAF 529
Query: 488 Q 488
Q
Sbjct: 530 Q 530
Score = 171 (65.3 bits), Expect = 8.1e-09, P = 8.1e-09
Identities = 89/318 (27%), Positives = 145/318 (45%)
Query: 7 VYNDRRNLDNPGLITINLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTT 65
+ ND P LI + L N I + GA +L L + + +S + P+ + L+
Sbjct: 313 IINDEDFPRMPNLIVLLLKRNQIMKISAGALKNLTALKVLELDDNLISSL-PEGLSKLSQ 371
Query: 66 LNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNK-L 124
L +L ++ N LR I P S++ L + L+ ISP AF ++ L+ L LS + L
Sbjct: 372 LQELSITSNRLRWINDTEL-P-RSMQMLDMRANPLSTISPGAFRGMSKLRKLILSDVRTL 429
Query: 125 KSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLG 184
+S + L L+ L L ++GI +P N+ L++L L N L + ++
Sbjct: 430 RSFPE----LEACHALEILKLDRAGIQEVPANLCRQTPRLKSLELKTNSLKRIPNLSSCR 485
Query: 185 QNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLS 244
L LDLS+ ++ + F +L L LS N + A A + + KL L
Sbjct: 486 D----LRLLDLSSNQIE-KIQGKPFNGLKQLNDLLLSYNRIKALPQD-AFQGIPKLQLLD 539
Query: 245 LRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALL-SPLESLEHLDMGYSN--LQRI 301
L +S + F FT L++L++ +N F L S L +L HL ++N L+
Sbjct: 540 LEGNEISYIHKEAFSGFTALEDLNLGNN----IFPELPESGLRALLHLKT-FNNPKLREF 594
Query: 302 SR-STFLKMTSLKTLILS 318
TF + ++TLILS
Sbjct: 595 PPPDTFPR---IQTLILS 609
Score = 158 (60.7 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 96/374 (25%), Positives = 152/374 (40%)
Query: 19 LITINLNANPIQPVEGAFLV-ARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLR 77
L ++ LN N + ++G L + L L ++ +I L TL L+L N L
Sbjct: 253 LTSLQLNGNALVSLDGDCLGHLQKLRTLRLEGNLFYRIPTNALAGLRTLEALNLGSNLLT 312
Query: 78 IIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNL 137
II F + +L L+L R + IS A NL LK LEL N + S + L L
Sbjct: 313 IINDEDFPRMPNLIVLLLKRNQIMKISAGALKNLTALKVLELDDNLISSLPEGLSKLSQL 372
Query: 138 GKL-----------DT--------LDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLD 178
+L DT LD+R + +S + F + LR L L+ D+
Sbjct: 373 QELSITSNRLRWINDTELPRSMQMLDMRANPLSTISPGAFRGMSKLRKLILS-----DVR 427
Query: 179 VATTLGQ-NLVH-LDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKP 236
+ + H L+ L L ++ + + +L++L L N L L
Sbjct: 428 TLRSFPELEACHALEILKLDRAGIQ-EVPANLCRQTPRLKSLELKTNSLKRIP---NLSS 483
Query: 237 LTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYS 296
L L L + + ++ F+ L +L +S+N + + L+ LD+ +
Sbjct: 484 CRDLRLLDLSSNQIEKIQGKPFNGLKQLNDLLLSYNRIKALPQDAFQGIPKLQLLDLEGN 543
Query: 297 NLQRISRSTFLKMTSLKTLILSGNKLETL-ESGLFQNLTHLSVLELNNCGLTRLNETVFH 355
+ I + F T+L+ L L N L ESGL + L HL NN +L E F
Sbjct: 544 EISYIHKEAFSGFTALEDLNLGNNIFPELPESGL-RALLHLKTF--NN---PKLRE--FP 595
Query: 356 ENYTYPDLEELRLS 369
T+P ++ L LS
Sbjct: 596 PPDTFPRIQTLILS 609
>TAIR|locus:2137296 [details] [associations]
symbol:RLP46 "receptor like protein 46" species:3702
"Arabidopsis thaliana" [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006952 "defense response" evidence=ISS] [GO:0016301 "kinase
activity" evidence=ISS] [GO:0007165 "signal transduction"
evidence=IC] [GO:0000165 "MAPK cascade" evidence=RCA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0006612 "protein targeting to membrane" evidence=RCA]
[GO:0009617 "response to bacterium" evidence=RCA] [GO:0009862
"systemic acquired resistance, salicylic acid mediated signaling
pathway" evidence=RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=RCA] [GO:0010310 "regulation of
hydrogen peroxide metabolic process" evidence=RCA] [GO:0010363
"regulation of plant-type hypersensitive response" evidence=RCA]
[GO:0031348 "negative regulation of defense response" evidence=RCA]
[GO:0035304 "regulation of protein dephosphorylation" evidence=RCA]
Pfam:PF00560 InterPro:IPR001611 EMBL:CP002687 InterPro:IPR025875
Pfam:PF12799 InterPro:IPR013210 Pfam:PF08263 OMA:HTIACYL
IPI:IPI00523927 RefSeq:NP_192331.2 UniGene:At.54132
UniGene:At.65805 ProteinModelPortal:F4JGB6 SMR:F4JGB6 PRIDE:F4JGB6
EnsemblPlants:AT4G04220.1 GeneID:825737 KEGG:ath:AT4G04220
Uniprot:F4JGB6
Length = 811
Score = 226 (84.6 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 105/369 (28%), Positives = 171/369 (46%)
Query: 19 LITINLNANPIQ-PVEG-AFLVARSLLYLYMQECTLSKIN---PQFFTNLTTLNKLDLSG 73
L+ ++++ N IQ + G AF+ SL+ L M C ++ N P +LT L +LDLS
Sbjct: 107 LVGLDVSFNNIQGEIPGYAFVNLTSLISLDM--CC-NRFNGSIPHELFSLTNLQRLDLSR 163
Query: 74 NPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLV 133
N + G L +L+ L+L+ + PS +L L TL L QN S I ++
Sbjct: 164 NVIGGTLSGDIKELKNLQELILDENLIGGAIPSEIGSLVELLTLTLRQNMFNSSIPSSV- 222
Query: 134 LGNLGKLDTLDLRQSGISN-LPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDS 192
L KL T+DL+ + +S+ +PD++ N L L+L+ N+L + +++ NL +L++
Sbjct: 223 -SRLTKLKTIDLQNNFLSSKIPDDI-GNLVNLSTLSLSMNKLSG-GIPSSI-HNLKNLET 278
Query: 193 LDLSNCH-LKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLS 251
L L N + L G + KL+ L L GN + + + P KL LSLR+CGL
Sbjct: 279 LQLENNNGLSGEIPAAWLFGLQKLKVLRLEGNNKLQWNNNGYVFPQFKLTHLSLRSCGLE 338
Query: 252 RLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTS 311
+ T L LD+S N L F L+ L+ + ++ + + L + S
Sbjct: 339 GNIPDWLKNQTALVYLDLSINRLEGRFPKWLADLK-IRNITLSDNRLTGSLPPNLFQRPS 397
Query: 312 LKTLILSGNKLE-TLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSG 370
L L+LS N + + ++ + +L NN + DL + RLSG
Sbjct: 398 LYYLVLSRNNFSGQIPDTIGESQVMVLMLSENNFSGSVPKSITKIPFLKLLDLSKNRLSG 457
Query: 371 NPLHVLPDS 379
P+S
Sbjct: 458 EFPRFRPES 466
Score = 153 (58.9 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 78/320 (24%), Positives = 145/320 (45%)
Query: 44 YLYMQECTLSKINPQF--FTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLT 101
+L + + + ++++ +F F + L LD+S N P F TS+ L++++ N +
Sbjct: 444 FLKLLDLSKNRLSGEFPRFRPESYLEWLDISSNEFSGDVPAYFGGSTSM--LLMSQNNFS 501
Query: 102 YISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGIS-NLPDNVFAN 160
P F NL++L L+L NK+ + +L+ ++ L LR + + ++P+ + +N
Sbjct: 502 GEFPQNFRNLSYLIRLDLHDNKISGTVA-SLISQLSSSVEVLSLRNNSLKGSIPEGI-SN 559
Query: 161 NTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYL 220
T L+ L+L+EN L D + ++LG + S + S ++ S ++ + + L
Sbjct: 560 LTSLKVLDLSENNL-DGYLPSSLGNLTCMIKSPEPSAMTIRPYFS--SYTDIPNIERLI- 615
Query: 221 SGNPLSAADL-SVALKPLTKLHRLSLRNCGLSRL---PANTFH--------RFTCLQELD 268
+ + D+ S+ + L RN L L N H L+ L+
Sbjct: 616 ---EIESEDIFSLVVNWKNSKQVLFDRNFYLYTLLDLSKNKLHGEIPTSLGNLKSLKVLN 672
Query: 269 ISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETL--E 326
+S+N LE +E LD+ ++NL T K++ L TL L NKL+ E
Sbjct: 673 LSNNEFSGLIPQSFGDLEKVESLDLSHNNLTGEIPKTLSKLSELNTLDLRNNKLKGRIPE 732
Query: 327 SGLFQNLTHLSVLELNNCGL 346
S L + ++ NN G+
Sbjct: 733 SPQLDRLNNPNIYA-NNSGI 751
Score = 142 (55.0 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 123/485 (25%), Positives = 197/485 (40%)
Query: 9 NDRRNLDNPGLITINLNANPIQP-VEGAFLVARSLLYLYMQECT-LS-KINPQFFTNLTT 65
+D NL N L T++L+ N + + + ++L L ++ LS +I + L
Sbjct: 244 DDIGNLVN--LSTLSLSMNKLSGGIPSSIHNLKNLETLQLENNNGLSGEIPAAWLFGLQK 301
Query: 66 LNKLDLSGN-PLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKL 124
L L L GN L+ G P L +L L C L P N L L+LS N+L
Sbjct: 302 LKVLRLEGNNKLQWNNNGYVFPQFKLTHLSLRSCGLEGNIPDWLKNQTALVYLDLSINRL 361
Query: 125 KSHID-WTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTL 183
+ W L + + D R +G +LP N+F + L L L+ N + T+
Sbjct: 362 EGRFPKWLADL-KIRNITLSDNRLTG--SLPPNLFQRPS-LYYLVLSRNNFSG-QIPDTI 416
Query: 184 GQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRL 243
G++ V + L LS + G + + + L+ L LS N LS +P + L L
Sbjct: 417 GESQVMV--LMLSENNFSGSVPK-SITKIPFLKLLDLSKNRLSGE--FPRFRPESYLEWL 471
Query: 244 SLRNCGLSR-LPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRIS 302
+ + S +PA F T + L +S N F L L LD+ + +
Sbjct: 472 DISSNEFSGDVPAY-FGGSTSM--LLMSQNNFSGEFPQNFRNLSYLIRLDLHDNKISGTV 528
Query: 303 RSTFLKMTS-LKTLILSGNKLE-TLESGLFQNLTHLSVLELNNCGLTR-LNETVFHENYT 359
S +++S ++ L L N L+ ++ G+ NLT L VL+L+ L L ++ +
Sbjct: 529 ASLISQLSSSVEVLSLRNNSLKGSIPEGI-SNLTSLKVLDLSENNLDGYLPSSLGNLTCM 587
Query: 360 YPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHEN-YTYPD 418
E ++ P R I + F +V + +F N Y Y
Sbjct: 588 IKSPEPSAMTIRPYFSSYTDIPNIE-RLIEIESEDIFSLVVNWKNSKQVLFDRNFYLYTL 646
Query: 419 LEELRLSGNPLH-VLPT--GNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLA 475
L+ LS N LH +PT GN + L P F + + SL+L+
Sbjct: 647 LD---LSKNKLHGEIPTSLGNLKSLKVLNLSNN-----EFSGLIPQSFGDLEKVESLDLS 698
Query: 476 NNNLS 480
+NNL+
Sbjct: 699 HNNLT 703
Score = 136 (52.9 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 116/444 (26%), Positives = 184/444 (41%)
Query: 63 LTTLNKLDLSGNPLRIIEPG-VFDPLTSLEYLML--NRCNLTYISPSAFDNLNHLKTLEL 119
+ +L LD+S N ++ PG F LTSL L + NR N + P +L +L+ L+L
Sbjct: 104 INSLVGLDVSFNNIQGEIPGYAFVNLTSLISLDMCCNRFNGSI--PHELFSLTNLQRLDL 161
Query: 120 SQNKLKSHIDWTLV-LGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLD 178
S+N + + + L NL +L LD G +P + + L L L +N + +
Sbjct: 162 SRNVIGGTLSGDIKELKNLQEL-ILDENLIG-GAIPSEI-GSLVELLTLTLRQN-MFNSS 217
Query: 179 VATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLT 238
+ +++ + L L ++DL N L + +D N L TL LS N LS + ++ L
Sbjct: 218 IPSSVSR-LTKLKTIDLQNNFLSSKIPDD-IGNLVNLSTLSLSMNKLSGG-IPSSIHNLK 274
Query: 239 KLHRLSLRNC-GLS-RLPANTFHRFTCLQELDIS-HNPLIDAFTALLSPLESLEHLDMGY 295
L L L N GLS +PA L+ L + +N L + P L HL +
Sbjct: 275 NLETLQLENNNGLSGEIPAAWLFGLQKLKVLRLEGNNKLQWNNNGYVFPQFKLTHLSLRS 334
Query: 296 SNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLT--RLNETV 353
L+ T+L L LS N+LE G F L+ L++ N L+ RL ++
Sbjct: 335 CGLEGNIPDWLKNQTALVYLDLSINRLE----GRFPKW--LADLKIRNITLSDNRLTGSL 388
Query: 354 FHENYTYPDLEELRLSGNPLH-VLPDSTKQYSMR-----------TIPTQIWKNFDFLVI 401
+ P L L LS N +PD+ + + ++P I K FL +
Sbjct: 389 PPNLFQRPSLYYLVLSRNNFSGQIPDTIGESQVMVLMLSENNFSGSVPKSITK-IPFLKL 447
Query: 402 LFILNETVFHENYTY-PD--LEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYL 458
L + + E + P+ LE L +S N +G+
Sbjct: 448 LDLSKNRLSGEFPRFRPESYLEWLDISSNEF----SGDVPAYFGGSTSMLLMSQNNFSGE 503
Query: 459 PPNVFNNTRNITSLNLANNNLSMT 482
P F N + L+L +N +S T
Sbjct: 504 FPQNFRNLSYLIRLDLHDNKISGT 527
Score = 126 (49.4 bits), Expect = 0.00075, Sum P(2) = 0.00075
Identities = 86/324 (26%), Positives = 139/324 (42%)
Query: 23 NLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPG 82
NL I P E LV LL L +++ + P + LT L +DL N L P
Sbjct: 188 NLIGGAI-PSEIGSLV--ELLTLTLRQNMFNSSIPSSVSRLTKLKTIDLQNNFLSSKIPD 244
Query: 83 VFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNK-LKSHIDWTLVLGNLGKLD 141
L +L L L+ L+ PS+ NL +L+TL+L N L I + G L KL
Sbjct: 245 DIGNLVNLSTLSLSMNKLSGGIPSSIHNLKNLETLQLENNNGLSGEIPAAWLFG-LQKLK 303
Query: 142 TLDLRQSGISNLPDNVFANNTW-LRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHL 200
L L + +N + + L +L+L L + ++ L +N L LDLS L
Sbjct: 304 VLRLEGNNKLQWNNNGYVFPQFKLTHLSLRSCGL-EGNIPDWL-KNQTALVYLDLSINRL 361
Query: 201 KGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSL-RNCGLSRLPANTFH 259
+G + ++ K+R + LS N L+ + L L L+ L L RN ++P +T
Sbjct: 362 EGRFPK--WLADLKIRNITLSDNRLTGS-LPPNLFQRPSLYYLVLSRNNFSGQIP-DTIG 417
Query: 260 RFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSG 319
+ + L +S N + ++ + L+ LD+ + L F + L+ L +S
Sbjct: 418 E-SQVMVLMLSENNFSGSVPKSITKIPFLKLLDLSKNRLSG-EFPRFRPESYLEWLDISS 475
Query: 320 NKLETLESGLFQNLTHLSVLELNN 343
N+ F T + ++ NN
Sbjct: 476 NEFSGDVPAYFGGSTSMLLMSQNN 499
Score = 44 (20.5 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 460 PNVFNNTRNITSLNLANNNLSMTSELSF 487
P N +++ LNL+NN S SF
Sbjct: 659 PTSLGNLKSLKVLNLSNNEFSGLIPQSF 686
>FB|FBgn0038504 [details] [associations]
symbol:Sur-8 "Sur-8" species:7227 "Drosophila melanogaster"
[GO:0017016 "Ras GTPase binding" evidence=ISS] [GO:0000164 "protein
phosphatase type 1 complex" evidence=IEA] [GO:0046579 "positive
regulation of Ras protein signal transduction" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR027036 PROSITE:PS51450
EMBL:AE014297 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
InterPro:IPR025875 Pfam:PF12799 GeneTree:ENSGT00600000084236
OMA:LPHGIGN PANTHER:PTHR23155:SF38 ChiTaRS:SHOC2 EMBL:AY128499
EMBL:BT003235 RefSeq:NP_650620.3 RefSeq:NP_732231.2
UniGene:Dm.13957 ProteinModelPortal:Q9VEK6 SMR:Q9VEK6 STRING:Q9VEK6
PaxDb:Q9VEK6 PRIDE:Q9VEK6 EnsemblMetazoa:FBtr0083447
EnsemblMetazoa:FBtr0083448 EnsemblMetazoa:FBtr0333933 GeneID:42093
KEGG:dme:Dmel_CG5407 UCSC:CG5407-RA CTD:42093 FlyBase:FBgn0038504
InParanoid:Q8MQM0 OrthoDB:EOG4C867K PhylomeDB:Q9VEK6
GenomeRNAi:42093 NextBio:827133 Bgee:Q9VEK6 Uniprot:Q9VEK6
Length = 641
Score = 220 (82.5 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 91/313 (29%), Positives = 148/313 (47%)
Query: 66 LNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLK 125
L +L L N + + P + L SL L LN +LT + P + N + LK L+L NKL
Sbjct: 185 LTELYLYSNKIGQLPPEI-GCLVSLRNLALNENSLTSL-PESLQNCSQLKVLDLRHNKLA 242
Query: 126 SHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQ 185
+ V+ L L TL LR + I+ + D++ L L+L EN++ +L A +G
Sbjct: 243 ---EIPPVIYRLRSLTTLYLRFNRITAVADDL-RQLVNLTMLSLRENKIRELGSA--IGA 296
Query: 186 NLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSL 245
LV+L +LD+S+ HL+ L ED N L L L N L D+ ++ L L RL +
Sbjct: 297 -LVNLTTLDVSHNHLEH-LPED-IGNCVNLSALDLQHNEL--LDIPDSIGNLKSLVRLGM 351
Query: 246 RNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRST 305
R LS +PA T + E ++ N + +L+ L L + + +
Sbjct: 352 RYNRLSSVPA-TLKNCKSMDEFNVEGNGITQLPDGMLASLSGLTTITLSRNQFASYPTGG 410
Query: 306 FLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEE 365
+ T++ ++ L N+++ + G+F L+ L + LT L + T+ ++ E
Sbjct: 411 PAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDIG----TWVNMVE 466
Query: 366 LRLSGNPLHVLPD 378
L L+ N L LPD
Sbjct: 467 LNLATNALQKLPD 479
Score = 177 (67.4 bits), Expect = 6.5e-10, P = 6.5e-10
Identities = 97/364 (26%), Positives = 156/364 (42%)
Query: 19 LITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQF--FTNLTTLNKLDLSGNPL 76
L T+ L N I V +L L ++E + ++ NLTTL D+S N L
Sbjct: 254 LTTLYLRFNRITAVADDLRQLVNLTMLSLRENKIRELGSAIGALVNLTTL---DVSHNHL 310
Query: 77 RIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGN 136
+ P +L L L L I P + NL L L + N+L S + TL N
Sbjct: 311 EHL-PEDIGNCVNLSALDLQHNELLDI-PDSIGNLKSLVRLGMRYNRLSS-VPATLK--N 365
Query: 137 LGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLS 196
+D ++ +GI+ LPD + A+ + L + L+ N+ ++ S++L
Sbjct: 366 CKSMDEFNVEGNGITQLPDGMLASLSGLTTITLSRNQFASYPTGGPA--QFTNVYSINLE 423
Query: 197 NCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPAN 256
+ + + F A L L + N L+A L + + L+L L +LP +
Sbjct: 424 HNRID-KIPYGIFSRAKGLTKLNMKENMLTALPLDIGT--WVNMVELNLATNALQKLPDD 480
Query: 257 TFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLI 316
+ L+ L +S+N ++ + L L LD+ + ++ + L + L+ LI
Sbjct: 481 IMN-LQNLEILILSNN-MLKKIPNTIGNLRKLRILDLEENRIEVLPHEIGL-LHELQRLI 537
Query: 317 LSGNKLETLES--GLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNP-L 373
L N++ L G NLTHLSV E NN L L E + + LE L ++ NP L
Sbjct: 538 LQTNQITMLPRSIGHLGNLTHLSVSE-NN--LQFLPEEIG----SLESLENLYINQNPGL 590
Query: 374 HVLP 377
LP
Sbjct: 591 EKLP 594
Score = 123 (48.4 bits), Expect = 0.00048, P = 0.00048
Identities = 96/380 (25%), Positives = 148/380 (38%)
Query: 114 LKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENE 173
+K L+LS++ + + I T+ L L L + I LP + + LRNL L EN
Sbjct: 162 IKRLDLSKSSI-TVIPSTVK--ECVHLTELYLYSNKIGQLPPEIGCLVS-LRNLALNENS 217
Query: 174 LIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVA 233
L L + QN L LDL H K L TLYL N ++A ++
Sbjct: 218 LTSLPESL---QNCSQLKVLDLR--HNKLAEIPPVIYRLRSLTTLYLRFNRITA--VADD 270
Query: 234 LKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDM 293
L+ L L LSLR + L + L LD+SHN L + + +L LD+
Sbjct: 271 LRQLVNLTMLSLRENKIREL-GSAIGALVNLTTLDVSHNHL-EHLPEDIGNCVNLSALDL 328
Query: 294 GYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETV 353
++ L I S + SL L + N+L ++ + L +N + + G+T+L + +
Sbjct: 329 QHNELLDIPDSIG-NLKSLVRLGMRYNRLSSVPATL-KNCKSMDEFNVEGNGITQLPDGM 386
Query: 354 FHE--NYTYPDLEELRLSGNPLHVLPDSTKQYSMRT-------IPTQIWKNFDFLVILFI 404
T L + + P T YS+ IP I+ L L +
Sbjct: 387 LASLSGLTTITLSRNQFASYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNM 446
Query: 405 LNE--TVFHENY-TYPDLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPN 461
T + T+ ++ EL L+ N L LP KI PN
Sbjct: 447 KENMLTALPLDIGTWVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKI----PN 502
Query: 462 VFNNTRNITSLNLANNNLSM 481
N R + L+L N + +
Sbjct: 503 TIGNLRKLRILDLEENRIEV 522
>ZFIN|ZDB-GENE-030722-3 [details] [associations]
symbol:slit1a "slit homolog 1a (Drosophila)"
species:7955 "Danio rerio" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0007411 "axon guidance" evidence=NAS] [GO:0005576
"extracellular region" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IMP] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152
ZFIN:ZDB-GENE-030722-3 GO:GO:0007411 GO:GO:0005576
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 GO:GO:0045773 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 Pfam:PF12661
GO:GO:0051964 Pfam:PF01463 HOVERGEN:HBG057959 KO:K06838
EMBL:DQ177286 IPI:IPI00506990 RefSeq:NP_001030140.1
UniGene:Dr.88478 ProteinModelPortal:Q3S2J2 SMR:Q3S2J2 STRING:Q3S2J2
GeneID:556123 KEGG:dre:556123 CTD:556123 NextBio:20881326
Uniprot:Q3S2J2
Length = 1524
Score = 195 (73.7 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 93/378 (24%), Positives = 154/378 (40%)
Query: 22 INLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIE 80
+ LN N + + F + L L + E + + F + L +L L+ N L +
Sbjct: 59 LELNGNNLTRINRNDFTGLKYLRVLQLMENQIVTVERGAFDEMRELERLRLNRNQLHQLP 118
Query: 81 PGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKL 140
+F +L L L+ + I AF +K L+L +N + S I+ G L
Sbjct: 119 ELLFQKNAALSRLDLSENFIQAIPRKAFRGATDIKNLQLDKNHI-SCIEDGAFRAMRG-L 176
Query: 141 DTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDL-SNCH 199
+ L L + IS++P + F + LR L N L+ V + L Q L ++ L + C
Sbjct: 177 EVLTLNNNNISSIPVSSFNHMPKLRTFRLHSNNLVCDCVLSWLSQWLRERPNIGLFTQCS 236
Query: 200 LKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALK----PLTKLHRLSLRNC---GLSR 252
PL V + SG SA S +L P ++ +C G +
Sbjct: 237 SPAPL-RGLNVAEVQKHEFSCSGQSDSAVGQSCSLSSGSCPAVCSCNNNIVDCRGKGPTL 295
Query: 253 LPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSL 312
+P++ T E+ + N + SP + L +D+ + + ++ F + SL
Sbjct: 296 IPSSLPDSMT---EIRLEQNSIKSIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSL 352
Query: 313 KTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNP 372
+L+L GNK+ L G+F L L +L LN + L F + +L L L N
Sbjct: 353 NSLVLYGNKITDLPRGVFDGLHALQLLLLNANKIHCLRANTFQD---LQNLSLLSLYDNK 409
Query: 373 LHVLPDSTKQYSMRTIPT 390
+ L T S+R I T
Sbjct: 410 IQTLAKGTFS-SLRAIQT 426
Score = 189 (71.6 bits), Expect = 6.2e-14, Sum P(2) = 6.2e-14
Identities = 85/336 (25%), Positives = 143/336 (42%)
Query: 22 INLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIE 80
+ LN N + + E F +L L + E + I + F T + L L N + IE
Sbjct: 107 LRLNRNQLHQLPELLFQKNAALSRLDLSENFIQAIPRKAFRGATDIKNLQLDKNHISCIE 166
Query: 81 PGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKL 140
G F + LE L LN N++ I S+F+++ L+T L N L + + L +
Sbjct: 167 DGAFRAMRGLEVLTLNNNNISSIPVSSFNHMPKLRTFRLHSNNLVCDCVLSWLSQWLRER 226
Query: 141 DTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVA----TTLGQNL--------- 187
+ L S P LR LN+AE + + + + +GQ+
Sbjct: 227 PNIGLFTQCSSPAP---------LRGLNVAEVQKHEFSCSGQSDSAVGQSCSLSSGSCPA 277
Query: 188 VHLDSLDLSNCHLKGP-LSEDAFVNA-TKLRTLYLSGNPLSAADLSVALKPLTKLHRLSL 245
V + ++ +C KGP L + ++ T++R L N + + A P KL R+ L
Sbjct: 278 VCSCNNNIVDCRGKGPTLIPSSLPDSMTEIR---LEQNSIKSIPPG-AFSPYKKLRRIDL 333
Query: 246 RNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRST 305
N +S L + F L L + N + D + L +L+ L + + + + +T
Sbjct: 334 SNNQISELAPDAFQGLRSLNSLVLYGNKITDLPRGVFDGLHALQLLLLNANKIHCLRANT 393
Query: 306 FLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLEL 341
F + +L L L NK++TL G F +L + L L
Sbjct: 394 FQDLQNLSLLSLYDNKIQTLAKGTFSSLRAIQTLHL 429
Score = 187 (70.9 bits), Expect = 5.9e-12, Sum P(2) = 5.9e-12
Identities = 83/340 (24%), Positives = 147/340 (43%)
Query: 17 PGLIT-INLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGN 74
P +T I L N I+ + GAF + L + + +S++ P F L +LN L L GN
Sbjct: 301 PDSMTEIRLEQNSIKSIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 360
Query: 75 PLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVL 134
+ + GVFD L +L+ L+LN + + + F +L +L L L NK+++ T
Sbjct: 361 KITDLPRGVFDGLHALQLLLLNANKIHCLRANTFQDLQNLSLLSLYDNKIQTLAKGTF-- 418
Query: 135 GNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLD 194
+L + TL L Q+ P N WL + L N + T + L +
Sbjct: 419 SSLRAIQTLHLAQN-----PFICDCNLKWLADY-LRSNPIETSGARCTSPRRLANKRIGQ 472
Query: 195 LSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLP 254
+ + + E + T+ L N + + A K + + + N L R+P
Sbjct: 473 IKSKKFRCSAKEQYAIPGTEDSRL---NNDCNNDPVCPA-KCRCESNVVDCSNLRLDRIP 528
Query: 255 ANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKT 314
+ T L+ + I+A A + L L+ +++ + + I F +S+
Sbjct: 529 EHV-PASTTEPRLNNNEITTIEAMGAFKT-LTHLKKINLSNNKISEIEDGAFEGASSVNE 586
Query: 315 LILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVF 354
L L+ N+L+ SG+F+ L L +L L N ++ ++ F
Sbjct: 587 LHLTANQLDLAHSGMFRGLEGLRMLMLRNNRISCIHNNSF 626
Score = 129 (50.5 bits), Expect = 3.1e-13, Sum P(3) = 3.1e-13
Identities = 41/149 (27%), Positives = 70/149 (46%)
Query: 193 LDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSR 252
+D SN L + E + T+ R L+ N ++ + A K LT L +++L N +S
Sbjct: 517 VDCSNLRLDR-IPEHVPASTTEPR---LNNNEITTIEAMGAFKTLTHLKKINLSNNKISE 572
Query: 253 LPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSL 312
+ F + + EL ++ N L A + + LE L L + + + I ++F + ++
Sbjct: 573 IEDGAFEGASSVNELHLTANQLDLAHSGMFRGLEGLRMLMLRNNRISCIHNNSFTGLHNV 632
Query: 313 KTLILSGNKLETLESGLFQNLTHLSVLEL 341
+ L L N L T+ G F L LS L L
Sbjct: 633 RLLSLYDNTLTTIAPGAFDTLQSLSTLNL 661
Score = 127 (49.8 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 39/128 (30%), Positives = 61/128 (47%)
Query: 247 NCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTF 306
N L LP T T EL + N L LS +SL+ +D+ + + ++ S+F
Sbjct: 742 NKHLQALPKGTPRNIT---ELYLDGNQL-STVPKELSSFKSLQLVDLSNNRISSLTNSSF 797
Query: 307 LKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEEL 366
M+ L TLILS N L + + F L L +L L+ ++ L + +F + + L L
Sbjct: 798 TNMSQLTTLILSYNALRCIPTLAFSGLRSLRLLSLHGNDISELPDGIFSDAQS---LSHL 854
Query: 367 RLSGNPLH 374
+ NPLH
Sbjct: 855 AIGANPLH 862
Score = 122 (48.0 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 41/145 (28%), Positives = 67/145 (46%)
Query: 24 LNANPIQPVE--GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEP 81
LN N I +E GAF L + + +S+I F +++N+L L+ N L +
Sbjct: 540 LNNNEITTIEAMGAFKTLTHLKKINLSNNKISEIEDGAFEGASSVNELHLTANQLDLAHS 599
Query: 82 GVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLD 141
G+F L L LML ++ I ++F L++++ L L N L + L L
Sbjct: 600 GMFRGLEGLRMLMLRNNRISCIHNNSFTGLHNVRLLSLYDNTLTTIAPGAF--DTLQSLS 657
Query: 142 TLDLRQSGISNLPDNVFANNTWLRN 166
TL+L + N + ++WLRN
Sbjct: 658 TLNLLANPF-NCNCRLAWLSSWLRN 681
Score = 120 (47.3 bits), Expect = 3.1e-13, Sum P(3) = 3.1e-13
Identities = 42/144 (29%), Positives = 64/144 (44%)
Query: 38 VARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNR 97
+ R+ L + L++IN FT L L L L N + +E G FD + LE L LNR
Sbjct: 52 IPRNTERLELNGNNLTRINRNDFTGLKYLRVLQLMENQIVTVERGAFDEMRELERLRLNR 111
Query: 98 CNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNV 157
L + F L L+LS+N +++ I G + L L ++ IS + D
Sbjct: 112 NQLHQLPELLFQKNAALSRLDLSENFIQA-IPRKAFRGATD-IKNLQLDKNHISCIEDGA 169
Query: 158 FANNTWLRNLNLAENELIDLDVAT 181
F L L L N + + V++
Sbjct: 170 FRAMRGLEVLTLNNNNISSIPVSS 193
Score = 117 (46.2 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 31/89 (34%), Positives = 47/89 (52%)
Query: 289 EHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTR 348
E L++ +NL RI+R+ F + L+ L L N++ T+E G F + L L LN L +
Sbjct: 57 ERLELNGNNLTRINRNDFTGLKYLRVLQLMENQIVTVERGAFDEMRELERLRLNRNQLHQ 116
Query: 349 LNETVFHENYTYPDLEELRLSGNPLHVLP 377
L E +F +N L L LS N + +P
Sbjct: 117 LPELLFQKNAA---LSRLDLSENFIQAIP 142
Score = 114 (45.2 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 46/180 (25%), Positives = 80/180 (44%)
Query: 141 DTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHL 200
+ +D + +P++V A+ T R LN NE+ ++ + L HL ++LSN +
Sbjct: 515 NVVDCSNLRLDRIPEHVPASTTEPR-LN--NNEITTIEAMGAF-KTLTHLKKINLSNNKI 570
Query: 201 KGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHR 260
+ + AF A+ + L+L+ N L A S + L L L LRN +S + N+F
Sbjct: 571 S-EIEDGAFEGASSVNELHLTANQLDLAH-SGMFRGLEGLRMLMLRNNRISCIHNNSFTG 628
Query: 261 FTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGN 320
++ L + N L L+SL L++ + R +L I++GN
Sbjct: 629 LHNVRLLSLYDNTLTTIAPGAFDTLQSLSTLNLLANPFNCNCRLAWLSSWLRNRKIVTGN 688
Score = 108 (43.1 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 33/139 (23%), Positives = 60/139 (43%)
Query: 242 RLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRI 301
RL L L+R+ N F L+ L + N ++ + LE L + + L ++
Sbjct: 58 RLELNGNNLTRINRNDFTGLKYLRVLQLMENQIVTVERGAFDEMRELERLRLNRNQLHQL 117
Query: 302 SRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYP 361
F K +L L LS N ++ + F+ T + L+L+ ++ + + F
Sbjct: 118 PELLFQKNAALSRLDLSENFIQAIPRKAFRGATDIKNLQLDKNHISCIEDGAFR---AMR 174
Query: 362 DLEELRLSGNPLHVLPDST 380
LE L L+ N + +P S+
Sbjct: 175 GLEVLTLNNNNISSIPVSS 193
Score = 105 (42.0 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 46/181 (25%), Positives = 71/181 (39%)
Query: 142 TLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLK 201
T+D G+ N+P N+ NT L L N L ++ G L +L L L +
Sbjct: 37 TVDCHGLGLKNIPRNI-PRNT--ERLELNGNNLTRINRNDFTG--LKYLRVLQLMENQIV 91
Query: 202 GPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRF 261
+ AF +L L L+ N L + + L RL L + +P F
Sbjct: 92 -TVERGAFDEMRELERLRLNRNQLHQLP-ELLFQKNAALSRLDLSENFIQAIPRKAFRGA 149
Query: 262 TCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNK 321
T ++ L + N + + LE L + +N+ I S+F M L+T L N
Sbjct: 150 TDIKNLQLDKNHISCIEDGAFRAMRGLEVLTLNNNNISSIPVSSFNHMPKLRTFRLHSNN 209
Query: 322 L 322
L
Sbjct: 210 L 210
Score = 92 (37.4 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 40/134 (29%), Positives = 57/134 (42%)
Query: 196 SNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPA 255
SN HL+ L + N T+L YL GN LS L L + L N +S L
Sbjct: 741 SNKHLQA-LPKGTPRNITEL---YLDGNQLSTVPKE--LSSFKSLQLVDLSNNRISSLTN 794
Query: 256 NTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTL 315
++F + L L +S+N L T S L SL L + +++ + F SL L
Sbjct: 795 SSFTNMSQLTTLILSYNALRCIPTLAFSGLRSLRLLSLHGNDISELPDGIFSDAQSLSHL 854
Query: 316 ILSGNKLETLESGL 329
+ N L + GL
Sbjct: 855 AIGANPLHC-DCGL 867
Score = 83 (34.3 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 26/133 (19%), Positives = 48/133 (36%)
Query: 415 TYPDLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNL 474
T L+++ LS N + + G ++D +F + L L
Sbjct: 556 TLTHLKKINLSNNKISEIEDGAFEGASSVNELHLTAN--QLDLAHSGMFRGLEGLRMLML 613
Query: 475 ANNNLSMTSELSFQFXXXXXXXXXXXXXXXXXTHISPTVLRHNRAITSIKLVGNPWKCDC 534
NN +S SF T I+P ++++++ L+ NP+ C+C
Sbjct: 614 RNNRISCIHNNSF---TGLHNVRLLSLYDNTLTTIAPGAFDTLQSLSTLNLLANPFNCNC 670
Query: 535 NIADMWEWATREK 547
+A + W K
Sbjct: 671 RLAWLSSWLRNRK 683
Score = 74 (31.1 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 72/331 (21%), Positives = 124/331 (37%)
Query: 158 FANNTWLRNLNLAENELIDLDVATTLGQ---NLVHLDSLDLSNCHLKGPLSEDAFVNATK 214
F T L+ +NL+ N++ +++ G N +HL + L H F
Sbjct: 554 FKTLTHLKKINLSNNKISEIEDGAFEGASSVNELHLTANQLDLAH------SGMFRGLEG 607
Query: 215 LRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPL 274
LR L L N +S + + L + LSL + L+ + F L L++ NP
Sbjct: 608 LRMLMLRNNRISCIHNN-SFTGLHNVRLLSLYDNTLTTIAPGAFDTLQSLSTLNLLANPF 666
Query: 275 IDAFTALLSPLES-LEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLET-LESGLFQN 332
L+ L S L + + N R R FLK L+ + + E E
Sbjct: 667 --NCNCRLAWLSSWLRNRKIVTGN-PRCHRPAFLKEIPLQDVAAPDFRCEDDHEDVSCAP 723
Query: 333 LTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQI 392
H +C T L V N L+ L G P ++ + T+P ++
Sbjct: 724 PVHCPA----DC--TCLESVVRCSN---KHLQALP-KGTPRNITELYLDGNQLSTVPKEL 773
Query: 393 WKNFDFLVILFILNETVFH-ENYTYPDLEELR---LSGNPLHVLPTGNXXXXXXXXXXXX 448
+F L ++ + N + N ++ ++ +L LS N L +PT
Sbjct: 774 -SSFKSLQLVDLSNNRISSLTNSSFTNMSQLTTLILSYNALRCIPT--LAFSGLRSLRLL 830
Query: 449 XXXXCKIDYLPPNVFNNTRNITSLNLANNNL 479
I LP +F++ ++++ L + N L
Sbjct: 831 SLHGNDISELPDGIFSDAQSLSHLAIGANPL 861
Score = 66 (28.3 bits), Expect = 3.1e-13, Sum P(3) = 3.1e-13
Identities = 24/125 (19%), Positives = 45/125 (36%)
Query: 418 DLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANN 477
++ EL L GN L +P +I L + F N +T+L L+ N
Sbjct: 755 NITELYLDGNQLSTVPK---ELSSFKSLQLVDLSNNRISSLTNSSFTNMSQLTTLILSYN 811
Query: 478 NLSMTSELSFQFXXXXXXXXXXXXXXXXXTHISPTVLRHNRAITSIKLVGNPWKCDCNIA 537
L L+F + + + ++++ + + NP CDC +
Sbjct: 812 ALRCIPTLAFS---GLRSLRLLSLHGNDISELPDGIFSDAQSLSHLAIGANPLHCDCGLR 868
Query: 538 DMWEW 542
+ +W
Sbjct: 869 WLSDW 873
Score = 59 (25.8 bits), Expect = 4.4e-12, Sum P(2) = 4.4e-12
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 518 RAITSIKLVGNPWKCDCNI 536
RAI ++ L NP+ CDCN+
Sbjct: 422 RAIQTLHLAQNPFICDCNL 440
Score = 53 (23.7 bits), Expect = 7.4e-05, Sum P(3) = 7.4e-05
Identities = 10/34 (29%), Positives = 20/34 (58%)
Query: 455 IDYLPPNVFNNTRNITSLNLANNNLSMTSELSFQ 488
I +PP F+ + + ++L+NN +S + +FQ
Sbjct: 314 IKSIPPGAFSPYKKLRRIDLSNNQISELAPDAFQ 347
Score = 50 (22.7 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 18/69 (26%), Positives = 29/69 (42%)
Query: 419 LEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNN 478
L L L GN + LP G KI L N F + +N++ L+L +N
Sbjct: 352 LNSLVLYGNKITDLPRGVFDGLHALQLLLLNAN--KIHCLRANTFQDLQNLSLLSLYDNK 409
Query: 479 LSMTSELSF 487
+ ++ +F
Sbjct: 410 IQTLAKGTF 418
Score = 42 (19.8 bits), Expect = 8.4e-11, Sum P(3) = 8.4e-11
Identities = 12/21 (57%), Positives = 13/21 (61%)
Query: 467 RNITSLNLANNNLS-MTSELS 486
RNIT L L N LS + ELS
Sbjct: 754 RNITELYLDGNQLSTVPKELS 774
Score = 41 (19.5 bits), Expect = 3.2e-10, Sum P(2) = 3.2e-10
Identities = 7/26 (26%), Positives = 15/26 (57%)
Query: 463 FNNTRNITSLNLANNNLSMTSELSFQ 488
F ++ +NL+NN +S + +F+
Sbjct: 554 FKTLTHLKKINLSNNKISEIEDGAFE 579
>UNIPROTKB|G5E9B3 [details] [associations]
symbol:LGR4 "Leucine-rich repeat-containing G
protein-coupled receptor 4, isoform CRA_a" species:9606 "Homo
sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016500 "protein-hormone receptor activity" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 EMBL:CH471064
InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0016500 EMBL:AC090597 UniGene:Hs.502176
HGNC:HGNC:13299 ChiTaRS:LGR4 EMBL:AC100771
ProteinModelPortal:G5E9B3 SMR:G5E9B3 Ensembl:ENST00000389858
ArrayExpress:G5E9B3 Bgee:G5E9B3 Uniprot:G5E9B3
Length = 927
Score = 222 (83.2 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 90/344 (26%), Positives = 159/344 (46%)
Query: 19 LITINLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLR 77
L ++ L+AN I V E +F L +L++ + +L+++ +NL TL L L+ N +
Sbjct: 107 LQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSLTEVPVHPLSNLPTLQALTLALNKIS 166
Query: 78 IIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNL 137
I F L+SL L L+ + +S FD L++L+TL+L+ N L ++ + L
Sbjct: 167 SIPDFAFTNLSSLVVLHLHNNKIRSLSQHCFDGLDNLETLDLNYNNLG---EFPQAIKAL 223
Query: 138 GKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSN 197
L L + IS +PD F N LR ++L +N L + +G + H S DL +
Sbjct: 224 PSLKELGFHSNSISVIPDGAFDGNPLLRTIHLYDNPL------SFVGNSAFHNLS-DLHS 276
Query: 198 CHLKGPLSEDAFVNAT---KLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLP 254
++G F N T L +L L+G +S+ ++ + L L L + LP
Sbjct: 277 LVIRGASMVQQFPNLTGTVHLESLTLTGTKISSIPNNLCQEQ-KMLRTLDLSYNNIRDLP 335
Query: 255 ANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKT 314
+ F+ L+E+ + N + L SL LD+ + + I F + +
Sbjct: 336 S--FNGCHALEEISLQRNQIYQIKEGTFQGLISLRILDLSRNLIHEIHSRAFATLGPITN 393
Query: 315 LILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENY 358
L +S N+L + + + L L+ L+L G +L E + +++
Sbjct: 394 LDVSFNELTSFPT---EGLNGLNQLKL--VGNFKLKEALAAKDF 432
Score = 212 (79.7 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 88/341 (25%), Positives = 146/341 (42%)
Query: 40 RSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCN 99
+ L L +Q L + + L+ L L L N + + F+ L L +L L+ +
Sbjct: 81 KELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNS 140
Query: 100 LTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFA 159
LT + NL L+ L L+ NK+ S D+ NL L L L + I +L + F
Sbjct: 141 LTEVPVHPLSNLPTLQALTLALNKISSIPDFAFT--NLSSLVVLHLHNNKIRSLSQHCFD 198
Query: 160 NNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLY 219
L L+L N L + A + L L L + + + + AF LRT++
Sbjct: 199 GLDNLETLDLNYNNLGEFPQAI---KALPSLKELGFHSNSIS-VIPDGAFDGNPLLRTIH 254
Query: 220 LSGNPLSAADLSVALKPLTKLHRLSLRNCGL-SRLP--ANTFHRFTCLQELDISHNPLID 276
L NPLS S A L+ LH L +R + + P T H L+ L ++ +
Sbjct: 255 LYDNPLSFVGNS-AFHNLSDLHSLVIRGASMVQQFPNLTGTVH----LESLTLTGTKISS 309
Query: 277 AFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHL 336
L + L LD+ Y+N++ + +F +L+ + L N++ ++ G FQ L L
Sbjct: 310 IPNNLCQEQKMLRTLDLSYNNIRDLP--SFNGCHALEEISLQRNQIYQIKEGTFQGLISL 367
Query: 337 SVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLP 377
+L+L+ + ++ F T + L +S N L P
Sbjct: 368 RILDLSRNLIHEIHSRAFA---TLGPITNLDVSFNELTSFP 405
Score = 194 (73.4 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 86/316 (27%), Positives = 139/316 (43%)
Query: 69 LDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHI 128
L L+GN L I P L L+ L L L + A L+ L++L L N + S
Sbjct: 62 LQLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHITSVP 121
Query: 129 DWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDL-DVATTLGQNL 187
+ + L +L L L + ++ +P + +N L+ L LA N++ + D A T NL
Sbjct: 122 EDSFE--GLVQLRHLWLDDNSLTEVPVHPLSNLPTLQALTLALNKISSIPDFAFT---NL 176
Query: 188 VHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRN 247
L L L N ++ LS+ F L TL L+ N L + A+K L L L +
Sbjct: 177 SSLVVLHLHNNKIRS-LSQHCFDGLDNLETLDLNYNNLG--EFPQAIKALPSLKELGFHS 233
Query: 248 CGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDM-GYSNLQRISRSTF 306
+S +P F L+ + + NPL + L L L + G S +Q+ T
Sbjct: 234 NSISVIPDGAFDGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHSLVIRGASMVQQFPNLT- 292
Query: 307 LKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEEL 366
L++L L+G K+ ++ + L Q L L+L+ + L F+ + LEE+
Sbjct: 293 -GTVHLESLTLTGTKISSIPNNLCQEQKMLRTLDLSYNNIRDLPS--FNGCHA---LEEI 346
Query: 367 RLSGNPLHVLPDSTKQ 382
L N ++ + + T Q
Sbjct: 347 SLQRNQIYQIKEGTFQ 362
Score = 189 (71.6 bits), Expect = 5.6e-11, P = 5.6e-11
Identities = 89/324 (27%), Positives = 143/324 (44%)
Query: 52 LSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNL 111
LS I+P+ + L L L L N L+ + L++L+ L L+ ++T + +F+ L
Sbjct: 69 LSFIHPKALSGLKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGL 128
Query: 112 NHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAE 171
L+ L L N L + + L NL L L L + IS++PD F N + L L+L
Sbjct: 129 VQLRHLWLDDNSL-TEVP-VHPLSNLPTLQALTLALNKISSIPDFAFTNLSSLVVLHLHN 186
Query: 172 NELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAA-DL 230
N++ L G L +L++LDL+ +L G + A L+ L N +S D
Sbjct: 187 NKIRSLSQHCFDG--LDNLETLDLNYNNL-GEFPQ-AIKALPSLKELGFHSNSISVIPDG 242
Query: 231 SVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEH 290
+ PL L + L + LS + + FH + L L I ++ F L + LE
Sbjct: 243 AFDGNPL--LRTIHLYDNPLSFVGNSAFHNLSDLHSLVIRGASMVQQFPNLTGTVH-LES 299
Query: 291 LDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLN 350
L + + + I + + L+TL LS N + L S F L + L + ++
Sbjct: 300 LTLTGTKISSIPNNLCQEQKMLRTLDLSYNNIRDLPS--FNGCHALEEISLQRNQIYQIK 357
Query: 351 ETVFHENYTYPDLEELRLSGNPLH 374
E F + L L LS N +H
Sbjct: 358 EGTFQGLIS---LRILDLSRNLIH 378
Score = 169 (64.5 bits), Expect = 8.2e-09, P = 8.2e-09
Identities = 75/288 (26%), Positives = 122/288 (42%)
Query: 194 DLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRL 253
DLS H K A +L+ L L N L S A++ L+ L L L ++ +
Sbjct: 68 DLSFIHPK------ALSGLKELKVLTLQNNQLKTVP-SEAIRGLSALQSLRLDANHITSV 120
Query: 254 PANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLK 313
P ++F L+ L + N L + LS L +L+ L + + + I F ++SL
Sbjct: 121 PEDSFEGLVQLRHLWLDDNSLTEVPVHPLSNLPTLQALTLALNKISSIPDFAFTNLSSLV 180
Query: 314 TLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPL 373
L L NK+ +L F L +L L+LN L + + P L+EL N +
Sbjct: 181 VLHLHNNKIRSLSQHCFDGLDNLETLDLNYNNLGEFPQAI----KALPSLKELGFHSNSI 236
Query: 374 HVLPDSTKQYS--MRTIPTQIWKNFDFLVILFILNETVFHENYTYPDLEELRLSGNPLHV 431
V+PD + +RTI ++ N + F+ N + FH N + DL L + G + V
Sbjct: 237 SVIPDGAFDGNPLLRTI--HLYDN----PLSFVGN-SAFH-NLS--DLHSLVIRGASM-V 285
Query: 432 LPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNL 479
N KI +P N+ + + +L+L+ NN+
Sbjct: 286 QQFPNLTGTVHLESLTLTGT--KISSIPNNLCQEQKMLRTLDLSYNNI 331
>UNIPROTKB|Q9BXB1 [details] [associations]
symbol:LGR4 "Leucine-rich repeat-containing G-protein
coupled receptor 4" species:9606 "Homo sapiens" [GO:0016500
"protein-hormone receptor activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030539 "male genitalia
development" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0050673 "epithelial cell proliferation" evidence=IEA]
[GO:0061290 "canonical Wnt receptor signaling pathway involved in
metanephric kidney development" evidence=IEA] [GO:0072202 "cell
differentiation involved in metanephros development" evidence=IEA]
[GO:0072224 "metanephric glomerulus development" evidence=IEA]
[GO:0072282 "metanephric nephron tubule morphogenesis"
evidence=IEA] [GO:0090190 "positive regulation of branching
involved in ureteric bud morphogenesis" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0004930 "G-protein coupled
receptor activity" evidence=TAS] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000276 InterPro:IPR002131 InterPro:IPR017452
Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373 PROSITE:PS00237
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886
GO:GO:0045892 GO:GO:0045893 EMBL:CH471064 GO:GO:0004930
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0030539
GO:GO:0090190 GO:GO:0050673 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0016500 GO:GO:0061290 GO:GO:0072282
EMBL:AF346711 EMBL:AF346709 EMBL:AF346710 EMBL:AF257182
EMBL:AC090597 IPI:IPI00217954 RefSeq:NP_060960.2 UniGene:Hs.502176
ProteinModelPortal:Q9BXB1 SMR:Q9BXB1 DIP:DIP-59894N STRING:Q9BXB1
PhosphoSite:Q9BXB1 DMDM:212286375 PaxDb:Q9BXB1 PRIDE:Q9BXB1
DNASU:55366 Ensembl:ENST00000379214 GeneID:55366 KEGG:hsa:55366
UCSC:uc001mrj.4 CTD:55366 GeneCards:GC11M027345 H-InvDB:HIX0009517
HGNC:HGNC:13299 HPA:HPA030267 MIM:606666 neXtProt:NX_Q9BXB1
PharmGKB:PA28893 HOVERGEN:HBG031675 InParanoid:Q9BXB1 KO:K04309
OMA:DGYWSDC OrthoDB:EOG476JZH ChiTaRS:LGR4 GenomeRNAi:55366
NextBio:59753 ArrayExpress:Q9BXB1 Bgee:Q9BXB1 CleanEx:HS_LGR4
Genevestigator:Q9BXB1 GermOnline:ENSG00000205213 GO:GO:0072202
GO:GO:0072224 Uniprot:Q9BXB1
Length = 951
Score = 222 (83.2 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 90/344 (26%), Positives = 159/344 (46%)
Query: 19 LITINLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLR 77
L ++ L+AN I V E +F L +L++ + +L+++ +NL TL L L+ N +
Sbjct: 131 LQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSLTEVPVHPLSNLPTLQALTLALNKIS 190
Query: 78 IIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNL 137
I F L+SL L L+ + +S FD L++L+TL+L+ N L ++ + L
Sbjct: 191 SIPDFAFTNLSSLVVLHLHNNKIRSLSQHCFDGLDNLETLDLNYNNLG---EFPQAIKAL 247
Query: 138 GKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSN 197
L L + IS +PD F N LR ++L +N L + +G + H S DL +
Sbjct: 248 PSLKELGFHSNSISVIPDGAFDGNPLLRTIHLYDNPL------SFVGNSAFHNLS-DLHS 300
Query: 198 CHLKGPLSEDAFVNAT---KLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLP 254
++G F N T L +L L+G +S+ ++ + L L L + LP
Sbjct: 301 LVIRGASMVQQFPNLTGTVHLESLTLTGTKISSIPNNLCQEQ-KMLRTLDLSYNNIRDLP 359
Query: 255 ANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKT 314
+ F+ L+E+ + N + L SL LD+ + + I F + +
Sbjct: 360 S--FNGCHALEEISLQRNQIYQIKEGTFQGLISLRILDLSRNLIHEIHSRAFATLGPITN 417
Query: 315 LILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENY 358
L +S N+L + + + L L+ L+L G +L E + +++
Sbjct: 418 LDVSFNELTSFPT---EGLNGLNQLKL--VGNFKLKEALAAKDF 456
Score = 214 (80.4 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 93/365 (25%), Positives = 154/365 (42%)
Query: 17 PGLITINLNANPIQPVEGAFLVA-RSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNP 75
P L + L N + + L + L L +Q L + + L+ L L L N
Sbjct: 81 PFLEELQLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANH 140
Query: 76 LRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLG 135
+ + F+ L L +L L+ +LT + NL L+ L L+ NK+ S D+
Sbjct: 141 ITSVPEDSFEGLVQLRHLWLDDNSLTEVPVHPLSNLPTLQALTLALNKISSIPDFAFT-- 198
Query: 136 NLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDL 195
NL L L L + I +L + F L L+L N L + A + L L L
Sbjct: 199 NLSSLVVLHLHNNKIRSLSQHCFDGLDNLETLDLNYNNLGEFPQAI---KALPSLKELGF 255
Query: 196 SNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGL-SRLP 254
+ + + + AF LRT++L NPLS S A L+ LH L +R + + P
Sbjct: 256 HSNSIS-VIPDGAFDGNPLLRTIHLYDNPLSFVGNS-AFHNLSDLHSLVIRGASMVQQFP 313
Query: 255 --ANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSL 312
T H L+ L ++ + L + L LD+ Y+N++ + +F +L
Sbjct: 314 NLTGTVH----LESLTLTGTKISSIPNNLCQEQKMLRTLDLSYNNIRDLP--SFNGCHAL 367
Query: 313 KTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNP 372
+ + L N++ ++ G FQ L L +L+L+ + ++ F T + L +S N
Sbjct: 368 EEISLQRNQIYQIKEGTFQGLISLRILDLSRNLIHEIHSRAFA---TLGPITNLDVSFNE 424
Query: 373 LHVLP 377
L P
Sbjct: 425 LTSFP 429
Score = 208 (78.3 bits), Expect = 5.1e-13, P = 5.1e-13
Identities = 89/333 (26%), Positives = 147/333 (44%)
Query: 52 LSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNL 111
++++ F N L +L L+GN L I P L L+ L L L + A L
Sbjct: 69 ITQLPEDAFKNFPFLEELQLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAIRGL 128
Query: 112 NHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAE 171
+ L++L L N + S + + L +L L L + ++ +P + +N L+ L LA
Sbjct: 129 SALQSLRLDANHITSVPEDSFE--GLVQLRHLWLDDNSLTEVPVHPLSNLPTLQALTLAL 186
Query: 172 NELIDL-DVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADL 230
N++ + D A T NL L L L N ++ LS+ F L TL L+ N L +
Sbjct: 187 NKISSIPDFAFT---NLSSLVVLHLHNNKIRS-LSQHCFDGLDNLETLDLNYNNLG--EF 240
Query: 231 SVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEH 290
A+K L L L + +S +P F L+ + + NPL + L L
Sbjct: 241 PQAIKALPSLKELGFHSNSISVIPDGAFDGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHS 300
Query: 291 LDM-GYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRL 349
L + G S +Q+ T L++L L+G K+ ++ + L Q L L+L+ + L
Sbjct: 301 LVIRGASMVQQFPNLT--GTVHLESLTLTGTKISSIPNNLCQEQKMLRTLDLSYNNIRDL 358
Query: 350 NETVFHENYTYPDLEELRLSGNPLHVLPDSTKQ 382
F+ + LEE+ L N ++ + + T Q
Sbjct: 359 PS--FNGCHA---LEEISLQRNQIYQIKEGTFQ 386
Score = 196 (74.1 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 98/356 (27%), Positives = 156/356 (43%)
Query: 20 ITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRII 79
+ I++N N Q E AF L L + LS I+P+ + L L L L N L+ +
Sbjct: 62 LDISMN-NITQLPEDAFKNFPFLEELQLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTV 120
Query: 80 EPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGK 139
L++L+ L L+ ++T + +F+ L L+ L L N L + + L NL
Sbjct: 121 PSEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSL-TEVP-VHPLSNLPT 178
Query: 140 LDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCH 199
L L L + IS++PD F N + L L+L N++ L G L +L++LDL+ +
Sbjct: 179 LQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIRSLSQHCFDG--LDNLETLDLNYNN 236
Query: 200 LKGPLSEDAFVNATKLRTLYLSGNPLSAA-DLSVALKPLTKLHRLSLRNCGLSRLPANTF 258
L G + A L+ L N +S D + PL L + L + LS + + F
Sbjct: 237 L-GEFPQ-AIKALPSLKELGFHSNSISVIPDGAFDGNPL--LRTIHLYDNPLSFVGNSAF 292
Query: 259 HRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILS 318
H + L L I ++ F L + LE L + + + I + + L+TL LS
Sbjct: 293 HNLSDLHSLVIRGASMVQQFPNLTGTVH-LESLTLTGTKISSIPNNLCQEQKMLRTLDLS 351
Query: 319 GNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLH 374
N + L S F L + L + ++ E F + L L LS N +H
Sbjct: 352 YNNIRDLPS--FNGCHALEEISLQRNQIYQIKEGTFQGLIS---LRILDLSRNLIH 402
Score = 182 (69.1 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 82/339 (24%), Positives = 145/339 (42%)
Query: 143 LDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKG 202
+D G++ +P+ + A + + L+++ N + L +N L+ L L+ L
Sbjct: 41 VDCSGKGLTAVPEGLSA---FTQALDISMNNITQLPEDAF--KNFPFLEELQLAGNDLSF 95
Query: 203 PLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFT 262
+ A +L+ L L N L S A++ L+ L L L ++ +P ++F
Sbjct: 96 -IHPKALSGLKELKVLTLQNNQLKTVP-SEAIRGLSALQSLRLDANHITSVPEDSFEGLV 153
Query: 263 CLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKL 322
L+ L + N L + LS L +L+ L + + + I F ++SL L L NK+
Sbjct: 154 QLRHLWLDDNSLTEVPVHPLSNLPTLQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKI 213
Query: 323 ETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQ 382
+L F L +L L+LN L + + P L+EL N + V+PD
Sbjct: 214 RSLSQHCFDGLDNLETLDLNYNNLGEFPQAI----KALPSLKELGFHSNSISVIPDGAFD 269
Query: 383 YS--MRTIPTQIWKNFDFLVILFILNETVFHENYTYPDLEELRLSGNPLHVLPTGNXXXX 440
+ +RTI ++ N + F+ N + FH N + DL L + G + V N
Sbjct: 270 GNPLLRTI--HLYDN----PLSFVGN-SAFH-NLS--DLHSLVIRGASM-VQQFPNLTGT 318
Query: 441 XXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNL 479
KI +P N+ + + +L+L+ NN+
Sbjct: 319 VHLESLTLTGT--KISSIPNNLCQEQKMLRTLDLSYNNI 355
>TAIR|locus:2205005 [details] [associations]
symbol:RLP7 "AT1G47890" species:3702 "Arabidopsis
thaliana" [GO:0006952 "defense response" evidence=ISS] [GO:0016301
"kinase activity" evidence=ISS] [GO:0007165 "signal transduction"
evidence=IC;RCA] [GO:0002237 "response to molecule of bacterial
origin" evidence=RCA] [GO:0010103 "stomatal complex morphogenesis"
evidence=RCA] [GO:0048443 "stamen development" evidence=RCA]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 EMBL:CP002684
GenomeReviews:CT485782_GR eggNOG:COG4886 InterPro:IPR025875
Pfam:PF12799 HSSP:P25147 InterPro:IPR013210 Pfam:PF08263
EMBL:AC079679 HOGENOM:HOG000116562 ProtClustDB:CLSN2681899
IPI:IPI00518642 PIR:C96519 RefSeq:NP_175225.1 UniGene:At.52064
ProteinModelPortal:Q9C699 SMR:Q9C699 EnsemblPlants:AT1G47890.1
GeneID:841206 KEGG:ath:AT1G47890 TAIR:At1g47890 InParanoid:Q9C699
OMA:KESLAIN PhylomeDB:Q9C699 Genevestigator:Q9C699 Uniprot:Q9C699
Length = 1019
Score = 222 (83.2 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 94/359 (26%), Positives = 164/359 (45%)
Query: 17 PGLITINLNANPIQP---VEGAFLVARSLLYLYMQECTLSKINP---QFFTNLTTLNKLD 70
P L I+L+ N + +E F++ +L Y+ +K+ P F++L L L
Sbjct: 443 PSLTRIHLSYNQLNDLVGIENIFMLP-NLETFYIYHYNYTKVRPLDLNVFSSLKQLGTLY 501
Query: 71 LSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHI-D 129
+S P+ P ++LEYL L CN+T P +L+ L+LS NK+K + D
Sbjct: 502 ISRIPISTTNITSDFP-SNLEYLSLRSCNITDF-PEFIRKGRNLQILDLSNNKIKGQVPD 559
Query: 130 WTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVH 189
W L + L+++DL + +S +V A+ E++L +D+++ Q +
Sbjct: 560 W---LWRMPTLNSVDLSNNSLSGFHVSVKAS---------PESQLTSVDLSSNAFQGPLF 607
Query: 190 LDSLDL-----SNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPL-TKLHRL 243
L S L SN + G + + + L L LS N L+ + L L+ L + L L
Sbjct: 608 LPSKSLRYFSGSNNNFTGKIPR-SICGLSSLEILDLSNNNLNGS-LPWCLETLMSSLSDL 665
Query: 244 SLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISR 303
LRN LS F T L+ LD+SHN + L+ SLE L++G + + +
Sbjct: 666 DLRNNSLSGSLPEIFMNATKLRSLDVSHNRMEGKLPGSLTGCSSLEVLNVGSNRINDMFP 725
Query: 304 STFLKMTSLKTLILSGNKLE-TLES--GLFQNLTHLSVLELNNCGLTRLNETVFHENYT 359
+ L+ L+L NK TL + G++ L ++++++ + + + N+T
Sbjct: 726 FELNSLQKLQVLVLHSNKFHGTLHNVDGVWFGFPQLQIIDVSHNDFFGILPSDYFMNWT 784
Score = 214 (80.4 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 88/323 (27%), Positives = 146/323 (45%)
Query: 57 PQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKT 116
P NL L +LD+S + P F + SL L LN CNL PS+ + +L++
Sbjct: 220 PLLARNLRNLRELDMSYVKISSEIPEEFSNIRSLRSLNLNGCNLFGEFPSSILLIPNLQS 279
Query: 117 LELSQN-KLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELI 175
++L N L+ ++ +L KL L SG +PD++ + L +L L+ +
Sbjct: 280 IDLGNNPNLRGNLPVFHENNSLLKLTILYTSFSGA--IPDSISSLKN-LTSLTLSVSYFS 336
Query: 176 DLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALK 235
+ +LG NL HL L LS+ +L G + + N +L Y+ GN LS +L L
Sbjct: 337 G-KIPFSLG-NLSHLSHLSLSSNNLIGEIPS-SIGNLNQLTNFYVGGNKLSG-NLPATLS 392
Query: 236 PLTKLHRLSLR-NCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMG 294
LTKL+ +SL N LP + + + L+ NP I A + L + SL + +
Sbjct: 393 NLTKLNTISLSSNQFTGSLPPS-ISQLSKLKFFFADDNPFIGAILSPLLKIPSLTRIHLS 451
Query: 295 YSNLQR-ISRSTFLKMTSLKTLIL---SGNKLETLESGLFQNLTHLSVLELNNCGLTRLN 350
Y+ L + + +L+T + + K+ L+ +F +L L L ++ ++ N
Sbjct: 452 YNQLNDLVGIENIFMLPNLETFYIYHYNYTKVRPLDLNVFSSLKQLGTLYISRIPISTTN 511
Query: 351 ETV-FHENYTYPDLEELRLSGNP 372
T F N Y L ++ P
Sbjct: 512 ITSDFPSNLEYLSLRSCNITDFP 534
Score = 164 (62.8 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 93/335 (27%), Positives = 148/335 (44%)
Query: 12 RNLDNPGLITINLNANPIQP-VEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLD 70
RNL N L ++++ I + F RSL L + C L P + L +D
Sbjct: 224 RNLRN--LRELDMSYVKISSEIPEEFSNIRSLRSLNLNGCNLFGEFPSSILLIPNLQSID 281
Query: 71 LSGNP-LRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHID 129
L NP LR P VF SL L + + + P + +L +L +L LS + I
Sbjct: 282 LGNNPNLRGNLP-VFHENNSLLKLTILYTSFSGAIPDSISSLKNLTSLTLSVSYFSGKIP 340
Query: 130 WTLVLGNLGKLDTLDLRQSG-ISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLV 188
++L GNL L L L + I +P ++ N L N + N+L ++ TL NL
Sbjct: 341 FSL--GNLSHLSHLSLSSNNLIGEIPSSI-GNLNQLTNFYVGGNKLSG-NLPATLS-NLT 395
Query: 189 HLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALK-P-LTKLHRLSLR 246
L+++ LS+ G L + +KL+ + NP A LS LK P LT++H LS
Sbjct: 396 KLNTISLSSNQFTGSLPP-SISQLSKLKFFFADDNPFIGAILSPLLKIPSLTRIH-LSYN 453
Query: 247 NC----GLSR---LP-ANTFH----RFTCLQELDIS-HNPLIDAFTALLSPLE-SLEHLD 292
G+ LP TF+ +T ++ LD++ + L T +S + S ++
Sbjct: 454 QLNDLVGIENIFMLPNLETFYIYHYNYTKVRPLDLNVFSSLKQLGTLYISRIPISTTNIT 513
Query: 293 MGY-SNLQRISRSTFLKMTSLKTLILSGNKLETLE 326
+ SNL+ +S + +T I G L+ L+
Sbjct: 514 SDFPSNLEYLSLRS-CNITDFPEFIRKGRNLQILD 547
Score = 145 (56.1 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 72/273 (26%), Positives = 117/273 (42%)
Query: 87 LTSLEYLM-LNRCNLTYIS---PSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDT 142
L L +L LN N + + P+ FD L L+ L+LSQ+ L I L+ L KL +
Sbjct: 138 LFKLRHLRDLNLANNNFNNSPIPAEFDKLTGLERLDLSQSSLSGQIPINLL--QLTKLVS 195
Query: 143 LDLRQSGISNLPDNVF----ANNTWL----RNL-NLAENELIDLDVATTLGQ---NLVHL 190
LDL S D F + ++L RNL NL E ++ + +++ + + N+ L
Sbjct: 196 LDLSSSDFFG--DESFHYLSIDKSFLPLLARNLRNLRELDMSYVKISSEIPEEFSNIRSL 253
Query: 191 DSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGL 250
SL+L+ C+L G + L+++ L NP +L V L +L++
Sbjct: 254 RSLNLNGCNLFGEFPSSILL-IPNLQSIDLGNNPNLRGNLPV-FHENNSLLKLTILYTSF 311
Query: 251 SRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMT 310
S ++ L L +S + L L L HL + +NL S+ +
Sbjct: 312 SGAIPDSISSLKNLTSLTLSVSYFSGKIPFSLGNLSHLSHLSLSSNNLIGEIPSSIGNLN 371
Query: 311 SLKTLILSGNKLETLESGLFQNLTHLSVLELNN 343
L + GNKL NLT L+ + L++
Sbjct: 372 QLTNFYVGGNKLSGNLPATLSNLTKLNTISLSS 404
Score = 140 (54.3 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 64/202 (31%), Positives = 90/202 (44%)
Query: 193 LDLSNCHLKGPL-SEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLS 251
LDLS+ L G L S + LR L L+ N + + + LT L RL L LS
Sbjct: 121 LDLSSIFLYGQLKSNSSLFKLRHLRDLNLANNNFNNSPIPAEFDKLTGLERLDLSQSSLS 180
Query: 252 -RLPANTFHRFTCLQELDIS----------HNPLID-AFTALLSP-LESLEHLDMGYSNL 298
++P N + T L LD+S H ID +F LL+ L +L LDM Y +
Sbjct: 181 GQIPINLL-QLTKLVSLDLSSSDFFGDESFHYLSIDKSFLPLLARNLRNLRELDMSYVKI 239
Query: 299 QRISRSTFLKMTSLKTLILSG-NKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHEN 357
F + SL++L L+G N S + + +L ++L N R N VFHEN
Sbjct: 240 SSEIPEEFSNIRSLRSLNLNGCNLFGEFPSSILL-IPNLQSIDLGNNPNLRGNLPVFHEN 298
Query: 358 YTYPDLEELRLSGNPLHVLPDS 379
+ L L S + +PDS
Sbjct: 299 NSLLKLTILYTSFSG--AIPDS 318
Score = 138 (53.6 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 100/446 (22%), Positives = 186/446 (41%)
Query: 62 NLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQ 121
NL T + +R ++ VF L L L ++R ++ + ++ D ++L+ L L
Sbjct: 469 NLETFYIYHYNYTKVRPLDLNVFSSLKQLGTLYISRIPISTTNITS-DFPSNLEYLSLRS 527
Query: 122 NKLKSHIDWTLVLGNLGKLDTLDLRQSGISN-LPDNVFANNTWLRNLNLAENELIDLDVA 180
+ D+ + L LDL + I +PD ++ T L +++L+ N L V+
Sbjct: 528 CNIT---DFPEFIRKGRNLQILDLSNNKIKGQVPDWLWRMPT-LNSVDLSNNSLSGFHVS 583
Query: 181 TTLGQNLVHLDSLDLSNCHLKGPL------------SEDAFVNA--------TKLRTLYL 220
L S+DLS+ +GPL S + F + L L L
Sbjct: 584 VKASPES-QLTSVDLSSNAFQGPLFLPSKSLRYFSGSNNNFTGKIPRSICGLSSLEILDL 642
Query: 221 SGNPLSAADLSVALKPL-TKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFT 279
S N L+ + L L+ L + L L LRN LS F T L+ LD+SHN +
Sbjct: 643 SNNNLNGS-LPWCLETLMSSLSDLDLRNNSLSGSLPEIFMNATKLRSLDVSHNRMEGKLP 701
Query: 280 ALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLE-TLES--GLFQNLTHL 336
L+ SLE L++G + + + + L+ L+L NK TL + G++ L
Sbjct: 702 GSLTGCSSLEVLNVGSNRINDMFPFELNSLQKLQVLVLHSNKFHGTLHNVDGVWFGFPQL 761
Query: 337 SVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNF 396
++++++ + + + N+T ++ N ++ P+ + P+ +
Sbjct: 762 QIIDVSHNDFFGILPSDYFMNWTAMSSKK----DN--NIEPEYIQN------PSVYGSSL 809
Query: 397 DFLVILFILNETVFHENYTYPDL-EELRLSGNPLH-VLPTGNXXXXXXXXXXXXXXXXCK 454
+ L ++++ V E + + LSGN LH +P
Sbjct: 810 GYYTSLVLMSKGVSMEMERVLTIYTAIDLSGNQLHGKIPDSIGLLKELRILNMSSNGFT- 868
Query: 455 IDYLPPNVFNNTRNITSLNLANNNLS 480
++P ++ N +N+ SL+++ NN+S
Sbjct: 869 -GHIPSSLAN-LKNLESLDISQNNIS 892
Score = 134 (52.2 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 81/295 (27%), Positives = 118/295 (40%)
Query: 104 SPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISN-LPDNVFANNT 162
S S+ L HL+ L L+ N + L L+ LDL QS +S +P N+ T
Sbjct: 134 SNSSLFKLRHLRDLNLANNNFNNS-PIPAEFDKLTGLERLDLSQSSLSGQIPINLL-QLT 191
Query: 163 WLRNLNLAENEL----------IDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNA 212
L +L+L+ ++ ID L +NL +L LD+S + + E+ F N
Sbjct: 192 KLVSLDLSSSDFFGDESFHYLSIDKSFLPLLARNLRNLRELDMSYVKISSEIPEE-FSNI 250
Query: 213 TKLRTLYLSG-NPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISH 271
LR+L L+G N S+ L P L + L N R FH L +L I +
Sbjct: 251 RSLRSLNLNGCNLFGEFPSSILLIP--NLQSIDLGNNPNLRGNLPVFHENNSLLKLTILY 308
Query: 272 NPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQ 331
A +S L++L L + S + ++ L L LS N L
Sbjct: 309 TSFSGAIPDSISSLKNLTSLTLSVSYFSGKIPFSLGNLSHLSHLSLSSNNLIGEIPSSIG 368
Query: 332 NLTHLSVLELNNCGLT-RLNETVFHENYTYPDLEELRLSGNPLH-VLPDSTKQYS 384
NL L+ + L+ L T+ N T L + LS N LP S Q S
Sbjct: 369 NLNQLTNFYVGGNKLSGNLPATL--SNLT--KLNTISLSSNQFTGSLPPSISQLS 419
Score = 133 (51.9 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 79/316 (25%), Positives = 136/316 (43%)
Query: 17 PGLITINLNANP-IQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNP 75
P L +I+L NP ++ F SLL L + + S P ++L L L LS +
Sbjct: 275 PNLQSIDLGNNPNLRGNLPVFHENNSLLKLTILYTSFSGAIPDSISSLKNLTSLTLSVSY 334
Query: 76 LRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLG 135
P L+ L +L L+ NL PS+ NLN L + NKL ++ TL
Sbjct: 335 FSGKIPFSLGNLSHLSHLSLSSNNLIGEIPSSIGNLNQLTNFYVGGNKLSGNLPATL--S 392
Query: 136 NLGKLDTLDLRQSGIS-NLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLD 194
NL KL+T+ L + + +LP ++ + + L+ +N I ++ L + L +
Sbjct: 393 NLTKLNTISLSSNQFTGSLPPSI-SQLSKLKFFFADDNPFIGAILSPLL--KIPSLTRIH 449
Query: 195 LSNCHLKGPLSEDAFVNATKLRTLYL---SGNPLSAADLSV--ALKPLTKLH--RLSLRN 247
LS L + + L T Y+ + + DL+V +LK L L+ R+ +
Sbjct: 450 LSYNQLNDLVGIENIFMLPNLETFYIYHYNYTKVRPLDLNVFSSLKQLGTLYISRIPIST 509
Query: 248 CGL-SRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTF 306
+ S P+N L+ L + + D F + +L+ LD+ + ++
Sbjct: 510 TNITSDFPSN-------LEYLSLRSCNITD-FPEFIRKGRNLQILDLSNNKIKGQVPDWL 561
Query: 307 LKMTSLKTLILSGNKL 322
+M +L ++ LS N L
Sbjct: 562 WRMPTLNSVDLSNNSL 577
>ZFIN|ZDB-GENE-010306-3 [details] [associations]
symbol:slit2 "slit (Drosophila) homolog 2"
species:7955 "Danio rerio" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IMP] [GO:0033564
"anterior/posterior axon guidance" evidence=IMP] [GO:0007414
"axonal defasciculation" evidence=IMP] [GO:0001763 "morphogenesis
of a branching structure" evidence=IMP] [GO:0003262 "endocardial
progenitor cell migration to the midline involved in heart field
formation" evidence=IGI] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0030517 "negative regulation of axon extension"
evidence=IGI;IMP] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152
ZFIN:ZDB-GENE-010306-3 GO:GO:0005576 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0030517 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 HSSP:P00740 Pfam:PF12661 GO:GO:0001763
GO:GO:0007414 Pfam:PF01463 GO:GO:0033564 HOGENOM:HOG000116120
HOVERGEN:HBG057959 CTD:9353 KO:K06839 OrthoDB:EOG4D7Z4T
GO:GO:0003262 EMBL:AF210321 EMBL:CU638813 IPI:IPI00491594
RefSeq:NP_571810.1 UniGene:Dr.10489 SMR:Q9DE36 IntAct:Q9DE36
GeneID:80353 KEGG:dre:80353 NextBio:20934061 Uniprot:Q9DE36
Length = 1512
Score = 187 (70.9 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
Identities = 87/361 (24%), Positives = 152/361 (42%)
Query: 19 LITINLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLR 77
L + L N I +E GAF + L L + L + F T L +LDLS N ++
Sbjct: 74 LRVLQLMENKISSIERGAFQDLQELERLRLNRNNLQVLPELLFLGTTKLFRLDLSENQIQ 133
Query: 78 IIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNL 137
I F T ++ L L+ ++ I AF L L+ L L+ N + S + ++
Sbjct: 134 GIPRKAFRGSTEIKNLQLDYNQISCIEDGAFRALGDLEVLTLNNNNI-SRLS-VASFNHM 191
Query: 138 GKLDTLDLRQSGISNLPD-NVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLS 196
KL T L + + L D NV + WLR + + G N+ + +
Sbjct: 192 PKLRTFRLHSNNL--LCDCNVAWLSDWLRQRPRLGLYTQCMAPPSLRGHNIAEVQKKEFM 249
Query: 197 NCHLKGPLSEDA--FVNATKLRTLYLSGNPLSAADLSVALKPLT---KLHRLSLRNCGLS 251
C GP S + + +L T S N + + P + + L +
Sbjct: 250 -C--TGPQSHSSCSVLQCPELCTC--SNNVVDCRGKGLTEIPTNLPETITEIRLEQNSIK 304
Query: 252 RLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTS 311
+PA F + L+ +D+S+N + + + L SL L + + + + + F + S
Sbjct: 305 IIPAGAFAPYKRLRRIDLSNNQITELASDSFQGLRSLNSLVLYGNKITELPKGLFDGLFS 364
Query: 312 LKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGN 371
L+ L+L+ NK+ L FQ+L +L++L L + L + + F + ++ L L+ N
Sbjct: 365 LQLLLLNANKINCLRVDSFQDLQNLNLLSLYDNKLQTIAKGTFS---SLRAIQTLHLAQN 421
Query: 372 P 372
P
Sbjct: 422 P 422
Score = 155 (59.6 bits), Expect = 5.1e-11, Sum P(2) = 5.1e-11
Identities = 87/347 (25%), Positives = 142/347 (40%)
Query: 38 VARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNR 97
+ R++ L + L+KI F L L L L N + IE G F L LE L LNR
Sbjct: 46 IPRNVERLDLNANNLTKITKADFAGLKNLRVLQLMENKISSIERGAFQDLQELERLRLNR 105
Query: 98 CNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNV 157
NL + F L L+LS+N+++ I G+ ++ L L + IS + D
Sbjct: 106 NNLQVLPELLFLGTTKLFRLDLSENQIQG-IPRKAFRGST-EIKNLQLDYNQISCIEDGA 163
Query: 158 FANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRT 217
F L L L N + L VA+ N H+ L H L + N L
Sbjct: 164 FRALGDLEVLTLNNNNISRLSVASF---N--HMPKLRTFRLHSNNLLCD---CNVAWLSD 215
Query: 218 LYLSGNPLSAADLSVALKPLTKLHRLS-LRNCGLSRLPANTFHRFTCLQ--ELDISHNPL 274
+L P P + H ++ ++ + + LQ EL N +
Sbjct: 216 -WLRQRPRLGLYTQCMAPPSLRGHNIAEVQKKEFMCTGPQSHSSCSVLQCPELCTCSNNV 274
Query: 275 IDA----FTALLSPL-ESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGL 329
+D T + + L E++ + + ++++ I F L+ + LS N++ L S
Sbjct: 275 VDCRGKGLTEIPTNLPETITEIRLEQNSIKIIPAGAFAPYKRLRRIDLSNNQITELASDS 334
Query: 330 FQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVL 376
FQ L L+ L L +T L + +F ++ L+ L L+ N ++ L
Sbjct: 335 FQGLRSLNSLVLYGNKITELPKGLFDGLFS---LQLLLLNANKINCL 378
Score = 152 (58.6 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 84/316 (26%), Positives = 130/316 (41%)
Query: 17 PGLITINLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNP 75
P L INL+ N I +E G F A + L + L ++ L L L L N
Sbjct: 541 PQLRKINLSNNKITDIEEGTFEGASGVNELILTSNRLEGVHYSMLKGLGGLRTLMLRSNR 600
Query: 76 LRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKS--HIDWTLV 133
+ + G F L+S+ L L +T +SP AFD L+ L TL L N H+ W
Sbjct: 601 ISCVNNGSFTGLSSVRLLSLYDNLITSMSPGAFDTLHSLSTLNLLANPFNCNCHLAW--- 657
Query: 134 LGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNL---NLAENELIDLDVATTLGQNLVHL 190
LG + + +G F ++++ + A E D + + L +
Sbjct: 658 LGEWLRKKRI---VTGNPRCQSPYFLKEIPIQDVAVQDFACEEGNDENSCSPLARCPAEC 714
Query: 191 DSLD-LSNCHLKG--PLSEDAFVNATKLRTLYLSGNPLSAADLSVA-LKPLTKLHRLSLR 246
LD + C KG L + + T+L YL GN + L ++ K LT + L
Sbjct: 715 SCLDTVVRCSNKGLKVLPKGIPRDVTEL---YLDGNEFTQVPLELSNYKHLTLI---DLS 768
Query: 247 NCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTF 306
N +S L ++F + L L +S+N L L+SL L + +++ I F
Sbjct: 769 NNQISTLSNHSFSNMSELLTLILSYNRLRCIPAKAFDGLKSLRLLSLHGNDIAVIPDGAF 828
Query: 307 LKMTSLKTLILSGNKL 322
++SL L L N L
Sbjct: 829 KDLSSLSHLALGANPL 844
Score = 138 (53.6 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 42/134 (31%), Positives = 67/134 (50%)
Query: 17 PGLIT-INLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGN 74
P IT I L N I+ + GAF + L + + ++++ F L +LN L L GN
Sbjct: 290 PETITEIRLEQNSIKIIPAGAFAPYKRLRRIDLSNNQITELASDSFQGLRSLNSLVLYGN 349
Query: 75 PLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVL 134
+ + G+FD L SL+ L+LN + + +F +L +L L L NKL++ T
Sbjct: 350 KITELPKGLFDGLFSLQLLLLNANKINCLRVDSFQDLQNLNLLSLYDNKLQTIAKGTF-- 407
Query: 135 GNLGKLDTLDLRQS 148
+L + TL L Q+
Sbjct: 408 SSLRAIQTLHLAQN 421
Score = 138 (53.6 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 86/341 (25%), Positives = 145/341 (42%)
Query: 52 LSKINPQFFTNLTTLNKLDLSGNPLRIIEP-GVFDPLTSLEYLMLNRCNLTYISPSAFDN 110
L+KI P T +L L+ N ++E G+F L L + L+ +T I F+
Sbjct: 507 LTKI-PDHIPQYTA--ELRLNNNEFTVLEATGIFKKLPQLRKINLSNNKITDIEEGTFEG 563
Query: 111 LNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLA 170
+ + L L+ N+L+ + ++++ G LG L TL LR + IS + + F + +R L+L
Sbjct: 564 ASGVNELILTSNRLEG-VHYSMLKG-LGGLRTLMLRSNRISCVNNGSFTGLSSVRLLSLY 621
Query: 171 ENELIDLDVATTLGQNLVHLDSLDL------SNCHLK--GP-LSEDAFVNAT-KLRTLY- 219
+N + + L L +L+L NCHL G L + V + ++ Y
Sbjct: 622 DNLITSMSPGAF--DTLHSLSTLNLLANPFNCNCHLAWLGEWLRKKRIVTGNPRCQSPYF 679
Query: 220 LSGNPLSAADLSVALKPLTKLHRLSLRNCG-LSRLPANTFHRFTCLQELDISHNPLIDAF 278
L P+ VA++ +C L+R PA +CL + N +
Sbjct: 680 LKEIPIQ----DVAVQDFACEEGNDENSCSPLARCPAEC----SCLDTVVRCSNKGLKVL 731
Query: 279 TALLSPLESLE-HLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLS 337
+ P + E +LD + S + +T + LS N++ TL + F N++ L
Sbjct: 732 PKGI-PRDVTELYLDGNEFTQVPLELSNYKHLTLID---LSNNQISTLSNHSFSNMSELL 787
Query: 338 VLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPD 378
L L+ L + F L L L GN + V+PD
Sbjct: 788 TLILSYNRLRCIPAKAFDG---LKSLRLLSLHGNDIAVIPD 825
Score = 122 (48.0 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 34/108 (31%), Positives = 56/108 (51%)
Query: 287 SLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGL 346
++E LD+ +NL +I+++ F + +L+ L L NK+ ++E G FQ+L L L LN L
Sbjct: 49 NVERLDLNANNLTKITKADFAGLKNLRVLQLMENKISSIERGAFQDLQELERLRLNRNNL 108
Query: 347 TRLNETVF--HENYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQI 392
L E +F DL E ++ G P ST+ +++ QI
Sbjct: 109 QVLPELLFLGTTKLFRLDLSENQIQGIPRKAFRGSTEIKNLQLDYNQI 156
Score = 106 (42.4 bits), Expect = 8.1e-06, Sum P(2) = 8.1e-06
Identities = 39/141 (27%), Positives = 67/141 (47%)
Query: 136 NLGKLDT-LDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLD 194
NL + T + L Q+ I +P FA LR ++L+ N++ +L A+ Q L L+SL
Sbjct: 288 NLPETITEIRLEQNSIKIIPAGAFAPYKRLRRIDLSNNQITEL--ASDSFQGLRSLNSLV 345
Query: 195 LSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLP 254
L + L + F L+ L L+ N ++ + + + L L+ LSL + L +
Sbjct: 346 LYGNKIT-ELPKGLFDGLFSLQLLLLNANKINCLRVD-SFQDLQNLNLLSLYDNKLQTIA 403
Query: 255 ANTFHRFTCLQELDISHNPLI 275
TF +Q L ++ NP +
Sbjct: 404 KGTFSSLRAIQTLHLAQNPFM 424
Score = 101 (40.6 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 29/100 (29%), Positives = 48/100 (48%)
Query: 278 FTALLSPLESLEHL---DMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLT 334
FT + L + +HL D+ + + +S +F M+ L TLILS N+L + + F L
Sbjct: 749 FTQVPLELSNYKHLTLIDLSNNQISTLSNHSFSNMSELLTLILSYNRLRCIPAKAFDGLK 808
Query: 335 HLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLH 374
L +L L+ + + + F + L L L NPL+
Sbjct: 809 SLRLLSLHGNDIAVIPDGAFKD---LSSLSHLALGANPLY 845
Score = 90 (36.7 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
Identities = 37/180 (20%), Positives = 73/180 (40%)
Query: 369 SGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNET-VFHENYTYPDLEELRLSGN 427
SG L +PD QY T ++ N +F V L T +F + P L ++ LS N
Sbjct: 503 SGQKLTKIPDHIPQY---TAELRL-NNNEFTV----LEATGIFKK---LPQLRKINLSNN 551
Query: 428 PLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSF 487
+ + G +++ + ++ + +L L +N +S + SF
Sbjct: 552 KITDIEEGTFEGASGVNELILTSN--RLEGVHYSMLKGLGGLRTLMLRSNRISCVNNGSF 609
Query: 488 QFXXXXXXXXXXXXXXXXXTHISPTVLRHNRAITSIKLVGNPWKCDCNIADMWEWATREK 547
T +SP +++++ L+ NP+ C+C++A + EW +++
Sbjct: 610 ---TGLSSVRLLSLYDNLITSMSPGAFDTLHSLSTLNLLANPFNCNCHLAWLGEWLRKKR 666
Score = 59 (25.8 bits), Expect = 8.0e-08, Sum P(2) = 8.0e-08
Identities = 21/83 (25%), Positives = 33/83 (39%)
Query: 454 KIDYLPPNVFNNTRNITSLNLANNNLSMTSELSFQFXXXXXXXXXXXXXXXXXTHISPTV 513
KI LP +F+ ++ L L N ++ SFQ I+
Sbjct: 350 KITELPKGLFDGLFSLQLLLLNANKINCLRVDSFQDLQNLNLLSLYDNKLQT---IAKGT 406
Query: 514 LRHNRAITSIKLVGNPWKCDCNI 536
RAI ++ L NP+ CDC++
Sbjct: 407 FSSLRAIQTLHLAQNPFMCDCHL 429
Score = 50 (22.7 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 460 PNVFNNTRNITSLNLANNNLSMTSELSF 487
P +N +++T ++L+NN +S S SF
Sbjct: 753 PLELSNYKHLTLIDLSNNQISTLSNHSF 780
Score = 40 (19.1 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 21/89 (23%), Positives = 33/89 (37%)
Query: 362 DLEELRLSGNPLHVLPDSTKQYS-----------MRTIPTQIWKNF-DFLVILFILNETV 409
D+ EL L GN +P Y + T+ + N + L ++ N
Sbjct: 738 DVTELYLDGNEFTQVPLELSNYKHLTLIDLSNNQISTLSNHSFSNMSELLTLILSYNRLR 797
Query: 410 FHENYTYPDLEELRL---SGNPLHVLPTG 435
+ L+ LRL GN + V+P G
Sbjct: 798 CIPAKAFDGLKSLRLLSLHGNDIAVIPDG 826
>MGI|MGI:1315202 [details] [associations]
symbol:Slit3 "slit homolog 3 (Drosophila)" species:10090
"Mus musculus" [GO:0005102 "receptor binding" evidence=TAS]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005615 "extracellular
space" evidence=ISO;IDA] [GO:0005739 "mitochondrion" evidence=ISO]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IEA] [GO:0007411
"axon guidance" evidence=ISO;IDA] [GO:0008285 "negative regulation
of cell proliferation" evidence=IGI] [GO:0009887 "organ
morphogenesis" evidence=IGI;IMP] [GO:0010629 "negative regulation
of gene expression" evidence=IGI] [GO:0016020 "membrane"
evidence=ISO] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0035385 "Roundabout signaling pathway" evidence=ISO]
[GO:0048495 "Roundabout binding" evidence=ISO] [GO:0048846 "axon
extension involved in axon guidance" evidence=ISO] [GO:0050919
"negative chemotaxis" evidence=ISO] [GO:0070100 "negative
regulation of chemokine-mediated signaling pathway" evidence=ISO]
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
MGI:MGI:1315202 GO:GO:0005739 GO:GO:0007411 GO:GO:0008285
GO:GO:0005615 GO:GO:0007420 GO:GO:0030308 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005102 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0009887 PROSITE:PS01186 GO:GO:0032870
GO:GO:0010629 InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025
GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 GO:GO:0048846 GO:GO:0070100 Pfam:PF12661 Pfam:PF01463
GO:GO:0051414 GeneTree:ENSGT00700000104083 GO:GO:0050919
GO:GO:0035385 GO:GO:0061364 HOGENOM:HOG000116120 HOVERGEN:HBG057959
OrthoDB:EOG4D7Z4T CTD:6586 KO:K06850 ChiTaRS:SLIT3 EMBL:AF144629
EMBL:AL669839 EMBL:AL669856 EMBL:AL731688 EMBL:AL732401
EMBL:AL732630 IPI:IPI00664551 RefSeq:NP_035542.2 UniGene:Mm.478604
ProteinModelPortal:Q9WVB4 SMR:Q9WVB4 STRING:Q9WVB4
PhosphoSite:Q9WVB4 PRIDE:Q9WVB4 Ensembl:ENSMUST00000069837
GeneID:20564 KEGG:mmu:20564 InParanoid:B1ATW4 OMA:SVDCHGL
NextBio:298861 Bgee:Q9WVB4 CleanEx:MM_SLIT3 Genevestigator:Q9WVB4
GermOnline:ENSMUSG00000056427 Uniprot:Q9WVB4
Length = 1523
Score = 204 (76.9 bits), Expect = 6.0e-13, Sum P(2) = 6.0e-13
Identities = 94/366 (25%), Positives = 159/366 (43%)
Query: 19 LITINLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLR 77
L ++L N + +E GAF + L L + + L + F + L +LDLS N ++
Sbjct: 87 LRVLHLEDNQVSIIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDLSENQIQ 146
Query: 78 IIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNL 137
I F +T ++ L L+ +++ I AF L L+ L L+ N + S I T ++
Sbjct: 147 GIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNI-SRILVTS-FNHM 204
Query: 138 GKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSN 197
K+ TL L + + D A WL + L + I TL VHL +++
Sbjct: 205 PKIRTLRLHSNHL--YCDCHLA---WLSDW-LRQRRTIG---QFTLCMAPVHLRGFSVAD 255
Query: 198 CHLK-----GPLSEDAFVNATKLR---TLYLSGNPLSAADLSVALKPLTK---LHRLSLR 246
K GP SE NA L S N + + P + + L
Sbjct: 256 VQKKEYVCPGPHSEAPACNANSLSCPSACSCSNNIVDCRGKGLTEIPANLPEGIVEIRLE 315
Query: 247 NCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTF 306
+ +PA F ++ L+ +DIS N + D L+SL L + + + I + F
Sbjct: 316 QNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIPKGLF 375
Query: 307 LKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEEL 366
+ SL+ L+L+ NK+ L FQ+L +L++L L + L +++ +F ++ L
Sbjct: 376 DGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLF---VPLQSIQTL 432
Query: 367 RLSGNP 372
L+ NP
Sbjct: 433 HLAQNP 438
Score = 193 (73.0 bits), Expect = 3.9e-11, P = 3.9e-11
Identities = 85/319 (26%), Positives = 130/319 (40%)
Query: 60 FTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLEL 119
F L L K++LS N ++ + G FD ++ LML L + F L+ LKTL L
Sbjct: 553 FKKLPNLRKINLSNNRIKEVREGAFDGAAGVQELMLTGNQLETMHGRMFRGLSSLKTLML 612
Query: 120 SQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENEL-IDLD 178
N + + T L + L L + I+ + F L +NL N +
Sbjct: 613 RSNLISCVSNDTFA--GLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNCH 670
Query: 179 VATTLGQNLVHLDSLDLSNCHLKGPLS-EDAFVNATKLRTLYLSGNPLSAADLSVALKPL 237
+A LG+ L + N + P ++ + ++ GN S+ LS
Sbjct: 671 MAW-LGRWL-RKRRIVSGNPRCQKPFFLKEIPIQDVAIQDFTCDGNEESSCQLSPRCPEQ 728
Query: 238 TKLHRLSLR--NCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGY 295
+R N GL LP T EL + N L A LS L +D+
Sbjct: 729 CTCVETVVRCSNRGLHALPKGMPKDVT---ELYLEGNHLT-AVPKELSAFRQLTLIDLSN 784
Query: 296 SNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFH 355
+++ ++ TF M+ L TLILS N+L + F L L VL L+ ++ + E F+
Sbjct: 785 NSISMLTNHTFSNMSHLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFN 844
Query: 356 ENYTYPDLEELRLSGNPLH 374
+ L L L NPLH
Sbjct: 845 D---LTSLSHLALGTNPLH 860
Score = 169 (64.5 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 78/337 (23%), Positives = 147/337 (43%)
Query: 42 LLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLT 101
++ + +++ ++ I FT L ++D+S N + I P F L SL L+L +T
Sbjct: 309 IVEIRLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKIT 368
Query: 102 YISPSAFDNLNHLKTLELSQNKLKS-HIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFAN 160
I FD L L+ L L+ NK+ ++ L NL L D + IS +F
Sbjct: 369 EIPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISK---GLFVP 425
Query: 161 NTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLS-EDAFVNATKLRTLY 219
++ L+LA+N + D + + + ++ S P + ++ K +
Sbjct: 426 LQSIQTLHLAQNPFV-CDCHLKWLADYLQDNPIETSGARCSSPRRLANKRISQIKSKKFR 484
Query: 220 LSG-----NPLSAA---DLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISH 271
SG N S+ DL K + + N L+R+P++ +T L+ +
Sbjct: 485 CSGSEDYRNRFSSECFMDLVCPEKCRCEGTIVDCSNQKLARIPSH-LPEYTTDLRLNDND 543
Query: 272 NPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQ 331
+++A T + L +L +++ + ++ + F ++ L+L+GN+LET+ +F+
Sbjct: 544 ISVLEA-TGIFKKLPNLRKINLSNNRIKEVREGAFDGAAGVQELMLTGNQLETMHGRMFR 602
Query: 332 NLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRL 368
L+ L L L + L V N T+ L +RL
Sbjct: 603 GLSSLKTLMLRS----NLISCV--SNDTFAGLSSVRL 633
Score = 152 (58.6 bits), Expect = 2.0e-14, Sum P(2) = 2.0e-14
Identities = 44/132 (33%), Positives = 68/132 (51%)
Query: 18 GLITINLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPL 76
G++ I L N I+ + GAF + L + + + +S I P F L +L L L GN +
Sbjct: 308 GIVEIRLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKI 367
Query: 77 RIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGN 136
I G+FD L SL+ L+LN + + + F +L +L L L NKL++ I L +
Sbjct: 368 TEIPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQT-ISKGLFVP- 425
Query: 137 LGKLDTLDLRQS 148
L + TL L Q+
Sbjct: 426 LQSIQTLHLAQN 437
Score = 151 (58.2 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 89/357 (24%), Positives = 148/357 (41%)
Query: 38 VARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNR 97
+ R+ L + +++I F L L L L N + IIE G F L LE L LN+
Sbjct: 59 IPRNAERLDLDRNNITRITKMDFAGLKNLRVLHLEDNQVSIIERGAFQDLKQLERLRLNK 118
Query: 98 CNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNV 157
L + F + L L+LS+N+++ I G G + L L + IS + D
Sbjct: 119 NKLQVLPELLFQSTPKLTRLDLSENQIQG-IPRKAFRGVTG-VKNLQLDNNHISCIEDGA 176
Query: 158 FANNTWLRNLNLAENELIDLDVATTLGQ----NLVHLDSLDL-SNCHLKGPLSEDAFVNA 212
F L L L N + + + T+ + L S L +CHL LS D
Sbjct: 177 FRALRDLEILTLNNNNISRI-LVTSFNHMPKIRTLRLHSNHLYCDCHLAW-LS-DWLRQR 233
Query: 213 TKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNC-GL-SRLPANTFHRFTCLQELDIS 270
+ L P+ SVA + K + C G S PA + +C S
Sbjct: 234 RTIGQFTLCMAPVHLRGFSVA--DVQKKEYV----CPGPHSEAPACNANSLSCPSACSCS 287
Query: 271 HNPLIDA----FTALLSPL-ESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETL 325
+N ++D T + + L E + + + ++++ I F + LK + +S N++ +
Sbjct: 288 NN-IVDCRGKGLTEIPANLPEGIVEIRLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDI 346
Query: 326 ESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQ 382
FQ L L+ L L +T + + +F + L+ L L+ N ++ L +T Q
Sbjct: 347 APDAFQGLKSLTSLVLYGNKITEIPKGLFDGLVS---LQLLLLNANKINCLRVNTFQ 400
Score = 147 (56.8 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 89/347 (25%), Positives = 156/347 (44%)
Query: 49 ECTLSKIN--PQFFTNLTTLNKLDLSGNPLRIIEP-GVFDPLTSLEYLMLNRCNLTYISP 105
+C+ K+ P TT L L+ N + ++E G+F L +L + L+ + +
Sbjct: 517 DCSNQKLARIPSHLPEYTT--DLRLNDNDISVLEATGIFKKLPNLRKINLSNNRIKEVRE 574
Query: 106 SAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLR 165
AFD ++ L L+ N+L++ + + G L L TL LR + IS + ++ FA + +R
Sbjct: 575 GAFDGAAGVQELMLTGNQLET-MHGRMFRG-LSSLKTLMLRSNLISCVSNDTFAGLSSVR 632
Query: 166 NLNLAENELIDLDVA--TTL-GQNLVHLDSLDLS-NCHLK--GP-LSEDAFV--NATKLR 216
L+L +N + + TTL + ++L S + NCH+ G L + V N +
Sbjct: 633 LLSLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNCHMAWLGRWLRKRRIVSGNPRCQK 692
Query: 217 TLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLS-RLPANTFHRFTCLQELDISHNPLI 275
+L P+ VA++ T +C LS R P + TC++ + N +
Sbjct: 693 PFFLKEIPIQ----DVAIQDFT-CDGNEESSCQLSPRCP----EQCTCVETVVRCSNRGL 743
Query: 276 DAFTALLSPLESLEHLDMGYSNLQRISR--STFLKMTSLKTLILSGNKLETLESGLFQNL 333
A + P + E L + ++L + + S F ++T + LS N + L + F N+
Sbjct: 744 HALPKGM-PKDVTE-LYLEGNHLTAVPKELSAFRQLTLID---LSNNSISMLTNHTFSNM 798
Query: 334 THLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDST 380
+HLS L L+ RL H L L L GN + +P+ +
Sbjct: 799 SHLSTLILS---YNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGS 842
Score = 126 (49.4 bits), Expect = 2.0e-14, Sum P(2) = 2.0e-14
Identities = 63/271 (23%), Positives = 110/271 (40%)
Query: 218 LYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDA 277
L L+ N +S + + K L L +++L N + + F +QEL ++ N L
Sbjct: 537 LRLNDNDISVLEATGIFKKLPNLRKINLSNNRIKEVREGAFDGAAGVQELMLTGNQLETM 596
Query: 278 FTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLS 337
+ L SL+ L + + + +S TF ++S++ L L N++ T+ G F L LS
Sbjct: 597 HGRMFRGLSSLKTLMLRSNLISCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLS 656
Query: 338 VLELNNCGLTRLNETVFHENYTYPDLEELRL-SGNPLHVLPDSTKQYSMRTIPTQIWKNF 396
+ L L+ H + L + R+ SGNP P K+ ++ + Q +
Sbjct: 657 TINL----LSNPFNCNCHMAWLGRWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQDFTCD 712
Query: 397 DFLVILFILNETVFHENYTYPDLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKID 456
L+ E T + +R S LH LP G
Sbjct: 713 GNEESSCQLSPRC-PEQCTCVETV-VRCSNRGLHALPKGMPKDVTELYLEGNHLTAV--- 767
Query: 457 YLPPNVFNNTRNITSLNLANNNLSMTSELSF 487
P + R +T ++L+NN++SM + +F
Sbjct: 768 ---PKELSAFRQLTLIDLSNNSISMLTNHTF 795
Score = 121 (47.7 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 38/117 (32%), Positives = 55/117 (47%)
Query: 17 PGLITINLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNP 75
P L INL+ N I+ V EGAF A + L + L ++ + F L++L L L N
Sbjct: 557 PNLRKINLSNNRIKEVREGAFDGAAGVQELMLTGNQLETMHGRMFRGLSSLKTLMLRSNL 616
Query: 76 LRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKS--HIDW 130
+ + F L+S+ L L +T I+P AF L L T+ L N H+ W
Sbjct: 617 ISCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNCHMAW 673
Score = 80 (33.2 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 48/157 (30%), Positives = 67/157 (42%)
Query: 139 KLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNC 198
+L +DL + IS L ++ F+N + L L L+ N L + V G L L L L
Sbjct: 776 QLTLIDLSNNSISMLTNHTFSNMSHLSTLILSYNRLRCIPVHAFNG--LRSLRVLTLHGN 833
Query: 199 HLKGPLSEDAFVNATKLRTLYLSGNPL----SAADLSVALKPLTK---LHRLSLRNCGLS 251
+ + E +F + T L L L NPL S LS +K K + R S
Sbjct: 834 DISS-VPEGSFNDLTSLSHLALGTNPLHCDCSLRWLSEWVKAGYKEPGIARCSSPESMAD 892
Query: 252 RLPANT-FHRFTCLQELDISHNPLIDAFTALLSPLES 287
RL T HRF C +DI N + L SP ++
Sbjct: 893 RLLLTTPTHRFQCKGPVDI--NIVAKCNACLSSPCKN 927
Score = 58 (25.5 bits), Expect = 6.0e-13, Sum P(2) = 6.0e-13
Identities = 27/125 (21%), Positives = 44/125 (35%)
Query: 418 DLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANN 477
D+ EL L GN L +P I L + F+N ++++L L+ N
Sbjct: 753 DVTELYLEGNHLTAVPK---ELSAFRQLTLIDLSNNSISMLTNHTFSNMSHLSTLILSYN 809
Query: 478 NLSMTSELSFQFXXXXXXXXXXXXXXXXXTHISPTVLRHNRAITSIKLVGNPWKCDCNIA 537
L +F S L +++ + L NP CDC++
Sbjct: 810 RLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLT---SLSHLALGTNPLHCDCSLR 866
Query: 538 DMWEW 542
+ EW
Sbjct: 867 WLSEW 871
Score = 53 (23.7 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 17/72 (23%), Positives = 29/72 (40%)
Query: 416 YPDLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLA 475
+ L + LS N + +L N ++ +P + FN R++ L L
Sbjct: 774 FRQLTLIDLSNNSISMLT--NHTFSNMSHLSTLILSYNRLRCIPVHAFNGLRSLRVLTLH 831
Query: 476 NNNLSMTSELSF 487
N++S E SF
Sbjct: 832 GNDISSVPEGSF 843
>UNIPROTKB|O75325 [details] [associations]
symbol:LRRN2 "Leucine-rich repeat neuronal protein 2"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0004872 "receptor activity" evidence=TAS]
[GO:0007155 "cell adhesion" evidence=TAS] [GO:0007165 "signal
transduction" evidence=TAS] InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021 GO:GO:0007165
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007155 EMBL:CH471067
GO:GO:0004872 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 MEROPS:I43.001 HOGENOM:HOG000252914
HOVERGEN:HBG052361 EMBL:AF030435 EMBL:AY358290 EMBL:AK312408
EMBL:AL512306 EMBL:BC034047 EMBL:BC068541 IPI:IPI00025256
RefSeq:NP_006329.2 RefSeq:NP_963924.1 UniGene:Hs.26312
ProteinModelPortal:O75325 SMR:O75325 IntAct:O75325 STRING:O75325
PhosphoSite:O75325 PRIDE:O75325 DNASU:10446 Ensembl:ENST00000367175
Ensembl:ENST00000367176 Ensembl:ENST00000367177 GeneID:10446
KEGG:hsa:10446 UCSC:uc001hbe.1 CTD:10446 GeneCards:GC01M204586
H-InvDB:HIX0001502 HGNC:HGNC:16914 HPA:HPA029124 MIM:605492
neXtProt:NX_O75325 PharmGKB:PA162394661 InParanoid:O75325
OMA:LHQQTVE OrthoDB:EOG4JWVCZ PhylomeDB:O75325 GenomeRNAi:10446
NextBio:39593 ArrayExpress:O75325 Bgee:O75325 CleanEx:HS_LRRN2
Genevestigator:O75325 GermOnline:ENSG00000170382 Uniprot:O75325
Length = 713
Score = 219 (82.2 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 76/271 (28%), Positives = 128/271 (47%)
Query: 8 YNDRRNLDN---PGLITINLNANPIQPVEG-AFLVARSLLYLYMQECTLSKINPQFFTNL 63
++D R+ D P L++++L N + +E +F SL LY+ L +I P+ F+ L
Sbjct: 105 FSDARDCDFHALPQLLSLHLEENQLTRLEDHSFAGLASLQELYLNHNQLYRIAPRAFSGL 164
Query: 64 TTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNK 123
+ L +L L+ N LR I+ F+ L +LE LM+ + I F L +L++L L+
Sbjct: 165 SNLLRLHLNSNLLRAIDSRWFEMLPNLEILMIGGNKVDAILDMNFRPLANLRSLVLAGMN 224
Query: 124 LKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTL 183
L+ D+ L L L++L + ++ +P L+ L+L +N L +
Sbjct: 225 LREISDYALE--GLQSLESLSFYDNQLARVPRRALEQVPGLKFLDLNKNPLQRVGPGDFA 282
Query: 184 GQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRL 243
N++HL L L+N + + A VN +L L ++ NP + A L ++ L
Sbjct: 283 --NMLHLKELGLNNMEELVSIDKFALVNLPELTKLDITNNPRLSFIHPRAFHHLPQMETL 340
Query: 244 SLRNCGLSRLPANTFHRFTCLQELDISHNPL 274
L N LS L T LQE+ + NP+
Sbjct: 341 MLNNNALSALHQQTVESLPNLQEVGLHGNPI 371
Score = 130 (50.8 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 44/131 (33%), Positives = 62/131 (47%)
Query: 11 RRNLDN-PGLITINLNANPIQPV-EGAFLVARSLLYLYMQECT-LSKINPQFFTNLTTLN 67
RR L+ PGL ++LN NP+Q V G F L L + L I+ NL L
Sbjct: 254 RRALEQVPGLKFLDLNKNPLQRVGPGDFANMLHLKELGLNNMEELVSIDKFALVNLPELT 313
Query: 68 KLDLSGNP-LRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKS 126
KLD++ NP L I P F L +E LMLN L+ + ++L +L+ + L N ++
Sbjct: 314 KLDITNNPRLSFIHPRAFHHLPQMETLMLNNNALSALHQQTVESLPNLQEVGLHGNPIRC 373
Query: 127 H--IDWTLVLG 135
I W G
Sbjct: 374 DCVIRWANATG 384
Score = 128 (50.1 bits), Expect = 0.00016, P = 0.00016
Identities = 77/302 (25%), Positives = 126/302 (41%)
Query: 45 LYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYIS 104
L +Q ++ +++ L L +LDLS N F L L L L LT +
Sbjct: 74 LLLQSNSIVRVDQSELGYLANLTELDLSQNSFSDARDCDFHALPQLLSLHLEENQLTRLE 133
Query: 105 PSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWL 164
+F L L+ L L+ N+L L L L L + + + F L
Sbjct: 134 DHSFAGLASLQELYLNHNQLYRIAP--RAFSGLSNLLRLHLNSNLLRAIDSRWFEMLPNL 191
Query: 165 RNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNP 224
L + N+ +D + + L +L SL L+ +L+ +S+ A L +L N
Sbjct: 192 EILMIGGNK-VDAILDMNF-RPLANLRSLVLAGMNLR-EISDYALEGLQSLESLSFYDNQ 248
Query: 225 LSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISH-NPL--IDAFTAL 281
L+ AL+ + L L L L R+ F L+EL +++ L ID F AL
Sbjct: 249 LARVPRR-ALEQVPGLKFLDLNKNPLQRVGPGDFANMLHLKELGLNNMEELVSIDKF-AL 306
Query: 282 LSPLESLEHLDMGYS-NLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLE 340
++ L L LD+ + L I F + ++TL+L+ N L L ++L +L +
Sbjct: 307 VN-LPELTKLDITNNPRLSFIHPRAFHHLPQMETLMLNNNALSALHQQTVESLPNLQEVG 365
Query: 341 LN 342
L+
Sbjct: 366 LH 367
Score = 126 (49.4 bits), Expect = 0.00026, P = 0.00026
Identities = 67/250 (26%), Positives = 108/250 (43%)
Query: 196 SNCHLKGPLSEDAFVNATKLRTLYLSGNPLS-AADLSV-ALKPLTKLHRLSLRNCGLSRL 253
SN ++ SE ++ L L LS N S A D AL L LH L L+RL
Sbjct: 78 SNSIVRVDQSELGYL--ANLTELDLSQNSFSDARDCDFHALPQLLSLH---LEENQLTRL 132
Query: 254 PANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLK 313
++F LQEL ++HN L S L +L L + + L+ I F + +L+
Sbjct: 133 EDHSFAGLASLQELYLNHNQLYRIAPRAFSGLSNLLRLHLNSNLLRAIDSRWFEMLPNLE 192
Query: 314 TLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFH-----ENYTYPDLEELRL 368
L++ GNK++ + F+ L +L L L L +++ E+ ++ D + R+
Sbjct: 193 ILMIGGNKVDAILDMNFRPLANLRSLVLAGMNLREISDYALEGLQSLESLSFYDNQLARV 252
Query: 369 SGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFI----LN---ETVFHENYTY---PD 418
L +P K + P Q DF +L + LN E V + + P+
Sbjct: 253 PRRALEQVP-GLKFLDLNKNPLQRVGPGDFANMLHLKELGLNNMEELVSIDKFALVNLPE 311
Query: 419 LEELRLSGNP 428
L +L ++ NP
Sbjct: 312 LTKLDITNNP 321
>ZFIN|ZDB-GENE-040426-1130 [details] [associations]
symbol:chad "chondroadherin" species:7955 "Danio
rerio" [GO:0008150 "biological_process" evidence=ND] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 ZFIN:ZDB-GENE-040426-1130
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
HSSP:Q9BZR6 CTD:1101 HOGENOM:HOG000013150 HOVERGEN:HBG005324
KO:K06248 OrthoDB:EOG4K9BCM InterPro:IPR026906 Pfam:PF13306
EMBL:BC054898 EMBL:CU468779 IPI:IPI00486284 RefSeq:NP_957357.1
UniGene:Dr.80402 IntAct:Q7SYE5 STRING:Q7SYE5 GeneID:394038
KEGG:dre:394038 InParanoid:Q7SYE5 NextBio:20815000 Uniprot:Q7SYE5
Length = 363
Score = 212 (79.7 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 69/227 (30%), Positives = 111/227 (48%)
Query: 18 GLITINLNANPIQPVEG-AFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPL 76
GLI+++L I+ + G AF L+YLY+ + +S I P F +LT L L L GN +
Sbjct: 80 GLISLHLQHCQIRELSGQAFKGLNKLIYLYLSDNEISTIKPGAFEDLTELTYLYLDGNQI 139
Query: 77 RIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTL-VLG 135
+ G+F P+ +L L LN L + P F L+ L +S N+L S +L +
Sbjct: 140 TSLPKGIFSPMINLFILQLNNNKLRELQPGTFKGAKDLRWLYMSGNELSSIQPGSLDEVE 199
Query: 136 NLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAEN--ELIDLDVATTLGQNLVHLDSL 193
NL L TLD Q+ +S P + + LNL++N LI + G+ +++ L
Sbjct: 200 NLAIL-TLD--QNNLSTYPLLAMSKLRVVEELNLSKNPLSLIPDHAFRSFGR---YMEKL 253
Query: 194 DLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKL 240
L++ L+ S AF T L++L+L N L + S+ + +
Sbjct: 254 HLNDMSLE-KFSNAAFEGVTALKSLHLENNKLRSLPNSLEFSTIQNI 299
Score = 180 (68.4 bits), Expect = 9.3e-11, P = 9.3e-11
Identities = 76/260 (29%), Positives = 120/260 (46%)
Query: 22 INLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIE 80
+NL N + + G F + L+ L++Q C + +++ Q F L L L LS N + I+
Sbjct: 60 LNLQRNNLGNLPTGGFSEMKGLISLHLQHCQIRELSGQAFKGLNKLIYLYLSDNEISTIK 119
Query: 81 PGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKL 140
PG F+ LT L YL L+ +T + F + +L L+L+ NKL+ T G
Sbjct: 120 PGAFEDLTELTYLYLDGNQITSLPKGIFSPMINLFILQLNNNKLRELQPGTFK----GAK 175
Query: 141 DTLDLRQSG--ISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNC 198
D L SG +S++ L L L +N L + +V + L+LS
Sbjct: 176 DLRWLYMSGNELSSIQPGSLDEVENLAILTLDQNNLSTYPLLAMSKLRVV--EELNLS-- 231
Query: 199 HLKGPLS---EDAFVNATK-LRTLYLSGNPLSAADLS-VALKPLTKLHRLSLRNCGLSRL 253
K PLS + AF + + + L+L N +S S A + +T L L L N L L
Sbjct: 232 --KNPLSLIPDHAFRSFGRYMEKLHL--NDMSLEKFSNAAFEGVTALKSLHLENNKLRSL 287
Query: 254 PANTFHRFTCLQELDISHNP 273
P N+ F+ +Q + + +NP
Sbjct: 288 P-NSLE-FSTIQNITLFNNP 305
Score = 161 (61.7 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 67/263 (25%), Positives = 104/263 (39%)
Query: 231 SVALKPLTKLHR----LSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLE 286
+V LK + ++ L+L+ L LP F L L + H + + L
Sbjct: 44 NVGLKKIPRISEATRLLNLQRNNLGNLPTGGFSEMKGLISLHLQHCQIRELSGQAFKGLN 103
Query: 287 SLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGL 346
L +L + + + I F +T L L L GN++ +L G+F + +L +L+LNN L
Sbjct: 104 KLIYLYLSDNEISTIKPGAFEDLTELTYLYLDGNQITSLPKGIFSPMINLFILQLNNNKL 163
Query: 347 TRLNETVFHENYTYPDLEELRLSGNPLH-VLPDSTKQYSMRTIPTQIWKNFDFLVILFIL 405
L F DL L +SGN L + P S + I T N +L +
Sbjct: 164 RELQPGTFKGA---KDLRWLYMSGNELSSIQPGSLDEVENLAILTLDQNNLSTYPLLAMS 220
Query: 406 NETVFHENYTYPDLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNN 465
V +EEL LS NPL ++P + ++ F
Sbjct: 221 KLRV---------VEELNLSKNPLSLIPD-HAFRSFGRYMEKLHLNDMSLEKFSNAAFEG 270
Query: 466 TRNITSLNLANNNL-SMTSELSF 487
+ SL+L NN L S+ + L F
Sbjct: 271 VTALKSLHLENNKLRSLPNSLEF 293
Score = 126 (49.4 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 63/242 (26%), Positives = 101/242 (41%)
Query: 38 VARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNR 97
++ + L +Q L + F+ + L L L +R + F L L YL L+
Sbjct: 53 ISEATRLLNLQRNNLGNLPTGGFSEMKGLISLHLQHCQIRELSGQAFKGLNKLIYLYLSD 112
Query: 98 CNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNV 157
++ I P AF++L L L L N++ S + + L L L + + L
Sbjct: 113 NEISTIKPGAFEDLTELTYLYLDGNQITSLPKG--IFSPMINLFILQLNNNKLRELQPGT 170
Query: 158 FANNTWLRNLNLAENELIDLDVATTLG-QNLVHLDSLDLSNCHLKGPLSEDAFVNATKLR 216
F LR L ++ NEL + + +NL L +LD +N LS + +KLR
Sbjct: 171 FKGAKDLRWLYMSGNELSSIQPGSLDEVENLAIL-TLDQNN------LSTYPLLAMSKLR 223
Query: 217 T---LYLSGNPLSAADLSVALKPLTK-LHRLSLRNCGLSRLPANTFHRFTCLQELDISHN 272
L LS NPLS A + + + +L L + L + F T L+ L + +N
Sbjct: 224 VVEELNLSKNPLSLIP-DHAFRSFGRYMEKLHLNDMSLEKFSNAAFEGVTALKSLHLENN 282
Query: 273 PL 274
L
Sbjct: 283 KL 284
>UNIPROTKB|F1Q3G2 [details] [associations]
symbol:SLIT3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IEA] [GO:0061364
"apoptotic process involved in luteolysis" evidence=IEA]
[GO:0051414 "response to cortisol stimulus" evidence=IEA]
[GO:0050919 "negative chemotaxis" evidence=IEA] [GO:0048846 "axon
extension involved in axon guidance" evidence=IEA] [GO:0048495
"Roundabout binding" evidence=IEA] [GO:0035385 "Roundabout
signaling pathway" evidence=IEA] [GO:0032870 "cellular response to
hormone stimulus" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0010629 "negative regulation of gene
expression" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0005615 "extracellular space"
evidence=IEA] [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0008285 GO:GO:0005615 GO:GO:0030308 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887
PROSITE:PS01186 GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791
SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
GO:GO:0070100 Pfam:PF12661 Pfam:PF01463 GO:GO:0051414
GeneTree:ENSGT00700000104083 GO:GO:0050919 GO:GO:0035385
GO:GO:0061364 OMA:SVDCHGL EMBL:AAEX03003028 EMBL:AAEX03003027
Ensembl:ENSCAFT00000026988 Uniprot:F1Q3G2
Length = 1319
Score = 193 (73.0 bits), Expect = 4.3e-11, Sum P(2) = 4.3e-11
Identities = 87/319 (27%), Positives = 132/319 (41%)
Query: 60 FTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLEL 119
F L L K++LS N ++ + G FD S++ LML L + F L+ LKTL L
Sbjct: 350 FKKLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRMFRGLSSLKTLML 409
Query: 120 SQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENEL-IDLD 178
N + + T L + L L + I+ + F L +NL N +
Sbjct: 410 RSNLITCVSNDTFA--GLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNCH 467
Query: 179 VATTLGQNLVHLDSLDLSNCHLKGPLS-EDAFVNATKLRTLYLSGNPLSAADLSVAL-KP 236
+A LG+ L + N + P ++ + ++ GN S+ L +
Sbjct: 468 LAW-LGKWL-RKRRIVSGNPRCQKPFFLKEIPIQDVAIQDFTCEGNDESSCQLGPRCPEQ 525
Query: 237 LTKLHRL-SLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGY 295
T L + N GL LP T EL + N L A LS L L +D+
Sbjct: 526 CTCLETVVRCSNRGLHTLPKGIPKDVT---ELYLEGNHLT-AVPRELSALRHLTLIDLSN 581
Query: 296 SNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFH 355
+++ ++ TF M+ L TLILS N+L + F L L VL L+ ++ + E F
Sbjct: 582 NSIGVLTNYTFSNMSHLSTLILSYNRLRCIPIHAFDGLRSLRVLTLHGNDISSVPEGSFS 641
Query: 356 ENYTYPDLEELRLSGNPLH 374
+ L L L NPLH
Sbjct: 642 D---LTSLSHLALGTNPLH 657
Score = 175 (66.7 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 74/323 (22%), Positives = 146/323 (45%)
Query: 42 LLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLT 101
++ + +++ ++ I FT L ++D+S N + I P F L SL L+L +T
Sbjct: 106 IVEIRLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKIT 165
Query: 102 YISPSAFDNLNHLKTLELSQNKLKS-HIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFAN 160
++ FD L L+ L L+ NK+ ++ L NL L D + IS +FA
Sbjct: 166 ELAKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISK---GLFAP 222
Query: 161 NTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLS-EDAFVNATKLRTLY 219
++ L+LA+N + D + + + ++ S P + + K +
Sbjct: 223 LQAIQTLHLAQNPFV-CDCHLKWLADYLQDNPIETSGARCSSPRRLANKRIGQIKSKKFR 281
Query: 220 LSGNP-----LSAA---DLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISH 271
SG+ S+ DL K + + N L+R+P++ T L+ L+ +
Sbjct: 282 CSGSEDYRSRFSSECFMDLVCPEKCRCEGTIVDCSNQKLARIPSHLPEYVTDLR-LNDNE 340
Query: 272 NPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQ 331
+++A T + L +L +++ + ++ + F S++ L+L+GN+LET+ +F+
Sbjct: 341 ISVLEA-TGIFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRMFR 399
Query: 332 NLTHLSVLELNNCGLTRLNETVF 354
L+ L L L + +T ++ F
Sbjct: 400 GLSSLKTLMLRSNLITCVSNDTF 422
Score = 149 (57.5 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 43/132 (32%), Positives = 67/132 (50%)
Query: 18 GLITINLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPL 76
G++ I L N I+ + GAF + L + + + +S I P F L +L L L GN +
Sbjct: 105 GIVEIRLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKI 164
Query: 77 RIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGN 136
+ G+FD L SL+ L+LN + + + F +L +L L L NKL++ I L
Sbjct: 165 TELAKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQT-ISKGL-FAP 222
Query: 137 LGKLDTLDLRQS 148
L + TL L Q+
Sbjct: 223 LQAIQTLHLAQN 234
Score = 140 (54.3 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 85/324 (26%), Positives = 144/324 (44%)
Query: 69 LDLSGNPLRIIEP-GVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSH 127
L L+ N + ++E G+F L +L + L+ + + AFD ++ L L+ N+L++
Sbjct: 334 LRLNDNEISVLEATGIFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLET- 392
Query: 128 IDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVA--TTL-G 184
+ + G L L TL LR + I+ + ++ FA + +R L+L +N + + TTL
Sbjct: 393 VHGRMFRG-LSSLKTLMLRSNLITCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVS 451
Query: 185 QNLVHLDSLDLS-NCHLK--GP-LSEDAFV--NATKLRTLYLSGNPLSAADLSVALKPLT 238
+ ++L S + NCHL G L + V N + +L P+ VA++ T
Sbjct: 452 LSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPFFLKEIPIQ----DVAIQDFT 507
Query: 239 KLHRLSLRNCGLS-RLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSN 297
+C L R P + TCL+ + N + + P + E L + ++
Sbjct: 508 -CEGNDESSCQLGPRCP----EQCTCLETVVRCSNRGLHTLPKGI-PKDVTE-LYLEGNH 560
Query: 298 LQRISRSTFLKMTSLKTLI-LSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHE 356
L + R L TLI LS N + L + F N++HLS L L+ RL H
Sbjct: 561 LTAVPRE--LSALRHLTLIDLSNNSIGVLTNYTFSNMSHLSTLILS---YNRLRCIPIHA 615
Query: 357 NYTYPDLEELRLSGNPLHVLPDST 380
L L L GN + +P+ +
Sbjct: 616 FDGLRSLRVLTLHGNDISSVPEGS 639
Score = 129 (50.5 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 39/117 (33%), Positives = 56/117 (47%)
Query: 17 PGLITINLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNP 75
P L INL+ N I+ V EGAF A S+ L + L ++ + F L++L L L N
Sbjct: 354 PNLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRMFRGLSSLKTLMLRSNL 413
Query: 76 LRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKS--HIDW 130
+ + F L+S+ L L +T I+P AF L L T+ L N H+ W
Sbjct: 414 ITCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNCHLAW 470
Score = 129 (50.5 bits), Expect = 0.00026, P = 0.00026
Identities = 49/202 (24%), Positives = 89/202 (44%)
Query: 182 TLGQNLVHLDSLDLSNCHLK-----GPLSEDAFVNATKLR---TLYLSGNPLSAADLSVA 233
TL VHL ++++ K GP SE NA + S N + +
Sbjct: 37 TLCMAPVHLRGFNVADVQKKEYVCPGPHSEPPSCNANSISCPSACTCSNNIVDCRGKGLT 96
Query: 234 LKPLTK---LHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEH 290
P + + L + +PA F ++ L+ +DIS N + D L+SL
Sbjct: 97 EIPANLPEGIVEIRLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTS 156
Query: 291 LDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLN 350
L + + + +++ F + SL+ L+L+ NK+ L FQ+L +L++L L + L ++
Sbjct: 157 LVLYGNKITELAKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTIS 216
Query: 351 ETVFHENYTYPDLEELRLSGNP 372
+ +F ++ L L+ NP
Sbjct: 217 KGLFAPLQA---IQTLHLAQNP 235
Score = 127 (49.8 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 79/345 (22%), Positives = 133/345 (38%)
Query: 218 LYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDA 277
L L+ N +S + + K L L +++L N + + F +QEL ++ N L
Sbjct: 334 LRLNDNEISVLEATGIFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETV 393
Query: 278 FTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLS 337
+ L SL+ L + + + +S TF ++S++ L L N++ T+ G F L LS
Sbjct: 394 HGRMFRGLSSLKTLMLRSNLITCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLS 453
Query: 338 VLELNNCGLTRLNETVFHENYTYPDLEELRL-SGNPLHVLPDSTKQYSMRTIPTQIWK-- 394
+ L L+ H + L + R+ SGNP P K+ ++ + Q +
Sbjct: 454 TINL----LSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQDFTCE 509
Query: 395 -NFDFLVIL-------FILNETVFH-EN---YTYP-----DLEELRLSGNPLHVLPTGNX 437
N + L ETV N +T P D+ EL L GN L +P
Sbjct: 510 GNDESSCQLGPRCPEQCTCLETVVRCSNRGLHTLPKGIPKDVTELYLEGNHLTAVPR--- 566
Query: 438 XXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSFQFXXXXXXXX 497
I L F+N ++++L L+ N L +F
Sbjct: 567 ELSALRHLTLIDLSNNSIGVLTNYTFSNMSHLSTLILSYNRLRCIPIHAFDGLRSLRVLT 626
Query: 498 XXXXXXXXXTHISPTVLRHNRAITSIKLVGNPWKCDCNIADMWEW 542
S + L +++ + L NP CDC++ + EW
Sbjct: 627 LHGNDISSVPEGSFSDLT---SLSHLALGTNPLHCDCSLRWLSEW 668
Score = 71 (30.1 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 45/165 (27%), Positives = 68/165 (41%)
Query: 134 LGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSL 193
L L L +DL + I L + F+N + L L L+ N L + + G L L L
Sbjct: 568 LSALRHLTLIDLSNNSIGVLTNYTFSNMSHLSTLILSYNRLRCIPIHAFDG--LRSLRVL 625
Query: 194 DLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSR- 252
L + + E +F + T L L L NPL D S L+ L++ + + G++R
Sbjct: 626 TLHGNDISS-VPEGSFSDLTSLSHLALGTNPLHC-DCS--LRWLSEWVKAGYKEPGIARC 681
Query: 253 ----------LPANTFHRFTCLQELDISHNPLIDAFTALLSPLES 287
L HRF C +DI N + L SP ++
Sbjct: 682 SSPEPMADRLLLTTPTHRFQCKGPVDI--NIVAKCNACLSSPCKN 724
Score = 50 (22.7 bits), Expect = 4.3e-11, Sum P(2) = 4.3e-11
Identities = 18/62 (29%), Positives = 29/62 (46%)
Query: 18 GLITINL---NANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSG 73
GL+++ L NAN I + F ++L L + + L I+ F L + L L+
Sbjct: 174 GLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQAIQTLHLAQ 233
Query: 74 NP 75
NP
Sbjct: 234 NP 235
>UNIPROTKB|F1MMM6 [details] [associations]
symbol:SLIT3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070100 "negative regulation of chemokine-mediated
signaling pathway" evidence=IEA] [GO:0061364 "apoptotic process
involved in luteolysis" evidence=IEA] [GO:0051414 "response to
cortisol stimulus" evidence=IEA] [GO:0050919 "negative chemotaxis"
evidence=IEA] [GO:0048846 "axon extension involved in axon
guidance" evidence=IEA] [GO:0048495 "Roundabout binding"
evidence=IEA] [GO:0035385 "Roundabout signaling pathway"
evidence=IEA] [GO:0032870 "cellular response to hormone stimulus"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0010629 "negative regulation of gene expression"
evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0008285
GO:GO:0005615 GO:GO:0030308 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887 PROSITE:PS01186
GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 GO:GO:0048846 GO:GO:0070100 Pfam:PF12661
GO:GO:0051414 GeneTree:ENSGT00700000104083 GO:GO:0050919
GO:GO:0035385 GO:GO:0061364 OMA:SVDCHGL EMBL:DAAA02049822
EMBL:DAAA02049823 EMBL:DAAA02049824 EMBL:DAAA02049825
EMBL:DAAA02049826 EMBL:DAAA02049827 IPI:IPI01017433
Ensembl:ENSBTAT00000049620 Uniprot:F1MMM6
Length = 1339
Score = 170 (64.9 bits), Expect = 5.0e-09, Sum P(2) = 5.0e-09
Identities = 80/304 (26%), Positives = 126/304 (41%)
Query: 60 FTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLEL 119
F L L K++LS N ++ ++ G FD S++ L+L L AF L+ LKTL L
Sbjct: 367 FKKLPNLRKINLSNNRIKEVKEGAFDGAASVQELVLTGNQLETAHGRAFRGLSGLKTLML 426
Query: 120 SQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENEL-IDLD 178
N + + T L + L L + I+ + F L +NL N +
Sbjct: 427 RSNLISCVSNDTFA--GLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNCH 484
Query: 179 VATTLGQNLVHLDSLDLSNCHLKGPLS-EDAFVNATKLRTLYLSGNPLSAADLSVALKPL 237
+A LG+ L + N + P ++ + ++ GN S+ L
Sbjct: 485 LAW-LGKWL-RKRRIVSGNPRCQKPFFLKEIPIQDVAIQDFTCDGNDESSCQLGPRCPEQ 542
Query: 238 TKLHRLSLR--NCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHL---D 292
+R N GL LP T EL + N L TA+ L S HL D
Sbjct: 543 CTCVETVVRCSNRGLRALPKGIPKDVT---ELYLEGNHL----TAVPKELSSFRHLTLID 595
Query: 293 MGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNET 352
+ +++ ++ TF M+ L TLILS N+L + F L L VL L+ ++ + E
Sbjct: 596 LSNNSIGMLTNYTFSNMSHLSTLILSYNRLRCIPVHSFNGLRSLRVLTLHGNDISSVPEG 655
Query: 353 VFHE 356
F++
Sbjct: 656 SFND 659
Score = 168 (64.2 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 76/337 (22%), Positives = 148/337 (43%)
Query: 42 LLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLT 101
++ + +++ ++ I FT L ++D+S N + I P F L SL L+L +T
Sbjct: 123 IVEIRLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKIT 182
Query: 102 YISPSAFDNLNHLKTLELSQNKLKS-HIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFAN 160
I FD L L+ L L+ NK+ ++ +L L L L + + + +FA
Sbjct: 183 EIPKGLFDGLVSLQLLLLNANKINCLRVN---TFQDLQSLSLLSLYDNKLQTISKGLFAP 239
Query: 161 NTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLS-EDAFVNATKLRTLY 219
++ L+LA+N + D + + + ++ S P + ++ K +
Sbjct: 240 LQAIQTLHLAQNPFV-CDCHLRWLADYLQDNPIETSGARCSSPRRLANKRISQIKSKKFR 298
Query: 220 LSGNP-LSAADLSVALKPLTKLHRL----SLRNCG---LSRLPANTFHRFTCLQELDISH 271
SG+ + S L R ++ +C L+R+P++ T L+ L+ +
Sbjct: 299 CSGSEDYRSRFSSECFMDLVCPDRCRCEGTIVDCSNQKLARIPSHLPEYVTDLR-LNDNE 357
Query: 272 NPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQ 331
+++A T + L +L +++ + ++ + F S++ L+L+GN+LET F+
Sbjct: 358 ISVLEA-TGIFKKLPNLRKINLSNNRIKEVKEGAFDGAASVQELVLTGNQLETAHGRAFR 416
Query: 332 NLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRL 368
L+ L L L + L V N T+ L +RL
Sbjct: 417 GLSGLKTLMLRS----NLISCV--SNDTFAGLSSVRL 447
Score = 149 (57.5 bits), Expect = 2.5e-14, Sum P(3) = 2.5e-14
Identities = 44/132 (33%), Positives = 66/132 (50%)
Query: 18 GLITINLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPL 76
G++ I L N I+ + GAF + L + + + +S I P F L +L L L GN +
Sbjct: 122 GIVEIRLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKI 181
Query: 77 RIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGN 136
I G+FD L SL+ L+LN + + + F +L L L L NKL++ I L
Sbjct: 182 TEIPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQSLSLLSLYDNKLQT-ISKGL-FAP 239
Query: 137 LGKLDTLDLRQS 148
L + TL L Q+
Sbjct: 240 LQAIQTLHLAQN 251
Score = 133 (51.9 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 84/326 (25%), Positives = 145/326 (44%)
Query: 69 LDLSGNPLRIIEP-GVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKS- 126
L L+ N + ++E G+F L +L + L+ + + AFD ++ L L+ N+L++
Sbjct: 351 LRLNDNEISVLEATGIFKKLPNLRKINLSNNRIKEVKEGAFDGAASVQELVLTGNQLETA 410
Query: 127 HIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVA--TTL- 183
H L L TL LR + IS + ++ FA + +R L+L +N + + TTL
Sbjct: 411 H---GRAFRGLSGLKTLMLRSNLISCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLV 467
Query: 184 GQNLVHLDSLDLS-NCHLK--GP-LSEDAFV--NATKLRTLYLSGNPLSAADLSVALKPL 237
+ ++L S + NCHL G L + V N + +L P+ VA++
Sbjct: 468 SLSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPFFLKEIPIQ----DVAIQDF 523
Query: 238 TKLHRLSLRNCGLS-RLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYS 296
T +C L R P + TC++ + N + A + P + E L + +
Sbjct: 524 T-CDGNDESSCQLGPRCP----EQCTCVETVVRCSNRGLRALPKGI-PKDVTE-LYLEGN 576
Query: 297 NLQRISR--STFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVF 354
+L + + S+F +T + LS N + L + F N++HLS L L+ RL
Sbjct: 577 HLTAVPKELSSFRHLTLID---LSNNSIGMLTNYTFSNMSHLSTLILS---YNRLRCIPV 630
Query: 355 HENYTYPDLEELRLSGNPLHVLPDST 380
H L L L GN + +P+ +
Sbjct: 631 HSFNGLRSLRVLTLHGNDISSVPEGS 656
Score = 130 (50.8 bits), Expect = 9.0e-08, Sum P(3) = 9.0e-08
Identities = 51/202 (25%), Positives = 87/202 (43%)
Query: 182 TLGQNLVHLDSLDLSNCHLK-----GPLSEDAFVNATKLR---TLYLSGNPLSAADLSVA 233
TL VHL ++++ K GP SE NA + S N + +
Sbjct: 54 TLCMAPVHLRGFNVADVQKKEYVCSGPHSEPPACNANSISCPSACTCSNNIVDCRGKGLT 113
Query: 234 LKPLTK---LHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEH 290
P + + L + +PA F ++ L+ +DIS N + D L+SL
Sbjct: 114 EIPANLPEGIVEIRLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTS 173
Query: 291 LDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLN 350
L + + + I + F + SL+ L+L+ NK+ L FQ+L LS+L L + L ++
Sbjct: 174 LVLYGNKITEIPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQSLSLLSLYDNKLQTIS 233
Query: 351 ETVFHENYTYPDLEELRLSGNP 372
+ +F ++ L L+ NP
Sbjct: 234 KGLFAPLQA---IQTLHLAQNP 252
Score = 122 (48.0 bits), Expect = 2.5e-14, Sum P(3) = 2.5e-14
Identities = 44/175 (25%), Positives = 77/175 (44%)
Query: 218 LYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDA 277
L L+ N +S + + K L L +++L N + + F +QEL ++ N L A
Sbjct: 351 LRLNDNEISVLEATGIFKKLPNLRKINLSNNRIKEVKEGAFDGAASVQELVLTGNQLETA 410
Query: 278 FTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLS 337
L L+ L + + + +S TF ++S++ L L N++ T+ G F L LS
Sbjct: 411 HGRAFRGLSGLKTLMLRSNLISCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLS 470
Query: 338 VLELNNCGLTRLNETVFHENYTYPDLEELRL-SGNPLHVLPDSTKQYSMRTIPTQ 391
+ L L+ H + L + R+ SGNP P K+ ++ + Q
Sbjct: 471 TINL----LSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQ 521
Score = 81 (33.6 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 29/100 (29%), Positives = 44/100 (44%)
Query: 218 LYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDA 277
LYL GN L+A L L + L N + L TF + L L +S+N L
Sbjct: 571 LYLEGNHLTAVPKE--LSSFRHLTLIDLSNNSIGMLTNYTFSNMSHLSTLILSYNRLRCI 628
Query: 278 FTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLIL 317
+ L SL L + +++ + +F +TSL L+L
Sbjct: 629 PVHSFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLLL 668
Score = 75 (31.5 bits), Expect = 9.0e-08, Sum P(3) = 9.0e-08
Identities = 24/131 (18%), Positives = 51/131 (38%)
Query: 417 PDLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLAN 476
P+L ++ LS N + + G +++ F + +L L +
Sbjct: 371 PNLRKINLSNNRIKEVKEGAFDGAASVQELVLTGN--QLETAHGRAFRGLSGLKTLMLRS 428
Query: 477 NNLSMTSELSFQFXXXXXXXXXXXXXXXXXTHISPTVLRHNRAITSIKLVGNPWKCDCNI 536
N +S S +F T I+P ++++I L+ NP+ C+C++
Sbjct: 429 NLISCVSNDTF---AGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNCHL 485
Query: 537 ADMWEWATREK 547
A + +W + +
Sbjct: 486 AWLGKWLRKRR 496
Score = 54 (24.1 bits), Expect = 5.0e-09, Sum P(2) = 5.0e-09
Identities = 19/62 (30%), Positives = 29/62 (46%)
Query: 18 GLITINL---NANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSG 73
GL+++ L NAN I + F +SL L + + L I+ F L + L L+
Sbjct: 191 GLVSLQLLLLNANKINCLRVNTFQDLQSLSLLSLYDNKLQTISKGLFAPLQAIQTLHLAQ 250
Query: 74 NP 75
NP
Sbjct: 251 NP 252
Score = 54 (24.1 bits), Expect = 9.0e-08, Sum P(3) = 9.0e-08
Identities = 12/38 (31%), Positives = 22/38 (57%)
Query: 95 LNRCNLTYISPSAFDNLNHLKTLELSQNKL--KSHIDW 130
LN N++ I ++F+++ ++TL L N L H+ W
Sbjct: 2 LNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAW 39
Score = 52 (23.4 bits), Expect = 2.5e-14, Sum P(3) = 2.5e-14
Identities = 24/103 (23%), Positives = 41/103 (39%)
Query: 385 MRTIPTQIWKNFDFLVILFILNETVFHENYTYPDLEELRLSGNPLHVLPTGNXXXXXXXX 444
+R +P I K+ L + V E ++ L + LS N + +L N
Sbjct: 557 LRALPKGIPKDVTELYLEGNHLTAVPKELSSFRHLTLIDLSNNSIGMLT--NYTFSNMSH 614
Query: 445 XXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSF 487
++ +P + FN R++ L L N++S E SF
Sbjct: 615 LSTLILSYNRLRCIPVHSFNGLRSLRVLTLHGNDISSVPEGSF 657
Score = 46 (21.3 bits), Expect = 6.9e-05, Sum P(3) = 6.9e-05
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 462 VFNNTRNITSLNLANNNLSMTSELSF 487
+F N+ +NL+NN + E +F
Sbjct: 366 IFKKLPNLRKINLSNNRIKEVKEGAF 391
>WB|WBGene00011345 [details] [associations]
symbol:dma-1 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016358
"dendrite development" evidence=IMP] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
HSSP:Q9BZR6 GeneTree:ENSGT00700000104286 EMBL:Z75713 PIR:T24315
RefSeq:NP_492253.1 ProteinModelPortal:Q22075 SMR:Q22075
STRING:Q22075 PaxDb:Q22075 EnsemblMetazoa:T01G9.3 GeneID:187968
KEGG:cel:CELE_T01G9.3 UCSC:T01G9.3 CTD:187968 WormBase:T01G9.3
HOGENOM:HOG000017308 InParanoid:Q22075 OMA:LTMANTH NextBio:937126
Uniprot:Q22075
Length = 603
Score = 217 (81.4 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 102/349 (29%), Positives = 154/349 (44%)
Query: 87 LTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLR 146
L SLE L L+ N+ + + S F + L+ L+LS N L +I T V L L +L L
Sbjct: 110 LPSLEVLDLHSNNIEHATMSNFGGMPKLRVLDLSSNHL--NILPTGVFTYLRALRSLSLS 167
Query: 147 QSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSE 206
+ IS+L N+ LR L L N I ++ L ++ LD L L++C+L S
Sbjct: 168 NNTISDLSTNLLRGLNSLRVLRLDRNP-IPIEHINELFTDVSQLDELYLNHCNLSSIYSL 226
Query: 207 DAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQE 266
A +LR L + GN L L+ L +L L L + + + A F T + +
Sbjct: 227 -ALDRIPQLRQLGIGGNNLKMVPTK-ELRSLPQLSVLDLSHNSIQEITACAFCN-TNISK 283
Query: 267 LDISHNPL---IDA-FTALLSPLESLEHLDMGYSNLQRISRSTFL--KMTSLKTLILSGN 320
LD+SHN L D+ F L HLD+ ++++ S +L L ++ LSGN
Sbjct: 284 LDLSHNLLGISKDSPFNEDAFRTMPLRHLDLSFNHMNDFD-SKWLGWAQEELTSIALSGN 342
Query: 321 KLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDST 380
L+ E L L LEL + Y L L +SGN L LPD+
Sbjct: 343 FLKNFEESWTYTLKSLIHLEL---AYNHIKFIPVQLPSRYYHLISLNISGNELTYLPDN- 398
Query: 381 KQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTY-PDLEELRLSGNP 428
+ T+ + K FD F T H + + ++E++ + GNP
Sbjct: 399 ----INTLLPNV-KTFDITANRF---HTFSHTDLAFLNNVEQVYVDGNP 439
Score = 186 (70.5 bits), Expect = 6.2e-11, P = 6.2e-11
Identities = 79/309 (25%), Positives = 139/309 (44%)
Query: 17 PGLITINLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNP 75
P L ++L++N + + G F R+L L + T+S ++ L +L L L NP
Sbjct: 135 PKLRVLDLSSNHLNILPTGVFTYLRALRSLSLSNNTISDLSTNLLRGLNSLRVLRLDRNP 194
Query: 76 LRIIEPG-VFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVL 134
+ I +F ++ L+ L LN CNL+ I A D + L+ L + N LK + T L
Sbjct: 195 IPIEHINELFTDVSQLDELYLNHCNLSSIYSLALDRIPQLRQLGIGGNNLKM-VP-TKEL 252
Query: 135 GNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVH---LD 191
+L +L LDL + I + F N T + L+L+ N L+ + + ++ L
Sbjct: 253 RSLPQLSVLDLSHNSIQEITACAFCN-TNISKLDLSHN-LLGISKDSPFNEDAFRTMPLR 310
Query: 192 SLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLS 251
LDLS H+ S+ +L ++ LSGN L + S + +H L L +
Sbjct: 311 HLDLSFNHMNDFDSKWLGWAQEELTSIALSGNFLKNFEESWTYTLKSLIH-LELAYNHIK 369
Query: 252 RLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTS 311
+P R+ L L+IS N L + + L +++ D+ + S + + +
Sbjct: 370 FIPVQLPSRYYHLISLNISGNELTYLPDNINTLLPNVKTFDITANRFHTFSHTDLAFLNN 429
Query: 312 LKTLILSGN 320
++ + + GN
Sbjct: 430 VEQVYVDGN 438
Score = 178 (67.7 bits), Expect = 4.6e-10, P = 4.6e-10
Identities = 87/323 (26%), Positives = 146/323 (45%)
Query: 60 FTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLEL 119
F + L LDLS N L I+ GVF L +L L L+ ++ +S + LN L+ L L
Sbjct: 131 FGGMPKLRVLDLSSNHLNILPTGVFTYLRALRSLSLSNNTISDLSTNLLRGLNSLRVLRL 190
Query: 120 SQNKLK-SHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLD 178
+N + HI+ ++ +LD L L +S++ LR L + N L
Sbjct: 191 DRNPIPIEHINELFT--DVSQLDELYLNHCNLSSIYSLALDRIPQLRQLGIGGNNL--KM 246
Query: 179 VATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLT 238
V T ++L L LDLS+ ++ ++ AF N T + L LS N L + S P
Sbjct: 247 VPTKELRSLPQLSVLDLSHNSIQ-EITACAFCN-TNISKLDLSHNLLGISKDS----PFN 300
Query: 239 K--LHRLSLRNCGLSRLPANTFHR--FTCLQE----LDISHNPLIDAFTALLSPLESLEH 290
+ + LR+ LS N F QE + +S N L + + L+SL H
Sbjct: 301 EDAFRTMPLRHLDLSFNHMNDFDSKWLGWAQEELTSIALSGNFLKNFEESWTYTLKSLIH 360
Query: 291 LDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLN 350
L++ Y++++ I + L +L +SGN+L L + L ++ ++ R +
Sbjct: 361 LELAYNHIKFIPVQLPSRYYHLISLNISGNELTYLPDNINTLLPNVKTFDIT---ANRFH 417
Query: 351 ETVFHENYTY-PDLEELRLSGNP 372
T H + + ++E++ + GNP
Sbjct: 418 -TFSHTDLAFLNNVEQVYVDGNP 439
Score = 171 (65.3 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 83/300 (27%), Positives = 128/300 (42%)
Query: 137 LGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLS 196
L L+ LDL + I + + F LR L+L+ N L L T + L L SL LS
Sbjct: 110 LPSLEVLDLHSNNIEHATMSNFGGMPKLRVLDLSSNHLNILP--TGVFTYLRALRSLSLS 167
Query: 197 NCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPAN 256
N + LS + LR L L NP+ ++ +++L L L +C LS + +
Sbjct: 168 NNTISD-LSTNLLRGLNSLRVLRLDRNPIPIEHINELFTDVSQLDELYLNHCNLSSIYSL 226
Query: 257 TFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLI 316
R L++L I N L T L L L LD+ ++++Q I+ F T++ L
Sbjct: 227 ALDRIPQLRQLGIGGNNLKMVPTKELRSLPQLSVLDLSHNSIQEITACAFCN-TNISKLD 285
Query: 317 LSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENY---TYPDLEELRLSGNPL 373
LS N L + F N + L + L+ + F + +L + LSGN L
Sbjct: 286 LSHNLLGISKDSPF-NEDAFRTMPLRHLDLSFNHMNDFDSKWLGWAQEELTSIALSGNFL 344
Query: 374 HVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTYPDLEELRLSGNPLHVLP 433
+S Y+++++ I + I FI Y + L L +SGN L LP
Sbjct: 345 KNFEESWT-YTLKSL---IHLELAYNHIKFI--PVQLPSRYYH--LISLNISGNELTYLP 396
Score = 133 (51.9 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 69/256 (26%), Positives = 112/256 (43%)
Query: 236 PLT--KLHRLSLRN-CGLSRLPAN-TFHRFTCLQELDISHNPLIDAFTALLSPLESLEHL 291
PLT LH N G ++L N +RF L+ L + N I A + + L SLE L
Sbjct: 59 PLTLRSLHIQPPSNRIGSNKLRWNDNINRFAQLRVLRLI-NCQIPAMSRSIR-LPSLEVL 116
Query: 292 DMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNE 351
D+ +N++ + S F M L+ L LS N L L +G+F L L L L+N ++ L+
Sbjct: 117 DLHSNNIEHATMSNFGGMPKLRVLDLSSNHLNILPTGVFTYLRALRSLSLSNNTISDLST 176
Query: 352 TVFHENYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFH 411
+ L LRL NP+ + + ++ + +++ N L ++ L
Sbjct: 177 NLLRG---LNSLRVLRLDRNPIPI-EHINELFTDVSQLDELYLNHCNLSSIYSLALD--- 229
Query: 412 ENYTYPDLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITS 471
P L +L + GN L ++PT I + F NT NI+
Sbjct: 230 ---RIPQLRQLGIGGNNLKMVPTKELRSLPQLSVLDLSHNS--IQEITACAFCNT-NISK 283
Query: 472 LNLANNNLSMTSELSF 487
L+L++N L ++ + F
Sbjct: 284 LDLSHNLLGISKDSPF 299
Score = 128 (50.1 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 62/252 (24%), Positives = 106/252 (42%)
Query: 12 RNLDNPGLITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDL 71
R L++ ++ ++ N PI+ + F L LY+ C LS I + L +L +
Sbjct: 180 RGLNSLRVLRLDRNPIPIEHINELFTDVSQLDELYLNHCNLSSIYSLALDRIPQLRQLGI 239
Query: 72 SGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWT 131
GN L+++ L L L L+ ++ I+ AF N N + L+LS N L D
Sbjct: 240 GGNNLKMVPTKELRSLPQLSVLDLSHNSIQEITACAFCNTN-ISKLDLSHNLLGISKDSP 298
Query: 132 LVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLD 191
N T+ LR +S N F ++ WL A+ EL + ++ +N
Sbjct: 299 F---NEDAFRTMPLRHLDLSFNHMNDF-DSKWL---GWAQEELTSIALSGNFLKNFEESW 351
Query: 192 SLDLSNC-HLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGL 250
+ L + HL+ + F+ +L + Y L+ + + P ++ L L N
Sbjct: 352 TYTLKSLIHLELAYNHIKFI-PVQLPSRYYHLISLNISGNELTYLP-DNINTL-LPNVKT 408
Query: 251 SRLPANTFHRFT 262
+ AN FH F+
Sbjct: 409 FDITANRFHTFS 420
Score = 42 (19.8 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 10/39 (25%), Positives = 16/39 (41%)
Query: 251 SRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLE 289
SR P + +C + +H PL F L E+ +
Sbjct: 545 SRTPLTMANTHSCSSSTNDTHGPLSPPFDPFLVSTETFK 583
>UNIPROTKB|F1PSS7 [details] [associations]
symbol:SLIT1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005576 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 Pfam:PF12661 Pfam:PF01463 GeneTree:ENSGT00700000104083
OMA:KCVHGKC EMBL:AAEX03015440 Ensembl:ENSCAFT00000014303
Uniprot:F1PSS7
Length = 1534
Score = 210 (79.0 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
Identities = 98/380 (25%), Positives = 162/380 (42%)
Query: 17 PGLIT-INLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGN 74
P +T I L N I+ + GAF R L + + +++I P F L +LN L L GN
Sbjct: 308 PETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGN 367
Query: 75 PLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVL 134
+ + GVF L +L+ L+LN + + P AF +L +L L L NK++S T
Sbjct: 368 KITDLPRGVFGGLYTLQLLLLNANKINCVRPDAFQDLQNLSLLSLYDNKIQSLAKGTFT- 426
Query: 135 GNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLD 194
+L + TL L Q+ P N WL + L N + + L +
Sbjct: 427 -SLRAIQTLHLAQN-----PFICDCNLKWLADF-LRTNPIETSGARCASPRRLANKRIGQ 479
Query: 195 LSNCHLKGPLSEDAFVNATKLRTLYLSGN-----P------LSAADLSVALKPLTKLHR- 242
+ + + E F+ T+ L N P S A+ S +LK LTK+
Sbjct: 480 IKSKKFRCSAKEQYFIPGTEDYQLNSECNSDAVCPHKCRCEASLAECS-SLK-LTKIPER 537
Query: 243 -------LSLRNCGLSRLPAN-TFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMG 294
L L N +S L A F + T L+++++S+N + + S+ L +
Sbjct: 538 IPQSTAELRLNNNEISILEATGIFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLT 597
Query: 295 YSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVF 354
+ L+ I F + L+TL+L N++ + + F L ++ +L L + + ++ F
Sbjct: 598 ANQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIATISPGAF 657
Query: 355 HENYTYPDLEELRLSGNPLH 374
T L L L NP +
Sbjct: 658 D---TLQALSTLNLLANPFN 674
Score = 188 (71.2 bits), Expect = 6.0e-12, Sum P(2) = 6.0e-12
Identities = 94/353 (26%), Positives = 151/353 (42%)
Query: 38 VARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNR 97
+ RS L + +++I+ F L L L L N + ++E G FD + LE L LNR
Sbjct: 59 IPRSTERLELNGNNITRIHKNDFVGLKQLRVLQLMENQIGVVERGAFDDMKELERLRLNR 118
Query: 98 CNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNV 157
L + F N L L+LS+N +++ I G L L L ++ IS + +
Sbjct: 119 NQLHTLPELLFQNNQALSRLDLSENTIQA-IPRKAFRGATD-LKNLQLDKNQISCIEEGA 176
Query: 158 FANNTWLRNLNLAENELIDLDVAT-----TLGQNLVHLDSLDLSNCHLKGPLSEDAFVNA 212
F L L L N + + V++ L +H + L +CHL LS+
Sbjct: 177 FRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHL-FCDCHLAW-LSQWLRQRP 234
Query: 213 TKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHN 272
T SG P S L+VA ++ G R+P+ T +C S N
Sbjct: 235 TIGLFTQCSG-PASLRGLNVAEVQKSEFSCSGQGEAG--RVPSCTLSSGSCPAMCSCS-N 290
Query: 273 PLIDA----FTALLSPL-ESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLES 327
++D TA+ + L E++ + + + ++ I F L+ + LS N++ +
Sbjct: 291 GIVDCRGKGLTAIPANLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAP 350
Query: 328 GLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLH-VLPDS 379
FQ L L+ L L +T L VF YT L+ L L+ N ++ V PD+
Sbjct: 351 DAFQGLRSLNSLVLYGNKITDLPRGVFGGLYT---LQLLLLNANKINCVRPDA 400
Score = 186 (70.5 bits), Expect = 9.8e-12, Sum P(2) = 9.8e-12
Identities = 84/334 (25%), Positives = 138/334 (41%)
Query: 15 DNPGLITINLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSG 73
D L + LN N + + E F ++L L + E T+ I + F T L L L
Sbjct: 107 DMKELERLRLNRNQLHTLPELLFQNNQALSRLDLSENTIQAIPRKAFRGATDLKNLQLDK 166
Query: 74 NPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKL--KSHIDWT 131
N + IE G F L LE L LN N+T I S+F+++ L+T L N L H+ W
Sbjct: 167 NQISCIEEGAFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWL 226
Query: 132 LVLGNLGKLDTLDL--RQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVH 189
L + T+ L + SG ++L A + E + T +
Sbjct: 227 SQW--LRQRPTIGLFTQCSGPASLRGLNVAEVQKSEFSCSGQGEAGRVPSCTLSSGSCPA 284
Query: 190 LDSLD--LSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRN 247
+ S + +C KG + A + T + + L N + + A P KL R+ L N
Sbjct: 285 MCSCSNGIVDCRGKGLTAIPANLPET-MTEIRLELNGIKSIPPG-AFSPYRKLRRIDLSN 342
Query: 248 CGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFL 307
++ + + F L L + N + D + L +L+ L + + + + F
Sbjct: 343 NQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLNANKINCVRPDAFQ 402
Query: 308 KMTSLKTLILSGNKLETLESGLFQNLTHLSVLEL 341
+ +L L L NK+++L G F +L + L L
Sbjct: 403 DLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHL 436
Score = 151 (58.2 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 88/314 (28%), Positives = 125/314 (39%)
Query: 22 INLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIE 80
INL+ N + +E GAF A S+ L++ L I F L L L L N + I
Sbjct: 570 INLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIH 629
Query: 81 PGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKL 140
F L ++ L L + ISP AFD L L TL L N + L LG
Sbjct: 630 NDSFTGLRNVRLLSLYDNQIATISPGAFDTLQALSTLNLLANPFNCNCQ----LAWLG-- 683
Query: 141 DTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDL------DVATTLG-----QNLVH 189
D L R+ N P N +LR + L + D + + L Q
Sbjct: 684 DWLRRRKIVTGN-PR--CQNPDFLRQIPLQDVAFPDFRCEEGQEEGSCLPRPQCPQECAC 740
Query: 190 LDSL-DLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNC 248
LD++ SN HL L + N T+L YL GN + + L L + L N
Sbjct: 741 LDTVVRCSNKHLH-VLPKGIPKNVTEL---YLDGNQFTL--VPGQLSTFKYLQLVDLSNN 794
Query: 249 GLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLK 308
+S L ++F + L L +S+N L L SL L + +++ + F
Sbjct: 795 KISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLHGNDISTLREGIFTD 854
Query: 309 MTSLKTLILSGNKL 322
+TSL L + N L
Sbjct: 855 VTSLSHLAIGANPL 868
Score = 119 (46.9 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 30/93 (32%), Positives = 49/93 (52%)
Query: 282 LSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLEL 341
LS + L+ +D+ + + +S S+F M+ L TLILS N L+ + FQ L L +L L
Sbjct: 780 LSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSL 839
Query: 342 NNCGLTRLNETVFHENYTYPDLEELRLSGNPLH 374
+ ++ L E +F + L L + NPL+
Sbjct: 840 HGNDISTLREGIFTD---VTSLSHLAIGANPLY 869
Score = 108 (43.1 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 27/81 (33%), Positives = 43/81 (53%)
Query: 261 FTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGN 320
F LQ +D+S+N + + + + L L + Y+ LQ I F + SL+ L L GN
Sbjct: 783 FKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLHGN 842
Query: 321 KLETLESGLFQNLTHLSVLEL 341
+ TL G+F ++T LS L +
Sbjct: 843 DISTLREGIFTDVTSLSHLAI 863
Score = 108 (43.1 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 90/426 (21%), Positives = 162/426 (38%)
Query: 143 LDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKG 202
+D R G++ +P N+ T +R L L + I + + L +DLSN +
Sbjct: 293 VDCRGKGLTAIPANLPETMTEIR-LELNGIKSIPPGAFSPYRK----LRRIDLSNNQI-A 346
Query: 203 PLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFT 262
++ DAF L +L L GN ++ V L L L L ++ + + F
Sbjct: 347 EIAPDAFQGLRSLNSLVLYGNKITDLPRGV-FGGLYTLQLLLLNANKINCVRPDAFQDLQ 405
Query: 263 CLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTL--ILSGN 320
L L + N + + L +++ L ++++ F+ +LK L L N
Sbjct: 406 NLSLLSLYDNKIQSLAKGTFTSLRAIQTL--------HLAQNPFICDCNLKWLADFLRTN 457
Query: 321 KLETLESGLFQNLTHLSVLELNNCGLTRLNETVFH----ENYTYPDLEELRLSG--NPLH 374
+ET SG S L N + ++ F E Y P E+ +L+ N
Sbjct: 458 PIET--SGA----RCASPRRLANKRIGQIKSKKFRCSAKEQYFIPGTEDYQLNSECNSDA 511
Query: 375 VLPDSTK---------QYSMRTIPTQIWKNFDFLVI----LFILNETVFHENYTYPDLEE 421
V P + + IP +I ++ L + + IL T + T+ L++
Sbjct: 512 VCPHKCRCEASLAECSSLKLTKIPERIPQSTAELRLNNNEISILEATGIFKKLTH--LKK 569
Query: 422 LRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNLSM 481
+ LS N + + G +++ + +F + +L L NN +S
Sbjct: 570 INLSNNKVSEIEDGAFEGAASVSELHLTAN--QLESIRSGMFRGLDGLRTLMLRNNRISC 627
Query: 482 TSELSFQFXXXXXXXXXXXXXXXXXTHISPTVLRHNRAITSIKLVGNPWKCDCNIADMWE 541
SF ISP +A++++ L+ NP+ C+C +A + +
Sbjct: 628 IHNDSF---TGLRNVRLLSLYDNQIATISPGAFDTLQALSTLNLLANPFNCNCQLAWLGD 684
Query: 542 WATREK 547
W R K
Sbjct: 685 WLRRRK 690
Score = 103 (41.3 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 34/107 (31%), Positives = 50/107 (46%)
Query: 19 LITINLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLR 77
L + L N I VE GAF + L L + L + F N L++LDLS N ++
Sbjct: 87 LRVLQLMENQIGVVERGAFDDMKELERLRLNRNQLHTLPELLFQNNQALSRLDLSENTIQ 146
Query: 78 IIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKL 124
I F T L+ L L++ ++ I AF L L+ L L+ N +
Sbjct: 147 AIPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNI 193
Score = 94 (38.1 bits), Expect = 6.7e-06, Sum P(2) = 6.7e-06
Identities = 82/351 (23%), Positives = 139/351 (39%)
Query: 150 ISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAF 209
++ +P+ + + LR LN NE+ L+ AT + + L HL ++LSN + + + AF
Sbjct: 531 LTKIPERIPQSTAELR-LN--NNEISILE-ATGIFKKLTHLKKINLSNNKVS-EIEDGAF 585
Query: 210 VNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDI 269
A + L+L+ N L + S + L L L LRN +R +C+
Sbjct: 586 EGAASVSELHLTANQLESIR-SGMFRGLDGLRTLMLRN-----------NRISCI----- 628
Query: 270 SHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLET--LES 327
HN D+FT L ++ L + + + IS F + +L TL L N +
Sbjct: 629 -HN---DSFTGL----RNVRLLSLYDNQIATISPGAFDTLQALSTLNLLANPFNCNCQLA 680
Query: 328 GLFQNLTHLSVLELN-NCGLTRLNETVFHENYTYPDL--EELRLSGN--PLHVLP----- 377
L L ++ N C + ++ +PD EE + G+ P P
Sbjct: 681 WLGDWLRRRKIVTGNPRCQNPDFLRQIPLQDVAFPDFRCEEGQEEGSCLPRPQCPQECAC 740
Query: 378 -DSTKQYS---MRTIPTQIWKNFDFLVILFILNETVFHENYTYPDLEELRLSGNPLHVLP 433
D+ + S + +P I KN L + V + T+ L+ + LS N + L
Sbjct: 741 LDTVVRCSNKHLHVLPKGIPKNVTELYLDGNQFTLVPGQLSTFKYLQLVDLSNNKISSL- 799
Query: 434 TGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNLSMTSE 484
N + +PP F R++ L+L N++S E
Sbjct: 800 -SNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLHGNDISTLRE 849
Score = 65 (27.9 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
Identities = 26/125 (20%), Positives = 46/125 (36%)
Query: 418 DLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANN 477
++ EL L GN ++P G KI L + F N +T+L L+ N
Sbjct: 762 NVTELYLDGNQFTLVP-GQLSTFKYLQLVDLSNN--KISSLSNSSFTNMSQLTTLILSYN 818
Query: 478 NLSMTSELSFQFXXXXXXXXXXXXXXXXXTHISPTVLRHNRAITSIKLVGNPWKCDCNIA 537
L L+FQ + + + +++ + + NP CDC++
Sbjct: 819 ALQCIPPLAFQ---GLRSLRLLSLHGNDISTLREGIFTDVTSLSHLAIGANPLYCDCHLR 875
Query: 538 DMWEW 542
+ W
Sbjct: 876 WLSSW 880
>WB|WBGene00003915 [details] [associations]
symbol:pan-1 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0018996 "molting cycle, collagen and cuticulin-based cuticle"
evidence=IMP] InterPro:IPR001611 PROSITE:PS51450 GO:GO:0040007
GO:GO:0002119 GO:GO:0018996 InterPro:IPR003591 SMART:SM00369
GO:GO:0040011 InterPro:IPR025875 Pfam:PF12799 HSSP:P25147
EMBL:Z34802 GeneTree:ENSGT00700000104056 GeneID:175596
KEGG:cel:CELE_M88.6 UCSC:M88.6b CTD:175596 HOGENOM:HOG000021363
NextBio:888834 PIR:T23841 RefSeq:NP_497925.1
ProteinModelPortal:Q9U3A0 SMR:Q9U3A0 PRIDE:Q9U3A0
EnsemblMetazoa:M88.6b WormBase:M88.6b ArrayExpress:Q9U3A0
Uniprot:Q9U3A0
Length = 594
Score = 208 (78.3 bits), Expect = 3.0e-14, Sum P(3) = 3.0e-14
Identities = 95/329 (28%), Positives = 145/329 (44%)
Query: 22 INLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIE 80
++L N I+ +E G F +SL L + + +I+ F L + +L L+ N +R+++
Sbjct: 132 LSLRENRIKKLEKGLFTGLKSLKTLDLAMNKIQEIDVGAFEELKKVEELLLNENDIRVLK 191
Query: 81 PGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKL 140
G FD + +L+ L L CNL I AF LN L+ L LS N L++ IDWT + L L
Sbjct: 192 TGTFDGMKNLKKLTLQNCNLEIIQKGAFRGLNSLEQLILSNNNLEN-IDWT-IFSALKNL 249
Query: 141 DTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQ--NLVHLDSLDLSNC 198
LDL + ISN+ F L L L N ID + L +LV + D +
Sbjct: 250 RVLDLGSNKISNVEMKSFPK---LEKLVL-NNNTIDSMKSIKLKDLPSLV-VALFDRNKI 304
Query: 199 HLKGPLSEDAFVNATKLRTLYLSGNPLS---------AADLSVALKPLTKLHRLSLRNCG 249
G + + ++ TL L+ N LS +L L ++ LS +
Sbjct: 305 ESIGDMDMFGLTRSDRIETLSLARNNLSQISPKAFQHTPNLITLLLQYNQIEELSSHSPS 364
Query: 250 LSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKM 309
R P L L +S N L + L P +SL L + ++ + +I L+
Sbjct: 365 QVRTPF--LASLKKLVTLQLSSNNLSVIRSDEL-P-KSLSSLALDHNVISKIEARA-LEG 419
Query: 310 TSLKTLILSGNKLETLESGLFQNLTHLSV 338
+K L L NKL L G F + + SV
Sbjct: 420 MEIKRLYLHSNKLNYLYQGTFDSFSPKSV 448
Score = 177 (67.4 bits), Expect = 8.0e-11, Sum P(3) = 8.0e-11
Identities = 74/291 (25%), Positives = 131/291 (45%)
Query: 204 LSED-AFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFT 262
+SE+ A +N T+L L + + ++ + K ++ L CGLS L N+F
Sbjct: 69 VSENLASLNGTELGRLTIRDSTVNVLPQDLFENVFAK--QVKLERCGLSTLQPNSFQSLG 126
Query: 263 CLQEL-DISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNK 321
EL + N + L + L+SL+ LD+ + +Q I F ++ ++ L+L+ N
Sbjct: 127 GSAELLSLRENRIKKLEKGLFTGLKSLKTLDLAMNKIQEIDVGAFEELKKVEELLLNEND 186
Query: 322 LETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTK 381
+ L++G F + +L L L NC L + + F LE+L LS N
Sbjct: 187 IRVLKTGTFDGMKNLKKLTLQNCNLEIIQKGAFRG---LNSLEQLILSNN---------- 233
Query: 382 QYSMRTIPTQIWKNFDFLVILFILNETVFH-ENYTYPDLEELRLSGNPLHVLPTGNXXXX 440
++ I I+ L +L + + + + E ++P LE+L L+ N + + +
Sbjct: 234 --NLENIDWTIFSALKNLRVLDLGSNKISNVEMKSFPKLEKLVLNNNTIDSMKSIKLKDL 291
Query: 441 XXXXXXXXXXXXCKIDYLPP-NVFNNTRN--ITSLNLANNNLSMTSELSFQ 488
KI+ + ++F TR+ I +L+LA NNLS S +FQ
Sbjct: 292 PSLVVALFDRN--KIESIGDMDMFGLTRSDRIETLSLARNNLSQISPKAFQ 340
Score = 171 (65.3 bits), Expect = 3.6e-10, Sum P(3) = 3.6e-10
Identities = 79/290 (27%), Positives = 124/290 (42%)
Query: 45 LYMQECTLSKINPQFFTNLTTLN-KLDLSGNPLRIIEPGVFDPLT-SLEYLMLNRCNLTY 102
L +++ T++ + F N+ KL+ G L ++P F L S E L L +
Sbjct: 84 LTIRDSTVNVLPQDLFENVFAKQVKLERCG--LSTLQPNSFQSLGGSAELLSLRENRIKK 141
Query: 103 ISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNT 162
+ F L LKTL+L+ NK++ ID L K++ L L ++ I L F
Sbjct: 142 LEKGLFTGLKSLKTLDLAMNKIQE-ID-VGAFEELKKVEELLLNENDIRVLKTGTFDGMK 199
Query: 163 WLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSG 222
L+ L L L + G N L+ L LSN +L+ + F LR L L
Sbjct: 200 NLKKLTLQNCNLEIIQKGAFRGLN--SLEQLILSNNNLEN-IDWTIFSALKNLRVLDLGS 256
Query: 223 NPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPL-----IDA 277
N +S +V +K KL +L L N + + + L N + +D
Sbjct: 257 NKIS----NVEMKSFPKLEKLVLNNNTIDSMKSIKLKDLPSLVVALFDRNKIESIGDMDM 312
Query: 278 FTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLES 327
F L+ + +E L + +NL +IS F +L TL+L N++E L S
Sbjct: 313 FG--LTRSDRIETLSLARNNLSQISPKAFQHTPNLITLLLQYNQIEELSS 360
Score = 164 (62.8 bits), Expect = 2.1e-09, Sum P(3) = 2.1e-09
Identities = 82/349 (23%), Positives = 150/349 (42%)
Query: 142 TLDLRQSGISNLPDNVFA-NNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHL 200
T++ + I+++ +N+ + N T L L + ++ + L L +N V + L C L
Sbjct: 58 TIECESASIASVSENLASLNGTELGRLTIRDSTVNVLP--QDLFEN-VFAKQVKLERCGL 114
Query: 201 KGPLSEDAFVN-ATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFH 259
L ++F + L L N + + + L L L L + + F
Sbjct: 115 S-TLQPNSFQSLGGSAELLSLRENRIKKLEKGL-FTGLKSLKTLDLAMNKIQEIDVGAFE 172
Query: 260 RFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSG 319
++EL ++ N + T +++L+ L + NL+ I + F + SL+ LILS
Sbjct: 173 ELKKVEELLLNENDIRVLKTGTFDGMKNLKKLTLQNCNLEIIQKGAFRGLNSLEQLILSN 232
Query: 320 NKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDS 379
N LE ++ +F L +L VL+L G +++ E ++P LE+L L+ N + DS
Sbjct: 233 NNLENIDWTIFSALKNLRVLDL---GSNKISNV---EMKSFPKLEKLVLNNNTI----DS 282
Query: 380 TKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTYPD-LEELRLSGNPL-HVLP---- 433
K ++ +P+ + FD I I + +F T D +E L L+ N L + P
Sbjct: 283 MKSIKLKDLPSLVVALFDRNKIESIGDMDMF--GLTRSDRIETLSLARNNLSQISPKAFQ 340
Query: 434 -TGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNLSM 481
T N + + + + +L L++NNLS+
Sbjct: 341 HTPNLITLLLQYNQIEELSSHSPSQVRTPFLASLKKLVTLQLSSNNLSV 389
Score = 139 (54.0 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 61/229 (26%), Positives = 99/229 (43%)
Query: 116 TLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELI 175
T+E + S + L N +L L +R S ++ LP ++F N + + + L L
Sbjct: 58 TIECESASIAS-VSENLASLNGTELGRLTIRDSTVNVLPQDLF-ENVFAKQVKLERCGLS 115
Query: 176 DLDVAT--TLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVA 233
L + +LG + + L L +K L + F L+TL L+ N + D+ A
Sbjct: 116 TLQPNSFQSLGGSA---ELLSLRENRIK-KLEKGLFTGLKSLKTLDLAMNKIQEIDVG-A 170
Query: 234 LKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDM 293
+ L K+ L L + L TF L++L + + L L SLE L +
Sbjct: 171 FEELKKVEELLLNENDIRVLKTGTFDGMKNLKKLTLQNCNLEIIQKGAFRGLNSLEQLIL 230
Query: 294 GYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELN 342
+NL+ I + F + +L+ L L NK+ +E F L L VL N
Sbjct: 231 SNNNLENIDWTIFSALKNLRVLDLGSNKISNVEMKSFPKLEKL-VLNNN 278
Score = 120 (47.3 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 59/254 (23%), Positives = 103/254 (40%)
Query: 138 GKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSN 197
G + L LR++ I L +F L+ L+LA N++ ++DV + L ++ L L+
Sbjct: 127 GSAELLSLRENRIKKLEKGLFTGLKSLKTLDLAMNKIQEIDVGAF--EELKKVEELLLNE 184
Query: 198 CHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANT 257
++ L F L+ L L L A + L L +L L N L +
Sbjct: 185 NDIR-VLKTGTFDGMKNLKKLTLQNCNLEIIQKG-AFRGLNSLEQLILSNNNLENIDWTI 242
Query: 258 FHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLIL 317
F L+ LD+ N + + + LE L + + + + + SL +
Sbjct: 243 FSALKNLRVLDLGSNKISNVE---MKSFPKLEKLVLNNNTIDSMKSIKLKDLPSLVVALF 299
Query: 318 SGNKLETL-ESGLFQNLTH---LSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPL 373
NK+E++ + +F LT + L L L++++ F P+L L L N +
Sbjct: 300 DRNKIESIGDMDMF-GLTRSDRIETLSLARNNLSQISPKAFQHT---PNLITLLLQYNQI 355
Query: 374 HVLPDSTKQYSMRT 387
L S +RT
Sbjct: 356 EEL-SSHSPSQVRT 368
Score = 55 (24.4 bits), Expect = 3.0e-14, Sum P(3) = 3.0e-14
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 518 RAITSIKLVGNPWKCDCNIADMWEWATR 545
+++ ++ + NPW C CN D EW R
Sbjct: 446 KSVEAVDVSLNPWVCVCN--DPKEWLPR 471
Score = 41 (19.5 bits), Expect = 3.0e-14, Sum P(3) = 3.0e-14
Identities = 15/81 (18%), Positives = 36/81 (44%)
Query: 600 WARYVKEADCPSSKLFRPPRTNSRKTRAAPSYINMEKLNSKSFLTLGN--FGLISVGVII 657
W +EAD L N + + E++ ++T+ ++++ +++
Sbjct: 472 WLEASEEADVAEGALGCLAIPNCGQKEGSTVMPEEEEVYRSGWITVAATILTIVTIVIMV 531
Query: 658 LSAMVYFSFYARHLYRTKQQR 678
+ AM+YF AR+ + + +R
Sbjct: 532 IIAMLYFKD-ARYQFPLRGRR 551
>WB|WBGene00022789 [details] [associations]
symbol:lron-2 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] InterPro:IPR001611 PROSITE:PS51450 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 InterPro:IPR003591 SMART:SM00369
GeneTree:ENSGT00700000104056 OMA:AMIKIGQ HSSP:P07359 EMBL:FO081193
PIR:T29972 RefSeq:NP_505402.1 ProteinModelPortal:Q23580 SMR:Q23580
STRING:Q23580 PaxDb:Q23580 EnsemblMetazoa:ZK682.5 GeneID:179309
KEGG:cel:CELE_ZK682.5 UCSC:ZK682.5 CTD:179309 WormBase:ZK682.5
eggNOG:NOG280691 HOGENOM:HOG000021591 InParanoid:Q23580
NextBio:904832 Uniprot:Q23580
Length = 575
Score = 216 (81.1 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 97/366 (26%), Positives = 169/366 (46%)
Query: 20 ITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTN--LTTLNKLDLSGNPL- 76
+TI A P P AF + ++L L + TL I+ Q F L +L +LDL+ N L
Sbjct: 64 LTILDTAIPTIPAN-AFQ-SFTILRLVLNRNTLQNIDDQAFNGPLLDSLIELDLNDNNLG 121
Query: 77 RIIEPGVFDPLTSLEYLMLNRCNLTYISPSAF---DNLNHLKTLELSQNKLK-SHIDWTL 132
+I + G+ L +L L LNR + +S +AF ++ + L LEL+ N+L + +
Sbjct: 122 QIPQTGI-PRLRNLRKLYLNRNRINQLSSTAFNAFESRDLLLKLELAGNRLTDATLGDAT 180
Query: 133 VLGNLGKLDTLDLRQSGISNLPDNVFAN--NTWLRNLNLAENELIDLDVATTLGQNLVHL 190
V L L L L + ++++P + N NT L NLNL N + ++ V L L
Sbjct: 181 VFRPLTLLQELSLETNSLTSIPSSALVNQRNT-LTNLNLGLNSINEVPVGALDFPVLSSL 239
Query: 191 DSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGN--PLSAADLSVALKPLTKLHRLSLRNC 248
SL+ + + P AF L+ LY++GN P A ++ + +T+L L +
Sbjct: 240 -SLEFNGITVIPP---QAFQGVPNLQFLYMTGNKFPSWAPEM---FRYITQLKTLGIGET 292
Query: 249 GLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLK 308
+S +P N F L L++S + ++ + + + L ++ F
Sbjct: 293 PISVIPNNAFMHIPNLIRLEMSEAAVDTIERGAFQRTPQIQAIVLNKNRLSQVRADFFEG 352
Query: 309 MTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYT-YP-DLEEL 366
+ L ++ L GN+++ ++ F NL +S L+++ L + VF ++ P D +
Sbjct: 353 LNDLYSIDLQGNRIDNVQPLGFANLPAISHLDISYNLLQTMPSNVFQNSFLPQPNDRRVI 412
Query: 367 RLSGNP 372
GNP
Sbjct: 413 YACGNP 418
Score = 187 (70.9 bits), Expect = 4.4e-11, P = 4.4e-11
Identities = 94/349 (26%), Positives = 151/349 (43%)
Query: 66 LNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDN--LNHLKTLELSQNK 123
++ L + + I F T L L+LNR L I AF+ L+ L L+L+ N
Sbjct: 61 IDSLTILDTAIPTIPANAFQSFTILR-LVLNRNTLQNIDDQAFNGPLLDSLIELDLNDNN 119
Query: 124 LKSHIDWTLV--LGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVA- 180
L I T + L NL KL R + +S+ N F + L L LA N L D +
Sbjct: 120 L-GQIPQTGIPRLRNLRKLYLNRNRINQLSSTAFNAFESRDLLLKLELAGNRLTDATLGD 178
Query: 181 TTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATK-LRTLYLSGNPLSAADLSVALKPLTK 239
T+ + L L L L L + A VN L L L N ++ + P+
Sbjct: 179 ATVFRPLTLLQELSLETNSLTS-IPSSALVNQRNTLTNLNLGLNSINEVPVGALDFPV-- 235
Query: 240 LHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQ 299
L LSL G++ +P F LQ L ++ N + + L+ L +G + +
Sbjct: 236 LSSLSLEFNGITVIPPQAFQGVPNLQFLYMTGNKFPSWAPEMFRYITQLKTLGIGETPIS 295
Query: 300 RISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHE-NY 358
I + F+ + +L L +S ++T+E G FQ + + LN L+++ F N
Sbjct: 296 VIPNNAFMHIPNLIRLEMSEAAVDTIERGAFQRTPQIQAIVLNKNRLSQVRADFFEGLND 355
Query: 359 TYP-DLEELRLSG-NPLHV--LPDSTK---QYSM-RTIPTQIWKNFDFL 399
Y DL+ R+ PL LP + Y++ +T+P+ +++N FL
Sbjct: 356 LYSIDLQGNRIDNVQPLGFANLPAISHLDISYNLLQTMPSNVFQN-SFL 403
Score = 123 (48.4 bits), Expect = 0.00041, P = 0.00041
Identities = 43/162 (26%), Positives = 76/162 (46%)
Query: 14 LDNPGLITINLNANPIQPVEG-AFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLS 72
LD P L +++L N I + AF +L +LYM P+ F +T L L +
Sbjct: 231 LDFPVLSSLSLEFNGITVIPPQAFQGVPNLQFLYMTGNKFPSWAPEMFRYITQLKTLGIG 290
Query: 73 GNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTL 132
P+ +I F + +L L ++ + I AF ++ + L++N+L S +
Sbjct: 291 ETPISVIPNNAFMHIPNLIRLEMSEAAVDTIERGAFQRTPQIQAIVLNKNRL-SQVRADF 349
Query: 133 VLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENEL 174
G L L ++DL+ + I N+ FAN + +L+++ N L
Sbjct: 350 FEG-LNDLYSIDLQGNRIDNVQPLGFANLPAISHLDISYNLL 390
>UNIPROTKB|F1MLJ7 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090288 "negative regulation of cellular response to
growth factor stimulus" evidence=IEA] [GO:0090260 "negative
regulation of retinal ganglion cell axon guidance" evidence=IEA]
[GO:0090024 "negative regulation of neutrophil chemotaxis"
evidence=IEA] [GO:0071676 "negative regulation of mononuclear cell
migration" evidence=IEA] [GO:0071672 "negative regulation of smooth
muscle cell chemotaxis" evidence=IEA] [GO:0071504 "cellular
response to heparin" evidence=IEA] [GO:0070100 "negative regulation
of chemokine-mediated signaling pathway" evidence=IEA] [GO:0061364
"apoptotic process involved in luteolysis" evidence=IEA]
[GO:0060763 "mammary duct terminal end bud growth" evidence=IEA]
[GO:0051414 "response to cortisol stimulus" evidence=IEA]
[GO:0051058 "negative regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0050929 "induction of negative
chemotaxis" evidence=IEA] [GO:0048846 "axon extension involved in
axon guidance" evidence=IEA] [GO:0048754 "branching morphogenesis
of an epithelial tube" evidence=IEA] [GO:0048495 "Roundabout
binding" evidence=IEA] [GO:0045499 "chemorepellent activity"
evidence=IEA] [GO:0043394 "proteoglycan binding" evidence=IEA]
[GO:0043237 "laminin-1 binding" evidence=IEA] [GO:0043116 "negative
regulation of vascular permeability" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0033563 "dorsal/ventral axon guidance" evidence=IEA]
[GO:0032870 "cellular response to hormone stimulus" evidence=IEA]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IEA]
[GO:0030837 "negative regulation of actin filament polymerization"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0021972 "corticospinal neuron axon guidance
through spinal cord" evidence=IEA] [GO:0021836 "chemorepulsion
involved in postnatal olfactory bulb interneuron migration"
evidence=IEA] [GO:0016337 "cell-cell adhesion" evidence=IEA]
[GO:0010629 "negative regulation of gene expression" evidence=IEA]
[GO:0010596 "negative regulation of endothelial cell migration"
evidence=IEA] [GO:0010593 "negative regulation of lamellipodium
assembly" evidence=IEA] [GO:0009986 "cell surface" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0008201 "heparin binding" evidence=IEA]
[GO:0008045 "motor neuron axon guidance" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005615 "extracellular space"
evidence=IEA] [GO:0005095 "GTPase inhibitor activity" evidence=IEA]
[GO:0002042 "cell migration involved in sprouting angiogenesis"
evidence=IEA] [GO:0001933 "negative regulation of protein
phosphorylation" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001657 "ureteric bud development"
evidence=IEA] [GO:0001656 "metanephros development" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005737 GO:GO:0008285 GO:GO:0005615 GO:GO:0009986
GO:GO:0030308 GO:GO:0001701 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0008201 GO:GO:0005509
GO:GO:0043116 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0043065 GO:GO:0008045 GO:GO:0071504
GO:GO:0005095 GO:GO:0016337 PROSITE:PS01186 GO:GO:0032870
GO:GO:0030837 GO:GO:0010629 InterPro:IPR003645 InterPro:IPR001791
Pfam:PF00054 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 GO:GO:0071672 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0001656 GO:GO:0010596 GO:GO:0001657
GO:GO:0001933 GO:GO:0048754 GO:GO:0071676 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
GO:GO:0048846 GO:GO:0060763 GO:GO:0070100 GO:GO:0090288
GO:GO:0033563 GO:GO:0045499 GO:GO:0002042 Pfam:PF01463
GO:GO:0010593 GO:GO:0051414 GeneTree:ENSGT00700000104083
GO:GO:0090260 GO:GO:0021836 GO:GO:0061364 GO:GO:0021972
GO:GO:0050929 GO:GO:0090024 GO:GO:0051058 OMA:RHKMFKG
EMBL:DAAA02017049 IPI:IPI00692425 Ensembl:ENSBTAT00000061059
NextBio:20876291 Uniprot:F1MLJ7
Length = 1532
Score = 195 (73.7 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
Identities = 79/329 (24%), Positives = 145/329 (44%)
Query: 17 PGLIT-INLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGN 74
P IT I L N I+ + GAF + L + + +S++ P F L +LN L L GN
Sbjct: 301 PETITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 360
Query: 75 PLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVL 134
+ + +F+ L SL+ L+LN + + AF +L++L L L NKL++ T
Sbjct: 361 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTF-- 418
Query: 135 GNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLD 194
L + T+ L Q+ P + WL + L N + T + L +
Sbjct: 419 SPLRAIQTMHLAQN-----PFICDCHLKWLADY-LHTNPIETSGARCTSPRRLANKRIGQ 472
Query: 195 LSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLP 254
+ + + E F+ T+ LSG+ ADL+ K + + N L+++P
Sbjct: 473 IKSKKFRCSAKEQYFIPGTEDYRSKLSGDCF--ADLACPEKCRCEGTTVDCSNQKLTKIP 530
Query: 255 ANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKT 314
+ ++T L+ + +++A T + L L ++ + + I F + +
Sbjct: 531 DH-IPQYTAELRLNNNEFTVLEA-TGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNE 588
Query: 315 LILSGNKLETLESGLFQNLTHLSVLELNN 343
++L+ N+LE ++ +F+ L L L L +
Sbjct: 589 ILLTSNRLENVQHKMFKGLESLKTLMLRS 617
Score = 192 (72.6 bits), Expect = 3.0e-14, Sum P(2) = 3.0e-14
Identities = 82/332 (24%), Positives = 132/332 (39%)
Query: 22 INLNANPIQPVEGAFLVARSLLY-LYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIE 80
+ LN N +Q + S LY L + E + I + F + L L N + IE
Sbjct: 108 LRLNRNHLQLFPELLFLGTSKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNHISCIE 167
Query: 81 PGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKL--KSHI----DWTLVL 134
G F L LE L LN N+T +S ++F+++ L+T L N L H+ DW
Sbjct: 168 DGAFRALRDLEVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQR 227
Query: 135 GNLGK----LDTLDLRQSGISNLPDNVFANNTWLRNLNLA-ENELIDLDVATTLGQNLVH 189
+G + LR ++ + F + A + ++ A T N+V
Sbjct: 228 PRVGLYTQCMGPSHLRGHNVAEVQKREFVCSGGTSGKEPACQCSVLHCPAACTCSNNIV- 286
Query: 190 LDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCG 249
+C KG L+E + + L N + A P KL R+ L N
Sbjct: 287 -------DCRGKG-LTEIPTNLPETITEIRLEQNSIKVIPPG-AFSPYKKLRRIDLSNNQ 337
Query: 250 LSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKM 309
+S L + F L L + N + + +L L SL+ L + + + + F +
Sbjct: 338 ISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDL 397
Query: 310 TSLKTLILSGNKLETLESGLFQNLTHLSVLEL 341
+L L L NKL+T+ G F L + + L
Sbjct: 398 HNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHL 429
Score = 179 (68.1 bits), Expect = 7.5e-13, Sum P(2) = 7.5e-13
Identities = 97/381 (25%), Positives = 151/381 (39%)
Query: 22 INLNANPIQPVEGA-FLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIE 80
++LN N I + F R L L + E ++ I F +L L +L L+ N L++
Sbjct: 60 LDLNGNNITRITKTDFAGLRHLRVLQLMENKITTIERGAFQDLKELERLRLNRNHLQLFP 119
Query: 81 PGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKL 140
+F + L L L+ + I AF +K L+L N + D L L
Sbjct: 120 ELLFLGTSKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNHISCIEDGAFRA--LRDL 177
Query: 141 DTLDLRQSGISNLPDNVFANNTWLRNLNLAENELI-DLDVATT---LGQN-LVHLDSLDL 195
+ L L + I+ L F + LR L N L D +A L Q V L + +
Sbjct: 178 EVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCM 237
Query: 196 SNCHLKGPLSEDAFVNATKLRTLYLSGNPLS---AADLSVALKPLTKLHRLSLRNC---G 249
HL+G V + R SG A SV P ++ +C G
Sbjct: 238 GPSHLRGHN-----VAEVQKREFVCSGGTSGKEPACQCSVLHCPAACTCSNNIVDCRGKG 292
Query: 250 LSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKM 309
L+ +P N T E+ + N + SP + L +D+ + + ++ F +
Sbjct: 293 LTEIPTNLPETIT---EIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGL 349
Query: 310 TSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLS 369
SL +L+L GNK+ L LF+ L L +L LN + L F + + +L L L
Sbjct: 350 RSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLH---NLNLLSLY 406
Query: 370 GNPLHVLPDSTKQYSMRTIPT 390
N L + T +R I T
Sbjct: 407 DNKLQTIAKGTFS-PLRAIQT 426
Score = 162 (62.1 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 82/322 (25%), Positives = 129/322 (40%)
Query: 60 FTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLEL 119
F L L K++ S N + IE G F+ + + ++L L + F L LKTL L
Sbjct: 556 FKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLML 615
Query: 120 SQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDV 179
N++ S + +G L + L L + I+ + F L LNL N
Sbjct: 616 RSNRI-SCVGNDSFIG-LSSVRLLSLYDNQITTIAPGAFDTLHSLSTLNLLANPFNCNCY 673
Query: 180 ATTLGQNLVHLDSLDLSNCHLKGP-LSEDAFVNATKLRTLYLS-GNP-LSAADLSVALKP 236
LG+ L + N + P ++ + ++ GN S + LS
Sbjct: 674 LAWLGEWL-RKKRIVTGNPRCQKPYFLKEIPIQDVAIQDFTCDDGNDDNSCSPLSRCPAE 732
Query: 237 LTKLHRL-SLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHL---D 292
T L + N L LP T EL + N FT + L + +HL D
Sbjct: 733 CTCLDTVVRCSNKALKVLPKGIPRDVT---ELYLDGNQ----FTLVPKELSNYKHLTLID 785
Query: 293 MGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNET 352
+ + + +S +F MT L TLILS N+L + F L L +L L+ ++ + E
Sbjct: 786 LSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEG 845
Query: 353 VFHENYTYPDLEELRLSGNPLH 374
F++ L L + NPL+
Sbjct: 846 AFND---LAALSHLAIGANPLY 864
Score = 140 (54.3 bits), Expect = 2.2e-13, Sum P(3) = 2.2e-13
Identities = 51/158 (32%), Positives = 76/158 (48%)
Query: 68 KLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSH 127
+LDL+GN + I F L L L L +T I AF +L L+ L L++N L+
Sbjct: 59 RLDLNGNNITRITKTDFAGLRHLRVLQLMENKITTIERGAFQDLKELERLRLNRNHLQLF 118
Query: 128 IDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNL 187
+ L LG KL LDL ++ I +P F ++NL L N + ++ + L
Sbjct: 119 PE-LLFLGT-SKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNHISCIEDGAF--RAL 174
Query: 188 VHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPL 225
L+ L L+N ++ LS +F + KLRT L N L
Sbjct: 175 RDLEVLTLNNNNITR-LSVASFNHMPKLRTFRLHSNNL 211
Score = 134 (52.2 bits), Expect = 6.8e-06, Sum P(2) = 6.8e-06
Identities = 78/318 (24%), Positives = 134/318 (42%)
Query: 61 TNLT-TLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLEL 119
TNL T+ ++ L N +++I PG F P L + L+ ++ ++P AF L L +L L
Sbjct: 298 TNLPETITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVL 357
Query: 120 SQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDV 179
NK+ + + +L G L L L L + I+ L + F + L NLNL L D +
Sbjct: 358 YGNKI-TELPKSLFEG-LFSLQLLLLNANKINCLRVDAFQD---LHNLNLLS--LYDNKL 410
Query: 180 ATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTL--YLSGNPLSAADLSVALKPL 237
T L ++ HL +++ F+ L+ L YL NP+ + P
Sbjct: 411 QTIAKGTFSPLRAIQ--TMHL----AQNPFICDCHLKWLADYLHTNPIETSGARCT-SP- 462
Query: 238 TKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLES-LEHLDMGYS 296
+L + + + ++ D D F L P + E + S
Sbjct: 463 RRLANKRIGQIKSKKFRCSAKEQYFIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCS 522
Query: 297 NLQRISRSTFLKMTSLKTLILSGNKLETLES-GLFQNLTHLSVLELNNCGLTRLNETVFH 355
N Q++++ L L+ N+ LE+ G+F+ L L + +N +T + E F
Sbjct: 523 N-QKLTKIPDHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAF- 580
Query: 356 ENYTYPDLEELRLSGNPL 373
E + + E+ L+ N L
Sbjct: 581 EGAS--GVNEILLTSNRL 596
Score = 122 (48.0 bits), Expect = 8.9e-07, Sum P(2) = 8.9e-07
Identities = 51/183 (27%), Positives = 88/183 (48%)
Query: 69 LDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHI 128
+D G LR + + P + E L LN N+T I+ + F L HL+ L+L +NK+ + I
Sbjct: 39 VDCHGLALRSVPRNI--PRNT-ERLDLNGNNITRITKTDFAGLRHLRVLQLMENKITT-I 94
Query: 129 DWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLV 188
+ +L +L+ L L ++ + P+ +F + L L+L+EN++ + G V
Sbjct: 95 ERG-AFQDLKELERLRLNRNHLQLFPELLFLGTSKLYRLDLSENQIQAIPRKAFRGA--V 151
Query: 189 HLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVA-LKPLTKLHRLSLRN 247
+ +L L H+ + + AF L L L+ N ++ LSVA + KL L +
Sbjct: 152 DIKNLQLDYNHISC-IEDGAFRALRDLEVLTLNNNNITR--LSVASFNHMPKLRTFRLHS 208
Query: 248 CGL 250
L
Sbjct: 209 NNL 211
Score = 116 (45.9 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 35/107 (32%), Positives = 50/107 (46%)
Query: 17 PGLITINLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNP 75
P L IN + N I +E GAF A + + + L + + F L +L L L N
Sbjct: 560 PQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNR 619
Query: 76 LRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQN 122
+ + F L+S+ L L +T I+P AFD L+ L TL L N
Sbjct: 620 ISCVGNDSFIGLSSVRLLSLYDNQITTIAPGAFDTLHSLSTLNLLAN 666
Score = 114 (45.2 bits), Expect = 2.2e-13, Sum P(3) = 2.2e-13
Identities = 35/140 (25%), Positives = 67/140 (47%)
Query: 218 LYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDA 277
L L+ N + + + K L +L +++ N ++ + F + + E+ ++ N L +
Sbjct: 540 LRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENV 599
Query: 278 FTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLS 337
+ LESL+ L + + + + +F+ ++S++ L L N++ T+ G F L LS
Sbjct: 600 QHKMFKGLESLKTLMLRSNRISCVGNDSFIGLSSVRLLSLYDNQITTIAPGAFDTLHSLS 659
Query: 338 VLEL--N----NCGLTRLNE 351
L L N NC L L E
Sbjct: 660 TLNLLANPFNCNCYLAWLGE 679
Score = 114 (45.2 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 31/89 (34%), Positives = 45/89 (50%)
Query: 289 EHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTR 348
E LD+ +N+ RI+++ F + L+ L L NK+ T+E G FQ+L L L LN L
Sbjct: 58 ERLDLNGNNITRITKTDFAGLRHLRVLQLMENKITTIERGAFQDLKELERLRLNRNHLQL 117
Query: 349 LNETVFHENYTYPDLEELRLSGNPLHVLP 377
E +F L L LS N + +P
Sbjct: 118 FPELLFLGT---SKLYRLDLSENQIQAIP 143
Score = 83 (34.3 bits), Expect = 3.0e-14, Sum P(2) = 3.0e-14
Identities = 36/180 (20%), Positives = 70/180 (38%)
Query: 369 SGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNET-VFHENYTYPDLEELRLSGN 427
S L +PD QY T ++ N +F V L T +F + P L ++ S N
Sbjct: 522 SNQKLTKIPDHIPQY---TAELRL-NNNEFTV----LEATGIFKK---LPQLRKINFSNN 570
Query: 428 PLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSF 487
+ + G +++ + +F ++ +L L +N +S SF
Sbjct: 571 KITDIEEGAFEGASGVNEILLTSN--RLENVQHKMFKGLESLKTLMLRSNRISCVGNDSF 628
Query: 488 QFXXXXXXXXXXXXXXXXXTHISPTVLRHNRAITSIKLVGNPWKCDCNIADMWEWATREK 547
T I+P +++++ L+ NP+ C+C +A + EW +++
Sbjct: 629 ---IGLSSVRLLSLYDNQITTIAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKR 685
Score = 62 (26.9 bits), Expect = 2.2e-13, Sum P(3) = 2.2e-13
Identities = 26/135 (19%), Positives = 46/135 (34%)
Query: 418 DLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANN 477
D+ EL L GN ++P +I L F+N + +L L+ N
Sbjct: 757 DVTELYLDGNQFTLVPK---ELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 813
Query: 478 NLSMTSELSFQFXXXXXXXXXXXXXXXXXTHISPTVLRHNRAITSIKLVGNPWKCDCNIA 537
L +F + + A++ + + NP CDCN+
Sbjct: 814 RLRCIPPRTFD---GLKSLRLLSLHGNDISVVPEGAFNDLAALSHLAIGANPLYCDCNMQ 870
Query: 538 DMWEWATREKGDIGV 552
+ +W E + G+
Sbjct: 871 WLSDWVKSEYKEPGI 885
Score = 56 (24.8 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 17/70 (24%), Positives = 29/70 (41%)
Query: 419 LEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNN 478
+ E+RL N + V+P G +I L P+ F R++ SL L N
Sbjct: 304 ITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNN--QISELAPDAFQGLRSLNSLVLYGNK 361
Query: 479 LSMTSELSFQ 488
++ + F+
Sbjct: 362 ITELPKSLFE 371
Score = 53 (23.7 bits), Expect = 3.9e-11, Sum P(2) = 3.9e-11
Identities = 9/19 (47%), Positives = 14/19 (73%)
Query: 518 RAITSIKLVGNPWKCDCNI 536
RAI ++ L NP+ CDC++
Sbjct: 422 RAIQTMHLAQNPFICDCHL 440
>RGD|69311 [details] [associations]
symbol:Slit3 "slit homolog 3 (Drosophila)" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005615 "extracellular
space" evidence=IEA;ISO] [GO:0007411 "axon guidance" evidence=ISO]
[GO:0007420 "brain development" evidence=IEP] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA;ISO] [GO:0009887
"organ morphogenesis" evidence=IEA;ISO] [GO:0010629 "negative
regulation of gene expression" evidence=IEA;ISO] [GO:0016020
"membrane" evidence=IDA] [GO:0021510 "spinal cord development"
evidence=IEP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA;ISO]
[GO:0032870 "cellular response to hormone stimulus"
evidence=IEA;ISO] [GO:0035385 "Roundabout signaling pathway"
evidence=IEA;ISO] [GO:0048495 "Roundabout binding" evidence=IEA;ISO]
[GO:0048846 "axon extension involved in axon guidance"
evidence=IEA;ISO] [GO:0050919 "negative chemotaxis"
evidence=IEA;ISO] [GO:0051414 "response to cortisol stimulus"
evidence=IEA;ISO] [GO:0061364 "apoptotic process involved in
luteolysis" evidence=IEA;ISO] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IEA;ISO] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0021834 "chemorepulsion involved
in embryonic olfactory bulb interneuron precursor migration"
evidence=ISO] InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 RGD:69311 GO:GO:0008285 GO:GO:0005615
GO:GO:0007420 GO:GO:0016020 GO:GO:0030308 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887
PROSITE:PS01186 GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791
SMART:SM00282 PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
GO:GO:0070100 Pfam:PF12661 Pfam:PF01463 GO:GO:0051414 GO:GO:0050919
GO:GO:0035385 GO:GO:0061364 HOGENOM:HOG000116120 HOVERGEN:HBG057959
OrthoDB:EOG4D7Z4T CTD:6586 KO:K06850 EMBL:AB011531 IPI:IPI00207574
PIR:T13953 RefSeq:NP_112611.1 UniGene:Rn.12298
ProteinModelPortal:O88280 SMR:O88280 IntAct:O88280 STRING:O88280
PRIDE:O88280 GeneID:83467 KEGG:rno:83467 UCSC:RGD:69311
InParanoid:O88280 NextBio:615863 ArrayExpress:O88280
Genevestigator:O88280 GermOnline:ENSRNOG00000007377 Uniprot:O88280
Length = 1523
Score = 203 (76.5 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 94/366 (25%), Positives = 159/366 (43%)
Query: 19 LITINLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLR 77
L ++L N + +E GAF + L L + + L + F + L +LDLS N ++
Sbjct: 87 LRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDLSENQIQ 146
Query: 78 IIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNL 137
I F +T ++ L L+ +++ I AF L L+ L L+ N + S I T ++
Sbjct: 147 GIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNI-SRILVTS-FNHM 204
Query: 138 GKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSN 197
K+ TL L + + D A WL + L + I TL VHL +++
Sbjct: 205 PKIRTLRLHSNHL--YCDCHLA---WLSDW-LRQRRTIG---QFTLCMAPVHLRGFSVAD 255
Query: 198 CHLK-----GPLSEDAFVNATKLR---TLYLSGNPLSAADLSVALKPLTK---LHRLSLR 246
K GP SE NA L S N + + P + + L
Sbjct: 256 VQKKEYVCPGPHSEAPACNANSLSCPSACSCSNNIVDCRGKGLTEIPANLPEGIVEIRLE 315
Query: 247 NCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTF 306
+ +PA F ++ L+ +DIS N + D L+SL L + + + I + F
Sbjct: 316 QNSIKSIPAGAFIQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIPKGLF 375
Query: 307 LKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEEL 366
+ SL+ L+L+ NK+ L FQ+L +L++L L + L +++ +F ++ L
Sbjct: 376 DGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAP---LQSIQTL 432
Query: 367 RLSGNP 372
L+ NP
Sbjct: 433 HLAQNP 438
Score = 188 (71.2 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 86/319 (26%), Positives = 132/319 (41%)
Query: 60 FTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLEL 119
F L L K++LS N ++ + G FD ++ LML L + F L+ LKTL L
Sbjct: 553 FKKLPNLRKINLSNNRIKEVREGAFDGAAGVQELMLTGNQLETMHGRMFRGLSGLKTLML 612
Query: 120 SQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENEL-IDLD 178
N L S ++ G L + L L + I+ + F L +NL N +
Sbjct: 613 RSN-LISCVNNDTFAG-LSSVRLLSLYDNRITTISPGAFTTLVSLSTINLLSNPFNCNCH 670
Query: 179 VATTLGQNLVHLDSLDLSNCHLKGPLS-EDAFVNATKLRTLYLSGNPLSAADLSVALKPL 237
+A LG+ L + N + P ++ + ++ GN ++ LS
Sbjct: 671 MAW-LGRWL-RKRRIVSGNPRCQKPFFLKEIPIQDVAIQDFTCEGNEENSCQLSPRCPEQ 728
Query: 238 TKLHRLSLR--NCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGY 295
+R N GL LP T EL + N L A LS L +D+
Sbjct: 729 CTCVETVVRCSNRGLHTLPKGMPKDVT---ELYLEGNHLT-AVPKELSTFRQLTLIDLSN 784
Query: 296 SNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFH 355
+++ ++ TF M+ L TLILS N+L + F L L VL L+ ++ + E F+
Sbjct: 785 NSISMLTNHTFSNMSHLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFN 844
Query: 356 ENYTYPDLEELRLSGNPLH 374
+ L L L NPLH
Sbjct: 845 D---LTSLSHLALGINPLH 860
Score = 173 (66.0 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 74/323 (22%), Positives = 143/323 (44%)
Query: 42 LLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLT 101
++ + +++ ++ I F L ++D+S N + I P F L SL L+L +T
Sbjct: 309 IVEIRLEQNSIKSIPAGAFIQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKIT 368
Query: 102 YISPSAFDNLNHLKTLELSQNKLKS-HIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFAN 160
I FD L L+ L L+ NK+ ++ L NL L D + IS +FA
Sbjct: 369 EIPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISK---GLFAP 425
Query: 161 NTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLS-EDAFVNATKLRTLY 219
++ L+LA+N + D + + + ++ S P + ++ K +
Sbjct: 426 LQSIQTLHLAQNPFV-CDCHLKWLADYLQDNPIETSGARCSSPRRLANKRISQIKSKKFR 484
Query: 220 LSG-----NPLSAA---DLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISH 271
SG N S+ DL K + + N LSR+P++ +T L+ +
Sbjct: 485 CSGSEDYRNRFSSECFMDLVCPEKCRCEGTIVDCSNQKLSRIPSH-LPEYTTDLRLNDND 543
Query: 272 NPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQ 331
+++A T + L +L +++ + ++ + F ++ L+L+GN+LET+ +F+
Sbjct: 544 IAVLEA-TGIFKKLPNLRKINLSNNRIKEVREGAFDGAAGVQELMLTGNQLETMHGRMFR 602
Query: 332 NLTHLSVLELNNCGLTRLNETVF 354
L+ L L L + ++ +N F
Sbjct: 603 GLSGLKTLMLRSNLISCVNNDTF 625
Score = 158 (60.7 bits), Expect = 7.9e-08, Sum P(2) = 7.9e-08
Identities = 89/357 (24%), Positives = 150/357 (42%)
Query: 38 VARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNR 97
+ R+ L + +++I FT L L L L N + +IE G F L LE L LN+
Sbjct: 59 IPRNAERLDLDRNNITRITKMDFTGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNK 118
Query: 98 CNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNV 157
L + F + L L+LS+N+++ I G G + L L + IS + D
Sbjct: 119 NKLQVLPELLFQSTPKLTRLDLSENQIQG-IPRKAFRGVTG-VKNLQLDNNHISCIEDGA 176
Query: 158 FANNTWLRNLNLAENELIDLDVATTLGQ----NLVHLDSLDL-SNCHLKGPLSEDAFVNA 212
F L L L N + + + T+ + L S L +CHL LS D
Sbjct: 177 FRALRDLEILTLNNNNISRI-LVTSFNHMPKIRTLRLHSNHLYCDCHLAW-LS-DWLRQR 233
Query: 213 TKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNC-GL-SRLPANTFHRFTCLQELDIS 270
+ L P+ SVA + K + C G S PA + +C S
Sbjct: 234 RTIGQFTLCMAPVHLRGFSVA--DVQKKEYV----CPGPHSEAPACNANSLSCPSACSCS 287
Query: 271 HNPLIDA----FTALLSPL-ESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETL 325
+N ++D T + + L E + + + ++++ I F++ LK + +S N++ +
Sbjct: 288 NN-IVDCRGKGLTEIPANLPEGIVEIRLEQNSIKSIPAGAFIQYKKLKRIDISKNQISDI 346
Query: 326 ESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQ 382
FQ L L+ L L +T + + +F + L+ L L+ N ++ L +T Q
Sbjct: 347 APDAFQGLKSLTSLVLYGNKITEIPKGLFDGLVS---LQLLLLNANKINCLRVNTFQ 400
Score = 155 (59.6 bits), Expect = 3.2e-14, Sum P(2) = 3.2e-14
Identities = 44/132 (33%), Positives = 68/132 (51%)
Query: 18 GLITINLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPL 76
G++ I L N I+ + GAF+ + L + + + +S I P F L +L L L GN +
Sbjct: 308 GIVEIRLEQNSIKSIPAGAFIQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKI 367
Query: 77 RIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGN 136
I G+FD L SL+ L+LN + + + F +L +L L L NKL++ I L
Sbjct: 368 TEIPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQT-ISKGL-FAP 425
Query: 137 LGKLDTLDLRQS 148
L + TL L Q+
Sbjct: 426 LQSIQTLHLAQN 437
Score = 151 (58.2 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 89/347 (25%), Positives = 157/347 (45%)
Query: 49 ECTLSKIN--PQFFTNLTTLNKLDLSGNPLRIIEP-GVFDPLTSLEYLMLNRCNLTYISP 105
+C+ K++ P TT L L+ N + ++E G+F L +L + L+ + +
Sbjct: 517 DCSNQKLSRIPSHLPEYTT--DLRLNDNDIAVLEATGIFKKLPNLRKINLSNNRIKEVRE 574
Query: 106 SAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLR 165
AFD ++ L L+ N+L++ + + G L L TL LR + IS + ++ FA + +R
Sbjct: 575 GAFDGAAGVQELMLTGNQLET-MHGRMFRG-LSGLKTLMLRSNLISCVNNDTFAGLSSVR 632
Query: 166 NLNLAENELIDLDVA--TTL-GQNLVHLDSLDLS-NCHLK--GP-LSEDAFV--NATKLR 216
L+L +N + + TTL + ++L S + NCH+ G L + V N +
Sbjct: 633 LLSLYDNRITTISPGAFTTLVSLSTINLLSNPFNCNCHMAWLGRWLRKRRIVSGNPRCQK 692
Query: 217 TLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLS-RLPANTFHRFTCLQELDISHNPLI 275
+L P+ VA++ T +C LS R P + TC++ + N +
Sbjct: 693 PFFLKEIPIQ----DVAIQDFT-CEGNEENSCQLSPRCP----EQCTCVETVVRCSNRGL 743
Query: 276 DAFTALLSPLESLEHLDMGYSNLQRISR--STFLKMTSLKTLILSGNKLETLESGLFQNL 333
+ P + E L + ++L + + STF ++T + LS N + L + F N+
Sbjct: 744 HTLPKGM-PKDVTE-LYLEGNHLTAVPKELSTFRQLTLID---LSNNSISMLTNHTFSNM 798
Query: 334 THLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDST 380
+HLS L L+ RL H L L L GN + +P+ +
Sbjct: 799 SHLSTLILS---YNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGS 842
Score = 121 (47.7 bits), Expect = 3.2e-14, Sum P(2) = 3.2e-14
Identities = 63/275 (22%), Positives = 109/275 (39%)
Query: 218 LYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDA 277
L L+ N ++ + + K L L +++L N + + F +QEL ++ N L
Sbjct: 537 LRLNDNDIAVLEATGIFKKLPNLRKINLSNNRIKEVREGAFDGAAGVQELMLTGNQLETM 596
Query: 278 FTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLS 337
+ L L+ L + + + ++ TF ++S++ L L N++ T+ G F L LS
Sbjct: 597 HGRMFRGLSGLKTLMLRSNLISCVNNDTFAGLSSVRLLSLYDNRITTISPGAFTTLVSLS 656
Query: 338 VLELNNCGLTRLNETVFHENYTYPDLEELRL-SGNPLHVLPDSTKQYSMRTIPTQIWKNF 396
+ L L+ H + L + R+ SGNP K + ++ IP Q
Sbjct: 657 TINL----LSNPFNCNCHMAWLGRWLRKRRIVSGNPR-----CQKPFFLKEIPIQDVAIQ 707
Query: 397 DFLVILFILNETVFH----ENYTYPDLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXX 452
DF N E T + +R S LH LP G
Sbjct: 708 DFTCEGNEENSCQLSPRCPEQCTCVETV-VRCSNRGLHTLPKGMPKDVTELYLEGNHLTA 766
Query: 453 CKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSF 487
P + R +T ++L+NN++SM + +F
Sbjct: 767 V------PKELSTFRQLTLIDLSNNSISMLTNHTF 795
Score = 121 (47.7 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 39/117 (33%), Positives = 54/117 (46%)
Query: 17 PGLITINLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNP 75
P L INL+ N I+ V EGAF A + L + L ++ + F L+ L L L N
Sbjct: 557 PNLRKINLSNNRIKEVREGAFDGAAGVQELMLTGNQLETMHGRMFRGLSGLKTLMLRSNL 616
Query: 76 LRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKS--HIDW 130
+ + F L+S+ L L +T ISP AF L L T+ L N H+ W
Sbjct: 617 ISCVNNDTFAGLSSVRLLSLYDNRITTISPGAFTTLVSLSTINLLSNPFNCNCHMAW 673
Score = 81 (33.6 bits), Expect = 4.4e-10, Sum P(2) = 4.4e-10
Identities = 49/162 (30%), Positives = 68/162 (41%)
Query: 134 LGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSL 193
L +L +DL + IS L ++ F+N + L L L+ N L + V G L L L
Sbjct: 771 LSTFRQLTLIDLSNNSISMLTNHTFSNMSHLSTLILSYNRLRCIPVHAFNG--LRSLRVL 828
Query: 194 DLSNCHLKGPLSEDAFVNATKLRTLYLSGNPL----SAADLSVALKPLTK---LHRLSLR 246
L + + E +F + T L L L NPL S LS +K K + R S
Sbjct: 829 TLHGNDISS-VPEGSFNDLTSLSHLALGINPLHCDCSLRWLSEWIKAGYKEPGIARCSSP 887
Query: 247 NCGLSRLPANT-FHRFTCLQELDISHNPLIDAFTALLSPLES 287
RL T HRF C +DI N + L SP ++
Sbjct: 888 ESMADRLLLTTPTHRFQCKGPVDI--NIVAKCNACLSSPCKN 927
Score = 56 (24.8 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 27/125 (21%), Positives = 44/125 (35%)
Query: 418 DLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANN 477
D+ EL L GN L +P I L + F+N ++++L L+ N
Sbjct: 753 DVTELYLEGNHLTAVPK---ELSTFRQLTLIDLSNNSISMLTNHTFSNMSHLSTLILSYN 809
Query: 478 NLSMTSELSFQFXXXXXXXXXXXXXXXXXTHISPTVLRHNRAITSIKLVGNPWKCDCNIA 537
L +F S L +++ + L NP CDC++
Sbjct: 810 RLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLT---SLSHLALGINPLHCDCSLR 866
Query: 538 DMWEW 542
+ EW
Sbjct: 867 WLSEW 871
>UNIPROTKB|O88280 [details] [associations]
symbol:Slit3 "Slit homolog 3 protein" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
RGD:69311 GO:GO:0008285 GO:GO:0005615 GO:GO:0007420 GO:GO:0016020
GO:GO:0030308 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887 PROSITE:PS01186
GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791 SMART:SM00282
PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 GO:GO:0048846 GO:GO:0070100 Pfam:PF12661
Pfam:PF01463 GO:GO:0051414 GO:GO:0050919 GO:GO:0035385
GO:GO:0061364 HOGENOM:HOG000116120 HOVERGEN:HBG057959
OrthoDB:EOG4D7Z4T CTD:6586 KO:K06850 EMBL:AB011531 IPI:IPI00207574
PIR:T13953 RefSeq:NP_112611.1 UniGene:Rn.12298
ProteinModelPortal:O88280 SMR:O88280 IntAct:O88280 STRING:O88280
PRIDE:O88280 GeneID:83467 KEGG:rno:83467 UCSC:RGD:69311
InParanoid:O88280 NextBio:615863 ArrayExpress:O88280
Genevestigator:O88280 GermOnline:ENSRNOG00000007377 Uniprot:O88280
Length = 1523
Score = 203 (76.5 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 94/366 (25%), Positives = 159/366 (43%)
Query: 19 LITINLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLR 77
L ++L N + +E GAF + L L + + L + F + L +LDLS N ++
Sbjct: 87 LRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDLSENQIQ 146
Query: 78 IIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNL 137
I F +T ++ L L+ +++ I AF L L+ L L+ N + S I T ++
Sbjct: 147 GIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNI-SRILVTS-FNHM 204
Query: 138 GKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSN 197
K+ TL L + + D A WL + L + I TL VHL +++
Sbjct: 205 PKIRTLRLHSNHL--YCDCHLA---WLSDW-LRQRRTIG---QFTLCMAPVHLRGFSVAD 255
Query: 198 CHLK-----GPLSEDAFVNATKLR---TLYLSGNPLSAADLSVALKPLTK---LHRLSLR 246
K GP SE NA L S N + + P + + L
Sbjct: 256 VQKKEYVCPGPHSEAPACNANSLSCPSACSCSNNIVDCRGKGLTEIPANLPEGIVEIRLE 315
Query: 247 NCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTF 306
+ +PA F ++ L+ +DIS N + D L+SL L + + + I + F
Sbjct: 316 QNSIKSIPAGAFIQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIPKGLF 375
Query: 307 LKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEEL 366
+ SL+ L+L+ NK+ L FQ+L +L++L L + L +++ +F ++ L
Sbjct: 376 DGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAP---LQSIQTL 432
Query: 367 RLSGNP 372
L+ NP
Sbjct: 433 HLAQNP 438
Score = 188 (71.2 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 86/319 (26%), Positives = 132/319 (41%)
Query: 60 FTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLEL 119
F L L K++LS N ++ + G FD ++ LML L + F L+ LKTL L
Sbjct: 553 FKKLPNLRKINLSNNRIKEVREGAFDGAAGVQELMLTGNQLETMHGRMFRGLSGLKTLML 612
Query: 120 SQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENEL-IDLD 178
N L S ++ G L + L L + I+ + F L +NL N +
Sbjct: 613 RSN-LISCVNNDTFAG-LSSVRLLSLYDNRITTISPGAFTTLVSLSTINLLSNPFNCNCH 670
Query: 179 VATTLGQNLVHLDSLDLSNCHLKGPLS-EDAFVNATKLRTLYLSGNPLSAADLSVALKPL 237
+A LG+ L + N + P ++ + ++ GN ++ LS
Sbjct: 671 MAW-LGRWL-RKRRIVSGNPRCQKPFFLKEIPIQDVAIQDFTCEGNEENSCQLSPRCPEQ 728
Query: 238 TKLHRLSLR--NCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGY 295
+R N GL LP T EL + N L A LS L +D+
Sbjct: 729 CTCVETVVRCSNRGLHTLPKGMPKDVT---ELYLEGNHLT-AVPKELSTFRQLTLIDLSN 784
Query: 296 SNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFH 355
+++ ++ TF M+ L TLILS N+L + F L L VL L+ ++ + E F+
Sbjct: 785 NSISMLTNHTFSNMSHLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFN 844
Query: 356 ENYTYPDLEELRLSGNPLH 374
+ L L L NPLH
Sbjct: 845 D---LTSLSHLALGINPLH 860
Score = 173 (66.0 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 74/323 (22%), Positives = 143/323 (44%)
Query: 42 LLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLT 101
++ + +++ ++ I F L ++D+S N + I P F L SL L+L +T
Sbjct: 309 IVEIRLEQNSIKSIPAGAFIQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKIT 368
Query: 102 YISPSAFDNLNHLKTLELSQNKLKS-HIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFAN 160
I FD L L+ L L+ NK+ ++ L NL L D + IS +FA
Sbjct: 369 EIPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISK---GLFAP 425
Query: 161 NTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLS-EDAFVNATKLRTLY 219
++ L+LA+N + D + + + ++ S P + ++ K +
Sbjct: 426 LQSIQTLHLAQNPFV-CDCHLKWLADYLQDNPIETSGARCSSPRRLANKRISQIKSKKFR 484
Query: 220 LSG-----NPLSAA---DLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISH 271
SG N S+ DL K + + N LSR+P++ +T L+ +
Sbjct: 485 CSGSEDYRNRFSSECFMDLVCPEKCRCEGTIVDCSNQKLSRIPSH-LPEYTTDLRLNDND 543
Query: 272 NPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQ 331
+++A T + L +L +++ + ++ + F ++ L+L+GN+LET+ +F+
Sbjct: 544 IAVLEA-TGIFKKLPNLRKINLSNNRIKEVREGAFDGAAGVQELMLTGNQLETMHGRMFR 602
Query: 332 NLTHLSVLELNNCGLTRLNETVF 354
L+ L L L + ++ +N F
Sbjct: 603 GLSGLKTLMLRSNLISCVNNDTF 625
Score = 158 (60.7 bits), Expect = 7.9e-08, Sum P(2) = 7.9e-08
Identities = 89/357 (24%), Positives = 150/357 (42%)
Query: 38 VARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNR 97
+ R+ L + +++I FT L L L L N + +IE G F L LE L LN+
Sbjct: 59 IPRNAERLDLDRNNITRITKMDFTGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNK 118
Query: 98 CNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNV 157
L + F + L L+LS+N+++ I G G + L L + IS + D
Sbjct: 119 NKLQVLPELLFQSTPKLTRLDLSENQIQG-IPRKAFRGVTG-VKNLQLDNNHISCIEDGA 176
Query: 158 FANNTWLRNLNLAENELIDLDVATTLGQ----NLVHLDSLDL-SNCHLKGPLSEDAFVNA 212
F L L L N + + + T+ + L S L +CHL LS D
Sbjct: 177 FRALRDLEILTLNNNNISRI-LVTSFNHMPKIRTLRLHSNHLYCDCHLAW-LS-DWLRQR 233
Query: 213 TKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNC-GL-SRLPANTFHRFTCLQELDIS 270
+ L P+ SVA + K + C G S PA + +C S
Sbjct: 234 RTIGQFTLCMAPVHLRGFSVA--DVQKKEYV----CPGPHSEAPACNANSLSCPSACSCS 287
Query: 271 HNPLIDA----FTALLSPL-ESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETL 325
+N ++D T + + L E + + + ++++ I F++ LK + +S N++ +
Sbjct: 288 NN-IVDCRGKGLTEIPANLPEGIVEIRLEQNSIKSIPAGAFIQYKKLKRIDISKNQISDI 346
Query: 326 ESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQ 382
FQ L L+ L L +T + + +F + L+ L L+ N ++ L +T Q
Sbjct: 347 APDAFQGLKSLTSLVLYGNKITEIPKGLFDGLVS---LQLLLLNANKINCLRVNTFQ 400
Score = 155 (59.6 bits), Expect = 3.2e-14, Sum P(2) = 3.2e-14
Identities = 44/132 (33%), Positives = 68/132 (51%)
Query: 18 GLITINLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPL 76
G++ I L N I+ + GAF+ + L + + + +S I P F L +L L L GN +
Sbjct: 308 GIVEIRLEQNSIKSIPAGAFIQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKI 367
Query: 77 RIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGN 136
I G+FD L SL+ L+LN + + + F +L +L L L NKL++ I L
Sbjct: 368 TEIPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQT-ISKGL-FAP 425
Query: 137 LGKLDTLDLRQS 148
L + TL L Q+
Sbjct: 426 LQSIQTLHLAQN 437
Score = 151 (58.2 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 89/347 (25%), Positives = 157/347 (45%)
Query: 49 ECTLSKIN--PQFFTNLTTLNKLDLSGNPLRIIEP-GVFDPLTSLEYLMLNRCNLTYISP 105
+C+ K++ P TT L L+ N + ++E G+F L +L + L+ + +
Sbjct: 517 DCSNQKLSRIPSHLPEYTT--DLRLNDNDIAVLEATGIFKKLPNLRKINLSNNRIKEVRE 574
Query: 106 SAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLR 165
AFD ++ L L+ N+L++ + + G L L TL LR + IS + ++ FA + +R
Sbjct: 575 GAFDGAAGVQELMLTGNQLET-MHGRMFRG-LSGLKTLMLRSNLISCVNNDTFAGLSSVR 632
Query: 166 NLNLAENELIDLDVA--TTL-GQNLVHLDSLDLS-NCHLK--GP-LSEDAFV--NATKLR 216
L+L +N + + TTL + ++L S + NCH+ G L + V N +
Sbjct: 633 LLSLYDNRITTISPGAFTTLVSLSTINLLSNPFNCNCHMAWLGRWLRKRRIVSGNPRCQK 692
Query: 217 TLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLS-RLPANTFHRFTCLQELDISHNPLI 275
+L P+ VA++ T +C LS R P + TC++ + N +
Sbjct: 693 PFFLKEIPIQ----DVAIQDFT-CEGNEENSCQLSPRCP----EQCTCVETVVRCSNRGL 743
Query: 276 DAFTALLSPLESLEHLDMGYSNLQRISR--STFLKMTSLKTLILSGNKLETLESGLFQNL 333
+ P + E L + ++L + + STF ++T + LS N + L + F N+
Sbjct: 744 HTLPKGM-PKDVTE-LYLEGNHLTAVPKELSTFRQLTLID---LSNNSISMLTNHTFSNM 798
Query: 334 THLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDST 380
+HLS L L+ RL H L L L GN + +P+ +
Sbjct: 799 SHLSTLILS---YNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGS 842
Score = 121 (47.7 bits), Expect = 3.2e-14, Sum P(2) = 3.2e-14
Identities = 63/275 (22%), Positives = 109/275 (39%)
Query: 218 LYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDA 277
L L+ N ++ + + K L L +++L N + + F +QEL ++ N L
Sbjct: 537 LRLNDNDIAVLEATGIFKKLPNLRKINLSNNRIKEVREGAFDGAAGVQELMLTGNQLETM 596
Query: 278 FTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLS 337
+ L L+ L + + + ++ TF ++S++ L L N++ T+ G F L LS
Sbjct: 597 HGRMFRGLSGLKTLMLRSNLISCVNNDTFAGLSSVRLLSLYDNRITTISPGAFTTLVSLS 656
Query: 338 VLELNNCGLTRLNETVFHENYTYPDLEELRL-SGNPLHVLPDSTKQYSMRTIPTQIWKNF 396
+ L L+ H + L + R+ SGNP K + ++ IP Q
Sbjct: 657 TINL----LSNPFNCNCHMAWLGRWLRKRRIVSGNPR-----CQKPFFLKEIPIQDVAIQ 707
Query: 397 DFLVILFILNETVFH----ENYTYPDLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXX 452
DF N E T + +R S LH LP G
Sbjct: 708 DFTCEGNEENSCQLSPRCPEQCTCVETV-VRCSNRGLHTLPKGMPKDVTELYLEGNHLTA 766
Query: 453 CKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSF 487
P + R +T ++L+NN++SM + +F
Sbjct: 767 V------PKELSTFRQLTLIDLSNNSISMLTNHTF 795
Score = 121 (47.7 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 39/117 (33%), Positives = 54/117 (46%)
Query: 17 PGLITINLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNP 75
P L INL+ N I+ V EGAF A + L + L ++ + F L+ L L L N
Sbjct: 557 PNLRKINLSNNRIKEVREGAFDGAAGVQELMLTGNQLETMHGRMFRGLSGLKTLMLRSNL 616
Query: 76 LRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKS--HIDW 130
+ + F L+S+ L L +T ISP AF L L T+ L N H+ W
Sbjct: 617 ISCVNNDTFAGLSSVRLLSLYDNRITTISPGAFTTLVSLSTINLLSNPFNCNCHMAW 673
Score = 81 (33.6 bits), Expect = 4.4e-10, Sum P(2) = 4.4e-10
Identities = 49/162 (30%), Positives = 68/162 (41%)
Query: 134 LGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSL 193
L +L +DL + IS L ++ F+N + L L L+ N L + V G L L L
Sbjct: 771 LSTFRQLTLIDLSNNSISMLTNHTFSNMSHLSTLILSYNRLRCIPVHAFNG--LRSLRVL 828
Query: 194 DLSNCHLKGPLSEDAFVNATKLRTLYLSGNPL----SAADLSVALKPLTK---LHRLSLR 246
L + + E +F + T L L L NPL S LS +K K + R S
Sbjct: 829 TLHGNDISS-VPEGSFNDLTSLSHLALGINPLHCDCSLRWLSEWIKAGYKEPGIARCSSP 887
Query: 247 NCGLSRLPANT-FHRFTCLQELDISHNPLIDAFTALLSPLES 287
RL T HRF C +DI N + L SP ++
Sbjct: 888 ESMADRLLLTTPTHRFQCKGPVDI--NIVAKCNACLSSPCKN 927
Score = 56 (24.8 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 27/125 (21%), Positives = 44/125 (35%)
Query: 418 DLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANN 477
D+ EL L GN L +P I L + F+N ++++L L+ N
Sbjct: 753 DVTELYLEGNHLTAVPK---ELSTFRQLTLIDLSNNSISMLTNHTFSNMSHLSTLILSYN 809
Query: 478 NLSMTSELSFQFXXXXXXXXXXXXXXXXXTHISPTVLRHNRAITSIKLVGNPWKCDCNIA 537
L +F S L +++ + L NP CDC++
Sbjct: 810 RLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLT---SLSHLALGINPLHCDCSLR 866
Query: 538 DMWEW 542
+ EW
Sbjct: 867 WLSEW 871
>MGI|MGI:1915557 [details] [associations]
symbol:Lrriq4 "leucine-rich repeats and IQ motif containing
4" species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000048 PROSITE:PS50096
PROSITE:PS51450 SMART:SM00015 MGI:MGI:1915557 eggNOG:COG4886
GeneTree:ENSGT00700000104287 EMBL:AK015024 EMBL:BC145806
IPI:IPI00134786 IPI:IPI00831402 RefSeq:NP_080944.2
UniGene:Mm.389425 ProteinModelPortal:A6H6A4 SMR:A6H6A4 PRIDE:A6H6A4
Ensembl:ENSMUST00000108265 Ensembl:ENSMUST00000108267
Ensembl:ENSMUST00000172350 GeneID:68307 KEGG:mmu:68307
UCSC:uc008ovc.1 UCSC:uc008ovd.1 CTD:344657 HOGENOM:HOG000113384
HOVERGEN:HBG076273 InParanoid:A6H6A4 OMA:CAEGNEA OrthoDB:EOG49P9Z8
NextBio:326967 Bgee:A6H6A4 Genevestigator:A6H6A4 Uniprot:A6H6A4
Length = 596
Score = 216 (81.1 bits), Expect = 3.2e-14, P = 3.2e-14
Identities = 113/378 (29%), Positives = 172/378 (45%)
Query: 22 INLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEP 81
++L N I + ++ LY+ +L + P+ L++L LDLSGNPL I
Sbjct: 89 VHLENNQIAEIPQGIQQLQNTKVLYLHNNSLQDLCPELGA-LSSLESLDLSGNPLVISSL 147
Query: 82 GVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLD 141
V L +L L L R LT I +L+HL+ LS+N L+S + +V N KL
Sbjct: 148 HVVSRLRTLRELRLYRTGLTEIPTGICKSLHHLELFGLSENFLES-LPEEIV--NQTKLR 204
Query: 142 TLDLRQSGISNLP-DNVFANNTWLRNLNLAENELIDL--DVA--TTLGQNLV---HLDSL 193
+ L+Q+ P D N L ++L EN+L + D+ L + V HL SL
Sbjct: 205 EIYLKQNHFEVFPCDLCVLYN--LEVIDLDENKLKSIPGDIGHLVRLQKFYVASNHLMSL 262
Query: 194 --DLSNCHLKGPLS---------EDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHR 242
LS C L + T+L + LSGN L L LH
Sbjct: 263 PESLSQCSKLSVLDLTHNSIHSLPSSLELLTELTEVGLSGNRLEKVPR--LLCSWVSLHL 320
Query: 243 LSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRIS 302
L LRN L L ++F R L+ LD+S N I+ F + L++LE L + + ++++
Sbjct: 321 LYLRNTSLHGL-RDSFKRLINLRFLDLSQNH-IEHFPVQICALKNLEILALDDNKVRQLP 378
Query: 303 RSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYT-YP 361
S L +++LK L L+GN L + +F +L L L + ++L+ EN
Sbjct: 379 PSISL-LSNLKILGLTGNDLLSFPEEIF-SLISLEKLYIGQDQGSKLSS--LPENIKRLM 434
Query: 362 DLEELRLSGNPLHVLPDS 379
+L+EL + N L LP S
Sbjct: 435 NLKELYIENNRLEQLPAS 452
Score = 163 (62.4 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 95/347 (27%), Positives = 154/347 (44%)
Query: 38 VARSL--LYLY-MQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLM 94
+ +SL L L+ + E L + P+ N T L ++ L N + P L +LE +
Sbjct: 173 ICKSLHHLELFGLSENFLESL-PEEIVNQTKLREIYLKQNHFEVF-PCDLCVLYNLEVID 230
Query: 95 LNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLP 154
L+ L I P +L L+ ++ N L S + L KL LDL + I +LP
Sbjct: 231 LDENKLKSI-PGDIGHLVRLQKFYVASNHLMSLPE---SLSQCSKLSVLDLTHNSIHSLP 286
Query: 155 DNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATK 214
++ T L + L+ N L + L + V L L L N L G D+F
Sbjct: 287 SSLELL-TELTEVGLSGNRL---EKVPRLLCSWVSLHLLYLRNTSLHG--LRDSFKRLIN 340
Query: 215 LRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPL 274
LR L LS N + V + L L L+L + + +LP + + L+ L ++ N L
Sbjct: 341 LRFLDLSQNHIE--HFPVQICALKNLEILALDDNKVRQLPPS-ISLLSNLKILGLTGNDL 397
Query: 275 IDAFTALLSPLESLEHLDMGYSNLQRISR--STFLKMTSLKTLILSGNKLETLESGLFQN 332
+ +F + L SLE L +G ++S ++ +LK L + N+LE L + L
Sbjct: 398 L-SFPEEIFSLISLEKLYIGQDQGSKLSSLPENIKRLMNLKELYIENNRLEQLPASLGL- 455
Query: 333 LTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDS 379
+ +L VL+ + L +L + + +L EL L N L LP++
Sbjct: 456 MPNLEVLDCRHNLLKQLPDAICRTR----NLRELLLEDNLLCCLPEN 498
Score = 129 (50.5 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 69/229 (30%), Positives = 98/229 (42%)
Query: 19 LITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRI 78
L + L+ N ++ V SL LY++ +L + F L L LDLS N +
Sbjct: 295 LTEVGLSGNRLEKVPRLLCSWVSLHLLYLRNTSLHGLRDSF-KRLINLRFLDLSQNHIEH 353
Query: 79 IEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLG 138
P L +LE L L+ + + PS L++LK L L+ N L S + L +L
Sbjct: 354 F-PVQICALKNLEILALDDNKVRQLPPS-ISLLSNLKILGLTGNDLLSFPEEIFSLISLE 411
Query: 139 KLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNC 198
KL + S +S+LP+N+ L+ L + N L L + L NL + LD +
Sbjct: 412 KLYIGQDQGSKLSSLPENIKRLMN-LKELYIENNRLEQLPASLGLMPNL---EVLDCRHN 467
Query: 199 HLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRN 247
LK DA LR L L N L L L L L L+L N
Sbjct: 468 LLKQ--LPDAICRTRNLRELLLEDNLLCC--LPENLDHLVNLKVLTLMN 512
Score = 126 (49.4 bits), Expect = 0.00020, P = 0.00020
Identities = 105/451 (23%), Positives = 172/451 (38%)
Query: 54 KINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNH 113
K P L L ++ L N + I G+ L + + L L+ +L + P L+
Sbjct: 74 KTIPSEILALKELEEVHLENNQIAEIPQGI-QQLQNTKVLYLHNNSLQDLCPE-LGALSS 131
Query: 114 LKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENE 173
L++L+LS N L I V+ L L L L ++G++ +P + + L L+EN
Sbjct: 132 LESLDLSGNPLV--ISSLHVVSRLRTLRELRLYRTGLTEIPTGICKSLHHLELFGLSENF 189
Query: 174 LIDLDVATTLGQNLVHLDSLDLSNCHLKG-PLSEDAFVNATKLRTLYLSGNPLSAADLSV 232
L L N L + L H + P N L + L N L + +
Sbjct: 190 LESLPEEIV---NQTKLREIYLKQNHFEVFPCDLCVLYN---LEVIDLDENKLKSIPGDI 243
Query: 233 ALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLD 292
L +L + + + L LP + + + L LD++HN I + + L L L +
Sbjct: 244 G--HLVRLQKFYVASNHLMSLP-ESLSQCSKLSVLDLTHNS-IHSLPSSLELLTELTEVG 299
Query: 293 MGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNET 352
+ + L+++ R SL L L L L F+ L +L L+L+ +
Sbjct: 300 LSGNRLEKVPR-LLCSWVSLHLLYLRNTSLHGLRDS-FKRLINLRFLDLSQNHIEHFPVQ 357
Query: 353 VFHENYTYPDLEELRLSGNPLHVLPDSTKQYS-----------MRTIPTQIWKNFDFLVI 401
+ +LE L L N + LP S S + + P +I+ L
Sbjct: 358 IC----ALKNLEILALDDNKVRQLPPSISLLSNLKILGLTGNDLLSFPEEIFSLIS-LEK 412
Query: 402 LFILNE-----TVFHENYT-YPDLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKI 455
L+I + + EN +L+EL + N L LP C+
Sbjct: 413 LYIGQDQGSKLSSLPENIKRLMNLKELYIENNRLEQLPAS------LGLMPNLEVLDCRH 466
Query: 456 DYLP--PNVFNNTRNITSLNLANNNLSMTSE 484
+ L P+ TRN+ L L +N L E
Sbjct: 467 NLLKQLPDAICRTRNLRELLLEDNLLCCLPE 497
>UNIPROTKB|F1NRN7 [details] [associations]
symbol:SHOC2 "Leucine-rich repeat protein SHOC-2"
species:9031 "Gallus gallus" [GO:0000164 "protein phosphatase type
1 complex" evidence=IEA] [GO:0046579 "positive regulation of Ras
protein signal transduction" evidence=IEA] InterPro:IPR001611
InterPro:IPR027036 PROSITE:PS51450 InterPro:IPR003591 SMART:SM00369
InterPro:IPR025875 Pfam:PF12799 GeneTree:ENSGT00600000084236
PANTHER:PTHR23155:SF38 IPI:IPI00600917 EMBL:AADN02030891
Ensembl:ENSGALT00000014266 Uniprot:F1NRN7
Length = 529
Score = 215 (80.7 bits), Expect = 3.2e-14, P = 3.2e-14
Identities = 108/392 (27%), Positives = 180/392 (45%)
Query: 57 PQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKT 116
P LT L +L L N L+ + P L +L L L+ +LT + P + DNL L+
Sbjct: 116 PSAVKELTQLTELYLYSNKLQSL-PAEVGCLVNLVTLALSENSLTSL-PDSLDNLKKLRM 173
Query: 117 LELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELID 176
L+L NKL+ + V+ L L TL LR + I+ + ++ N + L L++ EN++
Sbjct: 174 LDLRHNKLR---EIPSVVYRLTSLATLYLRFNRITTVEKDI-KNLSKLTMLSIRENKIKQ 229
Query: 177 LDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKP 236
L +G+ L +L +LD+++ L+ L E+ + T++ L L N L DL +
Sbjct: 230 LPAE--IGE-LCNLITLDVAHNQLEH-LPEE-IGSCTQITNLDLQHNEL--LDLPETIGN 282
Query: 237 LTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYS 296
L+ L RL LR LS +P + + + L EL++ +N + LLS L L L + +
Sbjct: 283 LSSLSRLGLRYNRLSAIP-KSLAKCSELDELNLENNNISTLPEGLLSSLVKLTSLTLARN 341
Query: 297 NLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHE 356
Q + +++ +L + N++ + G+F LS L + + LT L F
Sbjct: 342 CFQSYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSL-PLDFG- 399
Query: 357 NYTYPDLEELRLSGNPLHVLPDSTK---QYSMRTIPTQIWKNFDFLV-ILFILNETVFHE 412
T+ + EL L+ N L +P+ + + + K + L L E E
Sbjct: 400 --TWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEE 457
Query: 413 NY--TYP-------DLEELRLSGNPLHVLPTG 435
N + P DL++L L+ N L LP G
Sbjct: 458 NKLESLPNEIAYLKDLQKLVLTNNQLTTLPRG 489
Score = 187 (70.9 bits), Expect = 3.8e-11, P = 3.8e-11
Identities = 94/339 (27%), Positives = 149/339 (43%)
Query: 19 LITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRI 78
L T+ L N I VE L L ++E + ++ P L L LD++ N L
Sbjct: 194 LATLYLRFNRITTVEKDIKNLSKLTMLSIRENKIKQL-PAEIGELCNLITLDVAHNQLEH 252
Query: 79 IEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLG 138
+ P T + L L L + P NL+ L L L N+L S I +L
Sbjct: 253 L-PEEIGSCTQITNLDLQHNELLDL-PETIGNLSSLSRLGLRYNRL-SAIPKSLA--KCS 307
Query: 139 KLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNC 198
+LD L+L + IS LP+ + ++ L +L LA N V + ++ SL++ +
Sbjct: 308 ELDELNLENNNISTLPEGLLSSLVKLTSLTLARNCFQSYPVGGPSQFSTIY--SLNMEHN 365
Query: 199 HL-KGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANT 257
+ K P F A L L + N L++ L T + L+L L+++P +
Sbjct: 366 RINKIPFG--IFSRAKVLSKLNMKDNQLTSLPLDFGT--WTSMVELNLATNQLTKIPEDV 421
Query: 258 FHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRS-TFLKMTSLKTLI 316
L+ L +S+N L+ + L L LD+ + L+ + +LK L+ L+
Sbjct: 422 -SGLVSLEVLILSNN-LLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLK--DLQKLV 477
Query: 317 LSGNKLETLESGL--FQNLTHLSVLELNNCGLTRLNETV 353
L+ N+L TL G+ NLTHL + E N LT L E +
Sbjct: 478 LTNNQLTTLPRGIGHLTNLTHLGLGE--NL-LTHLPEEI 513
Score = 186 (70.5 bits), Expect = 4.9e-11, P = 4.9e-11
Identities = 103/391 (26%), Positives = 166/391 (42%)
Query: 102 YISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANN 161
++ PSA L L L L NKL+S +G L L TL L ++ +++LPD++ N
Sbjct: 113 HMLPSAVKELTQLTELYLYSNKLQS---LPAEVGCLVNLVTLALSENSLTSLPDSL-DNL 168
Query: 162 TWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLS 221
LR L+L N+L ++ ++ L L +L L + + +D N +KL L +
Sbjct: 169 KKLRMLDLRHNKLREIP---SVVYRLTSLATLYLRFNRIT-TVEKD-IKNLSKLTMLSIR 223
Query: 222 GNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTAL 281
N + L + L L L + + L LP T + LD+ HN L+D
Sbjct: 224 ENKIK--QLPAEIGELCNLITLDVAHNQLEHLPEE-IGSCTQITNLDLQHNELLD-LPET 279
Query: 282 LSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLEL 341
+ L SL L + Y+ L I +S K + L L L N + TL GL +L L+ L L
Sbjct: 280 IGNLSSLSRLGLRYNRLSAIPKS-LAKCSELDELNLENNNISTLPEGLLSSLVKLTSLTL 338
Query: 342 -NNC-------GLTRLNETVFHENYTYPDLEELRLS-GNPLHVLPD-STKQYSMRTIPTQ 391
NC G ++ + T++ N + + ++ + VL + K + ++P
Sbjct: 339 ARNCFQSYPVGGPSQFS-TIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLD 397
Query: 392 IWKNFDFLVILFILNE-TVFHENYT-YPDLEELRLSGNPLHVLPTGNXXXXXXXXXXXXX 449
+ + N+ T E+ + LE L LS N L LP G
Sbjct: 398 FGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEE 457
Query: 450 XXXCKIDYLPPNVFNNTRNITSLNLANNNLS 480
K++ LP N +++ L L NN L+
Sbjct: 458 N---KLESLP-NEIAYLKDLQKLVLTNNQLT 484
>UNIPROTKB|O94898 [details] [associations]
symbol:LRIG2 "Leucine-rich repeats and immunoglobulin-like
domains protein 2" species:9606 "Homo sapiens" [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886 GO:GO:0005737
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 HOGENOM:HOG000113380
HOVERGEN:HBG052353 EMBL:AB018349 EMBL:AL161998 IPI:IPI00478892
PIR:T47152 RefSeq:NP_055628.1 UniGene:Hs.448972 UniGene:Hs.729143
ProteinModelPortal:O94898 SMR:O94898 IntAct:O94898 STRING:O94898
PhosphoSite:O94898 PaxDb:O94898 PRIDE:O94898
Ensembl:ENST00000361127 GeneID:9860 KEGG:hsa:9860 UCSC:uc001edf.1
CTD:9860 GeneCards:GC01P113615 HGNC:HGNC:20889 HPA:HPA015538
MIM:608869 neXtProt:NX_O94898 PharmGKB:PA134905053
InParanoid:O94898 OMA:FPTNHER OrthoDB:EOG41NTKF GenomeRNAi:9860
NextBio:37168 Bgee:O94898 CleanEx:HS_LRIG2 Genevestigator:O94898
GermOnline:ENSG00000198799 Uniprot:O94898
Length = 1065
Score = 227 (85.0 bits), Expect = 3.6e-14, Sum P(2) = 3.6e-14
Identities = 90/365 (24%), Positives = 166/365 (45%)
Query: 13 NLDNPGLITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLS 72
+L++ L + +N N + + ++ L + + +IN Q L LDLS
Sbjct: 93 SLESQTLQEVKMNYNELTEIPYFGEPTSNITLLSLVHNIIPEINAQALQFYPALESLDLS 152
Query: 73 GNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNH-LKTLELSQNKLKSHIDWT 131
N + I+ F P L+YL L+ +T + FDNL+ L ++L++N++ S I
Sbjct: 153 SNIISEIKTSSF-PRMQLKYLNLSNNRITTLEAGCFDNLSSSLLVVKLNRNRM-SMIPPK 210
Query: 132 LVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLD 191
+ L L L+L+++ I + F LR+L + N + L G N +++
Sbjct: 211 IF--KLPHLQFLELKRNRIKIVEGLTFQGLDSLRSLKMQRNGISKLKDGAFFGLN--NME 266
Query: 192 SLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLS 251
L+L + +L +++ L+ LY+S N + A + +L L L L+
Sbjct: 267 ELELEHNNLTR-VNKGWLYGLRMLQQLYVSQNAIERISPD-AWEFCQRLSELDLSYNQLT 324
Query: 252 RLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQ---RISRSTFLK 308
RL + F + L+ L++ N + + L +L+ LD+ + + + F
Sbjct: 325 RLDESAFVGLSLLERLNLGDNRVTHIADGVFRFLSNLQTLDLRNNEISWAIEDASEAFAG 384
Query: 309 MTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRL 368
+TSL LIL GN+++++ F L L L+LNN + + E F + + L+EL L
Sbjct: 385 LTSLTKLILQGNQIKSITKKAFIGLESLEHLDLNNNAIMSIQENAFSQTH----LKELIL 440
Query: 369 SGNPL 373
+ + L
Sbjct: 441 NTSSL 445
Score = 195 (73.7 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 69/267 (25%), Positives = 120/267 (44%)
Query: 13 NLDNPGLITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLS 72
NL + L+ + LN N + + L +L ++ + + F L +L L +
Sbjct: 189 NLSS-SLLVVKLNRNRMSMIPPKIFKLPHLQFLELKRNRIKIVEGLTFQGLDSLRSLKMQ 247
Query: 73 GNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLK--SHIDW 130
N + ++ G F L ++E L L NLT ++ L L+ L +SQN ++ S W
Sbjct: 248 RNGISKLKDGAFFGLNNMEELELEHNNLTRVNKGWLYGLRMLQQLYVSQNAIERISPDAW 307
Query: 131 TLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHL 190
+L LDL + ++ L ++ F + L LNL +N + +A + + L +L
Sbjct: 308 EFCQ----RLSELDLSYNQLTRLDESAFVGLSLLERLNLGDNRVTH--IADGVFRFLSNL 361
Query: 191 DSLDLSNCHLKGPLSE--DAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNC 248
+LDL N + + + +AF T L L L GN + + A L L L L N
Sbjct: 362 QTLDLRNNEISWAIEDASEAFAGLTSLTKLILQGNQIKSITKK-AFIGLESLEHLDLNNN 420
Query: 249 GLSRLPANTFHRFTCLQELDISHNPLI 275
+ + N F + T L+EL ++ + L+
Sbjct: 421 AIMSIQENAFSQ-THLKELILNTSSLL 446
Score = 162 (62.1 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 66/237 (27%), Positives = 111/237 (46%)
Query: 22 INLNANPIQPVEGAFLVA-RSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIE 80
+ L N + V +L R L LY+ + + +I+P + L++LDLS N L ++
Sbjct: 268 LELEHNNLTRVNKGWLYGLRMLQQLYVSQNAIERISPDAWEFCQRLSELDLSYNQLTRLD 327
Query: 81 PGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHI-DWTLVLGNLGK 139
F L+ LE L L +T+I+ F L++L+TL+L N++ I D + L
Sbjct: 328 ESAFVGLSLLERLNLGDNRVTHIADGVFRFLSNLQTLDLRNNEISWAIEDASEAFAGLTS 387
Query: 140 LDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDV----ATTLGQNLVHLDSLDL 195
L L L+ + I ++ F L +L+L N ++ + T L + +++ SL L
Sbjct: 388 LTKLILQGNQIKSITKKAFIGLESLEHLDLNNNAIMSIQENAFSQTHLKELILNTSSL-L 446
Query: 196 SNCHLKGPLS---EDAF---VNATKLRTLYLSGNPLSAADLS--VA---LKPLTKLH 241
+CHLK L ++ F VN + +L+G + DL V LKP + H
Sbjct: 447 CDCHLKWLLQWLVDNNFQHSVNVSCAHPEWLAGQSILNVDLKDFVCDDFLKPQIRTH 503
Score = 42 (19.8 bits), Expect = 3.6e-14, Sum P(2) = 3.6e-14
Identities = 23/91 (25%), Positives = 33/91 (36%)
Query: 532 CDCNIADMWEWATREKGDIGVLVGSTTPTEIGFGASRKK---KGLVCYFDIFTTPTRKRP 588
CDC++ + +W V V P + G S K VC D F P +
Sbjct: 447 CDCHLKWLLQWLVDNNFQHSVNVSCAHPEWLA-GQSILNVDLKDFVC--DDFLKPQIRTH 503
Query: 589 GRELFA--STNKTWA-RYVKEADCPSSKLFR 616
+ A N T V +D P S ++R
Sbjct: 504 PETIIALRGMNVTLTCTAVSSSDSPMSTVWR 534
>WB|WBGene00006366 [details] [associations]
symbol:sym-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0005615 "extracellular space" evidence=IDA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0009792 GO:GO:0005615
InterPro:IPR003591 SMART:SM00369 GeneTree:ENSGT00690000101816
EMBL:Z79598 EMBL:AJ242473 PIR:T19939 RefSeq:NP_510426.1
UniGene:Cel.8136 ProteinModelPortal:G5EFP4 SMR:G5EFP4
EnsemblMetazoa:C44H4.3 GeneID:181555 KEGG:cel:CELE_C44H4.3
CTD:181555 WormBase:C44H4.3 OMA:NMERFWR NextBio:914424
Uniprot:G5EFP4
Length = 680
Score = 217 (81.4 bits), Expect = 4.3e-14, Sum P(2) = 4.3e-14
Identities = 89/313 (28%), Positives = 143/313 (45%)
Query: 64 TTLNKLDLSGNPLRIIE--PGVFDPLTSLEYLMLNRCNLTYISPSAFDNL-NHLKTLELS 120
TT+ +L+ IIE P F L ++ L+L+ + I AF L N ++ L LS
Sbjct: 58 TTMEVRELALENADIIEVGPKAFKTLR-IKKLILSNNRIEKIHDHAFTGLENVMQELSLS 116
Query: 121 QNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVA 180
+N LK + T L L L+ L L+ + I N+ F N T L ++NL N++ + A
Sbjct: 117 ENNLKE-VP-TSALAGLRVLNILSLKCNKIENITTKAFVNMTSLIDVNLGCNQICSM-AA 173
Query: 181 TTLGQNLVHLDSLDL-SNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTK 239
T + L +L L +NC + P A N L L++ N ++A + + LT
Sbjct: 174 DTFANVKMSLQNLILDNNCMTEFP--SKAVRNMNNLIALHIKYNKINAIRQNDFVN-LTS 230
Query: 240 LHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQ 299
L LSL +S + L L ++ N L +L + L+ LD+ ++N
Sbjct: 231 LSMLSLNGNNISEIKGGALQNTPNLHYLYLNENNLQTLDNGVLEQFKQLQVLDLSFNNFT 290
Query: 300 RISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLEL-NNCGLTRLNETVFHENY 358
I++ F + S++ L L N++ + G F T L +L L NNC LT +++
Sbjct: 291 DITKEMFEGLESIQHLNLDSNRISAVAPGAFAG-TPLLLLWLPNNC-LTEVSQQTLKGA- 347
Query: 359 TYPDLEELRLSGN 371
P L + LS N
Sbjct: 348 --PFLRMVSLSNN 358
Score = 174 (66.3 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 76/310 (24%), Positives = 138/310 (44%)
Query: 139 KLDTLDLRQSGISNLPDNVFAN-NTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSN 197
++ L L + I + D+ F ++ L+L+EN L ++ + G ++++ SL
Sbjct: 84 RIKKLILSNNRIEKIHDHAFTGLENVMQELSLSENNLKEVPTSALAGLRVLNILSL---K 140
Query: 198 CHLKGPLSEDAFVNATKLRTLYLSGNPLS--AADLSVALKPLTKLHRLSLRNCGLSRLPA 255
C+ ++ AFVN T L + L N + AAD +K L L L N ++ P+
Sbjct: 141 CNKIENITTKAFVNMTSLIDVNLGCNQICSMAADTFANVK--MSLQNLILDNNCMTEFPS 198
Query: 256 NTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTL 315
L L I +N + L SL L + +N+ I +L L
Sbjct: 199 KAVRNMNNLIALHIKYNKINAIRQNDFVNLTSLSMLSLNGNNISEIKGGALQNTPNLHYL 258
Query: 316 ILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFH--ENYTYPDLEELRLS---- 369
L+ N L+TL++G+ + L VL+L+ T + + +F E+ + +L+ R+S
Sbjct: 259 YLNENNLQTLDNGVLEQFKQLQVLDLSFNNFTDITKEMFEGLESIQHLNLDSNRISAVAP 318
Query: 370 ----GNPLHVL--PDSTKQYSMRTIPTQIWKNFDFLVILFILNETV--FHE-NYTY-PDL 419
G PL +L P++ + + Q K FL ++ + N + HE ++ + P+L
Sbjct: 319 GAFAGTPLLLLWLPNNC----LTEVSQQTLKGAPFLRMVSLSNNNIREVHELSFDHLPNL 374
Query: 420 EELRLSGNPL 429
L L+ N +
Sbjct: 375 HTLDLANNKI 384
Score = 166 (63.5 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 65/276 (23%), Positives = 122/276 (44%)
Query: 72 SGNP-LRIIEPGVFDPLTSLEY--LMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHI 128
SG+ LR++E T++E L L ++ + P AF L +K L LS N+++
Sbjct: 43 SGHDGLRMVEK--LSTTTTMEVRELALENADIIEVGPKAFKTLR-IKKLILSNNRIEKIH 99
Query: 129 DWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLV 188
D G + L L ++ + +P + A L L+L N++ + + T N+
Sbjct: 100 DHAFT-GLENVMQELSLSENNLKEVPTSALAGLRVLNILSLKCNKIEN--ITTKAFVNMT 156
Query: 189 HLDSLDLSNCHLKGPLSEDAFVNAT-KLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRN 247
L ++L C+ ++ D F N L+ L L N ++ S A++ + L L ++
Sbjct: 157 SLIDVNLG-CNQICSMAADTFANVKMSLQNLILDNNCMTEFP-SKAVRNMNNLIALHIKY 214
Query: 248 CGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFL 307
++ + N F T L L ++ N + + L +L +L + +NLQ +
Sbjct: 215 NKINAIRQNDFVNLTSLSMLSLNGNNISEIKGGALQNTPNLHYLYLNENNLQTLDNGVLE 274
Query: 308 KMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNN 343
+ L+ L LS N + +F+ L + L L++
Sbjct: 275 QFKQLQVLDLSFNNFTDITKEMFEGLESIQHLNLDS 310
Score = 151 (58.2 bits), Expect = 6.5e-07, Sum P(2) = 6.5e-07
Identities = 64/231 (27%), Positives = 102/231 (44%)
Query: 19 LITINLNANPIQPVEG-AFL-VARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPL 76
LI +NL N I + F V SL L + +++ + N+ L L + N +
Sbjct: 158 LIDVNLGCNQICSMAADTFANVKMSLQNLILDNNCMTEFPSKAVRNMNNLIALHIKYNKI 217
Query: 77 RIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGN 136
I F LTSL L LN N++ I A N +L L L++N L++ +D VL
Sbjct: 218 NAIRQNDFVNLTSLSMLSLNGNNISEIKGGALQNTPNLHYLYLNENNLQT-LD-NGVLEQ 275
Query: 137 LGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLS 196
+L LDL + +++ +F +++LNL N + + G L+ L L +
Sbjct: 276 FKQLQVLDLSFNNFTDITKEMFEGLESIQHLNLDSNRISAVAPGAFAGTPLLLL-WLP-N 333
Query: 197 NCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRN 247
NC + +S+ A LR + LS N + ++ L LH L L N
Sbjct: 334 NCLTE--VSQQTLKGAPFLRMVSLSNNNIREVH-ELSFDHLPNLHTLDLAN 381
Score = 150 (57.9 bits), Expect = 8.3e-07, Sum P(2) = 8.3e-07
Identities = 60/206 (29%), Positives = 95/206 (46%)
Query: 41 SLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNL 100
+L+ L+++ ++ I F NLT+L+ L L+GN + I+ G +L YL LN NL
Sbjct: 206 NLIALHIKYNKINAIRQNDFVNLTSLSMLSLNGNNISEIKGGALQNTPNLHYLYLNENNL 265
Query: 101 TYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFAN 160
+ + L+ L+LS N + I + G L + L+L + IS + FA
Sbjct: 266 QTLDNGVLEQFKQLQVLDLSFNNF-TDITKEMFEG-LESIQHLNLDSNRISAVAPGAFAG 323
Query: 161 NTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYL 220
T L L L N L ++ T G + + SL +N LS D N L TL L
Sbjct: 324 -TPLLLLWLPNNCLTEVSQQTLKGAPFLRMVSLSNNNIREVHELSFDHLPN---LHTLDL 379
Query: 221 SGNPLSAADLSVALKPLTKLHRLSLR 246
+ N + +S+ K L+ L++R
Sbjct: 380 ANNKI----MSLQNKSLSGPENLAVR 401
Score = 144 (55.7 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 76/320 (23%), Positives = 142/320 (44%)
Query: 24 LNANPIQPV-EGAFLVARSLLY-LYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEP 81
L+ N I+ + + AF +++ L + E L ++ L LN L L N + I
Sbjct: 90 LSNNRIEKIHDHAFTGLENVMQELSLSENNLKEVPTSALAGLRVLNILSLKCNKIENITT 149
Query: 82 GVFDPLTSLEYLMLNRCN-LTYISPSAFDNLN-HLKTLELSQNKLKSHIDWTLVLGNLGK 139
F +TSL + L CN + ++ F N+ L+ L L N + + + N+
Sbjct: 150 KAFVNMTSLIDVNLG-CNQICSMAADTFANVKMSLQNLILDNNCMTEFP--SKAVRNMNN 206
Query: 140 LDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCH 199
L L ++ + I+ + N F N T L L+L N + ++ QN +L L L+ +
Sbjct: 207 LIALHIKYNKINAIRQNDFVNLTSLSMLSLNGNNISEIKGGAL--QNTPNLHYLYLNENN 264
Query: 200 LKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVAL-KPLTKLHRLSLRNCGLSRLPANTF 258
L+ L +L+ L LS N + D++ + + L + L+L + +S + F
Sbjct: 265 LQ-TLDNGVLEQFKQLQVLDLSFNNFT--DITKEMFEGLESIQHLNLDSNRISAVAPGAF 321
Query: 259 HRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILS 318
T L L + +N L + L L + + +N++ + +F + +L TL L+
Sbjct: 322 AG-TPLLLLWLPNNCLTEVSQQTLKGAPFLRMVSLSNNNIREVHELSFDHLPNLHTLDLA 380
Query: 319 GNKLETLESGLFQNLTHLSV 338
NK+ +L++ +L+V
Sbjct: 381 NNKIMSLQNKSLSGPENLAV 400
Score = 129 (50.5 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 75/331 (22%), Positives = 134/331 (40%)
Query: 164 LRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATK-LRTLYLSG 222
+R L L ++I+ V + L + L LSN ++ + + AF ++ L LS
Sbjct: 62 VRELALENADIIE--VGPKAFKTL-RIKKLILSNNRIE-KIHDHAFTGLENVMQELSLSE 117
Query: 223 NPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALL 282
N L S AL L L+ LSL+ + + F T L ++++ N +
Sbjct: 118 NNLKEVPTS-ALAGLRVLNILSLKCNKIENITTKAFVNMTSLIDVNLGCNQICSMAADTF 176
Query: 283 SPLE-SLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLEL 341
+ ++ SL++L + + + M +L L + NK+ + F NLT LS+L L
Sbjct: 177 ANVKMSLQNLILDNNCMTEFPSKAVRNMNNLIALHIKYNKINAIRQNDFVNLTSLSMLSL 236
Query: 342 NNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDST-KQYSMRTIPTQIWKNF-DFL 399
N ++ + P+L L L+ N L L + +Q+ + + NF D
Sbjct: 237 NGNNISEIKGGALQNT---PNLHYLYLNENNLQTLDNGVLEQFKQLQVLDLSFNNFTDIT 293
Query: 400 VILFILNETVFHENYTYPDLEELR---LSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKID 456
+F E++ H N + + +G PL +L N ++
Sbjct: 294 KEMFEGLESIQHLNLDSNRISAVAPGAFAGTPLLLLWLPNNCLTEVSQQTLKGAPFLRMV 353
Query: 457 YLPPN--------VFNNTRNITSLNLANNNL 479
L N F++ N+ +L+LANN +
Sbjct: 354 SLSNNNIREVHELSFDHLPNLHTLDLANNKI 384
Score = 123 (48.4 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 70/304 (23%), Positives = 122/304 (40%)
Query: 188 VHLDSLDLSNCHLKGPLSEDAFVNATK-LRTLYLSGNPLSAADLSVALKPLTKLHRLSLR 246
+ + L LSN ++ + + AF ++ L LS N L S AL L L+ LSL+
Sbjct: 83 LRIKKLILSNNRIE-KIHDHAFTGLENVMQELSLSENNLKEVPTS-ALAGLRVLNILSLK 140
Query: 247 NCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLE-SLEHLDMGYSNLQRISRST 305
+ + F T L ++++ N + + ++ SL++L + + +
Sbjct: 141 CNKIENITTKAFVNMTSLIDVNLGCNQICSMAADTFANVKMSLQNLILDNNCMTEFPSKA 200
Query: 306 FLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEE 365
M +L L + NK+ + F NLT LS+L LN ++ + P+L
Sbjct: 201 VRNMNNLIALHIKYNKINAIRQNDFVNLTSLSMLSLNGNNISEIKGGALQNT---PNLHY 257
Query: 366 LRLSGNPLHVLPDST-KQYSMRTIPTQIWKNF-DFLVILFILNETVFHENYTYPDLEELR 423
L L+ N L L + +Q+ + + NF D +F E++ H N L+ R
Sbjct: 258 LYLNENNLQTLDNGVLEQFKQLQVLDLSFNNFTDITKEMFEGLESIQHLN-----LDSNR 312
Query: 424 LSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNLSMTS 483
+S V P G C + + + ++L+NNN+
Sbjct: 313 ISA----VAP-G--AFAGTPLLLLWLPNNCLTE-VSQQTLKGAPFLRMVSLSNNNIREVH 364
Query: 484 ELSF 487
ELSF
Sbjct: 365 ELSF 368
Score = 122 (48.0 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 46/187 (24%), Positives = 88/187 (47%)
Query: 12 RNLDNPGLITINLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLD 70
RN++N LI +++ N I + + F+ SL L + +S+I N L+ L
Sbjct: 202 RNMNN--LIALHIKYNKINAIRQNDFVNLTSLSMLSLNGNNISEIKGGALQNTPNLHYLY 259
Query: 71 LSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDW 130
L+ N L+ ++ GV + L+ L L+ N T I+ F+ L ++ L L N++ +
Sbjct: 260 LNENNLQTLDNGVLEQFKQLQVLDLSFNNFTDITKEMFEGLESIQHLNLDSNRISAVAPG 319
Query: 131 TLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHL 190
G L L L + ++ + +LR ++L+ N + ++ + +L +L
Sbjct: 320 AFA-GT--PLLLLWLPNNCLTEVSQQTLKGAPFLRMVSLSNNNIREVHELSF--DHLPNL 374
Query: 191 DSLDLSN 197
+LDL+N
Sbjct: 375 HTLDLAN 381
Score = 46 (21.3 bits), Expect = 4.3e-14, Sum P(2) = 4.3e-14
Identities = 15/57 (26%), Positives = 25/57 (43%)
Query: 533 DCNIADMWEWATREKGDIGVLVGSTTPTEIGFGASRKKK-GLVCYFDIFTTPTRKRP 588
D + D E E+ ++ STT T AS+ KK + ++ + P+ K P
Sbjct: 518 DVYVDDDEEGTEEEEEEVSTTEKSTTTTTTTTEASKSKKVNMERFWRLSNKPSGKSP 574
>UNIPROTKB|J9NZ68 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005576 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 Pfam:PF00054 SMART:SM00274 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF12661 Pfam:PF01463
GeneTree:ENSGT00700000104083 EMBL:AAEX03002614 EMBL:AAEX03002615
EMBL:AAEX03002616 Ensembl:ENSCAFT00000044488 Uniprot:J9NZ68
Length = 1337
Score = 194 (73.4 bits), Expect = 4.5e-14, Sum P(3) = 4.5e-14
Identities = 79/329 (24%), Positives = 144/329 (43%)
Query: 17 PGLIT-INLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGN 74
P IT I L N I+ + GAF + L + + +S++ P F L +LN L L GN
Sbjct: 106 PETITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 165
Query: 75 PLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVL 134
+ + +F+ L SL+ L+LN + + AF +L++L L L NKL++ T
Sbjct: 166 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTF-- 223
Query: 135 GNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLD 194
L + T+ L Q+ P + WL + L N + T + L +
Sbjct: 224 SPLRAIQTMHLAQN-----PFICDCHLKWLADY-LHTNPIETSGARCTSPRRLANKRIGQ 277
Query: 195 LSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLP 254
+ + + E F+ T+ LSG+ ADL+ K + + N L+++P
Sbjct: 278 IKSKKFRCSAKEQYFIPGTEDYRSKLSGDCF--ADLACPEKCRCEGTTVDCSNQKLTKIP 335
Query: 255 ANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKT 314
+ ++T L+ + +++A T + L L ++ + + I F +
Sbjct: 336 DH-IPQYTAELRLNNNEFTVLEA-TGIFKKLPQLRKINFSNNKITDIEEGAFEGAAGVNE 393
Query: 315 LILSGNKLETLESGLFQNLTHLSVLELNN 343
++L+ N+LE ++ +F+ L L L L +
Sbjct: 394 ILLTSNRLENVQHKMFKGLESLKTLMLRS 422
Score = 138 (53.6 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 83/359 (23%), Positives = 144/359 (40%)
Query: 22 INLNANPIQPVE--GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRII 79
+ LN N +E G F L + ++ I F +N++ L+ N L +
Sbjct: 345 LRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGAAGVNEILLTSNRLENV 404
Query: 80 EPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGK 139
+ +F L SL+ LML ++ + +F L+ ++ L L N++ + L
Sbjct: 405 QHKMFKGLESLKTLMLRSNRISCVGNDSFIGLSSVRLLSLYDNQIATIAPGAF--DTLHS 462
Query: 140 LDTLDLRQSGISNLPDNVFANNTWLRNLNLAENE--------LIDLDVATTLGQNLVHLD 191
L TL+L + N + WLR + L ++ + Q+ D
Sbjct: 463 LSTLNLLANPF-NCNCYLAWLGEWLRKKRIVTGNPRCQKPYFLKEIPIQDVAIQDFTCDD 521
Query: 192 SLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTK-LHRLSLRNCGL 250
D S+C PLS T L T+ N L V K + + + L L
Sbjct: 522 GNDDSSC---SPLSRCP-TECTCLDTVVRCSNK----GLKVLPKGIPRDVTELYLDGNHF 573
Query: 251 SRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMT 310
+ +P ++ + L +D+S+N + S + L L + Y+ L+ I TF +
Sbjct: 574 TLVPKELYN-YKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLK 632
Query: 311 SLKTLILSGNKLETLESGLFQNLTHLSVLELN------NCGLTRLNETVFHENYTYPDL 363
SL+ L L GN + + G F +L+ LS L + +C + L++ V E Y P +
Sbjct: 633 SLRLLSLHGNDISVVPEGAFSDLSALSHLAIGANPLYCDCNMQWLSDWVKSE-YKEPGI 690
Score = 121 (47.7 bits), Expect = 2.5e-06, Sum P(3) = 2.5e-06
Identities = 39/145 (26%), Positives = 63/145 (43%)
Query: 246 RNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRST 305
R GL+ +P N T E+ + N + SP + L +D+ + + ++
Sbjct: 94 RGKGLTEIPTNLPETIT---EIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDA 150
Query: 306 FLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEE 365
F + SL +L+L GNK+ L LF+ L L +L LN + L F + + +L
Sbjct: 151 FQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLH---NLNL 207
Query: 366 LRLSGNPLHVLPDSTKQYSMRTIPT 390
L L N L + T +R I T
Sbjct: 208 LSLYDNKLQTIAKGTFS-PLRAIQT 231
Score = 111 (44.1 bits), Expect = 2.7e-05, Sum P(3) = 2.7e-05
Identities = 34/107 (31%), Positives = 49/107 (45%)
Query: 17 PGLITINLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNP 75
P L IN + N I +E GAF A + + + L + + F L +L L L N
Sbjct: 365 PQLRKINFSNNKITDIEEGAFEGAAGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNR 424
Query: 76 LRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQN 122
+ + F L+S+ L L + I+P AFD L+ L TL L N
Sbjct: 425 ISCVGNDSFIGLSSVRLLSLYDNQIATIAPGAFDTLHSLSTLNLLAN 471
Score = 108 (43.1 bits), Expect = 5.5e-05, Sum P(3) = 5.5e-05
Identities = 31/130 (23%), Positives = 62/130 (47%)
Query: 243 LSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRIS 302
+ L + +P F + L+ +D+S+N + + L SL L + + + +
Sbjct: 112 IRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELP 171
Query: 303 RSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPD 362
+S F + SL+ L+L+ NK+ L FQ+L +L++L L + L + + F
Sbjct: 172 KSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRA--- 228
Query: 363 LEELRLSGNP 372
++ + L+ NP
Sbjct: 229 IQTMHLAQNP 238
Score = 78 (32.5 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 35/180 (19%), Positives = 69/180 (38%)
Query: 369 SGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNET-VFHENYTYPDLEELRLSGN 427
S L +PD QY T ++ N +F V L T +F + P L ++ S N
Sbjct: 327 SNQKLTKIPDHIPQY---TAELRL-NNNEFTV----LEATGIFKK---LPQLRKINFSNN 375
Query: 428 PLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSF 487
+ + G +++ + +F ++ +L L +N +S SF
Sbjct: 376 KITDIEEGAFEGAAGVNEILLTSN--RLENVQHKMFKGLESLKTLMLRSNRISCVGNDSF 433
Query: 488 QFXXXXXXXXXXXXXXXXXTHISPTVLRHNRAITSIKLVGNPWKCDCNIADMWEWATREK 547
I+P +++++ L+ NP+ C+C +A + EW +++
Sbjct: 434 ---IGLSSVRLLSLYDNQIATIAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKR 490
Score = 64 (27.6 bits), Expect = 4.5e-14, Sum P(3) = 4.5e-14
Identities = 18/76 (23%), Positives = 32/76 (42%)
Query: 412 ENYTYPDLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITS 471
E Y Y L + LS N + L N ++ +PP F+ +++
Sbjct: 579 ELYNYKHLTLIDLSNNRISTL--SNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRL 636
Query: 472 LNLANNNLSMTSELSF 487
L+L N++S+ E +F
Sbjct: 637 LSLHGNDISVVPEGAF 652
Score = 60 (26.2 bits), Expect = 4.5e-14, Sum P(3) = 4.5e-14
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 519 AITSIKLVGNPWKCDCNIADMWEWATREKGDIGV 552
A++ + + NP CDCN+ + +W E + G+
Sbjct: 657 ALSHLAIGANPLYCDCNMQWLSDWVKSEYKEPGI 690
Score = 53 (23.7 bits), Expect = 5.9e-13, Sum P(3) = 5.9e-13
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 458 LPPNVFNNTRNITSLNLANNNLSMTSELSF 487
L P N +++T ++L+NN +S S SF
Sbjct: 575 LVPKELYNYKHLTLIDLSNNRISTLSNQSF 604
Score = 53 (23.7 bits), Expect = 0.00097, Sum P(2) = 0.00096
Identities = 9/19 (47%), Positives = 14/19 (73%)
Query: 518 RAITSIKLVGNPWKCDCNI 536
RAI ++ L NP+ CDC++
Sbjct: 227 RAIQTMHLAQNPFICDCHL 245
Score = 41 (19.5 bits), Expect = 3.8e-12, Sum P(3) = 3.8e-12
Identities = 12/46 (26%), Positives = 20/46 (43%)
Query: 526 VGNPWKCDCNIADMWEWATREKGDIGVLVGSTTPTEIGFGASRKKK 571
+G P+ C+C+ + RE G V P + G+ A + K
Sbjct: 1239 LGQPY-CECSSGYTGDSCDREVSCRGERVRDYYPKQQGYAACQTTK 1283
>UNIPROTKB|O75094 [details] [associations]
symbol:SLIT3 "Slit homolog 3 protein" species:9606 "Homo
sapiens" [GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IEA]
[GO:0010629 "negative regulation of gene expression" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=NAS] [GO:0005739
"mitochondrion" evidence=NAS] [GO:0005615 "extracellular space"
evidence=IDA] [GO:0048846 "axon extension involved in axon
guidance" evidence=IDA] [GO:0050919 "negative chemotaxis"
evidence=IDA] [GO:0061364 "apoptotic process involved in
luteolysis" evidence=IEP] [GO:0032870 "cellular response to hormone
stimulus" evidence=IEP] [GO:0051414 "response to cortisol stimulus"
evidence=IEP] [GO:0048495 "Roundabout binding" evidence=IPI]
[GO:0021834 "chemorepulsion involved in embryonic olfactory bulb
interneuron precursor migration" evidence=IDA] [GO:0007411 "axon
guidance" evidence=IDA;TAS] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IMP] [GO:0030308
"negative regulation of cell growth" evidence=IMP] [GO:0035385
"Roundabout signaling pathway" evidence=IMP] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005739
Reactome:REACT_111045 GO:GO:0008285 GO:GO:0005615 GO:GO:0007420
GO:GO:0030308 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887 PROSITE:PS01186
GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791 SMART:SM00282
PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 GO:GO:0048846 GO:GO:0070100 Pfam:PF12661
Pfam:PF01463 GO:GO:0051414 GO:GO:0050919 GO:GO:0035385
GO:GO:0061364 HOGENOM:HOG000116120 HOVERGEN:HBG057959
OrthoDB:EOG4D7Z4T EMBL:AB017169 EMBL:AB011538 EMBL:AY358884
EMBL:AC008409 EMBL:AC008479 EMBL:AC011365 EMBL:AC011389
EMBL:AC027311 EMBL:AC094081 EMBL:AC112165 EMBL:BC146759
EMBL:AL122074 EMBL:AF075240 IPI:IPI00409709 IPI:IPI00409710
IPI:IPI00983148 PIR:T34555 RefSeq:NP_003053.1 UniGene:Hs.604116
ProteinModelPortal:O75094 SMR:O75094 IntAct:O75094
MINT:MINT-2797284 STRING:O75094 PhosphoSite:O75094 PaxDb:O75094
PRIDE:O75094 Ensembl:ENST00000404867 Ensembl:ENST00000519560
GeneID:6586 KEGG:hsa:6586 UCSC:uc003mab.3 CTD:6586
GeneCards:GC05M168021 H-InvDB:HIX0005394 HGNC:HGNC:11087
HPA:HPA051630 MIM:603745 neXtProt:NX_O75094 PharmGKB:PA35940
InParanoid:O75094 KO:K06850 PhylomeDB:O75094 ChiTaRS:SLIT3
GenomeRNAi:6586 NextBio:25629 Bgee:O75094 CleanEx:HS_SLIT3
Genevestigator:O75094 GermOnline:ENSG00000184347 Uniprot:O75094
Length = 1523
Score = 201 (75.8 bits), Expect = 5.4e-12, P = 5.4e-12
Identities = 87/319 (27%), Positives = 132/319 (41%)
Query: 60 FTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLEL 119
F L L K++LS N ++ + G FD S++ LML L + F L+ LKTL L
Sbjct: 553 FKKLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRVFRGLSGLKTLML 612
Query: 120 SQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENEL-IDLD 178
N + + T L + L L + I+ + F L +NL N +
Sbjct: 613 RSNLIGCVSNDTFA--GLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNCH 670
Query: 179 VATTLGQNLVHLDSLDLSNCHLKGPLS-EDAFVNATKLRTLYLSGNPLSAADLSVALKPL 237
+A LG+ L + N + P ++ + ++ GN S+ LS
Sbjct: 671 LAW-LGKWL-RKRRIVSGNPRCQKPFFLKEIPIQDVAIQDFTCDGNEESSCQLSPRCPEQ 728
Query: 238 TKLHRLSLR--NCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGY 295
+R N GL LP T EL + N L A LS L L +D+
Sbjct: 729 CTCMETVVRCSNKGLRALPRGMPKDVT---ELYLEGNHLT-AVPRELSALRHLTLIDLSN 784
Query: 296 SNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFH 355
+++ ++ TF M+ L TLILS N+L + F L L VL L+ ++ + E F+
Sbjct: 785 NSISMLTNYTFSNMSHLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFN 844
Query: 356 ENYTYPDLEELRLSGNPLH 374
+ L L L NPLH
Sbjct: 845 D---LTSLSHLALGTNPLH 860
Score = 197 (74.4 bits), Expect = 6.9e-12, Sum P(2) = 6.9e-12
Identities = 86/361 (23%), Positives = 155/361 (42%)
Query: 19 LITINLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLR 77
L ++L N + +E GAF + L L + + L + F + L +LDLS N ++
Sbjct: 87 LRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDLSENQIQ 146
Query: 78 IIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNL 137
I F +T ++ L L+ +++ I AF L L+ L L+ N + S I T ++
Sbjct: 147 GIPRKAFRGITDVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNI-SRILVTS-FNHM 204
Query: 138 GKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSN 197
K+ TL L + + ++ + WLR + + G N+ + +
Sbjct: 205 PKIRTLRLHSNHLY-CDCHLAWLSDWLRQRRTVGQFTLCMAPVHLRGFNVADVQKKEYV- 262
Query: 198 CHLKGPLSEDAFVNATKLRT---LYLSGNPLSAADLSVALKPLTK---LHRLSLRNCGLS 251
C P SE NA + S N + + P + + L +
Sbjct: 263 C--PAPHSEPPSCNANSISCPSPCTCSNNIVDCRGKGLMEIPANLPEGIVEIRLEQNSIK 320
Query: 252 RLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTS 311
+PA F ++ L+ +DIS N + D L+SL L + + + I + F + S
Sbjct: 321 AIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIVKGLFDGLVS 380
Query: 312 LKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGN 371
L+ L+L+ NK+ L FQ+L +L++L L + L +++ +F ++ L L+ N
Sbjct: 381 LQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAP---LQSIQTLHLAQN 437
Query: 372 P 372
P
Sbjct: 438 P 438
Score = 165 (63.1 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 73/312 (23%), Positives = 140/312 (44%)
Query: 42 LLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLT 101
++ + +++ ++ I FT L ++D+S N + I P F L SL L+L +T
Sbjct: 309 IVEIRLEQNSIKAIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKIT 368
Query: 102 YISPSAFDNLNHLKTLELSQNKLKS-HIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFAN 160
I FD L L+ L L+ NK+ ++ L NL L D + IS +FA
Sbjct: 369 EIVKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISK---GLFAP 425
Query: 161 NTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLS-EDAFVNATKLRTLY 219
++ L+LA+N + D + + + ++ S P + ++ K +
Sbjct: 426 LQSIQTLHLAQNPFV-CDCHLKWLADYLQDNPIETSGARCSSPRRLANKRISQIKSKKFR 484
Query: 220 LSGNP-----LSAA---DLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISH 271
SG+ S+ DL K + + N L R+P++ T L+ L+ +
Sbjct: 485 CSGSEDYRSRFSSECFMDLVCPEKCRCEGTIVDCSNQKLVRIPSHLPEYVTDLR-LNDNE 543
Query: 272 NPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQ 331
+++A T + L +L +++ + ++ + F S++ L+L+GN+LET+ +F+
Sbjct: 544 VSVLEA-TGIFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRVFR 602
Query: 332 NLTHLSVLELNN 343
L+ L L L +
Sbjct: 603 GLSGLKTLMLRS 614
Score = 151 (58.2 bits), Expect = 4.7e-14, Sum P(3) = 4.7e-14
Identities = 44/132 (33%), Positives = 67/132 (50%)
Query: 18 GLITINLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPL 76
G++ I L N I+ + GAF + L + + + +S I P F L +L L L GN +
Sbjct: 308 GIVEIRLEQNSIKAIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKI 367
Query: 77 RIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGN 136
I G+FD L SL+ L+LN + + + F +L +L L L NKL++ I L
Sbjct: 368 TEIVKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQT-ISKGL-FAP 425
Query: 137 LGKLDTLDLRQS 148
L + TL L Q+
Sbjct: 426 LQSIQTLHLAQN 437
Score = 141 (54.7 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 86/324 (26%), Positives = 145/324 (44%)
Query: 69 LDLSGNPLRIIEP-GVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSH 127
L L+ N + ++E G+F L +L + L+ + + AFD ++ L L+ N+L++
Sbjct: 537 LRLNDNEVSVLEATGIFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLET- 595
Query: 128 IDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVA--TTL-G 184
+ + G L L TL LR + I + ++ FA + +R L+L +N + + TTL
Sbjct: 596 VHGRVFRG-LSGLKTLMLRSNLIGCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVS 654
Query: 185 QNLVHLDSLDLS-NCHLK--GP-LSEDAFV--NATKLRTLYLSGNPLSAADLSVALKPLT 238
+ ++L S + NCHL G L + V N + +L P+ VA++ T
Sbjct: 655 LSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPFFLKEIPIQ----DVAIQDFT 710
Query: 239 KLHRLSLRNCGLS-RLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSN 297
+C LS R P + TC++ + N + A + P + E L + ++
Sbjct: 711 -CDGNEESSCQLSPRCP----EQCTCMETVVRCSNKGLRALPRGM-PKDVTE-LYLEGNH 763
Query: 298 LQRISRSTFLKMTSLKTLI-LSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHE 356
L + R L TLI LS N + L + F N++HLS L L+ RL H
Sbjct: 764 LTAVPRE--LSALRHLTLIDLSNNSISMLTNYTFSNMSHLSTLILS---YNRLRCIPVHA 818
Query: 357 NYTYPDLEELRLSGNPLHVLPDST 380
L L L GN + +P+ +
Sbjct: 819 FNGLRSLRVLTLHGNDISSVPEGS 842
Score = 140 (54.3 bits), Expect = 8.1e-06, Sum P(2) = 8.1e-06
Identities = 41/138 (29%), Positives = 62/138 (44%)
Query: 237 LTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYS 296
L L L L + +S + F L+ L ++ N L L L LD+ +
Sbjct: 84 LKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDLSEN 143
Query: 297 NLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHE 356
+Q I R F +T +K L L N + +E G F+ L L +L LNN ++R+ T F+
Sbjct: 144 QIQGIPRKAFRGITDVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTSFNH 203
Query: 357 NYTYPDLEELRLSGNPLH 374
P + LRL N L+
Sbjct: 204 ---MPKIRTLRLHSNHLY 218
Score = 124 (48.7 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 39/117 (33%), Positives = 55/117 (47%)
Query: 17 PGLITINLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNP 75
P L INL+ N I+ V EGAF A S+ L + L ++ + F L+ L L L N
Sbjct: 557 PNLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRVFRGLSGLKTLMLRSNL 616
Query: 76 LRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKS--HIDW 130
+ + F L+S+ L L +T I+P AF L L T+ L N H+ W
Sbjct: 617 IGCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNCHLAW 673
Score = 121 (47.7 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 31/89 (34%), Positives = 46/89 (51%)
Query: 289 EHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTR 348
E LD+ +N+ RI++ F + +L+ L L N++ +E G FQ+L L L LN L
Sbjct: 64 ERLDLDRNNITRITKMDFAGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQV 123
Query: 349 LNETVFHENYTYPDLEELRLSGNPLHVLP 377
L E +F P L L LS N + +P
Sbjct: 124 LPELLFQST---PKLTRLDLSENQIQGIP 149
Score = 116 (45.9 bits), Expect = 4.7e-14, Sum P(3) = 4.7e-14
Identities = 43/175 (24%), Positives = 77/175 (44%)
Query: 218 LYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDA 277
L L+ N +S + + K L L +++L N + + F +QEL ++ N L
Sbjct: 537 LRLNDNEVSVLEATGIFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETV 596
Query: 278 FTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLS 337
+ L L+ L + + + +S TF ++S++ L L N++ T+ G F L LS
Sbjct: 597 HGRVFRGLSGLKTLMLRSNLIGCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLS 656
Query: 338 VLELNNCGLTRLNETVFHENYTYPDLEELRL-SGNPLHVLPDSTKQYSMRTIPTQ 391
+ L L+ H + L + R+ SGNP P K+ ++ + Q
Sbjct: 657 TINL----LSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQ 707
Score = 115 (45.5 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 40/159 (25%), Positives = 64/159 (40%)
Query: 419 LEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNN 478
LE LRL+ N L VLP +I +P F ++ +L L NN+
Sbjct: 111 LERLRLNKNKLQVLP--ELLFQSTPKLTRLDLSENQIQGIPRKAFRGITDVKNLQLDNNH 168
Query: 479 LSMTSELSFQFXXXXXXXXXXXXXXXXXTHISPTVLRHNRAITSIKLVGNPWKCDCNIAD 538
+S + +F+ + I T H I +++L N CDC++A
Sbjct: 169 ISCIEDGAFR---ALRDLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAW 225
Query: 539 MWEWATREKGDIGVLVGSTTPTEI-GFG-ASRKKKGLVC 575
+ +W R++ +G P + GF A +KK VC
Sbjct: 226 LSDWL-RQRRTVGQFTLCMAPVHLRGFNVADVQKKEYVC 263
Score = 114 (45.2 bits), Expect = 3.9e-10, Sum P(3) = 3.9e-10
Identities = 44/163 (26%), Positives = 71/163 (43%)
Query: 38 VARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNR 97
+ R+ L + +++I F L L L L N + +IE G F L LE L LN+
Sbjct: 59 IPRNAERLDLDRNNITRITKMDFAGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNK 118
Query: 98 CNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNV 157
L + F + L L+LS+N+++ I G + + L L + IS + D
Sbjct: 119 NKLQVLPELLFQSTPKLTRLDLSENQIQG-IPRKAFRG-ITDVKNLQLDNNHISCIEDGA 176
Query: 158 FANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHL 200
F L L L N + + V T ++ + +L L + HL
Sbjct: 177 FRALRDLEILTLNNNNISRILV--TSFNHMPKIRTLRLHSNHL 217
Score = 77 (32.2 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 47/165 (28%), Positives = 69/165 (41%)
Query: 134 LGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSL 193
L L L +DL + IS L + F+N + L L L+ N L + V G L L L
Sbjct: 771 LSALRHLTLIDLSNNSISMLTNYTFSNMSHLSTLILSYNRLRCIPVHAFNG--LRSLRVL 828
Query: 194 DLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSR- 252
L + + E +F + T L L L NPL D S L+ L++ + + G++R
Sbjct: 829 TLHGNDISS-VPEGSFNDLTSLSHLALGTNPLHC-DCS--LRWLSEWVKAGYKEPGIARC 884
Query: 253 ----------LPANTFHRFTCLQELDISHNPLIDAFTALLSPLES 287
L HRF C +DI N + L SP ++
Sbjct: 885 SSPEPMADRLLLTTPTHRFQCKGPVDI--NIVAKCNACLSSPCKN 927
Score = 62 (26.9 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 20/64 (31%), Positives = 30/64 (46%)
Query: 315 LILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLH 374
L L N + + F L +L VL L + ++ + F + LE LRL+ N L
Sbjct: 66 LDLDRNNITRITKMDFAGLKNLRVLHLEDNQVSVIERGAFQD---LKQLERLRLNKNKLQ 122
Query: 375 VLPD 378
VLP+
Sbjct: 123 VLPE 126
Score = 55 (24.4 bits), Expect = 4.7e-14, Sum P(3) = 4.7e-14
Identities = 27/125 (21%), Positives = 43/125 (34%)
Query: 418 DLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANN 477
D+ EL L GN L +P I L F+N ++++L L+ N
Sbjct: 753 DVTELYLEGNHLTAVPR---ELSALRHLTLIDLSNNSISMLTNYTFSNMSHLSTLILSYN 809
Query: 478 NLSMTSELSFQFXXXXXXXXXXXXXXXXXTHISPTVLRHNRAITSIKLVGNPWKCDCNIA 537
L +F S L +++ + L NP CDC++
Sbjct: 810 RLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLT---SLSHLALGTNPLHCDCSLR 866
Query: 538 DMWEW 542
+ EW
Sbjct: 867 WLSEW 871
>UNIPROTKB|J3KNP3 [details] [associations]
symbol:SLIT3 "Slit homolog 3 protein" species:9606 "Homo
sapiens" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005576
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 Pfam:PF12661 Pfam:PF01463 EMBL:AC008409
EMBL:AC008479 EMBL:AC011365 EMBL:AC011389 EMBL:AC027311
EMBL:AC094081 EMBL:AC112165 HGNC:HGNC:11087 ChiTaRS:SLIT3
OMA:SVDCHGL ProteinModelPortal:J3KNP3 Ensembl:ENST00000332966
Uniprot:J3KNP3
Length = 1530
Score = 201 (75.8 bits), Expect = 5.4e-12, P = 5.4e-12
Identities = 87/319 (27%), Positives = 132/319 (41%)
Query: 60 FTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLEL 119
F L L K++LS N ++ + G FD S++ LML L + F L+ LKTL L
Sbjct: 553 FKKLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRVFRGLSGLKTLML 612
Query: 120 SQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENEL-IDLD 178
N + + T L + L L + I+ + F L +NL N +
Sbjct: 613 RSNLIGCVSNDTFA--GLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNCH 670
Query: 179 VATTLGQNLVHLDSLDLSNCHLKGPLS-EDAFVNATKLRTLYLSGNPLSAADLSVALKPL 237
+A LG+ L + N + P ++ + ++ GN S+ LS
Sbjct: 671 LAW-LGKWL-RKRRIVSGNPRCQKPFFLKEIPIQDVAIQDFTCDGNEESSCQLSPRCPEQ 728
Query: 238 TKLHRLSLR--NCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGY 295
+R N GL LP T EL + N L A LS L L +D+
Sbjct: 729 CTCMETVVRCSNKGLRALPRGMPKDVT---ELYLEGNHLT-AVPRELSALRHLTLIDLSN 784
Query: 296 SNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFH 355
+++ ++ TF M+ L TLILS N+L + F L L VL L+ ++ + E F+
Sbjct: 785 NSISMLTNYTFSNMSHLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFN 844
Query: 356 ENYTYPDLEELRLSGNPLH 374
+ L L L NPLH
Sbjct: 845 D---LTSLSHLALGTNPLH 860
Score = 197 (74.4 bits), Expect = 6.9e-12, Sum P(2) = 6.9e-12
Identities = 86/361 (23%), Positives = 155/361 (42%)
Query: 19 LITINLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLR 77
L ++L N + +E GAF + L L + + L + F + L +LDLS N ++
Sbjct: 87 LRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDLSENQIQ 146
Query: 78 IIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNL 137
I F +T ++ L L+ +++ I AF L L+ L L+ N + S I T ++
Sbjct: 147 GIPRKAFRGITDVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNI-SRILVTS-FNHM 204
Query: 138 GKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSN 197
K+ TL L + + ++ + WLR + + G N+ + +
Sbjct: 205 PKIRTLRLHSNHLY-CDCHLAWLSDWLRQRRTVGQFTLCMAPVHLRGFNVADVQKKEYV- 262
Query: 198 CHLKGPLSEDAFVNATKLRT---LYLSGNPLSAADLSVALKPLTK---LHRLSLRNCGLS 251
C P SE NA + S N + + P + + L +
Sbjct: 263 C--PAPHSEPPSCNANSISCPSPCTCSNNIVDCRGKGLMEIPANLPEGIVEIRLEQNSIK 320
Query: 252 RLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTS 311
+PA F ++ L+ +DIS N + D L+SL L + + + I + F + S
Sbjct: 321 AIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIVKGLFDGLVS 380
Query: 312 LKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGN 371
L+ L+L+ NK+ L FQ+L +L++L L + L +++ +F ++ L L+ N
Sbjct: 381 LQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAP---LQSIQTLHLAQN 437
Query: 372 P 372
P
Sbjct: 438 P 438
Score = 165 (63.1 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 73/312 (23%), Positives = 140/312 (44%)
Query: 42 LLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLT 101
++ + +++ ++ I FT L ++D+S N + I P F L SL L+L +T
Sbjct: 309 IVEIRLEQNSIKAIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKIT 368
Query: 102 YISPSAFDNLNHLKTLELSQNKLKS-HIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFAN 160
I FD L L+ L L+ NK+ ++ L NL L D + IS +FA
Sbjct: 369 EIVKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISK---GLFAP 425
Query: 161 NTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLS-EDAFVNATKLRTLY 219
++ L+LA+N + D + + + ++ S P + ++ K +
Sbjct: 426 LQSIQTLHLAQNPFV-CDCHLKWLADYLQDNPIETSGARCSSPRRLANKRISQIKSKKFR 484
Query: 220 LSGNP-----LSAA---DLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISH 271
SG+ S+ DL K + + N L R+P++ T L+ L+ +
Sbjct: 485 CSGSEDYRSRFSSECFMDLVCPEKCRCEGTIVDCSNQKLVRIPSHLPEYVTDLR-LNDNE 543
Query: 272 NPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQ 331
+++A T + L +L +++ + ++ + F S++ L+L+GN+LET+ +F+
Sbjct: 544 VSVLEA-TGIFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRVFR 602
Query: 332 NLTHLSVLELNN 343
L+ L L L +
Sbjct: 603 GLSGLKTLMLRS 614
Score = 151 (58.2 bits), Expect = 4.8e-14, Sum P(3) = 4.8e-14
Identities = 44/132 (33%), Positives = 67/132 (50%)
Query: 18 GLITINLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPL 76
G++ I L N I+ + GAF + L + + + +S I P F L +L L L GN +
Sbjct: 308 GIVEIRLEQNSIKAIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKI 367
Query: 77 RIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGN 136
I G+FD L SL+ L+LN + + + F +L +L L L NKL++ I L
Sbjct: 368 TEIVKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQT-ISKGL-FAP 425
Query: 137 LGKLDTLDLRQS 148
L + TL L Q+
Sbjct: 426 LQSIQTLHLAQN 437
Score = 141 (54.7 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 86/324 (26%), Positives = 145/324 (44%)
Query: 69 LDLSGNPLRIIEP-GVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSH 127
L L+ N + ++E G+F L +L + L+ + + AFD ++ L L+ N+L++
Sbjct: 537 LRLNDNEVSVLEATGIFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLET- 595
Query: 128 IDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVA--TTL-G 184
+ + G L L TL LR + I + ++ FA + +R L+L +N + + TTL
Sbjct: 596 VHGRVFRG-LSGLKTLMLRSNLIGCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVS 654
Query: 185 QNLVHLDSLDLS-NCHLK--GP-LSEDAFV--NATKLRTLYLSGNPLSAADLSVALKPLT 238
+ ++L S + NCHL G L + V N + +L P+ VA++ T
Sbjct: 655 LSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPFFLKEIPIQ----DVAIQDFT 710
Query: 239 KLHRLSLRNCGLS-RLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSN 297
+C LS R P + TC++ + N + A + P + E L + ++
Sbjct: 711 -CDGNEESSCQLSPRCP----EQCTCMETVVRCSNKGLRALPRGM-PKDVTE-LYLEGNH 763
Query: 298 LQRISRSTFLKMTSLKTLI-LSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHE 356
L + R L TLI LS N + L + F N++HLS L L+ RL H
Sbjct: 764 LTAVPRE--LSALRHLTLIDLSNNSISMLTNYTFSNMSHLSTLILS---YNRLRCIPVHA 818
Query: 357 NYTYPDLEELRLSGNPLHVLPDST 380
L L L GN + +P+ +
Sbjct: 819 FNGLRSLRVLTLHGNDISSVPEGS 842
Score = 140 (54.3 bits), Expect = 8.2e-06, Sum P(2) = 8.2e-06
Identities = 41/138 (29%), Positives = 62/138 (44%)
Query: 237 LTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYS 296
L L L L + +S + F L+ L ++ N L L L LD+ +
Sbjct: 84 LKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDLSEN 143
Query: 297 NLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHE 356
+Q I R F +T +K L L N + +E G F+ L L +L LNN ++R+ T F+
Sbjct: 144 QIQGIPRKAFRGITDVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTSFNH 203
Query: 357 NYTYPDLEELRLSGNPLH 374
P + LRL N L+
Sbjct: 204 ---MPKIRTLRLHSNHLY 218
Score = 124 (48.7 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 39/117 (33%), Positives = 55/117 (47%)
Query: 17 PGLITINLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNP 75
P L INL+ N I+ V EGAF A S+ L + L ++ + F L+ L L L N
Sbjct: 557 PNLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRVFRGLSGLKTLMLRSNL 616
Query: 76 LRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKS--HIDW 130
+ + F L+S+ L L +T I+P AF L L T+ L N H+ W
Sbjct: 617 IGCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNCHLAW 673
Score = 121 (47.7 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 31/89 (34%), Positives = 46/89 (51%)
Query: 289 EHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTR 348
E LD+ +N+ RI++ F + +L+ L L N++ +E G FQ+L L L LN L
Sbjct: 64 ERLDLDRNNITRITKMDFAGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQV 123
Query: 349 LNETVFHENYTYPDLEELRLSGNPLHVLP 377
L E +F P L L LS N + +P
Sbjct: 124 LPELLFQST---PKLTRLDLSENQIQGIP 149
Score = 116 (45.9 bits), Expect = 4.8e-14, Sum P(3) = 4.8e-14
Identities = 43/175 (24%), Positives = 77/175 (44%)
Query: 218 LYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDA 277
L L+ N +S + + K L L +++L N + + F +QEL ++ N L
Sbjct: 537 LRLNDNEVSVLEATGIFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETV 596
Query: 278 FTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLS 337
+ L L+ L + + + +S TF ++S++ L L N++ T+ G F L LS
Sbjct: 597 HGRVFRGLSGLKTLMLRSNLIGCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLS 656
Query: 338 VLELNNCGLTRLNETVFHENYTYPDLEELRL-SGNPLHVLPDSTKQYSMRTIPTQ 391
+ L L+ H + L + R+ SGNP P K+ ++ + Q
Sbjct: 657 TINL----LSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQ 707
Score = 115 (45.5 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 40/159 (25%), Positives = 64/159 (40%)
Query: 419 LEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNN 478
LE LRL+ N L VLP +I +P F ++ +L L NN+
Sbjct: 111 LERLRLNKNKLQVLP--ELLFQSTPKLTRLDLSENQIQGIPRKAFRGITDVKNLQLDNNH 168
Query: 479 LSMTSELSFQFXXXXXXXXXXXXXXXXXTHISPTVLRHNRAITSIKLVGNPWKCDCNIAD 538
+S + +F+ + I T H I +++L N CDC++A
Sbjct: 169 ISCIEDGAFR---ALRDLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAW 225
Query: 539 MWEWATREKGDIGVLVGSTTPTEI-GFG-ASRKKKGLVC 575
+ +W R++ +G P + GF A +KK VC
Sbjct: 226 LSDWL-RQRRTVGQFTLCMAPVHLRGFNVADVQKKEYVC 263
Score = 114 (45.2 bits), Expect = 3.9e-10, Sum P(3) = 3.9e-10
Identities = 44/163 (26%), Positives = 71/163 (43%)
Query: 38 VARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNR 97
+ R+ L + +++I F L L L L N + +IE G F L LE L LN+
Sbjct: 59 IPRNAERLDLDRNNITRITKMDFAGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNK 118
Query: 98 CNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNV 157
L + F + L L+LS+N+++ I G + + L L + IS + D
Sbjct: 119 NKLQVLPELLFQSTPKLTRLDLSENQIQG-IPRKAFRG-ITDVKNLQLDNNHISCIEDGA 176
Query: 158 FANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHL 200
F L L L N + + V T ++ + +L L + HL
Sbjct: 177 FRALRDLEILTLNNNNISRILV--TSFNHMPKIRTLRLHSNHL 217
Score = 62 (26.9 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 20/64 (31%), Positives = 30/64 (46%)
Query: 315 LILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLH 374
L L N + + F L +L VL L + ++ + F + LE LRL+ N L
Sbjct: 66 LDLDRNNITRITKMDFAGLKNLRVLHLEDNQVSVIERGAFQD---LKQLERLRLNKNKLQ 122
Query: 375 VLPD 378
VLP+
Sbjct: 123 VLPE 126
Score = 55 (24.4 bits), Expect = 4.8e-14, Sum P(3) = 4.8e-14
Identities = 27/125 (21%), Positives = 43/125 (34%)
Query: 418 DLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANN 477
D+ EL L GN L +P I L F+N ++++L L+ N
Sbjct: 753 DVTELYLEGNHLTAVPR---ELSALRHLTLIDLSNNSISMLTNYTFSNMSHLSTLILSYN 809
Query: 478 NLSMTSELSFQFXXXXXXXXXXXXXXXXXTHISPTVLRHNRAITSIKLVGNPWKCDCNIA 537
L +F S L +++ + L NP CDC++
Sbjct: 810 RLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLT---SLSHLALGTNPLHCDCSLR 866
Query: 538 DMWEW 542
+ EW
Sbjct: 867 WLSEW 871
>MGI|MGI:1342286 [details] [associations]
symbol:Flii "flightless I homolog (Drosophila)"
species:10090 "Mus musculus" [GO:0003779 "actin binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=TAS] [GO:0030054 "cell junction" evidence=IEA] [GO:0051014
"actin filament severing" evidence=TAS] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007122 PRINTS:PR00597
PROSITE:PS51450 SMART:SM00262 MGI:MGI:1342286 GO:GO:0007275
GO:GO:0005634 GO:GO:0005737 GO:GO:0005813 GO:GO:0006355
GO:GO:0030036 eggNOG:COG4886 GO:GO:0006351 GO:GO:0005925
GO:GO:0051014 InterPro:IPR007123 PANTHER:PTHR11977 Pfam:PF00626
InterPro:IPR025875 Pfam:PF12799 EMBL:AL596215 CleanEx:MM_FLI1
GeneTree:ENSGT00660000095502 HOGENOM:HOG000016110 OMA:MEEWNED
CTD:2314 HOVERGEN:HBG051627 OrthoDB:EOG4TB49G ChiTaRS:FLII
EMBL:AF142329 EMBL:AF287264 EMBL:BC027744 EMBL:BC032282
IPI:IPI00467104 RefSeq:NP_071292.1 UniGene:Mm.339755
ProteinModelPortal:Q9JJ28 SMR:Q9JJ28 DIP:DIP-47641N
MINT:MINT-4095146 STRING:Q9JJ28 PhosphoSite:Q9JJ28 PaxDb:Q9JJ28
PRIDE:Q9JJ28 Ensembl:ENSMUST00000002889 GeneID:14248 KEGG:mmu:14248
UCSC:uc007jgh.1 InParanoid:Q9JJ28 NextBio:285565 Bgee:Q9JJ28
CleanEx:MM_FLII Genevestigator:Q9JJ28 GermOnline:ENSMUSG00000002812
Uniprot:Q9JJ28
Length = 1271
Score = 219 (82.2 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 98/343 (28%), Positives = 161/343 (46%)
Query: 41 SLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNL 100
SL +L + L + P+ L L L +S N L + G L SL ++ +L
Sbjct: 34 SLRWLKLNRTGLCYL-PEELAALQKLEHLSVSHNHLTTLH-GELSSLPSLRAIVARANSL 91
Query: 101 TYIS-PSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFA 159
P L+ L L+LS N+L + L N + L+L +GI ++P+ +F
Sbjct: 92 KNSGVPDDIFKLDDLSVLDLSHNQLT---ECPRELENAKNMLVLNLSHNGIDSIPNQLFI 148
Query: 160 NNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLS-NCHLKGPLSEDAFVNATKLRTL 218
N T L L+L+EN L L + LVHL +L L+ N L L + + A L+TL
Sbjct: 149 NLTDLLYLDLSENRLESLPPQM---RRLVHLQTLVLNGNPLLHAQLRQLPAMMA--LQTL 203
Query: 219 YLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAF 278
+L + ++L +L+ L+ L + L L+R+P + L+ L++S N + +
Sbjct: 204 HLRNTQRTQSNLPTSLEGLSNLSDVDLSCNDLTRVP-ECLYTLPSLRRLNLSSNQIAE-L 261
Query: 279 TALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLET--LESGLFQNLTHL 336
+ + LE L++ + L + S K+T LK L L+ NKL+ L SG+ + LT L
Sbjct: 262 SLCIDQWVHLETLNLSRNQLTSLP-SAICKLTKLKKLYLNSNKLDFDGLPSGIGK-LTSL 319
Query: 337 SVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDS 379
N L + E++ P L++L L+ N L LP++
Sbjct: 320 EEFMAANNNLELIPESLCR----CPKLKKLVLNKNRLVTLPEA 358
Score = 203 (76.5 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 77/269 (28%), Positives = 126/269 (46%)
Query: 7 VYNDRRNLDNPGLITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTL 66
V +D LD+ L ++L+ N + A+++L L + + I Q F NLT L
Sbjct: 96 VPDDIFKLDD--LSVLDLSHNQLTECPRELENAKNMLVLNLSHNGIDSIPNQLFINLTDL 153
Query: 67 NKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKS 126
LDLS N L + P + L L+ L+LN L + + L+TL L +N ++
Sbjct: 154 LYLDLSENRLESLPPQM-RRLVHLQTLVLNGNPLLHAQLRQLPAMMALQTLHL-RNTQRT 211
Query: 127 HIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQN 186
+ L L L +DL + ++ +P+ ++ + LR LNL+ N++ +L +
Sbjct: 212 QSNLPTSLEGLSNLSDVDLSCNDLTRVPECLYTLPS-LRRLNLSSNQIAELSLCI---DQ 267
Query: 187 LVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLR 246
VHL++L+LS L S A TKL+ LYL+ N L L + LT L
Sbjct: 268 WVHLETLNLSRNQLTSLPS--AICKLTKLKKLYLNSNKLDFDGLPSGIGKLTSLEEFMAA 325
Query: 247 NCGLSRLPANTFHRFTCLQELDISHNPLI 275
N L +P + R L++L ++ N L+
Sbjct: 326 NNNLELIP-ESLCRCPKLKKLVLNKNRLV 353
Score = 181 (68.8 bits), Expect = 6.2e-10, P = 6.2e-10
Identities = 94/356 (26%), Positives = 157/356 (44%)
Query: 22 INLNANPIQPVEGAFLVARSLLYLYMQECTLSKIN-PQFFTNLTTLNKLDLSGNPLRIIE 80
++++ N + + G SL + + +L P L L+ LDLS N L
Sbjct: 61 LSVSHNHLTTLHGELSSLPSLRAIVARANSLKNSGVPDDIFKLDDLSVLDLSHNQLTEC- 119
Query: 81 PGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKL 140
P + ++ L L+ + I F NL L L+LS+N+L+S + L L
Sbjct: 120 PRELENAKNMLVLNLSHNGIDSIPNQLFINLTDLLYLDLSENRLES---LPPQMRRLVHL 176
Query: 141 DTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHL 200
TL L + + + L+ L+L + ++ T+L + L +L +DLS C+
Sbjct: 177 QTLVLNGNPLLHAQLRQLPAMMALQTLHLRNTQRTQSNLPTSL-EGLSNLSDVDLS-CND 234
Query: 201 KGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHR 260
+ E + LR L LS N + A+LS+ + L L+L L+ LP+ +
Sbjct: 235 LTRVPECLYT-LPSLRRLNLSSNQI--AELSLCIDQWVHLETLNLSRNQLTSLPS-AICK 290
Query: 261 FTCLQELDISHNPL-IDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSG 319
T L++L ++ N L D + + L SLE +NL+ I S + LK L+L+
Sbjct: 291 LTKLKKLYLNSNKLDFDGLPSGIGKLTSLEEFMAANNNLELIPES-LCRCPKLKKLVLNK 349
Query: 320 NKLETLESGLFQNLTHLSVLELN-NCGLTR----LNETVFHENYTYPDLEELRLSG 370
N+L TL + LT + VL++ N L + T N + +LRL+G
Sbjct: 350 NRLVTLPEAI-HFLTEIQVLDVRENPSLVMPPKPADRTAEWYNIDFSLQNQLRLAG 404
Score = 179 (68.1 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 100/337 (29%), Positives = 157/337 (46%)
Query: 69 LDLSGNPLRI-IEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKS- 126
+DLSGN + P +TSL +L LNR L Y+ P L L+ L +S N L +
Sbjct: 13 VDLSGNDFKGGYFPENVKAMTSLRWLKLNRTGLCYL-PEELAALQKLEHLSVSHNHLTTL 71
Query: 127 HIDWTLVLGNLGKLDTLDLRQSGISN--LPDNVFANNTWLRNLNLAENELID----LDVA 180
H + L +L L + R + + N +PD++F + L L+L+ N+L + L+ A
Sbjct: 72 HGE----LSSLPSLRAIVARANSLKNSGVPDDIFKLDD-LSVLDLSHNQLTECPRELENA 126
Query: 181 TT-LGQNLVH--LDSL------DLSNCHLKGPLSEDAFVNA-------TKLRTLYLSGNP 224
L NL H +DS+ +L++ L LSE+ + L+TL L+GNP
Sbjct: 127 KNMLVLNLSHNGIDSIPNQLFINLTDL-LYLDLSENRLESLPPQMRRLVHLQTLVLNGNP 185
Query: 225 LSAADLSVALKPLTKLHRLSLRNCGLSRLPANT-FHRFTCLQELDISHNPLIDAFTALLS 283
L A L L + L L LRN ++ T + L ++D+S N L L +
Sbjct: 186 LLHAQLR-QLPAMMALQTLHLRNTQRTQSNLPTSLEGLSNLSDVDLSCNDLTRVPECLYT 244
Query: 284 PLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNN 343
L SL L++ + + +S + L+TL LS N+L +L S + + LT L L LN+
Sbjct: 245 -LPSLRRLNLSSNQIAELSLCID-QWVHLETLNLSRNQLTSLPSAICK-LTKLKKLYLNS 301
Query: 344 CGLTRLNETVFHENY-TYPDLEELRLSGNPLHVLPDS 379
+L+ LEE + N L ++P+S
Sbjct: 302 ---NKLDFDGLPSGIGKLTSLEEFMAANNNLELIPES 335
>UNIPROTKB|Q6ZVD8 [details] [associations]
symbol:PHLPP2 "PH domain leucine-rich repeat-containing
protein phosphatase 2" species:9606 "Homo sapiens" [GO:0046872
"metal ion binding" evidence=IEA] [GO:0001917 "photoreceptor inner
segment" evidence=IEA] [GO:0004722 "protein serine/threonine
phosphatase activity" evidence=IEA] [GO:0006470 "protein
dephosphorylation" evidence=IEA] [GO:0042622 "photoreceptor outer
segment membrane" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR001932 Pfam:PF00481 PROSITE:PS50003
PROSITE:PS51450 SMART:SM00332 GO:GO:0005634 GO:GO:0005737
Reactome:REACT_111102 Reactome:REACT_116125 Reactome:REACT_6900
GO:GO:0016020 GO:GO:0046872 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 GO:GO:0008152 GO:GO:0004721 EMBL:AC009097
Gene3D:3.60.40.10 SUPFAM:SSF81606 KO:K16340 HOGENOM:HOG000115529
EMBL:AB023148 EMBL:BX647823 EMBL:BC129927 EMBL:AK001854
EMBL:AK124678 IPI:IPI00176709 IPI:IPI00477369 IPI:IPI00718931
RefSeq:NP_055835.2 UniGene:Hs.709458 ProteinModelPortal:Q6ZVD8
SMR:Q6ZVD8 IntAct:Q6ZVD8 STRING:Q6ZVD8 PhosphoSite:Q6ZVD8
DMDM:116242711 PRIDE:Q6ZVD8 DNASU:23035 Ensembl:ENST00000356272
Ensembl:ENST00000360429 Ensembl:ENST00000393524
Ensembl:ENST00000568954 GeneID:23035 KEGG:hsa:23035 UCSC:uc002fax.3
UCSC:uc010cgf.3 CTD:23035 GeneCards:GC16M071674 H-InvDB:HIX0013215
H-InvDB:HIX0173315 HGNC:HGNC:29149 HPA:HPA048598 MIM:611066
neXtProt:NX_Q6ZVD8 PharmGKB:PA165450496 InParanoid:Q6ZVD8
OMA:DLSCYSL BindingDB:Q6ZVD8 ChEMBL:CHEMBL1275209 GenomeRNAi:23035
NextBio:44034 ArrayExpress:Q6ZVD8 Bgee:Q6ZVD8 CleanEx:HS_PHLPPL
Genevestigator:Q6ZVD8 GermOnline:ENSG00000040199 Uniprot:Q6ZVD8
Length = 1323
Score = 219 (82.2 bits), Expect = 5.1e-14, P = 5.1e-14
Identities = 126/486 (25%), Positives = 212/486 (43%)
Query: 21 TINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNL---TTLNKLDLSGNPLR 77
T++L+ ++ V ++ + YL ++ + P L + L L+LS N L
Sbjct: 253 TVDLSCYSLEEVPEHLFYSQDITYLNLRHNFMQLERPGGLDTLYKFSQLKGLNLSHNKLG 312
Query: 78 IIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNL 137
+ P + +++L L L+ CN + PS NL +L+TL L N L + + LGNL
Sbjct: 313 LF-PILLCEISTLTELNLS-CNGFHDLPSQIGNLLNLQTLCLDGNFLTTLPE---ELGNL 367
Query: 138 GKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAEN--ELIDLDVATTLGQNLVHLDSLDL 195
+L +L + + S +P+ V+ T L + +A N E+++L V + H+ +DL
Sbjct: 368 QQLSSLGISFNNFSQIPE-VYEKLTMLDRVVMAGNCLEVLNLGVLNRMN----HIKHVDL 422
Query: 196 SNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLH--RLSLRNCGLSRL 253
HLK + E+ N + + L N L+ DLS +L L +LH R LR LS
Sbjct: 423 RMNHLKTMVIENLEGNK-HITHVDLRDNRLTDLDLS-SLCSLEQLHCGRNQLRELTLSGF 480
Query: 254 PANTFH----RFTC---------LQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQR 300
T + R T L LD+S N L++ + +E LD+ Y+ L
Sbjct: 481 SLRTLYASSNRLTAVNVYPVPSLLTFLDLSRN-LLECVPDWACEAKKIEVLDVSYNLLTE 539
Query: 301 ISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTY 360
+ L SL+ L+L N ++ L + L +++ L VL+L + LTRL +T+F +
Sbjct: 540 VP-VRILSSLSLRKLMLGHNHVQNLPT-LVEHIP-LEVLDLQHNALTRLPDTLFSKAL-- 594
Query: 361 PDLEELRLSGNPLHVLPDS-TKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTYPDL 419
+L L S N L LP + T + S+ + N +L + + L
Sbjct: 595 -NLRYLNASANSLESLPSACTGEESLSMLQLLYLTNN-------LLTDQCIPVLVGHLHL 646
Query: 420 EELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNL 479
L L+ N L P K+ +P + N R + +L +NN+
Sbjct: 647 RILHLANNQLQTFPASKLNKLEQLEELNLSGN--KLKTIPTTIANCKR-LHTLVAHSNNI 703
Query: 480 SMTSEL 485
S+ E+
Sbjct: 704 SIFPEI 709
Score = 191 (72.3 bits), Expect = 5.4e-11, P = 5.4e-11
Identities = 94/335 (28%), Positives = 146/335 (43%)
Query: 41 SLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNL 100
SL LY L+ +N +L T LDLS N L + P +E L ++ L
Sbjct: 481 SLRTLYASSNRLTAVNVYPVPSLLTF--LDLSRNLLECV-PDWACEAKKIEVLDVSYNLL 537
Query: 101 TYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFAN 160
T + +L+ L+ L L N H+ L L+ LDL+ + ++ LPD +F+
Sbjct: 538 TEVPVRILSSLS-LRKLMLGHN----HVQNLPTLVEHIPLEVLDLQHNALTRLPDTLFSK 592
Query: 161 NTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYL 220
LR LN + N L L A T ++L L L L+N +L V LR L+L
Sbjct: 593 ALNLRYLNASANSLESLPSACTGEESLSMLQLLYLTN-NLLTDQCIPVLVGHLHLRILHL 651
Query: 221 SGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTA 280
+ N L S L L +L L+L L +P T L L ++H+ I F
Sbjct: 652 ANNQLQTFPAS-KLNKLEQLEELNLSGNKLKTIPT-TIANCKRLHTL-VAHSNNISIFPE 708
Query: 281 LLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLE 340
+L L ++ +D+ ++L I L T L+ L L+GN LE +H++ L+
Sbjct: 709 ILQ-LPQIQFVDLSCNDLTEILIPEALPAT-LQDLDLTGNTNLVLEHKTLDIFSHITTLK 766
Query: 341 LNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHV 375
++ L + TV +++ L E+ N L V
Sbjct: 767 IDQKPLPTTDSTVTSTFWSH-GLAEMAGQRNKLCV 800
>UNIPROTKB|H3BMS5 [details] [associations]
symbol:PHLPP2 "PH domain leucine-rich repeat-containing
protein phosphatase 2" species:9606 "Homo sapiens" [GO:0003824
"catalytic activity" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR001932 Pfam:PF00481 PROSITE:PS51450 SMART:SM00332
GO:GO:0003824 InterPro:IPR003591 SMART:SM00369 GO:GO:0008152
EMBL:AC009097 Gene3D:3.60.40.10 SUPFAM:SSF81606 HGNC:HGNC:29149
ProteinModelPortal:H3BMS5 SMR:H3BMS5 Ensembl:ENST00000567016
Bgee:H3BMS5 Uniprot:H3BMS5
Length = 1358
Score = 219 (82.2 bits), Expect = 5.3e-14, P = 5.3e-14
Identities = 126/486 (25%), Positives = 212/486 (43%)
Query: 21 TINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNL---TTLNKLDLSGNPLR 77
T++L+ ++ V ++ + YL ++ + P L + L L+LS N L
Sbjct: 288 TVDLSCYSLEEVPEHLFYSQDITYLNLRHNFMQLERPGGLDTLYKFSQLKGLNLSHNKLG 347
Query: 78 IIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNL 137
+ P + +++L L L+ CN + PS NL +L+TL L N L + + LGNL
Sbjct: 348 LF-PILLCEISTLTELNLS-CNGFHDLPSQIGNLLNLQTLCLDGNFLTTLPE---ELGNL 402
Query: 138 GKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAEN--ELIDLDVATTLGQNLVHLDSLDL 195
+L +L + + S +P+ V+ T L + +A N E+++L V + H+ +DL
Sbjct: 403 QQLSSLGISFNNFSQIPE-VYEKLTMLDRVVMAGNCLEVLNLGVLNRMN----HIKHVDL 457
Query: 196 SNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLH--RLSLRNCGLSRL 253
HLK + E+ N + + L N L+ DLS +L L +LH R LR LS
Sbjct: 458 RMNHLKTMVIENLEGNK-HITHVDLRDNRLTDLDLS-SLCSLEQLHCGRNQLRELTLSGF 515
Query: 254 PANTFH----RFTC---------LQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQR 300
T + R T L LD+S N L++ + +E LD+ Y+ L
Sbjct: 516 SLRTLYASSNRLTAVNVYPVPSLLTFLDLSRN-LLECVPDWACEAKKIEVLDVSYNLLTE 574
Query: 301 ISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTY 360
+ L SL+ L+L N ++ L + L +++ L VL+L + LTRL +T+F +
Sbjct: 575 VP-VRILSSLSLRKLMLGHNHVQNLPT-LVEHIP-LEVLDLQHNALTRLPDTLFSKAL-- 629
Query: 361 PDLEELRLSGNPLHVLPDS-TKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTYPDL 419
+L L S N L LP + T + S+ + N +L + + L
Sbjct: 630 -NLRYLNASANSLESLPSACTGEESLSMLQLLYLTNN-------LLTDQCIPVLVGHLHL 681
Query: 420 EELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNL 479
L L+ N L P K+ +P + N R + +L +NN+
Sbjct: 682 RILHLANNQLQTFPASKLNKLEQLEELNLSGN--KLKTIPTTIANCKR-LHTLVAHSNNI 738
Query: 480 SMTSEL 485
S+ E+
Sbjct: 739 SIFPEI 744
Score = 191 (72.3 bits), Expect = 5.6e-11, P = 5.6e-11
Identities = 94/335 (28%), Positives = 146/335 (43%)
Query: 41 SLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNL 100
SL LY L+ +N +L T LDLS N L + P +E L ++ L
Sbjct: 516 SLRTLYASSNRLTAVNVYPVPSLLTF--LDLSRNLLECV-PDWACEAKKIEVLDVSYNLL 572
Query: 101 TYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFAN 160
T + +L+ L+ L L N H+ L L+ LDL+ + ++ LPD +F+
Sbjct: 573 TEVPVRILSSLS-LRKLMLGHN----HVQNLPTLVEHIPLEVLDLQHNALTRLPDTLFSK 627
Query: 161 NTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYL 220
LR LN + N L L A T ++L L L L+N +L V LR L+L
Sbjct: 628 ALNLRYLNASANSLESLPSACTGEESLSMLQLLYLTN-NLLTDQCIPVLVGHLHLRILHL 686
Query: 221 SGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTA 280
+ N L S L L +L L+L L +P T L L ++H+ I F
Sbjct: 687 ANNQLQTFPAS-KLNKLEQLEELNLSGNKLKTIPT-TIANCKRLHTL-VAHSNNISIFPE 743
Query: 281 LLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLE 340
+L L ++ +D+ ++L I L T L+ L L+GN LE +H++ L+
Sbjct: 744 ILQ-LPQIQFVDLSCNDLTEILIPEALPAT-LQDLDLTGNTNLVLEHKTLDIFSHITTLK 801
Query: 341 LNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHV 375
++ L + TV +++ L E+ N L V
Sbjct: 802 IDQKPLPTTDSTVTSTFWSH-GLAEMAGQRNKLCV 835
>ZFIN|ZDB-GENE-040219-8 [details] [associations]
symbol:tlr4ba "toll-like receptor 4b, duplicate a"
species:7955 "Danio rerio" [GO:0031663 "lipopolysaccharide-mediated
signaling pathway" evidence=IEA] [GO:0002755 "MyD88-dependent
toll-like receptor signaling pathway" evidence=IEA] [GO:0050707
"regulation of cytokine secretion" evidence=IEA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0034142 "toll-like receptor
4 signaling pathway" evidence=IEA] [GO:0045087 "innate immune
response" evidence=IEA] [GO:0050829 "defense response to
Gram-negative bacterium" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0001875 "lipopolysaccharide receptor
activity" evidence=IEA] [GO:0042116 "macrophage activation"
evidence=IEA] [GO:0046696 "lipopolysaccharide receptor complex"
evidence=IEA] [GO:0004888 "transmembrane signaling receptor
activity" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR000157 InterPro:IPR001611 InterPro:IPR027168
Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450 SMART:SM00255
ZFIN:ZDB-GENE-040219-8 GO:GO:0016021 GO:GO:0007165
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005622 GeneTree:ENSGT00700000104185 SUPFAM:SSF52200
HOVERGEN:HBG018823 PANTHER:PTHR24365:SF9 HOGENOM:HOG000037951
EMBL:BX908770 IPI:IPI00832979 UniGene:Dr.160845 UniGene:Dr.89708
Ensembl:ENSDART00000124036 Uniprot:B8A689
Length = 787
Score = 167 (63.8 bits), Expect = 6.1e-14, Sum P(2) = 6.1e-14
Identities = 70/261 (26%), Positives = 120/261 (45%)
Query: 174 LIDLDVATTLGQNLVHLDSLD-LSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADL-S 231
LI+ + T + L HL +L+ L H P+ + F + KL+ + LS N L S
Sbjct: 293 LINNGLGTLPTKQLSHLHTLEKLEITHNSEPIFAEPFTDLPKLQYVDLSDNQLKIKHCCS 352
Query: 232 VALKPLTKLHRLSLR-NCGLSRLPANTFHRFTCLQELDISHNPLID-AFTALLSPLESLE 289
L +++ L+L N +S + F L+ LD S+ ++ + ++LS L++L
Sbjct: 353 TLLSGTPQINYLNLSLNSEIS-VDVGGFEGLDSLEILDFSYTRVVRIGYLSVLSNLKNLR 411
Query: 290 HLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLE-TLESGLFQNLTHLSVLELNNCGLTR 348
+LD+ YS++ + FL ++SL L ++GN + + +F NLT L L+++ C L
Sbjct: 412 YLDVSYSSVTFSNIFCFLGLSSLNVLKMAGNNFQGNVAKYVFNNLTLLEHLDMSFCHLVE 471
Query: 349 LNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNET 408
L+ + F Y L L + GN L + T + + KN + L +L
Sbjct: 472 LHTSSF--KYLQR-LRHLNVKGNYLIKIDFLTHPNLKQLTSFYVEKNSITAIPLHVLKNL 528
Query: 409 VFHENYTYPDLEELRLSGNPL 429
+ L E LS NP+
Sbjct: 529 PMN-------LSEFDLSFNPI 542
Score = 126 (49.4 bits), Expect = 0.00030, P = 0.00030
Identities = 81/342 (23%), Positives = 145/342 (42%)
Query: 54 KINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNH 113
++ F L+ L LDLS +R IE F + +L L L + Y +P + L +
Sbjct: 28 QLKKTIFPVLSFLRVLDLSRCHIRQIENDAFYNVKNLTTLFLTGNPIIYFAPGCLNTLYN 87
Query: 114 LKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENE 173
L+ L L L+S L + NL KL L++ + I ++ F T +N +L +
Sbjct: 88 LQRLVLVDIGLES---LQLNINNLTKLQELNVGTNYIQSMTLPPFM--TTFKNFSLLDLH 142
Query: 174 LIDLDVATT--------LGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPL 225
++ + T +G+N+ + + + H++ +D ++ +R+ ++S +
Sbjct: 143 ANNISIIRTNHTVVLREIGRNMTLILTWN-PLLHIEPGAFKDVYLRQLDIRSAFVSFSAQ 201
Query: 226 SAADLSVALKPLTKLHRLSLRNCGLSRLPA-NTFH--------RFTCLQELDISHNPLID 276
AA L LH L+++ + N FH C ++S+ L
Sbjct: 202 KAA--------LKALHGLNVKRLIFGKYREDNGFHFVDNDVLDGLCCFNFQEVSYYVLES 253
Query: 277 AFT--ALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLT 334
A T A+ + + + + N+ + F K K L L N L TL + + L+
Sbjct: 254 AKTTIAIFRCMINATRITVKGGNIYEMETVHFHKT---KELYLINNGLGTLPT---KQLS 307
Query: 335 HLSVLELNNCGLTRLNETVFHENYT-YPDLEELRLSGNPLHV 375
HL LE +T +E +F E +T P L+ + LS N L +
Sbjct: 308 HLHTLE--KLEITHNSEPIFAEPFTDLPKLQYVDLSDNQLKI 347
Score = 124 (48.7 bits), Expect = 0.00049, P = 0.00049
Identities = 62/238 (26%), Positives = 107/238 (44%)
Query: 111 LNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDL--RQSGISNLPDNVFANNTWLRNLN 168
L+HL TLE + S + +L KL +DL Q I + + + + LN
Sbjct: 306 LSHLHTLEKLEITHNSEPIFAEPFTDLPKLQYVDLSDNQLKIKHCCSTLLSGTPQINYLN 365
Query: 169 LAENELIDLDVATTLGQNLVHLDSLDLSNCHLK--GPLSEDAFVNATKLRTLYLSGNPLS 226
L+ N I +DV G L L+ LD S + G LS N LR L +S + ++
Sbjct: 366 LSLNSEISVDVGGFEG--LDSLEILDFSYTRVVRIGYLS--VLSNLKNLRYLDVSYSSVT 421
Query: 227 AADLSVALKPLTKLHRLSLR-NCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPL 285
+++ L L+ L+ L + N + F+ T L+ LD+S L++ T+ L
Sbjct: 422 FSNIFCFLG-LSSLNVLKMAGNNFQGNVAKYVFNNLTLLEHLDMSFCHLVELHTSSFKYL 480
Query: 286 ESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLT-HLSVLELN 342
+ L HL++ + L +I T + L + + N + + + +NL +LS +L+
Sbjct: 481 QRLRHLNVKGNYLIKIDFLTHPNLKQLTSFYVEKNSITAIPLHVLKNLPMNLSEFDLS 538
Score = 99 (39.9 bits), Expect = 6.1e-14, Sum P(2) = 6.1e-14
Identities = 33/121 (27%), Positives = 54/121 (44%)
Query: 36 FLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLML 95
F V L L + C + +I F N+ L L L+GNP+ PG + L +L+ L+L
Sbjct: 34 FPVLSFLRVLDLSRCHIRQIENDAFYNVKNLTTLFLTGNPIIYFAPGCLNTLYNLQRLVL 93
Query: 96 NRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPD 155
L + + +NL L+ L + N ++S + + LDL + IS +
Sbjct: 94 VDIGLESLQLN-INNLTKLQELNVGTNYIQS-MTLPPFMTTFKNFSLLDLHANNISIIRT 151
Query: 156 N 156
N
Sbjct: 152 N 152
>MGI|MGI:2685352 [details] [associations]
symbol:Podnl1 "podocan-like 1" species:10090 "Mus musculus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005576 "extracellular
region" evidence=IEA] [GO:0005578 "proteinaceous extracellular
matrix" evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:2685352
GO:GO:0005578 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 SMART:SM00013 GeneTree:ENSGT00600000084286
HSSP:P07359 HOVERGEN:HBG059195 OrthoDB:EOG42V8FX
HOGENOM:HOG000231119 CTD:79883 EMBL:DQ303463 EMBL:BC063764
IPI:IPI00420321 RefSeq:NP_001013402.2 UniGene:Mm.334654
ProteinModelPortal:Q6P3Y9 SMR:Q6P3Y9 PhosphoSite:Q6P3Y9
PRIDE:Q6P3Y9 Ensembl:ENSMUST00000093380 GeneID:244550
KEGG:mmu:244550 UCSC:uc012gha.1 InParanoid:Q6P3Y9 NextBio:386307
Bgee:Q6P3Y9 CleanEx:MM_PODNL1 Genevestigator:Q6P3Y9 Uniprot:Q6P3Y9
Length = 568
Score = 213 (80.0 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 127/446 (28%), Positives = 190/446 (42%)
Query: 8 YNDRRNLDNPGLITINLNANPIQPVEG----AFLVARSLLYLYMQECTLSKINPQFFTNL 63
YN+ L GL T++L++N I EG AF L Y+ LS + PQF
Sbjct: 84 YNELSRLS--GLRTLDLHSNLITS-EGLPDEAFESLNQLENFYVAHNKLS-VAPQFLPR- 138
Query: 64 TTLNKLDLSGNPLRIIEPGVFDPLTSLE--YLMLNRCNLTYISPSAFDNLNHLKTLELSQ 121
+L DL+ N + I P F +L YL NR T + P+ F + TL LS
Sbjct: 139 -SLRVADLAANEVVEIFPLTFGEKPALRSVYLHNNRLRNTGLPPNTFHGSEVITTLSLSS 197
Query: 122 NKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVAT 181
N+L S++ +L L+ L L+ + IS +P + T LR L L N+L D +
Sbjct: 198 NQL-SYLPPSLP----ASLERLHLQNNLISKVPRGALSLQTHLRELYLQHNQLTDSGLDA 252
Query: 182 TLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLH 241
T L L+ LDLS+ L + E + T L L+L N + + +V L L
Sbjct: 253 TTFSKLSSLEYLDLSHNQL-ATVPEG--LPGT-LTILHLGRNCIRHVE-AVRLHKARGLR 307
Query: 242 RLSLRN--CGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQ 299
L L++ G S LP T L L + N L AL P L+ L M ++++
Sbjct: 308 YLLLQHNKLGASALPKGTLRPLRALHTLHLYGNKLERVPPAL--P-RHLQALVMPHNHVA 364
Query: 300 RISRSTFLKMTSLKTLILSGNKLET--LESGLFQNLTHLSVLELNNCGLTRLNE------ 351
+ + +L L L+ N L + + F+ L L L+L LTRL E
Sbjct: 365 ALGARDLVSARALAELNLAYNSLASAHVHPSAFRRLRALRSLDLAGNQLTRLPEGLPASL 424
Query: 352 -TVFHENYTYPDLEELRLSG-NPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETV 409
++ + LE +L+G N L L + + + I W L +L + + +
Sbjct: 425 RSLRLQRNQLRTLEPEQLAGLNKLRELNLAHNRLRVGDIGPGTWHELQALKVLDLSHNEL 484
Query: 410 FHENYTYPD-LEELRLSGNPL-HVLP 433
P+ LEEL L N + HV P
Sbjct: 485 SFVPPDLPEALEELYLQANRISHVGP 510
Score = 186 (70.5 bits), Expect = 5.5e-11, P = 5.5e-11
Identities = 100/347 (28%), Positives = 145/347 (41%)
Query: 22 INLNANPIQPV-EGAFLVARSLLYLYMQ--ECTLSKINPQFFTNLTTLNKLDLSGNPLRI 78
++L N I V GA + L LY+Q + T S ++ F+ L++L LDLS N L
Sbjct: 214 LHLQNNLISKVPRGALSLQTHLRELYLQHNQLTDSGLDATTFSKLSSLEYLDLSHNQLAT 273
Query: 79 IEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLG 138
+ G+ LT L L R + ++ L+ L L NKL + L L
Sbjct: 274 VPEGLPGTLTILH---LGRNCIRHVEAVRLHKARGLRYLLLQHNKLGASALPKGTLRPLR 330
Query: 139 KLDTLDLRQSGISNLPDN--------VFANN-------------TWLRNLNLAENELIDL 177
L TL L + + +P V +N L LNLA N L
Sbjct: 331 ALHTLHLYGNKLERVPPALPRHLQALVMPHNHVAALGARDLVSARALAELNLAYNSLASA 390
Query: 178 DVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPL 237
V + + L L SLDL+ L L E LR+L L N L + L L
Sbjct: 391 HVHPSAFRRLRALRSLDLAGNQLTR-LPEGL---PASLRSLRLQRNQLRTLEPE-QLAGL 445
Query: 238 TKLHRLSLRNCGL--SRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGY 295
KL L+L + L + T+H L+ LD+SHN L +F P E+LE L +
Sbjct: 446 NKLRELNLAHNRLRVGDIGPGTWHELQALKVLDLSHNEL--SFVPPDLP-EALEELYLQA 502
Query: 296 SNLQRISRSTFLKMTSLKTLILSGNKLE--TLESGLFQNLTHLSVLE 340
+ + + FL L+ L L N+L ++ + Q LTHL V++
Sbjct: 503 NRISHVGPEAFLSTPHLRALFLRANRLHMTSIRAEALQGLTHLRVVD 549
Score = 171 (65.3 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 89/321 (27%), Positives = 143/321 (44%)
Query: 69 LDLSGNPLRIIEPGVFDPLT-SLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSH 127
+D +G LRI P D +T + +L L L + + L+ L+TL+L N + S
Sbjct: 51 VDCAGLDLRIF-P---DNITRAARHLSLQNNQLRELPYNELSRLSGLRTLDLHSNLITSE 106
Query: 128 IDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNL 187
+L +L+ + + +S P F + LR +LA NE++++ T G+
Sbjct: 107 GLPDEAFESLNQLENFYVAHNKLSVAPQ--FLPRS-LRVADLAANEVVEI-FPLTFGEKP 162
Query: 188 VHLDSLDLSNCHLKGP-LSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLR 246
L S+ L N L+ L + F + + TL LS N LS S+ P + L RL L+
Sbjct: 163 A-LRSVYLHNNRLRNTGLPPNTFHGSEVITTLSLSSNQLSYLPPSL---PAS-LERLHLQ 217
Query: 247 NCGLSRLPANTFHRFTCLQELDISHNPLIDAF--TALLSPLESLEHLDMGYSNLQRISRS 304
N +S++P T L+EL + HN L D+ S L SLE+LD+ ++ L +
Sbjct: 218 NNLISKVPRGALSLQTHLRELYLQHNQLTDSGLDATTFSKLSSLEYLDLSHNQLATVPEG 277
Query: 305 TFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYP--D 362
L T L L L N + +E+ L L L + +L + + P
Sbjct: 278 --LPGT-LTILHLGRNCIRHVEAVRLHKARGLRYLLLQH---NKLGASALPKGTLRPLRA 331
Query: 363 LEELRLSGNPLHVLPDSTKQY 383
L L L GN L +P + ++
Sbjct: 332 LHTLHLYGNKLERVPPALPRH 352
Score = 150 (57.9 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 87/362 (24%), Positives = 154/362 (42%)
Query: 38 VARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRI--IEPGVFDPLTSLEYLML 95
+ R+ +L +Q L ++ + L+ L LDL N + + F+ L LE +
Sbjct: 65 ITRAARHLSLQNNQLRELPYNELSRLSGLRTLDLHSNLITSEGLPDEAFESLNQLENFYV 124
Query: 96 NRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISN--L 153
L+ ++P L+ +L+ N++ + L G L ++ L + + N L
Sbjct: 125 AHNKLS-VAPQFLPR--SLRVADLAANEVVEI--FPLTFGEKPALRSVYLHNNRLRNTGL 179
Query: 154 PDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNAT 213
P N F + + L+L+ N+L L + +HL + +S +G LS T
Sbjct: 180 PPNTFHGSEVITTLSLSSNQLSYLPPSLPASLERLHLQNNLISKVP-RGALSLQ-----T 233
Query: 214 KLRTLYLSGNPLSAADL-SVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHN 272
LR LYL N L+ + L + L+ L L L + L+ +P T L + N
Sbjct: 234 HLRELYLQHNQLTDSGLDATTFSKLSSLEYLDLSHNQLATVPEGLPGTLTILH---LGRN 290
Query: 273 PLIDAFTALLSPLESLEHLDMGYSNL--QRISRSTFLKMTSLKTLILSGNKLETLESGLF 330
+ L L +L + ++ L + + T + +L TL L GNKLE + L
Sbjct: 291 CIRHVEAVRLHKARGLRYLLLQHNKLGASALPKGTLRPLRALHTLHLYGNKLERVPPALP 350
Query: 331 QNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPL---HVLPDSTKQY-SMR 386
++L L V+ N+ + V + L EL L+ N L HV P + ++ ++R
Sbjct: 351 RHLQAL-VMPHNHVAALGARDLV-----SARALAELNLAYNSLASAHVHPSAFRRLRALR 404
Query: 387 TI 388
++
Sbjct: 405 SL 406
Score = 120 (47.3 bits), Expect = 0.00086, P = 0.00086
Identities = 111/462 (24%), Positives = 185/462 (40%)
Query: 43 LYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTY 102
L L+ T + + F +L L ++ N L + F P SL L +
Sbjct: 96 LDLHSNLITSEGLPDEAFESLNQLENFYVAHNKLSVAPQ--FLP-RSLRVADLAANEVVE 152
Query: 103 ISPSAFDNLNHLKTLELSQNKLKSH-IDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANN 161
I P F L+++ L N+L++ + G+ + TL L + +S LP ++ A+
Sbjct: 153 IFPLTFGEKPALRSVYLHNNRLRNTGLPPNTFHGS-EVITTLSLSSNQLSYLPPSLPAS- 210
Query: 162 TWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGP-LSEDAFVNATKLRTLYL 220
L L+L +N LI L HL L L + L L F + L L L
Sbjct: 211 --LERLHL-QNNLISKVPRGALSLQ-THLRELYLQHNQLTDSGLDATTFSKLSSLEYLDL 266
Query: 221 SGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPL-IDAFT 279
S N L+ + LT LH L RNC + + A H+ L+ L + HN L A
Sbjct: 267 SHNQLATVPEGLP-GTLTILH-LG-RNC-IRHVEAVRLHKARGLRYLLLQHNKLGASALP 322
Query: 280 -ALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSV 338
L PL +L L + + L+R+ + L+ L++ N + L + + L+
Sbjct: 323 KGTLRPLRALHTLHLYGNKLERVPPAL---PRHLQALVMPHNHVAALGARDLVSARALAE 379
Query: 339 LEL--NNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDST---------KQYSMRT 387
L L N+ ++ + F L L L+GN L LP+ ++ +RT
Sbjct: 380 LNLAYNSLASAHVHPSAFRRLRA---LRSLDLAGNQLTRLPEGLPASLRSLRLQRNQLRT 436
Query: 388 IPTQIWKNFDFLVILFILNETVFHENY---TYPDLEELR---LSGNPLHVLPTGNXXXXX 441
+ + + L L + + + + T+ +L+ L+ LS N L +P
Sbjct: 437 LEPEQLAGLNKLRELNLAHNRLRVGDIGPGTWHELQALKVLDLSHNELSFVPPDLPEALE 496
Query: 442 XXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNLSMTS 483
+I ++ P F +T ++ +L L N L MTS
Sbjct: 497 ELYLQAN-----RISHVGPEAFLSTPHLRALFLRANRLHMTS 533
Score = 37 (18.1 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 11/54 (20%), Positives = 23/54 (42%)
Query: 627 AAPSYINMEKLNSKSFLTLGNFGLISVGVIILSAMVYFSFYARHLYRTKQQRIR 680
A P ++ + LG L+S + + Y S + H++ + +R+R
Sbjct: 348 ALPRHLQALVMPHNHVAALGARDLVSARALAELNLAYNSLASAHVHPSAFRRLR 401
>UNIPROTKB|F1P8A1 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005576 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 Pfam:PF00054 SMART:SM00274 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF12661 Pfam:PF01463
GeneTree:ENSGT00700000104083 CTD:9353 KO:K06839 OMA:RHKMFKG
EMBL:AAEX03002614 EMBL:AAEX03002615 EMBL:AAEX03002616
RefSeq:XP_854843.1 ProteinModelPortal:F1P8A1
Ensembl:ENSCAFT00000026343 GeneID:595148 KEGG:cfa:595148
Uniprot:F1P8A1
Length = 1530
Score = 194 (73.4 bits), Expect = 7.3e-14, Sum P(3) = 7.3e-14
Identities = 79/329 (24%), Positives = 144/329 (43%)
Query: 17 PGLIT-INLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGN 74
P IT I L N I+ + GAF + L + + +S++ P F L +LN L L GN
Sbjct: 299 PETITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 358
Query: 75 PLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVL 134
+ + +F+ L SL+ L+LN + + AF +L++L L L NKL++ T
Sbjct: 359 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTF-- 416
Query: 135 GNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLD 194
L + T+ L Q+ P + WL + L N + T + L +
Sbjct: 417 SPLRAIQTMHLAQN-----PFICDCHLKWLADY-LHTNPIETSGARCTSPRRLANKRIGQ 470
Query: 195 LSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLP 254
+ + + E F+ T+ LSG+ ADL+ K + + N L+++P
Sbjct: 471 IKSKKFRCSAKEQYFIPGTEDYRSKLSGDCF--ADLACPEKCRCEGTTVDCSNQKLTKIP 528
Query: 255 ANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKT 314
+ ++T L+ + +++A T + L L ++ + + I F +
Sbjct: 529 DH-IPQYTAELRLNNNEFTVLEA-TGIFKKLPQLRKINFSNNKITDIEEGAFEGAAGVNE 586
Query: 315 LILSGNKLETLESGLFQNLTHLSVLELNN 343
++L+ N+LE ++ +F+ L L L L +
Sbjct: 587 ILLTSNRLENVQHKMFKGLESLKTLMLRS 615
Score = 189 (71.6 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 98/379 (25%), Positives = 153/379 (40%)
Query: 22 INLNANPIQPVEGA-FLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIE 80
++LN N I + F R L L + E +S I F +L L +L L+ N L++
Sbjct: 60 LDLNGNNITRITKTDFAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNHLQLFP 119
Query: 81 PGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKL 140
+F + L L L+ + I AF +K L+L N++ D L L
Sbjct: 120 ELLFLGTSKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRA--LRDL 177
Query: 141 DTLDLRQSGISNLPDNVFANNTWLRNLNLAENELI-DLDVATT---LGQN-LVHLDSLDL 195
+ L L + I+ L F + LR L N L D +A L Q V L + +
Sbjct: 178 EVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCM 237
Query: 196 SNCHLKGPLSEDAFVNATKLRTLYLSGNP-LSAADLSVALKPLTKLHRLSLRNC---GLS 251
HL+G V + R SG+ A SV P ++ +C GL+
Sbjct: 238 GPSHLRGHN-----VAEVQKREFVCSGHQSFMAPSCSVLHCPAACTCSNNIVDCRGKGLT 292
Query: 252 RLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTS 311
+P N T E+ + N + SP + L +D+ + + ++ F + S
Sbjct: 293 EIPTNLPETIT---EIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRS 349
Query: 312 LKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGN 371
L +L+L GNK+ L LF+ L L +L LN + L F + + +L L L N
Sbjct: 350 LNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLH---NLNLLSLYDN 406
Query: 372 PLHVLPDSTKQYSMRTIPT 390
L + T +R I T
Sbjct: 407 KLQTIAKGTFS-PLRAIQT 424
Score = 147 (56.8 bits), Expect = 7.2e-09, Sum P(3) = 7.2e-09
Identities = 85/320 (26%), Positives = 135/320 (42%)
Query: 68 KLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSH 127
+LDL+GN + I F L L L L ++ I AF +L L+ L L++N L+
Sbjct: 59 RLDLNGNNITRITKTDFAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNHLQLF 118
Query: 128 IDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNL 187
+ L LG KL LDL ++ I +P F ++NL L N++ ++ + L
Sbjct: 119 PE-LLFLGT-SKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAF--RAL 174
Query: 188 VHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVA-LKP-LTKLHRLSL 245
L+ L L+N ++ LS +F + KLRT L N L D +A L L + R+ L
Sbjct: 175 RDLEVLTLNNNNITR-LSVASFNHMPKLRTFRLHSNNLYC-DCHLAWLSDWLRQRPRVGL 232
Query: 246 -RNC-GLSRLPANTFHRFTCLQELDISHNPLIDAFTALLS-PLE---SLEHLDMGYSNLQ 299
C G S L + + + H + ++L P S +D L
Sbjct: 233 YTQCMGPSHLRGHNVAEVQKREFVCSGHQSFMAPSCSVLHCPAACTCSNNIVDCRGKGLT 292
Query: 300 RISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYT 359
I + +T ++ L N ++ + G F L ++L+N ++ L F
Sbjct: 293 EIPTNLPETITEIR---LEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQG--- 346
Query: 360 YPDLEELRLSGNPLHVLPDS 379
L L L GN + LP S
Sbjct: 347 LRSLNSLVLYGNKITELPKS 366
Score = 138 (53.6 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 83/359 (23%), Positives = 144/359 (40%)
Query: 22 INLNANPIQPVE--GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRII 79
+ LN N +E G F L + ++ I F +N++ L+ N L +
Sbjct: 538 LRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGAAGVNEILLTSNRLENV 597
Query: 80 EPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGK 139
+ +F L SL+ LML ++ + +F L+ ++ L L N++ + L
Sbjct: 598 QHKMFKGLESLKTLMLRSNRISCVGNDSFIGLSSVRLLSLYDNQIATIAPGAF--DTLHS 655
Query: 140 LDTLDLRQSGISNLPDNVFANNTWLRNLNLAENE--------LIDLDVATTLGQNLVHLD 191
L TL+L + N + WLR + L ++ + Q+ D
Sbjct: 656 LSTLNLLANPF-NCNCYLAWLGEWLRKKRIVTGNPRCQKPYFLKEIPIQDVAIQDFTCDD 714
Query: 192 SLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTK-LHRLSLRNCGL 250
D S+C PLS T L T+ N L V K + + + L L
Sbjct: 715 GNDDSSC---SPLSRCP-TECTCLDTVVRCSNK----GLKVLPKGIPRDVTELYLDGNHF 766
Query: 251 SRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMT 310
+ +P ++ + L +D+S+N + S + L L + Y+ L+ I TF +
Sbjct: 767 TLVPKELYN-YKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLK 825
Query: 311 SLKTLILSGNKLETLESGLFQNLTHLSVLELN------NCGLTRLNETVFHENYTYPDL 363
SL+ L L GN + + G F +L+ LS L + +C + L++ V E Y P +
Sbjct: 826 SLRLLSLHGNDISVVPEGAFSDLSALSHLAIGANPLYCDCNMQWLSDWVKSE-YKEPGI 883
Score = 116 (45.9 bits), Expect = 4.7e-12, Sum P(4) = 4.7e-12
Identities = 51/183 (27%), Positives = 87/183 (47%)
Query: 69 LDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHI 128
+D G LR + + P + E L LN N+T I+ + F L HL+ L+L +NK+ S I
Sbjct: 39 VDCHGLALRSVPRSI--PRNT-ERLDLNGNNITRITKTDFAGLRHLRVLQLMENKI-STI 94
Query: 129 DWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLV 188
+ +L +L+ L L ++ + P+ +F + L L+L+EN++ + G V
Sbjct: 95 ERG-AFQDLKELERLRLNRNHLQLFPELLFLGTSKLYRLDLSENQIQAIPRKAFRGA--V 151
Query: 189 HLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVA-LKPLTKLHRLSLRN 247
+ +L L + + + AF L L L+ N ++ LSVA + KL L +
Sbjct: 152 DIKNLQLDYNQISC-IEDGAFRALRDLEVLTLNNNNITR--LSVASFNHMPKLRTFRLHS 208
Query: 248 CGL 250
L
Sbjct: 209 NNL 211
Score = 115 (45.5 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 31/89 (34%), Positives = 45/89 (50%)
Query: 289 EHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTR 348
E LD+ +N+ RI+++ F + L+ L L NK+ T+E G FQ+L L L LN L
Sbjct: 58 ERLDLNGNNITRITKTDFAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNHLQL 117
Query: 349 LNETVFHENYTYPDLEELRLSGNPLHVLP 377
E +F L L LS N + +P
Sbjct: 118 FPELLFLGT---SKLYRLDLSENQIQAIP 143
Score = 111 (44.1 bits), Expect = 4.1e-05, Sum P(3) = 4.1e-05
Identities = 34/107 (31%), Positives = 49/107 (45%)
Query: 17 PGLITINLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNP 75
P L IN + N I +E GAF A + + + L + + F L +L L L N
Sbjct: 558 PQLRKINFSNNKITDIEEGAFEGAAGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNR 617
Query: 76 LRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQN 122
+ + F L+S+ L L + I+P AFD L+ L TL L N
Sbjct: 618 ISCVGNDSFIGLSSVRLLSLYDNQIATIAPGAFDTLHSLSTLNLLAN 664
Score = 108 (43.1 bits), Expect = 4.7e-12, Sum P(4) = 4.7e-12
Identities = 31/130 (23%), Positives = 62/130 (47%)
Query: 243 LSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRIS 302
+ L + +P F + L+ +D+S+N + + L SL L + + + +
Sbjct: 305 IRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELP 364
Query: 303 RSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPD 362
+S F + SL+ L+L+ NK+ L FQ+L +L++L L + L + + F
Sbjct: 365 KSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRA--- 421
Query: 363 LEELRLSGNP 372
++ + L+ NP
Sbjct: 422 IQTMHLAQNP 431
Score = 78 (32.5 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 35/180 (19%), Positives = 69/180 (38%)
Query: 369 SGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNET-VFHENYTYPDLEELRLSGN 427
S L +PD QY T ++ N +F V L T +F + P L ++ S N
Sbjct: 520 SNQKLTKIPDHIPQY---TAELRL-NNNEFTV----LEATGIFKK---LPQLRKINFSNN 568
Query: 428 PLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSF 487
+ + G +++ + +F ++ +L L +N +S SF
Sbjct: 569 KITDIEEGAFEGAAGVNEILLTSN--RLENVQHKMFKGLESLKTLMLRSNRISCVGNDSF 626
Query: 488 QFXXXXXXXXXXXXXXXXXTHISPTVLRHNRAITSIKLVGNPWKCDCNIADMWEWATREK 547
I+P +++++ L+ NP+ C+C +A + EW +++
Sbjct: 627 ---IGLSSVRLLSLYDNQIATIAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKR 683
Score = 64 (27.6 bits), Expect = 7.3e-14, Sum P(3) = 7.3e-14
Identities = 18/76 (23%), Positives = 32/76 (42%)
Query: 412 ENYTYPDLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITS 471
E Y Y L + LS N + L N ++ +PP F+ +++
Sbjct: 772 ELYNYKHLTLIDLSNNRISTL--SNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRL 829
Query: 472 LNLANNNLSMTSELSF 487
L+L N++S+ E +F
Sbjct: 830 LSLHGNDISVVPEGAF 845
Score = 60 (26.2 bits), Expect = 7.3e-14, Sum P(3) = 7.3e-14
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 519 AITSIKLVGNPWKCDCNIADMWEWATREKGDIGV 552
A++ + + NP CDCN+ + +W E + G+
Sbjct: 850 ALSHLAIGANPLYCDCNMQWLSDWVKSEYKEPGI 883
Score = 56 (24.8 bits), Expect = 7.7e-05, Sum P(3) = 7.7e-05
Identities = 17/70 (24%), Positives = 29/70 (41%)
Query: 419 LEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNN 478
+ E+RL N + V+P G +I L P+ F R++ SL L N
Sbjct: 302 ITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNN--QISELAPDAFQGLRSLNSLVLYGNK 359
Query: 479 LSMTSELSFQ 488
++ + F+
Sbjct: 360 ITELPKSLFE 369
Score = 53 (23.7 bits), Expect = 9.5e-13, Sum P(3) = 9.5e-13
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 458 LPPNVFNNTRNITSLNLANNNLSMTSELSF 487
L P N +++T ++L+NN +S S SF
Sbjct: 768 LVPKELYNYKHLTLIDLSNNRISTLSNQSF 797
Score = 53 (23.7 bits), Expect = 8.1e-11, Sum P(2) = 8.1e-11
Identities = 9/19 (47%), Positives = 14/19 (73%)
Query: 518 RAITSIKLVGNPWKCDCNI 536
RAI ++ L NP+ CDC++
Sbjct: 420 RAIQTMHLAQNPFICDCHL 438
Score = 41 (19.5 bits), Expect = 6.2e-12, Sum P(3) = 6.2e-12
Identities = 12/46 (26%), Positives = 20/46 (43%)
Query: 526 VGNPWKCDCNIADMWEWATREKGDIGVLVGSTTPTEIGFGASRKKK 571
+G P+ C+C+ + RE G V P + G+ A + K
Sbjct: 1432 LGQPY-CECSSGYTGDSCDREVSCRGERVRDYYPKQQGYAACQTTK 1476
>FB|FBgn0010452 [details] [associations]
symbol:trn "tartan" species:7227 "Drosophila melanogaster"
[GO:0005886 "plasma membrane" evidence=NAS] [GO:0007155 "cell
adhesion" evidence=NAS] [GO:0007424 "open tracheal system
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=TAS] [GO:0035147 "branch fusion, open tracheal system"
evidence=IMP] [GO:0008045 "motor neuron axon guidance"
evidence=IMP] [GO:0007476 "imaginal disc-derived wing
morphogenesis" evidence=IMP] InterPro:IPR001611 PROSITE:PS51450
EMBL:AE014296 GO:GO:0016477 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007155 GO:GO:0008045
InterPro:IPR000372 SMART:SM00013 GO:GO:0007476 GO:GO:0035147
HSSP:Q9BZR6 GeneTree:ENSGT00700000104286 FlyBase:FBgn0010452
CTD:38721 EMBL:AY051439 RefSeq:NP_524055.2 UniGene:Dm.2255
SMR:Q9VU51 MINT:MINT-1567723 STRING:Q9VU51
EnsemblMetazoa:FBtr0075890 GeneID:39491 KEGG:dme:Dmel_CG11280
UCSC:CG11280-RA InParanoid:Q9VU51 OMA:RTFAYQK GenomeRNAi:39491
NextBio:813916 Uniprot:Q9VU51
Length = 737
Score = 214 (80.4 bits), Expect = 7.7e-14, P = 7.7e-14
Identities = 95/377 (25%), Positives = 166/377 (44%)
Query: 16 NPGLITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNP 75
NP + + + +N I+ ++ + L +L + L I + F L ++ L+ N
Sbjct: 58 NPSIQRLVIKSNKIKTIDSSIQFYAELTFLDLSSNHLMTIPQRTFAYQKKLQEVHLNHNK 117
Query: 76 LRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLG 135
+ I F L+++ L L ++ + F L ++ L L +N++ ++D
Sbjct: 118 IGQISNKTFIGLSAVTVLNLRGNQISELHQGTFTPLLKIEELNLGENRI-GYLD-PKAFD 175
Query: 136 NLGKLDTLDLRQSGISNLPDNV-FANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLD 194
L +L L L + ++ +PD V F L L L N L + Q+L L L+
Sbjct: 176 GLSQLRILYLDDNALTTVPDPVIFQAMPSLAELFLGMNTLQSIQADAF--QDLKGLTRLE 233
Query: 195 LSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLP 254
L L+ +S D+F+ +LR L LS N L SV L L +L +LSL +
Sbjct: 234 LKGASLRN-ISHDSFLGLQELRILDLSDNRLDRIP-SVGLSKLVRLEQLSLGQNDFEVIS 291
Query: 255 ANTFHRFTCLQELDISHN-PLIDAFTALLSPLESLEHLDMGYSN-LQRISRSTFLKMTSL 312
F L+ L+++ L T S +LE+L++ + L + ++ L
Sbjct: 292 EGAFMGLKQLKRLEVNGALRLKRVMTGAFSDNGNLEYLNLSSNKMLLEVQEGALSGLSQL 351
Query: 313 KTLILSGNKLETLESGLF--QNLTHLSVLE--LN-NCGLTRLNETVFHENYTYPDLEEL- 366
K ++L N L +L GLF ++L L + E L+ +C + L+ + +N + D+ EL
Sbjct: 352 KHVVLKANALTSLAEGLFPWKDLQTLDLSENPLSCDCRVMWLHNLLVAKNASQDDVSELL 411
Query: 367 -----RLSGNPL-HVLP 377
RL G L H+ P
Sbjct: 412 CEFPERLRGESLRHLNP 428
Score = 186 (70.5 bits), Expect = 8.5e-11, P = 8.5e-11
Identities = 90/343 (26%), Positives = 146/343 (42%)
Query: 89 SLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQS 148
S++ L++ + I S+ L L+LS N L + T KL + L +
Sbjct: 60 SIQRLVIKSNKIKTID-SSIQFYAELTFLDLSSNHLMTIPQRTFAYQK--KLQEVHLNHN 116
Query: 149 GISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDA 208
I + + F + + LNL N++ +L T L+ ++ L+L + G L A
Sbjct: 117 KIGQISNKTFIGLSAVTVLNLRGNQISELHQGTFTP--LLKIEELNLGENRI-GYLDPKA 173
Query: 209 FVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELD 268
F ++LR LYL N L+ V + + L L L L + A+ F L L+
Sbjct: 174 FDGLSQLRILYLDDNALTTVPDPVIFQAMPSLAELFLGMNTLQSIQADAFQDLKGLTRLE 233
Query: 269 ISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESG 328
+ L + L+ L LD+ + L RI K+ L+ L L N E + G
Sbjct: 234 LKGASLRNISHDSFLGLQELRILDLSDNRLDRIPSVGLSKLVRLEQLSLGQNDFEVISEG 293
Query: 329 LFQNLTHLSVLELNNC-GLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQYSMRT 387
F L L LE+N L R+ F +N +LE L LS N + + ++ ++
Sbjct: 294 AFMGLKQLKRLEVNGALRLKRVMTGAFSDN---GNLEYLNLSSNKMLL---EVQEGALSG 347
Query: 388 IPTQIWKNFDFLVILFILNETVFHEN-YTYPDLEELRLSGNPL 429
+ +Q+ K+ V+L T E + + DL+ L LS NPL
Sbjct: 348 L-SQL-KH----VVLKANALTSLAEGLFPWKDLQTLDLSENPL 384
Score = 130 (50.8 bits), Expect = 0.00010, P = 0.00010
Identities = 70/342 (20%), Positives = 131/342 (38%)
Query: 215 LRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPL 274
++ L + N + D S+ +L L L + L +P TF LQE+ ++HN +
Sbjct: 61 IQRLVIKSNKIKTIDSSIQF--YAELTFLDLSSNHLMTIPQRTFAYQKKLQEVHLNHNKI 118
Query: 275 IDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLT 334
L ++ L++ + + + + TF + ++ L L N++ L+ F L+
Sbjct: 119 GQISNKTFIGLSAVTVLNLRGNQISELHQGTFTPLLKIEELNLGENRIGYLDPKAFDGLS 178
Query: 335 HLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLH-VLPDS-----------TKQ 382
L +L L++ LT + + V + P L EL L N L + D+ K
Sbjct: 179 QLRILYLDDNALTTVPDPVIFQ--AMPSLAELFLGMNTLQSIQADAFQDLKGLTRLELKG 236
Query: 383 YSMRTIPTQIWKNFDFLVILFILNETVFHENYT----YPDLEELRLSGNPLHVLPTGNXX 438
S+R I + L IL + + + LE+L L N V+ G
Sbjct: 237 ASLRNISHDSFLGLQELRILDLSDNRLDRIPSVGLSKLVRLEQLSLGQNDFEVISEG-AF 295
Query: 439 XXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSFQFXXXXXXXXX 498
++ + F++ N+ LNL++N + + E+
Sbjct: 296 MGLKQLKRLEVNGALRLKRVMTGAFSDNGNLEYLNLSSNKMLL--EVQEGALSGLSQLKH 353
Query: 499 XXXXXXXXTHISPTVLRHNRAITSIKLVGNPWKCDCNIADMW 540
T ++ + + + ++ L NP CDC + MW
Sbjct: 354 VVLKANALTSLAEGLFPW-KDLQTLDLSENPLSCDCRV--MW 392
>UNIPROTKB|Q2KIF2 [details] [associations]
symbol:LRG1 "Leucine-rich alpha-2-glycoprotein 1"
species:9913 "Bos taurus" [GO:0050873 "brown fat cell
differentiation" evidence=IEA] [GO:0005615 "extracellular space"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
GO:GO:0005615 CTD:116844 eggNOG:COG4886 HOGENOM:HOG000234378
HOVERGEN:HBG000045 OMA:RCAGPEA OrthoDB:EOG4TMR2P GO:GO:0050873
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GeneTree:ENSGT00690000102197 EMBL:DAAA02019605 EMBL:BC112660
IPI:IPI00702820 RefSeq:NP_001039642.1 UniGene:Bt.53757
Ensembl:ENSBTAT00000003618 GeneID:514663 KEGG:bta:514663
InParanoid:Q2KIF2 NextBio:20871452 Uniprot:Q2KIF2
Length = 346
Score = 184 (69.8 bits), Expect = 7.9e-14, Sum P(2) = 7.9e-14
Identities = 79/270 (29%), Positives = 122/270 (45%)
Query: 19 LITINLNANPIQ---PVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNP 75
L+ ++N + I P + + ++L ++ L+++ F + L +L LS N
Sbjct: 43 LVFSSVNGSSISCQPPAQIPHSLPADTIFLAVEFFNLTQLPADFLQGVPNLQELHLSSNR 102
Query: 76 LRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKS-HIDWTLVL 134
L P P+ L+ L L R +LT + P F L TL L N+LK W L
Sbjct: 103 LEDFSPKFLLPVPQLKVLDLTRNSLTGLFPGFFRVSAALCTLVLKGNQLKFLEASW---L 159
Query: 135 GNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLD 194
L L LDL ++ + +LP + N T L L+L+ N+L TL +L+ L+
Sbjct: 160 HGLKALRHLDLSENQLHSLPPGLLENFTDLLTLDLSNNQL------QTLPPDLLR-GPLN 212
Query: 195 LSNCHLKGP----LSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGL 250
L HL+G L E KLR L+L+ N L++ A + L KL L L N L
Sbjct: 213 LERLHLEGNRLQVLGEGLLAPQPKLRYLFLNDNRLASVAAG-AFRGLQKLDMLDLSNNLL 271
Query: 251 SRLPANTFHRF----TCLQE-LDISHNPLI 275
+ +P + L++ DIS+NP I
Sbjct: 272 TTVPTGLWTSLGKAARNLKDGFDISNNPWI 301
Score = 165 (63.1 bits), Expect = 1.1e-11, Sum P(3) = 1.1e-11
Identities = 64/199 (32%), Positives = 90/199 (45%)
Query: 150 ISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAF 209
++ LP + L+ L+L+ N L D L + L LDL+ L G L F
Sbjct: 79 LTQLPADFLQGVPNLQELHLSSNRLEDFSPKFLLP--VPQLKVLDLTRNSLTG-LFPGFF 135
Query: 210 VNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDI 269
+ L TL L GN L + S L L L L L L LP FT L LD+
Sbjct: 136 RVSAALCTLVLKGNQLKFLEASW-LHGLKALRHLDLSENQLHSLPPGLLENFTDLLTLDL 194
Query: 270 SHNPLIDAFTALL-SPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESG 328
S+N L LL PL +LE L + + LQ + L+ L L+ N+L ++ +G
Sbjct: 195 SNNQLQTLPPDLLRGPL-NLERLHLEGNRLQVLGEGLLAPQPKLRYLFLNDNRLASVAAG 253
Query: 329 LFQNLTHLSVLELNNCGLT 347
F+ L L +L+L+N LT
Sbjct: 254 AFRGLQKLDMLDLSNNLLT 272
Score = 163 (62.4 bits), Expect = 1.9e-11, Sum P(3) = 1.9e-11
Identities = 57/182 (31%), Positives = 88/182 (48%)
Query: 17 PGLITINLNANPIQPVEGAFLV-ARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNP 75
P L ++L++N ++ FL+ L L + +L+ + P FF L L L GN
Sbjct: 91 PNLQELHLSSNRLEDFSPKFLLPVPQLKVLDLTRNSLTGLFPGFFRVSAALCTLVLKGNQ 150
Query: 76 LRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLG 135
L+ +E L +L +L L+ L + P +N L TL+LS N+L++ + L+ G
Sbjct: 151 LKFLEASWLHGLKALRHLDLSENQLHSLPPGLLENFTDLLTLDLSNNQLQT-LPPDLLRG 209
Query: 136 NLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDL 195
L L+ L L + + L + + A LR L L +N L VA + L LD LDL
Sbjct: 210 PLN-LERLHLEGNRLQVLGEGLLAPQPKLRYLFLNDNRLAS--VAAGAFRGLQKLDMLDL 266
Query: 196 SN 197
SN
Sbjct: 267 SN 268
Score = 145 (56.1 bits), Expect = 2.4e-09, Sum P(3) = 2.4e-09
Identities = 47/135 (34%), Positives = 68/135 (50%)
Query: 243 LSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRIS 302
L++ L++LPA+ LQEL +S N L D L P+ L+ LD+ ++L +
Sbjct: 72 LAVEFFNLTQLPADFLQGVPNLQELHLSSNRLEDFSPKFLLPVPQLKVLDLTRNSLTGLF 131
Query: 303 RSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPD 362
F +L TL+L GN+L+ LE+ L L L+L+ L L + EN+T D
Sbjct: 132 PGFFRVSAALCTLVLKGNQLKFLEASWLHGLKALRHLDLSENQLHSLPPGLL-ENFT--D 188
Query: 363 LEELRLSGNPLHVLP 377
L L LS N L LP
Sbjct: 189 LLTLDLSNNQLQTLP 203
Score = 124 (48.7 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 45/154 (29%), Positives = 66/154 (42%)
Query: 22 INLNANPIQPVEGAFLVA-RSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIE 80
++L+ N + + L LL L + L + P L +L L GN L+++
Sbjct: 168 LDLSENQLHSLPPGLLENFTDLLTLDLSNNQLQTLPPDLLRGPLNLERLHLEGNRLQVLG 227
Query: 81 PGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHID--WTLVLGNLG 138
G+ P L YL LN L ++ AF L L L+LS N L + WT +LG
Sbjct: 228 EGLLAPQPKLRYLFLNDNRLASVAAGAFRGLQKLDMLDLSNNLLTTVPTGLWT----SLG 283
Query: 139 KLDTLDLRQSGISNLPDNV-FANNTWLRNLNLAE 171
K NL D +NN W+ + NLA+
Sbjct: 284 K---------AARNLKDGFDISNNPWICDQNLAD 308
Score = 117 (46.2 bits), Expect = 3.5e-06, Sum P(3) = 3.5e-06
Identities = 52/171 (30%), Positives = 70/171 (40%)
Query: 204 LSEDAFVNATKLRTLYLSGNPLSAADLSVA-LKPLTKLHRLSLRNCGLSRLPANTFHRFT 262
L D L+ L+LS N L D S L P+ +L L L L+ L F
Sbjct: 82 LPADFLQGVPNLQELHLSSNRLE--DFSPKFLLPVPQLKVLDLTRNSLTGLFPGFFRVSA 139
Query: 263 CLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKL 322
L L + N L + L L++L HLD+ + L + T L TL LS N+L
Sbjct: 140 ALCTLVLKGNQLKFLEASWLHGLKALRHLDLSENQLHSLPPGLLENFTDLLTLDLSNNQL 199
Query: 323 ETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPL 373
+TL L + +L L L L L E + P L L L+ N L
Sbjct: 200 QTLPPDLLRGPLNLERLHLEGNRLQVLGEGLLAPQ---PKLRYLFLNDNRL 247
Score = 103 (41.3 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 39/129 (30%), Positives = 60/129 (46%)
Query: 206 EDAFVNATK-LRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCL 264
E ++++ K LR L LS N L + + L+ T L L L N L LP + L
Sbjct: 155 EASWLHGLKALRHLDLSENQLHSLPPGL-LENFTDLLTLDLSNNQLQTLPPDLLRGPLNL 213
Query: 265 QELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLET 324
+ L + N L LL+P L +L + + L ++ F + L L LS N L T
Sbjct: 214 ERLHLEGNRLQVLGEGLLAPQPKLRYLFLNDNRLASVAAGAFRGLQKLDMLDLSNNLLTT 273
Query: 325 LESGLFQNL 333
+ +GL+ +L
Sbjct: 274 VPTGLWTSL 282
Score = 66 (28.3 bits), Expect = 7.9e-14, Sum P(2) = 7.9e-14
Identities = 9/15 (60%), Positives = 12/15 (80%)
Query: 528 NPWKCDCNIADMWEW 542
NPW CD N+AD++ W
Sbjct: 298 NPWICDQNLADLYRW 312
Score = 38 (18.4 bits), Expect = 1.1e-11, Sum P(3) = 1.1e-11
Identities = 9/17 (52%), Positives = 11/17 (64%)
Query: 419 LEELRLSGNPLHVLPTG 435
L+ L LS N L +PTG
Sbjct: 261 LDMLDLSNNLLTTVPTG 277
>MGI|MGI:2389177 [details] [associations]
symbol:Lrrtm3 "leucine rich repeat transmembrane neuronal 3"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=ISS] [GO:0030054 "cell junction" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:1902004 "positive regulation of
beta-amyloid formation" evidence=ISO;IMP] InterPro:IPR001611
PROSITE:PS51450 MGI:MGI:2389177 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GeneTree:ENSGT00700000104056 HOGENOM:HOG000290681
HOVERGEN:HBG052362 CTD:347731 OMA:PCTYSKS OrthoDB:EOG45TCMT
EMBL:AY182029 EMBL:AK032485 EMBL:AK035773 EMBL:AK035858
EMBL:AK035882 EMBL:AK036366 EMBL:AK163753 EMBL:BC113178
EMBL:BC113784 IPI:IPI00266935 IPI:IPI00607982 RefSeq:NP_848793.1
UniGene:Mm.431318 ProteinModelPortal:Q8BZ81 SMR:Q8BZ81
STRING:Q8BZ81 PhosphoSite:Q8BZ81 PaxDb:Q8BZ81 PRIDE:Q8BZ81
Ensembl:ENSMUST00000105439 GeneID:216028 KEGG:mmu:216028
UCSC:uc007fkk.1 UCSC:uc007fkl.1 InParanoid:Q14CH3 NextBio:374957
Bgee:Q8BZ81 CleanEx:MM_LRRTM3 Genevestigator:Q8BZ81
GermOnline:ENSMUSG00000042846 Uniprot:Q8BZ81
Length = 582
Score = 186 (70.5 bits), Expect = 8.0e-14, Sum P(2) = 8.0e-14
Identities = 73/278 (26%), Positives = 121/278 (43%)
Query: 150 ISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAF 209
+ +P ++ A L+L N L L G N L L L + H+ + E+AF
Sbjct: 52 LQEIPSSISAG---CLGLSLRYNSLQKLKYNQFKGLN--QLTWLYLDHNHISN-IDENAF 105
Query: 210 VNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDI 269
+L+ L LS N +S L+ +P+T L L L L L + F L L +
Sbjct: 106 NGIRRLKELILSSNRISYF-LNNTFRPVTNLRNLDLSYNQLHSLGSEQFRGLRKLLSLHL 164
Query: 270 SHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGL 329
N L + +LE LD+GY+ ++ ++R+ F M LK L L N+ L L
Sbjct: 165 RSNSLRTIPVRIFQDCRNLELLDLGYNRIRSLARNVFAGMIRLKELHLEHNQFSKLNLAL 224
Query: 330 FQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIP 389
F L L L + ++ + +T+ ++T+ L+ L LSGN + + + +P
Sbjct: 225 FPRLVSLQNLYMQWNKISVIGQTM---SWTWSSLQRLDLSGNEIEAFSGPSV---FQCVP 278
Query: 390 TQIWKNFDFLVILFILNETVFHENYTYPDLEELRLSGN 427
N D + FI E + ++ L ++ L+GN
Sbjct: 279 NLQRLNLDSNKLTFIGQEILD----SWISLNDISLAGN 312
Score = 174 (66.3 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 66/256 (25%), Positives = 115/256 (44%)
Query: 18 GLITINLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPL 76
G + ++L N +Q ++ F L +LY+ +S I+ F + L +L LS N +
Sbjct: 62 GCLGLSLRYNSLQKLKYNQFKGLNQLTWLYLDHNHISNIDENAFNGIRRLKELILSSNRI 121
Query: 77 RIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGN 136
F P+T+L L L+ L + F L L +L L N L++ I + +
Sbjct: 122 SYFLNNTFRPVTNLRNLDLSYNQLHSLGSEQFRGLRKLLSLHLRSNSLRT-IP-VRIFQD 179
Query: 137 LGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLS 196
L+ LDL + I +L NVFA L+ L+L N+ L++A L LV L +L +
Sbjct: 180 CRNLELLDLGYNRIRSLARNVFAGMIRLKELHLEHNQFSKLNLA--LFPRLVSLQNLYMQ 237
Query: 197 NCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPAN 256
+ + + + L+ L LSGN + A + + L RL+L + L+ +
Sbjct: 238 WNKIS-VIGQTMSWTWSSLQRLDLSGNEIEAFSGPSVFQCVPNLQRLNLDSNKLTFIGQE 296
Query: 257 TFHRFTCLQELDISHN 272
+ L ++ ++ N
Sbjct: 297 ILDSWISLNDISLAGN 312
Score = 151 (58.2 bits), Expect = 5.4e-10, Sum P(2) = 5.4e-10
Identities = 65/268 (24%), Positives = 116/268 (43%)
Query: 38 VARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNR 97
++ L L ++ +L K+ F L L L L N + I+ F+ + L+ L+L+
Sbjct: 59 ISAGCLGLSLRYNSLQKLKYNQFKGLNQLTWLYLDHNHISNIDENAFNGIRRLKELILSS 118
Query: 98 CNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNV 157
++Y + F + +L+ L+LS N+L S + G L KL +L LR + + +P +
Sbjct: 119 NRISYFLNNTFRPVTNLRNLDLSYNQLHS-LGSEQFRG-LRKLLSLHLRSNSLRTIPVRI 176
Query: 158 FANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRT 217
F + L L+L N + L A + ++ L L L + L+ F L+
Sbjct: 177 FQDCRNLELLDLGYNRIRSL--ARNVFAGMIRLKELHLEHNQFS-KLNLALFPRLVSLQN 233
Query: 218 LYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPA-NTFHRFTCLQELDISHNPLID 276
LY+ N +S +++ + L RL L + + F LQ L++ N L
Sbjct: 234 LYMQWNKISVIGQTMSWT-WSSLQRLDLSGNEIEAFSGPSVFQCVPNLQRLNLDSNKLTF 292
Query: 277 AFTALLSPLESLEHLDMGYSNLQRISRS 304
+L SL + + N+ SR+
Sbjct: 293 IGQEILDSWISLNDISLA-GNIWECSRN 319
Score = 141 (54.7 bits), Expect = 6.6e-09, Sum P(2) = 6.6e-09
Identities = 56/245 (22%), Positives = 105/245 (42%)
Query: 235 KPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMG 294
K L +L L L + +S + N F+ L+EL +S N + P+ +L +LD+
Sbjct: 82 KGLNQLTWLYLDHNHISNIDENAFNGIRRLKELILSSNRISYFLNNTFRPVTNLRNLDLS 141
Query: 295 YSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVF 354
Y+ L + F + L +L L N L T+ +FQ+ +L +L+L + L VF
Sbjct: 142 YNQLHSLGSEQFRGLRKLLSLHLRSNSLRTIPVRIFQDCRNLELLDLGYNRIRSLARNVF 201
Query: 355 HENYTYPDLEELRLSGNPLHVLPDST--KQYSMRTIPTQIWKNFDFLVILFILNETVFHE 412
L+EL L N L + + S++ + Q W ++ +T+
Sbjct: 202 AGMIR---LKELHLEHNQFSKLNLALFPRLVSLQNLYMQ-WNKIS------VIGQTM--- 248
Query: 413 NYTYPDLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSL 472
++T+ L+ L LSGN + +G K+ ++ + ++ ++ +
Sbjct: 249 SWTWSSLQRLDLSGNEIEAF-SGPSVFQCVPNLQRLNLDSNKLTFIGQEILDSWISLNDI 307
Query: 473 NLANN 477
+LA N
Sbjct: 308 SLAGN 312
Score = 114 (45.2 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 59/243 (24%), Positives = 99/243 (40%)
Query: 243 LSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRIS 302
LSLR L +L N F L L + HN + + + + L+ L + + +
Sbjct: 66 LSLRYNSLQKLKYNQFKGLNQLTWLYLDHNHISNIDENAFNGIRRLKELILSSNRISYFL 125
Query: 303 RSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPD 362
+TF +T+L+ L LS N+L +L S F+ L L L L + L + +F + +
Sbjct: 126 NNTFRPVTNLRNLDLSYNQLHSLGSEQFRGLRKLLSLHLRSNSLRTIPVRIFQD---CRN 182
Query: 363 LEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTYPDLEEL 422
LE L L N + L + +R + N F LN +F + L+ L
Sbjct: 183 LELLDLGYNRIRSLARNVFAGMIRLKELHLEHN-QFSK----LNLALFPRLVS---LQNL 234
Query: 423 RLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKID-YLPPNVFNNTRNITSLNLANNNLSM 481
+ N + V+ G +I+ + P+VF N+ LNL +N L+
Sbjct: 235 YMQWNKISVI--GQTMSWTWSSLQRLDLSGNEIEAFSGPSVFQCVPNLQRLNLDSNKLTF 292
Query: 482 TSE 484
+
Sbjct: 293 IGQ 295
Score = 74 (31.1 bits), Expect = 8.0e-14, Sum P(2) = 8.0e-14
Identities = 44/179 (24%), Positives = 69/179 (38%)
Query: 507 THISPTVLRHNRAITSIKLVGNPWKCDCNIADMWEWATREKGDIGVLVGSTTPTEI-GFG 565
T I +L ++ I L GN W+C NI + W KG + +P E+ G
Sbjct: 291 TFIGQEILDSWISLNDISLAGNIWECSRNICSLVNWLRSFKGLRENTIICASPKELQGVN 350
Query: 566 ASRKKKGL-VCYFDIFTTPTRKRPGRELFASTNKTWARYVKEADCPSSKLFRPPRTNSRK 624
K +C TT R R L T K K P PP +
Sbjct: 351 VIDAVKNYSICGKS--TTTERFDLARALPKPTFKPKLPRPKHESKPPL----PPTVGA-- 402
Query: 625 TRAAPSY-INMEKLNSKSFLTLGNFGL-ISVGVIILSAMVYFSFYARHLYRTKQQRIRR 681
T +P ++ E ++ + G+ L +SV VI+L V + Y + + +Q+ + R
Sbjct: 403 TEPSPETDVDTEHISFHKIIA-GSVALFLSVLVILLVMYVSWKRYPASMKQLQQRSLMR 460
>ZFIN|ZDB-GENE-010306-4 [details] [associations]
symbol:slit3 "slit (Drosophila) homolog 3"
species:7955 "Danio rerio" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0030517 "negative regulation of axon extension"
evidence=IGI;IMP] InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 ZFIN:ZDB-GENE-010306-4 GO:GO:0005576
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 GO:GO:0030517 InterPro:IPR006207
PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041 Pfam:PF02210
Pfam:PF12661 InterPro:IPR026906 Pfam:PF13306 Pfam:PF01463
GeneTree:ENSGT00700000104083 EMBL:AL928691 EMBL:BX323583
IPI:IPI00502606 Ensembl:ENSDART00000146299 ArrayExpress:F1RCV3
Bgee:F1RCV3 Uniprot:F1RCV3
Length = 1516
Score = 206 (77.6 bits), Expect = 8.5e-14, Sum P(2) = 8.5e-14
Identities = 91/367 (24%), Positives = 161/367 (43%)
Query: 18 GLITINLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPL 76
G++ I L N I+ + GAF + L + + + +S+I F+ L +L L L GN +
Sbjct: 300 GIVEIRLEQNMIKNIPAGAFSTYKKLKRIDLSKNQISEIAEDAFSGLRSLTSLVLYGNKI 359
Query: 77 RIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGN 136
I G+FD L SL+ L+LN + + + F +L +L L L NKL++ I L
Sbjct: 360 AEIPKGLFDGLVSLQLLLLNANKINCLRVNTFKDLQNLNLLSLYDNKLQT-ISKGL-FAP 417
Query: 137 LGKLDTLDLRQSG------ISNLPDNVFANNTWLRNLNLAE-NELIDLDVATTLGQNLVH 189
L + TL L Q+ + L D +F N + L + ++ G+
Sbjct: 418 LRAIKTLHLAQNPFMCDCHLKWLADYLFDNPIETSGARCSHPRRLANKRISQVKGKKFRC 477
Query: 190 LDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVA-LKPLTKLHRLSLR-- 246
+ D + L G +D V + R G + ++L + + P H LR
Sbjct: 478 TGAEDYRS-RLSGECFQD-LVCPERCRC---EGTVVDCSNLKLTKIPPHLPEHTTDLRLN 532
Query: 247 NCGLSRLPAN-TFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRST 305
+ +S L A F + L+++++S+N L D + L + + LQ +S
Sbjct: 533 DNEISILEATGAFKKLPNLRKINLSNNKLRDIREGAFDGAGGVLELLLTGNKLQSVSGRM 592
Query: 306 FLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEE 365
F + LKTL+L N++ +++ F L+ + +L L + ++ + F+ T L
Sbjct: 593 FKGLIGLKTLMLRSNQISCVDNATFTGLSSVRLLSLYDNRISTIAPGAFN---TLHSLST 649
Query: 366 LRLSGNP 372
+ L NP
Sbjct: 650 INLLSNP 656
Score = 192 (72.6 bits), Expect = 5.0e-11, P = 5.0e-11
Identities = 91/324 (28%), Positives = 136/324 (41%)
Query: 60 FTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLEL 119
F L L K++LS N LR I G FD + L+L L +S F L LKTL L
Sbjct: 545 FKKLPNLRKINLSNNKLRDIREGAFDGAGGVLELLLTGNKLQSVSGRMFKGLIGLKTLML 604
Query: 120 SQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELI-DLD 178
N++ S +D G L + L L + IS + F L +NL N + D
Sbjct: 605 RSNQI-SCVDNATFTG-LSSVRLLSLYDNRISTIAPGAFNTLHSLSTINLLSNPYVCDCH 662
Query: 179 VATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLT 238
+A LG L + N + P AF+ ++ + + A+ +V L
Sbjct: 663 LAW-LGLWLKKTRVVS-GNPRCQKP----AFLKEIPIQDVAMPDFSCDGAEENVCLPSAP 716
Query: 239 KLHR--------LSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEH 290
+ + N GL LP T + T EL + N L+ + L L+ L
Sbjct: 717 RCPESCTCSETVVRCSNRGLRSLP-KTIPKDTT--ELYLEGN-LLTSVPKELPNLKQLTL 772
Query: 291 LDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLN 350
LD+ +++ ++ TF MT L TLILS N++ + F L L +L L+ L+ +
Sbjct: 773 LDLSNNSISHLAPLTFSNMTQLATLILSYNQIRCVPVHAFDGLRSLRLLTLHGNDLSTVP 832
Query: 351 ETVFHENYTYPDLEELRLSGNPLH 374
E F+ L L L NPL+
Sbjct: 833 EGAFNH---LTSLSHLALGANPLY 853
Score = 177 (67.4 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 83/363 (22%), Positives = 162/363 (44%)
Query: 19 LITINLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLR 77
L ++L N I +E GAF + L + + L + F + T L++LDLS N ++
Sbjct: 78 LRVLHLENNQISVIERGAFEGLKQLERIRLNRNRLQVLPELLFQSTTKLSRLDLSENQIQ 137
Query: 78 IIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNL 137
+ F +T+++ L L+ +++ I AF L L+ L L+ N + + I + ++
Sbjct: 138 AVPRKAFRGITTVKNLQLDSNHISCIEDGAFRALRDLEILTLNNNNI-TLIPLSS-FNHM 195
Query: 138 GKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSN 197
KL TL L + + + ++ + WLR + A G N+ + +
Sbjct: 196 PKLRTLRLHSNNL-HCDCHLSWLSDWLRQRRGLAPFTQCMAPAHMRGLNVPDVQKREFV- 253
Query: 198 CHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLH--------RLSLRNCG 249
C GP+ + A ++ T+ + + + K LT++ + L
Sbjct: 254 C--TGPVETEPRSCAPQV-TICPAACTCNNNIVDCRRKGLTEIPANLPEGIVEIRLEQNM 310
Query: 250 LSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKM 309
+ +PA F + L+ +D+S N + + S L SL L + + + I + F +
Sbjct: 311 IKNIPAGAFSTYKKLKRIDLSKNQISEIAEDAFSGLRSLTSLVLYGNKIAEIPKGLFDGL 370
Query: 310 TSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLS 369
SL+ L+L+ NK+ L F++L +L++L L + L +++ +F ++ L L+
Sbjct: 371 VSLQLLLLNANKINCLRVNTFKDLQNLNLLSLYDNKLQTISKGLFAPLRA---IKTLHLA 427
Query: 370 GNP 372
NP
Sbjct: 428 QNP 430
Score = 150 (57.9 bits), Expect = 8.4e-08, Sum P(2) = 8.4e-08
Identities = 45/150 (30%), Positives = 68/150 (45%)
Query: 225 LSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSP 284
++ D S LK L LH L N +S + F L+ + ++ N L L
Sbjct: 67 ITKVDFS-GLKNLRVLH---LENNQISVIERGAFEGLKQLERIRLNRNRLQVLPELLFQS 122
Query: 285 LESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNC 344
L LD+ + +Q + R F +T++K L L N + +E G F+ L L +L LNN
Sbjct: 123 TTKLSRLDLSENQIQAVPRKAFRGITTVKNLQLDSNHISCIEDGAFRALRDLEILTLNNN 182
Query: 345 GLTRLNETVFHENYTYPDLEELRLSGNPLH 374
+T + + F+ P L LRL N LH
Sbjct: 183 NITLIPLSSFNH---MPKLRTLRLHSNNLH 209
Score = 122 (48.0 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 46/167 (27%), Positives = 75/167 (44%)
Query: 38 VARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNR 97
+ R+ L + +++I F+ L L L L N + +IE G F+ L LE + LNR
Sbjct: 50 IPRNAERLDLDRNNITRITKVDFSGLKNLRVLHLENNQISVIERGAFEGLKQLERIRLNR 109
Query: 98 CNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNV 157
L + F + L L+LS+N++++ + G + + L L + IS + D
Sbjct: 110 NRLQVLPELLFQSTTKLSRLDLSENQIQA-VPRKAFRG-ITTVKNLQLDSNHISCIEDGA 167
Query: 158 FANNTWLRNLNLAENE--LIDLDVATTLGQ-NLVHLDSLDLS-NCHL 200
F L L L N LI L + + + L S +L +CHL
Sbjct: 168 FRALRDLEILTLNNNNITLIPLSSFNHMPKLRTLRLHSNNLHCDCHL 214
Score = 112 (44.5 bits), Expect = 0.00085, Sum P(2) = 0.00085
Identities = 42/145 (28%), Positives = 65/145 (44%)
Query: 289 EHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTR 348
E LD+ +N+ RI++ F + +L+ L L N++ +E G F+ L L + LN L
Sbjct: 55 ERLDLDRNNITRITKVDFSGLKNLRVLHLENNQISVIERGAFEGLKQLERIRLNRNRLQV 114
Query: 349 LNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNET 408
L E +F L L LS N + +P + + R I T D I I +
Sbjct: 115 LPELLFQST---TKLSRLDLSENQIQAVP----RKAFRGITTVKNLQLDSNHISCI-EDG 166
Query: 409 VFHENYTYPDLEELRLSGNPLHVLP 433
F DLE L L+ N + ++P
Sbjct: 167 AFR---ALRDLEILTLNNNNITLIP 188
Score = 81 (33.6 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 25/131 (19%), Positives = 50/131 (38%)
Query: 417 PDLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLAN 476
P+L ++ LS N L + G K+ + +F + +L L +
Sbjct: 549 PNLRKINLSNNKLRDIREGAFDGAGGVLELLLTGN--KLQSVSGRMFKGLIGLKTLMLRS 606
Query: 477 NNLSMTSELSFQFXXXXXXXXXXXXXXXXXTHISPTVLRHNRAITSIKLVGNPWKCDCNI 536
N +S +F + I+P ++++I L+ NP+ CDC++
Sbjct: 607 NQISCVDNATF---TGLSSVRLLSLYDNRISTIAPGAFNTLHSLSTINLLSNPYVCDCHL 663
Query: 537 ADMWEWATREK 547
A + W + +
Sbjct: 664 AWLGLWLKKTR 674
Score = 64 (27.6 bits), Expect = 8.5e-14, Sum P(2) = 8.5e-14
Identities = 27/129 (20%), Positives = 44/129 (34%)
Query: 415 TYP-DLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLN 473
T P D EL L GN L +P I +L P F+N + +L
Sbjct: 742 TIPKDTTELYLEGNLLTSVPK---ELPNLKQLTLLDLSNNSISHLAPLTFSNMTQLATLI 798
Query: 474 LANNNLSMTSELSFQFXXXXXXXXXXXXXXXXXTHISPTVLRHNRAITSIKLVGNPWKCD 533
L+ N + +F + + H +++ + L NP CD
Sbjct: 799 LSYNQIRCVPVHAFD---GLRSLRLLTLHGNDLSTVPEGAFNHLTSLSHLALGANPLYCD 855
Query: 534 CNIADMWEW 542
C + + +W
Sbjct: 856 CELRWLSQW 864
Score = 56 (24.8 bits), Expect = 7.5e-10, Sum P(2) = 7.5e-10
Identities = 9/19 (47%), Positives = 14/19 (73%)
Query: 518 RAITSIKLVGNPWKCDCNI 536
RAI ++ L NP+ CDC++
Sbjct: 419 RAIKTLHLAQNPFMCDCHL 437
Score = 50 (22.7 bits), Expect = 2.2e-07, Sum P(3) = 2.2e-07
Identities = 18/66 (27%), Positives = 27/66 (40%)
Query: 419 LEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNN 478
L L L GN + +P G KI+ L N F + +N+ L+L +N
Sbjct: 349 LTSLVLYGNKIAEIPKGLFDGLVSLQLLLLNAN--KINCLRVNTFKDLQNLNLLSLYDNK 406
Query: 479 LSMTSE 484
L S+
Sbjct: 407 LQTISK 412
Score = 41 (19.5 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 463 FNNTRNITSLNLANNNLSMTSELSF 487
F N+ +NL+NN L E +F
Sbjct: 545 FKKLPNLRKINLSNNKLRDIREGAF 569
>ZFIN|ZDB-GENE-080723-57 [details] [associations]
symbol:lingo2 "leucine rich repeat and Ig domain
containing 2" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 ZFIN:ZDB-GENE-080723-57 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101682 HOVERGEN:HBG057546 CTD:158038
EMBL:CR788317 IPI:IPI00911397 RefSeq:NP_001139054.1
UniGene:Dr.111487 Ensembl:ENSDART00000102279 GeneID:564052
KEGG:dre:564052 OMA:STAMGCL NextBio:20885199 Uniprot:B8JIN1
Length = 607
Score = 212 (79.7 bits), Expect = 9.0e-14, P = 9.0e-14
Identities = 90/307 (29%), Positives = 135/307 (43%)
Query: 69 LDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHI 128
LDLS N LRI+ P F L LE L L+ L+ + P++F L++L L N+L +
Sbjct: 61 LDLSKNRLRIVTPQNFSSLLLLEELDLSNNLLSSVEPNSFRAQPRLRSLRLRSNQLT--L 118
Query: 129 DWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLV 188
L L +L LD+ Q+ + L D F LR L L++NEL+ +A L
Sbjct: 119 LPRGALAGLSELTLLDVSQNRLVILLDYGFEEQRRLRVLELSDNELVF--IAPRAFSGLA 176
Query: 189 HLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSV-ALKPLTKLHRLSLRN 247
L SL L C+L + A + L +L L L A+L K L +L L +
Sbjct: 177 SLRSLTLQRCNLS-TVPTHALAHLHGLTSLRL--RDLGIAELQAHTFKGLPRLKHLEVDR 233
Query: 248 CGLSR-LPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTF 306
L P + L L I+H L +++ L L HL++ YS ++ +
Sbjct: 234 WPLLEGFPTSALQGLN-LSTLSITHTNLTSV--PVVTNLLYLTHLNLSYSRIRVLPAGWL 290
Query: 307 LKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEEL 366
M L+ L + L ++E FQ + L +L+L L L +VF L+ L
Sbjct: 291 RGMDRLEVLRVRQANLLSVEPQAFQGASSLRILDLCYNRLATLERSVFPVTEA---LQTL 347
Query: 367 RLSGNPL 373
+ NPL
Sbjct: 348 LIGQNPL 354
Score = 200 (75.5 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 86/301 (28%), Positives = 134/301 (44%)
Query: 30 QPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTS 89
Q EG + RSL + + L + PQ F++L L +LDLS N L +EP F
Sbjct: 49 QVPEGIPIETRSL---DLSKNRLRIVTPQNFSSLLLLEELDLSNNLLSSVEPNSFRAQPR 105
Query: 90 LEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSG 149
L L L LT + A L+ L L++SQN+L +D+ +L L+L +
Sbjct: 106 LRSLRLRSNQLTLLPRGALAGLSELTLLDVSQNRLVILLDYGFE--EQRRLRVLELSDNE 163
Query: 150 ISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAF 209
+ + F+ LR+L L L V T +L L SL L + + L F
Sbjct: 164 LVFIAPRAFSGLASLRSLTLQRCNLST--VPTHALAHLHGLTSLRLRDLGI-AELQAHTF 220
Query: 210 VNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDI 269
+L+ L + PL + AL+ L L LS+ + L+ +P T L L++
Sbjct: 221 KGLPRLKHLEVDRWPLLEGFPTSALQGLN-LSTLSITHTNLTSVPVVT--NLLYLTHLNL 277
Query: 270 SHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGL 329
S++ + L ++ LE L + +NL + F +SL+ L L N+L TLE +
Sbjct: 278 SYSRIRVLPAGWLRGMDRLEVLRVRQANLLSVEPQAFQGASSLRILDLCYNRLATLERSV 337
Query: 330 F 330
F
Sbjct: 338 F 338
Score = 130 (50.8 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 71/265 (26%), Positives = 108/265 (40%)
Query: 17 PGLITINLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNP 75
P L ++ L +N + + GA L L + + L + F L L+LS N
Sbjct: 104 PRLRSLRLRSNQLTLLPRGALAGLSELTLLDVSQNRLVILLDYGFEEQRRLRVLELSDNE 163
Query: 76 LRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQ---NKLKSHIDWTL 132
L I P F L SL L L RCNL+ + A +L+ L +L L +L++H
Sbjct: 164 LVFIAPRAFSGLASLRSLTLQRCNLSTVPTHALAHLHGLTSLRLRDLGIAELQAH----- 218
Query: 133 VLGNLGKLDTLDL-RQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLD 191
L +L L++ R + P + L L++ L + V T NL++L
Sbjct: 219 TFKGLPRLKHLEVDRWPLLEGFPTSALQGLN-LSTLSITHTNLTSVPVVT----NLLYLT 273
Query: 192 SLDLSNCHLKGPLSEDAFVNATKLRTLYL-SGNPLSAADLSVALKPLTKLHRLSLRNCGL 250
L+LS ++ L +L L + N LS A + + L L L L
Sbjct: 274 HLNLSYSRIR-VLPAGWLRGMDRLEVLRVRQANLLSVEPQ--AFQGASSLRILDLCYNRL 330
Query: 251 SRLPANTFHRFTCLQELDISHNPLI 275
+ L + F LQ L I NPL+
Sbjct: 331 ATLERSVFPVTEALQTLLIGQNPLV 355
Score = 121 (47.7 bits), Expect = 0.00073, P = 0.00073
Identities = 53/192 (27%), Positives = 83/192 (43%)
Query: 192 SLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLS 251
SLDLS L+ ++ F + L L LS N LS+ + + + + +L L LR+ L+
Sbjct: 60 SLDLSKNRLR-IVTPQNFSSLLLLEELDLSNNLLSSVEPN-SFRAQPRLRSLRLRSNQLT 117
Query: 252 RLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTS 311
LP + L LD+S N L+ L L++ + L I+ F + S
Sbjct: 118 LLPRGALAGLSELTLLDVSQNRLVILLDYGFEEQRRLRVLELSDNELVFIAPRAFSGLAS 177
Query: 312 LKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGN 371
L++L L L T+ + +L L+ L L + G+ L F P L+ L +
Sbjct: 178 LRSLTLQRCNLSTVPTHALAHLHGLTSLRLRDLGIAELQAHTFKG---LPRLKHLEVDRW 234
Query: 372 PL-HVLPDSTKQ 382
PL P S Q
Sbjct: 235 PLLEGFPTSALQ 246
>UNIPROTKB|F1S8Z0 [details] [associations]
symbol:SLIT1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050919 "negative chemotaxis" evidence=IEA] [GO:0048846
"axon extension involved in axon guidance" evidence=IEA]
[GO:0048495 "Roundabout binding" evidence=IEA] [GO:0040023
"establishment of nucleus localization" evidence=IEA] [GO:0033563
"dorsal/ventral axon guidance" evidence=IEA] [GO:0031290 "retinal
ganglion cell axon guidance" evidence=IEA] [GO:0022028 "tangential
migration from the subventricular zone to the olfactory bulb"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 GO:GO:0005737 GO:GO:0005615 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0008045
PROSITE:PS01186 InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274
SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 InterPro:IPR025875
Pfam:PF12799 GO:GO:0031290 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
Pfam:PF12661 GO:GO:0033563 Pfam:PF01463
GeneTree:ENSGT00700000104083 GO:GO:0022028 GO:GO:0050919
OMA:KCVHGKC EMBL:FP340446 ProteinModelPortal:F1S8Z0
Ensembl:ENSSSCT00000011502 Uniprot:F1S8Z0
Length = 1397
Score = 205 (77.2 bits), Expect = 9.0e-14, Sum P(2) = 9.0e-14
Identities = 84/340 (24%), Positives = 147/340 (43%)
Query: 17 PGLIT-INLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGN 74
P +T I L N I+ + GAF R L + + +S+I P F L +LN L L GN
Sbjct: 172 PETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQISEIAPDAFQGLRSLNSLVLYGN 231
Query: 75 PLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVL 134
+ + GVF L +L+ L+LN + + P AF +L +L L L NK++ T
Sbjct: 232 KITDLPRGVFGGLFTLQLLLLNANKINCVRPDAFQDLQNLSLLSLYDNKIQGLAKGTFT- 290
Query: 135 GNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLD 194
+L + TL L Q+ + N WL + L N + + L +
Sbjct: 291 -SLRAIQTLHLAQNPF------ICDCNLWLADF-LRTNPIETSGARCASPRRLANKRIGQ 342
Query: 195 LSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLP 254
+ + + E F+ T+ L N +D+ K + + + LS++P
Sbjct: 343 IKSKKFRCSGQEQYFIPGTEDYQLNSECN----SDVVCPHKCRCEASVVECSSLKLSKIP 398
Query: 255 ANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKT 314
+ T L+ + +++A T + L L+ +++ + + I F S+
Sbjct: 399 ER-IPQATAELRLNNNEISILEA-TGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSE 456
Query: 315 LILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVF 354
L L+ N+LE++ SG+F+ L L L L N ++ ++ F
Sbjct: 457 LHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSF 496
Score = 167 (63.8 bits), Expect = 4.5e-12, Sum P(2) = 4.5e-12
Identities = 75/301 (24%), Positives = 124/301 (41%)
Query: 47 MQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPS 106
+ E T+ I + F T L L L N + IE G F L LE L LN N++ I S
Sbjct: 4 LSENTIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNISTIPVS 63
Query: 107 AFDNLNHLKTLELSQNKL--KSHIDWTLVLGNLGKLDTLDL--RQSGISNLPD-NVF-AN 160
+F+++ L+T L N L H+ W L + T+ L + SG ++L NV
Sbjct: 64 SFNHMPKLRTFRLHSNHLFCDCHLAWLSQW--LRQRPTIGLFTQCSGPASLRGLNVAEVQ 121
Query: 161 NTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYL 220
+ E + ++ + S + +C KG + A + T + + L
Sbjct: 122 KSEFSCSGQGEAGRVPSCTLSSGSCPAMCACSNGIVDCRGKGLTAIPANLPET-MTEIRL 180
Query: 221 SGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTA 280
N + + A P KL R+ L N +S + + F L L + N + D
Sbjct: 181 ELNGIKSIPPG-AFSPYRKLRRIDLSNNQISEIAPDAFQGLRSLNSLVLYGNKITDLPRG 239
Query: 281 LLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLE 340
+ L +L+ L + + + + F + +L L L NK++ L G F +L + L
Sbjct: 240 VFGGLFTLQLLLLNANKINCVRPDAFQDLQNLSLLSLYDNKIQGLAKGTFTSLRAIQTLH 299
Query: 341 L 341
L
Sbjct: 300 L 300
Score = 163 (62.4 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 73/331 (22%), Positives = 132/331 (39%)
Query: 22 INLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIE 80
I+L+ N I + AF RSL L + ++ + F L TL L L+ N + +
Sbjct: 202 IDLSNNQISEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLFTLQLLLLNANKINCVR 261
Query: 81 PGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHID-WTLVLGNLGK 139
P F L +L L L + ++ F +L ++TL L+QN + W
Sbjct: 262 PDAFQDLQNLSLLSLYDNKIQGLAKGTFTSLRAIQTLHLAQNPFICDCNLWLADFLRTNP 321
Query: 140 LDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNL-VHLDSLDLSNC 198
++T R + L N + + E + N + D + C
Sbjct: 322 IETSGARCASPRRLA-NKRIGQIKSKKFRCSGQEQYFIPGTEDYQLNSECNSDVVCPHKC 380
Query: 199 HLKGPLSEDAFVNATKL--------RTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGL 250
+ + E + + +K+ L L+ N +S + + K LT L +++L N +
Sbjct: 381 RCEASVVECSSLKLSKIPERIPQATAELRLNNNEISILEATGMFKKLTHLKKINLSNNKV 440
Query: 251 SRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMT 310
S + F + EL ++ N L + + L+ L L + + + I +F +
Sbjct: 441 SEIEDGAFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLR 500
Query: 311 SLKTLILSGNKLETLESGLFQNLTHLSVLEL 341
+++ L L N++ T+ G F L LS L L
Sbjct: 501 NVRLLSLYDNQIATISPGAFDTLQALSTLNL 531
Score = 153 (58.9 bits), Expect = 7.3e-07, P = 7.3e-07
Identities = 88/314 (28%), Positives = 124/314 (39%)
Query: 22 INLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIE 80
INL+ N + +E GAF A S+ L++ L I F L L L L N + I
Sbjct: 433 INLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIH 492
Query: 81 PGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKL 140
F L ++ L L + ISP AFD L L TL L N + L LG
Sbjct: 493 NDSFTGLRNVRLLSLYDNQIATISPGAFDTLQALSTLNLLANPFNCNCQ----LAWLG-- 546
Query: 141 DTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDL--DVATTLG---------QNLVH 189
D L R+ N P N +LR + L + D + G Q
Sbjct: 547 DWLRKRKIVTGN-PR--CQNPDFLRQIPLQDVAFPDFRCEEGQEEGGCLPRPQCPQECAC 603
Query: 190 LDSL-DLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNC 248
LD++ SN HL+ L + N T+L YL GN + L L + L N
Sbjct: 604 LDTVVRCSNKHLQA-LPKGIPKNVTEL---YLDGNQFML--VPGQLSTFKYLQLVDLSNN 657
Query: 249 GLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLK 308
+S L ++F + L L +S+N L L SL L + +++ + F
Sbjct: 658 KISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLHGNDISTLQEGIFAD 717
Query: 309 MTSLKTLILSGNKL 322
+TSL L + N L
Sbjct: 718 VTSLSHLAIGANPL 731
Score = 139 (54.0 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 75/313 (23%), Positives = 138/313 (44%)
Query: 70 DLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHID 129
DLS N ++ I F T L+ L L++ ++ I AF L L+ L L+ N + S I
Sbjct: 3 DLSENTIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNI-STIP 61
Query: 130 WTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVH 189
+ ++ KL T L + + ++ + WLR A+ G N+
Sbjct: 62 VSS-FNHMPKLRTFRLHSNHLF-CDCHLAWLSQWLRQRPTIGLFTQCSGPASLRGLNVAE 119
Query: 190 LDSLDLSNCHLKG-----P---LSEDAF--VNATKLRTLYLSGNPLSAADLSVALKPLTK 239
+ + S C +G P LS + + A + G L+A ++ + +T+
Sbjct: 120 VQKSEFS-CSGQGEAGRVPSCTLSSGSCPAMCACSNGIVDCRGKGLTAIPANLP-ETMTE 177
Query: 240 LHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQ 299
+ RL L G+ +P F + L+ +D+S+N + + L SL L + + +
Sbjct: 178 I-RLELN--GIKSIPPGAFSPYRKLRRIDLSNNQISEIAPDAFQGLRSLNSLVLYGNKIT 234
Query: 300 RISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYT 359
+ R F + +L+ L+L+ NK+ + FQ+L +LS+L L + + L + F +
Sbjct: 235 DLPRGVFGGLFTLQLLLLNANKINCVRPDAFQDLQNLSLLSLYDNKIQGLAKGTFT---S 291
Query: 360 YPDLEELRLSGNP 372
++ L L+ NP
Sbjct: 292 LRAIQTLHLAQNP 304
Score = 119 (46.9 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 30/93 (32%), Positives = 49/93 (52%)
Query: 282 LSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLEL 341
LS + L+ +D+ + + +S S+F M+ L TLILS N L+ + FQ L L +L L
Sbjct: 643 LSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSL 702
Query: 342 NNCGLTRLNETVFHENYTYPDLEELRLSGNPLH 374
+ ++ L E +F + L L + NPL+
Sbjct: 703 HGNDISTLQEGIFAD---VTSLSHLAIGANPLY 732
Score = 110 (43.8 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 27/81 (33%), Positives = 44/81 (54%)
Query: 261 FTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGN 320
F LQ +D+S+N + + + + L L + Y+ LQ I F + SL+ L L GN
Sbjct: 646 FKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLHGN 705
Query: 321 KLETLESGLFQNLTHLSVLEL 341
+ TL+ G+F ++T LS L +
Sbjct: 706 DISTLQEGIFADVTSLSHLAI 726
Score = 100 (40.3 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 39/145 (26%), Positives = 63/145 (43%)
Query: 22 INLNANPIQPVE--GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRII 79
+ LN N I +E G F L + + +S+I F ++++L L+ N L I
Sbjct: 408 LRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESI 467
Query: 80 EPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGK 139
G+F L L LML ++ I +F L +++ L L N++ + L
Sbjct: 468 RSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIATISPGAF--DTLQA 525
Query: 140 LDTLDLRQSGISNLPDNVFANNTWL 164
L TL+L ++N P N WL
Sbjct: 526 LSTLNL----LAN-PFNCNCQLAWL 545
Score = 87 (35.7 bits), Expect = 4.5e-12, Sum P(2) = 4.5e-12
Identities = 29/144 (20%), Positives = 56/144 (38%)
Query: 404 ILNETVFHENYTYPDLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVF 463
IL T + T+ L+++ LS N + + G +++ + +F
Sbjct: 417 ILEATGMFKKLTH--LKKINLSNNKVSEIEDGAFEGAASVSELHLTAN--QLESIRSGMF 472
Query: 464 NNTRNITSLNLANNNLSMTSELSFQFXXXXXXXXXXXXXXXXXTHISPTVLRHNRAITSI 523
+ +L L NN +S SF ISP +A++++
Sbjct: 473 RGLDGLRTLMLRNNRISCIHNDSF---TGLRNVRLLSLYDNQIATISPGAFDTLQALSTL 529
Query: 524 KLVGNPWKCDCNIADMWEWATREK 547
L+ NP+ C+C +A + +W + K
Sbjct: 530 NLLANPFNCNCQLAWLGDWLRKRK 553
Score = 64 (27.6 bits), Expect = 9.0e-14, Sum P(2) = 9.0e-14
Identities = 26/125 (20%), Positives = 46/125 (36%)
Query: 418 DLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANN 477
++ EL L GN ++P G KI L + F N +T+L L+ N
Sbjct: 625 NVTELYLDGNQFMLVP-GQLSTFKYLQLVDLSNN--KISSLSNSSFTNMSQLTTLILSYN 681
Query: 478 NLSMTSELSFQFXXXXXXXXXXXXXXXXXTHISPTVLRHNRAITSIKLVGNPWKCDCNIA 537
L L+FQ + + + +++ + + NP CDC++
Sbjct: 682 ALQCIPPLAFQ---GLRSLRLLSLHGNDISTLQEGIFADVTSLSHLAIGANPLYCDCHLR 738
Query: 538 DMWEW 542
+ W
Sbjct: 739 WLSGW 743
>UNIPROTKB|F1NR92 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005576 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 Pfam:PF00054 SMART:SM00274 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR025875 Pfam:PF12799 InterPro:IPR006207
PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041 Pfam:PF01463
GeneTree:ENSGT00700000104083 EMBL:AADN02015249 EMBL:AADN02015250
EMBL:AADN02015251 EMBL:AADN02015252 EMBL:AADN02015253
EMBL:AADN02015254 EMBL:AADN02015255 EMBL:AADN02015256
EMBL:AADN02015257 EMBL:AADN02015258 EMBL:AADN02015259
EMBL:AADN02015260 EMBL:AADN02015261 EMBL:AADN02015262
EMBL:AADN02015263 EMBL:AADN02015264 EMBL:AADN02015265
EMBL:AADN02015266 EMBL:AADN02015267 EMBL:AADN02015268
EMBL:AADN02015269 EMBL:AADN02015270 EMBL:AADN02015271
IPI:IPI00813921 ProteinModelPortal:F1NR92
Ensembl:ENSGALT00000037317 ArrayExpress:F1NR92 Uniprot:F1NR92
Length = 1425
Score = 207 (77.9 bits), Expect = 9.3e-14, Sum P(2) = 9.3e-14
Identities = 81/330 (24%), Positives = 146/330 (44%)
Query: 17 PGLIT-INLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGN 74
P IT I L N I+ + GAF + L + + +S+ P F L +LN L L GN
Sbjct: 192 PETITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISEAAPDAFQGLRSLNSLVLYGN 251
Query: 75 PLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVL 134
+ + G+F+ L SL+ L+LN + + AF +L++L L L NKL+ T+
Sbjct: 252 KITELPKGLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQ-----TIAK 306
Query: 135 GNLGKLDTLD-LRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSL 193
G L + L + ++ P + WL + L N + T + L +
Sbjct: 307 GTFSPLRAIQTLYERHLAQNPFICDCHLKWLADY-LHTNPIETSGARCTSPRRLANKRIG 365
Query: 194 DLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRL 253
+ + + E F+ T+ LSG+ ADL+ K + + N L+++
Sbjct: 366 QIKSKKFRCSAKEQYFIPGTEDYRSKLSGDCF--ADLACPEKCRCEGTTVDCSNQKLNKI 423
Query: 254 PANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLK 313
P + ++T L+ + +++A T + L L +++ + + I F + +
Sbjct: 424 PDH-IPQYTAELRLNNNEFSVLEA-TGIFKKLPQLRKINLSNNKITDIEEGAFDGASGVN 481
Query: 314 TLILSGNKLETLESGLFQNLTHLSVLELNN 343
L+L+ N+LET+ +F+ L L L L +
Sbjct: 482 ELLLTSNRLETVRDKMFKGLESLKTLMLRS 511
Score = 174 (66.3 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 72/303 (23%), Positives = 118/303 (38%)
Query: 47 MQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPS 106
+ E + I + F + L L N + IE G F L LE L LN N+T +S +
Sbjct: 26 LSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLSVA 85
Query: 107 AFDNLNHLKTLELSQNKL--KSHI----DWTLVLGNLGK----LDTLDLRQSGISNLPDN 156
+F+++ L+T L N L H+ DW +G + LR ++ +
Sbjct: 86 SFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPAHLRGHNVAEVQKR 145
Query: 157 VFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLR 216
F + ++ ++ A T N+V +C KG L+E +
Sbjct: 146 EFVCSAGHQSFMAPSCSVLHCPAACTCSNNIV--------DCRGKG-LTEIPTNLPETIT 196
Query: 217 TLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLID 276
+ L N + A P KL R+ L N +S + F L L + N + +
Sbjct: 197 EIRLEQNSIKVIPPG-AFSPYKKLRRIDLSNNQISEAAPDAFQGLRSLNSLVLYGNKITE 255
Query: 277 AFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHL 336
L L SL+ L + + + + F + +L L L NKL+T+ G F L +
Sbjct: 256 LPKGLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAI 315
Query: 337 SVL 339
L
Sbjct: 316 QTL 318
Score = 149 (57.5 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 76/314 (24%), Positives = 130/314 (41%)
Query: 17 PGLITINLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNP 75
P L INL+ N I +E GAF A + L + L + + F L +L L L N
Sbjct: 454 PQLRKINLSNNKITDIEEGAFDGASGVNELLLTSNRLETVRDKMFKGLESLKTLMLRSNR 513
Query: 76 LRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKS--HIDWTLV 133
+ + F L+S+ L L +T ++P +FD L+ L TL L N H+ W
Sbjct: 514 VSCVGNDSFTGLSSVRLLSLYDNQITTVAPGSFDTLHSLSTLNLLANPFNCNCHLAW--- 570
Query: 134 LGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAE---NELIDLDVATTLGQNLVHL 190
LG+ + + +G F ++++ + + ++ D + + L +
Sbjct: 571 LGDWLRKKRI---VTGNPRCQKPYFLKEIPIQDVAIQDFTCDDGNDDNSCSPLSRCPAEC 627
Query: 191 DSLD-LSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVA-LKPLTKLHRLSLRNC 248
LD + C KG + + + LYL GN + ++ K LT + L N
Sbjct: 628 TCLDTVVRCSNKGLKALPKGI-PKDVTELYLDGNQFTLVPKELSNYKHLTLI---DLSNN 683
Query: 249 GLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLK 308
+S L +F T L L +S+N L L+SL L + +++ + F
Sbjct: 684 RISTLSNQSFSNMTQLLTLILSYNRLRCIPARTFDGLKSLRLLSLHGNDISVVPEGAFND 743
Query: 309 MTSLKTLILSGNKL 322
+++L L + N L
Sbjct: 744 LSALSHLAIGANPL 757
Score = 145 (56.1 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 82/330 (24%), Positives = 130/330 (39%)
Query: 71 LSGNPLRIIEP-GVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHID 129
L N + P GV++ L ++ L+ + I AF +K L+L N++ D
Sbjct: 2 LKQNSSHFLPPVGVWNEL-KIKISDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIED 60
Query: 130 WTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELI-DLDVATT---LGQ 185
L L+ L L + I+ L F + LR L N L D +A L Q
Sbjct: 61 GAFRA--LRDLEVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQ 118
Query: 186 N-LVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNP-LSAADLSVALKPLTKLHRL 243
V L + + HL+G K + +G+ A SV P
Sbjct: 119 RPRVGLYTQCMGPAHLRG----HNVAEVQKREFVCSAGHQSFMAPSCSVLHCPAACTCSN 174
Query: 244 SLRNC---GLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQR 300
++ +C GL+ +P N T E+ + N + SP + L +D+ + +
Sbjct: 175 NIVDCRGKGLTEIPTNLPETIT---EIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISE 231
Query: 301 ISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTY 360
+ F + SL +L+L GNK+ L GLF+ L L +L LN + L F + +
Sbjct: 232 AAPDAFQGLRSLNSLVLYGNKITELPKGLFEGLFSLQLLLLNANKINCLRVDAFQDLH-- 289
Query: 361 PDLEELRLSGNPLHVLPDSTKQYSMRTIPT 390
+L L L N L + T +R I T
Sbjct: 290 -NLNLLSLYDNKLQTIAKGTFS-PLRAIQT 317
Score = 119 (46.9 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 33/130 (25%), Positives = 61/130 (46%)
Query: 243 LSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRIS 302
+ L + +P F + L+ +D+S+N + +A L SL L + + + +
Sbjct: 198 IRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISEAAPDAFQGLRSLNSLVLYGNKITELP 257
Query: 303 RSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPD 362
+ F + SL+ L+L+ NK+ L FQ+L +L++L L + L + + F
Sbjct: 258 KGLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQT 317
Query: 363 LEELRLSGNP 372
L E L+ NP
Sbjct: 318 LYERHLAQNP 327
Score = 113 (44.8 bits), Expect = 5.1e-05, Sum P(3) = 5.1e-05
Identities = 32/124 (25%), Positives = 60/124 (48%)
Query: 218 LYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDA 277
L L+ N S + + K L +L +++L N ++ + F + + EL ++ N L
Sbjct: 434 LRLNNNEFSVLEATGIFKKLPQLRKINLSNNKITDIEEGAFDGASGVNELLLTSNRLETV 493
Query: 278 FTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLS 337
+ LESL+ L + + + + +F ++S++ L L N++ T+ G F L LS
Sbjct: 494 RDKMFKGLESLKTLMLRSNRVSCVGNDSFTGLSSVRLLSLYDNQITTVAPGSFDTLHSLS 553
Query: 338 VLEL 341
L L
Sbjct: 554 TLNL 557
Score = 110 (43.8 bits), Expect = 9.8e-08, Sum P(2) = 9.8e-08
Identities = 39/131 (29%), Positives = 60/131 (45%)
Query: 247 NCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHL---DMGYSNLQRISR 303
N GL LP T EL + N FT + L + +HL D+ + + +S
Sbjct: 638 NKGLKALPKGIPKDVT---ELYLDGNQ----FTLVPKELSNYKHLTLIDLSNNRISTLSN 690
Query: 304 STFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDL 363
+F MT L TLILS N+L + + F L L +L L+ ++ + E F++ L
Sbjct: 691 QSFSNMTQLLTLILSYNRLRCIPARTFDGLKSLRLLSLHGNDISVVPEGAFND---LSAL 747
Query: 364 EELRLSGNPLH 374
L + NPL+
Sbjct: 748 SHLAIGANPLY 758
Score = 104 (41.7 bits), Expect = 9.8e-08, Sum P(2) = 9.8e-08
Identities = 35/113 (30%), Positives = 49/113 (43%)
Query: 60 FTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLEL 119
F L L K++LS N + IE G FD + + L+L L + F L LKTL L
Sbjct: 450 FKKLPQLRKINLSNNKITDIEEGAFDGASGVNELLLTSNRLETVRDKMFKGLESLKTLML 509
Query: 120 SQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAEN 172
N++ S + G L + L L + I+ + F L LNL N
Sbjct: 510 RSNRV-SCVGNDSFTG-LSSVRLLSLYDNQITTVAPGSFDTLHSLSTLNLLAN 560
Score = 86 (35.3 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 35/180 (19%), Positives = 73/180 (40%)
Query: 369 SGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNET-VFHENYTYPDLEELRLSGN 427
S L+ +PD QY T ++ N +F V L T +F + P L ++ LS N
Sbjct: 416 SNQKLNKIPDHIPQY---TAELRL-NNNEFSV----LEATGIFKK---LPQLRKINLSNN 464
Query: 428 PLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSF 487
+ + G +++ + +F ++ +L L +N +S SF
Sbjct: 465 KITDIEEGAFDGASGVNELLLTSN--RLETVRDKMFKGLESLKTLMLRSNRVSCVGNDSF 522
Query: 488 QFXXXXXXXXXXXXXXXXXTHISPTVLRHNRAITSIKLVGNPWKCDCNIADMWEWATREK 547
T ++P +++++ L+ NP+ C+C++A + +W +++
Sbjct: 523 ---TGLSSVRLLSLYDNQITTVAPGSFDTLHSLSTLNLLANPFNCNCHLAWLGDWLRKKR 579
Score = 62 (26.9 bits), Expect = 9.3e-14, Sum P(2) = 9.3e-14
Identities = 26/135 (19%), Positives = 46/135 (34%)
Query: 418 DLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANN 477
D+ EL L GN ++P +I L F+N + +L L+ N
Sbjct: 651 DVTELYLDGNQFTLVPK---ELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 707
Query: 478 NLSMTSELSFQFXXXXXXXXXXXXXXXXXTHISPTVLRHNRAITSIKLVGNPWKCDCNIA 537
L +F + + A++ + + NP CDCN+
Sbjct: 708 RLRCIPARTFD---GLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQ 764
Query: 538 DMWEWATREKGDIGV 552
+ +W E + G+
Sbjct: 765 WLSDWVKSEYKEPGI 779
Score = 58 (25.5 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 16/55 (29%), Positives = 26/55 (47%)
Query: 70 DLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKL 124
DLS N ++ I F ++ L L+ ++ I AF L L+ L L+ N +
Sbjct: 25 DLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNI 79
Score = 51 (23.0 bits), Expect = 6.0e-05, Sum P(3) = 6.0e-05
Identities = 15/56 (26%), Positives = 26/56 (46%)
Query: 22 INLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPL 76
+ L+ N I +E GAF R L L + +++++ F ++ L L N L
Sbjct: 48 LQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNL 103
>RGD|1561300 [details] [associations]
symbol:Nyx "nyctalopin" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005622 "intracellular"
evidence=IEA;ISO] [GO:0007601 "visual perception" evidence=IEA;ISO]
[GO:0008150 "biological_process" evidence=ND] RGD:1561300
GO:GO:0007601 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005622 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 CTD:60506 eggNOG:NOG328516 HOGENOM:HOG000230477
HOVERGEN:HBG031762 KO:K08129 OrthoDB:EOG43JC4W
GeneTree:ENSGT00690000101803 EMBL:CH474009 EMBL:DQ393414
IPI:IPI00858403 RefSeq:NP_001094437.1 UniGene:Rn.153545
Ensembl:ENSRNOT00000013382 GeneID:302516 KEGG:rno:302516
UCSC:RGD:1561300 InParanoid:A1XIQ3 NextBio:649772
Genevestigator:A1XIQ3 Uniprot:A1XIQ3
Length = 476
Score = 209 (78.6 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 73/263 (27%), Positives = 114/263 (43%)
Query: 69 LDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHI 128
+DL N LRI+ F L SL L L NL++I+P AF L L L L+ N ++
Sbjct: 62 IDLDRNGLRILGERAFGTLPSLRCLSLRHNNLSFITPGAFKGLPRLAELRLAHNGELRYL 121
Query: 129 DWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLV 188
LG+L LDL + ++P+ + A LR L +N + V L + L
Sbjct: 122 H-VRTFAALGRLRRLDLAACRLFSVPERLLAELPALRELTAFDN--LFRRVPGAL-RGLA 177
Query: 189 HLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNC 248
+L ++ ++ + + +LR+L L N + A A L L L +
Sbjct: 178 NLTHAHFERSRIEA-VASSSLLGMRRLRSLSLQANRVRAVHAG-AFGDCVALEHLLLNDN 235
Query: 249 GLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLK 308
L+ LPA F L+ L++ N L S L LE L + +++ + F
Sbjct: 236 LLASLPAAAFRGLRRLRTLNLGGNALGSVARGWFSDLAELELLYLDRNSITFVEEGAFQN 295
Query: 309 MTSLKTLILSGNKLETLESGLFQ 331
++ L L L+GN+L L FQ
Sbjct: 296 LSGLLALHLNGNRLTVLSWAAFQ 318
Score = 154 (59.3 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 81/280 (28%), Positives = 114/280 (40%)
Query: 95 LNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSG-ISNL 153
L+R L + AF L L+ L L N L S I G L +L L L +G + L
Sbjct: 64 LDRNGLRILGERAFGTLPSLRCLSLRHNNL-SFITPGAFKG-LPRLAELRLAHNGELRYL 121
Query: 154 PDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLD-LSNCHLKGPLSEDAFVNA 212
FA LR L+LA L V L L L L N + P + N
Sbjct: 122 HVRTFAALGRLRRLDLAACRLFS--VPERLLAELPALRELTAFDNLFRRVPGALRGLANL 179
Query: 213 TKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHN 272
T + + + A S +L + +L LSL+ + + A F L+ L ++ N
Sbjct: 180 THA---HFERSRIEAV-ASSSLLGMRRLRSLSLQANRVRAVHAGAFGDCVALEHLLLNDN 235
Query: 273 PLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQN 332
L A L L L++G + L ++R F + L+ L L N + +E G FQN
Sbjct: 236 LLASLPAAAFRGLRRLRTLNLGGNALGSVARGWFSDLAELELLYLDRNSITFVEEGAFQN 295
Query: 333 LTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNP 372
L+ L L LN LT L+ F + L L L NP
Sbjct: 296 LSGLLALHLNGNRLTVLSWAAFQPGFF---LGRLFLFRNP 332
Score = 144 (55.7 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 38/113 (33%), Positives = 61/113 (53%)
Query: 19 LITINLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLR 77
L +++L AN ++ V GAF +L +L + + L+ + F L L L+L GN L
Sbjct: 203 LRSLSLQANRVRAVHAGAFGDCVALEHLLLNDNLLASLPAAAFRGLRRLRTLNLGGNALG 262
Query: 78 IIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDW 130
+ G F L LE L L+R ++T++ AF NL+ L L L+ N+L + + W
Sbjct: 263 SVARGWFSDLAELELLYLDRNSITFVEEGAFQNLSGLLALHLNGNRL-TVLSW 314
Score = 123 (48.4 bits), Expect = 0.00031, P = 0.00031
Identities = 72/266 (27%), Positives = 106/266 (39%)
Query: 21 TINLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGN-PLRI 78
+I+L+ N ++ + E AF SL L ++ LS I P F L L +L L+ N LR
Sbjct: 61 SIDLDRNGLRILGERAFGTLPSLRCLSLRHNNLSFITPGAFKGLPRLAELRLAHNGELRY 120
Query: 79 IEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLG 138
+ F L L L L C L + L L+ L N + + L L
Sbjct: 121 LHVRTFAALGRLRRLDLAACRLFSVPERLLAELPALRELTAFDNLFR-RVPGAL--RGLA 177
Query: 139 KLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNC 198
L +S I + + LR+L+L N + + A G + V L+ L L N
Sbjct: 178 NLTHAHFERSRIEAVASSSLLGMRRLRSLSLQANRVRAVH-AGAFG-DCVALEHL-LLND 234
Query: 199 HLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTF 258
+L L AF +LRTL L GN L + L +L L L ++ + F
Sbjct: 235 NLLASLPAAAFRGLRRLRTLNLGGNALGSVARGW-FSDLAELELLYLDRNSITFVEEGAF 293
Query: 259 HRFTCLQELDISHNPLIDAFTALLSP 284
+ L L ++ N L A P
Sbjct: 294 QNLSGLLALHLNGNRLTVLSWAAFQP 319
>UNIPROTKB|O43300 [details] [associations]
symbol:LRRTM2 "Leucine-rich repeat transmembrane neuronal
protein 2" species:9606 "Homo sapiens" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0042043 "neurexin family protein binding" evidence=IEA]
[GO:0050808 "synapse organization" evidence=IEA] [GO:0060076
"excitatory synapse" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 SMART:SM00013 InterPro:IPR025875
Pfam:PF12799 UniGene:Hs.656653 CleanEx:HS_LRRN2
HOGENOM:HOG000290681 HOVERGEN:HBG052362 EMBL:AY182026 EMBL:AB007876
EMBL:AK291064 EMBL:BC126408 EMBL:BC126410 EMBL:BC143926
IPI:IPI00023576 RefSeq:NP_056379.1 ProteinModelPortal:O43300
SMR:O43300 STRING:O43300 PhosphoSite:O43300 PRIDE:O43300
DNASU:26045 Ensembl:ENST00000274711 GeneID:26045 KEGG:hsa:26045
UCSC:uc011cyz.1 CTD:26045 GeneCards:GC05M138205 HGNC:HGNC:19409
HPA:HPA017323 MIM:610868 neXtProt:NX_O43300 PharmGKB:PA134993038
InParanoid:O43300 OMA:IRQCSMI OrthoDB:EOG4PG60Z GenomeRNAi:26045
NextBio:47883 ArrayExpress:O43300 Bgee:O43300 CleanEx:HS_LRRTM2
Genevestigator:O43300 Uniprot:O43300
Length = 516
Score = 194 (73.4 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 79/256 (30%), Positives = 120/256 (46%)
Query: 135 GNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLD 194
G+LG L LR + I+ L + FA+ + L L+L N++ V Q L L L
Sbjct: 62 GSLG----LSLRHNHITELERDQFASFSQLTWLHLDHNQIST--VKEDAFQGLYKLKELI 115
Query: 195 LSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLP 254
LS+ + L F L+ L LS N LS+ + L KL L LR+ L +P
Sbjct: 116 LSSNKIFY-LPNTTFTQLINLQNLDLSFNQLSSLHPEL-FYGLRKLQTLHLRSNSLRTIP 173
Query: 255 ANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKT 314
F L+ LD+S N L + L L L + ++ L +I+ + FL+++SL T
Sbjct: 174 VRLFWDCRSLEFLDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLRLSSLHT 233
Query: 315 LILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLH 374
L L NK+ L G+ L L+L + ++ TVF T P+L+ L + N L+
Sbjct: 234 LFLQWNKISNLTCGMEWTWGTLEKLDLTGNEIKAIDLTVFE---TMPNLKILLMDNNKLN 290
Query: 375 VLPDSTKQYSMRTIPT 390
L DS S+R++ T
Sbjct: 291 SL-DSKILNSLRSLTT 305
Score = 190 (71.9 bits), Expect = 3.3e-13, Sum P(2) = 3.3e-13
Identities = 73/255 (28%), Positives = 117/255 (45%)
Query: 69 LDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHI 128
L L N + +E F + L +L L+ ++ + AF L LK L LS NK+
Sbjct: 66 LSLRHNHITELERDQFASFSQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLP 125
Query: 129 DWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLV 188
+ T L L LDL + +S+L +F L+ L+L N L + V L +
Sbjct: 126 NTTFT--QLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIPVR--LFWDCR 181
Query: 189 HLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNC 248
L+ LDLS L+ L+ + F KLR L+L N L+ + + L+ L+ LH L L+
Sbjct: 182 SLEFLDLSTNRLRS-LARNGFAGLIKLRELHLEHNQLTKINFAHFLR-LSSLHTLFLQWN 239
Query: 249 GLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLK 308
+S L + L++LD++ N + + + +L+ L M + L +
Sbjct: 240 KISNLTCGMEWTWGTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNNKLNSLDSKILNS 299
Query: 309 MTSLKTLILSGNKLE 323
+ SL T+ LSGN E
Sbjct: 300 LRSLTTVGLSGNLWE 314
Score = 165 (63.1 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 68/250 (27%), Positives = 114/250 (45%)
Query: 93 LMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISN 152
L L ++T + F + + L L L N++ S + G L KL L L + I
Sbjct: 66 LSLRHNHITELERDQFASFSQLTWLHLDHNQI-STVKEDAFQG-LYKLKELILSSNKIFY 123
Query: 153 LPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNA 212
LP+ F L+NL+L+ N+L L G L L +L L + L+ + F +
Sbjct: 124 LPNTTFTQLINLQNLDLSFNQLSSLHPELFYG--LRKLQTLHLRSNSLR-TIPVRLFWDC 180
Query: 213 TKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHN 272
L L LS N L + + L KL L L + L+++ F R + L L + N
Sbjct: 181 RSLEFLDLSTNRLRSLARN-GFAGLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWN 239
Query: 273 PLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQN 332
+ + + +LE LD+ + ++ I + F M +LK L++ NKL +L+S + +
Sbjct: 240 KISNLTCGMEWTWGTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNNKLNSLDSKILNS 299
Query: 333 LTHLSVLELN 342
L L+ + L+
Sbjct: 300 LRSLTTVGLS 309
Score = 162 (62.1 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
Identities = 68/261 (26%), Positives = 120/261 (45%)
Query: 43 LYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTY 102
L L ++ ++++ F + + L L L N + ++ F L L+ L+L+ + Y
Sbjct: 64 LGLSLRHNHITELERDQFASFSQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFY 123
Query: 103 ISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNT 162
+ + F L +L+ L+LS N+L S + L G L KL TL LR + + +P +F +
Sbjct: 124 LPNTTFTQLINLQNLDLSFNQLSS-LHPELFYG-LRKLQTLHLRSNSLRTIPVRLFWDCR 181
Query: 163 WLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSG 222
L L+L+ N L L A L+ L L L + L ++ F+ + L TL+L
Sbjct: 182 SLEFLDLSTNRLRSL--ARNGFAGLIKLRELHLEHNQLT-KINFAHFLRLSSLHTLFLQW 238
Query: 223 NPLSAADLSVALK-PLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTAL 281
N +S +L+ ++ L +L L + + F L+ L + +N L + +
Sbjct: 239 NKIS--NLTCGMEWTWGTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNNKLNSLDSKI 296
Query: 282 LSPLESLEHLDMGYSNLQRIS 302
L+ L SL + + NL S
Sbjct: 297 LNSLRSLTTVGLS-GNLWECS 316
Score = 128 (50.1 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 58/248 (23%), Positives = 105/248 (42%)
Query: 243 LSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRIS 302
LSLR+ ++ L + F F+ L L + HN + L L+ L + + + +
Sbjct: 66 LSLRHNHITELERDQFASFSQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLP 125
Query: 303 RSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHE--NYTY 360
+TF ++ +L+ L LS N+L +L LF L L L L + L + +F + + +
Sbjct: 126 NTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEF 185
Query: 361 PDLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWK-NF-DFLVI-----LFI----LNETV 409
DL RL + K + Q+ K NF FL + LF+ ++
Sbjct: 186 LDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNKISNLT 245
Query: 410 FHENYTYPDLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNI 469
+T+ LE+L L+GN + + K++ L + N+ R++
Sbjct: 246 CGMEWTWGTLEKLDLTGNEIKAIDL--TVFETMPNLKILLMDNNKLNSLDSKILNSLRSL 303
Query: 470 TSLNLANN 477
T++ L+ N
Sbjct: 304 TTVGLSGN 311
Score = 122 (48.0 bits), Expect = 9.0e-06, Sum P(2) = 9.0e-06
Identities = 50/164 (30%), Positives = 76/164 (46%)
Query: 19 LITINLNANPIQPVEGA-FLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLR 77
L ++L+ N + + F R L L+++ +L I + F + +L LDLS N LR
Sbjct: 135 LQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEFLDLSTNRLR 194
Query: 78 IIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKS---HIDWTLVL 134
+ F L L L L LT I+ + F L+ L TL L NK+ + ++WT
Sbjct: 195 SLARNGFAGLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNKISNLTCGMEWTW-- 252
Query: 135 GNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLD 178
G L+ LDL + I + VF L+ L + N+L LD
Sbjct: 253 ---GTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNNKLNSLD 293
Score = 62 (26.9 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 10/30 (33%), Positives = 17/30 (56%)
Query: 513 VLRHNRAITSIKLVGNPWKCDCNIADMWEW 542
+L R++T++ L GN W+C I + W
Sbjct: 296 ILNSLRSLTTVGLSGNLWECSARICALASW 325
>UNIPROTKB|E1BP10 [details] [associations]
symbol:SLIT1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050919 "negative chemotaxis" evidence=IEA] [GO:0048846
"axon extension involved in axon guidance" evidence=IEA]
[GO:0048495 "Roundabout binding" evidence=IEA] [GO:0040023
"establishment of nucleus localization" evidence=IEA] [GO:0033563
"dorsal/ventral axon guidance" evidence=IEA] [GO:0031290 "retinal
ganglion cell axon guidance" evidence=IEA] [GO:0022028 "tangential
migration from the subventricular zone to the olfactory bulb"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 GO:GO:0005737 GO:GO:0005615 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0008045
PROSITE:PS01186 InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274
SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 InterPro:IPR025875
Pfam:PF12799 GO:GO:0031290 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
Pfam:PF12661 GO:GO:0033563 Pfam:PF01463
GeneTree:ENSGT00700000104083 GO:GO:0022028 GO:GO:0050919
OMA:KCVHGKC EMBL:DAAA02058910 IPI:IPI00697614
Ensembl:ENSBTAT00000061296 Uniprot:E1BP10
Length = 1396
Score = 201 (75.8 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 84/340 (24%), Positives = 146/340 (42%)
Query: 17 PGLIT-INLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGN 74
P +T I L N I+ + GAF R L + + +S+I P F L +LN L L GN
Sbjct: 170 PEAMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQISEIAPDAFQGLRSLNSLVLYGN 229
Query: 75 PLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVL 134
+ + GVF L +L+ L+LN + I AF +L +L L L NK++S T
Sbjct: 230 KITDLPQGVFGGLFTLQLLLLNANKINCIRLDAFQDLQNLSLLSLYDNKIQSLAKGTFT- 288
Query: 135 GNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLD 194
+L + TL L Q+ P N WL + L N + + L +
Sbjct: 289 -SLRAIQTLHLAQN-----PFICDCNLKWLADF-LRSNPIETSGARCASPRRLANKRIGQ 341
Query: 195 LSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLP 254
+ + + E F+ + L N +D+ K + + + L+++P
Sbjct: 342 IKSKKFRCSAKEQYFIPGAEDYQLNSECN----SDVVCPHKCRCEASMVECSSLKLTKIP 397
Query: 255 ANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKT 314
+ T L+ + +++A T + L L+ +++ + + I F S+
Sbjct: 398 ERV-PQATAELRLNNNEISILEA-TGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSE 455
Query: 315 LILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVF 354
L L+ N+LE++ SG+F+ L L L L N ++ ++ F
Sbjct: 456 LHLTANQLESIRSGMFRGLEGLRTLMLRNNRISCIHNDSF 495
Score = 171 (65.3 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 82/311 (26%), Positives = 126/311 (40%)
Query: 47 MQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPS 106
+ E T+ I + F T L L L N + IE G F L LE L LN N+T I S
Sbjct: 2 LSENTIQAIPRKAFRGATDLKNLQLDKNQIGCIEEGAFRALRGLEVLTLNNNNITTIPVS 61
Query: 107 AFDNLNHLKTLELSQNKL--KSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWL 164
+F+++ L+T L N L H+ W L + LRQ L + L
Sbjct: 62 SFNHMPKLRTFRLHSNHLFCDCHLAW------LSQW----LRQRPTIGLFTQC-SGPAGL 110
Query: 165 RNLNLAENELIDLDVA----------TTLGQN---LVHLDSLDLSNCHLKGPLSEDAFVN 211
R LN+AE + + + TL + S + +C KG + A N
Sbjct: 111 RGLNVAEVQKSEFSCSGQGEAGRTPSCTLSSGSCPAMCACSNGIVDCRGKGLTAIPA--N 168
Query: 212 ATKLRT-LYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDIS 270
+ T + L N + + A P KL R+ L N +S + + F L L +
Sbjct: 169 LPEAMTEIRLELNGIKSIPPG-AFSPYRKLRRIDLSNNQISEIAPDAFQGLRSLNSLVLY 227
Query: 271 HNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLF 330
N + D + L +L+ L + + + I F + +L L L NK+++L G F
Sbjct: 228 GNKITDLPQGVFGGLFTLQLLLLNANKINCIRLDAFQDLQNLSLLSLYDNKIQSLAKGTF 287
Query: 331 QNLTHLSVLEL 341
+L + L L
Sbjct: 288 TSLRAIQTLHL 298
Score = 171 (65.3 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 77/332 (23%), Positives = 134/332 (40%)
Query: 22 INLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIE 80
I+L+ N I + AF RSL L + ++ + F L TL L L+ N + I
Sbjct: 200 IDLSNNQISEIAPDAFQGLRSLNSLVLYGNKITDLPQGVFGGLFTLQLLLLNANKINCIR 259
Query: 81 PGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKL--KSHIDWTLVLGNLG 138
F L +L L L + ++ F +L ++TL L+QN ++ W
Sbjct: 260 LDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRSN 319
Query: 139 KLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNL-VHLDSLDLSN 197
++T R + L N + + E + A N + D +
Sbjct: 320 PIETSGARCASPRRLA-NKRIGQIKSKKFRCSAKEQYFIPGAEDYQLNSECNSDVVCPHK 378
Query: 198 CHLKGPLSEDAFVNATKL--RT------LYLSGNPLSAADLSVALKPLTKLHRLSLRNCG 249
C + + E + + TK+ R L L+ N +S + + K LT L +++L N
Sbjct: 379 CRCEASMVECSSLKLTKIPERVPQATAELRLNNNEISILEATGMFKKLTHLKKINLSNNK 438
Query: 250 LSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKM 309
+S + F + EL ++ N L + + LE L L + + + I +F +
Sbjct: 439 VSEIEDGAFEGAASVSELHLTANQLESIRSGMFRGLEGLRTLMLRNNRISCIHNDSFTGL 498
Query: 310 TSLKTLILSGNKLETLESGLFQNLTHLSVLEL 341
+++ L L N++ T+ G F L LS L L
Sbjct: 499 RNVRLLSLYDNQIATISPGAFDTLQALSTLNL 530
Score = 156 (60.0 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 86/314 (27%), Positives = 124/314 (39%)
Query: 22 INLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIE 80
INL+ N + +E GAF A S+ L++ L I F L L L L N + I
Sbjct: 432 INLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMFRGLEGLRTLMLRNNRISCIH 491
Query: 81 PGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHI------DWT--- 131
F L ++ L L + ISP AFD L L TL L N + DW
Sbjct: 492 NDSFTGLRNVRLLSLYDNQIATISPGAFDTLQALSTLNLLANPFNCNCQLAWLGDWLRKR 551
Query: 132 -LVLGNLGKLDTLD-LRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVH 189
+V GN + D LRQ +P A+ + E + Q
Sbjct: 552 KIVTGN-PRCQNPDFLRQ-----IPLQDVASPDFRCEEGQEEGGCLPRPQCP---QECAC 602
Query: 190 LDSL-DLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNC 248
LD++ SN HL+ L + N T+L YL GN + + L L + L N
Sbjct: 603 LDTVVRCSNKHLQ-TLPKGIPKNVTEL---YLDGNQFTL--VPAQLSTFKYLQLVDLSNN 656
Query: 249 GLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLK 308
+S L ++F + L L +S+N L L SL L + +++ + F
Sbjct: 657 KISSLSNSSFTNMSQLTTLILSYNSLQCIPPLAFQGLRSLRLLSLHGNDISTLQEGIFAD 716
Query: 309 MTSLKTLILSGNKL 322
+TSL L + N L
Sbjct: 717 VTSLSHLAIGANPL 730
Score = 122 (48.0 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 31/95 (32%), Positives = 50/95 (52%)
Query: 280 ALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVL 339
A LS + L+ +D+ + + +S S+F M+ L TLILS N L+ + FQ L L +L
Sbjct: 640 AQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNSLQCIPPLAFQGLRSLRLL 699
Query: 340 ELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLH 374
L+ ++ L E +F + L L + NPL+
Sbjct: 700 SLHGNDISTLQEGIFAD---VTSLSHLAIGANPLY 731
Score = 114 (45.2 bits), Expect = 9.1e-08, Sum P(2) = 9.1e-08
Identities = 29/89 (32%), Positives = 48/89 (53%)
Query: 253 LPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSL 312
+PA F LQ +D+S+N + + + + L L + Y++LQ I F + SL
Sbjct: 638 VPAQ-LSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNSLQCIPPLAFQGLRSL 696
Query: 313 KTLILSGNKLETLESGLFQNLTHLSVLEL 341
+ L L GN + TL+ G+F ++T LS L +
Sbjct: 697 RLLSLHGNDISTLQEGIFADVTSLSHLAI 725
Score = 108 (43.1 bits), Expect = 0.00092, Sum P(2) = 0.00092
Identities = 29/82 (35%), Positives = 40/82 (48%)
Query: 292 DMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNE 351
D+ + +Q I R F T LK L L N++ +E G F+ L L VL LNN +T +
Sbjct: 1 DLSENTIQAIPRKAFRGATDLKNLQLDKNQIGCIEEGAFRALRGLEVLTLNNNNITTIPV 60
Query: 352 TVFHENYTYPDLEELRLSGNPL 373
+ F+ P L RL N L
Sbjct: 61 SSFNH---MPKLRTFRLHSNHL 79
Score = 100 (40.3 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 39/145 (26%), Positives = 63/145 (43%)
Query: 22 INLNANPIQPVE--GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRII 79
+ LN N I +E G F L + + +S+I F ++++L L+ N L I
Sbjct: 407 LRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESI 466
Query: 80 EPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGK 139
G+F L L LML ++ I +F L +++ L L N++ + L
Sbjct: 467 RSGMFRGLEGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIATISPGAF--DTLQA 524
Query: 140 LDTLDLRQSGISNLPDNVFANNTWL 164
L TL+L ++N P N WL
Sbjct: 525 LSTLNL----LAN-PFNCNCQLAWL 544
Score = 67 (28.6 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 25/125 (20%), Positives = 46/125 (36%)
Query: 418 DLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANN 477
++ EL L GN ++P KI L + F N +T+L L+ N
Sbjct: 624 NVTELYLDGNQFTLVPA---QLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYN 680
Query: 478 NLSMTSELSFQFXXXXXXXXXXXXXXXXXTHISPTVLRHNRAITSIKLVGNPWKCDCNIA 537
+L L+FQ + + + +++ + + NP CDC++
Sbjct: 681 SLQCIPPLAFQ---GLRSLRLLSLHGNDISTLQEGIFADVTSLSHLAIGANPLYCDCHLR 737
Query: 538 DMWEW 542
+ W
Sbjct: 738 WLSSW 742
>UNIPROTKB|F1MUR6 [details] [associations]
symbol:RTN4RL2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046658 "anchored to plasma membrane" evidence=IEA]
[GO:0009986 "cell surface" evidence=IEA] [GO:0004872 "receptor
activity" evidence=IEA] GO:GO:0009986 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0004872
InterPro:IPR000372 SMART:SM00013 GO:GO:0046658
GeneTree:ENSGT00690000101803 OMA:WFREARV EMBL:DAAA02041755
EMBL:DAAA02041756 IPI:IPI00691427 Ensembl:ENSBTAT00000016755
Uniprot:F1MUR6
Length = 417
Score = 169 (64.5 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 65/206 (31%), Positives = 94/206 (45%)
Query: 68 KLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSH 127
+L L N + + PG F P SL L L NL+ I P F +L L+ L+L N+
Sbjct: 61 RLFLQNNLIGALRPGSFGP--SLLTLWLFSNNLSAIYPGTFRHLQALEELDLGDNRHLRS 118
Query: 128 IDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNL 187
++ G L +L +L L + +S+LP +F L+ L L EN L+ L L +L
Sbjct: 119 LEPDTFQG-LERLQSLHLYRCQLSSLPGTIFRGLVSLQYLYLQENSLVHLQ--DDLFADL 175
Query: 188 VHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRN 247
+L L L L+ L+E F L L L GN L + A + L +L L L N
Sbjct: 176 ANLSHLFLHGNRLR-LLTEHVFRGLGSLDRLLLHGNRLQGVHRA-AFRGLGRLTILYLFN 233
Query: 248 CGLSRLPANTFHRFTCLQELDISHNP 273
L+ LP L+ L ++ NP
Sbjct: 234 NSLASLPGEALADLPSLEFLRLNANP 259
Score = 163 (62.4 bits), Expect = 5.9e-13, Sum P(2) = 5.9e-13
Identities = 45/136 (33%), Positives = 65/136 (47%)
Query: 237 LTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYS 296
L +L L L C LS LP F LQ L + N L+ L + L +L HL + +
Sbjct: 127 LERLQSLHLYRCQLSSLPGTIFRGLVSLQYLYLQENSLVHLQDDLFADLANLSHLFLHGN 186
Query: 297 NLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHE 356
L+ ++ F + SL L+L GN+L+ + F+ L L++L L N L L +
Sbjct: 187 RLRLLTEHVFRGLGSLDRLLLHGNRLQGVHRAAFRGLGRLTILYLFNNSLASLPGEALAD 246
Query: 357 NYTYPDLEELRLSGNP 372
P LE LRL+ NP
Sbjct: 247 ---LPSLEFLRLNANP 259
Score = 159 (61.0 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 70/210 (33%), Positives = 94/210 (44%)
Query: 17 PGLITINLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNP 75
PG + L N I + G+F SLL L++ LS I P F +L L +LDL N
Sbjct: 57 PGTQRLFLQNNLIGALRPGSF--GPSLLTLWLFSNNLSAIYPGTFRHLQALEELDLGDNR 114
Query: 76 -LRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVL 134
LR +EP F L L+ L L RC L+ + + F L L+ L L +N L H+ L
Sbjct: 115 HLRSLEPDTFQGLERLQSLHLYRCQLSSLPGTIFRGLVSLQYLYLQENSLV-HLQDDL-F 172
Query: 135 GNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLD 194
+L L L L + + L ++VF L L L N L + A G L L L
Sbjct: 173 ADLANLSHLFLHGNRLRLLTEHVFRGLGSLDRLLLHGNRLQGVHRAAFRG--LGRLTILY 230
Query: 195 LSNCHLKGPLSEDAFVNATKLRTLYLSGNP 224
L N L L +A + L L L+ NP
Sbjct: 231 LFNNSLAS-LPGEALADLPSLEFLRLNANP 259
Score = 107 (42.7 bits), Expect = 9.0e-07, Sum P(2) = 9.0e-07
Identities = 48/163 (29%), Positives = 69/163 (42%)
Query: 193 LDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLR-NCGLS 251
L L N +L G L +F L TL+L N LSA + L L L L N L
Sbjct: 62 LFLQN-NLIGALRPGSF--GPSLLTLWLFSNNLSAI-YPGTFRHLQALEELDLGDNRHLR 117
Query: 252 RLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTS 311
L +TF LQ L + L + L SL++L + ++L + F + +
Sbjct: 118 SLEPDTFQGLERLQSLHLYRCQLSSLPGTIFRGLVSLQYLYLQENSLVHLQDDLFADLAN 177
Query: 312 LKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVF 354
L L L GN+L L +F+ L L L L+ L ++ F
Sbjct: 178 LSHLFLHGNRLRLLTEHVFRGLGSLDRLLLHGNRLQGVHRAAF 220
Score = 85 (35.0 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 30/107 (28%), Positives = 44/107 (41%)
Query: 523 IKLVGNPWKCDCNIADMWEWATREKGDIGVLVGSTTPTEIG--FGASRKKKGLVCYFDIF 580
++L NPW CDC +W W R + + ++ P G A R+ C
Sbjct: 253 LRLNANPWACDCRARPLWAWFQRARVSSSDVTCASPPERRGRDLRALREADFQACPP--- 309
Query: 581 TTPTRKRPGRELFASTNKTWARYVKEADCPS---SKLFRP-PRTNSR 623
PTR PG A+++ V EA P S L+R P ++R
Sbjct: 310 AAPTR--PGGRARANSSSNHLYGVAEAGAPPADPSTLYRDLPAEDAR 354
>RGD|1308812 [details] [associations]
symbol:Mfhas1 "malignant fibrous histiocytoma amplified sequence
1" species:10116 "Rattus norvegicus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 RGD:1308812
InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875 Pfam:PF12799
EMBL:CH473970 InterPro:IPR020859 PROSITE:PS51424
GeneTree:ENSGT00690000102098 CTD:9258 OrthoDB:EOG4CVG64
IPI:IPI00212019 RefSeq:NP_001100786.1 UniGene:Rn.106316
Ensembl:ENSRNOT00000015203 GeneID:306508 KEGG:rno:306508
UCSC:RGD:1308812 NextBio:656142 Uniprot:D3ZJL1
Length = 1046
Score = 214 (80.4 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 103/318 (32%), Positives = 149/318 (46%)
Query: 132 LVL-GNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATT-LGQNLVH 189
LVL N+G ++ L+L +G+ ++P+ + + LR L L N L A LG H
Sbjct: 52 LVLPANIGDIEVLNLGNNGLEDVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGH---H 108
Query: 190 LDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCG 249
L LD+S+ L L + +LR L LS N L A L L L L L +
Sbjct: 109 LTELDVSHNRLT-ILGAEVVSALRELRKLNLSHNQLPA--LPAQLGALAHLEELDVSFNR 165
Query: 250 LSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKM 309
L+ LP ++F L+ LD+ HN L AF L L +LE LD+ + L+ + +
Sbjct: 166 LAHLP-DSFSCLNHLRTLDVDHNQLT-AFPQQLLQLAALEELDVSSNRLRGLPED-ISAL 222
Query: 310 TSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLS 369
+LK L LSG +L TL SG F L L L L+N GL L + E L+ L LS
Sbjct: 223 RALKILWLSGAELGTLPSG-FCELASLESLMLDNNGLQALPD----EFSRLQRLKMLNLS 277
Query: 370 GN-----PLHVLPDSTKQ--YSMR----TIPTQIWKNFDFLVILFILNETVFHENYTYPD 418
N P +LP + + Y R ++P+ I L+ L++ N + + + +
Sbjct: 278 SNLFEEFPAALLPLAGLEELYLSRNQLTSVPSLI-AGLGRLLTLWLDNNRIRYLPDSIVE 336
Query: 419 L---EELRLSGNPLHVLP 433
L EEL L GN + VLP
Sbjct: 337 LTGLEELVLQGNQIAVLP 354
Score = 174 (66.3 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 89/299 (29%), Positives = 136/299 (45%)
Query: 62 NLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQ 121
N+ + L+L N L + G+ L SL L+L R + P+ + +HL L++S
Sbjct: 57 NIGDIEVLNLGNNGLEDVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSH 116
Query: 122 NKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFA-------NNTWLRNLNLAE--- 171
N+L I V+ L +L L+L + + LP + A + ++ R +L +
Sbjct: 117 NRLT--ILGAEVVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSFS 174
Query: 172 --NELIDLDV----ATTLGQNLVHLDSLD-LS-NCHLKGPLSEDAFVNATK-LRTLYLSG 222
N L LDV T Q L+ L +L+ L + + L ED ++A + L+ L+LSG
Sbjct: 175 CLNHLRTLDVDHNQLTAFPQQLLQLAALEELDVSSNRLRGLPED--ISALRALKILWLSG 232
Query: 223 NPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALL 282
L L L L L L N GL LP + F R L+ L++S N L + F A L
Sbjct: 233 AELGT--LPSGFCELASLESLMLDNNGLQALP-DEFSRLQRLKMLNLSSN-LFEEFPAAL 288
Query: 283 SPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLEL 341
PL LE L + + L + S + L TL L N++ L + + LT L L L
Sbjct: 289 LPLAGLEELYLSRNQLTSVP-SLIAGLGRLLTLWLDNNRIRYLPDSIVE-LTGLEELVL 345
Score = 164 (62.8 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 82/325 (25%), Positives = 143/325 (44%)
Query: 22 INLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIE 80
+NL N ++ V EG SL L ++ +++ P L +LD+S N L I+
Sbjct: 64 LNLGNNGLEDVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRLTILG 123
Query: 81 PGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKL 140
V L L L L+ L + P+ L HL+ L++S N+L +H+ + L L
Sbjct: 124 AEVVSALRELRKLNLSHNQLPAL-PAQLGALAHLEELDVSFNRL-AHLPDSFSC--LNHL 179
Query: 141 DTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDL--DVATTLGQNLVHLDSLDLSNC 198
TLD+ + ++ P + L L+++ N L L D++ ++ L +L
Sbjct: 180 RTLDVDHNQLTAFPQQLLQLAA-LEELDVSSNRLRGLPEDISALRALKILWLSGAEL--- 235
Query: 199 HLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTF 258
G L F L +L L N L A L L +L L+L + PA
Sbjct: 236 ---GTLPS-GFCELASLESLMLDNNGLQA--LPDEFSRLQRLKMLNLSSNLFEEFPAALL 289
Query: 259 HRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILS 318
L+EL +S N L +L++ L L L + + ++ + S +++T L+ L+L
Sbjct: 290 P-LAGLEELYLSRNQLTSV-PSLIAGLGRLLTLWLDNNRIRYLPDS-IVELTGLEELVLQ 346
Query: 319 GNKLETLESGLFQNLTHLSVLELNN 343
GN++ L F L+ + + ++ +
Sbjct: 347 GNQIAVLPDN-FGQLSRVGLWKIKD 370
Score = 156 (60.0 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 92/316 (29%), Positives = 134/316 (42%)
Query: 90 LEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSG 149
+E L L L + L L+ L L +N+ LG+ L LD+ +
Sbjct: 61 IEVLNLGNNGLEDVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGH--HLTELDVSHNR 118
Query: 150 ISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAF 209
++ L V + LR LNL+ N+L L LG L HL+ LD+S L D+F
Sbjct: 119 LTILGAEVVSALRELRKLNLSHNQLPALPAQ--LGA-LAHLEELDVSFNRLAH--LPDSF 173
Query: 210 VNATKLRTLYLSGNPLSA-----------ADLSVA----------LKPLTKLHRLSLRNC 248
LRTL + N L+A +L V+ + L L L L
Sbjct: 174 SCLNHLRTLDVDHNQLTAFPQQLLQLAALEELDVSSNRLRGLPEDISALRALKILWLSGA 233
Query: 249 GLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLK 308
L LP+ F L+ L + +N L A S L+ L+ L++ SNL + L
Sbjct: 234 ELGTLPSG-FCELASLESLMLDNNGL-QALPDEFSRLQRLKMLNLS-SNLFEEFPAALLP 290
Query: 309 MTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRL 368
+ L+ L LS N+L ++ S L L L L L+N + L +++ LEEL L
Sbjct: 291 LAGLEELYLSRNQLTSVPS-LIAGLGRLLTLWLDNNRIRYLPDSIVE----LTGLEELVL 345
Query: 369 SGNPLHVLPDSTKQYS 384
GN + VLPD+ Q S
Sbjct: 346 QGNQIAVLPDNFGQLS 361
Score = 39 (18.8 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 10/34 (29%), Positives = 16/34 (47%)
Query: 359 TYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQI 392
+Y ++ LS L+VL + Y R PT +
Sbjct: 479 SYEVIQPFFLSPGALYVLVVNLATYEPRCFPTTV 512
>UNIPROTKB|O15455 [details] [associations]
symbol:TLR3 "Toll-like receptor 3" species:9606 "Homo
sapiens" [GO:0006954 "inflammatory response" evidence=IEA]
[GO:0034346 "positive regulation of type III interferon production"
evidence=IEA] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0045080 "positive regulation of
chemokine biosynthetic process" evidence=IEA] [GO:0046330 "positive
regulation of JNK cascade" evidence=IEA] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=IEA] [GO:0007250 "activation of NF-kappaB-inducing kinase
activity" evidence=NAS] [GO:0016020 "membrane" evidence=NAS]
[GO:0004888 "transmembrane signaling receptor activity"
evidence=NAS] [GO:0006972 "hyperosmotic response" evidence=NAS]
[GO:0003725 "double-stranded RNA binding" evidence=IDA;NAS]
[GO:0045671 "negative regulation of osteoclast differentiation"
evidence=NAS] [GO:0045078 "positive regulation of interferon-gamma
biosynthetic process" evidence=IDA] [GO:0045356 "positive
regulation of interferon-alpha biosynthetic process" evidence=IDA]
[GO:0045359 "positive regulation of interferon-beta biosynthetic
process" evidence=IMP;IDA] [GO:0009597 "detection of virus"
evidence=NAS] [GO:0071260 "cellular response to mechanical
stimulus" evidence=IEP] [GO:0042742 "defense response to bacterium"
evidence=TAS] [GO:0004872 "receptor activity" evidence=TAS]
[GO:0005887 "integral to plasma membrane" evidence=TAS] [GO:0007165
"signal transduction" evidence=TAS] [GO:0000139 "Golgi membrane"
evidence=TAS] [GO:0002756 "MyD88-independent toll-like receptor
signaling pathway" evidence=TAS] [GO:0005789 "endoplasmic reticulum
membrane" evidence=TAS] [GO:0007249 "I-kappaB kinase/NF-kappaB
cascade" evidence=TAS] [GO:0008063 "Toll signaling pathway"
evidence=TAS] [GO:0010008 "endosome membrane" evidence=TAS]
[GO:0034138 "toll-like receptor 3 signaling pathway" evidence=TAS]
[GO:0034142 "toll-like receptor 4 signaling pathway" evidence=TAS]
[GO:0035666 "TRIF-dependent toll-like receptor signaling pathway"
evidence=TAS] [GO:0036020 "endolysosome membrane" evidence=TAS]
[GO:0045087 "innate immune response" evidence=TAS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0032735 "positive regulation of
interleukin-12 production" evidence=ISS] [GO:0032760 "positive
regulation of tumor necrosis factor production" evidence=ISS]
[GO:0051607 "defense response to virus" evidence=TAS] [GO:0032728
"positive regulation of interferon-beta production" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0042346 "positive
regulation of NF-kappaB import into nucleus" evidence=IDA]
[GO:0007252 "I-kappaB phosphorylation" evidence=IDA] [GO:0032722
"positive regulation of chemokine production" evidence=IDA]
[GO:0009986 "cell surface" evidence=IDA] [GO:0032755 "positive
regulation of interleukin-6 production" evidence=IDA] [GO:0034123
"positive regulation of toll-like receptor signaling pathway"
evidence=IDA] [GO:0032757 "positive regulation of interleukin-8
production" evidence=IDA] [GO:0050729 "positive regulation of
inflammatory response" evidence=IC] InterPro:IPR000157
InterPro:IPR001611 InterPro:IPR027173 Pfam:PF01582 PROSITE:PS50104
PROSITE:PS51450 SMART:SM00255 Reactome:REACT_6900 GO:GO:0000139
GO:GO:0005887 GO:GO:0005789 GO:GO:0043123 GO:GO:0042742
GO:GO:0006954 GO:GO:0046330 GO:GO:0045944 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0045087 GO:GO:0032722 GO:GO:0032755 GO:GO:0050729
GO:GO:0051607 GO:GO:0006972 GO:GO:0008584 GO:GO:0043065
GO:GO:0035690 EMBL:CH471056 GO:GO:0003725 GO:GO:0051092
GO:GO:0032757 GO:GO:0071260 GO:GO:0071346 GO:GO:0035458
InterPro:IPR000372 SMART:SM00013 GO:GO:0007250 GO:GO:0004888
GO:GO:0032760 GO:GO:0008063 GO:GO:0034138 GO:GO:0034142
GO:GO:0035666 GO:GO:0052033 GO:GO:0045671 GO:GO:0032735
GO:GO:0042346 GO:GO:0045078 GO:GO:0002282 GO:GO:0032728
GO:GO:0009597 GO:GO:0007252 GO:GO:0045080 SUPFAM:SSF52200
GO:GO:0071360 GO:GO:0045359 Orphanet:1930 GO:GO:0034123 CTD:7098
HOVERGEN:HBG023181 KO:K05401 OrthoDB:EOG4N30N8
PANTHER:PTHR24365:SF5 EMBL:U88879 EMBL:DQ445682 EMBL:AB445631
EMBL:BC096333 EMBL:BC096334 EMBL:BC096335 IPI:IPI00019007
RefSeq:NP_003256.1 UniGene:Hs.657724 PDB:1ZIW PDB:2A0Z PDB:3ULU
PDB:3ULV PDBsum:1ZIW PDBsum:2A0Z PDBsum:3ULU PDBsum:3ULV
ProteinModelPortal:O15455 SMR:O15455 DIP:DIP-29660N IntAct:O15455
MINT:MINT-2840066 STRING:O15455 PhosphoSite:O15455 PaxDb:O15455
PRIDE:O15455 Ensembl:ENST00000296795 GeneID:7098 KEGG:hsa:7098
UCSC:uc003iyq.3 GeneCards:GC04P186990 HGNC:HGNC:11849 HPA:CAB025658
MIM:603029 MIM:613002 neXtProt:NX_O15455 PharmGKB:PA36551
HOGENOM:HOG000251618 InParanoid:O15455 OMA:IANINDD PhylomeDB:O15455
ChEMBL:CHEMBL1075113 EvolutionaryTrace:O15455 GenomeRNAi:7098
NextBio:27769 ArrayExpress:O15455 Bgee:O15455 CleanEx:HS_TLR3
Genevestigator:O15455 GermOnline:ENSG00000164342 GO:GO:0036020
GO:GO:0045356 GO:GO:0034346 Uniprot:O15455
Length = 904
Score = 213 (80.0 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 126/487 (25%), Positives = 212/487 (43%)
Query: 15 DNPGLITI-NLNANPIQPVEGA-FLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLS 72
D P IT+ NL N ++ + A F L L + T+SK+ P+ L L L+L
Sbjct: 48 DLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQ 107
Query: 73 GNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTL 132
N L + F T+L L L ++ I + F +L TL+LS N L S T
Sbjct: 108 HNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQ 167
Query: 133 V-LGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLD 191
V L NL +L + + + + ++FAN++ L+ L L+ N++ + + L
Sbjct: 168 VQLENLQELLLSNNKIQALKSEELDIFANSS-LKKLELSSNQIKEFSPGCF--HAIGRLF 224
Query: 192 SLDLSNCHLKGPLSEDAFVNA--TKLRTLYLSGNPLSAADLSVALK-PLTKLHRLSLRNC 248
L L+N L L+E + T +R L LS + LS + L T L L L
Sbjct: 225 GLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYN 284
Query: 249 GLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYS---------NLQ 299
L+ + ++F L+ + +N + F+ L L ++ +L++ S +L
Sbjct: 285 NLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLP 344
Query: 300 RISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYT 359
+I +F + L+ L + N + ++S +F L +L L L+N T L T+ +E +
Sbjct: 345 KIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSN-SFTSLR-TLTNETF- 401
Query: 360 YPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFI-LNETVFHE--NYTY 416
+ L+ +PLH+L + TK + I + + L +L + LNE + E +
Sbjct: 402 ------VSLAHSPLHIL-NLTKN-KISKIESDAFSWLGHLEVLDLGLNE-IGQELTGQEW 452
Query: 417 PDLE---ELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLN 473
LE E+ LS N L + K P+ F RN+T L+
Sbjct: 453 RGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILD 512
Query: 474 LANNNLS 480
L+NNN++
Sbjct: 513 LSNNNIA 519
Score = 173 (66.0 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 103/384 (26%), Positives = 169/384 (44%)
Query: 51 TLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRC--NLTYISPSAF 108
+L KI+ F L L L++ N + I+ +F L +L+YL L+ +L ++ F
Sbjct: 342 SLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETF 401
Query: 109 DNLNH--LKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTW--L 164
+L H L L L++NK+ S I+ + LG L+ LDL G++ + + W L
Sbjct: 402 VSLAHSPLHILNLTKNKI-SKIE-SDAFSWLGHLEVLDL---GLNEIGQEL-TGQEWRGL 455
Query: 165 RNL---NLAENELIDLDVATTLGQNLV-HLDSLDLSNCHLKG-PLSEDAFVNATKLRTLY 219
N+ L+ N+ + L T LV L L L LK S F L L
Sbjct: 456 ENIFEIYLSYNKYLQL---TRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILD 512
Query: 220 LSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRL-----PANTFHRFTCLQELDISH--- 271
LS N ++ + + L+ L KL L L++ L+RL P + L L I +
Sbjct: 513 LSNNNIANINDDM-LEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLES 571
Query: 272 NPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLF- 330
N + + L L+ +D+G +NL + S F SLK+L L N + ++E +F
Sbjct: 572 NGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFG 631
Query: 331 ---QNLTHLSVLELN--NCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQYSM 385
+NLT L + N +C + V N T+ ++ EL S + L P + +
Sbjct: 632 PAFRNLTELD-MRFNPFDCTCESIAWFVNWINETHTNIPEL--SSHYLCNTPPHYHGFPV 688
Query: 386 RTIPTQIWKNFDFLVILFILNETV 409
R T K+ + F++N ++
Sbjct: 689 RLFDTSSCKDSAPFELFFMINTSI 712
>TAIR|locus:2011339 [details] [associations]
symbol:AT1G35710 species:3702 "Arabidopsis thaliana"
[GO:0004672 "protein kinase activity" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=ISS]
[GO:0004713 "protein tyrosine kinase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005886 "plasma
membrane" evidence=ISM] [GO:0006468 "protein phosphorylation"
evidence=IEA;ISS] [GO:0007169 "transmembrane receptor protein
tyrosine kinase signaling pathway" evidence=ISS] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0000165 "MAPK cascade" evidence=RCA] [GO:0009814
"defense response, incompatible interaction" evidence=RCA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000719
InterPro:IPR008266 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00109 PROSITE:PS50011
PROSITE:PS51450 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 eggNOG:COG0515
SUPFAM:SSF56112 GO:GO:0004674 InterPro:IPR003591 SMART:SM00369
Gene3D:2.60.120.200 InterPro:IPR013320 GO:GO:0004713 EMBL:AC021198
HOGENOM:HOG000116551 InterPro:IPR013210 Pfam:PF08263 HSSP:P25146
EMBL:AK319165 EMBL:FJ708647 EMBL:AY042808 IPI:IPI00538994
IPI:IPI00954379 IPI:IPI00954382 PIR:B86479 RefSeq:NP_174809.1
UniGene:At.15433 UniGene:At.74997 ProteinModelPortal:Q9LP24
SMR:Q9LP24 STRING:Q9LP24 PaxDb:Q9LP24 PRIDE:Q9LP24
EnsemblPlants:AT1G35710.1 GeneID:840475 KEGG:ath:AT1G35710
GeneFarm:669 TAIR:At1g35710 InParanoid:Q9LP24 OMA:GNMESMT
PhylomeDB:Q9LP24 ProtClustDB:CLSN2914378 Uniprot:Q9LP24
Length = 1120
Score = 214 (80.4 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 105/349 (30%), Positives = 164/349 (46%)
Query: 36 FLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLR-IIEPGVFDPLTSLEYLM 94
F+ +L Y+ + LS P F NL+ L DLS N L I P + + L +L L
Sbjct: 98 FISLSNLAYVDLSMNLLSGTIPPQFGNLSKLIYFDLSTNHLTGEISPSLGN-LKNLTVLY 156
Query: 95 LNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLP 154
L++ LT + PS N+ + L LSQNKL I +L GNL L L L ++ ++ +
Sbjct: 157 LHQNYLTSVIPSELGNMESMTDLALSQNKLTGSIPSSL--GNLKNLMVLYLYENYLTGVI 214
Query: 155 DNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATK 214
N + +L L++N+L + +TLG NL +L L L +L G + + N
Sbjct: 215 PPELGNMESMTDLALSQNKLTG-SIPSTLG-NLKNLMVLYLYENYLTGVIPPE-IGNMES 271
Query: 215 LRTLYLSGNPLSAADLSVALKPLTKLHRLSL-RNCGLSRLPANTFHRFTCLQELDISHNP 273
+ L LS N L+ + + +L L L LSL +N +P + +L++S+N
Sbjct: 272 MTNLALSQNKLTGS-IPSSLGNLKNLTLLSLFQNYLTGGIPPK-LGNIESMIDLELSNNK 329
Query: 274 LIDAFTALLSPLESLEHLDMGYSN-LQRISRSTFLKMTSLKTLILSGNKLETLESGLFQN 332
L + + L L++L L + Y N L + M S+ L L+ NKL F N
Sbjct: 330 LTGSIPSSLGNLKNLTILYL-YENYLTGVIPPELGNMESMIDLQLNNNKLTGSIPSSFGN 388
Query: 333 LTHLSVLELNNCGLTRL--NETVFHENYTYPDLEELRLSGNPLHVLPDS 379
L +L+ L L LT + E E+ DL + +L+G+ +PDS
Sbjct: 389 LKNLTYLYLYLNYLTGVIPQELGNMESMINLDLSQNKLTGS----VPDS 433
Score = 213 (80.0 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 94/357 (26%), Positives = 164/357 (45%)
Query: 19 LITINLNANPIQ-PVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLR 77
+I + L+ N + + + ++L LY+ E L+ + P N+ ++ L L+ N L
Sbjct: 320 MIDLELSNNKLTGSIPSSLGNLKNLTILYLYENYLTGVIPPELGNMESMIDLQLNNNKLT 379
Query: 78 IIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNL 137
P F L +L YL L LT + P N+ + L+LSQNKL + + GN
Sbjct: 380 GSIPSSFGNLKNLTYLYLYLNYLTGVIPQELGNMESMINLDLSQNKLTGSVPDSF--GNF 437
Query: 138 GKLDTLDLRQSGISN-LPDNVFANNTWLRNLNLAENELIDLDVATTL-GQNLVHLDSLDL 195
KL++L LR + +S +P V AN++ L L L N T G+ L ++ SLD
Sbjct: 438 TKLESLYLRVNHLSGAIPPGV-ANSSHLTTLILDTNNFTGFFPETVCKGRKLQNI-SLDY 495
Query: 196 SNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPA 255
+ HL+GP+ + + +R +L GN + D+ A L+ + + +
Sbjct: 496 N--HLEGPIPKSLRDCKSLIRARFL-GNKFTG-DIFEAFGIYPDLNFIDFSHNKFHGEIS 551
Query: 256 NTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTL 315
+ + + L L +S+N + A + + L LD+ +NL +T+L L
Sbjct: 552 SNWEKSPKLGALIMSNNNITGAIPTEIWNMTQLVELDLSTNNLFGELPEAIGNLTNLSRL 611
Query: 316 ILSGNKLE-TLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGN 371
L+GN+L + +GL LT+L L+L++ + F ++ L ++ LS N
Sbjct: 612 RLNGNQLSGRVPAGL-SFLTNLESLDLSSNNFSSEIPQTFD---SFLKLHDMNLSRN 664
Score = 199 (75.1 bits), Expect = 6.0e-12, P = 6.0e-12
Identities = 88/324 (27%), Positives = 142/324 (43%)
Query: 19 LITINLNANPIQ-PVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLR 77
LI +L+ N + + + ++L LY+ + L+ + P N+ ++ L LS N L
Sbjct: 128 LIYFDLSTNHLTGEISPSLGNLKNLTVLYLHQNYLTSVIPSELGNMESMTDLALSQNKLT 187
Query: 78 IIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNL 137
P L +L L L LT + P N+ + L LSQNKL I TL GNL
Sbjct: 188 GSIPSSLGNLKNLMVLYLYENYLTGVIPPELGNMESMTDLALSQNKLTGSIPSTL--GNL 245
Query: 138 GKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSN 197
L L L ++ ++ + N + NL L++N+L + ++LG NL +L L L
Sbjct: 246 KNLMVLYLYENYLTGVIPPEIGNMESMTNLALSQNKLTG-SIPSSLG-NLKNLTLLSLFQ 303
Query: 198 CHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANT 257
+L G + N + L LS N L+ + + +L L L L L L+ +
Sbjct: 304 NYLTGGIPPK-LGNIESMIDLELSNNKLTGS-IPSSLGNLKNLTILYLYENYLTGVIPPE 361
Query: 258 FHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLIL 317
+ +L +++N L + + L++L +L + + L + M S+ L L
Sbjct: 362 LGNMESMIDLQLNNNKLTGSIPSSFGNLKNLTYLYLYLNYLTGVIPQELGNMESMINLDL 421
Query: 318 SGNKLETLESGLFQNLTHLSVLEL 341
S NKL F N T L L L
Sbjct: 422 SQNKLTGSVPDSFGNFTKLESLYL 445
Score = 190 (71.9 bits), Expect = 5.6e-11, P = 5.6e-11
Identities = 77/247 (31%), Positives = 120/247 (48%)
Query: 107 AFDNLNHLKTLELSQNKLKSHI--DWTLVLGNLGKLDTLDLRQSGISN-LPDNVFANNTW 163
AF L ++ S NK I +W KL L + + I+ +P ++ N T
Sbjct: 529 AFGIYPDLNFIDFSHNKFHGEISSNWE----KSPKLGALIMSNNNITGAIPTEIW-NMTQ 583
Query: 164 LRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSED-AFVNATKLRTLYLSG 222
L L+L+ N L ++ +G NL +L L L+ L G + +F+ T L +L LS
Sbjct: 584 LVELDLSTNNLFG-ELPEAIG-NLTNLSRLRLNGNQLSGRVPAGLSFL--TNLESLDLSS 639
Query: 223 NPLSAADLSVALKPLTKLHRLSL-RNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTAL 281
N S+ ++ KLH ++L RN +P + T L +LD+SHN L +
Sbjct: 640 NNFSS-EIPQTFDSFLKLHDMNLSRNKFDGSIPR--LSKLTQLTQLDLSHNQLDGEIPSQ 696
Query: 282 LSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLE-TL-ESGLFQNLTHLSVL 339
LS L+SL+ LD+ ++NL + +TF M +L + +S NKLE L ++ F+ T L
Sbjct: 697 LSSLQSLDKLDLSHNNLSGLIPTTFEGMIALTNVDISNNKLEGPLPDTPTFRKAT-ADAL 755
Query: 340 ELNNCGL 346
E N GL
Sbjct: 756 E-ENIGL 761
Score = 179 (68.1 bits), Expect = 8.7e-10, P = 8.7e-10
Identities = 101/359 (28%), Positives = 152/359 (42%)
Query: 40 RSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCN 99
++L+ LY+ E L+ + P N+ ++ L LS N L P L +L L L
Sbjct: 198 KNLMVLYLYENYLTGVIPPELGNMESMTDLALSQNKLTGSIPSTLGNLKNLMVLYLYENY 257
Query: 100 LTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISN-LPDNVF 158
LT + P N+ + L LSQNKL I +L GNL L L L Q+ ++ +P +
Sbjct: 258 LTGVIPPEIGNMESMTNLALSQNKLTGSIPSSL--GNLKNLTLLSLFQNYLTGGIPPKL- 314
Query: 159 ANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTL 218
N + +L L+ N+L + ++LG NL +L L L +L G + + N + L
Sbjct: 315 GNIESMIDLELSNNKLTG-SIPSSLG-NLKNLTILYLYENYLTGVIPPE-LGNMESMIDL 371
Query: 219 YLSGNPLSAADLSVA--LKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLID 276
L+ N L+ + S LK LT L+ L L L+ + + LD+S N L
Sbjct: 372 QLNNNKLTGSIPSSFGNLKNLTYLY-LYLNY--LTGVIPQELGNMESMINLDLSQNKLTG 428
Query: 277 AFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKL-----ETLESGL-F 330
+ LE L + ++L + L TLIL N ET+ G
Sbjct: 429 SVPDSFGNFTKLESLYLRVNHLSGAIPPGVANSSHLTTLILDTNNFTGFFPETVCKGRKL 488
Query: 331 QNLT----HLS---VLELNNC-GLTRL----NE---TVFHENYTYPDLEELRLSGNPLH 374
QN++ HL L +C L R N+ +F YPDL + S N H
Sbjct: 489 QNISLDYNHLEGPIPKSLRDCKSLIRARFLGNKFTGDIFEAFGIYPDLNFIDFSHNKFH 547
Score = 170 (64.9 bits), Expect = 8.2e-09, P = 8.2e-09
Identities = 115/458 (25%), Positives = 185/458 (40%)
Query: 41 SLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNL 100
+LL L+ T I P+ N+ ++ L+LS N L P L +L L L L
Sbjct: 297 TLLSLFQNYLT-GGIPPKL-GNIESMIDLELSNNKLTGSIPSSLGNLKNLTILYLYENYL 354
Query: 101 TYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFAN 160
T + P N+ + L+L+ NKL I + GNL L L L + ++ + N
Sbjct: 355 TGVIPPELGNMESMIDLQLNNNKLTGSIPSSF--GNLKNLTYLYLYLNYLTGVIPQELGN 412
Query: 161 NTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYL 220
+ NL+L++N+L V + G N L+SL L HL G + N++ L TL L
Sbjct: 413 MESMINLDLSQNKLTG-SVPDSFG-NFTKLESLYLRVNHLSGAIPPGV-ANSSHLTTLIL 469
Query: 221 SGNPLSAADLSVALKPLTKLHRLSLRNCGLSR-LPANTFHRFTCLQELDISHNPLIDAFT 279
N + K KL +SL L +P + + ++ + + D F
Sbjct: 470 DTNNFTGFFPETVCKG-RKLQNISLDYNHLEGPIPKSLRDCKSLIRARFLGNKFTGDIFE 528
Query: 280 AL-LSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSV 338
A + P L +D ++ S + K L LI+S N + N+T L
Sbjct: 529 AFGIYP--DLNFIDFSHNKFHGEISSNWEKSPKLGALIMSNNNITGAIPTEIWNMTQLVE 586
Query: 339 LELNNCGLT-RLNETVFHENYTYPDLEELRLSGN------P--LHVLPD-STKQYSMRTI 388
L+L+ L L E + N T +L LRL+GN P L L + + S
Sbjct: 587 LDLSTNNLFGELPEAI--GNLT--NLSRLRLNGNQLSGRVPAGLSFLTNLESLDLSSNNF 642
Query: 389 PTQIWKNFDFLVILFILNETVFHENYTYP------DLEELRLSGNPLH-VLPTGNXXXXX 441
++I + FD + L +N + + + P L +L LS N L +P+
Sbjct: 643 SSEIPQTFDSFLKLHDMNLSRNKFDGSIPRLSKLTQLTQLDLSHNQLDGEIPS---QLSS 699
Query: 442 XXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNL 479
+ L P F +T+++++NN L
Sbjct: 700 LQSLDKLDLSHNNLSGLIPTTFEGMIALTNVDISNNKL 737
Score = 161 (61.7 bits), Expect = 7.7e-08, P = 7.7e-08
Identities = 53/159 (33%), Positives = 81/159 (50%)
Query: 57 PQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKT 116
P+ NLT L++L L+GN L P LT+LE L L+ N + P FD+ L
Sbjct: 599 PEAIGNLTNLSRLRLNGNQLSGRVPAGLSFLTNLESLDLSSNNFSSEIPQTFDSFLKLHD 658
Query: 117 LELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISN-LPDNVFANNTWLRNLNLAENELI 175
+ LS+NK I L L +L LDL + + +P + + + L L+L+ N L
Sbjct: 659 MNLSRNKFDGSIPR---LSKLTQLTQLDLSHNQLDGEIPSQLSSLQS-LDKLDLSHNNLS 714
Query: 176 DLDVATTLGQNLVHLDSLDLSNCHLKGPLSED-AFVNAT 213
L + TT + ++ L ++D+SN L+GPL + F AT
Sbjct: 715 GL-IPTTF-EGMIALTNVDISNNKLEGPLPDTPTFRKAT 751
Score = 152 (58.6 bits), Expect = 7.2e-07, P = 7.2e-07
Identities = 96/372 (25%), Positives = 160/372 (43%)
Query: 13 NLDNPGLITINLN-ANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDL 71
NL N + + LN + P E + S++ L + + L+ P F N T L L L
Sbjct: 388 NLKNLTYLYLYLNYLTGVIPQELGNM--ESMINLDLSQNKLTGSVPDSFGNFTKLESLYL 445
Query: 72 SGNPLR-IIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDW 130
N L I PGV + + L L+L+ N T P L+ + L N L+ I
Sbjct: 446 RVNHLSGAIPPGVANS-SHLTTLILDTNNFTGFFPETVCKGRKLQNISLDYNHLEGPIPK 504
Query: 131 TLV-LGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVH 189
+L +L + L + +G ++ + L ++ + N+ ++++ ++
Sbjct: 505 SLRDCKSLIRARFLGNKFTGDIFEAFGIYPD---LNFIDFSHNKFHG-EISSNWEKS-PK 559
Query: 190 LDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCG 249
L +L +SN ++ G + + + N T+L L LS N L +L A+ LT L RL L
Sbjct: 560 LGALIMSNNNITGAIPTEIW-NMTQLVELDLSTNNLFG-ELPEAIGNLTNLSRLRLNGNQ 617
Query: 250 LS-RLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLK 308
LS R+PA T L+ LD+S N L +++ + S K
Sbjct: 618 LSGRVPAGLSF-LTNLESLDLSSNNFSSEIPQTFDSFLKLHDMNLSRNKFDG-SIPRLSK 675
Query: 309 MTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRL 368
+T L L LS N+L+ +L L L+L++ L+ L T F +++ +
Sbjct: 676 LTQLTQLDLSHNQLDGEIPSQLSSLQSLDKLDLSHNNLSGLIPTTFEGMIALTNVD---I 732
Query: 369 SGNPLH-VLPDS 379
S N L LPD+
Sbjct: 733 SNNKLEGPLPDT 744
Score = 141 (54.7 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 115/465 (24%), Positives = 180/465 (38%)
Query: 41 SLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNL 100
S+ L + + L+ P NL L L L N L P + S+ L L+ L
Sbjct: 271 SMTNLALSQNKLTGSIPSSLGNLKNLTLLSLFQNYLTGGIPPKLGNIESMIDLELSNNKL 330
Query: 101 TYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFAN 160
T PS+ NL +L L L +N L I L GN+ + L L + ++ + F N
Sbjct: 331 TGSIPSSLGNLKNLTILYLYENYLTGVIPPEL--GNMESMIDLQLNNNKLTGSIPSSFGN 388
Query: 161 NTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYL 220
L L L N L + + LG N+ + +LDLS L G + D+F N TKL +LYL
Sbjct: 389 LKNLTYLYLYLNYLTGV-IPQELG-NMESMINLDLSQNKLTGSVP-DSFGNFTKLESLYL 445
Query: 221 SGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTA 280
N LS A + + + L L L + T + LQ + + +N L
Sbjct: 446 RVNHLSGA-IPPGVANSSHLTTLILDTNNFTGFFPETVCKGRKLQNISLDYNHLEGPIPK 504
Query: 281 LLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLE 340
L +SL + F L + S NK S ++ L L
Sbjct: 505 SLRDCKSLIRARFLGNKFTGDIFEAFGIYPDLNFIDFSHNKFHGEISSNWEKSPKLGALI 564
Query: 341 LNNCGLTRLNETVFHENYTYPDLEELRLSGNPLH-VLPDS----TKQYSMRTIPTQIW-- 393
++N +T T E + L EL LS N L LP++ T +R Q+
Sbjct: 565 MSNNNITGAIPT---EIWNMTQLVELDLSTNNLFGELPEAIGNLTNLSRLRLNGNQLSGR 621
Query: 394 --KNFDFLVIL--FILNETVFHENY-----TYPDLEELRLSGNPLH-VLPTGNXXXXXXX 443
FL L L+ F ++ L ++ LS N +P +
Sbjct: 622 VPAGLSFLTNLESLDLSSNNFSSEIPQTFDSFLKLHDMNLSRNKFDGSIPRLSKLTQLTQ 681
Query: 444 XXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSFQ 488
++D P+ ++ +++ L+L++NNLS +F+
Sbjct: 682 LDLSHN----QLDGEIPSQLSSLQSLDKLDLSHNNLSGLIPTTFE 722
>UNIPROTKB|Q5F4C4 [details] [associations]
symbol:SHOC2 "Leucine-rich repeat protein SHOC-2"
species:9031 "Gallus gallus" [GO:0046579 "positive regulation of
Ras protein signal transduction" evidence=ISS] [GO:0019903 "protein
phosphatase binding" evidence=ISS] [GO:0000164 "protein phosphatase
type 1 complex" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] InterPro:IPR001611
InterPro:IPR027036 PROSITE:PS51450 GO:GO:0005634 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875 Pfam:PF12799
GO:GO:0046579 GO:GO:0019903 GO:GO:0000164 HSSP:P07359
HOGENOM:HOG000116557 CTD:8036 PANTHER:PTHR23155:SF38 EMBL:AJ851376
IPI:IPI00600917 RefSeq:NP_001026407.1 UniGene:Gga.42449
ProteinModelPortal:Q5F4C4 GeneID:423894 KEGG:gga:423894
NextBio:20826295 Uniprot:Q5F4C4
Length = 529
Score = 209 (78.6 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 107/392 (27%), Positives = 179/392 (45%)
Query: 57 PQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKT 116
P LT L +L L N L+ + P L +L L L+ +LT + P + DNL L+
Sbjct: 116 PSAVKELTQLTELYLYSNKLQSL-PAEVGCLVNLVTLALSENSLTSL-PDSLDNLKKLRM 173
Query: 117 LELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELID 176
L+L NKL+ + V+ L L TL LR + I+ + ++ + L L++ EN++
Sbjct: 174 LDLRHNKLR---EIPSVVYRLTSLATLYLRFNRITTVEKDIKTLSK-LTMLSIRENKIKQ 229
Query: 177 LDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKP 236
L +G+ L +L +LD+++ L+ L E+ + T++ L L N L DL +
Sbjct: 230 LPAE--IGE-LCNLITLDVAHNQLEH-LPEE-IGSCTQITNLDLQHNEL--LDLPETIGN 282
Query: 237 LTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYS 296
L+ L RL LR LS +P + + + L EL++ +N + LLS L L L + +
Sbjct: 283 LSSLSRLGLRYNRLSAIP-KSLAKCSELDELNLENNNISTLPEGLLSSLVKLTSLTLARN 341
Query: 297 NLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHE 356
Q + +++ +L + N++ + G+F LS L + + LT L F
Sbjct: 342 CFQSYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSL-PLDFG- 399
Query: 357 NYTYPDLEELRLSGNPLHVLPDSTK---QYSMRTIPTQIWKNFDFLV-ILFILNETVFHE 412
T+ + EL L+ N L +P+ + + + K + L L E E
Sbjct: 400 --TWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEE 457
Query: 413 NY--TYP-------DLEELRLSGNPLHVLPTG 435
N + P DL++L L+ N L LP G
Sbjct: 458 NKLESLPNEIAYLKDLQKLVLTNNQLTTLPRG 489
Score = 190 (71.9 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 94/339 (27%), Positives = 149/339 (43%)
Query: 19 LITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRI 78
L T+ L N I VE L L ++E + ++ P L L LD++ N L
Sbjct: 194 LATLYLRFNRITTVEKDIKTLSKLTMLSIRENKIKQL-PAEIGELCNLITLDVAHNQLEH 252
Query: 79 IEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLG 138
+ P T + L L L + P NL+ L L L N+L S I +L
Sbjct: 253 L-PEEIGSCTQITNLDLQHNELLDL-PETIGNLSSLSRLGLRYNRL-SAIPKSLA--KCS 307
Query: 139 KLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNC 198
+LD L+L + IS LP+ + ++ L +L LA N V + ++ SL++ +
Sbjct: 308 ELDELNLENNNISTLPEGLLSSLVKLTSLTLARNCFQSYPVGGPSQFSTIY--SLNMEHN 365
Query: 199 HL-KGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANT 257
+ K P F A L L + N L++ L T + L+L L+++P +
Sbjct: 366 RINKIPFG--IFSRAKVLSKLNMKDNQLTSLPLDFGT--WTSMVELNLATNQLTKIPEDV 421
Query: 258 FHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRS-TFLKMTSLKTLI 316
L+ L +S+N L+ + L L LD+ + L+ + +LK L+ L+
Sbjct: 422 -SGLVSLEVLILSNN-LLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLK--DLQKLV 477
Query: 317 LSGNKLETLESGL--FQNLTHLSVLELNNCGLTRLNETV 353
L+ N+L TL G+ NLTHL + E N LT L E +
Sbjct: 478 LTNNQLTTLPRGIGHLTNLTHLGLGE--NL-LTHLPEEI 513
Score = 180 (68.4 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 102/391 (26%), Positives = 165/391 (42%)
Query: 102 YISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANN 161
++ PSA L L L L NKL+S +G L L TL L ++ +++LPD++ N
Sbjct: 113 HMLPSAVKELTQLTELYLYSNKLQS---LPAEVGCLVNLVTLALSENSLTSLPDSL-DNL 168
Query: 162 TWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLS 221
LR L+L N+L ++ ++ L L +L L + + +D +KL L +
Sbjct: 169 KKLRMLDLRHNKLREIP---SVVYRLTSLATLYLRFNRIT-TVEKD-IKTLSKLTMLSIR 223
Query: 222 GNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTAL 281
N + L + L L L + + L LP T + LD+ HN L+D
Sbjct: 224 ENKIK--QLPAEIGELCNLITLDVAHNQLEHLPEE-IGSCTQITNLDLQHNELLD-LPET 279
Query: 282 LSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLEL 341
+ L SL L + Y+ L I +S K + L L L N + TL GL +L L+ L L
Sbjct: 280 IGNLSSLSRLGLRYNRLSAIPKS-LAKCSELDELNLENNNISTLPEGLLSSLVKLTSLTL 338
Query: 342 -NNC-------GLTRLNETVFHENYTYPDLEELRLS-GNPLHVLPD-STKQYSMRTIPTQ 391
NC G ++ + T++ N + + ++ + VL + K + ++P
Sbjct: 339 ARNCFQSYPVGGPSQFS-TIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLD 397
Query: 392 IWKNFDFLVILFILNE-TVFHENYT-YPDLEELRLSGNPLHVLPTGNXXXXXXXXXXXXX 449
+ + N+ T E+ + LE L LS N L LP G
Sbjct: 398 FGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEE 457
Query: 450 XXXCKIDYLPPNVFNNTRNITSLNLANNNLS 480
K++ LP N +++ L L NN L+
Sbjct: 458 N---KLESLP-NEIAYLKDLQKLVLTNNQLT 484
>MGI|MGI:1914123 [details] [associations]
symbol:Tril "TLR4 interactor with leucine-rich repeats"
species:10090 "Mus musculus" [GO:0001530 "lipopolysaccharide
binding" evidence=ISO] [GO:0002718 "regulation of cytokine
production involved in immune response" evidence=ISO] [GO:0006954
"inflammatory response" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0034142 "toll-like receptor 4 signaling pathway" evidence=ISO]
[GO:0045087 "innate immune response" evidence=IEA] [GO:0046696
"lipopolysaccharide receptor complex" evidence=ISO]
InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:1914123 GO:GO:0016021
GO:GO:0006954 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0045087 InterPro:IPR000372
SMART:SM00013 HSSP:Q9BZR6 GeneTree:ENSGT00700000104056 Pfam:PF01463
CTD:9865 HOVERGEN:HBG066060 EMBL:AK122338 EMBL:AK004681
EMBL:AK033401 EMBL:AK051421 EMBL:BC043099 EMBL:BC059224
IPI:IPI00469248 RefSeq:NP_080093.1 UniGene:Mm.422727
UniGene:Mm.475802 UniGene:Mm.480530 ProteinModelPortal:Q9DBY4
SMR:Q9DBY4 STRING:Q9DBY4 PRIDE:Q9DBY4 Ensembl:ENSMUST00000127748
GeneID:66873 KEGG:mmu:66873 UCSC:uc009bzk.2 OMA:EFPCDRF
OrthoDB:EOG4KWJSW NextBio:322893 Bgee:Q9DBY4 Genevestigator:Q9DBY4
Uniprot:Q9DBY4
Length = 809
Score = 212 (79.7 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 97/312 (31%), Positives = 133/312 (42%)
Query: 13 NLDNP-GLITINLNANPIQPVEGAFLVAR--SLLYLYMQECTLSKINPQFFTNLTTLNKL 69
+L +P ++T +L N I + AF R L L +Q + ++P+ F L+ L +L
Sbjct: 54 SLPSPQDVLTYSLGGNFITNIT-AFDFHRLGQLRRLDLQYNQIRSLHPKTFEKLSRLEEL 112
Query: 70 DLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHID 129
L N L+ + PG PL L L N + +S +F+ L L L L N L + D
Sbjct: 113 YLGNNLLQALVPGTLAPLRKLRILYANGNEIGRLSRGSFEGLESLVKLRLDGNVLGALPD 172
Query: 130 WTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELI-DLDVATTLGQNLV 188
V LG L L L + I L N F+ LR LNL+ NEL L A T L
Sbjct: 173 --AVFAPLGNLLYLHLESNRIRFLGKNAFSQLGKLRFLNLSANELQPSLRHAATFVP-LR 229
Query: 189 HLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNC 248
L +L LS L+ L F + +L L LSGN L+ A L L L L
Sbjct: 230 SLSTLILSANSLQH-LGPRVFQHLPRLGLLSLSGNQLTHL-APEAFWGLEALRELRLEGN 287
Query: 249 GLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLK 308
L++LP L+ LD+S N L A L L + + L +S F
Sbjct: 288 RLNQLPLTLLEPLHSLEALDLSGNELSALHPATFGHQGRLRELSLRDNALSALSGDIFAA 347
Query: 309 MTSLKTLILSGN 320
+L L L GN
Sbjct: 348 SPALYRLDLDGN 359
Score = 185 (70.2 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 91/304 (29%), Positives = 124/304 (40%)
Query: 71 LSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDW 130
L GN + I F L L L L + + P F+ L+ L+ L L N L++ +
Sbjct: 66 LGGNFITNITAFDFHRLGQLRRLDLQYNQIRSLHPKTFEKLSRLEELYLGNNLLQALVPG 125
Query: 131 TLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLD--VATTLGQNLV 188
TL L KL L + I L F L L L N L L V LG NL+
Sbjct: 126 TLA--PLRKLRILYANGNEIGRLSRGSFEGLESLVKLRLDGNVLGALPDAVFAPLG-NLL 182
Query: 189 HLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVA-LKPLTKLHRLSLRN 247
+L L+ + G ++AF KLR L LS N L + A PL L L L
Sbjct: 183 YLH-LESNRIRFLG---KNAFSQLGKLRFLNLSANELQPSLRHAATFVPLRSLSTLILSA 238
Query: 248 CGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFL 307
L L F L L +S N L LE+L L + + L ++ +
Sbjct: 239 NSLQHLGPRVFQHLPRLGLLSLSGNQLTHLAPEAFWGLEALRELRLEGNRLNQLPLTLLE 298
Query: 308 KMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELR 367
+ SL+ L LSGN+L L F + L L L + L+ L+ +F + P L L
Sbjct: 299 PLHSLEALDLSGNELSALHPATFGHQGRLRELSLRDNALSALSGDIFAAS---PALYRLD 355
Query: 368 LSGN 371
L GN
Sbjct: 356 LDGN 359
Score = 177 (67.4 bits), Expect = 9.3e-10, P = 9.3e-10
Identities = 79/308 (25%), Positives = 121/308 (39%)
Query: 237 LTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYS 296
L +L RL L+ + L TF + + L+EL + +N L L+PL L L +
Sbjct: 82 LGQLRRLDLQYNQIRSLHPKTFEKLSRLEELYLGNNLLQALVPGTLAPLRKLRILYANGN 141
Query: 297 NLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHE 356
+ R+SR +F + SL L L GN L L +F L +L L L + + L + F +
Sbjct: 142 EIGRLSRGSFEGLESLVKLRLDGNVLGALPDAVFAPLGNLLYLHLESNRIRFLGKNAFSQ 201
Query: 357 NYTYPDLEELRLSGNPLHV-LPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYT 415
L L LS N L L + +R++ T I L L VF
Sbjct: 202 ---LGKLRFLNLSANELQPSLRHAATFVPLRSLSTLILSANS----LQHLGPRVFQH--- 251
Query: 416 YPDLEELRLSGNPL-HVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNL 474
P L L LSGN L H+ P +++ LP + ++ +L+L
Sbjct: 252 LPRLGLLSLSGNQLTHLAPEAFWGLEALRELRLEGN---RLNQLPLTLLEPLHSLEALDL 308
Query: 475 ANNNLSMTSELSFQFXXXXXXXXXXXXXXXXXTHISPTVLRHNRAITSIKLVGNPWKCDC 534
+ N LS +F +S + + A+ + L GN W CDC
Sbjct: 309 SGNELSALHPATFGHQGRLRELSLRDNALSA---LSGDIFAASPALYRLDLDGNGWTCDC 365
Query: 535 NIADMWEW 542
+ + W
Sbjct: 366 RLRGLKRW 373
>MGI|MGI:2448607 [details] [associations]
symbol:Nyx "nyctalopin" species:10090 "Mus musculus"
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] [GO:0005622
"intracellular" evidence=ISO] [GO:0007601 "visual perception"
evidence=IMP] [GO:0050896 "response to stimulus" evidence=IEA]
MGI:MGI:2448607 GO:GO:0007601 GO:GO:0005578 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0050896
GO:GO:0005622 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
CTD:60506 eggNOG:NOG328516 HOGENOM:HOG000230477 HOVERGEN:HBG031762
KO:K08129 OrthoDB:EOG43JC4W EMBL:AY114303 EMBL:BC035244
EMBL:BC048381 EMBL:AK038912 IPI:IPI00117261 RefSeq:NP_775591.1
UniGene:Mm.90233 ProteinModelPortal:P83503 SMR:P83503 STRING:P83503
PhosphoSite:P83503 PRIDE:P83503 Ensembl:ENSMUST00000050434
GeneID:236690 KEGG:mmu:236690 GeneTree:ENSGT00690000101803
InParanoid:P83503 NextBio:383039 Bgee:P83503 CleanEx:MM_NYX
Genevestigator:P83503 GermOnline:ENSMUSG00000051228 Uniprot:P83503
Length = 476
Score = 208 (78.3 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 74/263 (28%), Positives = 115/263 (43%)
Query: 69 LDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHI 128
+DL N LRI+ F L SL L L NL++I+P AF L L L L+ N ++
Sbjct: 62 IDLDRNGLRILGERAFGTLPSLRRLSLRHNNLSFITPGAFKGLPRLAELRLAHNGELRYL 121
Query: 129 DWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLV 188
LG+L LDL + ++P+ + A LR L +N + V L + L
Sbjct: 122 H-VRTFAALGRLRRLDLAACRLFSVPERLLAELPALRELTAFDN--LFRRVPGAL-RGLA 177
Query: 189 HLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNC 248
+L ++ ++ + + +LR+L L N + A A L L L +
Sbjct: 178 NLTHAHFERSRIEA-VASGSLLGMRRLRSLSLQANRVRAVHAG-AFGDCGALEDLLLNDN 235
Query: 249 GLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLK 308
L+ LPA F L+ L++ N L A S L LE L + +++ + F
Sbjct: 236 LLATLPAAAFRGLRRLRTLNLGGNALGSVARAWFSDLAELELLYLDRNSITFVEEGAFQN 295
Query: 309 MTSLKTLILSGNKLETLESGLFQ 331
++ L L L+GN+L L FQ
Sbjct: 296 LSGLLALHLNGNRLTVLSWAAFQ 318
Score = 153 (58.9 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 81/280 (28%), Positives = 116/280 (41%)
Query: 95 LNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSG-ISNL 153
L+R L + AF L L+ L L N L S I G L +L L L +G + L
Sbjct: 64 LDRNGLRILGERAFGTLPSLRRLSLRHNNL-SFITPGAFKG-LPRLAELRLAHNGELRYL 121
Query: 154 PDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLD-LSNCHLKGPLSEDAFVNA 212
FA LR L+LA L V L L L L N + P + N
Sbjct: 122 HVRTFAALGRLRRLDLAACRLFS--VPERLLAELPALRELTAFDNLFRRVPGALRGLANL 179
Query: 213 TKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHN 272
T + + + A S +L + +L LSL+ + + A F L++L ++ N
Sbjct: 180 THA---HFERSRIEAV-ASGSLLGMRRLRSLSLQANRVRAVHAGAFGDCGALEDLLLNDN 235
Query: 273 PLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQN 332
L A L L L++G + L ++R+ F + L+ L L N + +E G FQN
Sbjct: 236 LLATLPAAAFRGLRRLRTLNLGGNALGSVARAWFSDLAELELLYLDRNSITFVEEGAFQN 295
Query: 333 LTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNP 372
L+ L L LN LT L+ F + L L L NP
Sbjct: 296 LSGLLALHLNGNRLTVLSWAAFQPGFF---LGRLFLFRNP 332
Score = 133 (51.9 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 37/113 (32%), Positives = 59/113 (52%)
Query: 19 LITINLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLR 77
L +++L AN ++ V GAF +L L + + L+ + F L L L+L GN L
Sbjct: 203 LRSLSLQANRVRAVHAGAFGDCGALEDLLLNDNLLATLPAAAFRGLRRLRTLNLGGNALG 262
Query: 78 IIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDW 130
+ F L LE L L+R ++T++ AF NL+ L L L+ N+L + + W
Sbjct: 263 SVARAWFSDLAELELLYLDRNSITFVEEGAFQNLSGLLALHLNGNRL-TVLSW 314
>TAIR|locus:2102499 [details] [associations]
symbol:AT3G56370 species:3702 "Arabidopsis thaliana"
[GO:0004672 "protein kinase activity" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005886 "plasma
membrane" evidence=ISM] [GO:0006468 "protein phosphorylation"
evidence=IEA;ISS] [GO:0007169 "transmembrane receptor protein
tyrosine kinase signaling pathway" evidence=ISS] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000272
"polysaccharide catabolic process" evidence=RCA] [GO:0005982
"starch metabolic process" evidence=RCA] [GO:0007389 "pattern
specification process" evidence=RCA] [GO:0008356 "asymmetric cell
division" evidence=RCA] [GO:0008361 "regulation of cell size"
evidence=RCA] [GO:0009664 "plant-type cell wall organization"
evidence=RCA] [GO:0009832 "plant-type cell wall biogenesis"
evidence=RCA] [GO:0009926 "auxin polar transport" evidence=RCA]
[GO:0010015 "root morphogenesis" evidence=RCA] [GO:0010075
"regulation of meristem growth" evidence=RCA] [GO:0040007 "growth"
evidence=RCA] [GO:0048653 "anther development" evidence=RCA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000719
InterPro:IPR001245 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF07714 PROSITE:PS00107 PROSITE:PS50011 PROSITE:PS51450
GO:GO:0016021 GO:GO:0005524 EMBL:CP002686 SUPFAM:SSF56112
GO:GO:0004672 EMBL:AL163972 InterPro:IPR013210 Pfam:PF08263
EMBL:FJ708741 EMBL:AB076906 EMBL:AB076907 IPI:IPI00542358
PIR:T49038 RefSeq:NP_191196.1 UniGene:At.27880 SMR:Q9LY03
IntAct:Q9LY03 STRING:Q9LY03 EnsemblPlants:AT3G56370.1 GeneID:824804
KEGG:ath:AT3G56370 TAIR:At3g56370 InParanoid:Q9LY03 OMA:VEECVDE
ProtClustDB:CLSN2913456 Genevestigator:Q9LY03 Uniprot:Q9LY03
Length = 964
Score = 213 (80.0 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 108/389 (27%), Positives = 178/389 (45%)
Query: 7 VYNDRRNLDNPGLITINLNANPIQ---PVEGAFLVARSLLYLYMQECTLSKINPQFFTNL 63
+ N L L ++L++N + P E F SL L + + L+ P ++
Sbjct: 108 IINPNMLLSLVNLKVVDLSSNGLSGSLPDE-FFRQCGSLRVLSLAKNKLTGKIPVSISSC 166
Query: 64 TTLNKLDLSGNPLRIIEP-GVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQN 122
++L L+LS N P G++ L +L L L+R L P D LN+L+ L+LS+N
Sbjct: 167 SSLAALNLSSNGFSGSMPLGIWS-LNTLRSLDLSRNELEGEFPEKIDRLNNLRALDLSRN 225
Query: 123 KLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATT 182
+L I + G+ L T+DL ++ +S N F + +LNL +N L + +V
Sbjct: 226 RLSGPIPSEI--GSCMLLKTIDLSENSLSGSLPNTFQQLSLCYSLNLGKNAL-EGEVPKW 282
Query: 183 LGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHR 242
+G+ + L++LDLS G + D+ N L+ L SGN L + L V+ L
Sbjct: 283 IGE-MRSLETLDLSMNKFSGQVP-DSIGNLLALKVLNFSGNGLIGS-LPVSTANCINLLA 339
Query: 243 LSLRNCGLS-RLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRI 301
L L L+ +LP F + +++ N D T ++ ++ LD+ ++
Sbjct: 340 LDLSGNSLTGKLPMWLFQDGS--RDVSALKN---DNSTG---GIKKIQVLDLSHNAFSGE 391
Query: 302 SRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYP 361
+ + L+ L LS N L L HLSVL++++ +LN + E
Sbjct: 392 IGAGLGDLRDLEGLHLSRNSLTGPIPSTIGELKHLSVLDVSH---NQLNGMIPRETGGAV 448
Query: 362 DLEELRLSGNPLHV-LPDSTKQYS-MRTI 388
LEELRL N L +P S K S +R++
Sbjct: 449 SLEELRLENNLLEGNIPSSIKNCSSLRSL 477
Score = 193 (73.0 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 120/438 (27%), Positives = 197/438 (44%)
Query: 63 LTTLNKLDLSGNPLR-IIEPGVFDPLTSLEYLMLNRCNLTYISPSAF-DNLNHLKTLELS 120
L L+KL LS N L II P + L +L+ + L+ L+ P F L+ L L+
Sbjct: 92 LQFLHKLSLSNNNLTGIINPNMLLSLVNLKVVDLSSNGLSGSLPDEFFRQCGSLRVLSLA 151
Query: 121 QNKLKSHIDWTLVLGNLGKLDTLDLRQSGIS-NLPDNVFANNTWLRNLNLAENELIDLDV 179
+NKL I + + + L L+L +G S ++P +++ NT LR+L+L+ NEL + +
Sbjct: 152 KNKLTGKIP--VSISSCSSLAALNLSSNGFSGSMPLGIWSLNT-LRSLDLSRNEL-EGEF 207
Query: 180 ATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTK 239
+ + L +L +LDLS L GP+ + + L+T+ LS N LS + L + L+
Sbjct: 208 PEKIDR-LNNLRALDLSRNRLSGPIPSE-IGSCMLLKTIDLSENSLSGS-LPNTFQQLSL 264
Query: 240 LHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDM-GYSNL 298
+ L+L L L+ LD+S N + L +L+ L+ G +
Sbjct: 265 CYSLNLGKNALEGEVPKWIGEMRSLETLDLSMNKFSGQVPDSIGNLLALKVLNFSGNGLI 324
Query: 299 QRISRSTFLKMTSLKTLILSGNKLE-TLESGLFQNLTH-LSVLELNNC--GLTRLNET-V 353
+ ST +L L LSGN L L LFQ+ + +S L+ +N G+ ++ +
Sbjct: 325 GSLPVST-ANCINLLALDLSGNSLTGKLPMWLFQDGSRDVSALKNDNSTGGIKKIQVLDL 383
Query: 354 FHENYTYP---DLEELR-LSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFI----L 405
H ++ L +LR L G LH+ +S IP+ I + L +L + L
Sbjct: 384 SHNAFSGEIGAGLGDLRDLEG--LHLSRNSLTG----PIPSTIGE-LKHLSVLDVSHNQL 436
Query: 406 NETVFHENYTYPDLEELRLSGNPLHV-LPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFN 464
N + E LEELRL N L +P+ + +PP +
Sbjct: 437 NGMIPRETGGAVSLEELRLENNLLEGNIPSSIKNCSSLRSLILSHNKL--LGSIPPELAK 494
Query: 465 NTRNITSLNLANNNLSMT 482
TR + ++L+ N L+ T
Sbjct: 495 LTR-LEEVDLSFNELAGT 511
Score = 160 (61.4 bits), Expect = 8.1e-08, P = 8.1e-08
Identities = 110/404 (27%), Positives = 159/404 (39%)
Query: 41 SLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNL 100
SL L + S P +L TL LDLS N L P D L +L L L+R L
Sbjct: 168 SLAALNLSSNGFSGSMPLGIWSLNTLRSLDLSRNELEGEFPEKIDRLNNLRALDLSRNRL 227
Query: 101 TYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFAN 160
+ PS + LKT++LS+N L + T L +L+L ++ +
Sbjct: 228 SGPIPSEIGSCMLLKTIDLSENSLSGSLPNTFQ--QLSLCYSLNLGKNALEGEVPKWIGE 285
Query: 161 NTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYL 220
L L+L+ N+ V ++G NL+ L L+ S L G L N L L L
Sbjct: 286 MRSLETLDLSMNKFSG-QVPDSIG-NLLALKVLNFSGNGLIGSLPVST-ANCINLLALDL 342
Query: 221 SGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTA 280
SGN L+ L + L +L+N N+ +Q LD+SHN A
Sbjct: 343 SGNSLTGK-LPMWLFQDGSRDVSALKN-------DNSTGGIKKIQVLDLSHNAFSGEIGA 394
Query: 281 LLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLE 340
L L LE L + ++L ST ++ L L +S N+L + L L
Sbjct: 395 GLGDLRDLEGLHLSRNSLTGPIPSTIGELKHLSVLDVSHNQLNGMIPRETGGAVSLEELR 454
Query: 341 LNNCGLTRLNETVFHENYTYPDLEELRLSGNPL--HVLPDSTKQYSMR-----------T 387
L N L N +N + L L LS N L + P+ K + T
Sbjct: 455 LEN-NLLEGNIPSSIKNCS--SLRSLILSHNKLLGSIPPELAKLTRLEEVDLSFNELAGT 511
Query: 388 IPTQIWKNFDFLVILFILNETVFHE---NYTYPDLEELRLSGNP 428
+P Q+ N +L I + +F E + L +SGNP
Sbjct: 512 LPKQL-ANLGYLHTFNISHNHLFGELPAGGIFNGLSPSSVSGNP 554
>UNIPROTKB|G3N2B1 [details] [associations]
symbol:PHLPP1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0009649 "entrainment of circadian clock" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR001932 Pfam:PF00481 PROSITE:PS51450
SMART:SM00332 GO:GO:0003824 GO:GO:0009649 GO:GO:0008152
Gene3D:3.60.40.10 SUPFAM:SSF81606 GeneTree:ENSGT00440000037833
OMA:CCELSAG EMBL:DAAA02057241 EMBL:DAAA02057242 EMBL:DAAA02057243
EMBL:DAAA02057244 Ensembl:ENSBTAT00000066319 Uniprot:G3N2B1
Length = 1176
Score = 214 (80.4 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 118/444 (26%), Positives = 196/444 (44%)
Query: 17 PGLITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPL 76
P L +N++ N ++ V A + A L ++ + + P N+ L+ L LS N
Sbjct: 198 PTLAELNMSCNALRAVPAA-VGAMHNLQTFLLDGNFLQTLPAELENMHQLSYLGLSFNEF 256
Query: 77 RIIEPGVFDPLTSLEYL-MLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHI-DWTLVL 134
+ P V LT++E L M C T + A + H+K ++L N +++ I D L
Sbjct: 257 TDL-PEVLQKLTAVEKLCMSGNCVGT-LRLQALRKMPHIKHVDLRLNVIRNLIADGVDFL 314
Query: 135 GNLGKLDTLDLRQSGI-----SNLP------DNVFANNT---WLRNLNLAENELIDLDVA 180
++ +LD D + G+ +NL + + N +L+ L + NEL+ LDV
Sbjct: 315 PHVTQLDLRDNKLEGLDAVVFTNLEVLHCERNQLVTLNACGCFLKALYASSNELVQLDVC 374
Query: 181 TTLGQNLVHLDSLDLS-NCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTK 239
N +L +D+S NC P + + KL L + N + +L L +
Sbjct: 375 PV--PN--YLSYMDVSRNCLENVP---EWVCESRKLEVLDIGHNQI--CELPARLFCNSS 425
Query: 240 LHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQ 299
L +L + ++RLP + R T ++ LD+ HN L++ +LL +SL L+ + L+
Sbjct: 426 LRKLLAGHNRMARLP-ESLER-TSVEVLDVQHNQLLELPPSLLMKADSLRFLNASANKLE 483
Query: 300 RISRSTFLKMTS--LKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHEN 357
+ +T + T+ L+ L L+ N L L HL VL + RL +
Sbjct: 484 TLPPATLSEETNSILQELYLTNNNLTDKCVSLLTGHPHLKVLHM---AYNRLQSFPASKM 540
Query: 358 YTYPDLEELRLSGNPLHVLPDSTKQYS-MRTIPT-----QIWKNFDFL-----VILFI-- 404
+LEE+ LSGN L +P + M T+ +++ L V L
Sbjct: 541 AKLEELEEIDLSGNKLKAVPTTIMNCRRMHTVTAHSNCIEVFPEVMQLPEIKCVDLSCNE 600
Query: 405 LNETVFHENYTYPDLEELRLSGNP 428
L+E EN P L+EL L+GNP
Sbjct: 601 LSEVTLPENLP-PKLQELDLTGNP 623
Score = 169 (64.5 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 88/336 (26%), Positives = 144/336 (42%)
Query: 63 LTTLNKLDLSGNPLRIIEPGVFDPLTSL-----EYLMLNRCNL----TYISPSAFDNL-- 111
L + +LDL N L ++ VF L L + + LN C Y S + L
Sbjct: 314 LPHVTQLDLRDNKLEGLDAVVFTNLEVLHCERNQLVTLNACGCFLKALYASSNELVQLDV 373
Query: 112 ----NHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNL 167
N+L +++S+N L++ +W KL+ LD+ + I LP +F N++ LR L
Sbjct: 374 CPVPNYLSYMDVSRNCLENVPEWVC---ESRKLEVLDIGHNQICELPARLFCNSS-LRKL 429
Query: 168 NLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSA 227
N + L +L + V + LD+ + L L + A LR L S N L
Sbjct: 430 LAGHNRMARLP--ESLERTSVEV--LDVQHNQLL-ELPPSLLMKADSLRFLNASANKLET 484
Query: 228 ---ADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSP 284
A LS + L L L N L+ + L+ L +++N L + ++
Sbjct: 485 LPPATLSEETNSI--LQELYLTNNNLTDKCVSLLTGHPHLKVLHMAYNRLQSFPASKMAK 542
Query: 285 LESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNC 344
LE LE +D+ + L+ + +T + + T+ N +E + L + ++L+ C
Sbjct: 543 LEELEEIDLSGNKLKAVP-TTIMNCRRMHTVTAHSNCIEVFPEVM--QLPEIKCVDLS-C 598
Query: 345 GLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDST 380
L+E EN P L+EL L+GNP L T
Sbjct: 599 N--ELSEVTLPENLP-PKLQELDLTGNPRLALDHRT 631
Score = 152 (58.6 bits), Expect = 7.6e-07, P = 7.6e-07
Identities = 103/396 (26%), Positives = 165/396 (41%)
Query: 57 PQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKT 116
P N+ TL +L++S N LR + P + +L+ +L+ N P+ +N++ L
Sbjct: 191 PLAVCNIPTLAELNMSCNALRAV-PAAVGAMHNLQTFLLDG-NFLQTLPAELENMHQLSY 248
Query: 117 LELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELID 176
L LS N+ D VL L ++ L + + + L +++++L N + +
Sbjct: 249 LGLSFNEFT---DLPEVLQKLTAVEKLCMSGNCVGTLRLQALRKMPHIKHVDLRLNVIRN 305
Query: 177 LDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKL-----------------RTLY 219
L +A + L H+ LDL + L+G L F N L + LY
Sbjct: 306 L-IADGV-DFLPHVTQLDLRDNKLEG-LDAVVFTNLEVLHCERNQLVTLNACGCFLKALY 362
Query: 220 LSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFT 279
S N L D+ L+ + +S RNC L +P L+ LDI HN + +
Sbjct: 363 ASSNELVQLDVCPVPNYLSYMD-VS-RNC-LENVPEWVCESRK-LEVLDIGHNQICE-LP 417
Query: 280 ALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVL 339
A L SL L G++ + R+ S L+ TS++ L + N+L L L L L
Sbjct: 418 ARLFCNSSLRKLLAGHNRMARLPES--LERTSVEVLDVQHNQLLELPPSLLMKADSLRFL 475
Query: 340 ELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFL 399
+ L L E T L+EL L+ N L + K S+ T + L
Sbjct: 476 NASANKLETLPPATLSEE-TNSILQELYLTNNNL-----TDKCVSLLTGHPHL----KVL 525
Query: 400 VILFI-LNETVFHENYTYPDLEELRLSGNPLHVLPT 434
+ + L + +LEE+ LSGN L +PT
Sbjct: 526 HMAYNRLQSFPASKMAKLEELEEIDLSGNKLKAVPT 561
Score = 132 (51.5 bits), Expect = 0.00011, P = 0.00011
Identities = 65/222 (29%), Positives = 95/222 (42%)
Query: 139 KLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELID---LDVATTLG--QNLVHLDSL 193
++ ++DL + +LP N+F + L +LNL +N L L A L Q L SL
Sbjct: 122 RISSVDLSCCSLEHLPANLFYSQD-LTHLNLKQNFLRQNPSLPTARGLSELQRFTKLKSL 180
Query: 194 DLSNCHLKG-PLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSR 252
+LSN HL PL A N L L +S N L A +V + L L L
Sbjct: 181 NLSNNHLGDFPL---AVCNIPTLAELNMSCNALRAVPAAVGA--MHNLQTFLLDGNFLQT 235
Query: 253 LPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSL 312
LPA L L +S N D +L L ++E L M + + + KM +
Sbjct: 236 LPAE-LENMHQLSYLGLSFNEFTD-LPEVLQKLTAVEKLCMSGNCVGTLRLQALRKMPHI 293
Query: 313 KTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVF 354
K + L N + L + L H++ L+L + L L+ VF
Sbjct: 294 KHVDLRLNVIRNLIADGVDFLPHVTQLDLRDNKLEGLDAVVF 335
>RGD|1304866 [details] [associations]
symbol:Lrrtm3 "leucine rich repeat transmembrane neuronal 3"
species:10116 "Rattus norvegicus" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001611 PROSITE:PS51450
RGD:1304866 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GeneTree:ENSGT00700000104056 EMBL:CH473988 CTD:347731
OrthoDB:EOG45TCMT IPI:IPI00869756 RefSeq:NP_001099857.1
UniGene:Rn.214114 Ensembl:ENSRNOT00000033980 GeneID:294380
KEGG:rno:294380 UCSC:RGD:1304866 NextBio:638086 Uniprot:D3ZAL8
Length = 582
Score = 186 (70.5 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 73/278 (26%), Positives = 121/278 (43%)
Query: 150 ISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAF 209
+ +P ++ A L+L N L L G N L L L + H+ + E+AF
Sbjct: 52 LQEIPSSISAG---CLGLSLRYNSLQKLKYNQFKGLN--QLTWLYLDHNHISN-IDENAF 105
Query: 210 VNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDI 269
+L+ L LS N +S L+ +P+T L L L L L + F L L +
Sbjct: 106 NGIRRLKELILSSNRISYF-LNNTFRPVTNLRNLDLSYNQLHSLGSEQFRGLRKLLSLHL 164
Query: 270 SHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGL 329
N L + +LE LD+GY+ ++ ++R+ F M LK L L N+ L L
Sbjct: 165 RSNSLRTIPVRIFQDCRNLELLDLGYNRIRSLARNVFAGMIRLKELHLEHNQFSKLNLAL 224
Query: 330 FQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIP 389
F L L L + ++ + +T+ ++T+ L+ L LSGN + + + +P
Sbjct: 225 FPRLVSLQNLYMQWNKISVIGQTM---SWTWSSLQRLDLSGNEIEAFSGPSV---FQCVP 278
Query: 390 TQIWKNFDFLVILFILNETVFHENYTYPDLEELRLSGN 427
N D + FI E + ++ L ++ L+GN
Sbjct: 279 NLQRLNLDSNKLTFIGQEILD----SWISLNDISLAGN 312
Score = 174 (66.3 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 66/256 (25%), Positives = 115/256 (44%)
Query: 18 GLITINLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPL 76
G + ++L N +Q ++ F L +LY+ +S I+ F + L +L LS N +
Sbjct: 62 GCLGLSLRYNSLQKLKYNQFKGLNQLTWLYLDHNHISNIDENAFNGIRRLKELILSSNRI 121
Query: 77 RIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGN 136
F P+T+L L L+ L + F L L +L L N L++ I + +
Sbjct: 122 SYFLNNTFRPVTNLRNLDLSYNQLHSLGSEQFRGLRKLLSLHLRSNSLRT-IP-VRIFQD 179
Query: 137 LGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLS 196
L+ LDL + I +L NVFA L+ L+L N+ L++A L LV L +L +
Sbjct: 180 CRNLELLDLGYNRIRSLARNVFAGMIRLKELHLEHNQFSKLNLA--LFPRLVSLQNLYMQ 237
Query: 197 NCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPAN 256
+ + + + L+ L LSGN + A + + L RL+L + L+ +
Sbjct: 238 WNKIS-VIGQTMSWTWSSLQRLDLSGNEIEAFSGPSVFQCVPNLQRLNLDSNKLTFIGQE 296
Query: 257 TFHRFTCLQELDISHN 272
+ L ++ ++ N
Sbjct: 297 ILDSWISLNDISLAGN 312
Score = 154 (59.3 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 75/319 (23%), Positives = 137/319 (42%)
Query: 38 VARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNR 97
++ L L ++ +L K+ F L L L L N + I+ F+ + L+ L+L+
Sbjct: 59 ISAGCLGLSLRYNSLQKLKYNQFKGLNQLTWLYLDHNHISNIDENAFNGIRRLKELILSS 118
Query: 98 CNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNV 157
++Y + F + +L+ L+LS N+L S + G L KL +L LR + + +P +
Sbjct: 119 NRISYFLNNTFRPVTNLRNLDLSYNQLHS-LGSEQFRG-LRKLLSLHLRSNSLRTIPVRI 176
Query: 158 FANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRT 217
F + L L+L N + L A + ++ L L L + L+ F L+
Sbjct: 177 FQDCRNLELLDLGYNRIRSL--ARNVFAGMIRLKELHLEHNQFS-KLNLALFPRLVSLQN 233
Query: 218 LYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPA-NTFHRFTCLQELDISHNPLID 276
LY+ N +S +++ + L RL L + + F LQ L++ N L
Sbjct: 234 LYMQWNKISVIGQTMSWT-WSSLQRLDLSGNEIEAFSGPSVFQCVPNLQRLNLDSNKLTF 292
Query: 277 AFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHL 336
+L SL + + N+ SR+ + LK+ G + T+ + L +
Sbjct: 293 IGQEILDSWISLNDISLA-GNIWECSRNICSLVNWLKSF--KGLRENTILCASPKELQGV 349
Query: 337 SVLE-LNN---CGLTRLNE 351
+V++ + N CG + E
Sbjct: 350 NVIDAVKNYSICGKSTTTE 368
Score = 141 (54.7 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 56/245 (22%), Positives = 105/245 (42%)
Query: 235 KPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMG 294
K L +L L L + +S + N F+ L+EL +S N + P+ +L +LD+
Sbjct: 82 KGLNQLTWLYLDHNHISNIDENAFNGIRRLKELILSSNRISYFLNNTFRPVTNLRNLDLS 141
Query: 295 YSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVF 354
Y+ L + F + L +L L N L T+ +FQ+ +L +L+L + L VF
Sbjct: 142 YNQLHSLGSEQFRGLRKLLSLHLRSNSLRTIPVRIFQDCRNLELLDLGYNRIRSLARNVF 201
Query: 355 HENYTYPDLEELRLSGNPLHVLPDST--KQYSMRTIPTQIWKNFDFLVILFILNETVFHE 412
L+EL L N L + + S++ + Q W ++ +T+
Sbjct: 202 AGMIR---LKELHLEHNQFSKLNLALFPRLVSLQNLYMQ-WNKIS------VIGQTM--- 248
Query: 413 NYTYPDLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSL 472
++T+ L+ L LSGN + +G K+ ++ + ++ ++ +
Sbjct: 249 SWTWSSLQRLDLSGNEIEAF-SGPSVFQCVPNLQRLNLDSNKLTFIGQEILDSWISLNDI 307
Query: 473 NLANN 477
+LA N
Sbjct: 308 SLAGN 312
Score = 114 (45.2 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 59/243 (24%), Positives = 99/243 (40%)
Query: 243 LSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRIS 302
LSLR L +L N F L L + HN + + + + L+ L + + +
Sbjct: 66 LSLRYNSLQKLKYNQFKGLNQLTWLYLDHNHISNIDENAFNGIRRLKELILSSNRISYFL 125
Query: 303 RSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPD 362
+TF +T+L+ L LS N+L +L S F+ L L L L + L + +F + +
Sbjct: 126 NNTFRPVTNLRNLDLSYNQLHSLGSEQFRGLRKLLSLHLRSNSLRTIPVRIFQD---CRN 182
Query: 363 LEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTYPDLEEL 422
LE L L N + L + +R + N F LN +F + L+ L
Sbjct: 183 LELLDLGYNRIRSLARNVFAGMIRLKELHLEHN-QFSK----LNLALFPRLVS---LQNL 234
Query: 423 RLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKID-YLPPNVFNNTRNITSLNLANNNLSM 481
+ N + V+ G +I+ + P+VF N+ LNL +N L+
Sbjct: 235 YMQWNKISVI--GQTMSWTWSSLQRLDLSGNEIEAFSGPSVFQCVPNLQRLNLDSNKLTF 292
Query: 482 TSE 484
+
Sbjct: 293 IGQ 295
Score = 71 (30.1 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 42/178 (23%), Positives = 69/178 (38%)
Query: 507 THISPTVLRHNRAITSIKLVGNPWKCDCNIADMWEWATREKGDIGVLVGSTTPTEI-GFG 565
T I +L ++ I L GN W+C NI + W KG + +P E+ G
Sbjct: 291 TFIGQEILDSWISLNDISLAGNIWECSRNICSLVNWLKSFKGLRENTILCASPKELQGVN 350
Query: 566 ASRKKKGL-VCYFDIFTTPTRKRPGRELFASTNKTWARYVKEADCPSSKLFRPPRTNSRK 624
K +C TT R R L T K K P PP + +
Sbjct: 351 VIDAVKNYSICGKS--TTTERFDLARALPKPTFKPKLPRPKHESKPPL----PPTVGASE 404
Query: 625 TRAAPSYINMEKLNSKSFLTLGNFGL-ISVGVIILSAMVYFSFYARHLYRTKQQRIRR 681
+ + ++ E ++ + G+ L +SV VI+L V + Y + + +Q+ + R
Sbjct: 405 P-SPETDVDTEHISFHKIIA-GSVALFLSVLVILLVMYVSWKRYPASMKQLQQRSLMR 460
>RGD|1310827 [details] [associations]
symbol:Tril "TLR4 interactor with leucine-rich repeats"
species:10116 "Rattus norvegicus" [GO:0001530 "lipopolysaccharide
binding" evidence=ISO] [GO:0002718 "regulation of cytokine
production involved in immune response" evidence=ISO] [GO:0006954
"inflammatory response" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0034142 "toll-like receptor 4 signaling
pathway" evidence=ISO] [GO:0045087 "innate immune response"
evidence=IEA] [GO:0046696 "lipopolysaccharide receptor complex"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
RGD:1310827 GO:GO:0016021 GO:GO:0006954 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0045087 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00700000104056 Pfam:PF01463 HSSP:P07359 CTD:9865
HOVERGEN:HBG066060 OMA:EFPCDRF OrthoDB:EOG4KWJSW EMBL:BC100659
IPI:IPI00358213 RefSeq:NP_001029182.1 UniGene:Rn.25045
STRING:Q496Z2 Ensembl:ENSRNOT00000036951 GeneID:362364
KEGG:rno:362364 UCSC:RGD:1310827 InParanoid:Q496Z2 NextBio:679662
Genevestigator:Q496Z2 Uniprot:Q496Z2
Length = 811
Score = 211 (79.3 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 97/312 (31%), Positives = 132/312 (42%)
Query: 13 NLDNP-GLITINLNANPIQPVEGAFLVAR--SLLYLYMQECTLSKINPQFFTNLTTLNKL 69
+L +P ++T +L N I + AF R L L +Q + ++P+ F L+ L +L
Sbjct: 54 SLPSPQDVLTYSLGGNFITNIT-AFDFHRLGQLRRLDLQYNQIRSLHPKTFEKLSRLEEL 112
Query: 70 DLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHID 129
L N L+ + PG PL L L N + +S +F+ L L L L N L + D
Sbjct: 113 YLGNNLLQALAPGTLAPLRKLRILYANGNEIGRLSRGSFEGLESLVKLRLDGNVLGALPD 172
Query: 130 WTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELI-DLDVATTLGQNLV 188
V LG L L L + I L N F LR LNL+ NEL L A T L
Sbjct: 173 --AVFAPLGNLLYLHLEANRIRFLGKNAFTQLGKLRFLNLSANELQPSLRHAATFVP-LR 229
Query: 189 HLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNC 248
L +L LS L+ L F + +L L LSGN L+ A L L L L
Sbjct: 230 SLSTLILSANSLQH-LGPRVFQHLPRLGLLSLSGNQLTHL-APEAFWGLEALRELRLEGN 287
Query: 249 GLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLK 308
L++LP L+ LD+S N L A L L + + L +S F
Sbjct: 288 RLNQLPLTLLEPLHSLEALDLSGNELSALHPATFGHQGRLRELSLRDNALSALSGDIFAA 347
Query: 309 MTSLKTLILSGN 320
+L L L GN
Sbjct: 348 SPALYRLDLDGN 359
Score = 184 (69.8 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 91/304 (29%), Positives = 123/304 (40%)
Query: 71 LSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDW 130
L GN + I F L L L L + + P F+ L+ L+ L L N L++
Sbjct: 66 LGGNFITNITAFDFHRLGQLRRLDLQYNQIRSLHPKTFEKLSRLEELYLGNNLLQALAPG 125
Query: 131 TLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLD--VATTLGQNLV 188
TL L KL L + I L F L L L N L L V LG NL+
Sbjct: 126 TLA--PLRKLRILYANGNEIGRLSRGSFEGLESLVKLRLDGNVLGALPDAVFAPLG-NLL 182
Query: 189 HLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVA-LKPLTKLHRLSLRN 247
+L L+ + G ++AF KLR L LS N L + A PL L L L
Sbjct: 183 YLH-LEANRIRFLG---KNAFTQLGKLRFLNLSANELQPSLRHAATFVPLRSLSTLILSA 238
Query: 248 CGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFL 307
L L F L L +S N L LE+L L + + L ++ +
Sbjct: 239 NSLQHLGPRVFQHLPRLGLLSLSGNQLTHLAPEAFWGLEALRELRLEGNRLNQLPLTLLE 298
Query: 308 KMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELR 367
+ SL+ L LSGN+L L F + L L L + L+ L+ +F + P L L
Sbjct: 299 PLHSLEALDLSGNELSALHPATFGHQGRLRELSLRDNALSALSGDIFAAS---PALYRLD 355
Query: 368 LSGN 371
L GN
Sbjct: 356 LDGN 359
Score = 172 (65.6 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 79/308 (25%), Positives = 120/308 (38%)
Query: 237 LTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYS 296
L +L RL L+ + L TF + + L+EL + +N L L+PL L L +
Sbjct: 82 LGQLRRLDLQYNQIRSLHPKTFEKLSRLEELYLGNNLLQALAPGTLAPLRKLRILYANGN 141
Query: 297 NLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHE 356
+ R+SR +F + SL L L GN L L +F L +L L L + L + F +
Sbjct: 142 EIGRLSRGSFEGLESLVKLRLDGNVLGALPDAVFAPLGNLLYLHLEANRIRFLGKNAFTQ 201
Query: 357 NYTYPDLEELRLSGNPLHV-LPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYT 415
L L LS N L L + +R++ T I L L VF
Sbjct: 202 ---LGKLRFLNLSANELQPSLRHAATFVPLRSLSTLILSANS----LQHLGPRVFQH--- 251
Query: 416 YPDLEELRLSGNPL-HVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNL 474
P L L LSGN L H+ P +++ LP + ++ +L+L
Sbjct: 252 LPRLGLLSLSGNQLTHLAPEAFWGLEALRELRLEGN---RLNQLPLTLLEPLHSLEALDL 308
Query: 475 ANNNLSMTSELSFQFXXXXXXXXXXXXXXXXXTHISPTVLRHNRAITSIKLVGNPWKCDC 534
+ N LS +F +S + + A+ + L GN W CDC
Sbjct: 309 SGNELSALHPATFGHQGRLRELSLRDNALSA---LSGDIFAASPALYRLDLDGNGWTCDC 365
Query: 535 NIADMWEW 542
+ + W
Sbjct: 366 RLRGLKRW 373
>ZFIN|ZDB-GENE-040219-7 [details] [associations]
symbol:tlr3 "toll-like receptor 3" species:7955
"Danio rerio" [GO:0032722 "positive regulation of chemokine
production" evidence=IEA] [GO:0043330 "response to exogenous dsRNA"
evidence=IEA] [GO:0050729 "positive regulation of inflammatory
response" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0034138 "toll-like receptor 3 signaling pathway"
evidence=IEA] [GO:0045087 "innate immune response" evidence=IEA]
[GO:0051607 "defense response to virus" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0001819 "positive
regulation of cytokine production" evidence=IEA] [GO:0002756
"MyD88-independent toll-like receptor signaling pathway"
evidence=IEA] [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0004888 "transmembrane signaling receptor
activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009615 "response to virus" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0009617 "response to bacterium"
evidence=IDA] InterPro:IPR000157 InterPro:IPR001611
InterPro:IPR027173 Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450
ZFIN:ZDB-GENE-040219-7 GO:GO:0016021 GO:GO:0007165 GO:GO:0009617
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005622 GO:GO:0009615 InterPro:IPR000372 SMART:SM00013
InterPro:IPR026906 Pfam:PF13306 SUPFAM:SSF52200 HOVERGEN:HBG023181
PANTHER:PTHR24365:SF5 EMBL:AY616582 IPI:IPI00510961
UniGene:Dr.82491 ProteinModelPortal:Q6IWL5 STRING:Q6IWL5
InParanoid:Q6IWL5 Uniprot:Q6IWL5
Length = 903
Score = 211 (79.3 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 84/307 (27%), Positives = 140/307 (45%)
Query: 42 LLYLYMQECTLSKINPQFFTNLTTLNKLDLSGN--PLRIIEPGVFDPLTS---LEYLMLN 96
L YL M ++ Q F+ L L LDLS + ++ + F L L+ L L
Sbjct: 355 LEYLCMANTAFRELTEQIFSGLRNLKTLDLSWSITGIKTVTNKTFAGLKESPLLQTLNLT 414
Query: 97 RCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLG--NLGKLDTLDLRQSGISNLP 154
+ + P AF + +L L +S+N + + G N+ ++D + + Q IS L
Sbjct: 415 GMGINKLEPGAFSSFGNLSNLLMSRNFINQQLQGNEFKGLSNIKEID-MSINQQSIS-LT 472
Query: 155 DNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSN---CHLKGPLSEDAF-V 210
+ F + + LR L L LD+ + + LV+L LDLSN ++ G L E + +
Sbjct: 473 NASFVHVSTLRILKLGRALKGTLDMEPSPFRPLVNLTILDLSNNNIANINGDLLEGLYNL 532
Query: 211 NATKLR-----TLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQ 265
K++ L+ NP + LK T L L+L G+ +P N F F+ L
Sbjct: 533 KVVKMQHNNLARLWKMANPGGPV---LFLKDATNLSYLNLDYNGIDEIPPNAFRGFSELH 589
Query: 266 ELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTF-LKMTSLKTLILSGNKLE- 323
EL + N L ++ L SL++L + + + + R+TF + ++ LK L + N +
Sbjct: 590 ELSLRGNLLDQLHASVFDDLNSLKYLHLQKNLITSVQRATFGVPLSKLKELYMDHNPFDC 649
Query: 324 TLESGLF 330
T ES L+
Sbjct: 650 TCESILW 656
Score = 209 (78.6 bits), Expect = 3.7e-13, P = 3.7e-13
Identities = 88/339 (25%), Positives = 145/339 (42%)
Query: 62 NLTTLN---KLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLE 118
NL LN L S L +I+ F L LEYL + ++ F L +LKTL+
Sbjct: 324 NLRQLNLRKALIKSHASLPVIDDFSFQHLVQLEYLCMANTAFRELTEQIFSGLRNLKTLD 383
Query: 119 LSQN--KLKSHIDWTLV-LGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELI 175
LS + +K+ + T L L TL+L GI+ L F++ L NL ++ N I
Sbjct: 384 LSWSITGIKTVTNKTFAGLKESPLLQTLNLTGMGINKLEPGAFSSFGNLSNLLMSRN-FI 442
Query: 176 DLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAA-DLSVA- 233
+ + + L ++ +D+S L+ +FV+ + LR L L G L D+ +
Sbjct: 443 NQQLQGNEFKGLSNIKEIDMSINQQSISLTNASFVHVSTLRILKL-GRALKGTLDMEPSP 501
Query: 234 LKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAF--------TALLSPL 285
+PL L L L N ++ + + L+ + + HN L + L
Sbjct: 502 FRPLVNLTILDLSNNNIANINGDLLEGLYNLKVVKMQHNNLARLWKMANPGGPVLFLKDA 561
Query: 286 ESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCG 345
+L +L++ Y+ + I + F + L L L GN L+ L + +F +L L L L
Sbjct: 562 TNLSYLNLDYNGIDEIPPNAFRGFSELHELSLRGNLLDQLHASVFDDLNSLKYLHLQKNL 621
Query: 346 LTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQYS 384
+T + F L+EL + NP +S +S
Sbjct: 622 ITSVQRATF--GVPLSKLKELYMDHNPFDCTCESILWFS 658
Score = 181 (68.8 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 93/363 (25%), Positives = 160/363 (44%)
Query: 12 RNLDNPGLITINLNANPIQP-VEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLD 70
+ L+ + ++L+ N I V+GAF L +L ++ T+ + F+ L L +L+
Sbjct: 270 QGLEKTKITVLDLSENRISKIVDGAFQWLPQLEFLSLEHNTIRHLTNDSFSGLGNLRQLN 329
Query: 71 L------SGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQN-- 122
L S L +I+ F L LEYL + ++ F L +LKTL+LS +
Sbjct: 330 LRKALIKSHASLPVIDDFSFQHLVQLEYLCMANTAFRELTEQIFSGLRNLKTLDLSWSIT 389
Query: 123 KLKSHIDWTLV-LGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVAT 181
+K+ + T L L TL+L GI+ L F++ L NL ++ N I+ +
Sbjct: 390 GIKTVTNKTFAGLKESPLLQTLNLTGMGINKLEPGAFSSFGNLSNLLMSRN-FINQQLQG 448
Query: 182 TLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLH 241
+ L ++ +D+S L+ +FV+ + LR L L G L L + P L
Sbjct: 449 NEFKGLSNIKEIDMSINQQSISLTNASFVHVSTLRILKL-GRALKGT-LDMEPSPFRPLV 506
Query: 242 RLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRI 301
L++ LD+S+N + + LL L +L+ + M ++NL R+
Sbjct: 507 NLTI---------------------LDLSNNNIANINGDLLEGLYNLKVVKMQHNNLARL 545
Query: 302 SRST-------FLK-MTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETV 353
+ FLK T+L L L N ++ + F+ + L L L L +L+ +V
Sbjct: 546 WKMANPGGPVLFLKDATNLSYLNLDYNGIDEIPPNAFRGFSELHELSLRGNLLDQLHASV 605
Query: 354 FHE 356
F +
Sbjct: 606 FDD 608
Score = 170 (64.9 bits), Expect = 6.2e-09, P = 6.2e-09
Identities = 99/374 (26%), Positives = 166/374 (44%)
Query: 19 LITINLNANPIQPVEGAFLVARS-LLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLR 77
L+ I+ + N + +E ++ L +L Q + I+ + N L +LDLS N L+
Sbjct: 78 LVNIDASYNSLAGIEKDLCLSLPHLQFLNAQHNQVYLISEKDLKNCFHLTQLDLSDNKLK 137
Query: 78 II-EPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLK--SHIDWTLVL 134
+ EP F L +L +L ++R LT L +L TL LS N + D++ L
Sbjct: 138 LQGEP--FSLLKNLTWLDVSRNKLTSAKLGTEPQLPNLVTLVLSGNNINILQKNDFSF-L 194
Query: 135 GNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVH--LDS 192
N L L + + + F L +L L ++L T+L + L L +
Sbjct: 195 SNSSSFRVLILSSLILKKVENGCFKAIDTLYDLVLDSSKLTS-QFTTSLFEELADTALRN 253
Query: 193 LDLSNCHLKGPLSEDAF--VNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGL 250
L L + + LS F + TK+ L LS N +S + A + L +L LSL + +
Sbjct: 254 LSLKSTE-QVTLSNTTFQGLEKTKITVLDLSENRISKI-VDGAFQWLPQLEFLSLEHNTI 311
Query: 251 SRLPANTFHRFTCLQELDI------SHN--PLIDAFTALLSPLESLEHLDMGYSNLQRIS 302
L ++F L++L++ SH P+ID F+ L LE+L M + + ++
Sbjct: 312 RHLTNDSFSGLGNLRQLNLRKALIKSHASLPVIDDFS--FQHLVQLEYLCMANTAFRELT 369
Query: 303 RSTFLKMTSLKTLILSGN--KLETLESGLFQNLTH---LSVLELNNCGLTRLNETVFHEN 357
F + +LKTL LS + ++T+ + F L L L L G+ +L F
Sbjct: 370 EQIFSGLRNLKTLDLSWSITGIKTVTNKTFAGLKESPLLQTLNLTGMGINKLEPGAFS-- 427
Query: 358 YTYPDLEELRLSGN 371
++ +L L +S N
Sbjct: 428 -SFGNLSNLLMSRN 440
Score = 157 (60.3 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 84/354 (23%), Positives = 144/354 (40%)
Query: 40 RSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCN 99
R+L ++ TLS Q T + LDLS N + I G F L LE+L L
Sbjct: 252 RNLSLKSTEQVTLSNTTFQGLEK-TKITVLDLSENRISKIVDGAFQWLPQLEFLSLEHNT 310
Query: 100 LTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLV----LGNLGKLDTLDLRQSGISNLPD 155
+ +++ +F L +L+ L L + +KSH ++ +L +L+ L + + L +
Sbjct: 311 IRHLTNDSFSGLGNLRQLNLRKALIKSHASLPVIDDFSFQHLVQLEYLCMANTAFRELTE 370
Query: 156 NVFANNTWLRNLNLAENELIDLDVATTLGQNLVHL-DSLDLSNCHLKG----PLSEDAFV 210
+F+ LRNL + + T + L +S L +L G L AF
Sbjct: 371 QIFSG---LRNLKTLDLSWSITGIKTVTNKTFAGLKESPLLQTLNLTGMGINKLEPGAFS 427
Query: 211 NATKLRTLYLSGNPLSAADLSVALKPLTKLHRL--SLRNCGLSRLPANTFHRFTC-LQEL 267
+ L L +S N ++ K L+ + + S+ +S A+ H T + +L
Sbjct: 428 SFGNLSNLLMSRNFINQQLQGNEFKGLSNIKEIDMSINQQSISLTNASFVHVSTLRILKL 487
Query: 268 DISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETL-- 325
+ +D + PL +L LD+ +N+ I+ + +LK + + N L L
Sbjct: 488 GRALKGTLDMEPSPFRPLVNLTILDLSNNNIANINGDLLEGLYNLKVVKMQHNNLARLWK 547
Query: 326 ---ESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVL 376
G L + L N ++E + + +L EL L GN L L
Sbjct: 548 MANPGGPVLFLKDATNLSYLNLDYNGIDEIPPNAFRGFSELHELSLRGNLLDQL 601
Score = 153 (58.9 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 87/322 (27%), Positives = 132/322 (40%)
Query: 51 TLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDN 110
TLS ++ +TNL + D S N L IE + L L++L + IS N
Sbjct: 68 TLSSLH--MYTNLVNI---DASYNSLAGIEKDLCLSLPHLQFLNAQHNQVYLISEKDLKN 122
Query: 111 LNHLKTLELSQNKLKSHIDWTLVLGNLGKLDT----LDLRQSG----ISNLPDNVFANNT 162
HL L+LS NKLK + +L NL LD L + G + NL V + N
Sbjct: 123 CFHLTQLDLSDNKLKLQGEPFSLLKNLTWLDVSRNKLTSAKLGTEPQLPNLVTLVLSGN- 181
Query: 163 WLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSG 222
N+N+ + D + V L LS+ LK + F L L L
Sbjct: 182 ---NINILQKN--DFSFLSNSSSFRV----LILSSLILK-KVENGCFKAIDTLYDLVLDS 231
Query: 223 NPLSAADLSVALKPL--TKLHRLSLRNCGLSRLPANTFHRF--TCLQELDISHNPLIDAF 278
+ L++ + + L T L LSL++ L TF T + LD+S N +
Sbjct: 232 SKLTSQFTTSLFEELADTALRNLSLKSTEQVTLSNTTFQGLEKTKITVLDLSENRISKIV 291
Query: 279 TALLSPLESLEHLDMGYSNLQRISRSTF-----LKMTSL-KTLILSGNKLETLESGLFQN 332
L LE L + ++ ++ ++ +F L+ +L K LI S L ++ FQ+
Sbjct: 292 DGAFQWLPQLEFLSLEHNTIRHLTNDSFSGLGNLRQLNLRKALIKSHASLPVIDDFSFQH 351
Query: 333 LTHLSVLELNNCGLTRLNETVF 354
L L L + N L E +F
Sbjct: 352 LVQLEYLCMANTAFRELTEQIF 373
Score = 135 (52.6 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 94/380 (24%), Positives = 167/380 (43%)
Query: 3 QGHPVYN-DRRNLDNPGLIT-INLNANPIQPVEGAFLVARSLLYLYMQ--ECTLSKIN-- 56
Q + VY ++L N +T ++L+ N ++ F + ++L +L + + T +K+
Sbjct: 108 QHNQVYLISEKDLKNCFHLTQLDLSDNKLKLQGEPFSLLKNLTWLDVSRNKLTSAKLGTE 167
Query: 57 PQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLT---SLEYLMLNRCNLTYISPSAFDNLNH 113
PQ NL TL LSGN + I++ F L+ S L+L+ L + F ++
Sbjct: 168 PQL-PNLVTLV---LSGNNINILQKNDFSFLSNSSSFRVLILSSLILKKVENGCFKAIDT 223
Query: 114 LKTLELSQNKLKSHIDWTLV--LGNLGKLDTLDLRQSGISNLPDNVFAN--NTWLRNLNL 169
L L L +KL S +L L + L L L+ + L + F T + L+L
Sbjct: 224 LYDLVLDSSKLTSQFTTSLFEELADTA-LRNLSLKSTEQVTLSNTTFQGLEKTKITVLDL 282
Query: 170 AENELIDL-DVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPL-SA 227
+EN + + D A Q L L+ L L + ++ L+ D+F LR L L + S
Sbjct: 283 SENRISKIVDGAF---QWLPQLEFLSLEHNTIRH-LTNDSFSGLGNLRQLNLRKALIKSH 338
Query: 228 ADLSV----ALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPL-IDAFT--- 279
A L V + + L +L L + N L F L+ LD+S + I T
Sbjct: 339 ASLPVIDDFSFQHLVQLEYLCMANTAFRELTEQIFSGLRNLKTLDLSWSITGIKTVTNKT 398
Query: 280 -ALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKL-ETLESGLFQNLTHLS 337
A L L+ L++ + ++ F +L L++S N + + L+ F+ L+++
Sbjct: 399 FAGLKESPLLQTLNLTGMGINKLEPGAFSSFGNLSNLLMSRNFINQQLQGNEFKGLSNIK 458
Query: 338 VLEL--NNCGLTRLNETVFH 355
+++ N ++ N + H
Sbjct: 459 EIDMSINQQSISLTNASFVH 478
Score = 129 (50.5 bits), Expect = 0.00017, P = 0.00017
Identities = 70/276 (25%), Positives = 125/276 (45%)
Query: 113 HLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAEN 172
++ TL++S N+LK+ + + NL +D + ++ + ++ + L+ LN N
Sbjct: 55 NITTLDVSHNRLKT-LSSLHMYTNLVNIDA---SYNSLAGIEKDLCLSLPHLQFLNAQHN 110
Query: 173 ELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSV 232
++ + +N HL LDLS+ LK L + F L L +S N L++A L
Sbjct: 111 QVYLISEKDL--KNCFHLTQLDLSDNKLK--LQGEPFSLLKNLTWLDVSRNKLTSAKLGT 166
Query: 233 ALKPLTKLHRLSLRNCGLSRLPANTFH---RFTCLQELDISHNPLIDAFTALLSPLESLE 289
+ L L L L ++ L N F + + L +S L +++L
Sbjct: 167 EPQ-LPNLVTLVLSGNNINILQKNDFSFLSNSSSFRVLILSSLILKKVENGCFKAIDTLY 225
Query: 290 HLDMGYSNL-QRISRSTFLKM--TSLKTLILSGNKLETLESGLFQNL--THLSVLELNNC 344
L + S L + + S F ++ T+L+ L L + TL + FQ L T ++VL+L+
Sbjct: 226 DLVLDSSKLTSQFTTSLFEELADTALRNLSLKSTEQVTLSNTTFQGLEKTKITVLDLSEN 285
Query: 345 GLTRLNETVFHENYTYPDLEELRLSGNPL-HVLPDS 379
++++ + F P LE L L N + H+ DS
Sbjct: 286 RISKIVDGAFQ---WLPQLEFLSLEHNTIRHLTNDS 318
Score = 129 (50.5 bits), Expect = 0.00017, P = 0.00017
Identities = 103/458 (22%), Positives = 188/458 (41%)
Query: 52 LSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLT-YISPSAFDN 110
L K + F +N ++ L LS L+ +E G F + +L L+L+ LT + S F+
Sbjct: 186 LQKNDFSFLSNSSSFRVLILSSLILKKVENGCFKAIDTLYDLVLDSSKLTSQFTTSLFEE 245
Query: 111 L--NHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLN 168
L L+ L L + + + T K+ LDL ++ IS + D F L L+
Sbjct: 246 LADTALRNLSLKSTEQVTLSNTTFQGLEKTKITVLDLSENRISKIVDGAFQWLPQLEFLS 305
Query: 169 LAENELIDL--DVATTLGQNLVHLDSLD-LSNCHLKGPLSED-AFVNATKLRTLYLSGNP 224
L N + L D + LG NL L+ L H P+ +D +F + +L L ++
Sbjct: 306 LEHNTIRHLTNDSFSGLG-NLRQLNLRKALIKSHASLPVIDDFSFQHLVQLEYLCMANTA 364
Query: 225 LSAADLSV--ALKPLTKLHRLSLRNCGLSRLPANTF---HRFTCLQELDISHNPLIDAFT 279
+ L+ L L LS G+ + TF LQ L+++ +
Sbjct: 365 FRELTEQIFSGLRNLKTLD-LSWSITGIKTVTNKTFAGLKESPLLQTLNLTGMGINKLEP 423
Query: 280 ALLSPLESLEHLDMGYSNL-QRISRSTFLKMTSLKTLILSGNKLE-TLESGLFQNLTHLS 337
S +L +L M + + Q++ + F ++++K + +S N+ +L + F +++ L
Sbjct: 424 GAFSSFGNLSNLLMSRNFINQQLQGNEFKGLSNIKEIDMSINQQSISLTNASFVHVSTLR 483
Query: 338 VLELNNC--GLTRLNETVFHE--NYTYPDLEE---LRLSGNPLHVLPDSTKQYSMRTIPT 390
+L+L G + + F N T DL ++G+ L L +
Sbjct: 484 ILKLGRALKGTLDMEPSPFRPLVNLTILDLSNNNIANINGDLLEGLYNLKVVKMQHNNLA 543
Query: 391 QIWKNFD-FLVILFILNETVFHENYTYPDLEELRLSGNPLHVLPTGNXXXXXXXXXXXXX 449
++WK + +LF+ + T N +Y L L N + +P N
Sbjct: 544 RLWKMANPGGPVLFLKDAT----NLSY-----LNLDYNGIDEIPP-NAFRGFSELHELSL 593
Query: 450 XXXCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSF 487
+D L +VF++ ++ L+L N ++ +F
Sbjct: 594 RGNL-LDQLHASVFDDLNSLKYLHLQKNLITSVQRATF 630
>RGD|1593785 [details] [associations]
symbol:Lrrtm2 "leucine rich repeat transmembrane neuronal 2"
species:10116 "Rattus norvegicus" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0042043 "neurexin
family protein binding" evidence=IPI] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0050808 "synapse organization"
evidence=ISO;IDA] [GO:0060076 "excitatory synapse" evidence=IDA]
InterPro:IPR001611 PROSITE:PS51450 RGD:1593785 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 InterPro:IPR003591
SMART:SM00369 GO:GO:0050808 InterPro:IPR000372 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 GO:GO:0060076 EMBL:CH473974
CTD:26045 OrthoDB:EOG4PG60Z IPI:IPI00202163 RefSeq:NP_001102939.1
UniGene:Rn.218238 Ensembl:ENSRNOT00000026825 GeneID:685472
KEGG:rno:685472 UCSC:RGD:1593785 NextBio:729781 Uniprot:D4A7P2
Length = 515
Score = 196 (74.1 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 73/255 (28%), Positives = 118/255 (46%)
Query: 69 LDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHI 128
L L N + +E F + L +L L+ ++ + AF L LK L LS NK+
Sbjct: 66 LSLRHNHITALERDQFASFSQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLP 125
Query: 129 DWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLV 188
+ T L L LDL + +S+L +F L+ L+L N L + V L +
Sbjct: 126 NTTFT--QLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIPVR--LFWDCR 181
Query: 189 HLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNC 248
L+ LDLS L+ L+ + F KLR L+L N L+ + + L+ L+ LH L L+
Sbjct: 182 SLEFLDLSTNRLRS-LARNGFAGLIKLRELHLEHNQLTKINFAHFLR-LSSLHTLFLQWN 239
Query: 249 GLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLK 308
+S L ++ L++LD++ N + + + +L+ L M + L +
Sbjct: 240 KISNLTCGMEWTWSTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNNKLNSLDSKILSS 299
Query: 309 MTSLKTLILSGNKLE 323
+ SL T+ LSGN E
Sbjct: 300 LRSLTTVGLSGNLWE 314
Score = 195 (73.7 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
Identities = 79/256 (30%), Positives = 121/256 (47%)
Query: 135 GNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLD 194
G+LG L LR + I+ L + FA+ + L L+L N++ V Q L L L
Sbjct: 62 GSLG----LSLRHNHITALERDQFASFSQLTWLHLDHNQIST--VKEDAFQGLYKLKELI 115
Query: 195 LSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLP 254
LS+ + L F L+ L LS N LS+ + L KL L LR+ L +P
Sbjct: 116 LSSNKIFY-LPNTTFTQLINLQNLDLSFNQLSSLHPEL-FYGLRKLQTLHLRSNSLRTIP 173
Query: 255 ANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKT 314
F L+ LD+S N L + L L L + ++ L +I+ + FL+++SL T
Sbjct: 174 VRLFWDCRSLEFLDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLRLSSLHT 233
Query: 315 LILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLH 374
L L NK+ L G+ + L L+L + ++ TVF T P+L+ L + N L+
Sbjct: 234 LFLQWNKISNLTCGMEWTWSTLEKLDLTGNEIKAIDLTVFE---TMPNLKILLMDNNKLN 290
Query: 375 VLPDSTKQYSMRTIPT 390
L DS S+R++ T
Sbjct: 291 SL-DSKILSSLRSLTT 305
Score = 167 (63.8 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 68/250 (27%), Positives = 114/250 (45%)
Query: 93 LMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISN 152
L L ++T + F + + L L L N++ S + G L KL L L + I
Sbjct: 66 LSLRHNHITALERDQFASFSQLTWLHLDHNQI-STVKEDAFQG-LYKLKELILSSNKIFY 123
Query: 153 LPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNA 212
LP+ F L+NL+L+ N+L L G L L +L L + L+ + F +
Sbjct: 124 LPNTTFTQLINLQNLDLSFNQLSSLHPELFYG--LRKLQTLHLRSNSLR-TIPVRLFWDC 180
Query: 213 TKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHN 272
L L LS N L + + L KL L L + L+++ F R + L L + N
Sbjct: 181 RSLEFLDLSTNRLRSLARN-GFAGLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWN 239
Query: 273 PLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQN 332
+ + + +LE LD+ + ++ I + F M +LK L++ NKL +L+S + +
Sbjct: 240 KISNLTCGMEWTWSTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNNKLNSLDSKILSS 299
Query: 333 LTHLSVLELN 342
L L+ + L+
Sbjct: 300 LRSLTTVGLS 309
Score = 166 (63.5 bits), Expect = 4.7e-10, Sum P(2) = 4.7e-10
Identities = 67/244 (27%), Positives = 113/244 (46%)
Query: 60 FTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLEL 119
F + + L L L N + ++ F L L+ L+L+ + Y+ + F L +L+ L+L
Sbjct: 81 FASFSQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLPNTTFTQLINLQNLDL 140
Query: 120 SQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDV 179
S N+L S + L G L KL TL LR + + +P +F + L L+L+ N L L
Sbjct: 141 SFNQLSS-LHPELFYG-LRKLQTLHLRSNSLRTIPVRLFWDCRSLEFLDLSTNRLRSL-- 196
Query: 180 ATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALK-PLT 238
A L+ L L L + L ++ F+ + L TL+L N +S +L+ ++ +
Sbjct: 197 ARNGFAGLIKLRELHLEHNQLT-KINFAHFLRLSSLHTLFLQWNKIS--NLTCGMEWTWS 253
Query: 239 KLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNL 298
L +L L + + F L+ L + +N L + +LS L SL + + NL
Sbjct: 254 TLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNNKLNSLDSKILSSLRSLTTVGLS-GNL 312
Query: 299 QRIS 302
S
Sbjct: 313 WECS 316
Score = 152 (58.6 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 57/174 (32%), Positives = 85/174 (48%)
Query: 52 LSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNL 111
LS ++P+ F L L L L N LR I +F SLE+L L+ L ++ + F L
Sbjct: 145 LSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEFLDLSTNRLRSLARNGFAGL 204
Query: 112 NHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTW--LRNLNL 169
L+ L L N+L + I++ L L L TL L+ + ISNL + TW L L+L
Sbjct: 205 IKLRELHLEHNQL-TKINFAHFL-RLSSLHTLFLQWNKISNLTCGM--EWTWSTLEKLDL 260
Query: 170 AENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGN 223
NE+ +D+ T+ + + +L L + N L L + L T+ LSGN
Sbjct: 261 TGNEIKAIDL--TVFETMPNLKILLMDNNKLNS-LDSKILSSLRSLTTVGLSGN 311
Score = 133 (51.9 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 64/225 (28%), Positives = 99/225 (44%)
Query: 19 LITINLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLR 77
L ++L+ N I V E AF L L + + + FT L L LDLS N L
Sbjct: 87 LTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLPNTTFTQLINLQNLDLSFNQLS 146
Query: 78 IIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNL 137
+ P +F L L+ L L +L I F + L+ L+LS N+L+S + G L
Sbjct: 147 SLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEFLDLSTNRLRS-LARNGFAG-L 204
Query: 138 GKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVH--LDSLDL 195
KL L L + ++ + F + L L L N++ +L T G L+ LDL
Sbjct: 205 IKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNKISNL----TCGMEWTWSTLEKLDL 260
Query: 196 SNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSV--ALKPLT 238
+ +K + F L+ L + N L++ D + +L+ LT
Sbjct: 261 TGNEIKA-IDLTVFETMPNLKILLMDNNKLNSLDSKILSSLRSLT 304
Score = 126 (49.4 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 69/273 (25%), Positives = 115/273 (42%)
Query: 211 NATKLRTLYLS--GNPLSAA--DLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQE 266
NAT +L LS N ++A D + LT LH L + +S + + F L+E
Sbjct: 57 NATDKGSLGLSLRHNHITALERDQFASFSQLTWLH---LDHNQISTVKEDAFQGLYKLKE 113
Query: 267 LDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLE 326
L +S N + + L +L++LD+ ++ L + F + L+TL L N L T+
Sbjct: 114 LILSSNKIFYLPNTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIP 173
Query: 327 SGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDS--TKQYS 384
LF + L L+L+ L L F L EL L N L + + + S
Sbjct: 174 VRLFWDCRSLEFLDLSTNRLRSLARNGFAGLIK---LRELHLEHNQLTKINFAHFLRLSS 230
Query: 385 MRTIPTQIWKNFDFLVILFILNETVFHENYTYPDLEELRLSGNPLHVLPTGNXXXXXXXX 444
+ T+ Q W I N T E +T+ LE+L L+GN + +
Sbjct: 231 LHTLFLQ-WNK--------ISNLTCGME-WTWSTLEKLDLTGNEIKAIDL--TVFETMPN 278
Query: 445 XXXXXXXXCKIDYLPPNVFNNTRNITSLNLANN 477
K++ L + ++ R++T++ L+ N
Sbjct: 279 LKILLMDNNKLNSLDSKILSSLRSLTTVGLSGN 311
Score = 57 (25.1 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 9/30 (30%), Positives = 17/30 (56%)
Query: 513 VLRHNRAITSIKLVGNPWKCDCNIADMWEW 542
+L R++T++ L GN W+C + + W
Sbjct: 296 ILSSLRSLTTVGLSGNLWECSPRVCALASW 325
>UNIPROTKB|A6H701 [details] [associations]
symbol:LRRTM2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050808 "synapse organization" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 GeneTree:ENSGT00700000104056
HOGENOM:HOG000290681 HOVERGEN:HBG052362 CTD:26045 OMA:IRQCSMI
OrthoDB:EOG4PG60Z EMBL:DAAA02020406 EMBL:BC146061 IPI:IPI00709063
RefSeq:NP_001092847.1 UniGene:Bt.55901 Ensembl:ENSBTAT00000018866
GeneID:520949 KEGG:bta:520949 InParanoid:A6H701 NextBio:20873206
Uniprot:A6H701
Length = 516
Score = 194 (73.4 bits), Expect = 2.4e-13, Sum P(2) = 2.4e-13
Identities = 79/256 (30%), Positives = 120/256 (46%)
Query: 135 GNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLD 194
G+LG L LR + I+ L + FA+ + L L+L N++ V Q L L L
Sbjct: 62 GSLG----LSLRHNHITELERDQFASFSQLTWLHLDHNQIST--VKEDAFQGLYKLKELI 115
Query: 195 LSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLP 254
LS+ + L F L+ L LS N LS+ + L KL L LR+ L +P
Sbjct: 116 LSSNKIFY-LPNTTFTQLINLQNLDLSFNQLSSLHPEL-FYGLRKLQTLHLRSNSLRTIP 173
Query: 255 ANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKT 314
F L+ LD+S N L + L L L + ++ L +I+ + FL+++SL T
Sbjct: 174 VRLFWDCRSLEFLDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLRLSSLHT 233
Query: 315 LILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLH 374
L L NK+ L G+ L L+L + ++ TVF T P+L+ L + N L+
Sbjct: 234 LFLQWNKISNLTCGMEWTWGTLEKLDLTGNEIKAIDLTVFE---TMPNLKILLMDNNKLN 290
Query: 375 VLPDSTKQYSMRTIPT 390
L DS S+R++ T
Sbjct: 291 SL-DSKILNSLRSLTT 305
Score = 190 (71.9 bits), Expect = 6.7e-13, Sum P(2) = 6.7e-13
Identities = 73/255 (28%), Positives = 117/255 (45%)
Query: 69 LDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHI 128
L L N + +E F + L +L L+ ++ + AF L LK L LS NK+
Sbjct: 66 LSLRHNHITELERDQFASFSQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLP 125
Query: 129 DWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLV 188
+ T L L LDL + +S+L +F L+ L+L N L + V L +
Sbjct: 126 NTTFT--QLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIPVR--LFWDCR 181
Query: 189 HLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNC 248
L+ LDLS L+ L+ + F KLR L+L N L+ + + L+ L+ LH L L+
Sbjct: 182 SLEFLDLSTNRLRS-LARNGFAGLIKLRELHLEHNQLTKINFAHFLR-LSSLHTLFLQWN 239
Query: 249 GLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLK 308
+S L + L++LD++ N + + + +L+ L M + L +
Sbjct: 240 KISNLTCGMEWTWGTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNNKLNSLDSKILNS 299
Query: 309 MTSLKTLILSGNKLE 323
+ SL T+ LSGN E
Sbjct: 300 LRSLTTVGLSGNLWE 314
Score = 165 (63.1 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 68/250 (27%), Positives = 114/250 (45%)
Query: 93 LMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISN 152
L L ++T + F + + L L L N++ S + G L KL L L + I
Sbjct: 66 LSLRHNHITELERDQFASFSQLTWLHLDHNQI-STVKEDAFQG-LYKLKELILSSNKIFY 123
Query: 153 LPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNA 212
LP+ F L+NL+L+ N+L L G L L +L L + L+ + F +
Sbjct: 124 LPNTTFTQLINLQNLDLSFNQLSSLHPELFYG--LRKLQTLHLRSNSLR-TIPVRLFWDC 180
Query: 213 TKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHN 272
L L LS N L + + L KL L L + L+++ F R + L L + N
Sbjct: 181 RSLEFLDLSTNRLRSLARN-GFAGLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWN 239
Query: 273 PLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQN 332
+ + + +LE LD+ + ++ I + F M +LK L++ NKL +L+S + +
Sbjct: 240 KISNLTCGMEWTWGTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNNKLNSLDSKILNS 299
Query: 333 LTHLSVLELN 342
L L+ + L+
Sbjct: 300 LRSLTTVGLS 309
Score = 162 (62.1 bits), Expect = 8.2e-10, Sum P(2) = 8.2e-10
Identities = 68/261 (26%), Positives = 120/261 (45%)
Query: 43 LYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTY 102
L L ++ ++++ F + + L L L N + ++ F L L+ L+L+ + Y
Sbjct: 64 LGLSLRHNHITELERDQFASFSQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFY 123
Query: 103 ISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNT 162
+ + F L +L+ L+LS N+L S + L G L KL TL LR + + +P +F +
Sbjct: 124 LPNTTFTQLINLQNLDLSFNQLSS-LHPELFYG-LRKLQTLHLRSNSLRTIPVRLFWDCR 181
Query: 163 WLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSG 222
L L+L+ N L L A L+ L L L + L ++ F+ + L TL+L
Sbjct: 182 SLEFLDLSTNRLRSL--ARNGFAGLIKLRELHLEHNQLT-KINFAHFLRLSSLHTLFLQW 238
Query: 223 NPLSAADLSVALK-PLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTAL 281
N +S +L+ ++ L +L L + + F L+ L + +N L + +
Sbjct: 239 NKIS--NLTCGMEWTWGTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNNKLNSLDSKI 296
Query: 282 LSPLESLEHLDMGYSNLQRIS 302
L+ L SL + + NL S
Sbjct: 297 LNSLRSLTTVGLS-GNLWECS 316
Score = 133 (51.9 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 64/225 (28%), Positives = 99/225 (44%)
Query: 19 LITINLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLR 77
L ++L+ N I V E AF L L + + + FT L L LDLS N L
Sbjct: 87 LTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLPNTTFTQLINLQNLDLSFNQLS 146
Query: 78 IIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNL 137
+ P +F L L+ L L +L I F + L+ L+LS N+L+S + G L
Sbjct: 147 SLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEFLDLSTNRLRS-LARNGFAG-L 204
Query: 138 GKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVH--LDSLDL 195
KL L L + ++ + F + L L L N++ +L T G L+ LDL
Sbjct: 205 IKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNKISNL----TCGMEWTWGTLEKLDL 260
Query: 196 SNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSV--ALKPLT 238
+ +K + F L+ L + N L++ D + +L+ LT
Sbjct: 261 TGNEIKA-IDLTVFETMPNLKILLMDNNKLNSLDSKILNSLRSLT 304
Score = 128 (50.1 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 58/248 (23%), Positives = 105/248 (42%)
Query: 243 LSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRIS 302
LSLR+ ++ L + F F+ L L + HN + L L+ L + + + +
Sbjct: 66 LSLRHNHITELERDQFASFSQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLP 125
Query: 303 RSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHE--NYTY 360
+TF ++ +L+ L LS N+L +L LF L L L L + L + +F + + +
Sbjct: 126 NTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEF 185
Query: 361 PDLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWK-NF-DFLVI-----LFI----LNETV 409
DL RL + K + Q+ K NF FL + LF+ ++
Sbjct: 186 LDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNKISNLT 245
Query: 410 FHENYTYPDLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNI 469
+T+ LE+L L+GN + + K++ L + N+ R++
Sbjct: 246 CGMEWTWGTLEKLDLTGNEIKAIDL--TVFETMPNLKILLMDNNKLNSLDSKILNSLRSL 303
Query: 470 TSLNLANN 477
T++ L+ N
Sbjct: 304 TTVGLSGN 311
Score = 59 (25.8 bits), Expect = 2.4e-13, Sum P(2) = 2.4e-13
Identities = 10/30 (33%), Positives = 17/30 (56%)
Query: 513 VLRHNRAITSIKLVGNPWKCDCNIADMWEW 542
+L R++T++ L GN W+C I + W
Sbjct: 296 ILNSLRSLTTVGLSGNLWECSPRICALASW 325
>WB|WBGene00010621 [details] [associations]
symbol:egg-6 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040015 "negative regulation of multicellular organism growth"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0048477
"oogenesis" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
InterPro:IPR001611 InterPro:IPR027202 PROSITE:PS51450 GO:GO:0009792
GO:GO:0040010 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
GO:GO:0040011 GO:GO:0048477 GO:GO:0040015 EMBL:Z81098
GeneTree:ENSGT00700000104286 PANTHER:PTHR24371:SF0 HSSP:P12830
EMBL:JQ292908 PIR:T23395 RefSeq:NP_492348.1
ProteinModelPortal:P90920 SMR:P90920 DIP:DIP-24762N
MINT:MINT-1081293 STRING:P90920 EnsemblMetazoa:K07A12.2
GeneID:172670 KEGG:cel:CELE_K07A12.2 UCSC:K07A12.2 CTD:172670
WormBase:K07A12.2 HOGENOM:HOG000020436 InParanoid:P90920
OMA:INNFELM NextBio:876503 Uniprot:P90920
Length = 961
Score = 220 (82.5 bits), Expect = 2.5e-13, Sum P(2) = 2.5e-13
Identities = 94/374 (25%), Positives = 166/374 (44%)
Query: 20 ITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRII 79
ITIN N PV G +L+ + + +S I + F L+ L +L L N +
Sbjct: 109 ITINGNELKTVPVFGNL---STLMSMNLNSNQISSIPDKAFNGLSALTQLRLENNAICDF 165
Query: 80 EPGVFDPL-TSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLG 138
P D + SL L ++ L I N +L L+L N + S I+ L NL
Sbjct: 166 PPKSLDAVKASLVLLDVSGNCLDAIPAQILRNAANLMYLDLGSNNI-SEIN-NFELMNLP 223
Query: 139 KLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNC 198
L L ++ + + + F N L+ L L +N + LD L Q +L+ LD+SN
Sbjct: 224 FLRELRVQNNTLRRIHPMAFMNVPQLQYLYLQDNIISTLD-GNRL-QGFKNLEVLDVSNN 281
Query: 199 HLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTF 258
L S N ++R + GN ++ + ++A L +S++N + ++ N+F
Sbjct: 282 ALYALPSLKDLPNLKQVR---VDGNLITKIE-TLAFSNNPNLQLISVQNNNIVQISRNSF 337
Query: 259 HRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILS 318
L L + +N L + +++L+ L + + L + S+F ++ L TL L
Sbjct: 338 ESLDKLVVLLVGNNSLAKIERGMFDGMKNLQQLSIRNNTLTALDASSFAQLAHLTTLDLG 397
Query: 319 GNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPD 378
NK+ +E G F L+ L L+L+N ++ +VF + + + L GN L + +
Sbjct: 398 HNKIHDIEEGTFDKLSKLFWLDLSNNKISGFKTSVFKKK-----ISNILLDGNQL-ICDE 451
Query: 379 STKQYSMRTIPTQI 392
S ++ I ++
Sbjct: 452 SFNEFLTYLIANKV 465
Score = 204 (76.9 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 91/345 (26%), Positives = 155/345 (44%)
Query: 19 LITINLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNL-TTLNKLDLSGNPL 76
L+++NLN+N I + + AF +L L ++ + P+ + +L LD+SGN L
Sbjct: 128 LMSMNLNSNQISSIPDKAFNGLSALTQLRLENNAICDFPPKSLDAVKASLVLLDVSGNCL 187
Query: 77 RIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKS-HIDWTLVLG 135
I + +L YL L N++ I+ NL L+ L + N L+ H +
Sbjct: 188 DAIPAQILRNAANLMYLDLGSNNISEINNFELMNLPFLRELRVQNNTLRRIH---PMAFM 244
Query: 136 NLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDL 195
N+ +L L L+ + IS L N L L+++ N L L L NL + +D
Sbjct: 245 NVPQLQYLYLQDNIISTLDGNRLQGFKNLEVLDVSNNALYALPSLKDL-PNLKQV-RVD- 301
Query: 196 SNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPA 255
N K + AF N L+ + + N + + + + L KL L + N L+++
Sbjct: 302 GNLITK--IETLAFSNNPNLQLISVQNNNIVQISRN-SFESLDKLVVLLVGNNSLAKIER 358
Query: 256 NTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTL 315
F LQ+L I +N L + + L L LD+G++ + I TF K++ L L
Sbjct: 359 GMFDGMKNLQQLSIRNNTLTALDASSFAQLAHLTTLDLGHNKIHDIEEGTFDKLSKLFWL 418
Query: 316 ILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTY 360
LS NK+ ++ +F+ +L+ N + + F+E TY
Sbjct: 419 DLSNNKISGFKTSVFKKKISNILLDGNQL----ICDESFNEFLTY 459
Score = 150 (57.9 bits), Expect = 8.3e-06, Sum P(2) = 8.3e-06
Identities = 97/396 (24%), Positives = 165/396 (41%)
Query: 110 NLNHLKTLELSQNKLKSHIDWTLVL-GNLGKLDTLD---LRQSGISNLPDNVFANNTW-- 163
N +KT+ +Q S ID +L G K+++L LR I N F+ W
Sbjct: 44 NGEDVKTI--AQTVGTSQIDELHILNGTDVKIESLPFNGLRTIAILNSTLQSFSPTAWRH 101
Query: 164 ----LRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLY 219
+ ++ + NEL + V G NL L S++L++ + + + AF + L L
Sbjct: 102 VEATIEHITINGNELKTVPV---FG-NLSTLMSMNLNSNQISS-IPDKAFNGLSALTQLR 156
Query: 220 LSGNPL-SAADLSV-ALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDA 277
L N + S+ A+K L +S NC L +PA L LD+ N + +
Sbjct: 157 LENNAICDFPPKSLDAVKASLVLLDVS-GNC-LDAIPAQILRNAANLMYLDLGSNNISEI 214
Query: 278 FTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLS 337
L L L L + + L+RI F+ + L+ L L N + TL+ Q +L
Sbjct: 215 NNFELMNLPFLRELRVQNNTLRRIHPMAFMNVPQLQYLYLQDNIISTLDGNRLQGFKNLE 274
Query: 338 VLELNNCGLTRL-------N-ETVFHENYTYPDLEELRLSGNP-LHVLPDSTKQYSMRTI 388
VL+++N L L N + V + +E L S NP L ++ S + ++ I
Sbjct: 275 VLDVSNNALYALPSLKDLPNLKQVRVDGNLITKIETLAFSNNPNLQLI--SVQNNNIVQI 332
Query: 389 PTQIWKNFDFLVILFILNETVFH-ENYTYP---DLEELRLSGNPLHVLPTGNXXXXXXXX 444
+++ D LV+L + N ++ E + +L++L + N L L +
Sbjct: 333 SRNSFESLDKLVVLLVGNNSLAKIERGMFDGMKNLQQLSIRNNTLTALDASSFAQLAHLT 392
Query: 445 XXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNLS 480
KI + F+ + L+L+NN +S
Sbjct: 393 TLDLGHN--KIHDIEEGTFDKLSKLFWLDLSNNKIS 426
Score = 148 (57.2 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 66/281 (23%), Positives = 119/281 (42%)
Query: 209 FVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTC-LQEL 267
F N + L ++ L+ N +S+ A L+ L +L L N + P + L L
Sbjct: 122 FGNLSTLMSMNLNSNQISSIP-DKAFNGLSALTQLRLENNAICDFPPKSLDAVKASLVLL 180
Query: 268 DISHNPLIDAFTA-LLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLE 326
D+S N L DA A +L +L +LD+G +N+ I+ + + L+ L + N L +
Sbjct: 181 DVSGNCL-DAIPAQILRNAANLMYLDLGSNNISEINNFELMNLPFLRELRVQNNTLRRIH 239
Query: 327 SGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQYSMR 386
F N+ L L L + ++ L+ + +LE L +S N L+ LP S++
Sbjct: 240 PMAFMNVPQLQYLYLQDNIISTLDGNRLQG---FKNLEVLDVSNNALYALP------SLK 290
Query: 387 TIPTQIWKNFDFLVILFILNETVFHENYTYPDLEELRLSGNPLHVLPTGNXXXXXXXXXX 446
+P D +I I ET+ N P+L+ + + N +++
Sbjct: 291 DLPNLKQVRVDGNLITKI--ETLAFSNN--PNLQLISVQNN--NIVQISRNSFESLDKLV 344
Query: 447 XXXXXXCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSF 487
+ + +F+ +N+ L++ NN L+ SF
Sbjct: 345 VLLVGNNSLAKIERGMFDGMKNLQQLSIRNNTLTALDASSF 385
Score = 40 (19.1 bits), Expect = 2.5e-13, Sum P(2) = 2.5e-13
Identities = 12/43 (27%), Positives = 23/43 (53%)
Query: 650 LISVGVIILSAMVYFSFYARHLYRTKQQRIRRNTF--KSPCAS 690
L VG + + +++F Y + KQ+R+R++ SP +S
Sbjct: 861 LAFVGAVTVVVIIFFVNYTK-----KQRRLRKSLVYRSSPSSS 898
>UNIPROTKB|F1S7K2 [details] [associations]
symbol:LRG1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050873 "brown fat cell differentiation" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005615 OMA:RCAGPEA
GO:GO:0050873 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GeneTree:ENSGT00690000102197 EMBL:CU972396
ProteinModelPortal:F1S7K2 Ensembl:ENSSSCT00000014761 Uniprot:F1S7K2
Length = 347
Score = 185 (70.2 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 70/214 (32%), Positives = 98/214 (45%)
Query: 141 DTLDLRQS--GISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNC 198
DT+ L ++ +P ++ L+ L+L+ N+L DL L + L LDL+
Sbjct: 69 DTIYLATEFFNLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLP--VPQLKVLDLTRN 126
Query: 199 HLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTF 258
LK L F + L TL L N L D S L+ L L L L L LP
Sbjct: 127 ALKR-LPPGLFKVSAALHTLVLKENRLDILDASW-LRGLKALRHLDLSGNQLRTLPRKLL 184
Query: 259 HRFTCLQELDISHNPLIDAFTALL-SPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLIL 317
FT L LD+ +N L LL PL+ LE L + + LQ + L+ L L
Sbjct: 185 ANFTDLHILDLGNNQLQTLPPDLLRGPLK-LEWLHLEGNRLQVLEEGFLAPQPKLRYLFL 243
Query: 318 SGNKLETLESGLFQNLTHLSVLELNNCGLTRLNE 351
+ NKL TL +G F+ L L +L+L+N LT + E
Sbjct: 244 NNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPE 277
Score = 160 (61.4 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 70/232 (30%), Positives = 97/232 (41%)
Query: 148 SGISNLPDNVFANNTWLRNLNLAENELIDL-DVATTLGQNLVHLDSLDLSNCHLKGPLSE 206
S IS P F + + LA E +L + + Q + +L L LSN L+ LS
Sbjct: 52 SSISCQPPAKFPHYLPADTIYLA-TEFFNLTQMPADILQGIPNLQELHLSNNQLED-LSA 109
Query: 207 DAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQE 266
+ +L+ L L+ N L + K LH L L+ L L A+ L+
Sbjct: 110 KFLLPVPQLKVLDLTRNALKRLPPGL-FKVSAALHTLVLKENRLDILDASWLRGLKALRH 168
Query: 267 LDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLE 326
LD+S N L LL+ L LD+G + LQ + L+ L L GN+L+ LE
Sbjct: 169 LDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLE 228
Query: 327 SGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPD 378
G L L LNN LT L F L+ L LS N L +P+
Sbjct: 229 EGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQV---LDMLDLSNNSLTSVPE 277
Score = 153 (58.9 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 63/212 (29%), Positives = 93/212 (43%)
Query: 43 LYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTY 102
+YL + L+++ + L +L LS N L + P+ L+ L L R L
Sbjct: 71 IYLATEFFNLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKR 130
Query: 103 ISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNT 162
+ P F L TL L +N+L +D + + G L L LDL + + LP + AN T
Sbjct: 131 LPPGLFKVSAALHTLVLKENRLDI-LDASWLRG-LKALRHLDLSGNQLRTLPRKLLANFT 188
Query: 163 WLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSG 222
L L+L N+L L G + L+ L L L+ L E KLR L+L+
Sbjct: 189 DLHILDLGNNQLQTLPPDLLRGP--LKLEWLHLEGNRLQ-VLEEGFLAPQPKLRYLFLNN 245
Query: 223 NPLSAADLSVALKPLTKLHRLSLRNCGLSRLP 254
N L+ A + L L L L N L+ +P
Sbjct: 246 NKLTTLAAG-AFRGLQVLDMLDLSNNSLTSVP 276
Score = 133 (51.9 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 59/205 (28%), Positives = 91/205 (44%)
Query: 23 NLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPG 82
NL P ++G +L L++ L ++ +F + L LDL+ N L+ + PG
Sbjct: 79 NLTQMPADILQGI----PNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPG 134
Query: 83 VFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDT 142
+F +L L+L L + S L L+ L+LS N+L++ + L L N L
Sbjct: 135 LFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRT-LPRKL-LANFTDLHI 192
Query: 143 LDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKG 202
LDL + + LP ++ L L+L N L L+ Q L L L+N L
Sbjct: 193 LDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQP--KLRYLFLNNNKLT- 249
Query: 203 PLSEDAFVNATKLRTLYLSGNPLSA 227
L+ AF L L LS N L++
Sbjct: 250 TLAAGAFRGLQVLDMLDLSNNSLTS 274
Score = 114 (45.2 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 32/106 (30%), Positives = 49/106 (46%)
Query: 22 INLNANPIQPVEGAFLVARSLLYLY-MQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIE 80
++L+ N ++ + L + L++ + L + P L L L GN L+++E
Sbjct: 169 LDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLE 228
Query: 81 PGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKS 126
G P L YL LN LT ++ AF L L L+LS N L S
Sbjct: 229 EGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTS 274
Score = 111 (44.1 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 58/208 (27%), Positives = 86/208 (41%)
Query: 281 LLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLE 340
+L + +L+ L + + L+ +S L + LK L L+ N L+ L GLF+ L L
Sbjct: 87 ILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLV 146
Query: 341 LNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLV 400
L L L+ + L L LSGN L RT+P ++ NF L
Sbjct: 147 LKENRLDILDASWLRG---LKALRHLDLSGNQL------------RTLPRKLLANFTDLH 191
Query: 401 ILFILN---ETVFHENYTYP-DLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKID 456
IL + N +T+ + P LE L L GN L VL G K+
Sbjct: 192 ILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNN--KLT 249
Query: 457 YLPPNVFNNTRNITSLNLANNNLSMTSE 484
L F + + L+L+NN+L+ E
Sbjct: 250 TLAAGAFRGLQVLDMLDLSNNSLTSVPE 277
Score = 110 (43.8 bits), Expect = 8.5e-05, Sum P(2) = 8.5e-05
Identities = 63/253 (24%), Positives = 101/253 (39%)
Query: 85 DPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQ---NKLKSHIDWTLVLGNLGKLD 141
DP L + N +++ P+ F + T+ L+ N + D +L + L
Sbjct: 39 DPNACLVFHSSNGSSISCQPPAKFPHYLPADTIYLATEFFNLTQMPAD---ILQGIPNLQ 95
Query: 142 TLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLK 201
L L + + +L L+ L+L N L L +H +L L L
Sbjct: 96 ELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALH--TLVLKENRLD 153
Query: 202 GPLSEDAFVNATK-LRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHR 260
+ + +++ K LR L LSGN L + L T LH L L N L LP +
Sbjct: 154 --ILDASWLRGLKALRHLDLSGNQLRTLPRKL-LANFTDLHILDLGNNQLQTLPPDLLRG 210
Query: 261 FTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGN 320
L+ L + N L L+P L +L + + L ++ F + L L LS N
Sbjct: 211 PLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNN 270
Query: 321 KLETLESGLFQNL 333
L ++ GL+ +L
Sbjct: 271 SLTSVPEGLWASL 283
Score = 60 (26.2 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 527 GNPWKCDCNIADMWEW 542
GNPW CD + D++ W
Sbjct: 298 GNPWICDQKLDDLYRW 313
>UNIPROTKB|O94813 [details] [associations]
symbol:SLIT2 "Slit homolog 2 protein" species:9606 "Homo
sapiens" [GO:0001656 "metanephros development" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0010629 "negative regulation of gene expression"
evidence=IEA] [GO:0016337 "cell-cell adhesion" evidence=IEA]
[GO:0033563 "dorsal/ventral axon guidance" evidence=IEA]
[GO:0045499 "chemorepellent activity" evidence=IEA] [GO:0060763
"mammary duct terminal end bud growth" evidence=IEA] [GO:0001657
"ureteric bud development" evidence=IMP] [GO:0050929 "induction of
negative chemotaxis" evidence=IDA] [GO:0050772 "positive regulation
of axonogenesis" evidence=TAS] [GO:0005615 "extracellular space"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0031290
"retinal ganglion cell axon guidance" evidence=IDA] [GO:0009986
"cell surface" evidence=IDA] [GO:0048495 "Roundabout binding"
evidence=IPI] [GO:0043237 "laminin-1 binding" evidence=IDA]
[GO:0042803 "protein homodimerization activity" evidence=IDA]
[GO:0050919 "negative chemotaxis" evidence=IDA;IMP] [GO:0030336
"negative regulation of cell migration" evidence=IMP;IDA]
[GO:0048754 "branching morphogenesis of an epithelial tube"
evidence=IDA;IMP] [GO:0010593 "negative regulation of lamellipodium
assembly" evidence=IDA] [GO:0005095 "GTPase inhibitor activity"
evidence=IDA] [GO:0051058 "negative regulation of small GTPase
mediated signal transduction" evidence=IDA] [GO:0016020 "membrane"
evidence=NAS] [GO:0010596 "negative regulation of endothelial cell
migration" evidence=IDA] [GO:0043116 "negative regulation of
vascular permeability" evidence=IDA] [GO:0005509 "calcium ion
binding" evidence=NAS] [GO:0090024 "negative regulation of
neutrophil chemotaxis" evidence=IDA] [GO:0030837 "negative
regulation of actin filament polymerization" evidence=IDA]
[GO:0001933 "negative regulation of protein phosphorylation"
evidence=IDA] [GO:0002689 "negative regulation of leukocyte
chemotaxis" evidence=IDA] [GO:0043394 "proteoglycan binding"
evidence=IPI] [GO:0048846 "axon extension involved in axon
guidance" evidence=IDA] [GO:0071504 "cellular response to heparin"
evidence=IDA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IMP] [GO:0090260 "negative regulation of retinal
ganglion cell axon guidance" evidence=IDA] [GO:0061364 "apoptotic
process involved in luteolysis" evidence=IEP] [GO:0032870 "cellular
response to hormone stimulus" evidence=IEP] [GO:0051414 "response
to cortisol stimulus" evidence=IEP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008045 "motor neuron axon guidance"
evidence=IDA] [GO:0021836 "chemorepulsion involved in postnatal
olfactory bulb interneuron migration" evidence=IDA] [GO:0008201
"heparin binding" evidence=IDA] [GO:0007411 "axon guidance"
evidence=IDA;TAS] [GO:0021834 "chemorepulsion involved in embryonic
olfactory bulb interneuron precursor migration" evidence=IDA]
[GO:0005576 "extracellular region" evidence=TAS] [GO:0005886
"plasma membrane" evidence=TAS] [GO:0035385 "Roundabout signaling
pathway" evidence=IC;IMP] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IMP] [GO:0030308
"negative regulation of cell growth" evidence=IMP] [GO:0090027
"negative regulation of monocyte chemotaxis" evidence=ISS]
[GO:0014912 "negative regulation of smooth muscle cell migration"
evidence=IDA] [GO:0002042 "cell migration involved in sprouting
angiogenesis" evidence=IMP] [GO:0071672 "negative regulation of
smooth muscle cell chemotaxis" evidence=IDA] [GO:0071676 "negative
regulation of mononuclear cell migration" evidence=IDA] [GO:0090288
"negative regulation of cellular response to growth factor
stimulus" evidence=IDA] [GO:0021972 "corticospinal neuron axon
guidance through spinal cord" evidence=IMP] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005886 GO:GO:0005737 Reactome:REACT_111045 GO:GO:0008285
GO:GO:0005615 GO:GO:0042803 GO:GO:0009986 GO:GO:0030308
GO:GO:0001701 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0008201
Pathway_Interaction_DB:glypican_1pathway GO:GO:0005509
GO:GO:0043116 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0043065 GO:GO:0008045 GO:GO:0071504
GO:GO:0050772 GO:GO:0005095 Reactome:REACT_96538 GO:GO:0016337
PROSITE:PS01186 GO:GO:0032870 GO:GO:0030837 GO:GO:0010629
InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 GO:GO:0071672 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 EMBL:CH471069 GO:GO:0001656
GO:GO:0010596 GO:GO:0001657 GO:GO:0001933 GO:GO:0048754
GO:GO:0071676 GO:GO:0031290 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
GO:GO:0060763 GO:GO:0070100 GO:GO:0090288 GO:GO:0043237
GO:GO:0033563 GO:GO:0045499 GO:GO:0002042 Pfam:PF01463
GO:GO:0090027 GO:GO:0010593 GO:GO:0051414 GO:GO:0090260 PDB:2V9T
PDBsum:2V9T GO:GO:0021836 GO:GO:0035385 GO:GO:0061364
HOGENOM:HOG000116120 HOVERGEN:HBG057959 EMBL:AB017168 EMBL:AF055585
EMBL:AF133270 EMBL:BC117190 EMBL:BC143978 IPI:IPI00006288
IPI:IPI00220114 IPI:IPI00335003 RefSeq:NP_004778.1 UniGene:Hs.29802
PDB:2V70 PDB:2V9S PDB:2WFH PDBsum:2V70 PDBsum:2V9S PDBsum:2WFH
ProteinModelPortal:O94813 SMR:O94813 DIP:DIP-38198N IntAct:O94813
MINT:MINT-6768470 STRING:O94813 PhosphoSite:O94813 PaxDb:O94813
PRIDE:O94813 Ensembl:ENST00000503823 Ensembl:ENST00000503837
Ensembl:ENST00000504154 GeneID:9353 KEGG:hsa:9353 UCSC:uc003gpr.1
UCSC:uc003gps.1 CTD:9353 GeneCards:GC04P020254 HGNC:HGNC:11086
HPA:CAB007590 HPA:HPA019511 HPA:HPA023088 MIM:603746
neXtProt:NX_O94813 PharmGKB:PA35939 InParanoid:O94813 KO:K06839
PhylomeDB:O94813 EvolutionaryTrace:O94813 GenomeRNAi:9353
NextBio:35025 ArrayExpress:O94813 Bgee:O94813 CleanEx:HS_SLIT2
Genevestigator:O94813 GermOnline:ENSG00000145147 GO:GO:0021972
GO:GO:0050929 GO:GO:0090024 GO:GO:0051058 Uniprot:O94813
Length = 1529
Score = 199 (75.1 bits), Expect = 8.0e-13, Sum P(2) = 8.0e-13
Identities = 81/340 (23%), Positives = 149/340 (43%)
Query: 17 PGLIT-INLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGN 74
P IT I L N I+ + GAF + L + + +S++ P F L +LN L L GN
Sbjct: 299 PETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 358
Query: 75 PLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVL 134
+ + +F+ L SL+ L+LN + + AF +L++L L L NKL++ T
Sbjct: 359 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTF-- 416
Query: 135 GNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLD 194
L + T+ L Q+ P + WL + L N + T + L +
Sbjct: 417 SPLRAIQTMHLAQN-----PFICDCHLKWLADY-LHTNPIETSGARCTSPRRLANKRIGQ 470
Query: 195 LSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLP 254
+ + + E F+ T+ LSG+ ADL+ K + + N L+++P
Sbjct: 471 IKSKKFRCSAKEQYFIPGTEDYRSKLSGDCF--ADLACPEKCRCEGTTVDCSNQKLNKIP 528
Query: 255 ANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKT 314
+ ++T L+ + +++A T + L L ++ + + I F + +
Sbjct: 529 EH-IPQYTAELRLNNNEFTVLEA-TGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNE 586
Query: 315 LILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVF 354
++L+ N+LE ++ +F+ L L L L + +T + F
Sbjct: 587 ILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSF 626
Score = 188 (71.2 bits), Expect = 2.7e-13, Sum P(2) = 2.7e-13
Identities = 98/379 (25%), Positives = 152/379 (40%)
Query: 22 INLNANPIQPVEGA-FLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIE 80
++LN N I + F R L L + E +S I F +L L +L L+ N L++
Sbjct: 60 LDLNGNNITRITKTDFAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNHLQLFP 119
Query: 81 PGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKL 140
+F L L L+ + I AF +K L+L N++ D L L
Sbjct: 120 ELLFLGTAKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRA--LRDL 177
Query: 141 DTLDLRQSGISNLPDNVFANNTWLRNLNLAENELI-DLDVATT---LGQN-LVHLDSLDL 195
+ L L + I+ L F + LR L N L D +A L Q V L + +
Sbjct: 178 EVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCM 237
Query: 196 SNCHLKGPLSEDAFVNATKLRTLYLSGNP-LSAADLSVALKPLTKLHRLSLRNC---GLS 251
HL+G V + R SG+ A SV P ++ +C GL+
Sbjct: 238 GPSHLRGHN-----VAEVQKREFVCSGHQSFMAPSCSVLHCPAACTCSNNIVDCRGKGLT 292
Query: 252 RLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTS 311
+P N T E+ + N + SP + L +D+ + + ++ F + S
Sbjct: 293 EIPTNLPETIT---EIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRS 349
Query: 312 LKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGN 371
L +L+L GNK+ L LF+ L L +L LN + L F + + +L L L N
Sbjct: 350 LNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLH---NLNLLSLYDN 406
Query: 372 PLHVLPDSTKQYSMRTIPT 390
L + T +R I T
Sbjct: 407 KLQTIAKGTFS-PLRAIQT 424
Score = 146 (56.5 bits), Expect = 8.2e-09, Sum P(2) = 8.2e-09
Identities = 85/320 (26%), Positives = 135/320 (42%)
Query: 68 KLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSH 127
+LDL+GN + I F L L L L ++ I AF +L L+ L L++N L+
Sbjct: 59 RLDLNGNNITRITKTDFAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNHLQLF 118
Query: 128 IDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNL 187
+ L LG KL LDL ++ I +P F ++NL L N++ ++ + L
Sbjct: 119 PE-LLFLGT-AKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAF--RAL 174
Query: 188 VHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVA-LKP-LTKLHRLSL 245
L+ L L+N ++ LS +F + KLRT L N L D +A L L + R+ L
Sbjct: 175 RDLEVLTLNNNNITR-LSVASFNHMPKLRTFRLHSNNLYC-DCHLAWLSDWLRQRPRVGL 232
Query: 246 -RNC-GLSRLPANTFHRFTCLQELDISHNPLIDAFTALLS-PLE---SLEHLDMGYSNLQ 299
C G S L + + + H + ++L P S +D L
Sbjct: 233 YTQCMGPSHLRGHNVAEVQKREFVCSGHQSFMAPSCSVLHCPAACTCSNNIVDCRGKGLT 292
Query: 300 RISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYT 359
I + +T ++ L N ++ + G F L ++L+N ++ L F
Sbjct: 293 EIPTNLPETITEIR---LEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQG--- 346
Query: 360 YPDLEELRLSGNPLHVLPDS 379
L L L GN + LP S
Sbjct: 347 LRSLNSLVLYGNKITELPKS 366
Score = 136 (52.9 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 83/359 (23%), Positives = 143/359 (39%)
Query: 22 INLNANPIQPVE--GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRII 79
+ LN N +E G F L + ++ I F + +N++ L+ N L +
Sbjct: 538 LRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENV 597
Query: 80 EPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGK 139
+ +F L SL+ LML +T + +F L+ ++ L L N++ + L
Sbjct: 598 QHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAF--DTLHS 655
Query: 140 LDTLDLRQSGISNLPDNVFANNTWLRNLNLAENE--------LIDLDVATTLGQNLVHLD 191
L TL+L + N + WLR + L ++ + Q+ D
Sbjct: 656 LSTLNLLANPF-NCNCYLAWLGEWLRKKRIVTGNPRCQKPYFLKEIPIQDVAIQDFTCDD 714
Query: 192 SLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTK-LHRLSLRNCGL 250
D ++C PLS T L T+ N L V K + + + L L
Sbjct: 715 GNDDNSC---SPLSRCP-TECTCLDTVVRCSNK----GLKVLPKGIPRDVTELYLDGNQF 766
Query: 251 SRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMT 310
+ +P + L +D+S+N + S + L L + Y+ L+ I TF +
Sbjct: 767 TLVPKE-LSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLK 825
Query: 311 SLKTLILSGNKLETLESGLFQNLTHLSVLELN------NCGLTRLNETVFHENYTYPDL 363
SL+ L L GN + + G F +L+ LS L + +C + L++ V E Y P +
Sbjct: 826 SLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSDWVKSE-YKEPGI 883
Score = 117 (46.2 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 55/202 (27%), Positives = 94/202 (46%)
Query: 52 LSKINPQFFTNLTTLN--KLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFD 109
L+K+ PQ + + +D G LR + + P + E L LN N+T I+ + F
Sbjct: 20 LNKVAPQACPAQCSCSGSTVDCHGLALRSVPRNI--PRNT-ERLDLNGNNITRITKTDFA 76
Query: 110 NLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNL 169
L HL+ L+L +NK+ S I+ +L +L+ L L ++ + P+ +F L L+L
Sbjct: 77 GLRHLRVLQLMENKI-STIERG-AFQDLKELERLRLNRNHLQLFPELLFLGTAKLYRLDL 134
Query: 170 AENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAAD 229
+EN++ + G V + +L L + + + AF L L L+ N ++
Sbjct: 135 SENQIQAIPRKAFRGA--VDIKNLQLDYNQISC-IEDGAFRALRDLEVLTLNNNNITR-- 189
Query: 230 LSVA-LKPLTKLHRLSLRNCGL 250
LSVA + KL L + L
Sbjct: 190 LSVASFNHMPKLRTFRLHSNNL 211
Score = 115 (45.5 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 31/89 (34%), Positives = 45/89 (50%)
Query: 289 EHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTR 348
E LD+ +N+ RI+++ F + L+ L L NK+ T+E G FQ+L L L LN L
Sbjct: 58 ERLDLNGNNITRITKTDFAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNHLQL 117
Query: 349 LNETVFHENYTYPDLEELRLSGNPLHVLP 377
E +F L L LS N + +P
Sbjct: 118 FPELLFLGT---AKLYRLDLSENQIQAIP 143
Score = 115 (45.5 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 34/107 (31%), Positives = 50/107 (46%)
Query: 17 PGLITINLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNP 75
P L IN + N I +E GAF A + + + L + + F L +L L L N
Sbjct: 558 PQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNR 617
Query: 76 LRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQN 122
+ + F L+S+ L L +T ++P AFD L+ L TL L N
Sbjct: 618 ITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLAN 664
Score = 107 (42.7 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 30/100 (30%), Positives = 49/100 (49%)
Query: 278 FTALLSPLESLEHL---DMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLT 334
FT + L + +HL D+ + + +S +F MT L TLILS N+L + F L
Sbjct: 766 FTLVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLK 825
Query: 335 HLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLH 374
L +L L+ ++ + E F++ L L + NPL+
Sbjct: 826 SLRLLSLHGNDISVVPEGAFND---LSALSHLAIGANPLY 862
Score = 78 (32.5 bits), Expect = 2.7e-13, Sum P(2) = 2.7e-13
Identities = 33/180 (18%), Positives = 71/180 (39%)
Query: 369 SGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNET-VFHENYTYPDLEELRLSGN 427
S L+ +P+ QY T ++ N +F V L T +F + P L ++ S N
Sbjct: 520 SNQKLNKIPEHIPQY---TAELRL-NNNEFTV----LEATGIFKK---LPQLRKINFSNN 568
Query: 428 PLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSF 487
+ + G +++ + +F ++ +L L +N ++ SF
Sbjct: 569 KITDIEEGAFEGASGVNEILLTSN--RLENVQHKMFKGLESLKTLMLRSNRITCVGNDSF 626
Query: 488 QFXXXXXXXXXXXXXXXXXTHISPTVLRHNRAITSIKLVGNPWKCDCNIADMWEWATREK 547
T ++P +++++ L+ NP+ C+C +A + EW +++
Sbjct: 627 ---IGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKR 683
Score = 62 (26.9 bits), Expect = 8.0e-13, Sum P(2) = 8.0e-13
Identities = 26/135 (19%), Positives = 46/135 (34%)
Query: 418 DLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANN 477
D+ EL L GN ++P +I L F+N + +L L+ N
Sbjct: 755 DVTELYLDGNQFTLVPK---ELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 811
Query: 478 NLSMTSELSFQFXXXXXXXXXXXXXXXXXTHISPTVLRHNRAITSIKLVGNPWKCDCNIA 537
L +F + + A++ + + NP CDCN+
Sbjct: 812 RLRCIPPRTFD---GLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQ 868
Query: 538 DMWEWATREKGDIGV 552
+ +W E + G+
Sbjct: 869 WLSDWVKSEYKEPGI 883
Score = 56 (24.8 bits), Expect = 0.00030, Sum P(3) = 0.00030
Identities = 17/70 (24%), Positives = 29/70 (41%)
Query: 419 LEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNN 478
+ E+RL N + V+P G +I L P+ F R++ SL L N
Sbjct: 302 ITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNN--QISELAPDAFQGLRSLNSLVLYGNK 359
Query: 479 LSMTSELSFQ 488
++ + F+
Sbjct: 360 ITELPKSLFE 369
Score = 53 (23.7 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 9/19 (47%), Positives = 14/19 (73%)
Query: 518 RAITSIKLVGNPWKCDCNI 536
RAI ++ L NP+ CDC++
Sbjct: 420 RAIQTMHLAQNPFICDCHL 438
>UNIPROTKB|F1N365 [details] [associations]
symbol:FLII "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003779 "actin binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007122 PRINTS:PR00597
PROSITE:PS51450 SMART:SM00262 GO:GO:0007275 GO:GO:0005634
GO:GO:0005737 GO:GO:0005813 InterPro:IPR007123 PANTHER:PTHR11977
Pfam:PF00626 EMBL:DAAA02048990 InterPro:IPR025875 Pfam:PF12799
GeneTree:ENSGT00660000095502 OMA:MEEWNED IPI:IPI00692791
Ensembl:ENSBTAT00000021517 Uniprot:F1N365
Length = 1268
Score = 212 (79.7 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 83/285 (29%), Positives = 136/285 (47%)
Query: 7 VYNDRRNLDNPGLITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTL 66
V +D LD+ L ++L+ N + A+++L L + ++ I Q F NLT L
Sbjct: 96 VPDDIFKLDD--LSVLDLSYNQLTECPRELENAKNMLVLNLSHNSIDSIPNQLFINLTDL 153
Query: 67 NKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKS 126
LDLS N L + P + L L+ L+LN L + L L+TL L +N ++
Sbjct: 154 LYLDLSENRLESLPPQM-RRLVHLQTLVLNGNPLLHAQLRQLPALTALQTLHL-RNTQRT 211
Query: 127 HIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQN 186
+ L L L +DL + ++ +P+ ++A LR LNL+ N++ +L +
Sbjct: 212 QSNLPTSLEGLSHLADVDLSCNDLTRVPECLYAL-PGLRRLNLSSNQIAELSLCI---DQ 267
Query: 187 LVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLR 246
VHL++L+LS L S A TKL+ LYL+ N L L + L+ L
Sbjct: 268 WVHLETLNLSRNQLTSLPS--AICKLTKLKRLYLNSNQLDFDGLPSGIGKLSSLEEFMAA 325
Query: 247 NCGLSRLPANTFHRFTCLQELDISHNPLIDAFTAL--LSPLESLE 289
N L +P + R T L++L ++ N L+ A+ L+ +E L+
Sbjct: 326 NNKLELIP-ESLCRCTKLRKLVLNKNRLVTLPEAIHFLTEIEVLD 369
Score = 184 (69.8 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 87/322 (27%), Positives = 146/322 (45%)
Query: 22 INLNANPIQPVEGAFLVARSLLYLYMQECTLSKIN-PQFFTNLTTLNKLDLSGNPLRIIE 80
++++ N + + G SL + + +L P L L+ LDLS N L
Sbjct: 61 LSVSHNNLTTLHGELSSLPSLRAIVARANSLKNSGVPDDIFKLDDLSVLDLSYNQLTEC- 119
Query: 81 PGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKL 140
P + ++ L L+ ++ I F NL L L+LS+N+L+S + L L
Sbjct: 120 PRELENAKNMLVLNLSHNSIDSIPNQLFINLTDLLYLDLSENRLES---LPPQMRRLVHL 176
Query: 141 DTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHL 200
TL L + + + T L+ L+L + ++ T+L + L HL +DLS C+
Sbjct: 177 QTLVLNGNPLLHAQLRQLPALTALQTLHLRNTQRTQSNLPTSL-EGLSHLADVDLS-CND 234
Query: 201 KGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHR 260
+ E + LR L LS N + A+LS+ + L L+L L+ LP+ +
Sbjct: 235 LTRVPECLYA-LPGLRRLNLSSNQI--AELSLCIDQWVHLETLNLSRNQLTSLPS-AICK 290
Query: 261 FTCLQELDISHNPL-IDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSG 319
T L+ L ++ N L D + + L SLE + L+ I S + T L+ L+L+
Sbjct: 291 LTKLKRLYLNSNQLDFDGLPSGIGKLSSLEEFMAANNKLELIPES-LCRCTKLRKLVLNK 349
Query: 320 NKLETLESGLFQNLTHLSVLEL 341
N+L TL + LT + VL++
Sbjct: 350 NRLVTLPEAI-HFLTEIEVLDV 370
Score = 173 (66.0 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 95/318 (29%), Positives = 150/318 (47%)
Query: 87 LTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKS-HIDWTLVLGNLGKLDTLDL 145
+TSL +L LNR L Y+ P +L L+ L +S N L + H + L +L L +
Sbjct: 32 MTSLRWLKLNRTGLCYL-PEELASLQKLEHLSVSHNNLTTLHGE----LSSLPSLRAIVA 86
Query: 146 RQSGISN--LPDNVFANNTWLRNLNLAENELID----LDVATT-LGQNLVH--LDSL--- 193
R + + N +PD++F + L L+L+ N+L + L+ A L NL H +DS+
Sbjct: 87 RANSLKNSGVPDDIFKLDD-LSVLDLSYNQLTECPRELENAKNMLVLNLSHNSIDSIPNQ 145
Query: 194 ---DLSNCHLKGPLSEDAFVNA-------TKLRTLYLSGNPLSAADLSVALKPLTKLHRL 243
+L++ L LSE+ + L+TL L+GNPL A L L LT L L
Sbjct: 146 LFINLTDL-LYLDLSENRLESLPPQMRRLVHLQTLVLNGNPLLHAQLR-QLPALTALQTL 203
Query: 244 SLRNCGLSRLPANT-FHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRIS 302
LRN ++ T + L ++D+S N L L + L L L++ + + +S
Sbjct: 204 HLRNTQRTQSNLPTSLEGLSHLADVDLSCNDLTRVPECLYA-LPGLRRLNLSSNQIAELS 262
Query: 303 RSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENY-TYP 361
+ L+TL LS N+L +L S + + LT L L LN+ +L+
Sbjct: 263 LCID-QWVHLETLNLSRNQLTSLPSAICK-LTKLKRLYLNS---NQLDFDGLPSGIGKLS 317
Query: 362 DLEELRLSGNPLHVLPDS 379
LEE + N L ++P+S
Sbjct: 318 SLEEFMAANNKLELIPES 335
>UNIPROTKB|F1NY48 [details] [associations]
symbol:RXFP1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004930 "G-protein coupled receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007188 "adenylate cyclase-modulating G-protein coupled
receptor signaling pathway" evidence=IEA] [GO:0007567 "parturition"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030198 "extracellular matrix organization" evidence=IEA]
[GO:0042562 "hormone binding" evidence=IEA] [GO:0060427 "lung
connective tissue development" evidence=IEA] [GO:0060658 "nipple
morphogenesis" evidence=IEA] InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002172 InterPro:IPR008112 InterPro:IPR017452
Pfam:PF00001 Pfam:PF00057 PRINTS:PR00237 PRINTS:PR01739
PROSITE:PS50068 PROSITE:PS50262 PROSITE:PS51450 SMART:SM00192
GO:GO:0016021 GO:GO:0030154 GO:GO:0004930 InterPro:IPR003591
SMART:SM00369 GO:GO:0030198 GO:GO:0042562 GO:GO:0007188
Gene3D:4.10.400.10 InterPro:IPR023415 SUPFAM:SSF57424
PROSITE:PS01209 InterPro:IPR000372 SMART:SM00013 OMA:YTLTTRP
GeneTree:ENSGT00650000093266 EMBL:AADN02016502 IPI:IPI00603372
ProteinModelPortal:F1NY48 Ensembl:ENSGALT00000015353 Uniprot:F1NY48
Length = 755
Score = 209 (78.6 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 74/262 (28%), Positives = 126/262 (48%)
Query: 3 QGHPVYNDRRNL-DNP----GLITINLNANPIQPVEG-AFLVARSLLYLYMQECTLSKIN 56
QG V+ D L D P + T++L N ++ + F + L LY+Q+ + ++
Sbjct: 104 QGLEVFCDAAKLRDVPLVPSNITTMSLQKNLLRKLYADVFRKYQDLKNLYLQDNKIRAVS 163
Query: 57 PQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKT 116
F L L KL LS N + ++P VF+ L LE+L++ + ISPS F L L
Sbjct: 164 KHAFKGLYNLTKLYLSNNKITNLKPRVFEDLHKLEWLIIENNRINRISPSTFYGLKSLIL 223
Query: 117 LELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELID 176
L++ N L +H+ + + +L+ LDL + I +L + F + + L L + +N++
Sbjct: 224 LDMMNNSL-AHLPDKPLCQYMPRLNWLDLEGNHIHHLRNVTFISCSTLTVLVMRQNKISS 282
Query: 177 LDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKP 236
L+ + +L LD LDL++ ++ L F + +L L LS NP+ +
Sbjct: 283 LNENSF--SSLQMLDELDLASNEIES-LPAYVFKDLKELSQLNLSYNPIKKIQID-QFDF 338
Query: 237 LTKLHRLSLRNCGLSRLPANTF 258
LTKL LSL ++ + F
Sbjct: 339 LTKLKSLSLEGIEIANIQRRMF 360
Score = 176 (67.0 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 68/263 (25%), Positives = 122/263 (46%)
Query: 88 TSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQ 147
+++ + L + L + F LK L L NK+++ + G L L L L
Sbjct: 123 SNITTMSLQKNLLRKLYADVFRKYQDLKNLYLQDNKIRA-VSKHAFKG-LYNLTKLYLSN 180
Query: 148 SGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLG-QNLVHLDSLDLSNCHLKG-PLS 205
+ I+NL VF + L L + N + + +T G ++L+ LD ++ S HL PL
Sbjct: 181 NKITNLKPRVFEDLHKLEWLIIENNRINRISPSTFYGLKSLILLDMMNNSLAHLPDKPLC 240
Query: 206 EDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQ 265
+ ++ +L L L GN + +V + L L +R +S L N+F L
Sbjct: 241 Q--YM--PRLNWLDLEGNHIHHLR-NVTFISCSTLTVLVMRQNKISSLNENSFSSLQMLD 295
Query: 266 ELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETL 325
ELD++ N + + L+ L L++ Y+ +++I F +T LK+L L G ++ +
Sbjct: 296 ELDLASNEIESLPAYVFKDLKELSQLNLSYNPIKKIQIDQFDFLTKLKSLSLEGIEIANI 355
Query: 326 ESGLF---QNLTHLSVLELNNCG 345
+ +F +NL+H+ + CG
Sbjct: 356 QRRMFIPLRNLSHIYFKKFQYCG 378
>TAIR|locus:2154463 [details] [associations]
symbol:AT5G23400 species:3702 "Arabidopsis thaliana"
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0006952 "defense
response" evidence=ISS] [GO:0007165 "signal transduction"
evidence=IC] [GO:0005618 "cell wall" evidence=IDA] [GO:0005829
"cytosol" evidence=RCA] [GO:0009506 "plasmodesma" evidence=IDA]
Pfam:PF00560 InterPro:IPR001611 GO:GO:0009506 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005618 eggNOG:COG4886
InterPro:IPR013210 Pfam:PF08263 HOGENOM:HOG000066206 EMBL:AB018110
EMBL:AY093083 EMBL:BT003360 IPI:IPI00537480 RefSeq:NP_197731.1
UniGene:At.7017 ProteinModelPortal:Q9FHL8 SMR:Q9FHL8 PaxDb:Q9FHL8
PRIDE:Q9FHL8 EnsemblPlants:AT5G23400.1 GeneID:832405
KEGG:ath:AT5G23400 TAIR:At5g23400 InParanoid:Q9FHL8 OMA:RANRLCG
PhylomeDB:Q9FHL8 ProtClustDB:CLSN2686144 ArrayExpress:Q9FHL8
Genevestigator:Q9FHL8 Uniprot:Q9FHL8
Length = 589
Score = 207 (77.9 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 97/335 (28%), Positives = 150/335 (44%)
Query: 57 PQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKT 116
P F+NLT+L +L L N L+ L LE L L + + P++F +L L T
Sbjct: 125 PNSFSNLTSLRQLILDDNSLQGNVLSSLGHLPLLEILSLAGNRFSGLVPASFGSLRRLTT 184
Query: 117 LELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISN-LPDNV--FANNTWLRNLNLAENE 173
+ L++N I T NL KL+ LDL + +S +PD + F N L NL L+ N
Sbjct: 185 MNLARNSFSGPIPVTFK--NLLKLENLDLSSNLLSGPIPDFIGQFQN---LTNLYLSSNR 239
Query: 174 LIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVA 233
V +L L ++ L L GPLS D F L +L LSGN + +
Sbjct: 240 FSG--VLPVSVYSLRKLQTMSLERNGLTGPLS-DRFSYLKSLTSLQLSGNKF-IGHIPAS 295
Query: 234 LKPLTKLHRLSL-RNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLD 292
+ L L L+L RN LP F L +D+S+N L A+ S + + D
Sbjct: 296 ITGLQNLWSLNLSRNLFSDPLPVVGARGFPSLLSIDLSYNNL--NLGAIPSWIRDKQLSD 353
Query: 293 MGYSNLQRISRSTFLKMT---SLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLT-R 348
+ + + R TF K+T +L +L LS N L S +LT++ ++L+ L
Sbjct: 354 INLAGCKL--RGTFPKLTRPTTLTSLDLSDNFLTGDVSAFLTSLTNVQKVKLSKNQLRFD 411
Query: 349 LNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQY 383
L++ E DL ++G+ ++ + T +
Sbjct: 412 LSKLKLPEGVASIDLSSNLVTGSLSSLINNKTSSF 446
Score = 163 (62.4 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 88/334 (26%), Positives = 143/334 (42%)
Query: 19 LITINLNANPIQ-PVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLR 77
L T+NL N P+ F L L + LS P F L L LS N
Sbjct: 182 LTTMNLARNSFSGPIPVTFKNLLKLENLDLSSNLLSGPIPDFIGQFQNLTNLYLSSNRFS 241
Query: 78 IIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNL 137
+ P L L+ + L R LT F L L +L+LS NK HI ++ L
Sbjct: 242 GVLPVSVYSLRKLQTMSLERNGLTGPLSDRFSYLKSLTSLQLSGNKFIGHIPASIT--GL 299
Query: 138 GKLDTLDLRQSGISN-LPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLS 196
L +L+L ++ S+ LP L +++L+ N L +L + ++ L ++L+
Sbjct: 300 QNLWSLNLSRNLFSDPLPVVGARGFPSLLSIDLSYNNL-NLGAIPSWIRDK-QLSDINLA 357
Query: 197 NCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPAN 256
C L+G + T L +L LS N L+ D+S L LT + ++ L L R +
Sbjct: 358 GCKLRGTFPK--LTRPTTLTSLDLSDNFLTG-DVSAFLTSLTNVQKVKLSKNQL-RFDLS 413
Query: 257 TFHRFTCLQELDISHNPLIDAFTALLSPLES--LEHLDMGYSNLQRISR-STFLKMTSLK 313
+ +D+S N + + ++L++ S LE + + +N Q R F + +LK
Sbjct: 414 KLKLPEGVASIDLSSNLVTGSLSSLINNKTSSFLEEIHL--TNNQISGRIPDFGESLNLK 471
Query: 314 TLILSGNKLETLESGLFQNLTHLSVLELNNCGLT 347
L + NK+ NL L L+++ +T
Sbjct: 472 VLNIGSNKISGQIPSSISNLVELVRLDISRNHIT 505
Score = 135 (52.6 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 97/366 (26%), Positives = 162/366 (44%)
Query: 17 PGLITINLNANPIQP-VEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNP 75
P L ++L N V +F R L + + + S P F NL L LDLS N
Sbjct: 156 PLLEILSLAGNRFSGLVPASFGSLRRLTTMNLARNSFSGPIPVTFKNLLKLENLDLSSNL 215
Query: 76 LRIIEP---GVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTL 132
L P G F LT+L YL NR + + P + +L L+T+ L +N L +
Sbjct: 216 LSGPIPDFIGQFQNLTNL-YLSSNR--FSGVLPVSVYSLRKLQTMSLERNGLTGPLSDRF 272
Query: 133 VLGNLGKLDTLDLRQSG-ISNLPDNVFA-NNTWLRNLNLAENELID-LDVATTLG-QNLV 188
L L +L L + I ++P ++ N W +LNL+ N D L V G +L+
Sbjct: 273 --SYLKSLTSLQLSGNKFIGHIPASITGLQNLW--SLNLSRNLFSDPLPVVGARGFPSLL 328
Query: 189 HLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNC 248
+D L +N +L G + +++ +L + L+G L + +P T L L L +
Sbjct: 329 SID-LSYNNLNL-GAIP--SWIRDKQLSDINLAGCKLRGTFPKLT-RPTT-LTSLDLSDN 382
Query: 249 GLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFL- 307
L+ + T +Q++ +S N L + L P E + +D+ SNL S S+ +
Sbjct: 383 FLTGDVSAFLTSLTNVQKVKLSKNQLRFDLSKLKLP-EGVASIDLS-SNLVTGSLSSLIN 440
Query: 308 -KMTS-LKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEE 365
K +S L+ + L+ N++ SG + L++ N G +++ + +L
Sbjct: 441 NKTSSFLEEIHLTNNQI----SGRIPDFGESLNLKVLNIGSNKISGQIPSSISNLVELVR 496
Query: 366 LRLSGN 371
L +S N
Sbjct: 497 LDISRN 502
>UNIPROTKB|Q86VH5 [details] [associations]
symbol:LRRTM3 "Leucine-rich repeat transmembrane neuronal
protein 3" species:9606 "Homo sapiens" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 HOGENOM:HOG000290681
HOVERGEN:HBG052362 EMBL:AY182028 EMBL:AY358315 EMBL:AK290168
EMBL:BX640611 EMBL:BC111492 EMBL:BC113715 EMBL:BC113717
IPI:IPI00179801 IPI:IPI00607819 RefSeq:NP_821079.3
UniGene:Hs.652155 ProteinModelPortal:Q86VH5 SMR:Q86VH5
STRING:Q86VH5 PhosphoSite:Q86VH5 DMDM:68052341 PaxDb:Q86VH5
PRIDE:Q86VH5 DNASU:347731 Ensembl:ENST00000361320
Ensembl:ENST00000373722 GeneID:347731 KEGG:hsa:347731
UCSC:uc001jmy.3 UCSC:uc001jmz.1 CTD:347731 GeneCards:GC10P068685
HGNC:HGNC:19410 HPA:HPA024109 MIM:610869 neXtProt:NX_Q86VH5
PharmGKB:PA134962991 InParanoid:Q86VH5 OMA:PCTYSKS
OrthoDB:EOG45TCMT PhylomeDB:Q86VH5 GenomeRNAi:347731 NextBio:99254
ArrayExpress:Q86VH5 Bgee:Q86VH5 CleanEx:HS_LRRTM3
Genevestigator:Q86VH5 Uniprot:Q86VH5
Length = 581
Score = 188 (71.2 bits), Expect = 3.3e-13, Sum P(2) = 3.3e-13
Identities = 74/278 (26%), Positives = 121/278 (43%)
Query: 150 ISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAF 209
+ +P ++ A L+L N L L G N L L L + H+ + E+AF
Sbjct: 52 LQEIPSSISAG---CLGLSLRYNSLQKLKYNQFKGLN--QLTWLYLDHNHISN-IDENAF 105
Query: 210 VNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDI 269
+L+ L LS N +S L+ +P+T L L L L L + F L L +
Sbjct: 106 NGIRRLKELILSSNRISYF-LNNTFRPVTNLRNLDLSYNQLHSLGSEQFRGLRKLLSLHL 164
Query: 270 SHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGL 329
N L + +LE LD+GY+ ++ ++R+ F M LK L L N+ L L
Sbjct: 165 RSNSLRTIPVRIFQDCRNLELLDLGYNRIRSLARNVFAGMIRLKELHLEHNQFSKLNLAL 224
Query: 330 FQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIP 389
F L L L L ++ + +T+ ++T+ L+ L LSGN + + + +P
Sbjct: 225 FPRLVSLQNLYLQWNKISVIGQTM---SWTWSSLQRLDLSGNEIEAFSGPSV---FQCVP 278
Query: 390 TQIWKNFDFLVILFILNETVFHENYTYPDLEELRLSGN 427
N D + FI E + ++ L ++ L+GN
Sbjct: 279 NLQRLNLDSNKLTFIGQEILD----SWISLNDISLAGN 312
Score = 176 (67.0 bits), Expect = 6.7e-12, Sum P(2) = 6.7e-12
Identities = 67/256 (26%), Positives = 115/256 (44%)
Query: 18 GLITINLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPL 76
G + ++L N +Q ++ F L +LY+ +S I+ F + L +L LS N +
Sbjct: 62 GCLGLSLRYNSLQKLKYNQFKGLNQLTWLYLDHNHISNIDENAFNGIRRLKELILSSNRI 121
Query: 77 RIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGN 136
F P+T+L L L+ L + F L L +L L N L++ I + +
Sbjct: 122 SYFLNNTFRPVTNLRNLDLSYNQLHSLGSEQFRGLRKLLSLHLRSNSLRT-IP-VRIFQD 179
Query: 137 LGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLS 196
L+ LDL + I +L NVFA L+ L+L N+ L++A L LV L +L L
Sbjct: 180 CRNLELLDLGYNRIRSLARNVFAGMIRLKELHLEHNQFSKLNLA--LFPRLVSLQNLYLQ 237
Query: 197 NCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPAN 256
+ + + + L+ L LSGN + A + + L RL+L + L+ +
Sbjct: 238 WNKIS-VIGQTMSWTWSSLQRLDLSGNEIEAFSGPSVFQCVPNLQRLNLDSNKLTFIGQE 296
Query: 257 TFHRFTCLQELDISHN 272
+ L ++ ++ N
Sbjct: 297 ILDSWISLNDISLAGN 312
Score = 154 (59.3 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 68/278 (24%), Positives = 120/278 (43%)
Query: 38 VARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNR 97
++ L L ++ +L K+ F L L L L N + I+ F+ + L+ L+L+
Sbjct: 59 ISAGCLGLSLRYNSLQKLKYNQFKGLNQLTWLYLDHNHISNIDENAFNGIRRLKELILSS 118
Query: 98 CNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNV 157
++Y + F + +L+ L+LS N+L S + G L KL +L LR + + +P +
Sbjct: 119 NRISYFLNNTFRPVTNLRNLDLSYNQLHS-LGSEQFRG-LRKLLSLHLRSNSLRTIPVRI 176
Query: 158 FANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRT 217
F + L L+L N + L A + ++ L L L + L+ F L+
Sbjct: 177 FQDCRNLELLDLGYNRIRSL--ARNVFAGMIRLKELHLEHNQFS-KLNLALFPRLVSLQN 233
Query: 218 LYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPA-NTFHRFTCLQELDISHNPLID 276
LYL N +S +++ + L RL L + + F LQ L++ N L
Sbjct: 234 LYLQWNKISVIGQTMSWT-WSSLQRLDLSGNEIEAFSGPSVFQCVPNLQRLNLDSNKLTF 292
Query: 277 AFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKT 314
+L SL + + N+ SR+ + LK+
Sbjct: 293 IGQEILDSWISLNDISLA-GNIWECSRNICSLVNWLKS 329
Score = 141 (54.7 bits), Expect = 4.4e-08, Sum P(2) = 4.4e-08
Identities = 56/245 (22%), Positives = 105/245 (42%)
Query: 235 KPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMG 294
K L +L L L + +S + N F+ L+EL +S N + P+ +L +LD+
Sbjct: 82 KGLNQLTWLYLDHNHISNIDENAFNGIRRLKELILSSNRISYFLNNTFRPVTNLRNLDLS 141
Query: 295 YSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVF 354
Y+ L + F + L +L L N L T+ +FQ+ +L +L+L + L VF
Sbjct: 142 YNQLHSLGSEQFRGLRKLLSLHLRSNSLRTIPVRIFQDCRNLELLDLGYNRIRSLARNVF 201
Query: 355 HENYTYPDLEELRLSGNPLHVLPDST--KQYSMRTIPTQIWKNFDFLVILFILNETVFHE 412
L+EL L N L + + S++ + Q W ++ +T+
Sbjct: 202 AGMIR---LKELHLEHNQFSKLNLALFPRLVSLQNLYLQ-WNKIS------VIGQTM--- 248
Query: 413 NYTYPDLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSL 472
++T+ L+ L LSGN + +G K+ ++ + ++ ++ +
Sbjct: 249 SWTWSSLQRLDLSGNEIEAF-SGPSVFQCVPNLQRLNLDSNKLTFIGQEILDSWISLNDI 307
Query: 473 NLANN 477
+LA N
Sbjct: 308 SLAGN 312
Score = 116 (45.9 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 60/243 (24%), Positives = 99/243 (40%)
Query: 243 LSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRIS 302
LSLR L +L N F L L + HN + + + + L+ L + + +
Sbjct: 66 LSLRYNSLQKLKYNQFKGLNQLTWLYLDHNHISNIDENAFNGIRRLKELILSSNRISYFL 125
Query: 303 RSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPD 362
+TF +T+L+ L LS N+L +L S F+ L L L L + L + +F + +
Sbjct: 126 NNTFRPVTNLRNLDLSYNQLHSLGSEQFRGLRKLLSLHLRSNSLRTIPVRIFQD---CRN 182
Query: 363 LEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTYPDLEEL 422
LE L L N + L + +R + N F LN +F + L+ L
Sbjct: 183 LELLDLGYNRIRSLARNVFAGMIRLKELHLEHN-QFSK----LNLALFPRLVS---LQNL 234
Query: 423 RLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKID-YLPPNVFNNTRNITSLNLANNNLSM 481
L N + V+ G +I+ + P+VF N+ LNL +N L+
Sbjct: 235 YLQWNKISVI--GQTMSWTWSSLQRLDLSGNEIEAFSGPSVFQCVPNLQRLNLDSNKLTF 292
Query: 482 TSE 484
+
Sbjct: 293 IGQ 295
Score = 66 (28.3 bits), Expect = 3.3e-13, Sum P(2) = 3.3e-13
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 507 THISPTVLRHNRAITSIKLVGNPWKCDCNIADMWEWATREKG 548
T I +L ++ I L GN W+C NI + W KG
Sbjct: 291 TFIGQEILDSWISLNDISLAGNIWECSRNICSLVNWLKSFKG 332
>RGD|1308668 [details] [associations]
symbol:Lingo1 "leucine rich repeat and Ig domain containing 1"
species:10116 "Rattus norvegicus" [GO:0005154 "epidermal growth
factor receptor binding" evidence=ISO] [GO:0021954 "central nervous
system neuron development" evidence=ISO] [GO:0031175 "neuron
projection development" evidence=ISO] [GO:0043491 "protein kinase B
signaling cascade" evidence=ISO] [GO:0048715 "negative regulation
of oligodendrocyte differentiation" evidence=ISO]
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 RGD:1308668 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0043491
GO:GO:0031175 InterPro:IPR013098 Pfam:PF07679 GO:GO:0021954
MEROPS:I43.001 GO:GO:0048715 HOGENOM:HOG000246971 OrthoDB:EOG40S0F8
CTD:84894 HOVERGEN:HBG057546 RefSeq:NP_001094192.1 UniGene:Rn.20269
GeneID:315691 KEGG:rno:315691 NextBio:669664 EMBL:BC092632
IPI:IPI00766651 ProteinModelPortal:Q562A6 STRING:Q562A6
PhosphoSite:Q562A6 UCSC:RGD:1308668 InParanoid:Q562A6
Genevestigator:Q562A6 Uniprot:Q562A6
Length = 517
Score = 203 (76.5 bits), Expect = 3.3e-13, Sum P(2) = 3.3e-13
Identities = 78/272 (28%), Positives = 128/272 (47%)
Query: 103 ISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNT 162
+ P AF+NL +L+TL L N+LK I + G L L LD+ ++ I L D +F +
Sbjct: 7 VEPGAFNNLFNLRTLGLRSNRLKL-IPLGVFTG-LSNLTKLDISENKIVILLDYMFQDLY 64
Query: 163 WLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSG 222
L++L + +N+L+ + G N L+ L L C+L + +A + L L L
Sbjct: 65 NLKSLEVGDNDLVYISHRAFSGLN--SLEQLTLEKCNLTS-IPTEALSHLHGLIVLRLRH 121
Query: 223 NPLSAADLSVALKPLTKLHRLSLRNCG-LSRLPANTFHRFTCLQELDISHNPLIDAFTAL 281
++A + K L +L L + + L + N + L L I+H L
Sbjct: 122 LNINAIR-DYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLN-LTSLSITHCNLTAVPYLA 179
Query: 282 LSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLEL 341
+ L L L++ Y+ + I S ++ L+ + L G +L +E F+ L +L VL +
Sbjct: 180 VRHLVYLRFLNLSYNPIGTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNV 239
Query: 342 NNCGLTRLNETVFHENYTYPDLEELRLSGNPL 373
+ LT L E+ FH + +LE L L NPL
Sbjct: 240 SGNQLTTLEESAFH---SVGNLETLILDSNPL 268
Score = 191 (72.3 bits), Expect = 7.2e-12, Sum P(2) = 7.2e-12
Identities = 69/272 (25%), Positives = 124/272 (45%)
Query: 74 NPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLV 133
N + +EPG F+ L +L L L L I F L++L L++S+NK+ +D+ +
Sbjct: 2 NIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDY--M 59
Query: 134 LGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSL 193
+L L +L++ + + + F+ L L L + L + + L HL L
Sbjct: 60 FQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPT-----EALSHLHGL 114
Query: 194 DLSNC-HLK-GPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLS 251
+ HL + + +F +L+ L +S P L L L LS+ +C L+
Sbjct: 115 IVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLN-LTSLSITHCNLT 173
Query: 252 RLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTS 311
+P L+ L++S+NP+ ++L L L+ + + L + F +
Sbjct: 174 AVPYLAVRHLVYLRFLNLSYNPIGTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNY 233
Query: 312 LKTLILSGNKLETLESGLFQNLTHLSVLELNN 343
L+ L +SGN+L TLE F ++ +L L L++
Sbjct: 234 LRVLNVSGNQLTTLEESAFHSVGNLETLILDS 265
Score = 184 (69.8 bits), Expect = 4.3e-11, Sum P(2) = 4.3e-11
Identities = 82/267 (30%), Positives = 123/267 (46%)
Query: 27 NPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFD 85
N + VE GAF +L L ++ L I FT L+ L KLD+S N + I+ +F
Sbjct: 2 NIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQ 61
Query: 86 PLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDL 145
L +L+ L + +L YIS AF LN L+ L L + L S I T L +L L L L
Sbjct: 62 DLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTS-IP-TEALSHLHGLIVLRL 119
Query: 146 RQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTL-GQNLVHLDSLDLSNCHLKGPL 204
R I+ + D F L+ L ++ +D L G NL SL +++C+L +
Sbjct: 120 RHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLT---SLSITHCNLTA-V 175
Query: 205 SEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCL 264
A + LR L LS NP+ + S+ L L +L + L L+ + F L
Sbjct: 176 PYLAVRHLVYLRFLNLSYNPIGTIEGSM-LHELLRLQEIQLVGGQLAVVEPYAFRGLNYL 234
Query: 265 QELDISHNPLIDAFTALLSPLESLEHL 291
+ L++S N L + + +LE L
Sbjct: 235 RVLNVSGNQLTTLEESAFHSVGNLETL 261
Score = 166 (63.5 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 66/275 (24%), Positives = 121/275 (44%)
Query: 49 ECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAF 108
E +S + P F NL L L L N L++I GVF L++L L ++ + + F
Sbjct: 1 ENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMF 60
Query: 109 DNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLN 168
+L +LK+LE+ N L +I G L L+ L L + ++++P ++ L L
Sbjct: 61 QDLYNLKSLEVGDNDLV-YISHRAFSG-LNSLEQLTLEKCNLTSIPTEALSH---LHGLI 115
Query: 169 LAENELIDLDVATTLG-QNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSA 227
+ ++++ + L L L++S+ ++ + L +L ++ L+A
Sbjct: 116 VLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLN-LTSLSITHCNLTA 174
Query: 228 ADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLES 287
+A++ L L L+L + + + H LQE+ + L L
Sbjct: 175 VPY-LAVRHLVYLRFLNLSYNPIGTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNY 233
Query: 288 LEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKL 322
L L++ + L + S F + +L+TLIL N L
Sbjct: 234 LRVLNVSGNQLTTLEESAFHSVGNLETLILDSNPL 268
Score = 125 (49.1 bits), Expect = 9.3e-05, Sum P(3) = 9.3e-05
Identities = 40/142 (28%), Positives = 65/142 (45%)
Query: 223 NPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALL 282
N +SA + A L L L LR+ L +P F + L +LDIS N ++ +
Sbjct: 2 NIVSAVEPG-AFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMF 60
Query: 283 SPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELN 342
L +L+ L++G ++L IS F + SL+ L L L ++ + +L L VL L
Sbjct: 61 QDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLR 120
Query: 343 NCGLTRLNETVFHENYTYPDLE 364
+ + + + F Y LE
Sbjct: 121 HLNINAIRDYSFKRLYRLKVLE 142
Score = 48 (22.0 bits), Expect = 3.3e-13, Sum P(2) = 3.3e-13
Identities = 25/105 (23%), Positives = 41/105 (39%)
Query: 520 ITSIKLVGNPWKCDCNIADMWEWATREKGDIGVLVGSTTPTEIGFGASRKKKGLVC---Y 576
+ ++ L NP CDC + +W + R + + + E G K V Y
Sbjct: 258 LETLILDSNPLACDCRL--LWVFRRRWRLNFNRQQPTCATPEFVQGKEFKDFPDVLLPNY 315
Query: 577 FDIFTTPTRKRPGRELFASTNKTWARYVKEADC--PSSKLFRPPR 619
F R R +++F T ++V AD P + L+ PR
Sbjct: 316 FTCRRAHIRDRKAQQVFVDEGHT-VQFVCRADGDPPPAILWLSPR 359
Score = 41 (19.5 bits), Expect = 9.3e-05, Sum P(3) = 9.3e-05
Identities = 10/32 (31%), Positives = 18/32 (56%)
Query: 455 IDYLPPNVFNNTRNITSLNLANNNLSMTSELS 486
+D + PN N+TSL++ + NL+ L+
Sbjct: 149 LDTMTPNCLYGL-NLTSLSITHCNLTAVPYLA 179
>UNIPROTKB|I3L187 [details] [associations]
symbol:PHLPP2 "PH domain leucine-rich repeat-containing
protein phosphatase 2" species:9606 "Homo sapiens" [GO:0003824
"catalytic activity" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR001932 Pfam:PF00481 PROSITE:PS51450 SMART:SM00332
GO:GO:0003824 InterPro:IPR003591 SMART:SM00369 GO:GO:0008152
InterPro:IPR025875 Pfam:PF12799 EMBL:AC009097 Gene3D:3.60.40.10
SUPFAM:SSF81606 HGNC:HGNC:29149 PRIDE:I3L187
Ensembl:ENST00000568004 Bgee:I3L187 Uniprot:I3L187
Length = 723
Score = 208 (78.3 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 119/438 (27%), Positives = 193/438 (44%)
Query: 66 LNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLK 125
L L+LS N L + P + +++L L L+ CN + PS NL +L+TL L N L
Sbjct: 39 LKGLNLSHNKLGLF-PILLCEISTLTELNLS-CNGFHDLPSQIGNLLNLQTLCLDGNFLT 96
Query: 126 SHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAEN--ELIDLDVATTL 183
+ + LGNL +L +L + + S +P+ V+ T L + +A N E+++L V +
Sbjct: 97 TLPE---ELGNLQQLSSLGISFNNFSQIPE-VYEKLTMLDRVVMAGNCLEVLNLGVLNRM 152
Query: 184 GQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLH-- 241
H+ +DL HLK + E+ N + + L N L+ DLS +L L +LH
Sbjct: 153 N----HIKHVDLRMNHLKTMVIENLEGNK-HITHVDLRDNRLTDLDLS-SLCSLEQLHCG 206
Query: 242 RLSLRNCGLSRLPANTFH----RFTC---------LQELDISHNPLIDAFTALLSPLESL 288
R LR LS T + R T L LD+S N L++ + +
Sbjct: 207 RNQLRELTLSGFSLRTLYASSNRLTAVNVYPVPSLLTFLDLSRN-LLECVPDWACEAKKI 265
Query: 289 EHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTR 348
E LD+ Y+ L + L SL+ L+L N ++ L + L +++ L VL+L + LTR
Sbjct: 266 EVLDVSYNLLTEVP-VRILSSLSLRKLMLGHNHVQNLPT-LVEHIP-LEVLDLQHNALTR 322
Query: 349 LNETVFHENYTYPDLEELRLSGNPLHVLPDS-TKQYSMRTIPTQIWKNFDFLVILFILNE 407
L +T+F + +L L S N L LP + T + S+ + N +L +
Sbjct: 323 LPDTLFSKAL---NLRYLNASANSLESLPSACTGEESLSMLQLLYLTNN-------LLTD 372
Query: 408 TVFHENYTYPDLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTR 467
+ L L L+ N L P K+ +P + N R
Sbjct: 373 QCIPVLVGHLHLRILHLANNQLQTFPASKLNKLEQLEELNLSGN--KLKTIPTTIANCKR 430
Query: 468 NITSLNLANNNLSMTSEL 485
+ +L +NN+S+ E+
Sbjct: 431 -LHTLVAHSNNISIFPEI 447
Score = 191 (72.3 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 94/335 (28%), Positives = 146/335 (43%)
Query: 41 SLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNL 100
SL LY L+ +N +L T LDLS N L + P +E L ++ L
Sbjct: 219 SLRTLYASSNRLTAVNVYPVPSLLTF--LDLSRNLLECV-PDWACEAKKIEVLDVSYNLL 275
Query: 101 TYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFAN 160
T + +L+ L+ L L N H+ L L+ LDL+ + ++ LPD +F+
Sbjct: 276 TEVPVRILSSLS-LRKLMLGHN----HVQNLPTLVEHIPLEVLDLQHNALTRLPDTLFSK 330
Query: 161 NTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYL 220
LR LN + N L L A T ++L L L L+N +L V LR L+L
Sbjct: 331 ALNLRYLNASANSLESLPSACTGEESLSMLQLLYLTN-NLLTDQCIPVLVGHLHLRILHL 389
Query: 221 SGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTA 280
+ N L S L L +L L+L L +P T L L ++H+ I F
Sbjct: 390 ANNQLQTFPAS-KLNKLEQLEELNLSGNKLKTIPT-TIANCKRLHTL-VAHSNNISIFPE 446
Query: 281 LLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLE 340
+L L ++ +D+ ++L I L T L+ L L+GN LE +H++ L+
Sbjct: 447 ILQ-LPQIQFVDLSCNDLTEILIPEALPAT-LQDLDLTGNTNLVLEHKTLDIFSHITTLK 504
Query: 341 LNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHV 375
++ L + TV +++ L E+ N L V
Sbjct: 505 IDQKPLPTTDSTVTSTFWSH-GLAEMAGQRNKLCV 538
Score = 169 (64.5 bits), Expect = 5.8e-09, P = 5.8e-09
Identities = 111/396 (28%), Positives = 174/396 (43%)
Query: 57 PQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKT 116
P ++TL +L+LS N + P L +L+ L L+ LT + P NL L +
Sbjct: 53 PILLCEISTLTELNLSCNGFHDL-PSQIGNLLNLQTLCLDGNFLTTL-PEELGNLQQLSS 110
Query: 117 LELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELID 176
L +S N S I V L LD + + + + L V +++++L N L
Sbjct: 111 LGISFNNF-SQIPE--VYEKLTMLDRVVMAGNCLEVLNLGVLNRMNHIKHVDLRMNHLKT 167
Query: 177 LDVATTLG-QNLVHLD-------SLDLSN-CHLK----GPLS-EDAFVNATKLRTLYLSG 222
+ + G +++ H+D LDLS+ C L+ G + ++ LRTLY S
Sbjct: 168 MVIENLEGNKHITHVDLRDNRLTDLDLSSLCSLEQLHCGRNQLRELTLSGFSLRTLYASS 227
Query: 223 NPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALL 282
N L+A ++ LT L LS RN L +P + ++ LD+S+N L + +L
Sbjct: 228 NRLTAVNVYPVPSLLTFLD-LS-RNL-LECVP-DWACEAKKIEVLDVSYNLLTEVPVRIL 283
Query: 283 SPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELN 342
S L SL L +G++++Q + T ++ L+ L L N L L LF +L L +
Sbjct: 284 SSL-SLRKLMLGHNHVQNLP--TLVEHIPLEVLDLQHNALTRLPDTLFSKALNLRYLNAS 340
Query: 343 NCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVIL 402
L L E + L+ L L+ N +L D + IP + L IL
Sbjct: 341 ANSLESLPSACTGEE-SLSMLQLLYLTNN---LLTD-------QCIPVLV--GHLHLRIL 387
Query: 403 FILNETV--FHENYT--YPDLEELRLSGNPLHVLPT 434
+ N + F + LEEL LSGN L +PT
Sbjct: 388 HLANNQLQTFPASKLNKLEQLEELNLSGNKLKTIPT 423
Score = 128 (50.1 bits), Expect = 0.00016, P = 0.00016
Identities = 70/314 (22%), Positives = 140/314 (44%)
Query: 57 PQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKT 116
P+ + LT L+++ ++GN L ++ GV + + ++++ L +L + + H+
Sbjct: 122 PEVYEKLTMLDRVVMAGNCLEVLNLGVLNRMNHIKHVDLRMNHLKTMVIENLEGNKHITH 181
Query: 117 LELSQNKLKSHIDWTLVLG----NLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNL--A 170
++L N+L + +D + + + G+ +L SG S ++A++ L +N+
Sbjct: 182 VDLRDNRL-TDLDLSSLCSLEQLHCGRNQLRELTLSGFSLR--TLYASSNRLTAVNVYPV 238
Query: 171 ENELIDLDVATTLGQ-------NLVHLDSLDLS-NCHLKGPLSEDAFVNATKLRTLYLSG 222
+ L LD++ L + ++ LD+S N + P+ +++ LR L L
Sbjct: 239 PSLLTFLDLSRNLLECVPDWACEAKKIEVLDVSYNLLTEVPVR---ILSSLSLRKLMLGH 295
Query: 223 NPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALL 282
N + V PL L L++ L+RLP F + L+ L+ S N L ++ +
Sbjct: 296 NHVQNLPTLVEHIPLEVL---DLQHNALTRLPDTLFSKALNLRYLNASANSL-ESLPSAC 351
Query: 283 SPLESLEHLDMGYSNLQRISRSTFLKMTS---LKTLILSGNKLETLESGLFQNLTHLSVL 339
+ ESL L + Y ++ + L+ L L+ N+L+T + L L L
Sbjct: 352 TGEESLSMLQLLYLTNNLLTDQCIPVLVGHLHLRILHLANNQLQTFPASKLNKLEQLEEL 411
Query: 340 ELNNCGLTRLNETV 353
L+ L + T+
Sbjct: 412 NLSGNKLKTIPTTI 425
Score = 124 (48.7 bits), Expect = 0.00044, P = 0.00044
Identities = 64/221 (28%), Positives = 95/221 (42%)
Query: 90 LEYLMLNRCNLTYISPSAFDNL---NHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLR 146
+ YL L + P D L + LK L LS NKL + ++L + L L+L
Sbjct: 12 ITYLNLRHNFMQLERPGGLDTLYKFSQLKGLNLSHNKLGL---FPILLCEISTLTELNLS 68
Query: 147 QSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLS-NCHLKGPLS 205
+G +LP + N L+ L L N L L LG NL L SL +S N + P
Sbjct: 69 CNGFHDLPSQI-GNLLNLQTLCLDGNFLTTLP--EELG-NLQQLSSLGISFNNFSQIP-- 122
Query: 206 EDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQ 265
+ + T L + ++GN L +L V L + + + LR L + +
Sbjct: 123 -EVYEKLTMLDRVVMAGNCLEVLNLGV-LNRMNHIKHVDLRMNHLKTMVIENLEGNKHIT 180
Query: 266 ELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTF 306
+D+ N L D LS L SLE L G + L+ ++ S F
Sbjct: 181 HVDLRDNRLTDLD---LSSLCSLEQLHCGRNQLRELTLSGF 218
>UNIPROTKB|F1SRC2 [details] [associations]
symbol:CHADL "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031012 "extracellular matrix" evidence=IDA]
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
SMART:SM00013 OMA:ICDNSRR GeneTree:ENSGT00700000104286
EMBL:CU407312 Ensembl:ENSSSCT00000000073 Uniprot:F1SRC2
Length = 757
Score = 174 (66.3 bits), Expect = 3.6e-13, Sum P(3) = 3.6e-13
Identities = 76/245 (31%), Positives = 102/245 (41%)
Query: 15 DNPGLITINLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSG 73
D P L ++L ++ V EGAF LL L + LS + + L +L +L+L G
Sbjct: 81 DLPYLTHLDLRHCQVELVAEGAFRGLGRLLLLNLASNRLSALPQEALDGLGSLRRLELEG 140
Query: 74 NPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLV 133
N L + PG F L +L L L L Y+ P AF L + L+LS N L +
Sbjct: 141 NLLEELRPGTFGALGALATLNLAHNALVYLPPMAFQGLVRARWLQLSHNALS--VLAPEA 198
Query: 134 LGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSL 193
L L L L L + + +LP + L L L N L L L L
Sbjct: 199 LAGLPALRRLSLHHNELQSLPGLALSQARGLARLELGHNPFTYAGEEDGLA--LPGLREL 256
Query: 194 DLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRN----CG 249
L + L+ L AF + +L TL L GN L A L P +L RL L+ CG
Sbjct: 257 RLEHGALQA-LDPRAFAHCPRLHTLDLRGNQLDA--LLPPQGP-GQLRRLQLQGNPLWCG 312
Query: 250 LSRLP 254
P
Sbjct: 313 CRARP 317
Score = 174 (66.3 bits), Expect = 3.6e-13, Sum P(3) = 3.6e-13
Identities = 79/266 (29%), Positives = 106/266 (39%)
Query: 57 PQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKT 116
P LT +LDL GN LR+I P F L L +L L C + ++ AF L L
Sbjct: 54 PNAIPELT--QRLDLRGNVLRVIPPAAFQDLPYLTHLDLRHCQVELVAEGAFRGLGRLLL 111
Query: 117 LELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELID 176
L L+ N+L S + L LG L L+L + + L F L LNLA N L+
Sbjct: 112 LNLASNRL-SALPQE-ALDGLGSLRRLELEGNLLEELRPGTFGALGALATLNLAHNALVY 169
Query: 177 LDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKP 236
L Q LV L LS+ L L+ +A LR L L N L + +AL
Sbjct: 170 LPPMAF--QGLVRARWLQLSHNALS-VLAPEALAGLPALRRLSLHHNELQSLP-GLALSQ 225
Query: 237 LTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYS 296
L RL L + + L+EL + H L + L LD+ +
Sbjct: 226 ARGLARLELGHNPFTYAGEEDGLALPGLRELRLEHGALQALDPRAFAHCPRLHTLDLRGN 285
Query: 297 NLQRISRSTFLKMTSLKTLILSGNKL 322
L + L+ L L GN L
Sbjct: 286 QLDALLPPQ--GPGQLRRLQLQGNPL 309
Score = 173 (66.0 bits), Expect = 7.7e-12, Sum P(2) = 7.7e-12
Identities = 71/236 (30%), Positives = 101/236 (42%)
Query: 143 LDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKG 202
LDLR++ +P F L +L+L + +L+ G L L L LS+ L G
Sbjct: 423 LDLRRNHFPLVPRAAFQGLGRLVSLHLQHCGITELEAGALAG--LGSLIYLYLSDNGLSG 480
Query: 203 PLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFT 262
LS A A +L LYL N AL L L L L++ + RL
Sbjct: 481 -LSATALEGAPRLGYLYLERNRFLQVP-GAALGALPSLFSLHLQDNAVDRLAPGDLAGGR 538
Query: 263 CLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKL 322
L+ L +S N L L P + LE L + + L + + +L L LSGN L
Sbjct: 539 ALRWLYLSGNRLTQVSPGALGPAQELEKLHLDRNQLPEVPTEALEGLPALLELQLSGNPL 598
Query: 323 ETLESGLFQNLTH-LSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLP 377
L+ G F+ + L L LN+ GL +++ F + P L+ L L N L LP
Sbjct: 599 RALQEGAFRPVGRSLQHLFLNSSGLEQISPGAF--SGLGPQLQSLYLQKNQLQALP 652
Score = 167 (63.8 bits), Expect = 2.1e-12, Sum P(3) = 2.1e-12
Identities = 72/226 (31%), Positives = 99/226 (43%)
Query: 100 LTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFA 159
L I P+AF +L +L L+L +++ + LG+L L+L + +S LP
Sbjct: 71 LRVIPPAAFQDLPYLTHLDLRHCQVELVAEGAF--RGLGRLLLLNLASNRLSALPQEALD 128
Query: 160 NNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLY 219
LR L L N L +L T G L L +L+L++ L L AF + R L
Sbjct: 129 GLGSLRRLELEGNLLEELRPGT-FGA-LGALATLNLAHNALVY-LPPMAFQGLVRARWLQ 185
Query: 220 LSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFT 279
LS N LS AL L L RLSL + L LP + L L++ HNP A
Sbjct: 186 LSHNALSVL-APEALAGLPALRRLSLHHNELQSLPGLALSQARGLARLELGHNPFTYAGE 244
Query: 280 ALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETL 325
L L L + + LQ + F L TL L GN+L+ L
Sbjct: 245 EDGLALPGLRELRLEHGALQALDPRAFAHCPRLHTLDLRGNQLDAL 290
Score = 155 (59.6 bits), Expect = 4.1e-11, Sum P(3) = 4.1e-11
Identities = 65/231 (28%), Positives = 98/231 (42%)
Query: 146 RQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLS 205
R ++ +P N T + L+L N L + A Q+L +L LDL +C ++ ++
Sbjct: 46 RHQNLTEVP-NAIPELT--QRLDLRGNVLRVIPPAAF--QDLPYLTHLDLRHCQVE-LVA 99
Query: 206 EDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQ 265
E AF +L L L+ N LSA AL L L RL L L L TF L
Sbjct: 100 EGAFRGLGRLLLLNLASNRLSALPQE-ALDGLGSLRRLELEGNLLEELRPGTFGALGALA 158
Query: 266 ELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETL 325
L+++HN L+ L L + ++ L ++ + +L+ L L N+L++L
Sbjct: 159 TLNLAHNALVYLPPMAFQGLVRARWLQLSHNALSVLAPEALAGLPALRRLSLHHNELQSL 218
Query: 326 ESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVL 376
L+ LEL + T E + P L ELRL L L
Sbjct: 219 PGLALSQARGLARLELGHNPFTYAGE---EDGLALPGLRELRLEHGALQAL 266
Score = 149 (57.5 bits), Expect = 1.9e-10, Sum P(3) = 1.9e-10
Identities = 74/233 (31%), Positives = 91/233 (39%)
Query: 52 LSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNL 111
L I P F +L L LDL + ++ G F L L L L L+ + A D L
Sbjct: 71 LRVIPPAAFQDLPYLTHLDLRHCQVELVAEGAFRGLGRLLLLNLASNRLSALPQEALDGL 130
Query: 112 NHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAE 171
L+ LEL N L+ T G LG L TL+L + + LP F R L L+
Sbjct: 131 GSLRRLELEGNLLEELRPGTF--GALGALATLNLAHNALVYLPPMAFQGLVRARWLQLSH 188
Query: 172 NELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLS 231
N L L G L L L L + L+ L A A L L L NP + A
Sbjct: 189 NALSVLAPEALAG--LPALRRLSLHHNELQS-LPGLALSQARGLARLELGHNPFTYAGEE 245
Query: 232 VALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSP 284
L L L L L + L L F L LD+ N L ALL P
Sbjct: 246 DGLA-LPGLRELRLEHGALQALDPRAFAHCPRLHTLDLRGNQL----DALLPP 293
Score = 143 (55.4 bits), Expect = 8.2e-10, Sum P(3) = 8.2e-10
Identities = 67/246 (27%), Positives = 98/246 (39%)
Query: 185 QNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLS 244
Q+L +L LDL +C ++ ++E AF +L L L+ N LSA AL L L RL
Sbjct: 80 QDLPYLTHLDLRHCQVE-LVAEGAFRGLGRLLLLNLASNRLSALPQE-ALDGLGSLRRLE 137
Query: 245 LRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRS 304
L L L TF L L+++HN L+ L L + ++ L ++
Sbjct: 138 LEGNLLEELRPGTFGALGALATLNLAHNALVYLPPMAFQGLVRARWLQLSHNALSVLAPE 197
Query: 305 TFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLE 364
+ +L+ L L N+L++L L+ LEL + T E + P L
Sbjct: 198 ALAGLPALRRLSLHHNELQSLPGLALSQARGLARLELGHNPFTYAGE---EDGLALPGLR 254
Query: 365 ELRLSGNPLHVLPDSTKQYSMRTIPTQIWKN-FDFLVILFILNETVFHENYTYPDLEELR 423
ELRL L L + R + N D L+ L L+
Sbjct: 255 ELRLEHGALQALDPRAFAHCPRLHTLDLRGNQLDALL-----------PPQGPGQLRRLQ 303
Query: 424 LSGNPL 429
L GNPL
Sbjct: 304 LQGNPL 309
Score = 140 (54.3 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 57/183 (31%), Positives = 83/183 (45%)
Query: 17 PGLITINLNANPIQPVEGAFLVAR-SLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNP 75
P L + L N V GA L A SL L++Q+ + ++ P L L LSGN
Sbjct: 490 PRLGYLYLERNRFLQVPGAALGALPSLFSLHLQDNAVDRLAPGDLAGGRALRWLYLSGNR 549
Query: 76 LRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLG 135
L + PG P LE L L+R L + A + L L L+LS N L++ +
Sbjct: 550 LTQVSPGALGPAQELEKLHLDRNQLPEVPTEALEGLPALLELQLSGNPLRALQEGAF--R 607
Query: 136 NLGK-LDTLDLRQSGISNLPDNVFAN-NTWLRNLNLAENELIDLDVATTLGQNLVHLDSL 193
+G+ L L L SG+ + F+ L++L L +N+L L L Q L+ +
Sbjct: 608 PVGRSLQHLFLNSSGLEQISPGAFSGLGPQLQSLYLQKNQLQALPPLPGLRQ----LELI 663
Query: 194 DLS 196
DLS
Sbjct: 664 DLS 666
Score = 123 (48.4 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 68/242 (28%), Positives = 99/242 (40%)
Query: 193 LDLSNCHLKGPL-SEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLS 251
LDL H PL AF +L +L+L ++ + AL L L L L + GLS
Sbjct: 423 LDLRRNHF--PLVPRAAFQGLGRLVSLHLQHCGITELEAG-ALAGLGSLIYLYLSDNGLS 479
Query: 252 RLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTS 311
L A L L + N + A L L SL L + + + R++ +
Sbjct: 480 GLSATALEGAPRLGYLYLERNRFLQVPGAALGALPSLFSLHLQDNAVDRLAPGDLAGGRA 539
Query: 312 LKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGN 371
L+ L LSGN+L + G L L L+ +L E P L EL+LSGN
Sbjct: 540 LRWLYLSGNRLTQVSPGALGPAQELEKLHLDR---NQLPEVPTEALEGLPALLELQLSGN 596
Query: 372 PLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTYPDLEELRLSGNPLHV 431
PL L + + R++ ++ N L + + F + P L+ L L N L
Sbjct: 597 PLRALQEGAFRPVGRSLQ-HLFLNSSGLEQI---SPGAF--SGLGPQLQSLYLQKNQLQA 650
Query: 432 LP 433
LP
Sbjct: 651 LP 652
Score = 110 (43.8 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 68/258 (26%), Positives = 104/258 (40%)
Query: 19 LITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRI 78
L+ + N P+ P AF L+ L++Q C ++++ L +L L LS N L
Sbjct: 422 LLDLRRNHFPLVP-RAAFQGLGRLVSLHLQHCGITELEAGALAGLGSLIYLYLSDNGLSG 480
Query: 79 IEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLG 138
+ + L YL L R + +A L L +L L N + L G
Sbjct: 481 LSATALEGAPRLGYLYLERNRFLQVPGAALGALPSLFSLHLQDNAVDRLAPGDLAGGRA- 539
Query: 139 KLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNC 198
L L L + ++ + L L+L N+L + V T + L L L LS
Sbjct: 540 -LRWLYLSGNRLTQVSPGALGPAQELEKLHLDRNQLPE--VPTEALEGLPALLELQLSGN 596
Query: 199 HLKGPLSEDAFVNATK-LRTLYLSGNPLSAADLSV--ALKPLTKLHRLSLRNCGLSRLPA 255
L+ L E AF + L+ L+L+ + L L P +L L L+ L LP
Sbjct: 597 PLRA-LQEGAFRPVGRSLQHLFLNSSGLEQISPGAFSGLGP--QLQSLYLQKNQLQALPP 653
Query: 256 NTFHRFTCLQELDISHNP 273
R L+ +D+S NP
Sbjct: 654 LPGLRQ--LELIDLSGNP 669
Score = 106 (42.4 bits), Expect = 7.0e-06, Sum P(3) = 7.0e-06
Identities = 47/160 (29%), Positives = 66/160 (41%)
Query: 218 LYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDA 277
L L GN L A + L L L LR+C + + F L L+++ N L
Sbjct: 64 LDLRGNVLRVIP-PAAFQDLPYLTHLDLRHCQVELVAEGAFRGLGRLLLLNLASNRLSAL 122
Query: 278 FTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLS 337
L L SL L++ + L+ + TF + +L TL L+ N L L FQ L
Sbjct: 123 PQEALDGLGSLRRLELEGNLLEELRPGTFGALGALATLNLAHNALVYLPPMAFQGLVRAR 182
Query: 338 VLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLP 377
L+L++ L+ L P L L L N L LP
Sbjct: 183 WLQLSHNALSVLAPEALAG---LPALRRLSLHHNELQSLP 219
Score = 104 (41.7 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 77/276 (27%), Positives = 111/276 (40%)
Query: 105 PSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWL 164
P F N L L+L +N + G LG+L +L L+ GI+ L A L
Sbjct: 413 PRGFPNDTQL--LDLRRNHFPL-VPRAAFQG-LGRLVSLHLQHCGITELEAGALAGLGSL 468
Query: 165 RNLNLAENELIDLDVATTLGQNLVHLDSLDLS-NCHLKGPLSEDAFVNATKLRTLYLSGN 223
L L++N L L AT L + L L L N L+ P + A L +L+L N
Sbjct: 469 IYLYLSDNGLSGLS-ATAL-EGAPRLGYLYLERNRFLQVPGA--ALGALPSLFSLHLQDN 524
Query: 224 P---LSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTA 280
L+ DL+ L L L L+++ L++L + N L + T
Sbjct: 525 AVDRLAPGDLAGG----RALRWLYLSGNRLTQVSPGALGPAQELEKLHLDRNQLPEVPTE 580
Query: 281 LLSPLESLEHLDMGYSNLQRISRSTFLKM-TSLKTLILSGNKLETLESGLFQNL-THLSV 338
L L +L L + + L+ + F + SL+ L L+ + LE + G F L L
Sbjct: 581 ALEGLPALLELQLSGNPLRALQEGAFRPVGRSLQHLFLNSSGLEQISPGAFSGLGPQLQS 640
Query: 339 LELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLH 374
L L L L LE + LSGNP H
Sbjct: 641 LYLQKNQLQALPPLP-----GLRQLELIDLSGNPFH 671
Score = 94 (38.1 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 44/148 (29%), Positives = 61/148 (41%)
Query: 233 ALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLD 292
A+ LT+ RL LR L +P F L LD+ H + L L L+
Sbjct: 56 AIPELTQ--RLDLRGNVLRVIPPAAFQDLPYLTHLDLRHCQVELVAEGAFRGLGRLLLLN 113
Query: 293 MGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNET 352
+ + L + + + SL+ L L GN LE L G F L L+ L L + L L
Sbjct: 114 LASNRLSALPQEALDGLGSLRRLELEGNLLEELRPGTFGALGALATLNLAHNALVYLPPM 173
Query: 353 VFHENYTYPDLEELRLSGNPLHVL-PDS 379
F L+LS N L VL P++
Sbjct: 174 AFQGLVR---ARWLQLSHNALSVLAPEA 198
Score = 72 (30.4 bits), Expect = 3.6e-13, Sum P(3) = 3.6e-13
Identities = 18/61 (29%), Positives = 27/61 (44%)
Query: 518 RAITSIKLVGNPWKCDCNIADMWEWATREKGDIGVLVGSTTPTEIGFGASRKKKGLVCYF 577
R + I L GNP+ CDC + + W T + + VG+T T ++ K F
Sbjct: 658 RQLELIDLSGNPFHCDCQLLPLHRWLT----GLNLRVGATCATPPS-ARGQRVKAAAAVF 712
Query: 578 D 578
D
Sbjct: 713 D 713
Score = 55 (24.4 bits), Expect = 3.6e-13, Sum P(3) = 3.6e-13
Identities = 12/19 (63%), Positives = 13/19 (68%)
Query: 417 PDLEELRLSGNPLHVLPTG 435
P L EL+LSGNPL L G
Sbjct: 586 PALLELQLSGNPLRALQEG 604
Score = 54 (24.1 bits), Expect = 4.4e-10, Sum P(2) = 4.4e-10
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 523 IKLVGNPWKCDCNIADMWEWATREK 547
++L GNP C C + EW R +
Sbjct: 302 LQLQGNPLWCGCRARPLLEWLARAR 326
Score = 51 (23.0 bits), Expect = 9.3e-13, Sum P(3) = 9.3e-13
Identities = 38/157 (24%), Positives = 60/157 (38%)
Query: 291 LDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLN 350
LD+ ++ + R+ F + L +L L + LE+G L L L L++ GL+ L+
Sbjct: 423 LDLRRNHFPLVPRAAFQGLGRLVSLHLQHCGITELEAGALAGLGSLIYLYLSDNGLSGLS 482
Query: 351 ETVFHE----NYTYPDLEE-LRLSGNPLHVLPDSTKQYSM-----RTIPTQIWKNFDFLV 400
T Y Y + L++ G L LP + R P +
Sbjct: 483 ATALEGAPRLGYLYLERNRFLQVPGAALGALPSLFSLHLQDNAVDRLAPGDLAGGRALRW 542
Query: 401 ILFILNE-TVFHENYTYP--DLEELRLSGNPLHVLPT 434
+ N T P +LE+L L N L +PT
Sbjct: 543 LYLSGNRLTQVSPGALGPAQELEKLHLDRNQLPEVPT 579
>WB|WBGene00006593 [details] [associations]
symbol:tol-1 species:6239 "Caenorhabditis elegans"
[GO:0005622 "intracellular" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0007166 "cell
surface receptor signaling pathway" evidence=TAS] [GO:0009790
"embryo development" evidence=IMP] [GO:0006952 "defense response"
evidence=IMP] [GO:0005623 "cell" evidence=IDA] [GO:0030424 "axon"
evidence=ND] [GO:0005057 "receptor signaling protein activity"
evidence=ISS] InterPro:IPR000157 InterPro:IPR001611 Pfam:PF01582
PROSITE:PS50104 PROSITE:PS51450 GO:GO:0009792 GO:GO:0040007
GO:GO:0006952 GO:GO:0002119 GO:GO:0010171 GO:GO:0005622
GO:GO:0005623 GO:GO:0007166 GO:GO:0005057
GeneTree:ENSGT00700000104286 SUPFAM:SSF52200 HSSP:O60603
EMBL:FO080418 RefSeq:NP_001020983.1 ProteinModelPortal:Q9N5Z3
SMR:Q9N5Z3 DIP:DIP-24325N IntAct:Q9N5Z3 MINT:MINT-1108170
EnsemblMetazoa:C07F11.1 GeneID:171635 KEGG:cel:CELE_C07F11.1
UCSC:C07F11.1 CTD:171635 WormBase:C07F11.1 InParanoid:Q9N5Z3
OMA:NPYLVEI NextBio:872085 ArrayExpress:Q9N5Z3 Uniprot:Q9N5Z3
Length = 1221
Score = 203 (76.5 bits), Expect = 3.7e-13, Sum P(3) = 3.7e-13
Identities = 103/372 (27%), Positives = 164/372 (44%)
Query: 27 NPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGV-FD 85
+P+QP L S + T++ I + + + L +S + P F
Sbjct: 37 DPVQPTSKLLLCDYS-----SKNTTITPIASSNYDQVANIRSLFISCDNNNFQFPDAYFK 91
Query: 86 PLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQ-NKLKSHIDWTL-VLGNLGKLDTL 143
LT+L +L + C T+ S F++L L+ LEL Q + + + T VL L +L+
Sbjct: 92 SLTALHHLRIVGCETTHFSVKLFEDLAALRRLELDQISTASTSFEMTEDVLMPLARLEKF 151
Query: 144 DLRQSGISNLPDNVFANNTWLRNLNLAENELIDLD-VATTLGQNLVHLD-SLD-LSNCH- 199
L +S LP + + L+ LN++ NEL L + + Q L+ +D S + L+N
Sbjct: 152 SLTRSRNIELPQRLLCSLPHLQVLNISSNELPSLRREESCVAQQLLIVDLSRNRLTNIEQ 211
Query: 200 -LKG-PLSEDAFVNATKLRTLYLS-GNP----LSA-ADLSVALKPL--TKLHRLSLRNCG 249
L+G P V + L LS P L A A+ V L L T +H ++L
Sbjct: 212 FLRGIPAIRQISVAYNSIAELDLSLATPFLQQLDAEANRIVDLTSLPGTVVH-VNLAGNA 270
Query: 250 LSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKM 309
L R+P + L L++S N + +++ S E LE LD Y+ L + K
Sbjct: 271 LKRVP-DAVAELASLVALNVSRNEIEAGNSSVFSSPE-LEMLDASYNKLDSLPVEWLQKC 328
Query: 310 TS-LKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRL 368
+ L L N +E L G+ N T+L L+L++ L + V EN + LRL
Sbjct: 329 EKRIAHLHLEHNSIEQLTGGVLANATNLQTLDLSSNQLRVFRDEVLPEN---SKIGNLRL 385
Query: 369 SGNPLHVLPDST 380
S N L +L S+
Sbjct: 386 SNNSLELLEPSS 397
Score = 196 (74.1 bits), Expect = 2.1e-12, Sum P(3) = 2.1e-12
Identities = 84/330 (25%), Positives = 149/330 (45%)
Query: 16 NPGLITINLNANPIQ--PVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSG 73
+P L ++ + N + PVE + + +L+++ ++ ++ N T L LDLS
Sbjct: 304 SPELEMLDASYNKLDSLPVEWLQKCEKRIAHLHLEHNSIEQLTGGVLANATNLQTLDLSS 363
Query: 74 NPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLV 133
N LR+ V + + L L+ +L + PS+ L L++L+LS NKL +
Sbjct: 364 NQLRVFRDEVLPENSKIGNLRLSNNSLELLEPSSLSGLK-LESLDLSHNKLT---EVPAA 419
Query: 134 LGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSL 193
+G + +L +DL + I+ + V L ++L+ N+L + + + L SL
Sbjct: 420 IGKVEQLKKVDLSHNRIAKVYQYVLNKIKQLHTVDLSNNQL--QSIGPYIFSDSSELHSL 477
Query: 194 DLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAAD--LSVA--LKPLTKLHR------- 242
D+SN + L +DAF KLR + + N + + D L+ A L+ L H
Sbjct: 478 DVSNNEIS-LLFKDAFARCPKLRKISMKMNKIKSLDEGLTEASGLRRLDVSHNEILVLKW 536
Query: 243 ---------LSLRNCGLSRLPANTFHRFTC-LQELDISHNPLIDAFTALLSPLESLEHLD 292
L+ N ++ L A + T L+ + +S+N I A P SLE LD
Sbjct: 537 SALPENLEILNADNNDINLLTAASMSPSTANLKSVSLSNNG-ITIMNADQIP-NSLESLD 594
Query: 293 MGYSNLQRISRSTFLKMTSLKTLILSGNKL 322
+ + L ++ ++ + L+ L L GN L
Sbjct: 595 VSNNRLAKLGKTALAAKSQLRRLNLKGNLL 624
Score = 162 (62.1 bits), Expect = 9.0e-09, Sum P(3) = 9.0e-09
Identities = 88/379 (23%), Positives = 167/379 (44%)
Query: 17 PGLITINLNANPIQPVEGA-FLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNP 75
P L +N+++N + + VA+ LL + + L+ I QF + + ++ ++ N
Sbjct: 170 PHLQVLNISSNELPSLRREESCVAQQLLIVDLSRNRLTNIE-QFLRGIPAIRQISVAYNS 228
Query: 76 LRIIEPGVFDP--------------LTSLE--YLMLNRC-NLTYISPSAFDNLNHLKTLE 118
+ ++ + P LTSL + +N N P A L L L
Sbjct: 229 IAELDLSLATPFLQQLDAEANRIVDLTSLPGTVVHVNLAGNALKRVPDAVAELASLVALN 288
Query: 119 LSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFAN-NTWLRNLNLAENELIDL 177
+S+N++++ + V + +L+ LD + + +LP + +L+L N + L
Sbjct: 289 VSRNEIEAGN--SSVFSS-PELEMLDASYNKLDSLPVEWLQKCEKRIAHLHLEHNSIEQL 345
Query: 178 DVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPL 237
L N +L +LDLS+ L+ ++ +K+ L LS N L + S +L L
Sbjct: 346 -TGGVLA-NATNLQTLDLSSNQLR-VFRDEVLPENSKIGNLRLSNNSLELLEPS-SLSGL 401
Query: 238 TKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSN 297
KL L L + L+ +PA + L+++D+SHN + + +L+ ++ L +D+ +
Sbjct: 402 -KLESLDLSHNKLTEVPA-AIGKVEQLKKVDLSHNRIAKVYQYVLNKIKQLHTVDLSNNQ 459
Query: 298 LQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHEN 357
LQ I F + L +L +S N++ L F L + + + L+E + +
Sbjct: 460 LQSIGPYIFSDSSELHSLDVSNNEISLLFKDAFARCPKLRKISMKMNKIKSLDEGLTEAS 519
Query: 358 YTYPDLEELRLSGNPLHVL 376
L L +S N + VL
Sbjct: 520 ----GLRRLDVSHNEILVL 534
Score = 158 (60.7 bits), Expect = 2.4e-08, Sum P(3) = 2.4e-08
Identities = 68/259 (26%), Positives = 121/259 (46%)
Query: 19 LITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRI 78
L +++L+ N + V A L + + ++K+ + L+ +DLS N L+
Sbjct: 403 LESLDLSHNKLTEVPAAIGKVEQLKKVDLSHNRIAKVYQYVLNKIKQLHTVDLSNNQLQS 462
Query: 79 IEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLG 138
I P +F + L L ++ ++ + AF L+ + + NK+KS +D L + G
Sbjct: 463 IGPYIFSDSSELHSLDVSNNEISLLFKDAFARCPKLRKISMKMNKIKS-LDEGLTEAS-G 520
Query: 139 KLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNC 198
L LD+ + I L + N L LN A+N I+L A ++ + +L S+ LSN
Sbjct: 521 -LRRLDVSHNEILVLKWSALPEN--LEILN-ADNNDINLLTAASMSPSTANLKSVSLSNN 576
Query: 199 HLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTF 258
+ ++ D N+ L +L +S N L+ AL ++L RL+L+ L+ + +
Sbjct: 577 GIT-IMNADQIPNS--LESLDVSNNRLAKLG-KTALAAKSQLRRLNLKGNLLTVVATESM 632
Query: 259 HRFTCLQEL--DISHNPLI 275
+ L +IS NPLI
Sbjct: 633 KVVEAVHPLKVEISENPLI 651
Score = 127 (49.8 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 73/315 (23%), Positives = 131/315 (41%)
Query: 65 TLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLN--HLKTLELSQN 122
+L LD+S N L + + L L L LT ++ + + H +E+S+N
Sbjct: 589 SLESLDVSNNRLAKLGKTALAAKSQLRRLNLKGNLLTVVATESMKVVEAVHPLKVEISEN 648
Query: 123 KL--KSHIDWTLVLGNLGKLDTLDLRQSGISNLPDN--VFANNTWLRNLNLAENELIDLD 178
L + W ++ G K+ D + S+ D + + ++L + + +
Sbjct: 649 PLICDCQMGW-MIGGAKPKVLIQDSETASCSHAVDGHQIQIQSLSKKDLLCPYKSVCEPE 707
Query: 179 VATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLT 238
N S+ +NC +D F N +R + + + + + V+ P++
Sbjct: 708 CICCQYGNC-DCKSVCPANCRC---FRDDQF-NINIVRC-HGNSSMVPKREFVVSELPVS 761
Query: 239 KLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNL 298
+ L L +L ++F LQ L I+ L L +L+ LD+ ++L
Sbjct: 762 ATE-IILSGVTLPQLRTHSFIGRLRLQRLHINGTGLRSIQPKAFHTLPALKTLDLSDNSL 820
Query: 299 QRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENY 358
+S FLK + L L+GN+ TL G+F+ L +L L L+N L + + V H
Sbjct: 821 ISLSGEEFLKCGEVSQLFLNGNRFSTLSRGIFEKLPNLKYLTLHNNSLEDIPQ-VLHSTA 879
Query: 359 TYPDLEELRLSGNPL 373
L ++ LS NPL
Sbjct: 880 ----LSKISLSSNPL 890
Score = 64 (27.6 bits), Expect = 3.7e-13, Sum P(3) = 3.7e-13
Identities = 12/25 (48%), Positives = 17/25 (68%)
Query: 511 PTVLRHNRAITSIKLVGNPWKCDCN 535
P VL H+ A++ I L NP +CDC+
Sbjct: 872 PQVL-HSTALSKISLSSNPLRCDCS 895
Score = 40 (19.1 bits), Expect = 3.7e-13, Sum P(3) = 3.7e-13
Identities = 18/66 (27%), Positives = 25/66 (37%)
Query: 414 YTYPDLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLN 473
+T P L+ L LS N L L +G + L +F N+ L
Sbjct: 805 HTLPALKTLDLSDNSLISL-SGEEFLKCGEVSQLFLNGN-RFSTLSRGIFEKLPNLKYLT 862
Query: 474 LANNNL 479
L NN+L
Sbjct: 863 LHNNSL 868
Score = 37 (18.1 bits), Expect = 7.5e-13, Sum P(3) = 7.5e-13
Identities = 8/28 (28%), Positives = 18/28 (64%)
Query: 458 LPPNVFNNTRNITSLNLANNNL-SMTSE 484
+ P F+ + +L+L++N+L S++ E
Sbjct: 799 IQPKAFHTLPALKTLDLSDNSLISLSGE 826
>ZFIN|ZDB-GENE-091116-44 [details] [associations]
symbol:lrrc4bb "leucine rich repeat containing 4Bb"
species:7955 "Danio rerio" [GO:0051965 "positive regulation of
synapse assembly" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR007110 InterPro:IPR026883 PROSITE:PS50835
PROSITE:PS51450 ZFIN:ZDB-GENE-091116-44 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GeneTree:ENSGT00690000101682
PANTHER:PTHR24369:SF7 EMBL:CU672238 EMBL:CU681836 IPI:IPI00961430
Ensembl:ENSDART00000007208 Uniprot:E7F2A9
Length = 745
Score = 218 (81.8 bits), Expect = 3.9e-13, Sum P(2) = 3.9e-13
Identities = 76/249 (30%), Positives = 117/249 (46%)
Query: 50 CTLSKIN--PQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSA 107
CT +N PQ ++ T L+L N +++I F L LE L L++ + I A
Sbjct: 73 CTKKSLNEVPQSISSNTRY--LNLQENSIQVIRSDTFKHLNHLEILQLSKNQIRQIEVGA 130
Query: 108 FDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNL 167
F+ L +L TLEL N+L + + L KL L LR + I LP F LR L
Sbjct: 131 FNGLPNLITLELFDNRLP--LVPSQAFEYLSKLRELWLRNNPIETLPAYAFHRVPSLRRL 188
Query: 168 NLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSA 227
+L E + ++ + L++L L+L C LK + V +L L LSGN L
Sbjct: 189 DLGELRKLSF-ISEAAFEGLLNLRFLNLGMCGLKDVPNLTPLV---RLEELELSGNQLGV 244
Query: 228 ADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLES 287
+ + L L +L L + +S + N F L+EL++SHN L L +PL+
Sbjct: 245 VRPG-SFQGLVSLRKLWLMHSRISVIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLQQ 303
Query: 288 LEHLDMGYS 296
LE + + ++
Sbjct: 304 LERVHLNHN 312
Score = 193 (73.0 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 71/239 (29%), Positives = 115/239 (48%)
Query: 38 VARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNR 97
++ + YL +QE ++ I F +L L L LS N +R IE G F+ L +L L L
Sbjct: 85 ISSNTRYLNLQENSIQVIRSDTFKHLNHLEILQLSKNQIRQIEVGAFNGLPNLITLELFD 144
Query: 98 CNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLV-LGNLGKLDTLDLRQSGISNLPDN 156
L + AF+ L+ L+ L L N +++ + + +L +LD +LR+ +S + +
Sbjct: 145 NRLPLVPSQAFEYLSKLRELWLRNNPIETLPAYAFHRVPSLRRLDLGELRK--LSFISEA 202
Query: 157 VFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLR 216
F LR LNL L D+ T L V L+ L+LS L G + +F LR
Sbjct: 203 AFEGLLNLRFLNLGMCGLKDVPNLTPL----VRLEELELSGNQL-GVVRPGSFQGLVSLR 257
Query: 217 TLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLI 275
L+L + +S + + A L L L+L + L LP + F L+ + ++HNP +
Sbjct: 258 KLWLMHSRISVIERN-AFDDLKNLEELNLSHNSLHSLPHDLFTPLQQLERVHLNHNPWV 315
Score = 161 (61.7 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 65/233 (27%), Positives = 111/233 (47%)
Query: 143 LDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKG 202
L+L+++ I + + F + L L L++N++ ++V G L +L +L+L + L
Sbjct: 92 LNLQENSIQVIRSDTFKHLNHLEILQLSKNQIRQIEVGAFNG--LPNLITLELFDNRL-- 147
Query: 203 PL-SEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCG-LSRLPANTFHR 260
PL AF +KLR L+L NP+ + A + L RL L LS + F
Sbjct: 148 PLVPSQAFEYLSKLRELWLRNNPIETLP-AYAFHRVPSLRRLDLGELRKLSFISEAAFEG 206
Query: 261 FTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGN 320
L+ L++ L D L+PL LE L++ + L + +F + SL+ L L +
Sbjct: 207 LLNLRFLNLGMCGLKDVPN--LTPLVRLEELELSGNQLGVVRPGSFQGLVSLRKLWLMHS 264
Query: 321 KLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYT-YPDLEELRLSGNP 372
++ +E F +L +L L L++ L L H+ +T LE + L+ NP
Sbjct: 265 RISVIERNAFDDLKNLEELNLSHNSLHSLP----HDLFTPLQQLERVHLNHNP 313
Score = 143 (55.4 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 37/94 (39%), Positives = 51/94 (54%)
Query: 33 EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEY 92
E AF +L +L + C L + P T L L +L+LSGN L ++ PG F L SL
Sbjct: 201 EAAFEGLLNLRFLNLGMCGLKDV-PNL-TPLVRLEELELSGNQLGVVRPGSFQGLVSLRK 258
Query: 93 LMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKS 126
L L ++ I +AFD+L +L+ L LS N L S
Sbjct: 259 LWLMHSRISVIERNAFDDLKNLEELNLSHNSLHS 292
Score = 37 (18.1 bits), Expect = 3.9e-13, Sum P(2) = 3.9e-13
Identities = 11/37 (29%), Positives = 16/37 (43%)
Query: 548 GDIGVLVGSTTPTEIGFGASRKKKGLVCYFDIFTTPT 584
G G+ GST T G G + + +I T P+
Sbjct: 602 GASGITGGSTVHTGAGTGGGSGQSPRIHDPEIMTLPS 638
>UNIPROTKB|J3KS54 [details] [associations]
symbol:FLII "Protein flightless-1 homolog" species:9606
"Homo sapiens" [GO:0003779 "actin binding" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007122 PRINTS:PR00597
PROSITE:PS51450 SMART:SM00262 InterPro:IPR003591 SMART:SM00369
InterPro:IPR007123 PANTHER:PTHR11977 Pfam:PF00626
InterPro:IPR025875 Pfam:PF12799 EMBL:AC127537 HGNC:HGNC:3750
ChiTaRS:FLII ProteinModelPortal:J3KS54 Ensembl:ENST00000578558
Uniprot:J3KS54
Length = 700
Score = 207 (77.9 bits), Expect = 4.1e-13, P = 4.1e-13
Identities = 95/343 (27%), Positives = 158/343 (46%)
Query: 41 SLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNL 100
SL +L + L + P+ L L L +S N L + G L SL ++ +L
Sbjct: 34 SLRWLKLNRTGLCYL-PEELAALQKLEHLSVSHNNLTTLH-GELSSLPSLRAIVARANSL 91
Query: 101 TYIS-PSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFA 159
P L+ L L+LS N+L + L N + L+L + I +P+ +F
Sbjct: 92 KNSGVPDDIFKLDDLSVLDLSHNQLT---ECPRELENAKNMLVLNLSHNSIDTIPNQLFI 148
Query: 160 NNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLS-NCHLKGPLSEDAFVNATKLRTL 218
N T L L+L+EN L L + LVHL +L L+ N L L + T L+TL
Sbjct: 149 NLTDLLYLDLSENRLESLPPQM---RRLVHLQTLVLNGNPLLHAQLRQ--LPAMTALQTL 203
Query: 219 YLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAF 278
+L + ++L +L+ L+ L + L L+R+P + L+ L++S N + +
Sbjct: 204 HLRSTQRTQSNLPTSLEGLSNLADVDLSCNDLTRVP-ECLYTLPSLRRLNLSSNQITE-L 261
Query: 279 TALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLET--LESGLFQNLTHL 336
+ + +E L++ + L + S K++ LK L L+ NKL+ L SG+ + LT+L
Sbjct: 262 SLCIDQWVHVETLNLSRNQLTSLP-SAICKLSKLKKLYLNSNKLDFDGLPSGIGK-LTNL 319
Query: 337 SVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDS 379
N L + E++ P L +L L+ N L LP++
Sbjct: 320 EEFMAANNNLELVPESLCR----CPKLRKLVLNKNHLVTLPEA 358
Score = 199 (75.1 bits), Expect = 3.0e-12, P = 3.0e-12
Identities = 80/286 (27%), Positives = 137/286 (47%)
Query: 7 VYNDRRNLDNPGLITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTL 66
V +D LD+ L ++L+ N + A+++L L + ++ I Q F NLT L
Sbjct: 96 VPDDIFKLDD--LSVLDLSHNQLTECPRELENAKNMLVLNLSHNSIDTIPNQLFINLTDL 153
Query: 67 NKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLEL-SQNKLK 125
LDLS N L + P + L L+ L+LN L + + L+TL L S + +
Sbjct: 154 LYLDLSENRLESLPPQM-RRLVHLQTLVLNGNPLLHAQLRQLPAMTALQTLHLRSTQRTQ 212
Query: 126 SHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQ 185
S++ +L L L +DL + ++ +P+ ++ + LR LNL+ N++ +L +
Sbjct: 213 SNLPTSLE--GLSNLADVDLSCNDLTRVPECLYTLPS-LRRLNLSSNQITELSLCI---D 266
Query: 186 NLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSL 245
VH+++L+LS L S A +KL+ LYL+ N L L + LT L
Sbjct: 267 QWVHVETLNLSRNQLTSLPS--AICKLSKLKKLYLNSNKLDFDGLPSGIGKLTNLEEFMA 324
Query: 246 RNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTAL--LSPLESLE 289
N L +P + R L++L ++ N L+ A+ L+ +E L+
Sbjct: 325 ANNNLELVP-ESLCRCPKLRKLVLNKNHLVTLPEAIHFLTEIEVLD 369
Score = 176 (67.0 bits), Expect = 9.6e-10, P = 9.6e-10
Identities = 84/310 (27%), Positives = 137/310 (44%)
Query: 69 LDLSGNPLRI-IEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKS- 126
+DLSGN + P +TSL +L LNR L Y+ P L L+ L +S N L +
Sbjct: 13 VDLSGNDFKGGYFPENVKAMTSLRWLKLNRTGLCYL-PEELAALQKLEHLSVSHNNLTTL 71
Query: 127 HIDWTLVLGNLGKLDTLDLRQSGISN--LPDNVFANNTWLRNLNLAENELIDLDVATTLG 184
H + L +L L + R + + N +PD++F + L L+L+ N+L +
Sbjct: 72 HGE----LSSLPSLRAIVARANSLKNSGVPDDIFKLDD-LSVLDLSHNQLTECPRELENA 126
Query: 185 QNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLS 244
+N++ L+LS+ + + F+N T L L LS N L + L ++ L L L
Sbjct: 127 KNML---VLNLSHNSID-TIPNQLFINLTDLLYLDLSENRLES--LPPQMRRLVHLQTLV 180
Query: 245 LRNCGLSRLPANTFHRFTCLQELDISHNPLIDA-FTALLSPLESLEHLDMGYSNLQRISR 303
L L T LQ L + + L L +L +D+ ++L R+
Sbjct: 181 LNGNPLLHAQLRQLPAMTALQTLHLRSTQRTQSNLPTSLEGLSNLADVDLSCNDLTRVPE 240
Query: 304 STFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDL 363
+ + SL+ L LS N++ L + Q H+ L L+ LT L + + L
Sbjct: 241 CLYT-LPSLRRLNLSSNQITELSLCIDQ-WVHVETLNLSRNQLTSLPSAICKLS----KL 294
Query: 364 EELRLSGNPL 373
++L L+ N L
Sbjct: 295 KKLYLNSNKL 304
Score = 164 (62.8 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 81/322 (25%), Positives = 146/322 (45%)
Query: 22 INLNANPIQPVEGAFLVARSLLYLYMQECTLSKIN-PQFFTNLTTLNKLDLSGNPLRIIE 80
++++ N + + G SL + + +L P L L+ LDLS N L
Sbjct: 61 LSVSHNNLTTLHGELSSLPSLRAIVARANSLKNSGVPDDIFKLDDLSVLDLSHNQLTEC- 119
Query: 81 PGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKL 140
P + ++ L L+ ++ I F NL L L+LS+N+L+S + L L
Sbjct: 120 PRELENAKNMLVLNLSHNSIDTIPNQLFINLTDLLYLDLSENRLES---LPPQMRRLVHL 176
Query: 141 DTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHL 200
TL L + + + T L+ L+L + ++ T+L + L +L +DLS C+
Sbjct: 177 QTLVLNGNPLLHAQLRQLPAMTALQTLHLRSTQRTQSNLPTSL-EGLSNLADVDLS-CND 234
Query: 201 KGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHR 260
+ E + LR L LS N ++ +LS+ + + L+L L+ LP+ +
Sbjct: 235 LTRVPECLYT-LPSLRRLNLSSNQIT--ELSLCIDQWVHVETLNLSRNQLTSLPS-AICK 290
Query: 261 FTCLQELDISHNPL-IDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSG 319
+ L++L ++ N L D + + L +LE +NL+ + S + L+ L+L+
Sbjct: 291 LSKLKKLYLNSNKLDFDGLPSGIGKLTNLEEFMAANNNLELVPES-LCRCPKLRKLVLNK 349
Query: 320 NKLETLESGLFQNLTHLSVLEL 341
N L TL + LT + VL++
Sbjct: 350 NHLVTLPEAI-HFLTEIEVLDV 370
>UNIPROTKB|J3QLG3 [details] [associations]
symbol:FLII "Protein flightless-1 homolog" species:9606
"Homo sapiens" [GO:0003779 "actin binding" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007122 PRINTS:PR00597
PROSITE:PS51450 SMART:SM00262 InterPro:IPR003591 SMART:SM00369
InterPro:IPR007123 PANTHER:PTHR11977 Pfam:PF00626
InterPro:IPR025875 Pfam:PF12799 CTD:2314 EMBL:AC127537
RefSeq:NP_001243193.1 UniGene:Hs.513984 GeneID:2314 KEGG:hsa:2314
HGNC:HGNC:3750 ChiTaRS:FLII ProteinModelPortal:J3QLG3
Ensembl:ENST00000579294 Uniprot:J3QLG3
Length = 1258
Score = 210 (79.0 bits), Expect = 4.5e-13, P = 4.5e-13
Identities = 98/360 (27%), Positives = 164/360 (45%)
Query: 29 IQPVEGAFL-----VARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGV 83
++PV G + SL +L + L + P+ L L L +S N L + G
Sbjct: 6 LRPVPGGYFPENVKAMTSLRWLKLNRTGLCYL-PEELAALQKLEHLSVSHNNLTTLH-GE 63
Query: 84 FDPLTSLEYLMLNRCNLTYIS-PSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDT 142
L SL ++ +L P L+ L L+LS N+L + L N +
Sbjct: 64 LSSLPSLRAIVARANSLKNSGVPDDIFKLDDLSVLDLSHNQLT---ECPRELENAKNMLV 120
Query: 143 LDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLS-NCHLK 201
L+L + I +P+ +F N T L L+L+EN L L + LVHL +L L+ N L
Sbjct: 121 LNLSHNSIDTIPNQLFINLTDLLYLDLSENRLESLPPQM---RRLVHLQTLVLNGNPLLH 177
Query: 202 GPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRF 261
L + T L+TL+L + ++L +L+ L+ L + L L+R+P +
Sbjct: 178 AQLRQ--LPAMTALQTLHLRSTQRTQSNLPTSLEGLSNLADVDLSCNDLTRVP-ECLYTL 234
Query: 262 TCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNK 321
L+ L++S N + + + + +E L++ + L + S K++ LK L L+ NK
Sbjct: 235 PSLRRLNLSSNQITE-LSLCIDQWVHVETLNLSRNQLTSLP-SAICKLSKLKKLYLNSNK 292
Query: 322 LET--LESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDS 379
L+ L SG+ + LT+L N L + E++ P L +L L+ N L LP++
Sbjct: 293 LDFDGLPSGIGK-LTNLEEFMAANNNLELVPESLCR----CPKLRKLVLNKNHLVTLPEA 347
Score = 199 (75.1 bits), Expect = 7.0e-12, P = 7.0e-12
Identities = 80/286 (27%), Positives = 137/286 (47%)
Query: 7 VYNDRRNLDNPGLITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTL 66
V +D LD+ L ++L+ N + A+++L L + ++ I Q F NLT L
Sbjct: 85 VPDDIFKLDD--LSVLDLSHNQLTECPRELENAKNMLVLNLSHNSIDTIPNQLFINLTDL 142
Query: 67 NKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLEL-SQNKLK 125
LDLS N L + P + L L+ L+LN L + + L+TL L S + +
Sbjct: 143 LYLDLSENRLESLPPQM-RRLVHLQTLVLNGNPLLHAQLRQLPAMTALQTLHLRSTQRTQ 201
Query: 126 SHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQ 185
S++ +L L L +DL + ++ +P+ ++ + LR LNL+ N++ +L +
Sbjct: 202 SNLPTSLE--GLSNLADVDLSCNDLTRVPECLYTLPS-LRRLNLSSNQITELSLCI---D 255
Query: 186 NLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSL 245
VH+++L+LS L S A +KL+ LYL+ N L L + LT L
Sbjct: 256 QWVHVETLNLSRNQLTSLPS--AICKLSKLKKLYLNSNKLDFDGLPSGIGKLTNLEEFMA 313
Query: 246 RNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTAL--LSPLESLE 289
N L +P + R L++L ++ N L+ A+ L+ +E L+
Sbjct: 314 ANNNLELVP-ESLCRCPKLRKLVLNKNHLVTLPEAIHFLTEIEVLD 358
Score = 172 (65.6 bits), Expect = 5.7e-09, P = 5.7e-09
Identities = 85/313 (27%), Positives = 138/313 (44%)
Query: 69 LDLSGNPLRIIEPGVFDP----LTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKL 124
+DL G LR + G F +TSL +L LNR L Y+ P L L+ L +S N L
Sbjct: 1 MDLRG--LRPVPGGYFPENVKAMTSLRWLKLNRTGLCYL-PEELAALQKLEHLSVSHNNL 57
Query: 125 KS-HIDWTLVLGNLGKLDTLDLRQSGISN--LPDNVFANNTWLRNLNLAENELIDLDVAT 181
+ H + L +L L + R + + N +PD++F + L L+L+ N+L +
Sbjct: 58 TTLHGE----LSSLPSLRAIVARANSLKNSGVPDDIFKLDD-LSVLDLSHNQLTECPREL 112
Query: 182 TLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLH 241
+N++ L+LS+ + + F+N T L L LS N L + L ++ L L
Sbjct: 113 ENAKNML---VLNLSHNSID-TIPNQLFINLTDLLYLDLSENRLES--LPPQMRRLVHLQ 166
Query: 242 RLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDA-FTALLSPLESLEHLDMGYSNLQR 300
L L L T LQ L + + L L +L +D+ ++L R
Sbjct: 167 TLVLNGNPLLHAQLRQLPAMTALQTLHLRSTQRTQSNLPTSLEGLSNLADVDLSCNDLTR 226
Query: 301 ISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTY 360
+ + + SL+ L LS N++ L + Q H+ L L+ LT L + +
Sbjct: 227 VPECLYT-LPSLRRLNLSSNQITELSLCIDQ-WVHVETLNLSRNQLTSLPSAICKLS--- 281
Query: 361 PDLEELRLSGNPL 373
L++L L+ N L
Sbjct: 282 -KLKKLYLNSNKL 293
Score = 164 (62.8 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 81/322 (25%), Positives = 146/322 (45%)
Query: 22 INLNANPIQPVEGAFLVARSLLYLYMQECTLSKIN-PQFFTNLTTLNKLDLSGNPLRIIE 80
++++ N + + G SL + + +L P L L+ LDLS N L
Sbjct: 50 LSVSHNNLTTLHGELSSLPSLRAIVARANSLKNSGVPDDIFKLDDLSVLDLSHNQLTEC- 108
Query: 81 PGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKL 140
P + ++ L L+ ++ I F NL L L+LS+N+L+S + L L
Sbjct: 109 PRELENAKNMLVLNLSHNSIDTIPNQLFINLTDLLYLDLSENRLES---LPPQMRRLVHL 165
Query: 141 DTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHL 200
TL L + + + T L+ L+L + ++ T+L + L +L +DLS C+
Sbjct: 166 QTLVLNGNPLLHAQLRQLPAMTALQTLHLRSTQRTQSNLPTSL-EGLSNLADVDLS-CND 223
Query: 201 KGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHR 260
+ E + LR L LS N ++ +LS+ + + L+L L+ LP+ +
Sbjct: 224 LTRVPECLYT-LPSLRRLNLSSNQIT--ELSLCIDQWVHVETLNLSRNQLTSLPS-AICK 279
Query: 261 FTCLQELDISHNPL-IDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSG 319
+ L++L ++ N L D + + L +LE +NL+ + S + L+ L+L+
Sbjct: 280 LSKLKKLYLNSNKLDFDGLPSGIGKLTNLEEFMAANNNLELVPES-LCRCPKLRKLVLNK 338
Query: 320 NKLETLESGLFQNLTHLSVLEL 341
N L TL + LT + VL++
Sbjct: 339 NHLVTLPEAI-HFLTEIEVLDV 359
>MGI|MGI:1098644 [details] [associations]
symbol:Mfhas1 "malignant fibrous histiocytoma amplified
sequence 1" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:1098644
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875
Pfam:PF12799 InterPro:IPR020859 PROSITE:PS51424 HSSP:P07359
GeneTree:ENSGT00690000102098 EMBL:AC129082 EMBL:AC129211
EMBL:AK081646 EMBL:AK132349 EMBL:AK171731 IPI:IPI00669835
RefSeq:NP_001074748.1 UniGene:Mm.103246 ProteinModelPortal:Q3V1N1
SMR:Q3V1N1 STRING:Q3V1N1 PhosphoSite:Q3V1N1 PRIDE:Q3V1N1
Ensembl:ENSMUST00000037666 GeneID:52065 KEGG:mmu:52065
UCSC:uc009lla.1 CTD:9258 HOGENOM:HOG000113571 HOVERGEN:HBG108130
InParanoid:Q3V1N1 OMA:FFQRDAS OrthoDB:EOG4CVG64 ChiTaRS:MFHAS1
NextBio:308456 Bgee:Q3V1N1 Genevestigator:Q3V1N1 Uniprot:Q3V1N1
Length = 1048
Score = 209 (78.6 bits), Expect = 4.5e-13, P = 4.5e-13
Identities = 102/318 (32%), Positives = 148/318 (46%)
Query: 132 LVL-GNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATT-LGQNLVH 189
LVL N+G ++ L+L +G+ ++P+ + + LR L L N L A LG H
Sbjct: 52 LVLPANIGDIEVLNLGNNGLEDVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGH---H 108
Query: 190 LDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCG 249
L LD+S+ L L + +LR L LS N L A L L L L L +
Sbjct: 109 LTELDVSHNRLT-ILGAEVVSALRELRKLNLSHNQLPA--LPAQLGALAHLEELDVSFNR 165
Query: 250 LSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKM 309
L+ LP ++F L+ LD+ HN L AF L L +LE LD+ + L+ + +
Sbjct: 166 LAHLP-DSFSCLNHLRTLDVDHNQLT-AFPQQLLQLAALEELDVSSNRLRGLPED-ISAL 222
Query: 310 TSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLS 369
+LK L LSG +L TL G F L L L L+N GL L + E L+ L LS
Sbjct: 223 RALKILWLSGAELGTLPRG-FCELASLESLMLDNNGLQALPD----EFSRLQRLKMLNLS 277
Query: 370 GN-----PLHVLPDSTKQ--YSMR----TIPTQIWKNFDFLVILFILNETVFHENYTYPD 418
N P +LP + + Y R ++P+ I L+ L++ N + + + +
Sbjct: 278 SNLFEEFPAALLPLAGLEELYLSRNQLTSVPSLI-AGLGRLLTLWLDNNRIRYLPDSIVE 336
Query: 419 L---EELRLSGNPLHVLP 433
L EEL L GN + VLP
Sbjct: 337 LTGLEELVLQGNQIAVLP 354
Score = 173 (66.0 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 89/299 (29%), Positives = 136/299 (45%)
Query: 62 NLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQ 121
N+ + L+L N L + G+ L SL L+L R + P+ + +HL L++S
Sbjct: 57 NIGDIEVLNLGNNGLEDVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSH 116
Query: 122 NKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFA-------NNTWLRNLNLAE--- 171
N+L I V+ L +L L+L + + LP + A + ++ R +L +
Sbjct: 117 NRLT--ILGAEVVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSFS 174
Query: 172 --NELIDLDV----ATTLGQNLVHLDSLD-LS-NCHLKGPLSEDAFVNATK-LRTLYLSG 222
N L LDV T Q L+ L +L+ L + + L ED ++A + L+ L+LSG
Sbjct: 175 CLNHLRTLDVDHNQLTAFPQQLLQLAALEELDVSSNRLRGLPED--ISALRALKILWLSG 232
Query: 223 NPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALL 282
L L L L L L N GL LP + F R L+ L++S N L + F A L
Sbjct: 233 AELGT--LPRGFCELASLESLMLDNNGLQALP-DEFSRLQRLKMLNLSSN-LFEEFPAAL 288
Query: 283 SPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLEL 341
PL LE L + + L + S + L TL L N++ L + + LT L L L
Sbjct: 289 LPLAGLEELYLSRNQLTSVP-SLIAGLGRLLTLWLDNNRIRYLPDSIVE-LTGLEELVL 345
Score = 164 (62.8 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 82/325 (25%), Positives = 143/325 (44%)
Query: 22 INLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIE 80
+NL N ++ V EG SL L ++ +++ P L +LD+S N L I+
Sbjct: 64 LNLGNNGLEDVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRLTILG 123
Query: 81 PGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKL 140
V L L L L+ L + P+ L HL+ L++S N+L +H+ + L L
Sbjct: 124 AEVVSALRELRKLNLSHNQLPAL-PAQLGALAHLEELDVSFNRL-AHLPDSFSC--LNHL 179
Query: 141 DTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDL--DVATTLGQNLVHLDSLDLSNC 198
TLD+ + ++ P + L L+++ N L L D++ ++ L +L
Sbjct: 180 RTLDVDHNQLTAFPQQLLQLAA-LEELDVSSNRLRGLPEDISALRALKILWLSGAEL--- 235
Query: 199 HLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTF 258
G L F L +L L N L A L L +L L+L + PA
Sbjct: 236 ---GTLPR-GFCELASLESLMLDNNGLQA--LPDEFSRLQRLKMLNLSSNLFEEFPAALL 289
Query: 259 HRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILS 318
L+EL +S N L +L++ L L L + + ++ + S +++T L+ L+L
Sbjct: 290 P-LAGLEELYLSRNQLTSV-PSLIAGLGRLLTLWLDNNRIRYLPDS-IVELTGLEELVLQ 346
Query: 319 GNKLETLESGLFQNLTHLSVLELNN 343
GN++ L F L+ + + ++ +
Sbjct: 347 GNQIAVLPDN-FGQLSRVGLWKIKD 370
Score = 159 (61.0 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 99/344 (28%), Positives = 145/344 (42%)
Query: 65 TLNKLDLSGNPLRIIE-PGVFDP--LTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQ 121
TL+ G+PL + P + P + +E L L L + L L+ L L +
Sbjct: 33 TLSCPGAGGDPLESPDAPQLVLPANIGDIEVLNLGNNGLEDVPEGLGSALGSLRVLVLRR 92
Query: 122 NKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVAT 181
N+ LG+ L LD+ + ++ L V + LR LNL+ N+L L
Sbjct: 93 NRFARLPPAVAELGH--HLTELDVSHNRLTILGAEVVSALRELRKLNLSHNQLPALPAQ- 149
Query: 182 TLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSA-----------ADL 230
LG L HL+ LD+S L D+F LRTL + N L+A +L
Sbjct: 150 -LGA-LAHLEELDVSFNRLAH--LPDSFSCLNHLRTLDVDHNQLTAFPQQLLQLAALEEL 205
Query: 231 SVA----------LKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTA 280
V+ + L L L L L LP F L+ L + +N L A
Sbjct: 206 DVSSNRLRGLPEDISALRALKILWLSGAELGTLPRG-FCELASLESLMLDNNGL-QALPD 263
Query: 281 LLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLE 340
S L+ L+ L++ SNL + L + L+ L LS N+L ++ S L L L L
Sbjct: 264 EFSRLQRLKMLNLS-SNLFEEFPAALLPLAGLEELYLSRNQLTSVPS-LIAGLGRLLTLW 321
Query: 341 LNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQYS 384
L+N + L +++ LEEL L GN + VLPD+ Q S
Sbjct: 322 LDNNRIRYLPDSIVE----LTGLEELVLQGNQIAVLPDNFGQLS 361
Score = 39 (18.8 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 10/34 (29%), Positives = 16/34 (47%)
Query: 359 TYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQI 392
+Y ++ LS L+VL + Y R PT +
Sbjct: 479 SYEVIQPFFLSPGALYVLVVNLATYEPRCFPTTV 512
>UNIPROTKB|F1LN63 [details] [associations]
symbol:Tlr3 "Protein Tlr3" species:10116 "Rattus
norvegicus" [GO:0002756 "MyD88-independent toll-like receptor
signaling pathway" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004888 "transmembrane signaling
receptor activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0007252 "I-kappaB phosphorylation" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0032722
"positive regulation of chemokine production" evidence=IEA]
[GO:0032728 "positive regulation of interferon-beta production"
evidence=IEA] [GO:0032735 "positive regulation of interleukin-12
production" evidence=IEA] [GO:0032755 "positive regulation of
interleukin-6 production" evidence=IEA] [GO:0032757 "positive
regulation of interleukin-8 production" evidence=IEA] [GO:0032760
"positive regulation of tumor necrosis factor production"
evidence=IEA] [GO:0034123 "positive regulation of toll-like
receptor signaling pathway" evidence=IEA] [GO:0034138 "toll-like
receptor 3 signaling pathway" evidence=IEA] [GO:0034346 "positive
regulation of type III interferon production" evidence=IEA]
[GO:0042346 "positive regulation of NF-kappaB import into nucleus"
evidence=IEA] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0045078 "positive regulation of
interferon-gamma biosynthetic process" evidence=IEA] [GO:0045080
"positive regulation of chemokine biosynthetic process"
evidence=IEA] [GO:0045087 "innate immune response" evidence=IEA]
[GO:0045356 "positive regulation of interferon-alpha biosynthetic
process" evidence=IEA] [GO:0045359 "positive regulation of
interferon-beta biosynthetic process" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0046330 "positive regulation of JNK
cascade" evidence=IEA] [GO:0050729 "positive regulation of
inflammatory response" evidence=IEA] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=IEA] [GO:0051607 "defense response to virus" evidence=IEA]
[GO:0071260 "cellular response to mechanical stimulus"
evidence=IEA] Pfam:PF00560 InterPro:IPR000157 InterPro:IPR001611
InterPro:IPR027173 Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450
SMART:SM00255 RGD:735171 GO:GO:0016021 GO:GO:0005737 GO:GO:0006952
GO:GO:0043123 GO:GO:0046330 GO:GO:0045944 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0032722
GO:GO:0032755 GO:GO:0009615 GO:GO:0051092 GO:GO:0032757
GO:GO:0071260 InterPro:IPR000372 SMART:SM00013 GO:GO:0032760
GO:GO:0043330 GO:GO:0032735 GO:GO:0042346 GO:GO:0045078
InterPro:IPR026906 Pfam:PF13306 GO:GO:0032728 GO:GO:0007252
GO:GO:0045080 SUPFAM:SSF52200 GO:GO:0045359
GeneTree:ENSGT00680000099674 GO:GO:0034123 PANTHER:PTHR24365:SF5
GO:GO:0045356 GO:GO:0034346 OMA:WINKTHT IPI:IPI00382156
Ensembl:ENSRNOT00000035781 ArrayExpress:F1LN63 Uniprot:F1LN63
Length = 905
Score = 211 (79.3 bits), Expect = 4.7e-13, Sum P(2) = 4.7e-13
Identities = 103/396 (26%), Positives = 164/396 (41%)
Query: 52 LSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNL 111
L+ I +N+T LN L+ N LR + P F + L L +++ + P L
Sbjct: 43 LTHIPDDLPSNITVLN---LTHNQLRGLPPANFTRYSQLALLDAGFNSISKLEPELCQIL 99
Query: 112 NHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAE 171
LK L L N+L D T L L L + I + N F N L L+L+
Sbjct: 100 PLLKVLNLQHNELSQISDQTFAFCT--NLTELHLMSNSIRKIKSNPFKNQKSLIKLDLSR 157
Query: 172 NELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDA-FVNATKLRTLYLSGNPLSAADL 230
N L + T G L +L L L+ + SE+ F+ + L+ L LS NPL
Sbjct: 158 NGLSSTKLGT--GVQLENLQELLLAKNKIFALRSEELDFLGNSSLQKLDLSSNPLKEFSP 215
Query: 231 SVALKPLTKLHRLSLRNCGLS-RLPANTFHRF--TCLQELDISHNPLIDAFTALLSPLE- 286
+ KL L L N L+ L T +Q L +++N L+ + S L+
Sbjct: 216 G-CFHAIGKLFVLLLNNAQLNLNLTEKLCWELSNTSIQNLSLANNQLLATSNSTFSGLKQ 274
Query: 287 -SLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCG 345
+L LD+ Y++L+ + F + LK L L N +++L F+ L++L L L
Sbjct: 275 TNLTSLDLSYNSLRYVGNDAFSWLPHLKYLSLEYNNIQSLTPHSFRGLSNLRYLSLKRAF 334
Query: 346 LTRLNETVFHEN---YTYP---DLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFL 399
+ H N +++ LE L + N + + +T + + K F L
Sbjct: 335 TKQSVALASHPNIDDFSFQWLKCLEHLNMDDNTIPGIKSNTFTGLVSLKYLSLSKTFTGL 394
Query: 400 VILFILNETVFHENYTYPDLEELRLSGNPLHVLPTG 435
L NET + T+ L L L+ N + + +G
Sbjct: 395 QTL--TNETFV--SLTHSPLLTLNLTKNHISKIASG 426
Score = 195 (73.7 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 109/369 (29%), Positives = 163/369 (44%)
Query: 19 LITINLNANPIQPVEGAFLVARSLL-YLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLR 77
L ++ N I +E LL L +Q LS+I+ Q F T L +L L N +R
Sbjct: 78 LALLDAGFNSISKLEPELCQILPLLKVLNLQHNELSQISDQTFAFCTNLTELHLMSNSIR 137
Query: 78 IIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTL-VLGN 136
I+ F SL L L+R L+ L +L+ L L++NK+ + L LGN
Sbjct: 138 KIKSNPFKNQKSLIKLDLSRNGLSSTKLGTGVQLENLQELLLAKNKIFALRSEELDFLGN 197
Query: 137 LGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVH--LDSLD 194
L LDL + + F L L L N ++L++ L L + + +L
Sbjct: 198 -SSLQKLDLSSNPLKEFSPGCFHAIGKLFVL-LLNNAQLNLNLTEKLCWELSNTSIQNLS 255
Query: 195 LSNCHLKGPLSEDAF--VNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSR 252
L+N L S F + T L +L LS N L + A L L LSL +
Sbjct: 256 LANNQLLAT-SNSTFSGLKQTNLTSLDLSYNSLRYVG-NDAFSWLPHLKYLSLEYNNIQS 313
Query: 253 LPANTFH-----RFTCL------QELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRI 301
L ++F R+ L Q + ++ +P ID F+ L+ LEHL+M + + I
Sbjct: 314 LTPHSFRGLSNLRYLSLKRAFTKQSVALASHPNIDDFS--FQWLKCLEHLNMDDNTIPGI 371
Query: 302 SRSTFLKMTSLKTLILSGN--KLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYT 359
+TF + SLK L LS L+TL + F +LTH +L LN LT+ N + T
Sbjct: 372 KSNTFTGLVSLKYLSLSKTFTGLQTLTNETFVSLTHSPLLTLN---LTK-NHISKIASGT 427
Query: 360 YPDLEELRL 368
+ L +LR+
Sbjct: 428 FSWLGQLRI 436
Score = 149 (57.5 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 69/233 (29%), Positives = 111/233 (47%)
Query: 13 NLDNPGLITINLNANPIQPV-EGAF--LVARSLLYLYMQECTLSKINPQFFTNLTTLNKL 69
+L + L+T+NL N I + G F L +L L + E ++ Q + L + ++
Sbjct: 404 SLTHSPLLTLNLTKNHISKIASGTFSWLGQLRILDLGLNEIE-QELTGQEWRGLGNIFEI 462
Query: 70 DLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTY--ISPSAFDNLNHLKTLELSQNKLKSH 127
LS N + F + SL+ LML R L ISPS F L +L L+LS N + ++
Sbjct: 463 YLSYNKYLQLTSKSFTLVPSLQRLMLRRVALKSVDISPSPFRPLYNLTILDLSNNNI-AN 521
Query: 128 IDWTLVLGNLGKLDTLDLRQSGISNL--------PDNVFANNTWLRNLNLAENELIDLDV 179
++ L+ G L L+ LD + + ++ L P N + L LNL N L ++ V
Sbjct: 522 LNEDLLEG-LENLEILDFQHNNLARLWKHANPGGPVNFLKGLSHLHILNLESNGLDEIPV 580
Query: 180 ATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSV 232
+NL L S++L +L L F + T LR+L L N +++ + SV
Sbjct: 581 KVF--KNLFELKSINLGLNNLN-TLLPSIFDDQTSLRSLNLQKNLITSVEKSV 630
Score = 149 (57.5 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 76/261 (29%), Positives = 118/261 (45%)
Query: 130 WTLVLGNLG----KLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVAT-TLG 184
W LV+ + + + D ++++PD++ +N T L NL N+L L A T
Sbjct: 19 WILVVSSTNQCTVRYNVADCSHLKLTHIPDDLPSNITVL---NLTHNQLRGLPPANFTRY 75
Query: 185 QNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSA-ADLSVAL-KPLTKLHR 242
L LD+ S L+ L + + L+ L L N LS +D + A LT+LH
Sbjct: 76 SQLALLDAGFNSISKLEPELCQILPL----LKVLNLQHNELSQISDQTFAFCTNLTELHL 131
Query: 243 LSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNL--QR 300
+S N + ++ +N F L +LD+S N L LE+L+ L + + + R
Sbjct: 132 MS--N-SIRKIKSNPFKNQKSLIKLDLSRNGLSSTKLGTGVQLENLQELLLAKNKIFALR 188
Query: 301 ISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLT-RLNETVFHENYT 359
FL +SL+ L LS N L+ G F + L VL LNN L L E + E +
Sbjct: 189 SEELDFLGNSSLQKLDLSSNPLKEFSPGCFHAIGKLFVLLLNNAQLNLNLTEKLCWE-LS 247
Query: 360 YPDLEELRLSGNPLHVLPDST 380
++ L L+ N L +ST
Sbjct: 248 NTSIQNLSLANNQLLATSNST 268
Score = 145 (56.1 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 94/383 (24%), Positives = 155/383 (40%)
Query: 64 TTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQ-- 121
T L LDLS N LR + F L L+YL L N+ ++P +F L++L+ L L +
Sbjct: 275 TNLTSLDLSYNSLRYVGNDAFSWLPHLKYLSLEYNNIQSLTPHSFRGLSNLRYLSLKRAF 334
Query: 122 NK----LKSH--IDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELI 175
K L SH ID L L+ L++ + I + N F L+ L+L++
Sbjct: 335 TKQSVALASHPNID-DFSFQWLKCLEHLNMDDNTIPGIKSNTFTGLVSLKYLSLSKT-FT 392
Query: 176 DLDVATT-LGQNLVH--LDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSV 232
L T +L H L +L+L+ H+ ++ F +LR L L N +
Sbjct: 393 GLQTLTNETFVSLTHSPLLTLNLTKNHIS-KIASGTFSWLGQLRILDLGLNEIEQELTGQ 451
Query: 233 ALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPL--IDAFTALLSPLESLEH 290
+ L + + L +L + +F LQ L + L +D + PL +L
Sbjct: 452 EWRGLGNIFEIYLSYNKYLQLTSKSFTLVPSLQRLMLRRVALKSVDISPSPFRPLYNLTI 511
Query: 291 LDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETL-----ESGLFQNLTHLSVLELNNCG 345
LD+ +N+ ++ + +L+ L N L L G L LS L + N
Sbjct: 512 LDLSNNNIANLNEDLLEGLENLEILDFQHNNLARLWKHANPGGPVNFLKGLSHLHILNLE 571
Query: 346 LTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFIL 405
L+E +L+ + L N L+ L S + KN ++ +
Sbjct: 572 SNGLDEIPVKVFKNLFELKSINLGLNNLNTLLPSIFDDQTSLRSLNLQKN-----LITSV 626
Query: 406 NETVFHENYTYPDLEELRLSGNP 428
++VF + +L L +S NP
Sbjct: 627 EKSVFGP--AFHNLNSLDMSFNP 647
Score = 141 (54.7 bits), Expect = 8.5e-06, P = 8.5e-06
Identities = 58/196 (29%), Positives = 92/196 (46%)
Query: 12 RNLDNPGLITINLNANP-IQPVEGAFLVARSLLYLYMQECTLSK--INPQFFTNLTTLNK 68
R L N + I L+ N +Q +F + SL L ++ L I+P F L L
Sbjct: 454 RGLGN--IFEIYLSYNKYLQLTSKSFTLVPSLQRLMLRRVALKSVDISPSPFRPLYNLTI 511
Query: 69 LDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYI-------SPSAF-DNLNHLKTLELS 120
LDLS N + + + + L +LE L NL + P F L+HL L L
Sbjct: 512 LDLSNNNIANLNEDLLEGLENLEILDFQHNNLARLWKHANPGGPVNFLKGLSHLHILNLE 571
Query: 121 QNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVA 180
N L I V NL +L +++L + ++ L ++F + T LR+LNL +N + ++
Sbjct: 572 SNGL-DEIP-VKVFKNLFELKSINLGLNNLNTLLPSIFDDQTSLRSLNLQKNLITSVE-K 628
Query: 181 TTLGQNLVHLDSLDLS 196
+ G +L+SLD+S
Sbjct: 629 SVFGPAFHNLNSLDMS 644
Score = 46 (21.3 bits), Expect = 4.7e-13, Sum P(2) = 4.7e-13
Identities = 9/33 (27%), Positives = 20/33 (60%)
Query: 455 IDYLPPNVFNNTRNITSLNLANNNLSMTSELSF 487
++ L P++F++ ++ SLNL N ++ + F
Sbjct: 599 LNTLLPSIFDDQTSLRSLNLQKNLITSVEKSVF 631
>MGI|MGI:2389174 [details] [associations]
symbol:Lrrtm2 "leucine rich repeat transmembrane neuronal 2"
species:10090 "Mus musculus" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=ISS] [GO:0030054 "cell junction"
evidence=IEA] [GO:0042043 "neurexin family protein binding"
evidence=ISO] [GO:0045202 "synapse" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0050808 "synapse
organization" evidence=IGI;ISO] [GO:0060076 "excitatory synapse"
evidence=ISO] InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:2389174
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0050808
InterPro:IPR000372 SMART:SM00013 InterPro:IPR025875 Pfam:PF12799
GeneTree:ENSGT00700000104056 HOGENOM:HOG000290681
HOVERGEN:HBG052362 CTD:26045 OMA:IRQCSMI OrthoDB:EOG4PG60Z
EMBL:AY182027 EMBL:AK043173 EMBL:AK043784 EMBL:AK044705
EMBL:AK046818 EMBL:AK049920 EMBL:AK122278 IPI:IPI00313492
RefSeq:NP_821072.1 UniGene:Mm.39900 ProteinModelPortal:Q8BGA3
SMR:Q8BGA3 STRING:Q8BGA3 PhosphoSite:Q8BGA3 PaxDb:Q8BGA3
PRIDE:Q8BGA3 DNASU:107065 Ensembl:ENSMUST00000091636 GeneID:107065
KEGG:mmu:107065 UCSC:uc008ema.1 InParanoid:Q8BGA3 NextBio:358560
Bgee:Q8BGA3 CleanEx:MM_LRRTM2 Genevestigator:Q8BGA3
GermOnline:ENSMUSG00000071862 Uniprot:Q8BGA3
Length = 515
Score = 195 (73.7 bits), Expect = 4.8e-13, Sum P(2) = 4.8e-13
Identities = 73/255 (28%), Positives = 118/255 (46%)
Query: 69 LDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHI 128
L L N + +E F + L +L L+ ++ + AF L LK L LS NK+
Sbjct: 66 LSLRHNHITALERDQFASFSQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLP 125
Query: 129 DWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLV 188
+ T L L LDL + +S+L +F L+ L+L N L + V L +
Sbjct: 126 NTTFT--QLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIPVR--LFWDCR 181
Query: 189 HLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNC 248
L+ LDLS L+ L+ + F KLR L+L N L+ + + L+ L+ LH L L+
Sbjct: 182 SLEFLDLSTNRLRS-LARNGFAGLIKLRELHLEHNQLTKINFAHFLR-LSSLHTLFLQWN 239
Query: 249 GLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLK 308
+S L ++ L++LD++ N + + + +L+ L M + L +
Sbjct: 240 KISNLTCGMDWTWSTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNNKLNSLDSKILNS 299
Query: 309 MTSLKTLILSGNKLE 323
+ SL T+ LSGN E
Sbjct: 300 LKSLTTVGLSGNLWE 314
Score = 192 (72.6 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 78/256 (30%), Positives = 121/256 (47%)
Query: 135 GNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLD 194
G+LG L LR + I+ L + FA+ + L L+L N++ V Q L L L
Sbjct: 62 GSLG----LSLRHNHITALERDQFASFSQLTWLHLDHNQIST--VKEDAFQGLYKLKELI 115
Query: 195 LSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLP 254
LS+ + L F L+ L LS N LS+ + L KL L LR+ L +P
Sbjct: 116 LSSNKIFY-LPNTTFTQLINLQNLDLSFNQLSSLHPEL-FYGLRKLQTLHLRSNSLRTIP 173
Query: 255 ANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKT 314
F L+ LD+S N L + L L L + ++ L +I+ + FL+++SL T
Sbjct: 174 VRLFWDCRSLEFLDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLRLSSLHT 233
Query: 315 LILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLH 374
L L NK+ L G+ + L L+L + ++ TVF T P+L+ L + N L+
Sbjct: 234 LFLQWNKISNLTCGMDWTWSTLEKLDLTGNEIKAIDLTVFE---TMPNLKILLMDNNKLN 290
Query: 375 VLPDSTKQYSMRTIPT 390
L DS S++++ T
Sbjct: 291 SL-DSKILNSLKSLTT 305
Score = 166 (63.5 bits), Expect = 7.6e-10, Sum P(2) = 7.6e-10
Identities = 68/250 (27%), Positives = 114/250 (45%)
Query: 93 LMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISN 152
L L ++T + F + + L L L N++ S + G L KL L L + I
Sbjct: 66 LSLRHNHITALERDQFASFSQLTWLHLDHNQI-STVKEDAFQG-LYKLKELILSSNKIFY 123
Query: 153 LPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNA 212
LP+ F L+NL+L+ N+L L G L L +L L + L+ + F +
Sbjct: 124 LPNTTFTQLINLQNLDLSFNQLSSLHPELFYG--LRKLQTLHLRSNSLR-TIPVRLFWDC 180
Query: 213 TKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHN 272
L L LS N L + + L KL L L + L+++ F R + L L + N
Sbjct: 181 RSLEFLDLSTNRLRSLARN-GFAGLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWN 239
Query: 273 PLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQN 332
+ + + +LE LD+ + ++ I + F M +LK L++ NKL +L+S + +
Sbjct: 240 KISNLTCGMDWTWSTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNNKLNSLDSKILNS 299
Query: 333 LTHLSVLELN 342
L L+ + L+
Sbjct: 300 LKSLTTVGLS 309
Score = 162 (62.1 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 66/244 (27%), Positives = 113/244 (46%)
Query: 60 FTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLEL 119
F + + L L L N + ++ F L L+ L+L+ + Y+ + F L +L+ L+L
Sbjct: 81 FASFSQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLPNTTFTQLINLQNLDL 140
Query: 120 SQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDV 179
S N+L S + L G L KL TL LR + + +P +F + L L+L+ N L L
Sbjct: 141 SFNQLSS-LHPELFYG-LRKLQTLHLRSNSLRTIPVRLFWDCRSLEFLDLSTNRLRSL-- 196
Query: 180 ATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALK-PLT 238
A L+ L L L + L ++ F+ + L TL+L N +S +L+ + +
Sbjct: 197 ARNGFAGLIKLRELHLEHNQLT-KINFAHFLRLSSLHTLFLQWNKIS--NLTCGMDWTWS 253
Query: 239 KLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNL 298
L +L L + + F L+ L + +N L + +L+ L+SL + + NL
Sbjct: 254 TLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNNKLNSLDSKILNSLKSLTTVGLS-GNL 312
Query: 299 QRIS 302
S
Sbjct: 313 WECS 316
Score = 154 (59.3 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 58/175 (33%), Positives = 89/175 (50%)
Query: 52 LSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNL 111
LS ++P+ F L L L L N LR I +F SLE+L L+ L ++ + F L
Sbjct: 145 LSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEFLDLSTNRLRSLARNGFAGL 204
Query: 112 NHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTW--LRNLNL 169
L+ L L N+L + I++ L L L TL L+ + ISNL + + TW L L+L
Sbjct: 205 IKLRELHLEHNQL-TKINFAHFL-RLSSLHTLFLQWNKISNLTCGM--DWTWSTLEKLDL 260
Query: 170 AENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATK-LRTLYLSGN 223
NE+ +D+ T+ + + +L L + N L + +N+ K L T+ LSGN
Sbjct: 261 TGNEIKAIDL--TVFETMPNLKILLMDNNKLNS--LDSKILNSLKSLTTVGLSGN 311
Score = 137 (53.3 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 65/225 (28%), Positives = 100/225 (44%)
Query: 19 LITINLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLR 77
L ++L+ N I V E AF L L + + + FT L L LDLS N L
Sbjct: 87 LTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLPNTTFTQLINLQNLDLSFNQLS 146
Query: 78 IIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNL 137
+ P +F L L+ L L +L I F + L+ L+LS N+L+S + G L
Sbjct: 147 SLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEFLDLSTNRLRS-LARNGFAG-L 204
Query: 138 GKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVH--LDSLDL 195
KL L L + ++ + F + L L L N++ +L T G + L+ LDL
Sbjct: 205 IKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNKISNL----TCGMDWTWSTLEKLDL 260
Query: 196 SNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSV--ALKPLT 238
+ +K + F L+ L + N L++ D + +LK LT
Sbjct: 261 TGNEIKA-IDLTVFETMPNLKILLMDNNKLNSLDSKILNSLKSLT 304
Score = 126 (49.4 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 57/248 (22%), Positives = 106/248 (42%)
Query: 243 LSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRIS 302
LSLR+ ++ L + F F+ L L + HN + L L+ L + + + +
Sbjct: 66 LSLRHNHITALERDQFASFSQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLP 125
Query: 303 RSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHE--NYTY 360
+TF ++ +L+ L LS N+L +L LF L L L L + L + +F + + +
Sbjct: 126 NTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEF 185
Query: 361 PDLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWK-NF-DFLVI-----LFI----LNETV 409
DL RL + K + Q+ K NF FL + LF+ ++
Sbjct: 186 LDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNKISNLT 245
Query: 410 FHENYTYPDLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNI 469
++T+ LE+L L+GN + + K++ L + N+ +++
Sbjct: 246 CGMDWTWSTLEKLDLTGNEIKAIDL--TVFETMPNLKILLMDNNKLNSLDSKILNSLKSL 303
Query: 470 TSLNLANN 477
T++ L+ N
Sbjct: 304 TTVGLSGN 311
Score = 55 (24.4 bits), Expect = 4.8e-13, Sum P(2) = 4.8e-13
Identities = 8/30 (26%), Positives = 17/30 (56%)
Query: 513 VLRHNRAITSIKLVGNPWKCDCNIADMWEW 542
+L +++T++ L GN W+C + + W
Sbjct: 296 ILNSLKSLTTVGLSGNLWECSPRVCALASW 325
>UNIPROTKB|F1P1I2 [details] [associations]
symbol:PHLPP1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0005543 "phospholipid binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR001849 InterPro:IPR001932
Pfam:PF00481 PROSITE:PS50003 PROSITE:PS51450 SMART:SM00233
SMART:SM00332 GO:GO:0003824 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0008152 Gene3D:3.60.40.10 SUPFAM:SSF81606
GeneTree:ENSGT00440000037833 EMBL:AADN02036501 IPI:IPI00819603
Ensembl:ENSGALT00000021018 ArrayExpress:F1P1I2 Uniprot:F1P1I2
Length = 1175
Score = 209 (78.6 bits), Expect = 5.3e-13, P = 5.3e-13
Identities = 110/425 (25%), Positives = 187/425 (44%)
Query: 19 LITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRI 78
L T L+ N +Q + L Y+ + + I P LT ++KL +SGN +
Sbjct: 209 LQTFLLDGNFLQSLPDELEHMHQLSYVSLSFNEFTDI-PGVLEKLTAMDKLCMSGNCVDT 267
Query: 79 IEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLG 138
+ V + ++++ L ++ + D L+H+ L+L NKL +D T+
Sbjct: 268 LNLQVLKRMPHIKHVDLRLNSIRRLEADEIDFLHHVTQLDLRDNKL-GELDATI----FN 322
Query: 139 KLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNC 198
++ L ++ + L + + +L+ L + NEL+ LDV N +L +D+S
Sbjct: 323 NVEVLHCERNQLVTLKISGY----FLKALYASSNELVHLDVYPV--PN--YLTYMDISRN 374
Query: 199 HLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTF 258
HL+ L E ++ KL L + N +S +L L + L +L + L RLP +
Sbjct: 375 HLEN-LPEWV-CDSKKLEVLDVGHNRIS--ELPARLFYNSSLRKLLAGHNLLGRLP-DRL 429
Query: 259 HRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTS--LKTLI 316
R T ++ LD+ HN L++ LL +SL L+ + L+ + +T + T L+ L
Sbjct: 430 ER-TQVEVLDVQHNQLLELPPNLLLKADSLRFLNASANKLEMLPPATLSEETHSILQELY 488
Query: 317 LSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVL 376
L+ N L L HL +L + RL + +LEE+ +SGN L +
Sbjct: 489 LTNNNLTDKCVPLLTGHPHLKILHM---AYNRLQSFPASKMAKLEELEEIDISGNKLKAI 545
Query: 377 PDSTKQYS-MRTIPT-----QIWKNFDFL-----VILFI--LNETVFHENYTYPDLEELR 423
P + M T+ +++ L V L L+E EN P L+EL
Sbjct: 546 PTTIMNCRRMHTVIAHSNCIEVFPEVMQLSEIKCVDLSCNELSEITLPENLP-PKLQELD 604
Query: 424 LSGNP 428
L+GNP
Sbjct: 605 LTGNP 609
Score = 174 (66.3 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 76/272 (27%), Positives = 131/272 (48%)
Query: 112 NHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAE 171
N+L +++S+N L++ +W + KL+ LD+ + IS LP +F N++ LR L LA
Sbjct: 364 NYLTYMDISRNHLENLPEWVC---DSKKLEVLDVGHNRISELPARLFYNSS-LRKL-LAG 418
Query: 172 NELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAAD-L 230
+ L+ + L + V + LD+ + L L + + A LR L S N L
Sbjct: 419 HNLLGR-LPDRLERTQVEV--LDVQHNQLL-ELPPNLLLKADSLRFLNASANKLEMLPPA 474
Query: 231 SVALKPLTKLHRLSLRNCGLSR--LPANTFHRFTCLQELDISHNPLIDAFTALLSPLESL 288
+++ + + L L L N L+ +P T H L+ L +++N L + ++ LE L
Sbjct: 475 TLSEETHSILQELYLTNNNLTDKCVPLLTGHPH--LKILHMAYNRLQSFPASKMAKLEEL 532
Query: 289 EHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTR 348
E +D+ + L+ I +T + + T+I N +E +F + LS ++ +
Sbjct: 533 EEIDISGNKLKAIP-TTIMNCRRMHTVIAHSNCIE-----VFPEVMQLSEIKCVDLSCNE 586
Query: 349 LNETVFHENYTYPDLEELRLSGNPLHVLPDST 380
L+E EN P L+EL L+GNP L T
Sbjct: 587 LSEITLPENLP-PKLQELDLTGNPRLALDHKT 617
Score = 136 (52.9 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 101/397 (25%), Positives = 162/397 (40%)
Query: 57 PQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKT 116
P ++ TL +L++S N LR + P V + +L+ +L+ N P ++++ L
Sbjct: 177 PLAVCSIPTLTELNVSCNALRNV-PAVVGEMHNLQTFLLDG-NFLQSLPDELEHMHQLSY 234
Query: 117 LELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELID 176
+ LS N+ D VL L +D L + + + L V +++++L N +
Sbjct: 235 VSLSFNEFT---DIPGVLEKLTAMDKLCMSGNCVDTLNLQVLKRMPHIKHVDLRLNSIRR 291
Query: 177 LDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNA-------TKLRTLYLSGNPLSAAD 229
L+ A + L H+ LDL + L G L F N +L TL +SG L A
Sbjct: 292 LE-ADEI-DFLHHVTQLDLRDNKL-GELDATIFNNVEVLHCERNQLVTLKISGYFLKA-- 346
Query: 230 LSVALKPLTKLHRLSLRN----CGLSRLPANTFHRFTC----LQELDISHNPLIDAFTAL 281
L + L L + N +SR + C L+ LD+ HN I A
Sbjct: 347 LYASSNELVHLDVYPVPNYLTYMDISRNHLENLPEWVCDSKKLEVLDVGHNR-ISELPAR 405
Query: 282 LSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLEL 341
L SL L G++ L R+ L+ T ++ L + N+L L L L L
Sbjct: 406 LFYNSSLRKLLAGHNLLGRLPDR--LERTQVEVLDVQHNQLLELPPNLLLKADSLRFLNA 463
Query: 342 NNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVI 401
+ L L E T+ L+EL L+ N L + + +P + L I
Sbjct: 464 SANKLEMLPPATLSEE-THSILQELYLTNNNL----------TDKCVP--LLTGHPHLKI 510
Query: 402 LFI----LNETVFHENYTYPDLEELRLSGNPLHVLPT 434
L + L + +LEE+ +SGN L +PT
Sbjct: 511 LHMAYNRLQSFPASKMAKLEELEEIDISGNKLKAIPT 547
Score = 130 (50.8 bits), Expect = 0.00086, Sum P(2) = 0.00085
Identities = 62/250 (24%), Positives = 112/250 (44%)
Query: 139 KLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENEL-IDLDVATTLGQNLVHLDSLDLSN 197
++ ++DL + +LP N+F + L +LNL +N L ++ + T L SL+LSN
Sbjct: 112 RISSVDLSCCSLEHLPANLFYSQD-LTHLNLKQNFLNLERNTGLTSLCRFTKLKSLNLSN 170
Query: 198 CHLKG-PLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPAN 256
+L PL+ + T+L +S N L ++ + + L L L LP
Sbjct: 171 NNLGDFPLAVCSIPTLTELN---VSCNALR--NVPAVVGEMHNLQTFLLDGNFLQSLPDE 225
Query: 257 TFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLI 316
H L + +S N D +L L +++ L M + + ++ +M +K +
Sbjct: 226 LEHMHQ-LSYVSLSFNEFTD-IPGVLEKLTAMDKLCMSGNCVDTLNLQVLKRMPHIKHVD 283
Query: 317 LSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHE----NYTYPDLEELRLSGNP 372
L N + LE+ L H++ L+L + L L+ T+F+ + L L++SG
Sbjct: 284 LRLNSIRRLEADEIDFLHHVTQLDLRDNKLGELDATIFNNVEVLHCERNQLVTLKISGYF 343
Query: 373 LHVLPDSTKQ 382
L L S+ +
Sbjct: 344 LKALYASSNE 353
Score = 43 (20.2 bits), Expect = 0.00086, Sum P(2) = 0.00085
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 458 LPPNVFNNTRNITSLNLANNNLSM 481
LPPN+ ++ LN + N L M
Sbjct: 447 LPPNLLLKADSLRFLNASANKLEM 470
>UNIPROTKB|F1NJB8 [details] [associations]
symbol:PHLPP1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0005543 "phospholipid binding" evidence=IEA] [GO:0009649
"entrainment of circadian clock" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR001849 InterPro:IPR001932
Pfam:PF00481 PROSITE:PS50003 PROSITE:PS51450 SMART:SM00233
SMART:SM00332 GO:GO:0003824 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0009649 GO:GO:0008152 Gene3D:3.60.40.10
SUPFAM:SSF81606 GeneTree:ENSGT00440000037833 OMA:CCELSAG
EMBL:AADN02036501 IPI:IPI00583561 Ensembl:ENSGALT00000037175
ArrayExpress:F1NJB8 Uniprot:F1NJB8
Length = 1181
Score = 209 (78.6 bits), Expect = 5.3e-13, P = 5.3e-13
Identities = 110/425 (25%), Positives = 187/425 (44%)
Query: 19 LITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRI 78
L T L+ N +Q + L Y+ + + I P LT ++KL +SGN +
Sbjct: 215 LQTFLLDGNFLQSLPDELEHMHQLSYVSLSFNEFTDI-PGVLEKLTAMDKLCMSGNCVDT 273
Query: 79 IEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLG 138
+ V + ++++ L ++ + D L+H+ L+L NKL +D T+
Sbjct: 274 LNLQVLKRMPHIKHVDLRLNSIRRLEADEIDFLHHVTQLDLRDNKL-GELDATI----FN 328
Query: 139 KLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNC 198
++ L ++ + L + + +L+ L + NEL+ LDV N +L +D+S
Sbjct: 329 NVEVLHCERNQLVTLKISGY----FLKALYASSNELVHLDVYPV--PN--YLTYMDISRN 380
Query: 199 HLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTF 258
HL+ L E ++ KL L + N +S +L L + L +L + L RLP +
Sbjct: 381 HLEN-LPEWV-CDSKKLEVLDVGHNRIS--ELPARLFYNSSLRKLLAGHNLLGRLP-DRL 435
Query: 259 HRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTS--LKTLI 316
R T ++ LD+ HN L++ LL +SL L+ + L+ + +T + T L+ L
Sbjct: 436 ER-TQVEVLDVQHNQLLELPPNLLLKADSLRFLNASANKLEMLPPATLSEETHSILQELY 494
Query: 317 LSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVL 376
L+ N L L HL +L + RL + +LEE+ +SGN L +
Sbjct: 495 LTNNNLTDKCVPLLTGHPHLKILHM---AYNRLQSFPASKMAKLEELEEIDISGNKLKAI 551
Query: 377 PDSTKQYS-MRTIPT-----QIWKNFDFL-----VILFI--LNETVFHENYTYPDLEELR 423
P + M T+ +++ L V L L+E EN P L+EL
Sbjct: 552 PTTIMNCRRMHTVIAHSNCIEVFPEVMQLSEIKCVDLSCNELSEITLPENLP-PKLQELD 610
Query: 424 LSGNP 428
L+GNP
Sbjct: 611 LTGNP 615
Score = 174 (66.3 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 76/272 (27%), Positives = 131/272 (48%)
Query: 112 NHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAE 171
N+L +++S+N L++ +W + KL+ LD+ + IS LP +F N++ LR L LA
Sbjct: 370 NYLTYMDISRNHLENLPEWVC---DSKKLEVLDVGHNRISELPARLFYNSS-LRKL-LAG 424
Query: 172 NELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAAD-L 230
+ L+ + L + V + LD+ + L L + + A LR L S N L
Sbjct: 425 HNLLGR-LPDRLERTQVEV--LDVQHNQLL-ELPPNLLLKADSLRFLNASANKLEMLPPA 480
Query: 231 SVALKPLTKLHRLSLRNCGLSR--LPANTFHRFTCLQELDISHNPLIDAFTALLSPLESL 288
+++ + + L L L N L+ +P T H L+ L +++N L + ++ LE L
Sbjct: 481 TLSEETHSILQELYLTNNNLTDKCVPLLTGHPH--LKILHMAYNRLQSFPASKMAKLEEL 538
Query: 289 EHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTR 348
E +D+ + L+ I +T + + T+I N +E +F + LS ++ +
Sbjct: 539 EEIDISGNKLKAIP-TTIMNCRRMHTVIAHSNCIE-----VFPEVMQLSEIKCVDLSCNE 592
Query: 349 LNETVFHENYTYPDLEELRLSGNPLHVLPDST 380
L+E EN P L+EL L+GNP L T
Sbjct: 593 LSEITLPENLP-PKLQELDLTGNPRLALDHKT 623
Score = 137 (53.3 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 111/442 (25%), Positives = 177/442 (40%)
Query: 19 LITINLNAN--PIQPVEGAFLVARSLL-YLYMQECTLSKIN----PQFFTNLTTLNKLDL 71
L +NL N + P A L + ++ LS N P ++ TL +L++
Sbjct: 138 LTHLNLKQNFLKLNPSPSASRALSELQRFTKLKSLNLSNNNLGDFPLAVCSIPTLTELNV 197
Query: 72 SGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWT 131
S N LR + P V + +L+ +L+ N P ++++ L + LS N+ D
Sbjct: 198 SCNALRNV-PAVVGEMHNLQTFLLDG-NFLQSLPDELEHMHQLSYVSLSFNEFT---DIP 252
Query: 132 LVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLD 191
VL L +D L + + + L V +++++L N + L+ A + L H+
Sbjct: 253 GVLEKLTAMDKLCMSGNCVDTLNLQVLKRMPHIKHVDLRLNSIRRLE-ADEI-DFLHHVT 310
Query: 192 SLDLSNCHLKGPLSEDAFVNA-------TKLRTLYLSGNPLSAADLSVALKPLTKLHRLS 244
LDL + L G L F N +L TL +SG L A L + L L
Sbjct: 311 QLDLRDNKL-GELDATIFNNVEVLHCERNQLVTLKISGYFLKA--LYASSNELVHLDVYP 367
Query: 245 LRN----CGLSRLPANTFHRFTC----LQELDISHNPLIDAFTALLSPLESLEHLDMGYS 296
+ N +SR + C L+ LD+ HN I A L SL L G++
Sbjct: 368 VPNYLTYMDISRNHLENLPEWVCDSKKLEVLDVGHNR-ISELPARLFYNSSLRKLLAGHN 426
Query: 297 NLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHE 356
L R+ L+ T ++ L + N+L L L L L + L L E
Sbjct: 427 LLGRLPDR--LERTQVEVLDVQHNQLLELPPNLLLKADSLRFLNASANKLEMLPPATLSE 484
Query: 357 NYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFI----LNETVFHE 412
T+ L+EL L+ N L + + +P + L IL + L +
Sbjct: 485 E-THSILQELYLTNNNL----------TDKCVP--LLTGHPHLKILHMAYNRLQSFPASK 531
Query: 413 NYTYPDLEELRLSGNPLHVLPT 434
+LEE+ +SGN L +PT
Sbjct: 532 MAKLEELEEIDISGNKLKAIPT 553
>UNIPROTKB|F1P0K8 [details] [associations]
symbol:Gga.13956 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007165 "signal transduction" evidence=IEA]
Pfam:PF00560 InterPro:IPR000488 InterPro:IPR001611 PROSITE:PS50017
PROSITE:PS51450 GO:GO:0007165 InterPro:IPR003591 SMART:SM00369
Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
InterPro:IPR025875 Pfam:PF12799 GeneTree:ENSGT00700000104287
EMBL:AADN02000699 IPI:IPI00585441 ProteinModelPortal:F1P0K8
Ensembl:ENSGALT00000015265 OMA:CYLESAD Uniprot:F1P0K8
Length = 713
Score = 206 (77.6 bits), Expect = 5.4e-13, P = 5.4e-13
Identities = 118/477 (24%), Positives = 205/477 (42%)
Query: 19 LITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRI 78
L T+ L N ++ + + ++L L + +S I P+ L L L L N ++
Sbjct: 113 LETLELAGNKLKTLSDTMVDMKNLKVLNIDSNQIS-IFPRVLCYLPNLVSLSLCENFIQS 171
Query: 79 IEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLG 138
+ P L L+ ++ L ++S F L LK L NKL+ D + NL
Sbjct: 172 L-PKDIKGLKKLQEFSVSHNKLMFLSVQLFQ-LTKLKRLRADDNKLEFLSD---KVENLR 226
Query: 139 KLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNC 198
+L L+L ++ + DN+ N T L++L L +N+L L L HL L LS
Sbjct: 227 ELTFLNLSKNLFKTITDNL-CNCTMLKHLILCDNQLTQLPANI---DRLKHLKELSLSGN 282
Query: 199 HLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTF 258
L L E + L + LSGN L+ + V LK T++ + L N LS+ P
Sbjct: 283 QLNS-LDEQ-ISHLKDLSKIELSGNVLTY--IPVELKTCTQITKADLSNNKLSQFPY-AL 337
Query: 259 HRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILS 318
+ L+ L++S N + + + S ++ LEHL++ + L S + +T L L +S
Sbjct: 338 CALSDLKYLNLSGNSISELIPGI-SDIKDLEHLELNKNKLSSFS-ACLCSLTKLVYLDVS 395
Query: 319 GNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLP- 377
N++ +L + + + L VL L++ E E + L+ L +S N + +P
Sbjct: 396 ENEINSLPA-VVSEMKALQVLLLHHNKFGSFPE----ELCSLKGLKTLDISNNQIKTIPL 450
Query: 378 -----DSTKQYSMR-----TIPTQIW--KNFDFLVILFI--LNETVFHENYT-YPDLEEL 422
++ K ++ + P++I + + L + + L T E + L EL
Sbjct: 451 KISRLETIKDLNVSNNQFASFPSEICHLSSLEKLTVCQMNGLKLTKIPEELSKLVSLREL 510
Query: 423 RLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNL 479
+S N L +P +I LP ++ + RN+ L+L+ N L
Sbjct: 511 DISHNALKEMPDSIGELKYLVHLIANNN---EISQLPKSI-TSLRNLQHLDLSENRL 563
Score = 198 (74.8 bits), Expect = 4.0e-12, P = 4.0e-12
Identities = 87/320 (27%), Positives = 151/320 (47%)
Query: 13 NLDN-PGLITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDL 71
N+D L ++L+ N + ++ + L + + L+ I P T + K DL
Sbjct: 267 NIDRLKHLKELSLSGNQLNSLDEQISHLKDLSKIELSGNVLTYI-PVELKTCTQITKADL 325
Query: 72 SGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWT 131
S N L P L+ L+YL L+ +++ + P D + L+ LEL++NKL S ++
Sbjct: 326 SNNKLSQF-PYALCALSDLKYLNLSGNSISELIPGISD-IKDLEHLELNKNKLSS---FS 380
Query: 132 LVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLD 191
L +L KL LD+ ++ I++LP V + L+ L L N+ +L L
Sbjct: 381 ACLCSLTKLVYLDVSENEINSLPA-VVSEMKALQVLLLHHNKFGSFPEELC---SLKGLK 436
Query: 192 SLDLSNCHLKG-PLSEDAFVNATKLRTLYLSGNPLSAADLSVA-LKPLTKLHRLSLRNCG 249
+LD+SN +K PL ++ L +S N ++ + L L KL +
Sbjct: 437 TLDISNNQIKTIPLK---ISRLETIKDLNVSNNQFASFPSEICHLSSLEKLTVCQMNGLK 493
Query: 250 LSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKM 309
L+++P + L+ELDISHN L + ++ L+ L HL + + ++ +S +
Sbjct: 494 LTKIPEE-LSKLVSLRELDISHNALKEMPDSI-GELKYLVHLIANNNEISQLPKS-ITSL 550
Query: 310 TSLKTLILSGNKLETLESGL 329
+L+ L LS N+L L +GL
Sbjct: 551 RNLQHLDLSENRLRYLPAGL 570
Score = 158 (60.7 bits), Expect = 8.9e-08, P = 8.9e-08
Identities = 66/272 (24%), Positives = 125/272 (45%)
Query: 57 PQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKT 116
P L+ L L+LSGN + + PG+ D + LE+L LN+ L+ S + +L L
Sbjct: 334 PYALCALSDLKYLNLSGNSISELIPGISD-IKDLEHLELNKNKLSSFS-ACLCSLTKLVY 391
Query: 117 LELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELID 176
L++S+N++ S V+ + L L L + + P+ + + L+ L+++ N++
Sbjct: 392 LDVSENEINS---LPAVVSEMKALQVLLLHHNKFGSFPEEL-CSLKGLKTLDISNNQIKT 447
Query: 177 LDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNAT-KLRTLYLSGNPLSAADLSVALK 235
+ + + L + L++SN SE +++ KL ++G L + L
Sbjct: 448 IPLKIS---RLETIKDLNVSNNQFASFPSEICHLSSLEKLTVCQMNG--LKLTKIPEELS 502
Query: 236 PLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGY 295
L L L + + L +P ++ L L I++N I ++ L +L+HLD+
Sbjct: 503 KLVSLRELDISHNALKEMP-DSIGELKYLVHL-IANNNEISQLPKSITSLRNLQHLDLSE 560
Query: 296 SNLQRISRSTFLKMTSLKTLILSGNKL-ETLE 326
+ L+ + + LK + GN L E L+
Sbjct: 561 NRLRYLPAG-LRHLYLLKDINFDGNSLFEPLQ 591
Score = 152 (58.6 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 109/390 (27%), Positives = 170/390 (43%)
Query: 76 LRIIEPGVFD-PLTSLEY-----LMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHID 129
LR+ + G+ D PL++ E L+L + + + NL +L+ L L +N+L + +
Sbjct: 4 LRLSDKGLQDVPLSASETQNVKTLLLQNNEIKTLRLNTV-NLTNLEILILERNRL-TQLP 61
Query: 130 WTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVH 189
+ L L KL L++ + +S LP+ + ++ L L N + + A L
Sbjct: 62 PEISL--LHKLKVLNVSHNRLSCLPEEL-PKLVNIKELFLNHNNIDEFPFA------LKS 112
Query: 190 LDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCG 249
L++L+L+ LK LS D V+ L+ L + N +S + P L LSL
Sbjct: 113 LETLELAGNKLK-TLS-DTMVDMKNLKVLNIDSNQISIFPRVLCYLP--NLVSLSLCENF 168
Query: 250 LSRLPANTFHRFTCLQELDISHNPLIDAFTAL--LSPLE-------SLEHLDMGYSNLQR 300
+ LP + LQE +SHN L+ L L+ L+ LE L NL+
Sbjct: 169 IQSLPKD-IKGLKKLQEFSVSHNKLMFLSVQLFQLTKLKRLRADDNKLEFLSDKVENLRE 227
Query: 301 I-----SRSTFLKMTS-------LKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTR 348
+ S++ F +T LK LIL N+L L + + L HL L L+ L
Sbjct: 228 LTFLNLSKNLFKTITDNLCNCTMLKHLILCDNQLTQLPANI-DRLKHLKELSLSGNQLNS 286
Query: 349 LNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNET 408
L+E + H DL ++ LSGN L +P ++T TQI K D + N
Sbjct: 287 LDEQISH----LKDLSKIELSGNVLTYIP-----VELKTC-TQITKA-D------LSNNK 329
Query: 409 VFHENYTY---PDLEELRLSGNPLHVLPTG 435
+ Y DL+ L LSGN + L G
Sbjct: 330 LSQFPYALCALSDLKYLNLSGNSISELIPG 359
Score = 141 (54.7 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 107/375 (28%), Positives = 165/375 (44%)
Query: 21 TINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIE 80
T+ L N I+ + + +L L ++ L+++ P+ + L L L++S N L +
Sbjct: 26 TLLLQNNEIKTLRLNTVNLTNLEILILERNRLTQLPPEI-SLLHKLKVLNVSHNRLSCL- 83
Query: 81 PGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKL 140
P L +++ L LN N+ P A L L+TLEL+ NKLK+ D T+V ++ L
Sbjct: 84 PEELPKLVNIKELFLNHNNIDEF-PFA---LKSLETLELAGNKLKTLSD-TMV--DMKNL 136
Query: 141 DTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHL 200
L++ + IS P V L +L+L EN + L + L L +S+ L
Sbjct: 137 KVLNIDSNQISIFP-RVLCYLPNLVSLSLCENFIQSLPKDI---KGLKKLQEFSVSHNKL 192
Query: 201 KGPLSEDAFVNATKLRTLYLSGNPLS-AADLSVALKPLTKLH---RL------SLRNCG- 249
LS F TKL+ L N L +D L+ LT L+ L +L NC
Sbjct: 193 MF-LSVQLF-QLTKLKRLRADDNKLEFLSDKVENLRELTFLNLSKNLFKTITDNLCNCTM 250
Query: 250 ----------LSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQ 299
L++LPAN R L+EL +S N L ++ +S L+ L +++ + L
Sbjct: 251 LKHLILCDNQLTQLPAN-IDRLKHLKELSLSGNQL-NSLDEQISHLKDLSKIELSGNVLT 308
Query: 300 RISRSTFLKM-TSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENY 358
I LK T + LS NKL L L+ L L L+ ++ L +
Sbjct: 309 YIPVE--LKTCTQITKADLSNNKLSQFPYALCA-LSDLKYLNLSGNSISELIPGISD--- 362
Query: 359 TYPDLEELRLSGNPL 373
DLE L L+ N L
Sbjct: 363 -IKDLEHLELNKNKL 376
>TAIR|locus:2046515 [details] [associations]
symbol:RLP24 "receptor like protein 24" species:3702
"Arabidopsis thaliana" [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016301 "kinase activity" evidence=ISS] [GO:0007165 "signal
transduction" evidence=IC] Pfam:PF00560 InterPro:IPR001611
EMBL:CP002685 GenomeReviews:CT485783_GR eggNOG:COG4886
EMBL:AC003033 InterPro:IPR025875 Pfam:PF12799 EMBL:AC002334
HOGENOM:HOG000116562 ProtClustDB:CLSN2683406 IPI:IPI00532583
PIR:D84740 PIR:T01105 RefSeq:NP_180861.1 UniGene:At.66296
ProteinModelPortal:O49329 SMR:O49329 EnsemblPlants:AT2G33020.1
GeneID:817864 KEGG:ath:AT2G33020 TAIR:At2g33020 InParanoid:O49329
OMA:IHIDITS PhylomeDB:O49329 ArrayExpress:O49329
Genevestigator:O49329 Uniprot:O49329
Length = 864
Score = 207 (77.9 bits), Expect = 5.7e-13, P = 5.7e-13
Identities = 100/304 (32%), Positives = 135/304 (44%)
Query: 90 LEYLMLNRCNLTYIS-PSAFDNLNHLKTLELSQNKL--KSHID----WTLVLGNLGKLDT 142
L YL LNR N T S PS F NLN LK L L N SH D + LV NLGKL
Sbjct: 103 LRYLALNRNNFTSASLPSEFCNLNKLKLLSLFSNGFIDLSHNDLMGSFPLVR-NLGKLAV 161
Query: 143 LDLRQSGISNL--PDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHL 200
LDL + S P+N LR LNLA N I + + G NL L+ L LS
Sbjct: 162 LDLSDNHFSGTLNPNNSLFELHSLRYLNLAFNN-ISSSLPSKFG-NLNKLEVLSLSFNGF 219
Query: 201 KGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLR-NCGLSRLPANTFH 259
G N T++ LYL N L+ + V + LTKL L L N +P+ F
Sbjct: 220 SGQCFP-TISNLTRITQLYLHNNELTGSFPLV--QNLTKLSFLGLSDNLFSGTIPSYLF- 275
Query: 260 RFTCLQELDISHNPLIDAFTALLSPLES-LEHLDMGYSNLQRISRSTFLKMTSLKTLILS 318
F L LD+ N L + S S LE + +G+++L+ K+ +LK L LS
Sbjct: 276 TFPSLSTLDLRENDLSGSIEVPNSSTSSKLEIMYLGFNHLEGKILEPISKLINLKRLDLS 335
Query: 319 G-NKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLP 377
N ++ L L LS L+ + L+ + + +Y +E + LS + P
Sbjct: 336 FLNTSYPIDLNLLSPLKSLSYLDFSGNSLSPAS--LSSSSYIPLSMESIVLSLCGIREFP 393
Query: 378 DSTK 381
+ K
Sbjct: 394 NILK 397
Score = 173 (66.0 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 99/368 (26%), Positives = 155/368 (42%)
Query: 12 RNLDNPGLITINLN--ANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKL 69
RNL ++ ++ N + + P F + SL YL + +S P F NL L L
Sbjct: 154 RNLGKLAVLDLSDNHFSGTLNPNNSLFEL-HSLRYLNLAFNNISSSLPSKFGNLNKLEVL 212
Query: 70 DLSGNPLR-IIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHI 128
LS N P + + LT + L L+ LT P NL L L LS N I
Sbjct: 213 SLSFNGFSGQCFPTISN-LTRITQLYLHNNELTGSFPLV-QNLTKLSFLGLSDNLFSGTI 270
Query: 129 DWTLVLGNLGKLDTLDLRQSGISN---LPDNVFANNTWLRNLNLAENELIDLDVATTLGQ 185
L L TLDLR++ +S +P++ + ++ L + L N L + + + +
Sbjct: 271 PSYLF--TFPSLSTLDLRENDLSGSIEVPNS--STSSKLEIMYLGFNHL-EGKILEPISK 325
Query: 186 NLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALK-PLTKLHRLS 244
L++L LDLS + P+ + L L SGN LS A LS + PL+ + +
Sbjct: 326 -LINLKRLDLSFLNTSYPIDLNLLSPLKSLSYLDFSGNSLSPASLSSSSYIPLS-MESIV 383
Query: 245 LRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRI--S 302
L CG+ P N L +DI+ N + L L L +D+ ++ S
Sbjct: 384 LSLCGIREFP-NILKHLQNLIHIDITSNQIKGKIPEWLWTLPQLSFVDISNNSFNGFQGS 442
Query: 303 RSTFLKMTSLKTLILSGNKLE----TLESGLFQ-NLTHLSV---LELNNCGLTRLNET-V 353
F+ + S++ L+L N E TL + + H S + L+ C T L +
Sbjct: 443 AEVFVNL-SVRILMLDANNFEGALPTLPLSIIGFSAIHNSFTGEIPLSICNRTSLTMVDL 501
Query: 354 FHENYTYP 361
+ N+T P
Sbjct: 502 SYNNFTGP 509
>RGD|1307590 [details] [associations]
symbol:Flii "flightless I homolog (Drosophila)" species:10116
"Rattus norvegicus" [GO:0003779 "actin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0005813 "centrosome" evidence=IEA;ISO]
[GO:0007275 "multicellular organismal development"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007122 PRINTS:PR00597
PROSITE:PS51450 SMART:SM00262 RGD:1307590 GO:GO:0007275
GO:GO:0005634 GO:GO:0005737 GO:GO:0005813 eggNOG:COG4886
InterPro:IPR007123 PANTHER:PTHR11977 Pfam:PF00626 EMBL:CH473948
GeneTree:ENSGT00660000095502 HOGENOM:HOG000016110 OMA:MEEWNED
CTD:2314 HOVERGEN:HBG051627 OrthoDB:EOG4TB49G EMBL:BC085829
IPI:IPI00211698 RefSeq:NP_001008280.1 UniGene:Rn.144698
STRING:Q5RKI5 Ensembl:ENSRNOT00000006753 GeneID:287375
KEGG:rno:287375 UCSC:RGD:1307590 InParanoid:Q5RKI5 NextBio:625981
Genevestigator:Q5RKI5 Uniprot:Q5RKI5
Length = 1270
Score = 209 (78.6 bits), Expect = 5.9e-13, P = 5.9e-13
Identities = 97/343 (28%), Positives = 158/343 (46%)
Query: 41 SLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNL 100
SL +L + L + P+ L L L +S N L + G L SL ++ +L
Sbjct: 34 SLRWLKLNRTGLCYL-PEELAALQKLEHLSVSHNNLTTLH-GELSSLPSLRAIVARANSL 91
Query: 101 TYIS-PSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFA 159
P L+ L L+LS N+L + L N + L+L + I ++P+ +F
Sbjct: 92 KNSGVPDDIFKLDDLSVLDLSHNQLT---ECPRELENAKNMLVLNLSHNSIDSIPNQLFI 148
Query: 160 NNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLS-NCHLKGPLSEDAFVNATKLRTL 218
N T L L+L+EN L L + LVHL +L L+ N L L + + A L+TL
Sbjct: 149 NLTDLLYLDLSENRLESLPPQM---RRLVHLQTLVLNGNPLLHAQLRQLPAMMA--LQTL 203
Query: 219 YLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAF 278
+L + ++L +L+ L+ L + L L+R+P + L L++S N + +
Sbjct: 204 HLRNTQRTQSNLPTSLEGLSNLSDVDLSCNDLTRVP-ECLYTLPNLHRLNLSSNQIAE-L 261
Query: 279 TALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLET--LESGLFQNLTHL 336
+ + LE L++ + L + S K+T LK L L+ NKL+ L SG+ + LT L
Sbjct: 262 SLCIDQWVHLETLNLSRNQLTSLP-SAICKLTKLKKLYLNSNKLDFDGLPSGIGK-LTSL 319
Query: 337 SVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDS 379
N L + E++ P L +L L+ N L LP++
Sbjct: 320 EEFMAANNNLELIPESLCR----CPKLRKLVLNKNRLVTLPEA 358
Score = 203 (76.5 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 80/285 (28%), Positives = 133/285 (46%)
Query: 7 VYNDRRNLDNPGLITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTL 66
V +D LD+ L ++L+ N + A+++L L + ++ I Q F NLT L
Sbjct: 96 VPDDIFKLDD--LSVLDLSHNQLTECPRELENAKNMLVLNLSHNSIDSIPNQLFINLTDL 153
Query: 67 NKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKS 126
LDLS N L + P + L L+ L+LN L + + L+TL L +N ++
Sbjct: 154 LYLDLSENRLESLPPQM-RRLVHLQTLVLNGNPLLHAQLRQLPAMMALQTLHL-RNTQRT 211
Query: 127 HIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQN 186
+ L L L +DL + ++ +P+ ++ L LNL+ N++ +L +
Sbjct: 212 QSNLPTSLEGLSNLSDVDLSCNDLTRVPECLYTLPN-LHRLNLSSNQIAELSLCI---DQ 267
Query: 187 LVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLR 246
VHL++L+LS L S A TKL+ LYL+ N L L + LT L
Sbjct: 268 WVHLETLNLSRNQLTSLPS--AICKLTKLKKLYLNSNKLDFDGLPSGIGKLTSLEEFMAA 325
Query: 247 NCGLSRLPANTFHRFTCLQELDISHNPLIDAFTAL--LSPLESLE 289
N L +P + R L++L ++ N L+ A+ L+ +E L+
Sbjct: 326 NNNLELIP-ESLCRCPKLRKLVLNKNRLVTLPEAIHFLTEIEVLD 369
Score = 177 (67.4 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 99/337 (29%), Positives = 157/337 (46%)
Query: 69 LDLSGNPLRI-IEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKS- 126
+DLSGN + P +TSL +L LNR L Y+ P L L+ L +S N L +
Sbjct: 13 VDLSGNDFKGGYFPENVKAMTSLRWLKLNRTGLCYL-PEELAALQKLEHLSVSHNNLTTL 71
Query: 127 HIDWTLVLGNLGKLDTLDLRQSGISN--LPDNVFANNTWLRNLNLAENELID----LDVA 180
H + L +L L + R + + N +PD++F + L L+L+ N+L + L+ A
Sbjct: 72 HGE----LSSLPSLRAIVARANSLKNSGVPDDIFKLDD-LSVLDLSHNQLTECPRELENA 126
Query: 181 TT-LGQNLVH--LDSL------DLSNCHLKGPLSEDAFVNA-------TKLRTLYLSGNP 224
L NL H +DS+ +L++ L LSE+ + L+TL L+GNP
Sbjct: 127 KNMLVLNLSHNSIDSIPNQLFINLTDL-LYLDLSENRLESLPPQMRRLVHLQTLVLNGNP 185
Query: 225 LSAADLSVALKPLTKLHRLSLRNCGLSRLPANT-FHRFTCLQELDISHNPLIDAFTALLS 283
L A L L + L L LRN ++ T + L ++D+S N L L +
Sbjct: 186 LLHAQLR-QLPAMMALQTLHLRNTQRTQSNLPTSLEGLSNLSDVDLSCNDLTRVPECLYT 244
Query: 284 PLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNN 343
L +L L++ + + +S + L+TL LS N+L +L S + + LT L L LN+
Sbjct: 245 -LPNLHRLNLSSNQIAELSLCID-QWVHLETLNLSRNQLTSLPSAICK-LTKLKKLYLNS 301
Query: 344 CGLTRLNETVFHENY-TYPDLEELRLSGNPLHVLPDS 379
+L+ LEE + N L ++P+S
Sbjct: 302 ---NKLDFDGLPSGIGKLTSLEEFMAANNNLELIPES 335
Score = 175 (66.7 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 92/356 (25%), Positives = 157/356 (44%)
Query: 22 INLNANPIQPVEGAFLVARSLLYLYMQECTLSKIN-PQFFTNLTTLNKLDLSGNPLRIIE 80
++++ N + + G SL + + +L P L L+ LDLS N L
Sbjct: 61 LSVSHNNLTTLHGELSSLPSLRAIVARANSLKNSGVPDDIFKLDDLSVLDLSHNQLTEC- 119
Query: 81 PGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKL 140
P + ++ L L+ ++ I F NL L L+LS+N+L+S + L L
Sbjct: 120 PRELENAKNMLVLNLSHNSIDSIPNQLFINLTDLLYLDLSENRLES---LPPQMRRLVHL 176
Query: 141 DTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHL 200
TL L + + + L+ L+L + ++ T+L + L +L +DLS C+
Sbjct: 177 QTLVLNGNPLLHAQLRQLPAMMALQTLHLRNTQRTQSNLPTSL-EGLSNLSDVDLS-CND 234
Query: 201 KGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHR 260
+ E + L L LS N + A+LS+ + L L+L L+ LP+ +
Sbjct: 235 LTRVPECLYT-LPNLHRLNLSSNQI--AELSLCIDQWVHLETLNLSRNQLTSLPS-AICK 290
Query: 261 FTCLQELDISHNPL-IDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSG 319
T L++L ++ N L D + + L SLE +NL+ I S + L+ L+L+
Sbjct: 291 LTKLKKLYLNSNKLDFDGLPSGIGKLTSLEEFMAANNNLELIPES-LCRCPKLRKLVLNK 349
Query: 320 NKLETLESGLFQNLTHLSVLELN-NCGLTRLNETVFHE----NYTYPDLEELRLSG 370
N+L TL + LT + VL++ N L + H N + +LRL+G
Sbjct: 350 NRLVTLPEAI-HFLTEIEVLDVRENPSLVMPPKPADHTAEWYNIDFSLQNQLRLAG 404
>UNIPROTKB|E2RA12 [details] [associations]
symbol:PHLPP2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003824 "catalytic activity" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR001932 Pfam:PF00481
PROSITE:PS51450 SMART:SM00332 GO:GO:0003824 Gene3D:2.30.29.30
InterPro:IPR011993 InterPro:IPR003591 SMART:SM00369 GO:GO:0008152
InterPro:IPR025875 Pfam:PF12799 Gene3D:3.60.40.10 SUPFAM:SSF81606
GeneTree:ENSGT00440000037833 OMA:DLSCYSL EMBL:AAEX03004086
Ensembl:ENSCAFT00000032153 Uniprot:E2RA12
Length = 1348
Score = 209 (78.6 bits), Expect = 6.3e-13, P = 6.3e-13
Identities = 123/485 (25%), Positives = 212/485 (43%)
Query: 21 TINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNL---TTLNKLDLSGNPLR 77
T++L+ ++ V ++ + YL ++ + P L + L L+LS N L
Sbjct: 278 TVDLSCYSLEEVPEHLFYSQDITYLNLRHNFMQLERPGGLDTLYRFSQLKGLNLSHNKLG 337
Query: 78 IIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNL 137
+ P + +++L L L+ CN + PS +L +L+TL L N L + + LGNL
Sbjct: 338 LF-PVLLCEISTLTELNLS-CNGFHDLPSQIGSLLNLQTLCLDGNFLTTLPE---ELGNL 392
Query: 138 GKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSN 197
+L +L + + S +P+ V+ T L + +A N L L++ + H+ +DL
Sbjct: 393 QQLSSLGISFNNFSQIPE-VYGKLTMLDKVVMAGNCLKVLNLGVL--NRMSHIRHVDLRM 449
Query: 198 CHLKGPLSEDAFVNATKLRT-LYLSGNPLSAADLSVALKPLTKLH--RLSLRNCGLSRLP 254
LK ++E+ + K T + L N L+ DLS +L L +LH R LR LS
Sbjct: 450 NLLKTVVTEN--LEGNKYITHMDLRDNQLADLDLS-SLCSLEQLHCERNQLRELTLSGFS 506
Query: 255 ANTFH----RFTC---------LQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRI 301
T + R T L L++S N L++ + +E LD+ Y+ L +
Sbjct: 507 LRTLYASSNRLTAVNVYPVPSQLTSLELSRN-LLECVPDWACEAKKMEVLDVSYNLLTEV 565
Query: 302 SRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYP 361
L SL+ L ++ N+L++L L +++ L VL++ + LTRL +T+F +
Sbjct: 566 PMR-ILSSLSLRKLTVAHNQLQSLPM-LVEHIP-LEVLDIQHNLLTRLPDTLFSKAL--- 619
Query: 362 DLEELRLSGNPLHVLPD-STKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTYPDLE 420
+L L S N L LP S + S+ + N +L + +P L
Sbjct: 620 NLRYLNASANSLESLPSASAGEESLSALQLLYLTNN-------LLTDQCVPVLVGHPHLR 672
Query: 421 ELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNLS 480
L L+ N L P K+ +P + N R + +L +NN+S
Sbjct: 673 ILHLANNQLQTFPASKLNKLEQLEELNLSGN--KLKTIPTTIANCKR-LHTLVAHSNNIS 729
Query: 481 MTSEL 485
+ E+
Sbjct: 730 IFPEI 734
Score = 188 (71.2 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 89/335 (26%), Positives = 153/335 (45%)
Query: 41 SLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNL 100
SL LY L+ +N + + L L+LS N L + P +E L ++ L
Sbjct: 506 SLRTLYASSNRLTAVN--VYPVPSQLTSLELSRNLLECV-PDWACEAKKMEVLDVSYNLL 562
Query: 101 TYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFAN 160
T + +L+ L+ L ++ N+L+S +++ ++ L+ LD++ + ++ LPD +F+
Sbjct: 563 TEVPMRILSSLS-LRKLTVAHNQLQS---LPMLVEHI-PLEVLDIQHNLLTRLPDTLFSK 617
Query: 161 NTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYL 220
LR LN + N L L A+ ++L L L L+N +L V LR L+L
Sbjct: 618 ALNLRYLNASANSLESLPSASAGEESLSALQLLYLTN-NLLTDQCVPVLVGHPHLRILHL 676
Query: 221 SGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTA 280
+ N L S L L +L L+L L +P T L L ++H+ I F
Sbjct: 677 ANNQLQTFPAS-KLNKLEQLEELNLSGNKLKTIPT-TIANCKRLHTL-VAHSNNISIFPE 733
Query: 281 LLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLE 340
+L L ++ +D+ ++L I L T L+ L L+GN LE +H++ L+
Sbjct: 734 ILQ-LPQIQFVDLSCNDLTEILIPEALPAT-LQDLDLTGNTNLVLEHKTLDTFSHITTLK 791
Query: 341 LNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHV 375
++ L + TV +++ L E+ N L V
Sbjct: 792 IDQKPLPTTDSTVTSTFWSH-GLAEMAGQRNKLCV 825
Score = 176 (67.0 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 95/374 (25%), Positives = 166/374 (44%)
Query: 19 LITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRI 78
L +NL+ N + +L L + L+ + P+ NL L+ L +S N
Sbjct: 349 LTELNLSCNGFHDLPSQIGSLLNLQTLCLDGNFLTTL-PEELGNLQQLSSLGISFNNFSQ 407
Query: 79 IEPGVFDPLTSLE-YLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNL 137
I P V+ LT L+ +M C L ++ + ++H++ ++L N LK+ + L GN
Sbjct: 408 I-PEVYGKLTMLDKVVMAGNC-LKVLNLGVLNRMSHIRHVDLRMNLLKTVVTENLE-GNK 464
Query: 138 GKLDTLDLRQSGISNLP-------DNVFANNTWLRNLNLAENELIDLDVATT--LGQNLV 188
+ +DLR + +++L + + LR L L+ L L ++ N+
Sbjct: 465 -YITHMDLRDNQLADLDLSSLCSLEQLHCERNQLRELTLSGFSLRTLYASSNRLTAVNVY 523
Query: 189 HLDSLDLSNCHLKGPLSE---DAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSL 245
+ S L++ L L E D A K+ L +S N L+ + + L L+ L +L++
Sbjct: 524 PVPS-QLTSLELSRNLLECVPDWACEAKKMEVLDVSYNLLTEVPMRI-LSSLS-LRKLTV 580
Query: 246 RNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRST 305
+ L LP H L+ LDI HN L L S +L +L+ ++L+ + ++
Sbjct: 581 AHNQLQSLPMLVEH--IPLEVLDIQHNLLTRLPDTLFSKALNLRYLNASANSLESLPSAS 638
Query: 306 FLK--MTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDL 363
+ +++L+ L L+ N L + HL +L L N L + ++ L
Sbjct: 639 AGEESLSALQLLYLTNNLLTDQCVPVLVGHPHLRILHLANNQLQTFPASKLNK---LEQL 695
Query: 364 EELRLSGNPLHVLP 377
EEL LSGN L +P
Sbjct: 696 EELNLSGNKLKTIP 709
>UNIPROTKB|Q6NUI6 [details] [associations]
symbol:CHADL "Chondroadherin-like protein" species:9606
"Homo sapiens" [GO:0005578 "proteinaceous extracellular matrix"
evidence=IEA] [GO:0031012 "extracellular matrix" evidence=ISS]
InterPro:IPR001611 PROSITE:PS51450 EMBL:CH471095 GO:GO:0005578
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR000372 SMART:SM00013 EMBL:AL035681 EMBL:BC012882
EMBL:BC019839 EMBL:BC040188 EMBL:BC048421 EMBL:BC068590
IPI:IPI00402280 IPI:IPI00855816 RefSeq:NP_612490.1
UniGene:Hs.344488 HSSP:Q9BZR6 ProteinModelPortal:Q6NUI6 SMR:Q6NUI6
DMDM:158563972 PaxDb:Q6NUI6 PRIDE:Q6NUI6 Ensembl:ENST00000216241
GeneID:150356 KEGG:hsa:150356 UCSC:uc003azq.4 UCSC:uc010gyj.3
CTD:150356 GeneCards:GC22M041625 HGNC:HGNC:25165 HPA:HPA005696
HPA:HPA024654 neXtProt:NX_Q6NUI6 PharmGKB:PA162382224
eggNOG:NOG318740 HOGENOM:HOG000111626 HOVERGEN:HBG095510
InParanoid:Q6NUI6 OMA:ICDNSRR GenomeRNAi:150356 NextBio:86414
ArrayExpress:Q6NUI6 Bgee:Q6NUI6 CleanEx:HS_CHADL
Genevestigator:Q6NUI6 Uniprot:Q6NUI6
Length = 762
Score = 187 (70.9 bits), Expect = 9.9e-13, Sum P(2) = 9.9e-13
Identities = 71/236 (30%), Positives = 103/236 (43%)
Query: 143 LDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKG 202
LDLR++ ++P F L +L+L + +L+ G L L L LS+ L G
Sbjct: 430 LDLRRNHFPSVPRAAFPGLGHLVSLHLQHCGIAELEAGALAG--LGRLIYLYLSDNQLAG 487
Query: 203 PLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFT 262
LS A A +L LYL N AL+ L L L L++ + RL R
Sbjct: 488 -LSAAALEGAPRLGYLYLERNRFLQVP-GAALRALPSLFSLHLQDNAVDRLAPGDLGRTR 545
Query: 263 CLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKL 322
L+ + +S N + + L P LE L + + L+ + + +L L LSGN L
Sbjct: 546 ALRWVYLSGNRITEVSLGALGPARELEKLHLDRNQLREVPTGALEGLPALLELQLSGNPL 605
Query: 323 ETLESGLFQNLTH-LSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLP 377
L G FQ + L L LN+ GL ++ F + P L+ L L N L LP
Sbjct: 606 RALRDGAFQPVGRSLQHLFLNSSGLEQICPGAF--SGLGPGLQSLHLQKNQLRALP 659
Score = 166 (63.5 bits), Expect = 6.7e-13, Sum P(3) = 6.7e-13
Identities = 74/243 (30%), Positives = 100/243 (41%)
Query: 17 PGLITINLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNP 75
P L ++L ++ V EGAF LL L + L ++ + L +L +L+L GN
Sbjct: 86 PHLTHLDLRHCEVELVAEGAFRGLGRLLLLNLASNHLRELPQEALDGLGSLRRLELEGNA 145
Query: 76 LRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLG 135
L + PG F L +L L L L Y+ AF L ++ L LS N L + L
Sbjct: 146 LEELRPGTFGALGALATLNLAHNALVYLPAMAFQGLLRVRWLRLSHNALS--VLAPEALA 203
Query: 136 NLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDL 195
L L L L + + LP V + L L L N L L L L L L
Sbjct: 204 GLPALRRLSLHHNELQALPGPVLSQARGLARLELGHNPLTYAGEEDGLA--LPGLRELLL 261
Query: 196 SNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRN----CGLS 251
L+ L AF + +L TL L GN L D L+ +L RL L+ CG
Sbjct: 262 DGGALQA-LGPRAFAHCPRLHTLDLRGNQL---DTLPPLQGPGQLRRLRLQGNPLWCGCQ 317
Query: 252 RLP 254
P
Sbjct: 318 ARP 320
Score = 166 (63.5 bits), Expect = 5.8e-10, Sum P(3) = 5.8e-10
Identities = 73/228 (32%), Positives = 100/228 (43%)
Query: 99 NLTYISPSA-FDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNV 157
NL + P+A F + HL L+L +++ + LG+L L+L + + LP
Sbjct: 72 NLLKVIPAAAFQGVPHLTHLDLRHCEVELVAEGAF--RGLGRLLLLNLASNHLRELPQEA 129
Query: 158 FANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRT 217
LR L L N L +L T G L L +L+L++ L L AF ++R
Sbjct: 130 LDGLGSLRRLELEGNALEELRPGT-FGA-LGALATLNLAHNALVY-LPAMAFQGLLRVRW 186
Query: 218 LYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDA 277
L LS N LS AL L L RLSL + L LP + L L++ HNPL A
Sbjct: 187 LRLSHNALSVL-APEALAGLPALRRLSLHHNELQALPGPVLSQARGLARLELGHNPLTYA 245
Query: 278 FTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETL 325
L L L + LQ + F L TL L GN+L+TL
Sbjct: 246 GEEDGLALPGLRELLLDGGALQALGPRAFAHCPRLHTLDLRGNQLDTL 293
Score = 163 (62.4 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
Identities = 69/255 (27%), Positives = 113/255 (44%)
Query: 91 EYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGI 150
+ L L R + + +AF L HL +L L + + ++ + G LG+L L L + +
Sbjct: 428 QLLDLRRNHFPSVPRAAFPGLGHLVSLHLQHCGI-AELEAGALAG-LGRLIYLYLSDNQL 485
Query: 151 SNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFV 210
+ L L L L N + + A + L L SL L + + L+
Sbjct: 486 AGLSAAALEGAPRLGYLYLERNRFLQVPGAAL--RALPSLFSLHLQD-NAVDRLAPGDLG 542
Query: 211 NATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDIS 270
LR +YLSGN ++ L AL P +L +L L L +P L EL +S
Sbjct: 543 RTRALRWVYLSGNRITEVSLG-ALGPARELEKLHLDRNQLREVPTGALEGLPALLELQLS 601
Query: 271 HNPLIDAFTALLSPL-ESLEHLDMGYSNLQRISRSTFLKM-TSLKTLILSGNKLETLESG 328
NPL P+ SL+HL + S L++I F + L++L L N+L L +
Sbjct: 602 GNPLRALRDGAFQPVGRSLQHLFLNSSGLEQICPGAFSGLGPGLQSLHLQKNQLRALPA- 660
Query: 329 LFQNLTHLSVLELNN 343
+L+ L +++L++
Sbjct: 661 -LPSLSQLELIDLSS 674
Score = 160 (61.4 bits), Expect = 2.6e-09, Sum P(3) = 2.6e-09
Identities = 64/231 (27%), Positives = 98/231 (42%)
Query: 146 RQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLS 205
R ++ +PD + T + L+L N L + A Q + HL LDL +C ++ ++
Sbjct: 49 RYQNLTEVPDAI-PELT--QRLDLQGNLLKVIPAAAF--QGVPHLTHLDLRHCEVE-LVA 102
Query: 206 EDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQ 265
E AF +L L L+ N L AL L L RL L L L TF L
Sbjct: 103 EGAFRGLGRLLLLNLASNHLRELPQE-ALDGLGSLRRLELEGNALEELRPGTFGALGALA 161
Query: 266 ELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETL 325
L+++HN L+ L + L + ++ L ++ + +L+ L L N+L+ L
Sbjct: 162 TLNLAHNALVYLPAMAFQGLLRVRWLRLSHNALSVLAPEALAGLPALRRLSLHHNELQAL 221
Query: 326 ESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVL 376
+ L+ LEL + LT E + P L EL L G L L
Sbjct: 222 PGPVLSQARGLARLELGHNPLTYAGE---EDGLALPGLRELLLDGGALQAL 269
Score = 154 (59.3 bits), Expect = 1.4e-11, Sum P(3) = 1.4e-11
Identities = 60/189 (31%), Positives = 79/189 (41%)
Query: 57 PQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKT 116
P LT +LDL GN L++I F + L +L L C + ++ AF L L
Sbjct: 57 PDAIPELT--QRLDLQGNLLKVIPAAAFQGVPHLTHLDLRHCEVELVAEGAFRGLGRLLL 114
Query: 117 LELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELID 176
L L+ N L+ L LG L L+L + + L F L LNLA N L+
Sbjct: 115 LNLASNHLRELPQEAL--DGLGSLRRLELEGNALEELRPGTFGALGALATLNLAHNALVY 172
Query: 177 LDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKP 236
L Q L+ + L LS+ L L+ +A LR L L N L A V L
Sbjct: 173 LPAMAF--QGLLRVRWLRLSHNALS-VLAPEALAGLPALRRLSLHHNELQALPGPV-LSQ 228
Query: 237 LTKLHRLSL 245
L RL L
Sbjct: 229 ARGLARLEL 237
Score = 151 (58.2 bits), Expect = 7.7e-09, Sum P(2) = 7.7e-09
Identities = 68/246 (27%), Positives = 98/246 (39%)
Query: 185 QNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLS 244
Q + HL LDL +C ++ ++E AF +L L L+ N L AL L L RL
Sbjct: 83 QGVPHLTHLDLRHCEVE-LVAEGAFRGLGRLLLLNLASNHLRELPQE-ALDGLGSLRRLE 140
Query: 245 LRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRS 304
L L L TF L L+++HN L+ L + L + ++ L ++
Sbjct: 141 LEGNALEELRPGTFGALGALATLNLAHNALVYLPAMAFQGLLRVRWLRLSHNALSVLAPE 200
Query: 305 TFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLE 364
+ +L+ L L N+L+ L + L+ LEL + LT E + P L
Sbjct: 201 ALAGLPALRRLSLHHNELQALPGPVLSQARGLARLELGHNPLTYAGE---EDGLALPGLR 257
Query: 365 ELRLSGNPLHVLPDSTKQYSMRTIPTQIWKN-FDFLVILFILNETVFHENYTYPDLEELR 423
EL L G L L + R + N D L L + L LR
Sbjct: 258 ELLLDGGALQALGPRAFAHCPRLHTLDLRGNQLDTLPPLQGPGQ-----------LRRLR 306
Query: 424 LSGNPL 429
L GNPL
Sbjct: 307 LQGNPL 312
Score = 140 (54.3 bits), Expect = 4.4e-10, Sum P(3) = 4.4e-10
Identities = 72/234 (30%), Positives = 90/234 (38%)
Query: 52 LSKINPQF-FTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDN 110
L K+ P F + L LDL + ++ G F L L L L +L + A D
Sbjct: 73 LLKVIPAAAFQGVPHLTHLDLRHCEVELVAEGAFRGLGRLLLLNLASNHLRELPQEALDG 132
Query: 111 LNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLA 170
L L+ LEL N L+ T G LG L TL+L + + LP F +R L L+
Sbjct: 133 LGSLRRLELEGNALEELRPGTF--GALGALATLNLAHNALVYLPAMAFQGLLRVRWLRLS 190
Query: 171 ENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADL 230
N L L G L L L L + L+ L A L L L NPL+ A
Sbjct: 191 HNALSVLAPEALAG--LPALRRLSLHHNELQA-LPGPVLSQARGLARLELGHNPLTYAGE 247
Query: 231 SVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSP 284
L L L L L L L F L LD+ N L D L P
Sbjct: 248 EDGLA-LPGLRELLLDGGALQALGPRAFAHCPRLHTLDLRGNQL-DTLPPLQGP 299
Score = 139 (54.0 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 55/184 (29%), Positives = 85/184 (46%)
Query: 17 PGLITINLNANPIQPVEGAFLVAR-SLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNP 75
P L + L N V GA L A SL L++Q+ + ++ P L + LSGN
Sbjct: 497 PRLGYLYLERNRFLQVPGAALRALPSLFSLHLQDNAVDRLAPGDLGRTRALRWVYLSGNR 556
Query: 76 LRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLG 135
+ + G P LE L L+R L + A + L L L+LS N L++ D
Sbjct: 557 ITEVSLGALGPARELEKLHLDRNQLREVPTGALEGLPALLELQLSGNPLRALRDGAFQ-- 614
Query: 136 NLGK-LDTLDLRQSGISNLPDNVFAN-NTWLRNLNLAENELIDLDVATTLGQNLVHLDSL 193
+G+ L L L SG+ + F+ L++L+L +N+L L +L Q L+ +
Sbjct: 615 PVGRSLQHLFLNSSGLEQICPGAFSGLGPGLQSLHLQKNQLRALPALPSLSQ----LELI 670
Query: 194 DLSN 197
DLS+
Sbjct: 671 DLSS 674
Score = 111 (44.1 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 72/282 (25%), Positives = 107/282 (37%)
Query: 193 LDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSR 252
LDL H + AF L +L+L ++ + AL L +L L L + L+
Sbjct: 430 LDLRRNHFPS-VPRAAFPGLGHLVSLHLQHCGIAELEAG-ALAGLGRLIYLYLSDNQLAG 487
Query: 253 LPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSL 312
L A L L + N + A L L SL L + + + R++ + +L
Sbjct: 488 LSAAALEGAPRLGYLYLERNRFLQVPGAALRALPSLFSLHLQDNAVDRLAPGDLGRTRAL 547
Query: 313 KTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNP 372
+ + LSGN++ + G L L L+ +L E P L EL+LSGNP
Sbjct: 548 RWVYLSGNRITEVSLGALGPARELEKLHLDR---NQLREVPTGALEGLPALLELQLSGNP 604
Query: 373 LHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTYPDLEELRLSGNPLHVL 432
L L D Q R++ ++ N L + F + P L+ L L N L L
Sbjct: 605 LRALRDGAFQPVGRSLQ-HLFLNSSGLEQIC---PGAF--SGLGPGLQSLHLQKNQLRAL 658
Query: 433 PTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNL 474
P C LP + R +T LNL
Sbjct: 659 PALPSLSQLELIDLSSNPFHCDCQLLPLH-----RWLTGLNL 695
Score = 109 (43.4 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 71/260 (27%), Positives = 107/260 (41%)
Query: 19 LITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRI 78
L+ + N P P AF L+ L++Q C ++++ L L L LS N L
Sbjct: 429 LLDLRRNHFPSVP-RAAFPGLGHLVSLHLQHCGIAELEAGALAGLGRLIYLYLSDNQLAG 487
Query: 79 IEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLG 138
+ + L YL L R + +A L L +L L N +D L G+LG
Sbjct: 488 LSAAALEGAPRLGYLYLERNRFLQVPGAALRALPSLFSLHLQDNA----VD-RLAPGDLG 542
Query: 139 KLDTLD-LRQSG--ISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDL 195
+ L + SG I+ + L L+L N+L +V T + L L L L
Sbjct: 543 RTRALRWVYLSGNRITEVSLGALGPARELEKLHLDRNQL--REVPTGALEGLPALLELQL 600
Query: 196 SNCHLKGPLSEDAFVNATK-LRTLYLSGNPLSAADLSVALKPLTK-LHRLSLRNCGLSRL 253
S L+ L + AF + L+ L+L+ + L A L L L L+ L L
Sbjct: 601 SGNPLRA-LRDGAFQPVGRSLQHLFLNSSGLEQI-CPGAFSGLGPGLQSLHLQKNQLRAL 658
Query: 254 PANTFHRFTCLQELDISHNP 273
PA + L+ +D+S NP
Sbjct: 659 PA--LPSLSQLELIDLSSNP 676
Score = 67 (28.6 bits), Expect = 6.7e-13, Sum P(3) = 6.7e-13
Identities = 64/304 (21%), Positives = 100/304 (32%)
Query: 244 SLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISR 303
S CGL +P F T L +L +H P + A L L L + + + +
Sbjct: 410 SCEGCGLQAVPRG-FPSDTQLLDLRRNHFPSVPR--AAFPGLGHLVSLHLQHCGIAELEA 466
Query: 304 STFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDL 363
+ L L LS N+L L + + L L L ++ P L
Sbjct: 467 GALAGLGRLIYLYLSDNQLAGLSAAALEGAPRLGYLYLERNRFLQVPGAALR---ALPSL 523
Query: 364 EELRLSGNPLHVL-P-DSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTYPDLEE 421
L L N + L P D + ++R + + N V L L +LE+
Sbjct: 524 FSLHLQDNAVDRLAPGDLGRTRALRWV--YLSGNRITEVSLGALGPA--------RELEK 573
Query: 422 LRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNT-RNITSLNLANNNLS 480
L L N L +PTG + L F R++ L L ++ L
Sbjct: 574 LHLDRNQLREVPTGALEGLPALLELQLSGNPLRA--LRDGAFQPVGRSLQHLFLNSSGLE 631
Query: 481 MTSELSFQFXXXXXXXXXXXXXXXXXTHISPTVLRHNRAITSIKLVGNPWKCDCNIADMW 540
+F P++ + + I L NP+ CDC + +
Sbjct: 632 QICPGAFSGLGPGLQSLHLQKNQLRALPALPSLSQ----LELIDLSSNPFHCDCQLLPLH 687
Query: 541 EWAT 544
W T
Sbjct: 688 RWLT 691
Score = 66 (28.3 bits), Expect = 6.7e-13, Sum P(3) = 6.7e-13
Identities = 23/92 (25%), Positives = 34/92 (36%)
Query: 523 IKLVGNPWKCDCNIADMWEWATREKGDIGVLVGSTTPTEIGFGASRKKKGLVCYFDIFTT 582
I L NP+ CDC + + W T + + VG+T T R K + D
Sbjct: 670 IDLSSNPFHCDCQLLPLHRWLT----GLNLRVGATCATPPNARGQRVKAAAAVFEDCPGW 725
Query: 583 PTRKRPGRELFASTNKTWARYVKEADCPSSKL 614
RK + AS +K C + K+
Sbjct: 726 AARK--AKRTPASRPSARRTPIKGRQCGADKV 755
Score = 55 (24.4 bits), Expect = 7.4e-09, Sum P(3) = 7.4e-09
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 523 IKLVGNPWKCDCNIADMWEWATREK 547
++L GNP C C + EW R +
Sbjct: 305 LRLQGNPLWCGCQARPLLEWLARAR 329
Score = 38 (18.4 bits), Expect = 5.8e-10, Sum P(3) = 5.8e-10
Identities = 9/17 (52%), Positives = 9/17 (52%)
Query: 417 PDLEELRLSGNPLHVLP 433
P L L L GN L LP
Sbjct: 278 PRLHTLDLRGNQLDTLP 294
>TAIR|locus:2047530 [details] [associations]
symbol:AT2G24230 species:3702 "Arabidopsis thaliana"
[GO:0004672 "protein kinase activity" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005886 "plasma
membrane" evidence=ISM] [GO:0006468 "protein phosphorylation"
evidence=IEA;ISS] [GO:0007169 "transmembrane receptor protein
tyrosine kinase signaling pathway" evidence=ISS] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000719
InterPro:IPR001245 InterPro:IPR011009 Pfam:PF07714 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 PROSITE:PS51450 GO:GO:0016021
GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
SUPFAM:SSF56112 GO:GO:0004674 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 Gene3D:2.60.120.200 InterPro:IPR013320 EMBL:AC005967
InterPro:IPR025875 Pfam:PF12799 HOGENOM:HOG000116551 EMBL:AY093187
EMBL:FJ708699 IPI:IPI00538206 PIR:B84634 RefSeq:NP_850049.1
UniGene:At.44784 ProteinModelPortal:C0LGK9 SMR:C0LGK9 PaxDb:C0LGK9
PRIDE:C0LGK9 EnsemblPlants:AT2G24230.1 GeneID:816957
KEGG:ath:AT2G24230 GeneFarm:619 TAIR:At2g24230 InParanoid:Q8RWC6
OMA:IAIYEYM PhylomeDB:C0LGK9 ProtClustDB:CLSN2687596 Uniprot:C0LGK9
Length = 853
Score = 198 (74.8 bits), Expect = 7.5e-13, Sum P(2) = 7.5e-13
Identities = 96/312 (30%), Positives = 148/312 (47%)
Query: 69 LDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHI 128
+ LSG I L+ L+ L L+ ++ + PS F +LN LK L LS NK+
Sbjct: 77 MSLSGQ----IPDNTIGKLSKLQSLDLSNNKISAL-PSDFWSLNTLKNLNLSFNKISG-- 129
Query: 129 DWTLVLGNLGKLDTLDLRQSGISN-LPDNVFANNTWLRNLNLAENELIDLDVAT-TLG-Q 185
++ +GN G+L+ LD+ + S +P+ V + + LR L L N + + LG Q
Sbjct: 130 SFSSNVGNFGQLELLDISYNNFSGAIPEAVDSLVS-LRVLKLDHNGF-QMSIPRGLLGCQ 187
Query: 186 NLVHLDSLDLSNCHLKGPLSEDAFVNA-TKLRTLYLSGNPLSAADLSVALKPLTKLHRLS 244
+LV S+DLS+ L+G L D F +A KL TL L+GN + D A + +S
Sbjct: 188 SLV---SIDLSSNQLEGSLP-DGFGSAFPKLETLSLAGNKIHGRDTDFA-----DMKSIS 238
Query: 245 LRNCGLSRLPANTFHRFT-CLQELDISHNPLIDAFTALL-SPLESLEHLDMGYSNLQRIS 302
N ++ + F L+ D+S N ++ + S SL +LD+ + L +
Sbjct: 239 FLNISGNQFDGSVTGVFKETLEVADLSKNRFQGHISSQVDSNWFSLVYLDLSENELSGVI 298
Query: 303 RS-TFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYP 361
++ T LK LK L L+ N+ G+F + LS LE N T L+ + E
Sbjct: 299 KNLTLLK--KLKHLNLAWNRFNR---GMFPRIEMLSGLEYLNLSNTNLSGHIPREISKLS 353
Query: 362 DLEELRLSGNPL 373
DL L +SGN L
Sbjct: 354 DLSTLDVSGNHL 365
Score = 126 (49.4 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 43/135 (31%), Positives = 65/135 (48%)
Query: 41 SLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPL-RIIEPGVFDPLTSLEYLMLNRCN 99
SL+YL + E LS + T L L L+L+ N R + P + + L+ LEYL L+ N
Sbjct: 283 SLVYLDLSENELSGVIKNL-TLLKKLKHLNLAWNRFNRGMFPRI-EMLSGLEYLNLSNTN 340
Query: 100 LTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFA 159
L+ P L+ L TL++S N L HI L + NL +D R + +P ++
Sbjct: 341 LSGHIPREISKLSDLSTLDVSGNHLAGHIP-ILSIKNLVAIDVS--RNNLTGEIPMSILE 397
Query: 160 NNTWLRNLNLAENEL 174
W+ N + N L
Sbjct: 398 KLPWMERFNFSFNNL 412
Score = 121 (47.7 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 83/323 (25%), Positives = 132/323 (40%)
Query: 2 WQGHPVYNDRRNLDNPGLITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFT 61
WQG ++ D +N LI ++ + P + L L + +S + P F
Sbjct: 57 WQG--LFCDSKNEHVIMLIASGMSLSGQIP-DNTIGKLSKLQSLDLSNNKISAL-PSDFW 112
Query: 62 NLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQ 121
+L TL L+LS N + LE L ++ N + P A D+L L+ L+L
Sbjct: 113 SLNTLKNLNLSFNKISGSFSSNVGNFGQLELLDISYNNFSGAIPEAVDSLVSLRVLKLDH 172
Query: 122 NKLKSHIDWTLVLGNLGKLDTLDLRQSGIS-NLPDNVFANNTWLRNLNLAENELIDLDVA 180
N + I L LG L ++DL + + +LPD + L L+LA N++ D
Sbjct: 173 NGFQMSIPRGL-LG-CQSLVSIDLSSNQLEGSLPDGFGSAFPKLETLSLAGNKIHGRD-- 228
Query: 181 TTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKL 240
T ++ + L++S G ++ V L LS N S L
Sbjct: 229 -TDFADMKSISFLNISGNQFDGSVTG---VFKETLEVADLSKNRFQGHISSQVDSNWFSL 284
Query: 241 HRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQ- 299
L L LS + N L+ L+++ N + L LE+L++ +NL
Sbjct: 285 VYLDLSENELSGVIKN-LTLLKKLKHLNLAWNRFNRGMFPRIEMLSGLEYLNLSNTNLSG 343
Query: 300 RISRSTFLKMTSLKTLILSGNKL 322
I R K++ L TL +SGN L
Sbjct: 344 HIPRE-ISKLSDLSTLDVSGNHL 365
Score = 57 (25.1 bits), Expect = 7.5e-13, Sum P(2) = 7.5e-13
Identities = 22/95 (23%), Positives = 37/95 (38%)
Query: 562 IGFGASRKKKGLVCYFDIFTTPTRKRPGRELFASTNKTWARYVKEADCPSSKLFRPPRTN 621
+ FG RK K D+ + G F + + TW VK+A+ +F P N
Sbjct: 475 VAFGCRRKTKSGEAK-DLSVKEEQSISGPFSFQTDSTTWVADVKQANAVPVVIFEKPLLN 533
Query: 622 SRKTRAAPSYINMEKLNSKSFLTLGNFGLISVGVI 656
+ + N ++ + L G FG + G +
Sbjct: 534 ITFSDLLSATSNFDR---DTLLADGKFGPVYRGFL 565
>UNIPROTKB|Q9GZU5 [details] [associations]
symbol:NYX "Nyctalopin" species:9606 "Homo sapiens"
[GO:0050896 "response to stimulus" evidence=IEA] [GO:0007601
"visual perception" evidence=IEA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005622 "intracellular" evidence=IDA]
GO:GO:0007601 GO:GO:0005578 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0050896 GO:GO:0005622
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 EMBL:CH471141
Orphanet:215 EMBL:Z93015 EMBL:AJ278865 EMBL:AF254868 EMBL:BC112242
IPI:IPI00072576 RefSeq:NP_072089.1 UniGene:Hs.302019
ProteinModelPortal:Q9GZU5 SMR:Q9GZU5 STRING:Q9GZU5
PhosphoSite:Q9GZU5 DMDM:23396778 PRIDE:Q9GZU5 DNASU:60506
Ensembl:ENST00000342595 Ensembl:ENST00000378220 GeneID:60506
KEGG:hsa:60506 UCSC:uc004dfh.2 CTD:60506 GeneCards:GC0XP041306
HGNC:HGNC:8082 MIM:300278 MIM:310500 neXtProt:NX_Q9GZU5
PharmGKB:PA31871 eggNOG:NOG328516 HOGENOM:HOG000230477
HOVERGEN:HBG031762 InParanoid:Q9GZU5 KO:K08129 OMA:NISFITP
OrthoDB:EOG43JC4W PhylomeDB:Q9GZU5 GenomeRNAi:60506 NextBio:65415
Bgee:Q9GZU5 CleanEx:HS_NYX Genevestigator:Q9GZU5
GermOnline:ENSG00000188937 Uniprot:Q9GZU5
Length = 481
Score = 192 (72.6 bits), Expect = 7.8e-13, Sum P(2) = 7.8e-13
Identities = 72/263 (27%), Positives = 114/263 (43%)
Query: 69 LDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHI 128
+DL N LR + F L SL L L NL++I+P AF L L L L+ N ++
Sbjct: 67 IDLDRNGLRFLGERAFGTLPSLRRLSLRHNNLSFITPGAFKGLPRLAELRLAHNGDLRYL 126
Query: 129 DWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLV 188
L +L LDL + ++P+ + A LR L +N + V L + L
Sbjct: 127 H-ARTFAALSRLRRLDLAACRLFSVPERLLAELPALRELAAFDN--LFRRVPGAL-RGLA 182
Query: 189 HLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNC 248
+L L ++ ++ + +LR+L L N + A A L L L +
Sbjct: 183 NLTHAHLERGRIEA-VASSSLQGLRRLRSLSLQANRVRAVHAG-AFGDCGVLEHLLLNDN 240
Query: 249 GLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLK 308
L+ LPA+ F L+ L++ N L A + L LE L + +++ + F
Sbjct: 241 LLAELPADAFRGLRRLRTLNLGGNALDRVARAWFADLAELELLYLDRNSIAFVEEGAFQN 300
Query: 309 MTSLKTLILSGNKLETLESGLFQ 331
++ L L L+GN+L L FQ
Sbjct: 301 LSGLLALHLNGNRLTVLAWVAFQ 323
Score = 169 (64.5 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 83/280 (29%), Positives = 118/280 (42%)
Query: 95 LNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSG-ISNL 153
L+R L ++ AF L L+ L L N L S I G L +L L L +G + L
Sbjct: 69 LDRNGLRFLGERAFGTLPSLRRLSLRHNNL-SFITPGAFKG-LPRLAELRLAHNGDLRYL 126
Query: 154 PDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLD-LSNCHLKGPLSEDAFVNA 212
FA + LR L+LA L V L L L L N + P + N
Sbjct: 127 HARTFAALSRLRRLDLAACRLFS--VPERLLAELPALRELAAFDNLFRRVPGALRGLANL 184
Query: 213 TKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHN 272
T +L + A S +L+ L +L LSL+ + + A F L+ L ++ N
Sbjct: 185 THA---HLERGRIEAV-ASSSLQGLRRLRSLSLQANRVRAVHAGAFGDCGVLEHLLLNDN 240
Query: 273 PLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQN 332
L + L L L++G + L R++R+ F + L+ L L N + +E G FQN
Sbjct: 241 LLAELPADAFRGLRRLRTLNLGGNALDRVARAWFADLAELELLYLDRNSIAFVEEGAFQN 300
Query: 333 LTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNP 372
L+ L L LN LT L F + L L L NP
Sbjct: 301 LSGLLALHLNGNRLTVLAWVAFQPGFF---LGRLFLFRNP 337
Score = 129 (50.5 bits), Expect = 2.1e-06, Sum P(3) = 2.1e-06
Identities = 71/257 (27%), Positives = 105/257 (40%)
Query: 20 ITINLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGN-PLR 77
++I+L+ N ++ + E AF SL L ++ LS I P F L L +L L+ N LR
Sbjct: 65 VSIDLDRNGLRFLGERAFGTLPSLRRLSLRHNNLSFITPGAFKGLPRLAELRLAHNGDLR 124
Query: 78 IIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNL 137
+ F L+ L L L C L + L L+ L N + + L L
Sbjct: 125 YLHARTFAALSRLRRLDLAACRLFSVPERLLAELPALRELAAFDNLFR-RVPGAL--RGL 181
Query: 138 GKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSN 197
L L + I + + LR+L+L N + + A G V L+ L L N
Sbjct: 182 ANLTHAHLERGRIEAVASSSLQGLRRLRSLSLQANRVRAVH-AGAFGDCGV-LEHL-LLN 238
Query: 198 CHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANT 257
+L L DAF +LRTL L GN L L +L L L ++ +
Sbjct: 239 DNLLAELPADAFRGLRRLRTLNLGGNALDRV-ARAWFADLAELELLYLDRNSIAFVEEGA 297
Query: 258 FHRFTCLQELDISHNPL 274
F + L L ++ N L
Sbjct: 298 FQNLSGLLALHLNGNRL 314
Score = 128 (50.1 bits), Expect = 8.6e-06, Sum P(2) = 8.6e-06
Identities = 35/107 (32%), Positives = 56/107 (52%)
Query: 19 LITINLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLR 77
L +++L AN ++ V GAF L +L + + L+++ F L L L+L GN L
Sbjct: 208 LRSLSLQANRVRAVHAGAFGDCGVLEHLLLNDNLLAELPADAFRGLRRLRTLNLGGNALD 267
Query: 78 IIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKL 124
+ F L LE L L+R ++ ++ AF NL+ L L L+ N+L
Sbjct: 268 RVARAWFADLAELELLYLDRNSIAFVEEGAFQNLSGLLALHLNGNRL 314
Score = 55 (24.4 bits), Expect = 7.8e-13, Sum P(2) = 7.8e-13
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 525 LVGNPWKCDCNIADMWEW 542
L NPW CDC + + +W
Sbjct: 333 LFRNPWCCDCRLEWLRDW 350
Score = 45 (20.9 bits), Expect = 2.1e-06, Sum P(3) = 2.1e-06
Identities = 9/34 (26%), Positives = 19/34 (55%)
Query: 455 IDYLPPNVFNNTRNITSLNLANNNLSMTSELSFQ 488
I ++ F N + +L+L N L++ + ++FQ
Sbjct: 290 IAFVEEGAFQNLSGLLALHLNGNRLTVLAWVAFQ 323
>FB|FBgn0023095 [details] [associations]
symbol:caps "capricious" species:7227 "Drosophila
melanogaster" [GO:0007411 "axon guidance" evidence=IMP] [GO:0007424
"open tracheal system development" evidence=IMP] [GO:0016020
"membrane" evidence=NAS] [GO:0007155 "cell adhesion" evidence=NAS]
[GO:0016477 "cell migration" evidence=TAS] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0007156
"homophilic cell adhesion" evidence=IDA] [GO:0035147 "branch
fusion, open tracheal system" evidence=IMP] [GO:0008045 "motor
neuron axon guidance" evidence=IMP] [GO:0042995 "cell projection"
evidence=IDA] [GO:0007476 "imaginal disc-derived wing
morphogenesis" evidence=IMP] [GO:0046331 "lateral inhibition"
evidence=IMP] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
EMBL:AE014296 GO:GO:0016477 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007155 GO:GO:0008045
GO:GO:0042995 GO:GO:0046331 InterPro:IPR000372 SMART:SM00013
GO:GO:0007476 GO:GO:0035147 ChiTaRS:CAPS CTD:828
FlyBase:FBgn0023095 RefSeq:NP_001036604.2 UniGene:Dm.2067
ProteinModelPortal:Q0E8F0 SMR:Q0E8F0 STRING:Q0E8F0 PRIDE:Q0E8F0
GeneID:39493 KEGG:dme:Dmel_CG11282 UCSC:CG11282-RC GenomeRNAi:39493
NextBio:813926 Bgee:Q0E8F0 Uniprot:Q0E8F0
Length = 748
Score = 211 (79.3 bits), Expect = 8.8e-13, Sum P(2) = 8.8e-13
Identities = 98/318 (30%), Positives = 139/318 (43%)
Query: 58 QFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTL 117
QF+ LT L DLS N + I F L+ L L+ + +S F L+ + L
Sbjct: 92 QFYAQLTFL---DLSFNDMLTIPERSFAYHAKLQELHLDHNKIGQVSNKTFLGLSTISVL 148
Query: 118 ELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDL 177
L N L + +++ + KL L+L Q+ IS++ + LR L L +N L +
Sbjct: 149 NLRGN-LIAELEYR-TFSPMVKLAELNLGQNRISHIDPHALDGLDNLRVLYLDDNTLTTV 206
Query: 178 DVATTLGQNLVHLDSLDL-SNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKP 236
T Q L L L L +N + P AF + L L L G L ALK
Sbjct: 207 PGELTF-QALHSLAELYLGTNSFMTIP--GGAFQDLKGLTRLDLRGAGLHNIS-GDALKG 262
Query: 237 LTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDM-GY 295
L L L L + L +P F R L++L+I N + S L L HL++ G
Sbjct: 263 LVSLRFLDLSDNRLPAIPTAAFQRLGRLEQLNIGQNDFEVISSGAFSGLRELRHLELTGA 322
Query: 296 SNLQRISRSTFLKMTSLKTLILSGNK-LETLESGLFQNLTHLSVLELNNCGLTRLNETVF 354
L+R+ F T+L+ L LS NK L L S L HLS + L L+ L+E +
Sbjct: 323 QRLRRVESGAFSGNTNLEHLNLSSNKQLNELSSIALGGLPHLSTVVLKANQLSSLDEGLV 382
Query: 355 HENYTYPDLEELRLSGNP 372
+ DL+ L LS NP
Sbjct: 383 ----PWADLQTLDLSENP 396
Score = 202 (76.2 bits), Expect = 8.5e-12, Sum P(2) = 8.5e-12
Identities = 81/309 (26%), Positives = 135/309 (43%)
Query: 19 LITINLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLR 77
L ++L+ N + + E +F L L++ + +++ + F L+T++ L+L GN +
Sbjct: 97 LTFLDLSFNDMLTIPERSFAYHAKLQELHLDHNKIGQVSNKTFLGLSTISVLNLRGNLIA 156
Query: 78 IIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNL 137
+E F P+ L L L + +++I P A D L++L+ L L N L + + L L
Sbjct: 157 ELEYRTFSPMVKLAELNLGQNRISHIDPHALDGLDNLRVLYLDDNTLTT-VPGELTFQAL 215
Query: 138 GKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSN 197
L L L + +P F + L L+L L ++ G LV L LDLS+
Sbjct: 216 HSLAELYLGTNSFMTIPGGAFQDLKGLTRLDLRGAGLHNISGDALKG--LVSLRFLDLSD 273
Query: 198 CHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCG-LSRLPAN 256
L + AF +L L + N S A L +L L L L R+ +
Sbjct: 274 NRLPA-IPTAAFQRLGRLEQLNIGQNDFEVIS-SGAFSGLRELRHLELTGAQRLRRVESG 331
Query: 257 TFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISR--STFLKMTSLKT 314
F T L+ L++S N ++ +++ L L HL ++S + L+T
Sbjct: 332 AFSGNTNLEHLNLSSNKQLNELSSIA--LGGLPHLSTVVLKANQLSSLDEGLVPWADLQT 389
Query: 315 LILSGNKLE 323
L LS N E
Sbjct: 390 LDLSENPFE 398
Score = 172 (65.6 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 80/330 (24%), Positives = 138/330 (41%)
Query: 16 NPGLITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNP 75
NP + + + N ++ ++ + L +L + + I + F L +L L N
Sbjct: 71 NPAIQRLVIKNNKLKTIDSSMQFYAQLTFLDLSFNDMLTIPERSFAYHAKLQELHLDHNK 130
Query: 76 LRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLG 135
+ + F L+++ L L + + F + L L L QN++ SHID L
Sbjct: 131 IGQVSNKTFLGLSTISVLNLRGNLIAELEYRTFSPMVKLAELNLGQNRI-SHID-PHALD 188
Query: 136 NLGKLDTLDLRQSGISNLPDNV-FANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLD 194
L L L L + ++ +P + F L L L N + + Q+L L LD
Sbjct: 189 GLDNLRVLYLDDNTLTTVPGELTFQALHSLAELYLGTNSFMTIPGGAF--QDLKGLTRLD 246
Query: 195 LSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLP 254
L L +S DA LR L LS N L A + A + L +L +L++ +
Sbjct: 247 LRGAGLHN-ISGDALKGLVSLRFLDLSDNRLPAIP-TAAFQRLGRLEQLNIGQNDFEVIS 304
Query: 255 ANTFHRFTCLQELDISH-NPLIDAFTALLSPLESLEHLDMGYSN-LQRISRSTFLKMTSL 312
+ F L+ L+++ L + S +LEHL++ + L +S + L
Sbjct: 305 SGAFSGLRELRHLELTGAQRLRRVESGAFSGNTNLEHLNLSSNKQLNELSSIALGGLPHL 364
Query: 313 KTLILSGNKLETLESGLFQNLTHLSVLELN 342
T++L N+L +L+ GL L L+L+
Sbjct: 365 STVVLKANQLSSLDEGLVP-WADLQTLDLS 393
Score = 169 (64.5 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 75/265 (28%), Positives = 115/265 (43%)
Query: 14 LDNPGLITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSG 73
LDN ++ ++ N P E F SL LY+ + I F +L L +LDL G
Sbjct: 190 LDNLRVLYLDDNTLTTVPGELTFQALHSLAELYLGTNSFMTIPGGAFQDLKGLTRLDLRG 249
Query: 74 NPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLV 133
L I L SL +L L+ L I +AF L L+ L + QN + + +
Sbjct: 250 AGLHNISGDALKGLVSLRFLDLSDNRLPAIPTAAFQRLGRLEQLNIGQNDFE--VISSGA 307
Query: 134 LGNLGKLDTLDLRQSG-ISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDS 192
L +L L+L + + + F+ NT L +LNL+ N+ ++ + LG L HL +
Sbjct: 308 FSGLRELRHLELTGAQRLRRVESGAFSGNTNLEHLNLSSNKQLNELSSIALG-GLPHLST 366
Query: 193 LDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSR 252
+ L L ++ V L+TL LS NP D + L H L RN
Sbjct: 367 VVLKANQLSS--LDEGLVPWADLQTLDLSENPFEC-DCRL----LWLRHLLVSRNASGQY 419
Query: 253 LPANTFHRFTCLQELDISH--NPLI 275
P + T L++L ++H PL+
Sbjct: 420 APVICAYP-TALRDLPLAHLAEPLL 443
Score = 41 (19.5 bits), Expect = 8.8e-13, Sum P(2) = 8.8e-13
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 463 FNNTRNITSLNLANNN 478
FNN N+++L+ NNN
Sbjct: 708 FNNNNNVSTLS--NNN 721
>TAIR|locus:2136313 [details] [associations]
symbol:AT4G39270 species:3702 "Arabidopsis thaliana"
[GO:0004672 "protein kinase activity" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005886 "plasma
membrane" evidence=ISM] [GO:0006468 "protein phosphorylation"
evidence=IEA;ISS] [GO:0007169 "transmembrane receptor protein
tyrosine kinase signaling pathway" evidence=ISS] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0002237 "response to molecule of bacterial
origin" evidence=RCA] [GO:0007165 "signal transduction"
evidence=RCA] [GO:0010103 "stomatal complex morphogenesis"
evidence=RCA] [GO:0048443 "stamen development" evidence=RCA]
[GO:0048767 "root hair elongation" evidence=RCA] InterPro:IPR000719
InterPro:IPR001245 InterPro:IPR011009 Pfam:PF07714 PROSITE:PS50011
GO:GO:0005524 EMBL:CP002687 SUPFAM:SSF56112 Gene3D:2.60.120.200
InterPro:IPR013320 GO:GO:0004672 EMBL:AL161594 EMBL:AL050351
IPI:IPI00521676 PIR:T08575 RefSeq:NP_195638.1 UniGene:At.31106
ProteinModelPortal:Q9T033 SMR:Q9T033 STRING:Q9T033
EnsemblPlants:AT4G39270.1 GeneID:830083 KEGG:ath:AT4G39270
TAIR:At4g39270 InParanoid:Q9T033 OMA:RSLDWIT PhylomeDB:Q9T033
ProtClustDB:CLSN2685674 Genevestigator:Q9T033 Uniprot:Q9T033
Length = 864
Score = 205 (77.2 bits), Expect = 9.4e-13, P = 9.4e-13
Identities = 85/276 (30%), Positives = 128/276 (46%)
Query: 56 NPQFFT-NLTTLNKLDLSGNPLRIIEPG----VF-DPLTSLEYLMLNRCNLTYISPSAFD 109
NP+F +L L +L S N R PG +F L +LE L L+ C++T P +
Sbjct: 89 NPEFSVGSLVNLTRL-ASFNASRFYLPGPIPALFGSSLLTLEVLDLSSCSITGTIPESLT 147
Query: 110 NLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGI-SNLPDNVFANNTWLRNLN 168
L+HLK L+LS+N + I L L +L L LDL + + ++P N+ A + L+ LN
Sbjct: 148 RLSHLKVLDLSKNAINGDIP--LSLTSLQNLSILDLSSNSVFGSIPANIGALSK-LQRLN 204
Query: 169 LAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAA 228
L+ N L + +LG V +D LDLS + G + D L+TL ++GN LS +
Sbjct: 205 LSRNTLTS-SIPPSLGDLSVLID-LDLSFNGMSGSVPSD-LKGLRNLQTLVIAGNRLSGS 261
Query: 229 DLSVALKPLTKLHRLSLRNCG-LSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLES 287
L+KL + R G + LP+ + L+ LDIS N D +S
Sbjct: 262 LPPDLFSLLSKLQIIDFRGSGFIGALPSRLWS-LPELKFLDISGNHFSDMLPNTTVSFDS 320
Query: 288 LEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLE 323
+ + S T L +T + + LS N E
Sbjct: 321 TVSM-LNISGNMFYGNLTLL-LTRFQVVDLSENYFE 354
Score = 125 (49.1 bits), Expect = 0.00043, P = 0.00043
Identities = 67/246 (27%), Positives = 111/246 (45%)
Query: 28 PIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPL 87
PI + G+ L+ +L L C+++ P+ T L+ L LDLS N + P L
Sbjct: 116 PIPALFGSSLLTLEVLDL--SSCSITGTIPESLTRLSHLKVLDLSKNAINGDIPLSLTSL 173
Query: 88 TSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQ 147
+L L L+ ++ P+ L+ L+ L LS+N L S I +L G+L L LDL
Sbjct: 174 QNLSILDLSSNSVFGSIPANIGALSKLQRLNLSRNTLTSSIPPSL--GDLSVLIDLDLSF 231
Query: 148 SGIS-NLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSE 206
+G+S ++P ++ L+ L +A N L + L L L +D G L
Sbjct: 232 NGMSGSVPSDLKGLRN-LQTLVIAGNRLSG-SLPPDLFSLLSKLQIIDFRGSGFIGALPS 289
Query: 207 DAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQE 266
+ + +L+ L +SGN S D+ + ++ +S+ N + N T Q
Sbjct: 290 RLW-SLPELKFLDISGNHFS--DM-LPNTTVSFDSTVSMLNISGNMFYGNLTLLLTRFQV 345
Query: 267 LDISHN 272
+D+S N
Sbjct: 346 VDLSEN 351
>FB|FBgn0000709 [details] [associations]
symbol:fliI "flightless I" species:7227 "Drosophila
melanogaster" [GO:0007629 "flight behavior" evidence=IMP]
[GO:0010004 "gastrulation involving germ band extension"
evidence=IMP] [GO:0003779 "actin binding" evidence=ISS;NAS]
[GO:0005509 "calcium ion binding" evidence=ISS;NAS] [GO:0030239
"myofibril assembly" evidence=IMP] [GO:0007527 "adult somatic
muscle development" evidence=IMP] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR007122 PRINTS:PR00597 PROSITE:PS51450 SMART:SM00262
GO:GO:0003779 GO:GO:0007527 EMBL:AE014298 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 GO:GO:0030239 GO:GO:0007629
InterPro:IPR007123 PANTHER:PTHR11977 Pfam:PF00626
InterPro:IPR025875 Pfam:PF12799 GO:GO:0010004 EMBL:AF017777
GeneTree:ENSGT00660000095502 OMA:MEEWNED EMBL:U01182 EMBL:AF132184
PIR:S60461 RefSeq:NP_525097.1 UniGene:Dm.1666
ProteinModelPortal:Q24020 SMR:Q24020 IntAct:Q24020 STRING:Q24020
PaxDb:Q24020 PRIDE:Q24020 EnsemblMetazoa:FBtr0077192 GeneID:33110
KEGG:dme:Dmel_CG1484 CTD:2314 FlyBase:FBgn0000709
HOGENOM:HOG000263916 InParanoid:Q24020 OrthoDB:EOG4DR7T5
GenomeRNAi:33110 NextBio:781957 Bgee:Q24020 GermOnline:CG1484
Uniprot:Q24020
Length = 1256
Score = 207 (77.9 bits), Expect = 9.5e-13, P = 9.5e-13
Identities = 97/338 (28%), Positives = 156/338 (46%)
Query: 44 YLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLML--NRCNLT 101
+L + L++I P+ +L L L L+ N L I G L+ L L L N+ +
Sbjct: 33 WLTLDRTQLAEI-PEELGHLQKLEHLSLNHNRLEKIF-GELTELSCLRSLDLRHNQLKNS 90
Query: 102 YISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANN 161
I P F +L L TL+LS NKLK + L L L+L + I ++P +F +
Sbjct: 91 GIPPELF-HLEELTTLDLSHNKLKEVPEG---LERAKNLIVLNLSNNQIESIPTPLFIHL 146
Query: 162 TWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLS 221
T L L+L+ N L L T + L++L +LDLS+ L+ + L L +S
Sbjct: 147 TDLLFLDLSHNRLETLPPQT---RRLINLKTLDLSHNPLE-LFQLRQLPSLQSLEVLKMS 202
Query: 222 GNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTAL 281
G + + ++ L L L L + L +LP ++ T L L++S N L + TA
Sbjct: 203 GTQRTLLNFPTSIDSLANLCELDLSHNSLPKLPDCVYNVVT-LVRLNLSDNELTE-LTAG 260
Query: 282 LSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLEL 341
+ + LE L++ + L + + K+ L+ L+++ NKL G+ + L LE+
Sbjct: 261 VELWQRLESLNLSRNQLVALP-AALCKLPKLRRLLVNDNKLNF--EGIPSGIGKLGALEV 317
Query: 342 NNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDS 379
+ L E V L++L LS N L LPD+
Sbjct: 318 FSAA-NNLLEMVPEGLCRCGALKQLNLSCNRLITLPDA 354
Score = 206 (77.6 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 81/275 (29%), Positives = 130/275 (47%)
Query: 19 LITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRI 78
L T++L+ N ++ V A++L+ L + + I F +LT L LDLS N L
Sbjct: 102 LTTLDLSHNKLKEVPEGLERAKNLIVLNLSNNQIESIPTPLFIHLTDLLFLDLSHNRLET 161
Query: 79 IEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLG 138
+ P L +L+ L L+ L +L L+ L++S + ++ +++ + +L
Sbjct: 162 LPPQT-RRLINLKTLDLSHNPLELFQLRQLPSLQSLEVLKMSGTQ-RTLLNFPTSIDSLA 219
Query: 139 KLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNC 198
L LDL + + LPD V+ N L LNL++NEL +L L Q L +SL+LS
Sbjct: 220 NLCELDLSHNSLPKLPDCVY-NVVTLVRLNLSDNELTELTAGVELWQRL---ESLNLSRN 275
Query: 199 HLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTF 258
L + A KLR L ++ N L+ + + L L S N L +P
Sbjct: 276 QLVALPA--ALCKLPKLRRLLVNDNKLNFEGIPSGIGKLGALEVFSAANNLLEMVPEGLC 333
Query: 259 HRFTCLQELDISHNPLIDAFTALLSPLESLEHLDM 293
R L++L++S N LI A+ LE L+ LD+
Sbjct: 334 -RCGALKQLNLSCNRLITLPDAI-HLLEGLDQLDL 366
Score = 163 (62.4 bits), Expect = 5.4e-08, P = 5.4e-08
Identities = 104/365 (28%), Positives = 158/365 (43%)
Query: 40 RSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRI--IEPGVFDPLTSLEYLMLNR 97
+ L +L + L KI + T L+ L LDL N L+ I P +F L L L L+
Sbjct: 52 QKLEHLSLNHNRLEKIFGEL-TELSCLRSLDLRHNQLKNSGIPPELFH-LEELTTLDLSH 109
Query: 98 CNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNV 157
L + P + +L L LS N+++S I L + +L L LDL + + LP
Sbjct: 110 NKLKEV-PEGLERAKNLIVLNLSNNQIES-IPTPLFI-HLTDLLFLDLSHNRLETLPPQT 166
Query: 158 FANNTWLRNLNLAEN--ELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKL 215
L+ L+L+ N EL L +L Q+L L L P S D+ N +L
Sbjct: 167 -RRLINLKTLDLSHNPLELFQLRQLPSL-QSLEVLKMSGTQRTLLNFPTSIDSLANLCEL 224
Query: 216 RTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLI 275
LS N L L + + L RL+L + L+ L A + L+ L++S N L+
Sbjct: 225 D---LSHNSLPK--LPDCVYNVVTLVRLNLSDNELTELTAGV-ELWQRLESLNLSRNQLV 278
Query: 276 DAFTALLSPLESLEHLDMGYS--NLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNL 333
A A L L L L + + N + I S K+ +L+ + N LE + GL +
Sbjct: 279 -ALPAALCKLPKLRRLLVNDNKLNFEGIP-SGIGKLGALEVFSAANNLLEMVPEGLCR-C 335
Query: 334 THLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQIW 393
L L L+ L L + + + L++L L NP V+P + S T + +
Sbjct: 336 GALKQLNLSCNRLITLPDAI----HLLEGLDQLDLRNNPELVMPPKPSEASKAT-SLEFY 390
Query: 394 KNFDF 398
N DF
Sbjct: 391 -NIDF 394
Score = 142 (55.0 bits), Expect = 9.9e-06, P = 9.9e-06
Identities = 49/161 (30%), Positives = 83/161 (51%)
Query: 216 RTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLI 275
R +L+ + A++ L L KL LSL + L ++ +CL+ LD+ HN L
Sbjct: 30 RVQWLTLDRTQLAEIPEELGHLQKLEHLSLNHNRLEKI-FGELTELSCLRSLDLRHNQLK 88
Query: 276 DA-FTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLT 334
++ L LE L LD+ ++ L+ + + +L L LS N++E++ + LF +LT
Sbjct: 89 NSGIPPELFHLEELTTLDLSHNKLKEVPEG-LERAKNLIVLNLSNNQIESIPTPLFIHLT 147
Query: 335 HLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHV 375
L L+L++ RL ET+ + +L+ L LS NPL +
Sbjct: 148 DLLFLDLSH---NRL-ETLPPQTRRLINLKTLDLSHNPLEL 184
Score = 142 (55.0 bits), Expect = 9.9e-06, P = 9.9e-06
Identities = 62/211 (29%), Positives = 99/211 (46%)
Query: 178 DVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPL 237
++ LG +L L+ L L++ L+ E + LR+L L N L + + L L
Sbjct: 43 EIPEELG-HLQKLEHLSLNHNRLEKIFGE--LTELSCLRSLDLRHNQLKNSGIPPELFHL 99
Query: 238 TKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSN 297
+L L L + L +P R L L++S+N + T L L L LD+ ++
Sbjct: 100 EELTTLDLSHNKLKEVPEG-LERAKNLIVLNLSNNQIESIPTPLFIHLTDLLFLDLSHNR 158
Query: 298 LQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHEN 357
L+ + T ++ +LKTL LS N LE + +L L VL+++ T LN ++
Sbjct: 159 LETLPPQT-RRLINLKTLDLSHNPLELFQLRQLPSLQSLEVLKMSGTQRTLLNFPTSIDS 217
Query: 358 YTYPDLEELRLSGNPLHVLPDSTKQYSMRTI 388
+L EL LS N L LPD Y++ T+
Sbjct: 218 LA--NLCELDLSHNSLPKLPDCV--YNVVTL 244
Score = 125 (49.1 bits), Expect = 0.00067, P = 0.00067
Identities = 69/259 (26%), Positives = 115/259 (44%)
Query: 227 AADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLE 286
+A +++ ++++ L+L L+ +P H L+ L ++HN L F L + L
Sbjct: 18 SATFPSSMRQMSRVQWLTLDRTQLAEIPEELGH-LQKLEHLSLNHNRLEKIFGEL-TELS 75
Query: 287 SLEHLDMGYSNLQR--ISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNC 344
L LD+ ++ L+ I F + L TL LS NKL+ + GL + +L VL L+N
Sbjct: 76 CLRSLDLRHNQLKNSGIPPELF-HLEELTTLDLSHNKLKEVPEGL-ERAKNLIVLNLSNN 133
Query: 345 GLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQY-SMRTIPTQIWKNFDFLVILF 403
+ + +F DL L LS N L LP T++ +++T+ + N + LF
Sbjct: 134 QIESIPTPLFIH---LTDLLFLDLSHNRLETLPPQTRRLINLKTL--DLSHN---PLELF 185
Query: 404 ILNETVFHENYTYPDLEELRLSGNPLHVL--PTGNXXXXXXXXXXXXXXXXCKIDYLPPN 461
L + + LE L++SG +L PT K LP
Sbjct: 186 QLRQLP-----SLQSLEVLKMSGTQRTLLNFPTSIDSLANLCELDLSHNSLPK---LPDC 237
Query: 462 VFNNTRNITSLNLANNNLS 480
V+N + LNL++N L+
Sbjct: 238 VYNVV-TLVRLNLSDNELT 255
>UNIPROTKB|Q13045 [details] [associations]
symbol:FLII "Protein flightless-1 homolog" species:9606
"Homo sapiens" [GO:0003779 "actin binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005925 "focal adhesion" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006936 "muscle
contraction" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005813 "centrosome" evidence=IDA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007122 PRINTS:PR00597
PROSITE:PS51450 SMART:SM00262 GO:GO:0007275 GO:GO:0005634
GO:GO:0005737 GO:GO:0005813 GO:GO:0003779 GO:GO:0006355
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0006351
GO:GO:0005925 GO:GO:0006936 InterPro:IPR007123 PANTHER:PTHR11977
Pfam:PF00626 InterPro:IPR025875 Pfam:PF12799 HOGENOM:HOG000016110
OMA:MEEWNED CTD:2314 EMBL:U80184 EMBL:AK295655 EMBL:AC127537
EMBL:BC025300 EMBL:U01184 IPI:IPI00031023 IPI:IPI01013074
PIR:A49674 RefSeq:NP_001243193.1 RefSeq:NP_001243194.1
RefSeq:NP_002009.1 UniGene:Hs.513984 ProteinModelPortal:Q13045
SMR:Q13045 IntAct:Q13045 MINT:MINT-1399971 STRING:Q13045
PhosphoSite:Q13045 DMDM:18202493 PaxDb:Q13045 PeptideAtlas:Q13045
PRIDE:Q13045 DNASU:2314 Ensembl:ENST00000327031
Ensembl:ENST00000545457 GeneID:2314 KEGG:hsa:2314 UCSC:uc002gsq.1
GeneCards:GC17M018148 HGNC:HGNC:3750 HPA:CAB016132 HPA:HPA007084
HPA:HPA008903 MIM:182290 MIM:600362 neXtProt:NX_Q13045 Orphanet:819
PharmGKB:PA28171 HOVERGEN:HBG051627 InParanoid:Q13045
OrthoDB:EOG4TB49G PhylomeDB:Q13045 ChiTaRS:FLII GenomeRNAi:2314
NextBio:9397 ArrayExpress:Q13045 Bgee:Q13045 CleanEx:HS_FLII
Genevestigator:Q13045 GermOnline:ENSG00000177731 Uniprot:Q13045
Length = 1269
Score = 207 (77.9 bits), Expect = 9.6e-13, P = 9.6e-13
Identities = 95/343 (27%), Positives = 158/343 (46%)
Query: 41 SLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNL 100
SL +L + L + P+ L L L +S N L + G L SL ++ +L
Sbjct: 34 SLRWLKLNRTGLCYL-PEELAALQKLEHLSVSHNNLTTLH-GELSSLPSLRAIVARANSL 91
Query: 101 TYIS-PSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFA 159
P L+ L L+LS N+L + L N + L+L + I +P+ +F
Sbjct: 92 KNSGVPDDIFKLDDLSVLDLSHNQLT---ECPRELENAKNMLVLNLSHNSIDTIPNQLFI 148
Query: 160 NNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLS-NCHLKGPLSEDAFVNATKLRTL 218
N T L L+L+EN L L + LVHL +L L+ N L L + T L+TL
Sbjct: 149 NLTDLLYLDLSENRLESLPPQM---RRLVHLQTLVLNGNPLLHAQLRQ--LPAMTALQTL 203
Query: 219 YLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAF 278
+L + ++L +L+ L+ L + L L+R+P + L+ L++S N + +
Sbjct: 204 HLRSTQRTQSNLPTSLEGLSNLADVDLSCNDLTRVP-ECLYTLPSLRRLNLSSNQITE-L 261
Query: 279 TALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLET--LESGLFQNLTHL 336
+ + +E L++ + L + S K++ LK L L+ NKL+ L SG+ + LT+L
Sbjct: 262 SLCIDQWVHVETLNLSRNQLTSLP-SAICKLSKLKKLYLNSNKLDFDGLPSGIGK-LTNL 319
Query: 337 SVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDS 379
N L + E++ P L +L L+ N L LP++
Sbjct: 320 EEFMAANNNLELVPESLCR----CPKLRKLVLNKNHLVTLPEA 358
Score = 199 (75.1 bits), Expect = 7.1e-12, P = 7.1e-12
Identities = 80/286 (27%), Positives = 137/286 (47%)
Query: 7 VYNDRRNLDNPGLITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTL 66
V +D LD+ L ++L+ N + A+++L L + ++ I Q F NLT L
Sbjct: 96 VPDDIFKLDD--LSVLDLSHNQLTECPRELENAKNMLVLNLSHNSIDTIPNQLFINLTDL 153
Query: 67 NKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLEL-SQNKLK 125
LDLS N L + P + L L+ L+LN L + + L+TL L S + +
Sbjct: 154 LYLDLSENRLESLPPQM-RRLVHLQTLVLNGNPLLHAQLRQLPAMTALQTLHLRSTQRTQ 212
Query: 126 SHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQ 185
S++ +L L L +DL + ++ +P+ ++ + LR LNL+ N++ +L +
Sbjct: 213 SNLPTSLE--GLSNLADVDLSCNDLTRVPECLYTLPS-LRRLNLSSNQITELSLCI---D 266
Query: 186 NLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSL 245
VH+++L+LS L S A +KL+ LYL+ N L L + LT L
Sbjct: 267 QWVHVETLNLSRNQLTSLPS--AICKLSKLKKLYLNSNKLDFDGLPSGIGKLTNLEEFMA 324
Query: 246 RNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTAL--LSPLESLE 289
N L +P + R L++L ++ N L+ A+ L+ +E L+
Sbjct: 325 ANNNLELVP-ESLCRCPKLRKLVLNKNHLVTLPEAIHFLTEIEVLD 369
Score = 176 (67.0 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 84/310 (27%), Positives = 137/310 (44%)
Query: 69 LDLSGNPLRI-IEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKS- 126
+DLSGN + P +TSL +L LNR L Y+ P L L+ L +S N L +
Sbjct: 13 VDLSGNDFKGGYFPENVKAMTSLRWLKLNRTGLCYL-PEELAALQKLEHLSVSHNNLTTL 71
Query: 127 HIDWTLVLGNLGKLDTLDLRQSGISN--LPDNVFANNTWLRNLNLAENELIDLDVATTLG 184
H + L +L L + R + + N +PD++F + L L+L+ N+L +
Sbjct: 72 HGE----LSSLPSLRAIVARANSLKNSGVPDDIFKLDD-LSVLDLSHNQLTECPRELENA 126
Query: 185 QNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLS 244
+N++ L+LS+ + + F+N T L L LS N L + L ++ L L L
Sbjct: 127 KNML---VLNLSHNSID-TIPNQLFINLTDLLYLDLSENRLES--LPPQMRRLVHLQTLV 180
Query: 245 LRNCGLSRLPANTFHRFTCLQELDISHNPLIDA-FTALLSPLESLEHLDMGYSNLQRISR 303
L L T LQ L + + L L +L +D+ ++L R+
Sbjct: 181 LNGNPLLHAQLRQLPAMTALQTLHLRSTQRTQSNLPTSLEGLSNLADVDLSCNDLTRVPE 240
Query: 304 STFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDL 363
+ + SL+ L LS N++ L + Q H+ L L+ LT L + + L
Sbjct: 241 CLYT-LPSLRRLNLSSNQITELSLCIDQ-WVHVETLNLSRNQLTSLPSAICKLS----KL 294
Query: 364 EELRLSGNPL 373
++L L+ N L
Sbjct: 295 KKLYLNSNKL 304
Score = 164 (62.8 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 81/322 (25%), Positives = 146/322 (45%)
Query: 22 INLNANPIQPVEGAFLVARSLLYLYMQECTLSKIN-PQFFTNLTTLNKLDLSGNPLRIIE 80
++++ N + + G SL + + +L P L L+ LDLS N L
Sbjct: 61 LSVSHNNLTTLHGELSSLPSLRAIVARANSLKNSGVPDDIFKLDDLSVLDLSHNQLTEC- 119
Query: 81 PGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKL 140
P + ++ L L+ ++ I F NL L L+LS+N+L+S + L L
Sbjct: 120 PRELENAKNMLVLNLSHNSIDTIPNQLFINLTDLLYLDLSENRLES---LPPQMRRLVHL 176
Query: 141 DTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHL 200
TL L + + + T L+ L+L + ++ T+L + L +L +DLS C+
Sbjct: 177 QTLVLNGNPLLHAQLRQLPAMTALQTLHLRSTQRTQSNLPTSL-EGLSNLADVDLS-CND 234
Query: 201 KGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHR 260
+ E + LR L LS N ++ +LS+ + + L+L L+ LP+ +
Sbjct: 235 LTRVPECLYT-LPSLRRLNLSSNQIT--ELSLCIDQWVHVETLNLSRNQLTSLPS-AICK 290
Query: 261 FTCLQELDISHNPL-IDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSG 319
+ L++L ++ N L D + + L +LE +NL+ + S + L+ L+L+
Sbjct: 291 LSKLKKLYLNSNKLDFDGLPSGIGKLTNLEEFMAANNNLELVPES-LCRCPKLRKLVLNK 349
Query: 320 NKLETLESGLFQNLTHLSVLEL 341
N L TL + LT + VL++
Sbjct: 350 NHLVTLPEAI-HFLTEIEVLDV 370
>UNIPROTKB|F1NXL1 [details] [associations]
symbol:RTN4RL2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004872 "receptor activity" evidence=IEA]
[GO:0009986 "cell surface" evidence=IEA] [GO:0046658 "anchored to
plasma membrane" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
GO:GO:0009986 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0004872 InterPro:IPR000372 SMART:SM00013
GO:GO:0046658 GeneTree:ENSGT00690000101803 OMA:WFREARV
EMBL:AADN02050753 IPI:IPI00574718 ProteinModelPortal:F1NXL1
Ensembl:ENSGALT00000038761 Uniprot:F1NXL1
Length = 306
Score = 161 (61.7 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 66/210 (31%), Positives = 91/210 (43%)
Query: 17 PGLITINLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNP 75
PG + L N I+ + G F + L+LY +S I P F +L L +LDL NP
Sbjct: 55 PGARRLFLQNNVIRALRAGTFGPSTVTLWLYSNN--ISSIQPGTFRHLPALEELDLGDNP 112
Query: 76 -LRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVL 134
LR++ P F L L+ L L RC L + + F L+ L+ L L +N L ++ L
Sbjct: 113 HLRVLAPDTFHGLRRLQALHLYRCQLASLPSAIFRGLHSLQYLYLQENGLL-YLQDDL-F 170
Query: 135 GNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLD 194
+L L L L + + L + VF L L L N L + G L L L
Sbjct: 171 ADLANLSHLFLHGNRLRALSEGVFRGLPSLDRLLLHANRLATVHRRAFRG--LARLTILY 228
Query: 195 LSNCHLKGPLSEDAFVNATKLRTLYLSGNP 224
L N L L D L+ L L+ NP
Sbjct: 229 LFNNSLAA-LPGDPLAALPALQFLRLNANP 257
Score = 154 (59.3 bits), Expect = 7.1e-12, Sum P(2) = 7.1e-12
Identities = 64/211 (30%), Positives = 94/211 (44%)
Query: 165 RNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNP 224
R L L +N +I A T G + V +L L + ++ + F + L L L NP
Sbjct: 58 RRLFL-QNNVIRALRAGTFGPSTV---TLWLYSNNISS-IQPGTFRHLPALEELDLGDNP 112
Query: 225 ---LSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTAL 281
+ A D L+ L LH L C L+ LP+ F LQ L + N L+ L
Sbjct: 113 HLRVLAPDTFHGLRRLQALH---LYRCQLASLPSAIFRGLHSLQYLYLQENGLLYLQDDL 169
Query: 282 LSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLEL 341
+ L +L HL + + L+ +S F + SL L+L N+L T+ F+ L L++L L
Sbjct: 170 FADLANLSHLFLHGNRLRALSEGVFRGLPSLDRLLLHANRLATVHRRAFRGLARLTILYL 229
Query: 342 NNCGLTRLNETVFHENYTYPDLEELRLSGNP 372
N L L P L+ LRL+ NP
Sbjct: 230 FNNSLAALPGDPLA---ALPALQFLRLNANP 257
Score = 126 (49.4 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 60/218 (27%), Positives = 90/218 (41%)
Query: 216 RTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLI 275
R L+L N + A P T L L + +S + TF L+ELD+ NP +
Sbjct: 58 RRLFLQNNVIRALRAGT-FGPSTVT--LWLYSNNISSIQPGTFRHLPALEELDLGDNPHL 114
Query: 276 DAFTA-LLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLT 334
L L+ L + L + + F + SL+ L L N L L+ LF +L
Sbjct: 115 RVLAPDTFHGLRRLQALHLYRCQLASLPSAIFRGLHSLQYLYLQENGLLYLQDDLFADLA 174
Query: 335 HLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWK 394
+LS L L+ L L+E VF P L+ L L N L T+ + ++
Sbjct: 175 NLSHLFLHGNRLRALSEGVFRG---LPSLDRLLLHANRL------------ATVHRRAFR 219
Query: 395 NFDFLVILFILNETVF----HENYTYPDLEELRLSGNP 428
L IL++ N ++ P L+ LRL+ NP
Sbjct: 220 GLARLTILYLFNNSLAALPGDPLAALPALQFLRLNANP 257
Score = 78 (32.5 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 519 AITSIKLVGNPWKCDCNIADMWEWATREK 547
A+ ++L NPW CDC +W W R +
Sbjct: 247 ALQFLRLNANPWACDCRARPLWAWFRRTR 275
>UNIPROTKB|F1PVE1 [details] [associations]
symbol:PHLPP1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005543 "phospholipid binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR001849 InterPro:IPR001932
Pfam:PF00481 PROSITE:PS50003 PROSITE:PS51450 SMART:SM00233
SMART:SM00332 GO:GO:0003824 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0008152 Gene3D:3.60.40.10 SUPFAM:SSF81606
GeneTree:ENSGT00440000037833 OMA:CCELSAG EMBL:AAEX03000087
EMBL:AAEX03000088 Ensembl:ENSCAFT00000000123 Uniprot:F1PVE1
Length = 1388
Score = 207 (77.9 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 110/428 (25%), Positives = 186/428 (43%)
Query: 19 LITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRI 78
L T L+ N +Q + L YL + + I P+ LT ++KL +SGN +
Sbjct: 431 LQTFLLDGNFLQALPPELENMHQLSYLGLSFNEFTDI-PEILEKLTAVDKLCMSGNCMET 489
Query: 79 IEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLG 138
+ + ++++ L + + D L H+ L+L NKL +D ++ N+
Sbjct: 490 LRLEALRKMPHIKHVDLRLNVIRKLIADEVDFLQHVTQLDLRDNKL-GDLD-AMIFNNI- 546
Query: 139 KLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLS-N 197
+ L ++ + L N+ +L+ L A NEL+ LDV N +L +D+S N
Sbjct: 547 --EVLHCERNQLVTL--NICGY--FLKALYAASNELVQLDVYPV--PN--YLSYMDVSRN 596
Query: 198 CHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANT 257
C P + + KL L + N + +L L + L +L + L+RLP
Sbjct: 597 CLENVP---EWVCESRKLEVLDIGHNQI--CELPARLFCHSSLRKLLAGHNQLTRLPER- 650
Query: 258 FHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTS--LKTL 315
R T ++ LD+ HN L++ LL +SL L+ + L+ + +T + T+ L+ L
Sbjct: 651 LER-TSVEVLDVQHNQLLELPPNLLMKADSLRFLNASANKLETLPPATLSEETNSILQEL 709
Query: 316 ILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHV 375
L+ N L L HL +L + RL + +LEE+ +SGN L
Sbjct: 710 YLTNNNLTDKCVPLLTGHPHLKILHM---AYNRLQSFPASKMAKLEELEEIDISGNKLKA 766
Query: 376 LPDSTKQYSMRTIPTQIWKN--FD-FLVILFI------------LNETVFHENYTYPDLE 420
+P T + R + T I + + F ++ + L+E EN P L+
Sbjct: 767 IP--TTIMNCRRMHTMIAHSNCIEVFPEVMQLPEIKCVDLSCNELSEVTLPENLP-PKLQ 823
Query: 421 ELRLSGNP 428
EL L+GNP
Sbjct: 824 ELDLTGNP 831
Score = 169 (64.5 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 90/338 (26%), Positives = 150/338 (44%)
Query: 63 LTTLNKLDLSGNPLRIIEPGVFDPLTSL-----EYLMLNRCNL----TYISPSAFDNL-- 111
L + +LDL N L ++ +F+ + L + + LN C Y + + L
Sbjct: 522 LQHVTQLDLRDNKLGDLDAMIFNNIEVLHCERNQLVTLNICGYFLKALYAASNELVQLDV 581
Query: 112 ----NHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNL 167
N+L +++S+N L++ +W KL+ LD+ + I LP +F +++ LR L
Sbjct: 582 YPVPNYLSYMDVSRNCLENVPEWVC---ESRKLEVLDIGHNQICELPARLFCHSS-LRKL 637
Query: 168 NLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSA 227
N+L L L + V + LD+ + L L + + A LR L S N L
Sbjct: 638 LAGHNQLTRLP--ERLERTSVEV--LDVQHNQLL-ELPPNLLMKADSLRFLNASANKLET 692
Query: 228 ---ADLSVALKPLTKLHRLSLRNCGLSR--LPANTFHRFTCLQELDISHNPLIDAFTALL 282
A LS + L L L N L+ +P T H L+ L +++N L + +
Sbjct: 693 LPPATLSEETNSI--LQELYLTNNNLTDKCVPLLTGHPH--LKILHMAYNRLQSFPASKM 748
Query: 283 SPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELN 342
+ LE LE +D+ + L+ I +T + + T+I N +E + L + ++L+
Sbjct: 749 AKLEELEEIDISGNKLKAIP-TTIMNCRRMHTMIAHSNCIEVFPEVM--QLPEIKCVDLS 805
Query: 343 NCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDST 380
C L+E EN P L+EL L+GNP L T
Sbjct: 806 -CN--ELSEVTLPENLP-PKLQELDLTGNPRLALDHKT 839
Score = 141 (54.7 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 102/397 (25%), Positives = 161/397 (40%)
Query: 57 PQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKT 116
P N+ TL +L++S N LR + P + +L+ +L+ N P +N++ L
Sbjct: 399 PLAVCNIPTLTELNVSCNALRAV-PAAVGVMHNLQTFLLDG-NFLQALPPELENMHQLSY 456
Query: 117 LELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELID 176
L LS N+ D +L L +D L + + + L +++++L N +
Sbjct: 457 LGLSFNEFT---DIPEILEKLTAVDKLCMSGNCMETLRLEALRKMPHIKHVDLRLNVIRK 513
Query: 177 LDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNA-------TKLRTLYLSGNPLSAAD 229
L +A + L H+ LDL + L G L F N +L TL + G L A
Sbjct: 514 L-IADEV-DFLQHVTQLDLRDNKL-GDLDAMIFNNIEVLHCERNQLVTLNICGYFLKA-- 568
Query: 230 LSVALKPLTKLHRLSLRN----CGLSRLPANTFHRFTC----LQELDISHNPLIDAFTAL 281
L A L +L + N +SR + C L+ LDI HN + + A
Sbjct: 569 LYAASNELVQLDVYPVPNYLSYMDVSRNCLENVPEWVCESRKLEVLDIGHNQICE-LPAR 627
Query: 282 LSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLEL 341
L SL L G++ L R+ L+ TS++ L + N+L L L L L
Sbjct: 628 LFCHSSLRKLLAGHNQLTRLPER--LERTSVEVLDVQHNQLLELPPNLLMKADSLRFLNA 685
Query: 342 NNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVI 401
+ L L E T L+EL L+ N L + + +P + L I
Sbjct: 686 SANKLETLPPATLSEE-TNSILQELYLTNNNL----------TDKCVP--LLTGHPHLKI 732
Query: 402 LFI----LNETVFHENYTYPDLEELRLSGNPLHVLPT 434
L + L + +LEE+ +SGN L +PT
Sbjct: 733 LHMAYNRLQSFPASKMAKLEELEEIDISGNKLKAIPT 769
Score = 130 (50.8 bits), Expect = 0.00022, P = 0.00022
Identities = 62/223 (27%), Positives = 98/223 (43%)
Query: 139 KLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELID---LDVATTLG--QNLVHLDSL 193
++ ++DL + +LP N+F + L +LNL +N L L A L Q L SL
Sbjct: 330 RISSVDLSCCSLEHLPANLFYSQD-LTHLNLKQNFLRQNPCLPTARGLNELQRFTKLKSL 388
Query: 194 DLSNCHL-KGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSR 252
+LSN HL + PL A N L L +S N L A +V + + L L L
Sbjct: 389 NLSNNHLGEFPL---AVCNIPTLTELNVSCNALRAVPAAVGV--MHNLQTFLLDGNFLQA 443
Query: 253 LPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSL 312
LP L L +S N D +L L +++ L M + ++ + KM +
Sbjct: 444 LPPE-LENMHQLSYLGLSFNEFTD-IPEILEKLTAVDKLCMSGNCMETLRLEALRKMPHI 501
Query: 313 KTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFH 355
K + L N + L + L H++ L+L + L L+ +F+
Sbjct: 502 KHVDLRLNVIRKLIADEVDFLQHVTQLDLRDNKLGDLDAMIFN 544
>ZFIN|ZDB-GENE-080327-25 [details] [associations]
symbol:lrrc4ba "leucine rich repeat containing 4Ba"
species:7955 "Danio rerio" [GO:0051965 "positive regulation of
synapse assembly" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR007110 InterPro:IPR026883 PROSITE:PS50835
PROSITE:PS51450 ZFIN:ZDB-GENE-080327-25 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00690000101682 KO:K16360
PANTHER:PTHR24369:SF7 EMBL:CR936968 IPI:IPI00774078
RefSeq:XP_684717.3 UniGene:Dr.114368 Ensembl:ENSDART00000076649
Ensembl:ENSDART00000150958 GeneID:556747 KEGG:dre:556747 CTD:556747
NextBio:20881642 Uniprot:F1QBH8
Length = 729
Score = 203 (76.5 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 71/239 (29%), Positives = 115/239 (48%)
Query: 38 VARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNR 97
++ + YL +QE T+ I F +L L L LS N +R IE G F+ L +L L L
Sbjct: 67 ISNNTRYLNLQENTIQVIKSDTFKHLRHLEILQLSKNQIRQIEVGAFNGLPNLNTLELFD 126
Query: 98 CNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLV-LGNLGKLDTLDLRQSGISNLPDN 156
LT + AF+ L+ L+ L L N +++ + + +L +LD +L++ + + D
Sbjct: 127 NRLTLVPSQAFEYLSKLRELWLRNNPIETLPGYAFHRVPSLRRLDLGELKK--LDYISDA 184
Query: 157 VFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLR 216
F LR LNL L D+ T L V L+ L+LS L+ + +F LR
Sbjct: 185 AFVGLINLRYLNLGMCGLKDIPNLTPL----VRLEELELSGNRLE-IIRPGSFQGLESLR 239
Query: 217 TLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLI 275
L+L + +S + + A L L L+L + L LP + F L+ + ++HNP +
Sbjct: 240 KLWLMHSQMSVIERN-AFDDLKNLEELNLSHNSLHSLPHDLFTPLQKLERVHLNHNPWV 297
Score = 154 (59.3 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 64/232 (27%), Positives = 111/232 (47%)
Query: 143 LDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKG 202
L+L+++ I + + F + L L L++N++ ++V G L +L++L+L + L
Sbjct: 74 LNLQENTIQVIKSDTFKHLRHLEILQLSKNQIRQIEVGAFNG--LPNLNTLELFDNRLTL 131
Query: 203 PLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCG-LSRLPANTFHRF 261
S+ AF +KLR L+L NP+ A + L RL L L + F
Sbjct: 132 VPSQ-AFEYLSKLRELWLRNNPIETLP-GYAFHRVPSLRRLDLGELKKLDYISDAAFVGL 189
Query: 262 TCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNK 321
L+ L++ L D L+PL LE L++ + L+ I +F + SL+ L L ++
Sbjct: 190 INLRYLNLGMCGLKDIPN--LTPLVRLEELELSGNRLEIIRPGSFQGLESLRKLWLMHSQ 247
Query: 322 LETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYT-YPDLEELRLSGNP 372
+ +E F +L +L L L++ L L H+ +T LE + L+ NP
Sbjct: 248 MSVIERNAFDDLKNLEELNLSHNSLHSLP----HDLFTPLQKLERVHLNHNP 295
Score = 150 (57.9 bits), Expect = 6.8e-07, P = 6.8e-07
Identities = 40/94 (42%), Positives = 52/94 (55%)
Query: 33 EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEY 92
+ AF+ +L YL + C L I P T L L +L+LSGN L II PG F L SL
Sbjct: 183 DAAFVGLINLRYLNLGMCGLKDI-PNL-TPLVRLEELELSGNRLEIIRPGSFQGLESLRK 240
Query: 93 LMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKS 126
L L ++ I +AFD+L +L+ L LS N L S
Sbjct: 241 LWLMHSQMSVIERNAFDDLKNLEELNLSHNSLHS 274
Score = 142 (55.0 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 57/212 (26%), Positives = 95/212 (44%)
Query: 290 HLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRL 349
+L++ + +Q I TF + L+ L LS N++ +E G F L +L+ LEL + LT +
Sbjct: 73 YLNLQENTIQVIKSDTFKHLRHLEILQLSKNQIRQIEVGAFNGLPNLNTLELFDNRLTLV 132
Query: 350 NETVFHENYTYPDLEELRLSGNPLHVLPDST--KQYSMRTIPTQIWKNFDFL---VILFI 404
F Y L EL L NP+ LP + S+R + K D++ + +
Sbjct: 133 PSQAFE--YL-SKLRELWLRNNPIETLPGYAFHRVPSLRRLDLGELKKLDYISDAAFVGL 189
Query: 405 LNETVFH---------ENYT-YPDLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCK 454
+N + N T LEEL LSGN L ++ G+
Sbjct: 190 INLRYLNLGMCGLKDIPNLTPLVRLEELELSGNRLEIIRPGSFQGLESLRKLWLMHSQMS 249
Query: 455 IDYLPPNVFNNTRNITSLNLANNNL-SMTSEL 485
+ + N F++ +N+ LNL++N+L S+ +L
Sbjct: 250 V--IERNAFDDLKNLEELNLSHNSLHSLPHDL 279
Score = 140 (54.3 bits), Expect = 8.2e-06, P = 8.2e-06
Identities = 71/238 (29%), Positives = 104/238 (43%)
Query: 109 DNL-NHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNL 167
DN+ N+ + L L +N ++ + + +L L+ L L ++ I + F L L
Sbjct: 65 DNISNNTRYLNLQENTIQ--VIKSDTFKHLRHLEILQLSKNQIRQIEVGAFNGLPNLNTL 122
Query: 168 NLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSA 227
L +N L L V + + L L L L N ++ L AF LR L L L
Sbjct: 123 ELFDNRLT-L-VPSQAFEYLSKLRELWLRNNPIE-TLPGYAFHRVPSLRRLDLG--ELKK 177
Query: 228 ADL--SVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPL 285
D A L L L+L CGL +P T L+EL++S N L L
Sbjct: 178 LDYISDAAFVGLINLRYLNLGMCGLKDIPNLT--PLVRLEELELSGNRLEIIRPGSFQGL 235
Query: 286 ESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNN 343
ESL L + +S + I R+ F + +L+ L LS N L +L LF L L + LN+
Sbjct: 236 ESLRKLWLMHSQMSVIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLQKLERVHLNH 293
>UNIPROTKB|F1RW91 [details] [associations]
symbol:RXFP1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060658 "nipple morphogenesis" evidence=IEA]
[GO:0060427 "lung connective tissue development" evidence=IEA]
[GO:0042562 "hormone binding" evidence=IEA] [GO:0030198
"extracellular matrix organization" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0007567 "parturition"
evidence=IEA] [GO:0007188 "adenylate cyclase-modulating G-protein
coupled receptor signaling pathway" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0004930 "G-protein coupled
receptor activity" evidence=IEA] InterPro:IPR001611
InterPro:IPR000276 InterPro:IPR002172 InterPro:IPR008112
InterPro:IPR017452 Pfam:PF00001 Pfam:PF00057 PRINTS:PR00237
PRINTS:PR01739 PROSITE:PS50068 PROSITE:PS50262 PROSITE:PS51450
SMART:SM00192 GO:GO:0016021 GO:GO:0030154 GO:GO:0004930
InterPro:IPR003591 SMART:SM00369 GO:GO:0030198 GO:GO:0042562
GO:GO:0007188 Gene3D:4.10.400.10 InterPro:IPR023415 SUPFAM:SSF57424
PROSITE:PS01209 GO:GO:0007567 InterPro:IPR000372 SMART:SM00013
GO:GO:0060427 OMA:YTLTTRP GO:GO:0060658
GeneTree:ENSGT00650000093266 EMBL:CU896689 EMBL:AEMK01185779
EMBL:CU467602 Ensembl:ENSSSCT00000009716 Uniprot:F1RW91
Length = 770
Score = 203 (76.5 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 75/252 (29%), Positives = 117/252 (46%)
Query: 16 NPGLITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNP 75
N L+++ N P +G F L L +Q + ++ F L +L KL LS N
Sbjct: 139 NVTLMSLQWNLIRKLPPDG-FKKYHDLQKLCLQNNKIRSVSVYAFRGLYSLTKLYLSHNR 197
Query: 76 LRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLG 135
+ ++PGVF+ L LE+L++ +L ISP F LN L L L N L +H+ +
Sbjct: 198 ITFLKPGVFEDLHRLEWLIIEDNHLNRISPLTFYGLNSLILLVLMNNVL-THLPDKPLCQ 256
Query: 136 NLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDL 195
++ +L LD + I NL + F + + L L + +N++ L+ T L LD LDL
Sbjct: 257 HMPRLHWLDFEGNHIHNLRNLTFISCSNLTVLVMRKNKINHLNENTFAP--LQKLDELDL 314
Query: 196 SNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPA 255
+ ++ LS F + +L L LS NP+ + L KL LSL +S +
Sbjct: 315 GSNKIEN-LSPHVFKDLKELSQLNLSYNPIQKIQAN-QFDYLVKLKSLSLEGLEISNIQQ 372
Query: 256 NTFHRFTCLQEL 267
F T L +
Sbjct: 373 RMFRPLTNLSHI 384
Score = 167 (63.8 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 73/285 (25%), Positives = 128/285 (44%)
Query: 68 KLDLSGNPLRIIEPGVFDPLT--SLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLK 125
+LD LR + P V +T SL++ ++ + + P F + L+ L L NK++
Sbjct: 122 ELDCDETNLRAV-PSVSSNVTLMSLQWNLIRK-----LPPDGFKKYHDLQKLCLQNNKIR 175
Query: 126 SHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQ 185
S + G L L L L + I+ L VF + L L + +N L + T G
Sbjct: 176 S-VSVYAFRG-LYSLTKLYLSHNRITFLKPGVFEDLHRLEWLIIEDNHLNRISPLTFYGL 233
Query: 186 N-LVHLDSLDLSNCHLKG-PLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRL 243
N L+ L ++ HL PL + + +L L GN + ++ + L L
Sbjct: 234 NSLILLVLMNNVLTHLPDKPLCQ----HMPRLHWLDFEGNHIHNLR-NLTFISCSNLTVL 288
Query: 244 SLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISR 303
+R ++ L NTF L ELD+ N + + + L+ L L++ Y+ +Q+I
Sbjct: 289 VMRKNKINHLNENTFAPLQKLDELDLGSNKIENLSPHVFKDLKELSQLNLSYNPIQKIQA 348
Query: 304 STFLKMTSLKTLILSGNKLETLESGLFQ---NLTHLSVLELNNCG 345
+ F + LK+L L G ++ ++ +F+ NL+H+ + CG
Sbjct: 349 NQFDYLVKLKSLSLEGLEISNIQQRMFRPLTNLSHIYFKKFQYCG 393
Score = 132 (51.5 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 51/198 (25%), Positives = 88/198 (44%)
Query: 190 LDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCG 249
L L L N ++ +S AF L LYLS N ++ V + L +L L + +
Sbjct: 164 LQKLCLQNNKIRS-VSVYAFRGLYSLTKLYLSHNRITFLKPGV-FEDLHRLEWLIIEDNH 221
Query: 250 LSRLPANTFHRFTCLQELDISHNPLIDA-FTALLSPLESLEHLDMGYSNLQRISRSTFLK 308
L+R+ TF+ L L + +N L L + L LD +++ + TF+
Sbjct: 222 LNRISPLTFYGLNSLILLVLMNNVLTHLPDKPLCQHMPRLHWLDFEGNHIHNLRNLTFIS 281
Query: 309 MTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRL 368
++L L++ NK+ L F L L L+L + + L+ VF + +L +L L
Sbjct: 282 CSNLTVLVMRKNKINHLNENTFAPLQKLDELDLGSNKIENLSPHVFKD---LKELSQLNL 338
Query: 369 SGNPLHVLPDSTKQYSMR 386
S NP+ + + Y ++
Sbjct: 339 SYNPIQKIQANQFDYLVK 356
Score = 128 (50.1 bits), Expect = 0.00018, P = 0.00018
Identities = 54/238 (22%), Positives = 98/238 (41%)
Query: 140 LDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCH 199
L L L+ + I ++ F L L L+ N + L ++L L+ L + + H
Sbjct: 164 LQKLCLQNNKIRSVSVYAFRGLYSLTKLYLSHNRITFLKPGVF--EDLHRLEWLIIEDNH 221
Query: 200 LKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFH 259
L +S F L L L N L+ + + +LH L + L TF
Sbjct: 222 LNR-ISPLTFYGLNSLILLVLMNNVLTHLPDKPLCQHMPRLHWLDFEGNHIHNLRNLTFI 280
Query: 260 RFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSG 319
+ L L + N + +PL+ L+ LD+G + ++ +S F + L L LS
Sbjct: 281 SCSNLTVLVMRKNKINHLNENTFAPLQKLDELDLGSNKIENLSPHVFKDLKELSQLNLSY 340
Query: 320 NKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHE--NYTYPDLEELRLSGNPLHV 375
N ++ +++ F L L L L ++ + + +F N ++ ++ + G HV
Sbjct: 341 NPIQKIQANQFDYLVKLKSLSLEGLEISNIQQRMFRPLTNLSHIYFKKFQYCGYAPHV 398
>UNIPROTKB|F1SUL2 [details] [associations]
symbol:LRRC32 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050710 "negative regulation of cytokine secretion"
evidence=IEA] [GO:0046007 "negative regulation of activated T cell
proliferation" evidence=IEA] [GO:0010628 "positive regulation of
gene expression" evidence=IEA] InterPro:IPR001611 PROSITE:PS51450
InterPro:IPR003591 SMART:SM00369 GO:GO:0010628 InterPro:IPR000372
SMART:SM00013 GO:GO:0046007 GO:GO:0050710
GeneTree:ENSGT00700000104185 CTD:2615 OMA:CCGNGWL EMBL:CU915508
RefSeq:XP_003129719.1 UniGene:Ssc.93908 Ensembl:ENSSSCT00000016222
GeneID:100522452 KEGG:ssc:100522452 Uniprot:F1SUL2
Length = 663
Score = 202 (76.2 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 110/368 (29%), Positives = 158/368 (42%)
Query: 17 PGLITINLNANPIQP--VEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGN 74
P L ++L+ N + E A +L L + E +L+++ F L LDL N
Sbjct: 125 PHLTALDLSGNSLYSGLAEQLLGEAPALRTLSLAENSLTRLARHTFRGAPALEWLDLHSN 184
Query: 75 PLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVL 134
L IE G F+ L L +L L+R +LT IS F L L+ L+LS N +++
Sbjct: 185 VLMDIEDGAFEALPRLAHLNLSRNSLTCISD--F-RLQQLRVLDLSCNSIEAFQTAPEPP 241
Query: 135 GNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLD 194
+L LDLR++ + + PD V A L LN++ N LI L G +H S
Sbjct: 242 AEY-QLAWLDLRENRLLHFPD-VTALPR-LVYLNVSNN-LIRLPEGPPQGGEGIHAPSEG 297
Query: 195 LSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSL-RNCGLSRL 253
+ P + ++L L LS N + L+ LT L L+L RNC L
Sbjct: 298 WAALPASNPGRNASTPPLSQLLNLDLSYNEIELVPEGF-LEHLTSLRFLNLSRNC-LQAF 355
Query: 254 PANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLK 313
A CL LDISHN L + L SL L + + L + F + SL+
Sbjct: 356 RAWGAGSLPCLMRLDISHNAL-EKLELGAGALGSLRTLLLQDNALWDLPPYAFASLASLQ 414
Query: 314 TLILSGNKL-------ETLESGL--FQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLE 364
L L GN++ E SG F ++ L L L + ET+ + + L
Sbjct: 415 RLNLQGNRISPCGGPGEPGPSGCVAFSGISSLRFLNL----VDNKVETLRAGAFLHTPLT 470
Query: 365 ELRLSGNP 372
EL LS NP
Sbjct: 471 ELDLSANP 478
Score = 186 (70.5 bits), Expect = 7.2e-11, P = 7.2e-11
Identities = 86/277 (31%), Positives = 132/277 (47%)
Query: 63 LTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQN 122
L+ L LDLS N + ++ G + LTSL +L L+R L +L L L++S N
Sbjct: 315 LSQLLNLDLSYNEIELVPEGFLEHLTSLRFLNLSRNCLQAFRAWGAGSLPCLMRLDISHN 374
Query: 123 KLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATT 182
L+ ++ L G LG L TL L+ + + +LP FA+ L+ LNL N +
Sbjct: 375 ALEK-LE--LGAGALGSLRTLLLQDNALWDLPPYAFASLASLQRLNLQGNRISPCGGPGE 431
Query: 183 LGQN----LVHLDSLDLSNC--HLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSV-ALK 235
G + + SL N + L AF++ T L L LS NP D++ AL
Sbjct: 432 PGPSGCVAFSGISSLRFLNLVDNKVETLRAGAFLH-TPLTELDLSANP--GLDVATGALA 488
Query: 236 PLT-KLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPL--IDAFTALLSPLESLEHLD 292
L L L+L+ GL+ L + F+CL+ L+++ N L + A+T +S LE LD
Sbjct: 489 GLEGSLEVLALQGNGLATLQVD-LPCFSCLKRLNLAENRLSRLPAWTQAVS----LEVLD 543
Query: 293 MGYSNLQRISRSTFLKM-TSLKTLILSGNKLETLESG 328
+ ++ + S + TSL+ L L GN L +G
Sbjct: 544 LRNNSFSLLPGSAMGGLETSLRRLYLQGNPLSCCGNG 580
Score = 158 (60.7 bits), Expect = 8.0e-08, P = 8.0e-08
Identities = 71/221 (32%), Positives = 105/221 (47%)
Query: 17 PGLITINLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNP 75
P L+ ++++ N ++ +E GA + SL L +Q+ L + P F +L +L +L+L GN
Sbjct: 364 PCLMRLDISHNALEKLELGAGALG-SLRTLLLQDNALWDLPPYAFASLASLQRLNLQGNR 422
Query: 76 LRII----EPG-----VFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKS 126
+ EPG F ++SL +L L + + AF + L L+LS N
Sbjct: 423 ISPCGGPGEPGPSGCVAFSGISSLRFLNLVDNKVETLRAGAFLH-TPLTELDLSANPGLD 481
Query: 127 HIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQN 186
L G G L+ L L+ +G++ L ++ + L+ LNLAEN L L T
Sbjct: 482 VATGALA-GLEGSLEVLALQGNGLATLQVDLPCFSC-LKRLNLAENRLSRLPAWT----Q 535
Query: 187 LVHLDSLDLSNCHLKGPLSEDAFVNA-TKLRTLYLSGNPLS 226
V L+ LDL N L A T LR LYL GNPLS
Sbjct: 536 AVSLEVLDLRNNSFS-LLPGSAMGGLETSLRRLYLQGNPLS 575
Score = 157 (60.3 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 70/246 (28%), Positives = 108/246 (43%)
Query: 140 LDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCH 199
++ LDL + + ++P + LR L+L+ NE+ L Q L HL+ L+L++
Sbjct: 52 IEALDLSGNQLRSIPASPLGFYVALRRLDLSANEISSLQPGAF--QALPHLEHLNLAHNR 109
Query: 200 L-KG-PLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANT 257
L +G L L L LSGN L + L L LSL L+RL +T
Sbjct: 110 LAQGMALGAGGLGPLPHLTALDLSGNSLYSGLAEQLLGEAPALRTLSLAENSLTRLARHT 169
Query: 258 FHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLIL 317
F L+ LD+ N L+D L L HL++ ++L IS ++ L+ L L
Sbjct: 170 FRGAPALEWLDLHSNVLMDIEDGAFEALPRLAHLNLSRNSLTCISD---FRLQQLRVLDL 226
Query: 318 SGNKLETLESGLFQNLTH-LSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVL 376
S N +E ++ + L+ L+L RL F + P L L +S N + L
Sbjct: 227 SCNSIEAFQTAPEPPAEYQLAWLDLRE---NRLLH--FPDVTALPRLVYLNVSNNLIR-L 280
Query: 377 PDSTKQ 382
P+ Q
Sbjct: 281 PEGPPQ 286
Score = 144 (55.7 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 56/165 (33%), Positives = 77/165 (46%)
Query: 66 LNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLK 125
+ LDLSGN LR I +L L L+ ++ + P AF L HL+ L L+ N+L
Sbjct: 52 IEALDLSGNQLRSIPASPLGFYVALRRLDLSANEISSLQPGAFQALPHLEHLNLAHNRLA 111
Query: 126 SHIDWTLVLGNLGKLD---TLDLRQSGI-SNLPDNVFANNTWLRNLNLAENELIDLDVAT 181
+ L G LG L LDL + + S L + + LR L+LAEN L L T
Sbjct: 112 QGM--ALGAGGLGPLPHLTALDLSGNSLYSGLAEQLLGEAPALRTLSLAENSLTRLARHT 169
Query: 182 TLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLS 226
G L+ LDL + L + + AF +L L LS N L+
Sbjct: 170 FRGAPA--LEWLDLHSNVLMD-IEDGAFEALPRLAHLNLSRNSLT 211
Score = 126 (49.4 bits), Expect = 0.00024, P = 0.00024
Identities = 82/276 (29%), Positives = 123/276 (44%)
Query: 111 LNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLA 170
L+ L L+LS N+++ + L +L L L+L ++ + + L L+++
Sbjct: 315 LSQLLNLDLSYNEIELVPEG--FLEHLTSLRFLNLSRNCLQAFRAWGAGSLPCLMRLDIS 372
Query: 171 ENELIDLDV-ATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAA- 228
N L L++ A LG L +L L + L L AF + L+ L L GN +S
Sbjct: 373 HNALEKLELGAGALGS----LRTLLLQDNAL-WDLPPYAFASLASLQRLNLQGNRISPCG 427
Query: 229 -------DLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTAL 281
VA ++ L L+L + + L A F T L ELD+S NP +D T
Sbjct: 428 GPGEPGPSGCVAFSGISSLRFLNLVDNKVETLRAGAFLH-TPLTELDLSANPGLDVATGA 486
Query: 282 LSPLE-SLEHLDM---GYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLS 337
L+ LE SLE L + G + LQ + F + LK L L+ N+L L + + L
Sbjct: 487 LAGLEGSLEVLALQGNGLATLQ-VDLPCF---SCLKRLNLAENRLSRLPA--WTQAVSLE 540
Query: 338 VLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPL 373
VL+L N + L + T L L L GNPL
Sbjct: 541 VLDLRNNSFSLLPGSAMGGLET--SLRRLYLQGNPL 574
Score = 45 (20.9 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 458 LPPNVFNNTRNITSLNLANNNLS 480
LPP F + ++ LNL N +S
Sbjct: 402 LPPYAFASLASLQRLNLQGNRIS 424
>ZFIN|ZDB-GENE-080327-14 [details] [associations]
symbol:lrrtm4l2 "leucine rich repeat transmembrane
neuronal 4 like 2" species:7955 "Danio rerio" [GO:0005515 "protein
binding" evidence=IPI] [GO:0042802 "identical protein binding"
evidence=IDA] InterPro:IPR001611 PROSITE:PS51450
ZFIN:ZDB-GENE-080327-14 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0042802
InterPro:IPR000372 SMART:SM00013 HOVERGEN:HBG052362 EMBL:CU468765
IPI:IPI00876678 UniGene:Dr.110767 IntAct:A8BB35 STRING:A8BB35
Uniprot:A8BB35
Length = 445
Score = 169 (64.5 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 64/230 (27%), Positives = 100/230 (43%)
Query: 149 GISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLD-LSNCHLK-GPLSE 206
G ++P+N+ + + L+L N L+ L L HL+ L L H +
Sbjct: 47 GFQDVPENI---SLGCQGLSLRYNSLLLL-----LPYQFAHLNQLVWLYLDHNSISTVDR 98
Query: 207 DAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQE 266
AF +L+ L LS N ++ + + + L L L + L FH LQ
Sbjct: 99 LAFQGLRRLKELILSSNKIAQLQ-NGTFETVPNLRNLDLSYNQMQDLVPGHFHGLRKLQN 157
Query: 267 LDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLE 326
L + N + SLE LD+GY+ L+ I+R+TFL + L L L N+ +
Sbjct: 158 LHLRSNNIRSIPVRTFMECRSLEFLDLGYNRLRTITRTTFLGLLRLTELHLEHNQFSRIN 217
Query: 327 SGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVL 376
LF L +L L L R+ V +T+ L++L LSGN + +L
Sbjct: 218 FFLFPRLLNLQALYLQ---WNRIRTVVQGSPWTWHTLQKLDLSGNEIQIL 264
Score = 163 (62.4 bits), Expect = 6.5e-12, Sum P(2) = 6.5e-12
Identities = 67/253 (26%), Positives = 113/253 (44%)
Query: 69 LDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHI 128
L L N L ++ P F L L +L L+ +++ + AF L LK L LS NK+
Sbjct: 62 LSLRYNSLLLLLPYQFAHLNQLVWLYLDHNSISTVDRLAFQGLRRLKELILSSNKIAQLQ 121
Query: 129 DWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLV 188
+ T + L LDL + + +L F L+NL+L N + + V T +
Sbjct: 122 NGTFE--TVPNLRNLDLSYNQMQDLVPGHFHGLRKLQNLHLRSNNIRSIPVRTFM--ECR 177
Query: 189 HLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKP-LTKLHRLSLRN 247
L+ LDL L+ ++ F+ +L L+L N S ++ L P L L L L+
Sbjct: 178 SLEFLDLGYNRLR-TITRTTFLGLLRLTELHLEHNQFSR--INFFLFPRLLNLQALYLQW 234
Query: 248 CGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFL 307
+ + + + LQ+LD+S N + A+ L +L L++ + + +S
Sbjct: 235 NRIRTVVQGSPWTWHTLQKLDLSGNEIQILDPAIFRCLPNLHTLNLESNKISNVSLEVVS 294
Query: 308 KMTSLKTLILSGN 320
S+ T+ L+GN
Sbjct: 295 SWISISTINLAGN 307
Score = 149 (57.5 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 59/252 (23%), Positives = 114/252 (45%)
Query: 36 FLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLML 95
F L++LY+ ++S ++ F L L +L LS N + ++ G F+ + +L L L
Sbjct: 77 FAHLNQLVWLYLDHNSISTVDRLAFQGLRRLKELILSSNKIAQLQNGTFETVPNLRNLDL 136
Query: 96 NRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPD 155
+ + + P F L L+ L L N ++S T + L+ LDL + + +
Sbjct: 137 SYNQMQDLVPGHFHGLRKLQNLHLRSNNIRSIPVRTFM--ECRSLEFLDLGYNRLRTITR 194
Query: 156 NVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKL 215
F L L+L N+ ++ L L++L +L L ++ + + T L
Sbjct: 195 TTFLGLLRLTELHLEHNQFSRINFF--LFPRLLNLQALYLQWNRIRTVVQGSPWTWHT-L 251
Query: 216 RTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLI 275
+ L LSGN + D ++ + L LH L+L + +S + + + ++++ N +
Sbjct: 252 QKLDLSGNEIQILDPAI-FRCLPNLHTLNLESNKISNVSLEVVSSWISISTINLAGN-IW 309
Query: 276 DAFTALLSPLES 287
D +++ PL S
Sbjct: 310 DCSSSIC-PLVS 320
Score = 148 (57.2 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 66/249 (26%), Positives = 107/249 (42%)
Query: 93 LMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISN 152
L L +L + P F +LN L L L N + S +D L L +L L L + I+
Sbjct: 62 LSLRYNSLLLLLPYQFAHLNQLVWLYLDHNSI-STVD-RLAFQGLRRLKELILSSNKIAQ 119
Query: 153 LPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNA 212
L + F LRNL+L+ N++ DL G L L +L L + +++ + F+
Sbjct: 120 LQNGTFETVPNLRNLDLSYNQMQDLVPGHFHG--LRKLQNLHLRSNNIRS-IPVRTFMEC 176
Query: 213 TKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHN 272
L L L N L + L L +L L L + SR+ F R LQ L + N
Sbjct: 177 RSLEFLDLGYNRLRTITRTTFLG-LLRLTELHLEHNQFSRINFFLFPRLLNLQALYLQWN 235
Query: 273 PLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQN 332
+ +L+ LD+ + +Q + + F + +L TL L NK+ + + +
Sbjct: 236 RIRTVVQGSPWTWHTLQKLDLSGNEIQILDPAIFRCLPNLHTLNLESNKISNVSLEVVSS 295
Query: 333 LTHLSVLEL 341
+S + L
Sbjct: 296 WISISTINL 304
Score = 140 (54.3 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 63/232 (27%), Positives = 95/232 (40%)
Query: 143 LDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKG 202
L LR + + L FA+ L L L N + +D Q L L L LS+ +
Sbjct: 62 LSLRYNSLLLLLPYQFAHLNQLVWLYLDHNSISTVDRLAF--QGLRRLKELILSSNKI-A 118
Query: 203 PLSEDAFVNATKLRTLYLSGNPLSAADLSVA-LKPLTKLHRLSLRNCGLSRLPANTFHRF 261
L F LR L LS N + DL L KL L LR+ + +P TF
Sbjct: 119 QLQNGTFETVPNLRNLDLSYNQMQ--DLVPGHFHGLRKLQNLHLRSNNIRSIPVRTFMEC 176
Query: 262 TCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNK 321
L+ LD+ +N L L L L + ++ RI+ F ++ +L+ L L N+
Sbjct: 177 RSLEFLDLGYNRLRTITRTTFLGLLRLTELHLEHNQFSRINFFLFPRLLNLQALYLQWNR 236
Query: 322 LETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPL 373
+ T+ G L L+L+ + L+ +F P+L L L N +
Sbjct: 237 IRTVVQGSPWTWHTLQKLDLSGNEIQILDPAIFR---CLPNLHTLNLESNKI 285
Score = 134 (52.2 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 61/215 (28%), Positives = 93/215 (43%)
Query: 19 LITINLNANPIQPVEG-AFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLR 77
L+ + L+ N I V+ AF R L L + ++++ F + L LDLS N ++
Sbjct: 83 LVWLYLDHNSISTVDRLAFQGLRRLKELILSSNKIAQLQNGTFETVPNLRNLDLSYNQMQ 142
Query: 78 IIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNL 137
+ PG F L L+ L L N+ I F L+ L+L N+L++ I T LG L
Sbjct: 143 DLVPGHFHGLRKLQNLHLRSNNIRSIPVRTFMECRSLEFLDLGYNRLRT-ITRTTFLGLL 201
Query: 138 GKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSN 197
+L L L + S + +F L+ L L N + + + + L LDLS
Sbjct: 202 -RLTELHLEHNQFSRINFFLFPRLLNLQALYLQWNRIRTVVQGSPWTWHT--LQKLDLSG 258
Query: 198 CHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSV 232
++ L F L TL L N +S L V
Sbjct: 259 NEIQ-ILDPAIFRCLPNLHTLNLESNKISNVSLEV 292
Score = 116 (45.9 bits), Expect = 9.6e-07, Sum P(2) = 9.6e-07
Identities = 60/251 (23%), Positives = 102/251 (40%)
Query: 249 GLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLK 308
G +P N C Q L + +N L+ + L L L + ++++ + R F
Sbjct: 47 GFQDVPENI--SLGC-QGLSLRYNSLLLLLPYQFAHLNQLVWLYLDHNSISTVDRLAFQG 103
Query: 309 MTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRL 368
+ LK LILS NK+ L++G F+ + +L L+L+ + L FH L+ L L
Sbjct: 104 LRRLKELILSSNKIAQLQNGTFETVPNLRNLDLSYNQMQDLVPGHFHG---LRKLQNLHL 160
Query: 369 SGNPLHVLPDSTKQ-----------YS-MRTIPTQIWKNFDFLVILFILNETVFHENY-T 415
N + +P T Y+ +RTI + L L + + N+
Sbjct: 161 RSNNIRSIPVRTFMECRSLEFLDLGYNRLRTITRTTFLGLLRLTELHLEHNQFSRINFFL 220
Query: 416 YP---DLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSL 472
+P +L+ L L N + + G+ +I L P +F N+ +L
Sbjct: 221 FPRLLNLQALYLQWNRIRTVVQGSPWTWHTLQKLDLSGN--EIQILDPAIFRCLPNLHTL 278
Query: 473 NLANNNLSMTS 483
NL +N +S S
Sbjct: 279 NLESNKISNVS 289
Score = 110 (43.8 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 56/250 (22%), Positives = 101/250 (40%)
Query: 237 LTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYS 296
L +L L L + +S + F L+EL +S N + + +L +LD+ Y+
Sbjct: 80 LNQLVWLYLDHNSISTVDRLAFQGLRRLKELILSSNKIAQLQNGTFETVPNLRNLDLSYN 139
Query: 297 NLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHE 356
+Q + F + L+ L L N + ++ F L L+L L + T F
Sbjct: 140 QMQDLVPGHFHGLRKLQNLHLRSNNIRSIPVRTFMECRSLEFLDLGYNRLRTITRTTF-- 197
Query: 357 NYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHEN-YT 415
L LRL+ LH+ + + + P + N L + + TV + +T
Sbjct: 198 ------LGLLRLT--ELHLEHNQFSRINFFLFPRLL--NLQALYLQWNRIRTVVQGSPWT 247
Query: 416 YPDLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLA 475
+ L++L LSGN + +L KI + V ++ +I+++NLA
Sbjct: 248 WHTLQKLDLSGNEIQILDPAIFRCLPNLHTLNLESN--KISNVSLEVVSSWISISTINLA 305
Query: 476 NNNLSMTSEL 485
N +S +
Sbjct: 306 GNIWDCSSSI 315
Score = 76 (31.8 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 35/140 (25%), Positives = 57/140 (40%)
Query: 507 THISPTVLRHNRAITSIKLVGNPWKCDCNIADMWEWATREKGDIGVLVGSTTPTEI-GFG 565
+++S V+ +I++I L GN W C +I + W +G + +TP + G
Sbjct: 286 SNVSLEVVSSWISISTINLAGNIWDCSSSICPLVSWLRNFRGTRDASIICSTPKSLQGER 345
Query: 566 A-SRKKKGLVCYFDIFTTPTRKRPGREL-FASTNKTWARYVKEADCPSSKLFRPPRTNSR 623
+ VC ++FT P EL T T YV + P + PRT
Sbjct: 346 VMDAVRNNSVCE-EMFTV----EPTTELTLLLTTTTTTLYVTK---PPTTTTTTPRTT-- 395
Query: 624 KTRAAPSYINMEKLNSKSFL 643
TR ++++L K L
Sbjct: 396 -TRQLSQVTHIQRLTPKVLL 414
>TAIR|locus:2122239 [details] [associations]
symbol:AT4G36180 species:3702 "Arabidopsis thaliana"
[GO:0004672 "protein kinase activity" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA;ISS]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005886 "plasma
membrane" evidence=ISM;IDA] [GO:0006468 "protein phosphorylation"
evidence=IEA;ISS] [GO:0007169 "transmembrane receptor protein
tyrosine kinase signaling pathway" evidence=ISS] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=RCA]
[GO:0000911 "cytokinesis by cell plate formation" evidence=RCA]
[GO:0002237 "response to molecule of bacterial origin"
evidence=RCA] [GO:0006260 "DNA replication" evidence=RCA]
[GO:0006306 "DNA methylation" evidence=RCA] [GO:0007165 "signal
transduction" evidence=RCA] [GO:0008283 "cell proliferation"
evidence=RCA] [GO:0009855 "determination of bilateral symmetry"
evidence=RCA] [GO:0010014 "meristem initiation" evidence=RCA]
[GO:0010073 "meristem maintenance" evidence=RCA] [GO:0010075
"regulation of meristem growth" evidence=RCA] [GO:0010103 "stomatal
complex morphogenesis" evidence=RCA] [GO:0030244 "cellulose
biosynthetic process" evidence=RCA] [GO:0048443 "stamen
development" evidence=RCA] [GO:0051567 "histone H3-K9 methylation"
evidence=RCA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000719
InterPro:IPR001245 InterPro:IPR008271 InterPro:IPR011009
Pfam:PF07714 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
GO:GO:0016021 GO:GO:0005886 GO:GO:0005524 EMBL:CP002687
GenomeReviews:CT486007_GR SUPFAM:SSF56112 GO:GO:0004674
eggNOG:COG4886 Gene3D:2.60.120.200 InterPro:IPR013320 EMBL:AL161588
EMBL:AL022141 InterPro:IPR025875 Pfam:PF12799 HOGENOM:HOG000116551
InterPro:IPR013210 Pfam:PF08263 EMBL:FJ708764 EMBL:AY080606
IPI:IPI00531277 PIR:T04587 RefSeq:NP_195341.2 UniGene:At.2123
ProteinModelPortal:C0LGS2 SMR:C0LGS2 STRING:C0LGS2 PaxDb:C0LGS2
PRIDE:C0LGS2 EnsemblPlants:AT4G36180.1 GeneID:829775
KEGG:ath:AT4G36180 GeneFarm:2360 TAIR:At4g36180 InParanoid:O65510
OMA:NCSSLVH PhylomeDB:C0LGS2 ProtClustDB:CLSN2682550 Uniprot:C0LGS2
Length = 1136
Score = 210 (79.0 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 98/335 (29%), Positives = 140/335 (41%)
Query: 41 SLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNL 100
SL +L + T S P NLT L L+LS N L P L SL+YL L+ L
Sbjct: 163 SLQFLDISSNTFSGQIPSGLANLTQLQLLNLSYNQLTGEIPASLGNLQSLQYLWLDFNLL 222
Query: 101 TYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISN-LPDNVFA 159
PSA N + L L S+N++ I G L KL+ L L + S +P ++F
Sbjct: 223 QGTLPSAISNCSSLVHLSASENEIGGVIP--AAYGALPKLEVLSLSNNNFSGTVPFSLFC 280
Query: 160 NNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKG--PLSEDAFVNATKLRT 217
N T L + L N D+ T L LDL + G PL N L+
Sbjct: 281 N-TSLTIVQLGFNAFSDIVRPETTANCRTGLQVLDLQENRISGRFPLW---LTNILSLKN 336
Query: 218 LYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLS-RLPANTFHRFTCLQELDISHNPLID 276
L +SGN L + ++ + L +L L L N L+ +P + L LD N L
Sbjct: 337 LDVSGN-LFSGEIPPDIGNLKRLEELKLANNSLTGEIPVE-IKQCGSLDVLDFEGNSLKG 394
Query: 277 AFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHL 336
L +++L+ L +G ++ S+ + + L+ L L N L LT L
Sbjct: 395 QIPEFLGYMKALKVLSLGRNSFSGYVPSSMVNLQQLERLNLGENNLNGSFPVELMALTSL 454
Query: 337 SVLELNNCGLTRLNETVFHENYTYPDLEELRLSGN 371
S L+L+ R + V +L L LSGN
Sbjct: 455 SELDLSG---NRFSGAVPVSISNLSNLSFLNLSGN 486
Score = 191 (72.3 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 118/480 (24%), Positives = 200/480 (41%)
Query: 22 INLNANPIQ-PVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIE 80
+NL+ N + + + +SL YL++ L P +N ++L L S N + +
Sbjct: 191 LNLSYNQLTGEIPASLGNLQSLQYLWLDFNLLQGTLPSAISNCSSLVHLSASENEIGGVI 250
Query: 81 PGVFDPLTSLEYLMLNRCNLTYISP-SAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGK 139
P + L LE L L+ N + P S F N + L ++L N +
Sbjct: 251 PAAYGALPKLEVLSLSNNNFSGTVPFSLFCNTS-LTIVQLGFNAFSDIVRPETTANCRTG 309
Query: 140 LDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCH 199
L LDL+++ IS N L+NL+++ N L ++ +G NL L+ L L+N
Sbjct: 310 LQVLDLQENRISGRFPLWLTNILSLKNLDVSGN-LFSGEIPPDIG-NLKRLEELKLANNS 367
Query: 200 LKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSL-RNCGLSRLPANTF 258
L G + + L L GN L + L + L LSL RN +P++
Sbjct: 368 LTGEIPVE-IKQCGSLDVLDFEGNSLKG-QIPEFLGYMKALKVLSLGRNSFSGYVPSSMV 425
Query: 259 HRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILS 318
+ L+ L++ N L +F L L SL LD+ + + +++L L LS
Sbjct: 426 N-LQQLERLNLGENNLNGSFPVELMALTSLSELDLSGNRFSGAVPVSISNLSNLSFLNLS 484
Query: 319 GNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLH-VLP 377
GN NL L+ L+L+ ++ V E P+++ + L GN V+P
Sbjct: 485 GNGFSGEIPASVGNLFKLTALDLSK---QNMSGEVPVELSGLPNVQVIALQGNNFSGVVP 541
Query: 378 DS-----TKQY---SMRTIPTQIWKNFDFLVILFILNETVFHENYTYPD-------LEEL 422
+ + +Y S + +I + F FL +L L+ + H + + P LE L
Sbjct: 542 EGFSSLVSLRYVNLSSNSFSGEIPQTFGFLRLLVSLSLSDNHISGSIPPEIGNCSALEVL 601
Query: 423 RLSGNPL--HVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNLS 480
L N L H+ + +I PP + + + ++ SL+L +N+LS
Sbjct: 602 ELRSNRLMGHIPADLSRLPRLKVLDLGQNNLSGEI---PPEI-SQSSSLNSLSLDHNHLS 657
Score = 177 (67.4 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 85/318 (26%), Positives = 133/318 (41%)
Query: 57 PQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKT 116
P+F + L L L N P L LE L L NL P L L
Sbjct: 397 PEFLGYMKALKVLSLGRNSFSGYVPSSMVNLQQLERLNLGENNLNGSFPVELMALTSLSE 456
Query: 117 LELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISN-LPDNVFANNTWLRNLNLAENELI 175
L+LS N+ + + + NL L L+L +G S +P +V N L L+L++ +
Sbjct: 457 LDLSGNRFSGAVP--VSISNLSNLSFLNLSGNGFSGEIPASV-GNLFKLTALDLSKQNMS 513
Query: 176 DLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALK 235
+V L L ++ + L + G + E F + LR + LS N S ++
Sbjct: 514 G-EVPVELS-GLPNVQVIALQGNNFSGVVPE-GFSSLVSLRYVNLSSNSFSG-EIPQTFG 569
Query: 236 PLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGY 295
L L LSL + +S + L+ L++ N L+ A LS L L+ LD+G
Sbjct: 570 FLRLLVSLSLSDNHISGSIPPEIGNCSALEVLELRSNRLMGHIPADLSRLPRLKVLDLGQ 629
Query: 296 SNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLEL--NNC-GLTRLNET 352
+NL + +SL +L L N L + G F L++L+ ++L NN G +
Sbjct: 630 NNLSGEIPPEISQSSSLNSLSLDHNHLSGVIPGSFSGLSNLTKMDLSVNNLTGEIPASLA 689
Query: 353 VFHENYTYPDLEELRLSG 370
+ N Y ++ L G
Sbjct: 690 LISSNLVYFNVSSNNLKG 707
Score = 157 (60.3 bits), Expect = 6.9e-07, Sum P(2) = 6.9e-07
Identities = 101/347 (29%), Positives = 146/347 (42%)
Query: 13 NLDNP-GLITINLNANPIQPVE--GAFLVARSLLYLYMQECTLS-KINPQFFTNLTTLNK 68
NL +P G +T + P P + G + + + LS +I+ + + L L K
Sbjct: 38 NLHDPLGALTSWDPSTPAAPCDWRGVGCTNHRVTEIRLPRLQLSGRISDRI-SGLRMLRK 96
Query: 69 LDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHI 128
L L N P T L + L +L+ P A NL L+ ++ N+L I
Sbjct: 97 LSLRSNSFNGTIPTSLAYCTRLLSVFLQYNSLSGKLPPAMRNLTSLEVFNVAGNRLSGEI 156
Query: 129 DWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLV 188
+G L LD+ + S + AN T L+ LNL+ N+L ++ +LG NL
Sbjct: 157 P----VGLPSSLQFLDISSNTFSGQIPSGLANLTQLQLLNLSYNQLTG-EIPASLG-NLQ 210
Query: 189 HLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNC 248
L L L L+G L A N + L L S N + + A L KL LSL N
Sbjct: 211 SLQYLWLDFNLLQGTLPS-AISNCSSLVHLSASENEIGGV-IPAAYGALPKLEVLSLSNN 268
Query: 249 GLS-RLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYS--NLQ--RISR 303
S +P + F T L + + N AF+ ++ P E+ + G +LQ RIS
Sbjct: 269 NFSGTVPFSLFCN-TSLTIVQLGFN----AFSDIVRP-ETTANCRTGLQVLDLQENRISG 322
Query: 304 STFLKMT---SLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLT 347
L +T SLK L +SGN NL L L+L N LT
Sbjct: 323 RFPLWLTNILSLKNLDVSGNLFSGEIPPDIGNLKRLEELKLANNSLT 369
Score = 135 (52.6 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 51/180 (28%), Positives = 86/180 (47%)
Query: 47 MQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPS 106
+Q S + P+ F++L +L ++LS N P F L L L L+ +++ P
Sbjct: 531 LQGNNFSGVVPEGFSSLVSLRYVNLSSNSFSGEIPQTFGFLRLLVSLSLSDNHISGSIPP 590
Query: 107 AFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISN-LPDNVFANNTWLR 165
N + L+ LEL N+L HI L L +L LDL Q+ +S +P + +++ L
Sbjct: 591 EIGNCSALEVLELRSNRLMGHIPADL--SRLPRLKVLDLGQNNLSGEIPPEISQSSS-LN 647
Query: 166 NLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPL 225
+L+L N L + + G L +L +DLS +L G + + ++ L +S N L
Sbjct: 648 SLSLDHNHLSGVIPGSFSG--LSNLTKMDLSVNNLTGEIPASLALISSNLVYFNVSSNNL 705
Score = 45 (20.9 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 460 PNVFNNTRNITSLNLANNNLS 480
P F+ N+T ++L+ NNL+
Sbjct: 661 PGSFSGLSNLTKMDLSVNNLT 681
>UNIPROTKB|Q2EEY0 [details] [associations]
symbol:TLR9 "Uncharacterized protein" species:9796 "Equus
caballus" [GO:0035197 "siRNA binding" evidence=ISS] [GO:0045078
"positive regulation of interferon-gamma biosynthetic process"
evidence=ISS] [GO:0045356 "positive regulation of interferon-alpha
biosynthetic process" evidence=ISS] [GO:0045359 "positive
regulation of interferon-beta biosynthetic process" evidence=ISS]
InterPro:IPR000157 InterPro:IPR001611 InterPro:IPR027181
Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450 GO:GO:0005783
GO:GO:0005886 GO:GO:0007165 GO:GO:0006955 GO:GO:0005768
GO:GO:0045944 InterPro:IPR003591 SMART:SM00369 GO:GO:0032755
GO:GO:0030277 GO:GO:0005764 GO:GO:0051607 GO:GO:0050727
GO:GO:0032715 GO:GO:0032009 GO:GO:0035197 GO:GO:0032760
GO:GO:0032735 GO:GO:0051770 GO:GO:0045078 GO:GO:0032733
GO:GO:0032728 SUPFAM:SSF52200 GO:GO:0045359
GeneTree:ENSGT00680000099674 GO:GO:0032741 GO:GO:0045356
HOGENOM:HOG000230468 HOVERGEN:HBG018601 PANTHER:PTHR24373:SF37
OMA:VGGNCRR CTD:54106 KO:K10161 EMBL:DQ390541 RefSeq:NP_001075259.1
UniGene:Eca.12487 STRING:Q2EEY0 Ensembl:ENSECAT00000014884
GeneID:100009693 KEGG:ecb:100009693 InParanoid:Q2EEY0
Uniprot:Q2EEY0
Length = 1031
Score = 204 (76.9 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 126/472 (26%), Positives = 209/472 (44%)
Query: 45 LYMQECTLSKINPQFFTNLTTLNKLDLSGNPLR--IIEPGVFDPLTSLEYLMLN-----R 97
L +++ +L ++NP++F L L LDLS N L I + F L L L L+ +
Sbjct: 289 LVLKDSSLYQLNPRWFRGLGNLTVLDLSENFLYDCITKTKAFQGLAQLRRLNLSFNYHKK 348
Query: 98 CNLTYIS--PSAFDNLNHLKTLELSQNKLKSHIDWTLV-LGNLGKLDTLDLRQSGISNLP 154
+ +++ PS F +L L+ L++ +S TL L L L L L+ + I+
Sbjct: 349 VSFAHLTLAPS-FGSLLSLQELDMHGIFFRSLSQKTLQPLARLPMLQRLYLQMNFINQAQ 407
Query: 155 DNVFANNTWLRNLNLAENELIDL--DVATTL---GQNLVHLDSLDLSNCHLKGPLSEDAF 209
+F + LR ++L++N + VATT G V L S DL+ L P SED
Sbjct: 408 LGIFKDFPGLRYIDLSDNRISGAVEPVATTGEVDGGKKVWLTSRDLTPGPLDTPSSEDFM 467
Query: 210 VNATKLR-TLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSR-LPANTFHRFTCLQEL 267
+ L TL LS N L + + L++L L L + +S+ + + F T LQ L
Sbjct: 468 PSCKNLSFTLDLSRNNLVTVQPEMFAQ-LSRLQCLRLSHNSISQAVNGSQFVPLTSLQVL 526
Query: 268 DISHNPLIDAFTAL-LSPLESLEHLDMGYSN----LQRISRS-TFL-KMTSLKTLILSGN 320
D+SHN L D + + L LE LD+ Y++ ++ + + +F+ ++ +L+ L L+ N
Sbjct: 527 DLSHNKL-DLYHGRSFTELPRLEALDLSYNSQPFSMRGVGHNLSFVAQLPTLRYLSLAHN 585
Query: 321 KLETLESGLFQNLTHLSVLELNNCGLTRL-NETVFHENYTYP--DLEELRLSGNPLHVLP 377
+ + S + T L L+ + L+++ E + + L L LS N LH L
Sbjct: 586 GIHSRVSQQLCS-TSLWALDFSGNSLSQMWAEGDLYLRFFQGLRSLIRLDLSQNRLHTLL 644
Query: 378 DSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTYPDLEELRLSGNPLHVLPTGNX 437
T +++ +N ++L + T+ P+LE L L+GN L L G+
Sbjct: 645 PCTLGNLPKSLQLLRLRN-NYLAFFNWSSLTLL------PNLETLDLAGNQLKALSNGSL 697
Query: 438 XXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSFQF 489
I ++ P F + LNL+ N L F F
Sbjct: 698 PSGTQLQRLDVSRNS--IIFVVPGFFALATRLRELNLSANALRTVEPSWFGF 747
Score = 168 (64.2 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 89/321 (27%), Positives = 138/321 (42%)
Query: 66 LNKLDLSGNPLRIIEPGVFDP-LTSLEYLM-LNRCNLTYISPSAFDNLNHLKTLELSQNK 123
L DL+ PL F P +L + + L+R NL + P F L+ L+ L LS N
Sbjct: 448 LTSRDLTPGPLDTPSSEDFMPSCKNLSFTLDLSRNNLVTVQPEMFAQLSRLQCLRLSHNS 507
Query: 124 LKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAEN-ELIDL-DVAT 181
+ ++ + + L L LDL + + F L L+L+ N + + V
Sbjct: 508 ISQAVNGSQFVP-LTSLQVLDLSHNKLDLYHGRSFTELPRLEALDLSYNSQPFSMRGVGH 566
Query: 182 TLG--QNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSA----ADLSVAL- 234
L L L L L++ + +S+ + +T L L SGN LS DL +
Sbjct: 567 NLSFVAQLPTLRYLSLAHNGIHSRVSQQ--LCSTSLWALDFSGNSLSQMWAEGDLYLRFF 624
Query: 235 KPLTKLHRLSLRNCGL-SRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDM 293
+ L L RL L L + LP + LQ L + +N L + L+ L +LE LD+
Sbjct: 625 QGLRSLIRLDLSQNRLHTLLPCTLGNLPKSLQLLRLRNNYLAFFNWSSLTLLPNLETLDL 684
Query: 294 GYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETV 353
+ L+ +S + T L+ L +S N + + G F T L L L+ L + +
Sbjct: 685 AGNQLKALSNGSLPSGTQLQRLDVSRNSIIFVVPGFFALATRLRELNLSANALRTVEPSW 744
Query: 354 FHENYTYPDLEELRLSGNPLH 374
F + LE L +S NPLH
Sbjct: 745 F--GFLAGSLEVLDVSANPLH 763
Score = 149 (57.5 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 93/337 (27%), Positives = 147/337 (43%)
Query: 41 SLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRI-------IE-P--------GVF 84
SL YL + + + P+ NLT L LD+ GN R +E P F
Sbjct: 221 SLEYLLLSYNHIVTLAPEDLANLTALRVLDVGGNCRRCDHARNPCVECPHKFPQLHSDTF 280
Query: 85 DPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLD 144
L+ LE L+L +L ++P F L +L L+LS+N L I T L +L L+
Sbjct: 281 SHLSRLEGLVLKDSSLYQLNPRWFRGLGNLTVLDLSENFLYDCITKTKAFQGLAQLRRLN 340
Query: 145 LRQSGISNLPDNV-FANNTWLRN----LNLAENELIDLDVATTLGQNLVHLDSLD-LSNC 198
L N V FA+ T + L+L E ++ + + + L L L L
Sbjct: 341 LS----FNYHKKVSFAHLTLAPSFGSLLSLQELDMHGIFFRSLSQKTLQPLARLPMLQRL 396
Query: 199 HLKGPLSEDAFVNATK----LRTLYLSGNPLSAADLSVALK-PLTKLHRLSLRNCGLSRL 253
+L+ A + K LR + LS N +S A VA + ++ L + L+
Sbjct: 397 YLQMNFINQAQLGIFKDFPGLRYIDLSDNRISGAVEPVATTGEVDGGKKVWLTSRDLTPG 456
Query: 254 PANT--FHRF--TCLQ---ELDISHNPLIDAFTALLSPLESLEHLDMGYSNL-QRISRST 305
P +T F +C LD+S N L+ + + L L+ L + ++++ Q ++ S
Sbjct: 457 PLDTPSSEDFMPSCKNLSFTLDLSRNNLVTVQPEMFAQLSRLQCLRLSHNSISQAVNGSQ 516
Query: 306 FLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELN 342
F+ +TSL+ L LS NKL+ F L L L+L+
Sbjct: 517 FVPLTSLQVLDLSHNKLDLYHGRSFTELPRLEALDLS 553
Score = 138 (53.6 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 89/346 (25%), Positives = 151/346 (43%)
Query: 50 CTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFD 109
C ++ I P F + TL +L+LS N + + P + P +SL L+L+R N+ + P++
Sbjct: 110 CHMT-IEPNTFLAVPTLEELNLSYNGITTV-PAL--P-SSLVSLILSRTNILQLDPTSLT 164
Query: 110 NLNHLKTLELSQN-KLKSHIDWTL------VLGNLGKLDTLDLRQSGISNLPDNVFANNT 162
L+ L+ L + N K+ L +LG LG L L L+ + ++ +P ++ +
Sbjct: 165 GLHALRFLYMDGNCYYKNPCGRALEVAPGALLG-LGNLTHLSLKYNNLTTVPRSLPPS-- 221
Query: 163 WLRNLNLAENELIDLDVATTLGQNLVHLDSLDLS-NC----HLKGPLSEDAFVNATKLRT 217
L L L+ N ++ L L NL L LD+ NC H + P E K
Sbjct: 222 -LEYLLLSYNHIVTL-APEDLA-NLTALRVLDVGGNCRRCDHARNPCVECPH----KFPQ 274
Query: 218 LYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDA 277
L+ S L++L L L++ L +L F L LD+S N L D
Sbjct: 275 LH-----------SDTFSHLSRLEGLVLKDSSLYQLNPRWFRGLGNLTVLDLSENFLYDC 323
Query: 278 FTAL--LSPLESLEHLDMGYSNLQRISRS------TFLKMTSLKTLILSGNKLETLESGL 329
T L L L++ ++ +++S + +F + SL+ L + G +L
Sbjct: 324 ITKTKAFQGLAQLRRLNLSFNYHKKVSFAHLTLAPSFGSLLSLQELDMHGIFFRSLSQKT 383
Query: 330 FQNLTHLSVLELNNCGLTRLNET---VFHE--NYTYPDLEELRLSG 370
Q L L +L+ + +N+ +F + Y DL + R+SG
Sbjct: 384 LQPLARLPMLQRLYLQMNFINQAQLGIFKDFPGLRYIDLSDNRISG 429
>UNIPROTKB|F1PUU4 [details] [associations]
symbol:FLII "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003779 "actin binding" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007122 PRINTS:PR00597
PROSITE:PS51450 SMART:SM00262 InterPro:IPR007123 PANTHER:PTHR11977
Pfam:PF00626 InterPro:IPR025875 Pfam:PF12799
GeneTree:ENSGT00660000095502 EMBL:AAEX03003715
Ensembl:ENSCAFT00000029049 Uniprot:F1PUU4
Length = 1273
Score = 205 (77.2 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 81/285 (28%), Positives = 135/285 (47%)
Query: 7 VYNDRRNLDNPGLITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTL 66
V +D LD+ L ++L+ N + A+++L L + ++ I Q F NLT L
Sbjct: 96 VPDDIFKLDD--LSVLDLSYNQLTECPRELENAKNMLVLNLSHNSIDTIPNQLFINLTDL 153
Query: 67 NKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKS 126
LDLS N L + P + L L+ L+LN L + L L+TL L +N ++
Sbjct: 154 LYLDLSENRLESLPPQM-RRLVHLQTLVLNGNPLLHAQLRQLPALMALQTLHL-RNTQRT 211
Query: 127 HIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQN 186
+ L L L +DL + ++ +P+ ++ + LR LNL+ N++ +L +
Sbjct: 212 QSNLPTSLEGLSNLADVDLSCNDLTRVPECLYTLPS-LRRLNLSSNQISELSLCI---DQ 267
Query: 187 LVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLR 246
VH+++L+LS L S A TKL+ LYL+ N L L + L L
Sbjct: 268 WVHVETLNLSRNQLTSLPS--AICKLTKLKKLYLNSNKLDFDGLPSGIGKLASLEEFMAA 325
Query: 247 NCGLSRLPANTFHRFTCLQELDISHNPLIDAFTAL--LSPLESLE 289
N L +P + R T L++L ++ N L+ A+ L+ +E L+
Sbjct: 326 NNNLELIP-ESLCRCTKLRKLVLNKNRLVTLPEAIHFLTEIEVLD 369
Score = 193 (73.0 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 94/341 (27%), Positives = 152/341 (44%)
Query: 41 SLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNL 100
SL +L + L + P+ L L L +S N L + G L SL ++ +L
Sbjct: 34 SLRWLKLNRTGLCYL-PEELAALQKLEHLSVSHNNLTTLH-GELSSLPSLRAIVARANSL 91
Query: 101 TYIS-PSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFA 159
P L+ L L+LS N+L + L N + L+L + I +P+ +F
Sbjct: 92 KNSGVPDDIFKLDDLSVLDLSYNQLT---ECPRELENAKNMLVLNLSHNSIDTIPNQLFI 148
Query: 160 NNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLS-NCHLKGPLSEDAFVNATKLRTL 218
N T L L+L+EN L L + LVHL +L L+ N L L + + A L+TL
Sbjct: 149 NLTDLLYLDLSENRLESLPPQM---RRLVHLQTLVLNGNPLLHAQLRQLPALMA--LQTL 203
Query: 219 YLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAF 278
+L + ++L +L+ L+ L + L L+R+P + L+ L++S N I
Sbjct: 204 HLRNTQRTQSNLPTSLEGLSNLADVDLSCNDLTRVP-ECLYTLPSLRRLNLSSNQ-ISEL 261
Query: 279 TALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSV 338
+ + +E L++ + L + S K+T LK L L+ NKL+ GL + L+
Sbjct: 262 SLCIDQWVHVETLNLSRNQLTSLP-SAICKLTKLKKLYLNSNKLDF--DGLPSGIGKLAS 318
Query: 339 LELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDS 379
LE L E + L +L L+ N L LP++
Sbjct: 319 LEEFMAANNNL-ELIPESLCRCTKLRKLVLNKNRLVTLPEA 358
Score = 176 (67.0 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 85/322 (26%), Positives = 147/322 (45%)
Query: 22 INLNANPIQPVEGAFLVARSLLYLYMQECTLSKIN-PQFFTNLTTLNKLDLSGNPLRIIE 80
++++ N + + G SL + + +L P L L+ LDLS N L
Sbjct: 61 LSVSHNNLTTLHGELSSLPSLRAIVARANSLKNSGVPDDIFKLDDLSVLDLSYNQLTEC- 119
Query: 81 PGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKL 140
P + ++ L L+ ++ I F NL L L+LS+N+L+S + L L
Sbjct: 120 PRELENAKNMLVLNLSHNSIDTIPNQLFINLTDLLYLDLSENRLES---LPPQMRRLVHL 176
Query: 141 DTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHL 200
TL L + + + L+ L+L + ++ T+L + L +L +DLS C+
Sbjct: 177 QTLVLNGNPLLHAQLRQLPALMALQTLHLRNTQRTQSNLPTSL-EGLSNLADVDLS-CND 234
Query: 201 KGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHR 260
+ E + LR L LS N +S +LS+ + + L+L L+ LP+ +
Sbjct: 235 LTRVPECLYT-LPSLRRLNLSSNQIS--ELSLCIDQWVHVETLNLSRNQLTSLPS-AICK 290
Query: 261 FTCLQELDISHNPL-IDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSG 319
T L++L ++ N L D + + L SLE +NL+ I S + T L+ L+L+
Sbjct: 291 LTKLKKLYLNSNKLDFDGLPSGIGKLASLEEFMAANNNLELIPES-LCRCTKLRKLVLNK 349
Query: 320 NKLETLESGLFQNLTHLSVLEL 341
N+L TL + LT + VL++
Sbjct: 350 NRLVTLPEAI-HFLTEIEVLDV 370
Score = 169 (64.5 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 100/337 (29%), Positives = 154/337 (45%)
Query: 69 LDLSGNPLRI-IEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKS- 126
+DL GN R P +TSL +L LNR L Y+ P L L+ L +S N L +
Sbjct: 13 VDLIGNTSRGGYFPENVKAMTSLRWLKLNRTGLCYL-PEELAALQKLEHLSVSHNNLTTL 71
Query: 127 HIDWTLVLGNLGKLDTLDLRQSGISN--LPDNVFANNTWLRNLNLAENELID----LDVA 180
H + L +L L + R + + N +PD++F + L L+L+ N+L + L+ A
Sbjct: 72 HGE----LSSLPSLRAIVARANSLKNSGVPDDIFKLDD-LSVLDLSYNQLTECPRELENA 126
Query: 181 TT-LGQNLVHLDSLD-LSN---CHLKGPLSEDAFVNATK-----------LRTLYLSGNP 224
L NL H +S+D + N +L L D N + L+TL L+GNP
Sbjct: 127 KNMLVLNLSH-NSIDTIPNQLFINLTDLLYLDLSENRLESLPPQMRRLVHLQTLVLNGNP 185
Query: 225 LSAADLSVALKPLTKLHRLSLRNCGLSRLPANT-FHRFTCLQELDISHNPLIDAFTALLS 283
L A L L L L L LRN ++ T + L ++D+S N L L +
Sbjct: 186 LLHAQLR-QLPALMALQTLHLRNTQRTQSNLPTSLEGLSNLADVDLSCNDLTRVPECLYT 244
Query: 284 PLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNN 343
L SL L++ + + +S + ++TL LS N+L +L S + + LT L L LN+
Sbjct: 245 -LPSLRRLNLSSNQISELSLCID-QWVHVETLNLSRNQLTSLPSAICK-LTKLKKLYLNS 301
Query: 344 CGLTRLNETVFHENY-TYPDLEELRLSGNPLHVLPDS 379
+L+ LEE + N L ++P+S
Sbjct: 302 ---NKLDFDGLPSGIGKLASLEEFMAANNNLELIPES 335
>UNIPROTKB|J9P2Y3 [details] [associations]
symbol:FLII "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003779 "actin binding" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007122 PRINTS:PR00597
PROSITE:PS51450 SMART:SM00262 InterPro:IPR007123 PANTHER:PTHR11977
Pfam:PF00626 InterPro:IPR025875 Pfam:PF12799
GeneTree:ENSGT00660000095502 OMA:MEEWNED CTD:2314 EMBL:AAEX03003715
RefSeq:XP_536659.4 Ensembl:ENSCAFT00000047161 GeneID:479521
KEGG:cfa:479521 Uniprot:J9P2Y3
Length = 1278
Score = 205 (77.2 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 81/285 (28%), Positives = 135/285 (47%)
Query: 7 VYNDRRNLDNPGLITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTL 66
V +D LD+ L ++L+ N + A+++L L + ++ I Q F NLT L
Sbjct: 101 VPDDIFKLDD--LSVLDLSYNQLTECPRELENAKNMLVLNLSHNSIDTIPNQLFINLTDL 158
Query: 67 NKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKS 126
LDLS N L + P + L L+ L+LN L + L L+TL L +N ++
Sbjct: 159 LYLDLSENRLESLPPQM-RRLVHLQTLVLNGNPLLHAQLRQLPALMALQTLHL-RNTQRT 216
Query: 127 HIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQN 186
+ L L L +DL + ++ +P+ ++ + LR LNL+ N++ +L +
Sbjct: 217 QSNLPTSLEGLSNLADVDLSCNDLTRVPECLYTLPS-LRRLNLSSNQISELSLCI---DQ 272
Query: 187 LVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLR 246
VH+++L+LS L S A TKL+ LYL+ N L L + L L
Sbjct: 273 WVHVETLNLSRNQLTSLPS--AICKLTKLKKLYLNSNKLDFDGLPSGIGKLASLEEFMAA 330
Query: 247 NCGLSRLPANTFHRFTCLQELDISHNPLIDAFTAL--LSPLESLE 289
N L +P + R T L++L ++ N L+ A+ L+ +E L+
Sbjct: 331 NNNLELIP-ESLCRCTKLRKLVLNKNRLVTLPEAIHFLTEIEVLD 374
Score = 193 (73.0 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 94/341 (27%), Positives = 152/341 (44%)
Query: 41 SLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNL 100
SL +L + L + P+ L L L +S N L + G L SL ++ +L
Sbjct: 39 SLRWLKLNRTGLCYL-PEELAALQKLEHLSVSHNNLTTLH-GELSSLPSLRAIVARANSL 96
Query: 101 TYIS-PSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFA 159
P L+ L L+LS N+L + L N + L+L + I +P+ +F
Sbjct: 97 KNSGVPDDIFKLDDLSVLDLSYNQLT---ECPRELENAKNMLVLNLSHNSIDTIPNQLFI 153
Query: 160 NNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLS-NCHLKGPLSEDAFVNATKLRTL 218
N T L L+L+EN L L + LVHL +L L+ N L L + + A L+TL
Sbjct: 154 NLTDLLYLDLSENRLESLPPQM---RRLVHLQTLVLNGNPLLHAQLRQLPALMA--LQTL 208
Query: 219 YLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAF 278
+L + ++L +L+ L+ L + L L+R+P + L+ L++S N I
Sbjct: 209 HLRNTQRTQSNLPTSLEGLSNLADVDLSCNDLTRVP-ECLYTLPSLRRLNLSSNQ-ISEL 266
Query: 279 TALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSV 338
+ + +E L++ + L + S K+T LK L L+ NKL+ GL + L+
Sbjct: 267 SLCIDQWVHVETLNLSRNQLTSLP-SAICKLTKLKKLYLNSNKLDF--DGLPSGIGKLAS 323
Query: 339 LELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDS 379
LE L E + L +L L+ N L LP++
Sbjct: 324 LEEFMAANNNL-ELIPESLCRCTKLRKLVLNKNRLVTLPEA 363
Score = 176 (67.0 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 85/322 (26%), Positives = 147/322 (45%)
Query: 22 INLNANPIQPVEGAFLVARSLLYLYMQECTLSKIN-PQFFTNLTTLNKLDLSGNPLRIIE 80
++++ N + + G SL + + +L P L L+ LDLS N L
Sbjct: 66 LSVSHNNLTTLHGELSSLPSLRAIVARANSLKNSGVPDDIFKLDDLSVLDLSYNQLTEC- 124
Query: 81 PGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKL 140
P + ++ L L+ ++ I F NL L L+LS+N+L+S + L L
Sbjct: 125 PRELENAKNMLVLNLSHNSIDTIPNQLFINLTDLLYLDLSENRLES---LPPQMRRLVHL 181
Query: 141 DTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHL 200
TL L + + + L+ L+L + ++ T+L + L +L +DLS C+
Sbjct: 182 QTLVLNGNPLLHAQLRQLPALMALQTLHLRNTQRTQSNLPTSL-EGLSNLADVDLS-CND 239
Query: 201 KGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHR 260
+ E + LR L LS N +S +LS+ + + L+L L+ LP+ +
Sbjct: 240 LTRVPECLYT-LPSLRRLNLSSNQIS--ELSLCIDQWVHVETLNLSRNQLTSLPS-AICK 295
Query: 261 FTCLQELDISHNPL-IDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSG 319
T L++L ++ N L D + + L SLE +NL+ I S + T L+ L+L+
Sbjct: 296 LTKLKKLYLNSNKLDFDGLPSGIGKLASLEEFMAANNNLELIPES-LCRCTKLRKLVLNK 354
Query: 320 NKLETLESGLFQNLTHLSVLEL 341
N+L TL + LT + VL++
Sbjct: 355 NRLVTLPEAI-HFLTEIEVLDV 375
Score = 164 (62.8 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 94/318 (29%), Positives = 147/318 (46%)
Query: 87 LTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKS-HIDWTLVLGNLGKLDTLDL 145
+TSL +L LNR L Y+ P L L+ L +S N L + H + L +L L +
Sbjct: 37 MTSLRWLKLNRTGLCYL-PEELAALQKLEHLSVSHNNLTTLHGE----LSSLPSLRAIVA 91
Query: 146 RQSGISN--LPDNVFANNTWLRNLNLAENELID----LDVATT-LGQNLVHLDSLD-LSN 197
R + + N +PD++F + L L+L+ N+L + L+ A L NL H +S+D + N
Sbjct: 92 RANSLKNSGVPDDIFKLDD-LSVLDLSYNQLTECPRELENAKNMLVLNLSH-NSIDTIPN 149
Query: 198 ---CHLKGPLSEDAFVNATK-----------LRTLYLSGNPLSAADLSVALKPLTKLHRL 243
+L L D N + L+TL L+GNPL A L L L L L
Sbjct: 150 QLFINLTDLLYLDLSENRLESLPPQMRRLVHLQTLVLNGNPLLHAQLR-QLPALMALQTL 208
Query: 244 SLRNCGLSRLPANT-FHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRIS 302
LRN ++ T + L ++D+S N L L + L SL L++ + + +S
Sbjct: 209 HLRNTQRTQSNLPTSLEGLSNLADVDLSCNDLTRVPECLYT-LPSLRRLNLSSNQISELS 267
Query: 303 RSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENY-TYP 361
+ ++TL LS N+L +L S + + LT L L LN+ +L+
Sbjct: 268 LCID-QWVHVETLNLSRNQLTSLPSAICK-LTKLKKLYLNS---NKLDFDGLPSGIGKLA 322
Query: 362 DLEELRLSGNPLHVLPDS 379
LEE + N L ++P+S
Sbjct: 323 SLEEFMAANNNLELIPES 340
>UNIPROTKB|E1C7Z9 [details] [associations]
symbol:E1C7Z9 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005615 "extracellular space" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0008045 "motor neuron
axon guidance" evidence=IEA] [GO:0022028 "tangential migration from
the subventricular zone to the olfactory bulb" evidence=IEA]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IEA]
[GO:0033563 "dorsal/ventral axon guidance" evidence=IEA]
[GO:0040023 "establishment of nucleus localization" evidence=IEA]
[GO:0048495 "Roundabout binding" evidence=IEA] [GO:0048846 "axon
extension involved in axon guidance" evidence=IEA] [GO:0050919
"negative chemotaxis" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005737 GO:GO:0005615 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 InterPro:IPR025875
Pfam:PF12799 Pfam:PF01463 GeneTree:ENSGT00700000104083
GO:GO:0050919 EMBL:AADN02046435 EMBL:AADN02046436 EMBL:AADN02046437
EMBL:AADN02046438 EMBL:AADN02046439 EMBL:AADN02046440
EMBL:AADN02046441 EMBL:AADN02046442 IPI:IPI00823289
Ensembl:ENSGALT00000012327 Uniprot:E1C7Z9
Length = 819
Score = 183 (69.5 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 95/365 (26%), Positives = 157/365 (43%)
Query: 15 DNPGLITINLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSG 73
D L + LN N + + E F ++L L + E + I + F T L L L
Sbjct: 114 DMKELERLRLNRNQLHTLPELLFQHNQALSRLDLSENFIQAIPRKAFRGATDLKNLQLDK 173
Query: 74 NPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLV 133
N + IE G F L LE L LN N+T I S+F+++ L+T L N H+
Sbjct: 174 NQISCIEDGAFRALRGLEVLTLNNNNITSIPVSSFNHMPKLRTFRLHSN----HLFCDCH 229
Query: 134 LGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSL 193
L L + LRQ L A LR LN+AE I + + GQ D +
Sbjct: 230 LAWLAQW----LRQRPTIGLFTQCAAP-AQLRGLNVAE---IQKNEFSCSGQ----ADGV 277
Query: 194 DLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRL 253
C L S A + + G L+A ++ + +T++ RL L G+ +
Sbjct: 278 HAQLCSLSSG-SCPAMCTCSN-GIVDCRGKGLTAIPANLP-ETMTEI-RLELN--GIKSI 331
Query: 254 PANTFHRFTCLQEL------DISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFL 307
P F + L+ + D+S+N + + L SL L + + + + + F
Sbjct: 332 PPGAFSPYKKLRRILPLGFRDLSNNQISEIAPDAFQGLRSLNSLVLYGNKITDLPKGVFG 391
Query: 308 KMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELR 367
+ +L+ L+L+ NK+ + + FQ+L +LS+L L + + L + F + ++ L
Sbjct: 392 GLFALQLLLLNANKINCVRADAFQDLQNLSLLSLYDNKIQSLAKGTFT---SLRAIQTLH 448
Query: 368 LSGNP 372
L+ NP
Sbjct: 449 LAQNP 453
Score = 136 (52.9 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 46/156 (29%), Positives = 69/156 (44%)
Query: 218 LYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDA 277
L L+GN ++ + L +L L L +S + F L+ L ++ N L
Sbjct: 73 LELNGNNITRIHKN-DFSGLKQLRVLQLMENQISVVERGAFDDMKELERLRLNRNQLHTL 131
Query: 278 FTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLS 337
L ++L LD+ + +Q I R F T LK L L N++ +E G F+ L L
Sbjct: 132 PELLFQHNQALSRLDLSENFIQAIPRKAFRGATDLKNLQLDKNQISCIEDGAFRALRGLE 191
Query: 338 VLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPL 373
VL LNN +T + + F+ P L RL N L
Sbjct: 192 VLTLNNNNITSIPVSSFNH---MPKLRTFRLHSNHL 224
Score = 122 (48.0 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 46/180 (25%), Positives = 81/180 (45%)
Query: 21 TINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIE 80
T++ + ++ V + + R L + +++I+ F+ L L L L N + ++E
Sbjct: 51 TVDCHGTALRAVPKS--IPRGTERLELNGNNITRIHKNDFSGLKQLRVLQLMENQISVVE 108
Query: 81 PGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKL 140
G FD + LE L LNR L + F + L L+LS+N +++ I G L
Sbjct: 109 RGAFDDMKELERLRLNRNQLHTLPELLFQHNQALSRLDLSENFIQA-IPRKAFRGATD-L 166
Query: 141 DTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHL 200
L L ++ IS + D F L L L N + + V++ ++ L + L + HL
Sbjct: 167 KNLQLDKNQISCIEDGAFRALRGLEVLTLNNNNITSIPVSSF--NHMPKLRTFRLHSNHL 224
Score = 107 (42.7 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 28/89 (31%), Positives = 44/89 (49%)
Query: 289 EHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTR 348
E L++ +N+ RI ++ F + L+ L L N++ +E G F ++ L L LN L
Sbjct: 71 ERLELNGNNITRIHKNDFSGLKQLRVLQLMENQISVVERGAFDDMKELERLRLNRNQLHT 130
Query: 349 LNETVFHENYTYPDLEELRLSGNPLHVLP 377
L E +F N L L LS N + +P
Sbjct: 131 LPELLFQHNQA---LSRLDLSENFIQAIP 156
Score = 106 (42.4 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 69/333 (20%), Positives = 127/333 (38%)
Query: 23 NLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEP 81
+L+ N I + AF RSL L + ++ + F L L L L+ N + +
Sbjct: 352 DLSNNQISEIAPDAFQGLRSLNSLVLYGNKITDLPKGVFGGLFALQLLLLNANKINCVRA 411
Query: 82 GVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKL--KSHIDWTLVLGNLGK 139
F L +L L L + ++ F +L ++TL L+QN ++ W
Sbjct: 412 DAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQNPFVCDCNLKWLADFLRANP 471
Query: 140 LDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNL-VHLDSLDLSNC 198
++T R + L N + + E + N + D + C
Sbjct: 472 IETSGARCASPRRLA-NKRIGQIKSKKFRCSAKEQYFIPGTEDYQLNSECNSDVVCPPKC 530
Query: 199 HLKGPLSEDAFVNATKL--------RTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGL 250
+ + E + + TK+ L L+ N +S + + K L L +++L N +
Sbjct: 531 RCEAGVVECSNLKLTKIPERIPQSTAELRLNNNEISILEATGIFKKLPHLKKINLSNNKV 590
Query: 251 SRLPANTFHRFTCLQELD-ISHNPLIDAFTALLSPLESLEHLDMGYSN-LQRISRSTFLK 308
S + H + + +PL + + L+ L M +N + I +F
Sbjct: 591 SEIEG-IHHAGAIGTNVGPLWGHPLPASRAGAVFCWAQLQPLGMLRNNRISCIHNDSFTG 649
Query: 309 MTSLKTLILSGNKLETLESGLFQNLTHLSVLEL 341
+ +++ L L N++ T+ G F L LS L L
Sbjct: 650 LRNVRLLSLYDNQISTIAPGAFDTLQSLSTLNL 682
Score = 69 (29.3 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 10/39 (25%), Positives = 24/39 (61%)
Query: 509 ISPTVLRHNRAITSIKLVGNPWKCDCNIADMWEWATREK 547
I+P ++++++ L+ NP+ C+C +A + +W + K
Sbjct: 666 IAPGAFDTLQSLSTLNLLANPFNCNCQLAWLGDWLRKRK 704
Score = 62 (26.9 bits), Expect = 9.7e-07, Sum P(2) = 9.7e-07
Identities = 23/83 (27%), Positives = 32/83 (38%)
Query: 454 KIDYLPPNVFNNTRNITSLNLANNNLSMTSELSFQFXXXXXXXXXXXXXXXXXTHISPTV 513
KI LP VF + L L N ++ +FQ + T
Sbjct: 381 KITDLPKGVFGGLFALQLLLLNANKINCVRADAFQDLQNLSLLSLYDNKIQSLAKGTFTS 440
Query: 514 LRHNRAITSIKLVGNPWKCDCNI 536
LR AI ++ L NP+ CDCN+
Sbjct: 441 LR---AIQTLHLAQNPFVCDCNL 460
Score = 45 (20.9 bits), Expect = 4.9e-10, Sum P(2) = 4.9e-10
Identities = 8/34 (23%), Positives = 20/34 (58%)
Query: 454 KIDYLPPNVFNNTRNITSLNLANNNLSMTSELSF 487
+I + P F+ +++++LNL N + +L++
Sbjct: 662 QISTIAPGAFDTLQSLSTLNLLANPFNCNCQLAW 695
>MGI|MGI:1350918 [details] [associations]
symbol:Omd "osteomodulin" species:10090 "Mus musculus"
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] [GO:0007155
"cell adhesion" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 MGI:MGI:1350918 GO:GO:0005578 eggNOG:COG4886
GO:GO:0007155 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GeneTree:ENSGT00600000084286 HOGENOM:HOG000234447
HOVERGEN:HBG108061 CTD:4958 KO:K08124 OrthoDB:EOG415GDJ OMA:FYIPRNL
EMBL:AB007848 IPI:IPI00127402 RefSeq:NP_036180.1 UniGene:Mm.390589
ProteinModelPortal:O35103 SMR:O35103 STRING:O35103 PRIDE:O35103
Ensembl:ENSMUST00000065494 GeneID:27047 KEGG:mmu:27047
UCSC:uc007qjp.1 InParanoid:O35103 NextBio:304973 Bgee:O35103
CleanEx:MM_OMD Genevestigator:O35103 GermOnline:ENSMUSG00000048368
Uniprot:O35103
Length = 423
Score = 197 (74.4 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 73/238 (30%), Positives = 112/238 (47%)
Query: 90 LEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSH-IDWTLVLGNLGKLDTLDLRQS 148
++ L L ++ ++ ++F N HLK + LS NK+KS ID+ V L L L L +
Sbjct: 93 IQQLNLQFNDIEAVTANSFINATHLKEINLSHNKIKSQKIDYG-VFAKLSNLQQLHLEHN 151
Query: 149 GISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGP-LSED 207
+ P F L L L NE+ L T LV++ LDL HL L E
Sbjct: 152 NLEEFP---FPLPKSLERLLLGYNEISILP--TNAMDGLVNVTMLDLCYNHLSDSMLKEK 206
Query: 208 AFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQEL 267
KL L L N L + L + P + ++ LSL N +S +P N F + L L
Sbjct: 207 TLSKMEKLMQLNLCNNRLESMPLGL---PSSLMY-LSLENNSISSIPDNYFDKLPKLHAL 262
Query: 268 DISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETL 325
ISHN L D + + L +L L++G++ L++ F +L+ L L N++E++
Sbjct: 263 RISHNKLEDIPYDIFN-LSNLIELNVGHNKLKQ----AFYIPRNLEHLYLQNNEIESI 315
Score = 154 (59.3 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 57/194 (29%), Positives = 97/194 (50%)
Query: 188 VHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAA--DLSVALKPLTKLHRLSL 245
+H+ L+L ++ ++ ++F+NAT L+ + LS N + + D V K L+ L +L L
Sbjct: 91 MHIQQLNLQFNDIEA-VTANSFINATHLKEINLSHNKIKSQKIDYGVFAK-LSNLQQLHL 148
Query: 246 RNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQ--RISR 303
+ L P F L+ L + +N + T + L ++ LD+ Y++L +
Sbjct: 149 EHNNLEEFP---FPLPKSLERLLLGYNEISILPTNAMDGLVNVTMLDLCYNHLSDSMLKE 205
Query: 304 STFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDL 363
T KM L L L N+LE++ GL +L +LS LE NN ++ + + F + P L
Sbjct: 206 KTLSKMEKLMQLNLCNNRLESMPLGLPSSLMYLS-LE-NN-SISSIPDNYFDK---LPKL 259
Query: 364 EELRLSGNPLHVLP 377
LR+S N L +P
Sbjct: 260 HALRISHNKLEDIP 273
Score = 134 (52.2 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 64/236 (27%), Positives = 107/236 (45%)
Query: 140 LDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCH 199
+ L+L+ + I + N F N T L+ +NL+ N++ + + L +L L L + +
Sbjct: 93 IQQLNLQFNDIEAVTANSFINATHLKEINLSHNKIKSQKIDYGVFAKLSNLQQLHLEHNN 152
Query: 200 LKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSL--RNCGLSRLPANT 257
L+ E F L L L N +S + A+ L + L L + S L T
Sbjct: 153 LE----EFPFPLPKSLERLLLGYNEISILPTN-AMDGLVNVTMLDLCYNHLSDSMLKEKT 207
Query: 258 FHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLIL 317
+ L +L++ +N L L S SL +L + +++ I + F K+ L L +
Sbjct: 208 LSKMEKLMQLNLCNNRLESMPLGLPS---SLMYLSLENNSISSIPDNYFDKLPKLHALRI 264
Query: 318 SGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPL 373
S NKLE + +F NL++L +ELN G +L + Y +LE L L N +
Sbjct: 265 SHNKLEDIPYDIF-NLSNL--IELN-VGHNKLKQAF----YIPRNLEHLYLQNNEI 312
>UNIPROTKB|Q2LDA0 [details] [associations]
symbol:TLR5 "Toll-like receptor 5" species:9913 "Bos
taurus" [GO:0071260 "cellular response to mechanical stimulus"
evidence=IEA] [GO:0034123 "positive regulation of toll-like
receptor signaling pathway" evidence=IEA] [GO:0032757 "positive
regulation of interleukin-8 production" evidence=IEA] [GO:0005149
"interleukin-1 receptor binding" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0050707 "regulation of
cytokine secretion" evidence=IEA] [GO:0045087 "innate immune
response" evidence=IEA] [GO:0042742 "defense response to bacterium"
evidence=IEA] [GO:0034146 "toll-like receptor 5 signaling pathway"
evidence=IEA] [GO:0004888 "transmembrane signaling receptor
activity" evidence=IEA] [GO:0002755 "MyD88-dependent toll-like
receptor signaling pathway" evidence=IEA] Pfam:PF00560
InterPro:IPR000157 InterPro:IPR001611 InterPro:IPR027176
Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450 SMART:SM00255
GO:GO:0016021 GO:GO:0007165 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005622 GO:GO:0032757
GO:GO:0071260 GeneTree:ENSGT00700000104185 SUPFAM:SSF52200
GO:GO:0034123 HOGENOM:HOG000008675 HOVERGEN:HBG023182
PANTHER:PTHR24365:SF7 EMBL:DAAA02042627 EMBL:DQ335128 EMBL:EU006637
EMBL:EU006638 EMBL:EU006639 EMBL:EU006640 EMBL:JQ805125
EMBL:JQ805126 EMBL:JQ805127 EMBL:JQ805128 EMBL:JQ805129
EMBL:JQ805130 EMBL:JQ805131 EMBL:JQ805132 EMBL:JQ805133
EMBL:JQ805134 EMBL:JQ805136 EMBL:JQ805137 IPI:IPI00694158
UniGene:Bt.66307 STRING:Q2LDA0 Ensembl:ENSBTAT00000000604
InParanoid:Q2LDA0 OMA:DHINNIR Uniprot:Q2LDA0
Length = 858
Score = 202 (76.2 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 109/388 (28%), Positives = 174/388 (44%)
Query: 24 LNANPIQPVEGA---FLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIE 80
L+ N I+ V A FL LL L Q L+ I + F NL L LDL G+ + +
Sbjct: 53 LSFNYIRTVTTASFPFLEQLQLLELGTQFTPLT-IYREAFRNLPNLRILDLGGSQINFLH 111
Query: 81 PGVFDPLTSLEYLMLNRCNLT--YISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLG 138
P F L L L L C L+ + F NL L L+LS+NK++S + L
Sbjct: 112 PDAFQGLPHLTKLRLFSCGLSDAVLKDGYFRNLASLTHLDLSKNKIQS-LYLHPSFRELN 170
Query: 139 KLDTLDLRQSGISNLPDNVFA--NNTWLRNLNLAENEL---IDLDVATTLG--QNLVHLD 191
L ++D + I + + F L L+LA+N+L + +D L +N+V L+
Sbjct: 171 SLKSIDFSFNKIPIVCEQEFKPLQGKTLSFLSLADNQLYSRVSVDWNKCLNPFRNMV-LE 229
Query: 192 SLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLS 251
+LD+S + + F NA ++G+ + S+ L T+ H + + G S
Sbjct: 230 TLDVSGNGWGVDIMRN-FSNA-------INGSQI----FSLVL---TR-HIMG-SSFGFS 272
Query: 252 RLPANTFHRFTCLQ-----ELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTF 306
L +H F L +LDISH + + L+ L+ L++ Y+ + ISR+ F
Sbjct: 273 NLKDPDYHTFAGLARSSMIQLDISHGYIFSLNFRIFETLQELKVLNLAYNKINSISRNAF 332
Query: 307 LKMTSLKTLILSGNKLETLESGLFQNLTHLSVLEL--NNCG---------LTRLNETVFH 355
+ +L+ L +S N L L + F L ++ ++L N+ G L +LN
Sbjct: 333 YGLDNLQVLNISYNLLGELYNYDFDGLPKVAYIDLQKNHIGIIQDKTFKFLGKLNTLDLR 392
Query: 356 EN-----YTYPDLEELRLSGNPLHVLPD 378
+N Y P + + LSGN L LP+
Sbjct: 393 DNALKTIYFLPSIPNIFLSGNKLMTLPN 420
Score = 161 (61.7 bits), Expect = 5.4e-08, P = 5.4e-08
Identities = 124/558 (22%), Positives = 227/558 (40%)
Query: 14 LDNPGLITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSG 73
L+ L+ + P+ AF +L L + ++ ++P F L L KL L
Sbjct: 69 LEQLQLLELGTQFTPLTIYREAFRNLPNLRILDLGGSQINFLHPDAFQGLPHLTKLRLFS 128
Query: 74 NPLR--IIEPGVFDPLTSLEYLML--NRCNLTYISPSAFDNLNHLKTLELSQNKLKSHID 129
L +++ G F L SL +L L N+ Y+ PS F LN LK+++ S NK+ +
Sbjct: 129 CGLSDAVLKDGYFRNLASLTHLDLSKNKIQSLYLHPS-FRELNSLKSIDFSFNKIPIVCE 187
Query: 130 WTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELID-LDVATT-LGQNL 187
GK TL + L V + W + LN N +++ LDV+ G ++
Sbjct: 188 QEFKPLQ-GK--TLSFLSLADNQLYSRVSVD--WNKCLNPFRNMVLETLDVSGNGWGVDI 242
Query: 188 VHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVA-LKPLTKLHRLSLR 246
+ + SN + G F + + T ++ G+ ++L L R S+
Sbjct: 243 MR----NFSNA-ING---SQIF---SLVLTRHIMGSSFGFSNLKDPDYHTFAGLARSSMI 291
Query: 247 NCGLSR--LPANTFHRFTCLQEL---DISHNPLIDAFTALLSPLESLEHLDMGYSNLQRI 301
+S + + F F LQEL ++++N + L++L+ L++ Y+ L +
Sbjct: 292 QLDISHGYIFSLNFRIFETLQELKVLNLAYNKINSISRNAFYGLDNLQVLNISYNLLGEL 351
Query: 302 SRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYP 361
F + + + L N + ++ F+ L L+ L+L + L +T+ Y P
Sbjct: 352 YNYDFDGLPKVAYIDLQKNHIGIIQDKTFKFLGKLNTLDLRDNAL----KTI----YFLP 403
Query: 362 DLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILF--------ILNETVF--- 410
+ + LSGN L LP+ + + +N + L L ILN+ F
Sbjct: 404 SIPNIFLSGNKLMTLPNIPLTANFIQLSENRLENLNDLYFLLQVPHLQILILNQNRFSFC 463
Query: 411 HENYTYPD---LEELRLSGNPLHVL-PTGNXXXXXXXXXXXXXXXXCK--IDYLPPNVFN 464
H+N+ + LE+L L N L + TG+ K +++LPP VF+
Sbjct: 464 HQNHAPSENSSLEKLFLGENMLQLAWETGSCWDIFKGLSHLQLLYLNKNYLNFLPPGVFH 523
Query: 465 NTRNITSLNLANNNLSMTSELSFQFXXXXXXXXXXXXXXXXXTHISPTVLRHNRAITSIK 524
+ + L+L +N L++ F + P + ++++I
Sbjct: 524 HLTALRGLSLKDNRLTVL----FPGDLPANLEILDISGNQLLSP-DPDLFA---SLSAID 575
Query: 525 LVGNPWKCDCNIADMWEW 542
+ N + C+C ++ W
Sbjct: 576 ITHNNFICECELSAFIHW 593
>ZFIN|ZDB-GENE-040219-15 [details] [associations]
symbol:tlr5b "toll-like receptor 5b" species:7955
"Danio rerio" [GO:0034146 "toll-like receptor 5 signaling pathway"
evidence=IEA] [GO:0045087 "innate immune response" evidence=IEA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0002755
"MyD88-dependent toll-like receptor signaling pathway"
evidence=IEA] [GO:0050707 "regulation of cytokine secretion"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0001819 "positive regulation of cytokine production"
evidence=IEA] [GO:0042742 "defense response to bacterium"
evidence=IEA] [GO:0004888 "transmembrane signaling receptor
activity" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR000157 InterPro:IPR001611 InterPro:IPR027176
Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450 SMART:SM00255
ZFIN:ZDB-GENE-040219-15 GO:GO:0016021 GO:GO:0007165
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005622 InterPro:IPR025875 Pfam:PF12799
GeneTree:ENSGT00700000104185 SUPFAM:SSF52200 PANTHER:PTHR24365:SF7
EMBL:FP017156 IPI:IPI00883072 Ensembl:ENSDART00000148798
Uniprot:F8W4F1
Length = 885
Score = 202 (76.2 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 119/447 (26%), Positives = 198/447 (44%)
Query: 19 LITINLNANPIQPV-EGAF--LVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNP 75
+ ++L+ N I + E +F L A +L L Q L I F L+ L L L N
Sbjct: 53 ITNVDLSKNRIAELNETSFSHLEALEVLILMHQTPGLV-IRRNSFMRLSNLTSLQLDYNH 111
Query: 76 LRIIEPGVFDPLTSLEYLMLNRCNL--TYISPSAFDNLNHLKTLELSQNKLKSHIDWTLV 133
I+ G F+ L+ L+ L L +C L + +S + L L+ L+LS+N ++ +
Sbjct: 112 HLRIDAGAFNGLSDLKNLTLTQCGLDDSLLSGNFLKPLMSLEMLDLSRNNIRRVQPASFF 171
Query: 134 LGNLGKLDTLDLRQSGISNLPDNVFAN--NTWLRNLNLAENELIDLDVATTLGQNLVHLD 191
L N+ + LDL + + ++ + N L L+ L D++ LG
Sbjct: 172 L-NMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMN-EYWLGWEKCGNP 229
Query: 192 SLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLS 251
+ S L LS + F N + + + +S+ + + ++ +R+ + S
Sbjct: 230 FKNTSITTLD--LSGNGF-NVDMAKRFF---DAISSTKIQSLI--ISNTYRIGKSSGDNS 281
Query: 252 RLP-ANTFH--RFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLK 308
+ P +TF + + ++ D+S++ + ++ S L LE + + S + +I + FL
Sbjct: 282 KDPDKSTFSGLKSSGIKSFDLSNSSIFSLTYSVFSYLSDLEQITLAESQINKIENNAFLG 341
Query: 309 MTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRL 368
MT+L L LS N L ++ FQNL L VL+L+ + RL F P+L L L
Sbjct: 342 MTNLLKLNLSKNFLGYIDFRTFQNLKGLEVLDLSYNHIWRLGSQSFQG---LPNLLSLNL 398
Query: 369 SGNPL-HV-----LP--------DSTKQYSMRTIPTQIWKNFDFLVILFILNETV-FHEN 413
+GN L HV LP D+ QY + IP I K+ L + F N+ E
Sbjct: 399 TGNSLGHVYTFATLPKLEKLYLGDNNIQY-VYEIPN-IAKHLKTLDLQF--NQIASMSEL 454
Query: 414 YT----YPDLEELRLSGNPLHVLPTGN 436
YT +P +EE+ GN L P N
Sbjct: 455 YTILDEFPQIEEVVFRGNQLLYCPQDN 481
Score = 190 (71.9 bits), Expect = 4.1e-11, P = 4.1e-11
Identities = 127/536 (23%), Positives = 215/536 (40%)
Query: 54 KINPQFFTNLTTLNKLDLS--GNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFD-N 110
+I+ F L+ L L L+ G ++ PL SLE L L+R N+ + P++F N
Sbjct: 114 RIDAGAFNGLSDLKNLTLTQCGLDDSLLSGNFLKPLMSLEMLDLSRNNIRRVQPASFFLN 173
Query: 111 LNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLA 170
+ L+L+ NK+KS + L L GK TL LR S I+ L D N WL
Sbjct: 174 MRRFHVLDLTFNKVKSICEEDL-LNFQGKHFTL-LRLSSIT-LQD---MNEYWL-GWEKC 226
Query: 171 ENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAF--VNATKLRTLYLSGNPLSAA 228
N + + T LDLS +++ F +++TK+++L +S
Sbjct: 227 GNPFKNTSITT-----------LDLSGNGFNVDMAKRFFDAISSTKIQSLIISNTYRIGK 275
Query: 229 DLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESL 288
K K L++ G+ + D+S++ + ++ S L L
Sbjct: 276 SSGDNSKDPDKSTFSGLKSSGI--------------KSFDLSNSSIFSLTYSVFSYLSDL 321
Query: 289 EHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTR 348
E + + S + +I + FL MT+L L LS N L ++ FQNL L VL+L+ + R
Sbjct: 322 EQITLAESQINKIENNAFLGMTNLLKLNLSKNFLGYIDFRTFQNLKGLEVLDLSYNHIWR 381
Query: 349 LNETVFH--EN--------------YTY---PDLEELRLSGNPL---HVLPDSTKQYSMR 386
L F N YT+ P LE+L L N + + +P+ K ++
Sbjct: 382 LGSQSFQGLPNLLSLNLTGNSLGHVYTFATLPKLEKLYLGDNNIQYVYEIPNIAKH--LK 439
Query: 387 TIPTQIWKNFDFLVILFILNETVFHENYTYPDLEELRLSGNPLHVLPTGNXXXXXXXXXX 446
T+ Q + + IL+E +P +EE+ GN L P N
Sbjct: 440 TLDLQFNQIASMSELYTILDE--------FPQIEEVVFRGNQLLYCPQDNHEVLSQNIQV 491
Query: 447 XXXXXX-CKIDYLPP---NVFNNTRNITSLNLANNNL-SMTSELSFQFXXXXXXXXXXXX 501
++ + NVF++ + L+L++N L S+ ++
Sbjct: 492 LDLSFAGLQVIWSEGKCLNVFDDLHQLEVLHLSSNLLQSLPKDIFKDLTSLLILDLSFNS 551
Query: 502 XXXXXTHISPTVLR-----HNR----------AITSIKLVGNPWKCDCNIADMWEW 542
T + P L+ +N ++ + L+ N ++CDC++ D W
Sbjct: 552 LKYLPTDVFPKTLQVLHLDYNSIYSVDPNLFSTLSYLSLMNNDFRCDCDLKDFQTW 607
Score = 171 (65.3 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 109/448 (24%), Positives = 187/448 (41%)
Query: 53 SKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLN 112
S ++ F L +L LDLS N +R ++P F L + +L+ S D LN
Sbjct: 139 SLLSGNFLKPLMSLEMLDLSRNNIRRVQPASFF-LNMRRFHVLDLTFNKVKSICEEDLLN 197
Query: 113 ----HLKTLELSQNKLKSHIDWTL---VLGNLGK---LDTLDLRQSGIS-NLPDNVF--A 159
H L LS L+ ++ L GN K + TLDL +G + ++ F
Sbjct: 198 FQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFNVDMAKRFFDAI 257
Query: 160 NNTWLRNLNLAENELI---------DLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFV 210
++T +++L ++ I D D +T G + S DLSN + L+ F
Sbjct: 258 SSTKIQSLIISNTYRIGKSSGDNSKDPDKSTFSGLKSSGIKSFDLSNSSIFS-LTYSVFS 316
Query: 211 NATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDIS 270
+ L + L+ + ++ + + L +T L +L+L L + TF L+ LD+S
Sbjct: 317 YLSDLEQITLAESQINKIENNAFLG-MTNLLKLNLSKNFLGYIDFRTFQNLKGLEVLDLS 375
Query: 271 HNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLF 330
+N + + L +L L++ ++L + TF + L+ L L N ++ +
Sbjct: 376 YNHIWRLGSQSFQGLPNLLSLNLTGNSLGHVY--TFATLPKLEKLYLGDNNIQYVYE--I 431
Query: 331 QNLT-HLSVLELNNCGLTRLNE--TVFHENYTYPDLEELRLSGNPLHVLPDSTKQYSMRT 387
N+ HL L+L + ++E T+ E +P +EE+ GN L P + +
Sbjct: 432 PNIAKHLKTLDLQFNQIASMSELYTILDE---FPQIEEVVFRGNQLLYCPQDNHEVLSQN 488
Query: 388 IPTQIWKNFDFLVILFILNE--TVFHENYTYPDLEELRLSGNPLHVLPTGNXXXXXXXXX 445
I + +F L +++ + VF + + LE L LS N L LP
Sbjct: 489 IQV-LDLSFAGLQVIWSEGKCLNVFDDLH---QLEVLHLSSNLLQSLPKDIFKDLTSLLI 544
Query: 446 XXXXXXXCKIDYLPPNVFNNTRNITSLN 473
K YLP +VF T + L+
Sbjct: 545 LDLSFNSLK--YLPTDVFPKTLQVLHLD 570
Score = 124 (48.7 bits), Expect = 0.00056, P = 0.00056
Identities = 104/397 (26%), Positives = 166/397 (41%)
Query: 64 TTLNKLDLSGNPLRIIEPGVFDPLTSLEYLML-NRCNLTYISPSAFDNLNHLKTLELSQN 122
T + +DLS N + + F L +LE L+L ++ I ++F L++L +L+L N
Sbjct: 51 TYITNVDLSKNRIAELNETSFSHLEALEVLILMHQTPGLVIRRNSFMRLSNLTSLQLDYN 110
Query: 123 KLKSHIDWTLVLGNLGKLDTLDLRQSGISN--LPDNVFANNTWLRNLNLAENELIDLDVA 180
ID G L L L L Q G+ + L N L L+L+ N + + A
Sbjct: 111 H-HLRIDAGAFNG-LSDLKNLTLTQCGLDDSLLSGNFLKPLMSLEMLDLSRNNIRRVQPA 168
Query: 181 TTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKL 240
+ N+ LDL+ +K ED K TL LS S+ L+ + +
Sbjct: 169 SFF-LNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLR----LS----SITLQDMNE- 218
Query: 241 HRLSLRNCGLSRLPANTFHRFTCLQELDISHNPL-IDAFTALLSPLESLEHLDMGYSNLQ 299
+ L CG N F T + LD+S N +D + S + + SN
Sbjct: 219 YWLGWEKCG------NPFKN-TSITTLDLSGNGFNVDMAKRFFDAISSTKIQSLIISNTY 271
Query: 300 RISRS-----------TF--LKMTSLKTLILSGNKLETLESGLFQNLTHLSVLEL----- 341
RI +S TF LK + +K+ LS + + +L +F L+ L + L
Sbjct: 272 RIGKSSGDNSKDPDKSTFSGLKSSGIKSFDLSNSSIFSLTYSVFSYLSDLEQITLAESQI 331
Query: 342 ----NNC--GLTRLNETVFHENYT-YPDLEELR-LSGNPLHVLPDSTKQYSMRTIPTQIW 393
NN G+T L + +N+ Y D + L G L VL D + + R + +Q +
Sbjct: 332 NKIENNAFLGMTNLLKLNLSKNFLGYIDFRTFQNLKG--LEVL-DLSYNHIWR-LGSQSF 387
Query: 394 KNFDFLVILFILNETVFHENYTY---PDLEELRLSGN 427
+ L+ L + ++ H YT+ P LE+L L N
Sbjct: 388 QGLPNLLSLNLTGNSLGHV-YTFATLPKLEKLYLGDN 423
>SGD|S000003542 [details] [associations]
symbol:CYR1 "Adenylate cyclase" species:4932 "Saccharomyces
cerevisiae" [GO:0005739 "mitochondrion" evidence=IDA] [GO:0000287
"magnesium ion binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006171 "cAMP biosynthetic process" evidence=IEA] [GO:0016829
"lyase activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0004016 "adenylate cyclase activity"
evidence=IEA;IDA;IMP] [GO:0007265 "Ras protein signal transduction"
evidence=IGI] [GO:0007188 "adenylate cyclase-modulating G-protein
coupled receptor signaling pathway" evidence=IGI] [GO:0035556
"intracellular signal transduction" evidence=IEA] [GO:0005789
"endoplasmic reticulum membrane" evidence=IDA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0009190 "cyclic nucleotide
biosynthetic process" evidence=IEA] [GO:0016849 "phosphorus-oxygen
lyase activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IDA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000159
InterPro:IPR001054 InterPro:IPR001932 InterPro:IPR013716
Pfam:PF00211 Pfam:PF00481 Pfam:PF00788 Pfam:PF08509 PROSITE:PS50125
PROSITE:PS50200 PROSITE:PS51450 SMART:SM00044 SMART:SM00314
SMART:SM00332 SMART:SM00789 SGD:S000003542 GO:GO:0005739
GO:GO:0005886 GO:GO:0005524 GO:GO:0007265 EMBL:BK006943
GO:GO:0000287 eggNOG:COG4886 GO:GO:0007188 GO:GO:0004016
Gene3D:3.30.70.1230 SUPFAM:SSF55073 InterPro:IPR025875 Pfam:PF12799
EMBL:X87611 Gene3D:3.60.40.10 SUPFAM:SSF81606 KO:K01768
OrthoDB:EOG41CB4C EMBL:M12057 EMBL:Z49280 EMBL:X03449 PIR:S56776
RefSeq:NP_012529.3 RefSeq:NP_012532.3 ProteinModelPortal:P08678
SMR:P08678 DIP:DIP-2317N IntAct:P08678 MINT:MINT-364060
STRING:P08678 PaxDb:P08678 PeptideAtlas:P08678 EnsemblFungi:YJL005W
GeneID:853452 GeneID:853455 KEGG:sce:YJL002C KEGG:sce:YJL005W
CYGD:YJL005w GeneTree:ENSGT00440000037833 HOGENOM:HOG000112124
KO:K12666 OMA:NANIFLP NextBio:974014 Genevestigator:P08678
GermOnline:YJL005W Uniprot:P08678
Length = 2026
Score = 206 (77.6 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 114/432 (26%), Positives = 193/432 (44%)
Query: 20 ITINLNANPIQPVEGAFLVAR-SLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRI 78
+ ++ NAN P+E F+ + LL L M SK P T L L+L N +R
Sbjct: 821 LDVSNNANIFLPLE--FIESSIKLLSLRMVNIRASKF-PSNITKAYKLVSLELQRNFIRK 877
Query: 79 IEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLG 138
+ P L++L L L +CN P+ F L +L+ L+LS NK + + V+
Sbjct: 878 V-PNSIMKLSNLTILNL-QCNELESLPAGFVELKNLQLLDLSSNKFMHYPE---VINYCT 932
Query: 139 KLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELI---DLDVAT---TLGQNLVHLDS 192
L +DL + I +LP + L +NL+ N+L DL T TL + S
Sbjct: 933 NLLQIDLSYNKIQSLPQST-KYLVKLAKMNLSHNKLNFIGDLSEMTDLRTLNLRYNRISS 991
Query: 193 LDLSNCHLKGP-LSEDAFVN----ATKLRTLYLSGNPLSAADLSVALKPL--TKLHRLSL 245
+ + +L+ L+++ N KLR L + NP++ S++ K + L+L
Sbjct: 992 IKTNASNLQNLFLTDNRISNFEDTLPKLRALEIQENPIT----SISFKDFYPKNMTSLTL 1047
Query: 246 RNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRST 305
LS +P + + L++L+++ N L +S L L L + + L+ I
Sbjct: 1048 NKAQLSSIPGELLTKLSFLEKLELNQNNLT-RLPQEISKLTKLVFLSVARNKLEYIPPE- 1105
Query: 306 FLKMTSLKTLILSGNKLETLESGLFQNLTHLSV-LELNNCGLTRLNETVFHENYTYPDLE 364
++ SL+TL L N + G+ +NL S+ + N G + L + +H N +Y
Sbjct: 1106 LSQLKSLRTLDLHSNNIRDFVDGM-ENLELTSLNISSNAFGNSSLENSFYH-NMSYGS-- 1161
Query: 365 ELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFH-ENYTYPDLE--- 420
+LS + + + + Q+ +W F+ V L +LN + + + ++ LE
Sbjct: 1162 --KLSKSLMFFIA-ADNQFD-----DAMWPLFNCFVNLKVLNLSYNNFSDVSHMKLESIT 1213
Query: 421 ELRLSGNPLHVL 432
EL LSGN L L
Sbjct: 1214 ELYLSGNKLTTL 1225
Score = 174 (66.3 bits), Expect = 6.1e-09, P = 6.1e-09
Identities = 72/266 (27%), Positives = 120/266 (45%)
Query: 17 PGLITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPL 76
P L + + NPI + +++ L + + LS I + T L+ L KL+L+ N L
Sbjct: 1017 PKLRALEIQENPITSISFKDFYPKNMTSLTLNKAQLSSIPGELLTKLSFLEKLELNQNNL 1076
Query: 77 RIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGN 136
+ P LT L +L + R L YI P L L+TL+L N ++ +D + N
Sbjct: 1077 TRL-PQEISKLTKLVFLSVARNKLEYIPPE-LSQLKSLRTLDLHSNNIRDFVDG---MEN 1131
Query: 137 LGKLDTLDLRQS--GISNLPDNVFANNTWLRNLN------LAENELIDLDVATTLGQNLV 188
L +L +L++ + G S+L ++ + N ++ L+ +A + D D L V
Sbjct: 1132 L-ELTSLNISSNAFGNSSLENSFYHNMSYGSKLSKSLMFFIAADNQFD-DAMWPLFNCFV 1189
Query: 189 HLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNC 248
+L L+LS + S+ + + + LYLSGN L+ LK + L L L +
Sbjct: 1190 NLKVLNLSYNNF----SDVSHMKLESITELYLSGNKLTTLSGDTVLK-WSSLKTLMLNSN 1244
Query: 249 GLSRLPANTFHRFTCLQELDISHNPL 274
+ LPA + L D+ N L
Sbjct: 1245 QMLSLPAE-LSNLSQLSVFDVGANQL 1269
Score = 169 (64.5 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 100/364 (27%), Positives = 172/364 (47%)
Query: 19 LITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRI 78
L +NL+ N + + G L L ++ +S I TN + L L L+ N +
Sbjct: 957 LAKMNLSHNKLNFI-GDLSEMTDLRTLNLRYNRISSIK----TNASNLQNLFLTDNRISN 1011
Query: 79 IEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLG 138
E D L L L + +T IS F N + +L L++ +L S I L L L
Sbjct: 1012 FE----DTLPKLRALEIQENPITSISFKDFYPKN-MTSLTLNKAQLSS-IPGEL-LTKLS 1064
Query: 139 KLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNC 198
L+ L+L Q+ ++ LP + + T L L++A N+L + L Q L L +LDL +
Sbjct: 1065 FLEKLELNQNNLTRLPQEI-SKLTKLVFLSVARNKLEY--IPPELSQ-LKSLRTLDLHSN 1120
Query: 199 HLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVA----LKPLTKLHR-LSLRNCGLSRL 253
+++ + D N +L +L +S N + L + + +KL + L ++
Sbjct: 1121 NIRDFV--DGMENL-ELTSLNISSNAFGNSSLENSFYHNMSYGSKLSKSLMFFIAADNQF 1177
Query: 254 PANTFHRFTC---LQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMT 310
+ F C L+ L++S+N D LES+ L + + L +S T LK +
Sbjct: 1178 DDAMWPLFNCFVNLKVLNLSYNNFSDVSHM---KLESITELYLSGNKLTTLSGDTVLKWS 1234
Query: 311 SLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELR--- 367
SLKTL+L+ N++ +L + L NL+ LSV ++ L + N + +H ++ + + +EL+
Sbjct: 1235 SLKTLMLNSNQMLSLPAEL-SNLSQLSVFDVGANQL-KYNISNYHYDWNWRNNKELKYLN 1292
Query: 368 LSGN 371
SGN
Sbjct: 1293 FSGN 1296
Score = 152 (58.6 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 103/397 (25%), Positives = 168/397 (42%)
Query: 19 LITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRI 78
L+++ L N I+ V + + +L L +Q C + P F L L LDLS N +
Sbjct: 865 LVSLELQRNFIRKVPNSIMKLSNLTILNLQ-CNELESLPAGFVELKNLQLLDLSSNKF-M 922
Query: 79 IEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLG 138
P V + T+L + L+ + + P + L L + LS NKL D L +
Sbjct: 923 HYPEVINYCTNLLQIDLSYNKIQSL-PQSTKYLVKLAKMNLSHNKLNFIGD----LSEMT 977
Query: 139 KLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDV------ATTLGQNLV---- 188
L TL+LR + IS++ N A+N L+NL L +N + + + A + +N +
Sbjct: 978 DLRTLNLRYNRISSIKTN--ASN--LQNLFLTDNRISNFEDTLPKLRALEIQENPITSIS 1033
Query: 189 -------HLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLH 241
++ SL L+ L + + + L L L+ N L+ L + LTKL
Sbjct: 1034 FKDFYPKNMTSLTLNKAQLSS-IPGELLTKLSFLEKLELNQNNLTR--LPQEISKLTKLV 1090
Query: 242 RLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLS-PLESLEHLDMGYSNLQR 300
LS+ L +P + L+ LD+ N + D + + L SL + N
Sbjct: 1091 FLSVARNKLEYIPPE-LSQLKSLRTLDLHSNNIRDFVDGMENLELTSLNISSNAFGN-SS 1148
Query: 301 ISRSTFLKMT-------SLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETV 353
+ S + M+ SL I + N+ + LF +L VL L+ + ++
Sbjct: 1149 LENSFYHNMSYGSKLSKSLMFFIAADNQFDDAMWPLFNCFVNLKVLNLSYNNFSDVSHMK 1208
Query: 354 FHENYTYPDLEELRLSGNPLHVLPDST--KQYSMRTI 388
E+ T EL LSGN L L T K S++T+
Sbjct: 1209 L-ESIT-----ELYLSGNKLTTLSGDTVLKWSSLKTL 1239
>MGI|MGI:2442509 [details] [associations]
symbol:Slitrk4 "SLIT and NTRK-like family, member 4"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0007409 "axonogenesis" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=ISS] InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:2442509
GO:GO:0016021 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007409 InterPro:IPR000372
SMART:SM00013 HOGENOM:HOG000290667 HOVERGEN:HBG056407
GeneTree:ENSGT00680000099775 CTD:139065 OrthoDB:EOG4VHK5S
EMBL:AB097573 EMBL:AK032263 EMBL:AK039763 EMBL:AK053065
IPI:IPI00396668 RefSeq:NP_848855.2 UniGene:Mm.101707
ProteinModelPortal:Q810B8 SMR:Q810B8 PhosphoSite:Q810B8
PaxDb:Q810B8 PRIDE:Q810B8 Ensembl:ENSMUST00000069926
Ensembl:ENSMUST00000114679 GeneID:245446 KEGG:mmu:245446
InParanoid:Q810B8 ChiTaRS:SLITRK4 NextBio:386707 Bgee:Q810B8
CleanEx:MM_SLITRK4 Genevestigator:Q810B8
GermOnline:ENSMUSG00000046699 Uniprot:Q810B8
Length = 837
Score = 131 (51.2 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 41/134 (30%), Positives = 68/134 (50%)
Query: 22 INLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIE 80
+++N N I+ V+ F L L++ ++ I + F NLT L +L L+GN + +
Sbjct: 382 LHVNGNNIKDVDISDFTEFEGLDLLHLGSNQITLIKGEVFHNLTNLRRLYLNGNQIERLY 441
Query: 81 PGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKL 140
P +F L +L+YL L + I FD++ +L+ L L+ N LKS + + G L
Sbjct: 442 PEIFSGLHNLQYLYLEYNLIKEILAGTFDSMPNLQLLYLNNNLLKS-LPVYIFSG--APL 498
Query: 141 DTLDLRQSGISNLP 154
L+LR + LP
Sbjct: 499 ARLNLRNNKFMYLP 512
Score = 128 (50.1 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 49/189 (25%), Positives = 84/189 (44%)
Query: 189 HLDSLDLS-NCHLKGPLSEDAFV-NATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLR 246
H L LS NC K S + L+++GN + D+S T+ L L
Sbjct: 351 HPSDLGLSVNCQEKNIQSMSELTPKPLNAKKLHVNGNNIKDVDIS----DFTEFEGLDLL 406
Query: 247 NCG---LSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISR 303
+ G ++ + FH T L+ L ++ N + + + S L +L++L + Y+ ++ I
Sbjct: 407 HLGSNQITLIKGEVFHNLTNLRRLYLNGNQIERLYPEIFSGLHNLQYLYLEYNLIKEILA 466
Query: 304 STFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDL 363
TF M +L+ L L+ N L++L +F L+ L L N L + + L
Sbjct: 467 GTFDSMPNLQLLYLNNNLLKSLPVYIFSGAP-LARLNLRNNKFMYLPVSGVLDQLQ--SL 523
Query: 364 EELRLSGNP 372
++ L GNP
Sbjct: 524 TQIDLEGNP 532
Score = 128 (50.1 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 42/160 (26%), Positives = 75/160 (46%)
Query: 218 LYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDA 277
LY++ +S + P + + L+ +N L+ L NTF F+ L + +N L +
Sbjct: 39 LYVNCEKVSVYRPNQLKPPWSNFYHLNFQNNFLNILYPNTFVNFSHAVSLHLGNNKLQNI 98
Query: 278 FTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLS 337
L +L+ L + + L+ + TFL + +L+ L N ++ +E G F L L
Sbjct: 99 EGGAFLGLSALKQLHLNNNELKILRADTFLGIENLEYLQADYNLIKYIERGAFNKLHKLK 158
Query: 338 VLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLP 377
VL LN+ ++ L + +F + L L + GN + LP
Sbjct: 159 VLILNDNLISFLPDNIFR----FASLTHLDIRGNRIQKLP 194
Score = 125 (49.1 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 41/131 (31%), Positives = 64/131 (48%)
Query: 44 YLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYI 103
+L Q L+ + P F N + L L N L+ IE G F L++L+ L LN L +
Sbjct: 63 HLNFQNNFLNILYPNTFVNFSHAVSLHLGNNKLQNIEGGAFLGLSALKQLHLNNNELKIL 122
Query: 104 SPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTW 163
F + +L+ L+ N +K +I+ L KL L L + IS LPDN+F +
Sbjct: 123 RADTFLGIENLEYLQADYNLIK-YIERG-AFNKLHKLKVLILNDNLISFLPDNIFRFAS- 179
Query: 164 LRNLNLAENEL 174
L +L++ N +
Sbjct: 180 LTHLDIRGNRI 190
Score = 123 (48.4 bits), Expect = 3.8e-12, Sum P(2) = 3.8e-12
Identities = 39/149 (26%), Positives = 70/149 (46%)
Query: 20 ITINLNANPIQPVEG-AFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRI 78
++++L N +Q +EG AFL +L L++ L + F + L L N ++
Sbjct: 86 VSLHLGNNKLQNIEGGAFLGLSALKQLHLNNNELKILRADTFLGIENLEYLQADYNLIKY 145
Query: 79 IEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLG 138
IE G F+ L L+ L+LN NL P L L++ N+++ + + VL ++G
Sbjct: 146 IERGAFNKLHKLKVLILND-NLISFLPDNIFRFASLTHLDIRGNRIQK-LPYIGVLEHIG 203
Query: 139 KLDTLDLRQSGISNLPDNVFANNTWLRNL 167
++ L L + N ++ WL N+
Sbjct: 204 RVVELQLEDNPW-NCSCDLLPLKAWLENM 231
Score = 83 (34.3 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 48/191 (25%), Positives = 78/191 (40%)
Query: 368 LSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVI----LFILNETVFHENYTYPDLEELR 423
L+ LHV ++ K + T+ ++ D L + + ++ VFH N T +L L
Sbjct: 377 LNAKKLHVNGNNIKDVDISDF-TE-FEGLDLLHLGSNQITLIKGEVFH-NLT--NLRRLY 431
Query: 424 LSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLANNNLSMTS 483
L+GN + L K + L F++ N+ L L NNNL + S
Sbjct: 432 LNGNQIERLYPEIFSGLHNLQYLYLEYNLIK-EILA-GTFDSMPNLQLLYL-NNNL-LKS 487
Query: 484 ELSFQFXXXXXXXXXXXXXXXXXTHISPTVLRHNRAITSIKLVGNPWKCDCNIADMWEWA 543
+ F +S VL +++T I L GNPW C C++ + W
Sbjct: 488 LPVYIFSGAPLARLNLRNNKFMYLPVSG-VLDQLQSLTQIDLEGNPWDCTCDLVALKLWL 546
Query: 544 TREKGDIGVLV 554
EK + G++V
Sbjct: 547 --EKLNDGIVV 555
>UNIPROTKB|Q7Z5L7 [details] [associations]
symbol:PODN "Podocan" species:9606 "Homo sapiens"
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
[GO:0030336 "negative regulation of cell migration" evidence=IDA]
[GO:0005615 "extracellular space" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005518 "collagen binding"
evidence=IDA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IDA] InterPro:IPR001611 PROSITE:PS51450
GO:GO:0005737 GO:GO:0008285 GO:GO:0005615 GO:GO:0005578
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0030336
GO:GO:0005518 InterPro:IPR000372 SMART:SM00013 EMBL:AL445183
HSSP:P07359 EMBL:AY313607 EMBL:AY358294 EMBL:AK296649 EMBL:AK299375
EMBL:AK304599 EMBL:BC028292 EMBL:BC030608 IPI:IPI00419440
IPI:IPI00645660 IPI:IPI00908607 IPI:IPI00941131
RefSeq:NP_001186009.1 RefSeq:NP_001186010.1 RefSeq:NP_001186011.1
RefSeq:NP_714914.2 UniGene:Hs.586141 UniGene:Hs.740631
ProteinModelPortal:Q7Z5L7 SMR:Q7Z5L7 STRING:Q7Z5L7
PhosphoSite:Q7Z5L7 DMDM:118573110 PRIDE:Q7Z5L7 DNASU:127435
Ensembl:ENST00000312553 Ensembl:ENST00000371500
Ensembl:ENST00000395871 GeneID:127435 KEGG:hsa:127435
UCSC:uc001cuv.3 UCSC:uc001cuw.3 UCSC:uc010ons.2 CTD:127435
GeneCards:GC01P053527 H-InvDB:HIX0199924 HGNC:HGNC:23174
HPA:HPA013892 MIM:608661 neXtProt:NX_Q7Z5L7 PharmGKB:PA134980106
HOVERGEN:HBG059195 InParanoid:Q7Z5L7 OMA:SGNRLHT OrthoDB:EOG42V8FX
ChiTaRS:PODN GenomeRNAi:127435 NextBio:82095 Bgee:Q7Z5L7
CleanEx:HS_PODN Genevestigator:Q7Z5L7 GermOnline:ENSG00000174348
Uniprot:Q7Z5L7
Length = 613
Score = 199 (75.1 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 104/356 (29%), Positives = 157/356 (44%)
Query: 17 PGLITINLNANPIQPVE-GAFLVARSLLYLYMQECTLSK--INPQFFTNLTTLNKLDLSG 73
P L ++L N ++ + GAF SL LY+Q L+ ++ + F L++L LDLS
Sbjct: 238 PALYKLHLKNNKLEKIPPGAFSELSSLRELYLQNNYLTDEGLDNETFWKLSSLEYLDLSS 297
Query: 74 NPL---------------------RIIEPGVFDPLTSLEYLML--NRCNLTYISPSAFDN 110
N L R ++ V P+ SLEYL+L N+ I P AF
Sbjct: 298 NNLSRVPAGLPRSLVLLHLEKNAIRSVDANVLTPIRSLEYLLLHSNQLREQGIHPLAFQG 357
Query: 111 LNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLA 170
L L T+ L N L+ + G ++ TL + + I+ + FA +L LNL+
Sbjct: 358 LKRLHTVHLYNNALER-----VPSGLPRRVRTLMILHNQITGIGREDFATTYFLEELNLS 412
Query: 171 ENELIDLDVATTLGQNLVHLDSLDLSNCHLKG-PLSEDAFVNATKLRTLYLSGNPLSAAD 229
N + V + L L SLDLS L P V+ K++ N L+A
Sbjct: 413 YNRITSPQVHRDAFRKLRLLRSLDLSGNRLHTLPPGLPRNVHVLKVKR-----NELAALA 467
Query: 230 LSVALKPLTKLHRLSLRNCGL-SR-LPANTFHRFTCLQELDISHNPLIDAFTALLSPLES 287
AL + +L L L + L SR L + LQ LDI+ N L + L P ES
Sbjct: 468 RG-ALVGMAQLRELYLTSNRLRSRALGPRAWVDLAHLQLLDIAGNQLTEIPEGL--P-ES 523
Query: 288 LEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLE--TLESGLFQNLTHLSVLEL 341
LE+L + + + + + F +LK + L NKL ++ F+ L HL VL++
Sbjct: 524 LEYLYLQNNKISAVPANAFDSTPNLKGIFLRFNKLAVGSVVDSAFRRLKHLQVLDI 579
Score = 188 (71.2 bits), Expect = 3.8e-11, P = 3.8e-11
Identities = 107/390 (27%), Positives = 163/390 (41%)
Query: 69 LDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHI 128
+D G LR PG T+ +L L L I P L+ L+TL L N+L S
Sbjct: 80 VDCGGIDLREF-PGDLPEHTN--HLSLQNNQLEKIYPEELSRLHRLETLNLQNNRLTSRG 136
Query: 129 DWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLV 188
+L L+ L L + ++ P F N L +++ A N L + T GQ
Sbjct: 137 LPEKAFEHLTNLNYLYLANNKLTLAPR--FLPNA-LISVDFAANYLTKI-YGLTFGQK-P 191
Query: 189 HLDSLDLSNCHLKGP-LSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRN 247
+L S+ L N L L ++ F ++ + L LS N L + L P L++L L+N
Sbjct: 192 NLRSVYLHNNKLADAGLPDNMFNGSSNVEVLILSSNFLR--HVPKHLPPA--LYKLHLKN 247
Query: 248 CGLSRLPANTFHRFTCLQELDISHNPLIDAF--TALLSPLESLEHLDMGYSNLQRISRST 305
L ++P F + L+EL + +N L D L SLE+LD+ +NL R+
Sbjct: 248 NKLEKIPPGAFSELSSLRELYLQNNYLTDEGLDNETFWKLSSLEYLDLSSNNLSRVPAGL 307
Query: 306 FLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEE 365
SL L L N + ++++ + + L L L++ +L E H + L+
Sbjct: 308 ---PRSLVLLHLEKNAIRSVDANVLTPIRSLEYLLLHS---NQLREQGIHP-LAFQGLKR 360
Query: 366 LR---LSGNPLHVLPDSTKQYSMRTIP------TQIWKNFDFLVILFILNETVFHENYTY 416
L L N L +P + +RT+ T I + DF F+ + + T
Sbjct: 361 LHTVHLYNNALERVPSGLPR-RVRTLMILHNQITGIGRE-DFATTYFLEELNLSYNRITS 418
Query: 417 PD-----------LEELRLSGNPLHVLPTG 435
P L L LSGN LH LP G
Sbjct: 419 PQVHRDAFRKLRLLRSLDLSGNRLHTLPPG 448
Score = 153 (58.9 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 113/425 (26%), Positives = 185/425 (43%)
Query: 33 EGAFLVARSLLYLYMQECTLSKINPQFFTN-LTTLNKLDLSGNPLRIIEPGVFDPLTSLE 91
E AF +L YLY+ L+ + P+F N L +++ + + G L S+
Sbjct: 139 EKAFEHLTNLNYLYLANNKLT-LAPRFLPNALISVDFAANYLTKIYGLTFGQKPNLRSV- 196
Query: 92 YLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLK---SHID---WTLVLGNLGKLDTLDL 145
YL N+ + + F+ ++++ L LS N L+ H+ + L L N KL+ +
Sbjct: 197 YLHNNKLADAGLPDNMFNGSSNVEVLILSSNFLRHVPKHLPPALYKLHLKN-NKLEKIPP 255
Query: 146 RQ-SGISNLPDNVFANNTWLRNLNLAENE----LIDLDVATTLGQNLVHLDS---LDLSN 197
S +S+L + ++ N +L + L +NE L L+ NL + + L
Sbjct: 256 GAFSELSSLRE-LYLQNNYLTDEGL-DNETFWKLSSLEYLDLSSNNLSRVPAGLPRSLVL 313
Query: 198 CHL-KGPL-SEDAFVNATKLRTL-YL--SGNPLSAADLS-VALKPLTKLHRLSLRNCGLS 251
HL K + S DA V T +R+L YL N L + +A + L +LH + L N L
Sbjct: 314 LHLEKNAIRSVDANV-LTPIRSLEYLLLHSNQLREQGIHPLAFQGLKRLHTVHLYNNALE 372
Query: 252 RLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQ--RISRSTFLKM 309
R+P+ R ++ L I HN + + LE L++ Y+ + ++ R F K+
Sbjct: 373 RVPSGLPRR---VRTLMILHNQITGIGREDFATTYFLEELNLSYNRITSPQVHRDAFRKL 429
Query: 310 TSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLS 369
L++L LSGN+L TL GL +N+ H VL++ L L L EL L+
Sbjct: 430 RLLRSLDLSGNRLHTLPPGLPRNV-H--VLKVKRNELAALARGAL---VGMAQLRELYLT 483
Query: 370 GNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTYPD-LEELRLSGNP 428
N L R + + W + L +L I + P+ LE L L N
Sbjct: 484 SNRLR----------SRALGPRAWVDLAHLQLLDIAGNQLTEIPEGLPESLEYLYLQNNK 533
Query: 429 LHVLP 433
+ +P
Sbjct: 534 ISAVP 538
>ZFIN|ZDB-GENE-070912-344 [details] [associations]
symbol:si:dkey-100n23.2 "si:dkey-100n23.2"
species:7955 "Danio rerio" [GO:0007165 "signal transduction"
evidence=IEA] InterPro:IPR000157 InterPro:IPR001611 Pfam:PF01582
PROSITE:PS50104 PROSITE:PS51450 SMART:SM00255
ZFIN:ZDB-GENE-070912-344 GO:GO:0016021 InterPro:IPR003591
SMART:SM00369 GO:GO:0045087 GO:GO:0005622 GO:GO:0004888
SUPFAM:SSF52200 GeneTree:ENSGT00680000099674 EMBL:BX936337
IPI:IPI00635635 Ensembl:ENSDART00000101409 Uniprot:F1Q8A7
Length = 737
Score = 200 (75.5 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 89/313 (28%), Positives = 146/313 (46%)
Query: 19 LITINLNANPIQPVEG-AFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLR 77
LI + L N I +E AF+ L LY+ LS I+ F+ L L LDL GN +
Sbjct: 180 LIILELFNNQIYNIEDFAFVGLNKLEELYLSGNKLSYIHQHTFSGLHELMVLDLQGNHII 239
Query: 78 IIEPGVFDPLTSLEYLMLNRCN-LTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGN 136
IEP F ++ L+L N L+ + P+ F+ + L+ L L LK+ D+ V
Sbjct: 240 YIEPKSFGHFMNITTLLLGDLNFLSLLKPNVFEKIPQLQNLSLINVCLKNIEDFAFV--G 297
Query: 137 LGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNL----VHLDS 192
L KL+ L L + +S + + F+ L L+L N +I ++ + G + L
Sbjct: 298 LNKLEELYLCDNKLSYIHQHTFSGLHELTVLDLQGNHIIYIE-PKSFGYMKCLPDMSLIK 356
Query: 193 LDLSNCHLKGPLSEDAFVNATKLRTLYL---SGNPLSAADLSVALKPLTKLHRLSLRNCG 249
++LS+ P + ++ LR ++L S L+ DL+V + L L L+L N
Sbjct: 357 VNLSDIFYGIPCNLSNLFLSSGLRPMHLVIGSNTTLNIGDLAV-INQLVHLKTLTLGNID 415
Query: 250 LSRLP--ANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFL 307
L+ P A FH T LQ L +++ + +L L +L L + +N I + TF+
Sbjct: 416 LTNQPNLAIMFHNLTKLQTLILANCRIFFLDGSLTKDLTALRKLILIPTNTVNILQ-TFV 474
Query: 308 K-MTSLKTLILSG 319
+ +T L+ + G
Sbjct: 475 EHLTDLEYVYFEG 487
Score = 155 (59.6 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 92/327 (28%), Positives = 143/327 (43%)
Query: 60 FTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLEL 119
FT T L L+L N + IE F L LE L L+ L+YI F L+ L L+L
Sbjct: 174 FTCFTNLIILELFNNQIYNIEDFAFVGLNKLEELYLSGNKLSYIHQHTFSGLHELMVLDL 233
Query: 120 SQNKLKSHIDWTLVLGNLGKLDTLDLRQSG-ISNLPDNVFANNTWLRNLNLAENELIDLD 178
N + +I+ G+ + TL L +S L NVF L+NL+L L +++
Sbjct: 234 QGNHI-IYIE-PKSFGHFMNITTLLLGDLNFLSLLKPNVFEKIPQLQNLSLINVCLKNIE 291
Query: 179 VATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLT 238
+G N L+ L L + L + + F +L L L GN + + + +
Sbjct: 292 DFAFVGLN--KLEELYLCDNKLSY-IHQHTFSGLHELTVLDLQGNHIIYIEPK-SFGYMK 347
Query: 239 KLHRLSLRNCGLSRL----PANTFHRFTCL----QELDISHNPLID-AFTALLSPLESLE 289
L +SL LS + P N + F L I N ++ A+++ L L+
Sbjct: 348 CLPDMSLIKVNLSDIFYGIPCNLSNLFLSSGLRPMHLVIGSNTTLNIGDLAVINQLVHLK 407
Query: 290 HLDMGYSNL--QRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLT 347
L +G +L Q F +T L+TLIL+ ++ L+ L ++LT L L L
Sbjct: 408 TLTLGNIDLTNQPNLAIMFHNLTKLQTLILANCRIFFLDGSLTKDLTALRKLILIPTNTV 467
Query: 348 RLNETVFHENYTYPDLEELRLSGNPLH 374
+ +T F E+ T DLE + G L+
Sbjct: 468 NILQT-FVEHLT--DLEYVYFEGLGLY 491
Score = 131 (51.2 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 82/325 (25%), Positives = 129/325 (39%)
Query: 36 FLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLML 95
F +L+ L + + I F L L +L LSGN L I F L L L L
Sbjct: 174 FTCFTNLIILELFNNQIYNIEDFAFVGLNKLEELYLSGNKLSYIHQHTFSGLHELMVLDL 233
Query: 96 NRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPD 155
++ YI P +F + ++ TL L S + V + +L L L + N+ D
Sbjct: 234 QGNHIIYIEPKSFGHFMNITTLLLGDLNFLSLLKPN-VFEKIPQLQNLSLINVCLKNIED 292
Query: 156 NVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLK--GPLS-------E 206
F L L L +N+L + T G L L LDL H+ P S
Sbjct: 293 FAFVGLNKLEELYLCDNKLSYIHQHTFSG--LHELTVLDLQGNHIIYIEPKSFGYMKCLP 350
Query: 207 DAFVNATKLRTLYLSGNP--LSAADLSVALKPL-TKLHRLSLRNCGLSRLPANTFHRFTC 263
D + L ++ G P LS LS L+P+ + + N G + H T
Sbjct: 351 DMSLIKVNLSDIFY-GIPCNLSNLFLSSGLRPMHLVIGSNTTLNIGDLAVINQLVHLKTL 409
Query: 264 -LQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLIL-SGNK 321
L +D+++ P + + L L+ L + + + S +T+L+ LIL N
Sbjct: 410 TLGNIDLTNQPNL---AIMFHNLTKLQTLILANCRIFFLDGSLTKDLTALRKLILIPTNT 466
Query: 322 LETLESGLFQNLTHLSVLELNNCGL 346
+ L++ ++LT L + GL
Sbjct: 467 VNILQT-FVEHLTDLEYVYFEGLGL 490
>UNIPROTKB|F1SHH6 [details] [associations]
symbol:LRRC4C "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050770 "regulation of axonogenesis" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 InterPro:IPR026878
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 CTD:57689 KO:K07523 OMA:WITPNGS
PANTHER:PTHR24369:SF8 EMBL:CU607014 RefSeq:XP_003122907.1
ProteinModelPortal:F1SHH6 Ensembl:ENSSSCT00000014510
GeneID:100522726 KEGG:ssc:100522726 Uniprot:F1SHH6
Length = 640
Score = 199 (75.1 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 71/233 (30%), Positives = 113/233 (48%)
Query: 64 TTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNK 123
T L+L N ++II+ F L LE L L+R ++ I AF+ L +L TLEL N+
Sbjct: 76 TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNR 135
Query: 124 LKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTL 183
L + + V L KL L LR + I ++P F LR L+L E + + ++
Sbjct: 136 LTTIPNGAFVY--LSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSY-ISEGA 192
Query: 184 GQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRL 243
+ L +L L+L+ C+L+ + V KL L LSGN LSA + + L L +L
Sbjct: 193 FEGLSNLRYLNLAMCNLREIPNLTPLV---KLDELDLSGNHLSAIRPG-SFQGLMHLQKL 248
Query: 244 SLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYS 296
+ + + N F L E++++HN L L +PL LE + + ++
Sbjct: 249 WMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHN 301
Score = 194 (73.4 bits), Expect = 9.2e-12, P = 9.2e-12
Identities = 72/233 (30%), Positives = 113/233 (48%)
Query: 42 LLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLT 101
LL L+ + + K+N F +L L L LS N +R IE G F+ L +L L L LT
Sbjct: 80 LLNLHENQIQIIKVNS--FKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLT 137
Query: 102 YISPSAFDNLNHLKTLELSQNKLKSHIDWTLV-LGNLGKLDTLDLRQSGISNLPDNVFAN 160
I AF L+ LK L L N ++S + + +L +LD +L++ +S + + F
Sbjct: 138 TIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKR--LSYISEGAFEG 195
Query: 161 NTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYL 220
+ LR LNLA L ++ T L V LD LDLS HL + +F L+ L++
Sbjct: 196 LSNLRYLNLAMCNLREIPNLTPL----VKLDELDLSGNHLSA-IRPGSFQGLMHLQKLWM 250
Query: 221 SGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNP 273
+ + + + A L L ++L + L+ LP + F L+ + + HNP
Sbjct: 251 IQSQIQVIERN-AFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNP 302
Score = 170 (64.9 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 79/315 (25%), Positives = 137/315 (43%)
Query: 66 LNKLDLSGNPLRI---IEPGVFDPLT----SLEYLMLNRCNLTYISPSAFDNLNHLKTLE 118
LNK+ L + I +FDPL +L+ L++ PS N +
Sbjct: 2 LNKMTLHPQQIMIGPRFNRALFDPLLVVLLALQLLVVAGLVRAQTCPSVCSCSNQFSKVI 61
Query: 119 LSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLD 178
+ L+ D G L+L ++ I + N F + L L L+ N + ++
Sbjct: 62 CVRKNLREVPD-----GISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIE 116
Query: 179 VATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLT 238
+ G L +L++L+L + L + AFV +KL+ L+L NP+ + S A +
Sbjct: 117 IGAFNG--LANLNTLELFDNRLT-TIPNGAFVYLSKLKELWLRNNPIESIP-SYAFNRIP 172
Query: 239 KLHRLSLRNCG-LSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSN 297
L RL L LS + F + L+ L+++ L + L+PL L+ LD+ ++
Sbjct: 173 SLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPN--LTPLVKLDELDLSGNH 230
Query: 298 LQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHEN 357
L I +F + L+ L + ++++ +E F NL L + L + LT L +F
Sbjct: 231 LSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPL 290
Query: 358 YTYPDLEELRLSGNP 372
+ LE + L NP
Sbjct: 291 H---HLERIHLHHNP 302
Score = 145 (56.1 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 38/92 (41%), Positives = 50/92 (54%)
Query: 33 EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEY 92
EGAF +L YL + C L +I P T L L++LDLSGN L I PG F L L+
Sbjct: 190 EGAFEGLSNLRYLNLAMCNLREI-PNL-TPLVKLDELDLSGNHLSAIRPGSFQGLMHLQK 247
Query: 93 LMLNRCNLTYISPSAFDNLNHLKTLELSQNKL 124
L + + + I +AFDNL L + L+ N L
Sbjct: 248 LWMIQSQIQVIERNAFDNLQSLVEINLAHNNL 279
Score = 134 (52.2 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 58/207 (28%), Positives = 96/207 (46%)
Query: 291 LDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLN 350
L++ + +Q I ++F + L+ L LS N + T+E G F L +L+ LEL + LT
Sbjct: 81 LNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLT--- 137
Query: 351 ETVFHENYTY-PDLEELRLSGNPLHVLPDST--KQYSMRTIPTQIWKN--------FDFL 399
T+ + + Y L+EL L NP+ +P + S+R + K F+ L
Sbjct: 138 -TIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGL 196
Query: 400 VILFILNETVFH----ENYT-YPDLEELRLSGNPLHVLPTGNXXXXXXXXXXXXXXXXCK 454
L LN + + N T L+EL LSGN L + G+ +
Sbjct: 197 SNLRYLNLAMCNLREIPNLTPLVKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQS--Q 254
Query: 455 IDYLPPNVFNNTRNITSLNLANNNLSM 481
I + N F+N +++ +NLA+NNL++
Sbjct: 255 IQVIERNAFDNLQSLVEINLAHNNLTL 281
>TAIR|locus:2046357 [details] [associations]
symbol:RLP23 "receptor like protein 23" species:3702
"Arabidopsis thaliana" [GO:0005576 "extracellular region"
evidence=ISM] [GO:0006952 "defense response" evidence=ISS]
[GO:0016301 "kinase activity" evidence=ISS] [GO:0007165 "signal
transduction" evidence=IC] [GO:0000165 "MAPK cascade" evidence=RCA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0006612 "protein targeting to membrane"
evidence=RCA] [GO:0009617 "response to bacterium" evidence=RCA]
[GO:0009627 "systemic acquired resistance" evidence=RCA]
[GO:0009862 "systemic acquired resistance, salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=RCA] [GO:0010310 "regulation
of hydrogen peroxide metabolic process" evidence=RCA] [GO:0010363
"regulation of plant-type hypersensitive response" evidence=RCA]
[GO:0031348 "negative regulation of defense response" evidence=RCA]
[GO:0034976 "response to endoplasmic reticulum stress"
evidence=RCA] [GO:0035304 "regulation of protein dephosphorylation"
evidence=RCA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
EMBL:CP002685 GenomeReviews:CT485783_GR eggNOG:COG4886
EMBL:AC003974 HOGENOM:HOG000116562 UniGene:At.66389 IPI:IPI00539943
PIR:T00800 RefSeq:NP_180827.1 ProteinModelPortal:O48849 SMR:O48849
STRING:O48849 PRIDE:O48849 EnsemblPlants:AT2G32680.1 GeneID:817828
KEGG:ath:AT2G32680 TAIR:At2g32680 InParanoid:O48849
PhylomeDB:O48849 ProtClustDB:CLSN2683406 ArrayExpress:O48849
Genevestigator:O48849 Uniprot:O48849
Length = 890
Score = 201 (75.8 bits), Expect = 2.7e-12, P = 2.7e-12
Identities = 91/312 (29%), Positives = 139/312 (44%)
Query: 19 LITINLNAN----PIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGN 74
LI ++L+ N + P F + L YL + S P F NL L L LS N
Sbjct: 172 LIVLDLSYNHFSGTLNPNSSLFEL-HQLRYLNLAFNNFSSSLPSKFGNLHRLENLILSSN 230
Query: 75 PLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVL 134
P LT L L L++ LT P NL +L L+LS NK I +L+
Sbjct: 231 GFSGQVPSTISNLTRLTKLYLDQNKLTSSFPLV-QNLTNLYELDLSYNKFFGVIPSSLL- 288
Query: 135 GNLGKLDTLDLRQSGISNLPD-NVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSL 193
L L L LR++ ++ + + + ++ L + L N + + + + L++L L
Sbjct: 289 -TLPFLAHLALRENNLAGSVEVSNSSTSSRLEIMYLGSNHF-EGQILEPISK-LINLKHL 345
Query: 194 DLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSV-ALKPLTKLHRLSLRNCGLSR 252
DLS + P+ F + LR+L LSGN +S+A LS + PLT L L+LR+C ++
Sbjct: 346 DLSFLNTSYPIDLKLFSSLKSLRSLDLSGNSISSASLSSDSYIPLT-LEMLTLRHCDINE 404
Query: 253 LPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRST-FLKMTS 311
P N L +DIS+N + L L L+ + +G + S L +S
Sbjct: 405 FP-NILKTLKELVYIDISNNRMKGKIPEWLWSLPLLQSVTLGNNYFTGFQGSAEILVNSS 463
Query: 312 LKTLILSGNKLE 323
+ L L N E
Sbjct: 464 VLLLYLDSNNFE 475
Score = 187 (70.9 bits), Expect = 8.7e-11, P = 8.7e-11
Identities = 104/347 (29%), Positives = 154/347 (44%)
Query: 45 LYMQEC---TLSKINPQFFTNLTTLNKLDLSGNPLRIIE-PGVFDPLTSLEYLMLNRCNL 100
L +++C TL K N F L +DL N L P F L LE L L+
Sbjct: 78 LQLRKCLSGTL-KSNSSLF-GFHQLRYVDLQNNNLTSSSLPSGFGNLKRLEGLFLSSNGF 135
Query: 101 TYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQ---SGISNLPDNV 157
PS+F NL L L+LS NKL + LV G L KL LDL SG N ++
Sbjct: 136 LGQVPSSFSNLTMLAQLDLSYNKLTG--SFPLVRG-LRKLIVLDLSYNHFSGTLNPNSSL 192
Query: 158 FANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRT 217
F + LR LNLA N + + G NL L++L LS+ G + N T+L
Sbjct: 193 FELHQ-LRYLNLAFNNFSS-SLPSKFG-NLHRLENLILSSNGFSGQVPS-TISNLTRLTK 248
Query: 218 LYLSGNPLSAADLSVALKPLTKLHRLSLR-NCGLSRLPANTFHRFTCLQELDISHNPLID 276
LYL N L+++ V + LT L+ L L N +P++ L L + N L
Sbjct: 249 LYLDQNKLTSSFPLV--QNLTNLYELDLSYNKFFGVIPSSLL-TLPFLAHLALRENNLAG 305
Query: 277 AFTALLSPLES-LEHLDMGYSNLQRISRSTFLKMTSLKTLILSG-NKLETLESGLFQNLT 334
+ S S LE + +G ++ + K+ +LK L LS N ++ LF +L
Sbjct: 306 SVEVSNSSTSSRLEIMYLGSNHFEGQILEPISKLINLKHLDLSFLNTSYPIDLKLFSSLK 365
Query: 335 HLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTK 381
L L+L+ ++ + ++ ++Y LE L L ++ P+ K
Sbjct: 366 SLRSLDLSGNSIS--SASLSSDSYIPLTLEMLTLRHCDINEFPNILK 410
Score = 132 (51.5 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 91/363 (25%), Positives = 145/363 (39%)
Query: 138 GKLDTLDLRQ--SGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDL 195
G + L LR+ SG ++F + LR ++L N L + + G NL L+ L L
Sbjct: 73 GAVAVLQLRKCLSGTLKSNSSLFGFHQ-LRYVDLQNNNLTSSSLPSGFG-NLKRLEGLFL 130
Query: 196 SNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAA-DLSVALKPLTKLHRLSLRNCGLSRLP 254
S+ G + +F N T L L LS N L+ + L L+ L L LS + + P
Sbjct: 131 SSNGFLGQVPS-SFSNLTMLAQLDLSYNKLTGSFPLVRGLRKLIVLD-LSYNHFSGTLNP 188
Query: 255 ANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKT 314
++ L+ L+++ N + + L LE+L + + ST +T L
Sbjct: 189 NSSLFELHQLRYLNLAFNNFSSSLPSKFGNLHRLENLILSSNGFSGQVPSTISNLTRLTK 248
Query: 315 LILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPL- 373
L L NKL T L QNLT+L L+L+ + + T P L L L N L
Sbjct: 249 LYLDQNKL-TSSFPLVQNLTNLYELDLS---YNKFFGVIPSSLLTLPFLAHLALRENNLA 304
Query: 374 ---HVLPDSTKQ-----Y-SMRTIPTQIWKNFDFLVILFILNETVFHENYT-----YPDL 419
V ST Y QI + L+ L L+ + + +Y + L
Sbjct: 305 GSVEVSNSSTSSRLEIMYLGSNHFEGQILEPISKLINLKHLDLSFLNTSYPIDLKLFSSL 364
Query: 420 EELR---LSGNPLHVLPTGNXXXXXXXXXXXXXXXXCKIDYLPPNVFNNTRNITSLNLAN 476
+ LR LSGN + + C I+ P N+ + + ++++N
Sbjct: 365 KSLRSLDLSGNSISSASLSSDSYIPLTLEMLTLRH-CDINEFP-NILKTLKELVYIDISN 422
Query: 477 NNL 479
N +
Sbjct: 423 NRM 425
Score = 129 (50.5 bits), Expect = 0.00016, P = 0.00016
Identities = 113/452 (25%), Positives = 190/452 (42%)
Query: 12 RNLDNPGLITINLNANPIQPV-EGAFLVARSLLYLYMQECTLS-KINPQFFTNLTTLNKL 69
+NL N L ++L+ N V + L L +L ++E L+ + + + L +
Sbjct: 264 QNLTN--LYELDLSYNKFFGVIPSSLLTLPFLAHLALRENNLAGSVEVSNSSTSSRLEIM 321
Query: 70 DLSGNPL--RIIEPGVFDPLTSLEYLMLNRCNLTY-ISPSAFDNLNHLKTLELSQNKLKS 126
L N +I+EP L +L++L L+ N +Y I F +L L++L+LS N + S
Sbjct: 322 YLGSNHFEGQILEP--ISKLINLKHLDLSFLNTSYPIDLKLFSSLKSLRSLDLSGNSISS 379
Query: 127 ---HIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTL 183
D + L L+ L LR I+ P N+ L ++++ N +
Sbjct: 380 ASLSSDSYIPL----TLEMLTLRHCDINEFP-NILKTLKELVYIDISNNRMKGKIPEWLW 434
Query: 184 GQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGN--------PLSAADLSVALK 235
L+ +L +N S + VN++ L S N PLS VA
Sbjct: 435 SLPLLQSVTLG-NNYFTGFQGSAEILVNSSVLLLYLDSNNFEGALPDLPLSIKGFGVASN 493
Query: 236 PLTKLHRLSLRNCGLSRLPAN--TFHRFT-----CLQELDISH---NPLIDAFTALLSPL 285
T LS+ C S L A +++ FT CL+ L++ + N L + L
Sbjct: 494 SFTSEIPLSI--CNRSSLAAIDLSYNNFTGPIPPCLRNLELVYLRNNNLEGSIPDALCDG 551
Query: 286 ESLEHLDMGYSNLQ-RISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNC 344
SL LD+ ++ L ++ RS F+ +SLK L + N++E + L +L VL L +
Sbjct: 552 ASLRTLDVSHNRLTGKLPRS-FVNCSSLKFLSVINNRIEDTFPFWLKALPNLQVLTLRS- 609
Query: 345 GLTRLNETVF--HEN-YTYPDLEELRLSGNPLH-VLPDSTKQYSMRTIPTQIWKNFDFLV 400
R + H+ +P+L +S N LP + Y + + N D +
Sbjct: 610 --NRFYGPISPPHQGPLGFPELRIFEISDNKFTGSLPPN---YFVNWKASSRTMNQDGGL 664
Query: 401 ILFILNETVFHEN-YTYPDLEELRLSGNPLHV 431
+ + E +F E Y Y D +L+ G LH+
Sbjct: 665 YM-VYEEKLFDEGGYGYTDALDLQYKG--LHM 693
>UNIPROTKB|E1B8X9 [details] [associations]
symbol:SLITRK5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007409 "axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 GeneTree:ENSGT00680000099775
OMA:HHRGPAL EMBL:DAAA02033829 EMBL:DAAA02033830 IPI:IPI00697816
Ensembl:ENSBTAT00000013364 Uniprot:E1B8X9
Length = 901
Score = 154 (59.3 bits), Expect = 6.2e-11, Sum P(2) = 6.2e-11
Identities = 108/438 (24%), Positives = 186/438 (42%)
Query: 18 GLITINLNANPIQPVE-GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPL 76
G ++L +N IQ +E GAF R L L++ L + F L +L L + N +
Sbjct: 106 GASILHLGSNVIQDIETGAFHGLRGLRRLHLNNNKLELLRDDTFLGLESLEYLQVDYNYI 165
Query: 77 RIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGN 136
+IEP F L L+ L+LN NL P+ L L+L N+LK + + +L +
Sbjct: 166 SVIEPNAFGKLHLLQVLILND-NLLSSLPNNLFRFVPLTHLDLRGNRLKL-LPYVGLLQH 223
Query: 137 LGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELI-DLDVATTLGQNLVHLDSLDL 195
+ K+ L L ++ N + + WL +++ + L+ D+ T + LD +
Sbjct: 224 MDKVVELQLEENPW-NCSCELISLKDWLDSISYSA--LVGDVVCETPFRLHGRDLDEVSK 280
Query: 196 SNCHLKGPLSEDAFVNATKLRTL-YLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLP 254
+ +S+ T L T YL P S SVA + +++ L+ +R P
Sbjct: 281 QELCPRKLISDYEMRPQTPLSTTGYLHTTPASVN--SVATSS-SAVYKPPLKPPKGTRQP 337
Query: 255 ANTFHRFTCLQ-ELDI---SHNPLIDAFTALLSPLE-------SLEHLDMGYS-NLQ--R 300
R T Q D+ ++ P I T PLE +L+ D+G + N Q +
Sbjct: 338 NKPRVRPTSRQPSKDLGYGNYGPSIAYQTKSPVPLECPTACTCNLQISDLGLNVNCQERK 397
Query: 301 ISRSTFL--KMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENY 358
I L K + K + L+ N + + F T L +L L N ++ + + F +
Sbjct: 398 IESIAELQPKPYNPKKMYLTENYIALVRRSDFLEATGLDLLHLGNNRISMIQDRAFGD-- 455
Query: 359 TYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYT-YP 417
+L L L+GN + L Y ++++ +L + + L + + P
Sbjct: 456 -LTNLRRLYLNGNRIERLSPELF-YGLQSL--------QYLFLQYNLIREIQPGTFDPVP 505
Query: 418 DLEELRLSGNPLHVLPTG 435
+L+ L L+ N L LP+G
Sbjct: 506 NLQLLFLNNNLLQTLPSG 523
Score = 145 (56.1 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 50/156 (32%), Positives = 74/156 (47%)
Query: 14 LDNPGLITINLNANPIQPVEG-AFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLS 72
L+ GL ++L N I ++ AF +L LY+ + +++P+ F L +L L L
Sbjct: 430 LEATGLDLLHLGNNRISMIQDRAFGDLTNLRRLYLNGNRIERLSPELFYGLQSLQYLFLQ 489
Query: 73 GNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSA-FDNLNHLKTLELSQNKLKSHIDWT 131
N +R I+PG FDP+ +L+ L LN NL PS F L L+ L L N S + +
Sbjct: 490 YNLIREIQPGTFDPVPNLQLLFLNN-NLLQTLPSGVFSGLTLLR-LNLRSNHFTS-LPVS 546
Query: 132 LVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNL 167
VL L L +DL + D V W+ L
Sbjct: 547 RVLDQLTSLIQIDLHDNPWDCTCD-VVGMKLWVEQL 581
Score = 141 (54.7 bits), Expect = 8.4e-06, P = 8.4e-06
Identities = 47/151 (31%), Positives = 68/151 (45%)
Query: 45 LYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYIS 104
+Y+ E ++ + F T L+ L L N + +I+ F LT+L L LN + +S
Sbjct: 414 MYLTENYIALVRRSDFLEATGLDLLHLGNNRISMIQDRAFGDLTNLRRLYLNGNRIERLS 473
Query: 105 PSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWL 164
P F L L+ L L N ++ T + L L L + + LP VF+ T L
Sbjct: 474 PELFYGLQSLQYLFLQYNLIREIQPGTF--DPVPNLQLLFLNNNLLQTLPSGVFSGLTLL 531
Query: 165 RNLNLAENELIDLDVATTLGQNLVHLDSLDL 195
R LNL N L V+ L Q L L +DL
Sbjct: 532 R-LNLRSNHFTSLPVSRVLDQ-LTSLIQIDL 560
Score = 134 (52.2 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 45/138 (32%), Positives = 70/138 (50%)
Query: 36 FLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLML 95
FL A L L++ +S I + F +LT L +L L+GN + + P +F L SL+YL L
Sbjct: 429 FLEATGLDLLHLGNNRISMIQDRAFGDLTNLRRLYLNGNRIERLSPELFYGLQSLQYLFL 488
Query: 96 NRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLP- 154
+ I P FD + +L+ L L+ N L++ V L L L+LR + ++LP
Sbjct: 489 QYNLIREIQPGTFDPVPNLQLLFLNNNLLQTLPSG--VFSGLTLL-RLNLRSNHFTSLPV 545
Query: 155 DNVFANNTWLRNLNLAEN 172
V T L ++L +N
Sbjct: 546 SRVLDQLTSLIQIDLHDN 563
Score = 133 (51.9 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 49/167 (29%), Positives = 73/167 (43%)
Query: 230 LSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLE 289
LS P ++ L L LSRL N F +T L + N + D T L L
Sbjct: 73 LSEISPPRFPIYHLLLSGNLLSRLYPNEFVNYTGASILHLGSNVIQDIETGAFHGLRGLR 132
Query: 290 HLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRL 349
L + + L+ + TFL + SL+ L + N + +E F L L VL LN+ L+ L
Sbjct: 133 RLHLNNNKLELLRDDTFLGLESLEYLQVDYNYISVIEPNAFGKLHLLQVLILNDNLLSSL 192
Query: 350 NETVFHENYTYPDLEELRLSGNPLHVLPD-STKQYSMRTIPTQIWKN 395
+F + L L L GN L +LP Q+ + + Q+ +N
Sbjct: 193 PNNLFR----FVPLTHLDLRGNRLKLLPYVGLLQHMDKVVELQLEEN 235
Score = 128 (50.1 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 47/157 (29%), Positives = 77/157 (49%)
Query: 216 RTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLI 275
+ +YL+ N ++ S L+ T L L L N +S + F T L+ L ++ N +
Sbjct: 412 KKMYLTENYIALVRRSDFLEA-TGLDLLHLGNNRISMIQDRAFGDLTNLRRLYLNGNRIE 470
Query: 276 DAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTH 335
L L+SL++L + Y+ ++ I TF + +L+ L L+ N L+TL SG+F LT
Sbjct: 471 RLSPELFYGLQSLQYLFLQYNLIREIQPGTFDPVPNLQLLFLNNNLLQTLPSGVFSGLTL 530
Query: 336 LSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNP 372
L L L + T L + + T L ++ L NP
Sbjct: 531 LR-LNLRSNHFTSLPVSRVLDQLT--SLIQIDLHDNP 564
Score = 125 (49.1 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 45/160 (28%), Positives = 72/160 (45%)
Query: 15 DNPGLITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGN 74
+ G++T++ I + + +L + LS++ P F N T + L L N
Sbjct: 56 EKDGILTVSCENRGIISLSEISPPRFPIYHLLLSGNLLSRLYPNEFVNYTGASILHLGSN 115
Query: 75 PLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVL 134
++ IE G F L L L LN L + F L L+ L++ N + S I+
Sbjct: 116 VIQDIETGAFHGLRGLRRLHLNNNKLELLRDDTFLGLESLEYLQVDYNYI-SVIEPN-AF 173
Query: 135 GNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENEL 174
G L L L L + +S+LP+N+F L +L+L N L
Sbjct: 174 GKLHLLQVLILNDNLLSSLPNNLF-RFVPLTHLDLRGNRL 212
Score = 108 (43.1 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 42/136 (30%), Positives = 64/136 (47%)
Query: 19 LITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRI 78
L++ NL + + P E S+L+L + I F L L +L L+ N L +
Sbjct: 87 LLSGNLLSR-LYPNEFVNYTGASILHLGSN--VIQDIETGAFHGLRGLRRLHLNNNKLEL 143
Query: 79 IEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLG 138
+ F L SLEYL ++ ++ I P+AF L+ L+ L L+ N L S + L
Sbjct: 144 LRDDTFLGLESLEYLQVDYNYISVIEPNAFGKLHLLQVLILNDNLLSSLPN---NLFRFV 200
Query: 139 KLDTLDLRQSGISNLP 154
L LDLR + + LP
Sbjct: 201 PLTHLDLRGNRLKLLP 216
Score = 105 (42.0 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 45/145 (31%), Positives = 66/145 (45%)
Query: 150 ISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAF 209
+S L N F N T L+L N + D++ G L L L L+N L+ L +D F
Sbjct: 93 LSRLYPNEFVNYTGASILHLGSNVIQDIETGAFHG--LRGLRRLHLNNNKLE-LLRDDTF 149
Query: 210 VNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDI 269
+ L L + N +S + + A L L L L + LS LP N F RF L LD+
Sbjct: 150 LGLESLEYLQVDYNYISVIEPN-AFGKLHLLQVLILNDNLLSSLPNNLF-RFVPLTHLDL 207
Query: 270 SHNPL-IDAFTALLSPLESLEHLDM 293
N L + + LL ++ + L +
Sbjct: 208 RGNRLKLLPYVGLLQHMDKVVELQL 232
Score = 89 (36.4 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 47/172 (27%), Positives = 72/172 (41%)
Query: 267 LDIS-HNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETL 325
L +S N I + + + P + HL + + L R+ + F+ T L L N ++ +
Sbjct: 61 LTVSCENRGIISLSEISPPRFPIYHLLLSGNLLSRLYPNEFVNYTGASILHLGSNVIQDI 120
Query: 326 ESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQYSM 385
E+G F L L L LNN L L + F LE L++ N + V+
Sbjct: 121 ETGAFHGLRGLRRLHLNNNKLELLRDDTF---LGLESLEYLQVDYNYISVIE-------- 169
Query: 386 RTIPTQIWKNFDFLVILFILNETVFHE--N--YTYPDLEELRLSGNPLHVLP 433
P K L +L ILN+ + N + + L L L GN L +LP
Sbjct: 170 ---PNAFGK-LHLLQVL-ILNDNLLSSLPNNLFRFVPLTHLDLRGNRLKLLP 216
Score = 85 (35.0 bits), Expect = 6.2e-11, Sum P(2) = 6.2e-11
Identities = 38/133 (28%), Positives = 51/133 (38%)
Query: 458 LPPNVFNNTRNITSLNLANNNLSMTSELSFQFXXXXXXXXXXXXXXXXXTHISPTVLRHN 517
+ P F+ N+ L L NNNL T S F +S VL
Sbjct: 496 IQPGTFDPVPNLQLLFL-NNNLLQTLP-SGVFSGLTLLRLNLRSNHFTSLPVS-RVLDQL 552
Query: 518 RAITSIKLVGNPWKCDCNIADMWEWATREKGDIGVLVGST---TPTEIGFGASRK-KKGL 573
++ I L NPW C C++ M W + K GVLV P + R K L
Sbjct: 553 TSLIQIDLHDNPWDCTCDVVGMKLWVEQLKA--GVLVDEVICKAPKKFAETDMRSIKSEL 610
Query: 574 VC--YFDIF-TTP 583
+C Y D+ +TP
Sbjct: 611 LCPDYSDVVVSTP 623
Score = 77 (32.2 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 40/133 (30%), Positives = 63/133 (47%)
Query: 190 LDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVAL-KPLTKLHRLSLRNC 248
LD L L N + + + AF + T LR LYL+GN + LS L L L L L+
Sbjct: 435 LDLLHLGNNRIS-MIQDRAFGDLTNLRRLYLNGNRIER--LSPELFYGLQSLQYLFLQYN 491
Query: 249 GLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFL- 307
+ + TF LQ L +++N L + + S L +L L++ ++ + S L
Sbjct: 492 LIREIQPGTFDPVPNLQLLFLNNNLLQTLPSGVFSGL-TLLRLNLRSNHFTSLPVSRVLD 550
Query: 308 KMTSLKTLILSGN 320
++TSL + L N
Sbjct: 551 QLTSLIQIDLHDN 563
Score = 39 (18.8 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 463 FNNTRNITSLNLANNNLSMTSELSF 487
F + L+L NN +SM + +F
Sbjct: 429 FLEATGLDLLHLGNNRISMIQDRAF 453
WARNING: HSPs involving 853 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.136 0.407 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 694 661 0.00097 120 3 11 22 0.39 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1103
No. of states in DFA: 622 (66 KB)
Total size of DFA: 353 KB (2175 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:02
No. of threads or processors used: 24
Search cpu time: 58.37u 0.11s 58.48t Elapsed: 00:00:51
Total cpu time: 58.78u 0.12s 58.90t Elapsed: 00:00:53
Start: Thu Aug 15 12:47:52 2013 End: Thu Aug 15 12:48:45 2013
WARNINGS ISSUED: 2