RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy3329
(694 letters)
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Length = 305
Score = 102 bits (255), Expect = 1e-24
Identities = 67/309 (21%), Positives = 128/309 (41%), Gaps = 22/309 (7%)
Query: 41 SLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNL 100
L + + L K+ + L DL N + I+ G F L +L L+L +
Sbjct: 11 HLRVVQCSDLGLEKVPKDLPPDTALL---DLQNNKITEIKDGDFKNLKNLHTLILINNKI 67
Query: 101 TYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFAN 160
+ ISP AF L L+ L LS+N+LK L L L + ++ I+ + +VF
Sbjct: 68 SKISPGAFAPLVKLERLYLSKNQLKE-----LPEKMPKTLQELRVHENEITKVRKSVFNG 122
Query: 161 NTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYL 220
+ + L N L + Q + L + +++ ++ + + L L+L
Sbjct: 123 LNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGLP---PSLTELHL 178
Query: 221 SGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTA 280
GN ++ D + +LK L L +L L +S + + L+EL +++N L+
Sbjct: 179 DGNKITKVDAA-SLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKVPGG 237
Query: 281 LLSPLESLEHLDMGYSNLQRISRSTF------LKMTSLKTLILSGNKLETLE--SGLFQN 332
L + ++ + + +N+ I + F K S + L N ++ E F+
Sbjct: 238 LAD-HKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRC 296
Query: 333 LTHLSVLEL 341
+ + ++L
Sbjct: 297 VYVRAAVQL 305
Score = 77.0 bits (188), Expect = 6e-16
Identities = 63/265 (23%), Positives = 110/265 (41%), Gaps = 18/265 (6%)
Query: 17 PGLITINLNANPIQPV-EGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNP 75
P ++L N I + +G F ++L L + +SKI+P F L L +L LS N
Sbjct: 31 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQ 90
Query: 76 LRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLG 135
L+ + + L L +T + S F+ LN + +EL N LKS
Sbjct: 91 LKELPEKMPKTLQELRVHE---NEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQ 147
Query: 136 NLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDL 195
+ KL + + + I+ +P + + L L+L N++ +D A+ + L +L L L
Sbjct: 148 GMKKLSYIRIADTNITTIPQGLPPS---LTELHLDGNKITKVDAASL--KGLNNLAKLGL 202
Query: 196 SNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPA 255
S + + N LR L+L+ N L +A + + L N +S + +
Sbjct: 203 SFNSISAV-DNGSLANTPHLRELHLNNNKLVKVPGGLA--DHKYIQVVYLHNNNISAIGS 259
Query: 256 NTFH------RFTCLQELDISHNPL 274
N F + + + NP+
Sbjct: 260 NDFCPPGYNTKKASYSGVSLFSNPV 284
Score = 73.5 bits (179), Expect = 8e-15
Identities = 56/315 (17%), Positives = 108/315 (34%), Gaps = 42/315 (13%)
Query: 213 TKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHN 272
L L N ++ K L LH L L N +S++ F L+ L +S N
Sbjct: 31 PDTALLDLQNNKITEIK-DGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKN 89
Query: 273 PLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQN 332
L + + L+ L + + +++ + +M + L + K +E+G FQ
Sbjct: 90 QLKELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVV-ELGTNPLKSSGIENGAFQG 148
Query: 333 LTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQI 392
+ LS + + + +T + + + P L EL L GN + + ++ + +
Sbjct: 149 MKKLSYIRIADTNITTIPQGLP------PSLTELHLDGNKITKVDAASLK--------GL 194
Query: 393 WKNFDFLVILFILNETVFHENYTYPDLEELRLSGNPLHVLPTGNLLPPQLSRLRSLDLSR 452
+ ++ P L EL L+ N L +P G ++ + L
Sbjct: 195 NNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKVPGGL---ADHKYIQVVYLHN 251
Query: 453 CKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSFQFLDVLLELESLDLSNNNLTH--IS 510
I + N F T + L +N + + I
Sbjct: 252 NNISAIGSNDFCPPGYNTKK---------------------ASYSGVSLFSNPVQYWEIQ 290
Query: 511 PTVLRHNRAITSIKL 525
P+ R +++L
Sbjct: 291 PSTFRCVYVRAAVQL 305
Score = 73.1 bits (178), Expect = 1e-14
Identities = 56/296 (18%), Positives = 107/296 (36%), Gaps = 30/296 (10%)
Query: 243 LSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRIS 302
+ + GL ++P + LD+ +N + + L++L L + + + +IS
Sbjct: 15 VQCSDLGLEKVPKDLP---PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKIS 71
Query: 303 RSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPD 362
F + L+ L LS N+L+ L + + L L V + +T++ ++VF+
Sbjct: 72 PGAFAPLVKLERLYLSKNQLKELPEKMPKTLQELRV---HENEITKVRKSVFNGLNQMIV 128
Query: 363 LEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTYPDLEEL 422
+E + + + + N + P L EL
Sbjct: 129 VELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTI------------PQGLPPSLTEL 176
Query: 423 RLSGNPLHVLPTGNLLPPQLSRLRSLDLSRCKIDYLPPNVFNNTRNITSLNLANNNLSMT 482
L GN + + +L L+ L L LS I + NT ++ L+L NN L
Sbjct: 177 HLDGNKITKVDAASL--KGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKV 234
Query: 483 SELSFQFLDVLLELESLDLSNNNLTHISPTV------LRHNRAITSIKLVGNPWKC 532
++ + L NNN++ I + + + L NP +
Sbjct: 235 PGGLAD----HKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQY 286
Score = 57.4 bits (137), Expect = 2e-09
Identities = 40/233 (17%), Positives = 75/233 (32%), Gaps = 44/233 (18%)
Query: 310 TSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLS 369
L L NK+ ++ G F+NL +L L L N +++++ F LE L LS
Sbjct: 31 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPL---VKLERLYLS 87
Query: 370 GNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTYPDLEELRLSGNPL 429
N L LP+ + +ELR+ N +
Sbjct: 88 KNQLKELPEKMPKTL-----------------------------------QELRVHENEI 112
Query: 430 HVLPTGNLLPPQLSRLRSLDLSRCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSFQF 489
+ + L + K + F + ++ + +A+ N++ +
Sbjct: 113 TKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQ----- 167
Query: 490 LDVLLELESLDLSNNNLTHISPTVLRHNRAITSIKLVGNPWKCDCNIADMWEW 542
+ L L L N +T + L+ + + L N N +
Sbjct: 168 -GLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTP 219
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 284
Score = 66.8 bits (161), Expect = 1e-12
Identities = 52/252 (20%), Positives = 93/252 (36%), Gaps = 23/252 (9%)
Query: 310 TSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLS 369
+ + + L GN++ + + F+ +L++L L++ L R++ F
Sbjct: 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQ------- 84
Query: 370 GNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFH----ENYTYPDLEELRLS 425
D + +R++ + L L + + L+ L L
Sbjct: 85 -------LDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQ 137
Query: 426 GNPLHVLPTGNLLPPQLSRLRSLDLSRCKIDYLPPNVFNNTRNITSLNLANNNLSMTSEL 485
N L LP L L L +I +P F ++ L L N ++
Sbjct: 138 DNALQALPDDTFRDLG--NLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPH 195
Query: 486 SFQFLDVLLELESLDLSNNNLTHISPTVLRHNRAITSIKLVGNPWKCDCNIADMWEWATR 545
+F+ L L +L L NNL+ + L RA+ ++L NPW CDC +W W +
Sbjct: 196 AFRDLG---RLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRARPLWAWLQK 252
Query: 546 EKGDIGVLVGST 557
+G + S
Sbjct: 253 FRGSSSEVPCSL 264
Score = 57.1 bits (136), Expect = 2e-09
Identities = 61/248 (24%), Positives = 91/248 (36%), Gaps = 9/248 (3%)
Query: 52 LSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNL 111
L + + L GN + + F +L L L+ L I +AF L
Sbjct: 23 LQAVPVGIPAASQRI---FLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGL 79
Query: 112 NHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAE 171
L+ L+LS N + LG+L TL L + G+ L +F L+ L L +
Sbjct: 80 ALLEQLDLSDNAQLRSV-DPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQD 138
Query: 172 NELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLS 231
N L L T ++L +L L L + + E AF L L L N ++
Sbjct: 139 NALQALPDDTF--RDLGNLTHLFLHGNRISS-VPERAFRGLHSLDRLLLHQNRVAHVHPH 195
Query: 232 VALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHL 291
A + L +L L L LS LP LQ L ++ NP + L+
Sbjct: 196 -AFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDC-RARPLWAWLQKF 253
Query: 292 DMGYSNLQ 299
S +
Sbjct: 254 RGSSSEVP 261
Score = 56.0 bits (133), Expect = 5e-09
Identities = 41/207 (19%), Positives = 71/207 (34%), Gaps = 22/207 (10%)
Query: 189 HLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNC 248
+ L + + +F L L+L N L+ D + N
Sbjct: 33 ASQRIFLHGNRISH-VPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNA 91
Query: 249 GLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLK 308
L + TFH L L + L + L L +L++L + + LQ + TF
Sbjct: 92 QLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRD 151
Query: 309 MTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPD------ 362
+ +L L L GN++ ++ F+ L L L L+ + ++ F +
Sbjct: 152 LGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFAN 211
Query: 363 ---------------LEELRLSGNPLH 374
L+ LRL+ NP
Sbjct: 212 NLSALPTEALAPLRALQYLRLNDNPWV 238
Score = 30.2 bits (66), Expect = 0.90
Identities = 22/110 (20%), Positives = 35/110 (31%), Gaps = 5/110 (4%)
Query: 17 PGLITINLNANP-IQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNP 75
L + L+ N AF L+ LY+ LS + + L L L L+ NP
Sbjct: 177 HSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNP 236
Query: 76 LRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLK 125
+ L+ + + P L L+ N L+
Sbjct: 237 WV-CDCRARPLWAWLQKFRGSSSEVPCSLPQ---RLAGRDLKRLAANDLQ 282
Score = 27.5 bits (59), Expect = 5.5
Identities = 7/47 (14%), Positives = 16/47 (34%), Gaps = 3/47 (6%)
Query: 447 SLDLSRCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSFQFLDVL 493
+ + + +P + + + L N +S SF+ L
Sbjct: 15 TTSCPQQGLQAVPVGIPAAS---QRIFLHGNRISHVPAASFRACRNL 58
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of
glycoprotein Ib alpha {Human (Homo sapiens) [TaxId:
9606]}
Length = 266
Score = 65.1 bits (157), Expect = 3e-12
Identities = 57/260 (21%), Positives = 78/260 (30%), Gaps = 47/260 (18%)
Query: 283 SPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELN 342
S + S ++ NL + L LS N L T T L+ L L+
Sbjct: 7 SKVASHLEVNCDKRNLTALPPDLP---KDTTILHLSENLLYTFSLATLMPYTRLTQLNLD 63
Query: 343 NCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVIL 402
T + T P L L LS N L LP + T+ + L +
Sbjct: 64 RA-----ELTKLQVDGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLG 118
Query: 403 FILNETVFHENYTYPDLEELRLSGNPLHVLPTGNLLPPQLSRLRSLDLSRCKIDYLPPNV 462
+ E Y N L LP G L P L+ + LP +
Sbjct: 119 ALRGLGELQELYLKG---------NELKTLPPGLLTPTPKLEKL--SLANNNLTELPAGL 167
Query: 463 FNNTRNITSLNLANNNLSMTSELSFQFLDVLLELESLDLSNNNLTHISPTVLRHNRAITS 522
N L L++L L N+L I P + +
Sbjct: 168 LNG---------------------------LENLDTLLLQENSLYTI-PKGFFGSHLLPF 199
Query: 523 IKLVGNPWKCDCNIADMWEW 542
L GNPW C+C I W
Sbjct: 200 AFLHGNPWLCNCEILYFRRW 219
Score = 52.8 bits (125), Expect = 4e-08
Identities = 46/207 (22%), Positives = 62/207 (29%), Gaps = 13/207 (6%)
Query: 41 SLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNL 100
S L + + L+ + P + T L LS N L P T L L L+R L
Sbjct: 11 SHLEVNCDKRNLTALPPDLPKDTTIL---HLSENLLYTFSLATLMPYTRLTQLNLDRAEL 67
Query: 101 TYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFAN 160
T L L L+ L L LD+ + +++LP
Sbjct: 68 TK-----LQVDGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRG 122
Query: 161 NTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYL 220
L+ L L NEL L + SL +N L L TL L
Sbjct: 123 LGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLT---ELPAGLLNGLENLDTLLL 179
Query: 221 SGNPLSAADLSVALKPLTKLHRLSLRN 247
N S + L L
Sbjct: 180 QEN--SLYTIPKGFFGSHLLPFAFLHG 204
Score = 48.2 bits (113), Expect = 1e-06
Identities = 46/209 (22%), Positives = 74/209 (35%), Gaps = 11/209 (5%)
Query: 135 GNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLD 194
+ ++ + ++ LP ++ + L+L+EN L +AT L L+
Sbjct: 7 SKVASHLEVNCDKRNLTALPPDLPKD---TTILHLSENLLYTFSLAT--LMPYTRLTQLN 61
Query: 195 LSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLP 254
L L + L + L + L L L + L+ LP
Sbjct: 62 LDRAELTKLQVDGTLPVLGTLDLSHNQLQSLPLLG-----QTLPALTVLDVSFNRLTSLP 116
Query: 255 ANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKT 314
LQEL + N L LL+P LE L + +NL + + +L T
Sbjct: 117 LGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDT 176
Query: 315 LILSGNKLETLESGLFQNLTHLSVLELNN 343
L+L N L T+ G F L L+
Sbjct: 177 LLLQENSLYTIPKGFF-GSHLLPFAFLHG 204
Score = 42.8 bits (99), Expect = 7e-05
Identities = 43/216 (19%), Positives = 71/216 (32%), Gaps = 15/216 (6%)
Query: 108 FDNLNHLKTLELSQNKLKSHIDWTLVLGNLGK-LDTLDLRQSGISNLPDNVFANNTWLRN 166
+ + + L + + +L K L L ++ + T L
Sbjct: 6 VSKVASHLEVNCDKRNLTA------LPPDLPKDTTILHLSENLLYTFSLATLMPYTRLTQ 59
Query: 167 LNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLS 226
LNL EL Q L L + S T+
Sbjct: 60 LNLDRAELTK-------LQVDGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRL 112
Query: 227 AADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLE 286
+ AL+ L +L L L+ L LP L++L +++N L + LL+ LE
Sbjct: 113 TSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLE 172
Query: 287 SLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKL 322
+L+ L + ++L I + F L L GN
Sbjct: 173 NLDTLLLQENSLYTIPKGFF-GSHLLPFAFLHGNPW 207
Score = 40.5 bits (93), Expect = 4e-04
Identities = 40/186 (21%), Positives = 64/186 (34%), Gaps = 9/186 (4%)
Query: 40 RSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCN 99
+ L++ E L + T L +L+L + + V L L L L+
Sbjct: 31 KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRA--ELTKLQVDGTLPVLGTLDLSHNQ 88
Query: 100 LTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFA 159
L + + L LG+L L L+ + + LP +
Sbjct: 89 LQSLPLLGQTLPALTVLDVSFNRLTSLPLGA---LRGLGELQELYLKGNELKTLPPGLLT 145
Query: 160 NNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLY 219
L L+LA N L +L L +LD+L L L + + F + L +
Sbjct: 146 PTPKLEKLSLANNNLTELPAGLL--NGLENLDTLLLQENSLY-TIPKGFF-GSHLLPFAF 201
Query: 220 LSGNPL 225
L GNP
Sbjct: 202 LHGNPW 207
Score = 29.7 bits (65), Expect = 1.2
Identities = 15/51 (29%), Positives = 19/51 (37%), Gaps = 1/51 (1%)
Query: 27 NPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLR 77
N + G +L L +QE +L I FF L L GNP
Sbjct: 159 NLTELPAGLLNGLENLDTLLLQENSLYTIPKGFF-GSHLLPFAFLHGNPWL 208
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes
[TaxId: 1639]}
Length = 384
Score = 62.3 bits (150), Expect = 7e-11
Identities = 72/360 (20%), Positives = 123/360 (34%), Gaps = 50/360 (13%)
Query: 41 SLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNL 100
+ L + I+ L L +++ S N L I P LT L +++N +
Sbjct: 45 QVTTLQADRLGIKSIDG--VEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQI 100
Query: 101 TYI-------SPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNL 153
I + + N+ T L + L + + L S
Sbjct: 101 ADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 160
Query: 154 PDNVFANNTWLRNLNLAENELIDL--DVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVN 211
N + L NL E I ++ L +L+SL +N +
Sbjct: 161 FGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITP---LGI 217
Query: 212 ATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISH 271
T L L L+GN L L LT L L L N +S L T L EL +
Sbjct: 218 LTNLDELSLNGNQLKDIG---TLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGA 272
Query: 272 NPLID--------------------AFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTS 311
N + + + +S L++L +L + ++N+ IS +T
Sbjct: 273 NQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDIS--PVSSLTK 330
Query: 312 LKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGN 371
L+ L + NK+ + S NLT+++ L + ++ L + +L L+
Sbjct: 331 LQRLFFANNKVSDVSS--LANLTNINWLSAGHNQISDLTPLANLTR-----ITQLGLNDQ 383
Score = 61.2 bits (147), Expect = 1e-10
Identities = 72/445 (16%), Positives = 134/445 (30%), Gaps = 81/445 (18%)
Query: 61 TNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELS 120
T L K L + + L + L +R + I + LN+L + S
Sbjct: 19 TALAEKMKTVLGKT--NVTDTVSQTDLDQVTTLQADRLGIKSIDG--VEYLNNLTQINFS 74
Query: 121 QNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVA 180
N+L L NL KL + + + I+++ N L + ID
Sbjct: 75 NNQLTDITP----LKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKN 130
Query: 181 TTLGQNLVHLD-SLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTK 239
T L ++ + + L+
Sbjct: 131 LTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT--------------- 175
Query: 240 LHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQ 299
L + + T L+ L ++N + D + +L+ L + + L+
Sbjct: 176 -TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILT--NLDELSLNGNQLK 232
Query: 300 RISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYT 359
I T +T+L L L+ N++ L LT L+ L+L ++ +
Sbjct: 233 DI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNI---------- 278
Query: 360 YPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTYPDL 419
+PL L T I + +L
Sbjct: 279 -----------SPLAGLTALTNLELNENQLEDISPISNL------------------KNL 309
Query: 420 EELRLSGNPLHVLPTGNLLPPQLSRLRSLDLSRCKIDYLPPNVFNNTRNITSLNLANNNL 479
L L N + + L++L+ L + K+ + N NI L+ +N +
Sbjct: 310 TYLTLYFNNISDISP----VSSLTKLQRLFFANNKVSDVSS--LANLTNINWLSAGHNQI 363
Query: 480 SMTSELSFQFLDVLLELESLDLSNN 504
S + L+ L + L L++
Sbjct: 364 SDLTPLAN-----LTRITQLGLNDQ 383
Score = 59.6 bits (143), Expect = 4e-10
Identities = 70/427 (16%), Positives = 144/427 (33%), Gaps = 69/427 (16%)
Query: 109 DNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLN 168
L L + + T+ +L ++ TL + GI ++ + NN L +N
Sbjct: 19 TALAEKMKTVLGKTNVTD----TVSQTDLDQVTTLQADRLGIKSIDGVEYLNN--LTQIN 72
Query: 169 LAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAA 228
+ N+L D+ L + + L + + + + +
Sbjct: 73 FSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLT 132
Query: 229 DLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELD-------ISHNPLIDAFTAL 281
+L+ + +S + S + ++ T L+ L + + + ++
Sbjct: 133 NLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISV 192
Query: 282 LSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLEL 341
L+ L +LE L + + I+ +T+L L L+GN+L+ + + +LT+L+ L+L
Sbjct: 193 LAKLTNLESLIATNNQISDITPLGI--LTNLDELSLNGNQLKDIGT--LASLTNLTDLDL 248
Query: 342 NNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVI 401
N ++ L L EL+L N + + ++ + + D
Sbjct: 249 ANNQISNLAPLSGLTK-----LTELKLGANQISNISPLAGLTALTNLELNENQLEDISP- 302
Query: 402 LFILNETVFHENYTYPDLEELRLSGNPLHVLPTGNLLPPQLSRLRSLDLSRCKIDYLPPN 461
L L L L I + P
Sbjct: 303 -------------------------------------ISNLKNLTYLTLYFNNISDISP- 324
Query: 462 VFNNTRNITSLNLANNNLSMTSELSFQFLDVLLELESLDLSNNNLTHISPTVLRHNRAIT 521
++ + L ANN +S S L+ L + L +N ++ ++P L + IT
Sbjct: 325 -VSSLTKLQRLFFANNKVSDVSSLAN-----LTNINWLSAGHNQISDLTP--LANLTRIT 376
Query: 522 SIKLVGN 528
+ L
Sbjct: 377 QLGLNDQ 383
Score = 50.8 bits (120), Expect = 3e-07
Identities = 44/177 (24%), Positives = 70/177 (39%), Gaps = 31/177 (17%)
Query: 16 NPGLITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNP 75
L ++LN N ++ + G +L L + +S + P + LT L +L L N
Sbjct: 218 LTNLDELSLNGNQLKDI-GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQ 274
Query: 76 LRIIEP--------------------GVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLK 115
+ I P L +L YL L N++ ISP +L L+
Sbjct: 275 ISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISP--VSSLTKLQ 332
Query: 116 TLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAEN 172
L + NK+ S + L NL ++ L + IS+L AN T + L L +
Sbjct: 333 RLFFANNKV-SDVSS---LANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQ 383
Score = 37.3 bits (85), Expect = 0.006
Identities = 18/103 (17%), Positives = 37/103 (35%), Gaps = 9/103 (8%)
Query: 440 PQLSRLRSLDLSRCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSFQFLDVLLELESL 499
L+ L + + + +T+L + S ++ L L +
Sbjct: 19 TALAEKMKTVLGKTNVTDTVS--QTDLDQVTTLQADRLGIK-----SIDGVEYLNNLTQI 71
Query: 500 DLSNNNLTHISPTVLRHNRAITSIKLVGNPWKCDCNIADMWEW 542
+ SNN LT I+P L++ + I + N +A++
Sbjct: 72 NFSNNQLTDITP--LKNLTKLVDILMNNNQIADITPLANLTNL 112
Score = 35.4 bits (80), Expect = 0.021
Identities = 19/96 (19%), Positives = 32/96 (33%), Gaps = 5/96 (5%)
Query: 1 MWQGHPVYNDRRNLDNPGLITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFF 60
+ + + + L + L N I + L L+ +S +
Sbjct: 291 ELNENQLEDISPISNLKNLTYLTLYFNNISDIS-PVSSLTKLQRLFFANNKVS--DVSSL 347
Query: 61 TNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLN 96
NLT +N L N + + P LT + L LN
Sbjct: 348 ANLTNINWLSAGHNQISDLTP--LANLTRITQLGLN 381
Score = 28.8 bits (63), Expect = 2.6
Identities = 38/230 (16%), Positives = 80/230 (34%), Gaps = 9/230 (3%)
Query: 313 KTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNP 372
+ + K ++ +L ++ L+ + G+ ++ + N L ++ S N
Sbjct: 23 EKMKTVLGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNN-----LTQINFSNNQ 77
Query: 373 LHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTYPDLEELRLSGNPLHVL 432
L + + I + D + + N T + + L+ L
Sbjct: 78 LTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRL 137
Query: 433 PTGNLLPPQLSRLRSLDLSRCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSFQFLDV 492
+ +S L L + N+T+L + + + S++S
Sbjct: 138 ELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK-- 195
Query: 493 LLELESLDLSNNNLTHISPTVLRHNRAITSIKLVGNPWKCDCNIADMWEW 542
L LESL +NN ++ I+P + N + + L GN K +A +
Sbjct: 196 LTNLESLIATNNQISDITPLGILTN--LDELSLNGNQLKDIGTLASLTNL 243
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2
{Human (Homo sapiens) [TaxId: 9606]}
Length = 284
Score = 56.3 bits (134), Expect = 4e-09
Identities = 38/233 (16%), Positives = 82/233 (35%), Gaps = 6/233 (2%)
Query: 21 TINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIE 80
T++L + P L+++ ++ + + + F+ + +DLS + + +
Sbjct: 4 TLDLTGKNLHPDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFR-VQHMDLSNSVIEVST 62
Query: 81 -PGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKL---KSHIDWTLVLGN 136
G+ + L+ L L L+ + ++L L LS +
Sbjct: 63 LHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSR 122
Query: 137 LGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAE-NELIDLDVATTLGQNLVHLDSLDL 195
L +L+ ++ V + + LNL+ + + +TL + +L LDL
Sbjct: 123 LDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDL 182
Query: 196 SNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNC 248
S+ + F L+ L LS + + L + L L +
Sbjct: 183 SDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI 235
Score = 49.3 bits (116), Expect = 6e-07
Identities = 40/273 (14%), Positives = 87/273 (31%), Gaps = 10/273 (3%)
Query: 216 RTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLI 275
+TL L+G L L R + R +Q +D+S++ +
Sbjct: 3 QTLDLTGKNLHPDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFR---VQHMDLSNSVIE 59
Query: 276 D-AFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLT 334
+LS L++L + L +T K ++L L LSG + + +
Sbjct: 60 VSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSS 119
Query: 335 HLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWK 394
+ ELN E + +L+ + + ++ +
Sbjct: 120 CSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVH 179
Query: 395 NFDFLVILFILNETVFHENYTYPDLEELRLSGNPLHVLPTGNLLPPQLSRLRSLDLSRCK 454
++ F E + L+ L LS ++P L ++ L++L +
Sbjct: 180 LDLSDSVML--KNDCFQEFFQLNYLQHLSLSRCY-DIIPETLLELGEIPTLKTLQVFGIV 236
Query: 455 IDYLPPNVFNNTRNITSLNLANNNLSMTSELSF 487
D + + L + ++ + + +
Sbjct: 237 PDGTLQLLK---EALPHLQINCSHFTTIARPTI 266
Score = 42.8 bits (99), Expect = 7e-05
Identities = 25/113 (22%), Positives = 44/113 (38%), Gaps = 6/113 (5%)
Query: 163 WLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSG 222
W L+L L L Q ++ + + PL+E + +++ + LS
Sbjct: 2 WQT-LDLTGKNLHPDVTGRLLSQGVI---AFRCPRSFMDQPLAE--HFSPFRVQHMDLSN 55
Query: 223 NPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLI 275
+ + + L L +KL LSL LS NT + + L L++S
Sbjct: 56 SVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGF 108
Score = 40.9 bits (94), Expect = 3e-04
Identities = 56/285 (19%), Positives = 98/285 (34%), Gaps = 29/285 (10%)
Query: 68 KLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLN--HLKTLELSQNKLK 125
LDL+G L P V L S + RC +++ ++ + ++ ++LS + +
Sbjct: 4 TLDLTGKNLH---PDVTGRLLSQGVIAF-RCPRSFMDQPLAEHFSPFRVQHMDLSNSVI- 58
Query: 126 SHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQ 185
+L KL L L +S+ N A N+ L LNL+ TL
Sbjct: 59 EVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLS 118
Query: 186 NLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSL 245
+ LD L+LS C V L +
Sbjct: 119 SCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQL--------------------NLSGY 158
Query: 246 RNCGLSRLPANTFHRFTCLQELDISHNPLI-DAFTALLSPLESLEHLDMGY-SNLQRISR 303
R + R L LD+S + ++ + L L+HL + ++ +
Sbjct: 159 RKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETL 218
Query: 304 STFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTR 348
++ +LKTL + G + L + L HL + + + R
Sbjct: 219 LELGEIPTLKTLQVFGIVPDGTLQLLKEALPHLQINCSHFTTIAR 263
Score = 31.2 bits (69), Expect = 0.35
Identities = 14/125 (11%), Positives = 34/125 (27%), Gaps = 4/125 (3%)
Query: 419 LEELRLSGNPLHVLPTGNLLPPQLSRLRSLDLSRCKI-DYLPPNVFNNTRNITSLNLANN 477
+ R + + + R++ +DLS I + + + +L+L
Sbjct: 25 VIAFRCPRSFMDQPLAEHF---SPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGL 81
Query: 478 NLSMTSELSFQFLDVLLELESLDLSNNNLTHISPTVLRHNRAITSIKLVGNPWKCDCNIA 537
LS + L+ L S + + + +R +
Sbjct: 82 RLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQV 141
Query: 538 DMWEW 542
+
Sbjct: 142 AVAHV 146
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain
{Fission yeast (Schizosaccharomyces pombe) [TaxId:
4896]}
Length = 344
Score = 55.3 bits (131), Expect = 1e-08
Identities = 36/317 (11%), Positives = 82/317 (25%), Gaps = 19/317 (5%)
Query: 207 DAFVNATKLRTLYLSGNPLS---AADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTC 263
+ ++ + LSGN + A LS + L + R+
Sbjct: 25 AVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRL 84
Query: 264 LQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLE 323
L + + L + + + + + + + +L L +
Sbjct: 85 LLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARA 144
Query: 324 TLESGLFQNLTHLS----------VLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPL 373
E + + + LE + +T ++
Sbjct: 145 LQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIE 204
Query: 374 HVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTYPDLEELRLSGNPLHVLP 433
H+L + + F L + N L + LS +
Sbjct: 205 HLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVV 264
Query: 434 TGNLLPPQLSRLRSLDLSRCKID-----YLPPNVFNNTRNITSLNLANNNLSMTSELSFQ 488
+ L++L L +I+ L + ++ L L N S ++ +
Sbjct: 265 D-AFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDDVVDE 323
Query: 489 FLDVLLELESLDLSNNN 505
+V +L +
Sbjct: 324 IREVFSTRGRGELDELD 340
Score = 35.6 bits (80), Expect = 0.017
Identities = 40/348 (11%), Positives = 91/348 (26%), Gaps = 29/348 (8%)
Query: 11 RRNLDNPGLITINLNANPIQPVEGAFLVARSLLYLYMQECTLS----KINPQFFTNLTTL 66
R +++ L + + V L S+ + + T+ + + + L
Sbjct: 2 RFSIEGKSLKLDAITTEDEKSVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDL 61
Query: 67 NKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKS 126
+ S ++ + + L L +L L + S + + +
Sbjct: 62 EIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHT 121
Query: 127 HIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQN 186
++ + N + L N A N + ++ +
Sbjct: 122 PLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKT 181
Query: 187 LVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLR 246
L G E + L+ + + +
Sbjct: 182 FQSHRLLHTVKMVQNGIRPEGIEHLLLEG--------------LAYCQELKVLDLQDNTF 227
Query: 247 NCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLS------PLESLEHLDMGYSNL-- 298
S A + L+EL ++ L A + L+ L + Y+ +
Sbjct: 228 THLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIEL 287
Query: 299 ---QRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNN 343
+ + KM L L L+GN+ + + + S
Sbjct: 288 DAVRTLKTVIDEKMPDLLFLELNGNRFSEEDDVVDEIREVFSTRGRGE 335
Score = 35.6 bits (80), Expect = 0.017
Identities = 14/78 (17%), Positives = 27/78 (34%), Gaps = 11/78 (14%)
Query: 78 IIEPGVFDPLTSLEYLMLNRCNLT-----YISPSAFDNLNHLKTLELSQNKLKSHIDWTL 132
+++ L+ L L + + + + L LEL+ N+ D
Sbjct: 263 VVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDDVVD 322
Query: 133 VLGNL------GKLDTLD 144
+ + G+LD LD
Sbjct: 323 EIREVFSTRGRGELDELD 340
Score = 34.5 bits (77), Expect = 0.036
Identities = 41/306 (13%), Positives = 81/306 (26%), Gaps = 17/306 (5%)
Query: 57 PQFFTNLTTLNKLDLSGNPLRIIE----PGVFDPLTSLEYLMLNRCNLTYISPSAFDNLN 112
++ ++ LSGN + LE + + + L
Sbjct: 24 FAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALR 83
Query: 113 HLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAEN 172
L L KL + G + +D + N +
Sbjct: 84 LLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIAR 143
Query: 173 ELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSV 232
L +L V S+ L+ ++ R L+ +
Sbjct: 144 ALQELAVNKKAKNAPPL-RSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEG 202
Query: 233 ALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLD 292
L + L H + + + P + L +
Sbjct: 203 IEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAA 262
Query: 293 MGYSNLQRISRSTFLKMTSLKTLILSGNKLE-----TLESGLFQNLTHLSVLELNNCGLT 347
+ + L+ L+TL L N++E TL++ + + + L LELN +
Sbjct: 263 VV-------DAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFS 315
Query: 348 RLNETV 353
++ V
Sbjct: 316 EEDDVV 321
Score = 30.6 bits (67), Expect = 0.69
Identities = 14/80 (17%), Positives = 22/80 (27%), Gaps = 11/80 (13%)
Query: 126 SHIDWTLVLGNLGKLDTLDLRQ-----SGISNLPDNVFANNTWLRNLNLAENELIDLDVA 180
+ + L TL L+ + L + L L L N + D
Sbjct: 261 AAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDDV 320
Query: 181 TTLGQNLV------HLDSLD 194
+ + LD LD
Sbjct: 321 VDEIREVFSTRGRGELDELD 340
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor
{Human (Homo sapiens) [TaxId: 9606]}
Length = 242
Score = 53.0 bits (125), Expect = 3e-08
Identities = 24/205 (11%), Positives = 59/205 (28%)
Query: 140 LDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCH 199
L + + + F+ L + +++N+++++ A + +
Sbjct: 31 AIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANN 90
Query: 200 LKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFH 259
L E L + D+ L + + +
Sbjct: 91 LLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVG 150
Query: 260 RFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSG 319
L ++ N + + + + E +NL+ + F + L +S
Sbjct: 151 LSFESVILWLNKNGIQEIHNCAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISR 210
Query: 320 NKLETLESGLFQNLTHLSVLELNNC 344
++ +L S +NL L N
Sbjct: 211 TRIHSLPSYGLENLKKLRARSTYNL 235
Score = 45.7 bits (106), Expect = 7e-06
Identities = 43/237 (18%), Positives = 76/237 (32%), Gaps = 29/237 (12%)
Query: 41 SLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNL 100
S QE +++I N L LR+I+ G F LE + +++ ++
Sbjct: 9 SNRVFLCQESKVTEIPSDLPRNAIEL---RFVLTKLRVIQKGAFSGFGDLEKIEISQNDV 65
Query: 101 TYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFAN 160
+ + + + NL L L + +GI +LPD +
Sbjct: 66 LEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIH 125
Query: 161 NTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLS-----------------------N 197
+ L++ +N I + L L+ +
Sbjct: 126 SLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQLDELNLSD 185
Query: 198 CHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLP 254
+ L D F A+ L +S + + S L+ L KL S N L +LP
Sbjct: 186 NNNLEELPNDVFHGASGPVILDISRTRIHSLP-SYGLENLKKLRARSTYN--LKKLP 239
Score = 44.5 bits (103), Expect = 2e-05
Identities = 28/217 (12%), Positives = 59/217 (27%), Gaps = 20/217 (9%)
Query: 310 TSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLS 369
+ L KL ++ G F L +E++ + + E N + +
Sbjct: 29 RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKA 88
Query: 370 GNPLHVLPDSTKQYSMRTIPTQIWKNFD---------------FLVILFILNETVFHENY 414
N L++ P++ + + I T+ ++
Sbjct: 89 NNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSF 148
Query: 415 TYPDLEELRLSGNPLHVLPTGNLLPPQLSRLRSLDLSRCKIDYLPPNVFNNTRNITSLNL 474
E + L N + N ++ LP +VF+ L++
Sbjct: 149 VGLSFESVILWLNKNGIQEIHNCAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDI 208
Query: 475 ANNNLSMTSELSFQFLDVLLELESLDLSNNNLTHISP 511
+ + + L L S NL +
Sbjct: 209 SRTRIHSLPSYGLENLKKLRA-----RSTYNLKKLPT 240
Score = 43.7 bits (101), Expect = 3e-05
Identities = 9/64 (14%), Positives = 17/64 (26%), Gaps = 2/64 (3%)
Query: 42 LLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLT 101
L ++ F + LD+S + + + L L NL
Sbjct: 179 DELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTY--NLK 236
Query: 102 YISP 105
+
Sbjct: 237 KLPT 240
Score = 40.3 bits (92), Expect = 4e-04
Identities = 36/237 (15%), Positives = 73/237 (30%), Gaps = 7/237 (2%)
Query: 65 TLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKL 124
+ + + I + + L L I AF L+ +E+SQN +
Sbjct: 9 SNRVFLCQESKVTEIPSDLP---RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDV 65
Query: 125 KSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLG 184
I+ + + + + + + F N L+ L ++ +
Sbjct: 66 LEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKH-LPDVHKI 124
Query: 185 QNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLS 244
+L + N ++ + + L+L+ N +
Sbjct: 125 HSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAFNGT-QLDELNL 183
Query: 245 LRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRI 301
N L LP + FH + LDIS + + L L+ L NL+++
Sbjct: 184 SDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARST--YNLKKL 238
Score = 38.7 bits (88), Expect = 0.001
Identities = 29/235 (12%), Positives = 69/235 (29%), Gaps = 12/235 (5%)
Query: 243 LSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRIS 302
+ ++ +P++ EL L S LE +++ +++ +
Sbjct: 13 FLCQESKVTEIPSDLP---RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVI 69
Query: 303 RSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPD 362
+ KL + NL +++ N + PD
Sbjct: 70 EADVFSNL---------PKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPD 120
Query: 363 LEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTYPDLEEL 422
+ ++ L + D+ +++ ++ L H +
Sbjct: 121 VHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQLDE 180
Query: 423 RLSGNPLHVLPTGNLLPPQLSRLRSLDLSRCKIDYLPPNVFNNTRNITSLNLANN 477
+ ++ N + S LD+SR +I LP N + + + + N
Sbjct: 181 LNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTYNL 235
Score = 32.6 bits (72), Expect = 0.13
Identities = 6/52 (11%), Positives = 10/52 (19%)
Query: 491 DVLLELESLDLSNNNLTHISPTVLRHNRAITSIKLVGNPWKCDCNIADMWEW 542
D+ L L I + I++ N
Sbjct: 26 DLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNL 77
Score = 29.5 bits (64), Expect = 1.3
Identities = 6/41 (14%), Positives = 10/41 (24%)
Query: 34 GAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGN 74
F A + L + + + NL L
Sbjct: 195 DVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTYNL 235
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia
pestis [TaxId: 632]}
Length = 353
Score = 51.7 bits (122), Expect = 1e-07
Identities = 55/349 (15%), Positives = 92/349 (26%), Gaps = 20/349 (5%)
Query: 161 NTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYL 220
+ W RN E ++ V+ L+L+N L L E L +L
Sbjct: 11 SEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSS-LPE----LPPHLESLVA 65
Query: 221 SGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTA 280
S N L+ +L + L L + LS LP + +L+ +F
Sbjct: 66 SCNSLT--ELPELPQSLKSLLVDNNNLKALSDLPPLLEYLGVSNNQLEKLPELQNSSFLK 123
Query: 281 LLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLE 340
++ + + ++ L L L
Sbjct: 124 IIDVDNNSLKKLPDLPPSLEFIAAGNNQLEELPELQNLPFLTAIYADNNSLKKLPDLPLS 183
Query: 341 LNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLV 400
L + E P L + N L LPD + + L
Sbjct: 184 LESIVAGNNILEELPELQNLPFLTTIYADNNLLKTLPDLPPSLEALNVRDNYLTDLPELP 243
Query: 401 ILFILNETVFHENYTYPDLEELRLSGNPLHVLPTGNLLPPQLSRLRSLDLSRCKIDYLPP 460
+ + +L N L L++S K+ LP
Sbjct: 244 QSLTFLDVSENIFSGLSELPPNLYYLNASSNEIRSL--CDLPPSLEELNVSNNKLIELPA 301
Query: 461 NVFNNTRNITSLNLANNNLSMTSELSFQFLDVLLELESLDLSNNNLTHI 509
+ L + N+L+ EL L+ L + N L
Sbjct: 302 LP----PRLERLIASFNHLAEVPEL-------PQNLKQLHVEYNPLREF 339
Score = 50.6 bits (119), Expect = 4e-07
Identities = 55/342 (16%), Positives = 94/342 (27%), Gaps = 30/342 (8%)
Query: 164 LRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGN 223
L L L ++L + HL+SL S L L E L++L + N
Sbjct: 40 AHELELNNLGL------SSLPELPPHLESLVASCNSLT-ELPE----LPQSLKSLLVDNN 88
Query: 224 PLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLS 283
L A L + L + + L +
Sbjct: 89 NLKALSDLPPLLEYLGVSNNQLEKLPELQNSSFLKIIDVDNNSLKKLPDLPPSLEFIAAG 148
Query: 284 PLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHL--SVLEL 341
+ E ++ + + L L LS + + L + L
Sbjct: 149 NNQLEELPELQNLPFLTAIYADNNSLKKLPDLPLSLESIVAGNNILEELPELQNLPFLTT 208
Query: 342 NNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVI 401
L + + T I + + + L
Sbjct: 209 IYADNNLLKTLPDLPPSLEALNVRDNYLTDLPELPQSLTFLDVSENIFSGLSELPPNLYY 268
Query: 402 LFILNETVFHENYTYPDLEELRLSGNPLHVLPTGNLLPPQLSRLRSLDLSRCKIDYLPPN 461
L + + P LEEL +S N L LP RL L S + +P
Sbjct: 269 LNASSNEIRSLCDLPPSLEELNVSNNKLIELPAL------PPRLERLIASFNHLAEVPEL 322
Query: 462 VFNNTRNITSLNLANNNLSMTSELSFQFLDVLLELESLDLSN 503
+N+ L++ N L +F D+ +E L +++
Sbjct: 323 P----QNLKQLHVEYNPLR-------EFPDIPESVEDLRMNS 353
Score = 49.8 bits (117), Expect = 6e-07
Identities = 54/322 (16%), Positives = 93/322 (28%), Gaps = 27/322 (8%)
Query: 66 LNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLK 125
++L+L+ L + + LE L+ + +LT + LK+L + N LK
Sbjct: 40 AHELELNNLGLSSLP----ELPPHLESLVASCNSLTELPEL----PQSLKSLLVDNNNLK 91
Query: 126 SHIDWT--LVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTL 183
+ D L + L + S+ + +N L+ L L +
Sbjct: 92 ALSDLPPLLEYLGVSNNQLEKLPELQNSSFLKIIDVDNNSLKKLPDLPPSLEFIAAGNNQ 151
Query: 184 GQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRL 243
+ L L +L S + ++GN + + P
Sbjct: 152 LEELPELQNLPFLTAIYADNNSLKKLPDLPLSLESIVAGNNILEELPELQNLPFLTTIYA 211
Query: 244 SLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMG------YSN 297
+ L + T L L +
Sbjct: 212 DNNLLKTLPDLPPSLEALNVRDNYLTDLPELPQSLTFLDVSENIFSGLSELPPNLYYLNA 271
Query: 298 LQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHEN 357
RS SL+ L +S NKL L + L L + L + E
Sbjct: 272 SSNEIRSLCDLPPSLEELNVSNNKLIELPAL----PPRLERLIASFNHLAEVPELP---- 323
Query: 358 YTYPDLEELRLSGNPLHVLPDS 379
+L++L + NPL PD
Sbjct: 324 ---QNLKQLHVEYNPLREFPDI 342
Score = 46.4 bits (108), Expect = 6e-06
Identities = 17/92 (18%), Positives = 31/92 (33%), Gaps = 8/92 (8%)
Query: 46 YMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISP 105
S +L +L++S N L + LE L+ + +L +
Sbjct: 266 LYYLNASSNEIRSLCDLPPSLEELNVSNNKLIELPAL----PPRLERLIASFNHLAEVPE 321
Query: 106 SAFDNLNHLKTLELSQNKLKSHIDWTLVLGNL 137
+LK L + N L+ D + +L
Sbjct: 322 L----PQNLKQLHVEYNPLREFPDIPESVEDL 349
Score = 41.7 bits (96), Expect = 2e-04
Identities = 18/99 (18%), Positives = 29/99 (29%), Gaps = 14/99 (14%)
Query: 71 LSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDW 130
N + D SLE L ++ L + L+ L S N L
Sbjct: 267 YYLNASSNEIRSLCDLPPSLEELNVSNNKLIELPAL----PPRLERLIASFNHLAE---- 318
Query: 131 TLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNL 169
V L L + + + PD + +L +
Sbjct: 319 --VPELPQNLKQLHVEYNPLREFPDIP----ESVEDLRM 351
Score = 38.7 bits (88), Expect = 0.002
Identities = 57/314 (18%), Positives = 99/314 (31%), Gaps = 38/314 (12%)
Query: 238 TKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLE-------SLEH 290
+ H L L N GLS LP L+ L S N L + L L+ +L+
Sbjct: 38 RQAHELELNNLGLSSLPEL----PPHLESLVASCNSLTE-LPELPQSLKSLLVDNNNLKA 92
Query: 291 LDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLS------------- 337
L L+ + S + S K+ +++ + L L
Sbjct: 93 LSDLPPLLEYLGVSNNQLEKLPELQNSSFLKIIDVDNNSLKKLPDLPPSLEFIAAGNNQL 152
Query: 338 --VLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKN 395
+ EL N + PDL S + + + + T I+ +
Sbjct: 153 EELPELQNLPFLTAIYADNNSLKKLPDLPLSLESIVAGNNILEELPELQNLPFLTTIYAD 212
Query: 396 FDFLVILFILNETVFHENYTYPDLEELRLSGNPLHVLPTGNLLPPQLSRLRSLDLSRCKI 455
+ L L L ++ N L +L L L + LS L
Sbjct: 213 NNLLKTLPDLPPSLEALNVRDNYLTDLPELPQSLTFLDVSENIFSGLSELPPNLYYLNAS 272
Query: 456 DYLPPNVFNNTRNITSLNLANNNLSMTSELSFQFLDVLLELESLDLSNNNLTHISPTVLR 515
++ + ++ LN++NN L + + LE L S N+L +
Sbjct: 273 SNEIRSLCDLPPSLEELNVSNNKLI-------ELPALPPRLERLIASFNHLAEVPELP-- 323
Query: 516 HNRAITSIKLVGNP 529
+ + + + NP
Sbjct: 324 --QNLKQLHVEYNP 335
Score = 34.0 bits (76), Expect = 0.049
Identities = 19/100 (19%), Positives = 34/100 (34%), Gaps = 11/100 (11%)
Query: 443 SRLRSLDLSRCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSFQFLDVLLELESLDLS 502
+ L+L+ + LP ++ SL + N+L+ EL L+SL +
Sbjct: 38 RQAHELELNNLGLSSLPELP----PHLESLVASCNSLTELPELPQS-------LKSLLVD 86
Query: 503 NNNLTHISPTVLRHNRAITSIKLVGNPWKCDCNIADMWEW 542
NNNL +S S + + +
Sbjct: 87 NNNLKALSDLPPLLEYLGVSNNQLEKLPELQNSSFLKIID 126
Score = 32.5 bits (72), Expect = 0.15
Identities = 55/366 (15%), Positives = 91/366 (24%), Gaps = 60/366 (16%)
Query: 88 TSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQ 147
L LN L+ + + HL++L S N L + +L L +
Sbjct: 38 RQAHELELNNLGLSSLP----ELPPHLESLVASCNSLTE---LPELPQSLKSLLVDNNNL 90
Query: 148 SGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSED 207
+S+LP + L + N DL +
Sbjct: 91 KALSDLPPLLEYLGVSNNQLEKLPELQNSSFLKIIDVDNNSLKKLPDLPPSLEFIAAGNN 150
Query: 208 AFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRN-------CGLSRLPANTFHR 260
+L+ L + + L L + L LP T
Sbjct: 151 QLEELPELQNLPFLTAIYADNNSLKKLPDLPLSLESIVAGNNILEELPELQNLPFLTTIY 210
Query: 261 FTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGN 320
+ P + + +S + F ++ L + N
Sbjct: 211 ADNNLLKTLPDLPPSLEALNVRDNYLTDLPELPQSLTFLDVSENIFSGLSELPPNLYYLN 270
Query: 321 KLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDST 380
L L L ++N L L P LE L S N L +P+
Sbjct: 271 ASSNEIRSLCDLPPSLEELNVSNNKLIELPALP-------PRLERLIASFNHLAEVPELP 323
Query: 381 KQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTYPDLEELRLSGNPLHVLPTGNLLPP 440
+ L++L + NPL P +P
Sbjct: 324 QN------------------------------------LKQLHVEYNPLREFPD---IPE 344
Query: 441 QLSRLR 446
+ LR
Sbjct: 345 SVEDLR 350
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo
sapiens) [TaxId: 9606]}
Length = 460
Score = 51.1 bits (120), Expect = 3e-07
Identities = 19/92 (20%), Positives = 37/92 (40%), Gaps = 9/92 (9%)
Query: 215 LRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLS----RLPANTFHRFTCLQELDIS 270
+++L + LS A + L L + + L +CGL+ + ++ L EL++
Sbjct: 4 IQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLR 63
Query: 271 HNPLIDA-----FTALLSPLESLEHLDMGYSN 297
N L D L +P ++ L +
Sbjct: 64 SNELGDVGVHCVLQGLQTPSCKIQKLSLQNCC 95
Score = 49.2 bits (115), Expect = 1e-06
Identities = 22/131 (16%), Positives = 38/131 (29%), Gaps = 7/131 (5%)
Query: 418 DLEELRLSGNPLHVLPTGNLLPPQLSRLRSLDLSRCKIDYLP----PNVFNNTRNITSLN 473
D++ L + L LLP L + + + L C + + + LN
Sbjct: 3 DIQSLDIQCEELSDARWAELLP-LLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELN 61
Query: 474 LANNNLSMT--SELSFQFLDVLLELESLDLSNNNLTHISPTVLRHNRAITSIKLVGNPWK 531
L +N L + +++ L L N LT VL +
Sbjct: 62 LRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSD 121
Query: 532 CDCNIADMWEW 542
A +
Sbjct: 122 NLLGDAGLQLL 132
Score = 48.0 bits (112), Expect = 2e-06
Identities = 23/92 (25%), Positives = 33/92 (35%), Gaps = 10/92 (10%)
Query: 264 LQELDISHNPLIDA-FTALLSPLESLEHLDMGYSNLQRIS----RSTFLKMTSLKTLILS 318
+Q LDI L DA + LL L+ + + + L S +L L L
Sbjct: 4 IQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLR 63
Query: 319 GNKL-----ETLESGLFQNLTHLSVLELNNCG 345
N+L + GL + L L NC
Sbjct: 64 SNELGDVGVHCVLQGLQTPSCKIQKLSLQNCC 95
Score = 45.7 bits (106), Expect = 1e-05
Identities = 25/93 (26%), Positives = 38/93 (40%), Gaps = 8/93 (8%)
Query: 164 LRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSED---AFVNATKLRTLYL 220
+++L++ EL D A L L + L +C L +D A L L L
Sbjct: 4 IQSLDIQCEELSDARWAE-LLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNL 62
Query: 221 SGNPLS---AADLSVALK-PLTKLHRLSLRNCG 249
N L + L+ P K+ +LSL+NC
Sbjct: 63 RSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCC 95
Score = 45.7 bits (106), Expect = 1e-05
Identities = 24/97 (24%), Positives = 40/97 (41%), Gaps = 9/97 (9%)
Query: 110 NLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLP----DNVFANNTWLR 165
+L+ +++L++ +L S W +L L + + L G++ + N L
Sbjct: 1 SLD-IQSLDIQCEEL-SDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALA 58
Query: 166 NLNLAENELIDLDV---ATTLGQNLVHLDSLDLSNCH 199
LNL NEL D+ V L + L L NC
Sbjct: 59 ELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCC 95
Score = 43.4 bits (100), Expect = 7e-05
Identities = 17/93 (18%), Positives = 35/93 (37%), Gaps = 8/93 (8%)
Query: 188 VHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLS---AADLSVALKPLTKLHRLS 244
+ + SLD+ L + + + + L L+ D+S AL+ L L+
Sbjct: 2 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELN 61
Query: 245 LRNC-----GLSRLPANTFHRFTCLQELDISHN 272
LR+ G+ + +Q+L + +
Sbjct: 62 LRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNC 94
Score = 41.9 bits (96), Expect = 2e-04
Identities = 18/109 (16%), Positives = 32/109 (29%), Gaps = 26/109 (23%)
Query: 66 LNKLDLSGNPLRIIE-PGVFDPLTSLEYLMLNRCNLTYIS----PSAFDNLNHLKTLELS 120
+ LD+ L + L + + L+ C LT SA L L L
Sbjct: 4 IQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLR 63
Query: 121 QNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNL 169
N+L G+ + + + ++ L+L
Sbjct: 64 SNELGD---------------------VGVHCVLQGLQTPSCKIQKLSL 91
Score = 41.5 bits (95), Expect = 3e-04
Identities = 18/74 (24%), Positives = 27/74 (36%), Gaps = 7/74 (9%)
Query: 185 QNLVHLDSLDLSNCHLKGPLSE---DAFVNATKLRTLYLSGNPLS---AADLSVALK-PL 237
Q L L L++C + + LR L LS N L L +++ P
Sbjct: 366 QPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPG 425
Query: 238 TKLHRLSLRNCGLS 251
L +L L + S
Sbjct: 426 CLLEQLVLYDIYWS 439
Score = 41.5 bits (95), Expect = 3e-04
Identities = 17/79 (21%), Positives = 27/79 (34%), Gaps = 6/79 (7%)
Query: 443 SRLRSLDLSRCKIDYLP----PNVFNNTRNITSLNLANNNLSMT--SELSFQFLDVLLEL 496
S LR L L+ C + ++ L+L+NN L +L L
Sbjct: 369 SVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLL 428
Query: 497 ESLDLSNNNLTHISPTVLR 515
E L L + + L+
Sbjct: 429 EQLVLYDIYWSEEMEDRLQ 447
Score = 40.0 bits (91), Expect = 0.001
Identities = 18/86 (20%), Positives = 31/86 (36%), Gaps = 8/86 (9%)
Query: 209 FVNATKLRTLYLSGNPLS---AADLSVALKPLTKLHRLSLRNC-----GLSRLPANTFHR 260
+ LR L+L+ +S + L+ L L L L N G+ +L +
Sbjct: 365 GQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQP 424
Query: 261 FTCLQELDISHNPLIDAFTALLSPLE 286
L++L + + L LE
Sbjct: 425 GCLLEQLVLYDIYWSEEMEDRLQALE 450
Score = 39.2 bits (89), Expect = 0.001
Identities = 20/106 (18%), Positives = 37/106 (34%), Gaps = 13/106 (12%)
Query: 247 NCGLSRLPANTFHRFTCLQELDISHNPLID----AFTALLSPLESLEHLDMGYSNL---- 298
+ G+ L + L+ L ++ + D + A L SL LD+ + L
Sbjct: 354 DAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAG 413
Query: 299 -QRISRSTFLKMTSLKTLILSGNKL----ETLESGLFQNLTHLSVL 339
++ S L+ L+L E L ++ L V+
Sbjct: 414 ILQLVESVRQPGCLLEQLVLYDIYWSEEMEDRLQALEKDKPSLRVI 459
Score = 37.3 bits (84), Expect = 0.005
Identities = 20/98 (20%), Positives = 33/98 (33%), Gaps = 13/98 (13%)
Query: 33 EGAFLVARSLLYLYMQECTLSKIN----PQFFTNLTTLNKLDLSGNPL-----RIIEPGV 83
+G L L++ +C +S + +L +LDLS N L + V
Sbjct: 362 QGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESV 421
Query: 84 FDPLTSLEYLMLNRCNLTYISPSAFDNL----NHLKTL 117
P LE L+L + L L+ +
Sbjct: 422 RQPGCLLEQLVLYDIYWSEEMEDRLQALEKDKPSLRVI 459
Score = 37.3 bits (84), Expect = 0.006
Identities = 17/65 (26%), Positives = 26/65 (40%), Gaps = 2/65 (3%)
Query: 311 SLKTLILSGNKLETLE-SGLFQNLTHLSVLELNNCGLTRLNETVFHEN-YTYPDLEELRL 368
+++L + +L + L L V+ L++CGLT P L EL L
Sbjct: 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNL 62
Query: 369 SGNPL 373
N L
Sbjct: 63 RSNEL 67
Score = 37.3 bits (84), Expect = 0.006
Identities = 29/107 (27%), Positives = 38/107 (35%), Gaps = 11/107 (10%)
Query: 148 SGISNLPDNVFANNTWLRNLNLAENELID---LDVATTLGQNLVHLDSLDLSNCHLKGP- 203
+G+ L + + LR L LA+ ++ D +A TL N L LDLSN L
Sbjct: 355 AGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLAN-HSLRELDLSNNCLGDAG 413
Query: 204 ---LSEDAFVNATKLRTLYLSGNPLS---AADLSVALKPLTKLHRLS 244
L E L L L S L K L +S
Sbjct: 414 ILQLVESVRQPGCLLEQLVLYDIYWSEEMEDRLQALEKDKPSLRVIS 460
Score = 36.1 bits (81), Expect = 0.012
Identities = 23/119 (19%), Positives = 40/119 (33%), Gaps = 27/119 (22%)
Query: 81 PGVFDPLTSLEYLMLNRCNLTYIS----PSAFDNLNHLKTLELSQNKLKSHIDWTLVLGN 136
G+ P + L L L C+++ S + + L+ L+LS N
Sbjct: 362 QGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNC------------- 408
Query: 137 LGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELID--LDVATTLGQNLVHLDSL 193
L +GI L ++V L L L + + D L ++ L +
Sbjct: 409 --------LGDAGILQLVESVRQPGCLLEQLVLYDIYWSEEMEDRLQALEKDKPSLRVI 459
Score = 35.0 bits (78), Expect = 0.034
Identities = 18/74 (24%), Positives = 28/74 (37%), Gaps = 6/74 (8%)
Query: 463 FNNTRNITSLNLANNNLSMTSELSF-QFLDVLLELESLDLSNNNLT-----HISPTVLRH 516
+ L LA+ ++S +S S L L LDLSNN L + +V +
Sbjct: 365 GQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQP 424
Query: 517 NRAITSIKLVGNPW 530
+ + L W
Sbjct: 425 GCLLEQLVLYDIYW 438
Score = 33.8 bits (75), Expect = 0.069
Identities = 14/92 (15%), Positives = 33/92 (35%), Gaps = 11/92 (11%)
Query: 19 LITINLNANPIQPVEGAFLVA--RSLLYLYMQECTLSKIN----PQFFTNLTTLNKLDLS 72
+ ++++ + A L+ + + + +C L++ L +L+L
Sbjct: 4 IQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLR 63
Query: 73 GNPL-----RIIEPGVFDPLTSLEYLMLNRCN 99
N L + G+ P ++ L L C
Sbjct: 64 SNELGDVGVHCVLQGLQTPSCKIQKLSLQNCC 95
Score = 33.4 bits (74), Expect = 0.082
Identities = 17/81 (20%), Positives = 28/81 (34%), Gaps = 7/81 (8%)
Query: 127 HIDWTLVLGNLGKLDTLDLRQSGISNLPD----NVFANNTWLRNLNLAENELID---LDV 179
+ L L L +S+ N LR L+L+ N L D L +
Sbjct: 358 RELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQL 417
Query: 180 ATTLGQNLVHLDSLDLSNCHL 200
++ Q L+ L L + +
Sbjct: 418 VESVRQPGCLLEQLVLYDIYW 438
Score = 33.0 bits (73), Expect = 0.13
Identities = 10/69 (14%), Positives = 21/69 (30%), Gaps = 7/69 (10%)
Query: 417 PDLEELRLSGNPLHVLPTGNLLP--PQLSRLRSLDLSRCKID-----YLPPNVFNNTRNI 469
+ +RL L ++ L L+L ++ + + + I
Sbjct: 27 QQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKI 86
Query: 470 TSLNLANNN 478
L+L N
Sbjct: 87 QKLSLQNCC 95
Score = 28.0 bits (60), Expect = 3.9
Identities = 7/36 (19%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 494 LELESLDLSNNNLTHIS-PTVLRHNRAITSIKLVGN 528
L+++SLD+ L+ +L + ++L
Sbjct: 2 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDC 37
Score = 27.2 bits (58), Expect = 8.6
Identities = 14/70 (20%), Positives = 21/70 (30%), Gaps = 9/70 (12%)
Query: 417 PDLEELRLSGNPL---HVLPTGNLLPPQLSRLRSLDLSRCKIDYLPPNVFNNTRNITSLN 473
L EL LS N L +L + L L L + + +L
Sbjct: 397 HSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWSEEMEDR------LQALE 450
Query: 474 LANNNLSMTS 483
+L + S
Sbjct: 451 KDKPSLRVIS 460
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes
[TaxId: 1639]}
Length = 227
Score = 49.6 bits (117), Expect = 3e-07
Identities = 44/220 (20%), Positives = 73/220 (33%), Gaps = 12/220 (5%)
Query: 285 LESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNC 344
L + + G SN+ T + + TL G + T+E Q L +L LEL +
Sbjct: 18 LANAIKIAAGKSNV--TDTVTQADLDGITTLSAFGTGVTTIEG--VQYLNNLIGLELKDN 73
Query: 345 GLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFI 404
+T L T +L L S K + + L L +
Sbjct: 74 QITDLAPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQV 133
Query: 405 LNETVFHENYTYP-DLEELRLSGNPLHVLPTGNLLPPQLSRLRSLDLSRCKIDYLPPNVF 463
L + P + + + LS+L +L KI + P
Sbjct: 134 LYLDLNQITNISPLAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDISP--L 191
Query: 464 NNTRNITSLNLANNNLSMTSELSFQFLDVLLELESLDLSN 503
+ N+ ++L NN +S S L+ L + L+N
Sbjct: 192 ASLPNLIEVHLKNNQISDVSPLAN-----TSNLFIVTLTN 226
Score = 43.5 bits (101), Expect = 4e-05
Identities = 37/235 (15%), Positives = 79/235 (33%), Gaps = 24/235 (10%)
Query: 109 DNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLN 168
L + + ++ + T+ +L + TL +G++ + L L
Sbjct: 16 PALANAIKIAAGKSNVTD----TVTQADLDGITTLSAFGTGVTTIEG--VQYLNNLIGLE 69
Query: 169 LAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAA 228
L +N++ DL L + + A ++TL L+ ++
Sbjct: 70 LKDNQITDLAPLKNLTKITEL-------ELSGNPLKNVSAIAGLQSIKTLDLTSTQITDV 122
Query: 229 DLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESL 288
L L L+ + +S L T ++ + +S L+ L L
Sbjct: 123 TPLAGLSNLQVLYLDLNQITNISPLAGLTNLQYLSIGNAQVSDLTP-------LANLSKL 175
Query: 289 EHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNN 343
L + + IS + +L + L N++ + N ++L ++ L N
Sbjct: 176 TTLKADDNKISDIS--PLASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTN 226
Score = 42.7 bits (99), Expect = 7e-05
Identities = 34/203 (16%), Positives = 62/203 (30%), Gaps = 14/203 (6%)
Query: 313 KTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNP 372
+ ++ K ++ +L ++ L G+T + + N L L L N
Sbjct: 20 NAIKIAAGKSNVTDTVTQADLDGITTLSAFGTGVTTIEGVQYLNN-----LIGLELKDNQ 74
Query: 373 LHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTYPDLEELRLSGNPLHVL 432
+ L + + + I + + T + L VL
Sbjct: 75 ITDLAPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVL 134
Query: 433 PTGNLLPPQLSRLRSLDL----SRCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSFQ 488
+S L L S N +T+L +N +S S L+
Sbjct: 135 YLDLNQITNISPLAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDISPLAS- 193
Query: 489 FLDVLLELESLDLSNNNLTHISP 511
L L + L NN ++ +SP
Sbjct: 194 ----LPNLIEVHLKNNQISDVSP 212
Score = 38.9 bits (89), Expect = 0.001
Identities = 30/232 (12%), Positives = 63/232 (27%), Gaps = 24/232 (10%)
Query: 62 NLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQ 121
L K+ + + + L + L +T I LN+L LEL
Sbjct: 17 ALANAIKIAAGKS--NVTDTVTQADLDGITTLSAFGTGVTTIEG--VQYLNNLIGLELKD 72
Query: 122 NKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVAT 181
N++ + + + ++ + L L
Sbjct: 73 NQITDLAPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQ 132
Query: 182 TLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLH 241
L +L + ++ + L L L+KL
Sbjct: 133 VLYLDLNQITNISPLAGLTNLQYLSIGNAQVSDLTPL----------------ANLSKLT 176
Query: 242 RLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDM 293
L + +S + L E+ + +N + D + L+ +L + +
Sbjct: 177 TLKADDNKISDISP--LASLPNLIEVHLKNNQISD--VSPLANTSNLFIVTL 224
Score = 38.1 bits (87), Expect = 0.002
Identities = 36/212 (16%), Positives = 60/212 (28%), Gaps = 22/212 (10%)
Query: 60 FTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLEL 119
+L + L G + IE L +L L L +T ++P L
Sbjct: 37 QADLDGITTLSAFGTGVTTIEG--VQYLNNLIGLELKDNQITDLAPLKNLTKITELELSG 94
Query: 120 SQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDV 179
+ K S I QS + + + L
Sbjct: 95 NPLKNVSAIAG---------------LQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDLN 139
Query: 180 ATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTK 239
T L L +L + N +KL TL N +S L L
Sbjct: 140 QITNISPLAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDIS---PLASLPN 196
Query: 240 LHRLSLRNCGLSRLPANTFHRFTCLQELDISH 271
L + L+N +S + + L + +++
Sbjct: 197 LIEVHLKNNQISDVSP--LANTSNLFIVTLTN 226
Score = 37.7 bits (86), Expect = 0.002
Identities = 16/75 (21%), Positives = 29/75 (38%), Gaps = 4/75 (5%)
Query: 46 YMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISP 105
Y+ + NL+ L L N + I P L +L + L ++ +SP
Sbjct: 155 YLSIGNAQVSDLTPLANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP 212
Query: 106 SAFDNLNHLKTLELS 120
N ++L + L+
Sbjct: 213 --LANTSNLFIVTLT 225
Score = 33.5 bits (75), Expect = 0.065
Identities = 12/103 (11%), Positives = 30/103 (29%), Gaps = 7/103 (6%)
Query: 440 PQLSRLRSLDLSRCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSFQFLDVLLELESL 499
P L+ + + + + IT+L+ ++ + + L L L
Sbjct: 16 PALANAIKIAAGKSNVTDTVT--QADLDGITTLSAFGTGVTTIEGVQY-----LNNLIGL 68
Query: 500 DLSNNNLTHISPTVLRHNRAITSIKLVGNPWKCDCNIADMWEW 542
+L +N +T ++P + +
Sbjct: 69 ELKDNQITDLAPLKNLTKITELELSGNPLKNVSAIAGLQSIKT 111
Score = 31.9 bits (71), Expect = 0.18
Identities = 12/56 (21%), Positives = 23/56 (41%), Gaps = 4/56 (7%)
Query: 41 SLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLN 96
L L + +S I+P +L L ++ L N + + P ++L + L
Sbjct: 174 KLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLT 225
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase
alpha-subunit, C-terminal domain {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 124
Score = 43.2 bits (101), Expect = 1e-05
Identities = 27/125 (21%), Positives = 47/125 (37%), Gaps = 6/125 (4%)
Query: 243 LSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRIS 302
L L + L+ L + + LD+SHN L AL + L LE L + L+ +
Sbjct: 3 LHLAHKDLTVLCH--LEQLLLVTHLDLSHNRLRALPPAL-AALRCLEVLQASDNALENVD 59
Query: 303 RSTFLKMTSLKTLILSGNKLETLES-GLFQNLTHLSVLELNNCGLTRLNETVFHENYTYP 361
+ L+ L+L N+L+ + + L +L L L + P
Sbjct: 60 --GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLP 117
Query: 362 DLEEL 366
+ +
Sbjct: 118 SVSSI 122
Score = 40.5 bits (94), Expect = 1e-04
Identities = 23/113 (20%), Positives = 39/113 (34%), Gaps = 8/113 (7%)
Query: 142 TLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLK 201
L L ++ L + +L+L+ N L L L L L++
Sbjct: 2 VLHLAHKDLTVLCH--LEQLLLVTHLDLSHNRL------RALPPALAALRCLEVLQASDN 53
Query: 202 GPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLP 254
+ D N +L+ L L N L + L +L L+L+ L +
Sbjct: 54 ALENVDGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEE 106
Score = 38.9 bits (90), Expect = 3e-04
Identities = 26/135 (19%), Positives = 41/135 (30%), Gaps = 33/135 (24%)
Query: 92 YLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGIS 151
L L +LT + L + L+LS N+L++ L L L+ L + +
Sbjct: 2 VLHLAHKDLT--VLCHLEQLLLVTHLDLSHNRLRALPPA---LAALRCLEVLQASDNALE 56
Query: 152 NLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVN 211
N+ L L N L+ + V+
Sbjct: 57 NVDGVANLPRLQ----------------------------ELLLCNNRLQQSAAIQPLVS 88
Query: 212 ATKLRTLYLSGNPLS 226
+L L L GN L
Sbjct: 89 CPRLVLLNLQGNSLC 103
Score = 37.0 bits (85), Expect = 0.001
Identities = 27/127 (21%), Positives = 48/127 (37%), Gaps = 9/127 (7%)
Query: 44 YLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYI 103
L++ L+ + L + LDLS N LR + P L LE L + L +
Sbjct: 2 VLHLAHKDLTVLCH--LEQLLLVTHLDLSHNRLRALPPA-LAALRCLEVLQASDNALENV 58
Query: 104 SPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQ---SGISNLPDNVFAN 160
NL L+ L L N+L+ L + +L L+L+ + + +
Sbjct: 59 DG--VANLPRLQELLLCNNRLQQSAAIQ-PLVSCPRLVLLNLQGNSLCQEEGIQERLAEM 115
Query: 161 NTWLRNL 167
+ ++
Sbjct: 116 LPSVSSI 122
Score = 35.5 bits (81), Expect = 0.005
Identities = 30/128 (23%), Positives = 50/128 (39%), Gaps = 10/128 (7%)
Query: 216 RTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLI 275
R L+L+ L+ L+ L + L L + L CL+ L S N L
Sbjct: 1 RVLHLAHKDLTVLC---HLEQLLLVTHLDLSHNRLRA-LPPALAALRCLEVLQASDNALE 56
Query: 276 DAFTALLSPLESLEHLDMGYSNLQRISR-STFLKMTSLKTLILSGNKL---ETLESGLFQ 331
+ + L L+ L + + LQ+ + + L L L GN L E ++ L +
Sbjct: 57 NVDGV--ANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAE 114
Query: 332 NLTHLSVL 339
L +S +
Sbjct: 115 MLPSVSSI 122
Score = 35.5 bits (81), Expect = 0.006
Identities = 24/99 (24%), Positives = 34/99 (34%), Gaps = 7/99 (7%)
Query: 417 PDLEELRLSGNPLHVLPTGNLLPPQLSRLRSLDLSRCKIDYLPPNVFNNTRNITSLNLAN 476
+ L LS N L LP L L L S ++ + + L L N
Sbjct: 20 LLVTHLDLSHNRLRALPPA---LAALRCLEVLQASDNALENVDGVANLP--RLQELLLCN 74
Query: 477 NNLSMTSELSFQFLDVLLELESLDLSNNNLTHISPTVLR 515
N L ++ + Q L L L+L N+L R
Sbjct: 75 NRLQQSAAI--QPLVSCPRLVLLNLQGNSLCQEEGIQER 111
Score = 30.1 bits (67), Expect = 0.34
Identities = 22/111 (19%), Positives = 34/111 (30%), Gaps = 23/111 (20%)
Query: 446 RSLDLSRCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSFQFLDVLLEL--------- 496
R L L+ + L +T L+L++N L + L L L
Sbjct: 1 RVLHLAHKDLTVLCH--LEQLLLVTHLDLSHNRLRALPP-ALAALRCLEVLQASDNALEN 57
Query: 497 ----------ESLDLSNNNLTHIS-PTVLRHNRAITSIKLVGNPWKCDCNI 536
+ L L NN L + L + + L GN + I
Sbjct: 58 VDGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGI 108
Score = 29.3 bits (65), Expect = 0.68
Identities = 9/55 (16%), Positives = 21/55 (38%), Gaps = 1/55 (1%)
Query: 446 RSLDLSRCKIDYLP-PNVFNNTRNITSLNLANNNLSMTSELSFQFLDVLLELESL 499
+ L L ++ + + LNL N+L + + ++L + S+
Sbjct: 68 QELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSI 122
Score = 29.3 bits (65), Expect = 0.70
Identities = 17/124 (13%), Positives = 34/124 (27%), Gaps = 21/124 (16%)
Query: 313 KTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNP 372
+ L L+ L L + L ++ L+L++ L L +
Sbjct: 1 RVLHLAHKDLTVLCH--LEQLLLVTHLDLSHNRLRALPPAL----------------AAL 42
Query: 373 LHVLPDSTKQYSMRTIPTQIWKNFDFLVILF---ILNETVFHENYTYPDLEELRLSGNPL 429
+ ++ + ++L + + P L L L GN L
Sbjct: 43 RCLEVLQASDNALENVDGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSL 102
Query: 430 HVLP 433
Sbjct: 103 CQEE 106
Score = 27.4 bits (60), Expect = 3.0
Identities = 12/55 (21%), Positives = 21/55 (38%), Gaps = 4/55 (7%)
Query: 44 YLYMQECTLSKI-NPQFFTNLTTLNKLDLSGNPLRIIE---PGVFDPLTSLEYLM 94
L + L + Q + L L+L GN L E + + L S+ ++
Sbjct: 69 ELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSIL 123
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo
sapiens) [TaxId: 9606]}
Length = 162
Score = 43.7 bits (102), Expect = 1e-05
Identities = 21/122 (17%), Positives = 37/122 (30%), Gaps = 3/122 (2%)
Query: 57 PQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKT 116
+ ++ L LR L + +N+ L +
Sbjct: 13 KLIMSKRYDGSQQALDLKGLRSDP--DLVAQNIDVVLNRRSSMAATL-RIIEENIPELLS 69
Query: 117 LELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELID 176
L LS N+L D + ++ L L+L + + + + L L L N L D
Sbjct: 70 LNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSD 129
Query: 177 LD 178
Sbjct: 130 TF 131
Score = 41.0 bits (95), Expect = 1e-04
Identities = 34/122 (27%), Positives = 47/122 (38%), Gaps = 6/122 (4%)
Query: 105 PSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWL 164
L L+S D L L+ R S + L + N L
Sbjct: 13 KLIMSKRYDGSQQALDLKGLRSDPD----LVAQNIDVVLNRRSSMAATLR-IIEENIPEL 67
Query: 165 RNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNP 224
+LNL+ N L LD +++ Q +L L+LS LK E + KL L+L GN
Sbjct: 68 LSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELK-SERELDKIKGLKLEELWLDGNS 126
Query: 225 LS 226
LS
Sbjct: 127 LS 128
Score = 38.3 bits (88), Expect = 9e-04
Identities = 24/117 (20%), Positives = 38/117 (32%), Gaps = 6/117 (5%)
Query: 418 DLEELRLSGNPLHVLPTGNLLPPQLSRLRSLDLSRCKIDYLPPNVFNNTRNITSLNLANN 477
D + L L P +L+ + L+ + N + SLNL+NN
Sbjct: 21 DGSQQALDLKGLRSDP--DLV--AQNIDVVLNRRSSMAA-TLRIIEENIPELLSLNLSNN 75
Query: 478 NLSMTSELSFQFLDVLLELESLDLSNNNLTHISPTVLRHNRAITSIKLVGNPWKCDC 534
L ++S L+ L+LS N L + + L GN
Sbjct: 76 RLYRLDDMSSIVQK-APNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDTF 131
Score = 37.9 bits (87), Expect = 0.001
Identities = 30/143 (20%), Positives = 47/143 (32%), Gaps = 15/143 (10%)
Query: 362 DLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTYPDLEE 421
D + L L PD Q L + T+ P+L
Sbjct: 21 DGSQQALDLKGLRSDPDLVAQ-----------NIDVVLNRRSSMAATLRIIEENIPELLS 69
Query: 422 LRLSGNPLHVLPTGNLLPPQLSRLRSLDLSRCKIDYLPPNVFNNTRNITSLNLANNNLSM 481
L LS N L+ L + + + L+ L+LS ++ + L L N+LS
Sbjct: 70 LNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSD 129
Query: 482 TSELSFQFLDVLLE----LESLD 500
T ++ + E L LD
Sbjct: 130 TFRDQSTYISAIRERFPKLLRLD 152
Score = 36.7 bits (84), Expect = 0.003
Identities = 30/122 (24%), Positives = 43/122 (35%), Gaps = 10/122 (8%)
Query: 264 LQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLE 323
Q LD+ L L+ S++ R + L +L LS N+L
Sbjct: 24 QQALDLKGLRSDPD----LVAQNIDVVLNRR-SSMAATLRIIEENIPELLSLNLSNNRLY 78
Query: 324 TLE--SGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTK 381
L+ S + Q +L +L L+ L E + LEEL L GN L
Sbjct: 79 RLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKG---LKLEELWLDGNSLSDTFRDQS 135
Query: 382 QY 383
Y
Sbjct: 136 TY 137
Score = 34.8 bits (79), Expect = 0.013
Identities = 20/105 (19%), Positives = 42/105 (40%), Gaps = 3/105 (2%)
Query: 234 LKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPL--IDAFTALLSPLESLEHL 291
L L+ R+ + L L L++S+N L +D ++++ +L+ L
Sbjct: 38 LVAQNIDVVLNRRSSMAATLR-IIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKIL 96
Query: 292 DMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHL 336
++ + L+ +K L+ L L GN L ++ +
Sbjct: 97 NLSGNELKSERELDKIKGLKLEELWLDGNSLSDTFRDQSTYISAI 141
Score = 32.5 bits (73), Expect = 0.079
Identities = 18/101 (17%), Positives = 38/101 (37%), Gaps = 1/101 (0%)
Query: 285 LESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNC 344
+ +L+ + L ++ ++ + + + +N+ L L L+N
Sbjct: 16 MSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNRRSSMAATLRIIEENIPELLSLNLSNN 75
Query: 345 GLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQYSM 385
L R + + P+L+ L LSGN L + K +
Sbjct: 76 RLYR-LDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGL 115
Score = 32.5 bits (73), Expect = 0.082
Identities = 17/98 (17%), Positives = 34/98 (34%), Gaps = 2/98 (2%)
Query: 19 LITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKIN--PQFFTNLTTLNKLDLSGNPL 76
+ +N ++ + LL L + L +++ L L+LSGN L
Sbjct: 44 DVVLNRRSSMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNEL 103
Query: 77 RIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHL 114
+ LE L L+ +L+ ++ +
Sbjct: 104 KSERELDKIKGLKLEELWLDGNSLSDTFRDQSTYISAI 141
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes
[TaxId: 1639]}
Length = 210
Score = 44.6 bits (104), Expect = 1e-05
Identities = 32/196 (16%), Positives = 66/196 (33%), Gaps = 13/196 (6%)
Query: 285 LESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNC 344
++ ++ L S+ +I + + +++++ Q L +++ L LN
Sbjct: 23 FAETIKDNLKKKSVTDAVTQNEL--NSIDQIIANNSDIKSVQG--IQYLPNVTKLFLNGN 78
Query: 345 GLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFI 404
LT + N L + K+ ++ + + LV L
Sbjct: 79 KLT---DIKPLANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHNGISDINGLVHLPQ 135
Query: 405 LNETVFHENYTYPDLEELRLSGNPLHVLPTGNL--LPP--QLSRLRSLDLSRCKIDYLPP 460
L N RL+ L + + P L++L++L LS+ I L
Sbjct: 136 LESLYLGNNKITDITVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISDLRA 195
Query: 461 NVFNNTRNITSLNLAN 476
+N+ L L +
Sbjct: 196 --LAGLKNLDVLELFS 209
Score = 43.1 bits (100), Expect = 4e-05
Identities = 39/203 (19%), Positives = 63/203 (31%), Gaps = 25/203 (12%)
Query: 154 PDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNAT 213
D+ FA NL + + D L +D + +N +K S
Sbjct: 19 SDDAFAE---TIKDNLKKKSVTDA----VTQNELNSIDQIIANNSDIK---SVQGIQYLP 68
Query: 214 KLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFT----------- 262
+ L+L+GN L+ LK L L + LS L +
Sbjct: 69 NVTKLFLNGNKLTDIKPLANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHNGISDIN 128
Query: 263 --CLQELDISHNPLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGN 320
S + T + + + + Q +T L+ L LS N
Sbjct: 129 GLVHLPQLESLYLGNNKITDITVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKN 188
Query: 321 KLETLESGLFQNLTHLSVLELNN 343
+ L + L +L VLEL +
Sbjct: 189 HISDLRA--LAGLKNLDVLELFS 209
Score = 40.4 bits (93), Expect = 3e-04
Identities = 39/187 (20%), Positives = 64/187 (34%), Gaps = 20/187 (10%)
Query: 61 TNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELS 120
L +++++ + + ++ ++ L ++ L LN LT I P NL +L L L
Sbjct: 43 NELNSIDQIIANNSDIKSVQG--IQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLD 98
Query: 121 QNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVA 180
+NK+K + + + + N L L
Sbjct: 99 ENKVKDLSSLKDLKKLKSLSLEHNGISDINGLVHLPQLESLYLGNNKITDITVLSRLTKL 158
Query: 181 TTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKL 240
TL + + TKL+ LYLS N +S DL AL L L
Sbjct: 159 DTLSLEDNQISDIV-------------PLAGLTKLQNLYLSKNHIS--DLR-ALAGLKNL 202
Query: 241 HRLSLRN 247
L L +
Sbjct: 203 DVLELFS 209
Score = 33.4 bits (75), Expect = 0.060
Identities = 35/210 (16%), Positives = 61/210 (29%), Gaps = 22/210 (10%)
Query: 61 TNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELS 120
K +L + + + L S++ ++ N ++ + L ++ L L+
Sbjct: 21 DAFAETIKDNLKKK--SVTDAVTQNELNSIDQIIANNSDIKSVQG--IQYLPNVTKLFLN 76
Query: 121 QNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVA 180
NKL L L L + + D + E+ I
Sbjct: 77 GNKLTDIK-------PLANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHNGI----- 124
Query: 181 TTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKL 240
++ L L G ++L L + V L LTKL
Sbjct: 125 ----SDINGLVHLPQLESLYLGNNKITDITVLSRLTKLDTLSLEDNQISDIVPLAGLTKL 180
Query: 241 HRLSLRNCGLSRLPANTFHRFTCLQELDIS 270
L L +S L A L L++
Sbjct: 181 QNLYLSKNHISDLRA--LAGLKNLDVLELF 208
Score = 31.9 bits (71), Expect = 0.17
Identities = 31/182 (17%), Positives = 59/182 (32%), Gaps = 19/182 (10%)
Query: 41 SLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNL 100
S+ + + + L + KL L+GN L PL +L+ L +
Sbjct: 47 SIDQIIANNSDIKSVQG--IQYLPNVTKLFLNGNKLTD-----IKPLANLKNLGWLFLDE 99
Query: 101 TYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFAN 160
+ + ++ S I+ + L L L + + + I+ L +
Sbjct: 100 NKVKDLSSLKDLKKLKSLSLEHNGISDINGLVHLPQLESLYLGNNKITDITVLSRLTKLD 159
Query: 161 NTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYL 220
L + + ++++ L L L +L LS H+ A L L L
Sbjct: 160 TLSLEDNQI--SDIVPL-------AGLTKLQNLYLSKNHISDL---RALAGLKNLDVLEL 207
Query: 221 SG 222
Sbjct: 208 FS 209
Score = 31.5 bits (70), Expect = 0.25
Identities = 29/196 (14%), Positives = 61/196 (31%), Gaps = 20/196 (10%)
Query: 136 NLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDL 195
+ +L++ +++ N+ + + +++ + Q L ++ L L
Sbjct: 22 AFAETIKDNLKKKSVTDAVTQNELNS--IDQIIANNSDIKSVQGI----QYLPNVTKLFL 75
Query: 196 SNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPA 255
+ L N L LS+ LK L+ H GL LP
Sbjct: 76 NGNKLTDIKPLANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHNGISDINGLVHLPQ 135
Query: 256 NTFHRFTCLQELDISHNPLIDAFTAL------------LSPLESLEHLDMGYSNLQRISR 303
+ DI+ + L L+ L L++L + +++ +
Sbjct: 136 LESLYLGNNKITDITVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISDL-- 193
Query: 304 STFLKMTSLKTLILSG 319
+ +L L L
Sbjct: 194 RALAGLKNLDVLELFS 209
Score = 31.1 bits (69), Expect = 0.28
Identities = 14/111 (12%), Positives = 30/111 (27%), Gaps = 8/111 (7%)
Query: 433 PTGNLLP-PQLSRLRSLDLSRCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSFQFLD 491
P + + +L + + N +I + N+++ + +
Sbjct: 13 PIKQIFSDDAFAETIKDNLKKKSVTDAVTQ--NELNSIDQIIANNSDIKSVQGIQY---- 66
Query: 492 VLLELESLDLSNNNLTHISPTVLRHNRAITSIKLVGNPWKCDCNIADMWEW 542
L + L L+ N LT I P N + +
Sbjct: 67 -LPNVTKLFLNGNKLTDIKPLANLKNLGWLFLDENKVKDLSSLKDLKKLKS 116
Score = 28.4 bits (62), Expect = 2.4
Identities = 35/200 (17%), Positives = 63/200 (31%), Gaps = 28/200 (14%)
Query: 109 DNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLN 168
D L + + + L +D + S I ++ + L
Sbjct: 21 DAFAETIKDNLKKKSVTDAVT----QNELNSIDQIIANNSDIKSVQG--IQYLPNVTKLF 74
Query: 169 LAENELIDLDVATTLGQNLV---------------HLDSLDLSNCHLKGPLSEDAFVNAT 213
L N+L D+ L L L + G + V+
Sbjct: 75 LNGNKLTDIKPLANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHNGISDINGLVHLP 134
Query: 214 KLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNP 273
+L +LYL N ++ + L L L + + T LQ L +S N
Sbjct: 135 QLESLYLGNNKITDITVLSRLTKLDTLSLEDNQISDIV-----PLAGLTKLQNLYLSKNH 189
Query: 274 LIDAFTALLSPLESLEHLDM 293
+ D L+ L++L+ L++
Sbjct: 190 ISDLRA--LAGLKNLDVLEL 207
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP
{Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Length = 313
Score = 42.4 bits (98), Expect = 1e-04
Identities = 46/265 (17%), Positives = 79/265 (29%), Gaps = 11/265 (4%)
Query: 61 TNLTTLNKLDLSGNPLRIIE--PGVFDPLTSLEYLMLNRC-NLTYISPSAFDNLNHLKTL 117
T +N LDLSG L P L L +L + NL P A L L L
Sbjct: 47 TQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYL 106
Query: 118 ELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDL 177
++ + I L + L TLD + +S ++ L + N +
Sbjct: 107 YITHTNVSGAIPDFLS--QIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRIS-- 162
Query: 178 DVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAADLSVALKPL 237
+ + L S + L+ L ++ + + L
Sbjct: 163 ---GAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGS 219
Query: 238 TKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESLEHLDMGYSN 297
K + L LD+ +N + L+ L+ L L++ ++N
Sbjct: 220 DKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNN 279
Query: 298 LQRISRSTFLKMTSLKTLILSGNKL 322
L + + NK
Sbjct: 280 LCG-EIPQGGNLQRFDVSAYANNKC 303
Score = 38.6 bits (88), Expect = 0.002
Identities = 17/81 (20%), Positives = 22/81 (27%), Gaps = 1/81 (1%)
Query: 44 YLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYI 103
+ LN LDL N + P L L L ++ NL
Sbjct: 224 QKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGE 283
Query: 104 SPSAFDNLNHLKTLELSQNKL 124
P NL + NK
Sbjct: 284 IPQ-GGNLQRFDVSAYANNKC 303
Score = 37.0 bits (84), Expect = 0.006
Identities = 37/279 (13%), Positives = 66/279 (23%), Gaps = 12/279 (4%)
Query: 98 CNLTY--ISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQS-GISNLP 154
CN T+ + + L+LS L L NL L+ L + +
Sbjct: 34 CNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPI 93
Query: 155 DNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATK 214
A T L L + + + + P + +
Sbjct: 94 PPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLP---PSISSLPN 150
Query: 215 LRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPL 274
L + GN +S A +++ L+ TF +
Sbjct: 151 LVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLE 210
Query: 275 IDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQNLT 334
DA + N +L L L N++ L
Sbjct: 211 GDASVL--FGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLK 268
Query: 335 HLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPL 373
L L ++ L + + + N
Sbjct: 269 FLHSLNVSFNNLC----GEIPQGGNLQRFDVSAYANNKC 303
Score = 35.9 bits (81), Expect = 0.013
Identities = 39/272 (14%), Positives = 74/272 (27%), Gaps = 21/272 (7%)
Query: 264 LQELDISHNPLIDAFT--ALLSPLESLEHLDM-GYSNLQRISRSTFLKMTSLKTLILSGN 320
+ LD+S L + + L+ L L L + G +NL K+T L L ++
Sbjct: 52 VNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHT 111
Query: 321 KLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDST 380
+ + L L+ + L+ + P+L + GN + +
Sbjct: 112 NVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSIS---SLPNLVGITFDGNRISGAIPDS 168
Query: 381 KQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTYPDLEELRLSGNPLHVLPTGNLLPP 440
+ + + + + +
Sbjct: 169 YGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHL 228
Query: 441 QLSRLRSLDLSRCKIDYLPPNVFNNTRNITSLNLANNNLSMTSELSFQFLDVLLELESLD 500
++N+ L+L NN + T L L SL+
Sbjct: 229 A-----------KNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLK---FLHSLN 274
Query: 501 LSNNNLTHISPTVLRHNRAITSIKLVGNPWKC 532
+S NNL P + + N C
Sbjct: 275 VSFNNLCGEIPQ-GGNLQRFDVSAYANNKCLC 305
Score = 30.9 bits (68), Expect = 0.47
Identities = 11/80 (13%), Positives = 22/80 (27%), Gaps = 2/80 (2%)
Query: 464 NNTRNITSLNLANNNLSMTSELSFQFLDVLLELESLDLSNN-NLTHISPTVLRHNRAITS 522
T + +L+L+ NL + + L L L + NL P + +
Sbjct: 47 TQTYRVNNLDLSGLNLPKPYPIPSSLAN-LPYLNFLYIGGINNLVGPIPPAIAKLTQLHY 105
Query: 523 IKLVGNPWKCDCNIADMWEW 542
+ +
Sbjct: 106 LYITHTNVSGAIPDFLSQIK 125
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo
sapiens) [TaxId: 9606]}
Length = 162
Score = 40.3 bits (93), Expect = 2e-04
Identities = 18/151 (11%), Positives = 43/151 (28%), Gaps = 14/151 (9%)
Query: 303 RSTFLKMTSLKTLILSGNKLETLESGLFQNLTHLSVLELNNCGLTRLNETVFHENYTYPD 362
+ + + L L G K+ +E L L ++ ++ + +L+
Sbjct: 11 AAQYTNAVRDRELDLRGYKIPVIE-NLGATLDQFDAIDFSDNEIRKLDGFPLLRRLKTLL 69
Query: 363 LEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILNETVFHENYTYPDLEEL 422
+ R+ L ++ + L L
Sbjct: 70 VNNNRICRIGEG------------LDQALPDLTELILTNNSLVELGDLDPLASLKSLTYL 117
Query: 423 RLSGNPLHVLPTGNL-LPPQLSRLRSLDLSR 452
+ NP+ L + ++ ++R LD +
Sbjct: 118 CILRNPVTNKKHYRLYVIYKVPQVRVLDFQK 148
Score = 36.5 bits (83), Expect = 0.004
Identities = 30/150 (20%), Positives = 54/150 (36%), Gaps = 5/150 (3%)
Query: 36 FLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLML 95
+ A L ++ + I L + +D S N +R ++ F L L+ L++
Sbjct: 14 YTNAVRDRELDLRGYKIPVI-ENLGATLDQFDAIDFSDNEIRKLDG--FPLLRRLKTLLV 70
Query: 96 NRCNLTYISPSAFDNLNHLKTLELSQNKLKS--HIDWTLVLGNLGKLDTLDLRQSGISNL 153
N + I L L L L+ N L +D L +L L L + +
Sbjct: 71 NNNRICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVTNKKHY 130
Query: 154 PDNVFANNTWLRNLNLAENELIDLDVATTL 183
V +R L+ + +L + A +
Sbjct: 131 RLYVIYKVPQVRVLDFQKVKLKERQEAEKM 160
Score = 34.9 bits (79), Expect = 0.014
Identities = 17/133 (12%), Positives = 38/133 (28%), Gaps = 4/133 (3%)
Query: 209 FVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELD 268
+ NA + R L L G + + L + + + + +L R ++
Sbjct: 14 YTNAVRDRELDLRGYKIP--VIENLGATLDQFDAIDFSDNEIRKLDGFPLLRRLKTLLVN 71
Query: 269 ISHNPLIDAFTALLSPLESLEHLDMGY-SNLQRISRSTFLKMTSLKTLI-LSGNKLETLE 326
+ I P + L L + LK + ++ +
Sbjct: 72 NNRICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVTNKKHYR 131
Query: 327 SGLFQNLTHLSVL 339
+ + + VL
Sbjct: 132 LYVIYKVPQVRVL 144
Score = 34.1 bits (77), Expect = 0.021
Identities = 9/40 (22%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
Query: 442 LSRLRSLDLSRCKIDYLPPNVFNNTRNITSLNLANNNLSM 481
R R LDL KI + N+ +++ ++N +
Sbjct: 17 AVRDRELDLRGYKIPVI-ENLGATLDQFDAIDFSDNEIRK 55
Score = 34.1 bits (77), Expect = 0.024
Identities = 8/49 (16%), Positives = 19/49 (38%), Gaps = 4/49 (8%)
Query: 463 FNNTRNITSLNLANNNLSMTSELSFQFLDVLLELESLDLSNNNLTHISP 511
+ N L+L + + L L + +++D S+N + +
Sbjct: 14 YTNAVRDRELDLRGYKIPVIENLGAT----LDQFDAIDFSDNEIRKLDG 58
Score = 33.8 bits (76), Expect = 0.029
Identities = 26/148 (17%), Positives = 46/148 (31%), Gaps = 13/148 (8%)
Query: 150 ISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAF 209
I + N R L+L ++ ++ LG L D++D S+ ++ D F
Sbjct: 8 IEQAAQ--YTNAVRDRELDLRGYKIPVIE---NLGATLDQFDAIDFSDNEIRKL---DGF 59
Query: 210 VNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDI 269
+L+TL ++ N + L L L L N L L
Sbjct: 60 PLLRRLKTLLVNNNR-ICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLC 118
Query: 270 SHNP----LIDAFTALLSPLESLEHLDM 293
++ + + LD
Sbjct: 119 ILRNPVTNKKHYRLYVIYKVPQVRVLDF 146
Score = 30.7 bits (68), Expect = 0.37
Identities = 24/131 (18%), Positives = 51/131 (38%), Gaps = 4/131 (3%)
Query: 19 LITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRI 78
++L I +E + + + K++ F L L L ++ N +
Sbjct: 20 DRELDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKLDG--FPLLRRLKTLLVNNNRICR 77
Query: 79 IEPGVFDPLTSLEYLMLNRCNLTYIS-PSAFDNLNHLKTLELSQNKLKSHIDWTL-VLGN 136
I G+ L L L+L +L + +L L L + +N + + + L V+
Sbjct: 78 IGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYK 137
Query: 137 LGKLDTLDLRQ 147
+ ++ LD ++
Sbjct: 138 VPQVRVLDFQK 148
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor
receptor, N-terminal domain {Human (Homo sapiens)
[TaxId: 9606]}
Length = 156
Score = 39.4 bits (90), Expect = 3e-04
Identities = 24/132 (18%), Positives = 46/132 (34%), Gaps = 6/132 (4%)
Query: 419 LEELRLSGNPLHVLPTGNLLPPQLSRLRSLDLSRCKIDYLPPNVFNNTRNITSLNLANNN 478
LR + + LP + ++ + +L + +L + +
Sbjct: 10 SSGLRCTRDGALDSLHH--LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSG 67
Query: 479 LSMTSELSFQFLDVLLELESLDLSNNNLTHISPTVLRHNRAITSIKLVGNPWKCDCNIAD 538
L + +F F L L+LS N L +S + ++ + L GNP C C +
Sbjct: 68 LRFVAPDAFHFTP---RLSRLNLSFNALESLSWKTV-QGLSLQELVLSGNPLHCSCALRW 123
Query: 539 MWEWATREKGDI 550
+ W G +
Sbjct: 124 LQRWEEEGLGGV 135
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae
(Chlamydomonas reinhardtii) [TaxId: 3055]}
Length = 198
Score = 39.7 bits (91), Expect = 4e-04
Identities = 28/171 (16%), Positives = 53/171 (30%), Gaps = 20/171 (11%)
Query: 298 LQRISRSTFLKMTSLKTLILSGN--KLETLESGLFQNLTHLSVLELNNC---------GL 346
++ + T + + L G +E +++ L L L L+ G+
Sbjct: 11 IRIFEERKSVVATEAEKVELHGMIPPIEKMDATL-STLKACKHLALSTNNIEKISSLSGM 69
Query: 347 TRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILFILN 406
L N ++ + + S+ I + ++ I N
Sbjct: 70 ENLRILSLGRNLIKKIENLDAVADTLEELWISYNQIASLSGIEKLVNLRVLYMSNNKITN 129
Query: 407 ETVFHENYTYPDLEELRLSGNPLHVLPTGNLLPPQ--------LSRLRSLD 449
+ LE+L L+GNPL+ N + L L+ LD
Sbjct: 130 WGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD 180
Score = 34.7 bits (78), Expect = 0.023
Identities = 13/70 (18%), Positives = 23/70 (32%), Gaps = 2/70 (2%)
Query: 204 LSEDAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTC 263
E V AT+ + L G + L L L+L + ++ +
Sbjct: 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEKISS--LSGMEN 71
Query: 264 LQELDISHNP 273
L+ L + N
Sbjct: 72 LRILSLGRNL 81
Score = 29.7 bits (65), Expect = 0.86
Identities = 12/55 (21%), Positives = 19/55 (34%), Gaps = 3/55 (5%)
Query: 45 LYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCN 99
L+ + K+ + L L LS N + I + +L L L R
Sbjct: 30 LHGMIPPIEKM-DATLSTLKACKHLALSTNNIEKISS--LSGMENLRILSLGRNL 81
Score = 28.1 bits (61), Expect = 2.5
Identities = 28/140 (20%), Positives = 46/140 (32%), Gaps = 9/140 (6%)
Query: 105 PSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWL 164
+ L K L LS N ++ I L + L L L ++ I + + +T
Sbjct: 41 DATLSTLKACKHLALSTNNIEK-ISS---LSGMENLRILSLGRNLIKKIENLDAVADTLE 96
Query: 165 RNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNP 224
+ + LV+L L +SN + D KL L L+GNP
Sbjct: 97 ELWISYNQIASLSGI-----EKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNP 151
Query: 225 LSAADLSVALKPLTKLHRLS 244
L ++ +
Sbjct: 152 LYNDYKENNATSEYRIEVVK 171
Score = 27.0 bits (58), Expect = 6.2
Identities = 11/56 (19%), Positives = 21/56 (37%), Gaps = 3/56 (5%)
Query: 418 DLEELRLSGNPLHVLPTGNLLPPQLSRLRSLDLSRCKIDYLPPNVFNNTRNITSLN 473
+ E++ L G + L L + L LS I+ + + N+ L+
Sbjct: 24 EAEKVELHGMIPPIEKMDATLS-TLKACKHLALSTNNIEKISS--LSGMENLRILS 76
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster)
[TaxId: 7227]}
Length = 192
Score = 36.7 bits (83), Expect = 0.004
Identities = 24/97 (24%), Positives = 45/97 (46%)
Query: 20 ITINLNANPIQPVEGAFLVARSLLYLYMQECTLSKINPQFFTNLTTLNKLDLSGNPLRII 79
+ +N N +G F L+ L ++ L+ I P F + + +L L N ++ I
Sbjct: 34 LLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEI 93
Query: 80 EPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKT 116
+F L L+ L L ++ + P +F++LN L +
Sbjct: 94 SNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTS 130
Score = 36.3 bits (82), Expect = 0.005
Identities = 31/141 (21%), Positives = 56/141 (39%), Gaps = 4/141 (2%)
Query: 417 PDLEELRLSGNPLHVLPTGNLLPPQLSRLRSLDLSRCKIDYLPPNVFNNTRNITSLNLAN 476
EL L+ N L RL L K + L N + +
Sbjct: 29 LHTTELLLNDNELGR----ISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQ 84
Query: 477 NNLSMTSELSFQFLDVLLELESLDLSNNNLTHISPTVLRHNRAITSIKLVGNPWKCDCNI 536
+ E+S + L +L++L+L +N ++ + P H ++TS+ L NP+ C+C++
Sbjct: 85 LGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHL 144
Query: 537 ADMWEWATREKGDIGVLVGST 557
A EW ++ + G
Sbjct: 145 AWFAEWLRKKSLNGGAARCGA 165
Score = 30.9 bits (68), Expect = 0.33
Identities = 27/168 (16%), Positives = 54/168 (32%), Gaps = 7/168 (4%)
Query: 213 TKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHN 272
L L+ N L L L +L L+ L+ + N F + +QEL + N
Sbjct: 29 LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGEN 88
Query: 273 PLIDAFTALLSPLESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLESGLFQN 332
+ + + L L+ L++ + + + +F + SL +L L+ N
Sbjct: 89 KIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH----- 143
Query: 333 LTHLSVLELNNCGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDST 380
E D++ L + +++
Sbjct: 144 --LAWFAEWLRKKSLNGGAARCGAPSKVRDVQIKDLPHSEFKCSSENS 189
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes
[TaxId: 1639]}
Length = 199
Score = 36.2 bits (82), Expect = 0.006
Identities = 34/192 (17%), Positives = 55/192 (28%), Gaps = 16/192 (8%)
Query: 61 TNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELS 120
T L K L + + L + L +R + I + LN+L + S
Sbjct: 15 TALAEKMKTVLGKT--NVTDTVSQTDLDQVTTLQADRLGIKSIDG--VEYLNNLTQINFS 70
Query: 121 QNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLNLAENELIDLDVA 180
N+L + + L + T N + L +L
Sbjct: 71 NNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNL 130
Query: 181 TTLGQNLVHLDSLDLSNCHLKGP---------LSEDAFVNATKLRTLYLSGNPLSAADLS 231
L + + + + N T L L +S N +S D+S
Sbjct: 131 NRLELSSNTISDISALSGLTSLQQLNFSSNQVTDLKPLANLTTLERLDISSNKVS--DIS 188
Query: 232 VALKPLTKLHRL 243
L LT L L
Sbjct: 189 -VLAKLTNLESL 199
Score = 33.5 bits (75), Expect = 0.048
Identities = 35/199 (17%), Positives = 61/199 (30%), Gaps = 25/199 (12%)
Query: 154 PDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNAT 213
D A L + + D T +L + +L +K S D
Sbjct: 13 TDTALAE---KMKTVLGKTNVTD----TVSQTDLDQVTTLQADRLGIK---SIDGVEYLN 62
Query: 214 KLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNP 273
L + S N L+ L L + + + ++ L T L I+
Sbjct: 63 NLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDID 122
Query: 274 LIDAFTALLSPLESLEHLD-------------MGYSNLQRISRSTFLKMTSLKTLILSGN 320
+ T L S + + +S+ Q +T+L+ L +S N
Sbjct: 123 PLKNLTNLNRLELSSNTISDISALSGLTSLQQLNFSSNQVTDLKPLANLTTLERLDISSN 182
Query: 321 KLETLESGLFQNLTHLSVL 339
K+ + LT+L L
Sbjct: 183 KVSDISV--LAKLTNLESL 199
Score = 31.6 bits (70), Expect = 0.19
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Query: 56 NPQFFTNLTTLNKLDLSGNPLRIIEPGVFDPLTSLEYL 93
+ + NLTTL +LD+S N + I LT+LE L
Sbjct: 164 DLKPLANLTTLERLDISSNKVSDISV--LAKLTNLESL 199
Score = 31.2 bits (69), Expect = 0.26
Identities = 24/203 (11%), Positives = 62/203 (30%), Gaps = 29/203 (14%)
Query: 285 LESLEHLDMGYSNLQRISRSTFLKMTSLKTLILSGNKLETLES-GLFQNLTHLSVLELNN 343
L +G +N+ + + + TL +++++ NLT ++
Sbjct: 17 LAEKMKTVLGKTNVTDTV--SQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQL 74
Query: 344 CGLTRLNETVFHENYTYPDLEELRLSGNPLHVLPDSTKQYSMRTIPTQIWKNFDFLVILF 403
+T L + + + ++ ++ + KN L L
Sbjct: 75 TDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLE 134
Query: 404 ILNETVFHENYTYPDLEELRLSGNPLHVLPTGNLLPPQLSRLRSLDLSRCKIDYLPPNVF 463
+ + T+ + +L+ + ++ L P
Sbjct: 135 LSSNTISDISALSGLTSLQQLNFS------------------------SNQVTDLKP--L 168
Query: 464 NNTRNITSLNLANNNLSMTSELS 486
N + L++++N +S S L+
Sbjct: 169 ANLTTLERLDISSNKVSDISVLA 191
Score = 30.0 bits (66), Expect = 0.70
Identities = 39/207 (18%), Positives = 70/207 (33%), Gaps = 22/207 (10%)
Query: 109 DNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLRQSGISNLPDNVFANNTWLRNLN 168
L L + + T+ +L ++ TL + GI ++ L +N
Sbjct: 15 TALAEKMKTVLGKTNVTD----TVSQTDLDQVTTLQADRLGIKSIDG--VEYLNNLTQIN 68
Query: 169 LAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSEDAFVNATKLRTLYLSGNPLSAA 228
+ N+L D+ L +L L L L +
Sbjct: 69 FSNNQLTDIT----------PLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQI 118
Query: 229 DLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQELDISHNPLIDAFTALLSPLESL 288
LK LT L+RL L + +S + A + + + + L +L
Sbjct: 119 TDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLNFSSNQVTDLKPL----ANLTTL 174
Query: 289 EHLDMGYSNLQRISRSTFLKMTSLKTL 315
E LD+ + + I S K+T+L++L
Sbjct: 175 ERLDISSNKVSDI--SVLAKLTNLESL 199
Score = 30.0 bits (66), Expect = 0.73
Identities = 47/205 (22%), Positives = 78/205 (38%), Gaps = 25/205 (12%)
Query: 87 LTSLEYLMLNRCNLTYISPSAFDNLNHLKTLELSQNKLKSHIDWTLVLGNLGKLDTLDLR 146
L +L + N+T +L+ + TL+ + +KS ID L NL +++ + +
Sbjct: 17 LAEKMKTVLGKTNVTDTVSQT--DLDQVTTLQADRLGIKS-IDGVEYLNNLTQINFSNNQ 73
Query: 147 QSGISNLPDNVFANNTWLRNLNLAENELIDLDVATTLGQNLVHLDSLDLSNCHLKGPLSE 206
+ I+ L + + + N +A+ L +L +L
Sbjct: 74 LTDITPLKNLTKLVDILMNNNQIADI------------TPLANLTNLTGLTLFNNQITDI 121
Query: 207 DAFVNATKLRTLYLSGNPLSAADLSVALKPLTKLHRLSLRNCGLSRLPANTFHRFTCLQE 266
D N T L L LS N +S L L +L+ S + L T L+
Sbjct: 122 DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLNFSSNQVTDLK-----PLANLTTLER 176
Query: 267 LDISHNPLIDAFTALLSPLESLEHL 291
LDIS N + D +S L L +L
Sbjct: 177 LDISSNKVSD-----ISVLAKLTNL 196
>d1v7za_ c.125.1.1 (A:) Creatininase {Pseudomonas putida [TaxId:
303]}
Length = 257
Score = 29.4 bits (65), Expect = 1.3
Identities = 8/29 (27%), Positives = 16/29 (55%)
Query: 407 ETVFHENYTYPDLEELRLSGNPLHVLPTG 435
++VF T+ + E +G+ + +LP G
Sbjct: 1 KSVFVGELTWKEYEARVAAGDCVLMLPVG 29
>d1w85b2 c.48.1.2 (B:193-324) Pyruvate dehydrogenase E1-beta, PdhB,
C-terminal domain {Bacillus stearothermophilus [TaxId:
1422]}
Length = 132
Score = 27.0 bits (59), Expect = 3.9
Identities = 13/90 (14%), Positives = 23/90 (25%), Gaps = 1/90 (1%)
Query: 7 VYNDRRNLDNPGLITINLNANPIQPVEGAFLVARSLLYLYMQECTLSK-INPQFFTNLTT 65
+ + P+ V ++ + +QE I +
Sbjct: 27 AAAELEKEGISAEVVDLRTVQPLDIETIIGSVEKTGRAIVVQEAQRQAGIAANVVAEINE 86
Query: 66 LNKLDLSGNPLRIIEPGVFDPLTSLEYLML 95
L L LR+ P P E + L
Sbjct: 87 RAILSLEAPVLRVAAPDTVYPFAQAESVWL 116
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.319 0.136 0.405
Gapped
Lambda K H
0.267 0.0630 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,494,147
Number of extensions: 114711
Number of successful extensions: 829
Number of sequences better than 10.0: 1
Number of HSP's gapped: 398
Number of HSP's successfully gapped: 194
Length of query: 694
Length of database: 2,407,596
Length adjustment: 92
Effective length of query: 602
Effective length of database: 1,144,436
Effective search space: 688950472
Effective search space used: 688950472
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (25.6 bits)