Your job contains 1 sequence.
>psy3330
MNYFLTCIFLILALTKLNKAICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRE
NRISNVHYTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKG
LKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDN
NQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALSSNIISFINES
SFVTLRTLHSLDLSNNNLSAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVK
INLIPNLDSIDQPLSLSLPPLLLSLSIPLAFSLTPLGTLKCDRLDLSGNNFSNIDSVAFK
SLFSLKLVKINLIPNLDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSL
KGNSLSHLEASHFPLERISFLDLSDNPLHCDCNLLWLWILVQLQVKSTMETTTVAYEMTS
NTSISPGTTTEAQRVDRIIKNNHSLTIVLNNLKCSSPPDIKGLEVKAVPENSVHCESNTM
LYVLSFMLLLLSSGVICILMYFIYRKRALWKNKINRNLKHQSSYVDNCMNSHPTPILMLY
STGDSDAI
The BLAST search returned 10 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy3330
(608 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0085397 - symbol:Fili "Fish-lips" species:7227 "Dr... 508 1.6e-48 1
FB|FBgn0010452 - symbol:trn "tartan" species:7227 "Drosop... 393 1.0e-34 1
FB|FBgn0023095 - symbol:caps "capricious" species:7227 "D... 360 2.2e-30 1
WB|WBGene00004854 - symbol:slt-1 species:6239 "Caenorhabd... 186 2.5e-24 3
UNIPROTKB|F1NI07 - symbol:IGFALS "Uncharacterized protein... 280 2.6e-24 2
UNIPROTKB|F1MJZ4 - symbol:IGFALS "Uncharacterized protein... 275 1.1e-23 2
UNIPROTKB|F1PSS7 - symbol:SLIT1 "Uncharacterized protein"... 218 1.4e-23 4
UNIPROTKB|O94813 - symbol:SLIT2 "Slit homolog 2 protein" ... 208 4.0e-23 4
UNIPROTKB|Q5T0V0 - symbol:SLIT1 "Slit homolog 1 protein" ... 212 5.3e-23 4
UNIPROTKB|F1P8A1 - symbol:SLIT2 "Uncharacterized protein"... 200 5.9e-23 4
UNIPROTKB|O75093 - symbol:SLIT1 "Slit homolog 1 protein" ... 212 6.7e-23 4
UNIPROTKB|F1NHG5 - symbol:SLIT2 "Uncharacterized protein"... 205 6.7e-23 4
UNIPROTKB|Q1KS52 - symbol:ALS "Acid-labile subunit" speci... 270 8.0e-23 2
UNIPROTKB|F1MLJ7 - symbol:SLIT2 "Uncharacterized protein"... 203 8.6e-23 4
RGD|69307 - symbol:Slit1 "slit homolog 1 (Drosophila)" sp... 211 1.1e-22 4
UNIPROTKB|O88279 - symbol:Slit1 "Slit homolog 1 protein" ... 211 1.1e-22 4
MGI|MGI:1315203 - symbol:Slit1 "slit homolog 1 (Drosophil... 208 2.4e-22 4
MGI|MGI:1315205 - symbol:Slit2 "slit homolog 2 (Drosophil... 212 4.0e-22 4
ZFIN|ZDB-GENE-030722-3 - symbol:slit1a "slit homolog 1a (... 200 2.3e-21 4
FB|FBgn0264089 - symbol:sli "slit" species:7227 "Drosophi... 209 3.5e-21 4
UNIPROTKB|F1S8Z0 - symbol:SLIT1 "Uncharacterized protein"... 183 1.8e-20 4
RGD|69310 - symbol:Slit2 "slit homolog 2 (Drosophila)" sp... 206 2.3e-20 4
UNIPROTKB|E1BP10 - symbol:SLIT1 "Uncharacterized protein"... 183 4.6e-20 4
UNIPROTKB|J9NZ68 - symbol:SLIT2 "Uncharacterized protein"... 200 4.7e-20 3
ZFIN|ZDB-GENE-010306-4 - symbol:slit3 "slit (Drosophila) ... 196 5.8e-20 3
UNIPROTKB|E1C7Z9 - symbol:E1C7Z9 "Uncharacterized protein... 212 6.4e-20 3
UNIPROTKB|F1LRE2 - symbol:Igfals "Insulin-like growth fac... 246 7.1e-20 2
UNIPROTKB|F1LS74 - symbol:Slit1 "Slit homolog 1 protein" ... 184 7.7e-20 4
UNIPROTKB|P35858 - symbol:IGFALS "Insulin-like growth fac... 247 1.2e-19 2
WB|WBGene00022129 - symbol:lron-11 species:6239 "Caenorha... 262 1.3e-19 1
ZFIN|ZDB-GENE-091214-3 - symbol:lingo4b "leucine rich rep... 263 1.4e-19 1
ZFIN|ZDB-GENE-010306-3 - symbol:slit2 "slit (Drosophila) ... 218 1.4e-19 4
UNIPROTKB|O75094 - symbol:SLIT3 "Slit homolog 3 protein" ... 185 4.3e-19 4
UNIPROTKB|J3KNP3 - symbol:SLIT3 "Slit homolog 3 protein" ... 185 4.4e-19 4
MGI|MGI:107973 - symbol:Igfals "insulin-like growth facto... 235 2.1e-18 2
ZFIN|ZDB-GENE-030722-4 - symbol:slit1b "slit homolog 1b (... 180 2.5e-18 4
UNIPROTKB|F1Q3G2 - symbol:SLIT3 "Uncharacterized protein"... 183 3.7e-18 4
RGD|69311 - symbol:Slit3 "slit homolog 3 (Drosophila)" sp... 189 3.7e-18 3
UNIPROTKB|O88280 - symbol:Slit3 "Slit homolog 3 protein" ... 189 3.7e-18 3
MGI|MGI:1315202 - symbol:Slit3 "slit homolog 3 (Drosophil... 187 4.8e-18 3
UNIPROTKB|Q27972 - symbol:CHAD "Chondroadherin" species:9... 181 7.3e-18 2
UNIPROTKB|F1NR92 - symbol:SLIT2 "Uncharacterized protein"... 205 1.1e-17 4
ZFIN|ZDB-GENE-061103-397 - symbol:zgc:153913 "zgc:153913"... 231 1.3e-17 2
RGD|2336 - symbol:Chad "chondroadherin" species:10116 "Ra... 177 1.3e-17 2
UNIPROTKB|F1RR92 - symbol:SLIT3 "Uncharacterized protein"... 181 2.8e-17 3
UNIPROTKB|F1S5C4 - symbol:SLIT2 "Uncharacterized protein"... 204 6.0e-17 3
UNIPROTKB|F1NF14 - symbol:SLIT3 "Uncharacterized protein"... 199 9.2e-17 3
UNIPROTKB|Q6UY18 - symbol:LINGO4 "Leucine-rich repeat and... 177 1.0e-16 2
FB|FBgn0036494 - symbol:Toll-6 "Toll-6" species:7227 "Dro... 241 1.6e-16 1
UNIPROTKB|F1MLX5 - symbol:LGR4 "Uncharacterized protein" ... 238 2.1e-16 1
ZFIN|ZDB-GENE-080327-8 - symbol:lrrtm2 "leucine rich repe... 232 3.0e-16 1
UNIPROTKB|F1NL15 - symbol:SLIT3 "Uncharacterized protein"... 199 3.4e-16 3
UNIPROTKB|F1LN28 - symbol:Slit2 "Slit homolog 2 protein" ... 181 7.0e-16 3
UNIPROTKB|Q86VH4 - symbol:LRRTM4 "Leucine-rich repeat tra... 229 7.8e-16 1
UNIPROTKB|O15335 - symbol:CHAD "Chondroadherin" species:9... 177 8.2e-16 2
UNIPROTKB|Q50LG9 - symbol:LRRC24 "Leucine-rich repeat-con... 227 9.4e-16 1
MGI|MGI:2443198 - symbol:Slitrk6 "SLIT and NTRK-like fami... 156 1.1e-15 3
RGD|1593785 - symbol:Lrrtm2 "leucine rich repeat transmem... 226 1.2e-15 1
WB|WBGene00003915 - symbol:pan-1 species:6239 "Caenorhabd... 227 1.3e-15 1
MGI|MGI:2389174 - symbol:Lrrtm2 "leucine rich repeat tran... 225 1.6e-15 1
FB|FBgn0052055 - symbol:CG32055 species:7227 "Drosophila ... 224 2.2e-15 1
UNIPROTKB|Q96NI6 - symbol:LRFN5 "Leucine-rich repeat and ... 223 2.5e-15 2
UNIPROTKB|Q9NZU1 - symbol:FLRT1 "Leucine-rich repeat tran... 227 2.6e-15 2
UNIPROTKB|E7EW58 - symbol:LRRN3 "Leucine-rich repeat neur... 201 3.0e-15 1
RGD|1565152 - symbol:Flrt1 "fibronectin leucine rich tran... 227 3.1e-15 2
UNIPROTKB|Q7L0X0 - symbol:TRIL "TLR4 interactor with leuc... 225 3.8e-15 1
UNIPROTKB|F1MSM8 - symbol:SLITRK6 "Uncharacterized protei... 157 4.1e-15 2
ZFIN|ZDB-GENE-080327-6 - symbol:flrt1b "fibronectin leuci... 227 4.4e-15 2
UNIPROTKB|E1BG29 - symbol:GP5 "Uncharacterized protein" s... 222 4.5e-15 1
UNIPROTKB|F1P9F0 - symbol:LGR4 "Uncharacterized protein" ... 225 4.5e-15 1
MGI|MGI:107935 - symbol:Lrig1 "leucine-rich repeats and i... 235 4.6e-15 2
UNIPROTKB|Q6NUI6 - symbol:CHADL "Chondroadherin-like prot... 150 5.4e-15 3
UNIPROTKB|A6H701 - symbol:LRRTM2 "Uncharacterized protein... 220 5.7e-15 1
UNIPROTKB|O43300 - symbol:LRRTM2 "Leucine-rich repeat tra... 220 5.7e-15 1
UNIPROTKB|G5E9B3 - symbol:LGR4 "Leucine-rich repeat-conta... 224 6.0e-15 1
UNIPROTKB|F1RP63 - symbol:SLITRK6 "Uncharacterized protei... 163 6.7e-15 2
UNIPROTKB|F1RQ61 - symbol:SLITRK2 "Uncharacterized protei... 154 7.0e-15 2
MGI|MGI:2144814 - symbol:Lrfn5 "leucine rich repeat and f... 226 8.0e-15 2
RGD|1309357 - symbol:Lrfn5 "leucine rich repeat and fibro... 226 8.0e-15 2
UNIPROTKB|P23515 - symbol:OMG "Oligodendrocyte-myelin gly... 217 8.0e-15 1
UNIPROTKB|G3N2N1 - symbol:SLITRK2 "Uncharacterized protei... 153 8.8e-15 2
UNIPROTKB|B3KTY4 - symbol:SLITRK2 "cDNA FLJ38959 fis, clo... 153 9.5e-15 2
UNIPROTKB|A5H649 - symbol:TLR3 "Toll-like receptor 3" spe... 222 9.6e-15 1
MGI|MGI:2389180 - symbol:Lrrtm4 "leucine rich repeat tran... 219 9.9e-15 1
RGD|1560707 - symbol:Lrrtm4 "leucine rich repeat transmem... 219 9.9e-15 1
FB|FBgn0029114 - symbol:Tollo "Tollo" species:7227 "Droso... 235 1.0e-14 2
UNIPROTKB|Q9H5Y7 - symbol:SLITRK6 "SLIT and NTRK-like pro... 158 1.1e-14 2
UNIPROTKB|F1NZH1 - symbol:SLITRK6 "Uncharacterized protei... 161 1.2e-14 2
RGD|1307733 - symbol:Lgr5 "leucine rich repeat containing... 221 1.2e-14 1
MGI|MGI:1891468 - symbol:Lgr4 "leucine-rich repeat-contai... 221 1.3e-14 1
UNIPROTKB|Q9H156 - symbol:SLITRK2 "SLIT and NTRK-like pro... 153 1.4e-14 2
UNIPROTKB|Q9BXB1 - symbol:LGR4 "Leucine-rich repeat-conta... 220 1.7e-14 1
UNIPROTKB|E2RFX7 - symbol:SLITRK6 "Uncharacterized protei... 158 1.8e-14 3
RGD|1562655 - symbol:Tlr13 "toll-like receptor 13" specie... 190 2.1e-14 2
RGD|1306550 - symbol:Slitrk6 "SLIT and NTRK-like family, ... 156 2.3e-14 3
RGD|68429 - symbol:Igfals "insulin-like growth factor bin... 197 2.4e-14 2
RGD|1561361 - symbol:Slitrk2 "SLIT and NTRK-like family, ... 154 2.5e-14 3
ZFIN|ZDB-GENE-030827-4 - symbol:tpbga "trophoblast glycop... 210 2.8e-14 1
ZFIN|ZDB-GENE-080327-22 - symbol:flrt1a "fibronectin leuc... 216 2.8e-14 1
RGD|1566005 - symbol:Flrt3 "fibronectin leucine rich tran... 215 2.8e-14 2
WARNING: Descriptions of 812 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0085397 [details] [associations]
symbol:Fili "Fish-lips" species:7227 "Drosophila
melanogaster" [GO:0003674 "molecular_function" evidence=ND]
[GO:0042981 "regulation of apoptotic process" evidence=IMP]
[GO:0016021 "integral to membrane" evidence=ISM] [GO:0007476
"imaginal disc-derived wing morphogenesis" evidence=IMP]
InterPro:IPR001611 PROSITE:PS51450 EMBL:AE013599 GO:GO:0016021
GO:GO:0042981 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
GO:GO:0007476 GeneTree:ENSGT00700000104286 EMBL:BT015985
RefSeq:NP_001097402.1 UniGene:Dm.32432 SMR:Q5U1A7 STRING:Q5U1A7
EnsemblMetazoa:FBtr0112593 EnsemblMetazoa:FBtr0330338
GeneID:5740472 KEGG:dme:Dmel_CG34368 UCSC:CG34368-RC CTD:5740472
FlyBase:FBgn0085397 InParanoid:Q5U1A7 OMA:KEADDEP OrthoDB:EOG4H9W1T
GenomeRNAi:5740472 NextBio:20891510 Uniprot:Q5U1A7
Length = 738
Score = 508 (183.9 bits), Expect = 1.6e-48, P = 1.6e-48
Identities = 128/310 (41%), Positives = 174/310 (56%)
Query: 8 IFLILALTKL---NKAICPSRCQCF--DQKLEASCTDAGLEVVPIQLNPEVQTIILRENR 62
+ L+L L L A CPS+CQC + A C DA LE VPIQLNPE + I L NR
Sbjct: 25 LLLLLTLVILPPETTAFCPSKCQCLGGEANSRALCVDAALEDVPIQLNPETKYINLTVNR 84
Query: 63 ISNVHYTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLK 122
I + ++L FY++L LDLS N I LGS NFEYQ++L LN+S N +S+L K FKGL
Sbjct: 85 IRTLEFSLPFYMKLEILDLSQNIIETLGSKNFEYQSELRTLNLSRNLVSSLHKHAFKGLT 144
Query: 123 ELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQ 182
L LDLS+N+I ++ TA D L L L+ NNI ED+ F + +L +L NN+
Sbjct: 145 NLLLLDLSFNRIETVHPTALSDLASLVELDLTNNNIVSLEDN-CFKGMNTLEVLVFRNNR 203
Query: 183 ILDVPNNVLSNLPH-QSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXX 241
+LDVP SNL H +L L ++ NL+E V ++SF L L L++
Sbjct: 204 LLDVP---ASNLWHLHALKSLDMSLNLVEFVRNDSFE-GLKELLALSVQGNVMSELDLSA 259
Query: 242 XVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKI 301
L +L +PT+QLSKLS L L+L GN FS + +VAF +LF L+ + +
Sbjct: 260 FEGLISLKHLDLSDNNLTMVPTQQLSKLSNLTYLNLGGNRFSQLPAVAFLNLFHLRELHL 319
Query: 302 NLIPNLDSID 311
+ + L ID
Sbjct: 320 SRLDFLQRID 329
Score = 315 (115.9 bits), Expect = 3.3e-25, P = 3.3e-25
Identities = 103/335 (30%), Positives = 153/335 (45%)
Query: 123 ELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQ 182
E K ++L+ N+I + + + + LE+L LS NI S+ F LR L L N
Sbjct: 74 ETKYINLTVNRIRTL-EFSLPFYMKLEILDLS-QNIIETLGSKNFEYQSELRTLNLSRNL 131
Query: 183 ILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXX 242
+ + + L + L L L+ N IETV + L +L L L
Sbjct: 132 VSSLHKHAFKGLTNLLL--LDLSFNRIETVHPTALS-DLASLVELDLTNNNIVSLEDNCF 188
Query: 243 VTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGN--NFSNIDSV-AFKSLFSLKLV 299
+ TL +P L L AL +LD+S N F DS K L +L V
Sbjct: 189 KGMNTLEVLVFRNNRLLDVPASNLWHLHALKSLDMSLNLVEFVRNDSFEGLKELLALS-V 247
Query: 300 KINLIPNLDSIDQXXXXXXXXXXXXXXXXXAFSLTPLGTLK-CDRLDLSGNNFSNIDSVA 358
+ N++ LD L L L+L GN FS + +VA
Sbjct: 248 QGNVMSELDLSAFEGLISLKHLDLSDNNLTMVPTQQLSKLSNLTYLNLGGNRFSQLPAVA 307
Query: 359 FKSLFSLKLVKINLIPNLDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSV 418
F +LF L+ + ++ + L ID RAFVDN L+T+ +N N L +P +LFQGN N+ V
Sbjct: 308 FLNLFHLRELHLSRLDFLQRIDSRAFVDNTHLQTLHLNNNPQLSDIPMRLFQGNPNILEV 367
Query: 419 SLKGNSLSHLEASHFPLERISFLDLSDNPLHCDCN 453
++ NSL L ++ FP++++ L L DNPL C+C+
Sbjct: 368 YMQSNSLQTLYSAQFPVDQLQKLYLGDNPLQCNCS 402
Score = 131 (51.2 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 41/145 (28%), Positives = 68/145 (46%)
Query: 75 ELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKI 134
EL +L + N ++ L FE L +L++S N ++ + L L L+L N+
Sbjct: 241 ELLALSVQGNVMSELDLSAFEGLISLKHLDLSDNNLTMVPTQQLSKLSNLTYLNLGGNRF 300
Query: 135 SVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNN-QILDVPNNVLSN 193
S + AF + HL L LS + DS F L+ L L+NN Q+ D+P +
Sbjct: 301 SQLPAVAFLNLFHLRELHLSRLDFLQRIDSRAFVDNTHLQTLHLNNNPQLSDIPMRLFQG 360
Query: 194 LPHQSLHYLYLNENLIETVLDNSFP 218
P+ + +Y+ N ++T+ FP
Sbjct: 361 NPN--ILEVYMQSNSLQTLYSAQFP 383
>FB|FBgn0010452 [details] [associations]
symbol:trn "tartan" species:7227 "Drosophila melanogaster"
[GO:0005886 "plasma membrane" evidence=NAS] [GO:0007155 "cell
adhesion" evidence=NAS] [GO:0007424 "open tracheal system
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=TAS] [GO:0035147 "branch fusion, open tracheal system"
evidence=IMP] [GO:0008045 "motor neuron axon guidance"
evidence=IMP] [GO:0007476 "imaginal disc-derived wing
morphogenesis" evidence=IMP] InterPro:IPR001611 PROSITE:PS51450
EMBL:AE014296 GO:GO:0016477 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007155 GO:GO:0008045
InterPro:IPR000372 SMART:SM00013 GO:GO:0007476 GO:GO:0035147
HSSP:Q9BZR6 GeneTree:ENSGT00700000104286 FlyBase:FBgn0010452
CTD:38721 EMBL:AY051439 RefSeq:NP_524055.2 UniGene:Dm.2255
SMR:Q9VU51 MINT:MINT-1567723 STRING:Q9VU51
EnsemblMetazoa:FBtr0075890 GeneID:39491 KEGG:dme:Dmel_CG11280
UCSC:CG11280-RA InParanoid:Q9VU51 OMA:RTFAYQK GenomeRNAi:39491
NextBio:813916 Uniprot:Q9VU51
Length = 737
Score = 393 (143.4 bits), Expect = 1.0e-34, P = 1.0e-34
Identities = 97/284 (34%), Positives = 145/284 (51%)
Query: 20 AICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSFYIELRSL 79
A CP CQC D L C + L+V+PI LNP +Q ++++ N+I + ++ FY EL L
Sbjct: 28 ANCPPGCQCDDNTLVVQCGEGQLDVLPIALNPSIQRLVIKSNKIKTIDSSIQFYAELTFL 87
Query: 80 DLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINK 139
DLS N + + F YQ KL +++++N+I +S TF GL + L+L N+IS +++
Sbjct: 88 DLSSNHLMTIPQRTFAYQKKLQEVHLNHNKIGQISNKTFIGLSAVTVLNLRGNQISELHQ 147
Query: 140 TAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSN-LPHQS 198
F L +E L L N I Y D + F L LRIL LD+N + VP+ V+ +P S
Sbjct: 148 GTFTPLLKIEELNLGENRIGYL-DPKAFDGLSQLRILYLDDNALTTVPDPVIFQAMP--S 204
Query: 199 LHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXX 258
L L+L N ++++ ++F L L L L + L+ L
Sbjct: 205 LAELFLGMNTLQSIQADAFQ-DLKGLTRLELKGASLRNISHDSFLGLQELRILDLSDNRL 263
Query: 259 XAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
IP+ LSKL L L L N+F I AF L LK +++N
Sbjct: 264 DRIPSVGLSKLVRLEQLSLGQNDFEVISEGAFMGLKQLKRLEVN 307
Score = 203 (76.5 bits), Expect = 8.4e-13, P = 8.4e-13
Identities = 85/334 (25%), Positives = 137/334 (41%)
Query: 124 LKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQI 183
++ L + NKI I+ ++ + L L LS N++ F+ K L+ + L++N+I
Sbjct: 61 IQRLVIKSNKIKTID-SSIQFYAELTFLDLSSNHLMTIPQ-RTFAYQKKLQEVHLNHNKI 118
Query: 184 LDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXV 243
+ N L ++ L L N I + +F L + L L
Sbjct: 119 GQISNKTFIGL--SAVTVLNLRGNQISELHQGTFT-PLLKIEELNLGENRIGYLDPKAFD 175
Query: 244 TLRTLHXXXXXXXXXXAIPTKQLSK-LSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
L L +P + + + +L L L N +I + AF+ L L +++
Sbjct: 176 GLSQLRILYLDDNALTTVPDPVIFQAMPSLAELFLGMNTLQSIQADAFQDLKGLTRLELK 235
Query: 303 LIPNLDSIDQXXXXXXXXXXXXXXXXXAFSLTP-LGTLKCDRLD---LSGNNFSNIDSVA 358
+L +I P +G K RL+ L N+F I A
Sbjct: 236 GA-SLRNISHDSFLGLQELRILDLSDNRLDRIPSVGLSKLVRLEQLSLGQNDFEVISEGA 294
Query: 359 FKSLFSLKLVKINLIPNLDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSV 418
F L LK +++N L + AF DN LE + ++ N L ++ G + LK V
Sbjct: 295 FMGLKQLKRLEVNGALRLKRVMTGAFSDNGNLEYLNLSSNKMLLEVQEGALSGLSQLKHV 354
Query: 419 SLKGNSLSHLEASHFPLERISFLDLSDNPLHCDC 452
LK N+L+ L FP + + LDLS+NPL CDC
Sbjct: 355 VLKANALTSLAEGLFPWKDLQTLDLSENPLSCDC 388
>FB|FBgn0023095 [details] [associations]
symbol:caps "capricious" species:7227 "Drosophila
melanogaster" [GO:0007411 "axon guidance" evidence=IMP] [GO:0007424
"open tracheal system development" evidence=IMP] [GO:0016020
"membrane" evidence=NAS] [GO:0007155 "cell adhesion" evidence=NAS]
[GO:0016477 "cell migration" evidence=TAS] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0007156
"homophilic cell adhesion" evidence=IDA] [GO:0035147 "branch
fusion, open tracheal system" evidence=IMP] [GO:0008045 "motor
neuron axon guidance" evidence=IMP] [GO:0042995 "cell projection"
evidence=IDA] [GO:0007476 "imaginal disc-derived wing
morphogenesis" evidence=IMP] [GO:0046331 "lateral inhibition"
evidence=IMP] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
EMBL:AE014296 GO:GO:0016477 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007155 GO:GO:0008045
GO:GO:0042995 GO:GO:0046331 InterPro:IPR000372 SMART:SM00013
GO:GO:0007476 GO:GO:0035147 ChiTaRS:CAPS CTD:828
FlyBase:FBgn0023095 RefSeq:NP_001036604.2 UniGene:Dm.2067
ProteinModelPortal:Q0E8F0 SMR:Q0E8F0 STRING:Q0E8F0 PRIDE:Q0E8F0
GeneID:39493 KEGG:dme:Dmel_CG11282 UCSC:CG11282-RC GenomeRNAi:39493
NextBio:813926 Bgee:Q0E8F0 Uniprot:Q0E8F0
Length = 748
Score = 360 (131.8 bits), Expect = 2.2e-30, P = 2.2e-30
Identities = 92/297 (30%), Positives = 142/297 (47%)
Query: 7 CIFLILAL--TKLNKAICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRIS 64
C+ L+LA L A CP+ C+C D L +C + L+V+PI LNP +Q ++++ N++
Sbjct: 26 CLCLVLATLPVALGLANCPNGCECDDDTLMVNCGEGTLDVLPIALNPAIQRLVIKNNKLK 85
Query: 65 NVHYTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKEL 124
+ ++ FY +L LDLS N + + +F Y KL L++ +N+I +S TF GL +
Sbjct: 86 TIDSSMQFYAQLTFLDLSFNDMLTIPERSFAYHAKLQELHLDHNKIGQVSNKTFLGLSTI 145
Query: 125 KTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQIL 184
L+L N I+ + F + L L L N I++ D L +LR+L LD+N +
Sbjct: 146 SVLNLRGNLIAELEYRTFSPMVKLAELNLGQNRISHI-DPHALDGLDNLRVLYLDDNTLT 204
Query: 185 DVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVT 244
VP + H SL LYL N T+ +F L L L L
Sbjct: 205 TVPGELTFQALH-SLAELYLGTNSFMTIPGGAFQ-DLKGLTRLDLRGAGLHNISGDALKG 262
Query: 245 LRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKI 301
L +L AIPT +L L L++ N+F I S AF L L+ +++
Sbjct: 263 LVSLRFLDLSDNRLPAIPTAAFQRLGRLEQLNIGQNDFEVISSGAFSGLRELRHLEL 319
Score = 210 (79.0 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 84/334 (25%), Positives = 133/334 (39%)
Query: 124 LKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQI 183
++ L + NK+ I+ ++ + L L LSFN++ + F+ L+ L LD+N+I
Sbjct: 74 IQRLVIKNNKLKTID-SSMQFYAQLTFLDLSFNDMLTIPERS-FAYHAKLQELHLDHNKI 131
Query: 184 LDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXV 243
V N L ++ L L NLI + +F + L L L
Sbjct: 132 GQVSNKTFLGL--STISVLNLRGNLIAELEYRTFS-PMVKLAELNLGQNRISHIDPHALD 188
Query: 244 TLRTLHXXXXXXXXXXAIPTK-QLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
L L +P + L +L L L N+F I AF+ L L + +
Sbjct: 189 GLDNLRVLYLDDNTLTTVPGELTFQALHSLAELYLGTNSFMTIPGGAFQDLKGLTRLDLR 248
Query: 303 LIPNLDSIDQXXXXXXXXXXXXXXXXXAFSLTPLGTL----KCDRLDLSGNNFSNIDSVA 358
L +I P + ++L++ N+F I S A
Sbjct: 249 GA-GLHNISGDALKGLVSLRFLDLSDNRLPAIPTAAFQRLGRLEQLNIGQNDFEVISSGA 307
Query: 359 FKSLFSLKLVKINLIPNLDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSV 418
F L L+ +++ L ++ AF N LE + ++ N L +L S G +L +V
Sbjct: 308 FSGLRELRHLELTGAQRLRRVESGAFSGNTNLEHLNLSSNKQLNELSSIALGGLPHLSTV 367
Query: 419 SLKGNSLSHLEASHFPLERISFLDLSDNPLHCDC 452
LK N LS L+ P + LDLS+NP CDC
Sbjct: 368 VLKANQLSSLDEGLVPWADLQTLDLSENPFECDC 401
Score = 135 (52.6 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 42/138 (30%), Positives = 65/138 (47%)
Query: 74 IELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLS-YN 132
+ LR LDLS N++ + + F+ +L LNI N+ +S F GL+EL+ L+L+
Sbjct: 264 VSLRFLDLSDNRLPAIPTAAFQRLGRLEQLNIGQNDFEVISSGAFSGLRELRHLELTGAQ 323
Query: 133 KISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLS 192
++ + AF +LE L LS N S L L + L NQ+ + ++
Sbjct: 324 RLRRVESGAFSGNTNLEHLNLSSNKQLNELSSIALGGLPHLSTVVLKANQLSSLDEGLV- 382
Query: 193 NLPHQSLHYLYLNENLIE 210
P L L L+EN E
Sbjct: 383 --PWADLQTLDLSENPFE 398
>WB|WBGene00004854 [details] [associations]
symbol:slt-1 species:6239 "Caenorhabditis elegans"
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=ISS] [GO:0005102 "receptor binding"
evidence=ISS;IPI] [GO:0033563 "dorsal/ventral axon guidance"
evidence=IGI;IMP] [GO:0001764 "neuron migration" evidence=IMP]
[GO:0048843 "negative regulation of axon extension involved in axon
guidance" evidence=IGI] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0001764
GO:GO:0005576 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005102 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186
InterPro:IPR001791 SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 InterPro:IPR006207
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 HSSP:P00740
GO:GO:0033563 GeneTree:ENSGT00700000104083 EMBL:Z69792
GO:GO:0048843 EMBL:AL022270 PIR:D89711 PIR:T22025
RefSeq:NP_510437.2 ProteinModelPortal:G5EFX6 SMR:G5EFX6
EnsemblMetazoa:F40E10.4 GeneID:181562 KEGG:cel:CELE_F40E10.4
CTD:181562 WormBase:F40E10.4 OMA:KSISHIA NextBio:914450
Uniprot:G5EFX6
Length = 1410
Score = 186 (70.5 bits), Expect = 2.5e-24, Sum P(3) = 2.5e-24
Identities = 56/188 (29%), Positives = 94/188 (50%)
Query: 5 LTCIFLILALTKLNKAICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRIS 64
L C IL + + A CP+ C C D+ + SC L VP + + + L++N I+
Sbjct: 2 LICFIFILLIPE--SATCPAECVCVDRTV--SCVGQQLTEVPQNIPNDTIRLDLQDNEIT 57
Query: 65 NVHYT-LSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKE 123
+ S + L++L L N+I + + +F L L +S N I L + F+ +
Sbjct: 58 KIGPNDFSSLMNLKALQLMDNQIVTIHNQSFSSLVFLQKLRLSRNRIRHLPDNVFQNNLK 117
Query: 124 LKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQI 183
L LDLS N I+V++ + LE+L L N+I E++ + SS SL +L L+ N++
Sbjct: 118 LTHLDLSENDITVVSDAQLQGPEFLEVLNLDKNHIFCLENN-VISSWVSLEVLTLNGNRL 176
Query: 184 --LDVPNN 189
+ P+N
Sbjct: 177 TTFEEPSN 184
Score = 159 (61.0 bits), Expect = 7.7e-17, Sum P(3) = 7.7e-17
Identities = 46/133 (34%), Positives = 69/133 (51%)
Query: 79 LDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVIN 138
LDL N+I +G ++F L L + N+I + +F L L+ L LS N+I +
Sbjct: 49 LDLQDNEITKIGPNDFSSLMNLKALQLMDNQIVTIHNQSFSSLVFLQKLRLSRNRIRHLP 108
Query: 139 KTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQS 198
F++ L L L LS N+IT D+++ + L +L LD N I + NNV+S+ S
Sbjct: 109 DNVFQNNLKLTHLDLSENDITVVSDAQL-QGPEFLEVLNLDKNHIFCLENNVISSWV--S 165
Query: 199 LHYLYLNENLIET 211
L L LN N + T
Sbjct: 166 LEVLTLNGNRLTT 178
Score = 158 (60.7 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 48/194 (24%), Positives = 91/194 (46%)
Query: 21 ICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVH-YTLSFYIELRSL 79
+CP +C C D+ + C++ L P ++ + + L N I+ + + L+ L L
Sbjct: 676 LCPPKCSCLDRVVR--CSNKNLTSFPSRIPFDTTELYLDANYINEIPAHDLNRLYSLTKL 733
Query: 80 DLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINK 139
DLS N++ L ++ F +L L ISYN++ L F GL L+ L L N IS + +
Sbjct: 734 DLSHNRLISLENNTFSNLTRLSTLIISYNKLRCLQPLAFNGLNALRILSLHGNDISFLPQ 793
Query: 140 TAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSL 199
+AF + + + + N++ + FS + ++ + + PN V + L +
Sbjct: 794 SAFSNLTSITHIAVGSNSLYCDCNMAWFSKWIKSKFIEAGIARC-EYPNTVSNQLLLTAQ 852
Query: 200 HYLYLNENLIETVL 213
Y + ++ + T L
Sbjct: 853 PYQFTCDSKVPTKL 866
Score = 152 (58.6 bits), Expect = 5.8e-15, Sum P(2) = 5.8e-15
Identities = 45/171 (26%), Positives = 78/171 (45%)
Query: 20 AICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQT-IILRENRISNVHYTLSFYI--EL 76
+ICP++C C+ ++ C GL +P + P T ++L N IS V + ++ L
Sbjct: 483 SICPTQCDCYGTTVD--CNKRGLNTIPTSI-PRFATQLLLSGNNISTVDLNSNIHVLENL 539
Query: 77 RSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISV 136
LDLS N I + +FE +KL L ++ N++ S L+ LDLS N I
Sbjct: 540 EVLDLSNNHITFINDKSFEKLSKLRELRLNDNKLHHFSSMVLDEQSNLEILDLSGNNIQC 599
Query: 137 INKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVP 187
+ F + + + N++ D I + LR +++ +D+P
Sbjct: 600 FSSIFFNKATRIREIKVIGNDLLC--DCRILPLMSWLRS---NSSHSIDIP 645
Score = 147 (56.8 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 49/163 (30%), Positives = 77/163 (47%)
Query: 25 RCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSFY----IELRSLD 80
RC F E +C+D L P + + R R SN + T SF + L
Sbjct: 661 RCAAFP---EETCSDDS------NLCPPKCSCLDRVVRCSNKNLT-SFPSRIPFDTTELY 710
Query: 81 LSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKT 140
L N IN + +H+ L L++S+N + +L +TF L L TL +SYNK+ +
Sbjct: 711 LDANYINEIPAHDLNRLYSLTKLDLSHNRLISLENNTFSNLTRLSTLIISYNKLRCLQPL 770
Query: 141 AFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQI 183
AF L +L L N+I++ S FS+L S+ + + +N +
Sbjct: 771 AFNGLNALRILSLHGNDISFLPQSA-FSNLTSITHIAVGSNSL 812
Score = 142 (55.0 bits), Expect = 7.8e-17, Sum P(3) = 7.8e-17
Identities = 50/178 (28%), Positives = 83/178 (46%)
Query: 31 QKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLS-FYIELRSLDLSVNKINVL 89
++ + +C A E+ P+ T+ R++ ++ V L E+R L N+I+ +
Sbjct: 248 RRYKKTCETA--EICPLPCTCTGTTVDCRDSGLTYVPTNLPPSTTEIR---LEQNQISSI 302
Query: 90 GSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLE 149
SH+F+ L L++S N I+ + F GL L TL L N I+ + F L+
Sbjct: 303 PSHSFKNLKNLTRLDLSKNIITEIQPKAFLGLHNLHTLVLYGNNITDLKSDTFEGLGSLQ 362
Query: 150 LLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNEN 207
LL+L+ N +T F + L +L L +N I + NL SL L+L +N
Sbjct: 363 LLLLNANQLTCIRRGT-FDHVPKLSMLSLYDNDIKSISEVTFQNLT--SLSTLHLAKN 417
Score = 133 (51.9 bits), Expect = 1.6e-18, Sum P(3) = 1.6e-18
Identities = 40/130 (30%), Positives = 68/130 (52%)
Query: 53 VQTIILRENRISNVH-YTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEIS 111
++ + L +N+I +H + S + L+ L LS N+I L + F+ KL +L++S N+I+
Sbjct: 70 LKALQLMDNQIVTIHNQSFSSLVFLQKLRLSRNRIRHLPDNVFQNNLKLTHLDLSENDIT 129
Query: 112 ALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLK 171
+S +G + L+ L+L N I + + LE+L L+ N +T FE+ S
Sbjct: 130 VVSDAQLQGPEFLEVLNLDKNHIFCLENNVISSWVSLEVLTLNGNRLTTFEEP----SNA 185
Query: 172 SLRILKLDNN 181
R L L NN
Sbjct: 186 RFRQLDLFNN 195
Score = 128 (50.1 bits), Expect = 2.5e-24, Sum P(3) = 2.5e-24
Identities = 39/112 (34%), Positives = 58/112 (51%)
Query: 344 LDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNLK 402
L L N + I + L+SL K++L N L S++ F + +L T+II+ N L+
Sbjct: 709 LYLDANYINEIPAHDLNRLYSL--TKLDLSHNRLISLENNTFSNLTRLSTLIISYN-KLR 765
Query: 403 QLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPLHCDCN 453
L F G L+ +SL GN +S L S F L I+ + + N L+CDCN
Sbjct: 766 CLQPLAFNGLNALRILSLHGNDISFLPQSAFSNLTSITHIAVGSNSLYCDCN 817
Score = 104 (41.7 bits), Expect = 3.7e-16, Sum P(2) = 3.7e-16
Identities = 32/105 (30%), Positives = 56/105 (53%)
Query: 346 LSGNNFSNIDSVAFKSLFSLKLVKINLIPNL-DSIDQRAFVDNIQLETVIINENMNLKQL 404
L N S+I S +FK+L +L +++L N+ I +AF+ L T+++ N N+ L
Sbjct: 294 LEQNQISSIPSHSFKNLKNL--TRLDLSKNIITEIQPKAFLGLHNLHTLVLYGN-NITDL 350
Query: 405 PSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPL 448
S F+G +L+ + L N L+ + F + ++S L L DN +
Sbjct: 351 KSDTFEGLGSLQLLLLNANQLTCIRRGTFDHVPKLSMLSLYDNDI 395
Score = 103 (41.3 bits), Expect = 4.7e-16, Sum P(2) = 4.7e-16
Identities = 38/114 (33%), Positives = 55/114 (48%)
Query: 343 RLDLSGNNFSNIDSVAFKSLFSLKLVKI--NLIPNLDSIDQRAFVDNIQLETVIINENMN 400
RLDLS N + I AF L +L + + N I +L S D + ++QL +++N N
Sbjct: 315 RLDLSKNIITEIQPKAFLGLHNLHTLVLYGNNITDLKS-DTFEGLGSLQL--LLLNANQ- 370
Query: 401 LKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPLHCDCN 453
L + F L +SL N + + F L +S L L+ NPL CDCN
Sbjct: 371 LTCIRRGTFDHVPKLSMLSLYDNDIKSISEVTFQNLTSLSTLHLAKNPLICDCN 424
Score = 101 (40.6 bits), Expect = 2.5e-24, Sum P(3) = 2.5e-24
Identities = 33/126 (26%), Positives = 54/126 (42%)
Query: 176 LKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXX 235
++L+ NQI +P++ NL ++L L L++N+I + +F L NLHTL L
Sbjct: 292 IRLEQNQISSIPSHSFKNL--KNLTRLDLSKNIITEIQPKAF-LGLHNLHTLVLYGNNIT 348
Query: 236 XXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFS 295
L +L I + L L L N+ +I V F++L S
Sbjct: 349 DLKSDTFEGLGSLQLLLLNANQLTCIRRGTFDHVPKLSMLSLYDNDIKSISEVTFQNLTS 408
Query: 296 LKLVKI 301
L + +
Sbjct: 409 LSTLHL 414
Score = 94 (38.1 bits), Expect = 8.0e-21, Sum P(3) = 8.0e-21
Identities = 30/112 (26%), Positives = 57/112 (50%)
Query: 343 RLDLSGNNFSNID-SVAFKSLFSLKLVKINLIPNLDSIDQRAFVDNIQLETVIINENMNL 401
+L LSGNN S +D + L +L+++ ++ ++ I+ ++F +L + +N+N L
Sbjct: 516 QLLLSGNNISTVDLNSNIHVLENLEVLDLSN-NHITFINDKSFEKLSKLRELRLNDN-KL 573
Query: 402 KQLPSKLFQGNTNLKSVSLKGNSLSHLEASHF-PLERISFLDLSDNPLHCDC 452
S + +NL+ + L GN++ + F RI + + N L CDC
Sbjct: 574 HHFSSMVLDEQSNLEILDLSGNNIQCFSSIFFNKATRIREIKVIGNDLLCDC 625
Score = 89 (36.4 bits), Expect = 2.4e-11, Sum P(3) = 2.4e-11
Identities = 24/83 (28%), Positives = 46/83 (55%)
Query: 53 VQTIILRENRISNVHY-TLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEIS 111
+ T++L N I+++ T L+ L L+ N++ + F++ KL L++ N+I
Sbjct: 337 LHTLVLYGNNITDLKSDTFEGLGSLQLLLLNANQLTCIRRGTFDHVPKLSMLSLYDNDIK 396
Query: 112 ALSKDTFKGLKELKTLDLSYNKI 134
++S+ TF+ L L TL L+ N +
Sbjct: 397 SISEVTFQNLTSLSTLHLAKNPL 419
Score = 82 (33.9 bits), Expect = 7.1e-14, Sum P(2) = 7.1e-14
Identities = 28/91 (30%), Positives = 48/91 (52%)
Query: 336 LGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFVDNI-QLETVI 394
LG L L GNN +++ S F+ L SL+L+ +N L I + F D++ +L +
Sbjct: 332 LGLHNLHTLVLYGNNITDLKSDTFEGLGSLQLLLLNA-NQLTCIRRGTF-DHVPKLSMLS 389
Query: 395 INENMNLKQLPSKLFQGNTNLKSVSLKGNSL 425
+ +N ++K + FQ T+L ++ L N L
Sbjct: 390 LYDN-DIKSISEVTFQNLTSLSTLHLAKNPL 419
Score = 75 (31.5 bits), Expect = 1.2e-21, Sum P(3) = 1.2e-21
Identities = 30/114 (26%), Positives = 43/114 (37%)
Query: 188 NNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRT 247
N + +++P + L L+ N I TV NS L NL L L L
Sbjct: 504 NTIPTSIPRFATQLL-LSGNNISTVDLNSNIHVLENLEVLDLSNNHITFINDKSFEKLSK 562
Query: 248 LHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKI 301
L + L + S L LDLSGNN S+ F ++ +K+
Sbjct: 563 LRELRLNDNKLHHFSSMVLDEQSNLEILDLSGNNIQCFSSIFFNKATRIREIKV 616
Score = 72 (30.4 bits), Expect = 7.7e-13, Sum P(2) = 7.7e-13
Identities = 37/179 (20%), Positives = 71/179 (39%)
Query: 369 KINLIPN-LDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSH 427
+I L N + SI +F + L + +++N+ + ++ K F G NL ++ L GN+++
Sbjct: 291 EIRLEQNQISSIPSHSFKNLKNLTRLDLSKNI-ITEIQPKAFLGLHNLHTLVLYGNNITD 349
Query: 428 LEASHFP-LERISFLDLSDNPLHC------D-CNXXXXXXXXXXXXKSTMETTTVAYEMT 479
L++ F L + L L+ N L C D KS E T
Sbjct: 350 LKSDTFEGLGSLQLLLLNANQLTCIRRGTFDHVPKLSMLSLYDNDIKSISEVTFQNLTSL 409
Query: 480 SNTSISPGTTTEAQRVDRIIKNNHSLTIVLNNLKCSSPPDIKGLEVKAVPENSVHCESN 538
S ++ + + + N I + +C P ++ + +P N C+ +
Sbjct: 410 STLHLAKNPLICDCNLQWLAQINLQKNIETSGARCEQPKRLRKKKFATLPPNKFKCKGS 468
Score = 65 (27.9 bits), Expect = 2.4e-10, Sum P(3) = 2.4e-10
Identities = 19/57 (33%), Positives = 29/57 (50%)
Query: 151 LILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNEN 207
L+LS NNI+ + + L++L +L L NN I + + L L L LN+N
Sbjct: 517 LLLSGNNISTVDLNSNIHVLENLEVLDLSNNHITFINDKSFEKL--SKLRELRLNDN 571
Score = 62 (26.9 bits), Expect = 1.5e-17, Sum P(3) = 1.5e-17
Identities = 21/83 (25%), Positives = 40/83 (48%)
Query: 343 RLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFVDNIQLETVIINENMNLK 402
+LDLS N ++++ F +L L + I+ L + AF L + ++ N ++
Sbjct: 732 KLDLSHNRLISLENNTFSNLTRLSTLIISY-NKLRCLQPLAFNGLNALRILSLHGN-DIS 789
Query: 403 QLPSKLFQGNTNLKSVSLKGNSL 425
LP F T++ +++ NSL
Sbjct: 790 FLPQSAFSNLTSITHIAVGSNSL 812
Score = 57 (25.1 bits), Expect = 8.5e-20, Sum P(3) = 8.5e-20
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 261 IPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
I K L L L L GNN +++ S F+ L SL+L+ +N
Sbjct: 326 IQPKAFLGLHNLHTLVLYGNNITDLKSDTFEGLGSLQLLLLN 367
Score = 51 (23.0 bits), Expect = 3.5e-19, Sum P(3) = 3.5e-19
Identities = 12/34 (35%), Positives = 21/34 (61%)
Query: 269 LSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
L L LDLS N+ + I+ +F+ L L+ +++N
Sbjct: 536 LENLEVLDLSNNHITFINDKSFEKLSKLRELRLN 569
Score = 44 (20.5 bits), Expect = 6.1e-10, Sum P(2) = 6.1e-10
Identities = 11/42 (26%), Positives = 19/42 (45%)
Query: 392 TVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHF 433
T I E + +PS F+ NL + L N ++ ++ F
Sbjct: 290 TEIRLEQNQISSIPSHSFKNLKNLTRLDLSKNIITEIQPKAF 331
Score = 43 (20.2 bits), Expect = 7.7e-10, Sum P(2) = 7.7e-10
Identities = 6/29 (20%), Positives = 16/29 (55%)
Query: 510 NNLKCSSPPDIKGLEVKAVPENSVHCESN 538
N C++P +++G ++ + + + C N
Sbjct: 217 NKTVCATPLNLQGSSIEILQDKFMTCSGN 245
Score = 42 (19.8 bits), Expect = 2.9e-18, Sum P(3) = 2.9e-18
Identities = 11/42 (26%), Positives = 20/42 (47%)
Query: 261 IPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
I K KLS L L L+ N + S+ +L+++ ++
Sbjct: 552 INDKSFEKLSKLRELRLNDNKLHHFSSMVLDEQSNLEILDLS 593
Score = 39 (18.8 bits), Expect = 3.4e-15, Sum P(3) = 3.4e-15
Identities = 33/150 (22%), Positives = 56/150 (37%)
Query: 390 LETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPL 448
L+ V+ N NL PS++ T L L N ++ + A L ++ LDLS N L
Sbjct: 684 LDRVVRCSNKNLTSFPSRIPFDTTELY---LDANYINEIPAHDLNRLYSLTKLDLSHNRL 740
Query: 449 HCDCNXXXXXXXXXXXXKSTMETTTVAYEMTSNTSISPGTTTEAQRVDRIIKNNHSLTIV 508
+ + T ++Y A R+ + N+ S
Sbjct: 741 -------ISLENNTFSNLTRLSTLIISYNKLRCLQPLAFNGLNALRILSLHGNDISF--- 790
Query: 509 LNNLKCSSPPDIKGLEVKAVPENSVHCESN 538
L S+ ++ + AV NS++C+ N
Sbjct: 791 ---LPQSAFSNLTSITHIAVGSNSLYCDCN 817
Score = 38 (18.4 bits), Expect = 4.3e-15, Sum P(3) = 4.3e-15
Identities = 44/199 (22%), Positives = 79/199 (39%)
Query: 344 LDLSGNNFSNIDSVAFKSLFSLKLVKI---------NLIPNLDSIDQRAF--VDNIQLET 392
LDLSGNN S+ F ++ +K+ ++P + + + +D +
Sbjct: 590 LDLSGNNIQCFSSIFFNKATRIREIKVIGNDLLCDCRILPLMSWLRSNSSHSIDIPPCQQ 649
Query: 393 VIINENMNLKQ----LPSKLFQGNTNL---KSVSL-KGNSLSHLEASHFPLERISFLDLS 444
++N + KQ P + ++NL K L + S+ + FP RI F D +
Sbjct: 650 FQYSDNESDKQRCAAFPEETCSDDSNLCPPKCSCLDRVVRCSNKNLTSFP-SRIPF-DTT 707
Query: 445 DNPLHCDCNXXXXXXXXXXXXKSTMETTTVAYEMTSNTSISPGTTTEAQRVDRIIKNNHS 504
+ L+ D N + + + T +++ N IS T + + R+ +
Sbjct: 708 E--LYLDANYINEIPAHDL---NRLYSLT-KLDLSHNRLISLENNTFSN-LTRL----ST 756
Query: 505 LTIVLNNLKCSSPPDIKGL 523
L I N L+C P GL
Sbjct: 757 LIISYNKLRCLQPLAFNGL 775
>UNIPROTKB|F1NI07 [details] [associations]
symbol:IGFALS "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005634 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GeneTree:ENSGT00690000101816 OMA:FCGLGEL
EMBL:AADN02049426 IPI:IPI00576764 Ensembl:ENSGALT00000003657
Uniprot:F1NI07
Length = 604
Score = 280 (103.6 bits), Expect = 2.6e-24, Sum P(2) = 2.6e-24
Identities = 99/379 (26%), Positives = 161/379 (42%)
Query: 76 LRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKIS 135
L L L N++ L H F + L++L+++ N S + + F GL L L+L +N +
Sbjct: 119 LYHLHLERNRLKYLAPHTFLHTQNLVSLSLNNNLFSKVEEGLFAGLSNLWYLNLGWNSLV 178
Query: 136 VINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLP 195
V+ F D +L LIL+ N + Y + ++F SL L+ L L N + + N+ L
Sbjct: 179 VLPDKVFHDLPNLRELILAGNKLPYLQH-QLFCSLTELKELDLSGNALKGIKINIFVKL- 236
Query: 196 HQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXX 255
Q L LYLN N I + +F + +L L L + L +LH
Sbjct: 237 -QKLQKLYLNNNQINAIAPRAF-MGMKSLRWLDLSHNRLTSLYEDTFLGLLSLHVLRLST 294
Query: 256 XXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQXXX 315
++ + L L L L N ++ F L L+++ +N L I
Sbjct: 295 NSITSLRPRTFKDLQFLEELQLGHNRIWSLAERTFDGLGQLEVLSLNN-NQLQDIKAGAF 353
Query: 316 XXXXXXXXXXXXXXAFSLTPL----GTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKIN 371
P G K L L + S I + F SL SL+ ++
Sbjct: 354 LGLYNVAVMHLSANCIKTLPEYVFEGVTKLHSLHLEHSCLSKIRANTFSSLTSLR--RLF 411
Query: 372 LIPN-LDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEA 430
L N + +I+ ++F + +L + + N L L +LF G +NL+ + L N + +
Sbjct: 412 LQHNAISTIEDQSFRELHELLELDLKHN-RLSHLSPQLFVGLSNLEYLFLSFNQIMDISQ 470
Query: 431 SHF-PLERISFLDLSDNPL 448
+ F PL R+ +LDLS N L
Sbjct: 471 NTFSPLRRLFWLDLSHNQL 489
Score = 223 (83.6 bits), Expect = 8.8e-18, Sum P(2) = 8.8e-18
Identities = 83/326 (25%), Positives = 142/326 (43%)
Query: 51 PEVQTIILRENRISNVHYTLSFYI-ELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNE 109
P ++ +IL N++ + + L + EL+ LDLS N + + + F KL L ++ N+
Sbjct: 189 PNLRELILAGNKLPYLQHQLFCSLTELKELDLSGNALKGIKINIFVKLQKLQKLYLNNNQ 248
Query: 110 ISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSS 169
I+A++ F G+K L+ LDLS+N+++ + + F L L +L LS N+IT F
Sbjct: 249 INAIAPRAFMGMKSLRWLDLSHNRLTSLYEDTFLGLLSLHVLRLSTNSITSLRP-RTFKD 307
Query: 170 LKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLAL 229
L+ L L+L +N+I + L L L LN N ++ + +F L N+ + L
Sbjct: 308 LQFLEELQLGHNRIWSLAERTFDGLGQ--LEVLSLNNNQLQDIKAGAF-LGLYNVAVMHL 364
Query: 230 XXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVA 289
+ LH I S L++L L L N S I+ +
Sbjct: 365 SANCIKTLPEYVFEGVTKLHSLHLEHSCLSKIRANTFSSLTSLRRLFLQHNAISTIEDQS 424
Query: 290 FKSLFSL-KL-VKINLIPNLDS---IDQXXXXXXXXXXXXXXXXXAFSLTPLGTLKCDRL 344
F+ L L +L +K N + +L + + +PL L L
Sbjct: 425 FRELHELLELDLKHNRLSHLSPQLFVGLSNLEYLFLSFNQIMDISQNTFSPLRRLFW--L 482
Query: 345 DLSGNNFSNIDSVAFKSLFSLKLVKI 370
DLS N + +D+ L +L+ + +
Sbjct: 483 DLSHNQLATLDNAVITQLANLRYLSL 508
Score = 193 (73.0 bits), Expect = 2.0e-14, Sum P(2) = 2.0e-14
Identities = 100/441 (22%), Positives = 174/441 (39%)
Query: 22 CPSRCQC----FDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSFYIE-L 76
CPS C C + ++L C+ L +P + I L N + + + L
Sbjct: 36 CPSPCACSLDDYSEELNVFCSGRNLTQLPDDFPTNAKAIWLDGNNFTQLPAAAFRNLSGL 95
Query: 77 RSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISV 136
LDL +++ + H F L +L++ N + L+ TF + L +L L+ N S
Sbjct: 96 DFLDLQSSQLAAVEQHAFHGLRSLYHLHLERNRLKYLAPHTFLHTQNLVSLSLNNNLFSK 155
Query: 137 INKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPH 196
+ + F +L L L +N++ D ++F L +LR L L N++ + + + +L
Sbjct: 156 VEEGLFAGLSNLWYLNLGWNSLVVLPD-KVFHDLPNLRELILAGNKLPYLQHQLFCSLTE 214
Query: 197 QSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXX 256
L L L+ N ++ + N F L L L L + +++L
Sbjct: 215 --LKELDLSGNALKGIKINIF-VKLQKLQKLYLNNNQINAIAPRAFMGMKSLRWLDLSHN 271
Query: 257 XXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKI--NLIPNL-----DS 309
++ L +L L LS N+ +++ FK L L+ +++ N I +L D
Sbjct: 272 RLTSLYEDTFLGLLSLHVLRLSTNSITSLRPRTFKDLQFLEELQLGHNRIWSLAERTFDG 331
Query: 310 IDQXXXXXXXXXXXXXXXXXAFSLTPLGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVK 369
+ Q AF LG + LS N + F+ + KL
Sbjct: 332 LGQLEVLSLNNNQLQDIKAGAF----LGLYNVAVMHLSANCIKTLPEYVFEGV--TKLHS 385
Query: 370 INLIPN-LDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHL 428
++L + L I F L + + N + + + F+ L + LK N LSHL
Sbjct: 386 LHLEHSCLSKIRANTFSSLTSLRRLFLQHNA-ISTIEDQSFRELHELLELDLKHNRLSHL 444
Query: 429 EASHFP-LERISFLDLSDNPL 448
F L + +L LS N +
Sbjct: 445 SPQLFVGLSNLEYLFLSFNQI 465
Score = 175 (66.7 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 51/160 (31%), Positives = 80/160 (50%)
Query: 53 VQTIILRENRISNV-HYTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEIS 111
V + L N I + Y +L SL L + ++ + ++ F L L + +N IS
Sbjct: 359 VAVMHLSANCIKTLPEYVFEGVTKLHSLHLEHSCLSKIRANTFSSLTSLRRLFLQHNAIS 418
Query: 112 ALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLK 171
+ +F+ L EL LDL +N++S ++ F +LE L LSFN I + FS L+
Sbjct: 419 TIEDQSFRELHELLELDLKHNRLSHLSPQLFVGLSNLEYLFLSFNQIMDISQNT-FSPLR 477
Query: 172 SLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIET 211
L L L +NQ+ + N V++ L + L YL L N +ET
Sbjct: 478 RLFWLDLSHNQLATLDNAVITQLAN--LRYLSLRNNSLET 515
Score = 122 (48.0 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 38/131 (29%), Positives = 64/131 (48%)
Query: 33 LEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSF--YIELRSLDLSVNKINVLG 90
LE SC + ++ + L+ N IS + SF EL LDL N+++ L
Sbjct: 388 LEHSCLSK-IRANTFSSLTSLRRLFLQHNAISTIE-DQSFRELHELLELDLKHNRLSHLS 445
Query: 91 SHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLEL 150
F + L L +S+N+I +S++TF L+ L LDLS+N+++ ++ +L
Sbjct: 446 PQLFVGLSNLEYLFLSFNQIMDISQNTFSPLRRLFWLDLSHNQLATLDNAVITQLANLRY 505
Query: 151 LILSFNNITYF 161
L L N++ F
Sbjct: 506 LSLRNNSLETF 516
Score = 95 (38.5 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 43/161 (26%), Positives = 69/161 (42%)
Query: 52 EVQTIILRENRISNVHYTLSFYIELRSLD---LSVNKINVLGSHNFEYQNKLLNLNISYN 108
E+ + L+ NR+S H + ++ L +L+ LS N+I + + F +L L++S+N
Sbjct: 430 ELLELDLKHNRLS--HLSPQLFVGLSNLEYLFLSFNQIMDISQNTFSPLRRLFWLDLSHN 487
Query: 109 EISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFS 168
+++ L L L+ L L N + + + LE L L NN
Sbjct: 488 QLATLDNAVITQLANLRYLSLRNNSLETFSVGFLCPSFTLEQLWLGGNNW------HCNC 541
Query: 169 SLKSLRILKLDNNQILDVPNNVLSNLPHQSLHY-LYLNENL 208
SLK LR L + + VP V S H +Y NL
Sbjct: 542 SLKGLRDFALRHPTV--VPRFVQSVAEGDDSHVPIYTYNNL 580
Score = 70 (29.7 bits), Expect = 2.6e-24, Sum P(2) = 2.6e-24
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 501 NNHSLTIVLNNLKCSSPPDIKGLEVKAV-PENSVHC 535
++H NNL C PP + GL+++ + EN HC
Sbjct: 569 DSHVPIYTYNNLTCCHPPSLVGLDLRDIREENFAHC 604
>UNIPROTKB|F1MJZ4 [details] [associations]
symbol:IGFALS "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005634 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GeneTree:ENSGT00690000101816 EMBL:DAAA02057304
IPI:IPI00807324 Ensembl:ENSBTAT00000047326 OMA:FCGLGEL
Uniprot:F1MJZ4
Length = 610
Score = 275 (101.9 bits), Expect = 1.1e-23, Sum P(2) = 1.1e-23
Identities = 102/376 (27%), Positives = 155/376 (41%)
Query: 79 LDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVIN 138
L L N+++ L +H F + L +L +S N +S L + F+GL L L+L +N ++V+
Sbjct: 131 LHLEHNRLHALAAHTFLHTPGLASLGLSNNLLSRLDEGLFRGLAHLWDLNLGWNSLTVLP 190
Query: 139 KTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQS 198
TAF+ L L+L+ N + Y + +F L LR L L N + V NV LP
Sbjct: 191 DTAFQGLAGLRELVLAGNKLAYLQPP-LFCGLGELRELDLSRNTLRSVKANVFVKLP--K 247
Query: 199 LHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXX 258
L LYL+ NL+ V +F + L L L L LH
Sbjct: 248 LQKLYLDHNLVAAVAPGAF-LGMKALRWLDLSHNRVGSLLEDSFPGLLGLHVLRLSHNVL 306
Query: 259 XAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQXXXXXX 318
+ + L L L L N + AF L L+++ +N L +
Sbjct: 307 AGLRPRTFKDLHFLEELQLGHNRLRQLPEEAFAGLGQLEVLALN-DNQLQELRPGGFLGL 365
Query: 319 XXXXXXXXXXXAFSLTP----LGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIP 374
P G K L L G + + +AF L L+ ++ L
Sbjct: 366 RNLAVLNLSSNCLRDLPERAFQGLAKLHSLHLEGGCLARLGPLAFAGLSGLR--RLFLKG 423
Query: 375 N-LDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHF 433
N + +D+R+ +L + + N L LP +LFQ L+ + L N LS L A
Sbjct: 424 NSIADVDERSLGGLAELLELDLTANQ-LTHLPGRLFQDLGRLEYLLLARNRLSALPADAL 482
Query: 434 -PLERISFLDLSDNPL 448
PL+R +LD+S N L
Sbjct: 483 GPLQRTFWLDVSHNRL 498
Score = 227 (85.0 bits), Expect = 3.3e-18, Sum P(2) = 3.3e-18
Identities = 105/400 (26%), Positives = 170/400 (42%)
Query: 58 LRENRISNVH-YTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKD 116
L NR+ + +T L SL LS N ++ L F L +LN+ +N ++ L
Sbjct: 133 LEHNRLHALAAHTFLHTPGLASLGLSNNLLSRLDEGLFRGLAHLWDLNLGWNSLTVLPDT 192
Query: 117 TFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRIL 176
F+GL L+ L L+ NK++ + F L L LS N + + + +F L L+ L
Sbjct: 193 AFQGLAGLRELVLAGNKLAYLQPPLFCGLGELRELDLSRNTLRSVK-ANVFVKLPKLQKL 251
Query: 177 KLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXX 236
LD+N + V + ++L +L L+ N + ++L++SFP L LH L L
Sbjct: 252 YLDHNLVAAVAPGAFLGM--KALRWLDLSHNRVGSLLEDSFP-GLLGLHVLRLSHNVLAG 308
Query: 237 XXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSL 296
L L +P + + L L L L+ N + F L +L
Sbjct: 309 LRPRTFKDLHFLEELQLGHNRLRQLPEEAFAGLGQLEVLALNDNQLQELRPGGFLGLRNL 368
Query: 297 KLVKINLIPN-LDSIDQXXXXXXXXXXXXXXXXXAFS-LTPL---GTLKCDRLDLSGNNF 351
+ +NL N L + + + L PL G RL L GN+
Sbjct: 369 AV--LNLSSNCLRDLPERAFQGLAKLHSLHLEGGCLARLGPLAFAGLSGLRRLFLKGNSI 426
Query: 352 SNIDSVAFKSLFSL-KLVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNLKQLPSKLF 409
+++D +SL L +L++++L N L + R F D +LE +++ N L LP+
Sbjct: 427 ADVDE---RSLGGLAELLELDLTANQLTHLPGRLFQDLGRLEYLLLARN-RLSALPADAL 482
Query: 410 QGNTNLKSVSLKGNSLSHLEASHF-PLERISFLDLSDNPL 448
+ + N L L A+ PL R+ FL L +N L
Sbjct: 483 GPLQRTFWLDVSHNRLEALPAAALAPLSRLRFLSLRNNSL 522
Score = 201 (75.8 bits), Expect = 2.7e-15, Sum P(2) = 2.7e-15
Identities = 82/325 (25%), Positives = 141/325 (43%)
Query: 53 VQTIILRENRISNVHYTLSFYI-ELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEIS 111
++ ++L N+++ + L + ELR LDLS N + + ++ F KL L + +N ++
Sbjct: 200 LRELVLAGNKLAYLQPPLFCGLGELRELDLSRNTLRSVKANVFVKLPKLQKLYLDHNLVA 259
Query: 112 ALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLK 171
A++ F G+K L+ LDLS+N++ + + +F L L +L LS N + F L
Sbjct: 260 AVAPGAFLGMKALRWLDLSHNRVGSLLEDSFPGLLGLHVLRLSHNVLAGLRP-RTFKDLH 318
Query: 172 SLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXX 231
L L+L +N++ +P + L L L LN+N ++ + F L NL L L
Sbjct: 319 FLEELQLGHNRLRQLPEEAFAGLGQ--LEVLALNDNQLQELRPGGF-LGLRNLAVLNLSS 375
Query: 232 XXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFK 291
L LH + + LS L L L GN+ +++D +
Sbjct: 376 NCLRDLPERAFQGLAKLHSLHLEGGCLARLGPLAFAGLSGLRRLFLKGNSIADVDE---R 432
Query: 292 SLFSL-KLVKINLIPN-LDSIDQXXXXXXXXXXXXXXXXXAFSLTP---LGTL-KCDRLD 345
SL L +L++++L N L + S P LG L + LD
Sbjct: 433 SLGGLAELLELDLTANQLTHLPGRLFQDLGRLEYLLLARNRLSALPADALGPLQRTFWLD 492
Query: 346 LSGNNFSNIDSVAFKSLFSLKLVKI 370
+S N + + A L L+ + +
Sbjct: 493 VSHNRLEALPAAALAPLSRLRFLSL 517
Score = 189 (71.6 bits), Expect = 5.8e-14, Sum P(2) = 5.8e-14
Identities = 105/439 (23%), Positives = 171/439 (38%)
Query: 22 CPSRCQC----FDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSFYIE-L 76
CP+ C C F +L C+ L +P L P + + L N S++ + L
Sbjct: 45 CPAVCSCGHDDFTDELSVFCSSRNLTQLPGGLPPGTRALWLDGNNFSSIPAAAFRNLSGL 104
Query: 77 RSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISV 136
L+L + + L L +L++ +N + AL+ TF L +L LS N +S
Sbjct: 105 GFLNLQGSGLASLEPQALLGLRGLCHLHLEHNRLHALAAHTFLHTPGLASLGLSNNLLSR 164
Query: 137 INKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPH 196
+++ FR HL L L +N++T D+ F L LR L L N++ + + L
Sbjct: 165 LDEGLFRGLAHLWDLNLGWNSLTVLPDTA-FQGLAGLRELVLAGNKLAYLQPPLFCGLGE 223
Query: 197 QSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXX 256
L L L+ N + +V N F L L L L + ++ L
Sbjct: 224 --LRELDLSRNTLRSVKANVF-VKLPKLQKLYLDHNLVAAVAPGAFLGMKALRWLDLSHN 280
Query: 257 XXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKI--NLIPNLDSIDQXX 314
++ L L L LS N + + FK L L+ +++ N + L ++
Sbjct: 281 RVGSLLEDSFPGLLGLHVLRLSHNVLAGLRPRTFKDLHFLEELQLGHNRLRQLP--EEAF 338
Query: 315 XXXXXXXXXXXXXXXAFSLTP---LGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKIN 371
L P LG L+LS N ++ AF+ L KL ++
Sbjct: 339 AGLGQLEVLALNDNQLQELRPGGFLGLRNLAVLNLSSNCLRDLPERAFQGL--AKLHSLH 396
Query: 372 LIPN-LDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEA 430
L L + AF L + + N ++ + + G L + L N L+HL
Sbjct: 397 LEGGCLARLGPLAFAGLSGLRRLFLKGN-SIADVDERSLGGLAELLELDLTANQLTHLPG 455
Query: 431 SHFP-LERISFLDLSDNPL 448
F L R+ +L L+ N L
Sbjct: 456 RLFQDLGRLEYLLLARNRL 474
Score = 106 (42.4 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 31/110 (28%), Positives = 54/110 (49%)
Query: 53 VQTIILRENRISNV-HYTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEIS 111
++ + L+ N I++V +L EL LDL+ N++ L F+ +L L ++ N +S
Sbjct: 416 LRRLFLKGNSIADVDERSLGGLAELLELDLTANQLTHLPGRLFQDLGRLEYLLLARNRLS 475
Query: 112 ALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYF 161
AL D L+ LD+S+N++ + A L L L N++ F
Sbjct: 476 ALPADALGPLQRTFWLDVSHNRLEALPAAALAPLSRLRFLSLRNNSLRTF 525
Score = 70 (29.7 bits), Expect = 1.1e-23, Sum P(2) = 1.1e-23
Identities = 12/30 (40%), Positives = 20/30 (66%)
Query: 507 IVLNNLKCSSPPDIKGLEVKAVPE-NSVHC 535
+ NN+ C+SPP + GL+++ V E + HC
Sbjct: 581 LAYNNITCASPPSLAGLDLRDVGEAHFAHC 610
>UNIPROTKB|F1PSS7 [details] [associations]
symbol:SLIT1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005576 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 Pfam:PF12661 Pfam:PF01463 GeneTree:ENSGT00700000104083
OMA:KCVHGKC EMBL:AAEX03015440 Ensembl:ENSCAFT00000014303
Uniprot:F1PSS7
Length = 1534
Score = 218 (81.8 bits), Expect = 1.4e-23, Sum P(4) = 1.4e-23
Identities = 58/199 (29%), Positives = 97/199 (48%)
Query: 8 IFLILALTKLNKAICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVH 67
+ L A +L CP+ C C ++ C AGL+ +P + + + L N I+ +H
Sbjct: 20 LLLWAAAWRLGATACPALCTCTGATVD--CHGAGLQAIPKNIPRSTERLELNGNNITRIH 77
Query: 68 YTLSFYI-ELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKT 126
+ +LR L L N+I V+ F+ +L L ++ N++ L + F+ + L
Sbjct: 78 KNDFVGLKQLRVLQLMENQIGVVERGAFDDMKELERLRLNRNQLHTLPELLFQNNQALSR 137
Query: 127 LDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDV 186
LDLS N I I + AFR L+ L L N I+ E+ F +L+ L +L L+NN I +
Sbjct: 138 LDLSENTIQAIPRKAFRGATDLKNLQLDKNQISCIEEGA-FRALRGLEVLTLNNNNITTI 196
Query: 187 PNNVLSNLPHQSLHYLYLN 205
P + +++P L+ N
Sbjct: 197 PVSSFNHMPKLRTFRLHSN 215
Score = 183 (69.5 bits), Expect = 1.1e-19, Sum P(4) = 1.1e-19
Identities = 56/170 (32%), Positives = 86/170 (50%)
Query: 17 LNKAICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRE-NRISNVHY-TLSFYI 74
L+ CP+ C C + ++ C GL +P L PE T I E N I ++ S Y
Sbjct: 277 LSSGSCPAMCSCSNGIVD--CRGKGLTAIPANL-PETMTEIRLELNGIKSIPPGAFSPYR 333
Query: 75 ELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKI 134
+LR +DLS N+I + F+ L +L + N+I+ L + F GL L+ L L+ NKI
Sbjct: 334 KLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLNANKI 393
Query: 135 SVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQIL 184
+ + AF+D +L LL L N I F+SL++++ L L N +
Sbjct: 394 NCVRPDAFQDLQNLSLLSLYDNKIQSLAKGT-FTSLRAIQTLHLAQNPFI 442
Score = 173 (66.0 bits), Expect = 9.2e-09, Sum P(2) = 9.2e-09
Identities = 43/135 (31%), Positives = 68/135 (50%)
Query: 22 CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSFYIELRSLDL 81
CP C C D + C++ L V+P + V + L N+ + V LS + L+ +DL
Sbjct: 734 CPQECACLDTVVR--CSNKHLHVLPKGIPKNVTELYLDGNQFTLVPGQLSTFKYLQLVDL 791
Query: 82 SVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTA 141
S NKI+ L + +F ++L L +SYN + + F+GL+ L+ L L N IS + +
Sbjct: 792 SNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLHGNDISTLREGI 851
Query: 142 FRDTLHLELLILSFN 156
F D L L + N
Sbjct: 852 FTDVTSLSHLAIGAN 866
Score = 171 (65.3 bits), Expect = 2.1e-17, Sum P(3) = 2.1e-17
Identities = 47/161 (29%), Positives = 81/161 (50%)
Query: 20 AICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSF--YIELR 77
A+CP +C+C + L A C+ L +P ++ + L N IS + T F L+
Sbjct: 511 AVCPHKCRC-EASL-AECSSLKLTKIPERIPQSTAELRLNNNEISILEATGIFKKLTHLK 568
Query: 78 SLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVI 137
++LS NK++ + FE + L+++ N++ ++ F+GL L+TL L N+IS I
Sbjct: 569 KINLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCI 628
Query: 138 NKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKL 178
+ +F ++ LL L N I F +L++L L L
Sbjct: 629 HNDSFTGLRNVRLLSLYDNQIATISPGA-FDTLQALSTLNL 668
Score = 162 (62.1 bits), Expect = 2.3e-17, Sum P(4) = 2.3e-17
Identities = 45/133 (33%), Positives = 70/133 (52%)
Query: 52 EVQTIILRENRISNVHY-TLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEI 110
+++ + L EN+I V EL L L+ N+++ L F+ L L++S N I
Sbjct: 86 QLRVLQLMENQIGVVERGAFDDMKELERLRLNRNQLHTLPELLFQNNQALSRLDLSENTI 145
Query: 111 SALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSL 170
A+ + F+G +LK L L N+IS I + AFR LE+L L+ NNIT S F+ +
Sbjct: 146 QAIPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNITTIPVSS-FNHM 204
Query: 171 KSLRILKLDNNQI 183
LR +L +N +
Sbjct: 205 PKLRTFRLHSNHL 217
Score = 132 (51.5 bits), Expect = 1.4e-23, Sum P(4) = 1.4e-23
Identities = 41/122 (33%), Positives = 64/122 (52%)
Query: 335 PLGTLK-CDRLDLSGNNFSNIDSVAFKSLFS-LKLVKINLIPNLDSIDQRAFVDNIQLET 392
P G K L L GN F+ + S F L+LV ++ + S+ +F + QL T
Sbjct: 756 PKGIPKNVTELYLDGNQFTLVPGQL--STFKYLQLVDLSN-NKISSLSNSSFTNMSQLTT 812
Query: 393 VIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPLHCD 451
+I++ N L+ +P FQG +L+ +SL GN +S L F + +S L + NPL+CD
Sbjct: 813 LILSYNA-LQCIPPLAFQGLRSLRLLSLHGNDISTLREGIFTDVTSLSHLAIGANPLYCD 871
Query: 452 CN 453
C+
Sbjct: 872 CH 873
Score = 131 (51.2 bits), Expect = 5.3e-14, Sum P(4) = 5.3e-14
Identities = 39/127 (30%), Positives = 62/127 (48%)
Query: 103 LNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFE 162
L ++ N I+ + K+ F GLK+L+ L L N+I V+ + AF D LE L L+ N +
Sbjct: 66 LELNGNNITRIHKNDFVGLKQLRVLQLMENQIGVVERGAFDDMKELERLRLNRNQLHTLP 125
Query: 163 DSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLT 222
+ +F + ++L L L N I +P L L L++N I + + +F L
Sbjct: 126 EL-LFQNNQALSRLDLSENTIQAIPRKAFRGAT--DLKNLQLDKNQISCIEEGAFR-ALR 181
Query: 223 NLHTLAL 229
L L L
Sbjct: 182 GLEVLTL 188
Score = 115 (45.5 bits), Expect = 7.7e-21, Sum P(3) = 7.7e-21
Identities = 37/116 (31%), Positives = 53/116 (45%)
Query: 340 KCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINEN 398
K R+DLS N + I AF+ L SL + L N + + + F L+ +++N N
Sbjct: 334 KLRRIDLSNNQIAEIAPDAFQGLRSLN--SLVLYGNKITDLPRGVFGGLYTLQLLLLNAN 391
Query: 399 MNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPLHCDCN 453
+ + FQ NL +SL N + L F L I L L+ NP CDCN
Sbjct: 392 -KINCVRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQNPFICDCN 446
Score = 109 (43.4 bits), Expect = 4.9e-21, Sum P(4) = 4.9e-21
Identities = 32/112 (28%), Positives = 59/112 (52%)
Query: 343 RLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNL 401
+++LS N S I+ AF+ S+ +++L N L+SI F L T+++ N +
Sbjct: 569 KINLSNNKVSEIEDGAFEGAASVS--ELHLTANQLESIRSGMFRGLDGLRTLMLRNN-RI 625
Query: 402 KQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPLHCDC 452
+ + F G N++ +SL N ++ + F L+ +S L+L NP +C+C
Sbjct: 626 SCIHNDSFTGLRNVRLLSLYDNQIATISPGAFDTLQALSTLNLLANPFNCNC 677
Score = 103 (41.3 bits), Expect = 3.3e-11, Sum P(4) = 3.3e-11
Identities = 44/133 (33%), Positives = 55/133 (41%)
Query: 121 LKELKT-LDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLD 179
L E T + L N I I AF L + LS N I + F L+SL L L
Sbjct: 307 LPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAP-DAFQGLRSLNSLVLY 365
Query: 180 NNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXX 239
N+I D+P V L +L L LN N I V ++F L NL L+L
Sbjct: 366 GNKITDLPRGVFGGL--YTLQLLLLNANKINCVRPDAFQ-DLQNLSLLSLYDNKIQSLAK 422
Query: 240 XXXVTLR---TLH 249
+LR TLH
Sbjct: 423 GTFTSLRAIQTLH 435
Score = 103 (41.3 bits), Expect = 3.0e-10, Sum P(3) = 3.0e-10
Identities = 43/151 (28%), Positives = 69/151 (45%)
Query: 12 LALTKLNKAICPSRCQCFDQKLEASCTDA-GLEVVPIQLNPEVQTIILRENRISNVHY-T 69
L LTK+ + I S + E S +A G+ + ++ I L N++S +
Sbjct: 529 LKLTKIPERIPQSTAELRLNNNEISILEATGI----FKKLTHLKKINLSNNKVSEIEDGA 584
Query: 70 LSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDL 129
+ L L+ N++ + S F + L L + N IS + D+F GL+ ++ L L
Sbjct: 585 FEGAASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSL 644
Query: 130 SYNKISVINKTAFRDTLH----LELLILSFN 156
N+I+ I+ AF DTL L LL FN
Sbjct: 645 YDNQIATISPGAF-DTLQALSTLNLLANPFN 674
Score = 91 (37.1 bits), Expect = 4.9e-09, Sum P(3) = 4.9e-09
Identities = 33/133 (24%), Positives = 51/133 (38%)
Query: 151 LILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIE 210
L L+ N I+ E + IF L L+ + L NN++ ++ + S+ L+L N +E
Sbjct: 545 LRLNNNEISILEATGIFKKLTHLKKINLSNNKVSEIEDGAFEGAA--SVSELHLTANQLE 602
Query: 211 TVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLS 270
++ F L L TL L LR + I L
Sbjct: 603 SIRSGMFR-GLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIATISPGAFDTLQ 661
Query: 271 ALVNLDLSGNNFS 283
AL L+L N F+
Sbjct: 662 ALSTLNLLANPFN 674
Score = 86 (35.3 bits), Expect = 1.6e-08, Sum P(3) = 1.6e-08
Identities = 45/177 (25%), Positives = 66/177 (37%)
Query: 126 TLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILD 185
T+D + I K R T LEL + NNIT ++ F LK LR+L+L NQI
Sbjct: 44 TVDCHGAGLQAIPKNIPRSTERLEL---NGNNITRIHKND-FVGLKQLRVLQLMENQIGV 99
Query: 186 VPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTL 245
V ++ + L L LN N + T+ + F L L L
Sbjct: 100 VERGAFDDM--KELERLRLNRNQLHTLPELLFQNNQA-LSRLDLSENTIQAIPRKAFRGA 156
Query: 246 RTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
L I L L L L+ NN + I +F + L+ +++
Sbjct: 157 TDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLH 213
Score = 58 (25.5 bits), Expect = 3.5e-11, Sum P(3) = 3.5e-11
Identities = 18/62 (29%), Positives = 34/62 (54%)
Query: 168 SSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTL 227
S+ K L+++ L NN+I + N+ +N+ L L L+ N ++ + +F L +L L
Sbjct: 781 STFKYLQLVDLSNNKISSLSNSSFTNM--SQLTTLILSYNALQCIPPLAFQ-GLRSLRLL 837
Query: 228 AL 229
+L
Sbjct: 838 SL 839
Score = 54 (24.1 bits), Expect = 1.7e-15, Sum P(4) = 1.7e-15
Identities = 19/87 (21%), Positives = 40/87 (45%)
Query: 337 GTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFVDNIQLETVIIN 396
G + L L GN +++ F L++L+L+ +N ++ + AF D L + +
Sbjct: 355 GLRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLNA-NKINCVRPDAFQDLQNLSLLSLY 413
Query: 397 ENMNLKQLPSKLFQGNTNLKSVSLKGN 423
+N ++ L F ++++ L N
Sbjct: 414 DN-KIQSLAKGTFTSLRAIQTLHLAQN 439
Score = 53 (23.7 bits), Expect = 1.7e-14, Sum P(3) = 1.7e-14
Identities = 15/59 (25%), Positives = 26/59 (44%)
Query: 244 TLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
T + L ++ + +S L L LS N I +AF+ L SL+L+ ++
Sbjct: 782 TFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLH 840
Score = 52 (23.4 bits), Expect = 1.4e-23, Sum P(4) = 1.4e-23
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 268 KLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSI 310
KL+ L ++LS N S I+ AF+ S+ +++L N L+SI
Sbjct: 563 KLTHLKKINLSNNKVSEIEDGAFEGAASVS--ELHLTANQLESI 604
Score = 50 (22.7 bits), Expect = 2.3e-23, Sum P(4) = 2.3e-23
Identities = 14/37 (37%), Positives = 18/37 (48%)
Query: 260 AIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSL 296
+IP S L +DLS N + I AF+ L SL
Sbjct: 323 SIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSL 359
Score = 48 (22.0 bits), Expect = 3.6e-23, Sum P(4) = 3.6e-23
Identities = 11/34 (32%), Positives = 21/34 (61%)
Query: 269 LSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
L +L +L L GN +++ F L++L+L+ +N
Sbjct: 356 LRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLN 389
Score = 48 (22.0 bits), Expect = 9.5e-14, Sum P(2) = 9.5e-14
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 513 KCSSPPDIKGLEVKAVPENSVHC 535
+CS P ++GL V V ++ C
Sbjct: 241 QCSGPASLRGLNVAEVQKSEFSC 263
Score = 47 (21.6 bits), Expect = 1.4e-23, Sum P(4) = 1.4e-23
Identities = 7/24 (29%), Positives = 12/24 (50%)
Query: 513 KCSSPPDIKGLEVKAVPENSVHCE 536
+C PPD++G + P C+
Sbjct: 892 RCVGPPDMEGKLLLTTPAKKFECQ 915
Score = 47 (21.6 bits), Expect = 7.0e-14, Sum P(3) = 7.0e-14
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 265 QLSKLSALVNLDLSGNNFSNIDSVAFKSLFSL 296
QLS L +DLS N S++ + +F ++ L
Sbjct: 779 QLSTFKYLQLVDLSNNKISSLSNSSFTNMSQL 810
Score = 44 (20.5 bits), Expect = 1.4e-13, Sum P(3) = 1.4e-13
Identities = 23/97 (23%), Positives = 39/97 (40%)
Query: 419 SLKGNSLSHLEASHFPLE------RISFLDLSDN--PLHCDCNXXXXX---XXXXXXXKS 467
SL+G +++ ++ S F R+ LS P C C+ +
Sbjct: 247 SLRGLNVAEVQKSEFSCSGQGEAGRVPSCTLSSGSCPAMCSCSNGIVDCRGKGLTAIPAN 306
Query: 468 TMETTT-VAYEMTSNTSISPGTTTEAQRVDRI-IKNN 502
ET T + E+ SI PG + +++ RI + NN
Sbjct: 307 LPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNN 343
Score = 39 (18.8 bits), Expect = 3.2e-20, Sum P(4) = 3.2e-20
Identities = 8/30 (26%), Positives = 15/30 (50%)
Query: 507 IVLNNLKCSSPPDIKGLEVKAVPENSVHCE 536
IV N +C +P ++ + ++ V CE
Sbjct: 691 IVTGNPRCQNPDFLRQIPLQDVAFPDFRCE 720
>UNIPROTKB|O94813 [details] [associations]
symbol:SLIT2 "Slit homolog 2 protein" species:9606 "Homo
sapiens" [GO:0001656 "metanephros development" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0010629 "negative regulation of gene expression"
evidence=IEA] [GO:0016337 "cell-cell adhesion" evidence=IEA]
[GO:0033563 "dorsal/ventral axon guidance" evidence=IEA]
[GO:0045499 "chemorepellent activity" evidence=IEA] [GO:0060763
"mammary duct terminal end bud growth" evidence=IEA] [GO:0001657
"ureteric bud development" evidence=IMP] [GO:0050929 "induction of
negative chemotaxis" evidence=IDA] [GO:0050772 "positive regulation
of axonogenesis" evidence=TAS] [GO:0005615 "extracellular space"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0031290
"retinal ganglion cell axon guidance" evidence=IDA] [GO:0009986
"cell surface" evidence=IDA] [GO:0048495 "Roundabout binding"
evidence=IPI] [GO:0043237 "laminin-1 binding" evidence=IDA]
[GO:0042803 "protein homodimerization activity" evidence=IDA]
[GO:0050919 "negative chemotaxis" evidence=IDA;IMP] [GO:0030336
"negative regulation of cell migration" evidence=IMP;IDA]
[GO:0048754 "branching morphogenesis of an epithelial tube"
evidence=IDA;IMP] [GO:0010593 "negative regulation of lamellipodium
assembly" evidence=IDA] [GO:0005095 "GTPase inhibitor activity"
evidence=IDA] [GO:0051058 "negative regulation of small GTPase
mediated signal transduction" evidence=IDA] [GO:0016020 "membrane"
evidence=NAS] [GO:0010596 "negative regulation of endothelial cell
migration" evidence=IDA] [GO:0043116 "negative regulation of
vascular permeability" evidence=IDA] [GO:0005509 "calcium ion
binding" evidence=NAS] [GO:0090024 "negative regulation of
neutrophil chemotaxis" evidence=IDA] [GO:0030837 "negative
regulation of actin filament polymerization" evidence=IDA]
[GO:0001933 "negative regulation of protein phosphorylation"
evidence=IDA] [GO:0002689 "negative regulation of leukocyte
chemotaxis" evidence=IDA] [GO:0043394 "proteoglycan binding"
evidence=IPI] [GO:0048846 "axon extension involved in axon
guidance" evidence=IDA] [GO:0071504 "cellular response to heparin"
evidence=IDA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IMP] [GO:0090260 "negative regulation of retinal
ganglion cell axon guidance" evidence=IDA] [GO:0061364 "apoptotic
process involved in luteolysis" evidence=IEP] [GO:0032870 "cellular
response to hormone stimulus" evidence=IEP] [GO:0051414 "response
to cortisol stimulus" evidence=IEP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008045 "motor neuron axon guidance"
evidence=IDA] [GO:0021836 "chemorepulsion involved in postnatal
olfactory bulb interneuron migration" evidence=IDA] [GO:0008201
"heparin binding" evidence=IDA] [GO:0007411 "axon guidance"
evidence=IDA;TAS] [GO:0021834 "chemorepulsion involved in embryonic
olfactory bulb interneuron precursor migration" evidence=IDA]
[GO:0005576 "extracellular region" evidence=TAS] [GO:0005886
"plasma membrane" evidence=TAS] [GO:0035385 "Roundabout signaling
pathway" evidence=IC;IMP] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IMP] [GO:0030308
"negative regulation of cell growth" evidence=IMP] [GO:0090027
"negative regulation of monocyte chemotaxis" evidence=ISS]
[GO:0014912 "negative regulation of smooth muscle cell migration"
evidence=IDA] [GO:0002042 "cell migration involved in sprouting
angiogenesis" evidence=IMP] [GO:0071672 "negative regulation of
smooth muscle cell chemotaxis" evidence=IDA] [GO:0071676 "negative
regulation of mononuclear cell migration" evidence=IDA] [GO:0090288
"negative regulation of cellular response to growth factor
stimulus" evidence=IDA] [GO:0021972 "corticospinal neuron axon
guidance through spinal cord" evidence=IMP] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005886 GO:GO:0005737 Reactome:REACT_111045 GO:GO:0008285
GO:GO:0005615 GO:GO:0042803 GO:GO:0009986 GO:GO:0030308
GO:GO:0001701 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0008201
Pathway_Interaction_DB:glypican_1pathway GO:GO:0005509
GO:GO:0043116 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0043065 GO:GO:0008045 GO:GO:0071504
GO:GO:0050772 GO:GO:0005095 Reactome:REACT_96538 GO:GO:0016337
PROSITE:PS01186 GO:GO:0032870 GO:GO:0030837 GO:GO:0010629
InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 GO:GO:0071672 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 EMBL:CH471069 GO:GO:0001656
GO:GO:0010596 GO:GO:0001657 GO:GO:0001933 GO:GO:0048754
GO:GO:0071676 GO:GO:0031290 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
GO:GO:0060763 GO:GO:0070100 GO:GO:0090288 GO:GO:0043237
GO:GO:0033563 GO:GO:0045499 GO:GO:0002042 Pfam:PF01463
GO:GO:0090027 GO:GO:0010593 GO:GO:0051414 GO:GO:0090260 PDB:2V9T
PDBsum:2V9T GO:GO:0021836 GO:GO:0035385 GO:GO:0061364
HOGENOM:HOG000116120 HOVERGEN:HBG057959 EMBL:AB017168 EMBL:AF055585
EMBL:AF133270 EMBL:BC117190 EMBL:BC143978 IPI:IPI00006288
IPI:IPI00220114 IPI:IPI00335003 RefSeq:NP_004778.1 UniGene:Hs.29802
PDB:2V70 PDB:2V9S PDB:2WFH PDBsum:2V70 PDBsum:2V9S PDBsum:2WFH
ProteinModelPortal:O94813 SMR:O94813 DIP:DIP-38198N IntAct:O94813
MINT:MINT-6768470 STRING:O94813 PhosphoSite:O94813 PaxDb:O94813
PRIDE:O94813 Ensembl:ENST00000503823 Ensembl:ENST00000503837
Ensembl:ENST00000504154 GeneID:9353 KEGG:hsa:9353 UCSC:uc003gpr.1
UCSC:uc003gps.1 CTD:9353 GeneCards:GC04P020254 HGNC:HGNC:11086
HPA:CAB007590 HPA:HPA019511 HPA:HPA023088 MIM:603746
neXtProt:NX_O94813 PharmGKB:PA35939 InParanoid:O94813 KO:K06839
PhylomeDB:O94813 EvolutionaryTrace:O94813 GenomeRNAi:9353
NextBio:35025 ArrayExpress:O94813 Bgee:O94813 CleanEx:HS_SLIT2
Genevestigator:O94813 GermOnline:ENSG00000145147 GO:GO:0021972
GO:GO:0050929 GO:GO:0090024 GO:GO:0051058 Uniprot:O94813
Length = 1529
Score = 208 (78.3 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 49/135 (36%), Positives = 73/135 (54%)
Query: 22 CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSFYIELRSLDL 81
CP+ C C D + C++ GL+V+P + +V + L N+ + V LS Y L +DL
Sbjct: 727 CPTECTCLDTVVR--CSNKGLKVLPKGIPRDVTELYLDGNQFTLVPKELSNYKHLTLIDL 784
Query: 82 SVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTA 141
S N+I+ L + +F +LL L +SYN + + TF GLK L+ L L N ISV+ + A
Sbjct: 785 SNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGA 844
Query: 142 FRDTLHLELLILSFN 156
F D L L + N
Sbjct: 845 FNDLSALSHLAIGAN 859
Score = 204 (76.9 bits), Expect = 4.0e-23, Sum P(4) = 4.0e-23
Identities = 60/201 (29%), Positives = 97/201 (48%)
Query: 10 LILA-LTKLNKAICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHY 68
L+LA L K+ CP++C C ++ C L VP + + + L N I+ +
Sbjct: 15 LVLAILNKVAPQACPAQCSCSGSTVD--CHGLALRSVPRNIPRNTERLDLNGNNITRITK 72
Query: 69 T-LSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTL 127
T + LR L L NKI+ + F+ +L L ++ N + + F G +L L
Sbjct: 73 TDFAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTAKLYRL 132
Query: 128 DLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVP 187
DLS N+I I + AFR + ++ L L +N I+ ED F +L+ L +L L+NN I +
Sbjct: 133 DLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGA-FRALRDLEVLTLNNNNITRLS 191
Query: 188 NNVLSNLPHQSLHYLYLNENL 208
+++P L+ N NL
Sbjct: 192 VASFNHMPKLRTFRLHSN-NL 211
Score = 182 (69.1 bits), Expect = 4.7e-19, Sum P(4) = 4.7e-19
Identities = 52/164 (31%), Positives = 83/164 (50%)
Query: 22 CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHY-TLSFYIELRSLD 80
CP+ C C + ++ C GL +P L + I L +N I + S Y +LR +D
Sbjct: 273 CPAACTCSNNIVD--CRGKGLTEIPTNLPETITEIRLEQNTIKVIPPGAFSPYKKLRRID 330
Query: 81 LSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKT 140
LS N+I+ L F+ L +L + N+I+ L K F+GL L+ L L+ NKI+ +
Sbjct: 331 LSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVD 390
Query: 141 AFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQIL 184
AF+D +L LL L N + FS L++++ + L N +
Sbjct: 391 AFQDLHNLNLLSLYDNKLQTIAKGT-FSPLRAIQTMHLAQNPFI 433
Score = 160 (61.4 bits), Expect = 1.2e-16, Sum P(4) = 1.2e-16
Identities = 44/151 (29%), Positives = 76/151 (50%)
Query: 76 LRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKIS 135
+ + L N I V+ F KL +++S N+IS L+ D F+GL+ L +L L NKI+
Sbjct: 302 ITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKIT 361
Query: 136 VINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLP 195
+ K+ F L+LL+L+ N I + F L +L +L L +N++ + S P
Sbjct: 362 ELPKSLFEGLFSLQLLLLNANKINCLR-VDAFQDLHNLNLLSLYDNKLQTIAKGTFS--P 418
Query: 196 HQSLHYLYLNENLIETVLDNSFPFTLTNLHT 226
+++ ++L +N + D + LHT
Sbjct: 419 LRAIQTMHLAQNPF--ICDCHLKWLADYLHT 447
Score = 146 (56.5 bits), Expect = 1.3e-16, Sum P(4) = 1.3e-16
Identities = 42/127 (33%), Positives = 63/127 (49%)
Query: 103 LNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFE 162
L+++ N I+ ++K F GL+ L+ L L NKIS I + AF+D LE L L+ N++ F
Sbjct: 60 LDLNGNNITRITKTDFAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNHLQLFP 119
Query: 163 DSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLT 222
+ + K R L L NQI +P + L L+ N I + D +F L
Sbjct: 120 ELLFLGTAKLYR-LDLSENQIQAIPRKAFRGAV--DIKNLQLDYNQISCIEDGAFR-ALR 175
Query: 223 NLHTLAL 229
+L L L
Sbjct: 176 DLEVLTL 182
Score = 144 (55.7 bits), Expect = 5.4e-15, Sum P(3) = 5.4e-15
Identities = 44/159 (27%), Positives = 72/159 (45%)
Query: 22 CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSF--YIELRSL 79
CP +C+C + C++ L +P + + L N + + T F +LR +
Sbjct: 506 CPEKCRC--EGTTVDCSNQKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKI 563
Query: 80 DLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINK 139
+ S NKI + FE + + + ++ N + + FKGL+ LKTL L N+I+ +
Sbjct: 564 NFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGN 623
Query: 140 TAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKL 178
+F + LL L N IT F +L SL L L
Sbjct: 624 DSFIGLSSVRLLSLYDNQITTVAPGA-FDTLHSLSTLNL 661
Score = 138 (53.6 bits), Expect = 4.0e-23, Sum P(4) = 4.0e-23
Identities = 39/113 (34%), Positives = 63/113 (55%)
Query: 344 LDLSGNNFSNIDSVAFKSLFSLK-LVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNL 401
L L GN F+ + K L + K L I+L N + ++ ++F + QL T+I++ N L
Sbjct: 759 LYLDGNQFTLVP----KELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN-RL 813
Query: 402 KQLPSKLFQGNTNLKSVSLKGNSLSHLEASHF-PLERISFLDLSDNPLHCDCN 453
+ +P + F G +L+ +SL GN +S + F L +S L + NPL+CDCN
Sbjct: 814 RCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCN 866
Score = 120 (47.3 bits), Expect = 1.1e-19, Sum P(3) = 1.1e-19
Identities = 37/116 (31%), Positives = 54/116 (46%)
Query: 340 KCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINEN 398
K R+DLS N S + AF+ L SL + L N + + + F L+ +++N N
Sbjct: 325 KLRRIDLSNNQISELAPDAFQGLRSLN--SLVLYGNKITELPKSLFEGLFSLQLLLLNAN 382
Query: 399 MNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHF-PLERISFLDLSDNPLHCDCN 453
+ L FQ NL +SL N L + F PL I + L+ NP CDC+
Sbjct: 383 -KINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCH 437
Score = 102 (41.0 bits), Expect = 3.7e-12, Sum P(4) = 3.7e-12
Identities = 33/96 (34%), Positives = 47/96 (48%)
Query: 122 KELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNN 181
+ + LDL+ N I+ I KT F HL +L L N I+ E F LK L L+L+ N
Sbjct: 55 RNTERLDLNGNNITRITKTDFAGLRHLRVLQLMENKISTIERGA-FQDLKELERLRLNRN 113
Query: 182 QILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSF 217
+ P L L L+ L L+EN I+ + +F
Sbjct: 114 HLQLFPE--LLFLGTAKLYRLDLSENQIQAIPRKAF 147
Score = 96 (38.9 bits), Expect = 7.2e-19, Sum P(4) = 7.2e-19
Identities = 30/108 (27%), Positives = 56/108 (51%)
Query: 344 LDLSGNNFSNIDSVA-FKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNL 401
L L+ N F+ +++ FK L L+ KIN N + I++ AF + +++ N L
Sbjct: 538 LRLNNNEFTVLEATGIFKKLPQLR--KINFSNNKITDIEEGAFEGASGVNEILLTSN-RL 594
Query: 402 KQLPSKLFQGNTNLKSVSLKGNSLSHLEASHF-PLERISFLDLSDNPL 448
+ + K+F+G +LK++ L+ N ++ + F L + L L DN +
Sbjct: 595 ENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQI 642
Score = 93 (37.8 bits), Expect = 1.4e-18, Sum P(4) = 1.4e-18
Identities = 27/112 (24%), Positives = 59/112 (52%)
Query: 343 RLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNL 401
+++ S N ++I+ AF+ + +I L N L+++ + F L+T+++ N +
Sbjct: 562 KINFSNNKITDIEEGAFEGASGVN--EILLTSNRLENVQHKMFKGLESLKTLMLRSN-RI 618
Query: 402 KQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPLHCDC 452
+ + F G ++++ +SL N ++ + F L +S L+L NP +C+C
Sbjct: 619 TCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNC 670
Score = 92 (37.4 bits), Expect = 1.1e-09, Sum P(3) = 1.1e-09
Identities = 39/148 (26%), Positives = 67/148 (45%)
Query: 16 KLNKAICPSRCQCFDQKLEASCTD-AGLEVVPI-QLNPEVQTIILRENRISNVHY-TLSF 72
KLNK P + +L + + LE I + P+++ I N+I+++
Sbjct: 523 KLNKI--PEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEG 580
Query: 73 YIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYN 132
+ + L+ N++ + F+ L L + N I+ + D+F GL ++ L L N
Sbjct: 581 ASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDN 640
Query: 133 KISVINKTAFRDTLH----LELLILSFN 156
+I+ + AF DTLH L LL FN
Sbjct: 641 QITTVAPGAF-DTLHSLSTLNLLANPFN 667
Score = 92 (37.4 bits), Expect = 1.1e-09, Sum P(3) = 1.1e-09
Identities = 37/158 (23%), Positives = 59/158 (37%)
Query: 126 TLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILD 185
T+D S K++ I + + T L L + N T E + IF L LR + NN+I D
Sbjct: 516 TVDCSNQKLNKIPEHIPQYTAELRL---NNNEFTVLEATGIFKKLPQLRKINFSNNKITD 572
Query: 186 VPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTL 245
+ ++ + L N +E V F L +L TL L + L
Sbjct: 573 IEEGAFEGA--SGVNEILLTSNRLENVQHKMFK-GLESLKTLMLRSNRITCVGNDSFIGL 629
Query: 246 RTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFS 283
++ + L +L L+L N F+
Sbjct: 630 SSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFN 667
Score = 85 (35.0 bits), Expect = 5.6e-09, Sum P(3) = 5.6e-09
Identities = 34/127 (26%), Positives = 49/127 (38%)
Query: 176 LKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXX 235
L L+ N I + + L H L L L EN I T+ +F L L L L
Sbjct: 60 LDLNGNNITRITKTDFAGLRH--LRVLQLMENKISTIERGAFQ-DLKELERLRLNRNHLQ 116
Query: 236 XXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFS 295
+ L+ AIP K + NL L N S I+ AF++L
Sbjct: 117 LFPELLFLGTAKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRD 176
Query: 296 LKLVKIN 302
L+++ +N
Sbjct: 177 LEVLTLN 183
Score = 84 (34.6 bits), Expect = 1.3e-13, Sum P(3) = 1.3e-13
Identities = 32/105 (30%), Positives = 44/105 (41%)
Query: 176 LKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXX 235
L LD NQ VP LSN H +L + L+ N I T+ + SF +T L TL L
Sbjct: 759 LYLDGNQFTLVPKE-LSNYKHLTL--IDLSNNRISTLSNQSFS-NMTQLLTLILSYNRLR 814
Query: 236 XXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGN 280
L++L +P + LSAL +L + N
Sbjct: 815 CIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGAN 859
Score = 72 (30.4 bits), Expect = 8.6e-15, Sum P(3) = 8.6e-15
Identities = 25/86 (29%), Positives = 42/86 (48%)
Query: 367 LVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSL 425
+ +I L N + I AF +L + ++ N + +L FQG +L S+ L GN +
Sbjct: 302 ITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQ-ISELAPDAFQGLRSLNSLVLYGNKI 360
Query: 426 SHLEASHFP-LERISFLDLSDNPLHC 450
+ L S F L + L L+ N ++C
Sbjct: 361 TELPKSLFEGLFSLQLLLLNANKINC 386
Score = 59 (25.8 bits), Expect = 1.8e-13, Sum P(3) = 1.8e-13
Identities = 21/87 (24%), Positives = 40/87 (45%)
Query: 337 GTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFVDNIQLETVIIN 396
G + L L GN + + F+ LFSL+L+ +N ++ + AF D L + +
Sbjct: 346 GLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNA-NKINCLRVDAFQDLHNLNLLSLY 404
Query: 397 ENMNLKQLPSKLFQGNTNLKSVSLKGN 423
+N L+ + F ++++ L N
Sbjct: 405 DN-KLQTIAKGTFSPLRAIQTMHLAQN 430
Score = 58 (25.5 bits), Expect = 4.0e-23, Sum P(4) = 4.0e-23
Identities = 26/126 (20%), Positives = 51/126 (40%)
Query: 180 NNQILDVPNNVLSNLPH---QSLHYLYLNENLIETVLDNSF-PFTLTNLHTLALXXXXXX 235
+N I+D L+ +P +++ + L +N I+ + +F P+ L + L
Sbjct: 280 SNNIVDCRGKGLTEIPTNLPETITEIRLEQNTIKVIPPGAFSPYK--KLRRIDLSNNQIS 337
Query: 236 XXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFS 295
LR+L+ +P L +L L L+ N + + AF+ L +
Sbjct: 338 ELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHN 397
Query: 296 LKLVKI 301
L L+ +
Sbjct: 398 LNLLSL 403
Score = 57 (25.1 bits), Expect = 5.0e-23, Sum P(4) = 5.0e-23
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 269 LSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
L +L +L L GN + + F+ LFSL+L+ +N
Sbjct: 347 LRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLN 380
Score = 53 (23.7 bits), Expect = 1.5e-14, Sum P(4) = 1.5e-14
Identities = 17/57 (29%), Positives = 28/57 (49%)
Query: 390 LETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFPLERISFLDLSDN 446
L+TV+ N LK LP + + T L L GN + + + ++ +DLS+N
Sbjct: 734 LDTVVRCSNKGLKVLPKGIPRDVTELY---LDGNQFTLVPKELSNYKHLTLIDLSNN 787
Score = 53 (23.7 bits), Expect = 7.4e-13, Sum P(3) = 7.4e-13
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 261 IPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSL 296
+P K+LS L +DLS N S + + +F ++ L
Sbjct: 769 VP-KELSNYKHLTLIDLSNNRISTLSNQSFSNMTQL 803
Score = 53 (23.7 bits), Expect = 7.4e-13, Sum P(3) = 7.4e-13
Identities = 15/45 (33%), Positives = 21/45 (46%)
Query: 261 IPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIP 305
IP + L +L L L GN+ S + AF L +L + I P
Sbjct: 816 IPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANP 860
Score = 46 (21.3 bits), Expect = 4.0e-23, Sum P(4) = 4.0e-23
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 496 DRIIKNNHSLTIVLNNLKCSSPPDIKG 522
D +NN + +NN C PP+ G
Sbjct: 1004 DNDCENNSTCVDGINNYTCLCPPEYTG 1030
Score = 42 (19.8 bits), Expect = 1.7e-21, Sum P(4) = 1.7e-21
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 277 LSGNNFSNIDSVAFKSLFSLKLVKI 301
L+ N N+ FK L SLK + +
Sbjct: 589 LTSNRLENVQHKMFKGLESLKTLML 613
Score = 42 (19.8 bits), Expect = 4.9e-11, Sum P(3) = 4.9e-11
Identities = 20/96 (20%), Positives = 40/96 (41%)
Query: 420 LKGNSLSHLEASHFPLE-RISFLDLSDNPLHCD--C----NXXXXXXXXXXXXKSTMETT 472
L+G++++ ++ F SF+ S + LHC C N + + T
Sbjct: 242 LRGHNVAEVQKREFVCSGHQSFMAPSCSVLHCPAACTCSNNIVDCRGKGLTEIPTNLPET 301
Query: 473 TVAYEMTSNTS--ISPGTTTEAQRVDRIIKNNHSLT 506
+ NT I PG + +++ RI +N+ ++
Sbjct: 302 ITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQIS 337
Score = 39 (18.8 bits), Expect = 5.5e-19, Sum P(3) = 5.5e-19
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 505 LTIVL--NNLKCSSPPDIKGLE 524
LT++L N L+C P GL+
Sbjct: 804 LTLILSYNRLRCIPPRTFDGLK 825
Score = 38 (18.4 bits), Expect = 7.0e-19, Sum P(3) = 7.0e-19
Identities = 8/30 (26%), Positives = 14/30 (46%)
Query: 507 IVLNNLKCSSPPDIKGLEVKAVPENSVHCE 536
IV N +C P +K + ++ V C+
Sbjct: 684 IVTGNPRCQKPYFLKEIPIQDVAIQDFTCD 713
>UNIPROTKB|Q5T0V0 [details] [associations]
symbol:SLIT1 "Slit homolog 1 protein" species:9606 "Homo
sapiens" [GO:0005509 "calcium ion binding" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186
InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR025875 Pfam:PF12799 Pfam:PF02210
Pfam:PF12661 Pfam:PF01463 EMBL:AL442123 EMBL:AL512424
IPI:IPI00871419 UniGene:Hs.632082 HGNC:HGNC:11085
HOGENOM:HOG000116120 HOVERGEN:HBG057959 ChiTaRS:SLIT1 SMR:Q5T0V0
STRING:Q5T0V0 Ensembl:ENST00000371070 Uniprot:Q5T0V0
Length = 1461
Score = 212 (79.7 bits), Expect = 5.3e-23, Sum P(4) = 5.3e-23
Identities = 56/199 (28%), Positives = 96/199 (48%)
Query: 8 IFLILALTKLNKAICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVH 67
+ L A +L + CP+ C C ++ C GL+ +P + + + L N I+ +H
Sbjct: 20 LLLWAAAWRLGASACPALCTCTGTTVD--CHGTGLQAIPKNIPRNTERLELNGNNITRIH 77
Query: 68 YT-LSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKT 126
+ +LR L L N+I + F+ +L L ++ N++ L + F+ + L
Sbjct: 78 KNDFAGLKQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLHMLPELLFQNNQALSR 137
Query: 127 LDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDV 186
LDLS N I I + AFR L+ L L N I+ E+ F +L+ L +L L+NN I +
Sbjct: 138 LDLSENAIQAIPRKAFRGATDLKNLQLDKNQISCIEEGA-FRALRGLEVLTLNNNNITTI 196
Query: 187 PNNVLSNLPHQSLHYLYLN 205
P + +++P L+ N
Sbjct: 197 PVSSFNHMPKLRTFRLHSN 215
Score = 183 (69.5 bits), Expect = 9.1e-20, Sum P(4) = 9.1e-20
Identities = 57/170 (33%), Positives = 86/170 (50%)
Query: 17 LNKAICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRE-NRISNVHY-TLSFYI 74
L+ CP+ C C + ++ C GL +P L PE T I E N I ++ S Y
Sbjct: 277 LSSGSCPAMCTCSNGIVD--CRGKGLTAIPANL-PETMTEIRLELNGIKSIPPGAFSPYR 333
Query: 75 ELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKI 134
+LR +DLS N+I + F+ L +L + N+I+ L + F GL L+ L L+ NKI
Sbjct: 334 KLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLNANKI 393
Query: 135 SVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQIL 184
+ I AF+D +L LL L N I F+SL++++ L L N +
Sbjct: 394 NCIRPDAFQDLQNLSLLSLYDNKIQSLAKGT-FTSLRAIQTLHLAQNPFI 442
Score = 172 (65.6 bits), Expect = 2.8e-17, Sum P(3) = 2.8e-17
Identities = 47/160 (29%), Positives = 80/160 (50%)
Query: 21 ICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSF--YIELRS 78
+CP +C+C +E C+ L +P ++ + L N IS + T F L+
Sbjct: 512 VCPHKCRCEANVVE--CSSLKLTKIPERIPQSTAELRLNNNEISILEATGMFKKLTHLKK 569
Query: 79 LDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVIN 138
++LS NK++ + FE + L+++ N++ ++ F+GL L+TL L N+IS I+
Sbjct: 570 INLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIH 629
Query: 139 KTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKL 178
+F ++ LL L N IT F +L+SL L L
Sbjct: 630 NDSFTGLRNVRLLSLYDNQITTVSPGA-FDTLQSLSTLNL 668
Score = 169 (64.5 bits), Expect = 7.2e-08, Sum P(2) = 7.2e-08
Identities = 42/135 (31%), Positives = 67/135 (49%)
Query: 22 CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSFYIELRSLDL 81
CP C C D + C++ L +P + V + L N+ + V LS + L+ +DL
Sbjct: 734 CPQECACLDTVVR--CSNKHLRALPKGIPKNVTELYLDGNQFTLVPGQLSTFKYLQLVDL 791
Query: 82 SVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTA 141
S NKI+ L + +F ++L L +SYN + + F+GL+ L+ L L N IS + +
Sbjct: 792 SNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLHGNDISTLQEGI 851
Query: 142 FRDTLHLELLILSFN 156
F D L L + N
Sbjct: 852 FADVTSLSHLAIGAN 866
Score = 164 (62.8 bits), Expect = 1.1e-17, Sum P(4) = 1.1e-17
Identities = 45/133 (33%), Positives = 71/133 (53%)
Query: 52 EVQTIILRENRISNVHY-TLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEI 110
+++ + L EN+I V EL L L+ N++++L F+ L L++S N I
Sbjct: 86 QLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLHMLPELLFQNNQALSRLDLSENAI 145
Query: 111 SALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSL 170
A+ + F+G +LK L L N+IS I + AFR LE+L L+ NNIT S F+ +
Sbjct: 146 QAIPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNITTIPVSS-FNHM 204
Query: 171 KSLRILKLDNNQI 183
LR +L +N +
Sbjct: 205 PKLRTFRLHSNHL 217
Score = 144 (55.7 bits), Expect = 3.0e-14, Sum P(3) = 3.0e-14
Identities = 48/128 (37%), Positives = 66/128 (51%)
Query: 103 LNISYNEISAL-SKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYF 161
L ++ NEIS L + FK L LK ++LS NK+S I AF + L L+ N +
Sbjct: 545 LRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESI 604
Query: 162 EDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTL 221
S +F L LR L L NN+I + N+ + L + L LY +N I TV +F TL
Sbjct: 605 R-SGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLY--DNQITTVSPGAFD-TL 660
Query: 222 TNLHTLAL 229
+L TL L
Sbjct: 661 QSLSTLNL 668
Score = 136 (52.9 bits), Expect = 1.3e-14, Sum P(4) = 1.3e-14
Identities = 45/151 (29%), Positives = 73/151 (48%)
Query: 79 LDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVIN 138
L+L+ N I + ++F +L L + N+I A+ + F +KEL+ L L+ N++ ++
Sbjct: 66 LELNGNNITRIHKNDFAGLKQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLHMLP 125
Query: 139 KTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQS 198
+ F++ L L LS N I + F L+ L+LD NQI + L +
Sbjct: 126 ELLFQNNQALSRLDLSENAIQAIP-RKAFRGATDLKNLQLDKNQISCIEEGAFRAL--RG 182
Query: 199 LHYLYLNENLIETVLDNSFPFTLTNLHTLAL 229
L L LN N I T+ +SF + L T L
Sbjct: 183 LEVLTLNNNNITTIPVSSFNH-MPKLRTFRL 212
Score = 134 (52.2 bits), Expect = 5.3e-23, Sum P(4) = 5.3e-23
Identities = 41/122 (33%), Positives = 65/122 (53%)
Query: 335 PLGTLK-CDRLDLSGNNFSNIDSVAFKSLFS-LKLVKINLIPNLDSIDQRAFVDNIQLET 392
P G K L L GN F+ + S F L+LV ++ + S+ +F + QL T
Sbjct: 756 PKGIPKNVTELYLDGNQFTLVPGQL--STFKYLQLVDLSN-NKISSLSNSSFTNMSQLTT 812
Query: 393 VIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPLHCD 451
+I++ N L+ +P FQG +L+ +SL GN +S L+ F + +S L + NPL+CD
Sbjct: 813 LILSYNA-LQCIPPLAFQGLRSLRLLSLHGNDISTLQEGIFADVTSLSHLAIGANPLYCD 871
Query: 452 CN 453
C+
Sbjct: 872 CH 873
Score = 116 (45.9 bits), Expect = 7.7e-20, Sum P(3) = 7.7e-20
Identities = 37/116 (31%), Positives = 53/116 (45%)
Query: 340 KCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINEN 398
K R+DLS N + I AF+ L SL + L N + + + F L+ +++N N
Sbjct: 334 KLRRIDLSNNQIAEIAPDAFQGLRSLN--SLVLYGNKITDLPRGVFGGLYTLQLLLLNAN 391
Query: 399 MNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPLHCDCN 453
+ + FQ NL +SL N + L F L I L L+ NP CDCN
Sbjct: 392 -KINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQNPFICDCN 446
Score = 108 (43.1 bits), Expect = 7.4e-20, Sum P(4) = 7.4e-20
Identities = 32/112 (28%), Positives = 59/112 (52%)
Query: 343 RLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNL 401
+++LS N S I+ AF+ S+ +++L N L+SI F L T+++ N +
Sbjct: 569 KINLSNNKVSEIEDGAFEGAASVS--ELHLTANQLESIRSGMFRGLDGLRTLMLRNN-RI 625
Query: 402 KQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPLHCDC 452
+ + F G N++ +SL N ++ + F L+ +S L+L NP +C+C
Sbjct: 626 SCIHNDSFTGLRNVRLLSLYDNQITTVSPGAFDTLQSLSTLNLLANPFNCNC 677
Score = 102 (41.0 bits), Expect = 3.2e-11, Sum P(4) = 3.2e-11
Identities = 43/133 (32%), Positives = 55/133 (41%)
Query: 121 LKELKT-LDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLD 179
L E T + L N I I AF L + LS N I + F L+SL L L
Sbjct: 307 LPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAP-DAFQGLRSLNSLVLY 365
Query: 180 NNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXX 239
N+I D+P V L +L L LN N I + ++F L NL L+L
Sbjct: 366 GNKITDLPRGVFGGL--YTLQLLLLNANKINCIRPDAFQ-DLQNLSLLSLYDNKIQSLAK 422
Query: 240 XXXVTLR---TLH 249
+LR TLH
Sbjct: 423 GTFTSLRAIQTLH 435
Score = 102 (41.0 bits), Expect = 6.4e-10, Sum P(3) = 6.4e-10
Identities = 42/151 (27%), Positives = 69/151 (45%)
Query: 12 LALTKLNKAICPSRCQCFDQKLEASCTDA-GLEVVPIQLNPEVQTIILRENRISNVHY-T 69
L LTK+ + I S + E S +A G+ + ++ I L N++S +
Sbjct: 529 LKLTKIPERIPQSTAELRLNNNEISILEATGM----FKKLTHLKKINLSNNKVSEIEDGA 584
Query: 70 LSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDL 129
+ L L+ N++ + S F + L L + N IS + D+F GL+ ++ L L
Sbjct: 585 FEGAASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSL 644
Query: 130 SYNKISVINKTAFRDTLH----LELLILSFN 156
N+I+ ++ AF DTL L LL FN
Sbjct: 645 YDNQITTVSPGAF-DTLQSLSTLNLLANPFN 674
Score = 83 (34.3 bits), Expect = 5.2e-08, Sum P(3) = 5.2e-08
Identities = 34/127 (26%), Positives = 50/127 (39%)
Query: 176 LKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXX 235
L+L+ N I + N + L + L L L EN I V +F + L L L
Sbjct: 66 LELNGNNITRIHKNDFAGL--KQLRVLQLMENQIGAVERGAFD-DMKELERLRLNRNQLH 122
Query: 236 XXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFS 295
+ L AIP K + L NL L N S I+ AF++L
Sbjct: 123 MLPELLFQNNQALSRLDLSENAIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRG 182
Query: 296 LKLVKIN 302
L+++ +N
Sbjct: 183 LEVLTLN 189
Score = 58 (25.5 bits), Expect = 9.5e-11, Sum P(3) = 9.5e-11
Identities = 18/62 (29%), Positives = 34/62 (54%)
Query: 168 SSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTL 227
S+ K L+++ L NN+I + N+ +N+ L L L+ N ++ + +F L +L L
Sbjct: 781 STFKYLQLVDLSNNKISSLSNSSFTNM--SQLTTLILSYNALQCIPPLAFQ-GLRSLRLL 837
Query: 228 AL 229
+L
Sbjct: 838 SL 839
Score = 55 (24.4 bits), Expect = 5.3e-23, Sum P(4) = 5.3e-23
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 263 TKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSI 310
T KL+ L ++LS N S I+ AF+ S+ +++L N L+SI
Sbjct: 558 TGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVS--ELHLTANQLESI 604
Score = 55 (24.4 bits), Expect = 1.6e-14, Sum P(4) = 1.6e-14
Identities = 20/87 (22%), Positives = 40/87 (45%)
Query: 337 GTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFVDNIQLETVIIN 396
G + L L GN +++ F L++L+L+ +N ++ I AF D L + +
Sbjct: 355 GLRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLNA-NKINCIRPDAFQDLQNLSLLSLY 413
Query: 397 ENMNLKQLPSKLFQGNTNLKSVSLKGN 423
+N ++ L F ++++ L N
Sbjct: 414 DN-KIQSLAKGTFTSLRAIQTLHLAQN 439
Score = 54 (24.1 bits), Expect = 6.4e-15, Sum P(4) = 6.4e-15
Identities = 15/59 (25%), Positives = 30/59 (50%)
Query: 390 LETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFPLERISFLDLSDNPL 448
L+TV+ N +L+ LP + + N+ + L GN + + + + +DLS+N +
Sbjct: 741 LDTVVRCSNKHLRALPKGIPK---NVTELYLDGNQFTLVPGQLSTFKYLQLVDLSNNKI 796
Score = 53 (23.7 bits), Expect = 2.1e-13, Sum P(3) = 2.1e-13
Identities = 15/59 (25%), Positives = 26/59 (44%)
Query: 244 TLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
T + L ++ + +S L L LS N I +AF+ L SL+L+ ++
Sbjct: 782 TFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLH 840
Score = 50 (22.7 bits), Expect = 1.7e-22, Sum P(4) = 1.7e-22
Identities = 14/37 (37%), Positives = 18/37 (48%)
Query: 260 AIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSL 296
+IP S L +DLS N + I AF+ L SL
Sbjct: 323 SIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSL 359
Score = 48 (22.0 bits), Expect = 2.7e-22, Sum P(4) = 2.7e-22
Identities = 11/34 (32%), Positives = 21/34 (61%)
Query: 269 LSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
L +L +L L GN +++ F L++L+L+ +N
Sbjct: 356 LRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLN 389
Score = 48 (22.0 bits), Expect = 3.8e-13, Sum P(2) = 3.8e-13
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 513 KCSSPPDIKGLEVKAVPENSVHC 535
+CS P ++GL V V ++ C
Sbjct: 241 QCSGPASLRGLNVAEVQKSEFSC 263
Score = 47 (21.6 bits), Expect = 8.6e-13, Sum P(3) = 8.6e-13
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 265 QLSKLSALVNLDLSGNNFSNIDSVAFKSLFSL 296
QLS L +DLS N S++ + +F ++ L
Sbjct: 779 QLSTFKYLQLVDLSNNKISSLSNSSFTNMSQL 810
Score = 43 (20.2 bits), Expect = 2.2e-12, Sum P(3) = 2.2e-12
Identities = 23/97 (23%), Positives = 39/97 (40%)
Query: 419 SLKGNSLSHLEASHFPLE------RISFLDLSDN--PLHCDCNXXXXX---XXXXXXXKS 467
SL+G +++ ++ S F R+ LS P C C+ +
Sbjct: 247 SLRGLNVAEVQKSEFSCSGQGEAGRVPTCTLSSGSCPAMCTCSNGIVDCRGKGLTAIPAN 306
Query: 468 TMETTT-VAYEMTSNTSISPGTTTEAQRVDRI-IKNN 502
ET T + E+ SI PG + +++ RI + NN
Sbjct: 307 LPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNN 343
Score = 42 (19.8 bits), Expect = 5.3e-23, Sum P(4) = 5.3e-23
Identities = 6/24 (25%), Positives = 12/24 (50%)
Query: 513 KCSSPPDIKGLEVKAVPENSVHCE 536
+C+ P D++G + P C+
Sbjct: 892 RCAGPQDMEGKLLLTTPAKKFECQ 915
Score = 39 (18.8 bits), Expect = 1.5e-19, Sum P(4) = 1.5e-19
Identities = 8/30 (26%), Positives = 15/30 (50%)
Query: 507 IVLNNLKCSSPPDIKGLEVKAVPENSVHCE 536
IV N +C +P ++ + ++ V CE
Sbjct: 691 IVTGNPRCQNPDFLRQIPLQDVAFPDFRCE 720
>UNIPROTKB|F1P8A1 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005576 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 Pfam:PF00054 SMART:SM00274 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF12661 Pfam:PF01463
GeneTree:ENSGT00700000104083 CTD:9353 KO:K06839 OMA:RHKMFKG
EMBL:AAEX03002614 EMBL:AAEX03002615 EMBL:AAEX03002616
RefSeq:XP_854843.1 ProteinModelPortal:F1P8A1
Ensembl:ENSCAFT00000026343 GeneID:595148 KEGG:cfa:595148
Uniprot:F1P8A1
Length = 1530
Score = 200 (75.5 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 48/135 (35%), Positives = 71/135 (52%)
Query: 22 CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSFYIELRSLDL 81
CP+ C C D + C++ GL+V+P + +V + L N + V L Y L +DL
Sbjct: 727 CPTECTCLDTVVR--CSNKGLKVLPKGIPRDVTELYLDGNHFTLVPKELYNYKHLTLIDL 784
Query: 82 SVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTA 141
S N+I+ L + +F +LL L +SYN + + TF GLK L+ L L N ISV+ + A
Sbjct: 785 SNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGA 844
Query: 142 FRDTLHLELLILSFN 156
F D L L + N
Sbjct: 845 FSDLSALSHLAIGAN 859
Score = 197 (74.4 bits), Expect = 5.9e-23, Sum P(4) = 5.9e-23
Identities = 57/200 (28%), Positives = 95/200 (47%)
Query: 10 LILALTKLNKAICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYT 69
++L L + CP++C C ++ C L VP + + + L N I+ + T
Sbjct: 16 VLLILGEAAPQACPAQCSCSGSTVD--CHGLALRSVPRSIPRNTERLDLNGNNITRITKT 73
Query: 70 -LSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLD 128
+ LR L L NKI+ + F+ +L L ++ N + + F G +L LD
Sbjct: 74 DFAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTSKLYRLD 133
Query: 129 LSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPN 188
LS N+I I + AFR + ++ L L +N I+ ED F +L+ L +L L+NN I +
Sbjct: 134 LSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGA-FRALRDLEVLTLNNNNITRLSV 192
Query: 189 NVLSNLPHQSLHYLYLNENL 208
+++P L+ N NL
Sbjct: 193 ASFNHMPKLRTFRLHSN-NL 211
Score = 182 (69.1 bits), Expect = 7.6e-20, Sum P(3) = 7.6e-20
Identities = 52/164 (31%), Positives = 83/164 (50%)
Query: 22 CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHY-TLSFYIELRSLD 80
CP+ C C + ++ C GL +P L + I L +N I + S Y +LR +D
Sbjct: 273 CPAACTCSNNIVD--CRGKGLTEIPTNLPETITEIRLEQNSIKVIPPGAFSPYKKLRRID 330
Query: 81 LSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKT 140
LS N+I+ L F+ L +L + N+I+ L K F+GL L+ L L+ NKI+ +
Sbjct: 331 LSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVD 390
Query: 141 AFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQIL 184
AF+D +L LL L N + FS L++++ + L N +
Sbjct: 391 AFQDLHNLNLLSLYDNKLQTIAKGT-FSPLRAIQTMHLAQNPFI 433
Score = 161 (61.7 bits), Expect = 1.5e-17, Sum P(3) = 1.5e-17
Identities = 44/151 (29%), Positives = 76/151 (50%)
Query: 76 LRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKIS 135
+ + L N I V+ F KL +++S N+IS L+ D F+GL+ L +L L NKI+
Sbjct: 302 ITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKIT 361
Query: 136 VINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLP 195
+ K+ F L+LL+L+ N I + F L +L +L L +N++ + S P
Sbjct: 362 ELPKSLFEGLFSLQLLLLNANKINCLR-VDAFQDLHNLNLLSLYDNKLQTIAKGTFS--P 418
Query: 196 HQSLHYLYLNENLIETVLDNSFPFTLTNLHT 226
+++ ++L +N + D + LHT
Sbjct: 419 LRAIQTMHLAQNPF--ICDCHLKWLADYLHT 447
Score = 146 (56.5 bits), Expect = 2.5e-17, Sum P(4) = 2.5e-17
Identities = 42/127 (33%), Positives = 63/127 (49%)
Query: 103 LNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFE 162
L+++ N I+ ++K F GL+ L+ L L NKIS I + AF+D LE L L+ N++ F
Sbjct: 60 LDLNGNNITRITKTDFAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNHLQLFP 119
Query: 163 DSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLT 222
+ +F L L L NQI +P + L L+ N I + D +F L
Sbjct: 120 EL-LFLGTSKLYRLDLSENQIQAIPRKAFRGAV--DIKNLQLDYNQISCIEDGAFR-ALR 175
Query: 223 NLHTLAL 229
+L L L
Sbjct: 176 DLEVLTL 182
Score = 145 (56.1 bits), Expect = 5.9e-23, Sum P(4) = 5.9e-23
Identities = 39/113 (34%), Positives = 66/113 (58%)
Query: 344 LDLSGNNFSNIDSVAFKSLFSLK-LVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNL 401
L L GN+F+ + K L++ K L I+L N + ++ ++F + QL T+I++ N L
Sbjct: 759 LYLDGNHFTLVP----KELYNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN-RL 813
Query: 402 KQLPSKLFQGNTNLKSVSLKGNSLSHL-EASHFPLERISFLDLSDNPLHCDCN 453
+ +P + F G +L+ +SL GN +S + E + L +S L + NPL+CDCN
Sbjct: 814 RCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFSDLSALSHLAIGANPLYCDCN 866
Score = 139 (54.0 bits), Expect = 3.4e-15, Sum P(3) = 3.4e-15
Identities = 44/159 (27%), Positives = 70/159 (44%)
Query: 22 CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSF--YIELRSL 79
CP +C+C + C++ L +P + + L N + + T F +LR +
Sbjct: 506 CPEKCRC--EGTTVDCSNQKLTKIPDHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKI 563
Query: 80 DLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINK 139
+ S NKI + FE + + ++ N + + FKGL+ LKTL L N+IS +
Sbjct: 564 NFSNNKITDIEEGAFEGAAGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRISCVGN 623
Query: 140 TAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKL 178
+F + LL L N I F +L SL L L
Sbjct: 624 DSFIGLSSVRLLSLYDNQIATIAPGA-FDTLHSLSTLNL 661
Score = 128 (50.1 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 35/105 (33%), Positives = 53/105 (50%)
Query: 103 LNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFE 162
L + N + + K+ + K L +DLS N+IS ++ +F + L LILS+N +
Sbjct: 759 LYLDGNHFTLVPKELYN-YKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIP 817
Query: 163 DSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNEN 207
F LKSLR+L L N I VP S+L +L +L + N
Sbjct: 818 P-RTFDGLKSLRLLSLHGNDISVVPEGAFSDL--SALSHLAIGAN 859
Score = 120 (47.3 bits), Expect = 6.2e-19, Sum P(3) = 6.2e-19
Identities = 37/116 (31%), Positives = 54/116 (46%)
Query: 340 KCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINEN 398
K R+DLS N S + AF+ L SL + L N + + + F L+ +++N N
Sbjct: 325 KLRRIDLSNNQISELAPDAFQGLRSLN--SLVLYGNKITELPKSLFEGLFSLQLLLLNAN 382
Query: 399 MNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHF-PLERISFLDLSDNPLHCDCN 453
+ L FQ NL +SL N L + F PL I + L+ NP CDC+
Sbjct: 383 -KINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCH 437
Score = 103 (41.3 bits), Expect = 5.2e-13, Sum P(4) = 5.2e-13
Identities = 33/96 (34%), Positives = 47/96 (48%)
Query: 122 KELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNN 181
+ + LDL+ N I+ I KT F HL +L L N I+ E F LK L L+L+ N
Sbjct: 55 RNTERLDLNGNNITRITKTDFAGLRHLRVLQLMENKISTIERGA-FQDLKELERLRLNRN 113
Query: 182 QILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSF 217
+ P L L L+ L L+EN I+ + +F
Sbjct: 114 HLQLFPE--LLFLGTSKLYRLDLSENQIQAIPRKAF 147
Score = 100 (40.3 bits), Expect = 2.1e-18, Sum P(4) = 2.1e-18
Identities = 31/108 (28%), Positives = 56/108 (51%)
Query: 344 LDLSGNNFSNIDSVA-FKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNL 401
L L+ N F+ +++ FK L L+ KIN N + I++ AF + +++ N L
Sbjct: 538 LRLNNNEFTVLEATGIFKKLPQLR--KINFSNNKITDIEEGAFEGAAGVNEILLTSN-RL 594
Query: 402 KQLPSKLFQGNTNLKSVSLKGNSLSHLEASHF-PLERISFLDLSDNPL 448
+ + K+F+G +LK++ L+ N +S + F L + L L DN +
Sbjct: 595 ENVQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLSSVRLLSLYDNQI 642
Score = 96 (38.9 bits), Expect = 7.8e-11, Sum P(3) = 7.8e-11
Identities = 32/111 (28%), Positives = 53/111 (47%)
Query: 51 PEVQTIILRENRISNVHY-TLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNE 109
P+++ I N+I+++ + + L+ N++ + F+ L L + N
Sbjct: 558 PQLRKINFSNNKITDIEEGAFEGAAGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNR 617
Query: 110 ISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLH----LELLILSFN 156
IS + D+F GL ++ L L N+I+ I AF DTLH L LL FN
Sbjct: 618 ISCVGNDSFIGLSSVRLLSLYDNQIATIAPGAF-DTLHSLSTLNLLANPFN 667
Score = 95 (38.5 bits), Expect = 6.8e-18, Sum P(4) = 6.8e-18
Identities = 27/112 (24%), Positives = 59/112 (52%)
Query: 343 RLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNL 401
+++ S N ++I+ AF+ + +I L N L+++ + F L+T+++ N +
Sbjct: 562 KINFSNNKITDIEEGAFEGAAGVN--EILLTSNRLENVQHKMFKGLESLKTLMLRSN-RI 618
Query: 402 KQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPLHCDC 452
+ + F G ++++ +SL N ++ + F L +S L+L NP +C+C
Sbjct: 619 SCVGNDSFIGLSSVRLLSLYDNQIATIAPGAFDTLHSLSTLNLLANPFNCNC 670
Score = 90 (36.7 bits), Expect = 3.2e-10, Sum P(3) = 3.2e-10
Identities = 38/158 (24%), Positives = 58/158 (36%)
Query: 126 TLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILD 185
T+D S K++ I + T L L + N T E + IF L LR + NN+I D
Sbjct: 516 TVDCSNQKLTKIPDHIPQYTAELRL---NNNEFTVLEATGIFKKLPQLRKINFSNNKITD 572
Query: 186 VPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTL 245
+ ++ + L N +E V F L +L TL L + L
Sbjct: 573 IEEGAFEGAA--GVNEILLTSNRLENVQHKMFK-GLESLKTLMLRSNRISCVGNDSFIGL 629
Query: 246 RTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFS 283
++ I L +L L+L N F+
Sbjct: 630 SSVRLLSLYDNQIATIAPGAFDTLHSLSTLNLLANPFN 667
Score = 85 (35.0 bits), Expect = 1.0e-09, Sum P(3) = 1.0e-09
Identities = 34/127 (26%), Positives = 49/127 (38%)
Query: 176 LKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXX 235
L L+ N I + + L H L L L EN I T+ +F L L L L
Sbjct: 60 LDLNGNNITRITKTDFAGLRH--LRVLQLMENKISTIERGAFQ-DLKELERLRLNRNHLQ 116
Query: 236 XXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFS 295
+ L+ AIP K + NL L N S I+ AF++L
Sbjct: 117 LFPELLFLGTSKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRD 176
Query: 296 LKLVKIN 302
L+++ +N
Sbjct: 177 LEVLTLN 183
Score = 76 (31.8 bits), Expect = 8.5e-13, Sum P(3) = 8.5e-13
Identities = 31/105 (29%), Positives = 42/105 (40%)
Query: 176 LKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXX 235
L LD N VP L N H +L + L+ N I T+ + SF +T L TL L
Sbjct: 759 LYLDGNHFTLVPKE-LYNYKHLTL--IDLSNNRISTLSNQSFS-NMTQLLTLILSYNRLR 814
Query: 236 XXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGN 280
L++L +P S LSAL +L + N
Sbjct: 815 CIPPRTFDGLKSLRLLSLHGNDISVVPEGAFSDLSALSHLAIGAN 859
Score = 72 (30.4 bits), Expect = 5.0e-14, Sum P(3) = 5.0e-14
Identities = 25/86 (29%), Positives = 42/86 (48%)
Query: 367 LVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSL 425
+ +I L N + I AF +L + ++ N + +L FQG +L S+ L GN +
Sbjct: 302 ITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQ-ISELAPDAFQGLRSLNSLVLYGNKI 360
Query: 426 SHLEASHFP-LERISFLDLSDNPLHC 450
+ L S F L + L L+ N ++C
Sbjct: 361 TELPKSLFEGLFSLQLLLLNANKINC 386
Score = 59 (25.8 bits), Expect = 1.0e-12, Sum P(3) = 1.0e-12
Identities = 21/87 (24%), Positives = 40/87 (45%)
Query: 337 GTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFVDNIQLETVIIN 396
G + L L GN + + F+ LFSL+L+ +N ++ + AF D L + +
Sbjct: 346 GLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNA-NKINCLRVDAFQDLHNLNLLSLY 404
Query: 397 ENMNLKQLPSKLFQGNTNLKSVSLKGN 423
+N L+ + F ++++ L N
Sbjct: 405 DN-KLQTIAKGTFSPLRAIQTMHLAQN 430
Score = 57 (25.1 bits), Expect = 5.9e-23, Sum P(4) = 5.9e-23
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 269 LSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
L +L +L L GN + + F+ LFSL+L+ +N
Sbjct: 347 LRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLN 380
Score = 57 (25.1 bits), Expect = 5.9e-23, Sum P(4) = 5.9e-23
Identities = 26/126 (20%), Positives = 51/126 (40%)
Query: 180 NNQILDVPNNVLSNLPH---QSLHYLYLNENLIETVLDNSF-PFTLTNLHTLALXXXXXX 235
+N I+D L+ +P +++ + L +N I+ + +F P+ L + L
Sbjct: 280 SNNIVDCRGKGLTEIPTNLPETITEIRLEQNSIKVIPPGAFSPYK--KLRRIDLSNNQIS 337
Query: 236 XXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFS 295
LR+L+ +P L +L L L+ N + + AF+ L +
Sbjct: 338 ELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHN 397
Query: 296 LKLVKI 301
L L+ +
Sbjct: 398 LNLLSL 403
Score = 57 (25.1 bits), Expect = 4.5e-14, Sum P(4) = 4.5e-14
Identities = 17/57 (29%), Positives = 29/57 (50%)
Query: 390 LETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFPLERISFLDLSDN 446
L+TV+ N LK LP + + T L L GN + + + + ++ +DLS+N
Sbjct: 734 LDTVVRCSNKGLKVLPKGIPRDVTELY---LDGNHFTLVPKELYNYKHLTLIDLSNN 787
Score = 53 (23.7 bits), Expect = 4.3e-12, Sum P(3) = 4.3e-12
Identities = 15/45 (33%), Positives = 21/45 (46%)
Query: 261 IPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIP 305
IP + L +L L L GN+ S + AF L +L + I P
Sbjct: 816 IPPRTFDGLKSLRLLSLHGNDISVVPEGAFSDLSALSHLAIGANP 860
Score = 47 (21.6 bits), Expect = 1.7e-11, Sum P(3) = 1.7e-11
Identities = 11/36 (30%), Positives = 19/36 (52%)
Query: 261 IPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSL 296
+P K+L L +DLS N S + + +F ++ L
Sbjct: 769 VP-KELYNYKHLTLIDLSNNRISTLSNQSFSNMTQL 803
Score = 46 (21.3 bits), Expect = 5.9e-23, Sum P(4) = 5.9e-23
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 496 DRIIKNNHSLTIVLNNLKCSSPPDIKG 522
D +NN + +NN C PP+ G
Sbjct: 1004 DNDCENNSTCVDGINNYTCLCPPEYTG 1030
Score = 45 (20.9 bits), Expect = 7.1e-13, Sum P(4) = 7.1e-13
Identities = 17/87 (19%), Positives = 35/87 (40%)
Query: 337 GTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFVDNIQLETVIIN 396
G + + L+ N N+ FK L SLK + + + + +F+ + + +
Sbjct: 580 GAAGVNEILLTSNRLENVQHKMFKGLESLKTLMLRS-NRISCVGNDSFIGLSSVRLLSLY 638
Query: 397 ENMNLKQLPSKLFQGNTNLKSVSLKGN 423
+N P F +L +++L N
Sbjct: 639 DNQIATIAPGA-FDTLHSLSTLNLLAN 664
Score = 44 (20.5 bits), Expect = 8.9e-13, Sum P(4) = 8.9e-13
Identities = 26/113 (23%), Positives = 42/113 (37%)
Query: 268 KLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQXXXXXXXXXXXXXX 326
KL L ++ S N ++I+ AF+ + +I L N L+++
Sbjct: 556 KLPQLRKINFSNNKITDIEEGAFEGAAGVN--EILLTSNRLENVQHKMFKGLESLKTLML 613
Query: 327 XXXAFSLTP----LGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN 375
S +G L L N + I AF +L SL +NL+ N
Sbjct: 614 RSNRISCVGNDSFIGLSSVRLLSLYDNQIATIAPGAFDTLHSLST--LNLLAN 664
Score = 43 (20.2 bits), Expect = 2.2e-10, Sum P(3) = 2.2e-10
Identities = 22/96 (22%), Positives = 42/96 (43%)
Query: 420 LKGNSLSHLEASHFPLE-RISFLDLSDNPLHCD--C----NXXXXXXXXXXXXKSTM-ET 471
L+G++++ ++ F SF+ S + LHC C N + + ET
Sbjct: 242 LRGHNVAEVQKREFVCSGHQSFMAPSCSVLHCPAACTCSNNIVDCRGKGLTEIPTNLPET 301
Query: 472 TT-VAYEMTSNTSISPGTTTEAQRVDRIIKNNHSLT 506
T + E S I PG + +++ RI +N+ ++
Sbjct: 302 ITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQIS 337
Score = 39 (18.8 bits), Expect = 3.0e-22, Sum P(4) = 3.0e-22
Identities = 9/28 (32%), Positives = 11/28 (39%)
Query: 496 DRIIKNNHSLTIVLNNLKCSSPPDIKGL 523
D KN T +N C+ P GL
Sbjct: 1082 DHKCKNGAHCTDAVNGYTCTCPEGYSGL 1109
Score = 39 (18.8 bits), Expect = 1.1e-17, Sum P(4) = 1.1e-17
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 505 LTIVL--NNLKCSSPPDIKGLE 524
LT++L N L+C P GL+
Sbjct: 804 LTLILSYNRLRCIPPRTFDGLK 825
Score = 38 (18.4 bits), Expect = 1.4e-17, Sum P(4) = 1.4e-17
Identities = 8/30 (26%), Positives = 14/30 (46%)
Query: 507 IVLNNLKCSSPPDIKGLEVKAVPENSVHCE 536
IV N +C P +K + ++ V C+
Sbjct: 684 IVTGNPRCQKPYFLKEIPIQDVAIQDFTCD 713
>UNIPROTKB|O75093 [details] [associations]
symbol:SLIT1 "Slit homolog 1 protein" species:9606 "Homo
sapiens" [GO:0021510 "spinal cord development" evidence=IEA]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IEA]
[GO:0033563 "dorsal/ventral axon guidance" evidence=IEA]
[GO:0040023 "establishment of nucleus localization" evidence=IEA]
[GO:0043395 "heparan sulfate proteoglycan binding" evidence=IEA]
[GO:0048843 "negative regulation of axon extension involved in axon
guidance" evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IMP] [GO:0005509 "calcium ion binding" evidence=NAS]
[GO:0005615 "extracellular space" evidence=NAS] [GO:0048853
"forebrain morphogenesis" evidence=NAS] [GO:0048846 "axon extension
involved in axon guidance" evidence=IDA] [GO:0050919 "negative
chemotaxis" evidence=IDA] [GO:0051964 "negative regulation of
synapse assembly" evidence=ISS] [GO:0048495 "Roundabout binding"
evidence=IPI] [GO:0021834 "chemorepulsion involved in embryonic
olfactory bulb interneuron precursor migration" evidence=IDA]
[GO:0007411 "axon guidance" evidence=IDA;TAS] [GO:0005737
"cytoplasm" evidence=IDA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005737
Reactome:REACT_111045 GO:GO:0005615 EMBL:CH471066 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0008045 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS50025
GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0040023 InterPro:IPR025875 Pfam:PF12799 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 GO:GO:0048846 Pfam:PF12661 GO:GO:0033563 GO:GO:0051964
GO:GO:0048853 Pfam:PF01463 EMBL:AL442123 GO:GO:0022028
GO:GO:0050919 GO:GO:0048843 EMBL:AB017167 EMBL:AB011537
EMBL:AL512424 EMBL:BC146851 EMBL:AY029183 IPI:IPI00296434
IPI:IPI00871419 RefSeq:NP_003052.2 UniGene:Hs.632082
ProteinModelPortal:O75093 SMR:O75093 IntAct:O75093
MINT:MINT-2797238 STRING:O75093 PhosphoSite:O75093 PaxDb:O75093
PRIDE:O75093 Ensembl:ENST00000266058 GeneID:6585 KEGG:hsa:6585
UCSC:uc001kmw.2 CTD:6585 GeneCards:GC10M098747 H-InvDB:HIX0079168
H-InvDB:HIX0170440 HGNC:HGNC:11085 HPA:HPA006879 MIM:603742
neXtProt:NX_O75093 PharmGKB:PA35938 HOGENOM:HOG000116120
HOVERGEN:HBG057959 InParanoid:O75093 KO:K06838 OrthoDB:EOG4VDPXM
PhylomeDB:O75093 ChiTaRS:SLIT1 GenomeRNAi:6585 NextBio:25625
ArrayExpress:O75093 Bgee:O75093 CleanEx:HS_SLIT1
Genevestigator:O75093 GermOnline:ENSG00000187122 Uniprot:O75093
Length = 1534
Score = 212 (79.7 bits), Expect = 6.7e-23, Sum P(4) = 6.7e-23
Identities = 56/199 (28%), Positives = 96/199 (48%)
Query: 8 IFLILALTKLNKAICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVH 67
+ L A +L + CP+ C C ++ C GL+ +P + + + L N I+ +H
Sbjct: 20 LLLWAAAWRLGASACPALCTCTGTTVD--CHGTGLQAIPKNIPRNTERLELNGNNITRIH 77
Query: 68 YT-LSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKT 126
+ +LR L L N+I + F+ +L L ++ N++ L + F+ + L
Sbjct: 78 KNDFAGLKQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLHMLPELLFQNNQALSR 137
Query: 127 LDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDV 186
LDLS N I I + AFR L+ L L N I+ E+ F +L+ L +L L+NN I +
Sbjct: 138 LDLSENAIQAIPRKAFRGATDLKNLQLDKNQISCIEEGA-FRALRGLEVLTLNNNNITTI 196
Query: 187 PNNVLSNLPHQSLHYLYLN 205
P + +++P L+ N
Sbjct: 197 PVSSFNHMPKLRTFRLHSN 215
Score = 183 (69.5 bits), Expect = 1.1e-19, Sum P(4) = 1.1e-19
Identities = 57/170 (33%), Positives = 86/170 (50%)
Query: 17 LNKAICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRE-NRISNVHY-TLSFYI 74
L+ CP+ C C + ++ C GL +P L PE T I E N I ++ S Y
Sbjct: 277 LSSGSCPAMCTCSNGIVD--CRGKGLTAIPANL-PETMTEIRLELNGIKSIPPGAFSPYR 333
Query: 75 ELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKI 134
+LR +DLS N+I + F+ L +L + N+I+ L + F GL L+ L L+ NKI
Sbjct: 334 KLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLNANKI 393
Query: 135 SVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQIL 184
+ I AF+D +L LL L N I F+SL++++ L L N +
Sbjct: 394 NCIRPDAFQDLQNLSLLSLYDNKIQSLAKGT-FTSLRAIQTLHLAQNPFI 442
Score = 172 (65.6 bits), Expect = 3.3e-17, Sum P(3) = 3.3e-17
Identities = 47/160 (29%), Positives = 80/160 (50%)
Query: 21 ICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSF--YIELRS 78
+CP +C+C +E C+ L +P ++ + L N IS + T F L+
Sbjct: 512 VCPHKCRCEANVVE--CSSLKLTKIPERIPQSTAELRLNNNEISILEATGMFKKLTHLKK 569
Query: 79 LDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVIN 138
++LS NK++ + FE + L+++ N++ ++ F+GL L+TL L N+IS I+
Sbjct: 570 INLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIH 629
Query: 139 KTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKL 178
+F ++ LL L N IT F +L+SL L L
Sbjct: 630 NDSFTGLRNVRLLSLYDNQITTVSPGA-FDTLQSLSTLNL 668
Score = 169 (64.5 bits), Expect = 8.1e-08, Sum P(2) = 8.1e-08
Identities = 42/135 (31%), Positives = 67/135 (49%)
Query: 22 CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSFYIELRSLDL 81
CP C C D + C++ L +P + V + L N+ + V LS + L+ +DL
Sbjct: 734 CPQECACLDTVVR--CSNKHLRALPKGIPKNVTELYLDGNQFTLVPGQLSTFKYLQLVDL 791
Query: 82 SVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTA 141
S NKI+ L + +F ++L L +SYN + + F+GL+ L+ L L N IS + +
Sbjct: 792 SNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLHGNDISTLQEGI 851
Query: 142 FRDTLHLELLILSFN 156
F D L L + N
Sbjct: 852 FADVTSLSHLAIGAN 866
Score = 164 (62.8 bits), Expect = 1.4e-17, Sum P(4) = 1.4e-17
Identities = 45/133 (33%), Positives = 71/133 (53%)
Query: 52 EVQTIILRENRISNVHY-TLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEI 110
+++ + L EN+I V EL L L+ N++++L F+ L L++S N I
Sbjct: 86 QLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLHMLPELLFQNNQALSRLDLSENAI 145
Query: 111 SALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSL 170
A+ + F+G +LK L L N+IS I + AFR LE+L L+ NNIT S F+ +
Sbjct: 146 QAIPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNITTIPVSS-FNHM 204
Query: 171 KSLRILKLDNNQI 183
LR +L +N +
Sbjct: 205 PKLRTFRLHSNHL 217
Score = 144 (55.7 bits), Expect = 3.6e-14, Sum P(3) = 3.6e-14
Identities = 48/128 (37%), Positives = 66/128 (51%)
Query: 103 LNISYNEISAL-SKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYF 161
L ++ NEIS L + FK L LK ++LS NK+S I AF + L L+ N +
Sbjct: 545 LRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESI 604
Query: 162 EDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTL 221
S +F L LR L L NN+I + N+ + L + L LY +N I TV +F TL
Sbjct: 605 R-SGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLY--DNQITTVSPGAFD-TL 660
Query: 222 TNLHTLAL 229
+L TL L
Sbjct: 661 QSLSTLNL 668
Score = 136 (52.9 bits), Expect = 1.6e-14, Sum P(4) = 1.6e-14
Identities = 45/151 (29%), Positives = 73/151 (48%)
Query: 79 LDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVIN 138
L+L+ N I + ++F +L L + N+I A+ + F +KEL+ L L+ N++ ++
Sbjct: 66 LELNGNNITRIHKNDFAGLKQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLHMLP 125
Query: 139 KTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQS 198
+ F++ L L LS N I + F L+ L+LD NQI + L +
Sbjct: 126 ELLFQNNQALSRLDLSENAIQAIP-RKAFRGATDLKNLQLDKNQISCIEEGAFRAL--RG 182
Query: 199 LHYLYLNENLIETVLDNSFPFTLTNLHTLAL 229
L L LN N I T+ +SF + L T L
Sbjct: 183 LEVLTLNNNNITTIPVSSFNH-MPKLRTFRL 212
Score = 134 (52.2 bits), Expect = 6.7e-23, Sum P(4) = 6.7e-23
Identities = 41/122 (33%), Positives = 65/122 (53%)
Query: 335 PLGTLK-CDRLDLSGNNFSNIDSVAFKSLFS-LKLVKINLIPNLDSIDQRAFVDNIQLET 392
P G K L L GN F+ + S F L+LV ++ + S+ +F + QL T
Sbjct: 756 PKGIPKNVTELYLDGNQFTLVPGQL--STFKYLQLVDLSN-NKISSLSNSSFTNMSQLTT 812
Query: 393 VIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPLHCD 451
+I++ N L+ +P FQG +L+ +SL GN +S L+ F + +S L + NPL+CD
Sbjct: 813 LILSYNA-LQCIPPLAFQGLRSLRLLSLHGNDISTLQEGIFADVTSLSHLAIGANPLYCD 871
Query: 452 CN 453
C+
Sbjct: 872 CH 873
Score = 116 (45.9 bits), Expect = 9.2e-20, Sum P(3) = 9.2e-20
Identities = 37/116 (31%), Positives = 53/116 (45%)
Query: 340 KCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINEN 398
K R+DLS N + I AF+ L SL + L N + + + F L+ +++N N
Sbjct: 334 KLRRIDLSNNQIAEIAPDAFQGLRSLN--SLVLYGNKITDLPRGVFGGLYTLQLLLLNAN 391
Query: 399 MNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPLHCDCN 453
+ + FQ NL +SL N + L F L I L L+ NP CDCN
Sbjct: 392 -KINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQNPFICDCN 446
Score = 108 (43.1 bits), Expect = 9.3e-20, Sum P(4) = 9.3e-20
Identities = 32/112 (28%), Positives = 59/112 (52%)
Query: 343 RLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNL 401
+++LS N S I+ AF+ S+ +++L N L+SI F L T+++ N +
Sbjct: 569 KINLSNNKVSEIEDGAFEGAASVS--ELHLTANQLESIRSGMFRGLDGLRTLMLRNN-RI 625
Query: 402 KQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPLHCDC 452
+ + F G N++ +SL N ++ + F L+ +S L+L NP +C+C
Sbjct: 626 SCIHNDSFTGLRNVRLLSLYDNQITTVSPGAFDTLQSLSTLNLLANPFNCNC 677
Score = 102 (41.0 bits), Expect = 4.0e-11, Sum P(4) = 4.0e-11
Identities = 43/133 (32%), Positives = 55/133 (41%)
Query: 121 LKELKT-LDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLD 179
L E T + L N I I AF L + LS N I + F L+SL L L
Sbjct: 307 LPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAP-DAFQGLRSLNSLVLY 365
Query: 180 NNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXX 239
N+I D+P V L +L L LN N I + ++F L NL L+L
Sbjct: 366 GNKITDLPRGVFGGL--YTLQLLLLNANKINCIRPDAFQ-DLQNLSLLSLYDNKIQSLAK 422
Query: 240 XXXVTLR---TLH 249
+LR TLH
Sbjct: 423 GTFTSLRAIQTLH 435
Score = 102 (41.0 bits), Expect = 7.5e-10, Sum P(3) = 7.5e-10
Identities = 42/151 (27%), Positives = 69/151 (45%)
Query: 12 LALTKLNKAICPSRCQCFDQKLEASCTDA-GLEVVPIQLNPEVQTIILRENRISNVHY-T 69
L LTK+ + I S + E S +A G+ + ++ I L N++S +
Sbjct: 529 LKLTKIPERIPQSTAELRLNNNEISILEATGM----FKKLTHLKKINLSNNKVSEIEDGA 584
Query: 70 LSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDL 129
+ L L+ N++ + S F + L L + N IS + D+F GL+ ++ L L
Sbjct: 585 FEGAASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSL 644
Query: 130 SYNKISVINKTAFRDTLH----LELLILSFN 156
N+I+ ++ AF DTL L LL FN
Sbjct: 645 YDNQITTVSPGAF-DTLQSLSTLNLLANPFN 674
Score = 83 (34.3 bits), Expect = 6.0e-08, Sum P(3) = 6.0e-08
Identities = 34/127 (26%), Positives = 50/127 (39%)
Query: 176 LKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXX 235
L+L+ N I + N + L + L L L EN I V +F + L L L
Sbjct: 66 LELNGNNITRIHKNDFAGL--KQLRVLQLMENQIGAVERGAFD-DMKELERLRLNRNQLH 122
Query: 236 XXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFS 295
+ L AIP K + L NL L N S I+ AF++L
Sbjct: 123 MLPELLFQNNQALSRLDLSENAIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRG 182
Query: 296 LKLVKIN 302
L+++ +N
Sbjct: 183 LEVLTLN 189
Score = 58 (25.5 bits), Expect = 1.1e-10, Sum P(3) = 1.1e-10
Identities = 18/62 (29%), Positives = 34/62 (54%)
Query: 168 SSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTL 227
S+ K L+++ L NN+I + N+ +N+ L L L+ N ++ + +F L +L L
Sbjct: 781 STFKYLQLVDLSNNKISSLSNSSFTNM--SQLTTLILSYNALQCIPPLAFQ-GLRSLRLL 837
Query: 228 AL 229
+L
Sbjct: 838 SL 839
Score = 55 (24.4 bits), Expect = 6.7e-23, Sum P(4) = 6.7e-23
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 263 TKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSI 310
T KL+ L ++LS N S I+ AF+ S+ +++L N L+SI
Sbjct: 558 TGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVS--ELHLTANQLESI 604
Score = 55 (24.4 bits), Expect = 2.0e-14, Sum P(4) = 2.0e-14
Identities = 20/87 (22%), Positives = 40/87 (45%)
Query: 337 GTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFVDNIQLETVIIN 396
G + L L GN +++ F L++L+L+ +N ++ I AF D L + +
Sbjct: 355 GLRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLNA-NKINCIRPDAFQDLQNLSLLSLY 413
Query: 397 ENMNLKQLPSKLFQGNTNLKSVSLKGN 423
+N ++ L F ++++ L N
Sbjct: 414 DN-KIQSLAKGTFTSLRAIQTLHLAQN 439
Score = 54 (24.1 bits), Expect = 8.1e-15, Sum P(4) = 8.1e-15
Identities = 15/59 (25%), Positives = 30/59 (50%)
Query: 390 LETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFPLERISFLDLSDNPL 448
L+TV+ N +L+ LP + + N+ + L GN + + + + +DLS+N +
Sbjct: 741 LDTVVRCSNKHLRALPKGIPK---NVTELYLDGNQFTLVPGQLSTFKYLQLVDLSNNKI 796
Score = 53 (23.7 bits), Expect = 2.5e-13, Sum P(3) = 2.5e-13
Identities = 15/59 (25%), Positives = 26/59 (44%)
Query: 244 TLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
T + L ++ + +S L L LS N I +AF+ L SL+L+ ++
Sbjct: 782 TFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLH 840
Score = 50 (22.7 bits), Expect = 2.1e-22, Sum P(4) = 2.1e-22
Identities = 14/37 (37%), Positives = 18/37 (48%)
Query: 260 AIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSL 296
+IP S L +DLS N + I AF+ L SL
Sbjct: 323 SIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSL 359
Score = 48 (22.0 bits), Expect = 3.4e-22, Sum P(4) = 3.4e-22
Identities = 11/34 (32%), Positives = 21/34 (61%)
Query: 269 LSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
L +L +L L GN +++ F L++L+L+ +N
Sbjct: 356 LRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLN 389
Score = 48 (22.0 bits), Expect = 4.3e-13, Sum P(2) = 4.3e-13
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 513 KCSSPPDIKGLEVKAVPENSVHC 535
+CS P ++GL V V ++ C
Sbjct: 241 QCSGPASLRGLNVAEVQKSEFSC 263
Score = 47 (21.6 bits), Expect = 1.0e-12, Sum P(3) = 1.0e-12
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 265 QLSKLSALVNLDLSGNNFSNIDSVAFKSLFSL 296
QLS L +DLS N S++ + +F ++ L
Sbjct: 779 QLSTFKYLQLVDLSNNKISSLSNSSFTNMSQL 810
Score = 43 (20.2 bits), Expect = 2.6e-12, Sum P(3) = 2.6e-12
Identities = 23/97 (23%), Positives = 39/97 (40%)
Query: 419 SLKGNSLSHLEASHFPLE------RISFLDLSDN--PLHCDCNXXXXX---XXXXXXXKS 467
SL+G +++ ++ S F R+ LS P C C+ +
Sbjct: 247 SLRGLNVAEVQKSEFSCSGQGEAGRVPTCTLSSGSCPAMCTCSNGIVDCRGKGLTAIPAN 306
Query: 468 TMETTT-VAYEMTSNTSISPGTTTEAQRVDRI-IKNN 502
ET T + E+ SI PG + +++ RI + NN
Sbjct: 307 LPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNN 343
Score = 42 (19.8 bits), Expect = 6.7e-23, Sum P(4) = 6.7e-23
Identities = 6/24 (25%), Positives = 12/24 (50%)
Query: 513 KCSSPPDIKGLEVKAVPENSVHCE 536
+C+ P D++G + P C+
Sbjct: 892 RCAGPQDMEGKLLLTTPAKKFECQ 915
Score = 39 (18.8 bits), Expect = 1.9e-19, Sum P(4) = 1.9e-19
Identities = 8/30 (26%), Positives = 15/30 (50%)
Query: 507 IVLNNLKCSSPPDIKGLEVKAVPENSVHCE 536
IV N +C +P ++ + ++ V CE
Sbjct: 691 IVTGNPRCQNPDFLRQIPLQDVAFPDFRCE 720
>UNIPROTKB|F1NHG5 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0001656
"metanephros development" evidence=IEA] [GO:0001657 "ureteric bud
development" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001933 "negative regulation of
protein phosphorylation" evidence=IEA] [GO:0002042 "cell migration
involved in sprouting angiogenesis" evidence=IEA] [GO:0005095
"GTPase inhibitor activity" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0008201 "heparin binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0010593
"negative regulation of lamellipodium assembly" evidence=IEA]
[GO:0010596 "negative regulation of endothelial cell migration"
evidence=IEA] [GO:0010629 "negative regulation of gene expression"
evidence=IEA] [GO:0016337 "cell-cell adhesion" evidence=IEA]
[GO:0021836 "chemorepulsion involved in postnatal olfactory bulb
interneuron migration" evidence=IEA] [GO:0021972 "corticospinal
neuron axon guidance through spinal cord" evidence=IEA] [GO:0030308
"negative regulation of cell growth" evidence=IEA] [GO:0030837
"negative regulation of actin filament polymerization"
evidence=IEA] [GO:0031290 "retinal ganglion cell axon guidance"
evidence=IEA] [GO:0032870 "cellular response to hormone stimulus"
evidence=IEA] [GO:0033563 "dorsal/ventral axon guidance"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043116 "negative regulation of vascular
permeability" evidence=IEA] [GO:0043237 "laminin-1 binding"
evidence=IEA] [GO:0043394 "proteoglycan binding" evidence=IEA]
[GO:0045499 "chemorepellent activity" evidence=IEA] [GO:0048495
"Roundabout binding" evidence=IEA] [GO:0048754 "branching
morphogenesis of an epithelial tube" evidence=IEA] [GO:0048846
"axon extension involved in axon guidance" evidence=IEA]
[GO:0050929 "induction of negative chemotaxis" evidence=IEA]
[GO:0051058 "negative regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0051414 "response to cortisol
stimulus" evidence=IEA] [GO:0060763 "mammary duct terminal end bud
growth" evidence=IEA] [GO:0061364 "apoptotic process involved in
luteolysis" evidence=IEA] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IEA] [GO:0071504
"cellular response to heparin" evidence=IEA] [GO:0071672 "negative
regulation of smooth muscle cell chemotaxis" evidence=IEA]
[GO:0071676 "negative regulation of mononuclear cell migration"
evidence=IEA] [GO:0090024 "negative regulation of neutrophil
chemotaxis" evidence=IEA] [GO:0090260 "negative regulation of
retinal ganglion cell axon guidance" evidence=IEA] [GO:0090288
"negative regulation of cellular response to growth factor
stimulus" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005737
GO:GO:0008285 GO:GO:0005615 GO:GO:0009986 GO:GO:0030308
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0008201 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0043065 GO:GO:0071504 GO:GO:0005095
GO:GO:0016337 PROSITE:PS01186 GO:GO:0032870 GO:GO:0030837
GO:GO:0010629 InterPro:IPR003645 InterPro:IPR001791 Pfam:PF00054
SMART:SM00274 SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025
GO:GO:0071672 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 GO:GO:0010596 GO:GO:0001933
GO:GO:0071676 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 GO:GO:0070100 GO:GO:0090288 GO:GO:0045499
Pfam:PF01463 GO:GO:0010593 GO:GO:0051414
GeneTree:ENSGT00700000104083 GO:GO:0050929 GO:GO:0090024
GO:GO:0051058 OMA:RHKMFKG EMBL:AADN02015249 EMBL:AADN02015250
EMBL:AADN02015251 EMBL:AADN02015252 EMBL:AADN02015253
EMBL:AADN02015254 EMBL:AADN02015255 EMBL:AADN02015256
EMBL:AADN02015257 EMBL:AADN02015258 EMBL:AADN02015259
EMBL:AADN02015260 EMBL:AADN02015261 EMBL:AADN02015262
EMBL:AADN02015263 EMBL:AADN02015264 EMBL:AADN02015265
EMBL:AADN02015266 EMBL:AADN02015267 EMBL:AADN02015268
EMBL:AADN02015269 EMBL:AADN02015270 EMBL:AADN02015271
IPI:IPI00883181 Ensembl:ENSGALT00000023294 ArrayExpress:F1NHG5
Uniprot:F1NHG5
Length = 1525
Score = 205 (77.2 bits), Expect = 4.0e-12, Sum P(2) = 4.0e-12
Identities = 48/135 (35%), Positives = 72/135 (53%)
Query: 22 CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSFYIELRSLDL 81
CP+ C C D + C++ GL+ +P + +V + L N+ + V LS Y L +DL
Sbjct: 723 CPAECTCLDTVVR--CSNKGLKALPKGIPKDVTELYLDGNQFTLVPKELSNYKHLTLIDL 780
Query: 82 SVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTA 141
S N+I+ L + +F +LL L +SYN + + TF GLK L+ L L N ISV+ + A
Sbjct: 781 SNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPARTFDGLKSLRLLSLHGNDISVVPEGA 840
Query: 142 FRDTLHLELLILSFN 156
F D L L + N
Sbjct: 841 FNDLSALSHLAIGAN 855
Score = 201 (75.8 bits), Expect = 6.7e-23, Sum P(4) = 6.7e-23
Identities = 57/188 (30%), Positives = 92/188 (48%)
Query: 22 CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYT-LSFYIELRSLD 80
CP++C C ++ C L VP + + + L N I+ + T + LR L
Sbjct: 24 CPAQCSCSGSTVD--CHGLALRGVPRNIPRNTERLDLNGNNITRITKTDFAGLRHLRVLQ 81
Query: 81 LSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKT 140
L NKI+ + F+ +L L ++ N + LS+ F G +L LDLS N+I I +
Sbjct: 82 LMENKISTIERGAFQDLKELERLRLNRNNLQLLSELLFLGTPKLYRLDLSENQIQAIPRK 141
Query: 141 AFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLH 200
AFR + ++ L L +N I+ ED F +L+ L +L L+NN I + +++P
Sbjct: 142 AFRGAVDIKNLQLDYNQISCIEDGA-FRALRDLEVLTLNNNNITRLSVASFNHMPKLRTF 200
Query: 201 YLYLNENL 208
L+ N NL
Sbjct: 201 RLHSN-NL 207
Score = 178 (67.7 bits), Expect = 2.0e-18, Sum P(4) = 2.0e-18
Identities = 52/164 (31%), Positives = 82/164 (50%)
Query: 22 CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHY-TLSFYIELRSLD 80
CP+ C C + ++ C GL +P L + I L +N I + S Y +LR +D
Sbjct: 269 CPAACTCSNNIVD--CRGKGLTEIPTNLPETITEIRLEQNSIKVIPPGAFSPYKKLRRID 326
Query: 81 LSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKT 140
LS N+I+ F+ L +L + N+I+ L K F+GL L+ L L+ NKI+ +
Sbjct: 327 LSNNQISEAAPDAFQGLRSLNSLVLYGNKITELPKGLFEGLFSLQLLLLNANKINCLRVD 386
Query: 141 AFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQIL 184
AF+D +L LL L N + FS L++++ L L N +
Sbjct: 387 AFQDLHNLNLLSLYDNKLQTIAKGT-FSPLRAIQTLHLAQNPFI 429
Score = 156 (60.0 bits), Expect = 1.3e-16, Sum P(3) = 1.3e-16
Identities = 46/159 (28%), Positives = 73/159 (45%)
Query: 22 CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSF--YIELRSL 79
CP +C+C + C++ L +P + + L N S + T F +LR +
Sbjct: 502 CPEKCRC--EGTTVDCSNQKLNKIPDHIPQYTAELRLNNNEFSVLEATGIFKKLPQLRKI 559
Query: 80 DLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINK 139
+LS NKI + F+ + + L ++ N + + FKGL+ LKTL L N++S +
Sbjct: 560 NLSNNKITDIEEGAFDGASGVNELLLTSNRLETVRDKMFKGLESLKTLMLRSNRVSCVGN 619
Query: 140 TAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKL 178
+F + LL L N IT F +L SL L L
Sbjct: 620 DSFTGLSSVRLLSLYDNQITTVAPGS-FDTLHSLSTLNL 657
Score = 155 (59.6 bits), Expect = 6.6e-16, Sum P(4) = 6.6e-16
Identities = 44/151 (29%), Positives = 74/151 (49%)
Query: 76 LRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKIS 135
+ + L N I V+ F KL +++S N+IS + D F+GL+ L +L L NKI+
Sbjct: 298 ITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISEAAPDAFQGLRSLNSLVLYGNKIT 357
Query: 136 VINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLP 195
+ K F L+LL+L+ N I + F L +L +L L +N++ + S P
Sbjct: 358 ELPKGLFEGLFSLQLLLLNANKINCLR-VDAFQDLHNLNLLSLYDNKLQTIAKGTFS--P 414
Query: 196 HQSLHYLYLNENLIETVLDNSFPFTLTNLHT 226
+++ L+L +N + D + LHT
Sbjct: 415 LRAIQTLHLAQNPF--ICDCHLKWLADYLHT 443
Score = 145 (56.1 bits), Expect = 1.0e-16, Sum P(4) = 1.0e-16
Identities = 42/127 (33%), Positives = 62/127 (48%)
Query: 103 LNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFE 162
L+++ N I+ ++K F GL+ L+ L L NKIS I + AF+D LE L L+ NN+
Sbjct: 56 LDLNGNNITRITKTDFAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNNLQLLS 115
Query: 163 DSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLT 222
+ +F L L L NQI +P + L L+ N I + D +F L
Sbjct: 116 EL-LFLGTPKLYRLDLSENQIQAIPRKAFRGAV--DIKNLQLDYNQISCIEDGAFR-ALR 171
Query: 223 NLHTLAL 229
+L L L
Sbjct: 172 DLEVLTL 178
Score = 141 (54.7 bits), Expect = 6.7e-23, Sum P(4) = 6.7e-23
Identities = 42/123 (34%), Positives = 67/123 (54%)
Query: 335 PLGTLK-CDRLDLSGNNFSNIDSVAFKSLFSLK-LVKINLIPN-LDSIDQRAFVDNIQLE 391
P G K L L GN F+ + K L + K L I+L N + ++ ++F + QL
Sbjct: 745 PKGIPKDVTELYLDGNQFTLVP----KELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLL 800
Query: 392 TVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHF-PLERISFLDLSDNPLHC 450
T+I++ N L+ +P++ F G +L+ +SL GN +S + F L +S L + NPL+C
Sbjct: 801 TLILSYN-RLRCIPARTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 859
Query: 451 DCN 453
DCN
Sbjct: 860 DCN 862
Score = 127 (49.8 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 34/105 (32%), Positives = 54/105 (51%)
Query: 103 LNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFE 162
L + N+ + + K+ K L +DLS N+IS ++ +F + L LILS+N +
Sbjct: 755 LYLDGNQFTLVPKE-LSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIP 813
Query: 163 DSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNEN 207
+ F LKSLR+L L N I VP ++L +L +L + N
Sbjct: 814 -ARTFDGLKSLRLLSLHGNDISVVPEGAFNDL--SALSHLAIGAN 855
Score = 118 (46.6 bits), Expect = 3.6e-19, Sum P(3) = 3.6e-19
Identities = 38/116 (32%), Positives = 53/116 (45%)
Query: 340 KCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINEN 398
K R+DLS N S AF+ L SL + L N + + + F L+ +++N N
Sbjct: 321 KLRRIDLSNNQISEAAPDAFQGLRSLN--SLVLYGNKITELPKGLFEGLFSLQLLLLNAN 378
Query: 399 MNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHF-PLERISFLDLSDNPLHCDCN 453
+ L FQ NL +SL N L + F PL I L L+ NP CDC+
Sbjct: 379 -KINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTLHLAQNPFICDCH 433
Score = 104 (41.7 bits), Expect = 3.2e-11, Sum P(3) = 3.2e-11
Identities = 40/148 (27%), Positives = 68/148 (45%)
Query: 16 KLNKAICPSRCQCFDQKLEASCTDAG-LEVVPI-QLNPEVQTIILRENRISNVHY-TLSF 72
KLNK P + +L + + LE I + P+++ I L N+I+++
Sbjct: 519 KLNKI--PDHIPQYTAELRLNNNEFSVLEATGIFKKLPQLRKINLSNNKITDIEEGAFDG 576
Query: 73 YIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYN 132
+ L L+ N++ + F+ L L + N +S + D+F GL ++ L L N
Sbjct: 577 ASGVNELLLTSNRLETVRDKMFKGLESLKTLMLRSNRVSCVGNDSFTGLSSVRLLSLYDN 636
Query: 133 KISVINKTAFRDTLH----LELLILSFN 156
+I+ + +F DTLH L LL FN
Sbjct: 637 QITTVAPGSF-DTLHSLSTLNLLANPFN 663
Score = 102 (41.0 bits), Expect = 6.0e-19, Sum P(4) = 6.0e-19
Identities = 33/108 (30%), Positives = 57/108 (52%)
Query: 344 LDLSGNNFSNIDSVA-FKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNL 401
L L+ N FS +++ FK L L+ KINL N + I++ AF + +++ N L
Sbjct: 534 LRLNNNEFSVLEATGIFKKLPQLR--KINLSNNKITDIEEGAFDGASGVNELLLTSN-RL 590
Query: 402 KQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPL 448
+ + K+F+G +LK++ L+ N +S + F L + L L DN +
Sbjct: 591 ETVRDKMFKGLESLKTLMLRSNRVSCVGNDSFTGLSSVRLLSLYDNQI 638
Score = 102 (41.0 bits), Expect = 5.1e-11, Sum P(3) = 5.1e-11
Identities = 40/158 (25%), Positives = 60/158 (37%)
Query: 126 TLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILD 185
T+D S K++ I + T L L + N + E + IF L LR + L NN+I D
Sbjct: 512 TVDCSNQKLNKIPDHIPQYTAELRL---NNNEFSVLEATGIFKKLPQLRKINLSNNKITD 568
Query: 186 VPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTL 245
+ ++ L L N +ETV D F L +L TL L L
Sbjct: 569 IEEGAFDGA--SGVNELLLTSNRLETVRDKMFK-GLESLKTLMLRSNRVSCVGNDSFTGL 625
Query: 246 RTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFS 283
++ + L +L L+L N F+
Sbjct: 626 SSVRLLSLYDNQITTVAPGSFDTLHSLSTLNLLANPFN 663
Score = 100 (40.3 bits), Expect = 3.4e-12, Sum P(4) = 3.4e-12
Identities = 31/96 (32%), Positives = 47/96 (48%)
Query: 122 KELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNN 181
+ + LDL+ N I+ I KT F HL +L L N I+ E F LK L L+L+ N
Sbjct: 51 RNTERLDLNGNNITRITKTDFAGLRHLRVLQLMENKISTIERGA-FQDLKELERLRLNRN 109
Query: 182 QILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSF 217
+ + + P L+ L L+EN I+ + +F
Sbjct: 110 NLQLLSELLFLGTP--KLYRLDLSENQIQAIPRKAF 143
Score = 95 (38.5 bits), Expect = 3.1e-18, Sum P(4) = 3.1e-18
Identities = 27/113 (23%), Positives = 60/113 (53%)
Query: 343 RLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNL 401
+++LS N ++I+ AF + ++ L N L+++ + F L+T+++ N +
Sbjct: 558 KINLSNNKITDIEEGAFDGASGVN--ELLLTSNRLETVRDKMFKGLESLKTLMLRSN-RV 614
Query: 402 KQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPLHCDCN 453
+ + F G ++++ +SL N ++ + F L +S L+L NP +C+C+
Sbjct: 615 SCVGNDSFTGLSSVRLLSLYDNQITTVAPGSFDTLHSLSTLNLLANPFNCNCH 667
Score = 88 (36.0 bits), Expect = 1.4e-13, Sum P(3) = 1.4e-13
Identities = 33/110 (30%), Positives = 46/110 (41%)
Query: 171 KSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALX 230
K + L LD NQ VP LSN H +L + L+ N I T+ + SF +T L TL L
Sbjct: 750 KDVTELYLDGNQFTLVPKE-LSNYKHLTL--IDLSNNRISTLSNQSFS-NMTQLLTLILS 805
Query: 231 XXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGN 280
L++L +P + LSAL +L + N
Sbjct: 806 YNRLRCIPARTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGAN 855
Score = 86 (35.3 bits), Expect = 2.1e-09, Sum P(3) = 2.1e-09
Identities = 34/127 (26%), Positives = 49/127 (38%)
Query: 176 LKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXX 235
L L+ N I + + L H L L L EN I T+ +F L L L L
Sbjct: 56 LDLNGNNITRITKTDFAGLRH--LRVLQLMENKISTIERGAFQ-DLKELERLRLNRNNLQ 112
Query: 236 XXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFS 295
+ L+ AIP K + NL L N S I+ AF++L
Sbjct: 113 LLSELLFLGTPKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRD 172
Query: 296 LKLVKIN 302
L+++ +N
Sbjct: 173 LEVLTLN 179
Score = 58 (25.5 bits), Expect = 4.8e-13, Sum P(3) = 4.8e-13
Identities = 21/87 (24%), Positives = 40/87 (45%)
Query: 337 GTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFVDNIQLETVIIN 396
G + L L GN + + F+ LFSL+L+ +N ++ + AF D L + +
Sbjct: 342 GLRSLNSLVLYGNKITELPKGLFEGLFSLQLLLLNA-NKINCLRVDAFQDLHNLNLLSLY 400
Query: 397 ENMNLKQLPSKLFQGNTNLKSVSLKGN 423
+N L+ + F ++++ L N
Sbjct: 401 DN-KLQTIAKGTFSPLRAIQTLHLAQN 426
Score = 56 (24.8 bits), Expect = 6.7e-23, Sum P(4) = 6.7e-23
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 269 LSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
L +L +L L GN + + F+ LFSL+L+ +N
Sbjct: 343 LRSLNSLVLYGNKITELPKGLFEGLFSLQLLLLN 376
Score = 56 (24.8 bits), Expect = 6.7e-23, Sum P(4) = 6.7e-23
Identities = 26/126 (20%), Positives = 51/126 (40%)
Query: 180 NNQILDVPNNVLSNLPH---QSLHYLYLNENLIETVLDNSF-PFTLTNLHTLALXXXXXX 235
+N I+D L+ +P +++ + L +N I+ + +F P+ L + L
Sbjct: 276 SNNIVDCRGKGLTEIPTNLPETITEIRLEQNSIKVIPPGAFSPYK--KLRRIDLSNNQIS 333
Query: 236 XXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFS 295
LR+L+ +P L +L L L+ N + + AF+ L +
Sbjct: 334 EAAPDAFQGLRSLNSLVLYGNKITELPKGLFEGLFSLQLLLLNANKINCLRVDAFQDLHN 393
Query: 296 LKLVKI 301
L L+ +
Sbjct: 394 LNLLSL 399
Score = 54 (24.1 bits), Expect = 5.5e-14, Sum P(5) = 5.5e-14
Identities = 17/57 (29%), Positives = 28/57 (49%)
Query: 390 LETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFPLERISFLDLSDN 446
L+TV+ N LK LP + + T L L GN + + + ++ +DLS+N
Sbjct: 730 LDTVVRCSNKGLKALPKGIPKDVTELY---LDGNQFTLVPKELSNYKHLTLIDLSNN 783
Score = 54 (24.1 bits), Expect = 1.2e-12, Sum P(3) = 1.2e-12
Identities = 15/45 (33%), Positives = 21/45 (46%)
Query: 261 IPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIP 305
IP + L +L L L GN+ S + AF L +L + I P
Sbjct: 812 IPARTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANP 856
Score = 53 (23.7 bits), Expect = 1.6e-12, Sum P(3) = 1.6e-12
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 261 IPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSL 296
+P K+LS L +DLS N S + + +F ++ L
Sbjct: 765 VP-KELSNYKHLTLIDLSNNRISTLSNQSFSNMTQL 799
Score = 46 (21.3 bits), Expect = 6.7e-23, Sum P(4) = 6.7e-23
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 496 DRIIKNNHSLTIVLNNLKCSSPPDIKG 522
D +NN + +NN C PP+ G
Sbjct: 1000 DNDCENNSTCVDGINNYTCLCPPEYTG 1026
Score = 39 (18.8 bits), Expect = 3.9e-12, Sum P(3) = 3.9e-12
Identities = 34/160 (21%), Positives = 56/160 (35%)
Query: 389 QLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNP 447
QL + ++ N + + F G + + + L N L + F LE + L L N
Sbjct: 555 QLRKINLSNN-KITDIEEGAFDGASGVNELLLTSNRLETVRDKMFKGLESLKTLMLRSNR 613
Query: 448 LHCDCNXXXXXXXXXXXXKS-TMETTTVA---YEM-----TSNTSISPGTTT--EAQRVD 496
+ C N + TTVA ++ T N +P A D
Sbjct: 614 VSCVGNDSFTGLSSVRLLSLYDNQITTVAPGSFDTLHSLSTLNLLANPFNCNCHLAWLGD 673
Query: 497 RIIKNNHSLTIVLNNLKCSSPPDIKGLEVKAVPENSVHCE 536
+ K IV N +C P +K + ++ V C+
Sbjct: 674 WLRKKR----IVTGNPRCQKPYFLKEIPIQDVAIQDFTCD 709
Score = 37 (18.1 bits), Expect = 5.5e-22, Sum P(4) = 5.5e-22
Identities = 9/28 (32%), Positives = 10/28 (35%)
Query: 496 DRIIKNNHSLTIVLNNLKCSSPPDIKGL 523
D KN T +N C P GL
Sbjct: 1078 DNKCKNGAQCTDAVNGYTCICPEGYSGL 1105
Score = 37 (18.1 bits), Expect = 5.7e-21, Sum P(4) = 5.7e-21
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 270 SALVNLDLSGNNFSNIDSVAFKSLFSLKLVKI 301
S + L L+ N + FK L SLK + +
Sbjct: 578 SGVNELLLTSNRLETVRDKMFKGLESLKTLML 609
Score = 37 (18.1 bits), Expect = 5.5e-14, Sum P(5) = 5.5e-14
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 337 GTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKI 370
G + L L+ N + FK L SLK + +
Sbjct: 576 GASGVNELLLTSNRLETVRDKMFKGLESLKTLML 609
>UNIPROTKB|Q1KS52 [details] [associations]
symbol:ALS "Acid-labile subunit" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005634 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 CTD:3483
HOVERGEN:HBG000327 OrthoDB:EOG4FFD1R InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GeneTree:ENSGT00690000101816
HOGENOM:HOG000116109 OMA:FCGLGEL EMBL:CU929968 EMBL:DQ459343
EMBL:DQ459344 RefSeq:NP_001041651.1 UniGene:Ssc.16015 STRING:Q1KS52
Ensembl:ENSSSCT00000008781 GeneID:397322 KEGG:ssc:397322
Uniprot:Q1KS52
Length = 606
Score = 270 (100.1 bits), Expect = 8.0e-23, Sum P(2) = 8.0e-23
Identities = 102/379 (26%), Positives = 158/379 (41%)
Query: 76 LRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKIS 135
L L L N++ L +H F + L +L + N +S + + F+GL L L+L +N ++
Sbjct: 124 LYHLHLERNQLRSLAAHTFLHTPGLASLGLHNNLLSRVEEGLFQGLTNLWDLNLGWNSLA 183
Query: 136 VINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLP 195
V+ TAF +L L+L+ N +TY + + +F L LR L L N + V NV LP
Sbjct: 184 VLPDTAFHGLANLRELVLAGNKLTYLQPA-LFCGLGELRELDLSRNALRSVKANVFVKLP 242
Query: 196 HQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXX 255
L LYL+ NL+ V +F + L L L L LH
Sbjct: 243 --KLQKLYLDHNLLAAVAPGAF-LGMKALRWLDLSHNRVGGLLEDTFPGLLGLHVLRLAH 299
Query: 256 XXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQXXX 315
++ + L L L L N + AF+ L L+++ +N + I
Sbjct: 300 NALASLRPRTFKDLHFLEELQLGHNRLRQLPEKAFEGLGQLEVLALN-DNQIQEIKAGAF 358
Query: 316 XXXXXXXXXXXXXXAFSLTP----LGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKIN 371
P G K L L + + F L L+ ++
Sbjct: 359 LGLFNVAVMNLSGNCLRNLPEQVFRGLGKLHSLHLEHSCLGRVGLHTFAGLSGLR--RLF 416
Query: 372 LIPN-LDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEA 430
L N L++ID+++ +L + + N L LP +LFQG L+ + L N LS L A
Sbjct: 417 LKDNGLEAIDEQSLWGLAELLELDLTAN-RLTHLPGRLFQGLGKLEYLLLSRNRLSALPA 475
Query: 431 SHF-PLERISFLDLSDNPL 448
PL+R +LD+S N L
Sbjct: 476 DALGPLQRTFWLDVSHNRL 494
Score = 184 (69.8 bits), Expect = 4.2e-13, Sum P(2) = 4.2e-13
Identities = 67/256 (26%), Positives = 116/256 (45%)
Query: 53 VQTIILRENRISNVHYTLSFYI-ELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEIS 111
++ ++L N+++ + L + ELR LDLS N + + ++ F KL L + +N ++
Sbjct: 196 LRELVLAGNKLTYLQPALFCGLGELRELDLSRNALRSVKANVFVKLPKLQKLYLDHNLLA 255
Query: 112 ALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLK 171
A++ F G+K L+ LDLS+N++ + + F L L +L L+ N + F L
Sbjct: 256 AVAPGAFLGMKALRWLDLSHNRVGGLLEDTFPGLLGLHVLRLAHNALASLRP-RTFKDLH 314
Query: 172 SLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXX 231
L L+L +N++ +P L L L LN+N I+ + +F L N+ + L
Sbjct: 315 FLEELQLGHNRLRQLPEKAFEGLGQ--LEVLALNDNQIQEIKAGAF-LGLFNVAVMNLSG 371
Query: 232 XXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFK 291
L LH + + LS L L L N ID +
Sbjct: 372 NCLRNLPEQVFRGLGKLHSLHLEHSCLGRVGLHTFAGLSGLRRLFLKDNGLEAIDE---Q 428
Query: 292 SLFSL-KLVKINLIPN 306
SL+ L +L++++L N
Sbjct: 429 SLWGLAELLELDLTAN 444
Score = 144 (55.7 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 76/305 (24%), Positives = 123/305 (40%)
Query: 151 LILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIE 210
L L NN + + F +L SL L L + + + L L Q+L++L+L N +
Sbjct: 79 LWLDSNNFSSVP-AGAFRNLSSLGFLNLQGSGLASLEPQALLGL--QNLYHLHLERNQLR 135
Query: 211 TVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLS 270
++ ++F T L +L L L L +P L+
Sbjct: 136 SLAAHTFLHT-PGLASLGLHNNLLSRVEEGLFQGLTNLWDLNLGWNSLAVLPDTAFHGLA 194
Query: 271 ALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQXXXXXXXXXXXXXXXXX 329
L L L+GN + + F L L+ +++L N L S+
Sbjct: 195 NLRELVLAGNKLTYLQPALFCGLGELR--ELDLSRNALRSVKANVFVKLPKLQKLYLDHN 252
Query: 330 AFSLTPLGT---LKCDR-LDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRAF 384
+ G +K R LDLS N + F L L +++ L N L S+ R F
Sbjct: 253 LLAAVAPGAFLGMKALRWLDLSHNRVGGLLEDTFPGLLGLHVLR--LAHNALASLRPRTF 310
Query: 385 VDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHF-PLERISFLDL 443
D LE + + N L+QLP K F+G L+ ++L N + ++A F L ++ ++L
Sbjct: 311 KDLHFLEELQLGHN-RLRQLPEKAFEGLGQLEVLALNDNQIQEIKAGAFLGLFNVAVMNL 369
Query: 444 SDNPL 448
S N L
Sbjct: 370 SGNCL 374
Score = 135 (52.6 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 57/245 (23%), Positives = 99/245 (40%)
Query: 58 LRENRISNV-HYTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKD 116
L NR+ + T + L L L+ N + L F+ + L L + +N + L +
Sbjct: 273 LSHNRVGGLLEDTFPGLLGLHVLRLAHNALASLRPRTFKDLHFLEELQLGHNRLRQLPEK 332
Query: 117 TFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRIL 176
F+GL +L+ L L+ N+I I AF ++ ++ LS N + + ++F L L L
Sbjct: 333 AFEGLGQLEVLALNDNQIQEIKAGAFLGLFNVAVMNLSGNCLRNLPE-QVFRGLGKLHSL 391
Query: 177 KLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXX 236
L+++ + V + + L L L+L +N +E + + S + L L L L
Sbjct: 392 HLEHSCLGRVGLHTFAGL--SGLRRLFLKDNGLEAIDEQSL-WGLAELLELDLTANRLTH 448
Query: 237 XXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSL 296
L L A+P L L LD+S N + L L
Sbjct: 449 LPGRLFQGLGKLEYLLLSRNRLSALPADALGPLQRTFWLDVSHNRLQALPEAVLAPLGQL 508
Query: 297 KLVKI 301
+ + +
Sbjct: 509 RYLSL 513
Score = 125 (49.1 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 39/137 (28%), Positives = 68/137 (49%)
Query: 75 ELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKI 134
+L SL L + + +G H F + L L + N + A+ + + GL EL LDL+ N++
Sbjct: 387 KLHSLHLEHSCLGRVGLHTFAGLSGLRRLFLKDNGLEAIDEQSLWGLAELLELDLTANRL 446
Query: 135 SVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNL 194
+ + F+ LE L+LS N ++ ++ L+ L + +N++ +P VL+
Sbjct: 447 THLPGRLFQGLGKLEYLLLSRNRLSALP-ADALGPLQRTFWLDVSHNRLQALPEAVLA-- 503
Query: 195 PHQSLHYLYLNENLIET 211
P L YL L N + T
Sbjct: 504 PLGQLRYLSLRNNSLRT 520
Score = 110 (43.8 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 37/162 (22%), Positives = 75/162 (46%)
Query: 52 EVQTIILRENRISNVHYTLSFYI-ELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEI 110
+++ + L +N+I + + + ++LS N + L F KL +L++ ++ +
Sbjct: 339 QLEVLALNDNQIQEIKAGAFLGLFNVAVMNLSGNCLRNLPEQVFRGLGKLHSLHLEHSCL 398
Query: 111 SALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSL 170
+ TF GL L+ L L N + I++ + L L L+ N +T+ +F L
Sbjct: 399 GRVGLHTFAGLSGLRRLFLKDNGLEAIDEQSLWGLAELLELDLTANRLTHLP-GRLFQGL 457
Query: 171 KSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETV 212
L L L N++ +P + L P Q +L ++ N ++ +
Sbjct: 458 GKLEYLLLSRNRLSALPADALG--PLQRTFWLDVSHNRLQAL 497
Score = 102 (41.0 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 30/110 (27%), Positives = 53/110 (48%)
Query: 53 VQTIILRENRISNV-HYTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEIS 111
++ + L++N + + +L EL LDL+ N++ L F+ KL L +S N +S
Sbjct: 412 LRRLFLKDNGLEAIDEQSLWGLAELLELDLTANRLTHLPGRLFQGLGKLEYLLLSRNRLS 471
Query: 112 ALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYF 161
AL D L+ LD+S+N++ + + L L L N++ F
Sbjct: 472 ALPADALGPLQRTFWLDVSHNRLQALPEAVLAPLGQLRYLSLRNNSLRTF 521
Score = 67 (28.6 bits), Expect = 8.0e-23, Sum P(2) = 8.0e-23
Identities = 11/27 (40%), Positives = 19/27 (70%)
Query: 510 NNLKCSSPPDIKGLEVKAVPE-NSVHC 535
NN+ C+SPP + GL+++ + E + HC
Sbjct: 580 NNITCASPPAVSGLDLRDLSEAHFAHC 606
>UNIPROTKB|F1MLJ7 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090288 "negative regulation of cellular response to
growth factor stimulus" evidence=IEA] [GO:0090260 "negative
regulation of retinal ganglion cell axon guidance" evidence=IEA]
[GO:0090024 "negative regulation of neutrophil chemotaxis"
evidence=IEA] [GO:0071676 "negative regulation of mononuclear cell
migration" evidence=IEA] [GO:0071672 "negative regulation of smooth
muscle cell chemotaxis" evidence=IEA] [GO:0071504 "cellular
response to heparin" evidence=IEA] [GO:0070100 "negative regulation
of chemokine-mediated signaling pathway" evidence=IEA] [GO:0061364
"apoptotic process involved in luteolysis" evidence=IEA]
[GO:0060763 "mammary duct terminal end bud growth" evidence=IEA]
[GO:0051414 "response to cortisol stimulus" evidence=IEA]
[GO:0051058 "negative regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0050929 "induction of negative
chemotaxis" evidence=IEA] [GO:0048846 "axon extension involved in
axon guidance" evidence=IEA] [GO:0048754 "branching morphogenesis
of an epithelial tube" evidence=IEA] [GO:0048495 "Roundabout
binding" evidence=IEA] [GO:0045499 "chemorepellent activity"
evidence=IEA] [GO:0043394 "proteoglycan binding" evidence=IEA]
[GO:0043237 "laminin-1 binding" evidence=IEA] [GO:0043116 "negative
regulation of vascular permeability" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0033563 "dorsal/ventral axon guidance" evidence=IEA]
[GO:0032870 "cellular response to hormone stimulus" evidence=IEA]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IEA]
[GO:0030837 "negative regulation of actin filament polymerization"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0021972 "corticospinal neuron axon guidance
through spinal cord" evidence=IEA] [GO:0021836 "chemorepulsion
involved in postnatal olfactory bulb interneuron migration"
evidence=IEA] [GO:0016337 "cell-cell adhesion" evidence=IEA]
[GO:0010629 "negative regulation of gene expression" evidence=IEA]
[GO:0010596 "negative regulation of endothelial cell migration"
evidence=IEA] [GO:0010593 "negative regulation of lamellipodium
assembly" evidence=IEA] [GO:0009986 "cell surface" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0008201 "heparin binding" evidence=IEA]
[GO:0008045 "motor neuron axon guidance" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005615 "extracellular space"
evidence=IEA] [GO:0005095 "GTPase inhibitor activity" evidence=IEA]
[GO:0002042 "cell migration involved in sprouting angiogenesis"
evidence=IEA] [GO:0001933 "negative regulation of protein
phosphorylation" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001657 "ureteric bud development"
evidence=IEA] [GO:0001656 "metanephros development" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005737 GO:GO:0008285 GO:GO:0005615 GO:GO:0009986
GO:GO:0030308 GO:GO:0001701 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0008201 GO:GO:0005509
GO:GO:0043116 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0043065 GO:GO:0008045 GO:GO:0071504
GO:GO:0005095 GO:GO:0016337 PROSITE:PS01186 GO:GO:0032870
GO:GO:0030837 GO:GO:0010629 InterPro:IPR003645 InterPro:IPR001791
Pfam:PF00054 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 GO:GO:0071672 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0001656 GO:GO:0010596 GO:GO:0001657
GO:GO:0001933 GO:GO:0048754 GO:GO:0071676 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
GO:GO:0048846 GO:GO:0060763 GO:GO:0070100 GO:GO:0090288
GO:GO:0033563 GO:GO:0045499 GO:GO:0002042 Pfam:PF01463
GO:GO:0010593 GO:GO:0051414 GeneTree:ENSGT00700000104083
GO:GO:0090260 GO:GO:0021836 GO:GO:0061364 GO:GO:0021972
GO:GO:0050929 GO:GO:0090024 GO:GO:0051058 OMA:RHKMFKG
EMBL:DAAA02017049 IPI:IPI00692425 Ensembl:ENSBTAT00000061059
NextBio:20876291 Uniprot:F1MLJ7
Length = 1532
Score = 203 (76.5 bits), Expect = 6.6e-12, Sum P(2) = 6.6e-12
Identities = 48/135 (35%), Positives = 72/135 (53%)
Query: 22 CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSFYIELRSLDL 81
CP+ C C D + C++ L+V+P + +V + L N+ + V LS Y L +DL
Sbjct: 729 CPAECTCLDTVVR--CSNKALKVLPKGIPRDVTELYLDGNQFTLVPKELSNYKHLTLIDL 786
Query: 82 SVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTA 141
S N+I+ L + +F +LL L +SYN + + TF GLK L+ L L N ISV+ + A
Sbjct: 787 SNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGA 846
Query: 142 FRDTLHLELLILSFN 156
F D L L + N
Sbjct: 847 FNDLAALSHLAIGAN 861
Score = 201 (75.8 bits), Expect = 8.6e-23, Sum P(4) = 8.6e-23
Identities = 59/201 (29%), Positives = 97/201 (48%)
Query: 10 LILA-LTKLNKAICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHY 68
L+LA L ++ CP++C C ++ C L VP + + + L N I+ +
Sbjct: 15 LVLAILNEVAPQACPAQCSCSGSTVD--CHGLALRSVPRNIPRNTERLDLNGNNITRITK 72
Query: 69 T-LSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTL 127
T + LR L L NKI + F+ +L L ++ N + + F G +L L
Sbjct: 73 TDFAGLRHLRVLQLMENKITTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTSKLYRL 132
Query: 128 DLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVP 187
DLS N+I I + AFR + ++ L L +N+I+ ED F +L+ L +L L+NN I +
Sbjct: 133 DLSENQIQAIPRKAFRGAVDIKNLQLDYNHISCIEDGA-FRALRDLEVLTLNNNNITRLS 191
Query: 188 NNVLSNLPHQSLHYLYLNENL 208
+++P L+ N NL
Sbjct: 192 VASFNHMPKLRTFRLHSN-NL 211
Score = 182 (69.1 bits), Expect = 3.1e-19, Sum P(3) = 3.1e-19
Identities = 52/164 (31%), Positives = 83/164 (50%)
Query: 22 CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHY-TLSFYIELRSLD 80
CP+ C C + ++ C GL +P L + I L +N I + S Y +LR +D
Sbjct: 275 CPAACTCSNNIVD--CRGKGLTEIPTNLPETITEIRLEQNSIKVIPPGAFSPYKKLRRID 332
Query: 81 LSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKT 140
LS N+I+ L F+ L +L + N+I+ L K F+GL L+ L L+ NKI+ +
Sbjct: 333 LSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVD 392
Query: 141 AFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQIL 184
AF+D +L LL L N + FS L++++ + L N +
Sbjct: 393 AFQDLHNLNLLSLYDNKLQTIAKGT-FSPLRAIQTMHLAQNPFI 435
Score = 161 (61.7 bits), Expect = 6.2e-17, Sum P(3) = 6.2e-17
Identities = 44/151 (29%), Positives = 76/151 (50%)
Query: 76 LRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKIS 135
+ + L N I V+ F KL +++S N+IS L+ D F+GL+ L +L L NKI+
Sbjct: 304 ITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKIT 363
Query: 136 VINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLP 195
+ K+ F L+LL+L+ N I + F L +L +L L +N++ + S P
Sbjct: 364 ELPKSLFEGLFSLQLLLLNANKINCLR-VDAFQDLHNLNLLSLYDNKLQTIAKGTFS--P 420
Query: 196 HQSLHYLYLNENLIETVLDNSFPFTLTNLHT 226
+++ ++L +N + D + LHT
Sbjct: 421 LRAIQTMHLAQNPF--ICDCHLKWLADYLHT 449
Score = 147 (56.8 bits), Expect = 2.0e-15, Sum P(3) = 2.0e-15
Identities = 45/159 (28%), Positives = 72/159 (45%)
Query: 22 CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSF--YIELRSL 79
CP +C+C + C++ L +P + + L N + + T F +LR +
Sbjct: 508 CPEKCRC--EGTTVDCSNQKLTKIPDHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKI 565
Query: 80 DLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINK 139
+ S NKI + FE + + + ++ N + + FKGL+ LKTL L N+IS +
Sbjct: 566 NFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRISCVGN 625
Query: 140 TAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKL 178
+F + LL L N IT F +L SL L L
Sbjct: 626 DSFIGLSSVRLLSLYDNQITTIAPGA-FDTLHSLSTLNL 663
Score = 142 (55.0 bits), Expect = 2.7e-16, Sum P(4) = 2.7e-16
Identities = 41/127 (32%), Positives = 63/127 (49%)
Query: 103 LNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFE 162
L+++ N I+ ++K F GL+ L+ L L NKI+ I + AF+D LE L L+ N++ F
Sbjct: 60 LDLNGNNITRITKTDFAGLRHLRVLQLMENKITTIERGAFQDLKELERLRLNRNHLQLFP 119
Query: 163 DSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLT 222
+ +F L L L NQI +P + L L+ N I + D +F L
Sbjct: 120 EL-LFLGTSKLYRLDLSENQIQAIPRKAFRGAV--DIKNLQLDYNHISCIEDGAFR-ALR 175
Query: 223 NLHTLAL 229
+L L L
Sbjct: 176 DLEVLTL 182
Score = 139 (54.0 bits), Expect = 8.6e-23, Sum P(4) = 8.6e-23
Identities = 42/128 (32%), Positives = 68/128 (53%)
Query: 330 AFSLTPLGTLK-CDRLDLSGNNFSNIDSVAFKSLFSLK-LVKINLIPN-LDSIDQRAFVD 386
A + P G + L L GN F+ + K L + K L I+L N + ++ ++F +
Sbjct: 746 ALKVLPKGIPRDVTELYLDGNQFTLVP----KELSNYKHLTLIDLSNNRISTLSNQSFSN 801
Query: 387 NIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHF-PLERISFLDLSD 445
QL T+I++ N L+ +P + F G +L+ +SL GN +S + F L +S L +
Sbjct: 802 MTQLLTLILSYN-RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLAALSHLAIGA 860
Query: 446 NPLHCDCN 453
NPL+CDCN
Sbjct: 861 NPLYCDCN 868
Score = 120 (47.3 bits), Expect = 2.3e-19, Sum P(3) = 2.3e-19
Identities = 37/116 (31%), Positives = 54/116 (46%)
Query: 340 KCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINEN 398
K R+DLS N S + AF+ L SL + L N + + + F L+ +++N N
Sbjct: 327 KLRRIDLSNNQISELAPDAFQGLRSLN--SLVLYGNKITELPKSLFEGLFSLQLLLLNAN 384
Query: 399 MNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHF-PLERISFLDLSDNPLHCDCN 453
+ L FQ NL +SL N L + F PL I + L+ NP CDC+
Sbjct: 385 -KINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCH 439
Score = 107 (42.7 bits), Expect = 9.2e-13, Sum P(4) = 9.2e-13
Identities = 34/96 (35%), Positives = 47/96 (48%)
Query: 122 KELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNN 181
+ + LDL+ N I+ I KT F HL +L L N IT E F LK L L+L+ N
Sbjct: 55 RNTERLDLNGNNITRITKTDFAGLRHLRVLQLMENKITTIERGA-FQDLKELERLRLNRN 113
Query: 182 QILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSF 217
+ P L L L+ L L+EN I+ + +F
Sbjct: 114 HLQLFPE--LLFLGTSKLYRLDLSENQIQAIPRKAF 147
Score = 99 (39.9 bits), Expect = 9.8e-19, Sum P(4) = 9.8e-19
Identities = 31/108 (28%), Positives = 56/108 (51%)
Query: 344 LDLSGNNFSNIDSVA-FKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNL 401
L L+ N F+ +++ FK L L+ KIN N + I++ AF + +++ N L
Sbjct: 540 LRLNNNEFTVLEATGIFKKLPQLR--KINFSNNKITDIEEGAFEGASGVNEILLTSN-RL 596
Query: 402 KQLPSKLFQGNTNLKSVSLKGNSLSHLEASHF-PLERISFLDLSDNPL 448
+ + K+F+G +LK++ L+ N +S + F L + L L DN +
Sbjct: 597 ENVQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLSSVRLLSLYDNQI 644
Score = 95 (38.5 bits), Expect = 2.5e-18, Sum P(4) = 2.5e-18
Identities = 27/112 (24%), Positives = 59/112 (52%)
Query: 343 RLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNL 401
+++ S N ++I+ AF+ + +I L N L+++ + F L+T+++ N +
Sbjct: 564 KINFSNNKITDIEEGAFEGASGVN--EILLTSNRLENVQHKMFKGLESLKTLMLRSN-RI 620
Query: 402 KQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPLHCDC 452
+ + F G ++++ +SL N ++ + F L +S L+L NP +C+C
Sbjct: 621 SCVGNDSFIGLSSVRLLSLYDNQITTIAPGAFDTLHSLSTLNLLANPFNCNC 672
Score = 95 (38.5 bits), Expect = 4.3e-10, Sum P(3) = 4.3e-10
Identities = 32/111 (28%), Positives = 53/111 (47%)
Query: 51 PEVQTIILRENRISNVHY-TLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNE 109
P+++ I N+I+++ + + L+ N++ + F+ L L + N
Sbjct: 560 PQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNR 619
Query: 110 ISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLH----LELLILSFN 156
IS + D+F GL ++ L L N+I+ I AF DTLH L LL FN
Sbjct: 620 ISCVGNDSFIGLSSVRLLSLYDNQITTIAPGAF-DTLHSLSTLNLLANPFN 669
Score = 91 (37.1 bits), Expect = 1.1e-09, Sum P(3) = 1.1e-09
Identities = 38/158 (24%), Positives = 58/158 (36%)
Query: 126 TLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILD 185
T+D S K++ I + T L L + N T E + IF L LR + NN+I D
Sbjct: 518 TVDCSNQKLTKIPDHIPQYTAELRL---NNNEFTVLEATGIFKKLPQLRKINFSNNKITD 574
Query: 186 VPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTL 245
+ ++ + L N +E V F L +L TL L + L
Sbjct: 575 IEEGAFEGA--SGVNEILLTSNRLENVQHKMFK-GLESLKTLMLRSNRISCVGNDSFIGL 631
Query: 246 RTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFS 283
++ I L +L L+L N F+
Sbjct: 632 SSVRLLSLYDNQITTIAPGAFDTLHSLSTLNLLANPFN 669
Score = 85 (35.0 bits), Expect = 4.4e-09, Sum P(3) = 4.4e-09
Identities = 34/127 (26%), Positives = 50/127 (39%)
Query: 176 LKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXX 235
L L+ N I + + L H L L L EN I T+ +F L L L L
Sbjct: 60 LDLNGNNITRITKTDFAGLRH--LRVLQLMENKITTIERGAFQ-DLKELERLRLNRNHLQ 116
Query: 236 XXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFS 295
+ L+ AIP K + NL L N+ S I+ AF++L
Sbjct: 117 LFPELLFLGTSKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNHISCIEDGAFRALRD 176
Query: 296 LKLVKIN 302
L+++ +N
Sbjct: 177 LEVLTLN 183
Score = 72 (30.4 bits), Expect = 1.8e-14, Sum P(3) = 1.8e-14
Identities = 25/86 (29%), Positives = 42/86 (48%)
Query: 367 LVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSL 425
+ +I L N + I AF +L + ++ N + +L FQG +L S+ L GN +
Sbjct: 304 ITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQ-ISELAPDAFQGLRSLNSLVLYGNKI 362
Query: 426 SHLEASHFP-LERISFLDLSDNPLHC 450
+ L S F L + L L+ N ++C
Sbjct: 363 TELPKSLFEGLFSLQLLLLNANKINC 388
Score = 59 (25.8 bits), Expect = 3.9e-13, Sum P(3) = 3.9e-13
Identities = 21/87 (24%), Positives = 40/87 (45%)
Query: 337 GTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFVDNIQLETVIIN 396
G + L L GN + + F+ LFSL+L+ +N ++ + AF D L + +
Sbjct: 348 GLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNA-NKINCLRVDAFQDLHNLNLLSLY 406
Query: 397 ENMNLKQLPSKLFQGNTNLKSVSLKGN 423
+N L+ + F ++++ L N
Sbjct: 407 DN-KLQTIAKGTFSPLRAIQTMHLAQN 432
Score = 57 (25.1 bits), Expect = 8.6e-23, Sum P(4) = 8.6e-23
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 269 LSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
L +L +L L GN + + F+ LFSL+L+ +N
Sbjct: 349 LRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLN 382
Score = 57 (25.1 bits), Expect = 8.6e-23, Sum P(4) = 8.6e-23
Identities = 26/126 (20%), Positives = 51/126 (40%)
Query: 180 NNQILDVPNNVLSNLPH---QSLHYLYLNENLIETVLDNSF-PFTLTNLHTLALXXXXXX 235
+N I+D L+ +P +++ + L +N I+ + +F P+ L + L
Sbjct: 282 SNNIVDCRGKGLTEIPTNLPETITEIRLEQNSIKVIPPGAFSPYK--KLRRIDLSNNQIS 339
Query: 236 XXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFS 295
LR+L+ +P L +L L L+ N + + AF+ L +
Sbjct: 340 ELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHN 399
Query: 296 LKLVKI 301
L L+ +
Sbjct: 400 LNLLSL 405
Score = 53 (23.7 bits), Expect = 1.6e-12, Sum P(3) = 1.6e-12
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 261 IPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSL 296
+P K+LS L +DLS N S + + +F ++ L
Sbjct: 771 VP-KELSNYKHLTLIDLSNNRISTLSNQSFSNMTQL 805
Score = 53 (23.7 bits), Expect = 1.6e-12, Sum P(3) = 1.6e-12
Identities = 15/45 (33%), Positives = 21/45 (46%)
Query: 261 IPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIP 305
IP + L +L L L GN+ S + AF L +L + I P
Sbjct: 818 IPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLAALSHLAIGANP 862
Score = 51 (23.0 bits), Expect = 6.6e-14, Sum P(4) = 6.6e-14
Identities = 17/57 (29%), Positives = 28/57 (49%)
Query: 390 LETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFPLERISFLDLSDN 446
L+TV+ N LK LP + + T L L GN + + + ++ +DLS+N
Sbjct: 736 LDTVVRCSNKALKVLPKGIPRDVTELY---LDGNQFTLVPKELSNYKHLTLIDLSNN 789
Score = 46 (21.3 bits), Expect = 8.6e-23, Sum P(4) = 8.6e-23
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 496 DRIIKNNHSLTIVLNNLKCSSPPDIKG 522
D +NN + +NN C PP+ G
Sbjct: 1006 DNDCENNSTCVDGINNYTCLCPPEYTG 1032
Score = 44 (20.5 bits), Expect = 1.3e-12, Sum P(4) = 1.3e-12
Identities = 26/113 (23%), Positives = 42/113 (37%)
Query: 268 KLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQXXXXXXXXXXXXXX 326
KL L ++ S N ++I+ AF+ + +I L N L+++
Sbjct: 558 KLPQLRKINFSNNKITDIEEGAFEGASGVN--EILLTSNRLENVQHKMFKGLESLKTLML 615
Query: 327 XXXAFSLTP----LGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN 375
S +G L L N + I AF +L SL +NL+ N
Sbjct: 616 RSNRISCVGNDSFIGLSSVRLLSLYDNQITTIAPGAFDTLHSLST--LNLLAN 666
Score = 39 (18.8 bits), Expect = 4.4e-22, Sum P(4) = 4.4e-22
Identities = 9/28 (32%), Positives = 11/28 (39%)
Query: 496 DRIIKNNHSLTIVLNNLKCSSPPDIKGL 523
D KN T +N C+ P GL
Sbjct: 1084 DNKCKNGAHCTDAVNGYTCTCPEGYSGL 1111
Score = 39 (18.8 bits), Expect = 5.0e-18, Sum P(4) = 5.0e-18
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 505 LTIVL--NNLKCSSPPDIKGLE 524
LT++L N L+C P GL+
Sbjct: 806 LTLILSYNRLRCIPPRTFDGLK 827
Score = 38 (18.4 bits), Expect = 6.3e-18, Sum P(4) = 6.3e-18
Identities = 8/30 (26%), Positives = 14/30 (46%)
Query: 507 IVLNNLKCSSPPDIKGLEVKAVPENSVHCE 536
IV N +C P +K + ++ V C+
Sbjct: 686 IVTGNPRCQKPYFLKEIPIQDVAIQDFTCD 715
Score = 38 (18.4 bits), Expect = 2.7e-10, Sum P(3) = 2.7e-10
Identities = 11/38 (28%), Positives = 20/38 (52%)
Query: 470 ETTT-VAYEMTSNTSISPGTTTEAQRVDRIIKNNHSLT 506
ET T + E S I PG + +++ RI +N+ ++
Sbjct: 302 ETITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQIS 339
>RGD|69307 [details] [associations]
symbol:Slit1 "slit homolog 1 (Drosophila)" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005615
"extracellular space" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0007409 "axonogenesis" evidence=ISO]
[GO:0007411 "axon guidance" evidence=ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0008045 "motor neuron axon guidance"
evidence=IEA;ISO] [GO:0021510 "spinal cord development"
evidence=IEP] [GO:0021772 "olfactory bulb development" evidence=ISO]
[GO:0022028 "tangential migration from the subventricular zone to
the olfactory bulb" evidence=IEA;ISO] [GO:0022029 "telencephalon
cell migration" evidence=ISO] [GO:0031290 "retinal ganglion cell
axon guidance" evidence=IEA;ISO] [GO:0033563 "dorsal/ventral axon
guidance" evidence=IEA;ISO] [GO:0040023 "establishment of nucleus
localization" evidence=IEA;ISO] [GO:0043395 "heparan sulfate
proteoglycan binding" evidence=IDA] [GO:0048495 "Roundabout binding"
evidence=IEA;ISO] [GO:0048812 "neuron projection morphogenesis"
evidence=ISO] [GO:0048843 "negative regulation of axon extension
involved in axon guidance" evidence=IDA] [GO:0048846 "axon extension
involved in axon guidance" evidence=IEA;ISO] [GO:0050919 "negative
chemotaxis" evidence=IEA;ISO] [GO:0051964 "negative regulation of
synapse assembly" evidence=ISS] [GO:0021834 "chemorepulsion involved
in embryonic olfactory bulb interneuron precursor migration"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 RGD:69307 GO:GO:0005737 GO:GO:0005615
GO:GO:0007420 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0008045 PROSITE:PS01186
GO:GO:0043395 InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274
SMART:SM00282 PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 GO:GO:0048846 Pfam:PF12661 GO:GO:0033563 GO:GO:0051964
Pfam:PF01463 GO:GO:0022028 GO:GO:0050919 GO:GO:0048843 CTD:6585
HOGENOM:HOG000116120 HOVERGEN:HBG057959 KO:K06838 OrthoDB:EOG4VDPXM
EMBL:AB011530 EMBL:AF133730 EMBL:AB073213 EMBL:AB073214
EMBL:AB073215 EMBL:AB017170 IPI:IPI00389760 IPI:IPI00409983
IPI:IPI00409984 IPI:IPI00409985 PIR:T42218 RefSeq:NP_075242.1
UniGene:Rn.30002 ProteinModelPortal:O88279 SMR:O88279 STRING:O88279
PRIDE:O88279 GeneID:65047 KEGG:rno:65047 UCSC:RGD:69307
InParanoid:O88279 NextBio:613884 ArrayExpress:O88279
Genevestigator:O88279 GermOnline:ENSRNOG00000026065 Uniprot:O88279
Length = 1531
Score = 211 (79.3 bits), Expect = 1.1e-22, Sum P(4) = 1.1e-22
Identities = 54/199 (27%), Positives = 95/199 (47%)
Query: 8 IFLILALTKLNKAICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVH 67
+ L A +L CP+ C C ++ C GL+ +P + + + L N I+ +H
Sbjct: 20 LLLWAAAWRLGATACPALCTCTGTTVD--CHGTGLQAIPKNIPRNTERLELNGNNITRIH 77
Query: 68 YT-LSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKT 126
+ +LR L L N+I + F+ +L L ++ N++ L + F+ + L
Sbjct: 78 KNDFAGLKQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLQVLPELLFQNNQALSR 137
Query: 127 LDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDV 186
LDLS N + + + AFR L+ L L N I+ E+ F +L+ L +L L+NN I +
Sbjct: 138 LDLSENSLQAVPRKAFRGATDLKNLQLDKNQISCIEEGA-FRALRGLEVLTLNNNNITTI 196
Query: 187 PNNVLSNLPHQSLHYLYLN 205
P + +++P L+ N
Sbjct: 197 PVSSFNHMPKLRTFRLHSN 215
Score = 184 (69.8 bits), Expect = 1.1e-19, Sum P(4) = 1.1e-19
Identities = 57/170 (33%), Positives = 86/170 (50%)
Query: 17 LNKAICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRE-NRISNVHY-TLSFYI 74
L+ CP+ C C + ++ C GL +P L PE T I E N I ++ S Y
Sbjct: 277 LSSGSCPAMCSCSNGIVD--CRGKGLTAIPANL-PETMTEIRLELNGIKSIPPGAFSPYR 333
Query: 75 ELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKI 134
+LR +DLS N+I + F+ L +L + N+I+ L + F GL L+ L L+ NKI
Sbjct: 334 KLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLNANKI 393
Query: 135 SVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQIL 184
+ I AF+D +L LL L N I F+SL++++ L L N +
Sbjct: 394 NCIRPDAFQDLQNLSLLSLYDNKIQSLAKGT-FTSLRAIQTLHLAQNPFI 442
Score = 170 (64.9 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 41/135 (30%), Positives = 68/135 (50%)
Query: 22 CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSFYIELRSLDL 81
CP C C D + C++ L+ +P + V + L N+ + V LS + L+ +DL
Sbjct: 734 CPQECACLDTVVR--CSNKHLQALPKGIPKNVTELYLDGNQFTLVPGQLSTFKYLQLVDL 791
Query: 82 SVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTA 141
S NKI+ L + +F ++L L +SYN + + F+GL+ L+ L L N +S + +
Sbjct: 792 SNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLHGNDVSTLQEGI 851
Query: 142 FRDTLHLELLILSFN 156
F D L L + N
Sbjct: 852 FADVTSLSHLAIGAN 866
Score = 169 (64.5 bits), Expect = 3.4e-17, Sum P(3) = 3.4e-17
Identities = 46/159 (28%), Positives = 80/159 (50%)
Query: 22 CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSF--YIELRSL 79
CP +C+C +E C+ L +P ++ + L N IS + T F L+ +
Sbjct: 513 CPHKCRCEASVVE--CSGLKLSKIPERIPQSTTELRLNNNEISILEATGLFKKLSHLKKI 570
Query: 80 DLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINK 139
+LS NK++ + FE + L+++ N++ ++ F+GL L+TL L N+IS I+
Sbjct: 571 NLSNNKVSEIEDGTFEGATSVSELHLTANQLESVRSGMFRGLDGLRTLMLRNNRISCIHN 630
Query: 140 TAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKL 178
+F ++ LL L N+IT F +L++L L L
Sbjct: 631 DSFTGLRNVRLLSLYDNHITTISPGA-FDTLQALSTLNL 668
Score = 164 (62.8 bits), Expect = 1.8e-17, Sum P(4) = 1.8e-17
Identities = 45/133 (33%), Positives = 70/133 (52%)
Query: 52 EVQTIILRENRISNVHY-TLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEI 110
+++ + L EN+I V EL L L+ N++ VL F+ L L++S N +
Sbjct: 86 QLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLQVLPELLFQNNQALSRLDLSENSL 145
Query: 111 SALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSL 170
A+ + F+G +LK L L N+IS I + AFR LE+L L+ NNIT S F+ +
Sbjct: 146 QAVPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNITTIPVSS-FNHM 204
Query: 171 KSLRILKLDNNQI 183
LR +L +N +
Sbjct: 205 PKLRTFRLHSNHL 217
Score = 140 (54.3 bits), Expect = 7.2e-15, Sum P(4) = 7.2e-15
Identities = 45/151 (29%), Positives = 74/151 (49%)
Query: 79 LDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVIN 138
L+L+ N I + ++F +L L + N+I A+ + F +KEL+ L L+ N++ V+
Sbjct: 66 LELNGNNITRIHKNDFAGLKQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLQVLP 125
Query: 139 KTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQS 198
+ F++ L L LS N++ + F L+ L+LD NQI + L +
Sbjct: 126 ELLFQNNQALSRLDLSENSLQAVP-RKAFRGATDLKNLQLDKNQISCIEEGAFRAL--RG 182
Query: 199 LHYLYLNENLIETVLDNSFPFTLTNLHTLAL 229
L L LN N I T+ +SF + L T L
Sbjct: 183 LEVLTLNNNNITTIPVSSFNH-MPKLRTFRL 212
Score = 133 (51.9 bits), Expect = 1.1e-22, Sum P(4) = 1.1e-22
Identities = 41/122 (33%), Positives = 65/122 (53%)
Query: 335 PLGTLK-CDRLDLSGNNFSNIDSVAFKSLFS-LKLVKINLIPNLDSIDQRAFVDNIQLET 392
P G K L L GN F+ + S F L+LV ++ + S+ +F + QL T
Sbjct: 756 PKGIPKNVTELYLDGNQFTLVPGQL--STFKYLQLVDLSN-NKISSLSNSSFTNMSQLTT 812
Query: 393 VIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPLHCD 451
+I++ N L+ +P FQG +L+ +SL GN +S L+ F + +S L + NPL+CD
Sbjct: 813 LILSYNA-LQCIPPLAFQGLRSLRLLSLHGNDVSTLQEGIFADVTSLSHLAIGANPLYCD 871
Query: 452 CN 453
C+
Sbjct: 872 CH 873
Score = 116 (45.9 bits), Expect = 4.5e-20, Sum P(3) = 4.5e-20
Identities = 37/116 (31%), Positives = 53/116 (45%)
Query: 340 KCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINEN 398
K R+DLS N + I AF+ L SL + L N + + + F L+ +++N N
Sbjct: 334 KLRRIDLSNNQIAEIAPDAFQGLRSLN--SLVLYGNKITDLPRGVFGGLYTLQLLLLNAN 391
Query: 399 MNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPLHCDCN 453
+ + FQ NL +SL N + L F L I L L+ NP CDCN
Sbjct: 392 -KINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQNPFICDCN 446
Score = 103 (41.3 bits), Expect = 1.5e-19, Sum P(4) = 1.5e-19
Identities = 30/112 (26%), Positives = 58/112 (51%)
Query: 343 RLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNL 401
+++LS N S I+ F+ S+ +++L N L+S+ F L T+++ N +
Sbjct: 569 KINLSNNKVSEIEDGTFEGATSVS--ELHLTANQLESVRSGMFRGLDGLRTLMLRNN-RI 625
Query: 402 KQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPLHCDC 452
+ + F G N++ +SL N ++ + F L+ +S L+L NP +C+C
Sbjct: 626 SCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDTLQALSTLNLLANPFNCNC 677
Score = 103 (41.3 bits), Expect = 3.0e-10, Sum P(3) = 3.0e-10
Identities = 34/109 (31%), Positives = 53/109 (48%)
Query: 53 VQTIILRENRISNVHY-TLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEIS 111
++ I L N++S + T + L L+ N++ + S F + L L + N IS
Sbjct: 567 LKKINLSNNKVSEIEDGTFEGATSVSELHLTANQLESVRSGMFRGLDGLRTLMLRNNRIS 626
Query: 112 ALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLH----LELLILSFN 156
+ D+F GL+ ++ L L N I+ I+ AF DTL L LL FN
Sbjct: 627 CIHNDSFTGLRNVRLLSLYDNHITTISPGAF-DTLQALSTLNLLANPFN 674
Score = 102 (41.0 bits), Expect = 5.0e-11, Sum P(4) = 5.0e-11
Identities = 43/133 (32%), Positives = 55/133 (41%)
Query: 121 LKELKT-LDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLD 179
L E T + L N I I AF L + LS N I + F L+SL L L
Sbjct: 307 LPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAP-DAFQGLRSLNSLVLY 365
Query: 180 NNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXX 239
N+I D+P V L +L L LN N I + ++F L NL L+L
Sbjct: 366 GNKITDLPRGVFGGL--YTLQLLLLNANKINCIRPDAFQ-DLQNLSLLSLYDNKIQSLAK 422
Query: 240 XXXVTLR---TLH 249
+LR TLH
Sbjct: 423 GTFTSLRAIQTLH 435
Score = 96 (38.9 bits), Expect = 1.5e-09, Sum P(3) = 1.5e-09
Identities = 39/161 (24%), Positives = 62/161 (38%)
Query: 123 ELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQ 182
E ++ S K+S I + + T L L + N I+ E + +F L L+ + L NN+
Sbjct: 520 EASVVECSGLKLSKIPERIPQSTTELRL---NNNEISILEATGLFKKLSHLKKINLSNNK 576
Query: 183 ILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXX 242
+ ++ + S+ L+L N +E+V F L L TL L
Sbjct: 577 VSEIEDGTFEGAT--SVSELHLTANQLESVRSGMFR-GLDGLRTLMLRNNRISCIHNDSF 633
Query: 243 VTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFS 283
LR + I L AL L+L N F+
Sbjct: 634 TGLRNVRLLSLYDNHITTISPGAFDTLQALSTLNLLANPFN 674
Score = 82 (33.9 bits), Expect = 3.8e-08, Sum P(3) = 3.8e-08
Identities = 33/127 (25%), Positives = 50/127 (39%)
Query: 176 LKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXX 235
L+L+ N I + N + L + L L L EN I V +F + L L L
Sbjct: 66 LELNGNNITRIHKNDFAGL--KQLRVLQLMENQIGAVERGAFD-DMKELERLRLNRNQLQ 122
Query: 236 XXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFS 295
+ L A+P K + L NL L N S I+ AF++L
Sbjct: 123 VLPELLFQNNQALSRLDLSENSLQAVPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRG 182
Query: 296 LKLVKIN 302
L+++ +N
Sbjct: 183 LEVLTLN 189
Score = 58 (25.5 bits), Expect = 3.4e-11, Sum P(3) = 3.4e-11
Identities = 18/62 (29%), Positives = 34/62 (54%)
Query: 168 SSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTL 227
S+ K L+++ L NN+I + N+ +N+ L L L+ N ++ + +F L +L L
Sbjct: 781 STFKYLQLVDLSNNKISSLSNSSFTNM--SQLTTLILSYNALQCIPPLAFQ-GLRSLRLL 837
Query: 228 AL 229
+L
Sbjct: 838 SL 839
Score = 55 (24.4 bits), Expect = 1.0e-14, Sum P(4) = 1.0e-14
Identities = 20/87 (22%), Positives = 40/87 (45%)
Query: 337 GTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFVDNIQLETVIIN 396
G + L L GN +++ F L++L+L+ +N ++ I AF D L + +
Sbjct: 355 GLRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLNA-NKINCIRPDAFQDLQNLSLLSLY 413
Query: 397 ENMNLKQLPSKLFQGNTNLKSVSLKGN 423
+N ++ L F ++++ L N
Sbjct: 414 DN-KIQSLAKGTFTSLRAIQTLHLAQN 439
Score = 53 (23.7 bits), Expect = 1.3e-14, Sum P(4) = 1.3e-14
Identities = 15/59 (25%), Positives = 30/59 (50%)
Query: 390 LETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFPLERISFLDLSDNPL 448
L+TV+ N +L+ LP + + N+ + L GN + + + + +DLS+N +
Sbjct: 741 LDTVVRCSNKHLQALPKGIPK---NVTELYLDGNQFTLVPGQLSTFKYLQLVDLSNNKI 796
Score = 53 (23.7 bits), Expect = 1.3e-13, Sum P(3) = 1.3e-13
Identities = 15/59 (25%), Positives = 26/59 (44%)
Query: 244 TLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
T + L ++ + +S L L LS N I +AF+ L SL+L+ ++
Sbjct: 782 TFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLH 840
Score = 51 (23.0 bits), Expect = 1.1e-22, Sum P(4) = 1.1e-22
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 263 TKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSI 310
T KLS L ++LS N S I+ F+ S+ +++L N L+S+
Sbjct: 558 TGLFKKLSHLKKINLSNNKVSEIEDGTFEGATSVS--ELHLTANQLESV 604
Score = 51 (23.0 bits), Expect = 2.6e-14, Sum P(4) = 2.6e-14
Identities = 14/42 (33%), Positives = 23/42 (54%)
Query: 408 LFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPL 448
LF+ ++LK ++L N +S +E F +S L L+ N L
Sbjct: 560 LFKKLSHLKKINLSNNKVSEIEDGTFEGATSVSELHLTANQL 601
Score = 50 (22.7 bits), Expect = 1.4e-22, Sum P(4) = 1.4e-22
Identities = 14/37 (37%), Positives = 18/37 (48%)
Query: 260 AIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSL 296
+IP S L +DLS N + I AF+ L SL
Sbjct: 323 SIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSL 359
Score = 48 (22.0 bits), Expect = 2.2e-22, Sum P(4) = 2.2e-22
Identities = 11/34 (32%), Positives = 21/34 (61%)
Query: 269 LSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
L +L +L L GN +++ F L++L+L+ +N
Sbjct: 356 LRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLN 389
Score = 48 (22.0 bits), Expect = 5.5e-13, Sum P(2) = 5.5e-13
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 513 KCSSPPDIKGLEVKAVPENSVHC 535
+CS P ++GL V V ++ C
Sbjct: 241 QCSGPASLRGLNVAEVQKSEFSC 263
Score = 47 (21.6 bits), Expect = 5.1e-13, Sum P(3) = 5.1e-13
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 265 QLSKLSALVNLDLSGNNFSNIDSVAFKSLFSL 296
QLS L +DLS N S++ + +F ++ L
Sbjct: 779 QLSTFKYLQLVDLSNNKISSLSNSSFTNMSQL 810
Score = 46 (21.3 bits), Expect = 1.1e-22, Sum P(4) = 1.1e-22
Identities = 6/24 (25%), Positives = 13/24 (54%)
Query: 513 KCSSPPDIKGLEVKAVPENSVHCE 536
+C+ PP+++G + P C+
Sbjct: 892 RCAGPPEMEGKLLLTTPAKKFECQ 915
Score = 41 (19.5 bits), Expect = 2.1e-12, Sum P(3) = 2.1e-12
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 470 ETTT-VAYEMTSNTSISPGTTTEAQRVDRI-IKNN 502
ET T + E+ SI PG + +++ RI + NN
Sbjct: 309 ETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNN 343
>UNIPROTKB|O88279 [details] [associations]
symbol:Slit1 "Slit homolog 1 protein" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 RGD:69307 GO:GO:0005737 GO:GO:0005615
GO:GO:0007420 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0008045 PROSITE:PS01186
GO:GO:0043395 InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274
SMART:SM00282 PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 GO:GO:0048846 Pfam:PF12661 GO:GO:0033563 GO:GO:0051964
Pfam:PF01463 GO:GO:0022028 GO:GO:0050919 GO:GO:0048843 CTD:6585
HOGENOM:HOG000116120 HOVERGEN:HBG057959 KO:K06838 OrthoDB:EOG4VDPXM
EMBL:AB011530 EMBL:AF133730 EMBL:AB073213 EMBL:AB073214
EMBL:AB073215 EMBL:AB017170 IPI:IPI00389760 IPI:IPI00409983
IPI:IPI00409984 IPI:IPI00409985 PIR:T42218 RefSeq:NP_075242.1
UniGene:Rn.30002 ProteinModelPortal:O88279 SMR:O88279 STRING:O88279
PRIDE:O88279 GeneID:65047 KEGG:rno:65047 UCSC:RGD:69307
InParanoid:O88279 NextBio:613884 ArrayExpress:O88279
Genevestigator:O88279 GermOnline:ENSRNOG00000026065 Uniprot:O88279
Length = 1531
Score = 211 (79.3 bits), Expect = 1.1e-22, Sum P(4) = 1.1e-22
Identities = 54/199 (27%), Positives = 95/199 (47%)
Query: 8 IFLILALTKLNKAICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVH 67
+ L A +L CP+ C C ++ C GL+ +P + + + L N I+ +H
Sbjct: 20 LLLWAAAWRLGATACPALCTCTGTTVD--CHGTGLQAIPKNIPRNTERLELNGNNITRIH 77
Query: 68 YT-LSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKT 126
+ +LR L L N+I + F+ +L L ++ N++ L + F+ + L
Sbjct: 78 KNDFAGLKQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLQVLPELLFQNNQALSR 137
Query: 127 LDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDV 186
LDLS N + + + AFR L+ L L N I+ E+ F +L+ L +L L+NN I +
Sbjct: 138 LDLSENSLQAVPRKAFRGATDLKNLQLDKNQISCIEEGA-FRALRGLEVLTLNNNNITTI 196
Query: 187 PNNVLSNLPHQSLHYLYLN 205
P + +++P L+ N
Sbjct: 197 PVSSFNHMPKLRTFRLHSN 215
Score = 184 (69.8 bits), Expect = 1.1e-19, Sum P(4) = 1.1e-19
Identities = 57/170 (33%), Positives = 86/170 (50%)
Query: 17 LNKAICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRE-NRISNVHY-TLSFYI 74
L+ CP+ C C + ++ C GL +P L PE T I E N I ++ S Y
Sbjct: 277 LSSGSCPAMCSCSNGIVD--CRGKGLTAIPANL-PETMTEIRLELNGIKSIPPGAFSPYR 333
Query: 75 ELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKI 134
+LR +DLS N+I + F+ L +L + N+I+ L + F GL L+ L L+ NKI
Sbjct: 334 KLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLNANKI 393
Query: 135 SVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQIL 184
+ I AF+D +L LL L N I F+SL++++ L L N +
Sbjct: 394 NCIRPDAFQDLQNLSLLSLYDNKIQSLAKGT-FTSLRAIQTLHLAQNPFI 442
Score = 170 (64.9 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 41/135 (30%), Positives = 68/135 (50%)
Query: 22 CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSFYIELRSLDL 81
CP C C D + C++ L+ +P + V + L N+ + V LS + L+ +DL
Sbjct: 734 CPQECACLDTVVR--CSNKHLQALPKGIPKNVTELYLDGNQFTLVPGQLSTFKYLQLVDL 791
Query: 82 SVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTA 141
S NKI+ L + +F ++L L +SYN + + F+GL+ L+ L L N +S + +
Sbjct: 792 SNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLHGNDVSTLQEGI 851
Query: 142 FRDTLHLELLILSFN 156
F D L L + N
Sbjct: 852 FADVTSLSHLAIGAN 866
Score = 169 (64.5 bits), Expect = 3.4e-17, Sum P(3) = 3.4e-17
Identities = 46/159 (28%), Positives = 80/159 (50%)
Query: 22 CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSF--YIELRSL 79
CP +C+C +E C+ L +P ++ + L N IS + T F L+ +
Sbjct: 513 CPHKCRCEASVVE--CSGLKLSKIPERIPQSTTELRLNNNEISILEATGLFKKLSHLKKI 570
Query: 80 DLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINK 139
+LS NK++ + FE + L+++ N++ ++ F+GL L+TL L N+IS I+
Sbjct: 571 NLSNNKVSEIEDGTFEGATSVSELHLTANQLESVRSGMFRGLDGLRTLMLRNNRISCIHN 630
Query: 140 TAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKL 178
+F ++ LL L N+IT F +L++L L L
Sbjct: 631 DSFTGLRNVRLLSLYDNHITTISPGA-FDTLQALSTLNL 668
Score = 164 (62.8 bits), Expect = 1.8e-17, Sum P(4) = 1.8e-17
Identities = 45/133 (33%), Positives = 70/133 (52%)
Query: 52 EVQTIILRENRISNVHY-TLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEI 110
+++ + L EN+I V EL L L+ N++ VL F+ L L++S N +
Sbjct: 86 QLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLQVLPELLFQNNQALSRLDLSENSL 145
Query: 111 SALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSL 170
A+ + F+G +LK L L N+IS I + AFR LE+L L+ NNIT S F+ +
Sbjct: 146 QAVPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNITTIPVSS-FNHM 204
Query: 171 KSLRILKLDNNQI 183
LR +L +N +
Sbjct: 205 PKLRTFRLHSNHL 217
Score = 140 (54.3 bits), Expect = 7.2e-15, Sum P(4) = 7.2e-15
Identities = 45/151 (29%), Positives = 74/151 (49%)
Query: 79 LDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVIN 138
L+L+ N I + ++F +L L + N+I A+ + F +KEL+ L L+ N++ V+
Sbjct: 66 LELNGNNITRIHKNDFAGLKQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLQVLP 125
Query: 139 KTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQS 198
+ F++ L L LS N++ + F L+ L+LD NQI + L +
Sbjct: 126 ELLFQNNQALSRLDLSENSLQAVP-RKAFRGATDLKNLQLDKNQISCIEEGAFRAL--RG 182
Query: 199 LHYLYLNENLIETVLDNSFPFTLTNLHTLAL 229
L L LN N I T+ +SF + L T L
Sbjct: 183 LEVLTLNNNNITTIPVSSFNH-MPKLRTFRL 212
Score = 133 (51.9 bits), Expect = 1.1e-22, Sum P(4) = 1.1e-22
Identities = 41/122 (33%), Positives = 65/122 (53%)
Query: 335 PLGTLK-CDRLDLSGNNFSNIDSVAFKSLFS-LKLVKINLIPNLDSIDQRAFVDNIQLET 392
P G K L L GN F+ + S F L+LV ++ + S+ +F + QL T
Sbjct: 756 PKGIPKNVTELYLDGNQFTLVPGQL--STFKYLQLVDLSN-NKISSLSNSSFTNMSQLTT 812
Query: 393 VIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPLHCD 451
+I++ N L+ +P FQG +L+ +SL GN +S L+ F + +S L + NPL+CD
Sbjct: 813 LILSYNA-LQCIPPLAFQGLRSLRLLSLHGNDVSTLQEGIFADVTSLSHLAIGANPLYCD 871
Query: 452 CN 453
C+
Sbjct: 872 CH 873
Score = 116 (45.9 bits), Expect = 4.5e-20, Sum P(3) = 4.5e-20
Identities = 37/116 (31%), Positives = 53/116 (45%)
Query: 340 KCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINEN 398
K R+DLS N + I AF+ L SL + L N + + + F L+ +++N N
Sbjct: 334 KLRRIDLSNNQIAEIAPDAFQGLRSLN--SLVLYGNKITDLPRGVFGGLYTLQLLLLNAN 391
Query: 399 MNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPLHCDCN 453
+ + FQ NL +SL N + L F L I L L+ NP CDCN
Sbjct: 392 -KINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQNPFICDCN 446
Score = 103 (41.3 bits), Expect = 1.5e-19, Sum P(4) = 1.5e-19
Identities = 30/112 (26%), Positives = 58/112 (51%)
Query: 343 RLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNL 401
+++LS N S I+ F+ S+ +++L N L+S+ F L T+++ N +
Sbjct: 569 KINLSNNKVSEIEDGTFEGATSVS--ELHLTANQLESVRSGMFRGLDGLRTLMLRNN-RI 625
Query: 402 KQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPLHCDC 452
+ + F G N++ +SL N ++ + F L+ +S L+L NP +C+C
Sbjct: 626 SCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDTLQALSTLNLLANPFNCNC 677
Score = 103 (41.3 bits), Expect = 3.0e-10, Sum P(3) = 3.0e-10
Identities = 34/109 (31%), Positives = 53/109 (48%)
Query: 53 VQTIILRENRISNVHY-TLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEIS 111
++ I L N++S + T + L L+ N++ + S F + L L + N IS
Sbjct: 567 LKKINLSNNKVSEIEDGTFEGATSVSELHLTANQLESVRSGMFRGLDGLRTLMLRNNRIS 626
Query: 112 ALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLH----LELLILSFN 156
+ D+F GL+ ++ L L N I+ I+ AF DTL L LL FN
Sbjct: 627 CIHNDSFTGLRNVRLLSLYDNHITTISPGAF-DTLQALSTLNLLANPFN 674
Score = 102 (41.0 bits), Expect = 5.0e-11, Sum P(4) = 5.0e-11
Identities = 43/133 (32%), Positives = 55/133 (41%)
Query: 121 LKELKT-LDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLD 179
L E T + L N I I AF L + LS N I + F L+SL L L
Sbjct: 307 LPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAP-DAFQGLRSLNSLVLY 365
Query: 180 NNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXX 239
N+I D+P V L +L L LN N I + ++F L NL L+L
Sbjct: 366 GNKITDLPRGVFGGL--YTLQLLLLNANKINCIRPDAFQ-DLQNLSLLSLYDNKIQSLAK 422
Query: 240 XXXVTLR---TLH 249
+LR TLH
Sbjct: 423 GTFTSLRAIQTLH 435
Score = 96 (38.9 bits), Expect = 1.5e-09, Sum P(3) = 1.5e-09
Identities = 39/161 (24%), Positives = 62/161 (38%)
Query: 123 ELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQ 182
E ++ S K+S I + + T L L + N I+ E + +F L L+ + L NN+
Sbjct: 520 EASVVECSGLKLSKIPERIPQSTTELRL---NNNEISILEATGLFKKLSHLKKINLSNNK 576
Query: 183 ILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXX 242
+ ++ + S+ L+L N +E+V F L L TL L
Sbjct: 577 VSEIEDGTFEGAT--SVSELHLTANQLESVRSGMFR-GLDGLRTLMLRNNRISCIHNDSF 633
Query: 243 VTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFS 283
LR + I L AL L+L N F+
Sbjct: 634 TGLRNVRLLSLYDNHITTISPGAFDTLQALSTLNLLANPFN 674
Score = 82 (33.9 bits), Expect = 3.8e-08, Sum P(3) = 3.8e-08
Identities = 33/127 (25%), Positives = 50/127 (39%)
Query: 176 LKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXX 235
L+L+ N I + N + L + L L L EN I V +F + L L L
Sbjct: 66 LELNGNNITRIHKNDFAGL--KQLRVLQLMENQIGAVERGAFD-DMKELERLRLNRNQLQ 122
Query: 236 XXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFS 295
+ L A+P K + L NL L N S I+ AF++L
Sbjct: 123 VLPELLFQNNQALSRLDLSENSLQAVPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRG 182
Query: 296 LKLVKIN 302
L+++ +N
Sbjct: 183 LEVLTLN 189
Score = 58 (25.5 bits), Expect = 3.4e-11, Sum P(3) = 3.4e-11
Identities = 18/62 (29%), Positives = 34/62 (54%)
Query: 168 SSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTL 227
S+ K L+++ L NN+I + N+ +N+ L L L+ N ++ + +F L +L L
Sbjct: 781 STFKYLQLVDLSNNKISSLSNSSFTNM--SQLTTLILSYNALQCIPPLAFQ-GLRSLRLL 837
Query: 228 AL 229
+L
Sbjct: 838 SL 839
Score = 55 (24.4 bits), Expect = 1.0e-14, Sum P(4) = 1.0e-14
Identities = 20/87 (22%), Positives = 40/87 (45%)
Query: 337 GTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFVDNIQLETVIIN 396
G + L L GN +++ F L++L+L+ +N ++ I AF D L + +
Sbjct: 355 GLRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLNA-NKINCIRPDAFQDLQNLSLLSLY 413
Query: 397 ENMNLKQLPSKLFQGNTNLKSVSLKGN 423
+N ++ L F ++++ L N
Sbjct: 414 DN-KIQSLAKGTFTSLRAIQTLHLAQN 439
Score = 53 (23.7 bits), Expect = 1.3e-14, Sum P(4) = 1.3e-14
Identities = 15/59 (25%), Positives = 30/59 (50%)
Query: 390 LETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFPLERISFLDLSDNPL 448
L+TV+ N +L+ LP + + N+ + L GN + + + + +DLS+N +
Sbjct: 741 LDTVVRCSNKHLQALPKGIPK---NVTELYLDGNQFTLVPGQLSTFKYLQLVDLSNNKI 796
Score = 53 (23.7 bits), Expect = 1.3e-13, Sum P(3) = 1.3e-13
Identities = 15/59 (25%), Positives = 26/59 (44%)
Query: 244 TLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
T + L ++ + +S L L LS N I +AF+ L SL+L+ ++
Sbjct: 782 TFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLH 840
Score = 51 (23.0 bits), Expect = 1.1e-22, Sum P(4) = 1.1e-22
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 263 TKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSI 310
T KLS L ++LS N S I+ F+ S+ +++L N L+S+
Sbjct: 558 TGLFKKLSHLKKINLSNNKVSEIEDGTFEGATSVS--ELHLTANQLESV 604
Score = 51 (23.0 bits), Expect = 2.6e-14, Sum P(4) = 2.6e-14
Identities = 14/42 (33%), Positives = 23/42 (54%)
Query: 408 LFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPL 448
LF+ ++LK ++L N +S +E F +S L L+ N L
Sbjct: 560 LFKKLSHLKKINLSNNKVSEIEDGTFEGATSVSELHLTANQL 601
Score = 50 (22.7 bits), Expect = 1.4e-22, Sum P(4) = 1.4e-22
Identities = 14/37 (37%), Positives = 18/37 (48%)
Query: 260 AIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSL 296
+IP S L +DLS N + I AF+ L SL
Sbjct: 323 SIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSL 359
Score = 48 (22.0 bits), Expect = 2.2e-22, Sum P(4) = 2.2e-22
Identities = 11/34 (32%), Positives = 21/34 (61%)
Query: 269 LSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
L +L +L L GN +++ F L++L+L+ +N
Sbjct: 356 LRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLN 389
Score = 48 (22.0 bits), Expect = 5.5e-13, Sum P(2) = 5.5e-13
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 513 KCSSPPDIKGLEVKAVPENSVHC 535
+CS P ++GL V V ++ C
Sbjct: 241 QCSGPASLRGLNVAEVQKSEFSC 263
Score = 47 (21.6 bits), Expect = 5.1e-13, Sum P(3) = 5.1e-13
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 265 QLSKLSALVNLDLSGNNFSNIDSVAFKSLFSL 296
QLS L +DLS N S++ + +F ++ L
Sbjct: 779 QLSTFKYLQLVDLSNNKISSLSNSSFTNMSQL 810
Score = 46 (21.3 bits), Expect = 1.1e-22, Sum P(4) = 1.1e-22
Identities = 6/24 (25%), Positives = 13/24 (54%)
Query: 513 KCSSPPDIKGLEVKAVPENSVHCE 536
+C+ PP+++G + P C+
Sbjct: 892 RCAGPPEMEGKLLLTTPAKKFECQ 915
Score = 41 (19.5 bits), Expect = 2.1e-12, Sum P(3) = 2.1e-12
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 470 ETTT-VAYEMTSNTSISPGTTTEAQRVDRI-IKNN 502
ET T + E+ SI PG + +++ RI + NN
Sbjct: 309 ETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNN 343
>MGI|MGI:1315203 [details] [associations]
symbol:Slit1 "slit homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0005102 "receptor binding" evidence=TAS]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005615 "extracellular
space" evidence=ISO;IDA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IMP;IDA]
[GO:0007411 "axon guidance" evidence=ISO;IGI;IDA] [GO:0008045
"motor neuron axon guidance" evidence=ISO] [GO:0021772 "olfactory
bulb development" evidence=IGI] [GO:0022028 "tangential migration
from the subventricular zone to the olfactory bulb" evidence=IMP]
[GO:0022029 "telencephalon cell migration" evidence=IGI]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0031290
"retinal ganglion cell axon guidance" evidence=IGI;IMP] [GO:0033563
"dorsal/ventral axon guidance" evidence=IGI] [GO:0040023
"establishment of nucleus localization" evidence=IDA] [GO:0043395
"heparan sulfate proteoglycan binding" evidence=ISO] [GO:0048495
"Roundabout binding" evidence=ISO;IPI] [GO:0048812 "neuron
projection morphogenesis" evidence=IGI] [GO:0048843 "negative
regulation of axon extension involved in axon guidance"
evidence=ISO] [GO:0048846 "axon extension involved in axon
guidance" evidence=ISO] [GO:0050919 "negative chemotaxis"
evidence=ISO;IMP] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 MGI:MGI:1315203
GO:GO:0005737 GO:GO:0005615 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005102
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0008045 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS50025
GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0040023 GO:GO:0031290 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
Pfam:PF12661 GO:GO:0033563 GO:GO:0051964 Pfam:PF01463
GeneTree:ENSGT00700000104083 GO:GO:0022028 GO:GO:0050919
GO:GO:0048843 CTD:6585 HOGENOM:HOG000116120 HOVERGEN:HBG057959
KO:K06838 OrthoDB:EOG4VDPXM EMBL:AF144627 EMBL:AK122376
EMBL:BC057131 EMBL:BC062091 IPI:IPI00330211 RefSeq:NP_056563.2
UniGene:Mm.40322 ProteinModelPortal:Q80TR4 SMR:Q80TR4 STRING:Q80TR4
PhosphoSite:Q80TR4 PRIDE:Q80TR4 Ensembl:ENSMUST00000025993
GeneID:20562 KEGG:mmu:20562 UCSC:uc008hmf.2 InParanoid:Q80TR4
OMA:KCVHGKC NextBio:298853 Bgee:Q80TR4 CleanEx:MM_SLIT1
Genevestigator:Q80TR4 GermOnline:ENSMUSG00000025020 Uniprot:Q80TR4
Length = 1531
Score = 208 (78.3 bits), Expect = 2.4e-22, Sum P(4) = 2.4e-22
Identities = 54/199 (27%), Positives = 95/199 (47%)
Query: 8 IFLILALTKLNKAICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVH 67
+ L A +L CP+ C C ++ C GL+ +P + + + L N I+ +H
Sbjct: 20 LLLWAAAWRLGATACPALCTCTGTTVD--CHGTGLQAIPKNIPRNTERLELNGNNITRIH 77
Query: 68 YT-LSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKT 126
+ +LR L L N+I + F+ +L L ++ N++ L + F+ + L
Sbjct: 78 KNDFAGLKQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLQVLPELLFQNNQALSR 137
Query: 127 LDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDV 186
LDLS N + + + AFR L+ L L N I+ E+ F +L+ L +L L+NN I +
Sbjct: 138 LDLSENFLQAVPRKAFRGATDLKNLQLDKNRISCIEEGA-FRALRGLEVLTLNNNNITTI 196
Query: 187 PNNVLSNLPHQSLHYLYLN 205
P + +++P L+ N
Sbjct: 197 PVSSFNHMPKLRTFRLHSN 215
Score = 183 (69.5 bits), Expect = 1.4e-19, Sum P(4) = 1.4e-19
Identities = 57/170 (33%), Positives = 85/170 (50%)
Query: 17 LNKAICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRE-NRISNVHY-TLSFYI 74
L+ CP+ C C ++ C GL +P L PE T I E N I ++ S Y
Sbjct: 277 LSSGSCPAMCSCSSGIVD--CRGKGLTAIPANL-PETMTEIRLELNGIKSIPPGAFSPYR 333
Query: 75 ELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKI 134
+LR +DLS N+I + F+ L +L + N+I+ L + F GL L+ L L+ NKI
Sbjct: 334 KLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLNANKI 393
Query: 135 SVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQIL 184
+ I AF+D +L LL L N I F+SL++++ L L N +
Sbjct: 394 NCIRPDAFQDLQNLSLLSLYDNKIQSLAKGT-FTSLRAIQTLHLAQNPFI 442
Score = 170 (64.9 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 41/135 (30%), Positives = 68/135 (50%)
Query: 22 CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSFYIELRSLDL 81
CP C C D + C++ L+ +P + V + L N+ + V LS + L+ +DL
Sbjct: 734 CPQECACLDTVVR--CSNKHLQALPKGIPKNVTELYLDGNQFTLVPGQLSTFKYLQLVDL 791
Query: 82 SVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTA 141
S NKI+ L + +F ++L L +SYN + + F+GL+ L+ L L N +S + +
Sbjct: 792 SNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLHGNDVSTLQEGI 851
Query: 142 FRDTLHLELLILSFN 156
F D L L + N
Sbjct: 852 FADVTSLSHLAIGAN 866
Score = 169 (64.5 bits), Expect = 4.3e-17, Sum P(3) = 4.3e-17
Identities = 46/159 (28%), Positives = 80/159 (50%)
Query: 22 CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSF--YIELRSL 79
CP +C+C +E C+ L +P ++ + L N IS + T F L+ +
Sbjct: 513 CPHKCRCEASVVE--CSSLKLSKIPERIPQSTTELRLNNNEISILEATGLFKKLSHLKKI 570
Query: 80 DLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINK 139
+LS NK++ + FE + L+++ N++ ++ F+GL L+TL L N+IS I+
Sbjct: 571 NLSNNKVSEIEDGTFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIHN 630
Query: 140 TAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKL 178
+F ++ LL L N+IT F +L++L L L
Sbjct: 631 DSFTGLRNVRLLSLYDNHITTISPGA-FDTLQALSTLNL 668
Score = 162 (62.1 bits), Expect = 2.9e-17, Sum P(4) = 2.9e-17
Identities = 45/133 (33%), Positives = 70/133 (52%)
Query: 52 EVQTIILRENRISNVHY-TLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEI 110
+++ + L EN+I V EL L L+ N++ VL F+ L L++S N +
Sbjct: 86 QLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLQVLPELLFQNNQALSRLDLSENFL 145
Query: 111 SALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSL 170
A+ + F+G +LK L L N+IS I + AFR LE+L L+ NNIT S F+ +
Sbjct: 146 QAVPRKAFRGATDLKNLQLDKNRISCIEEGAFRALRGLEVLTLNNNNITTIPVSS-FNHM 204
Query: 171 KSLRILKLDNNQI 183
LR +L +N +
Sbjct: 205 PKLRTFRLHSNHL 217
Score = 134 (52.2 bits), Expect = 3.2e-14, Sum P(4) = 3.2e-14
Identities = 44/151 (29%), Positives = 72/151 (47%)
Query: 79 LDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVIN 138
L+L+ N I + ++F +L L + N+I A+ + F +KEL+ L L+ N++ V+
Sbjct: 66 LELNGNNITRIHKNDFAGLKQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLQVLP 125
Query: 139 KTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQS 198
+ F++ L L LS N + F L+ L+LD N+I + L +
Sbjct: 126 ELLFQNNQALSRLDLS-ENFLQAVPRKAFRGATDLKNLQLDKNRISCIEEGAFRAL--RG 182
Query: 199 LHYLYLNENLIETVLDNSFPFTLTNLHTLAL 229
L L LN N I T+ +SF + L T L
Sbjct: 183 LEVLTLNNNNITTIPVSSFNH-MPKLRTFRL 212
Score = 132 (51.5 bits), Expect = 2.4e-22, Sum P(4) = 2.4e-22
Identities = 41/121 (33%), Positives = 64/121 (52%)
Query: 335 PLGTLK-CDRLDLSGNNFSNIDSVAFKSLFS-LKLVKINLIPNLDSIDQRAFVDNIQLET 392
P G K L L GN F+ + S F L+LV ++ + S+ +F + QL T
Sbjct: 756 PKGIPKNVTELYLDGNQFTLVPGQL--STFKYLQLVDLSN-NKISSLSNSSFTNMSQLTT 812
Query: 393 VIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPLHCD 451
+I++ N L+ +P FQG +L+ +SL GN +S L+ F + +S L + NPL+CD
Sbjct: 813 LILSYNA-LQCIPPLAFQGLRSLRLLSLHGNDVSTLQEGIFADVTSLSHLAIGANPLYCD 871
Query: 452 C 452
C
Sbjct: 872 C 872
Score = 116 (45.9 bits), Expect = 9.9e-20, Sum P(3) = 9.9e-20
Identities = 37/116 (31%), Positives = 53/116 (45%)
Query: 340 KCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINEN 398
K R+DLS N + I AF+ L SL + L N + + + F L+ +++N N
Sbjct: 334 KLRRIDLSNNQIAEIAPDAFQGLRSLN--SLVLYGNKITDLPRGVFGGLYTLQLLLLNAN 391
Query: 399 MNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPLHCDCN 453
+ + FQ NL +SL N + L F L I L L+ NP CDCN
Sbjct: 392 -KINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQNPFICDCN 446
Score = 105 (42.0 bits), Expect = 2.1e-19, Sum P(4) = 2.1e-19
Identities = 31/113 (27%), Positives = 59/113 (52%)
Query: 343 RLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNL 401
+++LS N S I+ F+ S+ +++L N L+SI F L T+++ N +
Sbjct: 569 KINLSNNKVSEIEDGTFEGAASVS--ELHLTANQLESIRSGMFRGLDGLRTLMLRNN-RI 625
Query: 402 KQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPLHCDCN 453
+ + F G N++ +SL N ++ + F L+ +S L+L NP +C+C+
Sbjct: 626 SCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDTLQALSTLNLLANPFNCNCH 678
Score = 104 (41.7 bits), Expect = 3.0e-10, Sum P(3) = 3.0e-10
Identities = 34/109 (31%), Positives = 53/109 (48%)
Query: 53 VQTIILRENRISNVHY-TLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEIS 111
++ I L N++S + T + L L+ N++ + S F + L L + N IS
Sbjct: 567 LKKINLSNNKVSEIEDGTFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRIS 626
Query: 112 ALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLH----LELLILSFN 156
+ D+F GL+ ++ L L N I+ I+ AF DTL L LL FN
Sbjct: 627 CIHNDSFTGLRNVRLLSLYDNHITTISPGAF-DTLQALSTLNLLANPFN 674
Score = 102 (41.0 bits), Expect = 5.1e-11, Sum P(4) = 5.1e-11
Identities = 43/133 (32%), Positives = 55/133 (41%)
Query: 121 LKELKT-LDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLD 179
L E T + L N I I AF L + LS N I + F L+SL L L
Sbjct: 307 LPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAP-DAFQGLRSLNSLVLY 365
Query: 180 NNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXX 239
N+I D+P V L +L L LN N I + ++F L NL L+L
Sbjct: 366 GNKITDLPRGVFGGL--YTLQLLLLNANKINCIRPDAFQ-DLQNLSLLSLYDNKIQSLAK 422
Query: 240 XXXVTLR---TLH 249
+LR TLH
Sbjct: 423 GTFTSLRAIQTLH 435
Score = 96 (38.9 bits), Expect = 1.9e-09, Sum P(3) = 1.9e-09
Identities = 38/161 (23%), Positives = 62/161 (38%)
Query: 123 ELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQ 182
E ++ S K+S I + + T L L + N I+ E + +F L L+ + L NN+
Sbjct: 520 EASVVECSSLKLSKIPERIPQSTTELRL---NNNEISILEATGLFKKLSHLKKINLSNNK 576
Query: 183 ILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXX 242
+ ++ + S+ L+L N +E++ F L L TL L
Sbjct: 577 VSEIEDGTFEGAA--SVSELHLTANQLESIRSGMFR-GLDGLRTLMLRNNRISCIHNDSF 633
Query: 243 VTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFS 283
LR + I L AL L+L N F+
Sbjct: 634 TGLRNVRLLSLYDNHITTISPGAFDTLQALSTLNLLANPFN 674
Score = 89 (36.4 bits), Expect = 9.8e-09, Sum P(3) = 9.8e-09
Identities = 44/177 (24%), Positives = 68/177 (38%)
Query: 126 TLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILD 185
T+D + I K R+T LEL + NNIT ++ F+ LK LR+L+L NQI
Sbjct: 44 TVDCHGTGLQAIPKNIPRNTERLEL---NGNNITRIHKND-FAGLKQLRVLQLMENQIGA 99
Query: 186 VPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTL 245
V ++ + L L LN N ++ + + F L L L
Sbjct: 100 VERGAFDDM--KELERLRLNRNQLQVLPELLFQNNQA-LSRLDLSENFLQAVPRKAFRGA 156
Query: 246 RTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
L I L L L L+ NN + I +F + L+ +++
Sbjct: 157 TDLKNLQLDKNRISCIEEGAFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLH 213
Score = 58 (25.5 bits), Expect = 4.4e-11, Sum P(3) = 4.4e-11
Identities = 18/62 (29%), Positives = 34/62 (54%)
Query: 168 SSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTL 227
S+ K L+++ L NN+I + N+ +N+ L L L+ N ++ + +F L +L L
Sbjct: 781 STFKYLQLVDLSNNKISSLSNSSFTNM--SQLTTLILSYNALQCIPPLAFQ-GLRSLRLL 837
Query: 228 AL 229
+L
Sbjct: 838 SL 839
Score = 55 (24.4 bits), Expect = 2.2e-14, Sum P(4) = 2.2e-14
Identities = 20/87 (22%), Positives = 40/87 (45%)
Query: 337 GTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFVDNIQLETVIIN 396
G + L L GN +++ F L++L+L+ +N ++ I AF D L + +
Sbjct: 355 GLRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLNA-NKINCIRPDAFQDLQNLSLLSLY 413
Query: 397 ENMNLKQLPSKLFQGNTNLKSVSLKGN 423
+N ++ L F ++++ L N
Sbjct: 414 DN-KIQSLAKGTFTSLRAIQTLHLAQN 439
Score = 53 (23.7 bits), Expect = 2.2e-14, Sum P(4) = 2.2e-14
Identities = 15/59 (25%), Positives = 30/59 (50%)
Query: 390 LETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFPLERISFLDLSDNPL 448
L+TV+ N +L+ LP + + N+ + L GN + + + + +DLS+N +
Sbjct: 741 LDTVVRCSNKHLQALPKGIPK---NVTELYLDGNQFTLVPGQLSTFKYLQLVDLSNNKI 796
Score = 53 (23.7 bits), Expect = 2.7e-13, Sum P(3) = 2.7e-13
Identities = 15/59 (25%), Positives = 26/59 (44%)
Query: 244 TLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
T + L ++ + +S L L LS N I +AF+ L SL+L+ ++
Sbjct: 782 TFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLH 840
Score = 52 (23.4 bits), Expect = 2.4e-22, Sum P(4) = 2.4e-22
Identities = 17/49 (34%), Positives = 26/49 (53%)
Query: 263 TKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSI 310
T KLS L ++LS N S I+ F+ S+ +++L N L+SI
Sbjct: 558 TGLFKKLSHLKKINLSNNKVSEIEDGTFEGAASVS--ELHLTANQLESI 604
Score = 51 (23.0 bits), Expect = 5.6e-14, Sum P(4) = 5.6e-14
Identities = 14/42 (33%), Positives = 23/42 (54%)
Query: 408 LFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPL 448
LF+ ++LK ++L N +S +E F +S L L+ N L
Sbjct: 560 LFKKLSHLKKINLSNNKVSEIEDGTFEGAASVSELHLTANQL 601
Score = 50 (22.7 bits), Expect = 3.8e-22, Sum P(4) = 3.8e-22
Identities = 14/37 (37%), Positives = 18/37 (48%)
Query: 260 AIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSL 296
+IP S L +DLS N + I AF+ L SL
Sbjct: 323 SIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSL 359
Score = 48 (22.0 bits), Expect = 6.0e-22, Sum P(4) = 6.0e-22
Identities = 11/34 (32%), Positives = 21/34 (61%)
Query: 269 LSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
L +L +L L GN +++ F L++L+L+ +N
Sbjct: 356 LRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLN 389
Score = 47 (21.6 bits), Expect = 1.1e-12, Sum P(3) = 1.1e-12
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 265 QLSKLSALVNLDLSGNNFSNIDSVAFKSLFSL 296
QLS L +DLS N S++ + +F ++ L
Sbjct: 779 QLSTFKYLQLVDLSNNKISSLSNSSFTNMSQL 810
Score = 47 (21.6 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 513 KCSSPPDIKGLEVKAVPENSVHC 535
+CS P ++GL V V + C
Sbjct: 241 QCSGPASLRGLNVAEVQKGEFSC 263
Score = 46 (21.3 bits), Expect = 2.4e-22, Sum P(4) = 2.4e-22
Identities = 6/24 (25%), Positives = 13/24 (54%)
Query: 513 KCSSPPDIKGLEVKAVPENSVHCE 536
+C+ PP+++G + P C+
Sbjct: 892 RCAGPPEMEGKLLLTTPAKKFECQ 915
Score = 44 (20.5 bits), Expect = 8.8e-13, Sum P(3) = 8.8e-13
Identities = 34/160 (21%), Positives = 60/160 (37%)
Query: 395 IN-ENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPLHCDC 452
IN N + ++ F+G ++ + L N L + + F L+ + L L +N + C
Sbjct: 570 INLSNNKVSEIEDGTFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIH 629
Query: 453 NXXXXXXXXXXXXKSTMETTTVAYEMTSNTSISPGT--TTEAQRVDRIIKN----NHSLT 506
N Y+ T+ISPG T +A ++ N N L+
Sbjct: 630 NDSFTGLRNVRLLS--------LYD-NHITTISPGAFDTLQALSTLNLLANPFNCNCHLS 680
Query: 507 ----------IVLNNLKCSSPPDIKGLEVKAVPENSVHCE 536
IV N +C +P ++ + ++ V CE
Sbjct: 681 WLGDWLRKRKIVTGNPRCQNPDFLRQIPLQDVAFPDFRCE 720
Score = 41 (19.5 bits), Expect = 4.5e-12, Sum P(3) = 4.5e-12
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 470 ETTT-VAYEMTSNTSISPGTTTEAQRVDRI-IKNN 502
ET T + E+ SI PG + +++ RI + NN
Sbjct: 309 ETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNN 343
>MGI|MGI:1315205 [details] [associations]
symbol:Slit2 "slit homolog 2 (Drosophila)" species:10090
"Mus musculus" [GO:0001656 "metanephros development" evidence=IMP]
[GO:0001657 "ureteric bud development" evidence=ISO] [GO:0001701
"in utero embryonic development" evidence=IMP] [GO:0001933
"negative regulation of protein phosphorylation" evidence=ISO]
[GO:0002042 "cell migration involved in sprouting angiogenesis"
evidence=ISO] [GO:0002689 "negative regulation of leukocyte
chemotaxis" evidence=ISO] [GO:0005095 "GTPase inhibitor activity"
evidence=ISO] [GO:0005102 "receptor binding" evidence=TAS]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005615 "extracellular
space" evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=ISO] [GO:0006935
"chemotaxis" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IMP;IDA]
[GO:0007411 "axon guidance" evidence=ISO;IGI;IMP;IDA] [GO:0008045
"motor neuron axon guidance" evidence=ISO] [GO:0008201 "heparin
binding" evidence=ISO] [GO:0008285 "negative regulation of cell
proliferation" evidence=IGI] [GO:0009986 "cell surface"
evidence=ISO] [GO:0010593 "negative regulation of lamellipodium
assembly" evidence=ISO] [GO:0010596 "negative regulation of
endothelial cell migration" evidence=ISO] [GO:0010629 "negative
regulation of gene expression" evidence=IGI] [GO:0014912 "negative
regulation of smooth muscle cell migration" evidence=ISO]
[GO:0016337 "cell-cell adhesion" evidence=IGI;IMP] [GO:0021772
"olfactory bulb development" evidence=IGI] [GO:0021836
"chemorepulsion involved in postnatal olfactory bulb interneuron
migration" evidence=ISO] [GO:0021972 "corticospinal neuron axon
guidance through spinal cord" evidence=ISO] [GO:0022029
"telencephalon cell migration" evidence=IGI] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=ISO] [GO:0030336 "negative regulation of cell
migration" evidence=ISO] [GO:0030837 "negative regulation of actin
filament polymerization" evidence=ISO] [GO:0031290 "retinal
ganglion cell axon guidance" evidence=ISO;IGI;IMP] [GO:0033563
"dorsal/ventral axon guidance" evidence=IGI;IMP] [GO:0035385
"Roundabout signaling pathway" evidence=ISO] [GO:0042803 "protein
homodimerization activity" evidence=ISO] [GO:0043065 "positive
regulation of apoptotic process" evidence=ISO] [GO:0043086
"negative regulation of catalytic activity" evidence=ISO]
[GO:0043116 "negative regulation of vascular permeability"
evidence=ISO] [GO:0043237 "laminin-1 binding" evidence=ISO]
[GO:0043394 "proteoglycan binding" evidence=ISO] [GO:0043395
"heparan sulfate proteoglycan binding" evidence=ISO] [GO:0045499
"chemorepellent activity" evidence=IMP] [GO:0048495 "Roundabout
binding" evidence=ISO] [GO:0048754 "branching morphogenesis of an
epithelial tube" evidence=ISO] [GO:0048812 "neuron projection
morphogenesis" evidence=IGI;IMP] [GO:0048846 "axon extension
involved in axon guidance" evidence=ISO] [GO:0050728 "negative
regulation of inflammatory response" evidence=ISO] [GO:0050919
"negative chemotaxis" evidence=ISO;IMP] [GO:0050929 "induction of
negative chemotaxis" evidence=ISO] [GO:0051058 "negative regulation
of small GTPase mediated signal transduction" evidence=ISO]
[GO:0060603 "mammary gland duct morphogenesis" evidence=IGI;IMP]
[GO:0060763 "mammary duct terminal end bud growth" evidence=IMP]
[GO:0070100 "negative regulation of chemokine-mediated signaling
pathway" evidence=ISO] [GO:0071504 "cellular response to heparin"
evidence=ISO] [GO:0071672 "negative regulation of smooth muscle
cell chemotaxis" evidence=ISO] [GO:0071676 "negative regulation of
mononuclear cell migration" evidence=ISO] [GO:0090024 "negative
regulation of neutrophil chemotaxis" evidence=ISO] [GO:0090027
"negative regulation of monocyte chemotaxis" evidence=ISO]
[GO:0090260 "negative regulation of retinal ganglion cell axon
guidance" evidence=ISO] [GO:0090288 "negative regulation of
cellular response to growth factor stimulus" evidence=ISO]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 MGI:MGI:1315205 GO:GO:0005737 GO:GO:0008285
GO:GO:0005615 GO:GO:0009986 GO:GO:0030308 GO:GO:0001701
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005102 GO:GO:0008201 GO:GO:0005509
GO:GO:0043116 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0043065 GO:GO:0008045 GO:GO:0071504
GO:GO:0005095 GO:GO:0016337 PROSITE:PS01186 GO:GO:0032870
GO:GO:0030837 GO:GO:0010629 InterPro:IPR003645 InterPro:IPR001791
Pfam:PF00054 SMART:SM00274 SMART:SM00282 PROSITE:PS50025
GO:GO:0071672 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0001656 GO:GO:0010596 GO:GO:0001657 GO:GO:0001933
GO:GO:0048754 GO:GO:0071676 GO:GO:0031290 InterPro:IPR006207
PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041 GO:GO:0048846
GO:GO:0021772 GO:GO:0060763 GO:GO:0070100 GO:GO:0090288
GO:GO:0022029 GO:GO:0033563 GO:GO:0045499 GO:GO:0002042
Pfam:PF01463 GO:GO:0010593 GO:GO:0051414
GeneTree:ENSGT00700000104083 GO:GO:0090260 GO:GO:0021836
GO:GO:0061364 HOVERGEN:HBG057959 CTD:9353 KO:K06839 GO:GO:0021972
GO:GO:0050929 GO:GO:0090024 GO:GO:0051058 EMBL:AF144628
EMBL:AC101004 EMBL:AC113542 EMBL:AC157351 EMBL:AF074960
EMBL:BC059267 IPI:IPI00128415 PIR:T42626 RefSeq:NP_848919.3
UniGene:Mm.289739 ProteinModelPortal:Q9R1B9 SMR:Q9R1B9
STRING:Q9R1B9 PhosphoSite:Q9R1B9 PRIDE:Q9R1B9
Ensembl:ENSMUST00000170109 GeneID:20563 KEGG:mmu:20563
UCSC:uc008xjo.2 InParanoid:Q9R1B9 OrthoDB:EOG4D7Z4T ChiTaRS:SLIT2
NextBio:298857 Bgee:Q9R1B9 CleanEx:MM_SLIT2 Genevestigator:Q9R1B9
Uniprot:Q9R1B9
Length = 1521
Score = 212 (79.7 bits), Expect = 6.8e-13, Sum P(2) = 6.8e-13
Identities = 50/135 (37%), Positives = 73/135 (54%)
Query: 22 CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSFYIELRSLDL 81
CPS C C D + C++ GL+V+P + +V + L N+ + V LS Y L +DL
Sbjct: 719 CPSECTCLDTVVR--CSNKGLKVLPKGIPKDVTELYLDGNQFTLVPKELSNYKHLTLIDL 776
Query: 82 SVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTA 141
S N+I+ L + +F +LL L +SYN + + TF GLK L+ L L N ISV+ + A
Sbjct: 777 SNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGA 836
Query: 142 FRDTLHLELLILSFN 156
F D L L + N
Sbjct: 837 FNDLSALSHLAIGAN 851
Score = 194 (73.4 bits), Expect = 4.0e-22, Sum P(4) = 4.0e-22
Identities = 57/201 (28%), Positives = 96/201 (47%)
Query: 10 LILA-LTKLNKAICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNV-H 67
L+L+ L K+ CP++C C ++ C L VP + + + L N I+ +
Sbjct: 15 LVLSILNKVAPQACPAQCSCSGSTVD--CHGLALRSVPRNIPRNTERLDLNGNNITRITK 72
Query: 68 YTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTL 127
+ LR L L N+I+ + F+ +L L ++ N + + F G +L L
Sbjct: 73 IDFAGLRHLRVLQLMENRISTIERGAFQDLKELERLRLNRNNLQLFPELLFLGTAKLYRL 132
Query: 128 DLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVP 187
DLS N+I I + AFR + ++ L L +N I+ ED F +L+ L +L L+NN I +
Sbjct: 133 DLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGA-FRALRDLEVLTLNNNNITRLS 191
Query: 188 NNVLSNLPHQSLHYLYLNENL 208
+++P L+ N NL
Sbjct: 192 VASFNHMPKLRTFRLHSN-NL 211
Score = 184 (69.8 bits), Expect = 1.8e-19, Sum P(3) = 1.8e-19
Identities = 53/164 (32%), Positives = 84/164 (51%)
Query: 22 CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHY-TLSFYIELRSLD 80
CP+ C C + ++ C GL +P L + I L +N I + S Y +LR LD
Sbjct: 273 CPAACTCSNNIVD--CRGKGLTEIPTNLPETITEIRLEQNSIRVIPPGAFSPYKKLRRLD 330
Query: 81 LSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKT 140
LS N+I+ L F+ L +L + N+I+ L K F+GL L+ L L+ NKI+ +
Sbjct: 331 LSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVD 390
Query: 141 AFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQIL 184
AF+D +L LL L N + FS+L++++ + L N +
Sbjct: 391 AFQDLHNLNLLSLYDNKLQTVAKGT-FSALRAIQTMHLAQNPFI 433
Score = 162 (62.1 bits), Expect = 4.7e-17, Sum P(3) = 4.7e-17
Identities = 46/151 (30%), Positives = 76/151 (50%)
Query: 76 LRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKIS 135
+ + L N I V+ F KL L++S N+IS L+ D F+GL+ L +L L NKI+
Sbjct: 302 ITEIRLEQNSIRVIPPGAFSPYKKLRRLDLSNNQISELAPDAFQGLRSLNSLVLYGNKIT 361
Query: 136 VINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLP 195
+ K+ F L+LL+L+ N I + F L +L +L L +N++ V S L
Sbjct: 362 ELPKSLFEGLFSLQLLLLNANKINCLR-VDAFQDLHNLNLLSLYDNKLQTVAKGTFSAL- 419
Query: 196 HQSLHYLYLNENLIETVLDNSFPFTLTNLHT 226
+++ ++L +N + D + LHT
Sbjct: 420 -RAIQTMHLAQNPF--ICDCHLKWLADYLHT 447
Score = 148 (57.2 bits), Expect = 1.6e-15, Sum P(3) = 1.6e-15
Identities = 46/159 (28%), Positives = 72/159 (45%)
Query: 22 CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSF--YIELRSL 79
CP +C+C + C++ L +P + + L N + + T F +LR +
Sbjct: 498 CPEKCRC--EGTTVDCSNQRLNKIPDHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKI 555
Query: 80 DLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINK 139
+ S NKI + FE + + + ++ N + + FKGL+ LKTL L N+IS +
Sbjct: 556 NFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRISCVGN 615
Query: 140 TAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKL 178
+F + LL L N IT F SL SL L L
Sbjct: 616 DSFIGLGSVRLLSLYDNQITTVAPGA-FDSLHSLSTLNL 653
Score = 146 (56.5 bits), Expect = 9.8e-17, Sum P(4) = 9.8e-17
Identities = 42/127 (33%), Positives = 63/127 (49%)
Query: 103 LNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFE 162
L+++ N I+ ++K F GL+ L+ L L N+IS I + AF+D LE L L+ NN+ F
Sbjct: 60 LDLNGNNITRITKIDFAGLRHLRVLQLMENRISTIERGAFQDLKELERLRLNRNNLQLFP 119
Query: 163 DSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLT 222
+ + K R L L NQI +P + L L+ N I + D +F L
Sbjct: 120 ELLFLGTAKLYR-LDLSENQIQAIPRKAFRGAV--DIKNLQLDYNQISCIEDGAFR-ALR 175
Query: 223 NLHTLAL 229
+L L L
Sbjct: 176 DLEVLTL 182
Score = 139 (54.0 bits), Expect = 4.0e-22, Sum P(4) = 4.0e-22
Identities = 42/123 (34%), Positives = 66/123 (53%)
Query: 335 PLGTLK-CDRLDLSGNNFSNIDSVAFKSLFSLK-LVKINLIPN-LDSIDQRAFVDNIQLE 391
P G K L L GN F+ + K L + K L I+L N + ++ ++F + QL
Sbjct: 741 PKGIPKDVTELYLDGNQFTLVP----KELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLL 796
Query: 392 TVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHF-PLERISFLDLSDNPLHC 450
T+I++ N L+ +P + F G +L+ +SL GN +S + F L +S L + NPL+C
Sbjct: 797 TLILSYN-RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 855
Query: 451 DCN 453
DCN
Sbjct: 856 DCN 858
Score = 113 (44.8 bits), Expect = 6.9e-18, Sum P(3) = 6.9e-18
Identities = 37/116 (31%), Positives = 53/116 (45%)
Query: 340 KCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINEN 398
K RLDLS N S + AF+ L SL + L N + + + F L+ +++N N
Sbjct: 325 KLRRLDLSNNQISELAPDAFQGLRSLN--SLVLYGNKITELPKSLFEGLFSLQLLLLNAN 382
Query: 399 MNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPLHCDCN 453
+ L FQ NL +SL N L + F L I + L+ NP CDC+
Sbjct: 383 -KINCLRVDAFQDLHNLNLLSLYDNKLQTVAKGTFSALRAIQTMHLAQNPFICDCH 437
Score = 97 (39.2 bits), Expect = 7.2e-18, Sum P(4) = 7.2e-18
Identities = 31/108 (28%), Positives = 56/108 (51%)
Query: 344 LDLSGNNFSNIDSVA-FKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNL 401
L L+ N F+ +++ FK L L+ KIN N + I++ AF + +++ N L
Sbjct: 530 LRLNNNEFTVLEATGIFKKLPQLR--KINFSNNKITDIEEGAFEGASGVNEILLTSN-RL 586
Query: 402 KQLPSKLFQGNTNLKSVSLKGNSLSHLEASHF-PLERISFLDLSDNPL 448
+ + K+F+G +LK++ L+ N +S + F L + L L DN +
Sbjct: 587 ENVQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLGSVRLLSLYDNQI 634
Score = 96 (38.9 bits), Expect = 1.1e-11, Sum P(4) = 1.1e-11
Identities = 32/96 (33%), Positives = 46/96 (47%)
Query: 122 KELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNN 181
+ + LDL+ N I+ I K F HL +L L N I+ E F LK L L+L+ N
Sbjct: 55 RNTERLDLNGNNITRITKIDFAGLRHLRVLQLMENRISTIERGA-FQDLKELERLRLNRN 113
Query: 182 QILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSF 217
+ P L L L+ L L+EN I+ + +F
Sbjct: 114 NLQLFPE--LLFLGTAKLYRLDLSENQIQAIPRKAF 147
Score = 92 (37.4 bits), Expect = 2.3e-17, Sum P(4) = 2.3e-17
Identities = 27/113 (23%), Positives = 59/113 (52%)
Query: 343 RLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNL 401
+++ S N ++I+ AF+ + +I L N L+++ + F L+T+++ N +
Sbjct: 554 KINFSNNKITDIEEGAFEGASGVN--EILLTSNRLENVQHKMFKGLESLKTLMLRSN-RI 610
Query: 402 KQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPLHCDCN 453
+ + F G +++ +SL N ++ + F L +S L+L NP +C+C+
Sbjct: 611 SCVGNDSFIGLGSVRLLSLYDNQITTVAPGAFDSLHSLSTLNLLANPFNCNCH 663
Score = 88 (36.0 bits), Expect = 2.2e-09, Sum P(3) = 2.2e-09
Identities = 30/111 (27%), Positives = 53/111 (47%)
Query: 51 PEVQTIILRENRISNVHY-TLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNE 109
P+++ I N+I+++ + + L+ N++ + F+ L L + N
Sbjct: 550 PQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNR 609
Query: 110 ISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLH----LELLILSFN 156
IS + D+F GL ++ L L N+I+ + AF D+LH L LL FN
Sbjct: 610 ISCVGNDSFIGLGSVRLLSLYDNQITTVAPGAF-DSLHSLSTLNLLANPFN 659
Score = 87 (35.7 bits), Expect = 2.7e-09, Sum P(3) = 2.7e-09
Identities = 36/158 (22%), Positives = 58/158 (36%)
Query: 126 TLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILD 185
T+D S +++ I + T L L + N T E + IF L LR + NN+I D
Sbjct: 508 TVDCSNQRLNKIPDHIPQYTAELRL---NNNEFTVLEATGIFKKLPQLRKINFSNNKITD 564
Query: 186 VPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTL 245
+ ++ + L N +E V F L +L TL L + L
Sbjct: 565 IEEGAFEGA--SGVNEILLTSNRLENVQHKMFK-GLESLKTLMLRSNRISCVGNDSFIGL 621
Query: 246 RTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFS 283
++ + L +L L+L N F+
Sbjct: 622 GSVRLLSLYDNQITTVAPGAFDSLHSLSTLNLLANPFN 659
Score = 86 (35.3 bits), Expect = 4.8e-14, Sum P(3) = 4.8e-14
Identities = 33/110 (30%), Positives = 46/110 (41%)
Query: 171 KSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALX 230
K + L LD NQ VP LSN H +L + L+ N I T+ + SF +T L TL L
Sbjct: 746 KDVTELYLDGNQFTLVPKE-LSNYKHLTL--IDLSNNRISTLSNQSFS-NMTQLLTLILS 801
Query: 231 XXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGN 280
L++L +P + LSAL +L + N
Sbjct: 802 YNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGAN 851
Score = 82 (33.9 bits), Expect = 8.6e-09, Sum P(3) = 8.6e-09
Identities = 34/127 (26%), Positives = 49/127 (38%)
Query: 176 LKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXX 235
L L+ N I + + L H L L L EN I T+ +F L L L L
Sbjct: 60 LDLNGNNITRITKIDFAGLRH--LRVLQLMENRISTIERGAFQ-DLKELERLRLNRNNLQ 116
Query: 236 XXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFS 295
+ L+ AIP K + NL L N S I+ AF++L
Sbjct: 117 LFPELLFLGTAKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRD 176
Query: 296 LKLVKIN 302
L+++ +N
Sbjct: 177 LEVLTLN 183
Score = 69 (29.3 bits), Expect = 2.1e-13, Sum P(3) = 2.1e-13
Identities = 25/86 (29%), Positives = 42/86 (48%)
Query: 367 LVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSL 425
+ +I L N + I AF +L + ++ N + +L FQG +L S+ L GN +
Sbjct: 302 ITEIRLEQNSIRVIPPGAFSPYKKLRRLDLSNNQ-ISELAPDAFQGLRSLNSLVLYGNKI 360
Query: 426 SHLEASHFP-LERISFLDLSDNPLHC 450
+ L S F L + L L+ N ++C
Sbjct: 361 TELPKSLFEGLFSLQLLLLNANKINC 386
Score = 60 (26.2 bits), Expect = 1.7e-12, Sum P(3) = 1.7e-12
Identities = 21/87 (24%), Positives = 40/87 (45%)
Query: 337 GTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFVDNIQLETVIIN 396
G + L L GN + + F+ LFSL+L+ +N ++ + AF D L + +
Sbjct: 346 GLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNA-NKINCLRVDAFQDLHNLNLLSLY 404
Query: 397 ENMNLKQLPSKLFQGNTNLKSVSLKGN 423
+N L+ + F ++++ L N
Sbjct: 405 DN-KLQTVAKGTFSALRAIQTMHLAQN 430
Score = 58 (25.5 bits), Expect = 4.0e-22, Sum P(4) = 4.0e-22
Identities = 27/126 (21%), Positives = 50/126 (39%)
Query: 180 NNQILDVPNNVLSNLPH---QSLHYLYLNENLIETVLDNSF-PFTLTNLHTLALXXXXXX 235
+N I+D L+ +P +++ + L +N I + +F P+ L L L
Sbjct: 280 SNNIVDCRGKGLTEIPTNLPETITEIRLEQNSIRVIPPGAFSPYK--KLRRLDLSNNQIS 337
Query: 236 XXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFS 295
LR+L+ +P L +L L L+ N + + AF+ L +
Sbjct: 338 ELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHN 397
Query: 296 LKLVKI 301
L L+ +
Sbjct: 398 LNLLSL 403
Score = 57 (25.1 bits), Expect = 5.1e-22, Sum P(4) = 5.1e-22
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 269 LSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
L +L +L L GN + + F+ LFSL+L+ +N
Sbjct: 347 LRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLN 380
Score = 53 (23.7 bits), Expect = 1.9e-13, Sum P(4) = 1.9e-13
Identities = 17/57 (29%), Positives = 28/57 (49%)
Query: 390 LETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFPLERISFLDLSDN 446
L+TV+ N LK LP + + T L L GN + + + ++ +DLS+N
Sbjct: 726 LDTVVRCSNKGLKVLPKGIPKDVTELY---LDGNQFTLVPKELSNYKHLTLIDLSNN 779
Score = 53 (23.7 bits), Expect = 8.9e-12, Sum P(3) = 8.9e-12
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 261 IPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSL 296
+P K+LS L +DLS N S + + +F ++ L
Sbjct: 761 VP-KELSNYKHLTLIDLSNNRISTLSNQSFSNMTQL 795
Score = 53 (23.7 bits), Expect = 8.9e-12, Sum P(3) = 8.9e-12
Identities = 15/45 (33%), Positives = 21/45 (46%)
Query: 261 IPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIP 305
IP + L +L L L GN+ S + AF L +L + I P
Sbjct: 808 IPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANP 852
Score = 46 (21.3 bits), Expect = 4.0e-22, Sum P(4) = 4.0e-22
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 496 DRIIKNNHSLTIVLNNLKCSSPPDIKG 522
D +NN + +NN C PP+ G
Sbjct: 996 DNDCENNSTCVDGINNYTCLCPPEYTG 1022
Score = 45 (20.9 bits), Expect = 3.7e-12, Sum P(4) = 3.7e-12
Identities = 26/115 (22%), Positives = 46/115 (40%)
Query: 268 KLSALVNLDLSGNNFSNIDSVAFKSLFSLK--LVKINLIPNLD-----SIDQXXXXXXXX 320
KL L ++ S N ++I+ AF+ + L+ N + N+ ++
Sbjct: 548 KLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRS 607
Query: 321 XXXXXXXXXAFSLTPLGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN 375
+F LG+++ L L N + + AF SL SL +NL+ N
Sbjct: 608 NRISCVGNDSF--IGLGSVRL--LSLYDNQITTVAPGAFDSLHSLST--LNLLAN 656
Score = 39 (18.8 bits), Expect = 3.7e-17, Sum P(4) = 3.7e-17
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 505 LTIVL--NNLKCSSPPDIKGLE 524
LT++L N L+C P GL+
Sbjct: 796 LTLILSYNRLRCIPPRTFDGLK 817
Score = 38 (18.4 bits), Expect = 4.6e-17, Sum P(4) = 4.6e-17
Identities = 8/30 (26%), Positives = 14/30 (46%)
Query: 507 IVLNNLKCSSPPDIKGLEVKAVPENSVHCE 536
IV N +C P +K + ++ V C+
Sbjct: 676 IVTGNPRCQKPYFLKEIPIQDVAIQDFTCD 705
>ZFIN|ZDB-GENE-030722-3 [details] [associations]
symbol:slit1a "slit homolog 1a (Drosophila)"
species:7955 "Danio rerio" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0007411 "axon guidance" evidence=NAS] [GO:0005576
"extracellular region" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IMP] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152
ZFIN:ZDB-GENE-030722-3 GO:GO:0007411 GO:GO:0005576
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 GO:GO:0045773 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 Pfam:PF12661
GO:GO:0051964 Pfam:PF01463 HOVERGEN:HBG057959 KO:K06838
EMBL:DQ177286 IPI:IPI00506990 RefSeq:NP_001030140.1
UniGene:Dr.88478 ProteinModelPortal:Q3S2J2 SMR:Q3S2J2 STRING:Q3S2J2
GeneID:556123 KEGG:dre:556123 CTD:556123 NextBio:20881326
Uniprot:Q3S2J2
Length = 1524
Score = 200 (75.5 bits), Expect = 2.3e-21, Sum P(4) = 2.3e-21
Identities = 57/210 (27%), Positives = 103/210 (49%)
Query: 7 CIFLILALTKLNKAICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNV 66
C++++L + K CP+ C C ++ C GL+ +P + + + L N ++ +
Sbjct: 13 CVWVLLLVCKTGSG-CPALCTCSGTTVD--CHGLGLKNIPRNIPRNTERLELNGNNLTRI 69
Query: 67 H---YTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKE 123
+ +T Y LR L L N+I + F+ +L L ++ N++ L + F+
Sbjct: 70 NRNDFTGLKY--LRVLQLMENQIVTVERGAFDEMRELERLRLNRNQLHQLPELLFQKNAA 127
Query: 124 LKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQI 183
L LDLS N I I + AFR ++ L L N+I+ ED F +++ L +L L+NN I
Sbjct: 128 LSRLDLSENFIQAIPRKAFRGATDIKNLQLDKNHISCIEDGA-FRAMRGLEVLTLNNNNI 186
Query: 184 LDVPNNVLSNLPHQSLHYLYLNENLIETVL 213
+P + +++P L+ N + + VL
Sbjct: 187 SSIPVSSFNHMPKLRTFRLHSNNLVCDCVL 216
Score = 182 (69.1 bits), Expect = 2.9e-19, Sum P(4) = 2.9e-19
Identities = 53/169 (31%), Positives = 84/169 (49%)
Query: 17 LNKAICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHY-TLSFYIE 75
L+ CP+ C C + ++ C G ++P L + I L +N I ++ S Y +
Sbjct: 270 LSSGSCPAVCSCNNNIVD--CRGKGPTLIPSSLPDSMTEIRLEQNSIKSIPPGAFSPYKK 327
Query: 76 LRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKIS 135
LR +DLS N+I+ L F+ L +L + N+I+ L + F GL L+ L L+ NKI
Sbjct: 328 LRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITDLPRGVFDGLHALQLLLLNANKIH 387
Query: 136 VINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQIL 184
+ F+D +L LL L N I FSSL++++ L L N +
Sbjct: 388 CLRANTFQDLQNLSLLSLYDNKIQTLAKGT-FSSLRAIQTLHLAQNPFI 435
Score = 163 (62.4 bits), Expect = 4.7e-17, Sum P(3) = 4.7e-17
Identities = 44/163 (26%), Positives = 81/163 (49%)
Query: 18 NKAICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSF--YIE 75
N +CP++C+C ++ C++ L+ +P + L N I+ + +F
Sbjct: 502 NDPVCPAKCRCESNVVD--CSNLRLDRIPEHVPASTTEPRLNNNEITTIEAMGAFKTLTH 559
Query: 76 LRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKIS 135
L+ ++LS NKI+ + FE + + L+++ N++ F+GL+ L+ L L N+IS
Sbjct: 560 LKKINLSNNKISEIEDGAFEGASSVNELHLTANQLDLAHSGMFRGLEGLRMLMLRNNRIS 619
Query: 136 VINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKL 178
I+ +F ++ LL L N +T F +L+SL L L
Sbjct: 620 CIHNNSFTGLHNVRLLSLYDNTLTTIAPGA-FDTLQSLSTLNL 661
Score = 159 (61.0 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 40/135 (29%), Positives = 67/135 (49%)
Query: 22 CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSFYIELRSLDL 81
CP+ C C + + C++ L+ +P + + L N++S V LS + L+ +DL
Sbjct: 727 CPADCTCLESVVR--CSNKHLQALPKGTPRNITELYLDGNQLSTVPKELSSFKSLQLVDL 784
Query: 82 SVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTA 141
S N+I+ L + +F ++L L +SYN + + F GL+ L+ L L N IS +
Sbjct: 785 SNNRISSLTNSSFTNMSQLTTLILSYNALRCIPTLAFSGLRSLRLLSLHGNDISELPDGI 844
Query: 142 FRDTLHLELLILSFN 156
F D L L + N
Sbjct: 845 FSDAQSLSHLAIGAN 859
Score = 147 (56.8 bits), Expect = 2.3e-21, Sum P(4) = 2.3e-21
Identities = 41/120 (34%), Positives = 63/120 (52%)
Query: 335 PLGTLK-CDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFVDNIQLETV 393
P GT + L L GN S + S SL+LV ++ + S+ +F + QL T+
Sbjct: 749 PKGTPRNITELYLDGNQLSTVPK-ELSSFKSLQLVDLSN-NRISSLTNSSFTNMSQLTTL 806
Query: 394 IINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPLHCDC 452
I++ N L+ +P+ F G +L+ +SL GN +S L F + +S L + NPLHCDC
Sbjct: 807 ILSYNA-LRCIPTLAFSGLRSLRLLSLHGNDISELPDGIFSDAQSLSHLAIGANPLHCDC 865
Score = 145 (56.1 bits), Expect = 4.1e-15, Sum P(3) = 4.1e-15
Identities = 45/126 (35%), Positives = 67/126 (53%)
Query: 105 ISYNEISAL-SKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFED 163
++ NEI+ + + FK L LK ++LS NKIS I AF + L L+ N +
Sbjct: 540 LNNNEITTIEAMGAFKTLTHLKKINLSNNKISEIEDGAFEGASSVNELHLTANQLD-LAH 598
Query: 164 SEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTN 223
S +F L+ LR+L L NN+I + NN + L + L LY +N + T+ +F TL +
Sbjct: 599 SGMFRGLEGLRMLMLRNNRISCIHNNSFTGLHNVRLLSLY--DNTLTTIAPGAFD-TLQS 655
Query: 224 LHTLAL 229
L TL L
Sbjct: 656 LSTLNL 661
Score = 144 (55.7 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 36/108 (33%), Positives = 61/108 (56%)
Query: 100 LLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNIT 159
+ L + N++S + K+ K L+ +DLS N+IS + ++F + L LILS+N +
Sbjct: 756 ITELYLDGNQLSTVPKE-LSSFKSLQLVDLSNNRISSLTNSSFTNMSQLTTLILSYNALR 814
Query: 160 YFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNEN 207
+ FS L+SLR+L L N I ++P+ + S+ QSL +L + N
Sbjct: 815 CIP-TLAFSGLRSLRLLSLHGNDISELPDGIFSDA--QSLSHLAIGAN 859
Score = 126 (49.4 bits), Expect = 0.00050, P = 0.00050
Identities = 54/213 (25%), Positives = 90/213 (42%)
Query: 342 DRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFVDNIQLETVIINENMNL 401
+RL+L+GNN + I+ F L L+++++ + + ++++ AF + +LE + +N N L
Sbjct: 57 ERLELNGNNLTRINRNDFTGLKYLRVLQL-MENQIVTVERGAFDEMRELERLRLNRNQ-L 114
Query: 402 KQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPLHCDCNXXXXXXX 460
QLP LFQ N L + L N + + F I L L N H C
Sbjct: 115 HQLPELLFQKNAALSRLDLSENFIQAIPRKAFRGATDIKNLQLDKN--HISC-----IED 167
Query: 461 XXXXXKSTMETTTVAYEMTSNTSISPGTTTEAQRVDRIIKNNHSLTIVLN---------- 510
+E T+ S+ +S R R+ NN VL+
Sbjct: 168 GAFRAMRGLEVLTLNNNNISSIPVSSFNHMPKLRTFRLHSNNLVCDCVLSWLSQWLRERP 227
Query: 511 NL----KCSSPPDIKGLEVKAVPENSVHCESNT 539
N+ +CSSP ++GL V V ++ C +
Sbjct: 228 NIGLFTQCSSPAPLRGLNVAEVQKHEFSCSGQS 260
Score = 123 (48.4 bits), Expect = 7.1e-13, Sum P(3) = 7.1e-13
Identities = 43/179 (24%), Positives = 79/179 (44%)
Query: 30 DQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNV-HYTLSFYIELRSLDLSVNKINV 88
D +L C + V P + E + R+ + + + E R + + I
Sbjct: 493 DSRLNNDCNND--PVCPAKCRCESNVVDCSNLRLDRIPEHVPASTTEPRLNNNEITTIEA 550
Query: 89 LGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHL 148
+G+ F+ L +N+S N+IS + F+G + L L+ N++ + + FR L
Sbjct: 551 MGA--FKTLTHLKKINLSNNKISEIEDGAFEGASSVNELHLTANQLDLAHSGMFRGLEGL 608
Query: 149 ELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNEN 207
+L+L N I+ ++ F+ L ++R+L L +N + + L QSL L L N
Sbjct: 609 RMLMLRNNRISCIHNNS-FTGLHNVRLLSLYDNTLTTIAPGAFDTL--QSLSTLNLLAN 664
Score = 122 (48.0 bits), Expect = 1.5e-18, Sum P(3) = 1.5e-18
Identities = 40/118 (33%), Positives = 56/118 (47%)
Query: 340 KCDRLDLSGNNFSNIDSVAFKSLFSLKLVKI--NLIPNLDSIDQRAFVDNIQ-LETVIIN 396
K R+DLS N S + AF+ L SL + + N I +L R D + L+ +++N
Sbjct: 327 KLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITDLP----RGVFDGLHALQLLLLN 382
Query: 397 ENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPLHCDCN 453
N + L + FQ NL +SL N + L F L I L L+ NP CDCN
Sbjct: 383 AN-KIHCLRANTFQDLQNLSLLSLYDNKIQTLAKGTFSSLRAIQTLHLAQNPFICDCN 439
Score = 110 (43.8 bits), Expect = 7.7e-12, Sum P(4) = 7.7e-12
Identities = 34/127 (26%), Positives = 59/127 (46%)
Query: 103 LNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFE 162
L ++ N ++ ++++ F GLK L+ L L N+I + + AF + LE L L+ N +
Sbjct: 59 LELNGNNLTRINRNDFTGLKYLRVLQLMENQIVTVERGAFDEMRELERLRLNRNQLHQLP 118
Query: 163 DSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLT 222
+ +F +L L L N I +P + L L++N I + D +F +
Sbjct: 119 EL-LFQKNAALSRLDLSENFIQAIPRKAFRGAT--DIKNLQLDKNHISCIEDGAFR-AMR 174
Query: 223 NLHTLAL 229
L L L
Sbjct: 175 GLEVLTL 181
Score = 105 (42.0 bits), Expect = 3.0e-11, Sum P(4) = 3.0e-11
Identities = 42/124 (33%), Positives = 53/124 (42%)
Query: 129 LSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPN 188
L N I I AF L + LS N I+ + F L+SL L L N+I D+P
Sbjct: 309 LEQNSIKSIPPGAFSPYKKLRRIDLSNNQISELAP-DAFQGLRSLNSLVLYGNKITDLPR 367
Query: 189 NVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLR-- 246
V L H +L L LN N I + N+F L NL L+L +LR
Sbjct: 368 GVFDGL-H-ALQLLLLNANKIHCLRANTFQ-DLQNLSLLSLYDNKIQTLAKGTFSSLRAI 424
Query: 247 -TLH 249
TLH
Sbjct: 425 QTLH 428
Score = 100 (40.3 bits), Expect = 1.3e-16, Sum P(4) = 1.3e-16
Identities = 31/112 (27%), Positives = 57/112 (50%)
Query: 343 RLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNL 401
+++LS N S I+ AF+ S+ +++L N LD F L +++ N +
Sbjct: 562 KINLSNNKISEIEDGAFEGASSVN--ELHLTANQLDLAHSGMFRGLEGLRMLMLRNN-RI 618
Query: 402 KQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPLHCDC 452
+ + F G N++ +SL N+L+ + F L+ +S L+L NP +C+C
Sbjct: 619 SCIHNNSFTGLHNVRLLSLYDNTLTTIAPGAFDTLQSLSTLNLLANPFNCNC 670
Score = 85 (35.0 bits), Expect = 4.9e-09, Sum P(3) = 4.9e-09
Identities = 32/109 (29%), Positives = 50/109 (45%)
Query: 53 VQTIILRENRISNVHY-TLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEIS 111
++ I L N+IS + + L L+ N++++ S F L L + N IS
Sbjct: 560 LKKINLSNNKISEIEDGAFEGASSVNELHLTANQLDLAHSGMFRGLEGLRMLMLRNNRIS 619
Query: 112 ALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLH----LELLILSFN 156
+ ++F GL ++ L L N ++ I AF DTL L LL FN
Sbjct: 620 CIHNNSFTGLHNVRLLSLYDNTLTTIAPGAF-DTLQSLSTLNLLANPFN 667
Score = 81 (33.6 bits), Expect = 1.2e-08, Sum P(3) = 1.2e-08
Identities = 35/135 (25%), Positives = 55/135 (40%)
Query: 176 LKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXX 235
L+L+ N + + N + L + L L L EN I TV +F + L L L
Sbjct: 59 LELNGNNLTRINRNDFTGLKY--LRVLQLMENQIVTVERGAFD-EMRELERLRLNRNQLH 115
Query: 236 XXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFS 295
L AIP K + + NL L N+ S I+ AF+++
Sbjct: 116 QLPELLFQKNAALSRLDLSENFIQAIPRKAFRGATDIKNLQLDKNHISCIEDGAFRAMRG 175
Query: 296 LKLVKINLIPNLDSI 310
L+++ +N N+ SI
Sbjct: 176 LEVLTLNN-NNISSI 189
Score = 71 (30.1 bits), Expect = 2.2e-11, Sum P(3) = 2.2e-11
Identities = 27/110 (24%), Positives = 46/110 (41%)
Query: 171 KSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALX 230
+++ L LD NQ+ VP + S +SL + L+ N I ++ ++SF ++ L TL L
Sbjct: 754 RNITELYLDGNQLSTVPKELSS---FKSLQLVDLSNNRISSLTNSSFT-NMSQLTTLILS 809
Query: 231 XXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGN 280
LR+L +P S +L +L + N
Sbjct: 810 YNALRCIPTLAFSGLRSLRLLSLHGNDISELPDGIFSDAQSLSHLAIGAN 859
Score = 56 (24.8 bits), Expect = 1.2e-12, Sum P(3) = 1.2e-12
Identities = 34/167 (20%), Positives = 63/167 (37%)
Query: 383 AFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFL 441
AF L+ + ++ N + ++ F+G +++ + L N L + F LE + L
Sbjct: 553 AFKTLTHLKKINLSNN-KISEIEDGAFEGASSVNELHLTANQLDLAHSGMFRGLEGLRML 611
Query: 442 DLSDNPLHCDCNXXXXXXXXXXXXKSTMET-TTVA---YEM-----TSNTSISP-GTTTE 491
L +N + C N T TT+A ++ T N +P
Sbjct: 612 MLRNNRISCIHNNSFTGLHNVRLLSLYDNTLTTIAPGAFDTLQSLSTLNLLANPFNCNCR 671
Query: 492 AQRVDRIIKNNHSLTIVLNNLKCSSPPDIKGLEVKAVPENSVHCESN 538
+ ++N IV N +C P +K + ++ V CE +
Sbjct: 672 LAWLSSWLRNRK---IVTGNPRCHRPAFLKEIPLQDVAAPDFRCEDD 715
Score = 53 (23.7 bits), Expect = 1.6e-11, Sum P(3) = 1.6e-11
Identities = 12/36 (33%), Positives = 22/36 (61%)
Query: 261 IPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSL 296
+P K+LS +L +DLS N S++ + +F ++ L
Sbjct: 769 VP-KELSSFKSLQLVDLSNNRISSLTNSSFTNMSQL 803
Score = 53 (23.7 bits), Expect = 7.7e-06, Sum P(3) = 7.7e-06
Identities = 30/132 (22%), Positives = 54/132 (40%)
Query: 180 NNQILDV----PNNVLSNLPHQSLHYLYLNENLIETVLDNSF-PFTLTNLHTLALXXXXX 234
NN I+D P + S+LP S+ + L +N I+++ +F P+ L + L
Sbjct: 282 NNNIVDCRGKGPTLIPSSLP-DSMTEIRLEQNSIKSIPPGAFSPYK--KLRRIDLSNNQI 338
Query: 235 XXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSAL----VNLD----LSGNNFSNID 286
LR+L+ +P L AL +N + L N F ++
Sbjct: 339 SELAPDAFQGLRSLNSLVLYGNKITDLPRGVFDGLHALQLLLLNANKIHCLRANTFQDLQ 398
Query: 287 SVAFKSLFSLKL 298
+++ SL+ K+
Sbjct: 399 NLSLLSLYDNKI 410
Score = 52 (23.4 bits), Expect = 3.2e-12, Sum P(3) = 3.2e-12
Identities = 34/148 (22%), Positives = 58/148 (39%)
Query: 390 LETVIINENMNLKQLPSKLFQGNT-NLKSVSLKGNSLSHLEASHFPLERISFLDLSDNPL 448
LE+V+ N +L+ LP +G N+ + L GN LS + + + +DLS+N +
Sbjct: 734 LESVVRCSNKHLQALP----KGTPRNITELYLDGNQLSTVPKELSSFKSLQLVDLSNNRI 789
Query: 449 HCDCNXXXXXXXXXXXXKSTMETTTVAYEMTSNTSISPGTTTEAQRVDRIIKNNHSLTIV 508
N S + T ++Y P R R++ + H I
Sbjct: 790 SSLTNSSFTNM-------SQLTTLILSYNALR---CIPTLAFSGLRSLRLL-SLHGNDI- 837
Query: 509 LNNLKCSSPPDIKGLEVKAVPENSVHCE 536
+ L D + L A+ N +HC+
Sbjct: 838 -SELPDGIFSDAQSLSHLAIGANPLHCD 864
Score = 52 (23.4 bits), Expect = 2.0e-11, Sum P(3) = 2.0e-11
Identities = 13/43 (30%), Positives = 23/43 (53%)
Query: 260 AIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
++ + +S L L LS N I ++AF L SL+L+ ++
Sbjct: 791 SLTNSSFTNMSQLTTLILSYNALRCIPTLAFSGLRSLRLLSLH 833
Score = 46 (21.3 bits), Expect = 8.3e-11, Sum P(3) = 8.3e-11
Identities = 18/87 (20%), Positives = 37/87 (42%)
Query: 337 GTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFVDNIQLETVIIN 396
G + L L GN +++ F L +L+L+ +N + + F D L + +
Sbjct: 348 GLRSLNSLVLYGNKITDLPRGVFDGLHALQLLLLNA-NKIHCLRANTFQDLQNLSLLSLY 406
Query: 397 ENMNLKQLPSKLFQGNTNLKSVSLKGN 423
+N ++ L F ++++ L N
Sbjct: 407 DN-KIQTLAKGTFSSLRAIQTLHLAQN 432
Score = 45 (20.9 bits), Expect = 2.3e-21, Sum P(4) = 2.3e-21
Identities = 11/34 (32%), Positives = 20/34 (58%)
Query: 269 LSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
L +L +L L GN +++ F L +L+L+ +N
Sbjct: 349 LRSLNSLVLYGNKITDLPRGVFDGLHALQLLLLN 382
Score = 44 (20.5 bits), Expect = 2.9e-21, Sum P(4) = 2.9e-21
Identities = 14/41 (34%), Positives = 23/41 (56%)
Query: 269 LSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LD 308
L+ L ++LS N S I+ AF+ S+ +++L N LD
Sbjct: 557 LTHLKKINLSNNKISEIEDGAFEGASSVN--ELHLTANQLD 595
Score = 43 (20.2 bits), Expect = 1.7e-10, Sum P(3) = 1.7e-10
Identities = 10/35 (28%), Positives = 19/35 (54%)
Query: 472 TTVAYEMTSNTSISPGTTTEAQRVDRIIKNNHSLT 506
T + E S SI PG + +++ RI +N+ ++
Sbjct: 305 TEIRLEQNSIKSIPPGAFSPYKKLRRIDLSNNQIS 339
Score = 38 (18.4 bits), Expect = 9.3e-11, Sum P(2) = 9.3e-11
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 263 TKQLSKLSALVNLDLSGNNFSNIDS 287
T +L +VNL + G + + +DS
Sbjct: 1238 TVELVTFDQMVNLSIDGGSPTTMDS 1262
Score = 37 (18.1 bits), Expect = 2.3e-21, Sum P(4) = 2.3e-21
Identities = 6/24 (25%), Positives = 12/24 (50%)
Query: 513 KCSSPPDIKGLEVKAVPENSVHCE 536
+C+SP ++G + P C+
Sbjct: 885 RCASPHGMEGKLLLTTPAKRFECQ 908
Score = 37 (18.1 bits), Expect = 4.8e-11, Sum P(4) = 4.8e-11
Identities = 8/28 (28%), Positives = 16/28 (57%)
Query: 275 LDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
L L+ NN S+I +F + L+ +++
Sbjct: 179 LTLNNNNISSIPVSSFNHMPKLRTFRLH 206
>FB|FBgn0264089 [details] [associations]
symbol:sli "slit" species:7227 "Drosophila melanogaster"
[GO:0031012 "extracellular matrix" evidence=IDA] [GO:0008347 "glial
cell migration" evidence=IMP] [GO:0050919 "negative chemotaxis"
evidence=IMP] [GO:0007509 "mesoderm migration involved in
gastrulation" evidence=IMP] [GO:0005578 "proteinaceous
extracellular matrix" evidence=TAS] [GO:0008078 "mesodermal cell
migration" evidence=IMP] [GO:0007411 "axon guidance"
evidence=IGI;IMP;IPI] [GO:0035385 "Roundabout signaling pathway"
evidence=IGI] [GO:0030182 "neuron differentiation" evidence=IMP]
[GO:0010632 "regulation of epithelial cell migration" evidence=IMP]
[GO:2000274 "regulation of epithelial cell migration, open tracheal
system" evidence=IMP] [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0007427 "epithelial cell migration, open tracheal
system" evidence=IMP] [GO:0016199 "axon midline choice point
recognition" evidence=IMP] [GO:0001764 "neuron migration"
evidence=IMP] [GO:0007432 "salivary gland boundary specification"
evidence=IMP] [GO:0035050 "embryonic heart tube development"
evidence=IMP] [GO:0022409 "positive regulation of cell-cell
adhesion" evidence=IMP] [GO:0071666 "Slit-Robo signaling complex"
evidence=IDA] [GO:0048495 "Roundabout binding" evidence=IPI]
[GO:0008201 "heparin binding" evidence=IDA] [GO:0003151 "outflow
tract morphogenesis" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0008406 "gonad development" evidence=IMP] [GO:0007502
"digestive tract mesoderm development" evidence=IMP] [GO:0046331
"lateral inhibition" evidence=IMP] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 EMBL:AE013599
GO:GO:0005886 GO:GO:0001764 GO:GO:0008406 GO:GO:0005578
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0016199 GO:GO:0008201 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
Reactome:REACT_113552 GO:GO:0048813 PROSITE:PS01186 GO:GO:0046331
InterPro:IPR001791 Pfam:PF00054 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 GO:GO:0007427 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0003151 GO:GO:0008078 GO:GO:0008347
GO:GO:0007432 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 GO:GO:0022409 InterPro:IPR026906 Pfam:PF13306
GO:GO:2000274 GO:GO:0035050 Pfam:PF01463 GO:GO:0007502
GeneTree:ENSGT00700000104083 GO:GO:0035385 KO:K06839 GO:GO:0050929
EMBL:X53959 EMBL:AF126540 EMBL:M23543 PIR:A36665 PIR:B36665
RefSeq:NP_001097333.1 RefSeq:NP_001097334.1 RefSeq:NP_476727.1
RefSeq:NP_476728.1 RefSeq:NP_476729.1 UniGene:Dm.4729 PDB:1W8A
PDBsum:1W8A ProteinModelPortal:P24014 SMR:P24014 STRING:P24014
PaxDb:P24014 EnsemblMetazoa:FBtr0330731 EnsemblMetazoa:FBtr0330733
GeneID:36746 KEGG:dme:Dmel_CG8355 CTD:36746 FlyBase:FBgn0003425
InParanoid:P24014 OMA:RHKMFKG OrthoDB:EOG46DJHK PhylomeDB:P24014
EvolutionaryTrace:P24014 GenomeRNAi:36746 NextBio:800151
Bgee:P24014 GermOnline:CG8355 GO:GO:0071666 Uniprot:P24014
Length = 1504
Score = 209 (78.6 bits), Expect = 3.5e-21, Sum P(4) = 3.5e-21
Identities = 55/192 (28%), Positives = 95/192 (49%)
Query: 17 LNKAICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYT-LSFYIE 75
+ +A CP C C L C+ GL VP +++ +V+ + L+ N ++ ++ T +
Sbjct: 68 ITEARCPRVCSCTG--LNVDCSHRGLTSVPRKISADVERLELQGNNLTVIYETDFQRLTK 125
Query: 76 LRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKIS 135
LR L L+ N+I+ + ++F+ L L ++ N + A+ ++ L LD+S N I+
Sbjct: 126 LRMLQLTDNQIHTIERNSFQDLVSLERLRLNNNRLKAIPENFVTSSASLLRLDISNNVIT 185
Query: 136 VINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLP 195
+ + F+ L L L N IT D F L L IL L+NN + +P+N+ L
Sbjct: 186 TVGRRVFKGAQSLRSLQLDNNQITCL-DEHAFKGLVELEILTLNNNNLTSLPHNIFGGLG 244
Query: 196 HQSLHYLYLNEN 207
L L L++N
Sbjct: 245 R--LRALRLSDN 254
Score = 193 (73.0 bits), Expect = 3.5e-17, Sum P(4) = 3.5e-17
Identities = 58/179 (32%), Positives = 89/179 (49%)
Query: 22 CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVH-YTLSFYIELRSLD 80
CP C+C D ++ C + L VP+ L + + L +N I+ + + S + LR +D
Sbjct: 319 CPHPCRCADGIVD--CREKSLTSVPVTLPDDTTELRLEQNFITELPPKSFSSFRRLRRID 376
Query: 81 LSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKT 140
LS N I+ + +L L + N+I L FKGL L+ L L+ N+IS I K
Sbjct: 377 LSNNNISRIAHDALSGLKQLTTLVLYGNKIKDLPSGVFKGLGSLQLLLLNANEISCIRKD 436
Query: 141 AFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQ-ILDVPNNVLSNLPHQS 198
AFRD L LL L NNI + F ++KS++ + L N I D L++ H++
Sbjct: 437 AFRDLHSLSLLSLYDNNIQSLANGT-FDAMKSIKTVHLAKNPFICDCNLRWLADYLHKN 494
Score = 182 (69.1 bits), Expect = 2.8e-08, Sum P(3) = 2.8e-08
Identities = 44/141 (31%), Positives = 67/141 (47%)
Query: 17 LNKAICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSFYIE- 75
L CP C C + C+ L+ +P + E + L N I +HY ++
Sbjct: 734 LGDGYCPPSCTCTGTVVR--CSRNQLKEIPRGIPAETSELYLESNEIEQIHYERIRHLRS 791
Query: 76 LRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKIS 135
L LDLS N+I +L ++ F KL L ISYN++ L + GL L+ L L N+IS
Sbjct: 792 LTRLDLSNNQITILSNYTFANLTKLSTLIISYNKLQCLQRHALSGLNNLRVLSLHGNRIS 851
Query: 136 VINKTAFRDTLHLELLILSFN 156
++ + +F D L + L N
Sbjct: 852 MLPEGSFEDLKSLTHIALGSN 872
Score = 148 (57.2 bits), Expect = 2.9e-12, Sum P(4) = 2.9e-12
Identities = 41/143 (28%), Positives = 72/143 (50%)
Query: 75 ELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKI 134
++ L+L N + V+ +F+ KL L ++ N+I + +++F+ L L+ L L+ N++
Sbjct: 101 DVERLELQGNNLTVIYETDFQRLTKLRMLQLTDNQIHTIERNSFQDLVSLERLRLNNNRL 160
Query: 135 SVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNL 194
I + + L L +S NN+ +F +SLR L+LDNNQI + + L
Sbjct: 161 KAIPENFVTSSASLLRLDIS-NNVITTVGRRVFKGAQSLRSLQLDNNQITCLDEHAFKGL 219
Query: 195 PHQSLHYLYLNENLIETVLDNSF 217
L L LN N + ++ N F
Sbjct: 220 VE--LEILTLNNNNLTSLPHNIF 240
Score = 140 (54.3 bits), Expect = 9.8e-12, Sum P(3) = 9.8e-12
Identities = 38/137 (27%), Positives = 64/137 (46%)
Query: 22 CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSF--YIELRSL 79
CP+ C C + CT GL+ +P + ++L +N + + F L L
Sbjct: 543 CPAMCHC--EGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKL 600
Query: 80 DLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINK 139
+L N++ + + FE + + L + N+I +S F GL +LKTL+L N+IS +
Sbjct: 601 ELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMP 660
Query: 140 TAFRDTLHLELLILSFN 156
+F L L L+ N
Sbjct: 661 GSFEHLNSLTSLNLASN 677
Score = 126 (49.4 bits), Expect = 6.4e-10, Sum P(4) = 6.4e-10
Identities = 39/127 (30%), Positives = 64/127 (50%)
Query: 103 LNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFE 162
L + N ++ + + F+ L +L+ L L+ N+I I + +F+D + LE L L+ N +
Sbjct: 105 LELQGNNLTVIYETDFQRLTKLRMLQLTDNQIHTIERNSFQDLVSLERLRLNNNRLKAIP 164
Query: 163 DSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLT 222
++ + SS LR L + NN I V V QSL L L+ N I + +++F L
Sbjct: 165 ENFVTSSASLLR-LDISNNVITTVGRRVFKGA--QSLRSLQLDNNQITCLDEHAFK-GLV 220
Query: 223 NLHTLAL 229
L L L
Sbjct: 221 ELEILTL 227
Score = 119 (46.9 bits), Expect = 2.3e-20, Sum P(4) = 2.3e-20
Identities = 32/104 (30%), Positives = 57/104 (54%)
Query: 352 SNIDSVAFKSLFSLK-LVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNLKQLPSKLF 409
+ I+ + ++ + L+ L +++L N + + F + +L T+II+ N L+ L
Sbjct: 776 NEIEQIHYERIRHLRSLTRLDLSNNQITILSNYTFANLTKLSTLIISYN-KLQCLQRHAL 834
Query: 410 QGNTNLKSVSLKGNSLSHL-EASHFPLERISFLDLSDNPLHCDC 452
G NL+ +SL GN +S L E S L+ ++ + L NPL+CDC
Sbjct: 835 SGLNNLRVLSLHGNRISMLPEGSFEDLKSLTHIALGSNPLYCDC 878
Score = 118 (46.6 bits), Expect = 4.4e-09, Sum P(4) = 4.4e-09
Identities = 39/127 (30%), Positives = 64/127 (50%)
Query: 103 LNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFE 162
L + N I+ L +F + L+ +DLS N IS I A L L+L N I
Sbjct: 351 LRLEQNFITELPPKSFSSFRRLRRIDLSNNNISRIAHDALSGLKQLTTLVLYGNKIKDLP 410
Query: 163 DSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLT 222
S +F L SL++L L+ N+I + + +L H SL L L +N I+++ + +F +
Sbjct: 411 -SGVFKGLGSLQLLLLNANEISCIRKDAFRDL-H-SLSLLSLYDNNIQSLANGTFD-AMK 466
Query: 223 NLHTLAL 229
++ T+ L
Sbjct: 467 SIKTVHL 473
Score = 114 (45.2 bits), Expect = 3.5e-21, Sum P(4) = 3.5e-21
Identities = 31/108 (28%), Positives = 58/108 (53%)
Query: 350 NFSNIDSVAFKSLFSL--KLVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNLKQLPS 406
N + + ++ LF LVK+ L N L I+ AF ++ + + EN +K++ +
Sbjct: 578 NDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGEN-KIKEISN 636
Query: 407 KLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPLHCDCN 453
K+F G LK+++L N +S + F L ++ L+L+ NP +C+C+
Sbjct: 637 KMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 684
Score = 99 (39.9 bits), Expect = 1.5e-18, Sum P(3) = 1.5e-18
Identities = 34/114 (29%), Positives = 54/114 (47%)
Query: 343 RLDLSGNNFSNIDSVAFKSLFSLK-LVKINLIPN-LDSIDQRAFVDNIQLETVIINENMN 400
R+DLS NN S I A +L LK L + L N + + F L+ +++N N
Sbjct: 374 RIDLSNNNISRI---AHDALSGLKQLTTLVLYGNKIKDLPSGVFKGLGSLQLLLLNAN-E 429
Query: 401 LKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPLHCDCN 453
+ + F+ +L +SL N++ L F ++ I + L+ NP CDCN
Sbjct: 430 ISCIRKDAFRDLHSLSLLSLYDNNIQSLANGTFDAMKSIKTVHLAKNPFICDCN 483
Score = 99 (39.9 bits), Expect = 2.9e-08, Sum P(3) = 2.9e-08
Identities = 56/234 (23%), Positives = 90/234 (38%)
Query: 76 LRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKIS 135
LRSL L N+I L H F+ +L L ++ N +++L + F GL L+ L LS N +
Sbjct: 198 LRSLQLDNNQITCLDEHAFKGLVELEILTLNNNNLTSLPHNIFGGLGRLRALRLSDNPFA 257
Query: 136 VINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQI----LDVPNNVL 191
++ L + S + + + S LK + L + + L +
Sbjct: 258 CDCHLSW-----LSRFLRSATRLAPYTRCQSPSQLKGQNVADLHDQEFKCSGLTEHAPME 312
Query: 192 SNLPHQSLHYLYLNENLIETVLDN--SFPFTLTNLHT-LALXXXXXXXXXXXXXVTLRTL 248
+ H + +++ + S P TL + T L L + R L
Sbjct: 313 CGAENSCPHPCRCADGIVDCREKSLTSVPVTLPDDTTELRLEQNFITELPPKSFSSFRRL 372
Query: 249 HXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
I LS L L L L GN ++ S FK L SL+L+ +N
Sbjct: 373 RRIDLSNNNISRIAHDALSGLKQLTTLVLYGNKIKDLPSGVFKGLGSLQLLLLN 426
Score = 92 (37.4 bits), Expect = 8.0e-18, Sum P(3) = 8.0e-18
Identities = 37/126 (29%), Positives = 59/126 (46%)
Query: 332 SLTPLG-TLKCD--RLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFVDNI 388
SLT + TL D L L N + + +F S L+ + ++ N+ I A
Sbjct: 336 SLTSVPVTLPDDTTELRLEQNFITELPPKSFSSFRRLRRIDLSN-NNISRIAHDALSGLK 394
Query: 389 QLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHF-PLERISFLDLSDNP 447
QL T+++ N +K LPS +F+G +L+ + L N +S + F L +S L L DN
Sbjct: 395 QLTTLVLYGN-KIKDLPSGVFKGLGSLQLLLLNANEISCIRKDAFRDLHSLSLLSLYDNN 453
Query: 448 LHCDCN 453
+ N
Sbjct: 454 IQSLAN 459
Score = 85 (35.0 bits), Expect = 4.3e-06, Sum P(3) = 4.3e-06
Identities = 28/102 (27%), Positives = 46/102 (45%)
Query: 81 LSVNKINVLGSHN-FEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINK 139
L+ N++ + S F L+ L + N+++ + + F+G ++ L L NKI I+
Sbjct: 577 LNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISN 636
Query: 140 TAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNN 181
F L+ L L N I+ F L SL L L +N
Sbjct: 637 KMFLGLHQLKTLNLYDNQISCVMPGS-FEHLNSLTSLNLASN 677
Score = 77 (32.2 bits), Expect = 2.7e-05, Sum P(3) = 2.7e-05
Identities = 27/88 (30%), Positives = 38/88 (43%)
Query: 143 RDT-LHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHY 201
RD LH L+L+ N + +F L L L+L NQ+ + N H +
Sbjct: 566 RDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASH--IQE 623
Query: 202 LYLNENLIETVLDNSFPFTLTNLHTLAL 229
L L EN I+ + + F L L TL L
Sbjct: 624 LQLGENKIKEISNKMF-LGLHQLKTLNL 650
Score = 75 (31.5 bits), Expect = 7.2e-06, Sum P(3) = 7.2e-06
Identities = 32/135 (23%), Positives = 51/135 (37%)
Query: 176 LKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXX 235
L+L N + + L L L L +N I T+ NSF L +L L L
Sbjct: 105 LELQGNNLTVIYETDFQRLT--KLRMLQLTDNQIHTIERNSFQ-DLVSLERLRLNNNRLK 161
Query: 236 XXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFS 295
+ +L + + +L +L L N + +D AFK L
Sbjct: 162 AIPENFVTSSASLLRLDISNNVITTVGRRVFKGAQSLRSLQLDNNQITCLDEHAFKGLVE 221
Query: 296 LKLVKINLIPNLDSI 310
L+++ +N NL S+
Sbjct: 222 LEILTLNN-NNLTSL 235
Score = 71 (30.1 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 30/130 (23%), Positives = 53/130 (40%)
Query: 184 LDVPNNVLSNLPHQ---SLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXX 240
+D + L+++P + + L L N + + + F LT L L L
Sbjct: 84 VDCSHRGLTSVPRKISADVERLELQGNNLTVIYETDFQ-RLTKLRMLQLTDNQIHTIERN 142
Query: 241 XXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVK 300
L +L AIP ++ ++L+ LD+S N + + FK SL+ ++
Sbjct: 143 SFQDLVSLERLRLNNNRLKAIPENFVTSSASLLRLDISNNVITTVGRRVFKGAQSLRSLQ 202
Query: 301 I--NLIPNLD 308
+ N I LD
Sbjct: 203 LDNNQITCLD 212
Score = 63 (27.2 bits), Expect = 9.9e-15, Sum P(4) = 9.9e-15
Identities = 21/83 (25%), Positives = 37/83 (44%)
Query: 343 RLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFVDNIQLETVIINENMNLK 402
RLDLS N + + + F +L L + I+ L + + A L + ++ N +
Sbjct: 794 RLDLSNNQITILSNYTFANLTKLSTLIISY-NKLQCLQRHALSGLNNLRVLSLHGN-RIS 851
Query: 403 QLPSKLFQGNTNLKSVSLKGNSL 425
LP F+ +L ++L N L
Sbjct: 852 MLPEGSFEDLKSLTHIALGSNPL 874
Score = 61 (26.5 bits), Expect = 1.6e-15, Sum P(4) = 1.6e-15
Identities = 34/133 (25%), Positives = 53/133 (39%)
Query: 261 IPTKQLSKLSALVNLDLSGNNFSNI--DSVA-FKSLFSLKLV--KINLIPN--LDSIDQX 313
+P K S L +DLS NN S I D+++ K L +L L KI +P+ +
Sbjct: 361 LPPKSFSSFRRLRRIDLSNNNISRIAHDALSGLKQLTTLVLYGNKIKDLPSGVFKGLGSL 420
Query: 314 XXXXXXXXXXXXXXXXAFSLTPLGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLI 373
AF L +L L L NN ++ + F ++ S+K V +
Sbjct: 421 QLLLLNANEISCIRKDAFR--DLHSLSL--LSLYDNNIQSLANGTFDAMKSIKTVHLAKN 476
Query: 374 PNLDSIDQRAFVD 386
P + + R D
Sbjct: 477 PFICDCNLRWLAD 489
Score = 57 (25.1 bits), Expect = 0.00043, Sum P(3) = 0.00043
Identities = 28/126 (22%), Positives = 48/126 (38%)
Query: 176 LKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXX 235
L+L+ N I ++P S+ + L + L+ N I + ++ L L TL L
Sbjct: 351 LRLEQNFITELPPKSFSSF--RRLRRIDLSNNNISRIAHDALS-GLKQLTTLVLYGNKIK 407
Query: 236 XXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFS 295
L +L I L +L L L NN ++ + F ++ S
Sbjct: 408 DLPSGVFKGLGSLQLLLLNANEISCIRKDAFRDLHSLSLLSLYDNNIQSLANGTFDAMKS 467
Query: 296 LKLVKI 301
+K V +
Sbjct: 468 IKTVHL 473
Score = 53 (23.7 bits), Expect = 3.5e-21, Sum P(4) = 3.5e-21
Identities = 26/108 (24%), Positives = 39/108 (36%)
Query: 194 LPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXX 253
LP + L L +N I + SF + L + L L+ L
Sbjct: 344 LPDDTTE-LRLEQNFITELPPKSFS-SFRRLRRIDLSNNNISRIAHDALSGLKQLTTLVL 401
Query: 254 XXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKI 301
+P+ L +L L L+ N S I AF+ L SL L+ +
Sbjct: 402 YGNKIKDLPSGVFKGLGSLQLLLLNANEISCIRKDAFRDLHSLSLLSL 449
Score = 50 (22.7 bits), Expect = 3.5e-21, Sum P(4) = 3.5e-21
Identities = 6/25 (24%), Positives = 15/25 (60%)
Query: 513 KCSSPPDIKGLEVKAVPENSVHCES 537
+C +P ++ +++K +P + C S
Sbjct: 703 RCGAPSKVRDVQIKDLPHSEFKCSS 727
Score = 50 (22.7 bits), Expect = 1.6e-15, Sum P(4) = 1.6e-15
Identities = 20/66 (30%), Positives = 34/66 (51%)
Query: 387 NIQLET--VIINENMNLKQLPSK-LFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLD 442
+I L T +++N+N L ++ S LF +L + LK N L+ +E + F I L
Sbjct: 567 DIPLHTTELLLNDN-ELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQ 625
Query: 443 LSDNPL 448
L +N +
Sbjct: 626 LGENKI 631
Score = 50 (22.7 bits), Expect = 5.9e-07, Sum P(3) = 5.9e-07
Identities = 40/201 (19%), Positives = 84/201 (41%)
Query: 337 GTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSID-QRAFVDNIQLETVII 395
G ++ + L L+ NN +++ F L L+ ++++ N + D +++ L +
Sbjct: 218 GLVELEILTLNNNNLTSLPHNIFGGLGRLRALRLS--DNPFACDCHLSWLSRF-LRSATR 274
Query: 396 NENMNLKQLPSKLFQGNT-NLKSVSLKGNSLSHLEASHFPLERISFLDLSDNPLHCDCNX 454
Q PS+L N +L K + L+ H P+E + +P C
Sbjct: 275 LAPYTRCQSPSQLKGQNVADLHDQEFKCSGLTE----HAPME-CGAENSCPHPCRCADGI 329
Query: 455 XXXXXXXXXXXKSTM--ETTTVAYEMTSNTSISPGTTTEAQRVDRIIKNNHSLTIV---- 508
T+ +TT + E T + P + + +R+ RI +N++++ +
Sbjct: 330 VDCREKSLTSVPVTLPDDTTELRLEQNFITELPPKSFSSFRRLRRIDLSNNNISRIAHDA 389
Query: 509 LNNLKCSSPPDIKGLEVKAVP 529
L+ LK + + G ++K +P
Sbjct: 390 LSGLKQLTTLVLYGNKIKDLP 410
Score = 47 (21.6 bits), Expect = 3.9e-13, Sum P(4) = 3.9e-13
Identities = 18/62 (29%), Positives = 29/62 (46%)
Query: 332 SLTPLGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFVDNIQLE 391
+L+ L L+ L L GN S + +F+ L SL + + P + F D I+L+
Sbjct: 833 ALSGLNNLRV--LSLHGNRISMLPEGSFEDLKSLTHIALGSNPLYCDCGLKWFSDWIKLD 890
Query: 392 TV 393
V
Sbjct: 891 YV 892
Score = 46 (21.3 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 40/177 (22%), Positives = 69/177 (38%)
Query: 360 KSLFSLK-LVKINLIPNLDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSV 418
KS S + L +I+L N S + ++ T ++ +K LPS +F+G +L+ +
Sbjct: 364 KSFSSFRRLRRIDLSNNNISRIAHDALSGLKQLTTLVLYGNKIKDLPSGVFKGLGSLQLL 423
Query: 419 SLKGNSLSHLEASHFPLERISFLDLSDNPLHCDCNXXXXXXXXXXXXKSTMETTTVAYEM 478
L N +S + F + L L L+ D N KS ++T +A
Sbjct: 424 LLNANEISCIRKDAF--RDLHSLSLLS--LY-DNNIQSLANGTFDAMKS-IKTVHLA--- 474
Query: 479 TSNTSISPGTTTEAQRVDRIIKNNHSLTIVLNNLKCSSPPDIKGLEVKAVPENSVHC 535
N I D + KN I + +C SP + ++++ E C
Sbjct: 475 -KNPFICDCNLRWL--ADYLHKN----PIETSGARCESPKRMHRRRIESLREEKFKC 524
Score = 43 (20.2 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 8/27 (29%), Positives = 12/27 (44%)
Query: 513 KCSSPPDIKGLEVKAVPENSVHCESNT 539
+C SP +KG V + + C T
Sbjct: 280 RCQSPSQLKGQNVADLHDQEFKCSGLT 306
Score = 40 (19.1 bits), Expect = 2.8e-08, Sum P(3) = 2.8e-08
Identities = 8/16 (50%), Positives = 9/16 (56%)
Query: 13 ALTKLNKAICPSRCQC 28
+LT LN A P C C
Sbjct: 668 SLTSLNLASNPFNCNC 683
Score = 39 (18.8 bits), Expect = 5.9e-19, Sum P(4) = 5.9e-19
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 268 KLSALVNLDLSGNNFSNIDSVAFK 291
+L LV L+L N + I+ AF+
Sbjct: 593 RLPHLVKLELKRNQLTGIEPNAFE 616
Score = 37 (18.1 bits), Expect = 2.3e-20, Sum P(4) = 2.3e-20
Identities = 6/23 (26%), Positives = 12/23 (52%)
Query: 513 KCSSPPDIKGLEVKAVPENSVHC 535
+C+ P +K + + P +S C
Sbjct: 898 RCAEPEQMKDKLILSTPSSSFVC 920
>UNIPROTKB|F1S8Z0 [details] [associations]
symbol:SLIT1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050919 "negative chemotaxis" evidence=IEA] [GO:0048846
"axon extension involved in axon guidance" evidence=IEA]
[GO:0048495 "Roundabout binding" evidence=IEA] [GO:0040023
"establishment of nucleus localization" evidence=IEA] [GO:0033563
"dorsal/ventral axon guidance" evidence=IEA] [GO:0031290 "retinal
ganglion cell axon guidance" evidence=IEA] [GO:0022028 "tangential
migration from the subventricular zone to the olfactory bulb"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 GO:GO:0005737 GO:GO:0005615 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0008045
PROSITE:PS01186 InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274
SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 InterPro:IPR025875
Pfam:PF12799 GO:GO:0031290 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
Pfam:PF12661 GO:GO:0033563 Pfam:PF01463
GeneTree:ENSGT00700000104083 GO:GO:0022028 GO:GO:0050919
OMA:KCVHGKC EMBL:FP340446 ProteinModelPortal:F1S8Z0
Ensembl:ENSSSCT00000011502 Uniprot:F1S8Z0
Length = 1397
Score = 183 (69.5 bits), Expect = 1.8e-20, Sum P(4) = 1.8e-20
Identities = 56/170 (32%), Positives = 87/170 (51%)
Query: 17 LNKAICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRE-NRISNVHY-TLSFYI 74
L+ CP+ C C + ++ C GL +P L PE T I E N I ++ S Y
Sbjct: 141 LSSGSCPAMCACSNGIVD--CRGKGLTAIPANL-PETMTEIRLELNGIKSIPPGAFSPYR 197
Query: 75 ELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKI 134
+LR +DLS N+I+ + F+ L +L + N+I+ L + F GL L+ L L+ NKI
Sbjct: 198 KLRRIDLSNNQISEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLFTLQLLLLNANKI 257
Query: 135 SVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQIL 184
+ + AF+D +L LL L N I F+SL++++ L L N +
Sbjct: 258 NCVRPDAFQDLQNLSLLSLYDNKIQGLAKGT-FTSLRAIQTLHLAQNPFI 306
Score = 169 (64.5 bits), Expect = 9.8e-09, Sum P(2) = 9.8e-09
Identities = 42/135 (31%), Positives = 67/135 (49%)
Query: 22 CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSFYIELRSLDL 81
CP C C D + C++ L+ +P + V + L N+ V LS + L+ +DL
Sbjct: 597 CPQECACLDTVVR--CSNKHLQALPKGIPKNVTELYLDGNQFMLVPGQLSTFKYLQLVDL 654
Query: 82 SVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTA 141
S NKI+ L + +F ++L L +SYN + + F+GL+ L+ L L N IS + +
Sbjct: 655 SNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLHGNDISTLQEGI 714
Query: 142 FRDTLHLELLILSFN 156
F D L L + N
Sbjct: 715 FADVTSLSHLAIGAN 729
Score = 165 (63.1 bits), Expect = 3.4e-17, Sum P(3) = 3.4e-17
Identities = 45/160 (28%), Positives = 79/160 (49%)
Query: 21 ICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSF--YIELRS 78
+CP +C+C +E C+ L +P ++ + L N IS + T F L+
Sbjct: 375 VCPHKCRCEASVVE--CSSLKLSKIPERIPQATAELRLNNNEISILEATGMFKKLTHLKK 432
Query: 79 LDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVIN 138
++LS NK++ + FE + L+++ N++ ++ F+GL L+TL L N+IS I+
Sbjct: 433 INLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIH 492
Query: 139 KTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKL 178
+F ++ LL L N I F +L++L L L
Sbjct: 493 NDSFTGLRNVRLLSLYDNQIATISPGA-FDTLQALSTLNL 531
Score = 140 (54.3 bits), Expect = 1.7e-14, Sum P(3) = 1.7e-14
Identities = 47/128 (36%), Positives = 65/128 (50%)
Query: 103 LNISYNEISAL-SKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYF 161
L ++ NEIS L + FK L LK ++LS NK+S I AF + L L+ N +
Sbjct: 408 LRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESI 467
Query: 162 EDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTL 221
S +F L LR L L NN+I + N+ + L + L LY +N I T+ +F TL
Sbjct: 468 R-SGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLY--DNQIATISPGAFD-TL 523
Query: 222 TNLHTLAL 229
L TL L
Sbjct: 524 QALSTLNL 531
Score = 132 (51.5 bits), Expect = 1.8e-20, Sum P(4) = 1.8e-20
Identities = 41/122 (33%), Positives = 64/122 (52%)
Query: 335 PLGTLK-CDRLDLSGNNFSNIDSVAFKSLFS-LKLVKINLIPNLDSIDQRAFVDNIQLET 392
P G K L L GN F + S F L+LV ++ + S+ +F + QL T
Sbjct: 619 PKGIPKNVTELYLDGNQFMLVPGQL--STFKYLQLVDLSN-NKISSLSNSSFTNMSQLTT 675
Query: 393 VIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPLHCD 451
+I++ N L+ +P FQG +L+ +SL GN +S L+ F + +S L + NPL+CD
Sbjct: 676 LILSYNA-LQCIPPLAFQGLRSLRLLSLHGNDISTLQEGIFADVTSLSHLAIGANPLYCD 734
Query: 452 CN 453
C+
Sbjct: 735 CH 736
Score = 128 (50.1 bits), Expect = 3.3e-13, Sum P(3) = 3.3e-13
Identities = 47/180 (26%), Positives = 82/180 (45%)
Query: 30 DQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTL-SFYIELRSLDLSVNKINV 88
D +L + C V P + E + ++S + + ELR L+ N+I++
Sbjct: 363 DYQLNSECNSD--VVCPHKCRCEASVVECSSLKLSKIPERIPQATAELR---LNNNEISI 417
Query: 89 LGSHN-FEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLH 147
L + F+ L +N+S N++S + F+G + L L+ N++ I FR
Sbjct: 418 LEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMFRGLDG 477
Query: 148 LELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNEN 207
L L+L N I+ + F+ L+++R+L L +NQI + L Q+L L L N
Sbjct: 478 LRTLMLRNNRISCIHNDS-FTGLRNVRLLSLYDNQIATISPGAFDTL--QALSTLNLLAN 534
Score = 124 (48.7 bits), Expect = 4.5e-14, Sum P(4) = 4.5e-14
Identities = 30/80 (37%), Positives = 46/80 (57%)
Query: 104 NISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFED 163
++S N I A+ + F+G +LK L L N+IS I + AFR LE+L L+ NNI+
Sbjct: 3 DLSENTIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNISTIPV 62
Query: 164 SEIFSSLKSLRILKLDNNQI 183
S F+ + LR +L +N +
Sbjct: 63 SS-FNHMPKLRTFRLHSNHL 81
Score = 118 (46.6 bits), Expect = 2.4e-11, Sum P(3) = 2.4e-11
Identities = 38/116 (32%), Positives = 53/116 (45%)
Query: 340 KCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINEN 398
K R+DLS N S I AF+ L SL + L N + + + F L+ +++N N
Sbjct: 198 KLRRIDLSNNQISEIAPDAFQGLRSLN--SLVLYGNKITDLPRGVFGGLFTLQLLLLNAN 255
Query: 399 MNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPLHCDCN 453
+ + FQ NL +SL N + L F L I L L+ NP CDCN
Sbjct: 256 -KINCVRPDAFQDLQNLSLLSLYDNKIQGLAKGTFTSLRAIQTLHLAQNPFICDCN 310
Score = 109 (43.4 bits), Expect = 8.1e-17, Sum P(3) = 8.1e-17
Identities = 32/112 (28%), Positives = 59/112 (52%)
Query: 343 RLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNL 401
+++LS N S I+ AF+ S+ +++L N L+SI F L T+++ N +
Sbjct: 432 KINLSNNKVSEIEDGAFEGAASVS--ELHLTANQLESIRSGMFRGLDGLRTLMLRNN-RI 488
Query: 402 KQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPLHCDC 452
+ + F G N++ +SL N ++ + F L+ +S L+L NP +C+C
Sbjct: 489 SCIHNDSFTGLRNVRLLSLYDNQIATISPGAFDTLQALSTLNLLANPFNCNC 540
Score = 108 (43.1 bits), Expect = 0.00046, Sum P(3) = 0.00046
Identities = 29/86 (33%), Positives = 47/86 (54%)
Query: 122 KELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNN 181
K L+ +DLS NKIS ++ ++F + L LILS+N + F L+SLR+L L N
Sbjct: 647 KYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLA-FQGLRSLRLLSLHGN 705
Query: 182 QILDVPNNVLSNLPHQSLHYLYLNEN 207
I + + +++ SL +L + N
Sbjct: 706 DISTLQEGIFADVT--SLSHLAIGAN 729
Score = 105 (42.0 bits), Expect = 3.5e-12, Sum P(4) = 3.5e-12
Identities = 27/78 (34%), Positives = 41/78 (52%)
Query: 128 DLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVP 187
DLS N I I + AFR L+ L L N I+ E+ F +L+ L +L L+NN I +P
Sbjct: 3 DLSENTIQAIPRKAFRGATDLKNLQLDKNQISCIEEGA-FRALRGLEVLTLNNNNISTIP 61
Query: 188 NNVLSNLPHQSLHYLYLN 205
+ +++P L+ N
Sbjct: 62 VSSFNHMPKLRTFRLHSN 79
Score = 101 (40.6 bits), Expect = 5.0e-14, Sum P(5) = 5.0e-14
Identities = 44/133 (33%), Positives = 56/133 (42%)
Query: 121 LKELKT-LDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLD 179
L E T + L N I I AF L + LS N I+ + F L+SL L L
Sbjct: 171 LPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQISEIAP-DAFQGLRSLNSLVLY 229
Query: 180 NNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXX 239
N+I D+P V L +L L LN N I V ++F L NL L+L
Sbjct: 230 GNKITDLPRGVFGGL--FTLQLLLLNANKINCVRPDAFQ-DLQNLSLLSLYDNKIQGLAK 286
Query: 240 XXXVTLR---TLH 249
+LR TLH
Sbjct: 287 GTFTSLRAIQTLH 299
Score = 101 (40.6 bits), Expect = 1.8e-10, Sum P(3) = 1.8e-10
Identities = 33/109 (30%), Positives = 53/109 (48%)
Query: 53 VQTIILRENRISNVHY-TLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEIS 111
++ I L N++S + + L L+ N++ + S F + L L + N IS
Sbjct: 430 LKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRIS 489
Query: 112 ALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLH----LELLILSFN 156
+ D+F GL+ ++ L L N+I+ I+ AF DTL L LL FN
Sbjct: 490 CIHNDSFTGLRNVRLLSLYDNQIATISPGAF-DTLQALSTLNLLANPFN 537
Score = 97 (39.2 bits), Expect = 2.2e-11, Sum P(4) = 2.2e-11
Identities = 25/79 (31%), Positives = 38/79 (48%)
Query: 80 DLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINK 139
DLS N I + F L NL + N+IS + + F+ L+ L+ L L+ N IS I
Sbjct: 3 DLSENTIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNISTIPV 62
Query: 140 TAFRDTLHLELLILSFNNI 158
++F L L N++
Sbjct: 63 SSFNHMPKLRTFRLHSNHL 81
Score = 65 (27.9 bits), Expect = 7.3e-07, Sum P(3) = 7.3e-07
Identities = 16/43 (37%), Positives = 24/43 (55%)
Query: 260 AIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
AIP K + L NL L N S I+ AF++L L+++ +N
Sbjct: 11 AIPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLN 53
Score = 62 (26.9 bits), Expect = 5.0e-14, Sum P(5) = 5.0e-14
Identities = 16/60 (26%), Positives = 30/60 (50%)
Query: 75 ELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKI 134
+L++L L N+I+ + F L L ++ N IS + +F + +L+T L N +
Sbjct: 22 DLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNISTIPVSSFNHMPKLRTFRLHSNHL 81
Score = 61 (26.5 bits), Expect = 7.7e-08, Sum P(4) = 7.7e-08
Identities = 25/77 (32%), Positives = 33/77 (42%)
Query: 153 LSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETV 212
LS N I + F L+ L+LD NQI + L + L L LN N I T+
Sbjct: 4 LSENTIQAIP-RKAFRGATDLKNLQLDKNQISCIEEGAFRAL--RGLEVLTLNNNNISTI 60
Query: 213 LDNSFPFTLTNLHTLAL 229
+SF + L T L
Sbjct: 61 PVSSFNH-MPKLRTFRL 76
Score = 58 (25.5 bits), Expect = 1.3e-11, Sum P(3) = 1.3e-11
Identities = 18/62 (29%), Positives = 34/62 (54%)
Query: 168 SSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTL 227
S+ K L+++ L NN+I + N+ +N+ L L L+ N ++ + +F L +L L
Sbjct: 644 STFKYLQLVDLSNNKISSLSNSSFTNM--SQLTTLILSYNALQCIPPLAFQ-GLRSLRLL 700
Query: 228 AL 229
+L
Sbjct: 701 SL 702
Score = 57 (25.1 bits), Expect = 1.6e-11, Sum P(3) = 1.6e-11
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 171 KSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLAL 229
K++ L LD NQ + VP LS + L + L+ N I ++ ++SF ++ L TL L
Sbjct: 624 KNVTELYLDGNQFMLVPGQ-LSTFKY--LQLVDLSNNKISSLSNSSFT-NMSQLTTLIL 678
Score = 55 (24.4 bits), Expect = 1.8e-20, Sum P(4) = 1.8e-20
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 263 TKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSI 310
T KL+ L ++LS N S I+ AF+ S+ +++L N L+SI
Sbjct: 421 TGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVS--ELHLTANQLESI 467
Score = 55 (24.4 bits), Expect = 3.1e-06, Sum P(4) = 3.1e-06
Identities = 20/87 (22%), Positives = 40/87 (45%)
Query: 337 GTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFVDNIQLETVIIN 396
G + L L GN +++ F LF+L+L+ +N ++ + AF D L + +
Sbjct: 219 GLRSLNSLVLYGNKITDLPRGVFGGLFTLQLLLLNA-NKINCVRPDAFQDLQNLSLLSLY 277
Query: 397 ENMNLKQLPSKLFQGNTNLKSVSLKGN 423
+N ++ L F ++++ L N
Sbjct: 278 DN-KIQGLAKGTFTSLRAIQTLHLAQN 303
Score = 53 (23.7 bits), Expect = 7.1e-14, Sum P(4) = 7.1e-14
Identities = 15/37 (40%), Positives = 18/37 (48%)
Query: 260 AIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSL 296
+IP S L +DLS N S I AF+ L SL
Sbjct: 187 SIPPGAFSPYRKLRRIDLSNNQISEIAPDAFQGLRSL 223
Score = 53 (23.7 bits), Expect = 4.0e-11, Sum P(3) = 4.0e-11
Identities = 15/59 (25%), Positives = 26/59 (44%)
Query: 244 TLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
T + L ++ + +S L L LS N I +AF+ L SL+L+ ++
Sbjct: 645 TFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLH 703
Score = 51 (23.0 bits), Expect = 1.1e-13, Sum P(4) = 1.1e-13
Identities = 12/34 (35%), Positives = 21/34 (61%)
Query: 269 LSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
L +L +L L GN +++ F LF+L+L+ +N
Sbjct: 220 LRSLNSLVLYGNKITDLPRGVFGGLFTLQLLLLN 253
Score = 51 (23.0 bits), Expect = 2.5e-12, Sum P(4) = 2.5e-12
Identities = 15/59 (25%), Positives = 29/59 (49%)
Query: 390 LETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFPLERISFLDLSDNPL 448
L+TV+ N +L+ LP + + N+ + L GN + + + +DLS+N +
Sbjct: 604 LDTVVRCSNKHLQALPKGIPK---NVTELYLDGNQFMLVPGQLSTFKYLQLVDLSNNKI 659
Score = 50 (22.7 bits), Expect = 1.8e-20, Sum P(4) = 1.8e-20
Identities = 7/24 (29%), Positives = 13/24 (54%)
Query: 513 KCSSPPDIKGLEVKAVPENSVHCE 536
+C+ PPD++G + P C+
Sbjct: 755 RCAGPPDMEGKLLLTTPAKKFECQ 778
Score = 48 (22.0 bits), Expect = 0.00098, Sum P(2) = 0.00098
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 513 KCSSPPDIKGLEVKAVPENSVHC 535
+CS P ++GL V V ++ C
Sbjct: 105 QCSGPASLRGLNVAEVQKSEFSC 127
Score = 47 (21.6 bits), Expect = 1.6e-10, Sum P(3) = 1.6e-10
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 265 QLSKLSALVNLDLSGNNFSNIDSVAFKSLFSL 296
QLS L +DLS N S++ + +F ++ L
Sbjct: 642 QLSTFKYLQLVDLSNNKISSLSNSSFTNMSQL 673
Score = 43 (20.2 bits), Expect = 0.00074, Sum P(3) = 0.00074
Identities = 22/100 (22%), Positives = 41/100 (41%)
Query: 419 SLKGNSLSHLEASHFPLE------RISFLDLSDN--PLHCDCNXXXXX---XXXXXXXKS 467
SL+G +++ ++ S F R+ LS P C C+ +
Sbjct: 111 SLRGLNVAEVQKSEFSCSGQGEAGRVPSCTLSSGSCPAMCACSNGIVDCRGKGLTAIPAN 170
Query: 468 TMETTT-VAYEMTSNTSISPGTTTEAQRVDRIIKNNHSLT 506
ET T + E+ SI PG + +++ RI +N+ ++
Sbjct: 171 LPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIS 210
Score = 39 (18.8 bits), Expect = 1.1e-15, Sum P(3) = 1.1e-15
Identities = 8/30 (26%), Positives = 15/30 (50%)
Query: 507 IVLNNLKCSSPPDIKGLEVKAVPENSVHCE 536
IV N +C +P ++ + ++ V CE
Sbjct: 554 IVTGNPRCQNPDFLRQIPLQDVAFPDFRCE 583
Score = 38 (18.4 bits), Expect = 0.00034, Sum P(3) = 0.00034
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 269 LSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
L L L L+ NN S I +F + L+ +++
Sbjct: 44 LRGLEVLTLNNNNISTIPVSSFNHMPKLRTFRLH 77
>RGD|69310 [details] [associations]
symbol:Slit2 "slit homolog 2 (Drosophila)" species:10116 "Rattus
norvegicus" [GO:0001656 "metanephros development" evidence=ISO]
[GO:0001657 "ureteric bud development" evidence=ISO] [GO:0001701 "in
utero embryonic development" evidence=ISO] [GO:0001933 "negative
regulation of protein phosphorylation" evidence=ISO] [GO:0002042
"cell migration involved in sprouting angiogenesis" evidence=ISO]
[GO:0002689 "negative regulation of leukocyte chemotaxis"
evidence=ISO] [GO:0004963 "follicle-stimulating hormone receptor
activity" evidence=IEA] [GO:0005095 "GTPase inhibitor activity"
evidence=ISO] [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005615 "extracellular
space" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0006935 "chemotaxis"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=ISO] [GO:0007411
"axon guidance" evidence=ISO] [GO:0007420 "brain development"
evidence=IEP] [GO:0008045 "motor neuron axon guidance" evidence=ISO]
[GO:0008201 "heparin binding" evidence=IEA;ISO] [GO:0008285
"negative regulation of cell proliferation" evidence=ISO]
[GO:0009986 "cell surface" evidence=ISO] [GO:0010593 "negative
regulation of lamellipodium assembly" evidence=ISO] [GO:0010596
"negative regulation of endothelial cell migration" evidence=ISO]
[GO:0010629 "negative regulation of gene expression" evidence=ISO]
[GO:0014912 "negative regulation of smooth muscle cell migration"
evidence=ISO] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016337 "cell-cell adhesion" evidence=ISO] [GO:0021510 "spinal
cord development" evidence=IEP] [GO:0021772 "olfactory bulb
development" evidence=ISO] [GO:0021836 "chemorepulsion involved in
postnatal olfactory bulb interneuron migration" evidence=ISO]
[GO:0021972 "corticospinal neuron axon guidance through spinal cord"
evidence=ISO] [GO:0022029 "telencephalon cell migration"
evidence=ISO] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0030336 "negative regulation of cell migration" evidence=ISO]
[GO:0030837 "negative regulation of actin filament polymerization"
evidence=ISO] [GO:0031290 "retinal ganglion cell axon guidance"
evidence=ISO] [GO:0031667 "response to nutrient levels"
evidence=IEP] [GO:0032870 "cellular response to hormone stimulus"
evidence=ISO] [GO:0033563 "dorsal/ventral axon guidance"
evidence=ISO] [GO:0035385 "Roundabout signaling pathway"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=ISO] [GO:0043065 "positive regulation of apoptotic process"
evidence=ISO] [GO:0043116 "negative regulation of vascular
permeability" evidence=ISO] [GO:0043237 "laminin-1 binding"
evidence=ISO] [GO:0043394 "proteoglycan binding" evidence=ISO]
[GO:0043395 "heparan sulfate proteoglycan binding" evidence=IDA]
[GO:0045499 "chemorepellent activity" evidence=ISO] [GO:0048495
"Roundabout binding" evidence=ISO] [GO:0048754 "branching
morphogenesis of an epithelial tube" evidence=ISO] [GO:0048812
"neuron projection morphogenesis" evidence=ISO] [GO:0048846 "axon
extension involved in axon guidance" evidence=ISO] [GO:0050728
"negative regulation of inflammatory response" evidence=IMP]
[GO:0050919 "negative chemotaxis" evidence=ISO] [GO:0050929
"induction of negative chemotaxis" evidence=ISO] [GO:0051058
"negative regulation of small GTPase mediated signal transduction"
evidence=ISO] [GO:0051414 "response to cortisol stimulus"
evidence=ISO] [GO:0060603 "mammary gland duct morphogenesis"
evidence=ISO] [GO:0060763 "mammary duct terminal end bud growth"
evidence=ISO] [GO:0061364 "apoptotic process involved in luteolysis"
evidence=ISO] [GO:0070100 "negative regulation of chemokine-mediated
signaling pathway" evidence=ISO] [GO:0071504 "cellular response to
heparin" evidence=ISO] [GO:0071672 "negative regulation of smooth
muscle cell chemotaxis" evidence=ISO] [GO:0071676 "negative
regulation of mononuclear cell migration" evidence=ISO] [GO:0090024
"negative regulation of neutrophil chemotaxis" evidence=ISO]
[GO:0090027 "negative regulation of monocyte chemotaxis"
evidence=IDA] [GO:0090260 "negative regulation of retinal ganglion
cell axon guidance" evidence=ISO] [GO:0090288 "negative regulation
of cellular response to growth factor stimulus" evidence=ISO]
[GO:0021834 "chemorepulsion involved in embryonic olfactory bulb
interneuron precursor migration" evidence=ISO] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR002272 PRINTS:PR01143 PROSITE:PS51450
RGD:69310 GO:GO:0016021 GO:GO:0005886 GO:GO:0005576 GO:GO:0007420
GO:GO:0030154 GO:GO:0050728 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0008201
GO:GO:0006935 GO:GO:0031667 GO:GO:0042699 GO:GO:0043395
GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0004963 Pfam:PF01463 GO:GO:0090027 HOVERGEN:HBG057959
EMBL:AF141386 IPI:IPI00361914 UniGene:Rn.146652
ProteinModelPortal:Q9WVC1 SMR:Q9WVC1 IntAct:Q9WVC1 STRING:Q9WVC1
PRIDE:Q9WVC1 HOGENOM:HOG000170672 InParanoid:Q9WVC1
ArrayExpress:Q9WVC1 Genevestigator:Q9WVC1
GermOnline:ENSRNOG00000003840 Uniprot:Q9WVC1
Length = 766
Score = 206 (77.6 bits), Expect = 2.3e-20, Sum P(4) = 2.3e-20
Identities = 61/203 (30%), Positives = 97/203 (47%)
Query: 10 LILALTKLNKAI---CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNV 66
L L L+ LNK CP++C C ++ C L +VP + + + L N I+ +
Sbjct: 13 LALVLSILNKVAPHACPAQCSCSGSTVD--CHGLALRIVPRNIPRNTERLDLNGNNITRI 70
Query: 67 HYT-LSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELK 125
T + LR L L NKI+ + F +L L ++ N + + F G +L
Sbjct: 71 TKTDFAGLRHLRILQLMENKISTIERGAFHDLKELERLRLNRNNLQLFPELLFLGTAKLY 130
Query: 126 TLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILD 185
LDLS N+I I + AFR + ++ L L +N I+ ED F +L+ L +L L+NN I
Sbjct: 131 RLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGA-FRALRDLEVLTLNNNNITR 189
Query: 186 VPNNVLSNLPHQSLHYLYLNENL 208
+ +++P L+ N NL
Sbjct: 190 LSVASFNHMPKLRTFRLHSN-NL 211
Score = 181 (68.8 bits), Expect = 1.2e-15, Sum P(3) = 1.2e-15
Identities = 53/164 (32%), Positives = 83/164 (50%)
Query: 22 CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHY-TLSFYIELRSLD 80
CP C C + ++ C GL +P L + I L +N I + S Y +LR LD
Sbjct: 277 CPIACTCSNNIVD--CRGKGLTEIPTNLPETITEIRLEQNSIRVIPPGAFSPYKKLRRLD 334
Query: 81 LSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKT 140
LS N+I+ L F+ L +L + N+I+ L K F+GL L+ L L+ NKI+ +
Sbjct: 335 LSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVD 394
Query: 141 AFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQIL 184
AF+D +L LL L N + FS+L++++ + L N +
Sbjct: 395 AFQDLHNLNLLSLYDNKLQTVAKGT-FSALRAIQTMHLAQNPFI 437
Score = 162 (62.1 bits), Expect = 1.5e-13, Sum P(3) = 1.5e-13
Identities = 46/151 (30%), Positives = 76/151 (50%)
Query: 76 LRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKIS 135
+ + L N I V+ F KL L++S N+IS L+ D F+GL+ L +L L NKI+
Sbjct: 306 ITEIRLEQNSIRVIPPGAFSPYKKLRRLDLSNNQISELAPDAFQGLRSLNSLVLYGNKIT 365
Query: 136 VINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLP 195
+ K+ F L+LL+L+ N I + F L +L +L L +N++ V S L
Sbjct: 366 ELPKSLFEGLFSLQLLLLNANKINCLR-VDAFQDLHNLNLLSLYDNKLQTVAKGTFSAL- 423
Query: 196 HQSLHYLYLNENLIETVLDNSFPFTLTNLHT 226
+++ ++L +N + D + LHT
Sbjct: 424 -RAIQTMHLAQNPF--ICDCHLKWLADYLHT 451
Score = 151 (58.2 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 46/159 (28%), Positives = 73/159 (45%)
Query: 22 CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSF--YIELRSL 79
CP +C+C + C++ L +P + + L N + + T F +LR +
Sbjct: 502 CPEKCRC--EGTTVDCSNQKLNKIPDHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKI 559
Query: 80 DLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINK 139
+LS NKI + FE + + + ++ N + + FKGL+ LKTL L N+IS +
Sbjct: 560 NLSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRISCVGN 619
Query: 140 TAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKL 178
+F + LL L N IT F +L SL L L
Sbjct: 620 DSFTGLGSVRLLSLYDNQITTVAPGA-FGTLHSLSTLNL 657
Score = 149 (57.5 bits), Expect = 6.1e-14, Sum P(4) = 6.1e-14
Identities = 43/127 (33%), Positives = 62/127 (48%)
Query: 103 LNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFE 162
L+++ N I+ ++K F GL+ L+ L L NKIS I + AF D LE L L+ NN+ F
Sbjct: 60 LDLNGNNITRITKTDFAGLRHLRILQLMENKISTIERGAFHDLKELERLRLNRNNLQLFP 119
Query: 163 DSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLT 222
+ + K R L L NQI +P + L L+ N I + D +F L
Sbjct: 120 ELLFLGTAKLYR-LDLSENQIQAIPRKAFRGAV--DIKNLQLDYNQISCIEDGAFR-ALR 175
Query: 223 NLHTLAL 229
+L L L
Sbjct: 176 DLEVLTL 182
Score = 113 (44.8 bits), Expect = 1.4e-19, Sum P(3) = 1.4e-19
Identities = 37/116 (31%), Positives = 53/116 (45%)
Query: 340 KCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINEN 398
K RLDLS N S + AF+ L SL + L N + + + F L+ +++N N
Sbjct: 329 KLRRLDLSNNQISELAPDAFQGLRSLN--SLVLYGNKITELPKSLFEGLFSLQLLLLNAN 386
Query: 399 MNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPLHCDCN 453
+ L FQ NL +SL N L + F L I + L+ NP CDC+
Sbjct: 387 -KINCLRVDAFQDLHNLNLLSLYDNKLQTVAKGTFSALRAIQTMHLAQNPFICDCH 441
Score = 102 (41.0 bits), Expect = 2.3e-20, Sum P(4) = 2.3e-20
Identities = 32/108 (29%), Positives = 57/108 (52%)
Query: 344 LDLSGNNFSNIDSVA-FKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNL 401
L L+ N F+ +++ FK L L+ KINL N + I++ AF + +++ N L
Sbjct: 534 LRLNNNEFTVLEATGIFKKLPQLR--KINLSNNKITDIEEGAFEGASGVNEILLTSN-RL 590
Query: 402 KQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPL 448
+ + K+F+G +LK++ L+ N +S + F L + L L DN +
Sbjct: 591 ENVQHKMFKGLESLKTLMLRSNRISCVGNDSFTGLGSVRLLSLYDNQI 638
Score = 98 (39.6 bits), Expect = 5.9e-20, Sum P(4) = 5.9e-20
Identities = 28/113 (24%), Positives = 60/113 (53%)
Query: 343 RLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNL 401
+++LS N ++I+ AF+ + +I L N L+++ + F L+T+++ N +
Sbjct: 558 KINLSNNKITDIEEGAFEGASGVN--EILLTSNRLENVQHKMFKGLESLKTLMLRSN-RI 614
Query: 402 KQLPSKLFQGNTNLKSVSLKGNSLSHLEASHF-PLERISFLDLSDNPLHCDCN 453
+ + F G +++ +SL N ++ + F L +S L+L NP +C+C+
Sbjct: 615 SCVGNDSFTGLGSVRLLSLYDNQITTVAPGAFGTLHSLSTLNLLANPFNCNCH 667
Score = 85 (35.0 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 34/127 (26%), Positives = 49/127 (38%)
Query: 176 LKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXX 235
L L+ N I + + L H L L L EN I T+ +F L L L L
Sbjct: 60 LDLNGNNITRITKTDFAGLRH--LRILQLMENKISTIERGAF-HDLKELERLRLNRNNLQ 116
Query: 236 XXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFS 295
+ L+ AIP K + NL L N S I+ AF++L
Sbjct: 117 LFPELLFLGTAKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRD 176
Query: 296 LKLVKIN 302
L+++ +N
Sbjct: 177 LEVLTLN 183
Score = 69 (29.3 bits), Expect = 4.5e-15, Sum P(3) = 4.5e-15
Identities = 25/86 (29%), Positives = 42/86 (48%)
Query: 367 LVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSL 425
+ +I L N + I AF +L + ++ N + +L FQG +L S+ L GN +
Sbjct: 306 ITEIRLEQNSIRVIPPGAFSPYKKLRRLDLSNNQ-ISELAPDAFQGLRSLNSLVLYGNKI 364
Query: 426 SHLEASHFP-LERISFLDLSDNPLHC 450
+ L S F L + L L+ N ++C
Sbjct: 365 TELPKSLFEGLFSLQLLLLNANKINC 390
Score = 60 (26.2 bits), Expect = 1.0e-15, Sum P(4) = 1.0e-15
Identities = 21/87 (24%), Positives = 40/87 (45%)
Query: 337 GTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFVDNIQLETVIIN 396
G + L L GN + + F+ LFSL+L+ +N ++ + AF D L + +
Sbjct: 350 GLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNA-NKINCLRVDAFQDLHNLNLLSLY 408
Query: 397 ENMNLKQLPSKLFQGNTNLKSVSLKGN 423
+N L+ + F ++++ L N
Sbjct: 409 DN-KLQTVAKGTFSALRAIQTMHLAQN 434
Score = 57 (25.1 bits), Expect = 2.3e-20, Sum P(4) = 2.3e-20
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 269 LSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
L +L +L L GN + + F+ LFSL+L+ +N
Sbjct: 351 LRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLN 384
Score = 53 (23.7 bits), Expect = 5.9e-20, Sum P(4) = 5.9e-20
Identities = 15/36 (41%), Positives = 17/36 (47%)
Query: 261 IPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSL 296
IP S L LDLS N S + AF+ L SL
Sbjct: 319 IPPGAFSPYKKLRRLDLSNNQISELAPDAFQGLRSL 354
Score = 51 (23.0 bits), Expect = 3.0e-13, Sum P(3) = 3.0e-13
Identities = 27/115 (23%), Positives = 48/115 (41%)
Query: 268 KLSALVNLDLSGNNFSNIDSVAFKSLFSLK--LVKINLIPNLD-----SIDQXXXXXXXX 320
KL L ++LS N ++I+ AF+ + L+ N + N+ ++
Sbjct: 552 KLPQLRKINLSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRS 611
Query: 321 XXXXXXXXXAFSLTPLGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN 375
+F T LG+++ L L N + + AF +L SL +NL+ N
Sbjct: 612 NRISCVGNDSF--TGLGSVRL--LSLYDNQITTVAPGAFGTLHSLST--LNLLAN 660
Score = 38 (18.4 bits), Expect = 2.3e-20, Sum P(4) = 2.3e-20
Identities = 8/30 (26%), Positives = 14/30 (46%)
Query: 507 IVLNNLKCSSPPDIKGLEVKAVPENSVHCE 536
IV N +C P +K + ++ V C+
Sbjct: 680 IVTGNPRCQKPYFLKEIPIQDVAIQDFTCD 709
Score = 38 (18.4 bits), Expect = 7.5e-14, Sum P(3) = 7.5e-14
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 390 LETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLS 426
L+TV+ N LK LP + + T L L GN +
Sbjct: 730 LDTVVRCSNKGLKVLPKGIPRDVTELY---LDGNQFT 763
>UNIPROTKB|E1BP10 [details] [associations]
symbol:SLIT1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050919 "negative chemotaxis" evidence=IEA] [GO:0048846
"axon extension involved in axon guidance" evidence=IEA]
[GO:0048495 "Roundabout binding" evidence=IEA] [GO:0040023
"establishment of nucleus localization" evidence=IEA] [GO:0033563
"dorsal/ventral axon guidance" evidence=IEA] [GO:0031290 "retinal
ganglion cell axon guidance" evidence=IEA] [GO:0022028 "tangential
migration from the subventricular zone to the olfactory bulb"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 GO:GO:0005737 GO:GO:0005615 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0008045
PROSITE:PS01186 InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274
SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 InterPro:IPR025875
Pfam:PF12799 GO:GO:0031290 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
Pfam:PF12661 GO:GO:0033563 Pfam:PF01463
GeneTree:ENSGT00700000104083 GO:GO:0022028 GO:GO:0050919
OMA:KCVHGKC EMBL:DAAA02058910 IPI:IPI00697614
Ensembl:ENSBTAT00000061296 Uniprot:E1BP10
Length = 1396
Score = 183 (69.5 bits), Expect = 4.6e-20, Sum P(4) = 4.6e-20
Identities = 57/170 (33%), Positives = 87/170 (51%)
Query: 17 LNKAICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRE-NRISNVHY-TLSFYI 74
L+ CP+ C C + ++ C GL +P L PE T I E N I ++ S Y
Sbjct: 139 LSSGSCPAMCACSNGIVD--CRGKGLTAIPANL-PEAMTEIRLELNGIKSIPPGAFSPYR 195
Query: 75 ELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKI 134
+LR +DLS N+I+ + F+ L +L + N+I+ L + F GL L+ L L+ NKI
Sbjct: 196 KLRRIDLSNNQISEIAPDAFQGLRSLNSLVLYGNKITDLPQGVFGGLFTLQLLLLNANKI 255
Query: 135 SVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQIL 184
+ I AF+D +L LL L N I F+SL++++ L L N +
Sbjct: 256 NCIRLDAFQDLQNLSLLSLYDNKIQSLAKGT-FTSLRAIQTLHLAQNPFI 304
Score = 173 (66.0 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 42/135 (31%), Positives = 68/135 (50%)
Query: 22 CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSFYIELRSLDL 81
CP C C D + C++ L+ +P + V + L N+ + V LS + L+ +DL
Sbjct: 596 CPQECACLDTVVR--CSNKHLQTLPKGIPKNVTELYLDGNQFTLVPAQLSTFKYLQLVDL 653
Query: 82 SVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTA 141
S NKI+ L + +F ++L L +SYN + + F+GL+ L+ L L N IS + +
Sbjct: 654 SNNKISSLSNSSFTNMSQLTTLILSYNSLQCIPPLAFQGLRSLRLLSLHGNDISTLQEGI 713
Query: 142 FRDTLHLELLILSFN 156
F D L L + N
Sbjct: 714 FADVTSLSHLAIGAN 728
Score = 166 (63.5 bits), Expect = 6.6e-17, Sum P(3) = 6.6e-17
Identities = 45/160 (28%), Positives = 80/160 (50%)
Query: 21 ICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSF--YIELRS 78
+CP +C+C +E C+ L +P ++ + L N IS + T F L+
Sbjct: 374 VCPHKCRCEASMVE--CSSLKLTKIPERVPQATAELRLNNNEISILEATGMFKKLTHLKK 431
Query: 79 LDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVIN 138
++LS NK++ + FE + L+++ N++ ++ F+GL+ L+TL L N+IS I+
Sbjct: 432 INLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMFRGLEGLRTLMLRNNRISCIH 491
Query: 139 KTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKL 178
+F ++ LL L N I F +L++L L L
Sbjct: 492 NDSFTGLRNVRLLSLYDNQIATISPGA-FDTLQALSTLNL 530
Score = 142 (55.0 bits), Expect = 2.7e-14, Sum P(3) = 2.7e-14
Identities = 47/128 (36%), Positives = 66/128 (51%)
Query: 103 LNISYNEISAL-SKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYF 161
L ++ NEIS L + FK L LK ++LS NK+S I AF + L L+ N +
Sbjct: 407 LRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESI 466
Query: 162 EDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTL 221
S +F L+ LR L L NN+I + N+ + L + L LY +N I T+ +F TL
Sbjct: 467 R-SGMFRGLEGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLY--DNQIATISPGAFD-TL 522
Query: 222 TNLHTLAL 229
L TL L
Sbjct: 523 QALSTLNL 530
Score = 138 (53.6 bits), Expect = 4.6e-20, Sum P(4) = 4.6e-20
Identities = 42/122 (34%), Positives = 67/122 (54%)
Query: 335 PLGTLK-CDRLDLSGNNFSNIDSVAFKSLFS-LKLVKINLIPNLDSIDQRAFVDNIQLET 392
P G K L L GN F+ + A S F L+LV ++ + S+ +F + QL T
Sbjct: 618 PKGIPKNVTELYLDGNQFTLVP--AQLSTFKYLQLVDLSN-NKISSLSNSSFTNMSQLTT 674
Query: 393 VIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPLHCD 451
+I++ N +L+ +P FQG +L+ +SL GN +S L+ F + +S L + NPL+CD
Sbjct: 675 LILSYN-SLQCIPPLAFQGLRSLRLLSLHGNDISTLQEGIFADVTSLSHLAIGANPLYCD 733
Query: 452 CN 453
C+
Sbjct: 734 CH 735
Score = 127 (49.8 bits), Expect = 9.5e-13, Sum P(3) = 9.5e-13
Identities = 38/130 (29%), Positives = 65/130 (50%)
Query: 79 LDLSVNKINVLGSHN-FEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVI 137
L L+ N+I++L + F+ L +N+S N++S + F+G + L L+ N++ I
Sbjct: 407 LRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESI 466
Query: 138 NKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQ 197
FR L L+L N I+ + F+ L+++R+L L +NQI + L Q
Sbjct: 467 RSGMFRGLEGLRTLMLRNNRISCIHNDS-FTGLRNVRLLSLYDNQIATISPGAFDTL--Q 523
Query: 198 SLHYLYLNEN 207
+L L L N
Sbjct: 524 ALSTLNLLAN 533
Score = 125 (49.1 bits), Expect = 4.8e-11, Sum P(3) = 4.8e-11
Identities = 41/117 (35%), Positives = 56/117 (47%)
Query: 340 KCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINEN 398
K R+DLS N S I AF+ L SL + L N + + Q F L+ +++N N
Sbjct: 196 KLRRIDLSNNQISEIAPDAFQGLRSLN--SLVLYGNKITDLPQGVFGGLFTLQLLLLNAN 253
Query: 399 -MNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPLHCDCN 453
+N +L + FQ NL +SL N + L F L I L L+ NP CDCN
Sbjct: 254 KINCIRLDA--FQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQNPFICDCN 308
Score = 124 (48.7 bits), Expect = 1.0e-13, Sum P(4) = 1.0e-13
Identities = 30/80 (37%), Positives = 45/80 (56%)
Query: 104 NISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFED 163
++S N I A+ + F+G +LK L L N+I I + AFR LE+L L+ NNIT
Sbjct: 1 DLSENTIQAIPRKAFRGATDLKNLQLDKNQIGCIEEGAFRALRGLEVLTLNNNNITTIPV 60
Query: 164 SEIFSSLKSLRILKLDNNQI 183
S F+ + LR +L +N +
Sbjct: 61 SS-FNHMPKLRTFRLHSNHL 79
Score = 109 (43.4 bits), Expect = 5.3e-16, Sum P(3) = 5.3e-16
Identities = 32/112 (28%), Positives = 59/112 (52%)
Query: 343 RLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNL 401
+++LS N S I+ AF+ S+ +++L N L+SI F L T+++ N +
Sbjct: 431 KINLSNNKVSEIEDGAFEGAASVS--ELHLTANQLESIRSGMFRGLEGLRTLMLRNN-RI 487
Query: 402 KQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPLHCDC 452
+ + F G N++ +SL N ++ + F L+ +S L+L NP +C+C
Sbjct: 488 SCIHNDSFTGLRNVRLLSLYDNQIATISPGAFDTLQALSTLNLLANPFNCNC 539
Score = 103 (41.3 bits), Expect = 1.2e-11, Sum P(4) = 1.2e-11
Identities = 27/78 (34%), Positives = 40/78 (51%)
Query: 128 DLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVP 187
DLS N I I + AFR L+ L L N I E+ F +L+ L +L L+NN I +P
Sbjct: 1 DLSENTIQAIPRKAFRGATDLKNLQLDKNQIGCIEEGA-FRALRGLEVLTLNNNNITTIP 59
Query: 188 NNVLSNLPHQSLHYLYLN 205
+ +++P L+ N
Sbjct: 60 VSSFNHMPKLRTFRLHSN 77
Score = 100 (40.3 bits), Expect = 5.2e-10, Sum P(3) = 5.2e-10
Identities = 33/109 (30%), Positives = 52/109 (47%)
Query: 53 VQTIILRENRISNVHY-TLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEIS 111
++ I L N++S + + L L+ N++ + S F L L + N IS
Sbjct: 429 LKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMFRGLEGLRTLMLRNNRIS 488
Query: 112 ALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLH----LELLILSFN 156
+ D+F GL+ ++ L L N+I+ I+ AF DTL L LL FN
Sbjct: 489 CIHNDSFTGLRNVRLLSLYDNQIATISPGAF-DTLQALSTLNLLANPFN 536
Score = 98 (39.6 bits), Expect = 5.2e-13, Sum P(5) = 5.2e-13
Identities = 43/133 (32%), Positives = 56/133 (42%)
Query: 121 LKELKT-LDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLD 179
L E T + L N I I AF L + LS N I+ + F L+SL L L
Sbjct: 169 LPEAMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQISEIAP-DAFQGLRSLNSLVLY 227
Query: 180 NNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXX 239
N+I D+P V L +L L LN N I + ++F L NL L+L
Sbjct: 228 GNKITDLPQGVFGGL--FTLQLLLLNANKINCIRLDAFQ-DLQNLSLLSLYDNKIQSLAK 284
Query: 240 XXXVTLR---TLH 249
+LR TLH
Sbjct: 285 GTFTSLRAIQTLH 297
Score = 90 (36.7 bits), Expect = 2.4e-10, Sum P(4) = 2.4e-10
Identities = 23/79 (29%), Positives = 37/79 (46%)
Query: 80 DLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINK 139
DLS N I + F L NL + N+I + + F+ L+ L+ L L+ N I+ I
Sbjct: 1 DLSENTIQAIPRKAFRGATDLKNLQLDKNQIGCIEEGAFRALRGLEVLTLNNNNITTIPV 60
Query: 140 TAFRDTLHLELLILSFNNI 158
++F L L N++
Sbjct: 61 SSFNHMPKLRTFRLHSNHL 79
Score = 61 (26.5 bits), Expect = 4.1e-06, Sum P(3) = 4.1e-06
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 260 AIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
AIP K + L NL L N I+ AF++L L+++ +N
Sbjct: 9 AIPRKAFRGATDLKNLQLDKNQIGCIEEGAFRALRGLEVLTLN 51
Score = 58 (25.5 bits), Expect = 5.2e-13, Sum P(5) = 5.2e-13
Identities = 15/60 (25%), Positives = 29/60 (48%)
Query: 75 ELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKI 134
+L++L L N+I + F L L ++ N I+ + +F + +L+T L N +
Sbjct: 20 DLKNLQLDKNQIGCIEEGAFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHL 79
Score = 58 (25.5 bits), Expect = 3.3e-07, Sum P(4) = 3.3e-07
Identities = 25/77 (32%), Positives = 33/77 (42%)
Query: 153 LSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETV 212
LS N I + F L+ L+LD NQI + L + L L LN N I T+
Sbjct: 2 LSENTIQAIP-RKAFRGATDLKNLQLDKNQIGCIEEGAFRAL--RGLEVLTLNNNNITTI 58
Query: 213 LDNSFPFTLTNLHTLAL 229
+SF + L T L
Sbjct: 59 PVSSFNH-MPKLRTFRL 74
Score = 58 (25.5 bits), Expect = 1.5e-05, Sum P(4) = 1.5e-05
Identities = 21/87 (24%), Positives = 40/87 (45%)
Query: 337 GTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFVDNIQLETVIIN 396
G + L L GN +++ F LF+L+L+ +N ++ I AF D L + +
Sbjct: 217 GLRSLNSLVLYGNKITDLPQGVFGGLFTLQLLLLNA-NKINCIRLDAFQDLQNLSLLSLY 275
Query: 397 ENMNLKQLPSKLFQGNTNLKSVSLKGN 423
+N ++ L F ++++ L N
Sbjct: 276 DN-KIQSLAKGTFTSLRAIQTLHLAQN 301
Score = 57 (25.1 bits), Expect = 6.3e-12, Sum P(4) = 6.3e-12
Identities = 16/59 (27%), Positives = 31/59 (52%)
Query: 390 LETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFPLERISFLDLSDNPL 448
L+TV+ N +L+ LP + + N+ + L GN + + A + + +DLS+N +
Sbjct: 603 LDTVVRCSNKHLQTLPKGIPK---NVTELYLDGNQFTLVPAQLSTFKYLQLVDLSNNKI 658
Score = 57 (25.1 bits), Expect = 1.6e-10, Sum P(3) = 1.6e-10
Identities = 18/62 (29%), Positives = 34/62 (54%)
Query: 168 SSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTL 227
S+ K L+++ L NN+I + N+ +N+ L L L+ N ++ + +F L +L L
Sbjct: 643 STFKYLQLVDLSNNKISSLSNSSFTNM--SQLTTLILSYNSLQCIPPLAFQ-GLRSLRLL 699
Query: 228 AL 229
+L
Sbjct: 700 SL 701
Score = 56 (24.8 bits), Expect = 2.1e-10, Sum P(3) = 2.1e-10
Identities = 15/59 (25%), Positives = 27/59 (45%)
Query: 244 TLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
T + L ++ + +S L L LS N+ I +AF+ L SL+L+ ++
Sbjct: 644 TFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNSLQCIPPLAFQGLRSLRLLSLH 702
Score = 55 (24.4 bits), Expect = 4.6e-20, Sum P(4) = 4.6e-20
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 263 TKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSI 310
T KL+ L ++LS N S I+ AF+ S+ +++L N L+SI
Sbjct: 420 TGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVS--ELHLTANQLESI 466
Score = 53 (23.7 bits), Expect = 1.6e-13, Sum P(4) = 1.6e-13
Identities = 15/37 (40%), Positives = 18/37 (48%)
Query: 260 AIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSL 296
+IP S L +DLS N S I AF+ L SL
Sbjct: 185 SIPPGAFSPYRKLRRIDLSNNQISEIAPDAFQGLRSL 221
Score = 52 (23.4 bits), Expect = 2.0e-13, Sum P(4) = 2.0e-13
Identities = 12/34 (35%), Positives = 21/34 (61%)
Query: 269 LSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
L +L +L L GN +++ F LF+L+L+ +N
Sbjct: 218 LRSLNSLVLYGNKITDLPQGVFGGLFTLQLLLLN 251
Score = 48 (22.0 bits), Expect = 1.3e-09, Sum P(3) = 1.3e-09
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 261 IPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSL 296
+P QLS L +DLS N S++ + +F ++ L
Sbjct: 638 VPA-QLSTFKYLQLVDLSNNKISSLSNSSFTNMSQL 672
Score = 42 (19.8 bits), Expect = 5.3e-16, Sum P(3) = 5.3e-16
Identities = 8/30 (26%), Positives = 15/30 (50%)
Query: 507 IVLNNLKCSSPPDIKGLEVKAVPENSVHCE 536
IV N +C +P ++ + ++ V CE
Sbjct: 553 IVTGNPRCQNPDFLRQIPLQDVASPDFRCE 582
Score = 40 (19.1 bits), Expect = 4.6e-20, Sum P(4) = 4.6e-20
Identities = 6/24 (25%), Positives = 12/24 (50%)
Query: 513 KCSSPPDIKGLEVKAVPENSVHCE 536
+C+ P D++G + P C+
Sbjct: 754 RCAGPLDMEGKLLLTTPAKKFECQ 777
>UNIPROTKB|J9NZ68 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005576 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 Pfam:PF00054 SMART:SM00274 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF12661 Pfam:PF01463
GeneTree:ENSGT00700000104083 EMBL:AAEX03002614 EMBL:AAEX03002615
EMBL:AAEX03002616 Ensembl:ENSCAFT00000044488 Uniprot:J9NZ68
Length = 1337
Score = 200 (75.5 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 48/135 (35%), Positives = 71/135 (52%)
Query: 22 CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSFYIELRSLDL 81
CP+ C C D + C++ GL+V+P + +V + L N + V L Y L +DL
Sbjct: 534 CPTECTCLDTVVR--CSNKGLKVLPKGIPRDVTELYLDGNHFTLVPKELYNYKHLTLIDL 591
Query: 82 SVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTA 141
S N+I+ L + +F +LL L +SYN + + TF GLK L+ L L N ISV+ + A
Sbjct: 592 SNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGA 651
Query: 142 FRDTLHLELLILSFN 156
F D L L + N
Sbjct: 652 FSDLSALSHLAIGAN 666
Score = 182 (69.1 bits), Expect = 4.7e-20, Sum P(3) = 4.7e-20
Identities = 52/164 (31%), Positives = 83/164 (50%)
Query: 22 CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHY-TLSFYIELRSLD 80
CP+ C C + ++ C GL +P L + I L +N I + S Y +LR +D
Sbjct: 80 CPAACTCSNNIVD--CRGKGLTEIPTNLPETITEIRLEQNSIKVIPPGAFSPYKKLRRID 137
Query: 81 LSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKT 140
LS N+I+ L F+ L +L + N+I+ L K F+GL L+ L L+ NKI+ +
Sbjct: 138 LSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVD 197
Query: 141 AFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQIL 184
AF+D +L LL L N + FS L++++ + L N +
Sbjct: 198 AFQDLHNLNLLSLYDNKLQTIAKGT-FSPLRAIQTMHLAQNPFI 240
Score = 161 (61.7 bits), Expect = 9.4e-18, Sum P(3) = 9.4e-18
Identities = 44/151 (29%), Positives = 76/151 (50%)
Query: 76 LRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKIS 135
+ + L N I V+ F KL +++S N+IS L+ D F+GL+ L +L L NKI+
Sbjct: 109 ITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKIT 168
Query: 136 VINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLP 195
+ K+ F L+LL+L+ N I + F L +L +L L +N++ + S P
Sbjct: 169 ELPKSLFEGLFSLQLLLLNANKINCLR-VDAFQDLHNLNLLSLYDNKLQTIAKGTFS--P 225
Query: 196 HQSLHYLYLNENLIETVLDNSFPFTLTNLHT 226
+++ ++L +N + D + LHT
Sbjct: 226 LRAIQTMHLAQNPF--ICDCHLKWLADYLHT 254
Score = 145 (56.1 bits), Expect = 4.7e-20, Sum P(3) = 4.7e-20
Identities = 39/113 (34%), Positives = 66/113 (58%)
Query: 344 LDLSGNNFSNIDSVAFKSLFSLK-LVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNL 401
L L GN+F+ + K L++ K L I+L N + ++ ++F + QL T+I++ N L
Sbjct: 566 LYLDGNHFTLVP----KELYNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN-RL 620
Query: 402 KQLPSKLFQGNTNLKSVSLKGNSLSHL-EASHFPLERISFLDLSDNPLHCDCN 453
+ +P + F G +L+ +SL GN +S + E + L +S L + NPL+CDCN
Sbjct: 621 RCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFSDLSALSHLAIGANPLYCDCN 673
Score = 139 (54.0 bits), Expect = 2.1e-15, Sum P(3) = 2.1e-15
Identities = 44/159 (27%), Positives = 70/159 (44%)
Query: 22 CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSF--YIELRSL 79
CP +C+C + C++ L +P + + L N + + T F +LR +
Sbjct: 313 CPEKCRC--EGTTVDCSNQKLTKIPDHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKI 370
Query: 80 DLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINK 139
+ S NKI + FE + + ++ N + + FKGL+ LKTL L N+IS +
Sbjct: 371 NFSNNKITDIEEGAFEGAAGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRISCVGN 430
Query: 140 TAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKL 178
+F + LL L N I F +L SL L L
Sbjct: 431 DSFIGLSSVRLLSLYDNQIATIAPGA-FDTLHSLSTLNL 468
Score = 128 (50.1 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 35/105 (33%), Positives = 53/105 (50%)
Query: 103 LNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFE 162
L + N + + K+ + K L +DLS N+IS ++ +F + L LILS+N +
Sbjct: 566 LYLDGNHFTLVPKELYN-YKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIP 624
Query: 163 DSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNEN 207
F LKSLR+L L N I VP S+L +L +L + N
Sbjct: 625 P-RTFDGLKSLRLLSLHGNDISVVPEGAFSDL--SALSHLAIGAN 666
Score = 100 (40.3 bits), Expect = 1.9e-15, Sum P(3) = 1.9e-15
Identities = 31/108 (28%), Positives = 56/108 (51%)
Query: 344 LDLSGNNFSNIDSVA-FKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNL 401
L L+ N F+ +++ FK L L+ KIN N + I++ AF + +++ N L
Sbjct: 345 LRLNNNEFTVLEATGIFKKLPQLR--KINFSNNKITDIEEGAFEGAAGVNEILLTSN-RL 401
Query: 402 KQLPSKLFQGNTNLKSVSLKGNSLSHLEASHF-PLERISFLDLSDNPL 448
+ + K+F+G +LK++ L+ N +S + F L + L L DN +
Sbjct: 402 ENVQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLSSVRLLSLYDNQI 449
Score = 96 (38.9 bits), Expect = 5.0e-11, Sum P(3) = 5.0e-11
Identities = 32/111 (28%), Positives = 53/111 (47%)
Query: 51 PEVQTIILRENRISNVHY-TLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNE 109
P+++ I N+I+++ + + L+ N++ + F+ L L + N
Sbjct: 365 PQLRKINFSNNKITDIEEGAFEGAAGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNR 424
Query: 110 ISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLH----LELLILSFN 156
IS + D+F GL ++ L L N+I+ I AF DTLH L LL FN
Sbjct: 425 ISCVGNDSFIGLSSVRLLSLYDNQIATIAPGAF-DTLHSLSTLNLLANPFN 474
Score = 95 (38.5 bits), Expect = 6.2e-15, Sum P(3) = 6.2e-15
Identities = 27/112 (24%), Positives = 59/112 (52%)
Query: 343 RLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNL 401
+++ S N ++I+ AF+ + +I L N L+++ + F L+T+++ N +
Sbjct: 369 KINFSNNKITDIEEGAFEGAAGVN--EILLTSNRLENVQHKMFKGLESLKTLMLRSN-RI 425
Query: 402 KQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPLHCDC 452
+ + F G ++++ +SL N ++ + F L +S L+L NP +C+C
Sbjct: 426 SCVGNDSFIGLSSVRLLSLYDNQIATIAPGAFDTLHSLSTLNLLANPFNCNC 477
Score = 90 (36.7 bits), Expect = 2.0e-10, Sum P(3) = 2.0e-10
Identities = 38/158 (24%), Positives = 58/158 (36%)
Query: 126 TLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILD 185
T+D S K++ I + T L L + N T E + IF L LR + NN+I D
Sbjct: 323 TVDCSNQKLTKIPDHIPQYTAELRL---NNNEFTVLEATGIFKKLPQLRKINFSNNKITD 379
Query: 186 VPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTL 245
+ ++ + L N +E V F L +L TL L + L
Sbjct: 380 IEEGAFEGAA--GVNEILLTSNRLENVQHKMFK-GLESLKTLMLRSNRISCVGNDSFIGL 436
Query: 246 RTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFS 283
++ I L +L L+L N F+
Sbjct: 437 SSVRLLSLYDNQIATIAPGAFDTLHSLSTLNLLANPFN 474
Score = 76 (31.8 bits), Expect = 5.3e-13, Sum P(3) = 5.3e-13
Identities = 31/105 (29%), Positives = 42/105 (40%)
Query: 176 LKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXX 235
L LD N VP L N H +L + L+ N I T+ + SF +T L TL L
Sbjct: 566 LYLDGNHFTLVPKE-LYNYKHLTL--IDLSNNRISTLSNQSFS-NMTQLLTLILSYNRLR 621
Query: 236 XXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGN 280
L++L +P S LSAL +L + N
Sbjct: 622 CIPPRTFDGLKSLRLLSLHGNDISVVPEGAFSDLSALSHLAIGAN 666
Score = 57 (25.1 bits), Expect = 2.1e-11, Sum P(4) = 2.1e-11
Identities = 17/57 (29%), Positives = 29/57 (50%)
Query: 390 LETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFPLERISFLDLSDN 446
L+TV+ N LK LP + + T L L GN + + + + ++ +DLS+N
Sbjct: 541 LDTVVRCSNKGLKVLPKGIPRDVTELY---LDGNHFTLVPKELYNYKHLTLIDLSNN 594
Score = 57 (25.1 bits), Expect = 4.2e-07, Sum P(3) = 4.2e-07
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 269 LSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
L +L +L L GN + + F+ LFSL+L+ +N
Sbjct: 154 LRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLN 187
Score = 57 (25.1 bits), Expect = 4.2e-07, Sum P(3) = 4.2e-07
Identities = 26/126 (20%), Positives = 51/126 (40%)
Query: 180 NNQILDVPNNVLSNLPH---QSLHYLYLNENLIETVLDNSF-PFTLTNLHTLALXXXXXX 235
+N I+D L+ +P +++ + L +N I+ + +F P+ L + L
Sbjct: 87 SNNIVDCRGKGLTEIPTNLPETITEIRLEQNSIKVIPPGAFSPYK--KLRRIDLSNNQIS 144
Query: 236 XXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFS 295
LR+L+ +P L +L L L+ N + + AF+ L +
Sbjct: 145 ELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHN 204
Query: 296 LKLVKI 301
L L+ +
Sbjct: 205 LNLLSL 210
Score = 53 (23.7 bits), Expect = 1.1e-10, Sum P(3) = 1.1e-10
Identities = 15/45 (33%), Positives = 21/45 (46%)
Query: 261 IPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIP 305
IP + L +L L L GN+ S + AF L +L + I P
Sbjct: 623 IPPRTFDGLKSLRLLSLHGNDISVVPEGAFSDLSALSHLAIGANP 667
Score = 47 (21.6 bits), Expect = 4.6e-10, Sum P(3) = 4.6e-10
Identities = 11/36 (30%), Positives = 19/36 (52%)
Query: 261 IPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSL 296
+P K+L L +DLS N S + + +F ++ L
Sbjct: 576 VP-KELYNYKHLTLIDLSNNRISTLSNQSFSNMTQL 610
Score = 46 (21.3 bits), Expect = 4.7e-20, Sum P(3) = 4.7e-20
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 496 DRIIKNNHSLTIVLNNLKCSSPPDIKG 522
D +NN + +NN C PP+ G
Sbjct: 811 DNDCENNSTCVDGINNYTCLCPPEYTG 837
Score = 45 (20.9 bits), Expect = 7.3e-10, Sum P(3) = 7.3e-10
Identities = 17/87 (19%), Positives = 35/87 (40%)
Query: 337 GTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFVDNIQLETVIIN 396
G + + L+ N N+ FK L SLK + + + + +F+ + + +
Sbjct: 387 GAAGVNEILLTSNRLENVQHKMFKGLESLKTLMLRS-NRISCVGNDSFIGLSSVRLLSLY 445
Query: 397 ENMNLKQLPSKLFQGNTNLKSVSLKGN 423
+N P F +L +++L N
Sbjct: 446 DNQIATIAPGA-FDTLHSLSTLNLLAN 471
Score = 44 (20.5 bits), Expect = 2.1e-11, Sum P(4) = 2.1e-11
Identities = 26/113 (23%), Positives = 42/113 (37%)
Query: 268 KLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQXXXXXXXXXXXXXX 326
KL L ++ S N ++I+ AF+ + +I L N L+++
Sbjct: 363 KLPQLRKINFSNNKITDIEEGAFEGAAGVN--EILLTSNRLENVQHKMFKGLESLKTLML 420
Query: 327 XXXAFSLTP----LGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN 375
S +G L L N + I AF +L SL +NL+ N
Sbjct: 421 RSNRISCVGNDSFIGLSSVRLLSLYDNQIATIAPGAFDTLHSLST--LNLLAN 471
Score = 39 (18.8 bits), Expect = 2.5e-19, Sum P(3) = 2.5e-19
Identities = 9/28 (32%), Positives = 11/28 (39%)
Query: 496 DRIIKNNHSLTIVLNNLKCSSPPDIKGL 523
D KN T +N C+ P GL
Sbjct: 889 DHKCKNGAHCTDAVNGYTCTCPEGYSGL 916
Score = 39 (18.8 bits), Expect = 9.9e-15, Sum P(3) = 9.9e-15
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 505 LTIVL--NNLKCSSPPDIKGLE 524
LT++L N L+C P GL+
Sbjct: 611 LTLILSYNRLRCIPPRTFDGLK 632
Score = 38 (18.4 bits), Expect = 1.3e-14, Sum P(3) = 1.3e-14
Identities = 8/30 (26%), Positives = 14/30 (46%)
Query: 507 IVLNNLKCSSPPDIKGLEVKAVPENSVHCE 536
IV N +C P +K + ++ V C+
Sbjct: 491 IVTGNPRCQKPYFLKEIPIQDVAIQDFTCD 520
>ZFIN|ZDB-GENE-010306-4 [details] [associations]
symbol:slit3 "slit (Drosophila) homolog 3"
species:7955 "Danio rerio" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0030517 "negative regulation of axon extension"
evidence=IGI;IMP] InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 ZFIN:ZDB-GENE-010306-4 GO:GO:0005576
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 GO:GO:0030517 InterPro:IPR006207
PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041 Pfam:PF02210
Pfam:PF12661 InterPro:IPR026906 Pfam:PF13306 Pfam:PF01463
GeneTree:ENSGT00700000104083 EMBL:AL928691 EMBL:BX323583
IPI:IPI00502606 Ensembl:ENSDART00000146299 ArrayExpress:F1RCV3
Bgee:F1RCV3 Uniprot:F1RCV3
Length = 1516
Score = 196 (74.1 bits), Expect = 5.8e-20, Sum P(3) = 5.8e-20
Identities = 55/187 (29%), Positives = 91/187 (48%)
Query: 22 CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNV-HYTLSFYIELRSLD 80
CP +C C ++ C + VP + + + L N I+ + S LR L
Sbjct: 25 CPHKCSCSGSHVD--CQGQAFKTVPRGIPRNAERLDLDRNNITRITKVDFSGLKNLRVLH 82
Query: 81 LSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKT 140
L N+I+V+ FE +L + ++ N + L + F+ +L LDLS N+I + +
Sbjct: 83 LENNQISVIERGAFEGLKQLERIRLNRNRLQVLPELLFQSTTKLSRLDLSENQIQAVPRK 142
Query: 141 AFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLH 200
AFR ++ L L N+I+ ED F +L+ L IL L+NN I +P + +++P L
Sbjct: 143 AFRGITTVKNLQLDSNHISCIEDGA-FRALRDLEILTLNNNNITLIPLSSFNHMP--KLR 199
Query: 201 YLYLNEN 207
L L+ N
Sbjct: 200 TLRLHSN 206
Score = 190 (71.9 bits), Expect = 9.5e-19, Sum P(4) = 9.5e-19
Identities = 50/165 (30%), Positives = 83/165 (50%)
Query: 21 ICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHY-TLSFYIELRSL 79
ICP+ C C + ++ C GL +P L + I L +N I N+ S Y +L+ +
Sbjct: 271 ICPAACTCNNNIVD--CRRKGLTEIPANLPEGIVEIRLEQNMIKNIPAGAFSTYKKLKRI 328
Query: 80 DLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINK 139
DLS N+I+ + F L +L + N+I+ + K F GL L+ L L+ NKI+ +
Sbjct: 329 DLSKNQISEIAEDAFSGLRSLTSLVLYGNKIAEIPKGLFDGLVSLQLLLLNANKINCLRV 388
Query: 140 TAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQIL 184
F+D +L LL L N + +F+ L++++ L L N +
Sbjct: 389 NTFKDLQNLNLLSLYDNKLQTISKG-LFAPLRAIKTLHLAQNPFM 432
Score = 172 (65.6 bits), Expect = 2.6e-16, Sum P(3) = 2.6e-16
Identities = 50/163 (30%), Positives = 81/163 (49%)
Query: 21 ICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSF--YIELRS 78
+CP RC+C + C++ L +P L + L +N IS + T +F LR
Sbjct: 496 VCPERCRC--EGTVVDCSNLKLTKIPPHLPEHTTDLRLNDNEISILEATGAFKKLPNLRK 553
Query: 79 LDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVIN 138
++LS NK+ + F+ +L L ++ N++ ++S FKGL LKTL L N+IS ++
Sbjct: 554 INLSNNKLRDIREGAFDGAGGVLELLLTGNKLQSVSGRMFKGLIGLKTLMLRSNQISCVD 613
Query: 139 KTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNN 181
F + LL L N I+ F++L SL + L +N
Sbjct: 614 NATFTGLSSVRLLSLYDNRISTIAPGA-FNTLHSLSTINLLSN 655
Score = 164 (62.8 bits), Expect = 6.8e-16, Sum P(4) = 6.8e-16
Identities = 44/132 (33%), Positives = 70/132 (53%)
Query: 53 VQTIILRENRISNVHY-TLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEIS 111
++ + L N+IS + +L + L+ N++ VL F+ KL L++S N+I
Sbjct: 78 LRVLHLENNQISVIERGAFEGLKQLERIRLNRNRLQVLPELLFQSTTKLSRLDLSENQIQ 137
Query: 112 ALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLK 171
A+ + F+G+ +K L L N IS I AFR LE+L L+ NNIT S F+ +
Sbjct: 138 AVPRKAFRGITTVKNLQLDSNHISCIEDGAFRALRDLEILTLNNNNITLIPLSS-FNHMP 196
Query: 172 SLRILKLDNNQI 183
LR L+L +N +
Sbjct: 197 KLRTLRLHSNNL 208
Score = 156 (60.0 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 41/135 (30%), Positives = 63/135 (46%)
Query: 22 CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSFYIELRSLDL 81
CP C C + + C++ GL +P + + + L N +++V L +L LDL
Sbjct: 718 CPESCTCSETVVR--CSNRGLRSLPKTIPKDTTELYLEGNLLTSVPKELPNLKQLTLLDL 775
Query: 82 SVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTA 141
S N I+ L F +L L +SYN+I + F GL+ L+ L L N +S + + A
Sbjct: 776 SNNSISHLAPLTFSNMTQLATLILSYNQIRCVPVHAFDGLRSLRLLTLHGNDLSTVPEGA 835
Query: 142 FRDTLHLELLILSFN 156
F L L L N
Sbjct: 836 FNHLTSLSHLALGAN 850
Score = 151 (58.2 bits), Expect = 1.8e-14, Sum P(4) = 1.8e-14
Identities = 46/151 (30%), Positives = 76/151 (50%)
Query: 79 LDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVIN 138
LDL N I + +F L L++ N+IS + + F+GLK+L+ + L+ N++ V+
Sbjct: 57 LDLDRNNITRITKVDFSGLKNLRVLHLENNQISVIERGAFEGLKQLERIRLNRNRLQVLP 116
Query: 139 KTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQS 198
+ F+ T L L LS N I + F + +++ L+LD+N I + + L +
Sbjct: 117 ELLFQSTTKLSRLDLSENQIQAVP-RKAFRGITTVKNLQLDSNHISCIEDGAFRAL--RD 173
Query: 199 LHYLYLNENLIETVLDNSFPFTLTNLHTLAL 229
L L LN N I + +SF + L TL L
Sbjct: 174 LEILTLNNNNITLIPLSSFNH-MPKLRTLRL 203
Score = 150 (57.9 bits), Expect = 2.3e-14, Sum P(4) = 2.3e-14
Identities = 41/134 (30%), Positives = 74/134 (55%)
Query: 74 IELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNK 133
+E+R L N I + + F KL +++S N+IS +++D F GL+ L +L L NK
Sbjct: 302 VEIR---LEQNMIKNIPAGAFSTYKKLKRIDLSKNQISEIAEDAFSGLRSLTSLVLYGNK 358
Query: 134 ISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSN 193
I+ I K F + L+LL+L+ N I + F L++L +L L +N++ + + +
Sbjct: 359 IAEIPKGLFDGLVSLQLLLLNANKINCLRVNT-FKDLQNLNLLSLYDNKLQTISKGLFA- 416
Query: 194 LPHQSLHYLYLNEN 207
P +++ L+L +N
Sbjct: 417 -PLRAIKTLHLAQN 429
Score = 132 (51.5 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 39/124 (31%), Positives = 60/124 (48%)
Query: 330 AFSLTPLGTLK-CDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFVDNI 388
AF P G + +RLDL NN + I V F L +L++ ++L N S+ +R + +
Sbjct: 42 AFKTVPRGIPRNAERLDLDRNNITRITKVDFSGLKNLRV--LHLENNQISVIERGAFEGL 99
Query: 389 -QLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDN 446
QLE + +N N L+ LP LFQ T L + L N + + F + + L L N
Sbjct: 100 KQLERIRLNRN-RLQVLPELLFQSTTKLSRLDLSENQIQAVPRKAFRGITTVKNLQLDSN 158
Query: 447 PLHC 450
+ C
Sbjct: 159 HISC 162
Score = 124 (48.7 bits), Expect = 5.8e-20, Sum P(3) = 5.8e-20
Identities = 39/116 (33%), Positives = 54/116 (46%)
Query: 340 KCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINEN 398
K R+DLS N S I AF L SL + L N + I + F + L+ +++N N
Sbjct: 324 KLKRIDLSKNQISEIAEDAFSGLRSL--TSLVLYGNKIAEIPKGLFDGLVSLQLLLLNAN 381
Query: 399 MNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHF-PLERISFLDLSDNPLHCDCN 453
+ L F+ NL +SL N L + F PL I L L+ NP CDC+
Sbjct: 382 -KINCLRVNTFKDLQNLNLLSLYDNKLQTISKGLFAPLRAIKTLHLAQNPFMCDCH 436
Score = 124 (48.7 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 37/105 (35%), Positives = 53/105 (50%)
Query: 103 LNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFE 162
L + N ++++ K+ LK+L LDLS N IS + F + L LILS+N I
Sbjct: 750 LYLEGNLLTSVPKE-LPNLKQLTLLDLSNNSISHLAPLTFSNMTQLATLILSYNQIRCVP 808
Query: 163 DSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNEN 207
F L+SLR+L L N + VP ++L SL +L L N
Sbjct: 809 -VHAFDGLRSLRLLTLHGNDLSTVPEGAFNHLT--SLSHLALGAN 850
Score = 114 (45.2 bits), Expect = 2.1e-19, Sum P(4) = 2.1e-19
Identities = 37/112 (33%), Positives = 59/112 (52%)
Query: 344 LDLSGNNFSNIDSVAFKSLFSLK-LVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNL 401
L L GN +++ K L +LK L ++L N + + F + QL T+I++ N +
Sbjct: 750 LYLEGNLLTSVP----KELPNLKQLTLLDLSNNSISHLAPLTFSNMTQLATLILSYNQ-I 804
Query: 402 KQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPLHCDC 452
+ +P F G +L+ ++L GN LS + F L +S L L NPL+CDC
Sbjct: 805 RCVPVHAFDGLRSLRLLTLHGNDLSTVPEGAFNHLTSLSHLALGANPLYCDC 856
Score = 110 (43.8 bits), Expect = 4.1e-10, Sum P(4) = 4.1e-10
Identities = 43/164 (26%), Positives = 66/164 (40%)
Query: 119 KGL-KELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILK 177
+G+ + + LDL N I+ I K F +L +L L N I+ E F LK L ++
Sbjct: 48 RGIPRNAERLDLDRNNITRITKVDFSGLKNLRVLHLENNQISVIERGA-FEGLKQLERIR 106
Query: 178 LDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXX 237
L+ N++ +P + + L L L+EN I+ V +F +T + L L
Sbjct: 107 LNRNRLQVLPELLFQSTT--KLSRLDLSENQIQAVPRKAFR-GITTVKNLQLDSNHISCI 163
Query: 238 XXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNN 281
LR L IP + + L L L NN
Sbjct: 164 EDGAFRALRDLEILTLNNNNITLIPLSSFNHMPKLRTLRLHSNN 207
Score = 102 (41.0 bits), Expect = 1.0e-17, Sum P(3) = 1.0e-17
Identities = 31/113 (27%), Positives = 58/113 (51%)
Query: 343 RLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNL 401
+++LS N +I AF + +++ L N L S+ R F I L+T+++ N +
Sbjct: 553 KINLSNNKLRDIREGAFDGAGGV--LELLLTGNKLQSVSGRMFKGLIGLKTLMLRSNQ-I 609
Query: 402 KQLPSKLFQGNTNLKSVSLKGNSLSHLEASHF-PLERISFLDLSDNPLHCDCN 453
+ + F G ++++ +SL N +S + F L +S ++L NP CDC+
Sbjct: 610 SCVDNATFTGLSSVRLLSLYDNRISTIAPGAFNTLHSLSTINLLSNPYVCDCH 662
Score = 93 (37.8 bits), Expect = 8.7e-17, Sum P(3) = 8.7e-17
Identities = 33/106 (31%), Positives = 57/106 (53%)
Query: 344 LDLSGNNFSNIDSV-AFKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNL 401
L L+ N S +++ AFK L +L+ KINL N L I + AF + +++ N L
Sbjct: 529 LRLNDNEISILEATGAFKKLPNLR--KINLSNNKLRDIREGAFDGAGGVLELLLTGN-KL 585
Query: 402 KQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDN 446
+ + ++F+G LK++ L+ N +S ++ + F L + L L DN
Sbjct: 586 QSVSGRMFKGLIGLKTLMLRSNQISCVDNATFTGLSSVRLLSLYDN 631
Score = 86 (35.3 bits), Expect = 2.6e-08, Sum P(3) = 2.6e-08
Identities = 31/127 (24%), Positives = 51/127 (40%)
Query: 176 LKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXX 235
L LD N I + S L ++L L+L N I + +F L L + L
Sbjct: 57 LDLDRNNITRITKVDFSGL--KNLRVLHLENNQISVIERGAFE-GLKQLERIRLNRNRLQ 113
Query: 236 XXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFS 295
+ L A+P K ++ + NL L N+ S I+ AF++L
Sbjct: 114 VLPELLFQSTTKLSRLDLSENQIQAVPRKAFRGITTVKNLQLDSNHISCIEDGAFRALRD 173
Query: 296 LKLVKIN 302
L+++ +N
Sbjct: 174 LEILTLN 180
Score = 78 (32.5 bits), Expect = 3.0e-15, Sum P(3) = 3.0e-15
Identities = 67/289 (23%), Positives = 110/289 (38%)
Query: 180 NNQILDVPNNVLSNLPH---QSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXX 236
NN I+D L+ +P + + + L +N+I+ + +F T L + L
Sbjct: 279 NNNIVDCRRKGLTEIPANLPEGIVEIRLEQNMIKNIPAGAFS-TYKKLKRIDLSKNQISE 337
Query: 237 XXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSL 296
LR+L IP L +L L L+ N + + FK L +L
Sbjct: 338 IAEDAFSGLRSLTSLVLYGNKIAEIPKGLFDGLVSLQLLLLNANKINCLRVNTFKDLQNL 397
Query: 297 KLVKINLIPN-LDSIDQXXXXXXXXXXXXXXXXXAFS----LTPLGTLKCDR-LDLSGNN 350
L ++L N L +I + F L L D ++ SG
Sbjct: 398 NL--LSLYDNKLQTISKGLFAPLRAIKTLHLAQNPFMCDCHLKWLADYLFDNPIETSGAR 455
Query: 351 FSNIDSVAFKSLFSLKLVKINLIPNLD---SIDQRAFVDNIQLE------TVIINENMNL 401
S+ +A K + +K K D + F D + E TV+ N+ L
Sbjct: 456 CSHPRRLANKRISQVKGKKFRCTGAEDYRSRLSGECFQDLVCPERCRCEGTVVDCSNLKL 515
Query: 402 KQLPSKLFQGNTNLKSVSLKGNSLSHLEASH-FP-LERISFLDLSDNPL 448
++P L + T+L+ L N +S LEA+ F L + ++LS+N L
Sbjct: 516 TKIPPHLPEHTTDLR---LNDNEISILEATGAFKKLPNLRKINLSNNKL 561
Score = 68 (29.0 bits), Expect = 8.9e-15, Sum P(4) = 8.9e-15
Identities = 19/58 (32%), Positives = 32/58 (55%)
Query: 391 ETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFPLERISFLDLSDNPL 448
ETV+ N L+ LP + + T L L+GN L+ + L++++ LDLS+N +
Sbjct: 726 ETVVRCSNRGLRSLPKTIPKDTTELY---LEGNLLTSVPKELPNLKQLTLLDLSNNSI 780
Score = 68 (29.0 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 30/136 (22%), Positives = 49/136 (36%)
Query: 147 HLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNE 206
H L L+ N I+ E + F L +LR + L NN++ D+ + L L
Sbjct: 525 HTTDLRLNDNEISILEATGAFKKLPNLRKINLSNNKLRDIREGAFDGAG--GVLELLLTG 582
Query: 207 NLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQL 266
N +++V F L L TL L L ++ I
Sbjct: 583 NKLQSVSGRMFK-GLIGLKTLMLRSNQISCVDNATFTGLSSVRLLSLYDNRISTIAPGAF 641
Query: 267 SKLSALVNLDLSGNNF 282
+ L +L ++L N +
Sbjct: 642 NTLHSLSTINLLSNPY 657
Score = 57 (25.1 bits), Expect = 4.1e-13, Sum P(3) = 4.1e-13
Identities = 13/37 (35%), Positives = 22/37 (59%)
Query: 260 AIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSL 296
++P K+L L L LDLS N+ S++ + F ++ L
Sbjct: 759 SVP-KELPNLKQLTLLDLSNNSISHLAPLTFSNMTQL 794
Score = 53 (23.7 bits), Expect = 5.8e-20, Sum P(3) = 5.8e-20
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 505 LTIVLNNLKCSSPPDIKGLEVKAVPENSVHCESN 538
LT LN +C P D+ L K P + C++N
Sbjct: 889 LTTPLNRFQCKGPADLN-LMSKCAPCLATPCQNN 921
Score = 52 (23.4 bits), Expect = 3.5e-13, Sum P(4) = 3.5e-13
Identities = 20/63 (31%), Positives = 31/63 (49%)
Query: 392 TVIINENMNLKQLPSKLFQGNTNLKSVSL---KGNSLSHLEASHFP-LERISFLDLSDNP 447
T + E L +P +L NLK ++L NS+SHL F + +++ L LS N
Sbjct: 748 TELYLEGNLLTSVPKEL----PNLKQLTLLDLSNNSISHLAPLTFSNMTQLATLILSYNQ 803
Query: 448 LHC 450
+ C
Sbjct: 804 IRC 806
Score = 51 (23.0 bits), Expect = 3.3e-19, Sum P(4) = 3.3e-19
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 496 DRIIKNNHSLTIVLNNLKCSSPPDIKG 522
D +NN + +NN C PP+ KG
Sbjct: 995 DNDCENNSTCVDGINNYTCVCPPNYKG 1021
Score = 47 (21.6 bits), Expect = 2.1e-19, Sum P(4) = 2.1e-19
Identities = 12/40 (30%), Positives = 22/40 (55%)
Query: 272 LVNLDLSGNNFSNIDSVAFKSLFSLK--LVKINLIPNLDS 309
++ L L+GN ++ FK L LK +++ N I +D+
Sbjct: 575 VLELLLTGNKLQSVSGRMFKGLIGLKTLMLRSNQISCVDN 614
Score = 43 (20.2 bits), Expect = 2.1e-18, Sum P(4) = 2.1e-18
Identities = 7/24 (29%), Positives = 12/24 (50%)
Query: 513 KCSSPPDIKGLEVKAVPENSVHCE 536
+C+ PPD+ + P N C+
Sbjct: 876 RCTGPPDMADRLLLTTPLNRFQCK 899
Score = 38 (18.4 bits), Expect = 2.0e-18, Sum P(3) = 2.0e-18
Identities = 7/30 (23%), Positives = 14/30 (46%)
Query: 507 IVLNNLKCSSPPDIKGLEVKAVPENSVHCE 536
+V N +C P +K + ++ V C+
Sbjct: 675 VVSGNPRCQKPAFLKEIPIQDVAMPDFSCD 704
Score = 38 (18.4 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 7/23 (30%), Positives = 12/23 (52%)
Query: 513 KCSSPPDIKGLEVKAVPENSVHC 535
+C +P ++GL V V + C
Sbjct: 232 QCMAPAHMRGLNVPDVQKREFVC 254
>UNIPROTKB|E1C7Z9 [details] [associations]
symbol:E1C7Z9 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005615 "extracellular space" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0008045 "motor neuron
axon guidance" evidence=IEA] [GO:0022028 "tangential migration from
the subventricular zone to the olfactory bulb" evidence=IEA]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IEA]
[GO:0033563 "dorsal/ventral axon guidance" evidence=IEA]
[GO:0040023 "establishment of nucleus localization" evidence=IEA]
[GO:0048495 "Roundabout binding" evidence=IEA] [GO:0048846 "axon
extension involved in axon guidance" evidence=IEA] [GO:0050919
"negative chemotaxis" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005737 GO:GO:0005615 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 InterPro:IPR025875
Pfam:PF12799 Pfam:PF01463 GeneTree:ENSGT00700000104083
GO:GO:0050919 EMBL:AADN02046435 EMBL:AADN02046436 EMBL:AADN02046437
EMBL:AADN02046438 EMBL:AADN02046439 EMBL:AADN02046440
EMBL:AADN02046441 EMBL:AADN02046442 IPI:IPI00823289
Ensembl:ENSGALT00000012327 Uniprot:E1C7Z9
Length = 819
Score = 212 (79.7 bits), Expect = 6.4e-20, Sum P(3) = 6.4e-20
Identities = 59/199 (29%), Positives = 95/199 (47%)
Query: 8 IFLILALTKLNKAICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVH 67
+ +AL + A CP C C ++ C L VP + + + L N I+ +H
Sbjct: 27 LLAFVALCRGRAAACPPLCACSGTTVD--CHGTALRAVPKSIPRGTERLELNGNNITRIH 84
Query: 68 YT-LSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKT 126
S +LR L L N+I+V+ F+ +L L ++ N++ L + F+ + L
Sbjct: 85 KNDFSGLKQLRVLQLMENQISVVERGAFDDMKELERLRLNRNQLHTLPELLFQHNQALSR 144
Query: 127 LDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDV 186
LDLS N I I + AFR L+ L L N I+ ED F +L+ L +L L+NN I +
Sbjct: 145 LDLSENFIQAIPRKAFRGATDLKNLQLDKNQISCIEDGA-FRALRGLEVLTLNNNNITSI 203
Query: 187 PNNVLSNLPHQSLHYLYLN 205
P + +++P L+ N
Sbjct: 204 PVSSFNHMPKLRTFRLHSN 222
Score = 170 (64.9 bits), Expect = 7.0e-12, Sum P(3) = 7.0e-12
Identities = 58/176 (32%), Positives = 87/176 (49%)
Query: 14 LTKLNKAICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRE-NRISNVHY-TLS 71
L L+ CP+ C C + ++ C GL +P L PE T I E N I ++ S
Sbjct: 281 LCSLSSGSCPAMCTCSNGIVD--CRGKGLTAIPANL-PETMTEIRLELNGIKSIPPGAFS 337
Query: 72 FYIELRSL------DLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELK 125
Y +LR + DLS N+I+ + F+ L +L + N+I+ L K F GL L+
Sbjct: 338 PYKKLRRILPLGFRDLSNNQISEIAPDAFQGLRSLNSLVLYGNKITDLPKGVFGGLFALQ 397
Query: 126 TLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNN 181
L L+ NKI+ + AF+D +L LL L N I F+SL++++ L L N
Sbjct: 398 LLLLNANKINCVRADAFQDLQNLSLLSLYDNKIQSLAKGT-FTSLRAIQTLHLAQN 452
Score = 166 (63.5 bits), Expect = 8.5e-15, Sum P(3) = 8.5e-15
Identities = 46/133 (34%), Positives = 71/133 (53%)
Query: 52 EVQTIILRENRISNVHY-TLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEI 110
+++ + L EN+IS V EL L L+ N+++ L F++ L L++S N I
Sbjct: 93 QLRVLQLMENQISVVERGAFDDMKELERLRLNRNQLHTLPELLFQHNQALSRLDLSENFI 152
Query: 111 SALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSL 170
A+ + F+G +LK L L N+IS I AFR LE+L L+ NNIT S F+ +
Sbjct: 153 QAIPRKAFRGATDLKNLQLDKNQISCIEDGAFRALRGLEVLTLNNNNITSIPVSS-FNHM 211
Query: 171 KSLRILKLDNNQI 183
LR +L +N +
Sbjct: 212 PKLRTFRLHSNHL 224
Score = 137 (53.3 bits), Expect = 1.3e-11, Sum P(3) = 1.3e-11
Identities = 41/127 (32%), Positives = 62/127 (48%)
Query: 103 LNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFE 162
L ++ N I+ + K+ F GLK+L+ L L N+ISV+ + AF D LE L L+ N +
Sbjct: 73 LELNGNNITRIHKNDFSGLKQLRVLQLMENQISVVERGAFDDMKELERLRLNRNQLHTLP 132
Query: 163 DSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLT 222
+ +F ++L L L N I +P L L L++N I + D +F L
Sbjct: 133 EL-LFQHNQALSRLDLSENFIQAIPRKAFRGAT--DLKNLQLDKNQISCIEDGAFR-ALR 188
Query: 223 NLHTLAL 229
L L L
Sbjct: 189 GLEVLTL 195
Score = 112 (44.5 bits), Expect = 6.4e-20, Sum P(3) = 6.4e-20
Identities = 36/111 (32%), Positives = 51/111 (45%)
Query: 345 DLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNLKQ 403
DLS N S I AF+ L SL + L N + + + F L+ +++N N +
Sbjct: 352 DLSNNQISEIAPDAFQGLRSLN--SLVLYGNKITDLPKGVFGGLFALQLLLLNAN-KINC 408
Query: 404 LPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPLHCDCN 453
+ + FQ NL +SL N + L F L I L L+ NP CDCN
Sbjct: 409 VRADAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQNPFVCDCN 459
Score = 100 (40.3 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 46/138 (33%), Positives = 60/138 (43%)
Query: 121 LKELKT-LDLSYNKISVINKTAFRDTLHLE-LLILSFNNITYFEDSEI----FSSLKSLR 174
L E T + L N I I AF L +L L F +++ + SEI F L+SL
Sbjct: 314 LPETMTEIRLELNGIKSIPPGAFSPYKKLRRILPLGFRDLSNNQISEIAPDAFQGLRSLN 373
Query: 175 ILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXX 234
L L N+I D+P V L +L L LN N I V ++F L NL L+L
Sbjct: 374 SLVLYGNKITDLPKGVFGGL--FALQLLLLNANKINCVRADAFQ-DLQNLSLLSLYDNKI 430
Query: 235 XXXXXXXXVTLR---TLH 249
+LR TLH
Sbjct: 431 QSLAKGTFTSLRAIQTLH 448
Score = 87 (35.7 bits), Expect = 2.0e-06, Sum P(3) = 2.0e-06
Identities = 38/135 (28%), Positives = 54/135 (40%)
Query: 176 LKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXX 235
L+L+ N I + N S L + L L L EN I V +F + L L L
Sbjct: 73 LELNGNNITRIHKNDFSGL--KQLRVLQLMENQISVVERGAFD-DMKELERLRLNRNQLH 129
Query: 236 XXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFS 295
+ L AIP K + L NL L N S I+ AF++L
Sbjct: 130 TLPELLFQHNQALSRLDLSENFIQAIPRKAFRGATDLKNLQLDKNQISCIEDGAFRALRG 189
Query: 296 LKLVKINLIPNLDSI 310
L+++ +N N+ SI
Sbjct: 190 LEVLTLNN-NNITSI 203
Score = 79 (32.9 bits), Expect = 4.9e-18, Sum P(4) = 4.9e-18
Identities = 27/111 (24%), Positives = 51/111 (45%)
Query: 343 RLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFVDNIQLETVIINENMNLK 402
+++LS N S I+ + + + P L + A QL+ + + N +
Sbjct: 582 KINLSNNKVSEIEGIHHAGAIGTNVGPLWGHP-LPASRAGAVFCWAQLQPLGMLRNNRIS 640
Query: 403 QLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPLHCDC 452
+ + F G N++ +SL N +S + F L+ +S L+L NP +C+C
Sbjct: 641 CIHNDSFTGLRNVRLLSLYDNQISTIAPGAFDTLQSLSTLNLLANPFNCNC 691
Score = 58 (25.5 bits), Expect = 6.4e-16, Sum P(4) = 6.4e-16
Identities = 20/87 (22%), Positives = 40/87 (45%)
Query: 337 GTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFVDNIQLETVIIN 396
G + L L GN +++ F LF+L+L+ +N ++ + AF D L + +
Sbjct: 368 GLRSLNSLVLYGNKITDLPKGVFGGLFALQLLLLNA-NKINCVRADAFQDLQNLSLLSLY 426
Query: 397 ENMNLKQLPSKLFQGNTNLKSVSLKGN 423
+N ++ L F ++++ L N
Sbjct: 427 DN-KIQSLAKGTFTSLRAIQTLHLAQN 452
Score = 57 (25.1 bits), Expect = 6.4e-16, Sum P(3) = 6.4e-16
Identities = 17/61 (27%), Positives = 29/61 (47%)
Query: 390 LETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFPLERISFLDLSDNPLH 449
L+TV+ N +LK LP + + N+ + L GN + + + + + LS N L
Sbjct: 755 LDTVVRCSNKHLKALPRGIPK---NVTELYLDGNQFTQVPGQLSTFKYLQLVILSYNSLQ 811
Query: 450 C 450
C
Sbjct: 812 C 812
Score = 53 (23.7 bits), Expect = 4.9e-18, Sum P(4) = 4.9e-18
Identities = 15/35 (42%), Positives = 19/35 (54%)
Query: 262 PTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSL 296
P K+L ++ L DLS N S I AF+ L SL
Sbjct: 338 PYKKLRRILPLGFRDLSNNQISEIAPDAFQGLRSL 372
Score = 52 (23.4 bits), Expect = 6.2e-18, Sum P(4) = 6.2e-18
Identities = 12/34 (35%), Positives = 21/34 (61%)
Query: 269 LSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
L +L +L L GN +++ F LF+L+L+ +N
Sbjct: 369 LRSLNSLVLYGNKITDLPKGVFGGLFALQLLLLN 402
Score = 50 (22.7 bits), Expect = 5.0e-14, Sum P(2) = 5.0e-14
Identities = 7/23 (30%), Positives = 14/23 (60%)
Query: 513 KCSSPPDIKGLEVKAVPENSVHC 535
+C++P ++GL V + +N C
Sbjct: 248 QCAAPAQLRGLNVAEIQKNEFSC 270
Score = 41 (19.5 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 13/35 (37%), Positives = 16/35 (45%)
Query: 171 KSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLN 205
K++ L LD NQ VP LS + L L N
Sbjct: 775 KNVTELYLDGNQFTQVPGQ-LSTFKYLQLVILSYN 808
Score = 38 (18.4 bits), Expect = 2.3e-12, Sum P(3) = 2.3e-12
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 470 ETTT-VAYEMTSNTSISPGTTTEAQRVDRII 499
ET T + E+ SI PG + +++ RI+
Sbjct: 316 ETMTEIRLELNGIKSIPPGAFSPYKKLRRIL 346
Score = 37 (18.1 bits), Expect = 6.4e-20, Sum P(3) = 6.4e-20
Identities = 8/30 (26%), Positives = 14/30 (46%)
Query: 507 IVLNNLKCSSPPDIKGLEVKAVPENSVHCE 536
IV N +C P ++ + ++ V CE
Sbjct: 705 IVTGNPRCQHPDFLRQIPLQDVAFPDFRCE 734
>UNIPROTKB|F1LRE2 [details] [associations]
symbol:Igfals "Insulin-like growth factor-binding protein
complex acid labile subunit" species:10116 "Rattus norvegicus"
[GO:0005634 "nucleus" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
RGD:68429 GO:GO:0005634 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GeneTree:ENSGT00690000101816 IPI:IPI00202416
OMA:FCGLGEL Ensembl:ENSRNOT00000020233 ArrayExpress:F1LRE2
Uniprot:F1LRE2
Length = 602
Score = 246 (91.7 bits), Expect = 7.1e-20, Sum P(2) = 7.1e-20
Identities = 98/379 (25%), Positives = 157/379 (41%)
Query: 76 LRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKIS 135
L L L N++ L F + L +L++S N + L + F+GL L L+L +N +
Sbjct: 123 LYHLHLERNRLRNLAVGLFTHTPSLASLSLSSNLLGRLEEGLFQGLSHLWDLNLGWNSLV 182
Query: 136 VINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLP 195
V+ T F+ +L L+L+ N +TY + + +F L LR L L N + V NV +LP
Sbjct: 183 VLPDTVFQGLGNLHELVLAGNKLTYLQPA-LFCGLGELRELDLSRNALRSVKANVFVHLP 241
Query: 196 HQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXX 255
L LYL+ NLI V +F + L L L L LH
Sbjct: 242 R--LQKLYLDRNLITAVAPRAF-LGMKALRWLDLSHNRVAGLMEDTFPGLLGLHVLRLAH 298
Query: 256 XXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQXXX 315
++ + L L L L N + F+ L L+++ +N + +
Sbjct: 299 NAIASLRPRTFKDLHFLEELQLGHNRIRQLGERTFEGLGQLEVLTLN-DNQITEVRVGAF 357
Query: 316 XXXXXXXXXXXXXXAFSLTP----LGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKIN 371
P G K L L + ++ F L L+ ++
Sbjct: 358 SGLFNVAVMNLSGNCLRSLPERVFQGLDKLHSLHLEHSCLGHVRLHTFAGLSGLR--RLF 415
Query: 372 LIPN-LDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEA 430
L N + SI++++ +L + + N L LP +LFQG +L+ + L N L+ L A
Sbjct: 416 LRDNSISSIEEQSLAGLSELLELDLTTN-RLTHLPRQLFQGLGHLEYLLLSYNQLTTLSA 474
Query: 431 SHF-PLERISFLDLSDNPL 448
PL+R +LD+S N L
Sbjct: 475 EVLGPLQRAFWLDISHNHL 493
Score = 177 (67.4 bits), Expect = 3.9e-12, Sum P(2) = 3.9e-12
Identities = 80/321 (24%), Positives = 135/321 (42%)
Query: 56 IILRENRISNVHYTLSFYI-ELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALS 114
++L N+++ + L + ELR LDLS N + + ++ F + +L L + N I+A++
Sbjct: 198 LVLAGNKLTYLQPALFCGLGELRELDLSRNALRSVKANVFVHLPRLQKLYLDRNLITAVA 257
Query: 115 KDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLR 174
F G+K L+ LDLS+N+++ + + F L L +L L+ N I F L L
Sbjct: 258 PRAFLGMKALRWLDLSHNRVAGLMEDTFPGLLGLHVLRLAHNAIASLRP-RTFKDLHFLE 316
Query: 175 ILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXX 234
L+L +N+I + L L L LN+N I V +F L N+ + L
Sbjct: 317 ELQLGHNRIRQLGERTFEGLGQ--LEVLTLNDNQITEVRVGAFS-GLFNVAVMNLSGNCL 373
Query: 235 XXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLF 294
L LH + + LS L L L N+ S+I+ + L
Sbjct: 374 RSLPERVFQGLDKLHSLHLEHSCLGHVRLHTFAGLSGLRRLFLRDNSISSIEEQSLAGLS 433
Query: 295 SLKLVKINLIPN-LDSIDQXXXXXXXXXXXXXXXX---XAFSLTPLGTL-KCDRLDLSGN 349
+L++++L N L + + S LG L + LD+S N
Sbjct: 434 --ELLELDLTTNRLTHLPRQLFQGLGHLEYLLLSYNQLTTLSAEVLGPLQRAFWLDISHN 491
Query: 350 NFSNIDSVAFKSLFSLKLVKI 370
+ + F SL L+ + +
Sbjct: 492 HLETLAEGLFSSLGRLRYLSL 512
Score = 123 (48.4 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 36/133 (27%), Positives = 69/133 (51%)
Query: 52 EVQTIILRENRISNVH-YTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEI 110
++ ++ L + + +V +T + LR L L N I+ + + ++LL L+++ N +
Sbjct: 386 KLHSLHLEHSCLGHVRLHTFAGLSGLRRLFLRDNSISSIEEQSLAGLSELLELDLTTNRL 445
Query: 111 SALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSL 170
+ L + F+GL L+ L LSYN+++ ++ L +S N++ + +FSSL
Sbjct: 446 THLPRQLFQGLGHLEYLLLSYNQLTTLSAEVLGPLQRAFWLDISHNHLETLAEG-LFSSL 504
Query: 171 KSLRILKLDNNQI 183
LR L L NN +
Sbjct: 505 GRLRYLSLRNNSL 517
Score = 121 (47.7 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 76/348 (21%), Positives = 128/348 (36%)
Query: 108 NEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIF 167
N +S++ F+ L L L+L + + + A +L L L N + +F
Sbjct: 83 NNLSSIPSAAFQNLSSLDFLNLQGSWLRSLEPQALLGLQNLYHLHLERNRLRNLAVG-LF 141
Query: 168 SSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTL 227
+ SL L L +N + + + L H L L L N + + D F L NLH L
Sbjct: 142 THTPSLASLSLSSNLLGRLEEGLFQGLSH--LWDLNLGWNSLVVLPDTVFQ-GLGNLHEL 198
Query: 228 ALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDS 287
L L L ++ L L L L N + +
Sbjct: 199 VLAGNKLTYLQPALFCGLGELRELDLSRNALRSVKANVFVHLPRLQKLYLDRNLITAVAP 258
Query: 288 VAFKSLFSLKLVKI--NLIPNLDSIDQXXXXXXXXXXXXXXXXXAFSLTPLGTLK----C 341
AF + +L+ + + N + L ++ SL P T K
Sbjct: 259 RAFLGMKALRWLDLSHNRVAGL--MEDTFPGLLGLHVLRLAHNAIASLRPR-TFKDLHFL 315
Query: 342 DRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFVDNIQLETVIINENMNL 401
+ L L N + F+ L L+++ +N + + AF + + ++ N L
Sbjct: 316 EELQLGHNRIRQLGERTFEGLGQLEVLTLN-DNQITEVRVGAFSGLFNVAVMNLSGNC-L 373
Query: 402 KQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPL 448
+ LP ++FQG L S+ L+ + L H+ F L + L L DN +
Sbjct: 374 RSLPERVFQGLDKLHSLHLEHSCLGHVRLHTFAGLSGLRRLFLRDNSI 421
Score = 119 (46.9 bits), Expect = 8.5e-06, Sum P(2) = 8.5e-06
Identities = 38/130 (29%), Positives = 64/130 (49%)
Query: 53 VQTIILRENRISNVH-YTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEIS 111
++ + LR+N IS++ +L+ EL LDL+ N++ L F+ L L +SYN+++
Sbjct: 411 LRRLFLRDNSISSIEEQSLAGLSELLELDLTTNRLTHLPRQLFQGLGHLEYLLLSYNQLT 470
Query: 112 ALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLK 171
LS + L+ LD+S+N + + + F L L L N++ + FS
Sbjct: 471 TLSAEVLGPLQRAFWLDISHNHLETLAEGLFSSLGRLRYLSLRNNSL------QTFSPQP 524
Query: 172 SLRILKLDNN 181
L L LD N
Sbjct: 525 GLERLWLDAN 534
Score = 65 (27.9 bits), Expect = 7.1e-20, Sum P(2) = 7.1e-20
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 510 NNLKCSSPPDIKGLEVKAVPENS-VHC 535
NN+ C+ P ++ GL+++ V E VHC
Sbjct: 576 NNITCAGPANVSGLDLRDVSETHFVHC 602
>UNIPROTKB|F1LS74 [details] [associations]
symbol:Slit1 "Slit homolog 1 protein" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
RGD:69307 GO:GO:0005737 GO:GO:0005615 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0008045
PROSITE:PS01186 InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274
SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 GO:GO:0048846 Pfam:PF12661 GO:GO:0033563 Pfam:PF01463
GeneTree:ENSGT00700000104083 GO:GO:0022028 GO:GO:0050919
IPI:IPI00389760 Ensembl:ENSRNOT00000034758 ArrayExpress:F1LS74
Uniprot:F1LS74
Length = 1417
Score = 184 (69.8 bits), Expect = 7.7e-20, Sum P(4) = 7.7e-20
Identities = 57/170 (33%), Positives = 86/170 (50%)
Query: 17 LNKAICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRE-NRISNVHY-TLSFYI 74
L+ CP+ C C + ++ C GL +P L PE T I E N I ++ S Y
Sbjct: 163 LSSGSCPAMCSCSNGIVD--CRGKGLTAIPANL-PETMTEIRLELNGIKSIPPGAFSPYR 219
Query: 75 ELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKI 134
+LR +DLS N+I + F+ L +L + N+I+ L + F GL L+ L L+ NKI
Sbjct: 220 KLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLNANKI 279
Query: 135 SVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQIL 184
+ I AF+D +L LL L N I F+SL++++ L L N +
Sbjct: 280 NCIRPDAFQDLQNLSLLSLYDNKIQSLAKGT-FTSLRAIQTLHLAQNPFI 328
Score = 170 (64.9 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 41/135 (30%), Positives = 68/135 (50%)
Query: 22 CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSFYIELRSLDL 81
CP C C D + C++ L+ +P + V + L N+ + V LS + L+ +DL
Sbjct: 620 CPQECACLDTVVR--CSNKHLQALPKGIPKNVTELYLDGNQFTLVPGQLSTFKYLQLVDL 677
Query: 82 SVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTA 141
S NKI+ L + +F ++L L +SYN + + F+GL+ L+ L L N +S + +
Sbjct: 678 SNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLHGNDVSTLQEGI 737
Query: 142 FRDTLHLELLILSFN 156
F D L L + N
Sbjct: 738 FADVTSLSHLAIGAN 752
Score = 169 (64.5 bits), Expect = 2.6e-17, Sum P(3) = 2.6e-17
Identities = 46/159 (28%), Positives = 80/159 (50%)
Query: 22 CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSF--YIELRSL 79
CP +C+C +E C+ L +P ++ + L N IS + T F L+ +
Sbjct: 399 CPHKCRCEASVVE--CSGLKLSKIPERIPQSTTELRLNNNEISILEATGLFKKLSHLKKI 456
Query: 80 DLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINK 139
+LS NK++ + FE + L+++ N++ ++ F+GL L+TL L N+IS I+
Sbjct: 457 NLSNNKVSEIEDGTFEGATSVSELHLTANQLESVRSGMFRGLDGLRTLMLRNNRISCIHN 516
Query: 140 TAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKL 178
+F ++ LL L N+IT F +L++L L L
Sbjct: 517 DSFTGLRNVRLLSLYDNHITTISPGA-FDTLQALSTLNL 554
Score = 148 (57.2 bits), Expect = 7.0e-16, Sum P(4) = 7.0e-16
Identities = 37/103 (35%), Positives = 57/103 (55%)
Query: 81 LSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKT 140
L+ N++ VL F+ L L++S N + A+ + F+G +LK L L N+IS I +
Sbjct: 2 LNRNQLQVLPELLFQNNQALSRLDLSENSLQAVPRKAFRGATDLKNLQLDKNQISCIEEG 61
Query: 141 AFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQI 183
AFR LE+L L+ NNIT S F+ + LR +L +N +
Sbjct: 62 AFRALRGLEVLTLNNNNITTIPVSS-FNHMPKLRTFRLHSNHL 103
Score = 133 (51.9 bits), Expect = 7.7e-20, Sum P(4) = 7.7e-20
Identities = 41/122 (33%), Positives = 65/122 (53%)
Query: 335 PLGTLK-CDRLDLSGNNFSNIDSVAFKSLFS-LKLVKINLIPNLDSIDQRAFVDNIQLET 392
P G K L L GN F+ + S F L+LV ++ + S+ +F + QL T
Sbjct: 642 PKGIPKNVTELYLDGNQFTLVPGQL--STFKYLQLVDLSN-NKISSLSNSSFTNMSQLTT 698
Query: 393 VIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPLHCD 451
+I++ N L+ +P FQG +L+ +SL GN +S L+ F + +S L + NPL+CD
Sbjct: 699 LILSYNA-LQCIPPLAFQGLRSLRLLSLHGNDVSTLQEGIFADVTSLSHLAIGANPLYCD 757
Query: 452 CN 453
C+
Sbjct: 758 CH 759
Score = 125 (49.1 bits), Expect = 1.9e-13, Sum P(4) = 1.9e-13
Identities = 30/101 (29%), Positives = 53/101 (52%)
Query: 105 ISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDS 164
++ N++ L + F+ + L LDLS N + + + AFR L+ L L N I+ E+
Sbjct: 2 LNRNQLQVLPELLFQNNQALSRLDLSENSLQAVPRKAFRGATDLKNLQLDKNQISCIEEG 61
Query: 165 EIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLN 205
F +L+ L +L L+NN I +P + +++P L+ N
Sbjct: 62 A-FRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSN 101
Score = 116 (45.9 bits), Expect = 2.7e-13, Sum P(3) = 2.7e-13
Identities = 37/116 (31%), Positives = 53/116 (45%)
Query: 340 KCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINEN 398
K R+DLS N + I AF+ L SL + L N + + + F L+ +++N N
Sbjct: 220 KLRRIDLSNNQIAEIAPDAFQGLRSLN--SLVLYGNKITDLPRGVFGGLYTLQLLLLNAN 277
Query: 399 MNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPLHCDCN 453
+ + FQ NL +SL N + L F L I L L+ NP CDCN
Sbjct: 278 -KINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQNPFICDCN 332
Score = 107 (42.7 bits), Expect = 0.00039, Sum P(3) = 0.00039
Identities = 28/86 (32%), Positives = 47/86 (54%)
Query: 122 KELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNN 181
K L+ +DLS NKIS ++ ++F + L LILS+N + F L+SLR+L L N
Sbjct: 670 KYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLA-FQGLRSLRLLSLHGN 728
Query: 182 QILDVPNNVLSNLPHQSLHYLYLNEN 207
+ + + +++ SL +L + N
Sbjct: 729 DVSTLQEGIFADVT--SLSHLAIGAN 752
Score = 103 (41.3 bits), Expect = 7.0e-16, Sum P(3) = 7.0e-16
Identities = 30/112 (26%), Positives = 58/112 (51%)
Query: 343 RLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNL 401
+++LS N S I+ F+ S+ +++L N L+S+ F L T+++ N +
Sbjct: 455 KINLSNNKVSEIEDGTFEGATSVS--ELHLTANQLESVRSGMFRGLDGLRTLMLRNN-RI 511
Query: 402 KQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPLHCDC 452
+ + F G N++ +SL N ++ + F L+ +S L+L NP +C+C
Sbjct: 512 SCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDTLQALSTLNLLANPFNCNC 563
Score = 103 (41.3 bits), Expect = 2.3e-10, Sum P(3) = 2.3e-10
Identities = 34/109 (31%), Positives = 53/109 (48%)
Query: 53 VQTIILRENRISNVHY-TLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEIS 111
++ I L N++S + T + L L+ N++ + S F + L L + N IS
Sbjct: 453 LKKINLSNNKVSEIEDGTFEGATSVSELHLTANQLESVRSGMFRGLDGLRTLMLRNNRIS 512
Query: 112 ALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLH----LELLILSFN 156
+ D+F GL+ ++ L L N I+ I+ AF DTL L LL FN
Sbjct: 513 CIHNDSFTGLRNVRLLSLYDNHITTISPGAF-DTLQALSTLNLLANPFN 560
Score = 102 (41.0 bits), Expect = 5.2e-14, Sum P(5) = 5.2e-14
Identities = 43/133 (32%), Positives = 55/133 (41%)
Query: 121 LKELKT-LDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLD 179
L E T + L N I I AF L + LS N I + F L+SL L L
Sbjct: 193 LPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAP-DAFQGLRSLNSLVLY 251
Query: 180 NNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXX 239
N+I D+P V L +L L LN N I + ++F L NL L+L
Sbjct: 252 GNKITDLPRGVFGGL--YTLQLLLLNANKINCIRPDAFQ-DLQNLSLLSLYDNKIQSLAK 308
Query: 240 XXXVTLR---TLH 249
+LR TLH
Sbjct: 309 GTFTSLRAIQTLH 321
Score = 98 (39.6 bits), Expect = 8.9e-11, Sum P(4) = 8.9e-11
Identities = 25/83 (30%), Positives = 40/83 (48%)
Query: 76 LRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKIS 135
L LDLS N + + F L NL + N+IS + + F+ L+ L+ L L+ N I+
Sbjct: 21 LSRLDLSENSLQAVPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNIT 80
Query: 136 VINKTAFRDTLHLELLILSFNNI 158
I ++F L L N++
Sbjct: 81 TIPVSSFNHMPKLRTFRLHSNHL 103
Score = 96 (38.9 bits), Expect = 2.9e-12, Sum P(4) = 2.9e-12
Identities = 39/161 (24%), Positives = 62/161 (38%)
Query: 123 ELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQ 182
E ++ S K+S I + + T L L + N I+ E + +F L L+ + L NN+
Sbjct: 406 EASVVECSGLKLSKIPERIPQSTTELRL---NNNEISILEATGLFKKLSHLKKINLSNNK 462
Query: 183 ILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXX 242
+ ++ + S+ L+L N +E+V F L L TL L
Sbjct: 463 VSEIEDGTFEGAT--SVSELHLTANQLESVRSGMFR-GLDGLRTLMLRNNRISCIHNDSF 519
Query: 243 VTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFS 283
LR + I L AL L+L N F+
Sbjct: 520 TGLRNVRLLSLYDNHITTISPGAFDTLQALSTLNLLANPFN 560
Score = 80 (33.2 bits), Expect = 5.3e-09, Sum P(4) = 5.3e-09
Identities = 30/101 (29%), Positives = 47/101 (46%)
Query: 129 LSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPN 188
L+ N++ V+ + F++ L L LS N++ + F L+ L+LD NQI +
Sbjct: 2 LNRNQLQVLPELLFQNNQALSRLDLSENSLQAVP-RKAFRGATDLKNLQLDKNQISCIEE 60
Query: 189 NVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLAL 229
L + L L LN N I T+ +SF + L T L
Sbjct: 61 GAFRAL--RGLEVLTLNNNNITTIPVSSFNH-MPKLRTFRL 98
Score = 68 (29.0 bits), Expect = 5.2e-14, Sum P(5) = 5.2e-14
Identities = 24/97 (24%), Positives = 44/97 (45%)
Query: 42 LEVVP---IQLNPEVQTIILRENRISNV-HYTLSFYIELRSLDLSVNKINVLGSHNFEYQ 97
L+V+P Q N + + L EN + V +L++L L N+I+ + F
Sbjct: 7 LQVLPELLFQNNQALSRLDLSENSLQAVPRKAFRGATDLKNLQLDKNQISCIEEGAFRAL 66
Query: 98 NKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKI 134
L L ++ N I+ + +F + +L+T L N +
Sbjct: 67 RGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHL 103
Score = 64 (27.6 bits), Expect = 1.9e-06, Sum P(3) = 1.9e-06
Identities = 15/43 (34%), Positives = 24/43 (55%)
Query: 260 AIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
A+P K + L NL L N S I+ AF++L L+++ +N
Sbjct: 33 AVPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLN 75
Score = 58 (25.5 bits), Expect = 2.6e-11, Sum P(3) = 2.6e-11
Identities = 18/62 (29%), Positives = 34/62 (54%)
Query: 168 SSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTL 227
S+ K L+++ L NN+I + N+ +N+ L L L+ N ++ + +F L +L L
Sbjct: 667 STFKYLQLVDLSNNKISSLSNSSFTNM--SQLTTLILSYNALQCIPPLAFQ-GLRSLRLL 723
Query: 228 AL 229
+L
Sbjct: 724 SL 725
Score = 55 (24.4 bits), Expect = 4.8e-08, Sum P(4) = 4.8e-08
Identities = 20/87 (22%), Positives = 40/87 (45%)
Query: 337 GTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFVDNIQLETVIIN 396
G + L L GN +++ F L++L+L+ +N ++ I AF D L + +
Sbjct: 241 GLRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLNA-NKINCIRPDAFQDLQNLSLLSLY 299
Query: 397 ENMNLKQLPSKLFQGNTNLKSVSLKGN 423
+N ++ L F ++++ L N
Sbjct: 300 DN-KIQSLAKGTFTSLRAIQTLHLAQN 325
Score = 53 (23.7 bits), Expect = 8.3e-12, Sum P(4) = 8.3e-12
Identities = 15/59 (25%), Positives = 30/59 (50%)
Query: 390 LETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFPLERISFLDLSDNPL 448
L+TV+ N +L+ LP + + N+ + L GN + + + + +DLS+N +
Sbjct: 627 LDTVVRCSNKHLQALPKGIPK---NVTELYLDGNQFTLVPGQLSTFKYLQLVDLSNNKI 682
Score = 53 (23.7 bits), Expect = 8.4e-11, Sum P(3) = 8.4e-11
Identities = 15/59 (25%), Positives = 26/59 (44%)
Query: 244 TLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
T + L ++ + +S L L LS N I +AF+ L SL+L+ ++
Sbjct: 668 TFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLH 726
Score = 51 (23.0 bits), Expect = 7.7e-20, Sum P(4) = 7.7e-20
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 263 TKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSI 310
T KLS L ++LS N S I+ F+ S+ +++L N L+S+
Sbjct: 444 TGLFKKLSHLKKINLSNNKVSEIEDGTFEGATSVS--ELHLTANQLESV 490
Score = 51 (23.0 bits), Expect = 1.3e-10, Sum P(3) = 1.3e-10
Identities = 14/42 (33%), Positives = 23/42 (54%)
Query: 408 LFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPL 448
LF+ ++LK ++L N +S +E F +S L L+ N L
Sbjct: 446 LFKKLSHLKKINLSNNKVSEIEDGTFEGATSVSELHLTANQL 487
Score = 50 (22.7 bits), Expect = 8.8e-16, Sum P(4) = 8.8e-16
Identities = 14/37 (37%), Positives = 18/37 (48%)
Query: 260 AIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSL 296
+IP S L +DLS N + I AF+ L SL
Sbjct: 209 SIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSL 245
Score = 48 (22.0 bits), Expect = 1.4e-15, Sum P(4) = 1.4e-15
Identities = 11/34 (32%), Positives = 21/34 (61%)
Query: 269 LSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
L +L +L L GN +++ F L++L+L+ +N
Sbjct: 242 LRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLN 275
Score = 48 (22.0 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 513 KCSSPPDIKGLEVKAVPENSVHC 535
+CS P ++GL V V ++ C
Sbjct: 127 QCSGPASLRGLNVAEVQKSEFSC 149
Score = 47 (21.6 bits), Expect = 3.4e-10, Sum P(3) = 3.4e-10
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 265 QLSKLSALVNLDLSGNNFSNIDSVAFKSLFSL 296
QLS L +DLS N S++ + +F ++ L
Sbjct: 665 QLSTFKYLQLVDLSNNKISSLSNSSFTNMSQL 696
Score = 47 (21.6 bits), Expect = 9.0e-05, Sum P(3) = 9.0e-05
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 261 IPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
+P AL LDLS N+ + AF+ LK ++++
Sbjct: 10 LPELLFQNNQALSRLDLSENSLQAVPRKAFRGATDLKNLQLD 51
Score = 46 (21.3 bits), Expect = 7.7e-20, Sum P(4) = 7.7e-20
Identities = 6/24 (25%), Positives = 13/24 (54%)
Query: 513 KCSSPPDIKGLEVKAVPENSVHCE 536
+C+ PP+++G + P C+
Sbjct: 778 RCAGPPEMEGKLLLTTPAKKFECQ 801
Score = 41 (19.5 bits), Expect = 9.5e-06, Sum P(3) = 9.5e-06
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 470 ETTT-VAYEMTSNTSISPGTTTEAQRVDRI-IKNN 502
ET T + E+ SI PG + +++ RI + NN
Sbjct: 195 ETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNN 229
>UNIPROTKB|P35858 [details] [associations]
symbol:IGFALS "Insulin-like growth factor-binding protein
complex acid labile subunit" species:9606 "Homo sapiens"
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005576 "extracellular
region" evidence=NAS;TAS] [GO:0005520 "insulin-like growth factor
binding" evidence=TAS] [GO:0007165 "signal transduction"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005634 Reactome:REACT_116125 GO:GO:0007165
GO:GO:0005615 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007155 EMBL:M86826 EMBL:AF192554
EMBL:AK303146 EMBL:AC012180 EMBL:AL031724 IPI:IPI00020996
IPI:IPI00925635 PIR:A41915 RefSeq:NP_001139478.1 RefSeq:NP_004961.1
UniGene:Hs.839 ProteinModelPortal:P35858 SMR:P35858 STRING:P35858
DMDM:543800 PaxDb:P35858 PeptideAtlas:P35858 PRIDE:P35858
DNASU:3483 Ensembl:ENST00000215539 Ensembl:ENST00000415638
GeneID:3483 KEGG:hsa:3483 UCSC:uc002cmy.3 CTD:3483
GeneCards:GC16M001840 HGNC:HGNC:5468 HPA:HPA040692 HPA:HPA040948
MIM:601489 neXtProt:NX_P35858 Orphanet:140941 PharmGKB:PA29702
HOGENOM:HOG000033909 HOVERGEN:HBG000327 InParanoid:P35858
OMA:HLDRGCL OrthoDB:EOG4FFD1R PhylomeDB:P35858 GenomeRNAi:3483
NextBio:13696 ArrayExpress:P35858 Bgee:P35858 CleanEx:HS_IGFALS
Genevestigator:P35858 GermOnline:ENSG00000099769 GO:GO:0005520
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 Uniprot:P35858
Length = 605
Score = 247 (92.0 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 100/376 (26%), Positives = 152/376 (40%)
Query: 79 LDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVIN 138
L L N++ L F + L +L +S N +S L F+GL L L+L +N ++V+
Sbjct: 127 LHLERNQLRSLALGTFAHTPALASLGLSNNRLSRLEDGLFEGLGSLWDLNLGWNSLAVLP 186
Query: 139 KTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQS 198
AFR L L+L+ N + Y + + +FS L LR L L N + + NV LP
Sbjct: 187 DAAFRGLGSLRELVLAGNRLAYLQPA-LFSGLAELRELDLSRNALRAIKANVFVQLPR-- 243
Query: 199 LHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXX 258
L LYL+ NLI V +F L L L L L L
Sbjct: 244 LQKLYLDRNLIAAVAPGAF-LGLKALRWLDLSHNRVAGLLEDTFPGLLGLRVLRLSHNAI 302
Query: 259 XAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQXXXXXX 318
++ + L L L L N + +F+ L L+++ ++ L +
Sbjct: 303 ASLRPRTFKDLHFLEELQLGHNRIRQLAERSFEGLGQLEVLTLDH-NQLQEVKAGAFLGL 361
Query: 319 XXXXXXXXXXXAFSLTP----LGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIP 374
P G K L L G+ I F L L+ ++ L
Sbjct: 362 TNVAVMNLSGNCLRNLPEQVFRGLGKLHSLHLEGSCLGRIRPHTFTGLSGLR--RLFLKD 419
Query: 375 N-LDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHF 433
N L I++++ +L + + N L LP +LFQG L+ + L N L+ L A
Sbjct: 420 NGLVGIEEQSLWGLAELLELDLTSNQ-LTHLPHRLFQGLGKLEYLLLSRNRLAELPADAL 478
Query: 434 -PLERISFLDLSDNPL 448
PL+R +LD+S N L
Sbjct: 479 GPLQRAFWLDVSHNRL 494
Score = 207 (77.9 bits), Expect = 3.8e-15, Sum P(2) = 3.8e-15
Identities = 97/398 (24%), Positives = 165/398 (41%)
Query: 58 LRENRISNVHY-TLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKD 116
L N++ ++ T + L SL LS N+++ L FE L +LN+ +N ++ L
Sbjct: 129 LERNQLRSLALGTFAHTPALASLGLSNNRLSRLEDGLFEGLGSLWDLNLGWNSLAVLPDA 188
Query: 117 TFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRIL 176
F+GL L+ L L+ N+++ + F L L LS N + + + +F L L+ L
Sbjct: 189 AFRGLGSLRELVLAGNRLAYLQPALFSGLAELRELDLSRNALRAIK-ANVFVQLPRLQKL 247
Query: 177 KLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXX 236
LD N I V L ++L +L L+ N + +L+++FP L L L L
Sbjct: 248 YLDRNLIAAVAPGAFLGL--KALRWLDLSHNRVAGLLEDTFP-GLLGLRVLRLSHNAIAS 304
Query: 237 XXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSL 296
L L + + L L L L N + + AF L ++
Sbjct: 305 LRPRTFKDLHFLEELQLGHNRIRQLAERSFEGLGQLEVLTLDHNQLQEVKAGAFLGLTNV 364
Query: 297 KLVKI--NLIPNL-DSIDQXXXXXXXXXXXXXXXXXAFSLTPLGTLKCDRLDLSGNNFSN 353
++ + N + NL + + + T G RL L N
Sbjct: 365 AVMNLSGNCLRNLPEQVFRGLGKLHSLHLEGSCLGRIRPHTFTGLSGLRRLFLKDNGLVG 424
Query: 354 IDSVAFKSLFSL-KLVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQG 411
I+ +SL+ L +L++++L N L + R F +LE ++++ N L +LP+
Sbjct: 425 IEE---QSLWGLAELLELDLTSNQLTHLPHRLFQGLGKLEYLLLSRN-RLAELPADALGP 480
Query: 412 NTNLKSVSLKGNSLSHLEASHF-PLERISFLDLSDNPL 448
+ + N L L S PL R+ +L L +N L
Sbjct: 481 LQRAFWLDVSHNRLEALPNSLLAPLGRLRYLSLRNNSL 518
Score = 186 (70.5 bits), Expect = 2.8e-16, Sum P(3) = 2.8e-16
Identities = 72/256 (28%), Positives = 115/256 (44%)
Query: 53 VQTIILRENRISNVHYTL-SFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEIS 111
++ ++L NR++ + L S ELR LDLS N + + ++ F +L L + N I+
Sbjct: 196 LRELVLAGNRLAYLQPALFSGLAELRELDLSRNALRAIKANVFVQLPRLQKLYLDRNLIA 255
Query: 112 ALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLK 171
A++ F GLK L+ LDLS+N+++ + + F L L +L LS N I F L
Sbjct: 256 AVAPGAFLGLKALRWLDLSHNRVAGLLEDTFPGLLGLRVLRLSHNAIASLRP-RTFKDLH 314
Query: 172 SLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXX 231
L L+L +N+I + L L L L+ N ++ V +F LTN+ + L
Sbjct: 315 FLEELQLGHNRIRQLAERSFEGLGQ--LEVLTLDHNQLQEVKAGAF-LGLTNVAVMNLSG 371
Query: 232 XXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFK 291
L LH I + LS L L L N I+ +
Sbjct: 372 NCLRNLPEQVFRGLGKLHSLHLEGSCLGRIRPHTFTGLSGLRRLFLKDNGLVGIEE---Q 428
Query: 292 SLFSL-KLVKINLIPN 306
SL+ L +L++++L N
Sbjct: 429 SLWGLAELLELDLTSN 444
Score = 151 (58.2 bits), Expect = 5.9e-09, Sum P(2) = 5.9e-09
Identities = 94/379 (24%), Positives = 150/379 (39%)
Query: 77 RSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISV 136
++L L N ++ + F+ + L LN+ ++ +L GL+ L L L N++
Sbjct: 77 QALWLDGNNLSSVPPAAFQNLSSLGFLNLQGGQLGSLEPQALLGLENLCHLHLERNQLRS 136
Query: 137 INKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPH 196
+ F T L L LS N ++ ED +F L SL L L N + +P+ L
Sbjct: 137 LALGTFAHTPALASLGLSNNRLSRLEDG-LFEGLGSLWDLNLGWNSLAVLPDAAFRGLG- 194
Query: 197 QSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXX 256
SL L L N + + F L L L L V L L
Sbjct: 195 -SLRELVLAGNRLAYLQPALFS-GLAELRELDLSRNALRAIKANVFVQLPRLQKLYLDRN 252
Query: 257 XXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKI--NLIPNLDSI---D 311
A+ L AL LDLS N + + F L L+++++ N I +L D
Sbjct: 253 LIAAVAPGAFLGLKALRWLDLSHNRVAGLLEDTFPGLLGLRVLRLSHNAIASLRPRTFKD 312
Query: 312 QXXXXXXXXXXXXXXXXXAFSLTPLGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKIN 371
S LG L+ L L N + + AF L ++ ++ N
Sbjct: 313 LHFLEELQLGHNRIRQLAERSFEGLGQLEV--LTLDHNQLQEVKAGAFLGLTNVAVM--N 368
Query: 372 LIPN-LDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEA 430
L N L ++ ++ F +L ++ + E L ++ F G + L+ + LK N L +E
Sbjct: 369 LSGNCLRNLPEQVFRGLGKLHSLHL-EGSCLGRIRPHTFTGLSGLRRLFLKDNGLVGIEE 427
Query: 431 -SHFPLERISFLDLSDNPL 448
S + L + LDL+ N L
Sbjct: 428 QSLWGLAELLELDLTSNQL 446
Score = 74 (31.1 bits), Expect = 2.8e-16, Sum P(3) = 2.8e-16
Identities = 36/115 (31%), Positives = 54/115 (46%)
Query: 344 LDLSGNNFSNIDSVAFKSLFSLK--LVKINLIPNL--DSID--QRAFVDNIQLETVIINE 397
LDL+ N +++ F+ L L+ L+ N + L D++ QRAF L+ ++
Sbjct: 439 LDLTSNQLTHLPHRLFQGLGKLEYLLLSRNRLAELPADALGPLQRAF----WLD---VSH 491
Query: 398 NMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFPLERISFLDLSDNPLHCDC 452
N L+ LP+ L L+ +SL+ NSL LER L L NP C C
Sbjct: 492 N-RLEALPNSLLAPLGRLRYLSLRNNSLRTFTPQPPGLER---LWLEGNPWDCGC 542
Score = 62 (26.9 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 9/21 (42%), Positives = 17/21 (80%)
Query: 510 NNLKCSSPPDIKGLEVKAVPE 530
NN+ C+SPP++ GL+++ + E
Sbjct: 579 NNITCASPPEVVGLDLRDLSE 599
>WB|WBGene00022129 [details] [associations]
symbol:lron-11 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 SMART:SM00013 InterPro:IPR025875 Pfam:PF12799
GeneTree:ENSGT00700000104286 HSSP:P07359 EMBL:FO081276
EMBL:AF304125 RefSeq:NP_491035.1 UniGene:Cel.7069
ProteinModelPortal:G5EGE7 SMR:G5EGE7 EnsemblMetazoa:Y71F9B.8
GeneID:171837 KEGG:cel:CELE_Y71F9B.8 CTD:171837 WormBase:Y71F9B.8
OMA:AFVDNIN NextBio:872913 Uniprot:G5EGE7
Length = 542
Score = 262 (97.3 bits), Expect = 1.3e-19, P = 1.3e-19
Identities = 88/302 (29%), Positives = 134/302 (44%)
Query: 10 LILALTKLNKAICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYT 69
LIL + C S C+C K A C + L +PI L+P + L NRIS +
Sbjct: 6 LILLVLVSGVISCQSGCKC-PTKTTAVCKGSSLRSIPILLDPRTTVLDLSNNRISRLSAD 64
Query: 70 -LSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLD 128
LS Y L L L N I L + F L L++S N + +L + F LK LKTL
Sbjct: 65 ELSLYPNLEQLILHNNSITHLSADVFSTLPSLRVLDLSSNSLLSLPNEVFSKLKNLKTLI 124
Query: 129 LSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPN 188
+S N + + F L+ L ++ N +++ S + L LR L L N++L +P
Sbjct: 125 ISSNDVQ-LGPECFAGLSQLQTLSIADNRLSFLPPS-VLKPLSGLRNLDLSANKLLSMPA 182
Query: 189 NVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTL 248
+V++NL L L L +NL+ ++ F + L L + L L
Sbjct: 183 SVMNNLG--GLETLKLKQNLLSSLETGMF-LSQKELKHLDVSENLIGDIEEGALYGLEKL 239
Query: 249 HXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLD 308
+P S L AL LDLS N F ++++ +F L +L+ + I+ NL
Sbjct: 240 ETLNLTNNQLVRLPGNTWS-LPALKTLDLSSNLFVSLETASFDGLPALQYLNISHSRNLK 298
Query: 309 SI 310
+I
Sbjct: 299 TI 300
Score = 237 (88.5 bits), Expect = 8.3e-17, P = 8.3e-17
Identities = 88/334 (26%), Positives = 149/334 (44%)
Query: 127 LDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDV 186
LDLS N+IS ++ +LE LIL N+IT+ +++FS+L SLR+L L +N +L +
Sbjct: 51 LDLSNNRISRLSADELSLYPNLEQLILHNNSITHLS-ADVFSTLPSLRVLDLSSNSLLSL 109
Query: 187 PNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLR 246
PN V S L ++L L ++ N ++ + F L+ L TL++ L
Sbjct: 110 PNEVFSKL--KNLKTLIISSNDVQ-LGPECFA-GLSQLQTLSIADNRLSFLPPSVLKPLS 165
Query: 247 TLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKI--NLI 304
L ++P ++ L L L L N S++++ F S LK + + NLI
Sbjct: 166 GLRNLDLSANKLLSMPASVMNNLGGLETLKLKQNLLSSLETGMFLSQKELKHLDVSENLI 225
Query: 305 PNLDS-----IDQXXXXXXXXXXXXXXXXXAFSLTPLGTLKCDRLDLSGNNFSNIDSVAF 359
+++ +++ +SL L TL DLS N F ++++ +F
Sbjct: 226 GDIEEGALYGLEKLETLNLTNNQLVRLPGNTWSLPALKTL-----DLSSNLFVSLETASF 280
Query: 360 KSLFSLKLVKINLIPNLDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVS 419
L +L+ + I+ NL +I FV L + I+ + L + F L +
Sbjct: 281 DGLPALQYLNISHSRNLKTIQMATFVQLSSLHWLSISSSA-LTHIHPSAFNPIPPLSHLD 339
Query: 420 LKGNSLSHLEASHFPLERISFLDLSDNPLHCDCN 453
L N L ++ I L L++N HC C+
Sbjct: 340 LSNNELRYVAPGMLQWPNIRNLHLANNDWHCSCD 373
Score = 147 (56.8 bits), Expect = 6.9e-07, P = 6.9e-07
Identities = 56/192 (29%), Positives = 95/192 (49%)
Query: 47 IQLNPE-------VQTIILRENRISNVHYTLSFYIE-LRSLDLSVNKINVLGSHNFEYQN 98
+QL PE +QT+ + +NR+S + ++ + LR+LDLS NK+ + +
Sbjct: 130 VQLGPECFAGLSQLQTLSIADNRLSFLPPSVLKPLSGLRNLDLSANKLLSMPASVMNNLG 189
Query: 99 KLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNI 158
L L + N +S+L F KELK LD+S N I I + A LE L L+ N +
Sbjct: 190 GLETLKLKQNLLSSLETGMFLSQKELKHLDVSENLIGDIEEGALYGLEKLETLNLTNNQL 249
Query: 159 TYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENL-IETVLDNSF 217
+ SL +L+ L L +N + + LP +L YL ++ + ++T+ +F
Sbjct: 250 VRLPGNTW--SLPALKTLDLSSNLFVSLETASFDGLP--ALQYLNISHSRNLKTIQMATF 305
Query: 218 PFTLTNLHTLAL 229
L++LH L++
Sbjct: 306 -VQLSSLHWLSI 316
Score = 120 (47.3 bits), Expect = 0.00061, P = 0.00061
Identities = 45/175 (25%), Positives = 81/175 (46%)
Query: 53 VQTIILRENRISNVHYTLSF-YIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEIS 111
++T+ L++N +S++ + EL+ LD+S N I + KL LN++ N++
Sbjct: 191 LETLKLKQNLLSSLETGMFLSQKELKHLDVSENLIGDIEEGALYGLEKLETLNLTNNQLV 250
Query: 112 ALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLK 171
L +T+ L LKTLDLS N + +F L+ L +S + F L
Sbjct: 251 RLPGNTWS-LPALKTLDLSSNLFVSLETASFDGLPALQYLNISHSRNLKTIQMATFVQLS 309
Query: 172 SLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPF-TLTNLH 225
SL L + ++ + + + + +P L +L L+ N + V + + NLH
Sbjct: 310 SLHWLSISSSALTHIHPSAFNPIP--PLSHLDLSNNELRYVAPGMLQWPNIRNLH 362
>ZFIN|ZDB-GENE-091214-3 [details] [associations]
symbol:lingo4b "leucine rich repeat and Ig domain
containing 4b" species:7955 "Danio rerio" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 ZFIN:ZDB-GENE-091214-3 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR003591 SMART:SM00369 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 InterPro:IPR025875
Pfam:PF12799 HOVERGEN:HBG057546 EMBL:BC171652 IPI:IPI00612243
UniGene:Dr.74856 ProteinModelPortal:B7ZVN7 eggNOG:NOG299566
OMA:IVESEYA OrthoDB:EOG4NZTT6 Uniprot:B7ZVN7
Length = 604
Score = 263 (97.6 bits), Expect = 1.4e-19, P = 1.4e-19
Identities = 85/292 (29%), Positives = 129/292 (44%)
Query: 22 CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNV-HYTLSFYIELRSLD 80
CP RC C LE +C+ L VP L + + L N++ + S +L LD
Sbjct: 29 CPQRCSCSRDPLEVNCSSRHLTAVPEGLPTNAKRLDLSGNQLKTLARRQFSSLSKLEDLD 88
Query: 81 LSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKT 140
LS N I+++ F+ L L I N + L F GL L+ LD+S N+I V
Sbjct: 89 LSENIISMIEVETFQGLKNLRYLRIKNNRLKILPVGVFSGLSNLRRLDISENEILVFLDY 148
Query: 141 AFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLH 200
FRD ++L+ L N++ + F L++L+ L +D + + +P LS L QSL
Sbjct: 149 TFRDMINLQQLDAGENDLVFISQ-RAFVGLQALKELNVDRSNLTSIPTEALSQL--QSLT 205
Query: 201 YLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXA 260
L L + I + +N+F L L TL + + L A
Sbjct: 206 KLRLRKLTISVLPNNAFR-RLHQLRTLQILHWSSLEMLNSNSLVGLNLTTLVLTNCNLSA 264
Query: 261 IPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIP-NLDSID 311
IP L L+ L LDLS N ++I L L+L +++L+ NL I+
Sbjct: 265 IPYSPLRHLAYLQYLDLSYNPITSIQGNLLGDL--LRLQELHLVGGNLLQIE 314
Score = 157 (60.3 bits), Expect = 6.6e-08, P = 6.6e-08
Identities = 74/305 (24%), Positives = 126/305 (41%)
Query: 77 RSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISV 136
+ LDLS N++ L F +KL +L++S N IS + +TF+GLK L+ L + N++ +
Sbjct: 61 KRLDLSGNQLKTLARRQFSSLSKLEDLDLSENIISMIEVETFQGLKNLRYLRIKNNRLKI 120
Query: 137 INKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPH 196
+ F +L L +S N I F D F + +L+ L N ++ + L
Sbjct: 121 LPVGVFSGLSNLRRLDISENEILVFLDYT-FRDMINLQQLDAGENDLVFISQRAFVGL-- 177
Query: 197 QSLHYLYLNE-NL--IET-VLDNSFPFTLTNLHTLALXXXXXXXXXXXXXV-TLRTLHXX 251
Q+L L ++ NL I T L T L L + + TL+ LH
Sbjct: 178 QALKELNVDRSNLTSIPTEALSQLQSLTKLRLRKLTISVLPNNAFRRLHQLRTLQILHWS 237
Query: 252 XXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN--LDS 309
++ L+ L L N +LS +S + +A+ L I I L
Sbjct: 238 SLEMLNSNSLVGLNLTTL-VLTNCNLSAIPYSPLRHLAYLQYLDLSYNPITSIQGNLLGD 296
Query: 310 IDQXXXXXXXXXXXXXXXXXAFSLTPLGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVK 369
+ + AF G + L++S N S ++ AF S+ +L+ ++
Sbjct: 297 LLRLQELHLVGGNLLQIEPGAFR----GLSRFRLLNVSSNRLSTLEESAFHSVGNLQTLR 352
Query: 370 INLIP 374
++ P
Sbjct: 353 LDRNP 357
Score = 134 (52.2 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 71/292 (24%), Positives = 119/292 (40%)
Query: 167 FSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHT 226
FSSL L L L N I + L ++L YL + N ++ + F L+NL
Sbjct: 78 FSSLSKLEDLDLSENIISMIEVETFQGL--KNLRYLRIKNNRLKILPVGVFS-GLSNLRR 134
Query: 227 LALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNID 286
L + + L I + L AL L++ +N ++I
Sbjct: 135 LDISENEILVFLDYTFRDMINLQQLDAGENDLVFISQRAFVGLQALKELNVDRSNLTSIP 194
Query: 287 SVAF---KSLFSLKLVK--INLIPNLDSIDQXXXXXXXXXXXXXXXXXAFSLTPLGTLKC 341
+ A +SL L+L K I+++PN ++ + S + +G L
Sbjct: 195 TEALSQLQSLTKLRLRKLTISVLPN-NAFRRLHQLRTLQILHWSSLEMLNSNSLVG-LNL 252
Query: 342 DRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFVDNIQLETVIINENMNL 401
L L+ N S I + L L+ + ++ P + SI D ++L+ + + NL
Sbjct: 253 TTLVLTNCNLSAIPYSPLRHLAYLQYLDLSYNP-ITSIQGNLLGDLLRLQELHLVGG-NL 310
Query: 402 KQLPSKLFQGNTNLKSVSLKGNSLSHLEASHF-PLERISFLDLSDNPLHCDC 452
Q+ F+G + + +++ N LS LE S F + + L L NPL CDC
Sbjct: 311 LQIEPGAFRGLSRFRLLNVSSNRLSTLEESAFHSVGNLQTLRLDRNPLACDC 362
>ZFIN|ZDB-GENE-010306-3 [details] [associations]
symbol:slit2 "slit (Drosophila) homolog 2"
species:7955 "Danio rerio" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IMP] [GO:0033564
"anterior/posterior axon guidance" evidence=IMP] [GO:0007414
"axonal defasciculation" evidence=IMP] [GO:0001763 "morphogenesis
of a branching structure" evidence=IMP] [GO:0003262 "endocardial
progenitor cell migration to the midline involved in heart field
formation" evidence=IGI] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0030517 "negative regulation of axon extension"
evidence=IGI;IMP] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152
ZFIN:ZDB-GENE-010306-3 GO:GO:0005576 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0030517 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 HSSP:P00740 Pfam:PF12661 GO:GO:0001763
GO:GO:0007414 Pfam:PF01463 GO:GO:0033564 HOGENOM:HOG000116120
HOVERGEN:HBG057959 CTD:9353 KO:K06839 OrthoDB:EOG4D7Z4T
GO:GO:0003262 EMBL:AF210321 EMBL:CU638813 IPI:IPI00491594
RefSeq:NP_571810.1 UniGene:Dr.10489 SMR:Q9DE36 IntAct:Q9DE36
GeneID:80353 KEGG:dre:80353 NextBio:20934061 Uniprot:Q9DE36
Length = 1512
Score = 218 (81.8 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 51/137 (37%), Positives = 74/137 (54%)
Query: 20 AICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSFYIELRSL 79
A CP+ C C D + C++ GL+V+P + +V + L N + V LS Y L +
Sbjct: 708 ARCPAECSCLDTVVR--CSNKGLKVLPKGIPRDVTELYLDGNEFTQVPLELSNYKHLTLI 765
Query: 80 DLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINK 139
DLS N+I+ L +H+F ++LL L +SYN + + F GLK L+ L L N I+VI
Sbjct: 766 DLSNNQISTLSNHSFSNMSELLTLILSYNRLRCIPAKAFDGLKSLRLLSLHGNDIAVIPD 825
Query: 140 TAFRDTLHLELLILSFN 156
AF+D L L L N
Sbjct: 826 GAFKDLSSLSHLALGAN 842
Score = 192 (72.6 bits), Expect = 1.4e-19, Sum P(4) = 1.4e-19
Identities = 59/208 (28%), Positives = 96/208 (46%)
Query: 3 YFLTCIFLILALTKLNKAICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENR 62
+ L + L L CPS+C C ++ C L VP + V+ + L N
Sbjct: 2 FVLKSVVLCALLCGAGAQSCPSQCSCSGTAVD--CHGQSLRSVPRNIPRNVERLDLNANN 59
Query: 63 ISNVHYT-LSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGL 121
++ + + LR L L NKI+ + F+ +L L ++ N + L + F G
Sbjct: 60 LTKITKADFAGLKNLRVLQLMENKISSIERGAFQDLQELERLRLNRNNLQVLPELLFLGT 119
Query: 122 KELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNN 181
+L LDLS N+I I + AFR + ++ L L +N I+ ED F +L L +L L+NN
Sbjct: 120 TKLFRLDLSENQIQGIPRKAFRGSTEIKNLQLDYNQISCIEDGA-FRALGDLEVLTLNNN 178
Query: 182 QILDVPNNVLSNLPHQSLHYLYLNENLI 209
I + +++P L+ N NL+
Sbjct: 179 NISRLSVASFNHMPKLRTFRLHSN-NLL 205
Score = 187 (70.9 bits), Expect = 7.5e-18, Sum P(3) = 7.5e-18
Identities = 53/164 (32%), Positives = 82/164 (50%)
Query: 22 CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHY-TLSFYIELRSLD 80
CP C C + ++ C GL +P L + I L +N I + + Y LR +D
Sbjct: 264 CPELCTCSNNVVD--CRGKGLTEIPTNLPETITEIRLEQNSIKIIPAGAFAPYKRLRRID 321
Query: 81 LSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKT 140
LS N+I L S +F+ L +L + N+I+ L K F GL L+ L L+ NKI+ +
Sbjct: 322 LSNNQITELASDSFQGLRSLNSLVLYGNKITELPKGLFDGLFSLQLLLLNANKINCLRVD 381
Query: 141 AFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQIL 184
+F+D +L LL L N + FSSL++++ L L N +
Sbjct: 382 SFQDLQNLNLLSLYDNKLQTIAKGT-FSSLRAIQTLHLAQNPFM 424
Score = 146 (56.5 bits), Expect = 1.5e-14, Sum P(4) = 1.5e-14
Identities = 42/127 (33%), Positives = 62/127 (48%)
Query: 103 LNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFE 162
L+++ N ++ ++K F GLK L+ L L NKIS I + AF+D LE L L+ NN+
Sbjct: 53 LDLNANNLTKITKADFAGLKNLRVLQLMENKISSIERGAFQDLQELERLRLNRNNLQVLP 112
Query: 163 DSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLT 222
+ + K R L L NQI +P + L L+ N I + D +F L
Sbjct: 113 ELLFLGTTKLFR-LDLSENQIQGIPRKAFRG--STEIKNLQLDYNQISCIEDGAFR-ALG 168
Query: 223 NLHTLAL 229
+L L L
Sbjct: 169 DLEVLTL 175
Score = 145 (56.1 bits), Expect = 2.8e-13, Sum P(3) = 2.8e-13
Identities = 46/159 (28%), Positives = 71/159 (44%)
Query: 22 CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSF--YIELRSL 79
CP +C+C + C+ L +P + + L N + + T F +LR +
Sbjct: 489 CPEKCRC--EGTTVDCSGQKLTKIPDHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKI 546
Query: 80 DLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINK 139
+LS NKI + FE + + L ++ N + + KGL L+TL L N+IS +N
Sbjct: 547 NLSNNKITDIEEGTFEGASGVNELILTSNRLEGVHYSMLKGLGGLRTLMLRSNRISCVNN 606
Query: 140 TAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKL 178
+F + LL L N IT F +L SL L L
Sbjct: 607 GSFTGLSSVRLLSLYDNLITSMSPGA-FDTLHSLSTLNL 644
Score = 128 (50.1 bits), Expect = 1.4e-19, Sum P(4) = 1.4e-19
Identities = 37/113 (32%), Positives = 62/113 (54%)
Query: 344 LDLSGNNFSNIDSVAFKSLFSLK-LVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNL 401
L L GN F+ + L + K L I+L N + ++ +F + +L T+I++ N L
Sbjct: 742 LYLDGNEFTQVPL----ELSNYKHLTLIDLSNNQISTLSNHSFSNMSELLTLILSYN-RL 796
Query: 402 KQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPLHCDCN 453
+ +P+K F G +L+ +SL GN ++ + F L +S L L NPL+CDC+
Sbjct: 797 RCIPAKAFDGLKSLRLLSLHGNDIAVIPDGAFKDLSSLSHLALGANPLYCDCH 849
Score = 112 (44.5 bits), Expect = 1.4e-17, Sum P(3) = 1.4e-17
Identities = 36/114 (31%), Positives = 56/114 (49%)
Query: 343 RLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINEN-MN 400
R+DLS N + + S +F+ L SL + L N + + + F L+ +++N N +N
Sbjct: 319 RIDLSNNQITELASDSFQGLRSLN--SLVLYGNKITELPKGLFDGLFSLQLLLLNANKIN 376
Query: 401 LKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPLHCDCN 453
++ S FQ NL +SL N L + F L I L L+ NP CDC+
Sbjct: 377 CLRVDS--FQDLQNLNLLSLYDNKLQTIAKGTFSSLRAIQTLHLAQNPFMCDCH 428
Score = 112 (44.5 bits), Expect = 7.7e-10, Sum P(3) = 7.7e-10
Identities = 47/142 (33%), Positives = 62/142 (43%)
Query: 119 KGLKELKT--------LDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSL 170
KGL E+ T + L N I +I AF L + LS N IT S+ F L
Sbjct: 280 KGLTEIPTNLPETITEIRLEQNSIKIIPAGAFAPYKRLRRIDLSNNQITELA-SDSFQGL 338
Query: 171 KSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALX 230
+SL L L N+I ++P + L SL L LN N I + +SF L NL+ L+L
Sbjct: 339 RSLNSLVLYGNKITELPKGLFDGL--FSLQLLLLNANKINCLRVDSFQ-DLQNLNLLSLY 395
Query: 231 XXXXXXXXXXXXVTLR---TLH 249
+LR TLH
Sbjct: 396 DNKLQTIAKGTFSSLRAIQTLH 417
Score = 94 (38.1 bits), Expect = 5.0e-08, Sum P(3) = 5.0e-08
Identities = 38/156 (24%), Positives = 64/156 (41%)
Query: 147 HLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNE 206
++E L L+ NN+T ++ F+ LK+LR+L+L N+I + +L Q L L LN
Sbjct: 49 NVERLDLNANNLTKITKAD-FAGLKNLRVLQLMENKISSIERGAFQDL--QELERLRLNR 105
Query: 207 NLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQL 266
N ++ + + F T T L L L + I
Sbjct: 106 NNLQVLPELLFLGT-TKLFRLDLSENQIQGIPRKAFRGSTEIKNLQLDYNQISCIEDGAF 164
Query: 267 SKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
L L L L+ NN S + +F + L+ +++
Sbjct: 165 RALGDLEVLTLNNNNISRLSVASFNHMPKLRTFRLH 200
Score = 93 (37.8 bits), Expect = 6.2e-08, Sum P(3) = 6.2e-08
Identities = 26/81 (32%), Positives = 45/81 (55%)
Query: 53 VQTIILRENRISNVHYTLSFYIE-LRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEIS 111
V +IL NR+ VHY++ + LR+L L N+I+ + + +F + + L++ N I+
Sbjct: 567 VNELILTSNRLEGVHYSMLKGLGGLRTLMLRSNRISCVNNGSFTGLSSVRLLSLYDNLIT 626
Query: 112 ALSKDTFKGLKELKTLDLSYN 132
++S F L L TL+L N
Sbjct: 627 SMSPGAFDTLHSLSTLNLLAN 647
Score = 86 (35.3 bits), Expect = 1.9e-08, Sum P(4) = 1.9e-08
Identities = 29/96 (30%), Positives = 47/96 (48%)
Query: 122 KELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNN 181
+ ++ LDL+ N ++ I K F +L +L L N I+ E F L+ L L+L+ N
Sbjct: 48 RNVERLDLNANNLTKITKADFAGLKNLRVLQLMENKISSIERGA-FQDLQELERLRLNRN 106
Query: 182 QILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSF 217
+ +P L L L L L+EN I+ + +F
Sbjct: 107 NLQVLPE--LLFLGTTKLFRLDLSENQIQGIPRKAF 140
Score = 82 (33.9 bits), Expect = 7.8e-07, Sum P(3) = 7.8e-07
Identities = 39/158 (24%), Positives = 58/158 (36%)
Query: 126 TLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILD 185
T+D S K++ I + T L L + N T E + IF L LR + L NN+I D
Sbjct: 499 TVDCSGQKLTKIPDHIPQYTAELRL---NNNEFTVLEATGIFKKLPQLRKINLSNNKITD 555
Query: 186 VPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTL 245
+ ++ L L N +E V S L L TL L L
Sbjct: 556 IEEGTFEGA--SGVNELILTSNRLEGV-HYSMLKGLGGLRTLMLRSNRISCVNNGSFTGL 612
Query: 246 RTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFS 283
++ ++ L +L L+L N F+
Sbjct: 613 SSVRLLSLYDNLITSMSPGAFDTLHSLSTLNLLANPFN 650
Score = 81 (33.6 bits), Expect = 7.5e-15, Sum P(4) = 7.5e-15
Identities = 29/106 (27%), Positives = 52/106 (49%)
Query: 344 LDLSGNNFSNIDSVA-FKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNL 401
L L+ N F+ +++ FK L L+ KINL N + I++ F + +I+ N L
Sbjct: 521 LRLNNNEFTVLEATGIFKKLPQLR--KINLSNNKITDIEEGTFEGASGVNELILTSN-RL 577
Query: 402 KQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDN 446
+ + + +G L+++ L+ N +S + F L + L L DN
Sbjct: 578 EGVHYSMLKGLGGLRTLMLRSNRISCVNNGSFTGLSSVRLLSLYDN 623
Score = 80 (33.2 bits), Expect = 5.9e-13, Sum P(3) = 5.9e-13
Identities = 31/105 (29%), Positives = 44/105 (41%)
Query: 176 LKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXX 235
L LD N+ VP LSN H +L + L+ N I T+ ++SF ++ L TL L
Sbjct: 742 LYLDGNEFTQVPLE-LSNYKHLTL--IDLSNNQISTLSNHSFS-NMSELLTLILSYNRLR 797
Query: 236 XXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGN 280
L++L IP LS+L +L L N
Sbjct: 798 CIPAKAFDGLKSLRLLSLHGNDIAVIPDGAFKDLSSLSHLALGAN 842
Score = 79 (32.9 bits), Expect = 1.2e-14, Sum P(4) = 1.2e-14
Identities = 25/113 (22%), Positives = 56/113 (49%)
Query: 343 RLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNL 401
+++LS N ++I+ F+ + ++ L N L+ + L T+++ N +
Sbjct: 545 KINLSNNKITDIEEGTFEGASGVN--ELILTSNRLEGVHYSMLKGLGGLRTLMLRSN-RI 601
Query: 402 KQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPLHCDCN 453
+ + F G ++++ +SL N ++ + F L +S L+L NP +C+C+
Sbjct: 602 SCVNNGSFTGLSSVRLLSLYDNLITSMSPGAFDTLHSLSTLNLLANPFNCNCH 654
Score = 73 (30.8 bits), Expect = 8.7e-13, Sum P(3) = 8.7e-13
Identities = 25/86 (29%), Positives = 42/86 (48%)
Query: 367 LVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSL 425
+ +I L N + I AF +L + ++ N + +L S FQG +L S+ L GN +
Sbjct: 293 ITEIRLEQNSIKIIPAGAFAPYKRLRRIDLSNNQ-ITELASDSFQGLRSLNSLVLYGNKI 351
Query: 426 SHLEASHFP-LERISFLDLSDNPLHC 450
+ L F L + L L+ N ++C
Sbjct: 352 TELPKGLFDGLFSLQLLLLNANKINC 377
Score = 69 (29.3 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 30/132 (22%), Positives = 52/132 (39%)
Query: 171 KSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALX 230
+++ L L+ N + + + L ++L L L EN I ++ +F L L L L
Sbjct: 48 RNVERLDLNANNLTKITKADFAGL--KNLRVLQLMENKISSIERGAFQ-DLQELERLRLN 104
Query: 231 XXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAF 290
+ L IP K + + NL L N S I+ AF
Sbjct: 105 RNNLQVLPELLFLGTTKLFRLDLSENQIQGIPRKAFRGSTEIKNLQLDYNQISCIEDGAF 164
Query: 291 KSLFSLKLVKIN 302
++L L+++ +N
Sbjct: 165 RALGDLEVLTLN 176
Score = 61 (26.5 bits), Expect = 1.4e-11, Sum P(3) = 1.4e-11
Identities = 17/45 (37%), Positives = 22/45 (48%)
Query: 261 IPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIP 305
IP K L +L L L GN+ + I AFK L SL + + P
Sbjct: 799 IPAKAFDGLKSLRLLSLHGNDIAVIPDGAFKDLSSLSHLALGANP 843
Score = 60 (26.2 bits), Expect = 9.5e-13, Sum P(4) = 9.5e-13
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 390 LETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSH--LEASHFPLERISFLDLSDNP 447
L+TV+ N LK LP + + T L L GN + LE S++ + ++ +DLS+N
Sbjct: 717 LDTVVRCSNKGLKVLPKGIPRDVTELY---LDGNEFTQVPLELSNY--KHLTLIDLSNNQ 771
Query: 448 L 448
+
Sbjct: 772 I 772
Score = 57 (25.1 bits), Expect = 7.4e-12, Sum P(4) = 7.4e-12
Identities = 31/115 (26%), Positives = 49/115 (42%)
Query: 337 GTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFVDNIQLETVIIN 396
G + L L GN + + F LFSL+L+ +N ++ + +F D +Q
Sbjct: 337 GLRSLNSLVLYGNKITELPKGLFDGLFSLQLLLLNA-NKINCLRVDSFQD-LQ------- 387
Query: 397 ENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFPLE-RISFL-D-LSDNPL 448
N+NL L Q SL+ HL + F + + +L D L DNP+
Sbjct: 388 -NLNLLSLYDNKLQTIAKGTFSSLRAIQTLHLAQNPFMCDCHLKWLADYLQDNPI 441
Score = 54 (24.1 bits), Expect = 1.4e-19, Sum P(4) = 1.4e-19
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 269 LSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
L +L +L L GN + + F LFSL+L+ +N
Sbjct: 338 LRSLNSLVLYGNKITELPKGLFDGLFSLQLLLLN 371
Score = 48 (22.0 bits), Expect = 5.6e-19, Sum P(4) = 5.6e-19
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 261 IPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSL 296
IP + L +DLS N + + S +F+ L SL
Sbjct: 306 IPAGAFAPYKRLRRIDLSNNQITELASDSFQGLRSL 341
Score = 46 (21.3 bits), Expect = 1.4e-17, Sum P(3) = 1.4e-17
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 507 IVLNNLKCSSPPDIKGLEVKAVPENSVHCE 536
IV N +C SP +K + ++ V CE
Sbjct: 667 IVTGNPRCQSPYFLKEIPIQDVAVQDFACE 696
Score = 46 (21.3 bits), Expect = 4.7e-10, Sum P(3) = 4.7e-10
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 265 QLSKLSALVNLDLSGNNFSNIDSVAFKSLFSL 296
+LS L +DLS N S + + +F ++ L
Sbjct: 755 ELSNYKHLTLIDLSNNQISTLSNHSFSNMSEL 786
Score = 42 (19.8 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 6/23 (26%), Positives = 12/23 (52%)
Query: 513 KCSSPPDIKGLEVKAVPENSVHC 535
+C +PP ++G + V + C
Sbjct: 228 QCMAPPSLRGHNIAEVQKKEFMC 250
Score = 38 (18.4 bits), Expect = 1.4e-19, Sum P(4) = 1.4e-19
Identities = 8/27 (29%), Positives = 12/27 (44%)
Query: 496 DRIIKNNHSLTIVLNNLKCSSPPDIKG 522
D +NN + +NN C P+ G
Sbjct: 987 DNDCENNSTCVDGINNYTCLCSPEYTG 1013
>UNIPROTKB|O75094 [details] [associations]
symbol:SLIT3 "Slit homolog 3 protein" species:9606 "Homo
sapiens" [GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IEA]
[GO:0010629 "negative regulation of gene expression" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=NAS] [GO:0005739
"mitochondrion" evidence=NAS] [GO:0005615 "extracellular space"
evidence=IDA] [GO:0048846 "axon extension involved in axon
guidance" evidence=IDA] [GO:0050919 "negative chemotaxis"
evidence=IDA] [GO:0061364 "apoptotic process involved in
luteolysis" evidence=IEP] [GO:0032870 "cellular response to hormone
stimulus" evidence=IEP] [GO:0051414 "response to cortisol stimulus"
evidence=IEP] [GO:0048495 "Roundabout binding" evidence=IPI]
[GO:0021834 "chemorepulsion involved in embryonic olfactory bulb
interneuron precursor migration" evidence=IDA] [GO:0007411 "axon
guidance" evidence=IDA;TAS] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IMP] [GO:0030308
"negative regulation of cell growth" evidence=IMP] [GO:0035385
"Roundabout signaling pathway" evidence=IMP] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005739
Reactome:REACT_111045 GO:GO:0008285 GO:GO:0005615 GO:GO:0007420
GO:GO:0030308 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887 PROSITE:PS01186
GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791 SMART:SM00282
PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 GO:GO:0048846 GO:GO:0070100 Pfam:PF12661
Pfam:PF01463 GO:GO:0051414 GO:GO:0050919 GO:GO:0035385
GO:GO:0061364 HOGENOM:HOG000116120 HOVERGEN:HBG057959
OrthoDB:EOG4D7Z4T EMBL:AB017169 EMBL:AB011538 EMBL:AY358884
EMBL:AC008409 EMBL:AC008479 EMBL:AC011365 EMBL:AC011389
EMBL:AC027311 EMBL:AC094081 EMBL:AC112165 EMBL:BC146759
EMBL:AL122074 EMBL:AF075240 IPI:IPI00409709 IPI:IPI00409710
IPI:IPI00983148 PIR:T34555 RefSeq:NP_003053.1 UniGene:Hs.604116
ProteinModelPortal:O75094 SMR:O75094 IntAct:O75094
MINT:MINT-2797284 STRING:O75094 PhosphoSite:O75094 PaxDb:O75094
PRIDE:O75094 Ensembl:ENST00000404867 Ensembl:ENST00000519560
GeneID:6586 KEGG:hsa:6586 UCSC:uc003mab.3 CTD:6586
GeneCards:GC05M168021 H-InvDB:HIX0005394 HGNC:HGNC:11087
HPA:HPA051630 MIM:603745 neXtProt:NX_O75094 PharmGKB:PA35940
InParanoid:O75094 KO:K06850 PhylomeDB:O75094 ChiTaRS:SLIT3
GenomeRNAi:6586 NextBio:25629 Bgee:O75094 CleanEx:HS_SLIT3
Genevestigator:O75094 GermOnline:ENSG00000184347 Uniprot:O75094
Length = 1523
Score = 185 (70.2 bits), Expect = 4.3e-19, Sum P(4) = 4.3e-19
Identities = 54/187 (28%), Positives = 92/187 (49%)
Query: 22 CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNV-HYTLSFYIELRSLD 80
CP++C C ++ C GL VP + + + L N I+ + + LR L
Sbjct: 34 CPTKCTCSAASVD--CHGLGLRAVPRGIPRNAERLDLDRNNITRITKMDFAGLKNLRVLH 91
Query: 81 LSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKT 140
L N+++V+ F+ +L L ++ N++ L + F+ +L LDLS N+I I +
Sbjct: 92 LEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDLSENQIQGIPRK 151
Query: 141 AFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLH 200
AFR ++ L L N+I+ ED F +L+ L IL L+NN I + +++P +
Sbjct: 152 AFRGITDVKNLQLDNNHISCIEDGA-FRALRDLEILTLNNNNISRILVTSFNHMP--KIR 208
Query: 201 YLYLNEN 207
L L+ N
Sbjct: 209 TLRLHSN 215
Score = 176 (67.0 bits), Expect = 6.8e-17, Sum P(4) = 6.8e-17
Identities = 49/165 (29%), Positives = 82/165 (49%)
Query: 18 NKAICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHY-TLSFYIEL 76
N CPS C C + ++ C GL +P L + I L +N I + + Y +L
Sbjct: 276 NSISCPSPCTCSNNIVD--CRGKGLMEIPANLPEGIVEIRLEQNSIKAIPAGAFTQYKKL 333
Query: 77 RSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISV 136
+ +D+S N+I+ + F+ L +L + N+I+ + K F GL L+ L L+ NKI+
Sbjct: 334 KRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIVKGLFDGLVSLQLLLLNANKINC 393
Query: 137 INKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNN 181
+ F+D +L LL L N + +F+ L+S++ L L N
Sbjct: 394 LRVNTFQDLQNLNLLSLYDNKLQTISKG-LFAPLQSIQTLHLAQN 437
Score = 176 (67.0 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 42/135 (31%), Positives = 67/135 (49%)
Query: 22 CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSFYIELRSLDL 81
CP +C C + + C++ GL +P + +V + L N ++ V LS L +DL
Sbjct: 725 CPEQCTCMETVVR--CSNKGLRALPRGMPKDVTELYLEGNHLTAVPRELSALRHLTLIDL 782
Query: 82 SVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTA 141
S N I++L ++ F + L L +SYN + + F GL+ L+ L L N IS + + +
Sbjct: 783 SNNSISMLTNYTFSNMSHLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGS 842
Query: 142 FRDTLHLELLILSFN 156
F D L L L N
Sbjct: 843 FNDLTSLSHLALGTN 857
Score = 164 (62.8 bits), Expect = 1.4e-15, Sum P(4) = 1.4e-15
Identities = 45/134 (33%), Positives = 74/134 (55%)
Query: 74 IELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNK 133
+E+R L N I + + F KL ++IS N+IS ++ D F+GLK L +L L NK
Sbjct: 310 VEIR---LEQNSIKAIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNK 366
Query: 134 ISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSN 193
I+ I K F + L+LL+L+ N I + F L++L +L L +N++ + + +
Sbjct: 367 ITEIVKGLFDGLVSLQLLLLNANKINCLRVNT-FQDLQNLNLLSLYDNKLQTISKGLFA- 424
Query: 194 LPHQSLHYLYLNEN 207
P QS+ L+L +N
Sbjct: 425 -PLQSIQTLHLAQN 437
Score = 159 (61.0 bits), Expect = 3.1e-16, Sum P(4) = 3.1e-16
Identities = 41/132 (31%), Positives = 71/132 (53%)
Query: 53 VQTIILRENRISNVHY-TLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEIS 111
++ + L +N++S + +L L L+ NK+ VL F+ KL L++S N+I
Sbjct: 87 LRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDLSENQIQ 146
Query: 112 ALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLK 171
+ + F+G+ ++K L L N IS I AFR LE+L L+ NNI+ + F+ +
Sbjct: 147 GIPRKAFRGITDVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTS-FNHMP 205
Query: 172 SLRILKLDNNQI 183
+R L+L +N +
Sbjct: 206 KIRTLRLHSNHL 217
Score = 154 (59.3 bits), Expect = 1.1e-15, Sum P(4) = 1.1e-15
Identities = 47/151 (31%), Positives = 74/151 (49%)
Query: 79 LDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVIN 138
LDL N I + +F L L++ N++S + + F+ LK+L+ L L+ NK+ V+
Sbjct: 66 LDLDRNNITRITKMDFAGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLP 125
Query: 139 KTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQS 198
+ F+ T L L LS N I + F + ++ L+LDNN I + + L +
Sbjct: 126 ELLFQSTPKLTRLDLSENQIQGIP-RKAFRGITDVKNLQLDNNHISCIEDGAFRAL--RD 182
Query: 199 LHYLYLNENLIETVLDNSFPFTLTNLHTLAL 229
L L LN N I +L SF + + TL L
Sbjct: 183 LEILTLNNNNISRILVTSFNH-MPKIRTLRL 212
Score = 153 (58.9 bits), Expect = 2.4e-14, Sum P(3) = 2.4e-14
Identities = 47/163 (28%), Positives = 76/163 (46%)
Query: 21 ICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSF--YIELRS 78
+CP +C+C + C++ L +P L V + L +N +S + T F LR
Sbjct: 504 VCPEKCRC--EGTIVDCSNQKLVRIPSHLPEYVTDLRLNDNEVSVLEATGIFKKLPNLRK 561
Query: 79 LDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVIN 138
++LS NKI + F+ + L ++ N++ + F+GL LKTL L N I ++
Sbjct: 562 INLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRVFRGLSGLKTLMLRSNLIGCVS 621
Query: 139 KTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNN 181
F + LL L N IT F++L SL + L +N
Sbjct: 622 NDTFAGLSSVRLLSLYDNRITTITPGA-FTTLVSLSTINLLSN 663
Score = 137 (53.3 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 36/105 (34%), Positives = 55/105 (52%)
Query: 103 LNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFE 162
L + N ++A+ ++ L+ L +DLS N IS++ F + HL LILS+N +
Sbjct: 757 LYLEGNHLTAVPRE-LSALRHLTLIDLSNNSISMLTNYTFSNMSHLSTLILSYNRLRCIP 815
Query: 163 DSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNEN 207
F+ L+SLR+L L N I VP ++L SL +L L N
Sbjct: 816 -VHAFNGLRSLRVLTLHGNDISSVPEGSFNDLT--SLSHLALGTN 857
Score = 127 (49.8 bits), Expect = 5.0e-18, Sum P(3) = 5.0e-18
Identities = 39/116 (33%), Positives = 57/116 (49%)
Query: 340 KCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINEN 398
K R+D+S N S+I AF+ L SL + L N + I + F + L+ +++N N
Sbjct: 332 KLKRIDISKNQISDIAPDAFQGLKSL--TSLVLYGNKITEIVKGLFDGLVSLQLLLLNAN 389
Query: 399 MNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHF-PLERISFLDLSDNPLHCDCN 453
+ L FQ NL +SL N L + F PL+ I L L+ NP CDC+
Sbjct: 390 -KINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSIQTLHLAQNPFVCDCH 444
Score = 125 (49.1 bits), Expect = 4.3e-19, Sum P(4) = 4.3e-19
Identities = 40/123 (32%), Positives = 63/123 (51%)
Query: 335 PLGTLK-CDRLDLSGNNFSNIDSVAFKSLFSLK-LVKINLIPN-LDSIDQRAFVDNIQLE 391
P G K L L GN+ + + + L +L+ L I+L N + + F + L
Sbjct: 747 PRGMPKDVTELYLEGNHLTAVP----RELSALRHLTLIDLSNNSISMLTNYTFSNMSHLS 802
Query: 392 TVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHL-EASHFPLERISFLDLSDNPLHC 450
T+I++ N L+ +P F G +L+ ++L GN +S + E S L +S L L NPLHC
Sbjct: 803 TLILSYN-RLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGTNPLHC 861
Query: 451 DCN 453
DC+
Sbjct: 862 DCS 864
Score = 98 (39.6 bits), Expect = 6.9e-10, Sum P(4) = 6.9e-10
Identities = 33/112 (29%), Positives = 56/112 (50%)
Query: 119 KGL-KELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILK 177
+G+ + + LDL N I+ I K F +L +L L N ++ E F LK L L+
Sbjct: 57 RGIPRNAERLDLDRNNITRITKMDFAGLKNLRVLHLEDNQVSVIERGA-FQDLKQLERLR 115
Query: 178 LDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLAL 229
L+ N++ +P + + P L L L+EN I+ + +F +T++ L L
Sbjct: 116 LNKNKLQVLPELLFQSTP--KLTRLDLSENQIQGIPRKAFR-GITDVKNLQL 164
Score = 96 (38.9 bits), Expect = 1.6e-08, Sum P(4) = 1.6e-08
Identities = 36/111 (32%), Positives = 53/111 (47%)
Query: 119 KGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKL 178
+G+ E++ L N I I AF L+ + +S N I+ + F LKSL L L
Sbjct: 307 EGIVEIR---LEQNSIKAIPAGAFTQYKKLKRIDISKNQISDIAP-DAFQGLKSLTSLVL 362
Query: 179 DNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLAL 229
N+I ++ + L SL L LN N I + N+F L NL+ L+L
Sbjct: 363 YGNKITEIVKGLFDGLV--SLQLLLLNANKINCLRVNTFQ-DLQNLNLLSL 410
Score = 94 (38.1 bits), Expect = 5.7e-16, Sum P(4) = 5.7e-16
Identities = 27/113 (23%), Positives = 60/113 (53%)
Query: 343 RLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNL 401
+++LS N + AF S++ ++ L N L+++ R F L+T+++ N+ +
Sbjct: 561 KINLSNNKIKEVREGAFDGAASVQ--ELMLTGNQLETVHGRVFRGLSGLKTLMLRSNL-I 617
Query: 402 KQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPLHCDCN 453
+ + F G ++++ +SL N ++ + F L +S ++L NP +C+C+
Sbjct: 618 GCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNCH 670
Score = 90 (36.7 bits), Expect = 8.4e-08, Sum P(3) = 8.4e-08
Identities = 59/265 (22%), Positives = 103/265 (38%)
Query: 29 FDQKLEASCTDAGLEVVPIQLNPEVQTIILRENR-ISNVHYT-LSFYIELRSLDLSVNKI 86
+D KL+ GL P+Q +QT+ L +N + + H L+ Y++ ++ S +
Sbjct: 411 YDNKLQT--ISKGL-FAPLQ---SIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARC 464
Query: 87 NV---LGSHNF-EYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAF 142
+ L + + ++K + S + S S + F L + + N+
Sbjct: 465 SSPRRLANKRISQIKSKKFRCSGSEDYRSRFSSECFMDLVCPEKCRCEGTIVDCSNQKLV 524
Query: 143 RDTLHLELLI----LSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQS 198
R HL + L+ N ++ E + IF L +LR + L NN+I +V S
Sbjct: 525 RIPSHLPEYVTDLRLNDNEVSVLEATGIFKKLPNLRKINLSNNKIKEVREGAFDGAA--S 582
Query: 199 LHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXX 258
+ L L N +ETV F L+ L TL L L ++
Sbjct: 583 VQELMLTGNQLETVHGRVFR-GLSGLKTLMLRSNLIGCVSNDTFAGLSSVRLLSLYDNRI 641
Query: 259 XAIPTKQLSKLSALVNLDLSGNNFS 283
I + L +L ++L N F+
Sbjct: 642 TTITPGAFTTLVSLSTINLLSNPFN 666
Score = 85 (35.0 bits), Expect = 4.6e-15, Sum P(4) = 4.6e-15
Identities = 29/106 (27%), Positives = 55/106 (51%)
Query: 344 LDLSGNNFSNIDSVA-FKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNL 401
L L+ N S +++ FK L +L+ KINL N + + + AF ++ +++ N L
Sbjct: 537 LRLNDNEVSVLEATGIFKKLPNLR--KINLSNNKIKEVREGAFDGAASVQELMLTGNQ-L 593
Query: 402 KQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDN 446
+ + ++F+G + LK++ L+ N + + F L + L L DN
Sbjct: 594 ETVHGRVFRGLSGLKTLMLRSNLIGCVSNDTFAGLSSVRLLSLYDN 639
Score = 81 (33.6 bits), Expect = 4.1e-07, Sum P(3) = 4.1e-07
Identities = 30/127 (23%), Positives = 51/127 (40%)
Query: 176 LKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXX 235
L LD N I + + L ++L L+L +N + + +F L L L L
Sbjct: 66 LDLDRNNITRITKMDFAGL--KNLRVLHLEDNQVSVIERGAFQ-DLKQLERLRLNKNKLQ 122
Query: 236 XXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFS 295
+ L IP K ++ + NL L N+ S I+ AF++L
Sbjct: 123 VLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGITDVKNLQLDNNHISCIEDGAFRALRD 182
Query: 296 LKLVKIN 302
L+++ +N
Sbjct: 183 LEILTLN 189
Score = 66 (28.3 bits), Expect = 7.7e-11, Sum P(3) = 7.7e-11
Identities = 28/110 (25%), Positives = 47/110 (42%)
Query: 171 KSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALX 230
K + L L+ N + VP LS L H +L + L+ N I + + +F +++L TL L
Sbjct: 752 KDVTELYLEGNHLTAVPRE-LSALRHLTL--IDLSNNSISMLTNYTFS-NMSHLSTLILS 807
Query: 231 XXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGN 280
LR+L ++P + L++L +L L N
Sbjct: 808 YNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGTN 857
Score = 63 (27.2 bits), Expect = 7.3e-13, Sum P(4) = 7.3e-13
Identities = 18/59 (30%), Positives = 31/59 (52%)
Query: 390 LETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFPLERISFLDLSDNPL 448
+ETV+ N L+ LP + + T L L+GN L+ + L ++ +DLS+N +
Sbjct: 732 METVVRCSNKGLRALPRGMPKDVTELY---LEGNHLTAVPRELSALRHLTLIDLSNNSI 787
Score = 55 (24.4 bits), Expect = 4.3e-19, Sum P(4) = 4.3e-19
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 260 AIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSL 296
AIP ++ L +D+S N S+I AF+ L SL
Sbjct: 321 AIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSL 357
Score = 54 (24.1 bits), Expect = 1.3e-10, Sum P(3) = 1.3e-10
Identities = 13/37 (35%), Positives = 22/37 (59%)
Query: 260 AIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSL 296
A+P ++LS L L +DLS N+ S + + F ++ L
Sbjct: 766 AVP-RELSALRHLTLIDLSNNSISMLTNYTFSNMSHL 801
Score = 53 (23.7 bits), Expect = 7.2e-12, Sum P(4) = 7.2e-12
Identities = 30/121 (24%), Positives = 55/121 (45%)
Query: 339 LKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLD---SIDQRAFVDNIQLE---- 391
L+ + ++ SG S+ +A K + +K K + D F+D + E
Sbjct: 452 LQDNPIETSGARCSSPRRLANKRISQIKSKKFRCSGSEDYRSRFSSECFMDLVCPEKCRC 511
Query: 392 --TVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHF--PLERISFLDLSDNP 447
T++ N L ++PS L + T+L+ L N +S LEA+ L + ++LS+N
Sbjct: 512 EGTIVDCSNQKLVRIPSHLPEYVTDLR---LNDNEVSVLEATGIFKKLPNLRKINLSNNK 568
Query: 448 L 448
+
Sbjct: 569 I 569
Score = 52 (23.4 bits), Expect = 2.1e-10, Sum P(3) = 2.1e-10
Identities = 14/45 (31%), Positives = 22/45 (48%)
Query: 261 IPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIP 305
IP + L +L L L GN+ S++ +F L SL + + P
Sbjct: 814 IPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGTNP 858
Score = 51 (23.0 bits), Expect = 1.1e-18, Sum P(4) = 1.1e-18
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 269 LSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
L +L +L L GN + I F L SL+L+ +N
Sbjct: 354 LKSLTSLVLYGNKITEIVKGLFDGLVSLQLLLLN 387
Score = 51 (23.0 bits), Expect = 1.7e-11, Sum P(3) = 1.7e-11
Identities = 33/156 (21%), Positives = 56/156 (35%)
Query: 395 IN-ENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPLHCDC 452
IN N +K++ F G +++ + L GN L + F L + L L N + C
Sbjct: 562 INLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRVFRGLSGLKTLMLRSNLIGCVS 621
Query: 453 NXXXXXXXXXXXX-----KSTMET----TTVAYEMTSNTSISP-GTTTEAQRVDRIIKNN 502
N + T T TT+ T N +P + + ++
Sbjct: 622 NDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNCHLAWLGKWLRKR 681
Query: 503 HSLTIVLNNLKCSSPPDIKGLEVKAVPENSVHCESN 538
IV N +C P +K + ++ V C+ N
Sbjct: 682 R---IVSGNPRCQKPFFLKEIPIQDVAIQDFTCDGN 714
Score = 50 (22.7 bits), Expect = 1.4e-11, Sum P(4) = 1.4e-11
Identities = 20/89 (22%), Positives = 40/89 (44%)
Query: 337 GTLKCDRLDLSGNNFSNIDSVAFKSLFSLK--LVKINLIPNLDSIDQRAFVDNIQLETVI 394
G L L+GN + F+ L LK +++ NLI + + D A + +++L ++
Sbjct: 579 GAASVQELMLTGNQLETVHGRVFRGLSGLKTLMLRSNLIGCVSN-DTFAGLSSVRLLSLY 637
Query: 395 INENMNLKQLPSKLFQGNTNLKSVSLKGN 423
N + + F +L +++L N
Sbjct: 638 DNR---ITTITPGAFTTLVSLSTINLLSN 663
Score = 43 (20.2 bits), Expect = 4.3e-19, Sum P(4) = 4.3e-19
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 496 DRIIKNNHSLTIVLNNLKCSSPPDIKG 522
D +NN + +NN C PP+ G
Sbjct: 1002 DNDCENNATCVDGINNYVCICPPNYTG 1028
Score = 43 (20.2 bits), Expect = 7.0e-18, Sum P(4) = 7.0e-18
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 270 SALVNLDLSGNNFSNIDSVAFKSLFSLK--LVKINLI 304
+++ L L+GN + F+ L LK +++ NLI
Sbjct: 581 ASVQELMLTGNQLETVHGRVFRGLSGLKTLMLRSNLI 617
Score = 39 (18.8 bits), Expect = 1.7e-16, Sum P(4) = 1.7e-16
Identities = 35/150 (23%), Positives = 57/150 (38%)
Query: 164 SEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHY---LYLNENLIETVLDNSFPFT 220
SE F L + + I+D N L +P Y L LN+N + +VL+ + F
Sbjct: 497 SECFMDLVCPEKCRCEGT-IVDCSNQKLVRIPSHLPEYVTDLRLNDNEV-SVLEATGIFK 554
Query: 221 -LTNLHTLALXXXXXXXXXXXX---XVTLRTLHXXXXXXXXXXAIPTKQLSKLSALV--- 273
L NL + L +++ L + LS L L+
Sbjct: 555 KLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRVFRGLSGLKTLMLRS 614
Query: 274 NLD--LSGNNFSNIDSVAFKSLFSLKLVKI 301
NL +S + F+ + SV SL+ ++ I
Sbjct: 615 NLIGCVSNDTFAGLSSVRLLSLYDNRITTI 644
>UNIPROTKB|J3KNP3 [details] [associations]
symbol:SLIT3 "Slit homolog 3 protein" species:9606 "Homo
sapiens" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005576
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 Pfam:PF12661 Pfam:PF01463 EMBL:AC008409
EMBL:AC008479 EMBL:AC011365 EMBL:AC011389 EMBL:AC027311
EMBL:AC094081 EMBL:AC112165 HGNC:HGNC:11087 ChiTaRS:SLIT3
OMA:SVDCHGL ProteinModelPortal:J3KNP3 Ensembl:ENST00000332966
Uniprot:J3KNP3
Length = 1530
Score = 185 (70.2 bits), Expect = 4.4e-19, Sum P(4) = 4.4e-19
Identities = 54/187 (28%), Positives = 92/187 (49%)
Query: 22 CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNV-HYTLSFYIELRSLD 80
CP++C C ++ C GL VP + + + L N I+ + + LR L
Sbjct: 34 CPTKCTCSAASVD--CHGLGLRAVPRGIPRNAERLDLDRNNITRITKMDFAGLKNLRVLH 91
Query: 81 LSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKT 140
L N+++V+ F+ +L L ++ N++ L + F+ +L LDLS N+I I +
Sbjct: 92 LEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDLSENQIQGIPRK 151
Query: 141 AFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLH 200
AFR ++ L L N+I+ ED F +L+ L IL L+NN I + +++P +
Sbjct: 152 AFRGITDVKNLQLDNNHISCIEDGA-FRALRDLEILTLNNNNISRILVTSFNHMP--KIR 208
Query: 201 YLYLNEN 207
L L+ N
Sbjct: 209 TLRLHSN 215
Score = 176 (67.0 bits), Expect = 7.0e-17, Sum P(4) = 7.0e-17
Identities = 49/165 (29%), Positives = 82/165 (49%)
Query: 18 NKAICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHY-TLSFYIEL 76
N CPS C C + ++ C GL +P L + I L +N I + + Y +L
Sbjct: 276 NSISCPSPCTCSNNIVD--CRGKGLMEIPANLPEGIVEIRLEQNSIKAIPAGAFTQYKKL 333
Query: 77 RSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISV 136
+ +D+S N+I+ + F+ L +L + N+I+ + K F GL L+ L L+ NKI+
Sbjct: 334 KRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIVKGLFDGLVSLQLLLLNANKINC 393
Query: 137 INKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNN 181
+ F+D +L LL L N + +F+ L+S++ L L N
Sbjct: 394 LRVNTFQDLQNLNLLSLYDNKLQTISKG-LFAPLQSIQTLHLAQN 437
Score = 176 (67.0 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 42/135 (31%), Positives = 67/135 (49%)
Query: 22 CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSFYIELRSLDL 81
CP +C C + + C++ GL +P + +V + L N ++ V LS L +DL
Sbjct: 725 CPEQCTCMETVVR--CSNKGLRALPRGMPKDVTELYLEGNHLTAVPRELSALRHLTLIDL 782
Query: 82 SVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTA 141
S N I++L ++ F + L L +SYN + + F GL+ L+ L L N IS + + +
Sbjct: 783 SNNSISMLTNYTFSNMSHLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGS 842
Query: 142 FRDTLHLELLILSFN 156
F D L L L N
Sbjct: 843 FNDLTSLSHLALGTN 857
Score = 164 (62.8 bits), Expect = 1.4e-15, Sum P(4) = 1.4e-15
Identities = 45/134 (33%), Positives = 74/134 (55%)
Query: 74 IELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNK 133
+E+R L N I + + F KL ++IS N+IS ++ D F+GLK L +L L NK
Sbjct: 310 VEIR---LEQNSIKAIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNK 366
Query: 134 ISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSN 193
I+ I K F + L+LL+L+ N I + F L++L +L L +N++ + + +
Sbjct: 367 ITEIVKGLFDGLVSLQLLLLNANKINCLRVNT-FQDLQNLNLLSLYDNKLQTISKGLFA- 424
Query: 194 LPHQSLHYLYLNEN 207
P QS+ L+L +N
Sbjct: 425 -PLQSIQTLHLAQN 437
Score = 159 (61.0 bits), Expect = 3.1e-16, Sum P(4) = 3.1e-16
Identities = 41/132 (31%), Positives = 71/132 (53%)
Query: 53 VQTIILRENRISNVHY-TLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEIS 111
++ + L +N++S + +L L L+ NK+ VL F+ KL L++S N+I
Sbjct: 87 LRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDLSENQIQ 146
Query: 112 ALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLK 171
+ + F+G+ ++K L L N IS I AFR LE+L L+ NNI+ + F+ +
Sbjct: 147 GIPRKAFRGITDVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTS-FNHMP 205
Query: 172 SLRILKLDNNQI 183
+R L+L +N +
Sbjct: 206 KIRTLRLHSNHL 217
Score = 154 (59.3 bits), Expect = 1.1e-15, Sum P(4) = 1.1e-15
Identities = 47/151 (31%), Positives = 74/151 (49%)
Query: 79 LDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVIN 138
LDL N I + +F L L++ N++S + + F+ LK+L+ L L+ NK+ V+
Sbjct: 66 LDLDRNNITRITKMDFAGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLP 125
Query: 139 KTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQS 198
+ F+ T L L LS N I + F + ++ L+LDNN I + + L +
Sbjct: 126 ELLFQSTPKLTRLDLSENQIQGIP-RKAFRGITDVKNLQLDNNHISCIEDGAFRAL--RD 182
Query: 199 LHYLYLNENLIETVLDNSFPFTLTNLHTLAL 229
L L LN N I +L SF + + TL L
Sbjct: 183 LEILTLNNNNISRILVTSFNH-MPKIRTLRL 212
Score = 153 (58.9 bits), Expect = 2.5e-14, Sum P(3) = 2.5e-14
Identities = 47/163 (28%), Positives = 76/163 (46%)
Query: 21 ICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSF--YIELRS 78
+CP +C+C + C++ L +P L V + L +N +S + T F LR
Sbjct: 504 VCPEKCRC--EGTIVDCSNQKLVRIPSHLPEYVTDLRLNDNEVSVLEATGIFKKLPNLRK 561
Query: 79 LDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVIN 138
++LS NKI + F+ + L ++ N++ + F+GL LKTL L N I ++
Sbjct: 562 INLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRVFRGLSGLKTLMLRSNLIGCVS 621
Query: 139 KTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNN 181
F + LL L N IT F++L SL + L +N
Sbjct: 622 NDTFAGLSSVRLLSLYDNRITTITPGA-FTTLVSLSTINLLSN 663
Score = 137 (53.3 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 36/105 (34%), Positives = 55/105 (52%)
Query: 103 LNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFE 162
L + N ++A+ ++ L+ L +DLS N IS++ F + HL LILS+N +
Sbjct: 757 LYLEGNHLTAVPRE-LSALRHLTLIDLSNNSISMLTNYTFSNMSHLSTLILSYNRLRCIP 815
Query: 163 DSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNEN 207
F+ L+SLR+L L N I VP ++L SL +L L N
Sbjct: 816 -VHAFNGLRSLRVLTLHGNDISSVPEGSFNDLT--SLSHLALGTN 857
Score = 127 (49.8 bits), Expect = 5.1e-18, Sum P(3) = 5.1e-18
Identities = 39/116 (33%), Positives = 57/116 (49%)
Query: 340 KCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINEN 398
K R+D+S N S+I AF+ L SL + L N + I + F + L+ +++N N
Sbjct: 332 KLKRIDISKNQISDIAPDAFQGLKSL--TSLVLYGNKITEIVKGLFDGLVSLQLLLLNAN 389
Query: 399 MNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHF-PLERISFLDLSDNPLHCDCN 453
+ L FQ NL +SL N L + F PL+ I L L+ NP CDC+
Sbjct: 390 -KINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSIQTLHLAQNPFVCDCH 444
Score = 125 (49.1 bits), Expect = 4.4e-19, Sum P(4) = 4.4e-19
Identities = 40/123 (32%), Positives = 63/123 (51%)
Query: 335 PLGTLK-CDRLDLSGNNFSNIDSVAFKSLFSLK-LVKINLIPN-LDSIDQRAFVDNIQLE 391
P G K L L GN+ + + + L +L+ L I+L N + + F + L
Sbjct: 747 PRGMPKDVTELYLEGNHLTAVP----RELSALRHLTLIDLSNNSISMLTNYTFSNMSHLS 802
Query: 392 TVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHL-EASHFPLERISFLDLSDNPLHC 450
T+I++ N L+ +P F G +L+ ++L GN +S + E S L +S L L NPLHC
Sbjct: 803 TLILSYN-RLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGTNPLHC 861
Query: 451 DCN 453
DC+
Sbjct: 862 DCS 864
Score = 98 (39.6 bits), Expect = 7.0e-10, Sum P(4) = 7.0e-10
Identities = 33/112 (29%), Positives = 56/112 (50%)
Query: 119 KGL-KELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILK 177
+G+ + + LDL N I+ I K F +L +L L N ++ E F LK L L+
Sbjct: 57 RGIPRNAERLDLDRNNITRITKMDFAGLKNLRVLHLEDNQVSVIERGA-FQDLKQLERLR 115
Query: 178 LDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLAL 229
L+ N++ +P + + P L L L+EN I+ + +F +T++ L L
Sbjct: 116 LNKNKLQVLPELLFQSTP--KLTRLDLSENQIQGIPRKAFR-GITDVKNLQL 164
Score = 96 (38.9 bits), Expect = 1.7e-08, Sum P(4) = 1.7e-08
Identities = 36/111 (32%), Positives = 53/111 (47%)
Query: 119 KGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKL 178
+G+ E++ L N I I AF L+ + +S N I+ + F LKSL L L
Sbjct: 307 EGIVEIR---LEQNSIKAIPAGAFTQYKKLKRIDISKNQISDIAP-DAFQGLKSLTSLVL 362
Query: 179 DNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLAL 229
N+I ++ + L SL L LN N I + N+F L NL+ L+L
Sbjct: 363 YGNKITEIVKGLFDGLV--SLQLLLLNANKINCLRVNTFQ-DLQNLNLLSL 410
Score = 94 (38.1 bits), Expect = 5.9e-16, Sum P(4) = 5.9e-16
Identities = 27/113 (23%), Positives = 60/113 (53%)
Query: 343 RLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNL 401
+++LS N + AF S++ ++ L N L+++ R F L+T+++ N+ +
Sbjct: 561 KINLSNNKIKEVREGAFDGAASVQ--ELMLTGNQLETVHGRVFRGLSGLKTLMLRSNL-I 617
Query: 402 KQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPLHCDCN 453
+ + F G ++++ +SL N ++ + F L +S ++L NP +C+C+
Sbjct: 618 GCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNCH 670
Score = 90 (36.7 bits), Expect = 8.5e-08, Sum P(3) = 8.5e-08
Identities = 59/265 (22%), Positives = 103/265 (38%)
Query: 29 FDQKLEASCTDAGLEVVPIQLNPEVQTIILRENR-ISNVHYT-LSFYIELRSLDLSVNKI 86
+D KL+ GL P+Q +QT+ L +N + + H L+ Y++ ++ S +
Sbjct: 411 YDNKLQT--ISKGL-FAPLQ---SIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARC 464
Query: 87 NV---LGSHNF-EYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAF 142
+ L + + ++K + S + S S + F L + + N+
Sbjct: 465 SSPRRLANKRISQIKSKKFRCSGSEDYRSRFSSECFMDLVCPEKCRCEGTIVDCSNQKLV 524
Query: 143 RDTLHLELLI----LSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQS 198
R HL + L+ N ++ E + IF L +LR + L NN+I +V S
Sbjct: 525 RIPSHLPEYVTDLRLNDNEVSVLEATGIFKKLPNLRKINLSNNKIKEVREGAFDGAA--S 582
Query: 199 LHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXX 258
+ L L N +ETV F L+ L TL L L ++
Sbjct: 583 VQELMLTGNQLETVHGRVFR-GLSGLKTLMLRSNLIGCVSNDTFAGLSSVRLLSLYDNRI 641
Query: 259 XAIPTKQLSKLSALVNLDLSGNNFS 283
I + L +L ++L N F+
Sbjct: 642 TTITPGAFTTLVSLSTINLLSNPFN 666
Score = 85 (35.0 bits), Expect = 4.7e-15, Sum P(4) = 4.7e-15
Identities = 29/106 (27%), Positives = 55/106 (51%)
Query: 344 LDLSGNNFSNIDSVA-FKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNL 401
L L+ N S +++ FK L +L+ KINL N + + + AF ++ +++ N L
Sbjct: 537 LRLNDNEVSVLEATGIFKKLPNLR--KINLSNNKIKEVREGAFDGAASVQELMLTGNQ-L 593
Query: 402 KQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDN 446
+ + ++F+G + LK++ L+ N + + F L + L L DN
Sbjct: 594 ETVHGRVFRGLSGLKTLMLRSNLIGCVSNDTFAGLSSVRLLSLYDN 639
Score = 81 (33.6 bits), Expect = 4.1e-07, Sum P(3) = 4.1e-07
Identities = 30/127 (23%), Positives = 51/127 (40%)
Query: 176 LKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXX 235
L LD N I + + L ++L L+L +N + + +F L L L L
Sbjct: 66 LDLDRNNITRITKMDFAGL--KNLRVLHLEDNQVSVIERGAFQ-DLKQLERLRLNKNKLQ 122
Query: 236 XXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFS 295
+ L IP K ++ + NL L N+ S I+ AF++L
Sbjct: 123 VLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGITDVKNLQLDNNHISCIEDGAFRALRD 182
Query: 296 LKLVKIN 302
L+++ +N
Sbjct: 183 LEILTLN 189
Score = 66 (28.3 bits), Expect = 7.9e-11, Sum P(3) = 7.9e-11
Identities = 28/110 (25%), Positives = 47/110 (42%)
Query: 171 KSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALX 230
K + L L+ N + VP LS L H +L + L+ N I + + +F +++L TL L
Sbjct: 752 KDVTELYLEGNHLTAVPRE-LSALRHLTL--IDLSNNSISMLTNYTFS-NMSHLSTLILS 807
Query: 231 XXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGN 280
LR+L ++P + L++L +L L N
Sbjct: 808 YNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGTN 857
Score = 63 (27.2 bits), Expect = 7.4e-13, Sum P(4) = 7.4e-13
Identities = 18/59 (30%), Positives = 31/59 (52%)
Query: 390 LETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFPLERISFLDLSDNPL 448
+ETV+ N L+ LP + + T L L+GN L+ + L ++ +DLS+N +
Sbjct: 732 METVVRCSNKGLRALPRGMPKDVTELY---LEGNHLTAVPRELSALRHLTLIDLSNNSI 787
Score = 55 (24.4 bits), Expect = 4.4e-19, Sum P(4) = 4.4e-19
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 260 AIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSL 296
AIP ++ L +D+S N S+I AF+ L SL
Sbjct: 321 AIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSL 357
Score = 54 (24.1 bits), Expect = 1.4e-10, Sum P(3) = 1.4e-10
Identities = 13/37 (35%), Positives = 22/37 (59%)
Query: 260 AIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSL 296
A+P ++LS L L +DLS N+ S + + F ++ L
Sbjct: 766 AVP-RELSALRHLTLIDLSNNSISMLTNYTFSNMSHL 801
Score = 53 (23.7 bits), Expect = 7.3e-12, Sum P(4) = 7.3e-12
Identities = 30/121 (24%), Positives = 55/121 (45%)
Query: 339 LKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLD---SIDQRAFVDNIQLE---- 391
L+ + ++ SG S+ +A K + +K K + D F+D + E
Sbjct: 452 LQDNPIETSGARCSSPRRLANKRISQIKSKKFRCSGSEDYRSRFSSECFMDLVCPEKCRC 511
Query: 392 --TVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHF--PLERISFLDLSDNP 447
T++ N L ++PS L + T+L+ L N +S LEA+ L + ++LS+N
Sbjct: 512 EGTIVDCSNQKLVRIPSHLPEYVTDLR---LNDNEVSVLEATGIFKKLPNLRKINLSNNK 568
Query: 448 L 448
+
Sbjct: 569 I 569
Score = 52 (23.4 bits), Expect = 2.2e-10, Sum P(3) = 2.2e-10
Identities = 14/45 (31%), Positives = 22/45 (48%)
Query: 261 IPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIP 305
IP + L +L L L GN+ S++ +F L SL + + P
Sbjct: 814 IPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGTNP 858
Score = 51 (23.0 bits), Expect = 1.1e-18, Sum P(4) = 1.1e-18
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 269 LSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
L +L +L L GN + I F L SL+L+ +N
Sbjct: 354 LKSLTSLVLYGNKITEIVKGLFDGLVSLQLLLLN 387
Score = 51 (23.0 bits), Expect = 1.7e-11, Sum P(3) = 1.7e-11
Identities = 33/156 (21%), Positives = 56/156 (35%)
Query: 395 IN-ENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPLHCDC 452
IN N +K++ F G +++ + L GN L + F L + L L N + C
Sbjct: 562 INLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRVFRGLSGLKTLMLRSNLIGCVS 621
Query: 453 NXXXXXXXXXXXX-----KSTMET----TTVAYEMTSNTSISP-GTTTEAQRVDRIIKNN 502
N + T T TT+ T N +P + + ++
Sbjct: 622 NDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNCHLAWLGKWLRKR 681
Query: 503 HSLTIVLNNLKCSSPPDIKGLEVKAVPENSVHCESN 538
IV N +C P +K + ++ V C+ N
Sbjct: 682 R---IVSGNPRCQKPFFLKEIPIQDVAIQDFTCDGN 714
Score = 50 (22.7 bits), Expect = 1.5e-11, Sum P(4) = 1.5e-11
Identities = 20/89 (22%), Positives = 40/89 (44%)
Query: 337 GTLKCDRLDLSGNNFSNIDSVAFKSLFSLK--LVKINLIPNLDSIDQRAFVDNIQLETVI 394
G L L+GN + F+ L LK +++ NLI + + D A + +++L ++
Sbjct: 579 GAASVQELMLTGNQLETVHGRVFRGLSGLKTLMLRSNLIGCVSN-DTFAGLSSVRLLSLY 637
Query: 395 INENMNLKQLPSKLFQGNTNLKSVSLKGN 423
N + + F +L +++L N
Sbjct: 638 DNR---ITTITPGAFTTLVSLSTINLLSN 663
Score = 43 (20.2 bits), Expect = 4.4e-19, Sum P(4) = 4.4e-19
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 496 DRIIKNNHSLTIVLNNLKCSSPPDIKG 522
D +NN + +NN C PP+ G
Sbjct: 1009 DNDCENNATCVDGINNYVCICPPNYTG 1035
Score = 43 (20.2 bits), Expect = 7.1e-18, Sum P(4) = 7.1e-18
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 270 SALVNLDLSGNNFSNIDSVAFKSLFSLK--LVKINLI 304
+++ L L+GN + F+ L LK +++ NLI
Sbjct: 581 ASVQELMLTGNQLETVHGRVFRGLSGLKTLMLRSNLI 617
Score = 39 (18.8 bits), Expect = 1.8e-16, Sum P(4) = 1.8e-16
Identities = 35/150 (23%), Positives = 57/150 (38%)
Query: 164 SEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHY---LYLNENLIETVLDNSFPFT 220
SE F L + + I+D N L +P Y L LN+N + +VL+ + F
Sbjct: 497 SECFMDLVCPEKCRCEGT-IVDCSNQKLVRIPSHLPEYVTDLRLNDNEV-SVLEATGIFK 554
Query: 221 -LTNLHTLALXXXXXXXXXXXX---XVTLRTLHXXXXXXXXXXAIPTKQLSKLSALV--- 273
L NL + L +++ L + LS L L+
Sbjct: 555 KLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRVFRGLSGLKTLMLRS 614
Query: 274 NLD--LSGNNFSNIDSVAFKSLFSLKLVKI 301
NL +S + F+ + SV SL+ ++ I
Sbjct: 615 NLIGCVSNDTFAGLSSVRLLSLYDNRITTI 644
>MGI|MGI:107973 [details] [associations]
symbol:Igfals "insulin-like growth factor binding protein,
acid labile subunit" species:10090 "Mus musculus" [GO:0005515
"protein binding" evidence=IPI] [GO:0005520 "insulin-like growth
factor binding" evidence=ISO] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=ISO] [GO:0042567
"insulin-like growth factor ternary complex" evidence=ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 MGI:MGI:107973
GO:GO:0005634 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007155 CTD:3483
HOVERGEN:HBG000327 OrthoDB:EOG4FFD1R InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 EMBL:U66900 EMBL:AK004926
IPI:IPI00556721 PIR:JC6128 RefSeq:NP_032366.2 UniGene:Mm.3135
ProteinModelPortal:P70389 SMR:P70389 IntAct:P70389 MINT:MINT-217480
STRING:P70389 PaxDb:P70389 PRIDE:P70389 Ensembl:ENSMUST00000050714
GeneID:16005 KEGG:mmu:16005 GeneTree:ENSGT00690000101816
InParanoid:P70389 NextBio:288802 Bgee:P70389 Genevestigator:P70389
GermOnline:ENSMUSG00000046070 GO:GO:0042567 Uniprot:P70389
Length = 603
Score = 235 (87.8 bits), Expect = 2.1e-18, Sum P(2) = 2.1e-18
Identities = 96/379 (25%), Positives = 152/379 (40%)
Query: 76 LRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKIS 135
L L L N + L + F + L +L++ N + L + F+GL L L+L +N +
Sbjct: 124 LYHLHLERNLLRSLAAGLFRHTPSLASLSLGNNLLGRLEEGLFRGLSHLWDLNLGWNSLV 183
Query: 136 VINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLP 195
V+ T F+ +L L+L+ N +TY + + + L LR L L N + V NV +LP
Sbjct: 184 VLPDTVFQGLGNLHELVLAGNKLTYLQPA-LLCGLGELRELDLSRNALRSVKANVFIHLP 242
Query: 196 HQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXX 255
L LYL+ NLI V +F + L L L L LH
Sbjct: 243 R--LQKLYLDRNLITAVAPRAF-LGMKALRWLDLSHNRVAGLLEDTFPGLLGLHVLRLAH 299
Query: 256 XXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQXXX 315
++ + L L L L N + F+ L L+++ +N + +
Sbjct: 300 NAITSLRPRTFKDLHFLEELQLGHNRIRQLGEKTFEGLGQLEVLTLN-DNQIHEVKVGAF 358
Query: 316 XXXXXXXXXXXXXXAFSLTP----LGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKIN 371
P G + L L + I F L L+ ++
Sbjct: 359 FGLFNVAVMNLSGNCLRSLPEHVFQGLGRLHSLHLEHSCLGRIRLHTFAGLSGLR--RLF 416
Query: 372 LIPN-LDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEA 430
L N + SI++++ +L + + N L LP +LFQG L+ + L N L+ L
Sbjct: 417 LRDNSISSIEEQSLAGLSELLELDLTANQ-LTHLPRQLFQGLGQLEYLLLSNNQLTMLSE 475
Query: 431 SHF-PLERISFLDLSDNPL 448
PL+R +LDLS N L
Sbjct: 476 DVLGPLQRAFWLDLSHNRL 494
Score = 193 (73.0 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 65/252 (25%), Positives = 116/252 (46%)
Query: 52 EVQTIILRENRISNVHYTLSFYI-ELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEI 110
E++ + L N + +V + ++ L+ L L N I + F L L++S+N +
Sbjct: 219 ELRELDLSRNALRSVKANVFIHLPRLQKLYLDRNLITAVAPRAFLGMKALRWLDLSHNRV 278
Query: 111 SALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSL 170
+ L +DTF GL L L L++N I+ + F+D LE L L N I + + F L
Sbjct: 279 AGLLEDTFPGLLGLHVLRLAHNAITSLRPRTFKDLHFLEELQLGHNRIRQLGE-KTFEGL 337
Query: 171 KSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALX 230
L +L L++NQI +V L + ++ + L+ N + ++ ++ F L LH+L L
Sbjct: 338 GQLEVLTLNDNQIHEVKVGAFFGLFNVAV--MNLSGNCLRSLPEHVFQ-GLGRLHSLHLE 394
Query: 231 XXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAF 290
L L +I + L+ LS L+ LDL+ N +++ F
Sbjct: 395 HSCLGRIRLHTFAGLSGLRRLFLRDNSISSIEEQSLAGLSELLELDLTANQLTHLPRQLF 454
Query: 291 KSLFSLKLVKIN 302
+ L L+ + ++
Sbjct: 455 QGLGQLEYLLLS 466
Score = 188 (71.2 bits), Expect = 3.9e-13, Sum P(2) = 3.9e-13
Identities = 70/252 (27%), Positives = 115/252 (45%)
Query: 56 IILRENRISNVHYTLSFYI-ELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALS 114
++L N+++ + L + ELR LDLS N + + ++ F + +L L + N I+A++
Sbjct: 199 LVLAGNKLTYLQPALLCGLGELRELDLSRNALRSVKANVFIHLPRLQKLYLDRNLITAVA 258
Query: 115 KDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLR 174
F G+K L+ LDLS+N+++ + + F L L +L L+ N IT F L L
Sbjct: 259 PRAFLGMKALRWLDLSHNRVAGLLEDTFPGLLGLHVLRLAHNAITSLRP-RTFKDLHFLE 317
Query: 175 ILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXX 234
L+L +N+I + L L L LN+N I V +F F L N+ + L
Sbjct: 318 ELQLGHNRIRQLGEKTFEGLGQ--LEVLTLNDNQIHEVKVGAF-FGLFNVAVMNLSGNCL 374
Query: 235 XXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLF 294
L LH I + LS L L L N+ S+I+ + L
Sbjct: 375 RSLPEHVFQGLGRLHSLHLEHSCLGRIRLHTFAGLSGLRRLFLRDNSISSIEEQSLAGLS 434
Query: 295 SLKLVKINLIPN 306
+L++++L N
Sbjct: 435 --ELLELDLTAN 444
Score = 153 (58.9 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 51/179 (28%), Positives = 87/179 (48%)
Query: 52 EVQTIILRENRISNVHYTLSFYI-ELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEI 110
+++ + L +N+I V F + + ++LS N + L H F+ +L +L++ ++ +
Sbjct: 339 QLEVLTLNDNQIHEVKVGAFFGLFNVAVMNLSGNCLRSLPEHVFQGLGRLHSLHLEHSCL 398
Query: 111 SALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSL 170
+ TF GL L+ L L N IS I + + L L L+ N +T+ ++F L
Sbjct: 399 GRIRLHTFAGLSGLRRLFLRDNSISSIEEQSLAGLSELLELDLTANQLTHLP-RQLFQGL 457
Query: 171 KSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLAL 229
L L L NNQ+ + +VL P Q +L L+ N +ET + F +L L L L
Sbjct: 458 GQLEYLLLSNNQLTMLSEDVLG--PLQRAFWLDLSHNRLETPAEGLFS-SLGRLRYLNL 513
Score = 132 (51.5 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 39/136 (28%), Positives = 68/136 (50%)
Query: 76 LRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKIS 135
L SL L + + + H F + L L + N IS++ + + GL EL LDL+ N+++
Sbjct: 388 LHSLHLEHSCLGRIRLHTFAGLSGLRRLFLRDNSISSIEEQSLAGLSELLELDLTANQLT 447
Query: 136 VINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLP 195
+ + F+ LE L+LS N +T + ++ L+ L L +N++ + S+L
Sbjct: 448 HLPRQLFQGLGQLEYLLLSNNQLTMLSE-DVLGPLQRAFWLDLSHNRLETPAEGLFSSLG 506
Query: 196 HQSLHYLYLNENLIET 211
L YL L N ++T
Sbjct: 507 R--LRYLNLRNNSLQT 520
Score = 127 (49.8 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 73/305 (23%), Positives = 123/305 (40%)
Query: 151 LILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIE 210
L L NN++ S F +L SL L L + + + L L Q+L++L+L NL+
Sbjct: 79 LWLDGNNLSSIP-SAAFQNLSSLDFLNLQGSWLRSLEPQALLGL--QNLYHLHLERNLLR 135
Query: 211 TVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLS 270
++ F T +L +L+L L L +P L
Sbjct: 136 SLAAGLFRHT-PSLASLSLGNNLLGRLEEGLFRGLSHLWDLNLGWNSLVVLPDTVFQGLG 194
Query: 271 ALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQXXXXXXXXXXXXXXXXX 329
L L L+GN + + L L+ +++L N L S+
Sbjct: 195 NLHELVLAGNKLTYLQPALLCGLGELR--ELDLSRNALRSVKANVFIHLPRLQKLYLDRN 252
Query: 330 AFS-LTP---LGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRAF 384
+ + P LG LDLS N + + F L L +++ L N + S+ R F
Sbjct: 253 LITAVAPRAFLGMKALRWLDLSHNRVAGLLEDTFPGLLGLHVLR--LAHNAITSLRPRTF 310
Query: 385 VDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEA-SHFPLERISFLDL 443
D LE + + N ++QL K F+G L+ ++L N + ++ + F L ++ ++L
Sbjct: 311 KDLHFLEELQLGHN-RIRQLGEKTFEGLGQLEVLTLNDNQIHEVKVGAFFGLFNVAVMNL 369
Query: 444 SDNPL 448
S N L
Sbjct: 370 SGNCL 374
Score = 114 (45.2 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 33/110 (30%), Positives = 58/110 (52%)
Query: 53 VQTIILRENRISNVH-YTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEIS 111
++ + LR+N IS++ +L+ EL LDL+ N++ L F+ +L L +S N+++
Sbjct: 412 LRRLFLRDNSISSIEEQSLAGLSELLELDLTANQLTHLPRQLFQGLGQLEYLLLSNNQLT 471
Query: 112 ALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYF 161
LS+D L+ LDLS+N++ + F L L L N++ F
Sbjct: 472 MLSEDVLGPLQRAFWLDLSHNRLETPAEGLFSSLGRLRYLNLRNNSLQTF 521
Score = 63 (27.2 bits), Expect = 2.1e-18, Sum P(2) = 2.1e-18
Identities = 10/27 (37%), Positives = 18/27 (66%)
Query: 510 NNLKCSSPPDIKGLEVKAVPENS-VHC 535
NN+ C+ P ++ GL+++ + E VHC
Sbjct: 577 NNITCAGPANVSGLDLRDISETLFVHC 603
>ZFIN|ZDB-GENE-030722-4 [details] [associations]
symbol:slit1b "slit homolog 1b (Drosophila)"
species:7955 "Danio rerio" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0007411 "axon guidance" evidence=NAS]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 ZFIN:ZDB-GENE-030722-4 GO:GO:0007411
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
Pfam:PF02210 Pfam:PF12661 Pfam:PF01463 HOVERGEN:HBG057959
EMBL:DQ153065 IPI:IPI00481688 RefSeq:NP_001030147.1
UniGene:Dr.48282 ProteinModelPortal:Q3Y6S4 SMR:Q3Y6S4 STRING:Q3Y6S4
GeneID:561685 KEGG:dre:561685 CTD:561685 NextBio:20884046
Uniprot:Q3Y6S4
Length = 1532
Score = 180 (68.4 bits), Expect = 2.5e-18, Sum P(4) = 2.5e-18
Identities = 55/162 (33%), Positives = 79/162 (48%)
Query: 22 CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTII-LRENRISNVHY-TLSFYIELRSL 79
CP C C + ++ C GL +P + PE T I L +N I +V S Y LR +
Sbjct: 278 CPPMCSCTNNIVD--CRGKGLTAIPANM-PESMTEIRLEQNGIKSVPPGAFSSYKRLRRI 334
Query: 80 DLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINK 139
DLS N+I+ + F L +L + N+I+ L + F GL L+ L L+ NKI +
Sbjct: 335 DLSNNQISEIAPDAFHGLRSLNSLVLYGNKITDLPRGVFDGLSALELLLLNANKIHCVRV 394
Query: 140 TAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNN 181
F+D +L LL L N I F+ LKS++ L L N
Sbjct: 395 NVFQDLENLSLLSLYDNKIQTLAKGT-FAPLKSIQTLHLAQN 435
Score = 171 (65.3 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 44/138 (31%), Positives = 69/138 (50%)
Query: 19 KAICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSFYIELRS 78
K CP +C C D + C++ L +P + V + L N ++ LS + +L+
Sbjct: 730 KPQCPEQCTCVDSVVR--CSNKHLSALPRGVPLNVTELYLDGNVFVSIPQELSAFRQLQL 787
Query: 79 LDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVIN 138
LDLS NKI+ L + +F ++L L +SYN + + F GL L+ L L N IS ++
Sbjct: 788 LDLSNNKISSLTNTSFTNMSQLTTLILSYNALRCIPPLVFGGLSSLRLLSLHGNNISELH 847
Query: 139 KTAFRDTLHLELLILSFN 156
+ FRD L L + N
Sbjct: 848 QQIFRDAASLSHLAIGAN 865
Score = 163 (62.4 bits), Expect = 1.8e-16, Sum P(4) = 1.8e-16
Identities = 52/198 (26%), Positives = 91/198 (45%)
Query: 10 LILALTKLNKA-ICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHY 68
L+L+L ++ CP C C ++ C + VP + + + L N ++++
Sbjct: 18 LLLSLFLSGRSGACPPHCSCTGSTVD--CHGLAFKSVPRNIPKTTERLDLNANNLTHIGK 75
Query: 69 T-LSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTL 127
+ LR L L N+I + F +L L ++ N + L + F L L
Sbjct: 76 DDFAGLKHLRILHLMDNQIVSIDRGAFSDLKELDRLRLNRNRLQQLPELLFLKNPALSRL 135
Query: 128 DLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVP 187
DLS N I +I + AFR ++ L L N+I+ ED F +++ L +L L+NN I +P
Sbjct: 136 DLSENNIQMIPRRAFRGATDIKNLQLDKNHISCIEDGA-FRAMRVLEVLTLNNNNISAIP 194
Query: 188 NNVLSNLPHQSLHYLYLN 205
+ +++P L+ N
Sbjct: 195 ISSFNHMPKLRTFRLHWN 212
Score = 140 (54.3 bits), Expect = 5.8e-14, Sum P(4) = 5.8e-14
Identities = 43/130 (33%), Positives = 65/130 (50%)
Query: 100 LLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNIT 159
+ + + N I ++ F K L+ +DLS N+IS I AF L L+L N IT
Sbjct: 307 MTEIRLEQNGIKSVPPGAFSSYKRLRRIDLSNNQISEIAPDAFHGLRSLNSLVLYGNKIT 366
Query: 160 YFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPF 219
+F L +L +L L+ N+I V NV +L + SL LY +N I+T+ +F
Sbjct: 367 DLPRG-VFDGLSALELLLLNANKIHCVRVNVFQDLENLSLLSLY--DNKIQTLAKGTFA- 422
Query: 220 TLTNLHTLAL 229
L ++ TL L
Sbjct: 423 PLKSIQTLHL 432
Score = 139 (54.0 bits), Expect = 2.5e-13, Sum P(3) = 2.5e-13
Identities = 42/163 (25%), Positives = 77/163 (47%)
Query: 18 NKAICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSF--YIE 75
+K +CP +C+C + C++ L P L + L N +S + T F
Sbjct: 506 SKPVCPPKCRC--EATVVDCSNLRLTKFPEHLPLSTTELRLNNNDLSILEATGLFRPLTH 563
Query: 76 LRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKIS 135
L+ ++LS NKI + FE + ++ L+++ N + ++ F+G+ L+ L L N I
Sbjct: 564 LKKINLSNNKITEIEDGAFEGASSVVELHLTANLLVSVRGGMFRGMDGLRMLMLRNNHIR 623
Query: 136 VINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKL 178
++ ++F ++ LL L N ++ F SL +L L L
Sbjct: 624 CVHNSSFSGLQNVRLLSLYDNQLSTIMPGA-FDSLPNLSTLNL 665
Score = 135 (52.6 bits), Expect = 6.8e-13, Sum P(3) = 6.8e-13
Identities = 43/128 (33%), Positives = 67/128 (52%)
Query: 103 LNISYNEISAL-SKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYF 161
L ++ N++S L + F+ L LK ++LS NKI+ I AF + L L+ N +
Sbjct: 542 LRLNNNDLSILEATGLFRPLTHLKKINLSNNKITEIEDGAFEGASSVVELHLTANLLVSV 601
Query: 162 EDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTL 221
+F + LR+L L NN I V N+ S L Q++ L L +N + T++ +F +L
Sbjct: 602 RGG-MFRGMDGLRMLMLRNNHIRCVHNSSFSGL--QNVRLLSLYDNQLSTIMPGAFD-SL 657
Query: 222 TNLHTLAL 229
NL TL L
Sbjct: 658 PNLSTLNL 665
Score = 134 (52.2 bits), Expect = 2.5e-18, Sum P(4) = 2.5e-18
Identities = 44/125 (35%), Positives = 65/125 (52%)
Query: 332 SLTPLGT-LKCDRLDLSGNNFSNI--DSVAFKSLFSLKLVKINLIPNLDSIDQRAFVDNI 388
S P G L L L GN F +I + AF+ L L L N I S+ +F +
Sbjct: 752 SALPRGVPLNVTELYLDGNVFVSIPQELSAFRQLQLLDLSN-NKI---SSLTNTSFTNMS 807
Query: 389 QLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHF-PLERISFLDLSDNP 447
QL T+I++ N L+ +P +F G ++L+ +SL GN++S L F +S L + NP
Sbjct: 808 QLTTLILSYNA-LRCIPPLVFGGLSSLRLLSLHGNNISELHQQIFRDAASLSHLAIGANP 866
Query: 448 LHCDC 452
L+CDC
Sbjct: 867 LYCDC 871
Score = 129 (50.5 bits), Expect = 8.1e-13, Sum P(4) = 8.1e-13
Identities = 43/151 (28%), Positives = 68/151 (45%)
Query: 79 LDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVIN 138
LDL+ N + +G +F L L++ N+I ++ + F LKEL L L+ N++ +
Sbjct: 63 LDLNANNLTHIGKDDFAGLKHLRILHLMDNQIVSIDRGAFSDLKELDRLRLNRNRLQQLP 122
Query: 139 KTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQS 198
+ F L L LS NNI F ++ L+LD N I + + + +
Sbjct: 123 ELLFLKNPALSRLDLSENNIQMIP-RRAFRGATDIKNLQLDKNHISCIEDGAFRAM--RV 179
Query: 199 LHYLYLNENLIETVLDNSFPFTLTNLHTLAL 229
L L LN N I + +SF + L T L
Sbjct: 180 LEVLTLNNNNISAIPISSFNH-MPKLRTFRL 209
Score = 128 (50.1 bits), Expect = 1.0e-12, Sum P(4) = 1.0e-12
Identities = 41/127 (32%), Positives = 62/127 (48%)
Query: 58 LRENRISNVHY-TLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKD 116
L +N+I ++ S EL L L+ N++ L F L L++S N I + +
Sbjct: 89 LMDNQIVSIDRGAFSDLKELDRLRLNRNRLQQLPELLFLKNPALSRLDLSENNIQMIPRR 148
Query: 117 TFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRIL 176
F+G ++K L L N IS I AFR LE+L L+ NNI+ S F+ + LR
Sbjct: 149 AFRGATDIKNLQLDKNHISCIEDGAFRAMRVLEVLTLNNNNISAIPISS-FNHMPKLRTF 207
Query: 177 KLDNNQI 183
+L N +
Sbjct: 208 RLHWNSL 214
Score = 125 (49.1 bits), Expect = 7.1e-12, Sum P(3) = 7.1e-12
Identities = 47/179 (26%), Positives = 81/179 (45%)
Query: 30 DQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNV--HYTLSFYIELRSLDLSVNKIN 87
D ++ C V P + E + R++ H LS ELR L+ N ++
Sbjct: 497 DTRMNKDCNSK--PVCPPKCRCEATVVDCSNLRLTKFPEHLPLST-TELR---LNNNDLS 550
Query: 88 VLGSHN-FEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTL 146
+L + F L +N+S N+I+ + F+G + L L+ N + + FR
Sbjct: 551 ILEATGLFRPLTHLKKINLSNNKITEIEDGAFEGASSVVELHLTANLLVSVRGGMFRGMD 610
Query: 147 HLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLN 205
L +L+L N+I +S FS L+++R+L L +NQ+ + +LP+ S L N
Sbjct: 611 GLRMLMLRNNHIRCVHNSS-FSGLQNVRLLSLYDNQLSTIMPGAFDSLPNLSTLNLLAN 668
Score = 122 (48.0 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 40/114 (35%), Positives = 55/114 (48%)
Query: 343 RLDLSGNNFSNIDSVAFKSLFSLKLVKI--NLIPNLDSIDQRAFVDNIQ-LETVIINENM 399
R+DLS N S I AF L SL + + N I +L R D + LE +++N N
Sbjct: 333 RIDLSNNQISEIAPDAFHGLRSLNSLVLYGNKITDLP----RGVFDGLSALELLLLNAN- 387
Query: 400 NLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHF-PLERISFLDLSDNPLHCDC 452
+ + +FQ NL +SL N + L F PL+ I L L+ NP CDC
Sbjct: 388 KIHCVRVNVFQDLENLSLLSLYDNKIQTLAKGTFAPLKSIQTLHLAQNPFVCDC 441
Score = 111 (44.1 bits), Expect = 2.0e-15, Sum P(3) = 2.0e-15
Identities = 37/120 (30%), Positives = 62/120 (51%)
Query: 335 PLGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNL-DSIDQRAFVDNIQLETV 393
PL LK +++LS N + I+ AF+ S+ V+++L NL S+ F L +
Sbjct: 560 PLTHLK--KINLSNNKITEIEDGAFEGASSV--VELHLTANLLVSVRGGMFRGMDGLRML 615
Query: 394 IINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPLHCDC 452
++ N +++ + + F G N++ +SL N LS + F L +S L+L NP CDC
Sbjct: 616 MLRNN-HIRCVHNSSFSGLQNVRLLSLYDNQLSTIMPGAFDSLPNLSTLNLLANPFSCDC 674
Score = 66 (28.3 bits), Expect = 7.4e-11, Sum P(3) = 7.4e-11
Identities = 29/131 (22%), Positives = 44/131 (33%)
Query: 175 ILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXX 234
+++ N + +P V N+ LYL+ N+ ++ F L L L
Sbjct: 743 VVRCSNKHLSALPRGVPLNVTE-----LYLDGNVFVSIPQELSAFR--QLQLLDLSNNKI 795
Query: 235 XXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLF 294
+ L IP LS+L L L GNN S + F+
Sbjct: 796 SSLTNTSFTNMSQLTTLILSYNALRCIPPLVFGGLSSLRLLSLHGNNISELHQQIFRDAA 855
Query: 295 SLKLVKINLIP 305
SL + I P
Sbjct: 856 SLSHLAIGANP 866
Score = 66 (28.3 bits), Expect = 5.9e-06, Sum P(3) = 5.9e-06
Identities = 29/132 (21%), Positives = 53/132 (40%)
Query: 171 KSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALX 230
K+ L L+ N + + + + L H L L+L +N I ++ +F L L L L
Sbjct: 58 KTTERLDLNANNLTHIGKDDFAGLKH--LRILHLMDNQIVSIDRGAFS-DLKELDRLRLN 114
Query: 231 XXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAF 290
+ L IP + + + NL L N+ S I+ AF
Sbjct: 115 RNRLQQLPELLFLKNPALSRLDLSENNIQMIPRRAFRGATDIKNLQLDKNHISCIEDGAF 174
Query: 291 KSLFSLKLVKIN 302
+++ L+++ +N
Sbjct: 175 RAMRVLEVLTLN 186
Score = 61 (26.5 bits), Expect = 4.0e-09, Sum P(2) = 4.0e-09
Identities = 32/180 (17%), Positives = 64/180 (35%)
Query: 367 LVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSL 425
+ +I L N + S+ AF +L + ++ N + ++ F G +L S+ L GN +
Sbjct: 307 MTEIRLEQNGIKSVPPGAFSSYKRLRRIDLSNNQ-ISEIAPDAFHGLRSLNSLVLYGNKI 365
Query: 426 SHLEASHFP-LERISFLDLSDNPLHC-------DCNXXXXXXXXXXXXKSTMETTTVAYE 477
+ L F L + L L+ N +HC D ++ + T +
Sbjct: 366 TDLPRGVFDGLSALELLLLNANKIHCVRVNVFQDLENLSLLSLYDNKIQTLAKGTFAPLK 425
Query: 478 MTSNTSISPGTTTEAQRVDRIIKNNHSLTIVLNNLKCSSPPDIKGLEVKAVPENSVHCES 537
++ + + S I + +CSSP + + + C +
Sbjct: 426 SIQTLHLAQNPFVCDCGLKWLADFLRSNPIETSGARCSSPRRLANKRISQIKSKKFRCSA 485
Score = 58 (25.5 bits), Expect = 3.7e-05, Sum P(3) = 3.7e-05
Identities = 55/259 (21%), Positives = 102/259 (39%)
Query: 52 EVQTIILRENRISNVHYTLSFYIE-LRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEI 110
+++ + L +N IS + + L L L+ N I+ + +F + KL + +N +
Sbjct: 155 DIKNLQLDKNHISCIEDGAFRAMRVLEVLTLNNNNISAIPISSFNHMPKLRTFRLHWNSL 214
Query: 111 SALSKDTF--KGLKELKTLDLSYNKISVINKTAFRDTLHL-ELLILSFNNITYFEDSEIF 167
+ ++ + L++ L L Y + S A L+L EL F + S
Sbjct: 215 RCDCQLSWLSQWLRQRPALGL-YTQCS---SPAHLHGLNLAELQKKDFTCAGALDSSPQP 270
Query: 168 SSLKSLRILKLDN--NQILDVPNNVLSNLPH---QSLHYLYLNENLIETVLDNSFPFTLT 222
L S + + N I+D L+ +P +S+ + L +N I++V +F +
Sbjct: 271 CGLASGSCPPMCSCTNNIVDCRGKGLTAIPANMPESMTEIRLEQNGIKSVPPGAFS-SYK 329
Query: 223 NLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNF 282
L + L LR+L+ +P LSAL L L+ N
Sbjct: 330 RLRRIDLSNNQISEIAPDAFHGLRSLNSLVLYGNKITDLPRGVFDGLSALELLLLNANKI 389
Query: 283 SNIDSVAFKSLFSLKLVKI 301
+ F+ L +L L+ +
Sbjct: 390 HCVRVNVFQDLENLSLLSL 408
Score = 56 (24.8 bits), Expect = 7.6e-10, Sum P(3) = 7.6e-10
Identities = 16/52 (30%), Positives = 28/52 (53%)
Query: 384 FVDNIQLETVIINENMN-LKQLPSK-LFQGNTNLKSVSLKGNSLSHLEASHF 433
F +++ L T + N N L L + LF+ T+LK ++L N ++ +E F
Sbjct: 531 FPEHLPLSTTELRLNNNDLSILEATGLFRPLTHLKKINLSNNKITEIEDGAF 582
Score = 55 (24.4 bits), Expect = 9.6e-10, Sum P(3) = 9.6e-10
Identities = 18/62 (29%), Positives = 32/62 (51%)
Query: 168 SSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTL 227
S+ + L++L L NN+I + N +N+ L L L+ N + + F L++L L
Sbjct: 780 SAFRQLQLLDLSNNKISSLTNTSFTNM--SQLTTLILSYNALRCIPPLVFG-GLSSLRLL 836
Query: 228 AL 229
+L
Sbjct: 837 SL 838
Score = 48 (22.0 bits), Expect = 2.5e-18, Sum P(4) = 2.5e-18
Identities = 13/39 (33%), Positives = 23/39 (58%)
Query: 269 LSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNL 307
L+ L ++LS N + I+ AF+ S+ V+++L NL
Sbjct: 561 LTHLKKINLSNNKITEIEDGAFEGASSV--VELHLTANL 597
Score = 45 (20.9 bits), Expect = 6.3e-07, Sum P(3) = 6.3e-07
Identities = 18/87 (20%), Positives = 38/87 (43%)
Query: 337 GTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFVDNIQLETVIIN 396
G + L L GN +++ F L +L+L+ +N + + F D L + +
Sbjct: 351 GLRSLNSLVLYGNKITDLPRGVFDGLSALELLLLNA-NKIHCVRVNVFQDLENLSLLSLY 409
Query: 397 ENMNLKQLPSKLFQGNTNLKSVSLKGN 423
+N ++ L F +++++ L N
Sbjct: 410 DN-KIQTLAKGTFAPLKSIQTLHLAQN 435
Score = 44 (20.5 bits), Expect = 4.7e-16, Sum P(4) = 4.7e-16
Identities = 11/34 (32%), Positives = 20/34 (58%)
Query: 269 LSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
L +L +L L GN +++ F L +L+L+ +N
Sbjct: 352 LRSLNSLVLYGNKITDLPRGVFDGLSALELLLLN 385
Score = 40 (19.1 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 7/23 (30%), Positives = 12/23 (52%)
Query: 513 KCSSPPDIKGLEVKAVPENSVHC 535
+CSSP + GL + + + C
Sbjct: 238 QCSSPAHLHGLNLAELQKKDFTC 260
Score = 39 (18.8 bits), Expect = 2.5e-18, Sum P(4) = 2.5e-18
Identities = 6/23 (26%), Positives = 12/23 (52%)
Query: 513 KCSSPPDIKGLEVKAVPENSVHC 535
+C+ P ++G + P N+ C
Sbjct: 891 RCAGPQGMEGKLLLTTPGNTFQC 913
>UNIPROTKB|F1Q3G2 [details] [associations]
symbol:SLIT3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IEA] [GO:0061364
"apoptotic process involved in luteolysis" evidence=IEA]
[GO:0051414 "response to cortisol stimulus" evidence=IEA]
[GO:0050919 "negative chemotaxis" evidence=IEA] [GO:0048846 "axon
extension involved in axon guidance" evidence=IEA] [GO:0048495
"Roundabout binding" evidence=IEA] [GO:0035385 "Roundabout
signaling pathway" evidence=IEA] [GO:0032870 "cellular response to
hormone stimulus" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0010629 "negative regulation of gene
expression" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0005615 "extracellular space"
evidence=IEA] [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0008285 GO:GO:0005615 GO:GO:0030308 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887
PROSITE:PS01186 GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791
SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
GO:GO:0070100 Pfam:PF12661 Pfam:PF01463 GO:GO:0051414
GeneTree:ENSGT00700000104083 GO:GO:0050919 GO:GO:0035385
GO:GO:0061364 OMA:SVDCHGL EMBL:AAEX03003028 EMBL:AAEX03003027
Ensembl:ENSCAFT00000026988 Uniprot:F1Q3G2
Length = 1319
Score = 183 (69.5 bits), Expect = 3.7e-18, Sum P(4) = 3.7e-18
Identities = 49/165 (29%), Positives = 84/165 (50%)
Query: 18 NKAICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHY-TLSFYIEL 76
N CPS C C + ++ C GL +P L + I L +N I ++ + Y +L
Sbjct: 73 NSISCPSACTCSNNIVD--CRGKGLTEIPANLPEGIVEIRLEQNSIKSIPAGAFTQYKKL 130
Query: 77 RSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISV 136
+ +D+S N+I+ + F+ L +L + N+I+ L+K F GL L+ L L+ NKI+
Sbjct: 131 KRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITELAKGLFDGLVSLQLLLLNANKINC 190
Query: 137 INKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNN 181
+ F+D +L LL L N + +F+ L++++ L L N
Sbjct: 191 LRVNTFQDLQNLNLLSLYDNKLQTISKG-LFAPLQAIQTLHLAQN 234
Score = 175 (66.7 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 43/135 (31%), Positives = 66/135 (48%)
Query: 22 CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSFYIELRSLDL 81
CP +C C + + C++ GL +P + +V + L N ++ V LS L +DL
Sbjct: 522 CPEQCTCLETVVR--CSNRGLHTLPKGIPKDVTELYLEGNHLTAVPRELSALRHLTLIDL 579
Query: 82 SVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTA 141
S N I VL ++ F + L L +SYN + + F GL+ L+ L L N IS + + +
Sbjct: 580 SNNSIGVLTNYTFSNMSHLSTLILSYNRLRCIPIHAFDGLRSLRVLTLHGNDISSVPEGS 639
Query: 142 FRDTLHLELLILSFN 156
F D L L L N
Sbjct: 640 FSDLTSLSHLALGTN 654
Score = 158 (60.7 bits), Expect = 2.1e-15, Sum P(4) = 2.1e-15
Identities = 43/134 (32%), Positives = 74/134 (55%)
Query: 74 IELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNK 133
+E+R L N I + + F KL ++IS N+IS ++ D F+GLK L +L L NK
Sbjct: 107 VEIR---LEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNK 163
Query: 134 ISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSN 193
I+ + K F + L+LL+L+ N I + F L++L +L L +N++ + + +
Sbjct: 164 ITELAKGLFDGLVSLQLLLLNANKINCLRVNT-FQDLQNLNLLSLYDNKLQTISKGLFA- 221
Query: 194 LPHQSLHYLYLNEN 207
P Q++ L+L +N
Sbjct: 222 -PLQAIQTLHLAQN 234
Score = 157 (60.3 bits), Expect = 7.0e-15, Sum P(3) = 7.0e-15
Identities = 48/163 (29%), Positives = 77/163 (47%)
Query: 21 ICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSF--YIELRS 78
+CP +C+C + C++ L +P L V + L +N IS + T F LR
Sbjct: 301 VCPEKCRC--EGTIVDCSNQKLARIPSHLPEYVTDLRLNDNEISVLEATGIFKKLPNLRK 358
Query: 79 LDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVIN 138
++LS NKI + F+ + L ++ N++ + F+GL LKTL L N I+ ++
Sbjct: 359 INLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRMFRGLSSLKTLMLRSNLITCVS 418
Query: 139 KTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNN 181
F + LL L N IT F++L SL + L +N
Sbjct: 419 NDTFAGLSSVRLLSLYDNRITTITPGA-FTTLVSLSTINLLSN 460
Score = 138 (53.6 bits), Expect = 9.2e-05, Sum P(2) = 9.2e-05
Identities = 37/105 (35%), Positives = 53/105 (50%)
Query: 103 LNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFE 162
L + N ++A+ ++ L+ L +DLS N I V+ F + HL LILS+N +
Sbjct: 554 LYLEGNHLTAVPRE-LSALRHLTLIDLSNNSIGVLTNYTFSNMSHLSTLILSYNRLRCIP 612
Query: 163 DSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNEN 207
F L+SLR+L L N I VP S+L SL +L L N
Sbjct: 613 -IHAFDGLRSLRVLTLHGNDISSVPEGSFSDLT--SLSHLALGTN 654
Score = 124 (48.7 bits), Expect = 3.7e-18, Sum P(4) = 3.7e-18
Identities = 40/123 (32%), Positives = 63/123 (51%)
Query: 335 PLGTLK-CDRLDLSGNNFSNIDSVAFKSLFSLK-LVKINLIPN-LDSIDQRAFVDNIQLE 391
P G K L L GN+ + + + L +L+ L I+L N + + F + L
Sbjct: 544 PKGIPKDVTELYLEGNHLTAVP----RELSALRHLTLIDLSNNSIGVLTNYTFSNMSHLS 599
Query: 392 TVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHL-EASHFPLERISFLDLSDNPLHC 450
T+I++ N L+ +P F G +L+ ++L GN +S + E S L +S L L NPLHC
Sbjct: 600 TLILSYN-RLRCIPIHAFDGLRSLRVLTLHGNDISSVPEGSFSDLTSLSHLALGTNPLHC 658
Query: 451 DCN 453
DC+
Sbjct: 659 DCS 661
Score = 93 (37.8 bits), Expect = 1.1e-08, Sum P(4) = 1.1e-08
Identities = 36/111 (32%), Positives = 53/111 (47%)
Query: 119 KGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKL 178
+G+ E++ L N I I AF L+ + +S N I+ + F LKSL L L
Sbjct: 104 EGIVEIR---LEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAP-DAFQGLKSLTSLVL 159
Query: 179 DNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLAL 229
N+I ++ + L SL L LN N I + N+F L NL+ L+L
Sbjct: 160 YGNKITELAKGLFDGLV--SLQLLLLNANKINCLRVNTFQ-DLQNLNLLSL 207
Score = 92 (37.4 bits), Expect = 4.2e-08, Sum P(3) = 4.2e-08
Identities = 60/265 (22%), Positives = 104/265 (39%)
Query: 29 FDQKLEASCTDAGLEVVPIQLNPEVQTIILRENR-ISNVHYT-LSFYIELRSLDLSVNKI 86
+D KL+ GL P+Q +QT+ L +N + + H L+ Y++ ++ S +
Sbjct: 208 YDNKLQT--ISKGL-FAPLQA---IQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARC 261
Query: 87 NV---LGSHNF-EYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAF 142
+ L + + ++K + S + S S + F L + + N+
Sbjct: 262 SSPRRLANKRIGQIKSKKFRCSGSEDYRSRFSSECFMDLVCPEKCRCEGTIVDCSNQKLA 321
Query: 143 RDTLHLELLI----LSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQS 198
R HL + L+ N I+ E + IF L +LR + L NN+I +V S
Sbjct: 322 RIPSHLPEYVTDLRLNDNEISVLEATGIFKKLPNLRKINLSNNKIKEVREGAFDGAA--S 379
Query: 199 LHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXX 258
+ L L N +ETV F L++L TL L L ++
Sbjct: 380 VQELMLTGNQLETVHGRMFR-GLSSLKTLMLRSNLITCVSNDTFAGLSSVRLLSLYDNRI 438
Query: 259 XAIPTKQLSKLSALVNLDLSGNNFS 283
I + L +L ++L N F+
Sbjct: 439 TTITPGAFTTLVSLSTINLLSNPFN 463
Score = 89 (36.4 bits), Expect = 3.8e-14, Sum P(3) = 3.8e-14
Identities = 29/106 (27%), Positives = 57/106 (53%)
Query: 344 LDLSGNNFSNIDSVA-FKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNL 401
L L+ N S +++ FK L +L+ KINL N + + + AF ++ +++ N L
Sbjct: 334 LRLNDNEISVLEATGIFKKLPNLR--KINLSNNKIKEVREGAFDGAASVQELMLTGNQ-L 390
Query: 402 KQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDN 446
+ + ++F+G ++LK++ L+ N ++ + F L + L L DN
Sbjct: 391 ETVHGRMFRGLSSLKTLMLRSNLITCVSNDTFAGLSSVRLLSLYDN 436
Score = 68 (29.0 bits), Expect = 5.1e-12, Sum P(3) = 5.1e-12
Identities = 29/110 (26%), Positives = 47/110 (42%)
Query: 171 KSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALX 230
K + L L+ N + VP LS L H +L + L+ N I + + +F +++L TL L
Sbjct: 549 KDVTELYLEGNHLTAVPRE-LSALRHLTL--IDLSNNSIGVLTNYTFS-NMSHLSTLILS 604
Query: 231 XXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGN 280
LR+L ++P S L++L +L L N
Sbjct: 605 YNRLRCIPIHAFDGLRSLRVLTLHGNDISSVPEGSFSDLTSLSHLALGTN 654
Score = 63 (27.2 bits), Expect = 4.8e-12, Sum P(4) = 4.8e-12
Identities = 19/59 (32%), Positives = 30/59 (50%)
Query: 390 LETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFPLERISFLDLSDNPL 448
LETV+ N L LP + + T L L+GN L+ + L ++ +DLS+N +
Sbjct: 529 LETVVRCSNRGLHTLPKGIPKDVTELY---LEGNHLTAVPRELSALRHLTLIDLSNNSI 584
Score = 56 (24.8 bits), Expect = 6.3e-11, Sum P(2) = 6.3e-11
Identities = 34/156 (21%), Positives = 56/156 (35%)
Query: 395 IN-ENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPLHCDC 452
IN N +K++ F G +++ + L GN L + F L + L L N + C
Sbjct: 359 INLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRMFRGLSSLKTLMLRSNLITCVS 418
Query: 453 NXXXXXXXXXXXX-----KSTMET----TTVAYEMTSNTSISP-GTTTEAQRVDRIIKNN 502
N + T T TT+ T N +P + + ++
Sbjct: 419 NDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNCHLAWLGKWLRKR 478
Query: 503 HSLTIVLNNLKCSSPPDIKGLEVKAVPENSVHCESN 538
IV N +C P +K + ++ V CE N
Sbjct: 479 R---IVSGNPRCQKPFFLKEIPIQDVAIQDFTCEGN 511
Score = 54 (24.1 bits), Expect = 1.3e-10, Sum P(3) = 1.3e-10
Identities = 18/59 (30%), Positives = 32/59 (54%)
Query: 392 TVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHF--PLERISFLDLSDNPL 448
T++ N L ++PS L + T+L+ L N +S LEA+ L + ++LS+N +
Sbjct: 311 TIVDCSNQKLARIPSHLPEYVTDLR---LNDNEISVLEATGIFKKLPNLRKINLSNNKI 366
Score = 54 (24.1 bits), Expect = 1.3e-10, Sum P(3) = 1.3e-10
Identities = 21/89 (23%), Positives = 41/89 (46%)
Query: 337 GTLKCDRLDLSGNNFSNIDSVAFKSLFSLK--LVKINLIPNLDSIDQRAFVDNIQLETVI 394
G L L+GN + F+ L SLK +++ NLI + + D A + +++L ++
Sbjct: 376 GAASVQELMLTGNQLETVHGRMFRGLSSLKTLMLRSNLITCVSN-DTFAGLSSVRLLSLY 434
Query: 395 INENMNLKQLPSKLFQGNTNLKSVSLKGN 423
N + + F +L +++L N
Sbjct: 435 DNR---ITTITPGAFTTLVSLSTINLLSN 460
Score = 52 (23.4 bits), Expect = 0.00039, Sum P(3) = 0.00039
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 260 AIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSL 296
+IP ++ L +D+S N S+I AF+ L SL
Sbjct: 118 SIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSL 154
Score = 50 (22.7 bits), Expect = 3.4e-10, Sum P(3) = 3.4e-10
Identities = 14/45 (31%), Positives = 21/45 (46%)
Query: 261 IPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIP 305
IP L +L L L GN+ S++ +F L SL + + P
Sbjct: 611 IPIHAFDGLRSLRVLTLHGNDISSVPEGSFSDLTSLSHLALGTNP 655
Score = 50 (22.7 bits), Expect = 0.00062, Sum P(3) = 0.00062
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 269 LSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
L +L +L L GN + + F L SL+L+ +N
Sbjct: 151 LKSLTSLVLYGNKITELAKGLFDGLVSLQLLLLN 184
Score = 49 (22.3 bits), Expect = 4.3e-10, Sum P(3) = 4.3e-10
Identities = 12/37 (32%), Positives = 21/37 (56%)
Query: 260 AIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSL 296
A+P ++LS L L +DLS N+ + + F ++ L
Sbjct: 563 AVP-RELSALRHLTLIDLSNNSIGVLTNYTFSNMSHL 598
Score = 46 (21.3 bits), Expect = 3.7e-18, Sum P(4) = 3.7e-18
Identities = 12/37 (32%), Positives = 21/37 (56%)
Query: 270 SALVNLDLSGNNFSNIDSVAFKSLFSLK--LVKINLI 304
+++ L L+GN + F+ L SLK +++ NLI
Sbjct: 378 ASVQELMLTGNQLETVHGRMFRGLSSLKTLMLRSNLI 414
Score = 45 (20.9 bits), Expect = 4.7e-18, Sum P(4) = 4.7e-18
Identities = 36/150 (24%), Positives = 58/150 (38%)
Query: 164 SEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHY---LYLNENLIETVLDNSFPFT 220
SE F L + + I+D N L+ +P Y L LN+N I +VL+ + F
Sbjct: 294 SECFMDLVCPEKCRCEGT-IVDCSNQKLARIPSHLPEYVTDLRLNDNEI-SVLEATGIFK 351
Query: 221 -LTNLHTLALXXXXXXXXXXXX---XVTLRTLHXXXXXXXXXXAIPTKQLSKLSALV--- 273
L NL + L +++ L + LS L L+
Sbjct: 352 KLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRMFRGLSSLKTLMLRS 411
Query: 274 NLD--LSGNNFSNIDSVAFKSLFSLKLVKI 301
NL +S + F+ + SV SL+ ++ I
Sbjct: 412 NLITCVSNDTFAGLSSVRLLSLYDNRITTI 441
Score = 43 (20.2 bits), Expect = 3.7e-18, Sum P(4) = 3.7e-18
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 496 DRIIKNNHSLTIVLNNLKCSSPPDIKG 522
D +NN + +NN C PP+ G
Sbjct: 799 DNDCENNATCVDGINNYVCVCPPNYTG 825
>RGD|69311 [details] [associations]
symbol:Slit3 "slit homolog 3 (Drosophila)" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005615 "extracellular
space" evidence=IEA;ISO] [GO:0007411 "axon guidance" evidence=ISO]
[GO:0007420 "brain development" evidence=IEP] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA;ISO] [GO:0009887
"organ morphogenesis" evidence=IEA;ISO] [GO:0010629 "negative
regulation of gene expression" evidence=IEA;ISO] [GO:0016020
"membrane" evidence=IDA] [GO:0021510 "spinal cord development"
evidence=IEP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA;ISO]
[GO:0032870 "cellular response to hormone stimulus"
evidence=IEA;ISO] [GO:0035385 "Roundabout signaling pathway"
evidence=IEA;ISO] [GO:0048495 "Roundabout binding" evidence=IEA;ISO]
[GO:0048846 "axon extension involved in axon guidance"
evidence=IEA;ISO] [GO:0050919 "negative chemotaxis"
evidence=IEA;ISO] [GO:0051414 "response to cortisol stimulus"
evidence=IEA;ISO] [GO:0061364 "apoptotic process involved in
luteolysis" evidence=IEA;ISO] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IEA;ISO] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0021834 "chemorepulsion involved
in embryonic olfactory bulb interneuron precursor migration"
evidence=ISO] InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 RGD:69311 GO:GO:0008285 GO:GO:0005615
GO:GO:0007420 GO:GO:0016020 GO:GO:0030308 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887
PROSITE:PS01186 GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791
SMART:SM00282 PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
GO:GO:0070100 Pfam:PF12661 Pfam:PF01463 GO:GO:0051414 GO:GO:0050919
GO:GO:0035385 GO:GO:0061364 HOGENOM:HOG000116120 HOVERGEN:HBG057959
OrthoDB:EOG4D7Z4T CTD:6586 KO:K06850 EMBL:AB011531 IPI:IPI00207574
PIR:T13953 RefSeq:NP_112611.1 UniGene:Rn.12298
ProteinModelPortal:O88280 SMR:O88280 IntAct:O88280 STRING:O88280
PRIDE:O88280 GeneID:83467 KEGG:rno:83467 UCSC:RGD:69311
InParanoid:O88280 NextBio:615863 ArrayExpress:O88280
Genevestigator:O88280 GermOnline:ENSRNOG00000007377 Uniprot:O88280
Length = 1523
Score = 189 (71.6 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 43/135 (31%), Positives = 69/135 (51%)
Query: 22 CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSFYIELRSLDL 81
CP +C C + + C++ GL +P + +V + L N ++ V LS + +L +DL
Sbjct: 725 CPEQCTCVETVVR--CSNRGLHTLPKGMPKDVTELYLEGNHLTAVPKELSTFRQLTLIDL 782
Query: 82 SVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTA 141
S N I++L +H F + L L +SYN + + F GL+ L+ L L N IS + + +
Sbjct: 783 SNNSISMLTNHTFSNMSHLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGS 842
Query: 142 FRDTLHLELLILSFN 156
F D L L L N
Sbjct: 843 FNDLTSLSHLALGIN 857
Score = 188 (71.2 bits), Expect = 3.7e-18, Sum P(3) = 3.7e-18
Identities = 55/189 (29%), Positives = 93/189 (49%)
Query: 20 AICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNV-HYTLSFYIELRS 78
A CP++C C ++ C GL VP + + + L N I+ + + LR
Sbjct: 32 AACPTKCTCSAASVD--CHGLGLRAVPRGIPRNAERLDLDRNNITRITKMDFTGLKNLRV 89
Query: 79 LDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVIN 138
L L N+++V+ F+ +L L ++ N++ L + F+ +L LDLS N+I I
Sbjct: 90 LHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDLSENQIQGIP 149
Query: 139 KTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQS 198
+ AFR ++ L L N+I+ ED F +L+ L IL L+NN I + +++P
Sbjct: 150 RKAFRGVTGVKNLQLDNNHISCIEDGA-FRALRDLEILTLNNNNISRILVTSFNHMP--K 206
Query: 199 LHYLYLNEN 207
+ L L+ N
Sbjct: 207 IRTLRLHSN 215
Score = 180 (68.4 bits), Expect = 2.0e-16, Sum P(4) = 2.0e-16
Identities = 49/165 (29%), Positives = 82/165 (49%)
Query: 18 NKAICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSF-YIEL 76
N CPS C C + ++ C GL +P L + I L +N I ++ Y +L
Sbjct: 276 NSLSCPSACSCSNNIVD--CRGKGLTEIPANLPEGIVEIRLEQNSIKSIPAGAFIQYKKL 333
Query: 77 RSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISV 136
+ +D+S N+I+ + F+ L +L + N+I+ + K F GL L+ L L+ NKI+
Sbjct: 334 KRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLNANKINC 393
Query: 137 INKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNN 181
+ F+D +L LL L N + +F+ L+S++ L L N
Sbjct: 394 LRVNTFQDLQNLNLLSLYDNKLQTISKG-LFAPLQSIQTLHLAQN 437
Score = 161 (61.7 bits), Expect = 2.4e-14, Sum P(4) = 2.4e-14
Identities = 45/134 (33%), Positives = 74/134 (55%)
Query: 74 IELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNK 133
+E+R L N I + + F KL ++IS N+IS ++ D F+GLK L +L L NK
Sbjct: 310 VEIR---LEQNSIKSIPAGAFIQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNK 366
Query: 134 ISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSN 193
I+ I K F + L+LL+L+ N I + F L++L +L L +N++ + + +
Sbjct: 367 ITEIPKGLFDGLVSLQLLLLNANKINCLRVNT-FQDLQNLNLLSLYDNKLQTISKGLFA- 424
Query: 194 LPHQSLHYLYLNEN 207
P QS+ L+L +N
Sbjct: 425 -PLQSIQTLHLAQN 437
Score = 156 (60.0 bits), Expect = 3.7e-14, Sum P(3) = 3.7e-14
Identities = 50/164 (30%), Positives = 79/164 (48%)
Query: 21 ICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTII-LRENRISNVHYTLSF--YIELR 77
+CP +C+C + C++ L +P L PE T + L +N I+ + T F LR
Sbjct: 504 VCPEKCRC--EGTIVDCSNQKLSRIPSHL-PEYTTDLRLNDNDIAVLEATGIFKKLPNLR 560
Query: 78 SLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVI 137
++LS N+I + F+ + L ++ N++ + F+GL LKTL L N IS +
Sbjct: 561 KINLSNNRIKEVREGAFDGAAGVQELMLTGNQLETMHGRMFRGLSGLKTLMLRSNLISCV 620
Query: 138 NKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNN 181
N F + LL L N IT F++L SL + L +N
Sbjct: 621 NNDTFAGLSSVRLLSLYDNRITTISPGA-FTTLVSLSTINLLSN 663
Score = 154 (59.3 bits), Expect = 1.9e-14, Sum P(3) = 1.9e-14
Identities = 41/132 (31%), Positives = 70/132 (53%)
Query: 53 VQTIILRENRISNVHY-TLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEIS 111
++ + L +N++S + +L L L+ NK+ VL F+ KL L++S N+I
Sbjct: 87 LRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDLSENQIQ 146
Query: 112 ALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLK 171
+ + F+G+ +K L L N IS I AFR LE+L L+ NNI+ + F+ +
Sbjct: 147 GIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTS-FNHMP 205
Query: 172 SLRILKLDNNQI 183
+R L+L +N +
Sbjct: 206 KIRTLRLHSNHL 217
Score = 153 (58.9 bits), Expect = 2.4e-14, Sum P(3) = 2.4e-14
Identities = 47/151 (31%), Positives = 74/151 (49%)
Query: 79 LDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVIN 138
LDL N I + +F L L++ N++S + + F+ LK+L+ L L+ NK+ V+
Sbjct: 66 LDLDRNNITRITKMDFTGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLP 125
Query: 139 KTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQS 198
+ F+ T L L LS N I + F + ++ L+LDNN I + + L +
Sbjct: 126 ELLFQSTPKLTRLDLSENQIQGIP-RKAFRGVTGVKNLQLDNNHISCIEDGAFRAL--RD 182
Query: 199 LHYLYLNENLIETVLDNSFPFTLTNLHTLAL 229
L L LN N I +L SF + + TL L
Sbjct: 183 LEILTLNNNNISRILVTSFNH-MPKIRTLRL 212
Score = 134 (52.2 bits), Expect = 0.00086, Sum P(2) = 0.00086
Identities = 35/100 (35%), Positives = 54/100 (54%)
Query: 103 LNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFE 162
L + N ++A+ K+ ++L +DLS N IS++ F + HL LILS+N +
Sbjct: 757 LYLEGNHLTAVPKE-LSTFRQLTLIDLSNNSISMLTNHTFSNMSHLSTLILSYNRLRCIP 815
Query: 163 DSEIFSSLKSLRILKLDNNQILDVPN---NVLSNLPHQSL 199
F+ L+SLR+L L N I VP N L++L H +L
Sbjct: 816 -VHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLAL 854
Score = 129 (50.5 bits), Expect = 3.7e-18, Sum P(3) = 3.7e-18
Identities = 39/116 (33%), Positives = 57/116 (49%)
Query: 340 KCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINEN 398
K R+D+S N S+I AF+ L SL + L N + I + F + L+ +++N N
Sbjct: 332 KLKRIDISKNQISDIAPDAFQGLKSL--TSLVLYGNKITEIPKGLFDGLVSLQLLLLNAN 389
Query: 399 MNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHF-PLERISFLDLSDNPLHCDCN 453
+ L FQ NL +SL N L + F PL+ I L L+ NP CDC+
Sbjct: 390 -KINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSIQTLHLAQNPFVCDCH 444
Score = 124 (48.7 bits), Expect = 2.6e-17, Sum P(4) = 2.6e-17
Identities = 40/122 (32%), Positives = 61/122 (50%)
Query: 335 PLGTLK-CDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLET 392
P G K L L GN+ + + S F +L I+L N + + F + L T
Sbjct: 747 PKGMPKDVTELYLEGNHLTAVPKEL--STFR-QLTLIDLSNNSISMLTNHTFSNMSHLST 803
Query: 393 VIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHL-EASHFPLERISFLDLSDNPLHCD 451
+I++ N L+ +P F G +L+ ++L GN +S + E S L +S L L NPLHCD
Sbjct: 804 LILSYN-RLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGINPLHCD 862
Query: 452 CN 453
C+
Sbjct: 863 CS 864
Score = 96 (38.9 bits), Expect = 2.0e-08, Sum P(3) = 2.0e-08
Identities = 30/100 (30%), Positives = 50/100 (50%)
Query: 119 KGL-KELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILK 177
+G+ + + LDL N I+ I K F +L +L L N ++ E F LK L L+
Sbjct: 57 RGIPRNAERLDLDRNNITRITKMDFTGLKNLRVLHLEDNQVSVIERGA-FQDLKQLERLR 115
Query: 178 LDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSF 217
L+ N++ +P + + P L L L+EN I+ + +F
Sbjct: 116 LNKNKLQVLPELLFQSTP--KLTRLDLSENQIQGIPRKAF 153
Score = 88 (36.0 bits), Expect = 5.8e-14, Sum P(3) = 5.8e-14
Identities = 29/106 (27%), Positives = 57/106 (53%)
Query: 344 LDLSGNNFSNIDSVA-FKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNL 401
L L+ N+ + +++ FK L +L+ KINL N + + + AF ++ +++ N L
Sbjct: 537 LRLNDNDIAVLEATGIFKKLPNLR--KINLSNNRIKEVREGAFDGAAGVQELMLTGNQ-L 593
Query: 402 KQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDN 446
+ + ++F+G + LK++ L+ N +S + F L + L L DN
Sbjct: 594 ETMHGRMFRGLSGLKTLMLRSNLISCVNNDTFAGLSSVRLLSLYDN 639
Score = 82 (33.9 bits), Expect = 5.0e-07, Sum P(3) = 5.0e-07
Identities = 30/127 (23%), Positives = 51/127 (40%)
Query: 176 LKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXX 235
L LD N I + + L ++L L+L +N + + +F L L L L
Sbjct: 66 LDLDRNNITRITKMDFTGL--KNLRVLHLEDNQVSVIERGAFQ-DLKQLERLRLNKNKLQ 122
Query: 236 XXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFS 295
+ L IP K ++ + NL L N+ S I+ AF++L
Sbjct: 123 VLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRALRD 182
Query: 296 LKLVKIN 302
L+++ +N
Sbjct: 183 LEILTLN 189
Score = 81 (33.6 bits), Expect = 2.1e-06, Sum P(3) = 2.1e-06
Identities = 39/157 (24%), Positives = 59/157 (37%)
Query: 127 LDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDV 186
+D S K+S I T L L + N+I E + IF L +LR + L NN+I +V
Sbjct: 516 VDCSNQKLSRIPSHLPEYTTDLRL---NDNDIAVLEATGIFKKLPNLRKINLSNNRIKEV 572
Query: 187 PNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLR 246
+ L L N +ET+ F L+ L TL L L
Sbjct: 573 REGAFDGAA--GVQELMLTGNQLETMHGRMFR-GLSGLKTLMLRSNLISCVNNDTFAGLS 629
Query: 247 TLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFS 283
++ I + L +L ++L N F+
Sbjct: 630 SVRLLSLYDNRITTISPGAFTTLVSLSTINLLSNPFN 666
Score = 60 (26.2 bits), Expect = 4.0e-11, Sum P(3) = 4.0e-11
Identities = 59/287 (20%), Positives = 110/287 (38%)
Query: 180 NNQILDVPNNVLSNLPH---QSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXX 236
+N I+D L+ +P + + + L +N I+++ +F L + +
Sbjct: 287 SNNIVDCRGKGLTEIPANLPEGIVEIRLEQNSIKSIPAGAF-IQYKKLKRIDISKNQISD 345
Query: 237 XXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSL 296
L++L IP L +L L L+ N + + F+ L +L
Sbjct: 346 IAPDAFQGLKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNL 405
Query: 297 KLVKINLIPN-LDSIDQXXXXXXXXXXXXXXXXXAF----SLTPLGT-LKCDRLDLSGNN 350
L ++L N L +I + F L L L+ + ++ SG
Sbjct: 406 NL--LSLYDNKLQTISKGLFAPLQSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGAR 463
Query: 351 FSNIDSVAFKSLFSLKLVKINLIPNLD---SIDQRAFVDNIQLE------TVIINENMNL 401
S+ +A K + +K K + D F+D + E T++ N L
Sbjct: 464 CSSPRRLANKRISQIKSKKFRCSGSEDYRNRFSSECFMDLVCPEKCRCEGTIVDCSNQKL 523
Query: 402 KQLPSKLFQGNTNLKSVSLKGNSLSHLEASHF--PLERISFLDLSDN 446
++PS L + T+L+ L N ++ LEA+ L + ++LS+N
Sbjct: 524 SRIPSHLPEYTTDLR---LNDNDIAVLEATGIFKKLPNLRKINLSNN 567
Score = 58 (25.5 bits), Expect = 4.7e-10, Sum P(3) = 4.7e-10
Identities = 26/110 (23%), Positives = 46/110 (41%)
Query: 171 KSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALX 230
K + L L+ N + VP LS + L + L+ N I + +++F +++L TL L
Sbjct: 752 KDVTELYLEGNHLTAVPKE-LSTF--RQLTLIDLSNNSISMLTNHTFS-NMSHLSTLILS 807
Query: 231 XXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGN 280
LR+L ++P + L++L +L L N
Sbjct: 808 YNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGIN 857
Score = 57 (25.1 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 34/156 (21%), Positives = 55/156 (35%)
Query: 395 IN-ENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPLHCDC 452
IN N +K++ F G ++ + L GN L + F L + L L N + C
Sbjct: 562 INLSNNRIKEVREGAFDGAAGVQELMLTGNQLETMHGRMFRGLSGLKTLMLRSNLISCVN 621
Query: 453 NXXXXXXXXXXXXK------STMET---TTVAYEMTSNTSISP-GTTTEAQRVDRIIKNN 502
N +T+ TT+ T N +P + R ++
Sbjct: 622 NDTFAGLSSVRLLSLYDNRITTISPGAFTTLVSLSTINLLSNPFNCNCHMAWLGRWLRKR 681
Query: 503 HSLTIVLNNLKCSSPPDIKGLEVKAVPENSVHCESN 538
IV N +C P +K + ++ V CE N
Sbjct: 682 R---IVSGNPRCQKPFFLKEIPIQDVAIQDFTCEGN 714
Score = 55 (24.4 bits), Expect = 1.3e-10, Sum P(3) = 1.3e-10
Identities = 14/45 (31%), Positives = 23/45 (51%)
Query: 261 IPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIP 305
IP + L +L L L GN+ S++ +F L SL + + + P
Sbjct: 814 IPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGINP 858
Score = 52 (23.4 bits), Expect = 2.6e-10, Sum P(3) = 2.6e-10
Identities = 13/37 (35%), Positives = 21/37 (56%)
Query: 260 AIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSL 296
A+P K+LS L +DLS N+ S + + F ++ L
Sbjct: 766 AVP-KELSTFRQLTLIDLSNNSISMLTNHTFSNMSHL 801
Score = 47 (21.6 bits), Expect = 8.2e-10, Sum P(3) = 8.2e-10
Identities = 21/89 (23%), Positives = 41/89 (46%)
Query: 337 GTLKCDRLDLSGNNFSNIDSVAFKSLFSLK--LVKINLIPNLDSIDQRAFVDNIQLETVI 394
G L L+GN + F+ L LK +++ NLI +++ D A + +++L ++
Sbjct: 579 GAAGVQELMLTGNQLETMHGRMFRGLSGLKTLMLRSNLISCVNN-DTFAGLSSVRLLSLY 637
Query: 395 INENMNLKQLPSKLFQGNTNLKSVSLKGN 423
N + P F +L +++L N
Sbjct: 638 DNRITTIS--PGA-FTTLVSLSTINLLSN 663
Score = 39 (18.8 bits), Expect = 3.7e-18, Sum P(3) = 3.7e-18
Identities = 8/27 (29%), Positives = 13/27 (48%)
Query: 496 DRIIKNNHSLTIVLNNLKCSSPPDIKG 522
D +N+ + +NN C PP+ G
Sbjct: 1002 DNDCENSATCVDGINNYACVCPPNYTG 1028
Score = 39 (18.8 bits), Expect = 2.6e-17, Sum P(4) = 2.6e-17
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 275 LDLSGNNFSNIDSVAFKSLFSLK--LVKINLI 304
L L+GN + F+ L LK +++ NLI
Sbjct: 586 LMLTGNQLETMHGRMFRGLSGLKTLMLRSNLI 617
>UNIPROTKB|O88280 [details] [associations]
symbol:Slit3 "Slit homolog 3 protein" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
RGD:69311 GO:GO:0008285 GO:GO:0005615 GO:GO:0007420 GO:GO:0016020
GO:GO:0030308 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887 PROSITE:PS01186
GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791 SMART:SM00282
PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 GO:GO:0048846 GO:GO:0070100 Pfam:PF12661
Pfam:PF01463 GO:GO:0051414 GO:GO:0050919 GO:GO:0035385
GO:GO:0061364 HOGENOM:HOG000116120 HOVERGEN:HBG057959
OrthoDB:EOG4D7Z4T CTD:6586 KO:K06850 EMBL:AB011531 IPI:IPI00207574
PIR:T13953 RefSeq:NP_112611.1 UniGene:Rn.12298
ProteinModelPortal:O88280 SMR:O88280 IntAct:O88280 STRING:O88280
PRIDE:O88280 GeneID:83467 KEGG:rno:83467 UCSC:RGD:69311
InParanoid:O88280 NextBio:615863 ArrayExpress:O88280
Genevestigator:O88280 GermOnline:ENSRNOG00000007377 Uniprot:O88280
Length = 1523
Score = 189 (71.6 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 43/135 (31%), Positives = 69/135 (51%)
Query: 22 CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSFYIELRSLDL 81
CP +C C + + C++ GL +P + +V + L N ++ V LS + +L +DL
Sbjct: 725 CPEQCTCVETVVR--CSNRGLHTLPKGMPKDVTELYLEGNHLTAVPKELSTFRQLTLIDL 782
Query: 82 SVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTA 141
S N I++L +H F + L L +SYN + + F GL+ L+ L L N IS + + +
Sbjct: 783 SNNSISMLTNHTFSNMSHLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGS 842
Query: 142 FRDTLHLELLILSFN 156
F D L L L N
Sbjct: 843 FNDLTSLSHLALGIN 857
Score = 188 (71.2 bits), Expect = 3.7e-18, Sum P(3) = 3.7e-18
Identities = 55/189 (29%), Positives = 93/189 (49%)
Query: 20 AICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNV-HYTLSFYIELRS 78
A CP++C C ++ C GL VP + + + L N I+ + + LR
Sbjct: 32 AACPTKCTCSAASVD--CHGLGLRAVPRGIPRNAERLDLDRNNITRITKMDFTGLKNLRV 89
Query: 79 LDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVIN 138
L L N+++V+ F+ +L L ++ N++ L + F+ +L LDLS N+I I
Sbjct: 90 LHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDLSENQIQGIP 149
Query: 139 KTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQS 198
+ AFR ++ L L N+I+ ED F +L+ L IL L+NN I + +++P
Sbjct: 150 RKAFRGVTGVKNLQLDNNHISCIEDGA-FRALRDLEILTLNNNNISRILVTSFNHMP--K 206
Query: 199 LHYLYLNEN 207
+ L L+ N
Sbjct: 207 IRTLRLHSN 215
Score = 180 (68.4 bits), Expect = 2.0e-16, Sum P(4) = 2.0e-16
Identities = 49/165 (29%), Positives = 82/165 (49%)
Query: 18 NKAICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSF-YIEL 76
N CPS C C + ++ C GL +P L + I L +N I ++ Y +L
Sbjct: 276 NSLSCPSACSCSNNIVD--CRGKGLTEIPANLPEGIVEIRLEQNSIKSIPAGAFIQYKKL 333
Query: 77 RSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISV 136
+ +D+S N+I+ + F+ L +L + N+I+ + K F GL L+ L L+ NKI+
Sbjct: 334 KRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLNANKINC 393
Query: 137 INKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNN 181
+ F+D +L LL L N + +F+ L+S++ L L N
Sbjct: 394 LRVNTFQDLQNLNLLSLYDNKLQTISKG-LFAPLQSIQTLHLAQN 437
Score = 161 (61.7 bits), Expect = 2.4e-14, Sum P(4) = 2.4e-14
Identities = 45/134 (33%), Positives = 74/134 (55%)
Query: 74 IELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNK 133
+E+R L N I + + F KL ++IS N+IS ++ D F+GLK L +L L NK
Sbjct: 310 VEIR---LEQNSIKSIPAGAFIQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNK 366
Query: 134 ISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSN 193
I+ I K F + L+LL+L+ N I + F L++L +L L +N++ + + +
Sbjct: 367 ITEIPKGLFDGLVSLQLLLLNANKINCLRVNT-FQDLQNLNLLSLYDNKLQTISKGLFA- 424
Query: 194 LPHQSLHYLYLNEN 207
P QS+ L+L +N
Sbjct: 425 -PLQSIQTLHLAQN 437
Score = 156 (60.0 bits), Expect = 3.7e-14, Sum P(3) = 3.7e-14
Identities = 50/164 (30%), Positives = 79/164 (48%)
Query: 21 ICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTII-LRENRISNVHYTLSF--YIELR 77
+CP +C+C + C++ L +P L PE T + L +N I+ + T F LR
Sbjct: 504 VCPEKCRC--EGTIVDCSNQKLSRIPSHL-PEYTTDLRLNDNDIAVLEATGIFKKLPNLR 560
Query: 78 SLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVI 137
++LS N+I + F+ + L ++ N++ + F+GL LKTL L N IS +
Sbjct: 561 KINLSNNRIKEVREGAFDGAAGVQELMLTGNQLETMHGRMFRGLSGLKTLMLRSNLISCV 620
Query: 138 NKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNN 181
N F + LL L N IT F++L SL + L +N
Sbjct: 621 NNDTFAGLSSVRLLSLYDNRITTISPGA-FTTLVSLSTINLLSN 663
Score = 154 (59.3 bits), Expect = 1.9e-14, Sum P(3) = 1.9e-14
Identities = 41/132 (31%), Positives = 70/132 (53%)
Query: 53 VQTIILRENRISNVHY-TLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEIS 111
++ + L +N++S + +L L L+ NK+ VL F+ KL L++S N+I
Sbjct: 87 LRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDLSENQIQ 146
Query: 112 ALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLK 171
+ + F+G+ +K L L N IS I AFR LE+L L+ NNI+ + F+ +
Sbjct: 147 GIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTS-FNHMP 205
Query: 172 SLRILKLDNNQI 183
+R L+L +N +
Sbjct: 206 KIRTLRLHSNHL 217
Score = 153 (58.9 bits), Expect = 2.4e-14, Sum P(3) = 2.4e-14
Identities = 47/151 (31%), Positives = 74/151 (49%)
Query: 79 LDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVIN 138
LDL N I + +F L L++ N++S + + F+ LK+L+ L L+ NK+ V+
Sbjct: 66 LDLDRNNITRITKMDFTGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLP 125
Query: 139 KTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQS 198
+ F+ T L L LS N I + F + ++ L+LDNN I + + L +
Sbjct: 126 ELLFQSTPKLTRLDLSENQIQGIP-RKAFRGVTGVKNLQLDNNHISCIEDGAFRAL--RD 182
Query: 199 LHYLYLNENLIETVLDNSFPFTLTNLHTLAL 229
L L LN N I +L SF + + TL L
Sbjct: 183 LEILTLNNNNISRILVTSFNH-MPKIRTLRL 212
Score = 134 (52.2 bits), Expect = 0.00086, Sum P(2) = 0.00086
Identities = 35/100 (35%), Positives = 54/100 (54%)
Query: 103 LNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFE 162
L + N ++A+ K+ ++L +DLS N IS++ F + HL LILS+N +
Sbjct: 757 LYLEGNHLTAVPKE-LSTFRQLTLIDLSNNSISMLTNHTFSNMSHLSTLILSYNRLRCIP 815
Query: 163 DSEIFSSLKSLRILKLDNNQILDVPN---NVLSNLPHQSL 199
F+ L+SLR+L L N I VP N L++L H +L
Sbjct: 816 -VHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLAL 854
Score = 129 (50.5 bits), Expect = 3.7e-18, Sum P(3) = 3.7e-18
Identities = 39/116 (33%), Positives = 57/116 (49%)
Query: 340 KCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINEN 398
K R+D+S N S+I AF+ L SL + L N + I + F + L+ +++N N
Sbjct: 332 KLKRIDISKNQISDIAPDAFQGLKSL--TSLVLYGNKITEIPKGLFDGLVSLQLLLLNAN 389
Query: 399 MNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHF-PLERISFLDLSDNPLHCDCN 453
+ L FQ NL +SL N L + F PL+ I L L+ NP CDC+
Sbjct: 390 -KINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSIQTLHLAQNPFVCDCH 444
Score = 124 (48.7 bits), Expect = 2.6e-17, Sum P(4) = 2.6e-17
Identities = 40/122 (32%), Positives = 61/122 (50%)
Query: 335 PLGTLK-CDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLET 392
P G K L L GN+ + + S F +L I+L N + + F + L T
Sbjct: 747 PKGMPKDVTELYLEGNHLTAVPKEL--STFR-QLTLIDLSNNSISMLTNHTFSNMSHLST 803
Query: 393 VIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHL-EASHFPLERISFLDLSDNPLHCD 451
+I++ N L+ +P F G +L+ ++L GN +S + E S L +S L L NPLHCD
Sbjct: 804 LILSYN-RLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGINPLHCD 862
Query: 452 CN 453
C+
Sbjct: 863 CS 864
Score = 96 (38.9 bits), Expect = 2.0e-08, Sum P(3) = 2.0e-08
Identities = 30/100 (30%), Positives = 50/100 (50%)
Query: 119 KGL-KELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILK 177
+G+ + + LDL N I+ I K F +L +L L N ++ E F LK L L+
Sbjct: 57 RGIPRNAERLDLDRNNITRITKMDFTGLKNLRVLHLEDNQVSVIERGA-FQDLKQLERLR 115
Query: 178 LDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSF 217
L+ N++ +P + + P L L L+EN I+ + +F
Sbjct: 116 LNKNKLQVLPELLFQSTP--KLTRLDLSENQIQGIPRKAF 153
Score = 88 (36.0 bits), Expect = 5.8e-14, Sum P(3) = 5.8e-14
Identities = 29/106 (27%), Positives = 57/106 (53%)
Query: 344 LDLSGNNFSNIDSVA-FKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNL 401
L L+ N+ + +++ FK L +L+ KINL N + + + AF ++ +++ N L
Sbjct: 537 LRLNDNDIAVLEATGIFKKLPNLR--KINLSNNRIKEVREGAFDGAAGVQELMLTGNQ-L 593
Query: 402 KQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDN 446
+ + ++F+G + LK++ L+ N +S + F L + L L DN
Sbjct: 594 ETMHGRMFRGLSGLKTLMLRSNLISCVNNDTFAGLSSVRLLSLYDN 639
Score = 82 (33.9 bits), Expect = 5.0e-07, Sum P(3) = 5.0e-07
Identities = 30/127 (23%), Positives = 51/127 (40%)
Query: 176 LKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXX 235
L LD N I + + L ++L L+L +N + + +F L L L L
Sbjct: 66 LDLDRNNITRITKMDFTGL--KNLRVLHLEDNQVSVIERGAFQ-DLKQLERLRLNKNKLQ 122
Query: 236 XXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFS 295
+ L IP K ++ + NL L N+ S I+ AF++L
Sbjct: 123 VLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRALRD 182
Query: 296 LKLVKIN 302
L+++ +N
Sbjct: 183 LEILTLN 189
Score = 81 (33.6 bits), Expect = 2.1e-06, Sum P(3) = 2.1e-06
Identities = 39/157 (24%), Positives = 59/157 (37%)
Query: 127 LDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDV 186
+D S K+S I T L L + N+I E + IF L +LR + L NN+I +V
Sbjct: 516 VDCSNQKLSRIPSHLPEYTTDLRL---NDNDIAVLEATGIFKKLPNLRKINLSNNRIKEV 572
Query: 187 PNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLR 246
+ L L N +ET+ F L+ L TL L L
Sbjct: 573 REGAFDGAA--GVQELMLTGNQLETMHGRMFR-GLSGLKTLMLRSNLISCVNNDTFAGLS 629
Query: 247 TLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFS 283
++ I + L +L ++L N F+
Sbjct: 630 SVRLLSLYDNRITTISPGAFTTLVSLSTINLLSNPFN 666
Score = 60 (26.2 bits), Expect = 4.0e-11, Sum P(3) = 4.0e-11
Identities = 59/287 (20%), Positives = 110/287 (38%)
Query: 180 NNQILDVPNNVLSNLPH---QSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXX 236
+N I+D L+ +P + + + L +N I+++ +F L + +
Sbjct: 287 SNNIVDCRGKGLTEIPANLPEGIVEIRLEQNSIKSIPAGAF-IQYKKLKRIDISKNQISD 345
Query: 237 XXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSL 296
L++L IP L +L L L+ N + + F+ L +L
Sbjct: 346 IAPDAFQGLKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNL 405
Query: 297 KLVKINLIPN-LDSIDQXXXXXXXXXXXXXXXXXAF----SLTPLGT-LKCDRLDLSGNN 350
L ++L N L +I + F L L L+ + ++ SG
Sbjct: 406 NL--LSLYDNKLQTISKGLFAPLQSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGAR 463
Query: 351 FSNIDSVAFKSLFSLKLVKINLIPNLD---SIDQRAFVDNIQLE------TVIINENMNL 401
S+ +A K + +K K + D F+D + E T++ N L
Sbjct: 464 CSSPRRLANKRISQIKSKKFRCSGSEDYRNRFSSECFMDLVCPEKCRCEGTIVDCSNQKL 523
Query: 402 KQLPSKLFQGNTNLKSVSLKGNSLSHLEASHF--PLERISFLDLSDN 446
++PS L + T+L+ L N ++ LEA+ L + ++LS+N
Sbjct: 524 SRIPSHLPEYTTDLR---LNDNDIAVLEATGIFKKLPNLRKINLSNN 567
Score = 58 (25.5 bits), Expect = 4.7e-10, Sum P(3) = 4.7e-10
Identities = 26/110 (23%), Positives = 46/110 (41%)
Query: 171 KSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALX 230
K + L L+ N + VP LS + L + L+ N I + +++F +++L TL L
Sbjct: 752 KDVTELYLEGNHLTAVPKE-LSTF--RQLTLIDLSNNSISMLTNHTFS-NMSHLSTLILS 807
Query: 231 XXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGN 280
LR+L ++P + L++L +L L N
Sbjct: 808 YNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGIN 857
Score = 57 (25.1 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 34/156 (21%), Positives = 55/156 (35%)
Query: 395 IN-ENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPLHCDC 452
IN N +K++ F G ++ + L GN L + F L + L L N + C
Sbjct: 562 INLSNNRIKEVREGAFDGAAGVQELMLTGNQLETMHGRMFRGLSGLKTLMLRSNLISCVN 621
Query: 453 NXXXXXXXXXXXXK------STMET---TTVAYEMTSNTSISP-GTTTEAQRVDRIIKNN 502
N +T+ TT+ T N +P + R ++
Sbjct: 622 NDTFAGLSSVRLLSLYDNRITTISPGAFTTLVSLSTINLLSNPFNCNCHMAWLGRWLRKR 681
Query: 503 HSLTIVLNNLKCSSPPDIKGLEVKAVPENSVHCESN 538
IV N +C P +K + ++ V CE N
Sbjct: 682 R---IVSGNPRCQKPFFLKEIPIQDVAIQDFTCEGN 714
Score = 55 (24.4 bits), Expect = 1.3e-10, Sum P(3) = 1.3e-10
Identities = 14/45 (31%), Positives = 23/45 (51%)
Query: 261 IPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIP 305
IP + L +L L L GN+ S++ +F L SL + + + P
Sbjct: 814 IPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGINP 858
Score = 52 (23.4 bits), Expect = 2.6e-10, Sum P(3) = 2.6e-10
Identities = 13/37 (35%), Positives = 21/37 (56%)
Query: 260 AIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSL 296
A+P K+LS L +DLS N+ S + + F ++ L
Sbjct: 766 AVP-KELSTFRQLTLIDLSNNSISMLTNHTFSNMSHL 801
Score = 47 (21.6 bits), Expect = 8.2e-10, Sum P(3) = 8.2e-10
Identities = 21/89 (23%), Positives = 41/89 (46%)
Query: 337 GTLKCDRLDLSGNNFSNIDSVAFKSLFSLK--LVKINLIPNLDSIDQRAFVDNIQLETVI 394
G L L+GN + F+ L LK +++ NLI +++ D A + +++L ++
Sbjct: 579 GAAGVQELMLTGNQLETMHGRMFRGLSGLKTLMLRSNLISCVNN-DTFAGLSSVRLLSLY 637
Query: 395 INENMNLKQLPSKLFQGNTNLKSVSLKGN 423
N + P F +L +++L N
Sbjct: 638 DNRITTIS--PGA-FTTLVSLSTINLLSN 663
Score = 39 (18.8 bits), Expect = 3.7e-18, Sum P(3) = 3.7e-18
Identities = 8/27 (29%), Positives = 13/27 (48%)
Query: 496 DRIIKNNHSLTIVLNNLKCSSPPDIKG 522
D +N+ + +NN C PP+ G
Sbjct: 1002 DNDCENSATCVDGINNYACVCPPNYTG 1028
Score = 39 (18.8 bits), Expect = 2.6e-17, Sum P(4) = 2.6e-17
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 275 LDLSGNNFSNIDSVAFKSLFSLK--LVKINLI 304
L L+GN + F+ L LK +++ NLI
Sbjct: 586 LMLTGNQLETMHGRMFRGLSGLKTLMLRSNLI 617
>MGI|MGI:1315202 [details] [associations]
symbol:Slit3 "slit homolog 3 (Drosophila)" species:10090
"Mus musculus" [GO:0005102 "receptor binding" evidence=TAS]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005615 "extracellular
space" evidence=ISO;IDA] [GO:0005739 "mitochondrion" evidence=ISO]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IEA] [GO:0007411
"axon guidance" evidence=ISO;IDA] [GO:0008285 "negative regulation
of cell proliferation" evidence=IGI] [GO:0009887 "organ
morphogenesis" evidence=IGI;IMP] [GO:0010629 "negative regulation
of gene expression" evidence=IGI] [GO:0016020 "membrane"
evidence=ISO] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0035385 "Roundabout signaling pathway" evidence=ISO]
[GO:0048495 "Roundabout binding" evidence=ISO] [GO:0048846 "axon
extension involved in axon guidance" evidence=ISO] [GO:0050919
"negative chemotaxis" evidence=ISO] [GO:0070100 "negative
regulation of chemokine-mediated signaling pathway" evidence=ISO]
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
MGI:MGI:1315202 GO:GO:0005739 GO:GO:0007411 GO:GO:0008285
GO:GO:0005615 GO:GO:0007420 GO:GO:0030308 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005102 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0009887 PROSITE:PS01186 GO:GO:0032870
GO:GO:0010629 InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025
GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 GO:GO:0048846 GO:GO:0070100 Pfam:PF12661 Pfam:PF01463
GO:GO:0051414 GeneTree:ENSGT00700000104083 GO:GO:0050919
GO:GO:0035385 GO:GO:0061364 HOGENOM:HOG000116120 HOVERGEN:HBG057959
OrthoDB:EOG4D7Z4T CTD:6586 KO:K06850 ChiTaRS:SLIT3 EMBL:AF144629
EMBL:AL669839 EMBL:AL669856 EMBL:AL731688 EMBL:AL732401
EMBL:AL732630 IPI:IPI00664551 RefSeq:NP_035542.2 UniGene:Mm.478604
ProteinModelPortal:Q9WVB4 SMR:Q9WVB4 STRING:Q9WVB4
PhosphoSite:Q9WVB4 PRIDE:Q9WVB4 Ensembl:ENSMUST00000069837
GeneID:20564 KEGG:mmu:20564 InParanoid:B1ATW4 OMA:SVDCHGL
NextBio:298861 Bgee:Q9WVB4 CleanEx:MM_SLIT3 Genevestigator:Q9WVB4
GermOnline:ENSMUSG00000056427 Uniprot:Q9WVB4
Length = 1523
Score = 187 (70.9 bits), Expect = 4.8e-18, Sum P(3) = 4.8e-18
Identities = 54/189 (28%), Positives = 93/189 (49%)
Query: 20 AICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNV-HYTLSFYIELRS 78
A CP++C C ++ C GL VP + + + L N I+ + + LR
Sbjct: 32 AACPTKCTCSAASVD--CHGLGLRAVPRGIPRNAERLDLDRNNITRITKMDFAGLKNLRV 89
Query: 79 LDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVIN 138
L L N+++++ F+ +L L ++ N++ L + F+ +L LDLS N+I I
Sbjct: 90 LHLEDNQVSIIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDLSENQIQGIP 149
Query: 139 KTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQS 198
+ AFR ++ L L N+I+ ED F +L+ L IL L+NN I + +++P
Sbjct: 150 RKAFRGVTGVKNLQLDNNHISCIEDGA-FRALRDLEILTLNNNNISRILVTSFNHMP--K 206
Query: 199 LHYLYLNEN 207
+ L L+ N
Sbjct: 207 IRTLRLHSN 215
Score = 187 (70.9 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 43/135 (31%), Positives = 69/135 (51%)
Query: 22 CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSFYIELRSLDL 81
CP +C C + + C++ GL +P + +V + L N ++ V LS + +L +DL
Sbjct: 725 CPEQCTCVETVVR--CSNRGLHALPKGMPKDVTELYLEGNHLTAVPKELSAFRQLTLIDL 782
Query: 82 SVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTA 141
S N I++L +H F + L L +SYN + + F GL+ L+ L L N IS + + +
Sbjct: 783 SNNSISMLTNHTFSNMSHLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGS 842
Query: 142 FRDTLHLELLILSFN 156
F D L L L N
Sbjct: 843 FNDLTSLSHLALGTN 857
Score = 180 (68.4 bits), Expect = 5.0e-17, Sum P(4) = 5.0e-17
Identities = 49/165 (29%), Positives = 82/165 (49%)
Query: 18 NKAICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHY-TLSFYIEL 76
N CPS C C + ++ C GL +P L + I L +N I ++ + Y +L
Sbjct: 276 NSLSCPSACSCSNNIVD--CRGKGLTEIPANLPEGIVEIRLEQNSIKSIPAGAFTQYKKL 333
Query: 77 RSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISV 136
+ +D+S N+I+ + F+ L +L + N+I+ + K F GL L+ L L+ NKI+
Sbjct: 334 KRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLNANKINC 393
Query: 137 INKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNN 181
+ F+D +L LL L N + +F L+S++ L L N
Sbjct: 394 LRVNTFQDLQNLNLLSLYDNKLQTISKG-LFVPLQSIQTLHLAQN 437
Score = 163 (62.4 bits), Expect = 3.6e-15, Sum P(4) = 3.6e-15
Identities = 45/134 (33%), Positives = 74/134 (55%)
Query: 74 IELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNK 133
+E+R L N I + + F KL ++IS N+IS ++ D F+GLK L +L L NK
Sbjct: 310 VEIR---LEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNK 366
Query: 134 ISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSN 193
I+ I K F + L+LL+L+ N I + F L++L +L L +N++ + +
Sbjct: 367 ITEIPKGLFDGLVSLQLLLLNANKINCLRVNT-FQDLQNLNLLSLYDNKLQTISKGLF-- 423
Query: 194 LPHQSLHYLYLNEN 207
+P QS+ L+L +N
Sbjct: 424 VPLQSIQTLHLAQN 437
Score = 154 (59.3 bits), Expect = 3.4e-14, Sum P(4) = 3.4e-14
Identities = 41/132 (31%), Positives = 70/132 (53%)
Query: 53 VQTIILRENRISNVHY-TLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEIS 111
++ + L +N++S + +L L L+ NK+ VL F+ KL L++S N+I
Sbjct: 87 LRVLHLEDNQVSIIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDLSENQIQ 146
Query: 112 ALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLK 171
+ + F+G+ +K L L N IS I AFR LE+L L+ NNI+ + F+ +
Sbjct: 147 GIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTS-FNHMP 205
Query: 172 SLRILKLDNNQI 183
+R L+L +N +
Sbjct: 206 KIRTLRLHSNHL 217
Score = 154 (59.3 bits), Expect = 3.8e-14, Sum P(3) = 3.8e-14
Identities = 50/164 (30%), Positives = 79/164 (48%)
Query: 21 ICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTII-LRENRISNVHYTLSF--YIELR 77
+CP +C+C + C++ L +P L PE T + L +N IS + T F LR
Sbjct: 504 VCPEKCRC--EGTIVDCSNQKLARIPSHL-PEYTTDLRLNDNDISVLEATGIFKKLPNLR 560
Query: 78 SLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVI 137
++LS N+I + F+ + L ++ N++ + F+GL LKTL L N IS +
Sbjct: 561 KINLSNNRIKEVREGAFDGAAGVQELMLTGNQLETMHGRMFRGLSSLKTLMLRSNLISCV 620
Query: 138 NKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNN 181
+ F + LL L N IT F++L SL + L +N
Sbjct: 621 SNDTFAGLSSVRLLSLYDNRITTITPGA-FTTLVSLSTINLLSN 663
Score = 152 (58.6 bits), Expect = 5.6e-14, Sum P(4) = 5.6e-14
Identities = 47/151 (31%), Positives = 74/151 (49%)
Query: 79 LDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVIN 138
LDL N I + +F L L++ N++S + + F+ LK+L+ L L+ NK+ V+
Sbjct: 66 LDLDRNNITRITKMDFAGLKNLRVLHLEDNQVSIIERGAFQDLKQLERLRLNKNKLQVLP 125
Query: 139 KTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQS 198
+ F+ T L L LS N I + F + ++ L+LDNN I + + L +
Sbjct: 126 ELLFQSTPKLTRLDLSENQIQGIP-RKAFRGVTGVKNLQLDNNHISCIEDGAFRAL--RD 182
Query: 199 LHYLYLNENLIETVLDNSFPFTLTNLHTLAL 229
L L LN N I +L SF + + TL L
Sbjct: 183 LEILTLNNNNISRILVTSFNH-MPKIRTLRL 212
Score = 138 (53.6 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 36/105 (34%), Positives = 55/105 (52%)
Query: 103 LNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFE 162
L + N ++A+ K+ ++L +DLS N IS++ F + HL LILS+N +
Sbjct: 757 LYLEGNHLTAVPKE-LSAFRQLTLIDLSNNSISMLTNHTFSNMSHLSTLILSYNRLRCIP 815
Query: 163 DSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNEN 207
F+ L+SLR+L L N I VP ++L SL +L L N
Sbjct: 816 -VHAFNGLRSLRVLTLHGNDISSVPEGSFNDLT--SLSHLALGTN 857
Score = 129 (50.5 bits), Expect = 4.8e-18, Sum P(3) = 4.8e-18
Identities = 39/116 (33%), Positives = 57/116 (49%)
Query: 340 KCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINEN 398
K R+D+S N S+I AF+ L SL + L N + I + F + L+ +++N N
Sbjct: 332 KLKRIDISKNQISDIAPDAFQGLKSL--TSLVLYGNKITEIPKGLFDGLVSLQLLLLNAN 389
Query: 399 MNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHF-PLERISFLDLSDNPLHCDCN 453
+ L FQ NL +SL N L + F PL+ I L L+ NP CDC+
Sbjct: 390 -KINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFVPLQSIQTLHLAQNPFVCDCH 444
Score = 126 (49.4 bits), Expect = 8.4e-18, Sum P(4) = 8.4e-18
Identities = 40/122 (32%), Positives = 61/122 (50%)
Query: 335 PLGTLK-CDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLET 392
P G K L L GN+ + + S F +L I+L N + + F + L T
Sbjct: 747 PKGMPKDVTELYLEGNHLTAVPKEL--SAFR-QLTLIDLSNNSISMLTNHTFSNMSHLST 803
Query: 393 VIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHL-EASHFPLERISFLDLSDNPLHCD 451
+I++ N L+ +P F G +L+ ++L GN +S + E S L +S L L NPLHCD
Sbjct: 804 LILSYN-RLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGTNPLHCD 862
Query: 452 CN 453
C+
Sbjct: 863 CS 864
Score = 96 (38.9 bits), Expect = 3.2e-08, Sum P(4) = 3.2e-08
Identities = 30/100 (30%), Positives = 50/100 (50%)
Query: 119 KGL-KELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILK 177
+G+ + + LDL N I+ I K F +L +L L N ++ E F LK L L+
Sbjct: 57 RGIPRNAERLDLDRNNITRITKMDFAGLKNLRVLHLEDNQVSIIERGA-FQDLKQLERLR 115
Query: 178 LDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSF 217
L+ N++ +P + + P L L L+EN I+ + +F
Sbjct: 116 LNKNKLQVLPELLFQSTP--KLTRLDLSENQIQGIPRKAF 153
Score = 92 (37.4 bits), Expect = 2.9e-14, Sum P(3) = 2.9e-14
Identities = 30/106 (28%), Positives = 58/106 (54%)
Query: 344 LDLSGNNFSNIDSVA-FKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNL 401
L L+ N+ S +++ FK L +L+ KINL N + + + AF ++ +++ N L
Sbjct: 537 LRLNDNDISVLEATGIFKKLPNLR--KINLSNNRIKEVREGAFDGAAGVQELMLTGNQ-L 593
Query: 402 KQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDN 446
+ + ++F+G ++LK++ L+ N +S + F L + L L DN
Sbjct: 594 ETMHGRMFRGLSSLKTLMLRSNLISCVSNDTFAGLSSVRLLSLYDN 639
Score = 91 (37.1 bits), Expect = 3.7e-14, Sum P(3) = 3.7e-14
Identities = 26/113 (23%), Positives = 59/113 (52%)
Query: 343 RLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNL 401
+++LS N + AF ++ ++ L N L+++ R F L+T+++ N+ +
Sbjct: 561 KINLSNNRIKEVREGAFDGAAGVQ--ELMLTGNQLETMHGRMFRGLSSLKTLMLRSNL-I 617
Query: 402 KQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPLHCDCN 453
+ + F G ++++ +SL N ++ + F L +S ++L NP +C+C+
Sbjct: 618 SCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNCH 670
Score = 88 (36.0 bits), Expect = 2.6e-07, Sum P(3) = 2.6e-07
Identities = 60/265 (22%), Positives = 106/265 (40%)
Query: 29 FDQKLEASCTDAGLEVVPIQLNPEVQTIILRENR-ISNVHYT-LSFYIELRSLDLSVNKI 86
+D KL+ GL VP+Q +QT+ L +N + + H L+ Y++ ++ S +
Sbjct: 411 YDNKLQT--ISKGL-FVPLQ---SIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARC 464
Query: 87 NV---LGSHNF-EYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAF 142
+ L + + ++K + S + + S + F L + + N+
Sbjct: 465 SSPRRLANKRISQIKSKKFRCSGSEDYRNRFSSECFMDLVCPEKCRCEGTIVDCSNQKLA 524
Query: 143 RDTLHL-EL---LILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQS 198
R HL E L L+ N+I+ E + IF L +LR + L NN+I +V
Sbjct: 525 RIPSHLPEYTTDLRLNDNDISVLEATGIFKKLPNLRKINLSNNRIKEVREGAFDGAA--G 582
Query: 199 LHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXX 258
+ L L N +ET+ F L++L TL L L ++
Sbjct: 583 VQELMLTGNQLETMHGRMFR-GLSSLKTLMLRSNLISCVSNDTFAGLSSVRLLSLYDNRI 641
Query: 259 XAIPTKQLSKLSALVNLDLSGNNFS 283
I + L +L ++L N F+
Sbjct: 642 TTITPGAFTTLVSLSTINLLSNPFN 666
Score = 81 (33.6 bits), Expect = 6.3e-07, Sum P(3) = 6.3e-07
Identities = 30/127 (23%), Positives = 51/127 (40%)
Query: 176 LKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXX 235
L LD N I + + L ++L L+L +N + + +F L L L L
Sbjct: 66 LDLDRNNITRITKMDFAGL--KNLRVLHLEDNQVSIIERGAFQ-DLKQLERLRLNKNKLQ 122
Query: 236 XXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFS 295
+ L IP K ++ + NL L N+ S I+ AF++L
Sbjct: 123 VLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRALRD 182
Query: 296 LKLVKIN 302
L+++ +N
Sbjct: 183 LEILTLN 189
Score = 60 (26.2 bits), Expect = 5.1e-11, Sum P(3) = 5.1e-11
Identities = 60/287 (20%), Positives = 110/287 (38%)
Query: 180 NNQILDVPNNVLSNLPH---QSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXX 236
+N I+D L+ +P + + + L +N I+++ +F L + +
Sbjct: 287 SNNIVDCRGKGLTEIPANLPEGIVEIRLEQNSIKSIPAGAFT-QYKKLKRIDISKNQISD 345
Query: 237 XXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSL 296
L++L IP L +L L L+ N + + F+ L +L
Sbjct: 346 IAPDAFQGLKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNL 405
Query: 297 KLVKINLIPN-LDSIDQXXXXXXXXXXXXXXXXXAF----SLTPLGT-LKCDRLDLSGNN 350
L ++L N L +I + F L L L+ + ++ SG
Sbjct: 406 NL--LSLYDNKLQTISKGLFVPLQSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGAR 463
Query: 351 FSNIDSVAFKSLFSLKLVKINLIPNLD---SIDQRAFVDNIQLE------TVIINENMNL 401
S+ +A K + +K K + D F+D + E T++ N L
Sbjct: 464 CSSPRRLANKRISQIKSKKFRCSGSEDYRNRFSSECFMDLVCPEKCRCEGTIVDCSNQKL 523
Query: 402 KQLPSKLFQGNTNLKSVSLKGNSLSHLEASHF--PLERISFLDLSDN 446
++PS L + T+L+ L N +S LEA+ L + ++LS+N
Sbjct: 524 ARIPSHLPEYTTDLR---LNDNDISVLEATGIFKKLPNLRKINLSNN 567
Score = 58 (25.5 bits), Expect = 4.7e-10, Sum P(3) = 4.7e-10
Identities = 24/110 (21%), Positives = 46/110 (41%)
Query: 171 KSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALX 230
K + L L+ N + VP + + + L + L+ N I + +++F +++L TL L
Sbjct: 752 KDVTELYLEGNHLTAVPKELSA---FRQLTLIDLSNNSISMLTNHTFS-NMSHLSTLILS 807
Query: 231 XXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGN 280
LR+L ++P + L++L +L L N
Sbjct: 808 YNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGTN 857
Score = 57 (25.1 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 34/156 (21%), Positives = 55/156 (35%)
Query: 395 IN-ENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPLHCDC 452
IN N +K++ F G ++ + L GN L + F L + L L N + C
Sbjct: 562 INLSNNRIKEVREGAFDGAAGVQELMLTGNQLETMHGRMFRGLSSLKTLMLRSNLISCVS 621
Query: 453 NXXXXXXXXXXXX-----KSTMET----TTVAYEMTSNTSISP-GTTTEAQRVDRIIKNN 502
N + T T TT+ T N +P + R ++
Sbjct: 622 NDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNCHMAWLGRWLRKR 681
Query: 503 HSLTIVLNNLKCSSPPDIKGLEVKAVPENSVHCESN 538
IV N +C P +K + ++ V C+ N
Sbjct: 682 R---IVSGNPRCQKPFFLKEIPIQDVAIQDFTCDGN 714
Score = 52 (23.4 bits), Expect = 3.3e-10, Sum P(3) = 3.3e-10
Identities = 13/37 (35%), Positives = 21/37 (56%)
Query: 260 AIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSL 296
A+P K+LS L +DLS N+ S + + F ++ L
Sbjct: 766 AVP-KELSAFRQLTLIDLSNNSISMLTNHTFSNMSHL 801
Score = 52 (23.4 bits), Expect = 3.3e-10, Sum P(3) = 3.3e-10
Identities = 14/45 (31%), Positives = 22/45 (48%)
Query: 261 IPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIP 305
IP + L +L L L GN+ S++ +F L SL + + P
Sbjct: 814 IPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGTNP 858
Score = 50 (22.7 bits), Expect = 5.2e-10, Sum P(3) = 5.2e-10
Identities = 21/89 (23%), Positives = 41/89 (46%)
Query: 337 GTLKCDRLDLSGNNFSNIDSVAFKSLFSLK--LVKINLIPNLDSIDQRAFVDNIQLETVI 394
G L L+GN + F+ L SLK +++ NLI + + D A + +++L ++
Sbjct: 579 GAAGVQELMLTGNQLETMHGRMFRGLSSLKTLMLRSNLISCVSN-DTFAGLSSVRLLSLY 637
Query: 395 INENMNLKQLPSKLFQGNTNLKSVSLKGN 423
N + + F +L +++L N
Sbjct: 638 DNR---ITTITPGAFTTLVSLSTINLLSN 663
Score = 43 (20.2 bits), Expect = 8.4e-18, Sum P(4) = 8.4e-18
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 275 LDLSGNNFSNIDSVAFKSLFSLK--LVKINLI 304
L L+GN + F+ L SLK +++ NLI
Sbjct: 586 LMLTGNQLETMHGRMFRGLSSLKTLMLRSNLI 617
Score = 41 (19.5 bits), Expect = 8.0e-17, Sum P(4) = 8.0e-17
Identities = 36/150 (24%), Positives = 57/150 (38%)
Query: 164 SEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHY---LYLNENLIETVLDNSFPFT 220
SE F L + + I+D N L+ +P Y L LN+N I +VL+ + F
Sbjct: 497 SECFMDLVCPEKCRCEGT-IVDCSNQKLARIPSHLPEYTTDLRLNDNDI-SVLEATGIFK 554
Query: 221 -LTNLHTLALXXXXXXXXXXXX---XVTLRTLHXXXXXXXXXXAIPTKQLSKLSALV--- 273
L NL + L ++ L + LS L L+
Sbjct: 555 KLPNLRKINLSNNRIKEVREGAFDGAAGVQELMLTGNQLETMHGRMFRGLSSLKTLMLRS 614
Query: 274 NLD--LSGNNFSNIDSVAFKSLFSLKLVKI 301
NL +S + F+ + SV SL+ ++ I
Sbjct: 615 NLISCVSNDTFAGLSSVRLLSLYDNRITTI 644
Score = 39 (18.8 bits), Expect = 4.8e-18, Sum P(3) = 4.8e-18
Identities = 8/27 (29%), Positives = 13/27 (48%)
Query: 496 DRIIKNNHSLTIVLNNLKCSSPPDIKG 522
D +N+ + +NN C PP+ G
Sbjct: 1002 DNDCENSATCVDGINNYACLCPPNYTG 1028
>UNIPROTKB|Q27972 [details] [associations]
symbol:CHAD "Chondroadherin" species:9913 "Bos taurus"
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005578
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
EMBL:U08018 IPI:IPI00711211 PIR:A53860 RefSeq:NP_776444.1
UniGene:Bt.91648 ProteinModelPortal:Q27972 IntAct:Q27972
STRING:Q27972 PRIDE:Q27972 GeneID:281069 KEGG:bta:281069 CTD:1101
HOGENOM:HOG000013150 HOVERGEN:HBG005324 InParanoid:Q27972 KO:K06248
OrthoDB:EOG4K9BCM NextBio:20805150 InterPro:IPR026906 Pfam:PF13306
Uniprot:Q27972
Length = 361
Score = 181 (68.8 bits), Expect = 5.0e-11, P = 5.0e-11
Identities = 59/224 (26%), Positives = 97/224 (43%)
Query: 79 LDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVIN 138
L+L N VL +++F L++L++ + +I ++ F+GLK+L L LS+N I V+
Sbjct: 58 LNLQRNNFPVLATNSFRAMPNLVSLHLQHCQIREVAAGAFRGLKQLIYLYLSHNDIRVLR 117
Query: 139 KTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQS 198
AF D L L L N +T + S L +L IL+L+NN+I ++ + +
Sbjct: 118 AGAFDDLTELTYLYLDHNKVTELPRG-LLSPLVNLFILQLNNNKIRELRSGAFQGA--KD 174
Query: 199 LHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXX 258
L +LYL+EN + ++ + + NL L LR +
Sbjct: 175 LRWLYLSENSLSSLQPGALD-DVENLAKFYLDRNQLSSYPSAALSKLRVVEELKLSHNPL 233
Query: 259 XAIPTKQLSKLSA-LVNLDLSGNNFSNIDSVAFKSLFSLKLVKI 301
+IP L L L N AF + +LK V +
Sbjct: 234 KSIPDNAFQSFGRYLETLWLDNTNLEKFSDGAFLGVTTLKHVHL 277
Score = 162 (62.1 bits), Expect = 7.3e-18, Sum P(2) = 7.3e-18
Identities = 53/194 (27%), Positives = 88/194 (45%)
Query: 20 AICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSFYI--ELR 77
A CP C C C GL+ +P +++ + + + L+ N V T SF L
Sbjct: 23 AACPQNCHCHSDLQHVICDKVGLQKIP-KVSEKTKLLNLQRNNFP-VLATNSFRAMPNLV 80
Query: 78 SLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVI 137
SL L +I + + F +L+ L +S+N+I L F L EL L L +NK++ +
Sbjct: 81 SLHLQHCQIREVAAGAFRGLKQLIYLYLSHNDIRVLRAGAFDDLTELTYLYLDHNKVTEL 140
Query: 138 NKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQ 197
+ ++L +L L+ N I S F K LR L L N + + L ++ +
Sbjct: 141 PRGLLSPLVNLFILQLNNNKIRELR-SGAFQGAKDLRWLYLSENSLSSLQPGALDDV--E 197
Query: 198 SLHYLYLNENLIET 211
+L YL+ N + +
Sbjct: 198 NLAKFYLDRNQLSS 211
Score = 141 (54.7 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 46/155 (29%), Positives = 77/155 (49%)
Query: 75 ELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKI 134
+L L LS N I VL + F+ +L L + +N+++ L + L L L L+ NKI
Sbjct: 102 QLIYLYLSHNDIRVLRAGAFDDLTELTYLYLDHNKVTELPRGLLSPLVNLFILQLNNNKI 161
Query: 135 SVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNL 194
+ AF+ L L LS N+++ + + +++L LD NQ+ P+ LS L
Sbjct: 162 RELRSGAFQGAKDLRWLYLSENSLSSLQPGAL-DDVENLAKFYLDRNQLSSYPSAALSKL 220
Query: 195 PHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLAL 229
+ + L L+ N ++++ DN+F L TL L
Sbjct: 221 --RVVEELKLSHNPLKSIPDNAFQSFGRYLETLWL 253
Score = 128 (50.1 bits), Expect = 7.3e-18, Sum P(2) = 7.3e-18
Identities = 38/108 (35%), Positives = 55/108 (50%)
Query: 346 LSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFVD-NIQLETVIINENMNLKQL 404
L N S+ S A L ++ +K++ P L SI AF LET+ + +N NL++
Sbjct: 204 LDRNQLSSYPSAALSKLRVVEELKLSHNP-LKSIPDNAFQSFGRYLETLWL-DNTNLEKF 261
Query: 405 PSKLFQGNTNLKSVSLKGNSLSHLEASHFPLERISFLDLSDNPLHCDC 452
F G T LK V L+ N L L S+FP + + L L++NP C C
Sbjct: 262 SDGAFLGVTTLKHVHLENNRLHQLP-SNFPFDSLETLTLTNNPWKCTC 308
Score = 123 (48.4 bits), Expect = 0.00015, P = 0.00015
Identities = 46/163 (28%), Positives = 74/163 (45%)
Query: 49 LNPEVQTIILR--ENRISNVHY-TLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNI 105
L+P V IL+ N+I + +LR L LS N ++ L + L +
Sbjct: 145 LSPLVNLFILQLNNNKIRELRSGAFQGAKDLRWLYLSENSLSSLQPGALDDVENLAKFYL 204
Query: 106 SYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDT-LHLELLILSFNNITYFEDS 164
N++S+ L+ ++ L LS+N + I AF+ +LE L L N+ F D
Sbjct: 205 DRNQLSSYPSAALSKLRVVEELKLSHNPLKSIPDNAFQSFGRYLETLWLDNTNLEKFSDG 264
Query: 165 EIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNEN 207
F + +L+ + L+NN++ +P SN P SL L L N
Sbjct: 265 A-FLGVTTLKHVHLENNRLHQLP----SNFPFDSLETLTLTNN 302
Score = 116 (45.9 bits), Expect = 0.00088, P = 0.00088
Identities = 48/179 (26%), Positives = 79/179 (44%)
Query: 52 EVQTIILRENRISNV-HYTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEI 110
E+ + L N+++ + LS + L L L+ NKI L S F+ L L +S N +
Sbjct: 126 ELTYLYLDHNKVTELPRGLLSPLVNLFILQLNNNKIRELRSGAFQGAKDLRWLYLSENSL 185
Query: 111 SALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSL 170
S+L ++ L L N++S A +E L LS N + D+ S
Sbjct: 186 SSLQPGALDDVENLAKFYLDRNQLSSYPSAALSKLRVVEELKLSHNPLKSIPDNAFQSFG 245
Query: 171 KSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLAL 229
+ L L LDN + + + +L +++L N + L ++FPF +L TL L
Sbjct: 246 RYLETLWLDNTNLEKFSDGAFLGVT--TLKHVHLENNRLHQ-LPSNFPFD--SLETLTL 299
>UNIPROTKB|F1NR92 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005576 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 Pfam:PF00054 SMART:SM00274 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR025875 Pfam:PF12799 InterPro:IPR006207
PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041 Pfam:PF01463
GeneTree:ENSGT00700000104083 EMBL:AADN02015249 EMBL:AADN02015250
EMBL:AADN02015251 EMBL:AADN02015252 EMBL:AADN02015253
EMBL:AADN02015254 EMBL:AADN02015255 EMBL:AADN02015256
EMBL:AADN02015257 EMBL:AADN02015258 EMBL:AADN02015259
EMBL:AADN02015260 EMBL:AADN02015261 EMBL:AADN02015262
EMBL:AADN02015263 EMBL:AADN02015264 EMBL:AADN02015265
EMBL:AADN02015266 EMBL:AADN02015267 EMBL:AADN02015268
EMBL:AADN02015269 EMBL:AADN02015270 EMBL:AADN02015271
IPI:IPI00813921 ProteinModelPortal:F1NR92
Ensembl:ENSGALT00000037317 ArrayExpress:F1NR92 Uniprot:F1NR92
Length = 1425
Score = 205 (77.2 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 48/135 (35%), Positives = 72/135 (53%)
Query: 22 CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSFYIELRSLDL 81
CP+ C C D + C++ GL+ +P + +V + L N+ + V LS Y L +DL
Sbjct: 623 CPAECTCLDTVVR--CSNKGLKALPKGIPKDVTELYLDGNQFTLVPKELSNYKHLTLIDL 680
Query: 82 SVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTA 141
S N+I+ L + +F +LL L +SYN + + TF GLK L+ L L N ISV+ + A
Sbjct: 681 SNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPARTFDGLKSLRLLSLHGNDISVVPEGA 740
Query: 142 FRDTLHLELLILSFN 156
F D L L + N
Sbjct: 741 FNDLSALSHLAIGAN 755
Score = 170 (64.9 bits), Expect = 1.1e-17, Sum P(4) = 1.1e-17
Identities = 50/156 (32%), Positives = 79/156 (50%)
Query: 22 CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHY-TLSFYIELRSLD 80
CP+ C C + ++ C GL +P L + I L +N I + S Y +LR +D
Sbjct: 166 CPAACTCSNNIVD--CRGKGLTEIPTNLPETITEIRLEQNSIKVIPPGAFSPYKKLRRID 223
Query: 81 LSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKT 140
LS N+I+ F+ L +L + N+I+ L K F+GL L+ L L+ NKI+ +
Sbjct: 224 LSNNQISEAAPDAFQGLRSLNSLVLYGNKITELPKGLFEGLFSLQLLLLNANKINCLRVD 283
Query: 141 AFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRIL 176
AF+D +L LL L N + FS L++++ L
Sbjct: 284 AFQDLHNLNLLSLYDNKLQTIAKGT-FSPLRAIQTL 318
Score = 156 (60.0 bits), Expect = 1.1e-16, Sum P(3) = 1.1e-16
Identities = 46/159 (28%), Positives = 73/159 (45%)
Query: 22 CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSF--YIELRSL 79
CP +C+C + C++ L +P + + L N S + T F +LR +
Sbjct: 402 CPEKCRC--EGTTVDCSNQKLNKIPDHIPQYTAELRLNNNEFSVLEATGIFKKLPQLRKI 459
Query: 80 DLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINK 139
+LS NKI + F+ + + L ++ N + + FKGL+ LKTL L N++S +
Sbjct: 460 NLSNNKITDIEEGAFDGASGVNELLLTSNRLETVRDKMFKGLESLKTLMLRSNRVSCVGN 519
Query: 140 TAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKL 178
+F + LL L N IT F +L SL L L
Sbjct: 520 DSFTGLSSVRLLSLYDNQITTVAPGS-FDTLHSLSTLNL 557
Score = 153 (58.9 bits), Expect = 8.2e-16, Sum P(4) = 8.2e-16
Identities = 45/152 (29%), Positives = 74/152 (48%)
Query: 76 LRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKIS 135
+ + L N I V+ F KL +++S N+IS + D F+GL+ L +L L NKI+
Sbjct: 195 ITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISEAAPDAFQGLRSLNSLVLYGNKIT 254
Query: 136 VINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLP 195
+ K F L+LL+L+ N I + F L +L +L L +N++ + S L
Sbjct: 255 ELPKGLFEGLFSLQLLLLNANKINCLR-VDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLR 313
Query: 196 H-QSLHYLYLNENLIETVLDNSFPFTLTNLHT 226
Q+L+ +L +N + D + LHT
Sbjct: 314 AIQTLYERHLAQNPF--ICDCHLKWLADYLHT 343
Score = 141 (54.7 bits), Expect = 1.1e-17, Sum P(4) = 1.1e-17
Identities = 42/123 (34%), Positives = 67/123 (54%)
Query: 335 PLGTLK-CDRLDLSGNNFSNIDSVAFKSLFSLK-LVKINLIPN-LDSIDQRAFVDNIQLE 391
P G K L L GN F+ + K L + K L I+L N + ++ ++F + QL
Sbjct: 645 PKGIPKDVTELYLDGNQFTLVP----KELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLL 700
Query: 392 TVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHF-PLERISFLDLSDNPLHC 450
T+I++ N L+ +P++ F G +L+ +SL GN +S + F L +S L + NPL+C
Sbjct: 701 TLILSYN-RLRCIPARTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 759
Query: 451 DCN 453
DCN
Sbjct: 760 DCN 762
Score = 134 (52.2 bits), Expect = 1.0e-15, Sum P(4) = 1.0e-15
Identities = 30/80 (37%), Positives = 47/80 (58%)
Query: 104 NISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFED 163
++S N+I A+ + F+G ++K L L YN+IS I AFR LE+L L+ NNIT
Sbjct: 25 DLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLSV 84
Query: 164 SEIFSSLKSLRILKLDNNQI 183
+ F+ + LR +L +N +
Sbjct: 85 AS-FNHMPKLRTFRLHSNNL 103
Score = 127 (49.8 bits), Expect = 0.00079, Sum P(2) = 0.00079
Identities = 34/105 (32%), Positives = 54/105 (51%)
Query: 103 LNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFE 162
L + N+ + + K+ K L +DLS N+IS ++ +F + L LILS+N +
Sbjct: 655 LYLDGNQFTLVPKE-LSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIP 713
Query: 163 DSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNEN 207
+ F LKSLR+L L N I VP ++L +L +L + N
Sbjct: 714 -ARTFDGLKSLRLLSLHGNDISVVPEGAFNDL--SALSHLAIGAN 755
Score = 110 (43.8 bits), Expect = 2.6e-13, Sum P(4) = 2.6e-13
Identities = 29/86 (33%), Positives = 47/86 (54%)
Query: 123 ELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQ 182
++K DLS N+I I + AFR + ++ L L +N I+ ED F +L+ L +L L+NN
Sbjct: 20 KIKISDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGA-FRALRDLEVLTLNNNN 78
Query: 183 ILDVPNNVLSNLPHQSLHYLYLNENL 208
I + +++P L+ N NL
Sbjct: 79 ITRLSVASFNHMPKLRTFRLHSN-NL 103
Score = 107 (42.7 bits), Expect = 5.2e-13, Sum P(4) = 5.2e-13
Identities = 24/85 (28%), Positives = 44/85 (51%)
Query: 74 IELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNK 133
++++ DLS N+I + F + NL + YN+IS + F+ L++L+ L L+ N
Sbjct: 19 LKIKISDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNN 78
Query: 134 ISVINKTAFRDTLHLELLILSFNNI 158
I+ ++ +F L L NN+
Sbjct: 79 ITRLSVASFNHMPKLRTFRLHSNNL 103
Score = 105 (42.0 bits), Expect = 1.2e-10, Sum P(3) = 1.2e-10
Identities = 38/119 (31%), Positives = 53/119 (44%)
Query: 340 KCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINEN 398
K R+DLS N S AF+ L SL + L N + + + F L+ +++N N
Sbjct: 218 KLRRIDLSNNQISEAAPDAFQGLRSLN--SLVLYGNKITELPKGLFEGLFSLQLLLLNAN 275
Query: 399 MNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHF-PLERISFL---DLSDNPLHCDCN 453
+ L FQ NL +SL N L + F PL I L L+ NP CDC+
Sbjct: 276 -KINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTLYERHLAQNPFICDCH 333
Score = 104 (41.7 bits), Expect = 2.6e-11, Sum P(3) = 2.6e-11
Identities = 40/148 (27%), Positives = 68/148 (45%)
Query: 16 KLNKAICPSRCQCFDQKLEASCTDAG-LEVVPI-QLNPEVQTIILRENRISNVHY-TLSF 72
KLNK P + +L + + LE I + P+++ I L N+I+++
Sbjct: 419 KLNKI--PDHIPQYTAELRLNNNEFSVLEATGIFKKLPQLRKINLSNNKITDIEEGAFDG 476
Query: 73 YIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYN 132
+ L L+ N++ + F+ L L + N +S + D+F GL ++ L L N
Sbjct: 477 ASGVNELLLTSNRLETVRDKMFKGLESLKTLMLRSNRVSCVGNDSFTGLSSVRLLSLYDN 536
Query: 133 KISVINKTAFRDTLH----LELLILSFN 156
+I+ + +F DTLH L LL FN
Sbjct: 537 QITTVAPGSF-DTLHSLSTLNLLANPFN 563
Score = 102 (41.0 bits), Expect = 3.0e-14, Sum P(3) = 3.0e-14
Identities = 33/108 (30%), Positives = 57/108 (52%)
Query: 344 LDLSGNNFSNIDSVA-FKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNL 401
L L+ N FS +++ FK L L+ KINL N + I++ AF + +++ N L
Sbjct: 434 LRLNNNEFSVLEATGIFKKLPQLR--KINLSNNKITDIEEGAFDGASGVNELLLTSN-RL 490
Query: 402 KQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPL 448
+ + K+F+G +LK++ L+ N +S + F L + L L DN +
Sbjct: 491 ETVRDKMFKGLESLKTLMLRSNRVSCVGNDSFTGLSSVRLLSLYDNQI 538
Score = 102 (41.0 bits), Expect = 4.1e-11, Sum P(3) = 4.1e-11
Identities = 40/158 (25%), Positives = 60/158 (37%)
Query: 126 TLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILD 185
T+D S K++ I + T L L + N + E + IF L LR + L NN+I D
Sbjct: 412 TVDCSNQKLNKIPDHIPQYTAELRL---NNNEFSVLEATGIFKKLPQLRKINLSNNKITD 468
Query: 186 VPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTL 245
+ ++ L L N +ETV D F L +L TL L L
Sbjct: 469 IEEGAFDGA--SGVNELLLTSNRLETVRDKMFK-GLESLKTLMLRSNRVSCVGNDSFTGL 525
Query: 246 RTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFS 283
++ + L +L L+L N F+
Sbjct: 526 SSVRLLSLYDNQITTVAPGSFDTLHSLSTLNLLANPFN 563
Score = 95 (38.5 bits), Expect = 1.6e-13, Sum P(3) = 1.6e-13
Identities = 27/113 (23%), Positives = 60/113 (53%)
Query: 343 RLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNL 401
+++LS N ++I+ AF + ++ L N L+++ + F L+T+++ N +
Sbjct: 458 KINLSNNKITDIEEGAFDGASGVN--ELLLTSNRLETVRDKMFKGLESLKTLMLRSN-RV 514
Query: 402 KQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPLHCDCN 453
+ + F G ++++ +SL N ++ + F L +S L+L NP +C+C+
Sbjct: 515 SCVGNDSFTGLSSVRLLSLYDNQITTVAPGSFDTLHSLSTLNLLANPFNCNCH 567
Score = 88 (36.0 bits), Expect = 8.0e-13, Sum P(3) = 8.0e-13
Identities = 33/110 (30%), Positives = 46/110 (41%)
Query: 171 KSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALX 230
K + L LD NQ VP LSN H +L + L+ N I T+ + SF +T L TL L
Sbjct: 650 KDVTELYLDGNQFTLVPKE-LSNYKHLTL--IDLSNNRISTLSNQSFS-NMTQLLTLILS 705
Query: 231 XXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGN 280
L++L +P + LSAL +L + N
Sbjct: 706 YNRLRCIPARTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGAN 755
Score = 76 (31.8 bits), Expect = 9.5e-08, Sum P(3) = 9.5e-08
Identities = 31/105 (29%), Positives = 50/105 (47%)
Query: 346 LSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNLKQL 404
L N+ I AF S + KL +I+L N + AF L ++++ N + +L
Sbjct: 200 LEQNSIKVIPPGAF-SPYK-KLRRIDLSNNQISEAAPDAFQGLRSLNSLVLYGN-KITEL 256
Query: 405 PSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPL 448
P LF+G +L+ + L N ++ L F L ++ L L DN L
Sbjct: 257 PKGLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKL 301
Score = 59 (25.8 bits), Expect = 8.6e-07, Sum P(3) = 8.6e-07
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 260 AIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
AIP K + NL L N S I+ AF++L L+++ +N
Sbjct: 33 AIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLN 75
Score = 56 (24.8 bits), Expect = 1.0e-15, Sum P(4) = 1.0e-15
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 269 LSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
L +L +L L GN + + F+ LFSL+L+ +N
Sbjct: 240 LRSLNSLVLYGNKITELPKGLFEGLFSLQLLLLN 273
Score = 56 (24.8 bits), Expect = 1.0e-15, Sum P(4) = 1.0e-15
Identities = 26/126 (20%), Positives = 51/126 (40%)
Query: 180 NNQILDVPNNVLSNLPH---QSLHYLYLNENLIETVLDNSF-PFTLTNLHTLALXXXXXX 235
+N I+D L+ +P +++ + L +N I+ + +F P+ L + L
Sbjct: 173 SNNIVDCRGKGLTEIPTNLPETITEIRLEQNSIKVIPPGAFSPYK--KLRRIDLSNNQIS 230
Query: 236 XXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFS 295
LR+L+ +P L +L L L+ N + + AF+ L +
Sbjct: 231 EAAPDAFQGLRSLNSLVLYGNKITELPKGLFEGLFSLQLLLLNANKINCLRVDAFQDLHN 290
Query: 296 LKLVKI 301
L L+ +
Sbjct: 291 LNLLSL 296
Score = 56 (24.8 bits), Expect = 4.8e-07, Sum P(4) = 4.8e-07
Identities = 17/62 (27%), Positives = 30/62 (48%)
Query: 337 GTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFVDNIQLETVIIN 396
G + L L GN + + F+ LFSL+L+ +N ++ + AF D L + +
Sbjct: 239 GLRSLNSLVLYGNKITELPKGLFEGLFSLQLLLLNA-NKINCLRVDAFQDLHNLNLLSLY 297
Query: 397 EN 398
+N
Sbjct: 298 DN 299
Score = 54 (24.1 bits), Expect = 2.2e-09, Sum P(3) = 2.2e-09
Identities = 15/45 (33%), Positives = 21/45 (46%)
Query: 261 IPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIP 305
IP + L +L L L GN+ S + AF L +L + I P
Sbjct: 712 IPARTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANP 756
Score = 54 (24.1 bits), Expect = 5.3e-09, Sum P(4) = 5.3e-09
Identities = 17/57 (29%), Positives = 28/57 (49%)
Query: 390 LETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFPLERISFLDLSDN 446
L+TV+ N LK LP + + T L L GN + + + ++ +DLS+N
Sbjct: 630 LDTVVRCSNKGLKALPKGIPKDVTELY---LDGNQFTLVPKELSNYKHLTLIDLSNN 683
Score = 53 (23.7 bits), Expect = 2.8e-09, Sum P(3) = 2.8e-09
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 261 IPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSL 296
+P K+LS L +DLS N S + + +F ++ L
Sbjct: 665 VP-KELSNYKHLTLIDLSNNRISTLSNQSFSNMTQL 699
Score = 46 (21.3 bits), Expect = 1.1e-17, Sum P(4) = 1.1e-17
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 496 DRIIKNNHSLTIVLNNLKCSSPPDIKG 522
D +NN + +NN C PP+ G
Sbjct: 900 DNDCENNSTCVDGINNYTCLCPPEYTG 926
Score = 41 (19.5 bits), Expect = 0.00047, Sum P(2) = 0.00046
Identities = 22/97 (22%), Positives = 42/97 (43%)
Query: 420 LKGNSLSHLEASHFPLE--RISFLDLSDNPLHCD--C----NXXXXXXXXXXXXKSTM-E 470
L+G++++ ++ F SF+ S + LHC C N + + E
Sbjct: 134 LRGHNVAEVQKREFVCSAGHQSFMAPSCSVLHCPAACTCSNNIVDCRGKGLTEIPTNLPE 193
Query: 471 TTT-VAYEMTSNTSISPGTTTEAQRVDRIIKNNHSLT 506
T T + E S I PG + +++ RI +N+ ++
Sbjct: 194 TITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQIS 230
Score = 39 (18.8 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 34/160 (21%), Positives = 56/160 (35%)
Query: 389 QLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNP 447
QL + ++ N + + F G + + + L N L + F LE + L L N
Sbjct: 455 QLRKINLSNN-KITDIEEGAFDGASGVNELLLTSNRLETVRDKMFKGLESLKTLMLRSNR 513
Query: 448 LHCDCNXXXXXXXXXXXXKS-TMETTTVA---YEM-----TSNTSISPGTTT--EAQRVD 496
+ C N + TTVA ++ T N +P A D
Sbjct: 514 VSCVGNDSFTGLSSVRLLSLYDNQITTVAPGSFDTLHSLSTLNLLANPFNCNCHLAWLGD 573
Query: 497 RIIKNNHSLTIVLNNLKCSSPPDIKGLEVKAVPENSVHCE 536
+ K IV N +C P +K + ++ V C+
Sbjct: 574 WLRKKR----IVTGNPRCQKPYFLKEIPIQDVAIQDFTCD 609
Score = 37 (18.1 bits), Expect = 1.1e-17, Sum P(4) = 1.1e-17
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 270 SALVNLDLSGNNFSNIDSVAFKSLFSLKLVKI 301
S + L L+ N + FK L SLK + +
Sbjct: 478 SGVNELLLTSNRLETVRDKMFKGLESLKTLML 509
Score = 37 (18.1 bits), Expect = 9.1e-17, Sum P(4) = 9.1e-17
Identities = 9/28 (32%), Positives = 10/28 (35%)
Query: 496 DRIIKNNHSLTIVLNNLKCSSPPDIKGL 523
D KN T +N C P GL
Sbjct: 978 DNKCKNGAQCTDAVNGYTCICPEGYSGL 1005
Score = 37 (18.1 bits), Expect = 5.3e-09, Sum P(4) = 5.3e-09
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 337 GTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKI 370
G + L L+ N + FK L SLK + +
Sbjct: 476 GASGVNELLLTSNRLETVRDKMFKGLESLKTLML 509
>ZFIN|ZDB-GENE-061103-397 [details] [associations]
symbol:zgc:153913 "zgc:153913" species:7955 "Danio
rerio" [GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR001611
PROSITE:PS51450 ZFIN:ZDB-GENE-061103-397 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR000372 SMART:SM00013 KO:K13023
GeneTree:ENSGT00700000104286 EMBL:CABZ01111922 EMBL:BC125910
IPI:IPI00613175 RefSeq:NP_001073448.1 UniGene:Dr.152360
Ensembl:ENSDART00000092924 GeneID:559700 KEGG:dre:559700
HOGENOM:HOG000205740 InParanoid:A0JMK3 OMA:CKVDKCS
OrthoDB:EOG4P8FJC NextBio:20883092 Uniprot:A0JMK3
Length = 496
Score = 231 (86.4 bits), Expect = 1.3e-17, Sum P(2) = 1.3e-17
Identities = 72/239 (30%), Positives = 110/239 (46%)
Query: 74 IELRSLDLSVNKINV-LGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYN 132
+ELR L++S N + L F L L ++ N++S + F L +L+ L L N
Sbjct: 97 VELRELEISGNICWMSLDIQTFSSLTNLTRLLLNNNKLSGVDAGLFHSLHQLEMLQLRGN 156
Query: 133 KISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLS 192
+S ++ F+ L+ L LSFN I+ +E+F + LR+L L N+I ++P+ + +
Sbjct: 157 GLSFLSGRLFQRLHRLQELDLSFNQISSLS-TELFQNNSELRVLSLQANKIPNLPDGIFT 215
Query: 193 NLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXX 252
+L H L L L NLI + SFP +L TL L TL +
Sbjct: 216 HLDH--LQELNLRSNLIRVLTPGSFP---ASLKTLILKKNLLEKLTNAVFHTLHYITYLD 270
Query: 253 XXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSID 311
+P L +L LDLS N S + FK LFS+K V + +L S+D
Sbjct: 271 LSQNSLTEVPADLFQNLISLETLDLSENRISTLAGSVFKGLFSIKSVYLQK-NSLISVD 328
Score = 180 (68.4 bits), Expect = 7.9e-12, Sum P(2) = 7.9e-12
Identities = 68/239 (28%), Positives = 107/239 (44%)
Query: 56 IILRENRISNVHYTLSFYI-ELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALS 114
++L N++S V L + +L L L N ++ L F+ ++L L++S+N+IS+LS
Sbjct: 127 LLLNNNKLSGVDAGLFHSLHQLEMLQLRGNGLSFLSGRLFQRLHRLQELDLSFNQISSLS 186
Query: 115 KDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLR 174
+ F+ EL+ L L NKI + F HL+ L L N I +SLK+L
Sbjct: 187 TELFQNNSELRVLSLQANKIPNLPDGIFTHLDHLQELNLRSNLIRVLTPGSFPASLKTL- 245
Query: 175 ILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXX 234
ILK N + + N V L + + YL L++N + V + F L +L TL L
Sbjct: 246 ILK--KNLLEKLTNAVFHTLHY--ITYLDLSQNSLTEVPADLFQ-NLISLETLDLSENRI 300
Query: 235 XXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSL 293
L ++ ++ L L LDLS N+ +I S F+ L
Sbjct: 301 STLAGSVFKGLFSIKSVYLQKNSLISVDAHLLKDQHDLQLLDLSNNSLRSIPSGFFEDL 359
Score = 149 (57.5 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 52/189 (27%), Positives = 91/189 (48%)
Query: 31 QKLEASCTD-AGLEVVPIQLNPEVQTIILRENRISNVHYTLSFYIE-LRSLDLSVNKINV 88
Q+L+ S + L Q N E++ + L+ N+I N+ + +++ L+ L+L N I V
Sbjct: 173 QELDLSFNQISSLSTELFQNNSELRVLSLQANKIPNLPDGIFTHLDHLQELNLRSNLIRV 232
Query: 89 LGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHL 148
L +F K L L N + L+ F L + LDLS N ++ + F++ + L
Sbjct: 233 LTPGSFPASLKTLILK--KNLLEKLTNAVFHTLHYITYLDLSQNSLTEVPADLFQNLISL 290
Query: 149 ELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENL 208
E L LS N I+ S +F L S++ + L N ++ V ++L + L L L+ N
Sbjct: 291 ETLDLSENRISTLAGS-VFKGLFSIKSVYLQKNSLISVDAHLLKD--QHDLQLLDLSNNS 347
Query: 209 IETVLDNSF 217
+ ++ F
Sbjct: 348 LRSIPSGFF 356
Score = 149 (57.5 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 64/236 (27%), Positives = 105/236 (44%)
Query: 69 TLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLD 128
T S L L L+ NK++ + + F ++L L + N +S LS F+ L L+ LD
Sbjct: 117 TFSSLTNLTRLLLNNNKLSGVDAGLFHSLHQLEMLQLRGNGLSFLSGRLFQRLHRLQELD 176
Query: 129 LSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPN 188
LS+N+IS ++ F++ L +L L N I D IF+ L L+ L L +N I
Sbjct: 177 LSFNQISSLSTELFQNNSELRVLSLQANKIPNLPDG-IFTHLDHLQELNLRSNLI----- 230
Query: 189 NVLS--NLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLR 246
VL+ + P SL L L +NL+E L N+ TL + L L L
Sbjct: 231 RVLTPGSFP-ASLKTLILKKNLLEK-LTNAVFHTLHYITYLDLSQNSLTEVPADLFQNLI 288
Query: 247 TLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
+L + L ++ ++ L N+ ++D+ K L+L+ ++
Sbjct: 289 SLETLDLSENRISTLAGSVFKGLFSIKSVYLQKNSLISVDAHLLKDQHDLQLLDLS 344
Score = 144 (55.7 bits), Expect = 7.7e-08, Sum P(2) = 7.7e-08
Identities = 75/320 (23%), Positives = 124/320 (38%)
Query: 110 ISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFE-DSEIFS 168
I L + +F L L + ++ AF + L L +S NI + D + FS
Sbjct: 61 IPDLDQQSFPETLRLSKLVFLNGMLKSVSGEAFERLVELRELEIS-GNICWMSLDIQTFS 119
Query: 169 SLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLA 228
SL +L L L+NN++ V + +L HQ L L L N + + F L L L
Sbjct: 120 SLTNLTRLLLNNNKLSGVDAGLFHSL-HQ-LEMLQLRGNGLSFLSGRLFQ-RLHRLQELD 176
Query: 229 LXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSV 288
L L +P + L L L+L N +
Sbjct: 177 LSFNQISSLSTELFQNNSELRVLSLQANKIPNLPDGIFTHLDHLQELNLRSNLIRVLTPG 236
Query: 289 AFKSLFSLKLVKINLIPNL-DSIDQXXXXXXXXXXXXXXXXXAFSLTPLGTLKCDRLDLS 347
+F + ++K NL+ L +++ + + + LDLS
Sbjct: 237 SFPASLKTLILKKNLLEKLTNAVFHTLHYITYLDLSQNSLTEVPADLFQNLISLETLDLS 296
Query: 348 GNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFVDNIQLETVIINENMNLKQLPSK 407
N S + FK LFS+K V + +L S+D D L+ + ++ N +L+ +PS
Sbjct: 297 ENRISTLAGSVFKGLFSIKSVYLQK-NSLISVDAHLLKDQHDLQLLDLSNN-SLRSIPSG 354
Query: 408 LFQGNTNLKSV-SLKGNSLS 426
F+ + + + V L+GN S
Sbjct: 355 FFE-DLDFQCVFELRGNPWS 373
Score = 143 (55.4 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 79/338 (23%), Positives = 134/338 (39%)
Query: 123 ELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNN- 181
+++ L + + I +++ +F +TL L L+ N + E F L LR L++ N
Sbjct: 50 QVRELIVVASGIPDLDQQSFPETLRLSKLVF-LNGMLKSVSGEAFERLVELRELEISGNI 108
Query: 182 --QILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXX 239
LD+ S+L + L L LN N + V D +L L L L
Sbjct: 109 CWMSLDI--QTFSSLTN--LTRLLLNNNKLSGV-DAGLFHSLHQLEMLQLRGNGLSFLSG 163
Query: 240 XXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLV 299
L L ++ T+ S L L L N N+ F L L+
Sbjct: 164 RLFQRLHRLQELDLSFNQISSLSTELFQNNSELRVLSLQANKIPNLPDGIFTHLDHLQ-- 221
Query: 300 KINLIPNLDSIDQXXXXXXXXXXXXXXXXXAFSLTP--LGTLK-CDRLDLSGNNFSNIDS 356
++NL NL + LT TL LDLS N+ + + +
Sbjct: 222 ELNLRSNLIRVLTPGSFPASLKTLILKKNLLEKLTNAVFHTLHYITYLDLSQNSLTEVPA 281
Query: 357 VAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNL 415
F++L SL+ ++L N + ++ F +++V + +N +L + + L + +L
Sbjct: 282 DLFQNLISLET--LDLSENRISTLAGSVFKGLFSIKSVYLQKN-SLISVDAHLLKDQHDL 338
Query: 416 KSVSLKGNSLSHLEASHFP-LERISFLDLSDNPLHCDC 452
+ + L NSL + + F L+ +L NP CDC
Sbjct: 339 QLLDLSNNSLRSIPSGFFEDLDFQCVFELRGNPWSCDC 376
Score = 56 (24.8 bits), Expect = 1.3e-17, Sum P(2) = 1.3e-17
Identities = 11/41 (26%), Positives = 21/41 (51%)
Query: 499 IKNNHSLTIVLNNLKCSSPPDIKGLEVKAVPENSVHCESNT 539
+K NH L+ + C +P I+G +++V + C N+
Sbjct: 385 LKYNHKHVKDLSRVSCEAPELIQGHNLRSVDREQLVCSRNS 425
Score = 38 (18.4 bits), Expect = 9.4e-16, Sum P(2) = 9.4e-16
Identities = 9/38 (23%), Positives = 18/38 (47%)
Query: 498 IIKNNHSLTIVLNNLKCSSPPDIKGLEVKAVPENSVHC 535
+I+ ++ ++ L CS E+ +V E S+ C
Sbjct: 405 LIQGHNLRSVDREQLVCSRNSSSNSPEMISVDEGSIQC 442
>RGD|2336 [details] [associations]
symbol:Chad "chondroadherin" species:10116 "Rattus norvegicus"
[GO:0001502 "cartilage condensation" evidence=IEP] [GO:0005578
"proteinaceous extracellular matrix" evidence=TAS] InterPro:IPR001611
PROSITE:PS51450 RGD:2336 GO:GO:0005578 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0001502 CTD:1101
HOGENOM:HOG000013150 HOVERGEN:HBG005324 KO:K06248 OrthoDB:EOG4K9BCM
OMA:CHCHGGD EMBL:AF004953 IPI:IPI00196534 RefSeq:NP_062037.1
UniGene:Rn.9899 ProteinModelPortal:O70210 STRING:O70210
Ensembl:ENSRNOT00000004435 GeneID:29195 KEGG:rno:29195 UCSC:RGD:2336
GeneTree:ENSGT00700000104056 InParanoid:O70210 NextBio:608331
Genevestigator:O70210 GermOnline:ENSRNOG00000003304 Uniprot:O70210
Length = 358
Score = 177 (67.4 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 62/239 (25%), Positives = 101/239 (42%)
Query: 79 LDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVIN 138
L+L N VL +++F L++L++ + I ++ F+GLK+L L LS+N I V+
Sbjct: 55 LNLQRNNFPVLAANSFRTVPNLVSLHLQHCNIREVAAGAFRGLKQLIYLYLSHNDIRVLR 114
Query: 139 KTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQS 198
AF D L L L N ++ + S L +L IL+L+NN+I ++ +
Sbjct: 115 AGAFDDLTELTYLYLDHNKVSELPRG-LLSPLVNLFILQLNNNKIRELRAGAFQGA--KD 171
Query: 199 LHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXX 258
L +LYL+EN + ++ S + NL L LR +
Sbjct: 172 LRWLYLSENALTSLHPGSLD-DVENLAKFHLDRNQLSSYPSAALSKLRVVEELKLSHNPL 230
Query: 259 XAIPTKQLSKLSA-LVNLDLSGNNFSNIDSVAFKSLFSLKLV-----KINLIPNLDSID 311
+IP L L L N AF + +LK V ++N +P+ D
Sbjct: 231 KSIPDNAFQSFGRYLETLWLDNTNLEKFSDAAFAGVTTLKHVHLENNRLNQLPSTFPFD 289
Score = 157 (60.3 bits), Expect = 1.3e-17, Sum P(2) = 1.3e-17
Identities = 56/209 (26%), Positives = 93/209 (44%)
Query: 5 LTCIFLILALTKLNKAICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRIS 64
L+ +FL + L L A CP C C C GL+ +P +++ + + L+ N
Sbjct: 7 LSLVFLAILLPAL--AACPQNCHCHGDLQHVICDKVGLQKIP-KVSETTKLLNLQRNNFP 63
Query: 65 NVHYTLSFYI--ELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLK 122
V SF L SL L I + + F +L+ L +S+N+I L F L
Sbjct: 64 -VLAANSFRTVPNLVSLHLQHCNIREVAAGAFRGLKQLIYLYLSHNDIRVLRAGAFDDLT 122
Query: 123 ELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQ 182
EL L L +NK+S + + ++L +L L+ N I + F K LR L L N
Sbjct: 123 ELTYLYLDHNKVSELPRGLLSPLVNLFILQLNNNKIRELR-AGAFQGAKDLRWLYLSENA 181
Query: 183 ILDVPNNVLSNLPHQSLHYLYLNENLIET 211
+ + L ++ ++L +L+ N + +
Sbjct: 182 LTSLHPGSLDDV--ENLAKFHLDRNQLSS 208
Score = 144 (55.7 bits), Expect = 6.8e-07, P = 6.8e-07
Identities = 48/155 (30%), Positives = 75/155 (48%)
Query: 75 ELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKI 134
+L L LS N I VL + F+ +L L + +N++S L + L L L L+ NKI
Sbjct: 99 QLIYLYLSHNDIRVLRAGAFDDLTELTYLYLDHNKVSELPRGLLSPLVNLFILQLNNNKI 158
Query: 135 SVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNL 194
+ AF+ L L LS N +T + +++L LD NQ+ P+ LS L
Sbjct: 159 RELRAGAFQGAKDLRWLYLSENALTSLHPGSL-DDVENLAKFHLDRNQLSSYPSAALSKL 217
Query: 195 PHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLAL 229
+ + L L+ N ++++ DN+F L TL L
Sbjct: 218 --RVVEELKLSHNPLKSIPDNAFQSFGRYLETLWL 250
Score = 131 (51.2 bits), Expect = 1.3e-17, Sum P(2) = 1.3e-17
Identities = 37/111 (33%), Positives = 57/111 (51%)
Query: 343 RLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFVD-NIQLETVIINENMNL 401
+ L N S+ S A L ++ +K++ P L SI AF LET+ + +N NL
Sbjct: 198 KFHLDRNQLSSYPSAALSKLRVVEELKLSHNP-LKSIPDNAFQSFGRYLETLWL-DNTNL 255
Query: 402 KQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFPLERISFLDLSDNPLHCDC 452
++ F G T LK V L+ N L+ L ++ FP + + L L++NP C C
Sbjct: 256 EKFSDAAFAGVTTLKHVHLENNRLNQLPST-FPFDNLETLTLTNNPWKCTC 305
Score = 120 (47.3 bits), Expect = 0.00032, P = 0.00032
Identities = 48/179 (26%), Positives = 81/179 (45%)
Query: 52 EVQTIILRENRISNV-HYTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEI 110
E+ + L N++S + LS + L L L+ NKI L + F+ L L +S N +
Sbjct: 123 ELTYLYLDHNKVSELPRGLLSPLVNLFILQLNNNKIRELRAGAFQGAKDLRWLYLSENAL 182
Query: 111 SALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSL 170
++L + ++ L L N++S A +E L LS N + D+ S
Sbjct: 183 TSLHPGSLDDVENLAKFHLDRNQLSSYPSAALSKLRVVEELKLSHNPLKSIPDNAFQSFG 242
Query: 171 KSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLAL 229
+ L L LDN + + + + +L +++L N + L ++FPF NL TL L
Sbjct: 243 RYLETLWLDNTNLEKFSDAAFAGVT--TLKHVHLENNRLNQ-LPSTFPFD--NLETLTL 296
>UNIPROTKB|F1RR92 [details] [associations]
symbol:SLIT3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070100 "negative regulation of chemokine-mediated
signaling pathway" evidence=IEA] [GO:0061364 "apoptotic process
involved in luteolysis" evidence=IEA] [GO:0051414 "response to
cortisol stimulus" evidence=IEA] [GO:0050919 "negative chemotaxis"
evidence=IEA] [GO:0048846 "axon extension involved in axon
guidance" evidence=IEA] [GO:0048495 "Roundabout binding"
evidence=IEA] [GO:0035385 "Roundabout signaling pathway"
evidence=IEA] [GO:0032870 "cellular response to hormone stimulus"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0010629 "negative regulation of gene expression"
evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0008285
GO:GO:0005615 GO:GO:0030308 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887 PROSITE:PS01186
GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 GO:GO:0048846 GO:GO:0070100 Pfam:PF12661
Pfam:PF01463 GO:GO:0051414 GeneTree:ENSGT00700000104083
GO:GO:0050919 GO:GO:0035385 GO:GO:0061364 OMA:SVDCHGL EMBL:CU640426
Ensembl:ENSSSCT00000018524 Uniprot:F1RR92
Length = 1340
Score = 181 (68.8 bits), Expect = 2.8e-17, Sum P(3) = 2.8e-17
Identities = 48/165 (29%), Positives = 84/165 (50%)
Query: 18 NKAICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHY-TLSFYIEL 76
N CPS C C + ++ C GL +P L + I L +N I ++ + Y +L
Sbjct: 90 NSISCPSACTCSNNIVD--CRGKGLTEIPANLPEGIVEIRLEQNSIKSIPAGAFTQYKKL 147
Query: 77 RSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISV 136
+ +D+S N+I+ + + F+ L +L + N+I+ + K F GL L+ L L+ NKI+
Sbjct: 148 KRIDISKNQISDIAADAFQGLKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLNANKINC 207
Query: 137 INKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNN 181
+ F+D +L LL L N + +F+ L++++ L L N
Sbjct: 208 LRVNTFQDLQNLNLLSLYDNKLQTISKG-LFAPLQAIQTLHLAQN 251
Score = 180 (68.4 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 42/135 (31%), Positives = 68/135 (50%)
Query: 22 CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSFYIELRSLDL 81
CP +C C + + C++ GL +P + +V + L N ++ V LS + L +DL
Sbjct: 542 CPEQCTCVETVVR--CSNRGLRALPRGIPKDVTELYLEGNHLTAVPRELSIFRHLTLIDL 599
Query: 82 SVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTA 141
S N I +L ++ F + L L +SYN + + +F GL+ L+ L L N IS + + +
Sbjct: 600 SNNSIGMLTNYTFSNMSHLSTLILSYNRLRCIPIHSFNGLRSLRVLTLHGNDISSVPEGS 659
Query: 142 FRDTLHLELLILSFN 156
F D L L L N
Sbjct: 660 FNDLTSLSHLALGTN 674
Score = 160 (61.4 bits), Expect = 5.6e-15, Sum P(3) = 5.6e-15
Identities = 44/134 (32%), Positives = 74/134 (55%)
Query: 74 IELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNK 133
+E+R L N I + + F KL ++IS N+IS ++ D F+GLK L +L L NK
Sbjct: 124 VEIR---LEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAADAFQGLKSLTSLVLYGNK 180
Query: 134 ISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSN 193
I+ I K F + L+LL+L+ N I + F L++L +L L +N++ + + +
Sbjct: 181 ITEIPKGLFDGLVSLQLLLLNANKINCLRVNT-FQDLQNLNLLSLYDNKLQTISKGLFA- 238
Query: 194 LPHQSLHYLYLNEN 207
P Q++ L+L +N
Sbjct: 239 -PLQAIQTLHLAQN 251
Score = 152 (58.6 bits), Expect = 4.1e-14, Sum P(3) = 4.1e-14
Identities = 49/163 (30%), Positives = 77/163 (47%)
Query: 21 ICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSF--YIELRS 78
+CP +C+C + C++ L VP L V + L +N IS + T F LR
Sbjct: 320 LCPDKCRC--EGTIVDCSNQKLARVPSHLPEYVTDLRLNDNEISVLEATGVFKKLPNLRK 377
Query: 79 LDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVIN 138
++LS NKI + F+ + L ++ N++ + F+GL LKTL L N IS ++
Sbjct: 378 INLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRMFRGLSGLKTLMLRSNLISCVS 437
Query: 139 KTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNN 181
F + LL L N I+ F++L SL + L +N
Sbjct: 438 NDTFVGLSSVRLLSLYDNRISTITPGA-FTTLVSLSTINLLSN 479
Score = 122 (48.0 bits), Expect = 2.8e-17, Sum P(3) = 2.8e-17
Identities = 40/122 (32%), Positives = 61/122 (50%)
Query: 335 PLGTLK-CDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLET 392
P G K L L GN+ + + S+F L I+L N + + F + L T
Sbjct: 564 PRGIPKDVTELYLEGNHLTAVPREL--SIFR-HLTLIDLSNNSIGMLTNYTFSNMSHLST 620
Query: 393 VIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHL-EASHFPLERISFLDLSDNPLHCD 451
+I++ N L+ +P F G +L+ ++L GN +S + E S L +S L L NPLHCD
Sbjct: 621 LILSYN-RLRCIPIHSFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGTNPLHCD 679
Query: 452 CN 453
C+
Sbjct: 680 CS 681
Score = 97 (39.2 bits), Expect = 1.0e-14, Sum P(3) = 1.0e-14
Identities = 28/113 (24%), Positives = 60/113 (53%)
Query: 343 RLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNL 401
+++LS N + AF S++ ++ L N L+++ R F L+T+++ N+ +
Sbjct: 377 KINLSNNKIKEVREGAFDGAASVQ--ELMLTGNQLETVHGRMFRGLSGLKTLMLRSNL-I 433
Query: 402 KQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPLHCDCN 453
+ + F G ++++ +SL N +S + F L +S ++L NP +C+C+
Sbjct: 434 SCVSNDTFVGLSSVRLLSLYDNRISTITPGAFTTLVSLSTINLLSNPFNCNCH 486
Score = 91 (37.1 bits), Expect = 2.3e-07, Sum P(4) = 2.3e-07
Identities = 35/133 (26%), Positives = 53/133 (39%)
Query: 151 LILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIE 210
L L+ N I+ E + +F L +LR + L NN+I +V S+ L L N +E
Sbjct: 353 LRLNDNEISVLEATGVFKKLPNLRKINLSNNKIKEVREGAFDGAA--SVQELMLTGNQLE 410
Query: 211 TVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLS 270
TV F L+ L TL L V L ++ I + L
Sbjct: 411 TVHGRMFR-GLSGLKTLMLRSNLISCVSNDTFVGLSSVRLLSLYDNRISTITPGAFTTLV 469
Query: 271 ALVNLDLSGNNFS 283
+L ++L N F+
Sbjct: 470 SLSTINLLSNPFN 482
Score = 59 (25.8 bits), Expect = 7.3e-11, Sum P(3) = 7.3e-11
Identities = 27/110 (24%), Positives = 46/110 (41%)
Query: 171 KSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALX 230
K + L L+ N + VP LS H +L + L+ N I + + +F +++L TL L
Sbjct: 569 KDVTELYLEGNHLTAVPRE-LSIFRHLTL--IDLSNNSIGMLTNYTFS-NMSHLSTLILS 624
Query: 231 XXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGN 280
LR+L ++P + L++L +L L N
Sbjct: 625 YNRLRCIPIHSFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGTN 674
Score = 56 (24.8 bits), Expect = 1.5e-10, Sum P(3) = 1.5e-10
Identities = 17/59 (28%), Positives = 30/59 (50%)
Query: 390 LETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFPLERISFLDLSDNPL 448
+ETV+ N L+ LP + + T L L+GN L+ + ++ +DLS+N +
Sbjct: 549 VETVVRCSNRGLRALPRGIPKDVTELY---LEGNHLTAVPRELSIFRHLTLIDLSNNSI 604
Score = 52 (23.4 bits), Expect = 3.7e-10, Sum P(3) = 3.7e-10
Identities = 14/45 (31%), Positives = 22/45 (48%)
Query: 261 IPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIP 305
IP + L +L L L GN+ S++ +F L SL + + P
Sbjct: 631 IPIHSFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGTNP 675
Score = 51 (23.0 bits), Expect = 3.6e-10, Sum P(2) = 3.6e-10
Identities = 33/154 (21%), Positives = 55/154 (35%)
Query: 395 IN-ENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPLHCDC 452
IN N +K++ F G +++ + L GN L + F L + L L N + C
Sbjct: 378 INLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRMFRGLSGLKTLMLRSNLISCVS 437
Query: 453 NXXXXXXXXXXXXK------STMET---TTVAYEMTSNTSISP-GTTTEAQRVDRIIKNN 502
N ST+ TT+ T N +P + + ++
Sbjct: 438 NDTFVGLSSVRLLSLYDNRISTITPGAFTTLVSLSTINLLSNPFNCNCHLAWLGKWLRKR 497
Query: 503 HSLTIVLNNLKCSSPPDIKGLEVKAVPENSVHCE 536
IV N +C P +K + ++ V CE
Sbjct: 498 R---IVSGNPRCQKPFFLKEIPIQDVAIQDFTCE 528
Score = 50 (22.7 bits), Expect = 5.9e-10, Sum P(3) = 5.9e-10
Identities = 19/89 (21%), Positives = 36/89 (40%)
Query: 337 GTLKCDRLDLSGNNFSNIDSVAFKSLFSLK--LVKINLIPNLDSIDQRAFVDNIQLETVI 394
G L L+GN + F+ L LK +++ NLI + FV + +
Sbjct: 395 GAASVQELMLTGNQLETVHGRMFRGLSGLKTLMLRSNLI---SCVSNDTFVGLSSVRLLS 451
Query: 395 INENMNLKQLPSKLFQGNTNLKSVSLKGN 423
+ +N + + F +L +++L N
Sbjct: 452 LYDN-RISTITPGAFTTLVSLSTINLLSN 479
Score = 44 (20.5 bits), Expect = 2.4e-09, Sum P(3) = 2.4e-09
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 260 AIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSL 296
A+P ++LS L +DLS N+ + + F ++ L
Sbjct: 583 AVP-RELSIFRHLTLIDLSNNSIGMLTNYTFSNMSHL 618
Score = 43 (20.2 bits), Expect = 2.8e-17, Sum P(3) = 2.8e-17
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 496 DRIIKNNHSLTIVLNNLKCSSPPDIKG 522
D +NN + +NN C PP+ G
Sbjct: 819 DNDCENNATCVDGINNYVCVCPPNYTG 845
Score = 40 (19.1 bits), Expect = 4.8e-09, Sum P(2) = 4.8e-09
Identities = 7/32 (21%), Positives = 12/32 (37%)
Query: 507 IVLNNLKCSSPPDIKGLEVKAVPENSVHCESN 538
I + +CSSP + + + C N
Sbjct: 271 IETSGARCSSPRRLANKRISQIKSKKFRCSGN 302
Score = 37 (18.1 bits), Expect = 2.3e-07, Sum P(4) = 2.3e-07
Identities = 8/30 (26%), Positives = 17/30 (56%)
Query: 105 ISYNEISALSKDTFKGLKELKTLDLSYNKI 134
++ N IS + +F + +++TL L N +
Sbjct: 2 LNNNNISRILVTSFNHMPKIRTLRLHSNHL 31
>UNIPROTKB|F1S5C4 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090288 "negative regulation of cellular response to
growth factor stimulus" evidence=IEA] [GO:0090260 "negative
regulation of retinal ganglion cell axon guidance" evidence=IEA]
[GO:0090024 "negative regulation of neutrophil chemotaxis"
evidence=IEA] [GO:0071676 "negative regulation of mononuclear cell
migration" evidence=IEA] [GO:0071672 "negative regulation of smooth
muscle cell chemotaxis" evidence=IEA] [GO:0071504 "cellular
response to heparin" evidence=IEA] [GO:0070100 "negative regulation
of chemokine-mediated signaling pathway" evidence=IEA] [GO:0061364
"apoptotic process involved in luteolysis" evidence=IEA]
[GO:0060763 "mammary duct terminal end bud growth" evidence=IEA]
[GO:0051414 "response to cortisol stimulus" evidence=IEA]
[GO:0051058 "negative regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0050929 "induction of negative
chemotaxis" evidence=IEA] [GO:0048846 "axon extension involved in
axon guidance" evidence=IEA] [GO:0048754 "branching morphogenesis
of an epithelial tube" evidence=IEA] [GO:0048495 "Roundabout
binding" evidence=IEA] [GO:0045499 "chemorepellent activity"
evidence=IEA] [GO:0043394 "proteoglycan binding" evidence=IEA]
[GO:0043237 "laminin-1 binding" evidence=IEA] [GO:0043116 "negative
regulation of vascular permeability" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0033563 "dorsal/ventral axon guidance" evidence=IEA]
[GO:0032870 "cellular response to hormone stimulus" evidence=IEA]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IEA]
[GO:0030837 "negative regulation of actin filament polymerization"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0021972 "corticospinal neuron axon guidance
through spinal cord" evidence=IEA] [GO:0021836 "chemorepulsion
involved in postnatal olfactory bulb interneuron migration"
evidence=IEA] [GO:0016337 "cell-cell adhesion" evidence=IEA]
[GO:0010629 "negative regulation of gene expression" evidence=IEA]
[GO:0010596 "negative regulation of endothelial cell migration"
evidence=IEA] [GO:0010593 "negative regulation of lamellipodium
assembly" evidence=IEA] [GO:0009986 "cell surface" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0008201 "heparin binding" evidence=IEA]
[GO:0008045 "motor neuron axon guidance" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005615 "extracellular space"
evidence=IEA] [GO:0005095 "GTPase inhibitor activity" evidence=IEA]
[GO:0002042 "cell migration involved in sprouting angiogenesis"
evidence=IEA] [GO:0001933 "negative regulation of protein
phosphorylation" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001657 "ureteric bud development"
evidence=IEA] [GO:0001656 "metanephros development" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005737 GO:GO:0008285 GO:GO:0005615 GO:GO:0009986
GO:GO:0030308 GO:GO:0001701 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0008201 GO:GO:0005509
GO:GO:0043116 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0043065 GO:GO:0008045 GO:GO:0071504
GO:GO:0005095 GO:GO:0016337 PROSITE:PS01186 GO:GO:0032870
GO:GO:0030837 GO:GO:0010629 InterPro:IPR003645 InterPro:IPR001791
Pfam:PF00054 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 GO:GO:0071672 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0001656 GO:GO:0010596 GO:GO:0001657
GO:GO:0001933 GO:GO:0048754 GO:GO:0071676 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
GO:GO:0048846 GO:GO:0060763 GO:GO:0070100 GO:GO:0090288
GO:GO:0033563 GO:GO:0045499 GO:GO:0002042 Pfam:PF01463
GO:GO:0010593 GO:GO:0051414 GeneTree:ENSGT00700000104083
GO:GO:0090260 GO:GO:0021836 GO:GO:0061364 GO:GO:0021972
GO:GO:0050929 GO:GO:0090024 GO:GO:0051058 EMBL:CU929485
Ensembl:ENSSSCT00000009572 OMA:XVETIND Uniprot:F1S5C4
Length = 1045
Score = 204 (76.9 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 49/135 (36%), Positives = 72/135 (53%)
Query: 22 CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSFYIELRSLDL 81
CP+ C C D + C++ L+V+P + +V + L N+ + V LS Y L +DL
Sbjct: 240 CPTECTCLDTVVR--CSNKALKVLPKGIPRDVTELYLDGNQFTLVPKELSNYKHLTLIDL 297
Query: 82 SVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTA 141
S N+I+ L + +F +LL L +SYN + L TF GLK L+ L L N ISV+ + A
Sbjct: 298 SNNRISTLSNQSFSNMTQLLTLILSYNRLRCLPPRTFDGLKSLRLLSLHGNDISVVPEGA 357
Query: 142 FRDTLHLELLILSFN 156
F D L L + N
Sbjct: 358 FNDLSALSHLAIGAN 372
Score = 153 (58.9 bits), Expect = 6.0e-17, Sum P(3) = 6.0e-17
Identities = 45/159 (28%), Positives = 73/159 (45%)
Query: 22 CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSF--YIELRSL 79
CP +C+C + C++ L +P + + L N + + T F +LR +
Sbjct: 19 CPEKCRC--EGTTVDCSNQKLSKIPDHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKI 76
Query: 80 DLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINK 139
+ S NKI + FE + + + ++ N + + FKGL+ LKTLD+ N+IS +
Sbjct: 77 NFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQYKMFKGLESLKTLDVRSNRISCVGN 136
Query: 140 TAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKL 178
+F + LL L N IT F +L SL L L
Sbjct: 137 DSFIGLSSVRLLSLYDNQITTIAPGA-FDTLHSLSTLNL 174
Score = 142 (55.0 bits), Expect = 6.0e-17, Sum P(3) = 6.0e-17
Identities = 43/128 (33%), Positives = 68/128 (53%)
Query: 330 AFSLTPLGTLK-CDRLDLSGNNFSNIDSVAFKSLFSLK-LVKINLIPN-LDSIDQRAFVD 386
A + P G + L L GN F+ + K L + K L I+L N + ++ ++F +
Sbjct: 257 ALKVLPKGIPRDVTELYLDGNQFTLVP----KELSNYKHLTLIDLSNNRISTLSNQSFSN 312
Query: 387 NIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHF-PLERISFLDLSD 445
QL T+I++ N L+ LP + F G +L+ +SL GN +S + F L +S L +
Sbjct: 313 MTQLLTLILSYN-RLRCLPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGA 371
Query: 446 NPLHCDCN 453
NPL+CDCN
Sbjct: 372 NPLYCDCN 379
Score = 125 (49.1 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 34/105 (32%), Positives = 53/105 (50%)
Query: 103 LNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFE 162
L + N+ + + K+ K L +DLS N+IS ++ +F + L LILS+N +
Sbjct: 272 LYLDGNQFTLVPKE-LSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCLP 330
Query: 163 DSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNEN 207
F LKSLR+L L N I VP ++L +L +L + N
Sbjct: 331 P-RTFDGLKSLRLLSLHGNDISVVPEGAFNDL--SALSHLAIGAN 372
Score = 98 (39.6 bits), Expect = 2.8e-11, Sum P(3) = 2.8e-11
Identities = 32/111 (28%), Positives = 54/111 (48%)
Query: 51 PEVQTIILRENRISNVHY-TLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNE 109
P+++ I N+I+++ + + L+ N++ + F+ L L++ N
Sbjct: 71 PQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQYKMFKGLESLKTLDVRSNR 130
Query: 110 ISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLH----LELLILSFN 156
IS + D+F GL ++ L L N+I+ I AF DTLH L LL FN
Sbjct: 131 ISCVGNDSFIGLSSVRLLSLYDNQITTIAPGAF-DTLHSLSTLNLLANPFN 180
Score = 88 (36.0 bits), Expect = 2.9e-10, Sum P(3) = 2.9e-10
Identities = 38/158 (24%), Positives = 58/158 (36%)
Query: 126 TLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILD 185
T+D S K+S I + T L L + N T E + IF L LR + NN+I D
Sbjct: 29 TVDCSNQKLSKIPDHIPQYTAELRL---NNNEFTVLEATGIFKKLPQLRKINFSNNKITD 85
Query: 186 VPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTL 245
+ ++ + L N +E V F L +L TL + + L
Sbjct: 86 IEEGAFEGA--SGVNEILLTSNRLENVQYKMFK-GLESLKTLDVRSNRISCVGNDSFIGL 142
Query: 246 RTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFS 283
++ I L +L L+L N F+
Sbjct: 143 SSVRLLSLYDNQITTIAPGAFDTLHSLSTLNLLANPFN 180
Score = 84 (34.6 bits), Expect = 4.8e-11, Sum P(3) = 4.8e-11
Identities = 32/105 (30%), Positives = 44/105 (41%)
Query: 176 LKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXX 235
L LD NQ VP LSN H +L + L+ N I T+ + SF +T L TL L
Sbjct: 272 LYLDGNQFTLVPKE-LSNYKHLTL--IDLSNNRISTLSNQSFS-NMTQLLTLILSYNRLR 327
Query: 236 XXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGN 280
L++L +P + LSAL +L + N
Sbjct: 328 CLPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGAN 372
Score = 53 (23.7 bits), Expect = 6.3e-08, Sum P(3) = 6.3e-08
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 261 IPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSL 296
+P K+LS L +DLS N S + + +F ++ L
Sbjct: 282 VP-KELSNYKHLTLIDLSNNRISTLSNQSFSNMTQL 316
Score = 51 (23.0 bits), Expect = 1.0e-07, Sum P(3) = 1.0e-07
Identities = 14/45 (31%), Positives = 21/45 (46%)
Query: 261 IPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIP 305
+P + L +L L L GN+ S + AF L +L + I P
Sbjct: 329 LPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANP 373
Score = 51 (23.0 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 27/122 (22%), Positives = 44/122 (36%)
Query: 184 LDVPNNVLSNLPHQSLHY---LYLNENLIETVLDNSFPFT-LTNLHTLALXXXXXXXXXX 239
+D N LS +P Y L LN N TVL+ + F L L +
Sbjct: 30 VDCSNQKLSKIPDHIPQYTAELRLNNNEF-TVLEATGIFKKLPQLRKINFSNNKITDIEE 88
Query: 240 XXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLV 299
++ + K L +L LD+ N S + + +F L S++L+
Sbjct: 89 GAFEGASGVNEILLTSNRLENVQYKMFKGLESLKTLDVRSNRISCVGNDSFIGLSSVRLL 148
Query: 300 KI 301
+
Sbjct: 149 SL 150
Score = 46 (21.3 bits), Expect = 6.0e-17, Sum P(3) = 6.0e-17
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 496 DRIIKNNHSLTIVLNNLKCSSPPDIKG 522
D +NN + +NN C PP+ G
Sbjct: 517 DNDCENNSTCVDGINNYTCLCPPEYTG 543
Score = 46 (21.3 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
Identities = 30/150 (20%), Positives = 62/150 (41%)
Query: 390 LETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFPLERISFLDLSDNPLH 449
L+TV+ N LK LP + + T L L GN + + + ++ +DLS+N +
Sbjct: 247 LDTVVRCSNKALKVLPKGIPRDVTELY---LDGNQFTLVPKELSNYKHLTLIDLSNNRIS 303
Query: 450 CDCNXXXXXXXXXXXXKSTMETTTVAYEMTSNTSISPGTTTEAQRVDRIIK-NNHSLTIV 508
N + + T ++Y + P T + + R++ + + +++V
Sbjct: 304 TLSNQSFSNM-------TQLLTLILSY---NRLRCLPPRTFDGLKSLRLLSLHGNDISVV 353
Query: 509 LNNLKCSSPPDIKGLEVKAVPENSVHCESN 538
+ D+ L A+ N ++C+ N
Sbjct: 354 PEG----AFNDLSALSHLAIGANPLYCDCN 379
Score = 38 (18.4 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 8/30 (26%), Positives = 14/30 (46%)
Query: 507 IVLNNLKCSSPPDIKGLEVKAVPENSVHCE 536
IV N +C P +K + ++ V C+
Sbjct: 197 IVTGNPRCQKPYFLKEIPIQDVAIQDFTCD 226
>UNIPROTKB|F1NF14 [details] [associations]
symbol:SLIT3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0009887 "organ
morphogenesis" evidence=IEA] [GO:0010629 "negative regulation of
gene expression" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0032870 "cellular response to
hormone stimulus" evidence=IEA] [GO:0035385 "Roundabout signaling
pathway" evidence=IEA] [GO:0048495 "Roundabout binding"
evidence=IEA] [GO:0048846 "axon extension involved in axon
guidance" evidence=IEA] [GO:0050919 "negative chemotaxis"
evidence=IEA] [GO:0051414 "response to cortisol stimulus"
evidence=IEA] [GO:0061364 "apoptotic process involved in
luteolysis" evidence=IEA] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0008285 GO:GO:0005615 GO:GO:0030308 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 GO:GO:0032870 GO:GO:0010629 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0070100
Pfam:PF12661 Pfam:PF01463 GO:GO:0051414
GeneTree:ENSGT00700000104083 GO:GO:0050919 GO:GO:0035385
OMA:SVDCHGL EMBL:AADN02035923 IPI:IPI00587174
Ensembl:ENSGALT00000002967 ArrayExpress:F1NF14 Uniprot:F1NF14
Length = 1338
Score = 199 (75.1 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 46/135 (34%), Positives = 71/135 (52%)
Query: 22 CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSFYIELRSLDL 81
CPS+C C D + C++ GL V+P + +V + L N ++ V LS + L +DL
Sbjct: 539 CPSQCTCVDSVVR--CSNKGLRVMPKGIPKDVTELYLEGNHLTAVPKGLSAFRHLTLIDL 596
Query: 82 SVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTA 141
S N I+VL ++ F +L L +SYN + + F GL+ L+ L L N IS + + +
Sbjct: 597 SNNSISVLANYTFSNMTQLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGS 656
Query: 142 FRDTLHLELLILSFN 156
F D + L L L N
Sbjct: 657 FNDLVSLSHLALGTN 671
Score = 166 (63.5 bits), Expect = 9.2e-17, Sum P(3) = 9.2e-17
Identities = 44/133 (33%), Positives = 74/133 (55%)
Query: 75 ELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKI 134
++ + L N I V+ F KL ++IS N+IS ++ D FKGLK L +L L NKI
Sbjct: 122 DIWEIRLEQNLIKVIPPGAFTQYKKLKRIDISKNQISEIAPDAFKGLKSLISLVLYGNKI 181
Query: 135 SVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNL 194
+ I + F D + L+LL+L+ N I + F L +L++L L +N++ + + +
Sbjct: 182 TEIPQGLFDDLVSLQLLLLNANKINCLRVNT-FQGLHNLKLLSLYDNKLQTISKGLFA-- 238
Query: 195 PHQSLHYLYLNEN 207
P +S+ L+L +N
Sbjct: 239 PLRSIQTLHLAQN 251
Score = 164 (62.8 bits), Expect = 1.5e-16, Sum P(3) = 1.5e-16
Identities = 45/161 (27%), Positives = 82/161 (50%)
Query: 22 CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHY-TLSFYIELRSLD 80
CPS C C + ++ C GL +P L ++ I L +N I + + Y +L+ +D
Sbjct: 94 CPSACTCSNNVVD--CRGRGLTEIPANLPEDIWEIRLEQNLIKVIPPGAFTQYKKLKRID 151
Query: 81 LSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKT 140
+S N+I+ + F+ L++L + N+I+ + + F L L+ L L+ NKI+ +
Sbjct: 152 ISKNQISEIAPDAFKGLKSLISLVLYGNKITEIPQGLFDDLVSLQLLLLNANKINCLRVN 211
Query: 141 AFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNN 181
F+ +L+LL L N + +F+ L+S++ L L N
Sbjct: 212 TFQGLHNLKLLSLYDNKLQTISKG-LFAPLRSIQTLHLAQN 251
Score = 158 (60.7 bits), Expect = 6.9e-16, Sum P(3) = 6.9e-16
Identities = 51/161 (31%), Positives = 79/161 (49%)
Query: 21 ICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTII-LRENRISNVHYTLSF--YIELR 77
+CP +C+C + C++ L +P L PE T + L +N IS + F LR
Sbjct: 318 VCPEKCRC--EGTVVDCSNQKLTRLPSHL-PEYTTDLRLNDNDISVLEAIGLFKKLPNLR 374
Query: 78 SLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVI 137
++LS NKI + F+ + + L ++ N++ ++ F+GL LKTL L N IS I
Sbjct: 375 KINLSNNKIKEIREGTFDGASGVQELILTENQLESVHGRMFRGLTGLKTLMLRSNSISCI 434
Query: 138 NKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKL 178
N F + LL L N+I+ FS+L SL + L
Sbjct: 435 NNDTFAGLSSVRLLSLYDNHISTITPGA-FSTLVSLSTINL 474
Score = 155 (59.6 bits), Expect = 4.5e-06, Sum P(3) = 4.5e-06
Identities = 44/116 (37%), Positives = 59/116 (50%)
Query: 340 KCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINEN 398
K R+D+S N S I AFK L SL + + L N + I Q F D + L+ +++N N
Sbjct: 146 KLKRIDISKNQISEIAPDAFKGLKSL--ISLVLYGNKITEIPQGLFDDLVSLQLLLLNAN 203
Query: 399 MNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHF-PLERISFLDLSDNPLHCDCN 453
+ L FQG NLK +SL N L + F PL I L L+ NP CDC+
Sbjct: 204 -KINCLRVNTFQGLHNLKLLSLYDNKLQTISKGLFAPLRSIQTLHLAQNPFVCDCH 258
Score = 132 (51.5 bits), Expect = 9.2e-17, Sum P(3) = 9.2e-17
Identities = 43/123 (34%), Positives = 63/123 (51%)
Query: 335 PLGTLK-CDRLDLSGNNFSNIDSVAFKSLFSLK-LVKINLIPNLDSI-DQRAFVDNIQLE 391
P G K L L GN+ + + K L + + L I+L N S+ F + QL
Sbjct: 561 PKGIPKDVTELYLEGNHLTAVP----KGLSAFRHLTLIDLSNNSISVLANYTFSNMTQLS 616
Query: 392 TVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHL-EASHFPLERISFLDLSDNPLHC 450
T+I++ N L+ +P F G +L+ ++L GN +S + E S L +S L L NPLHC
Sbjct: 617 TLILSYN-RLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLVSLSHLALGTNPLHC 675
Query: 451 DCN 453
DCN
Sbjct: 676 DCN 678
Score = 111 (44.1 bits), Expect = 8.0e-15, Sum P(3) = 8.0e-15
Identities = 34/106 (32%), Positives = 59/106 (55%)
Query: 344 LDLSGNNFSNIDSVA-FKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNL 401
L L+ N+ S ++++ FK L +L+ KINL N + I + F ++ +I+ EN L
Sbjct: 351 LRLNDNDISVLEAIGLFKKLPNLR--KINLSNNKIKEIREGTFDGASGVQELILTENQ-L 407
Query: 402 KQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDN 446
+ + ++F+G T LK++ L+ NS+S + F L + L L DN
Sbjct: 408 ESVHGRMFRGLTGLKTLMLRSNSISCINNDTFAGLSSVRLLSLYDN 453
Score = 105 (42.0 bits), Expect = 2.5e-10, Sum P(3) = 2.5e-10
Identities = 40/140 (28%), Positives = 61/140 (43%)
Query: 23 PSRCQCFDQKLEASCTDAG-LEVVPI-QLNPEVQTIILRENRISNVHY-TLSFYIELRSL 79
PS + L + D LE + + + P ++ I L N+I + T ++ L
Sbjct: 341 PSHLPEYTTDLRLNDNDISVLEAIGLFKKLPNLRKINLSNNKIKEIREGTFDGASGVQEL 400
Query: 80 DLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINK 139
L+ N++ + F L L + N IS ++ DTF GL ++ L L N IS I
Sbjct: 401 ILTENQLESVHGRMFRGLTGLKTLMLRSNSISCINNDTFAGLSSVRLLSLYDNHISTITP 460
Query: 140 TAFRDTLHLE---LLILSFN 156
AF + L LL SFN
Sbjct: 461 GAFSTLVSLSTINLLANSFN 480
Score = 93 (37.8 bits), Expect = 4.0e-09, Sum P(3) = 4.0e-09
Identities = 34/133 (25%), Positives = 53/133 (39%)
Query: 151 LILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIE 210
L L+ N+I+ E +F L +LR + L NN+I ++ + L L EN +E
Sbjct: 351 LRLNDNDISVLEAIGLFKKLPNLRKINLSNNKIKEIREGTFDGA--SGVQELILTENQLE 408
Query: 211 TVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLS 270
+V F LT L TL L L ++ I S L
Sbjct: 409 SVHGRMFR-GLTGLKTLMLRSNSISCINNDTFAGLSSVRLLSLYDNHISTITPGAFSTLV 467
Query: 271 ALVNLDLSGNNFS 283
+L ++L N+F+
Sbjct: 468 SLSTINLLANSFN 480
Score = 84 (34.6 bits), Expect = 7.1e-12, Sum P(3) = 7.1e-12
Identities = 27/113 (23%), Positives = 57/113 (50%)
Query: 343 RLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNL 401
+++LS N I F ++ ++ L N L+S+ R F L+T+++ N ++
Sbjct: 375 KINLSNNKIKEIREGTFDGASGVQ--ELILTENQLESVHGRMFRGLTGLKTLMLRSN-SI 431
Query: 402 KQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPLHCDCN 453
+ + F G ++++ +SL N +S + F L +S ++L N +C+C+
Sbjct: 432 SCINNDTFAGLSSVRLLSLYDNHISTITPGAFSTLVSLSTINLLANSFNCNCH 484
Score = 63 (27.2 bits), Expect = 1.5e-09, Sum P(3) = 1.5e-09
Identities = 28/110 (25%), Positives = 44/110 (40%)
Query: 171 KSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALX 230
K + L L+ N + VP LS H +L + L+ N I + + +F +T L TL L
Sbjct: 566 KDVTELYLEGNHLTAVPKG-LSAFRHLTL--IDLSNNSISVLANYTFS-NMTQLSTLILS 621
Query: 231 XXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGN 280
LR+L ++P + L +L +L L N
Sbjct: 622 YNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLVSLSHLALGTN 671
Score = 53 (23.7 bits), Expect = 9.5e-09, Sum P(3) = 9.5e-09
Identities = 14/45 (31%), Positives = 22/45 (48%)
Query: 261 IPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIP 305
IP + L +L L L GN+ S++ +F L SL + + P
Sbjct: 628 IPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLVSLSHLALGTNP 672
Score = 48 (22.0 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 28/149 (18%), Positives = 60/149 (40%)
Query: 390 LETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFPLERISFLDLSDNPLH 449
+++V+ N L+ +P + + T L L+GN L+ + ++ +DLS+N +
Sbjct: 546 VDSVVRCSNKGLRVMPKGIPKDVTELY---LEGNHLTAVPKGLSAFRHLTLIDLSNNSIS 602
Query: 450 CDCNXXXXXXXXXXXXKSTMETTTVAYEMTSNTSISPGTTTEAQRVDRIIKNNHSLTIVL 509
N + + T ++Y + + RV + N+ +
Sbjct: 603 VLANYTFSNM-------TQLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGND------I 649
Query: 510 NNLKCSSPPDIKGLEVKAVPENSVHCESN 538
+++ S D+ L A+ N +HC+ N
Sbjct: 650 SSVPEGSFNDLVSLSHLALGTNPLHCDCN 678
Score = 48 (22.0 bits), Expect = 3.0e-08, Sum P(3) = 3.0e-08
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 260 AIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSL 296
A+P K LS L +DLS N+ S + + F ++ L
Sbjct: 580 AVP-KGLSAFRHLTLIDLSNNSISVLANYTFSNMTQL 615
Score = 46 (21.3 bits), Expect = 8.0e-15, Sum P(3) = 8.0e-15
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 507 IVLNNLKCSSPPDIKGLEVKAVPENSVHCESN 538
IV N +C P +K + ++ V CE N
Sbjct: 497 IVSGNPRCLKPFFLKDIPIQDVDAQDFTCEGN 528
Score = 44 (20.5 bits), Expect = 9.2e-17, Sum P(3) = 9.2e-17
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 496 DRIIKNNHSLTIVLNNLKCSSPPDIKG 522
D +NN + +NN C PP+ G
Sbjct: 816 DNDCENNSTCVDGINNYVCLCPPNYTG 842
Score = 38 (18.4 bits), Expect = 4.5e-06, Sum P(3) = 4.5e-06
Identities = 9/32 (28%), Positives = 17/32 (53%)
Query: 178 LDNNQILDVPNNVLSNLPHQSLHYLYLNENLI 209
L+NN I +P +++P + L L+ N +
Sbjct: 2 LNNNNITRIPVTSFNHMP--KIRTLRLHSNFL 31
>UNIPROTKB|Q6UY18 [details] [associations]
symbol:LINGO4 "Leucine-rich repeat and immunoglobulin-like
domain-containing nogo receptor-interacting protein 4" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 EMBL:AL589765
HSSP:Q9BZR6 HOGENOM:HOG000246971 HOVERGEN:HBG057546 EMBL:AY358115
IPI:IPI00258050 RefSeq:NP_001004432.1 UniGene:Hs.591477
ProteinModelPortal:Q6UY18 SMR:Q6UY18 STRING:Q6UY18
PhosphoSite:Q6UY18 DMDM:74762377 PRIDE:Q6UY18
Ensembl:ENST00000368820 GeneID:339398 KEGG:hsa:339398
UCSC:uc001ezf.1 CTD:339398 GeneCards:GC01M151775 HGNC:HGNC:31814
MIM:609794 neXtProt:NX_Q6UY18 PharmGKB:PA162394098 eggNOG:NOG306417
InParanoid:Q6UY18 OMA:EPPNGTL OrthoDB:EOG49KFQ7 GenomeRNAi:339398
NextBio:97381 Bgee:Q6UY18 CleanEx:HS_LINGO4 Genevestigator:Q6UY18
Uniprot:Q6UY18
Length = 593
Score = 177 (67.4 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 56/189 (29%), Positives = 84/189 (44%)
Query: 8 IFLILALTKLNKAICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVH 67
+FL+L L + CP+ C C Q C LE VP L + + + L NR+ +
Sbjct: 18 LFLLL-LPGGSGGSCPAVCDCTSQPQAVLCGHRQLEAVPGGLPLDTELLDLSGNRLWGLQ 76
Query: 68 Y-TLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKT 126
LS L+ LDLS N+++ L F LL L + N + + F GL L
Sbjct: 77 QGMLSRLSLLQELDLSYNQLSTLEPGAFHGLQSLLTLRLQGNRLRIMGPGVFSGLSALTL 136
Query: 127 LDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDV 186
LDL N+I + AF + L+ L + N++ + F+ L L L L+ + V
Sbjct: 137 LDLRLNQIVLFLDGAFGELGSLQKLEVGDNHLVFVAPGA-FAGLAKLSTLTLERCNLSTV 195
Query: 187 PNNVLSNLP 195
P L+ LP
Sbjct: 196 PGLALARLP 204
Score = 146 (56.5 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 78/307 (25%), Positives = 126/307 (41%)
Query: 123 ELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQ 182
+ + LDLS N++ + + L+ L LS+N ++ E F L+SL L+L N+
Sbjct: 61 DTELLDLSGNRLWGLQQGMLSRLSLLQELDLSYNQLSTLEPGA-FHGLQSLLTLRLQGNR 119
Query: 183 ILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXX 242
+ + V S L +L L LN+ I LD +F L +L L +
Sbjct: 120 LRIMGPGVFSGLSALTLLDLRLNQ--IVLFLDGAFG-ELGSLQKLEVGDNHLVFVAPGAF 176
Query: 243 VTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
L L +P L++L ALV L L + + + A + L LK ++I+
Sbjct: 177 AGLAKLSTLTLERCNLSTVPGLALARLPALVALRLRELDIGRLPAGALRGLGQLKELEIH 236
Query: 303 LIPNLDSIDQXXXXXXXXXXXXXXXXXAFSLT--PLGTLKCDR-LDLSGNNFSNIDSVAF 359
L P+L+++D S+ L L R LDLS N S I +
Sbjct: 237 LWPSLEALDPGSLVGLNLSSLAITRCNLSSVPFQALYHLSFLRVLDLSQNPISAIPARRL 296
Query: 360 KSLFSLKLVKINLIPNLDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVS 419
L L+ ++++ L SI AF + + +N L+ L F L ++
Sbjct: 297 SPLVRLQELRLSGAC-LTSIAAHAFHGLTAFHLLDVADNA-LQTLEETAFPSPDKLVTLR 354
Query: 420 LKGNSLS 426
L GN L+
Sbjct: 355 LSGNPLT 361
Score = 109 (43.4 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 30/103 (29%), Positives = 55/103 (53%)
Query: 353 NIDSVAFKSLFSLKLVKI-NLIPN-LDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQ 410
N+ SV F++L+ L +++ +L N + +I R ++L+ + ++ L + + F
Sbjct: 263 NLSSVPFQALYHLSFLRVLDLSQNPISAIPARRLSPLVRLQELRLS-GACLTSIAAHAFH 321
Query: 411 GNTNLKSVSLKGNSLSHLEASHFPL-ERISFLDLSDNPLHCDC 452
G T + + N+L LE + FP +++ L LS NPL CDC
Sbjct: 322 GLTAFHLLDVADNALQTLEETAFPSPDKLVTLRLSGNPLTCDC 364
>FB|FBgn0036494 [details] [associations]
symbol:Toll-6 "Toll-6" species:7227 "Drosophila melanogaster"
[GO:0004888 "transmembrane signaling receptor activity"
evidence=ISS;NAS] [GO:0005886 "plasma membrane" evidence=NAS]
[GO:0016021 "integral to membrane" evidence=ISS] [GO:0006952
"defense response" evidence=NAS] [GO:0007165 "signal transduction"
evidence=IEA;ISS] Pfam:PF00560 InterPro:IPR000157
InterPro:IPR001611 Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450
SMART:SM00255 GO:GO:0016021 InterPro:IPR003591 SMART:SM00369
GO:GO:0045087 GO:GO:0005622 InterPro:IPR000372 SMART:SM00013
GO:GO:0004888 SUPFAM:SSF52200 HSSP:O60603 FlyBase:FBgn0036494
EMBL:AF247766 ProteinModelPortal:Q9NBK9 STRING:Q9NBK9 PRIDE:Q9NBK9
InParanoid:Q9NBK9 ArrayExpress:Q9NBK9 Bgee:Q9NBK9 Uniprot:Q9NBK9
Length = 1514
Score = 241 (89.9 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 110/410 (26%), Positives = 187/410 (45%)
Query: 53 VQTIILRENRISNV-HYTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLN-LNISYNEI 110
++ + + N IS + LS L+ L+LS NKI L + F Q K++ + + N I
Sbjct: 303 LRVLSVNNNGISMIADKALSGLKNLQILNLSSNKIVALPTELFAEQAKIIQEVYLQNNSI 362
Query: 111 SALSKDTFKGLKELKTLDLSYNKISV--INKTAFRDTLHLELLILSFNNITYFEDSEIFS 168
S L+ F L +L+ LDLS N+I+ I+K F + L LL LS N +T E EIFS
Sbjct: 363 SVLNPQLFSNLDQLQALDLSMNQITSTWIDKNTFVGLIRLVLLNLSHNKLTKLEP-EIFS 421
Query: 169 SLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLA 228
L +L+IL L +NQ+ ++ + + P +LH L L+ N ++ LD + L L+ L+
Sbjct: 422 DLYTLQILNLRHNQLENIAADTFA--PMNNLHTLLLSHNKLK-YLD---AYALNGLYVLS 475
Query: 229 LXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLS--KLSALVNLDLSGNNFSNID 286
L R + T L+ + L +DL N + ++
Sbjct: 476 LLSLDNNALIGVHPDAFRNCSALQDLNLNGNQLKTVPLALRNMRHLRTVDLGENMITVME 535
Query: 287 SVAFK---SLFSLKLVKINLIPNLD-----SIDQXXXXXXXXXXXXXXXXXAFSLTPLGT 338
AFK +L+ L+L+ N + N+ + AF +T +
Sbjct: 536 DSAFKGLGNLYGLRLIG-NYLENITMHTFRDLPNLQILNLARNRIAVVEPGAFEMT--SS 592
Query: 339 LKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINE 397
++ RLD GN ++I+ + F ++ SL + +N+ N L+S D V + L+ + +++
Sbjct: 593 IQAVRLD--GNELNDINGL-FSNMPSL--LWLNISDNRLESFDY-GHVPST-LQWLDLHK 645
Query: 398 NMNLKQLPSKL-FQGNTNLKSVSLKGNSLSHLEASHFPLERISFLDLSDN 446
N L L ++ L+++ + N L + S P I L L+DN
Sbjct: 646 N-RLSSLSNRFGLDSELKLQTLDVSFNQLQRIGPSSIP-NSIELLFLNDN 693
Score = 238 (88.8 bits), Expect = 3.5e-16, P = 3.5e-16
Identities = 106/417 (25%), Positives = 185/417 (44%)
Query: 53 VQTIILRENRISNVHYTL-SFYIELRSLDLSVNKINV--LGSHNFEYQNKLLNLNISYNE 109
+Q + L+ N IS ++ L S +L++LDLS+N+I + + F +L+ LN+S+N+
Sbjct: 352 IQEVYLQNNSISVLNPQLFSNLDQLQALDLSMNQITSTWIDKNTFVGLIRLVLLNLSHNK 411
Query: 110 ISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSS 169
++ L + F L L+ L+L +N++ I F +L L+LS N + Y D+ +
Sbjct: 412 LTKLEPEIFSDLYTLQILNLRHNQLENIAADTFAPMNNLHTLLLSHNKLKYL-DAYALNG 470
Query: 170 LKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTN---LHT 226
L L +L LDNN ++ V + N +L L LN N ++TV P L N L T
Sbjct: 471 LYVLSLLSLDNNALIGVHPDAFRNC--SALQDLNLNGNQLKTV-----PLALRNMRHLRT 523
Query: 227 LALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNID 286
+ L L L+ I L L L+L+ N + ++
Sbjct: 524 VDLGENMITVMEDSAFKGLGNLYGLRLIGNYLENITMHTFRDLPNLQILNLARNRIAVVE 583
Query: 287 SVAFKSLFSLKLVKI--NLIPNLDSI-DQXXXXXXXXXXXXXXXXXAFSLTPLGTLKCDR 343
AF+ S++ V++ N + +++ + + P TL+
Sbjct: 584 PGAFEMTSSIQAVRLDGNELNDINGLFSNMPSLLWLNISDNRLESFDYGHVP-STLQW-- 640
Query: 344 LDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNLK 402
LDL N S++ + F LKL +++ N L I + ++I+L + +N+N+ +
Sbjct: 641 LDLHKNRLSSLSN-RFGLDSELKLQTLDVSFNQLQRIGPSSIPNSIEL--LFLNDNL-IT 696
Query: 403 QLPSKLFQGNTNLKSVSLKGNSLSHLEASHF---PL-ERISFLD--LSDNPLHCDCN 453
+ F TNL V L N ++ L+ P+ E + + + NP CDCN
Sbjct: 697 TVDPDTFMHKTNLTRVDLYANQITTLDIKSLRILPVWEHRALPEFYIGGNPFTCDCN 753
Score = 196 (74.1 bits), Expect = 9.6e-14, Sum P(2) = 9.6e-14
Identities = 84/333 (25%), Positives = 137/333 (41%)
Query: 52 EVQTIILRENRISNVHYTLSFY---IELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYN 108
++Q + L N+I++ + + I L L+LS NK+ L F L LN+ +N
Sbjct: 375 QLQALDLSMNQITSTWIDKNTFVGLIRLVLLNLSHNKLTKLEPEIFSDLYTLQILNLRHN 434
Query: 109 EISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFS 168
++ ++ DTF + L TL LS+NK+ ++ A L LL L NN + F
Sbjct: 435 QLENIAADTFAPMNNLHTLLLSHNKLKYLDAYALNGLYVLSLLSLD-NNALIGVHPDAFR 493
Query: 169 SLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLA 228
+ +L+ L L+ NQ+ VP L N+ H L + L EN+I + D++F L NL+ L
Sbjct: 494 NCSALQDLNLNGNQLKTVPL-ALRNMRH--LRTVDLGENMITVMEDSAFK-GLGNLYGLR 549
Query: 229 LXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSV 288
L L L + S++ + L GN ++I+ +
Sbjct: 550 LIGNYLENITMHTFRDLPNLQILNLARNRIAVVEPGAFEMTSSIQAVRLDGNELNDINGL 609
Query: 289 AFKSLFSLKLVKI--NLIPNLD--SIDQXXXXXXXXXXXXXXXXXAFSLTPLGTLKCDRL 344
F ++ SL + I N + + D + F L LK L
Sbjct: 610 -FSNMPSLLWLNISDNRLESFDYGHVPSTLQWLDLHKNRLSSLSNRFGLD--SELKLQTL 666
Query: 345 DLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLD 377
D+S N I + + L + NLI +D
Sbjct: 667 DVSFNQLQRIGPSSIPNSIELLFLNDNLITTVD 699
Score = 194 (73.4 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 96/385 (24%), Positives = 159/385 (41%)
Query: 74 IELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNK 133
++L LD+S N VL ++ F +L L+++ N IS ++ GLK L+ L+LS NK
Sbjct: 277 LDLEYLDVSHNDFVVLPANGFGTLRRLRVLSVNNNGISMIADKALSGLKNLQILNLSSNK 336
Query: 134 ISVINKTAFRDTLHL-ELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILD--VPNNV 190
I + F + + + + L N+I+ + ++FS+L L+ L L NQI + N
Sbjct: 337 IVALPTELFAEQAKIIQEVYLQNNSISVL-NPQLFSNLDQLQALDLSMNQITSTWIDKNT 395
Query: 191 LSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHX 250
L L L L+ N + T L+ L L L L + LH
Sbjct: 396 FVGLIRLVL--LNLSHNKL-TKLEPEIFSDLYTLQILNLRHNQLENIAADTFAPMNNLHT 452
Query: 251 XXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN-----LIP 305
+ L+ L L L L N + AF++ +L+ + +N +P
Sbjct: 453 LLLSHNKLKYLDAYALNGLYVLSLLSLDNNALIGVHPDAFRNCSALQDLNLNGNQLKTVP 512
Query: 306 -NLDSIDQXXXXXXXXXXXXXXXXXAFSLTPLGTLKCDRLDLSGNNFSNIDSVAFKSLFS 364
L ++ AF LG L L L GN NI F+ L +
Sbjct: 513 LALRNMRHLRTVDLGENMITVMEDSAFK--GLGNLY--GLRLIGNYLENITMHTFRDLPN 568
Query: 365 LKLVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGN 423
L++ +NL N + ++ AF ++ V ++ N L + + LF +L +++ N
Sbjct: 569 LQI--LNLARNRIAVVEPGAFEMTSSIQAVRLDGN-ELNDI-NGLFSNMPSLLWLNISDN 624
Query: 424 SLSHLEASHFPLERISFLDLSDNPL 448
L + H P + +LDL N L
Sbjct: 625 RLESFDYGHVP-STLQWLDLHKNRL 648
Score = 165 (63.1 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 94/378 (24%), Positives = 154/378 (40%)
Query: 89 LGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKIS------VINKTAF 142
L + +F + +L L+I Y ++ L + GL++L+ L L + I I AF
Sbjct: 137 LEAQSFAHLVRLQQLSIQYCKLGRLGRQVLDGLEQLRNLTLRTHNILWPALNFEIEADAF 196
Query: 143 RDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYL 202
T LE L LS NNI D+ IF +L L L + N++ DV + + +
Sbjct: 197 SVTRRLERLDLSSNNIWSLPDN-IFCTLSELSALNMSENRLQDVNELGFRDRSQEPTNGS 255
Query: 203 YLNENLIETVLDNSFPFTLTNLHT--LALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXA 260
+ + E+ +S T +L L + TLR L
Sbjct: 256 TESTSTTESAKKSSSSSTSCSLDLEYLDVSHNDFVVLPANGFGTLRRLRVLSVNNNGISM 315
Query: 261 IPTKQLSKLSALVNLDLSGNNFSNIDSVAF----KSLFSLKLVK--INLI-PNLDS-IDQ 312
I K LS L L L+LS N + + F K + + L I+++ P L S +DQ
Sbjct: 316 IADKALSGLKNLQILNLSSNKIVALPTELFAEQAKIIQEVYLQNNSISVLNPQLFSNLDQ 375
Query: 313 XXXXXXXXXXXXXXXXXAFSLTPLGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINL 372
T +G ++ L+LS N + ++ F L++L++ +NL
Sbjct: 376 LQALDLSMNQITSTWID--KNTFVGLIRLVLLNLSHNKLTKLEPEIFSDLYTLQI--LNL 431
Query: 373 IPN-LDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEAS 431
N L++I F L T++++ N LK L + G L +SL N+L +
Sbjct: 432 RHNQLENIAADTFAPMNNLHTLLLSHN-KLKYLDAYALNGLYVLSLLSLDNNALIGVHPD 490
Query: 432 HFP-LERISFLDLSDNPL 448
F + L+L+ N L
Sbjct: 491 AFRNCSALQDLNLNGNQL 508
Score = 162 (62.1 bits), Expect = 6.3e-08, P = 6.3e-08
Identities = 96/380 (25%), Positives = 156/380 (41%)
Query: 75 ELRSLDLSVNKINVLGSHNFEYQ-------NKLLNLNISYNEISALSKDTFKGLKELKTL 127
+LR+L L + I + + NFE + +L L++S N I +L + F L EL L
Sbjct: 171 QLRNLTLRTHNI-LWPALNFEIEADAFSVTRRLERLDLSSNNIWSLPDNIFCTLSELSAL 229
Query: 128 DLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKS-----LRILKLDNNQ 182
++S N++ +N+ FRD E S + + E ++ SS + L L + +N
Sbjct: 230 NMSENRLQDVNELGFRDRSQ-EPTNGSTESTSTTESAKKSSSSSTSCSLDLEYLDVSHND 288
Query: 183 ILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXX 242
+ +P N L + L L +N N I + D + L NL L L
Sbjct: 289 FVVLPANGFGTL--RRLRVLSVNNNGISMIADKALS-GLKNLQILNLSSNKIVALPTELF 345
Query: 243 VTLRTLHXXXXXXXXXXAIPTKQL-SKLSALVNLDLSGNNFSN--IDSVAFKSLFSLKLV 299
+ ++ QL S L L LDLS N ++ ID F L L L+
Sbjct: 346 AEQAKIIQEVYLQNNSISVLNPQLFSNLDQLQALDLSMNQITSTWIDKNTFVGLIRLVLL 405
Query: 300 KIN------LIPNLDSIDQXXXXXXXXXXXXXXXXXAFSLTPLGTLKCDRLDLSGNNFSN 353
++ L P + S D A + P+ L L LS N
Sbjct: 406 NLSHNKLTKLEPEIFS-DLYTLQILNLRHNQLENIAADTFAPMNNLHT--LLLSHNKLKY 462
Query: 354 IDSVAFKSLFSLKLVKINLIPNLDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNT 413
+D+ A L+ L L+ ++ L + AF + L+ + +N N LK +P L +
Sbjct: 463 LDAYALNGLYVLSLLSLDNNA-LIGVHPDAFRNCSALQDLNLNGNQ-LKTVPLAL-RNMR 519
Query: 414 NLKSVSLKGNSLSHLEASHF 433
+L++V L N ++ +E S F
Sbjct: 520 HLRTVDLGENMITVMEDSAF 539
Score = 150 (57.9 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 86/357 (24%), Positives = 140/357 (39%)
Query: 111 SALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITY----FE-DSE 165
S L +F L L+ L + Y K+ + + L L L +NI + FE +++
Sbjct: 135 SRLEAQSFAHLVRLQQLSIQYCKLGRLGRQVLDGLEQLRNLTLRTHNILWPALNFEIEAD 194
Query: 166 IFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTL---T 222
FS + L L L +N I +P+N+ L L L ++EN ++ V + F T
Sbjct: 195 AFSVTRRLERLDLSSNNIWSLPDNIFCTL--SELSALNMSENRLQDVNELGFRDRSQEPT 252
Query: 223 NLHTLALXXXXXXXXXXXXXVTLRT-LHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNN 281
N T + + L +P L L L ++ N
Sbjct: 253 NGSTESTSTTESAKKSSSSSTSCSLDLEYLDVSHNDFVVLPANGFGTLRRLRVLSVNNNG 312
Query: 282 FSNIDSVAFKSLFSLKLVKI--NLIPNLDSIDQXXXXXXXXXXXXXXXXXAFS-LTPLGT 338
S I A L +L+++ + N I L + + + S L P
Sbjct: 313 ISMIADKALSGLKNLQILNLSSNKIVALPT--ELFAEQAKIIQEVYLQNNSISVLNPQLF 370
Query: 339 LKCDRL---DLSGNNFSN--IDSVAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLET 392
D+L DLS N ++ ID F L ++LV +NL N L ++ F D L+
Sbjct: 371 SNLDQLQALDLSMNQITSTWIDKNTFVGL--IRLVLLNLSHNKLTKLEPEIFSDLYTLQI 428
Query: 393 VIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPL 448
+ + N L+ + + F NL ++ L N L +L+A L +S L L +N L
Sbjct: 429 LNLRHNQ-LENIAADTFAPMNNLHTLLLSHNKLKYLDAYALNGLYVLSLLSLDNNAL 484
Score = 127 (49.8 bits), Expect = 0.00038, P = 0.00038
Identities = 45/166 (27%), Positives = 77/166 (46%)
Query: 22 CPSRCQCF-DQKLEAS---CTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSFYIELR 77
CP+ C CF DQ + C+ A +P ++ + + + N V ++ +
Sbjct: 826 CPTNCTCFHDQTWSTNIVECSGAAYSEMPRRVPMDTSELYIDGNNF--VELAGHSFLGRK 883
Query: 78 SLD-LSVNKINVLGSHN--FEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKI 134
+L L N NV +N F +LL L++ N I +L + F L+ L+ L L NKI
Sbjct: 884 NLAVLYANNSNVAHIYNTTFSGLKRLLILHLEDNHIISLEGNEFHNLENLRELYLQSNKI 943
Query: 135 SVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDN 180
+ I +F+ LE+L L N + +FE ++ ++ + I DN
Sbjct: 944 ASIANGSFQMLRKLEVLRLDGNRLMHFEVWQLSANPYLVEISLADN 989
Score = 71 (30.1 bits), Expect = 9.6e-14, Sum P(2) = 9.6e-14
Identities = 30/111 (27%), Positives = 52/111 (46%)
Query: 346 LSGNNFSNIDSVAFKSLFS-LK-LVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNLK 402
L NN SN+ + + + FS LK L+ ++L N + S++ F + L + + N +
Sbjct: 888 LYANN-SNVAHI-YNTTFSGLKRLLILHLEDNHIISLEGNEFHNLENLRELYLQSN-KIA 944
Query: 403 QLPSKLFQGNTNLKSVSLKGNSLSHLEASHFPLER-ISFLDLSDNPLHCDC 452
+ + FQ L+ + L GN L H E + + L+DN C+C
Sbjct: 945 SIANGSFQMLRKLEVLRLDGNRLMHFEVWQLSANPYLVEISLADNQWSCEC 995
Score = 53 (23.7 bits), Expect = 7.0e-12, Sum P(2) = 7.0e-12
Identities = 19/75 (25%), Positives = 32/75 (42%)
Query: 375 NLDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP 434
N + +F+ L + N N N+ + + F G L + L+ N + LE + F
Sbjct: 870 NFVELAGHSFLGRKNLAVLYAN-NSNVAHIYNTTFSGLKRLLILHLEDNHIISLEGNEFH 928
Query: 435 -LERISFLDLSDNPL 448
LE + L L N +
Sbjct: 929 NLENLRELYLQSNKI 943
>UNIPROTKB|F1MLX5 [details] [associations]
symbol:LGR4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090190 "positive regulation of branching involved in
ureteric bud morphogenesis" evidence=IEA] [GO:0072282 "metanephric
nephron tubule morphogenesis" evidence=IEA] [GO:0072224
"metanephric glomerulus development" evidence=IEA] [GO:0072202
"cell differentiation involved in metanephros development"
evidence=IEA] [GO:0061290 "canonical Wnt receptor signaling pathway
involved in metanephric kidney development" evidence=IEA]
[GO:0050673 "epithelial cell proliferation" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0030539 "male genitalia
development" evidence=IEA] [GO:0016500 "protein-hormone receptor
activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002131 InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237
PRINTS:PR00373 PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021
GO:GO:0045892 GO:GO:0045893 InterPro:IPR003591 SMART:SM00369
GO:GO:0030539 GO:GO:0090190 GO:GO:0050673 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0016500
GeneTree:ENSGT00650000092962 GO:GO:0061290 GO:GO:0072282
OMA:DGYWSDC GO:GO:0072202 GO:GO:0072224 EMBL:DAAA02041144
IPI:IPI00713357 Ensembl:ENSBTAT00000003370 Uniprot:F1MLX5
Length = 1034
Score = 238 (88.8 bits), Expect = 2.1e-16, P = 2.1e-16
Identities = 112/387 (28%), Positives = 170/387 (43%)
Query: 70 LSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDL 129
LS + +L LD+S+N I L F+ L L ++ N++S + GLKELK L L
Sbjct: 138 LSAFTQL--LDISMNNITQLPEDAFKNFPFLEELRLAGNDLSFIHPKALSGLKELKVLTL 195
Query: 130 SYNKISVINKTAFRDTLHLELLILSFNNITYF-EDSEIFSSLKSLRILKLDNNQILDVPN 188
N++ + A R L+ L L N+IT EDS F L LR L LD+N + +VP
Sbjct: 196 QNNQLKTVPSEAIRGLSSLQSLRLDANHITSVPEDS--FEGLTQLRHLWLDDNSLTEVPV 253
Query: 189 NVLSNLPHQSLHYLYLNENLIETVLDNSFPFT-LTNLHTLALXXXXXXXXXXXXXVTLRT 247
+ LSNLP +L L L N I ++ D F FT L++L L L L
Sbjct: 254 HPLSNLP--TLQALTLALNKISSIPD--FAFTNLSSLVVLHLHNNKIKSLGQHCFDGLDN 309
Query: 248 LHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKI--NLIP 305
L P + + L +L L N+ S I AF LK + + N +
Sbjct: 310 LETLDLNYNNLGEFP-QAIKALPSLKELLFHSNSISVIPDGAFDGNPLLKTIHLYDNPLS 368
Query: 306 NL-DSIDQXXXXXXXXXXXXXXXXXAF-SLTPLGTLKCDRLDLSGNNFSNIDSVAFKSLF 363
+ +S F +LT GT++ + L L+G S+I + +
Sbjct: 369 FVGNSAFHNLSELHSLVIRGASMVQRFPNLT--GTVRLESLTLTGTKISSISNNLCQEQK 426
Query: 364 SLKLVKINLIPNLDSI-DQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKG 422
L+ + ++ +SI D +F LE + + N + Q+ FQG T+LK + L
Sbjct: 427 RLRTLDLSY----NSIKDLPSFNGCHALEEISLQRNQ-IHQIKEDTFQGLTSLKILDLSR 481
Query: 423 NSLSHLEASHFP-LERISFLDLSDNPL 448
N + ++ F L I+ LD+S N L
Sbjct: 482 NLIHEIDDRAFAKLGSITNLDVSFNEL 508
Score = 183 (69.5 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 94/427 (22%), Positives = 174/427 (40%)
Query: 21 ICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNV-HYTLSFYIELRSL 79
+C + C C D C+ GL VP L+ Q + + N I+ + + L L
Sbjct: 111 LCAAPCSC-DGDRRVDCSGKGLTAVPEGLSAFTQLLDISMNNITQLPEDAFKNFPFLEEL 169
Query: 80 DLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINK 139
L+ N ++ + +L L + N++ + + +GL L++L L N I+ + +
Sbjct: 170 RLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAIRGLSSLQSLRLDANHITSVPE 229
Query: 140 TAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSL 199
+F L L L N++T + S+L +L+ L L N+I +P+ +NL SL
Sbjct: 230 DSFEGLTQLRHLWLDDNSLTEVPVHPL-SNLPTLQALTLALNKISSIPDFAFTNL--SSL 286
Query: 200 HYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXX 259
L+L+ N I+++ + F L NL TL L L +L
Sbjct: 287 VVLHLHNNKIKSLGQHCFD-GLDNLETLDLNYNNLGEFPQAIKA-LPSLKELLFHSNSIS 344
Query: 260 AIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKI---NLIPNLDSIDQXXXX 316
IP L + L N S + + AF +L L + I +++ ++
Sbjct: 345 VIPDGAFDGNPLLKTIHLYDNPLSFVGNSAFHNLSELHSLVIRGASMVQRFPNLTGTVRL 404
Query: 317 XXXXXXXXXXXXXAFSLTPLGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN- 375
+ +L + LDLS N+ ++ S F +L+ +I+L N
Sbjct: 405 ESLTLTGTKISSISNNLCQ-EQKRLRTLDLSYNSIKDLPS--FNGCHALE--EISLQRNQ 459
Query: 376 LDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFPL 435
+ I + F L+ + ++ N+ + ++ + F K S+ +S E + FP
Sbjct: 460 IHQIKEDTFQGLTSLKILDLSRNL-IHEIDDRAFA-----KLGSITNLDVSFNELTSFPT 513
Query: 436 ERISFLD 442
E ++ L+
Sbjct: 514 EGLNGLN 520
Score = 170 (64.9 bits), Expect = 5.4e-09, P = 5.4e-09
Identities = 78/325 (24%), Positives = 139/325 (42%)
Query: 52 EVQTIILRENRISNVH-YTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEI 110
+++ + L +N ++ V + LS L++L L++NKI+ + F + L+ L++ N+I
Sbjct: 237 QLRHLWLDDNSLTEVPVHPLSNLPTLQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKI 296
Query: 111 SALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSL 170
+L + F GL L+TLDL+YN + + A + L+ L+ N+I+ D F
Sbjct: 297 KSLGQHCFDGLDNLETLDLNYNNLGEFPQ-AIKALPSLKELLFHSNSISVIPDGA-FDGN 354
Query: 171 KSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLN-ENLIETVLDNSFP-FTLT-NLHTL 227
L+ + L +N + V N+ NL LH L + ++++ FP T T L +L
Sbjct: 355 PLLKTIHLYDNPLSFVGNSAFHNL--SELHSLVIRGASMVQR-----FPNLTGTVRLESL 407
Query: 228 ALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDS 287
L + L +P+ + AL + L N I
Sbjct: 408 TLTGTKISSISNNLCQEQKRLRTLDLSYNSIKDLPS--FNGCHALEEISLQRNQIHQIKE 465
Query: 288 VAFKSLFSLKLVKI--NLIPNLDSIDQXXXXXXXXXXXXXXXXXAFSLTPLGTLKCDRLD 345
F+ L SLK++ + NLI +D D+ S G ++L
Sbjct: 466 DTFQGLTSLKILDLSRNLIHEID--DRAFAKLGSITNLDVSFNELTSFPTEGLNGLNQLK 523
Query: 346 LSGNNFSNIDSVAFKSLFSLKLVKI 370
L GN F +++A K +L+ + +
Sbjct: 524 LVGN-FKLKEALAAKDFVNLRSLSV 547
Score = 146 (56.5 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 50/153 (32%), Positives = 78/153 (50%)
Query: 53 VQTIILRENRISNVHYTL-SFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEIS 111
++++ L +IS++ L LR+LDLS N I L S F + L +++ N+I
Sbjct: 404 LESLTLTGTKISSISNNLCQEQKRLRTLDLSYNSIKDLPS--FNGCHALEEISLQRNQIH 461
Query: 112 ALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLK 171
+ +DTF+GL LK LDLS N I I+ AF + L +SFN +T F +E + L
Sbjct: 462 QIKEDTFQGLTSLKILDLSRNLIHEIDDRAFAKLGSITNLDVSFNELTSFP-TEGLNGLN 520
Query: 172 SLRIL-KLDNNQILDVPNNVLSNLPHQSLHYLY 203
L+++ + L + V NL S+ Y Y
Sbjct: 521 QLKLVGNFKLKEALAAKDFV--NLRSLSVPYAY 551
>ZFIN|ZDB-GENE-080327-8 [details] [associations]
symbol:lrrtm2 "leucine rich repeat transmembrane
neuronal 2" species:7955 "Danio rerio" [GO:0005515 "protein
binding" evidence=IPI] [GO:0042802 "identical protein binding"
evidence=IDA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
ZFIN:ZDB-GENE-080327-8 InterPro:IPR003591 SMART:SM00369
GO:GO:0042802 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GeneTree:ENSGT00700000104056 EMBL:CR381529 EMBL:CU681852
IPI:IPI00866135 Ensembl:ENSDART00000105477
Ensembl:ENSDART00000130532 Uniprot:F1Q8H9
Length = 543
Score = 232 (86.7 bits), Expect = 3.0e-16, P = 3.0e-16
Identities = 72/233 (30%), Positives = 114/233 (48%)
Query: 79 LDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVIN 138
L L N I+ L S F +L L++ +N+I+ + +D F+GL +LK L+LS N+I+ +
Sbjct: 67 LSLRHNSISELSSDQFFGFTQLTWLHLDHNQITTVHEDAFQGLYKLKDLNLSSNRITKLP 126
Query: 139 KTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQS 198
T F ++L++L LSFN +T E E+F L+ L+IL L +N + P + +S
Sbjct: 127 NTTFIHLINLQILDLSFNQMTALEP-ELFHGLRKLQILHLRSNSLRTTPVRAFWDC--RS 183
Query: 199 LHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXX 258
L YL L+ N + ++ N F L L L L L L
Sbjct: 184 LEYLGLSNNRLRSLARNGFA-GLIKLRELHLEHNHLTKINLAHFPRLVALQFLYLQWNKI 242
Query: 259 XAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKI--NLIPNLDS 309
+ + K + L LDL+GN + F++L SLK++ + N + NLDS
Sbjct: 243 NNLTSTMEWKWTTLEKLDLTGNEIRVLIPEVFETLPSLKILLLDNNKLSNLDS 295
Score = 218 (81.8 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 80/299 (26%), Positives = 125/299 (41%)
Query: 5 LTCIFLILALTKLNKAICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRIS 64
L I ++L L ++ CP +C+C D L+ C GL P ++ + LR N IS
Sbjct: 18 LCVISMLLCLPPVSCTTCPQKCRCED--LQFYCDTQGLLAPPDGVDKGALGLSLRHNSIS 75
Query: 65 NVHYTLSF-YIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKE 123
+ F + +L L L N+I + F+ KL +LN+S N I+ L TF L
Sbjct: 76 ELSSDQFFGFTQLTWLHLDHNQITTVHEDAFQGLYKLKDLNLSSNRITKLPNTTFIHLIN 135
Query: 124 LKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQI 183
L+ LDLS+N+++ + F L++L L N++ F +SL L L NN++
Sbjct: 136 LQILDLSFNQMTALEPELFHGLRKLQILHLRSNSLRT-TPVRAFWDCRSLEYLGLSNNRL 194
Query: 184 LDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXV 243
+ N + L L L+L N + + FP L L L L
Sbjct: 195 RSLARNGFAGLI--KLRELHLEHNHLTKINLAHFP-RLVALQFLYLQWNKINNLTSTMEW 251
Query: 244 TLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
TL + + L +L L L N SN+DS SL ++ ++
Sbjct: 252 KWTTLEKLDLTGNEIRVLIPEVFETLPSLKILLLDNNKLSNLDSQTMDMWKSLNVIGLS 310
>UNIPROTKB|F1NL15 [details] [associations]
symbol:SLIT3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005576
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 Pfam:PF12661
Pfam:PF01463 GeneTree:ENSGT00700000104083 EMBL:AADN02035923
IPI:IPI00818500 Ensembl:ENSGALT00000041140 ArrayExpress:F1NL15
Uniprot:F1NL15
Length = 1094
Score = 199 (75.1 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 46/135 (34%), Positives = 71/135 (52%)
Query: 22 CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSFYIELRSLDL 81
CPS+C C D + C++ GL V+P + +V + L N ++ V LS + L +DL
Sbjct: 295 CPSQCTCVDSVVR--CSNKGLRVMPKGIPKDVTELYLEGNHLTAVPKGLSAFRHLTLIDL 352
Query: 82 SVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTA 141
S N I+VL ++ F +L L +SYN + + F GL+ L+ L L N IS + + +
Sbjct: 353 SNNSISVLANYTFSNMTQLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGS 412
Query: 142 FRDTLHLELLILSFN 156
F D + L L L N
Sbjct: 413 FNDLVSLSHLALGTN 427
Score = 158 (60.7 bits), Expect = 3.4e-16, Sum P(3) = 3.4e-16
Identities = 51/161 (31%), Positives = 79/161 (49%)
Query: 21 ICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTII-LRENRISNVHYTLSF--YIELR 77
+CP +C+C + C++ L +P L PE T + L +N IS + F LR
Sbjct: 74 VCPEKCRC--EGTVVDCSNQKLTRLPSHL-PEYTTDLRLNDNDISVLEAIGLFKKLPNLR 130
Query: 78 SLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVI 137
++LS NKI + F+ + + L ++ N++ ++ F+GL LKTL L N IS I
Sbjct: 131 KINLSNNKIKEIREGTFDGASGVQELILTENQLESVHGRMFRGLTGLKTLMLRSNSISCI 190
Query: 138 NKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKL 178
N F + LL L N+I+ FS+L SL + L
Sbjct: 191 NNDTFAGLSSVRLLSLYDNHISTITPGA-FSTLVSLSTINL 230
Score = 132 (51.5 bits), Expect = 3.4e-16, Sum P(3) = 3.4e-16
Identities = 43/123 (34%), Positives = 63/123 (51%)
Query: 335 PLGTLK-CDRLDLSGNNFSNIDSVAFKSLFSLK-LVKINLIPNLDSI-DQRAFVDNIQLE 391
P G K L L GN+ + + K L + + L I+L N S+ F + QL
Sbjct: 317 PKGIPKDVTELYLEGNHLTAVP----KGLSAFRHLTLIDLSNNSISVLANYTFSNMTQLS 372
Query: 392 TVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHL-EASHFPLERISFLDLSDNPLHC 450
T+I++ N L+ +P F G +L+ ++L GN +S + E S L +S L L NPLHC
Sbjct: 373 TLILSYN-RLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLVSLSHLALGTNPLHC 431
Query: 451 DCN 453
DCN
Sbjct: 432 DCN 434
Score = 126 (49.4 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 36/105 (34%), Positives = 52/105 (49%)
Query: 103 LNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFE 162
L + N ++A+ K + L +DLS N ISV+ F + L LILS+N +
Sbjct: 327 LYLEGNHLTAVPKG-LSAFRHLTLIDLSNNSISVLANYTFSNMTQLSTLILSYNRLRCIP 385
Query: 163 DSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNEN 207
F+ L+SLR+L L N I VP ++L SL +L L N
Sbjct: 386 -VHAFNGLRSLRVLTLHGNDISSVPEGSFNDLV--SLSHLALGTN 427
Score = 105 (42.0 bits), Expect = 1.2e-10, Sum P(3) = 1.2e-10
Identities = 40/140 (28%), Positives = 61/140 (43%)
Query: 23 PSRCQCFDQKLEASCTDAG-LEVVPI-QLNPEVQTIILRENRISNVHY-TLSFYIELRSL 79
PS + L + D LE + + + P ++ I L N+I + T ++ L
Sbjct: 97 PSHLPEYTTDLRLNDNDISVLEAIGLFKKLPNLRKINLSNNKIKEIREGTFDGASGVQEL 156
Query: 80 DLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINK 139
L+ N++ + F L L + N IS ++ DTF GL ++ L L N IS I
Sbjct: 157 ILTENQLESVHGRMFRGLTGLKTLMLRSNSISCINNDTFAGLSSVRLLSLYDNHISTITP 216
Query: 140 TAFRDTLHLE---LLILSFN 156
AF + L LL SFN
Sbjct: 217 GAFSTLVSLSTINLLANSFN 236
Score = 93 (37.8 bits), Expect = 2.0e-09, Sum P(3) = 2.0e-09
Identities = 34/133 (25%), Positives = 53/133 (39%)
Query: 151 LILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIE 210
L L+ N+I+ E +F L +LR + L NN+I ++ + L L EN +E
Sbjct: 107 LRLNDNDISVLEAIGLFKKLPNLRKINLSNNKIKEIREGTFDGA--SGVQELILTENQLE 164
Query: 211 TVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLS 270
+V F LT L TL L L ++ I S L
Sbjct: 165 SVHGRMFR-GLTGLKTLMLRSNSISCINNDTFAGLSSVRLLSLYDNHISTITPGAFSTLV 223
Query: 271 ALVNLDLSGNNFS 283
+L ++L N+F+
Sbjct: 224 SLSTINLLANSFN 236
Score = 63 (27.2 bits), Expect = 3.4e-09, Sum P(3) = 3.4e-09
Identities = 28/110 (25%), Positives = 44/110 (40%)
Query: 171 KSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALX 230
K + L L+ N + VP LS H +L + L+ N I + + +F +T L TL L
Sbjct: 322 KDVTELYLEGNHLTAVPKG-LSAFRHLTL--IDLSNNSISVLANYTFS-NMTQLSTLILS 377
Query: 231 XXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGN 280
LR+L ++P + L +L +L L N
Sbjct: 378 YNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLVSLSHLALGTN 427
Score = 53 (23.7 bits), Expect = 3.4e-08, Sum P(3) = 3.4e-08
Identities = 14/45 (31%), Positives = 22/45 (48%)
Query: 261 IPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIP 305
IP + L +L L L GN+ S++ +F L SL + + P
Sbjct: 384 IPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLVSLSHLALGTNP 428
Score = 48 (22.0 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 260 AIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSL 296
A+P K LS L +DLS N+ S + + F ++ L
Sbjct: 336 AVP-KGLSAFRHLTLIDLSNNSISVLANYTFSNMTQL 371
Score = 48 (22.0 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 28/149 (18%), Positives = 60/149 (40%)
Query: 390 LETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFPLERISFLDLSDNPLH 449
+++V+ N L+ +P + + T L L+GN L+ + ++ +DLS+N +
Sbjct: 302 VDSVVRCSNKGLRVMPKGIPKDVTELY---LEGNHLTAVPKGLSAFRHLTLIDLSNNSIS 358
Query: 450 CDCNXXXXXXXXXXXXKSTMETTTVAYEMTSNTSISPGTTTEAQRVDRIIKNNHSLTIVL 509
N + + T ++Y + + RV + N+ +
Sbjct: 359 VLANYTFSNM-------TQLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGND------I 405
Query: 510 NNLKCSSPPDIKGLEVKAVPENSVHCESN 538
+++ S D+ L A+ N +HC+ N
Sbjct: 406 SSVPEGSFNDLVSLSHLALGTNPLHCDCN 434
Score = 46 (21.3 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 507 IVLNNLKCSSPPDIKGLEVKAVPENSVHCESN 538
IV N +C P +K + ++ V CE N
Sbjct: 253 IVSGNPRCLKPFFLKDIPIQDVDAQDFTCEGN 284
Score = 44 (20.5 bits), Expect = 3.4e-16, Sum P(3) = 3.4e-16
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 496 DRIIKNNHSLTIVLNNLKCSSPPDIKG 522
D +NN + +NN C PP+ G
Sbjct: 572 DNDCENNSTCVDGINNYVCLCPPNYTG 598
>UNIPROTKB|F1LN28 [details] [associations]
symbol:Slit2 "Slit homolog 2 protein" species:10116 "Rattus
norvegicus" [GO:0004963 "follicle-stimulating hormone receptor
activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001611 InterPro:IPR002272 PRINTS:PR01143
PROSITE:PS51450 RGD:69310 GO:GO:0016021 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0042699
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0004963
Pfam:PF01463 IPI:IPI00951919 Ensembl:ENSRNOT00000065056
ArrayExpress:F1LN28 Uniprot:F1LN28
Length = 680
Score = 181 (68.8 bits), Expect = 7.0e-16, Sum P(3) = 7.0e-16
Identities = 53/164 (32%), Positives = 83/164 (50%)
Query: 22 CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHY-TLSFYIELRSLD 80
CP C C + ++ C GL +P L + I L +N I + S Y +LR LD
Sbjct: 191 CPIACTCSNNIVD--CRGKGLTEIPTNLPETITEIRLEQNSIRVIPPGAFSPYKKLRRLD 248
Query: 81 LSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKT 140
LS N+I+ L F+ L +L + N+I+ L K F+GL L+ L L+ NKI+ +
Sbjct: 249 LSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVD 308
Query: 141 AFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQIL 184
AF+D +L LL L N + FS+L++++ + L N +
Sbjct: 309 AFQDLHNLNLLSLYDNKLQTVAKGT-FSALRAIQTMHLAQNPFI 351
Score = 162 (62.1 bits), Expect = 1.1e-15, Sum P(4) = 1.1e-15
Identities = 43/125 (34%), Positives = 65/125 (52%)
Query: 60 ENRISNVHY-TLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTF 118
EN+IS + EL L L+ N + + F KL L++S N+I A+ + F
Sbjct: 2 ENKISTIERGAFQDLKELERLRLNRNNLQLFPELLFLGTAKLYRLDLSENQIQAIPRKAF 61
Query: 119 KGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKL 178
+G ++K L L YN+IS I AFR LE+L L+ NNIT + F+ + LR +L
Sbjct: 62 RGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLSVAS-FNHMPKLRTFRL 120
Query: 179 DNNQI 183
+N +
Sbjct: 121 HSNNL 125
Score = 162 (62.1 bits), Expect = 9.1e-14, Sum P(3) = 9.1e-14
Identities = 46/151 (30%), Positives = 76/151 (50%)
Query: 76 LRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKIS 135
+ + L N I V+ F KL L++S N+IS L+ D F+GL+ L +L L NKI+
Sbjct: 220 ITEIRLEQNSIRVIPPGAFSPYKKLRRLDLSNNQISELAPDAFQGLRSLNSLVLYGNKIT 279
Query: 136 VINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLP 195
+ K+ F L+LL+L+ N I + F L +L +L L +N++ V S L
Sbjct: 280 ELPKSLFEGLFSLQLLLLNANKINCLR-VDAFQDLHNLNLLSLYDNKLQTVAKGTFSAL- 337
Query: 196 HQSLHYLYLNENLIETVLDNSFPFTLTNLHT 226
+++ ++L +N + D + LHT
Sbjct: 338 -RAIQTMHLAQNPF--ICDCHLKWLADYLHT 365
Score = 151 (58.2 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 46/159 (28%), Positives = 73/159 (45%)
Query: 22 CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSF--YIELRSL 79
CP +C+C + C++ L +P + + L N + + T F +LR +
Sbjct: 416 CPEKCRC--EGTTVDCSNQKLNKIPDHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKI 473
Query: 80 DLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINK 139
+LS NKI + FE + + + ++ N + + FKGL+ LKTL L N+IS +
Sbjct: 474 NLSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRISCVGN 533
Query: 140 TAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKL 178
+F + LL L N IT F +L SL L L
Sbjct: 534 DSFTGLGSVRLLSLYDNQITTVAPGA-FGTLHSLSTLNL 571
Score = 142 (55.0 bits), Expect = 1.9e-13, Sum P(4) = 1.9e-13
Identities = 39/125 (31%), Positives = 64/125 (51%)
Query: 84 NKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFR 143
NKI+ + F+ +L L ++ N + + F G +L LDLS N+I I + AFR
Sbjct: 3 NKISTIERGAFQDLKELERLRLNRNNLQLFPELLFLGTAKLYRLDLSENQIQAIPRKAFR 62
Query: 144 DTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLY 203
+ ++ L L +N I+ ED F +L+ L +L L+NN I + +++P L+
Sbjct: 63 GAVDIKNLQLDYNQISCIEDGA-FRALRDLEVLTLNNNNITRLSVASFNHMPKLRTFRLH 121
Query: 204 LNENL 208
N NL
Sbjct: 122 SN-NL 125
Score = 113 (44.8 bits), Expect = 6.9e-15, Sum P(3) = 6.9e-15
Identities = 37/116 (31%), Positives = 53/116 (45%)
Query: 340 KCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINEN 398
K RLDLS N S + AF+ L SL + L N + + + F L+ +++N N
Sbjct: 243 KLRRLDLSNNQISELAPDAFQGLRSLN--SLVLYGNKITELPKSLFEGLFSLQLLLLNAN 300
Query: 399 MNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPLHCDCN 453
+ L FQ NL +SL N L + F L I + L+ NP CDC+
Sbjct: 301 -KINCLRVDAFQDLHNLNLLSLYDNKLQTVAKGTFSALRAIQTMHLAQNPFICDCH 355
Score = 102 (41.0 bits), Expect = 7.0e-16, Sum P(3) = 7.0e-16
Identities = 32/108 (29%), Positives = 57/108 (52%)
Query: 344 LDLSGNNFSNIDSVA-FKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNL 401
L L+ N F+ +++ FK L L+ KINL N + I++ AF + +++ N L
Sbjct: 448 LRLNNNEFTVLEATGIFKKLPQLR--KINLSNNKITDIEEGAFEGASGVNEILLTSN-RL 504
Query: 402 KQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPL 448
+ + K+F+G +LK++ L+ N +S + F L + L L DN +
Sbjct: 505 ENVQHKMFKGLESLKTLMLRSNRISCVGNDSFTGLGSVRLLSLYDNQI 552
Score = 98 (39.6 bits), Expect = 2.9e-15, Sum P(4) = 2.9e-15
Identities = 28/113 (24%), Positives = 60/113 (53%)
Query: 343 RLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNL 401
+++LS N ++I+ AF+ + +I L N L+++ + F L+T+++ N +
Sbjct: 472 KINLSNNKITDIEEGAFEGASGVN--EILLTSNRLENVQHKMFKGLESLKTLMLRSN-RI 528
Query: 402 KQLPSKLFQGNTNLKSVSLKGNSLSHLEASHF-PLERISFLDLSDNPLHCDCN 453
+ + F G +++ +SL N ++ + F L +S L+L NP +C+C+
Sbjct: 529 SCVGNDSFTGLGSVRLLSLYDNQITTVAPGAFGTLHSLSTLNLLANPFNCNCH 581
Score = 69 (29.3 bits), Expect = 2.0e-10, Sum P(3) = 2.0e-10
Identities = 25/86 (29%), Positives = 42/86 (48%)
Query: 367 LVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSL 425
+ +I L N + I AF +L + ++ N + +L FQG +L S+ L GN +
Sbjct: 220 ITEIRLEQNSIRVIPPGAFSPYKKLRRLDLSNNQ-ISELAPDAFQGLRSLNSLVLYGNKI 278
Query: 426 SHLEASHFP-LERISFLDLSDNPLHC 450
+ L S F L + L L+ N ++C
Sbjct: 279 TELPKSLFEGLFSLQLLLLNANKINC 304
Score = 63 (27.2 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 25/97 (25%), Positives = 37/97 (38%)
Query: 206 ENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQ 265
EN I T+ +F L L L L + L+ AIP K
Sbjct: 2 ENKISTIERGAFQ-DLKELERLRLNRNNLQLFPELLFLGTAKLYRLDLSENQIQAIPRKA 60
Query: 266 LSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
+ NL L N S I+ AF++L L+++ +N
Sbjct: 61 FRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLN 97
Score = 60 (26.2 bits), Expect = 4.4e-11, Sum P(4) = 4.4e-11
Identities = 21/87 (24%), Positives = 40/87 (45%)
Query: 337 GTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFVDNIQLETVIIN 396
G + L L GN + + F+ LFSL+L+ +N ++ + AF D L + +
Sbjct: 264 GLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNA-NKINCLRVDAFQDLHNLNLLSLY 322
Query: 397 ENMNLKQLPSKLFQGNTNLKSVSLKGN 423
+N L+ + F ++++ L N
Sbjct: 323 DN-KLQTVAKGTFSALRAIQTMHLAQN 348
Score = 57 (25.1 bits), Expect = 1.1e-15, Sum P(4) = 1.1e-15
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 269 LSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
L +L +L L GN + + F+ LFSL+L+ +N
Sbjct: 265 LRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLN 298
Score = 53 (23.7 bits), Expect = 2.9e-15, Sum P(4) = 2.9e-15
Identities = 15/36 (41%), Positives = 17/36 (47%)
Query: 261 IPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSL 296
IP S L LDLS N S + AF+ L SL
Sbjct: 233 IPPGAFSPYKKLRRLDLSNNQISELAPDAFQGLRSL 268
Score = 51 (23.0 bits), Expect = 1.1e-10, Sum P(3) = 1.1e-10
Identities = 27/115 (23%), Positives = 48/115 (41%)
Query: 268 KLSALVNLDLSGNNFSNIDSVAFKSLFSLK--LVKINLIPNLD-----SIDQXXXXXXXX 320
KL L ++LS N ++I+ AF+ + L+ N + N+ ++
Sbjct: 466 KLPQLRKINLSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRS 525
Query: 321 XXXXXXXXXAFSLTPLGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN 375
+F T LG+++ L L N + + AF +L SL +NL+ N
Sbjct: 526 NRISCVGNDSF--TGLGSVRL--LSLYDNQITTVAPGAFGTLHSLST--LNLLAN 574
Score = 38 (18.4 bits), Expect = 7.0e-16, Sum P(3) = 7.0e-16
Identities = 8/30 (26%), Positives = 14/30 (46%)
Query: 507 IVLNNLKCSSPPDIKGLEVKAVPENSVHCE 536
IV N +C P +K + ++ V C+
Sbjct: 594 IVTGNPRCQKPYFLKEIPIQDVAIQDFTCD 623
Score = 38 (18.4 bits), Expect = 1.1e-10, Sum P(3) = 1.1e-10
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 390 LETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLS 426
L+TV+ N LK LP + + T L L GN +
Sbjct: 644 LDTVVRCSNKGLKVLPKGIPRDVTELY---LDGNQFT 677
>UNIPROTKB|Q86VH4 [details] [associations]
symbol:LRRTM4 "Leucine-rich repeat transmembrane neuronal
protein 4" species:9606 "Homo sapiens" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 SMART:SM00013 HOGENOM:HOG000290681
HOVERGEN:HBG052362 EMBL:AY182030 EMBL:AY358324 EMBL:BC099738
EMBL:BC110058 IPI:IPI00465323 IPI:IPI00884323 RefSeq:NP_001128217.1
RefSeq:NP_079269.4 UniGene:Hs.285782 ProteinModelPortal:Q86VH4
SMR:Q86VH4 STRING:Q86VH4 PhosphoSite:Q86VH4 DMDM:166897996
PaxDb:Q86VH4 PRIDE:Q86VH4 Ensembl:ENST00000409088
Ensembl:ENST00000409093 Ensembl:ENST00000409884 GeneID:80059
KEGG:hsa:80059 UCSC:uc002snq.3 UCSC:uc002sns.2 CTD:80059
GeneCards:GC02M076974 HGNC:HGNC:19411 MIM:610870 neXtProt:NX_Q86VH4
PharmGKB:PA134972631 ChiTaRS:LRRTM4 GenomeRNAi:80059 NextBio:70258
ArrayExpress:Q86VH4 Bgee:Q86VH4 CleanEx:HS_LRRTM4
Genevestigator:Q86VH4 Uniprot:Q86VH4
Length = 590
Score = 229 (85.7 bits), Expect = 7.8e-16, P = 7.8e-16
Identities = 76/237 (32%), Positives = 114/237 (48%)
Query: 77 RSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISV 136
+ L L N I L S+ F N+L+ L + +N IS++ +D F+G++ LK L LS NKI+
Sbjct: 64 QGLSLRFNSIQKLKSNQFAGLNQLIWLYLDHNYISSVDEDAFQGIRRLKELILSSNKITY 123
Query: 137 INKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPH 196
++ F +L L LS+N + + SE F L+ L IL L +N + VP V +
Sbjct: 124 LHNKTFHPVPNLRNLDLSYNKLQTLQ-SEQFKGLRKLIILHLRSNSLKTVPIRVFQDC-- 180
Query: 197 QSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXX 256
++L +L L N + ++ N+F L L L L L L
Sbjct: 181 RNLDFLDLGYNRLRSLSRNAFA-GLLKLKELHLEHNQFSKINFAHFPRLFNLRSIYLQWN 239
Query: 257 XXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQ 312
+I S+L NLDLSGN+ I+ FK L +L+ K+NL N L +I Q
Sbjct: 240 RIRSISQGLTWTWSSLHNLDLSGNDIQGIEPGTFKCLPNLQ--KLNLDSNKLTNISQ 294
Score = 199 (75.1 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 77/299 (25%), Positives = 121/299 (40%)
Query: 10 LILALTKLNKAICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYT 69
L++ LT +A CP C+C D K+ C +P ++ Q + LR N I +
Sbjct: 23 LLVMLTGAQRA-CPKNCRC-DGKI-VYCESHAFADIPENISGGSQGLSLRFNSIQKLKSN 79
Query: 70 -LSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLD 128
+ +L L L N I+ + F+ +L L +S N+I+ L TF + L+ LD
Sbjct: 80 QFAGLNQLIWLYLDHNYISSVDEDAFQGIRRLKELILSSNKITYLHNKTFHPVPNLRNLD 139
Query: 129 LSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPN 188
LSYNK+ + F+ L +L L N++ +F ++L L L N++ +
Sbjct: 140 LSYNKLQTLQSEQFKGLRKLIILHLRSNSLKTVP-IRVFQDCRNLDFLDLGYNRLRSLSR 198
Query: 189 NVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTL 248
N + L L L+L N + FP L NL ++ L T +L
Sbjct: 199 NAFAGL--LKLKELHLEHNQFSKINFAHFP-RLFNLRSIYLQWNRIRSISQGLTWTWSSL 255
Query: 249 HXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNL 307
H I L L L+L N +NI + SL + I L N+
Sbjct: 256 HNLDLSGNDIQGIEPGTFKCLPNLQKLNLDSNKLTNISQETVNAWISL--ISITLSGNM 312
>UNIPROTKB|O15335 [details] [associations]
symbol:CHAD "Chondroadherin" species:9606 "Homo sapiens"
[GO:0001502 "cartilage condensation" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=TAS] [GO:0005201
"extracellular matrix structural constituent" evidence=NAS]
[GO:0001558 "regulation of cell growth" evidence=NAS] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0001558 GO:GO:0005578
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 EMBL:CH471109 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0001502 GO:GO:0005201 CTD:1101
HOGENOM:HOG000013150 HOVERGEN:HBG005324 KO:K06248 EMBL:U96769
EMBL:U96767 EMBL:U96768 EMBL:AF371328 EMBL:AK292177 EMBL:BC036360
EMBL:BC073974 IPI:IPI00014592 RefSeq:NP_001258.2 UniGene:Hs.97220
ProteinModelPortal:O15335 SMR:O15335 STRING:O15335 PRIDE:O15335
Ensembl:ENST00000258969 Ensembl:ENST00000508540 GeneID:1101
KEGG:hsa:1101 UCSC:uc010dbr.3 GeneCards:GC17M048541 HGNC:HGNC:1909
HPA:HPA018241 MIM:602178 neXtProt:NX_O15335 PharmGKB:PA26445
InParanoid:O15335 OMA:CHCHGGD PhylomeDB:O15335 GenomeRNAi:1101
NextBio:4554 Bgee:O15335 CleanEx:HS_CHAD Genevestigator:O15335
GermOnline:ENSG00000136457 Uniprot:O15335
Length = 359
Score = 177 (67.4 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 62/242 (25%), Positives = 105/242 (43%)
Query: 79 LDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVIN 138
L+L N VL +++F L++L++ + +I ++ F+GLK+L L LS+N I V+
Sbjct: 56 LNLQRNNFPVLAANSFRAMPNLVSLHLQHCQIREVAAGAFRGLKQLIYLYLSHNDIRVLR 115
Query: 139 KTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQS 198
AF D L L L N +T + S L +L IL+L+NN+I ++ +
Sbjct: 116 AGAFDDLTELTYLYLDHNKVTELPRG-LLSPLVNLFILQLNNNKIRELRAGAFQGA--KD 172
Query: 199 LHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXX 258
L +LYL+EN + ++ + + NL + LR +
Sbjct: 173 LRWLYLSENALSSLQPGALD-DVENLAKFHVDRNQLSSYPSAALSKLRVVEELKLSHNPL 231
Query: 259 XAIPTKQLSKLSA-LVNLDLSGNNFSNIDSVAFKSLFSLKLV-----KINLIPN---LDS 309
+IP L L L N AF + +LK V ++N +P+ DS
Sbjct: 232 KSIPDNAFQSFGRYLETLWLDNTNLEKFSDGAFLGVTTLKHVHLENNRLNQLPSNFPFDS 291
Query: 310 ID 311
++
Sbjct: 292 LE 293
Score = 145 (56.1 bits), Expect = 8.2e-16, Sum P(2) = 8.2e-16
Identities = 49/194 (25%), Positives = 87/194 (44%)
Query: 20 AICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSFYI--ELR 77
A CP C C C GL+ +P +++ + + + L+ N V SF L
Sbjct: 21 AACPQNCHCHSDLQHVICDKVGLQKIP-KVSEKTKLLNLQRNNFP-VLAANSFRAMPNLV 78
Query: 78 SLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVI 137
SL L +I + + F +L+ L +S+N+I L F L EL L L +NK++ +
Sbjct: 79 SLHLQHCQIREVAAGAFRGLKQLIYLYLSHNDIRVLRAGAFDDLTELTYLYLDHNKVTEL 138
Query: 138 NKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQ 197
+ ++L +L L+ N I + F K LR L L N + + L ++ +
Sbjct: 139 PRGLLSPLVNLFILQLNNNKIRELR-AGAFQGAKDLRWLYLSENALSSLQPGALDDV--E 195
Query: 198 SLHYLYLNENLIET 211
+L +++ N + +
Sbjct: 196 NLAKFHVDRNQLSS 209
Score = 135 (52.6 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 45/155 (29%), Positives = 76/155 (49%)
Query: 75 ELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKI 134
+L L LS N I VL + F+ +L L + +N+++ L + L L L L+ NKI
Sbjct: 100 QLIYLYLSHNDIRVLRAGAFDDLTELTYLYLDHNKVTELPRGLLSPLVNLFILQLNNNKI 159
Query: 135 SVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNL 194
+ AF+ L L LS N ++ + + +++L +D NQ+ P+ LS L
Sbjct: 160 RELRAGAFQGAKDLRWLYLSENALSSLQPGAL-DDVENLAKFHVDRNQLSSYPSAALSKL 218
Query: 195 PHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLAL 229
+ + L L+ N ++++ DN+F L TL L
Sbjct: 219 --RVVEELKLSHNPLKSIPDNAFQSFGRYLETLWL 251
Score = 127 (49.8 bits), Expect = 8.2e-16, Sum P(2) = 8.2e-16
Identities = 37/105 (35%), Positives = 55/105 (52%)
Query: 349 NNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFVD-NIQLETVIINENMNLKQLPSK 407
N S+ S A L ++ +K++ P L SI AF LET+ + +N NL++
Sbjct: 205 NQLSSYPSAALSKLRVVEELKLSHNP-LKSIPDNAFQSFGRYLETLWL-DNTNLEKFSDG 262
Query: 408 LFQGNTNLKSVSLKGNSLSHLEASHFPLERISFLDLSDNPLHCDC 452
F G T LK V L+ N L+ L S+FP + + L L++NP C C
Sbjct: 263 AFLGVTTLKHVHLENNRLNQLP-SNFPFDSLETLALTNNPWKCTC 306
Score = 126 (49.4 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 46/163 (28%), Positives = 75/163 (46%)
Query: 49 LNPEVQTIILR--ENRISNVHY-TLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNI 105
L+P V IL+ N+I + +LR L LS N ++ L + L ++
Sbjct: 143 LSPLVNLFILQLNNNKIRELRAGAFQGAKDLRWLYLSENALSSLQPGALDDVENLAKFHV 202
Query: 106 SYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDT-LHLELLILSFNNITYFEDS 164
N++S+ L+ ++ L LS+N + I AF+ +LE L L N+ F D
Sbjct: 203 DRNQLSSYPSAALSKLRVVEELKLSHNPLKSIPDNAFQSFGRYLETLWLDNTNLEKFSDG 262
Query: 165 EIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNEN 207
F + +L+ + L+NN++ +P SN P SL L L N
Sbjct: 263 A-FLGVTTLKHVHLENNRLNQLP----SNFPFDSLETLALTNN 300
>UNIPROTKB|Q50LG9 [details] [associations]
symbol:LRRC24 "Leucine-rich repeat-containing protein 24"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 eggNOG:NOG255871
EMBL:AB178281 EMBL:AC084125 EMBL:BC111067 IPI:IPI00455850
RefSeq:NP_001019849.2 UniGene:Hs.459391 UniGene:Hs.740859
ProteinModelPortal:Q50LG9 SMR:Q50LG9 DMDM:296434571 PaxDb:Q50LG9
PRIDE:Q50LG9 Ensembl:ENST00000529415 GeneID:441381 KEGG:hsa:441381
UCSC:uc003zdm.3 CTD:441381 GeneCards:GC08M145747 HGNC:HGNC:28947
HPA:HPA037689 neXtProt:NX_Q50LG9 PharmGKB:PA142671520
HOGENOM:HOG000234857 HOVERGEN:HBG079563 InParanoid:Q50LG9
OMA:NITLAHA OrthoDB:EOG4DR9CG GenomeRNAi:441381 NextBio:110128
ArrayExpress:Q50LG9 Bgee:Q50LG9 CleanEx:HS_LRRC24
Genevestigator:Q50LG9 GermOnline:ENSG00000177021 Uniprot:Q50LG9
Length = 513
Score = 227 (85.0 bits), Expect = 9.4e-16, P = 9.4e-16
Identities = 65/199 (32%), Positives = 98/199 (49%)
Query: 10 LILALTKLNKAICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHY- 68
L+L L L A CP+ C+C+ +E C L VVP+ + P QT+ L++N I+ +
Sbjct: 11 LLLLLLPLRAAGCPAACRCYSATVE--CGALRLRVVPLGIPPGTQTLFLQDNNIARLEPG 68
Query: 69 TLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLD 128
L+ LR L L N + L + F Q +LL L ++ N + L F GL +L+ L
Sbjct: 69 ALAPLAALRRLYLHNNSLRALEAGAFRAQPRLLELALTSNRLRGLRSGAFVGLAQLRVLY 128
Query: 129 LSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPN 188
L+ N+++ + F L+ L L N+I ED + + L SL +L L NQ+ +
Sbjct: 129 LAGNQLARLLDFTFLHLPRLQELHLQENSIELLEDQAL-AGLSSLALLDLSRNQLGTISR 187
Query: 189 NVLSNLPHQSLHYLYLNEN 207
L P SL L L EN
Sbjct: 188 EALQ--PLASLQVLRLTEN 204
>MGI|MGI:2443198 [details] [associations]
symbol:Slitrk6 "SLIT and NTRK-like family, member 6"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0007409 "axonogenesis" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=ISS] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
MGI:MGI:2443198 GO:GO:0016021 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007409
GeneTree:ENSGT00680000099859 HOGENOM:HOG000290667
HOVERGEN:HBG056407 CTD:84189 eggNOG:NOG113965 OMA:YFELKAN
OrthoDB:EOG4X0MRT EMBL:AB097575 EMBL:AK029275 IPI:IPI00223927
RefSeq:NP_780708.1 UniGene:Mm.49728 ProteinModelPortal:Q8C110
SMR:Q8C110 STRING:Q8C110 PhosphoSite:Q8C110 PRIDE:Q8C110
Ensembl:ENSMUST00000078386 GeneID:239250 KEGG:mmu:239250
InParanoid:Q8C110 NextBio:384048 Bgee:Q8C110 CleanEx:MM_SLITRK6
Genevestigator:Q8C110 GermOnline:ENSMUSG00000045871 Uniprot:Q8C110
Length = 840
Score = 156 (60.0 bits), Expect = 1.1e-15, Sum P(3) = 1.1e-15
Identities = 40/134 (29%), Positives = 71/134 (52%)
Query: 79 LDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVIN 138
L L N + +L +++F L++++ +N I+ + F GL LK L +++N + ++
Sbjct: 69 LSLLNNGLTMLHTNDFSGLTNALSIHLGFNNIADIETGAFNGLGLLKQLHINHNSLEILK 128
Query: 139 KTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQS 198
+ F +LE L N IT E S FS L L++L L++N I +P N+ +P
Sbjct: 129 EDTFHGLENLEFLQADNNFITIIEPSA-FSKLNRLKVLILNDNAIESLPPNIFRFVP--- 184
Query: 199 LHYLYLNENLIETV 212
L +L L N ++T+
Sbjct: 185 LTHLDLRGNQLQTL 198
Score = 155 (59.6 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 56/193 (29%), Positives = 88/193 (45%)
Query: 9 FLILALTKLNKAICPSRCQC---FDQKLEASCTDAGLEVVP-IQLNPE-VQTIILRENRI 63
+L T+L CP C C L C + +E + +Q P + +IL N I
Sbjct: 315 YLTKPSTQLPVPYCPIPCNCKVLSPSGLLIHCQERNIESLSDLQPPPHNPRKLILAGNII 374
Query: 64 SNVHYT-LSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLK 122
+ + L+ Y L L L N+I VL +F +L L ++ N ++ L+K F GL
Sbjct: 375 HTLMKSDLTDYFTLEMLHLGNNRIEVLEEGSFMNLTRLQKLYLNGNHLTKLNKGMFLGLH 434
Query: 123 ELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQ 182
L+ L L YN + I F L++L L+ NN+ + IF + R+ L NQ
Sbjct: 435 SLEYLYLEYNAVKEILPGTFNPMPKLKVLYLN-NNLLQVLPAHIFLGIPLTRV-NLKTNQ 492
Query: 183 ILDVP-NNVLSNL 194
+P +N+L +L
Sbjct: 493 FTHLPVSNILDDL 505
Score = 132 (51.5 bits), Expect = 4.6e-13, Sum P(3) = 4.6e-13
Identities = 47/171 (27%), Positives = 81/171 (47%)
Query: 22 CPSRCQCFDQK--LEASCTDAGL-EVVPIQLNPEVQT-IILRENRISNVHYT-LSFYIEL 76
C + C C ++ + +C + G+ ++ I + P + L N ++ +H S
Sbjct: 31 CDTLCNCEEKDGIMIINCEEKGINKLSQISVPPSRPFHLSLLNNGLTMLHTNDFSGLTNA 90
Query: 77 RSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISV 136
S+ L N I + + F L L+I++N + L +DTF GL+ L+ L N I++
Sbjct: 91 LSIHLGFNNIADIETGAFNGLGLLKQLHINHNSLEILKEDTFHGLENLEFLQADNNFITI 150
Query: 137 INKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVP 187
I +AF L++LIL+ N I + IF + L L L NQ+ +P
Sbjct: 151 IEPSAFSKLNRLKVLILNDNAIESLPPN-IFRFVP-LTHLDLRGNQLQTLP 199
Score = 130 (50.8 bits), Expect = 7.6e-13, Sum P(3) = 7.6e-13
Identities = 38/124 (30%), Positives = 65/124 (52%)
Query: 102 NLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYF 161
+L++ N ++ L + F GL ++ L +N I+ I AF L+ L ++ N++
Sbjct: 68 HLSLLNNGLTMLHTNDFSGLTNALSIHLGFNNIADIETGAFNGLGLLKQLHINHNSLEIL 127
Query: 162 EDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFT- 220
++ + F L++L L+ DNN I + + S L L L LN+N IE++ N F F
Sbjct: 128 KE-DTFHGLENLEFLQADNNFITIIEPSAFSKL--NRLKVLILNDNAIESLPPNIFRFVP 184
Query: 221 LTNL 224
LT+L
Sbjct: 185 LTHL 188
Score = 123 (48.4 bits), Expect = 1.1e-15, Sum P(3) = 1.1e-15
Identities = 39/133 (29%), Positives = 64/133 (48%)
Query: 340 KCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFVDNIQLETVIINENM 399
+ +L L+GN+ + ++ F L SL+ + + + I F +L+ + +N N+
Sbjct: 411 RLQKLYLNGNHLTKLNKGMFLGLHSLEYLYLEYNA-VKEILPGTFNPMPKLKVLYLNNNL 469
Query: 400 NLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFPLERISFL---DLSDNPLHCDCNXXX 456
L+ LP+ +F G L V+LK N +HL S+ L+ + FL DL DNP C C+
Sbjct: 470 -LQVLPAHIFLG-IPLTRVNLKTNQFTHLPVSNI-LDDLDFLIQIDLEDNPWDCSCDLVG 526
Query: 457 XXXXXXXXXKSTM 469
K TM
Sbjct: 527 LQQWIHKLGKGTM 539
Score = 122 (48.0 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 38/127 (29%), Positives = 61/127 (48%)
Query: 103 LNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFE 162
L ++ N I L K L+ L L N+I V+ + +F + L+ L L+ N++T
Sbjct: 367 LILAGNIIHTLMKSDLTDYFTLEMLHLGNNRIEVLEEGSFMNLTRLQKLYLNGNHLTKLN 426
Query: 163 DSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSF---PF 219
+F L SL L L+ N + ++ + +P L LYLN NL++ + + F P
Sbjct: 427 KG-MFLGLHSLEYLYLEYNAVKEILPGTFNPMP--KLKVLYLNNNLLQVLPAHIFLGIPL 483
Query: 220 TLTNLHT 226
T NL T
Sbjct: 484 TRVNLKT 490
Score = 93 (37.8 bits), Expect = 4.7e-09, Sum P(3) = 4.7e-09
Identities = 41/171 (23%), Positives = 66/171 (38%)
Query: 120 GLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLD 179
G+ + + NK+S I+ R HL LL N +T ++ FS L + + L
Sbjct: 42 GIMIINCEEKGINKLSQISVPPSRP-FHLSLLN---NGLTMLHTND-FSGLTNALSIHLG 96
Query: 180 NNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXX 239
N I D+ + L L L++N N +E + +++F L NL L
Sbjct: 97 FNNIADIETGAFNGLG--LLKQLHINHNSLEILKEDTF-HGLENLEFLQADNNFITIIEP 153
Query: 240 XXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAF 290
L L ++P + + L +LDL GN + V F
Sbjct: 154 SAFSKLNRLKVLILNDNAIESLPPN-IFRFVPLTHLDLRGNQLQTLPYVGF 203
Score = 57 (25.1 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 14/40 (35%), Positives = 23/40 (57%)
Query: 263 TKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
T S L+ +++ L NN ++I++ AF L LK + IN
Sbjct: 81 TNDFSGLTNALSIHLGFNNIADIETGAFNGLGLLKQLHIN 120
Score = 53 (23.7 bits), Expect = 1.3e-08, Sum P(3) = 1.3e-08
Identities = 22/77 (28%), Positives = 32/77 (41%)
Query: 371 NLIPNLDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEA 430
N+I L D D LE + + N ++ L F T L+ + L GN L+ L
Sbjct: 372 NIIHTLMKSD---LTDYFTLEMLHLGNN-RIEVLEEGSFMNLTRLQKLYLNGNHLTKLNK 427
Query: 431 SHF-PLERISFLDLSDN 446
F L + +L L N
Sbjct: 428 GMFLGLHSLEYLYLEYN 444
Score = 46 (21.3 bits), Expect = 1.1e-15, Sum P(3) = 1.1e-15
Identities = 10/38 (26%), Positives = 20/38 (52%)
Query: 558 ILMYFIYRKRALWKNKINRNLKHQSS-YVDNCMNSHPT 594
I+++ ++R+R K K+ L+ S ++ M H T
Sbjct: 627 IVVFVLHRRRRYKKKKVEEQLRDNSPVHLQYSMYGHKT 664
Score = 41 (19.5 bits), Expect = 2.1e-07, Sum P(3) = 2.1e-07
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 269 LSALVNLDLSGNNFSNIDSVAFKSLFSLK 297
L+ L L L+GN+ + ++ F L SL+
Sbjct: 409 LTRLQKLYLNGNHLTKLNKGMFLGLHSLE 437
Score = 40 (19.1 bits), Expect = 2.7e-07, Sum P(3) = 2.7e-07
Identities = 7/25 (28%), Positives = 14/25 (56%)
Query: 508 VLNNLKCSSPPDIKGLEVKAVPENS 532
++ ++ C SPP KG + + + S
Sbjct: 241 IIGDVICYSPPPFKGSVLSRLKKES 265
>RGD|1593785 [details] [associations]
symbol:Lrrtm2 "leucine rich repeat transmembrane neuronal 2"
species:10116 "Rattus norvegicus" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0042043 "neurexin
family protein binding" evidence=IPI] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0050808 "synapse organization"
evidence=ISO;IDA] [GO:0060076 "excitatory synapse" evidence=IDA]
InterPro:IPR001611 PROSITE:PS51450 RGD:1593785 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 InterPro:IPR003591
SMART:SM00369 GO:GO:0050808 InterPro:IPR000372 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 GO:GO:0060076 EMBL:CH473974
CTD:26045 OrthoDB:EOG4PG60Z IPI:IPI00202163 RefSeq:NP_001102939.1
UniGene:Rn.218238 Ensembl:ENSRNOT00000026825 GeneID:685472
KEGG:rno:685472 UCSC:RGD:1593785 NextBio:729781 Uniprot:D4A7P2
Length = 515
Score = 226 (84.6 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 71/236 (30%), Positives = 115/236 (48%)
Query: 78 SLDLSV--NKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKIS 135
SL LS+ N I L F ++L L++ +N+IS + +D F+GL +LK L LS NKI
Sbjct: 63 SLGLSLRHNHITALERDQFASFSQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIF 122
Query: 136 VINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLP 195
+ T F ++L+ L LSFN ++ E+F L+ L+ L L +N + +P + +
Sbjct: 123 YLPNTTFTQLINLQNLDLSFNQLSSLHP-ELFYGLRKLQTLHLRSNSLRTIPVRLFWDC- 180
Query: 196 HQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXX 255
+SL +L L+ N + ++ N F L L L L + L +LH
Sbjct: 181 -RSLEFLDLSTNRLRSLARNGFA-GLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQW 238
Query: 256 XXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKI--NLIPNLDS 309
+ S L LDL+GN ID F+++ +LK++ + N + +LDS
Sbjct: 239 NKISNLTCGMEWTWSTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNNKLNSLDS 294
Score = 211 (79.3 bits), Expect = 5.6e-14, P = 5.6e-14
Identities = 80/302 (26%), Positives = 130/302 (43%)
Query: 5 LTCIFLILALTKLNKAI---CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILREN 61
L I+ + + K+ A+ CP +C+C +KL C G VP + + LR N
Sbjct: 14 LAAIYAMSVVLKMLPALGMACPPKCRC--EKLLFYCDSQGFHSVPNATDKGSLGLSLRHN 71
Query: 62 RISNVHYT-LSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKG 120
I+ + + + +L L L N+I+ + F+ KL L +S N+I L TF
Sbjct: 72 HITALERDQFASFSQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLPNTTFTQ 131
Query: 121 LKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDN 180
L L+ LDLS+N++S ++ F L+ L L N++ +F +SL L L
Sbjct: 132 LINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIP-VRLFWDCRSLEFLDLST 190
Query: 181 NQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXX 240
N++ + N + L L L+L N + T ++ + L++LHTL L
Sbjct: 191 NRLRSLARNGFAGLI--KLRELHLEHNQL-TKINFAHFLRLSSLHTLFLQWNKISNLTCG 247
Query: 241 XXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVK 300
T TL AI + L L + N +++DS SL SL V
Sbjct: 248 MEWTWSTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNNKLNSLDSKILSSLRSLTTVG 307
Query: 301 IN 302
++
Sbjct: 308 LS 309
Score = 205 (77.2 bits), Expect = 2.6e-13, P = 2.6e-13
Identities = 71/224 (31%), Positives = 102/224 (45%)
Query: 58 LRENRISNVHY-TLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKD 116
L N+IS V +L+ L LS NKI L + F L NL++S+N++S+L +
Sbjct: 92 LDHNQISTVKEDAFQGLYKLKELILSSNKIFYLPNTTFTQLINLQNLDLSFNQLSSLHPE 151
Query: 117 TFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRIL 176
F GL++L+TL L N + I F D LE L LS N + + F+ L LR L
Sbjct: 152 LFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEFLDLSTNRLRSLARNG-FAGLIKLREL 210
Query: 177 KLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXX 236
L++NQ+ + N L SLH L+L N I L +T + L L L
Sbjct: 211 HLEHNQLTKI--NFAHFLRLSSLHTLFLQWNKISN-LTCGMEWTWSTLEKLDLTGNEIKA 267
Query: 237 XXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGN 280
T+ L ++ +K LS L +L + LSGN
Sbjct: 268 IDLTVFETMPNLKILLMDNNKLNSLDSKILSSLRSLTTVGLSGN 311
Score = 136 (52.9 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 66/254 (25%), Positives = 101/254 (39%)
Query: 151 LILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIE 210
L L N+IT E + F+S L L LD+NQI V + L L L L+ N I
Sbjct: 66 LSLRHNHITALERDQ-FASFSQLTWLHLDHNQISTVKEDAFQGL--YKLKELILSSNKIF 122
Query: 211 TVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLS 270
+ + +F L NL L L LR L IP +
Sbjct: 123 YLPNTTFT-QLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCR 181
Query: 271 ALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQXXXXXXXXXXXXXXXXX 329
+L LDLS N ++ F L +KL +++L N L I+
Sbjct: 182 SLEFLDLSTNRLRSLARNGFAGL--IKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWN 239
Query: 330 AFSLTPLGT----LKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFV 385
S G ++LDL+GN ID F+++ +LK++ ++ L+S+D +
Sbjct: 240 KISNLTCGMEWTWSTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDN-NKLNSLDSKILS 298
Query: 386 DNIQLETVIINENM 399
L TV ++ N+
Sbjct: 299 SLRSLTTVGLSGNL 312
>WB|WBGene00003915 [details] [associations]
symbol:pan-1 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0018996 "molting cycle, collagen and cuticulin-based cuticle"
evidence=IMP] InterPro:IPR001611 PROSITE:PS51450 GO:GO:0040007
GO:GO:0002119 GO:GO:0018996 InterPro:IPR003591 SMART:SM00369
GO:GO:0040011 InterPro:IPR025875 Pfam:PF12799 HSSP:P25147
EMBL:Z34802 GeneTree:ENSGT00700000104056 GeneID:175596
KEGG:cel:CELE_M88.6 UCSC:M88.6b CTD:175596 HOGENOM:HOG000021363
NextBio:888834 PIR:T23841 RefSeq:NP_497925.1
ProteinModelPortal:Q9U3A0 SMR:Q9U3A0 PRIDE:Q9U3A0
EnsemblMetazoa:M88.6b WormBase:M88.6b ArrayExpress:Q9U3A0
Uniprot:Q9U3A0
Length = 594
Score = 227 (85.0 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 69/183 (37%), Positives = 100/183 (54%)
Query: 32 KLEASCTDAGLEVVPIQ-LNPEVQTIILRENRISNVHYTLSFYIE-LRSLDLSVNKINVL 89
KLE C + L+ Q L + + LRENRI + L ++ L++LDL++NKI +
Sbjct: 108 KLER-CGLSTLQPNSFQSLGGSAELLSLRENRIKKLEKGLFTGLKSLKTLDLAMNKIQEI 166
Query: 90 GSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLE 149
FE K+ L ++ N+I L TF G+K LK L L + +I K AFR LE
Sbjct: 167 DVGAFEELKKVEELLLNENDIRVLKTGTFDGMKNLKKLTLQNCNLEIIQKGAFRGLNSLE 226
Query: 150 LLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLI 209
LILS NN+ D IFS+LK+LR+L L +N+I +V + + P L L LN N I
Sbjct: 227 QLILSNNNLENI-DWTIFSALKNLRVLDLGSNKISNVE---MKSFP--KLEKLVLNNNTI 280
Query: 210 ETV 212
+++
Sbjct: 281 DSM 283
Score = 162 (62.1 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 76/271 (28%), Positives = 119/271 (43%)
Query: 53 VQTIILRENRISNVHYTLSFYIELRSLD---LSVNKINVLGSHNFEYQNKLLNLNISYNE 109
++T+ L N+I + + + EL+ ++ L+ N I VL + F+ L L +
Sbjct: 153 LKTLDLAMNKIQEID--VGAFEELKKVEELLLNENDIRVLKTGTFDGMKNLKKLTLQNCN 210
Query: 110 ISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSS 169
+ + K F+GL L+ L LS N + I+ T F +L +L L N I+ E S
Sbjct: 211 LEIIQKGAFRGLNSLEQLILSNNNLENIDWTIFSALKNLRVLDLGSNKISNVE----MKS 266
Query: 170 LKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLD-NSFPFTLTN-LHTL 227
L L L+NN I + + L +LP SL + N IE++ D + F T ++ + TL
Sbjct: 267 FPKLEKLVLNNNTIDSMKSIKLKDLP--SLVVALFDRNKIESIGDMDMFGLTRSDRIETL 324
Query: 228 ALXXXXXXXXXXXXX------VTLRTLHXXXXXXXXXXA--IPTKQLSKLSALVNLDLSG 279
+L +TL + + T L+ L LV L LS
Sbjct: 325 SLARNNLSQISPKAFQHTPNLITLLLQYNQIEELSSHSPSQVRTPFLASLKKLVTLQLSS 384
Query: 280 NNFSNIDSVAF-KSLFSLKLVKINLIPNLDS 309
NN S I S KSL SL L N+I +++
Sbjct: 385 NNLSVIRSDELPKSLSSLALDH-NVISKIEA 414
Score = 149 (57.5 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 94/398 (23%), Positives = 160/398 (40%)
Query: 75 ELRSLDLSVNKINVLGSHNFEYQNKLLN-LNISYNEISALSKDTFKGLK-ELKTLDLSYN 132
EL L + + +NVL FE N + + +S L ++F+ L + L L N
Sbjct: 80 ELGRLTIRDSTVNVLPQDLFE--NVFAKQVKLERCGLSTLQPNSFQSLGGSAELLSLREN 137
Query: 133 KISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLS 192
+I + K F L+ L L+ N I D F LK + L L+ N I +
Sbjct: 138 RIKKLEKGLFTGLKSLKTLDLAMNKIQEI-DVGAFEELKKVEELLLNENDIRVLKTGTFD 196
Query: 193 NLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXX 252
+ ++L L L +E + +F L +L L L L+ L
Sbjct: 197 GM--KNLKKLTLQNCNLEIIQKGAFR-GLNSLEQLILSNNNLENIDWTIFSALKNLRVLD 253
Query: 253 XXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLV-----KINLIPNL 307
+ K KL LV L+ N ++ S+ K L SL + KI I ++
Sbjct: 254 LGSNKISNVEMKSFPKLEKLV---LNNNTIDSMKSIKLKDLPSLVVALFDRNKIESIGDM 310
Query: 308 DSI-----DQXXXXXXXXXXXXXXXXXAFSLTP-LGTL--KCDRLD-LSGNNFSNIDSVA 358
D D+ AF TP L TL + ++++ LS ++ S + +
Sbjct: 311 DMFGLTRSDRIETLSLARNNLSQISPKAFQHTPNLITLLLQYNQIEELSSHSPSQVRTPF 370
Query: 359 FKSLFSLKLVKINLIPNLDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSV 418
SL KLV + L N S+ + + L ++ ++ N+ + ++ ++ +G +K +
Sbjct: 371 LASL--KKLVTLQLSSNNLSVIRSDELPK-SLSSLALDHNV-ISKIEARALEG-MEIKRL 425
Query: 419 SLKGNSLSHLEASHFPL---ERISFLDLSDNPLHCDCN 453
L N L++L F + + +D+S NP C CN
Sbjct: 426 YLHSNKLNYLYQGTFDSFSPKSVEAVDVSLNPWVCVCN 463
>MGI|MGI:2389174 [details] [associations]
symbol:Lrrtm2 "leucine rich repeat transmembrane neuronal 2"
species:10090 "Mus musculus" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=ISS] [GO:0030054 "cell junction"
evidence=IEA] [GO:0042043 "neurexin family protein binding"
evidence=ISO] [GO:0045202 "synapse" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0050808 "synapse
organization" evidence=IGI;ISO] [GO:0060076 "excitatory synapse"
evidence=ISO] InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:2389174
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0050808
InterPro:IPR000372 SMART:SM00013 InterPro:IPR025875 Pfam:PF12799
GeneTree:ENSGT00700000104056 HOGENOM:HOG000290681
HOVERGEN:HBG052362 CTD:26045 OMA:IRQCSMI OrthoDB:EOG4PG60Z
EMBL:AY182027 EMBL:AK043173 EMBL:AK043784 EMBL:AK044705
EMBL:AK046818 EMBL:AK049920 EMBL:AK122278 IPI:IPI00313492
RefSeq:NP_821072.1 UniGene:Mm.39900 ProteinModelPortal:Q8BGA3
SMR:Q8BGA3 STRING:Q8BGA3 PhosphoSite:Q8BGA3 PaxDb:Q8BGA3
PRIDE:Q8BGA3 DNASU:107065 Ensembl:ENSMUST00000091636 GeneID:107065
KEGG:mmu:107065 UCSC:uc008ema.1 InParanoid:Q8BGA3 NextBio:358560
Bgee:Q8BGA3 CleanEx:MM_LRRTM2 Genevestigator:Q8BGA3
GermOnline:ENSMUSG00000071862 Uniprot:Q8BGA3
Length = 515
Score = 225 (84.3 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 71/236 (30%), Positives = 115/236 (48%)
Query: 78 SLDLSV--NKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKIS 135
SL LS+ N I L F ++L L++ +N+IS + +D F+GL +LK L LS NKI
Sbjct: 63 SLGLSLRHNHITALERDQFASFSQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIF 122
Query: 136 VINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLP 195
+ T F ++L+ L LSFN ++ E+F L+ L+ L L +N + +P + +
Sbjct: 123 YLPNTTFTQLINLQNLDLSFNQLSSLHP-ELFYGLRKLQTLHLRSNSLRTIPVRLFWDC- 180
Query: 196 HQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXX 255
+SL +L L+ N + ++ N F L L L L + L +LH
Sbjct: 181 -RSLEFLDLSTNRLRSLARNGFA-GLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQW 238
Query: 256 XXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKI--NLIPNLDS 309
+ S L LDL+GN ID F+++ +LK++ + N + +LDS
Sbjct: 239 NKISNLTCGMDWTWSTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNNKLNSLDS 294
Score = 211 (79.3 bits), Expect = 5.6e-14, P = 5.6e-14
Identities = 80/302 (26%), Positives = 130/302 (43%)
Query: 5 LTCIFLILALTKLNKAI---CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILREN 61
L I+ + + K+ A+ CP +C+C +KL C G VP + + LR N
Sbjct: 14 LAAIYAMSVVLKMLPALGMACPPKCRC--EKLLFYCDSQGFHSVPNATDKGSLGLSLRHN 71
Query: 62 RISNVHYT-LSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKG 120
I+ + + + +L L L N+I+ + F+ KL L +S N+I L TF
Sbjct: 72 HITALERDQFASFSQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLPNTTFTQ 131
Query: 121 LKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDN 180
L L+ LDLS+N++S ++ F L+ L L N++ +F +SL L L
Sbjct: 132 LINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIP-VRLFWDCRSLEFLDLST 190
Query: 181 NQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXX 240
N++ + N + L L L+L N + T ++ + L++LHTL L
Sbjct: 191 NRLRSLARNGFAGLI--KLRELHLEHNQL-TKINFAHFLRLSSLHTLFLQWNKISNLTCG 247
Query: 241 XXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVK 300
T TL AI + L L + N +++DS SL SL V
Sbjct: 248 MDWTWSTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNNKLNSLDSKILNSLKSLTTVG 307
Query: 301 IN 302
++
Sbjct: 308 LS 309
Score = 203 (76.5 bits), Expect = 4.3e-13, P = 4.3e-13
Identities = 70/224 (31%), Positives = 102/224 (45%)
Query: 58 LRENRISNVHY-TLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKD 116
L N+IS V +L+ L LS NKI L + F L NL++S+N++S+L +
Sbjct: 92 LDHNQISTVKEDAFQGLYKLKELILSSNKIFYLPNTTFTQLINLQNLDLSFNQLSSLHPE 151
Query: 117 TFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRIL 176
F GL++L+TL L N + I F D LE L LS N + + F+ L LR L
Sbjct: 152 LFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEFLDLSTNRLRSLARNG-FAGLIKLREL 210
Query: 177 KLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXX 236
L++NQ+ + N L SLH L+L N I L +T + L L L
Sbjct: 211 HLEHNQLTKI--NFAHFLRLSSLHTLFLQWNKISN-LTCGMDWTWSTLEKLDLTGNEIKA 267
Query: 237 XXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGN 280
T+ L ++ +K L+ L +L + LSGN
Sbjct: 268 IDLTVFETMPNLKILLMDNNKLNSLDSKILNSLKSLTTVGLSGN 311
Score = 135 (52.6 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 66/254 (25%), Positives = 101/254 (39%)
Query: 151 LILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIE 210
L L N+IT E + F+S L L LD+NQI V + L L L L+ N I
Sbjct: 66 LSLRHNHITALERDQ-FASFSQLTWLHLDHNQISTVKEDAFQGL--YKLKELILSSNKIF 122
Query: 211 TVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLS 270
+ + +F L NL L L LR L IP +
Sbjct: 123 YLPNTTFT-QLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCR 181
Query: 271 ALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQXXXXXXXXXXXXXXXXX 329
+L LDLS N ++ F L +KL +++L N L I+
Sbjct: 182 SLEFLDLSTNRLRSLARNGFAGL--IKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWN 239
Query: 330 AFSLTPLGT----LKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFV 385
S G ++LDL+GN ID F+++ +LK++ ++ L+S+D +
Sbjct: 240 KISNLTCGMDWTWSTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDN-NKLNSLDSKILN 298
Query: 386 DNIQLETVIINENM 399
L TV ++ N+
Sbjct: 299 SLKSLTTVGLSGNL 312
>FB|FBgn0052055 [details] [associations]
symbol:CG32055 species:7227 "Drosophila melanogaster"
[GO:0016942 "insulin-like growth factor binding protein complex"
evidence=ISS] [GO:0005520 "insulin-like growth factor binding"
evidence=ISS] InterPro:IPR001611 PROSITE:PS51450 EMBL:AE014296
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
GeneTree:ENSGT00690000101816 HSSP:Q9BZR6 InterPro:IPR026906
Pfam:PF13306 RefSeq:NP_729599.1 UniGene:Dm.27841
ProteinModelPortal:Q9VT89 SMR:Q9VT89 IntAct:Q9VT89 MINT:MINT-901114
EnsemblMetazoa:FBtr0076304 GeneID:39188 KEGG:dme:Dmel_CG32055
UCSC:CG32055-RA FlyBase:FBgn0052055 InParanoid:Q9VT89 OMA:LHSNWLE
OrthoDB:EOG4XD26B PhylomeDB:Q9VT89 GenomeRNAi:39188 NextBio:812398
ArrayExpress:Q9VT89 Bgee:Q9VT89 Uniprot:Q9VT89
Length = 534
Score = 224 (83.9 bits), Expect = 2.2e-15, P = 2.2e-15
Identities = 96/388 (24%), Positives = 162/388 (41%)
Query: 76 LRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKIS 135
L+ L+L+ +++ L S F ++++N ++SYN+I A++ G L + S N I+
Sbjct: 100 LQKLNLTHAQLDELKSEQFPNPSEMINFDVSYNDILAITTKLMSGFGNLVYANFSENLIA 159
Query: 136 VINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLP 195
VI AFR +L L L+ N ++++ +LR L + NN + D L LP
Sbjct: 160 VIEPNAFRHMKNLRFLDLTTN----YQENITLGENANLRFLSISNNNLRDFQWCHLRVLP 215
Query: 196 HQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVT---LRTLHXXX 252
L L+L+ N +E LD + L NL L + + + L
Sbjct: 216 --KLEELHLHSNWLEH-LDMGIFYALPNLRVLNVSNNNLFEIKRTLFMAPGEIAPLELLD 272
Query: 253 XXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLV-----KINLIPNL 307
+ +L L L+L N + I AF L SL+ + KI+++P+
Sbjct: 273 YSSNIVKVLDDSVFCRLKKLRTLNLWLNQINRIHPRAFLGLSSLQTLHLQGNKISILPD- 331
Query: 308 DSIDQXXXXXXXXXXXXXXXXXAFSLTPLGTL-KCDRLDLSGNNFSNIDSVAFKSLFSLK 366
D + L K LDLS N +++ +A S+ +K
Sbjct: 332 DVFANLTALEKLDLSKNNIQKLGLRVFGERILRKLIYLDLSNNYIADLHPLALSSMPFIK 391
Query: 367 LVKINLIPNLDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLS 426
+++ L S+D R F QL+ + INEN L+++ ++ L + L N L+
Sbjct: 392 ELRLRR-NRLVSLDLRMFAPLRQLQLLTINEN-RLEEIDGEILDTLDRLNHLELNNNRLT 449
Query: 427 HLE--ASHFPLERISFLDLSDNPLHCDC 452
L S L ++ + L NP C C
Sbjct: 450 FLPDLKSSQNLLQLRNITLEGNPWQCLC 477
Score = 166 (63.5 bits), Expect = 5.5e-09, P = 5.5e-09
Identities = 69/237 (29%), Positives = 96/237 (40%)
Query: 51 PEVQTIILRENRISNVHYTLSF----YIELRSLDLSVNKINVLGSHNFEYQNKLLNLNIS 106
P ++ + + N + + TL L LD S N + VL F KL LN+
Sbjct: 239 PNLRVLNVSNNNLFEIKRTLFMAPGEIAPLELLDYSSNIVKVLDDSVFCRLKKLRTLNLW 298
Query: 107 YNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEI 166
N+I+ + F GL L+TL L NKIS++ F + LE L LS NNI +
Sbjct: 299 LNQINRIHPRAFLGLSSLQTLHLQGNKISILPDDVFANLTALEKLDLSKNNIQKL-GLRV 357
Query: 167 FSS--LKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNL 224
F L+ L L L NN I D+ LS++P + L L N + + LD L L
Sbjct: 358 FGERILRKLIYLDLSNNYIADLHPLALSSMPF--IKELRLRRNRLVS-LDLRMFAPLRQL 414
Query: 225 HTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPT-KQLSKLSALVNLDLSGN 280
L + TL L+ +P K L L N+ L GN
Sbjct: 415 QLLTINENRLEEIDGEILDTLDRLNHLELNNNRLTFLPDLKSSQNLLQLRNITLEGN 471
Score = 135 (52.6 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 87/359 (24%), Positives = 138/359 (38%)
Query: 75 ELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKI 134
E+ + D+S N I + + L+ N S N I+ + + F+ +K L+ LDL+ N
Sbjct: 123 EMINFDVSYNDILAITTKLMSGFGNLVYANFSENLIAVIEPNAFRHMKNLRFLDLTTNYQ 182
Query: 135 SVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNL 194
I + +L L +S NN+ F+ + L L L L +N + + + L
Sbjct: 183 ENIT---LGENANLRFLSISNNNLRDFQWCHL-RVLPKLEELHLHSNWLEHLDMGIFYAL 238
Query: 195 PHQSLHYLYL-NENLIETVLDNSF--PFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXX 251
P+ L L + N NL E + F P + L L L+ L
Sbjct: 239 PN--LRVLNVSNNNLFE-IKRTLFMAPGEIAPLELLDYSSNIVKVLDDSVFCRLKKLRTL 295
Query: 252 XXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKI--NLIPNLDS 309
I + LS+L L L GN S + F +L +L+ + + N I L
Sbjct: 296 NLWLNQINRIHPRAFLGLSSLQTLHLQGNKISILPDDVFANLTALEKLDLSKNNIQKLGL 355
Query: 310 IDQXXXXXXXXXXXXXXXXXAFSLTPLGTLKCD---RLDLSGNNFSNIDSVAFKSLFSLK 366
L PL L L N ++D F L L+
Sbjct: 356 RVFGERILRKLIYLDLSNNYIADLHPLALSSMPFIKELRLRRNRLVSLDLRMFAPLRQLQ 415
Query: 367 LVKINLIPNLDSIDQRAFVDNI-QLETVIINENMNLKQLPS-KLFQGNTNLKSVSLKGN 423
L+ IN L+ ID +D + +L + +N N L LP K Q L++++L+GN
Sbjct: 416 LLTINE-NRLEEIDGE-ILDTLDRLNHLELNNN-RLTFLPDLKSSQNLLQLRNITLEGN 471
>UNIPROTKB|Q96NI6 [details] [associations]
symbol:LRFN5 "Leucine-rich repeat and fibronectin type-III
domain-containing protein 5" species:9606 "Homo sapiens"
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR001611
InterPro:IPR003961 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS50853 PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
InterPro:IPR026906 Pfam:PF13306 HOGENOM:HOG000237343
HOVERGEN:HBG052352 EMBL:AK055365 EMBL:AK096627 EMBL:AL138498
EMBL:BC043165 IPI:IPI00396961 RefSeq:NP_689660.2 UniGene:Hs.136893
ProteinModelPortal:Q96NI6 SMR:Q96NI6 STRING:Q96NI6
PhosphoSite:Q96NI6 DMDM:116242620 PaxDb:Q96NI6 PRIDE:Q96NI6
DNASU:145581 Ensembl:ENST00000298119 GeneID:145581 KEGG:hsa:145581
UCSC:uc001wvm.3 CTD:145581 GeneCards:GC14P042076 HGNC:HGNC:20360
HPA:HPA001177 MIM:612811 neXtProt:NX_Q96NI6 PharmGKB:PA134888453
eggNOG:NOG249839 InParanoid:Q96NI6 KO:K16358 OMA:NAQCCKA
OrthoDB:EOG4X6C81 PhylomeDB:Q96NI6 GenomeRNAi:145581 NextBio:85141
ArrayExpress:Q96NI6 Bgee:Q96NI6 CleanEx:HS_LRFN5
Genevestigator:Q96NI6 GermOnline:ENSG00000165379 InterPro:IPR026879
PANTHER:PTHR24373:SF3 Uniprot:Q96NI6
Length = 719
Score = 223 (83.6 bits), Expect = 2.5e-15, Sum P(2) = 2.5e-15
Identities = 62/197 (31%), Positives = 94/197 (47%)
Query: 1 MNYFLTCIFLILALTKLNKAICPSRCQC--FDQKLEASCTDAGLEVVPIQLNPEVQTIIL 58
M L +FLI K ICP RC C L C GL VP ++ + L
Sbjct: 1 MEKILFYLFLIGIAVKAQ--ICPKRCVCQILSPNLATLCAKKGLLFVPPNIDRRTVELRL 58
Query: 59 RENRISNV-HYTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDT 117
+N ++N+ + L L LS N I+ + H F L L+++ N ++ ++ D
Sbjct: 59 ADNFVTNIKRKDFANMTSLVDLTLSRNTISFITPHAFADLRNLRALHLNSNRLTKITNDM 118
Query: 118 FKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILK 177
F GL L L L+ N++++I+ TAF D LE L LS+NN+ + + SL L
Sbjct: 119 FSGLSNLHHLILNNNQLTLISSTAFDDVFALEELDLSYNNLETIPWDAV-EKMVSLHTLS 177
Query: 178 LDNNQILDVPNNVLSNL 194
LD+N I ++P S+L
Sbjct: 178 LDHNMIDNIPKGTFSHL 194
Score = 49 (22.3 bits), Expect = 2.5e-15, Sum P(2) = 2.5e-15
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 514 CSSPPDIKGLEVKAVPENSVHCE 536
C+SPP + G ++PE CE
Sbjct: 263 CASPPLLTGRYFWSIPEEEFLCE 285
Score = 48 (22.0 bits), Expect = 3.2e-15, Sum P(2) = 3.2e-15
Identities = 16/78 (20%), Positives = 26/78 (33%)
Query: 444 SDNPLHCD--CNXXXXXXXXXXXXKSTMETTTVAYEMTSNTSISPGTTTEAQRVDRIIKN 501
SDN + C+ S +T+V+ + T P T + + V +
Sbjct: 607 SDNVIQSSETCSSQDSSTTTSALPPSWTSSTSVSQKQKRKTGTKPSTEPQNEAVTNVESQ 666
Query: 502 NHSLTIVLNNLKCSSPPD 519
N + S PPD
Sbjct: 667 NTNRNNSTALQLASRPPD 684
>UNIPROTKB|Q9NZU1 [details] [associations]
symbol:FLRT1 "Leucine-rich repeat transmembrane protein
FLRT1" species:9606 "Homo sapiens" [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0030674 "protein binding, bridging" evidence=NAS]
[GO:0005887 "integral to plasma membrane" evidence=NAS] [GO:0005057
"receptor signaling protein activity" evidence=NAS] [GO:0005578
"proteinaceous extracellular matrix" evidence=NAS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001611
InterPro:IPR003961 PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060
GO:GO:0005887 Gene3D:2.60.40.10 InterPro:IPR013783 EMBL:CH471076
GO:GO:0005578 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007155 GO:GO:0030674
GO:GO:0005057 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
EMBL:AF169675 EMBL:AY358308 EMBL:AK289931 EMBL:AP006333
EMBL:BC018370 IPI:IPI00291395 RefSeq:NP_037412.2 UniGene:Hs.584876
ProteinModelPortal:Q9NZU1 SMR:Q9NZU1 MINT:MINT-1778423
STRING:Q9NZU1 PhosphoSite:Q9NZU1 DMDM:215274159 PRIDE:Q9NZU1
DNASU:23769 Ensembl:ENST00000246841 GeneID:23769 KEGG:hsa:23769
UCSC:uc001nyi.1 CTD:23769 GeneCards:GC11P063871 HGNC:HGNC:3760
MIM:604806 neXtProt:NX_Q9NZU1 PharmGKB:PA28177 HOGENOM:HOG000290188
HOVERGEN:HBG051629 InParanoid:Q9NZU1 KO:K16362 OrthoDB:EOG4K9BBW
GenomeRNAi:23769 NextBio:46741 ArrayExpress:Q9NZU1 Bgee:Q9NZU1
CleanEx:HS_FLRT1 Genevestigator:Q9NZU1 GermOnline:ENSG00000126500
Uniprot:Q9NZU1
Length = 646
Score = 227 (85.0 bits), Expect = 2.6e-15, Sum P(2) = 2.6e-15
Identities = 83/304 (27%), Positives = 140/304 (46%)
Query: 2 NYFLTCIFLILALTK-LNKAICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRE 60
++ C LI LT+ ++ CPS C+C D C D GL +P + + T+ L+
Sbjct: 5 DWLFLCYGLIAFLTEVIDSTTCPSVCRC-DNGF-IYCNDRGLTSIPADIPDDATTLYLQN 62
Query: 61 NRISN--VHYTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTF 118
N+I+N + L + ++ + L N ++ L L++ N + +++D+
Sbjct: 63 NQINNAGIPQDLKTKVNVQVIYLYENDLD---EFPINLPRSLRELHLQDNNVRTIARDSL 119
Query: 119 KGLKELKTLDLSYNKISVIN--KTAFRDTLHLELLILSFNNITYFEDSEIFSSLK-SLRI 175
+ L+ L L N +S ++ + AF D+ L+LL LS N++ S I S L +L
Sbjct: 120 ARIPLLEKLHLDDNSVSTVSIEEDAFADSKQLKLLFLSRNHL-----SSIPSGLPHTLEE 174
Query: 176 LKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLI--ETVLDNSFPFTLTNLHTLALXXXX 233
L+LD+N+I +P + L SL L L+ NL+ + + D++F L NL L+L
Sbjct: 175 LRLDDNRISTIPLHAFKGL--NSLRRLVLDGNLLANQRIADDTFS-RLQNLTELSLVRNS 231
Query: 234 XXXXXXXX-XVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKS 292
L+ L+ IP L+K+ L LDLS NN + + F
Sbjct: 232 LAAPPLNLPSAHLQKLYLQDNAISH---IPYNTLAKMRELERLDLSNNNLTTLPRGLFDD 288
Query: 293 LFSL 296
L +L
Sbjct: 289 LGNL 292
Score = 43 (20.2 bits), Expect = 2.6e-15, Sum P(2) = 2.6e-15
Identities = 6/27 (22%), Positives = 12/27 (44%)
Query: 509 LNNLKCSSPPDIKGLEVKAVPENSVHC 535
+ L C P ++G+ +K + C
Sbjct: 324 VRGLMCQGPEKVRGMAIKDITSEMDEC 350
>UNIPROTKB|E7EW58 [details] [associations]
symbol:LRRN3 "Leucine-rich repeat neuronal protein 3"
species:9606 "Homo sapiens" [GO:0001934 "positive regulation of
protein phosphorylation" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0030131 "clathrin adaptor complex"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005886
InterPro:IPR003591 SMART:SM00369 GO:GO:0001934 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0030131 HGNC:HGNC:17200
EMBL:AC004142 IPI:IPI00924926 ProteinModelPortal:E7EW58 SMR:E7EW58
Ensembl:ENST00000421101 ArrayExpress:E7EW58 Bgee:E7EW58
Uniprot:E7EW58
Length = 273
Score = 201 (75.8 bits), Expect = 3.0e-15, P = 3.0e-15
Identities = 68/238 (28%), Positives = 121/238 (50%)
Query: 8 IFLILALTKLNKAI-----CPSRCQC-----FDQK---LEAS---CTDAGLEVVPIQLNP 51
+ L LA+T L +A+ CP C C F + +EAS C D GL P +L
Sbjct: 10 VLLGLAITTLVQAVDKKVDCPRLCTCEIRPWFTPRSIYMEASTVDCNDLGLLTFPARLPA 69
Query: 52 EVQTIILRENRISNVHYTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEIS 111
Q ++L+ N I+ + Y+ F + L LDLS N ++ + + N + +LL++ + N+++
Sbjct: 70 NTQILLLQTNNIAKIEYSTDFPVNLTGLDLSQNNLSSVTNINVKKMPQLLSVYLEENKLT 129
Query: 112 ALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLK 171
L + L L+ L +++N +S I+ AF +L L L+ N + +S+ F +L
Sbjct: 130 ELPEKCLSELSNLQELYINHNLLSTISPGAFIGLHNLLRLHLNSNRLQMI-NSKWFDALP 188
Query: 172 SLRILKLDNNQILDVPNNVLSNLPHQSLHYLYL-NENLIETVLDNSFPFTLTNLHTLA 228
+L IL + N I+ + + ++ P +L L + NL E + DN+ L NL +++
Sbjct: 189 NLEILMIGENPIIRIKD--MNFKPLINLRSLVIAGINLTE-IPDNAL-VGLENLESIS 242
Score = 132 (51.5 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 51/188 (27%), Positives = 84/188 (44%)
Query: 272 LVNLDLSGNNFSNIDSVAFKSLFSLKLV-----KINLIPN--LDSIDQXXXXXXXXXXXX 324
L LDLS NN S++ ++ K + L V K+ +P L +
Sbjct: 94 LTGLDLSQNNLSSVTNINVKKMPQLLSVYLEENKLTELPEKCLSELSNLQELYINHNLLS 153
Query: 325 XXXXXAFSLTPLGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAF 384
AF +G RL L+ N I+S F +L +L+++ I P + D F
Sbjct: 154 TISPGAF----IGLHNLLRLHLNSNRLQMINSKWFDALPNLEILMIGENPIIRIKDMN-F 208
Query: 385 VDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFPLERI---SFL 441
I L +++I +NL ++P G NL+S+S N L ++ H L+++ FL
Sbjct: 209 KPLINLRSLVI-AGINLTEIPDNALVGLENLESISFYDNRL--IKVPHVALQKVVNLKFL 265
Query: 442 DLSDNPLH 449
DL+ NP++
Sbjct: 266 DLNKNPIN 273
Score = 124 (48.7 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 46/200 (23%), Positives = 88/200 (44%)
Query: 81 LSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKT 140
L N I + ++ ++ L L++S N +S+++ K + +L ++ L NK++ + +
Sbjct: 76 LQTNNIAKI-EYSTDFPVNLTGLDLSQNNLSSVTNINVKKMPQLLSVYLEENKLTELPEK 134
Query: 141 AFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLH 200
+ +L+ L ++ N ++ F L +L L L++N++ + + LP+ L
Sbjct: 135 CLSELSNLQELYINHNLLSTISPGA-FIGLHNLLRLHLNSNRLQMINSKWFDALPN--LE 191
Query: 201 YLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXA 260
L + EN I + D +F L NL +L + V L L
Sbjct: 192 ILMIGENPIIRIKDMNFK-PLINLRSLVIAGINLTEIPDNALVGLENLESISFYDNRLIK 250
Query: 261 IPTKQLSKLSALVNLDLSGN 280
+P L K+ L LDL+ N
Sbjct: 251 VPHVALQKVVNLKFLDLNKN 270
>RGD|1565152 [details] [associations]
symbol:Flrt1 "fibronectin leucine rich transmembrane protein 1"
species:10116 "Rattus norvegicus" [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR001611 InterPro:IPR003961
PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060 RGD:1565152
GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 EMBL:CH473953
CTD:23769 KO:K16362 OrthoDB:EOG4K9BBW GeneTree:ENSGT00700000104442
IPI:IPI00390639 RefSeq:NP_001102630.1 UniGene:Rn.169901
Ensembl:ENSRNOT00000030625 GeneID:499308 KEGG:rno:499308
UCSC:RGD:1565152 OMA:TIFPSNG NextBio:702500 Uniprot:D4AC39
Length = 674
Score = 227 (85.0 bits), Expect = 3.1e-15, Sum P(2) = 3.1e-15
Identities = 83/304 (27%), Positives = 141/304 (46%)
Query: 2 NYFLTCIFLILALTK-LNKAICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRE 60
++ C LI LT+ ++ CPS C+C D C D GL +P + + T+ L+
Sbjct: 33 DWLFLCYGLIAFLTEVIDSTTCPSVCRC-DNGF-IYCNDRGLTSIPSDIPDDATTLYLQN 90
Query: 61 NRISN--VHYTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTF 118
N+I+N + L ++++ + L N ++ L L++ N + +++D+
Sbjct: 91 NQINNAGIPQDLKTKVKVQVIYLYENDLD---EFPINLPRSLRELHLQDNNVRTIARDSL 147
Query: 119 KGLKELKTLDLSYNKISVIN--KTAFRDTLHLELLILSFNNITYFEDSEIFSSLK-SLRI 175
+ L+ L L N +S ++ + AF D+ L+LL LS N++ S I S L +L
Sbjct: 148 ARIPLLEKLHLDDNSVSTVSIEEDAFADSKQLKLLFLSRNHL-----SSIPSGLPHTLEE 202
Query: 176 LKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLI--ETVLDNSFPFTLTNLHTLALXXXX 233
L+LD+N+I +P + L SL L L+ NL+ + + D++F L NL L+L
Sbjct: 203 LRLDDNRISTIPLHAFKGL--NSLRRLVLDGNLLANQRIADDTFS-RLQNLTELSLVRNS 259
Query: 234 XXXXXXXX-XVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKS 292
L+ L+ IP L+K+ L LDLS NN + + F
Sbjct: 260 LAAPPLNLPSAHLQKLYLQDNAISH---IPYNTLAKMRELERLDLSNNNLTTLPRGLFDD 316
Query: 293 LFSL 296
L +L
Sbjct: 317 LGNL 320
Score = 43 (20.2 bits), Expect = 3.1e-15, Sum P(2) = 3.1e-15
Identities = 6/27 (22%), Positives = 12/27 (44%)
Query: 509 LNNLKCSSPPDIKGLEVKAVPENSVHC 535
+ L C P ++G+ +K + C
Sbjct: 352 VRGLMCQGPEKVRGMAIKDITSEMDEC 378
>UNIPROTKB|Q7L0X0 [details] [associations]
symbol:TRIL "TLR4 interactor with leucine rich repeats"
species:9606 "Homo sapiens" [GO:0006954 "inflammatory response"
evidence=IEA] [GO:0045087 "innate immune response" evidence=IEA]
[GO:0002718 "regulation of cytokine production involved in immune
response" evidence=IDA] [GO:0001530 "lipopolysaccharide binding"
evidence=IDA] [GO:0046696 "lipopolysaccharide receptor complex"
evidence=IDA] [GO:0034142 "toll-like receptor 4 signaling pathway"
evidence=IDA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
EMBL:CH471073 GO:GO:0006954 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0045087 EMBL:CH236948
InterPro:IPR000372 SMART:SM00013 GO:GO:0034142 GO:GO:0046696
GO:GO:0001530 HSSP:Q9BZR6 EMBL:AC005013 Pfam:PF01463 EMBL:AB014544
EMBL:BC036337 IPI:IPI00006556 RefSeq:NP_055632.2 UniGene:Hs.21572
ProteinModelPortal:Q7L0X0 SMR:Q7L0X0 IntAct:Q7L0X0 DMDM:311033514
PRIDE:Q7L0X0 GeneID:9865 KEGG:hsa:9865 UCSC:uc003szt.3 CTD:9865
GeneCards:GC07M028992 HGNC:HGNC:22200 MIM:613356 neXtProt:NX_Q7L0X0
HOVERGEN:HBG066060 GenomeRNAi:9865 NextBio:37186
Genevestigator:Q7L0X0 GO:GO:0002718 Uniprot:Q7L0X0
Length = 811
Score = 225 (84.3 bits), Expect = 3.8e-15, P = 3.8e-15
Identities = 85/298 (28%), Positives = 136/298 (45%)
Query: 12 LALTKLNKAICPSRCQCFDQKLEASCTDAGLEVVP--IQL-NP-EVQTIILRENRISNVH 67
LAL L + +CP RC C CT+ GL VVP L +P +V T L N I+N+
Sbjct: 17 LALPPLAEPVCPERCDC-QHPQHLLCTNRGLRVVPKTSSLPSPHDVLTYSLGGNFITNIT 75
Query: 68 YTLSFYI--ELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELK 125
F+ +LR LDL N+I L FE ++L L + N + AL+ T L++L+
Sbjct: 76 -AFDFHRLGQLRRLDLQYNQIRSLHPKTFEKLSRLEELYLGNNLLQALAPGTLAPLRKLR 134
Query: 126 TLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILD 185
L + N+IS +++ +F L L L N + D+ +F+ L +L L L++N+I
Sbjct: 135 ILYANGNEISRLSRGSFEGLESLVKLRLDGNALGALPDA-VFAPLGNLLYLHLESNRIRF 193
Query: 186 VPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFT-LTNLHTLALXXXXXXXXXXXXXVT 244
+ N + L L +L L+ N ++ L ++ F L +L +L L
Sbjct: 194 LGKNAFAQLG--KLRFLNLSANELQPSLRHAATFAPLRSLSSLILSANNLQHLGPRIFQH 251
Query: 245 LRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
L L + + L AL L L GN S + + + L SL+ + ++
Sbjct: 252 LPRLGLLSLRGNQLTHLAPEAFWGLEALRELRLEGNRLSQLPTALLEPLHSLEALDLS 309
Score = 171 (65.3 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 67/247 (27%), Positives = 100/247 (40%)
Query: 52 EVQTIILRENRISNVH-YTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEI 110
+++ + L+ N+I ++H T L L L N + L KL L + NEI
Sbjct: 84 QLRRLDLQYNQIRSLHPKTFEKLSRLEELYLGNNLLQALAPGTLAPLRKLRILYANGNEI 143
Query: 111 SALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSL 170
S LS+ +F+GL+ L L L N + + F +L L L N I + F+ L
Sbjct: 144 SRLSRGSFEGLESLVKLRLDGNALGALPDAVFAPLGNLLYLHLESNRIRFL-GKNAFAQL 202
Query: 171 KSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALX 230
LR L L N++ + + P +SL L L+ N ++ + F L L L+L
Sbjct: 203 GKLRFLNLSANELQPSLRHAATFAPLRSLSSLILSANNLQHLGPRIFQH-LPRLGLLSLR 261
Query: 231 XXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAF 290
L L +PT L L +L LDLSGN S + F
Sbjct: 262 GNQLTHLAPEAFWGLEALRELRLEGNRLSQLPTALLEPLHSLEALDLSGNELSALHPATF 321
Query: 291 KSLFSLK 297
L L+
Sbjct: 322 GHLGRLR 328
Score = 136 (52.9 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 44/133 (33%), Positives = 72/133 (54%)
Query: 76 LRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKIS 135
L SL LS N + LG F++ +L L++ N+++ L+ + F GL+ L+ L L N++S
Sbjct: 231 LSSLILSANNLQHLGPRIFQHLPRLGLLSLRGNQLTHLAPEAFWGLEALRELRLEGNRLS 290
Query: 136 VINKTAFRDTLH-LELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNL 194
+ TA + LH LE L LS N ++ + F L LR L L NN + + ++ +
Sbjct: 291 QL-PTALLEPLHSLEALDLSGNELSALHPAT-FGHLGRLRELSLRNNALSALSGDIFAAS 348
Query: 195 PHQSLHYLYLNEN 207
P +L+ L L+ N
Sbjct: 349 P--ALYRLDLDGN 359
Score = 127 (49.8 bits), Expect = 0.00018, P = 0.00018
Identities = 83/333 (24%), Positives = 123/333 (36%)
Query: 134 ISVINKTAFRDTLHLELLILSFN-----NITYFEDSEIFSSLKSLRILKLDNNQILDVPN 188
+ V+ KT+ + H ++L S NIT F+ F L LR L L NQI +
Sbjct: 46 LRVVPKTSSLPSPH-DVLTYSLGGNFITNITAFD----FHRLGQLRRLDLQYNQIRSLHP 100
Query: 189 NVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTL 248
L L LYL NL++ + + L L L L +L
Sbjct: 101 KTFEKLSR--LEELYLGNNLLQALAPGTLA-PLRKLRILYANGNEISRLSRGSFEGLESL 157
Query: 249 HXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-L 307
A+P + L L+ L L N + AF L L+ +NL N L
Sbjct: 158 VKLRLDGNALGALPDAVFAPLGNLLYLHLESNRIRFLGKNAFAQLGKLRF--LNLSANEL 215
Query: 308 DSIDQXXXXXXXXXXXXXXXXXAFSLTPLGTL------KCDRLDLSGNNFSNIDSVAFKS 361
+ A +L LG + L L GN +++ AF
Sbjct: 216 QPSLRHAATFAPLRSLSSLILSANNLQHLGPRIFQHLPRLGLLSLRGNQLTHLAPEAFWG 275
Query: 362 LFSLKLVKINLIPNLDSIDQRAFVDNIQ-LETVIINENMNLKQLPSKLFQGNTNLKSVSL 420
L +L+ ++ L N S A ++ + LE + ++ N L L F L+ +SL
Sbjct: 276 LEALR--ELRLEGNRLSQLPTALLEPLHSLEALDLSGN-ELSALHPATFGHLGRLRELSL 332
Query: 421 KGNSLSHLEASHFPLERISF-LDLSDNPLHCDC 452
+ N+LS L F + LDL N CDC
Sbjct: 333 RNNALSALSGDIFAASPALYRLDLDGNGWTCDC 365
>UNIPROTKB|F1MSM8 [details] [associations]
symbol:SLITRK6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007409 "axonogenesis" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007409 GeneTree:ENSGT00680000099859 CTD:84189
OMA:YFELKAN EMBL:DAAA02033778 IPI:IPI00713179 RefSeq:XP_001249506.1
RefSeq:XP_002691956.1 UniGene:Bt.87936 Ensembl:ENSBTAT00000005757
GeneID:781119 KEGG:bta:781119 NextBio:20924630 Uniprot:F1MSM8
Length = 842
Score = 157 (60.3 bits), Expect = 4.1e-15, Sum P(2) = 4.1e-15
Identities = 40/134 (29%), Positives = 71/134 (52%)
Query: 79 LDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVIN 138
L L N + VL +++F +++++ +N I+ + F GL LK L +++N + ++
Sbjct: 71 LSLLNNGLTVLHTNDFSGLTNAISIHLGFNNIADIETGAFNGLGLLKQLHINHNSLEILK 130
Query: 139 KTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQS 198
+ F +LE L N IT E S FS L L++L L++N I +P N+ +P
Sbjct: 131 EDTFHGLENLEFLQADNNFITVIEPSA-FSKLNRLKVLILNDNAIESLPPNIFRFVP--- 186
Query: 199 LHYLYLNENLIETV 212
L +L L N ++T+
Sbjct: 187 LTHLDLRGNQLQTL 200
Score = 151 (58.2 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 58/188 (30%), Positives = 83/188 (44%)
Query: 15 TKLNKAICPSRCQC---FDQKLEASCTDAGLEVVPIQLNPEVQT---IILRENRISNVHY 68
T+L CP C C L C + +E + L P Q +IL N I +
Sbjct: 324 TQLPGLYCPIPCNCKVLSPSGLLIHCQERNIESLS-DLKPPPQNPRKLILAGNIIHTLLK 382
Query: 69 T-LSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTL 127
+ L Y L L L N+I VL +F +L L ++ N ++ LS F GL L+ L
Sbjct: 383 SDLVEYFTLEMLHLGNNRIEVLEEGSFMNLTRLQKLYLNGNHLTKLSGGMFLGLHNLEYL 442
Query: 128 DLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVP 187
L YN + I F L++L L+ NN+ IFS + RI L NQ +P
Sbjct: 443 YLEYNGVKEILPGTFNPMPKLKVLYLN-NNLLQVLPPHIFSGVPLTRI-NLKTNQFTHLP 500
Query: 188 -NNVLSNL 194
+N+L +L
Sbjct: 501 VSNILDDL 508
Score = 135 (52.6 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 50/171 (29%), Positives = 80/171 (46%)
Query: 22 CPSRCQCF--DQKLEASCTDAGLEVVP-IQLNPEVQT-IILRENRISNVHYT-LSFYIEL 76
C S C C D + +C + G++ + I + P + L N ++ +H S
Sbjct: 33 CDSLCNCEEKDGTMLINCEEKGIKKLSQISVPPSRPFHLSLLNNGLTVLHTNDFSGLTNA 92
Query: 77 RSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISV 136
S+ L N I + + F L L+I++N + L +DTF GL+ L+ L N I+V
Sbjct: 93 ISIHLGFNNIADIETGAFNGLGLLKQLHINHNSLEILKEDTFHGLENLEFLQADNNFITV 152
Query: 137 INKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVP 187
I +AF L++LIL+ N I + IF + L L L NQ+ +P
Sbjct: 153 IEPSAFSKLNRLKVLILNDNAIESLPPN-IFRFVP-LTHLDLRGNQLQTLP 201
Score = 130 (50.8 bits), Expect = 3.5e-12, Sum P(2) = 3.5e-12
Identities = 38/124 (30%), Positives = 65/124 (52%)
Query: 102 NLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYF 161
+L++ N ++ L + F GL ++ L +N I+ I AF L+ L ++ N++
Sbjct: 70 HLSLLNNGLTVLHTNDFSGLTNAISIHLGFNNIADIETGAFNGLGLLKQLHINHNSLEIL 129
Query: 162 EDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFT- 220
++ + F L++L L+ DNN I + + S L L L LN+N IE++ N F F
Sbjct: 130 KE-DTFHGLENLEFLQADNNFITVIEPSAFSKL--NRLKVLILNDNAIESLPPNIFRFVP 186
Query: 221 LTNL 224
LT+L
Sbjct: 187 LTHL 190
Score = 119 (46.9 bits), Expect = 4.1e-15, Sum P(2) = 4.1e-15
Identities = 32/116 (27%), Positives = 59/116 (50%)
Query: 340 KCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFVDNIQLETVIINENM 399
+ +L L+GN+ + + F L +L+ + + + I F +L+ + +N N+
Sbjct: 414 RLQKLYLNGNHLTKLSGGMFLGLHNLEYLYLEY-NGVKEILPGTFNPMPKLKVLYLNNNL 472
Query: 400 NLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHF--PLERISFLDLSDNPLHCDCN 453
L+ LP +F G L ++LK N +HL S+ L+ ++ +DL DNP C C+
Sbjct: 473 -LQVLPPHIFSG-VPLTRINLKTNQFTHLPVSNILDDLDLLTQIDLEDNPWDCSCD 526
Score = 85 (35.0 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 39/158 (24%), Positives = 61/158 (38%)
Query: 133 KISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLS 192
K+S I+ R HL LL N +T ++ FS L + + L N I D+ +
Sbjct: 57 KLSQISVPPSRP-FHLSLLN---NGLTVLHTND-FSGLTNAISIHLGFNNIADIETGAFN 111
Query: 193 NLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXX 252
L L L++N N +E + +++F L NL L L L
Sbjct: 112 GLG--LLKQLHINHNSLEILKEDTF-HGLENLEFLQADNNFITVIEPSAFSKLNRLKVLI 168
Query: 253 XXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAF 290
++P + + L +LDL GN + V F
Sbjct: 169 LNDNAIESLPPN-IFRFVPLTHLDLRGNQLQTLPYVGF 205
Score = 67 (28.6 bits), Expect = 9.9e-10, Sum P(2) = 9.9e-10
Identities = 36/197 (18%), Positives = 88/197 (44%)
Query: 343 RLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFVDNIQLETVIINENMNLK 402
+L L+GN + F+L+++ + ++ +++ +F++ +L+ + +N N +L
Sbjct: 369 KLILAGNIIHTLLKSDLVEYFTLEMLHLGN-NRIEVLEEGSFMNLTRLQKLYLNGN-HLT 426
Query: 403 QLPSKLFQGNTNLKSVSLKGNSLSHLEASHF-PLERISFLDLSDN-----PLHCDCNXXX 456
+L +F G NL+ + L+ N + + F P+ ++ L L++N P H
Sbjct: 427 KLSGGMFLGLHNLEYLYLEYNGVKEILPGTFNPMPKLKVLYLNNNLLQVLPPHIFSGVPL 486
Query: 457 XXXXXXXXXKSTMETTTVAYEMTSNTSI----SP-GTTTEAQRVDRIIKNNHSLTIVLNN 511
+ + + + ++ T I +P + + + + I+ T+ +
Sbjct: 487 TRINLKTNQFTHLPVSNILDDLDLLTQIDLEDNPWDCSCDLVGLQQWIQKLSKNTVT-DE 545
Query: 512 LKCSSPPDIKGLEVKAV 528
+ C+SP + E+KA+
Sbjct: 546 ILCTSPEHLHKKELKAL 562
Score = 59 (25.8 bits), Expect = 8.0e-05, Sum P(2) = 8.0e-05
Identities = 14/40 (35%), Positives = 23/40 (57%)
Query: 263 TKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
T S L+ +++ L NN ++I++ AF L LK + IN
Sbjct: 83 TNDFSGLTNAISIHLGFNNIADIETGAFNGLGLLKQLHIN 122
Score = 45 (20.9 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 8/26 (30%), Positives = 16/26 (61%)
Query: 508 VLNNLKCSSPPDIKGLEVKAVPENSV 533
V+ ++ C+SPP KG + + + S+
Sbjct: 243 VIGDVVCNSPPFFKGSILSRLKKESI 268
Score = 37 (18.1 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 269 LSALVNLDLSGNNFSNIDSVAFKSLFSLK 297
L+ L L L+GN+ + + F L +L+
Sbjct: 412 LTRLQKLYLNGNHLTKLSGGMFLGLHNLE 440
>ZFIN|ZDB-GENE-080327-6 [details] [associations]
symbol:flrt1b "fibronectin leucine rich transmembrane
1b" species:7955 "Danio rerio" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001611 InterPro:IPR003961 PROSITE:PS50853
PROSITE:PS51450 SMART:SM00060 ZFIN:ZDB-GENE-080327-6
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GeneTree:ENSGT00700000104442 EMBL:BX004778 IPI:IPI00876731
Ensembl:ENSDART00000114790 Bgee:F1QF54 Uniprot:F1QF54
Length = 696
Score = 227 (85.0 bits), Expect = 4.4e-15, Sum P(2) = 4.4e-15
Identities = 92/310 (29%), Positives = 140/310 (45%)
Query: 4 FLTCIFLILALTKLNKAICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRI 63
FL + L L + L + CPS C+C D + C D GL ++P L + L+ NRI
Sbjct: 15 FLLLLCLTLLVEVLEEVPCPSACRCDDGFIY--CNDRGLTLIP-PLPLTAAVLYLQNNRI 71
Query: 64 SNVHYTLSFY--IELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGL 121
N S + +R + L N+++ +H L L++ N I L + L
Sbjct: 72 DNAGLPTSLERRLTVRVVYLYDNELDDFPTH---LPPSLRELHLQDNNIRTLPRSALARL 128
Query: 122 KELKTLDLSYNKISVIN--KTAFRDTLHLELLILSFNNITYFEDSEIFSSLK-SLRILKL 178
L+ L + N IS ++ AF + L LL LS N++ S I S L SL L+L
Sbjct: 129 PLLEKLHMDDNSISTVSIEDKAFTNNPRLRLLFLSRNHL-----SSIPSGLPASLEELRL 183
Query: 179 DNNQILDVPNNVLSNLPHQSLHYLYLNENLI--ETVLDNSFPFTLTNLHTLALXXXXXXX 236
D+N+I +P + L SL L+L+ NL+ + + D++F L+NL L+L
Sbjct: 184 DDNRISTIPTHAFRGL--SSLRRLFLDGNLLANQRIADDTFS-RLSNLTELSLVRNSLQA 240
Query: 237 XXXXXXVTLRTLHXXXXXXXXXXA--IPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLF 294
+ L +LH +P L + L LD+SGNN + + FK L
Sbjct: 241 PP----LNLPSLHLLRLYLQDNAIAHMPRGSLDGMRRLQKLDISGNNLTTLPRGLFKDLD 296
Query: 295 SLK--LVKIN 302
SL LV+ N
Sbjct: 297 SLSQLLVRGN 306
Score = 123 (48.4 bits), Expect = 0.00041, P = 0.00041
Identities = 77/303 (25%), Positives = 121/303 (39%)
Query: 158 ITYFEDSEI--FSSL--KSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVL 213
+ Y D+E+ F + SLR L L +N I +P + L+ LP L L++++N I TV
Sbjct: 88 VVYLYDNELDDFPTHLPPSLRELHLQDNNIRTLPRSALARLP--LLEKLHMDDNSISTVS 145
Query: 214 DNSFPFTLT-NLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSAL 272
FT L L L +L L IPT LS+L
Sbjct: 146 IEDKAFTNNPRLRLLFLSRNHLSSIPSGLPASLEELRLDDNRIST---IPTHAFRGLSSL 202
Query: 273 VNLDLSGNNFSNIDSVAFKSLFSLK-LVKINLIPNLDSIDQXXXXX-XXXXXXXXXXXXA 330
L L GN +N +A + L L +++L+ N S+ A
Sbjct: 203 RRLFLDGNLLAN-QRIADDTFSRLSNLTELSLVRN--SLQAPPLNLPSLHLLRLYLQDNA 259
Query: 331 FSLTPLGTL----KCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIP-----NL----D 377
+ P G+L + +LD+SGNN + + FK L SL + + P NL D
Sbjct: 260 IAHMPRGSLDGMRRLQKLDISGNNLTTLPRGLFKDLDSLSQLLVRGNPWYCGCNLRWLHD 319
Query: 378 SIDQRAFVDNIQLETVIINEN---MNLKQLPSKLFQGNTNLKSVS-LKGNSLSHLEASHF 433
+ +R ++ T E M L+ L S+L + + + GN ++ E +F
Sbjct: 320 WLHERGSSVTVRGLTCHAPERLRGMALRDLSSQLEDCEVTVDAAGGMVGNEVAKKEKGYF 379
Query: 434 PLE 436
P +
Sbjct: 380 PTQ 382
Score = 42 (19.8 bits), Expect = 4.4e-15, Sum P(2) = 4.4e-15
Identities = 6/31 (19%), Positives = 16/31 (51%)
Query: 506 TIVLNNLKCSSPPDIKGLEVKAVPENSVHCE 536
++ + L C +P ++G+ ++ + CE
Sbjct: 327 SVTVRGLTCHAPERLRGMALRDLSSQLEDCE 357
>UNIPROTKB|E1BG29 [details] [associations]
symbol:GP5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0010544 "negative regulation of platelet activation"
evidence=IEA] [GO:0007160 "cell-matrix adhesion" evidence=IEA]
[GO:0005518 "collagen binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007160
GO:GO:0010544 GeneTree:ENSGT00700000104286 OMA:AMIKIGQ
EMBL:DAAA02001732 EMBL:DAAA02001733 EMBL:DAAA02001734
EMBL:DAAA02001735 IPI:IPI00711271 Ensembl:ENSBTAT00000017571
NextBio:20873574 Uniprot:E1BG29
Length = 583
Score = 222 (83.2 bits), Expect = 4.5e-15, P = 4.5e-15
Identities = 80/351 (22%), Positives = 162/351 (46%)
Query: 53 VQTIILRENRISNVHY-TLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEIS 111
+Q ++L ++ +S + T + I+L++L LS NKI L S + L L + NE+
Sbjct: 76 LQRLLLSDSHVSAIAPGTFNDPIKLKTLRLSRNKITHLPSALLDNLVLLEQLFLDGNELK 135
Query: 112 ALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLK 171
+L ++ F+ L L+ L L+ N+++ + + F +L+LL LS NN+T+ + +F
Sbjct: 136 SLDQNLFQKLVHLQELFLNQNQLAFLPASLFTHLGNLKLLDLSGNNLTHLPEG-LFGVQV 194
Query: 172 SLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXX 231
L+ L L +N++ + + +L +L ++L L L+ N + +++ +F L +L +L L
Sbjct: 195 KLQKLLLHSNRLASLESGLLDSL--RALTELQLHTNHLRSIVPGAFD-RLRSLSSLTLSE 251
Query: 232 XXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFK 291
+ L +P ++ L L L + + AF+
Sbjct: 252 NRLEFLPSALFLHSHNLTFLTLSENPLEELPKVLFGEIGGLRELRLKSTQLRTLPAAAFR 311
Query: 292 SLFSLKLVKINLIPNLDSIDQXXXXXXXXXXXXXXXXXAFSLTPLGTLK--CD--RLDLS 347
+L L++++++L P L ++ + + P G L+ C + L
Sbjct: 312 NLTGLRVLEVSLSPRLSALPEDAFRGLGELQVLALSSTGLASLPAGLLRGLCRLRHVSLR 371
Query: 348 GNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFVDNIQLETVIINEN 398
N + S F++L SL+ V+++ L+++ AF +L V++ N
Sbjct: 372 SNRLRALPSALFRNLSSLEEVQLDH-NQLETLPGDAFEALPRLAGVLLGHN 421
Score = 199 (75.1 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 93/371 (25%), Positives = 153/371 (41%)
Query: 89 LGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHL 148
L +++F L L +S + +SA++ TF +LKTL LS NKI+ + + + L
Sbjct: 65 LQNNSFSDMTVLQRLLLSDSHVSAIAPGTFNDPIKLKTLRLSRNKITHLPSALLDNLVLL 124
Query: 149 ELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENL 208
E L L N + D +F L L+ L L+ NQ+ +P ++ ++L + L L L+ N
Sbjct: 125 EQLFLDGNELKSL-DQNLFQKLVHLQELFLNQNQLAFLPASLFTHLGNLKL--LDLSGNN 181
Query: 209 IETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSK 268
+ + + F + L L L +LR L +I +
Sbjct: 182 LTHLPEGLFGVQV-KLQKLLLHSNRLASLESGLLDSLRALTELQLHTNHLRSIVPGAFDR 240
Query: 269 LSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQXXXXXXXXXXXXXXX 327
L +L +L LS N + S F L S L + L N L+ + +
Sbjct: 241 LRSLSSLTLSENRLEFLPSALF--LHSHNLTFLTLSENPLEELPKVLFGEIGGLRELRLK 298
Query: 328 XXAFSLTPLGTLK----CDRLDLS-GNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQR 382
P + L++S S + AF+ L L+++ ++ L S+
Sbjct: 299 STQLRTLPAAAFRNLTGLRVLEVSLSPRLSALPEDAFRGLGELQVLALSST-GLASLPAG 357
Query: 383 AFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFL 441
+L V + N L+ LPS LF+ ++L+ V L N L L F L R++ +
Sbjct: 358 LLRGLCRLRHVSLRSN-RLRALPSALFRNLSSLEEVQLDHNQLETLPGDAFEALPRLAGV 416
Query: 442 DLSDNPLHCDC 452
L NP CDC
Sbjct: 417 LLGHNPWRCDC 427
>UNIPROTKB|F1P9F0 [details] [associations]
symbol:LGR4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016500 "protein-hormone receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002131 InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237
PRINTS:PR00373 PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021
InterPro:IPR003591 SMART:SM00369 GO:GO:0016500
GeneTree:ENSGT00650000092962 OMA:DGYWSDC EMBL:AAEX03013024
Ensembl:ENSCAFT00000016178 Uniprot:F1P9F0
Length = 905
Score = 225 (84.3 bits), Expect = 4.5e-15, P = 4.5e-15
Identities = 109/388 (28%), Positives = 167/388 (43%)
Query: 69 TLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLD 128
TL+ LR D+S+N I L F+ L L ++ N++S + GLKELK L
Sbjct: 8 TLNSLPALR--DISMNNITQLPEDAFKNFPFLEELRLAGNDLSFIHPKALSGLKELKVLT 65
Query: 129 LSYNKISVINKTAFRDTLHLELLILSFNNITYF-EDSEIFSSLKSLRILKLDNNQILDVP 187
L N++ + A R L+ L L N+IT EDS F L LR L LD+N +++VP
Sbjct: 66 LQNNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDS--FEGLAQLRHLWLDDNSLMEVP 123
Query: 188 NNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRT 247
+ LSNLP +L L L N I ++ D +F L++L L L L
Sbjct: 124 VHPLSNLP--TLQALTLALNKISSIPDYAFT-NLSSLVVLHLHNNKIKNLGQHCFDGLDN 180
Query: 248 LHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKI--NLIP 305
L P + + L +L L N+ S I AF L+ + + N +
Sbjct: 181 LETLDLNYNNLGEFP-QAIKALPSLKELLFHSNSISVIPDGAFDGNPLLRTIHLYDNPLS 239
Query: 306 NL-DSIDQXXXXXXXXXXXXXXXXXAF-SLTPLGTLKCDRLDLSGNNFSNIDSVAFKSLF 363
+ +S F +LT GT+ + L L+G S+I S +
Sbjct: 240 FVGNSAFHNLSDLHSLVIRGASMVQQFPNLT--GTVHLESLTLTGTKISSISSNLCQEQK 297
Query: 364 SLKLVKI--NLIPNLDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLK 421
L+ + + N I +L S D ++ I L+ N+ + Q+ FQG +L+ + L
Sbjct: 298 MLRTLDLSYNSIKDLPSFDGCHALEEISLQR---NQ---IHQIKEGTFQGLVSLRILDLS 351
Query: 422 GNSLSHLEASHFP-LERISFLDLSDNPL 448
N + + F L I+ LD+S N L
Sbjct: 352 RNQIHEIHNRAFAKLGSITNLDISFNEL 379
Score = 156 (60.0 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 77/323 (23%), Positives = 134/323 (41%)
Query: 53 VQTIILRENRISNV-HYTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEIS 111
+Q++ L N I++V + +LR L L N + + H L L ++ N+IS
Sbjct: 85 LQSLRLDANHITSVPEDSFEGLAQLRHLWLDDNSLMEVPVHPLSNLPTLQALTLALNKIS 144
Query: 112 ALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLK 171
++ F L L L L NKI + + F +LE L L++NN+ F + +L
Sbjct: 145 SIPDYAFTNLSSLVVLHLHNNKIKNLGQHCFDGLDNLETLDLNYNNLGEFPQA--IKALP 202
Query: 172 SLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXX 231
SL+ L +N I +P+ P L ++L +N + V +++F L++LH+L +
Sbjct: 203 SLKELLFHSNSISVIPDGAFDGNP--LLRTIHLYDNPLSFVGNSAF-HNLSDLHSLVIRG 259
Query: 232 XXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSV--- 288
T+ L +I + + L LDLS N+ ++ S
Sbjct: 260 ASMVQQFPNLTGTVH-LESLTLTGTKISSISSNLCQEQKMLRTLDLSYNSIKDLPSFDGC 318
Query: 289 -AFKSLFSLKLVKINLIPN--LDSIDQXXXXXXXXXXXXXXXXXAFSLTPLGTLKCDRLD 345
A + + SL+ +I+ I + AF+ LG++ LD
Sbjct: 319 HALEEI-SLQRNQIHQIKEGTFQGLVSLRILDLSRNQIHEIHNRAFA--KLGSIT--NLD 373
Query: 346 LSGNNFSNIDSVAFKSLFSLKLV 368
+S N ++ + L LKLV
Sbjct: 374 ISFNELTSFPTEGLSGLNQLKLV 396
Score = 155 (59.6 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 63/255 (24%), Positives = 113/255 (44%)
Query: 52 EVQTIILRENRISNVH-YTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEI 110
+++ + L +N + V + LS L++L L++NKI+ + + F + L+ L++ N+I
Sbjct: 108 QLRHLWLDDNSLMEVPVHPLSNLPTLQALTLALNKISSIPDYAFTNLSSLVVLHLHNNKI 167
Query: 111 SALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSL 170
L + F GL L+TLDL+YN + + A + L+ L+ N+I+ D F
Sbjct: 168 KNLGQHCFDGLDNLETLDLNYNNLGEFPQ-AIKALPSLKELLFHSNSISVIPDGA-FDGN 225
Query: 171 KSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLN-ENLIETVLDNSFP-FTLT-NLHTL 227
LR + L +N + V N+ NL LH L + ++++ FP T T +L +L
Sbjct: 226 PLLRTIHLYDNPLSFVGNSAFHNL--SDLHSLVIRGASMVQ-----QFPNLTGTVHLESL 278
Query: 228 ALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDS 287
L + L +P+ AL + L N I
Sbjct: 279 TLTGTKISSISSNLCQEQKMLRTLDLSYNSIKDLPS--FDGCHALEEISLQRNQIHQIKE 336
Query: 288 VAFKSLFSLKLVKIN 302
F+ L SL+++ ++
Sbjct: 337 GTFQGLVSLRILDLS 351
Score = 148 (57.2 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 50/153 (32%), Positives = 81/153 (52%)
Query: 53 VQTIILRENRISNVHYTLSFYIE-LRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEIS 111
++++ L +IS++ L + LR+LDLS N I L S F+ + L +++ N+I
Sbjct: 275 LESLTLTGTKISSISSNLCQEQKMLRTLDLSYNSIKDLPS--FDGCHALEEISLQRNQIH 332
Query: 112 ALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLK 171
+ + TF+GL L+ LDLS N+I I+ AF + L +SFN +T F +E S L
Sbjct: 333 QIKEGTFQGLVSLRILDLSRNQIHEIHNRAFAKLGSITNLDISFNELTSFP-TEGLSGLN 391
Query: 172 SLRIL-KLDNNQILDVPNNVLSNLPHQSLHYLY 203
L+++ L + L + V NL S+ Y Y
Sbjct: 392 QLKLVGNLKLKEALAAKDFV--NLRSLSVPYAY 422
Score = 134 (52.2 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 52/174 (29%), Positives = 77/174 (44%)
Query: 44 VVPIQLNPEVQTIILRENRISNV-HYTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLN 102
V P+ P +Q + L N+IS++ Y + L L L NKI LG H F+ + L
Sbjct: 124 VHPLSNLPTLQALTLALNKISSIPDYAFTNLSSLVVLHLHNNKIKNLGQHCFDGLDNLET 183
Query: 103 LNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFE 162
L+++YN + + K L LK L N ISVI AF L + L ++N F
Sbjct: 184 LDLNYNNLGEFPQ-AIKALPSLKELLFHSNSISVIPDGAFDGNPLLRTIHL-YDNPLSFV 241
Query: 163 DSEIFSSLKSLRILKLDN-NQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDN 215
+ F +L L L + + + PN L+ H L L L I ++ N
Sbjct: 242 GNSAFHNLSDLHSLVIRGASMVQQFPN--LTGTVH--LESLTLTGTKISSISSN 291
>MGI|MGI:107935 [details] [associations]
symbol:Lrig1 "leucine-rich repeats and immunoglobulin-like
domains 1" species:10090 "Mus musculus" [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:107935 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GeneTree:ENSGT00690000101816 Pfam:PF01463 CTD:26018
HOGENOM:HOG000113380 HOVERGEN:HBG052353 OMA:ESNGVCP
OrthoDB:EOG48PMJN ChiTaRS:LRIG1 EMBL:D78572 EMBL:AC122272
EMBL:AC155330 IPI:IPI00136475 PIR:A58532 RefSeq:NP_032403.2
UniGene:Mm.245210 ProteinModelPortal:P70193 SMR:P70193
STRING:P70193 PhosphoSite:P70193 PaxDb:P70193 PRIDE:P70193
Ensembl:ENSMUST00000032105 Ensembl:ENSMUST00000101126 GeneID:16206
KEGG:mmu:16206 UCSC:uc009czu.1 InParanoid:P70193 NextBio:289161
Bgee:P70193 Genevestigator:P70193 GermOnline:ENSMUSG00000030029
Uniprot:P70193
Length = 1091
Score = 235 (87.8 bits), Expect = 4.6e-15, Sum P(2) = 4.6e-15
Identities = 113/418 (27%), Positives = 176/418 (42%)
Query: 19 KAICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSF--YIEL 76
+A C + C C L+ C+ GL +P L +++ L NR+S + + +F L
Sbjct: 40 RAPCAAACTCAGDSLD--CSGRGLATLPRDLPSWTRSLNLSYNRLSEID-SAAFEDLTNL 96
Query: 77 RSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISV 136
+ + L+ N++ + S +++L + +N+I ++ K L+ LDLS N I+
Sbjct: 97 QEVYLNSNELTAIPSLGAASIG-VVSLFLQHNKILSVDGSQLKSYLSLEVLDLSSNNITE 155
Query: 137 INKTAFRDTLHLELLILSFNNITYFEDSEIFSSL-KSLRILKLDNNQILDVPNNVLSNLP 195
I + F + L + L L+ N I+ E S F L +SL L+L N+I +P LP
Sbjct: 156 IRSSCFPNGLRIRELNLASNRISILE-SGAFDGLSRSLLTLRLSKNRITQLPVKAFK-LP 213
Query: 196 HQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXX 255
L L LN N I + +F L +L L L L +H
Sbjct: 214 R--LTQLDLNRNRIRLIEGLTFQ-GLDSLEVLRLQRNNISRLTDGAFWGLSKMHVLHLEY 270
Query: 256 XXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINL-IPNLDSIDQXX 314
+ + L L+AL L LS N+ S I + F KL ++ L NL +D+
Sbjct: 271 NSLVEVNSGSLYGLTALHQLHLSNNSISRIQRDGWS--FCQKLHELILSFNNLTRLDEES 328
Query: 315 XXXXXXXXXXXXXXXAFSLTPLGT---LKCDR-LDLSGNNFSN-ID--SVAFKSLFSLKL 367
A S G LK R LDL N S I+ S AF L +L
Sbjct: 329 LAELSSLSILRLSHNAISHIAEGAFKGLKSLRVLDLDHNEISGTIEDTSGAFTGLDNLS- 387
Query: 368 VKINLIPN-LDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNS 424
K+ L N + S+ +RAF LE + + EN ++ + F NLK + + S
Sbjct: 388 -KLTLFGNKIKSVAKRAFSGLESLEHLNLGENA-IRSVQFDAFAKMKNLKELYISSES 443
Score = 156 (60.0 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 80/354 (22%), Positives = 144/354 (40%)
Query: 102 NLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYF 161
+LN+SYN +S + F+ L L+ + L+ N+++ I ++ + L L N I
Sbjct: 74 SLNLSYNRLSEIDSAAFEDLTNLQEVYLNSNELTAIPSLGAA-SIGVVSLFLQHNKILSV 132
Query: 162 EDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTL 221
+ S++ S L SL +L L +N I ++ ++ N + L L N I + +F
Sbjct: 133 DGSQLKSYL-SLEVLDLSSNNITEIRSSCFPN--GLRIRELNLASNRISILESGAFDGLS 189
Query: 222 TNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNN 281
+L TL L L L I L +L L L NN
Sbjct: 190 RSLLTLRLSKNRITQLPVKAF-KLPRLTQLDLNRNRIRLIEGLTFQGLDSLEVLRLQRNN 248
Query: 282 FSNIDSVAFKSLFSLKLVKINLIPNLDSIDQXXXXXXXXXXXXXXXXXAFS-LTPLGTLK 340
S + AF L + ++ + +L ++ + S + G
Sbjct: 249 ISRLTDGAFWGLSKMHVLHLEY-NSLVEVNSGSLYGLTALHQLHLSNNSISRIQRDGWSF 307
Query: 341 CDRLD---LSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAF--VDNIQLETVII 395
C +L LS NN + +D + L SL +++++ + I + AF + ++++ +
Sbjct: 308 CQKLHELILSFNNLTRLDEESLAELSSLSILRLSHNA-ISHIAEGAFKGLKSLRVLDLDH 366
Query: 396 NENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPL 448
NE + S F G NL ++L GN + + F LE + L+L +N +
Sbjct: 367 NEISGTIEDTSGAFTGLDNLSKLTLFGNKIKSVAKRAFSGLESLEHLNLGENAI 420
Score = 39 (18.8 bits), Expect = 4.6e-15, Sum P(2) = 4.6e-15
Identities = 7/23 (30%), Positives = 13/23 (56%)
Query: 514 CSSPPDIKGLEVKAVPENSVHCE 536
C+ P +KG + +V +S C+
Sbjct: 470 CAHPESLKGQSIFSVLPDSFVCD 492
>UNIPROTKB|Q6NUI6 [details] [associations]
symbol:CHADL "Chondroadherin-like protein" species:9606
"Homo sapiens" [GO:0005578 "proteinaceous extracellular matrix"
evidence=IEA] [GO:0031012 "extracellular matrix" evidence=ISS]
InterPro:IPR001611 PROSITE:PS51450 EMBL:CH471095 GO:GO:0005578
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR000372 SMART:SM00013 EMBL:AL035681 EMBL:BC012882
EMBL:BC019839 EMBL:BC040188 EMBL:BC048421 EMBL:BC068590
IPI:IPI00402280 IPI:IPI00855816 RefSeq:NP_612490.1
UniGene:Hs.344488 HSSP:Q9BZR6 ProteinModelPortal:Q6NUI6 SMR:Q6NUI6
DMDM:158563972 PaxDb:Q6NUI6 PRIDE:Q6NUI6 Ensembl:ENST00000216241
GeneID:150356 KEGG:hsa:150356 UCSC:uc003azq.4 UCSC:uc010gyj.3
CTD:150356 GeneCards:GC22M041625 HGNC:HGNC:25165 HPA:HPA005696
HPA:HPA024654 neXtProt:NX_Q6NUI6 PharmGKB:PA162382224
eggNOG:NOG318740 HOGENOM:HOG000111626 HOVERGEN:HBG095510
InParanoid:Q6NUI6 OMA:ICDNSRR GenomeRNAi:150356 NextBio:86414
ArrayExpress:Q6NUI6 Bgee:Q6NUI6 CleanEx:HS_CHADL
Genevestigator:Q6NUI6 Uniprot:Q6NUI6
Length = 762
Score = 150 (57.9 bits), Expect = 5.4e-15, Sum P(3) = 5.4e-15
Identities = 66/281 (23%), Positives = 111/281 (39%)
Query: 8 IFLILALTKLNKAI-CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEV-QTIILRENRISN 65
+ L+LA + A CP C C + + +C L VP + PE+ Q + L+ N +
Sbjct: 18 VLLLLAPARQAAAQRCPQACICDNSRRHVACRYQNLTEVPDAI-PELTQRLDLQGNLLKV 76
Query: 66 VHYTLSFYI-ELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKEL 124
+ + L LDL ++ ++ F +LL LN++ N + L ++ GL L
Sbjct: 77 IPAAAFQGVPHLTHLDLRHCEVELVAEGAFRGLGRLLLLNLASNHLRELPQEALDGLGSL 136
Query: 125 KTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQIL 184
+ L+L N + + F L L L+ N + Y + F L +R L+L +N +
Sbjct: 137 RRLELEGNALEELRPGTFGALGALATLNLAHNALVYLP-AMAFQGLLRVRWLRLSHNALS 195
Query: 185 DVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVT 244
+ L+ LP +L L L+ N ++ L L L L +
Sbjct: 196 VLAPEALAGLP--ALRRLSLHHNELQA-LPGPVLSQARGLARLELGHNPLTYAGEEDGLA 252
Query: 245 LRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNI 285
L L A+ + + L LDL GN +
Sbjct: 253 LPGLRELLLDGGALQALGPRAFAHCPRLHTLDLRGNQLDTL 293
Score = 138 (53.6 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 52/194 (26%), Positives = 80/194 (41%)
Query: 20 AICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNV-HYTLSFYIELRS 78
A CP C C + +SC GL+ VP + Q + LR N +V L S
Sbjct: 394 APCPRACVCVPESRHSSCEGCGLQAVPRGFPSDTQLLDLRRNHFPSVPRAAFPGLGHLVS 453
Query: 79 LDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVIN 138
L L I L + +L+ L +S N+++ LS +G L L L N+ +
Sbjct: 454 LHLQHCGIAELEAGALAGLGRLIYLYLSDNQLAGLSAAALEGAPRLGYLYLERNRFLQVP 513
Query: 139 KTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQS 198
A R L L L N + ++ ++LR + L N+I +V L P +
Sbjct: 514 GAALRALPSLFSLHLQDNAVDRLAPGDL-GRTRALRWVYLSGNRITEVSLGALG--PARE 570
Query: 199 LHYLYLNENLIETV 212
L L+L+ N + V
Sbjct: 571 LEKLHLDRNQLREV 584
Score = 123 (48.4 bits), Expect = 5.4e-15, Sum P(3) = 5.4e-15
Identities = 52/185 (28%), Positives = 81/185 (43%)
Query: 275 LDLSGNNFSNIDSVAFK---SLFSLKLVKINLIPNLDSIDQXXXXXXXXXXXXXXXXXAF 331
L L N F + A + SLFSL L + N + L D
Sbjct: 502 LYLERNRFLQVPGAALRALPSLFSLHL-QDNAVDRLAPGDLGRTRALRWVYLSGNRITEV 560
Query: 332 SLTPLGTLK-CDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFVD-NIQ 389
SL LG + ++L L N + + A + L +L ++++ P L ++ AF
Sbjct: 561 SLGALGPARELEKLHLDRNQLREVPTGALEGLPALLELQLSGNP-LRALRDGAFQPVGRS 619
Query: 390 LETVIINENMNLKQLPSKLFQG-NTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNP 447
L+ + +N + L+Q+ F G L+S+ L+ N L L A P L ++ +DLS NP
Sbjct: 620 LQHLFLNSS-GLEQICPGAFSGLGPGLQSLHLQKNQLRALPA--LPSLSQLELIDLSSNP 676
Query: 448 LHCDC 452
HCDC
Sbjct: 677 FHCDC 681
Score = 60 (26.2 bits), Expect = 1.3e-08, Sum P(3) = 1.3e-08
Identities = 22/68 (32%), Positives = 34/68 (50%)
Query: 382 RAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISF 440
R F + QL + + N + +P F G +L S+ L+ ++ LEA L R+ +
Sbjct: 421 RGFPSDTQL--LDLRRN-HFPSVPRAAFPGLGHLVSLHLQHCGIAELEAGALAGLGRLIY 477
Query: 441 LDLSDNPL 448
L LSDN L
Sbjct: 478 LYLSDNQL 485
Score = 59 (25.8 bits), Expect = 1.6e-08, Sum P(3) = 1.6e-08
Identities = 17/52 (32%), Positives = 24/52 (46%)
Query: 401 LKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFPLERISFLDLSDNPLHCDC 452
L+ L + F L ++ L+GN L L P ++ L L NPL C C
Sbjct: 266 LQALGPRAFAHCPRLHTLDLRGNQLDTLPPLQGP-GQLRRLRLQGNPLWCGC 316
Score = 56 (24.8 bits), Expect = 2.6e-05, Sum P(3) = 2.6e-05
Identities = 27/127 (21%), Positives = 48/127 (37%)
Query: 176 LKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXX 235
L L N + +P +PH L +L L +E V + +F L L L L
Sbjct: 67 LDLQGNLLKVIPAAAFQGVPH--LTHLDLRHCEVELVAEGAFR-GLGRLLLLNLASNHLR 123
Query: 236 XXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFS 295
L +L + L AL L+L+ N + ++AF+ L
Sbjct: 124 ELPQEALDGLGSLRRLELEGNALEELRPGTFGALGALATLNLAHNALVYLPAMAFQGLLR 183
Query: 296 LKLVKIN 302
++ ++++
Sbjct: 184 VRWLRLS 190
Score = 54 (24.1 bits), Expect = 4.0e-05, Sum P(3) = 4.0e-05
Identities = 22/100 (22%), Positives = 37/100 (37%)
Query: 76 LRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKIS 135
LR L L N++ L L L + +N ++ ++ L L+ L L +
Sbjct: 208 LRRLSLHHNELQALPGPVLSQARGLARLELGHNPLTYAGEEDGLALPGLRELLLDGGALQ 267
Query: 136 VINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRI 175
+ AF L L L N + + L+ LR+
Sbjct: 268 ALGPRAFAHCPRLHTLDLRGNQLDTLPPLQGPGQLRRLRL 307
Score = 44 (20.5 bits), Expect = 5.4e-15, Sum P(3) = 5.4e-15
Identities = 7/14 (50%), Positives = 11/14 (78%)
Query: 514 CSSPPDIKGLEVKA 527
C++PP+ +G VKA
Sbjct: 701 CATPPNARGQRVKA 714
Score = 44 (20.5 bits), Expect = 5.2e-07, Sum P(3) = 5.2e-07
Identities = 25/105 (23%), Positives = 45/105 (42%)
Query: 344 LDLSGNNFSNIDSVAFKSLFSLKLVKINLIP-NLDSIDQRAFVDNIQLETVIINENMNLK 402
LDL N+F ++ AF L L V ++L + ++ A +L + +++N L
Sbjct: 430 LDLRRNHFPSVPRAAFPGLGHL--VSLHLQHCGIAELEAGALAGLGRLIYLYLSDNQ-LA 486
Query: 403 QLPSKLFQGNTNLKSVSLKGNSLSHLEASHF-PLERISFLDLSDN 446
L + +G L + L+ N + + L + L L DN
Sbjct: 487 GLSAAALEGAPRLGYLYLERNRFLQVPGAALRALPSLFSLHLQDN 531
Score = 39 (18.8 bits), Expect = 4.1e-08, Sum P(3) = 4.1e-08
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 504 SLTIVLNNLKC-SSPPDIKGLEVKAVPENSVHCE 536
SL + N L+ + P + LE+ + N HC+
Sbjct: 647 SLHLQKNQLRALPALPSLSQLELIDLSSNPFHCD 680
>UNIPROTKB|A6H701 [details] [associations]
symbol:LRRTM2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050808 "synapse organization" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 GeneTree:ENSGT00700000104056
HOGENOM:HOG000290681 HOVERGEN:HBG052362 CTD:26045 OMA:IRQCSMI
OrthoDB:EOG4PG60Z EMBL:DAAA02020406 EMBL:BC146061 IPI:IPI00709063
RefSeq:NP_001092847.1 UniGene:Bt.55901 Ensembl:ENSBTAT00000018866
GeneID:520949 KEGG:bta:520949 InParanoid:A6H701 NextBio:20873206
Uniprot:A6H701
Length = 516
Score = 220 (82.5 bits), Expect = 5.7e-15, P = 5.7e-15
Identities = 70/236 (29%), Positives = 114/236 (48%)
Query: 78 SLDLSV--NKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKIS 135
SL LS+ N I L F ++L L++ +N+IS + +D F+GL +LK L LS NKI
Sbjct: 63 SLGLSLRHNHITELERDQFASFSQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIF 122
Query: 136 VINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLP 195
+ T F ++L+ L LSFN ++ E+F L+ L+ L L +N + +P + +
Sbjct: 123 YLPNTTFTQLINLQNLDLSFNQLSSLHP-ELFYGLRKLQTLHLRSNSLRTIPVRLFWDC- 180
Query: 196 HQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXX 255
+SL +L L+ N + ++ N F L L L L + L +LH
Sbjct: 181 -RSLEFLDLSTNRLRSLARNGFA-GLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQW 238
Query: 256 XXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKI--NLIPNLDS 309
+ L LDL+GN ID F+++ +LK++ + N + +LDS
Sbjct: 239 NKISNLTCGMEWTWGTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNNKLNSLDS 294
Score = 211 (79.3 bits), Expect = 5.7e-14, P = 5.7e-14
Identities = 80/302 (26%), Positives = 130/302 (43%)
Query: 5 LTCIFLILALTKLNKAI---CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILREN 61
L I+ + + K+ A+ CP +C+C +KL C G VP + + LR N
Sbjct: 14 LAAIYAMSMVLKMLPALGMACPPKCRC--EKLLFYCDSQGFHSVPNTTDKGSLGLSLRHN 71
Query: 62 RISNVHYT-LSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKG 120
I+ + + + +L L L N+I+ + F+ KL L +S N+I L TF
Sbjct: 72 HITELERDQFASFSQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLPNTTFTQ 131
Query: 121 LKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDN 180
L L+ LDLS+N++S ++ F L+ L L N++ +F +SL L L
Sbjct: 132 LINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIP-VRLFWDCRSLEFLDLST 190
Query: 181 NQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXX 240
N++ + N + L L L+L N + T ++ + L++LHTL L
Sbjct: 191 NRLRSLARNGFAGLI--KLRELHLEHNQL-TKINFAHFLRLSSLHTLFLQWNKISNLTCG 247
Query: 241 XXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVK 300
T TL AI + L L + N +++DS SL SL V
Sbjct: 248 MEWTWGTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNNKLNSLDSKILNSLRSLTTVG 307
Query: 301 IN 302
++
Sbjct: 308 LS 309
Score = 199 (75.1 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 70/224 (31%), Positives = 101/224 (45%)
Query: 58 LRENRISNVHY-TLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKD 116
L N+IS V +L+ L LS NKI L + F L NL++S+N++S+L +
Sbjct: 92 LDHNQISTVKEDAFQGLYKLKELILSSNKIFYLPNTTFTQLINLQNLDLSFNQLSSLHPE 151
Query: 117 TFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRIL 176
F GL++L+TL L N + I F D LE L LS N + + F+ L LR L
Sbjct: 152 LFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEFLDLSTNRLRSLARNG-FAGLIKLREL 210
Query: 177 KLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXX 236
L++NQ+ + N L SLH L+L N I L +T L L L
Sbjct: 211 HLEHNQLTKI--NFAHFLRLSSLHTLFLQWNKISN-LTCGMEWTWGTLEKLDLTGNEIKA 267
Query: 237 XXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGN 280
T+ L ++ +K L+ L +L + LSGN
Sbjct: 268 IDLTVFETMPNLKILLMDNNKLNSLDSKILNSLRSLTTVGLSGN 311
Score = 139 (54.0 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 70/256 (27%), Positives = 105/256 (41%)
Query: 151 LILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIE 210
L L N+IT E + F+S L L LD+NQI V + L L L L+ N I
Sbjct: 66 LSLRHNHITELERDQ-FASFSQLTWLHLDHNQISTVKEDAFQGL--YKLKELILSSNKIF 122
Query: 211 TVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLS 270
+ + +F L NL L L LR L IP +
Sbjct: 123 YLPNTTFT-QLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCR 181
Query: 271 ALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQXXXXXXXXXXXXXXXXX 329
+L LDLS N ++ F L +KL +++L N L I+
Sbjct: 182 SLEFLDLSTNRLRSLARNGFAGL--IKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWN 239
Query: 330 AFS-LT-----PLGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRA 383
S LT GTL ++LDL+GN ID F+++ +LK++ ++ L+S+D +
Sbjct: 240 KISNLTCGMEWTWGTL--EKLDLTGNEIKAIDLTVFETMPNLKILLMDN-NKLNSLDSKI 296
Query: 384 FVDNIQLETVIINENM 399
L TV ++ N+
Sbjct: 297 LNSLRSLTTVGLSGNL 312
>UNIPROTKB|O43300 [details] [associations]
symbol:LRRTM2 "Leucine-rich repeat transmembrane neuronal
protein 2" species:9606 "Homo sapiens" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0042043 "neurexin family protein binding" evidence=IEA]
[GO:0050808 "synapse organization" evidence=IEA] [GO:0060076
"excitatory synapse" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 SMART:SM00013 InterPro:IPR025875
Pfam:PF12799 UniGene:Hs.656653 CleanEx:HS_LRRN2
HOGENOM:HOG000290681 HOVERGEN:HBG052362 EMBL:AY182026 EMBL:AB007876
EMBL:AK291064 EMBL:BC126408 EMBL:BC126410 EMBL:BC143926
IPI:IPI00023576 RefSeq:NP_056379.1 ProteinModelPortal:O43300
SMR:O43300 STRING:O43300 PhosphoSite:O43300 PRIDE:O43300
DNASU:26045 Ensembl:ENST00000274711 GeneID:26045 KEGG:hsa:26045
UCSC:uc011cyz.1 CTD:26045 GeneCards:GC05M138205 HGNC:HGNC:19409
HPA:HPA017323 MIM:610868 neXtProt:NX_O43300 PharmGKB:PA134993038
InParanoid:O43300 OMA:IRQCSMI OrthoDB:EOG4PG60Z GenomeRNAi:26045
NextBio:47883 ArrayExpress:O43300 Bgee:O43300 CleanEx:HS_LRRTM2
Genevestigator:O43300 Uniprot:O43300
Length = 516
Score = 220 (82.5 bits), Expect = 5.7e-15, P = 5.7e-15
Identities = 70/236 (29%), Positives = 114/236 (48%)
Query: 78 SLDLSV--NKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKIS 135
SL LS+ N I L F ++L L++ +N+IS + +D F+GL +LK L LS NKI
Sbjct: 63 SLGLSLRHNHITELERDQFASFSQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIF 122
Query: 136 VINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLP 195
+ T F ++L+ L LSFN ++ E+F L+ L+ L L +N + +P + +
Sbjct: 123 YLPNTTFTQLINLQNLDLSFNQLSSLHP-ELFYGLRKLQTLHLRSNSLRTIPVRLFWDC- 180
Query: 196 HQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXX 255
+SL +L L+ N + ++ N F L L L L + L +LH
Sbjct: 181 -RSLEFLDLSTNRLRSLARNGFA-GLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQW 238
Query: 256 XXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKI--NLIPNLDS 309
+ L LDL+GN ID F+++ +LK++ + N + +LDS
Sbjct: 239 NKISNLTCGMEWTWGTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNNKLNSLDS 294
Score = 211 (79.3 bits), Expect = 5.7e-14, P = 5.7e-14
Identities = 80/302 (26%), Positives = 130/302 (43%)
Query: 5 LTCIFLILALTKLNKAI---CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILREN 61
L I+ + + K+ A+ CP +C+C +KL C G VP + + LR N
Sbjct: 14 LAAIYAMSMVLKMLPALGMACPPKCRC--EKLLFYCDSQGFHSVPNATDKGSLGLSLRHN 71
Query: 62 RISNVHYT-LSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKG 120
I+ + + + +L L L N+I+ + F+ KL L +S N+I L TF
Sbjct: 72 HITELERDQFASFSQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLPNTTFTQ 131
Query: 121 LKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDN 180
L L+ LDLS+N++S ++ F L+ L L N++ +F +SL L L
Sbjct: 132 LINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIP-VRLFWDCRSLEFLDLST 190
Query: 181 NQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXX 240
N++ + N + L L L+L N + T ++ + L++LHTL L
Sbjct: 191 NRLRSLARNGFAGLI--KLRELHLEHNQL-TKINFAHFLRLSSLHTLFLQWNKISNLTCG 247
Query: 241 XXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVK 300
T TL AI + L L + N +++DS SL SL V
Sbjct: 248 MEWTWGTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNNKLNSLDSKILNSLRSLTTVG 307
Query: 301 IN 302
++
Sbjct: 308 LS 309
Score = 199 (75.1 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 70/224 (31%), Positives = 101/224 (45%)
Query: 58 LRENRISNVHY-TLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKD 116
L N+IS V +L+ L LS NKI L + F L NL++S+N++S+L +
Sbjct: 92 LDHNQISTVKEDAFQGLYKLKELILSSNKIFYLPNTTFTQLINLQNLDLSFNQLSSLHPE 151
Query: 117 TFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRIL 176
F GL++L+TL L N + I F D LE L LS N + + F+ L LR L
Sbjct: 152 LFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEFLDLSTNRLRSLARNG-FAGLIKLREL 210
Query: 177 KLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXX 236
L++NQ+ + N L SLH L+L N I L +T L L L
Sbjct: 211 HLEHNQLTKI--NFAHFLRLSSLHTLFLQWNKISN-LTCGMEWTWGTLEKLDLTGNEIKA 267
Query: 237 XXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGN 280
T+ L ++ +K L+ L +L + LSGN
Sbjct: 268 IDLTVFETMPNLKILLMDNNKLNSLDSKILNSLRSLTTVGLSGN 311
Score = 139 (54.0 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 70/256 (27%), Positives = 105/256 (41%)
Query: 151 LILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIE 210
L L N+IT E + F+S L L LD+NQI V + L L L L+ N I
Sbjct: 66 LSLRHNHITELERDQ-FASFSQLTWLHLDHNQISTVKEDAFQGL--YKLKELILSSNKIF 122
Query: 211 TVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLS 270
+ + +F L NL L L LR L IP +
Sbjct: 123 YLPNTTFT-QLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCR 181
Query: 271 ALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQXXXXXXXXXXXXXXXXX 329
+L LDLS N ++ F L +KL +++L N L I+
Sbjct: 182 SLEFLDLSTNRLRSLARNGFAGL--IKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWN 239
Query: 330 AFS-LT-----PLGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRA 383
S LT GTL ++LDL+GN ID F+++ +LK++ ++ L+S+D +
Sbjct: 240 KISNLTCGMEWTWGTL--EKLDLTGNEIKAIDLTVFETMPNLKILLMDN-NKLNSLDSKI 296
Query: 384 FVDNIQLETVIINENM 399
L TV ++ N+
Sbjct: 297 LNSLRSLTTVGLSGNL 312
>UNIPROTKB|G5E9B3 [details] [associations]
symbol:LGR4 "Leucine-rich repeat-containing G
protein-coupled receptor 4, isoform CRA_a" species:9606 "Homo
sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016500 "protein-hormone receptor activity" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 EMBL:CH471064
InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0016500 EMBL:AC090597 UniGene:Hs.502176
HGNC:HGNC:13299 ChiTaRS:LGR4 EMBL:AC100771
ProteinModelPortal:G5E9B3 SMR:G5E9B3 Ensembl:ENST00000389858
ArrayExpress:G5E9B3 Bgee:G5E9B3 Uniprot:G5E9B3
Length = 927
Score = 224 (83.9 bits), Expect = 6.0e-15, P = 6.0e-15
Identities = 105/410 (25%), Positives = 168/410 (40%)
Query: 21 ICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVH-YTLSFYIELRSL 79
+C + C C D C+ GL VP L+ Q + L N +S +H LS EL+ L
Sbjct: 28 LCAAPCSC-DGDRRVDCSGKGLTAVPEGLSAFTQALQLAGNDLSFIHPKALSGLKELKVL 86
Query: 80 DLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINK 139
L N++ + S + L +L + N I+++ +D+F+GL +L+ L L N ++ +
Sbjct: 87 TLQNNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSLTEVPV 146
Query: 140 TAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNV---LSNLPH 196
+ L+ L L+ N I+ D F++L SL +L L NN+I + + L NL
Sbjct: 147 HPLSNLPTLQALTLALNKISSIPDFA-FTNLSSLVVLHLHNNKIRSLSQHCFDGLDNLET 205
Query: 197 QSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXX 256
L+Y L E + + + P +L L + LRT+H
Sbjct: 206 LDLNYNNLGE-FPQAI--KALP-SLKELGFHSNSISVIPDGAFDGNPLLRTIHLYDNPLS 261
Query: 257 XXXAIPTKQLSKLSALVNLDLSG-NNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQXXX 315
LS L +LV S F N+ +L KI+ IPN +Q
Sbjct: 262 FVGNSAFHNLSDLHSLVIRGASMVQQFPNLTGTVHLESLTLTGTKISSIPNNLCQEQKML 321
Query: 316 XXXXXXXXXXXXXXAFSLTPLGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKI--NLI 373
+F+ G + + L N I F+ L SL+++ + NLI
Sbjct: 322 RTLDLSYNNIRDLPSFN----GCHALEEISLQRNQIYQIKEGTFQGLISLRILDLSRNLI 377
Query: 374 PNLDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGN 423
+ S RAF L I N +++ +L S +G L + L GN
Sbjct: 378 HEIHS---RAFAT---LGP-ITNLDVSFNELTSFPTEGLNGLNQLKLVGN 420
Score = 196 (74.1 bits), Expect = 6.9e-12, P = 6.9e-12
Identities = 97/353 (27%), Positives = 151/353 (42%)
Query: 103 LNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYF- 161
L ++ N++S + GLKELK L L N++ + A R L+ L L N+IT
Sbjct: 62 LQLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHITSVP 121
Query: 162 EDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFT- 220
EDS F L LR L LD+N + +VP + LSNLP +L L L N I ++ D F FT
Sbjct: 122 EDS--FEGLVQLRHLWLDDNSLTEVPVHPLSNLP--TLQALTLALNKISSIPD--FAFTN 175
Query: 221 LTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGN 280
L++L L L L L P + + L +L L N
Sbjct: 176 LSSLVVLHLHNNKIRSLSQHCFDGLDNLETLDLNYNNLGEFP-QAIKALPSLKELGFHSN 234
Query: 281 NFSNIDSVAFKSLFSLKLVKI--NLIPNL-DSIDQXXXXXXXXXXXXXXXXXAF-SLTPL 336
+ S I AF L+ + + N + + +S F +LT
Sbjct: 235 SISVIPDGAFDGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHSLVIRGASMVQQFPNLT-- 292
Query: 337 GTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFVDNIQLETVIIN 396
GT+ + L L+G S+I + + L+ + ++ N+ D +F LE + +
Sbjct: 293 GTVHLESLTLTGTKISSIPNNLCQEQKMLRTLDLSY-NNIR--DLPSFNGCHALEEISLQ 349
Query: 397 ENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPL 448
N + Q+ FQG +L+ + L N + + + F L I+ LD+S N L
Sbjct: 350 RNQ-IYQIKEGTFQGLISLRILDLSRNLIHEIHSRAFATLGPITNLDVSFNEL 401
Score = 161 (61.7 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 79/325 (24%), Positives = 140/325 (43%)
Query: 52 EVQTIILRENRISNVH-YTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEI 110
+++ + L +N ++ V + LS L++L L++NKI+ + F + L+ L++ N+I
Sbjct: 130 QLRHLWLDDNSLTEVPVHPLSNLPTLQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKI 189
Query: 111 SALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSL 170
+LS+ F GL L+TLDL+YN + + A + L+ L N+I+ D F
Sbjct: 190 RSLSQHCFDGLDNLETLDLNYNNLGEFPQ-AIKALPSLKELGFHSNSISVIPDGA-FDGN 247
Query: 171 KSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLN-ENLIETVLDNSFP-FTLT-NLHTL 227
LR + L +N + V N+ NL LH L + ++++ FP T T +L +L
Sbjct: 248 PLLRTIHLYDNPLSFVGNSAFHNL--SDLHSLVIRGASMVQ-----QFPNLTGTVHLESL 300
Query: 228 ALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDS 287
L + L +P+ + AL + L N I
Sbjct: 301 TLTGTKISSIPNNLCQEQKMLRTLDLSYNNIRDLPS--FNGCHALEEISLQRNQIYQIKE 358
Query: 288 VAFKSLFSLKLVKI--NLIPNLDSIDQXXXXXXXXXXXXXXXXXAFSLTPLGTLKCDRLD 345
F+ L SL+++ + NLI + S +F L L ++L
Sbjct: 359 GTFQGLISLRILDLSRNLIHEIHSRAFATLGPITNLDVSFNELTSFPTEGLNGL--NQLK 416
Query: 346 LSGNNFSNIDSVAFKSLFSLKLVKI 370
L GN F +++A K +L+ + +
Sbjct: 417 LVGN-FKLKEALAAKDFVNLRSLSV 440
>UNIPROTKB|F1RP63 [details] [associations]
symbol:SLITRK6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007409 "axonogenesis" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007409 GeneTree:ENSGT00680000099859 CTD:84189
OMA:YFELKAN EMBL:CU466998 RefSeq:XP_003482968.1
Ensembl:ENSSSCT00000010401 GeneID:100153917 KEGG:ssc:100153917
Uniprot:F1RP63
Length = 842
Score = 163 (62.4 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 59/188 (31%), Positives = 84/188 (44%)
Query: 15 TKLNKAICPSRCQC---FDQKLEASCTDAGLEVVPIQLNPEVQT---IILRENRISNV-H 67
T+L CP C C L C + +E + L P Q +IL N I +
Sbjct: 324 TQLPGPYCPIPCNCKVLSPSGLLIHCQERNIESLS-DLKPPPQNPRKLILAGNIIHTLMK 382
Query: 68 YTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTL 127
Y L+ Y L L L N+I VL +F +L L ++ N ++ LS F GL L+ L
Sbjct: 383 YDLAEYFTLEMLHLGNNRIEVLEEGSFMNLTRLQKLYLNGNHLTKLSGGMFLGLHNLEYL 442
Query: 128 DLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVP 187
L YN + I F L++L L+ NN+ IFS + RI L NQ +P
Sbjct: 443 YLEYNGVKEILPGTFNPMPKLKVLYLN-NNLLQVLPPHIFSGVPLTRI-NLKTNQFTHLP 500
Query: 188 -NNVLSNL 194
+N+L +L
Sbjct: 501 VSNILDDL 508
Score = 155 (59.6 bits), Expect = 6.7e-15, Sum P(2) = 6.7e-15
Identities = 40/134 (29%), Positives = 71/134 (52%)
Query: 79 LDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVIN 138
L L N + +L +++F +++++ +N I+ + F GL LK L +++N + ++
Sbjct: 71 LSLLNNGLTMLHANDFSGLTNAISIHLGFNNIADIETGAFNGLGLLKKLHINHNSLEILK 130
Query: 139 KTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQS 198
+ F +LE L N IT E S FS L L++L L++N I +P NV +P
Sbjct: 131 EDTFHGLENLEFLQADNNFITVIEPSA-FSKLNRLKVLILNDNAIESLPPNVFRFVP--- 186
Query: 199 LHYLYLNENLIETV 212
L +L L N ++T+
Sbjct: 187 LTHLDLRGNQLQTL 200
Score = 129 (50.5 bits), Expect = 4.6e-12, Sum P(2) = 4.6e-12
Identities = 38/124 (30%), Positives = 65/124 (52%)
Query: 102 NLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYF 161
+L++ N ++ L + F GL ++ L +N I+ I AF L+ L ++ N++
Sbjct: 70 HLSLLNNGLTMLHANDFSGLTNAISIHLGFNNIADIETGAFNGLGLLKKLHINHNSLEIL 129
Query: 162 EDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFT- 220
++ + F L++L L+ DNN I + + S L L L LN+N IE++ N F F
Sbjct: 130 KE-DTFHGLENLEFLQADNNFITVIEPSAFSKL--NRLKVLILNDNAIESLPPNVFRFVP 186
Query: 221 LTNL 224
LT+L
Sbjct: 187 LTHL 190
Score = 125 (49.1 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 48/172 (27%), Positives = 81/172 (47%)
Query: 22 CPSRCQCF--DQKLEASCTDAGLEVVPIQLN-PEVQT--IILRENRISNVHYT-LSFYIE 75
C S C C D + +C + ++ + Q++ P + + L N ++ +H S
Sbjct: 33 CDSLCNCEEKDGTMLINCEEKDIKKLS-QISVPASRPFHLSLLNNGLTMLHANDFSGLTN 91
Query: 76 LRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKIS 135
S+ L N I + + F L L+I++N + L +DTF GL+ L+ L N I+
Sbjct: 92 AISIHLGFNNIADIETGAFNGLGLLKKLHINHNSLEILKEDTFHGLENLEFLQADNNFIT 151
Query: 136 VINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVP 187
VI +AF L++LIL+ N I + +F + L L L NQ+ +P
Sbjct: 152 VIEPSAFSKLNRLKVLILNDNAIESLPPN-VFRFVP-LTHLDLRGNQLQTLP 201
Score = 119 (46.9 bits), Expect = 6.7e-15, Sum P(2) = 6.7e-15
Identities = 32/116 (27%), Positives = 59/116 (50%)
Query: 340 KCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFVDNIQLETVIINENM 399
+ +L L+GN+ + + F L +L+ + + + I F +L+ + +N N+
Sbjct: 414 RLQKLYLNGNHLTKLSGGMFLGLHNLEYLYLEY-NGVKEILPGTFNPMPKLKVLYLNNNL 472
Query: 400 NLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHF--PLERISFLDLSDNPLHCDCN 453
L+ LP +F G L ++LK N +HL S+ L+ ++ +DL DNP C C+
Sbjct: 473 -LQVLPPHIFSG-VPLTRINLKTNQFTHLPVSNILDDLDLLTQIDLEDNPWDCSCD 526
Score = 87 (35.7 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 40/158 (25%), Positives = 62/158 (39%)
Query: 133 KISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLS 192
K+S I+ A R HL LL N +T ++ FS L + + L N I D+ +
Sbjct: 57 KLSQISVPASRP-FHLSLLN---NGLTMLHAND-FSGLTNAISIHLGFNNIADIETGAFN 111
Query: 193 NLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXX 252
L L L++N N +E + +++F L NL L L L
Sbjct: 112 GLG--LLKKLHINHNSLEILKEDTF-HGLENLEFLQADNNFITVIEPSAFSKLNRLKVLI 168
Query: 253 XXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAF 290
++P + + L +LDL GN + V F
Sbjct: 169 LNDNAIESLPPN-VFRFVPLTHLDLRGNQLQTLPYVGF 205
Score = 75 (31.5 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 38/197 (19%), Positives = 89/197 (45%)
Query: 343 RLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFVDNIQLETVIINENMNLK 402
+L L+GN + F+L+++ + ++ +++ +F++ +L+ + +N N +L
Sbjct: 369 KLILAGNIIHTLMKYDLAEYFTLEMLHLGN-NRIEVLEEGSFMNLTRLQKLYLNGN-HLT 426
Query: 403 QLPSKLFQGNTNLKSVSLKGNSLSHLEASHF-PLERISFLDLSDN-----PLHCDCNXXX 456
+L +F G NL+ + L+ N + + F P+ ++ L L++N P H
Sbjct: 427 KLSGGMFLGLHNLEYLYLEYNGVKEILPGTFNPMPKLKVLYLNNNLLQVLPPHIFSGVPL 486
Query: 457 XXXXXXXXXKSTMETTTVAYEMTSNTSI----SP-GTTTEAQRVDRIIKNNHSLTIVLNN 511
+ + + + ++ T I +P + + + + I+ S IV +
Sbjct: 487 TRINLKTNQFTHLPVSNILDDLDLLTQIDLEDNPWDCSCDLVGLQQWIQKL-SKNIVTDE 545
Query: 512 LKCSSPPDIKGLEVKAV 528
+ C+SP + E+KA+
Sbjct: 546 ILCTSPEHLDKKELKAL 562
Score = 54 (24.1 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 267 SKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
S L+ +++ L NN ++I++ AF L LK + IN
Sbjct: 87 SGLTNAISIHLGFNNIADIETGAFNGLGLLKKLHIN 122
Score = 45 (20.9 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 8/26 (30%), Positives = 16/26 (61%)
Query: 508 VLNNLKCSSPPDIKGLEVKAVPENSV 533
V+ ++ C+SPP KG + + + S+
Sbjct: 243 VIGDVVCNSPPFFKGSILSRLKKESI 268
Score = 37 (18.1 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 269 LSALVNLDLSGNNFSNIDSVAFKSLFSLK 297
L+ L L L+GN+ + + F L +L+
Sbjct: 412 LTRLQKLYLNGNHLTKLSGGMFLGLHNLE 440
>UNIPROTKB|F1RQ61 [details] [associations]
symbol:SLITRK2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007409 "axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 GeneTree:ENSGT00680000099775
CTD:84631 OMA:LQADYNY EMBL:FP236785 RefSeq:XP_003135487.1
Ensembl:ENSSSCT00000013911 Ensembl:ENSSSCT00000034054
Ensembl:ENSSSCT00000034972 Ensembl:ENSSSCT00000035609
GeneID:100511615 KEGG:ssc:100511615 Uniprot:F1RQ61
Length = 849
Score = 154 (59.3 bits), Expect = 7.0e-15, Sum P(2) = 7.0e-15
Identities = 56/199 (28%), Positives = 94/199 (47%)
Query: 16 KLNKAICPSRCQCFDQK--LEASCTDAGLEVVPIQLNPE--VQTIILRENRISNVHYTLS 71
K K IC RC C +++ L +C + G V + P+ + + L N ++ + Y
Sbjct: 23 KTAKDICKIRCLCEEKENVLNINCENKGFTTVSLLQPPQYRIYQLFLNGNLLTRL-YPNE 81
Query: 72 F--YIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDL 129
F Y +L L N + + + F L L+++ N++ L +DTF GL+ L+ L
Sbjct: 82 FVNYSNAVTLHLGNNGLQEIRTGAFSGLKTLKRLHLNNNKLEVLREDTFLGLESLEYLQA 141
Query: 130 SYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVP-N 188
YN IS I AF L++LIL+ +N+ S +F + L L L N++ +P
Sbjct: 142 DYNYISAIEAGAFSKLNKLKVLILN-DNLLLSLPSNVFRFVL-LTHLDLRGNRLKVMPFA 199
Query: 189 NVLSNLPHQSLHYLYLNEN 207
VL ++ + + L EN
Sbjct: 200 GVLEHIG--GIMEIQLEEN 216
Score = 148 (57.2 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 55/182 (30%), Positives = 77/182 (42%)
Query: 22 CPSRCQCFDQK----LEASCTDAGL-EVVPIQLNP-EVQTIILRENRISNVHYT-LSFYI 74
CPS C C Q L +C + + +Q P + + L N + V+ L Y
Sbjct: 344 CPSSCVCTSQSSDNGLNVNCQERKFTNISDLQPKPTSPKKLYLTGNYLQTVYKNDLLEYS 403
Query: 75 ELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKI 134
L L L N+I V+ F L L ++ N + L F GL+ L+ L L YN I
Sbjct: 404 SLDLLHLGNNRIAVIQEGAFTNLTSLRRLYLNGNYLEVLYPAMFDGLQSLQYLYLEYNVI 463
Query: 135 SVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVP-NNVLSN 193
I F ++L+LL L+ N + D+ IF R L L NN +P VL
Sbjct: 464 KEIKPLTFDALINLQLLFLNNNLLRSLPDN-IFGGTALTR-LNLRNNHFSHLPVKGVLDQ 521
Query: 194 LP 195
LP
Sbjct: 522 LP 523
Score = 120 (47.3 bits), Expect = 7.0e-15, Sum P(2) = 7.0e-15
Identities = 40/127 (31%), Positives = 68/127 (53%)
Query: 332 SLTPLGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKI--NLIPNLDSIDQRAFVDNIQ 389
+ T L +L+ RL L+GN + F L SL+ + + N+I + + A + N+Q
Sbjct: 422 AFTNLTSLR--RLYLNGNYLEVLYPAMFDGLQSLQYLYLEYNVIKEIKPLTFDALI-NLQ 478
Query: 390 LETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFPLERI-SFL--DLSDN 446
L + +N N+ L+ LP +F G T L ++L+ N SHL L+++ +F+ DL +N
Sbjct: 479 L--LFLNNNL-LRSLPDNIF-GGTALTRLNLRNNHFSHLPVKGV-LDQLPAFIQIDLQEN 533
Query: 447 PLHCDCN 453
P C C+
Sbjct: 534 PWDCTCD 540
Score = 107 (42.7 bits), Expect = 7.6e-10, Sum P(2) = 7.6e-10
Identities = 38/129 (29%), Positives = 59/129 (45%)
Query: 97 QNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFN 156
Q ++ L ++ N ++ L + F TL L N + I AF L+ L L+ N
Sbjct: 61 QYRIYQLFLNGNLLTRLYPNEFVNYSNAVTLHLGNNGLQEIRTGAFSGLKTLKRLHLNNN 120
Query: 157 NITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNS 216
+ + + F L+SL L+ D N I + S L L L LN+NL+ ++ N
Sbjct: 121 KLEVLRE-DTFLGLESLEYLQADYNYISAIEAGAFSKL--NKLKVLILNDNLLLSLPSNV 177
Query: 217 FPFTL-TNL 224
F F L T+L
Sbjct: 178 FRFVLLTHL 186
Score = 74 (31.1 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10
Identities = 29/106 (27%), Positives = 50/106 (47%)
Query: 342 DRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFVDNIQ-LETVIINENMN 400
D L L N + I AF +L SL+ + +N N + A D +Q L+ + + N+
Sbjct: 406 DLLHLGNNRIAVIQEGAFTNLTSLRRLYLN--GNYLEVLYPAMFDGLQSLQYLYLEYNV- 462
Query: 401 LKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFPLERISFLDLSDN 446
+K++ F NL+ + L N L L + F ++ L+L +N
Sbjct: 463 IKEIKPLTFDALINLQLLFLNNNLLRSLPDNIFGGTALTRLNLRNN 508
Score = 71 (30.1 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 27/108 (25%), Positives = 41/108 (37%)
Query: 195 PHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXX 254
P ++ L+LN NL+ + N F +N TL L L+TL
Sbjct: 60 PQYRIYQLFLNGNLLTRLYPNEF-VNYSNAVTLHLGNNGLQEIRTGAFSGLKTLKRLHLN 118
Query: 255 XXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
+ L +L L N S I++ AF L LK++ +N
Sbjct: 119 NNKLEVLREDTFLGLESLEYLQADYNYISAIEAGAFSKLNKLKVLILN 166
Score = 50 (22.7 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 35/160 (21%), Positives = 66/160 (41%)
Query: 139 KTAFRDTLHLELLILSFNNITYFE-DSEIFSSLKSLRILKLDNNQILDVPNNVLSNL-PH 196
KTA +D + L N+ +++ F+++ L+ + Q+ + N+L+ L P+
Sbjct: 23 KTA-KDICKIRCLCEEKENVLNINCENKGFTTVSLLQPPQYRIYQLF-LNGNLLTRLYPN 80
Query: 197 QSLHY-----LYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXX 251
+ ++Y L+L N ++ + +F L L L L + L +L
Sbjct: 81 EFVNYSNAVTLHLGNNGLQEIRTGAFS-GLKTLKRLHLNNNKLEVLREDTFLGLESLEYL 139
Query: 252 XXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFK 291
AI SKL+ L L L+ N ++ S F+
Sbjct: 140 QADYNYISAIEAGAFSKLNKLKVLILNDNLLLSLPSNVFR 179
>MGI|MGI:2144814 [details] [associations]
symbol:Lrfn5 "leucine rich repeat and fibronectin type III
domain containing 5" species:10090 "Mus musculus" [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001611 InterPro:IPR003961
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450
MGI:MGI:2144814 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 MEROPS:I43.001
InterPro:IPR026906 Pfam:PF13306 HOGENOM:HOG000237343
HOVERGEN:HBG052352 GeneTree:ENSGT00660000095307 CTD:145581
eggNOG:NOG249839 KO:K16358 OMA:NAQCCKA OrthoDB:EOG4X6C81
InterPro:IPR026879 PANTHER:PTHR24373:SF3 EMBL:AK034245
EMBL:AK048443 EMBL:AK220546 EMBL:BC052038 IPI:IPI00226604
IPI:IPI00227586 RefSeq:NP_848829.2 UniGene:Mm.28802
ProteinModelPortal:Q8BXA0 SMR:Q8BXA0 STRING:Q8BXA0
PhosphoSite:Q8BXA0 PaxDb:Q8BXA0 PRIDE:Q8BXA0
Ensembl:ENSMUST00000055815 Ensembl:ENSMUST00000119481 GeneID:238205
KEGG:mmu:238205 UCSC:uc007nqm.1 UCSC:uc007nqn.1 NextBio:383687
Bgee:Q8BXA0 Genevestigator:Q8BXA0 Uniprot:Q8BXA0
Length = 719
Score = 226 (84.6 bits), Expect = 8.0e-15, Sum P(2) = 8.0e-15
Identities = 62/197 (31%), Positives = 95/197 (48%)
Query: 1 MNYFLTCIFLILALTKLNKAICPSRCQC--FDQKLEASCTDAGLEVVPIQLNPEVQTIIL 58
M FL +FLI + ICP RC C L C GL VP ++ + L
Sbjct: 1 MEKFLFYLFLIGIAVRAQ--ICPKRCVCQILSPNLATLCAKKGLLFVPPNIDRRTVELRL 58
Query: 59 RENRISNV-HYTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDT 117
+N ++N+ + L L LS N I+ + H F L L+++ N ++ ++ D
Sbjct: 59 ADNFVTNIKRKDFANMTSLVDLTLSRNTISFITPHAFADLRNLRALHLNSNRLTKITNDM 118
Query: 118 FKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILK 177
F GL L L L+ N++++I+ TAF D LE L LS+NN+ + + SL L
Sbjct: 119 FSGLSNLHHLILNNNQLTLISSTAFDDVFALEELDLSYNNLETIPWDAV-EKMVSLHTLS 177
Query: 178 LDNNQILDVPNNVLSNL 194
LD+N I ++P S+L
Sbjct: 178 LDHNMIDNIPKGTFSHL 194
Score = 41 (19.5 bits), Expect = 8.0e-15, Sum P(2) = 8.0e-15
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 514 CSSPPDIKGLEVKAVPENSVHCE 536
C+SP + G ++PE CE
Sbjct: 263 CASPALLTGRYFWSIPEEEFLCE 285
>RGD|1309357 [details] [associations]
symbol:Lrfn5 "leucine rich repeat and fibronectin type III
domain containing 5" species:10116 "Rattus norvegicus" [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR001611
InterPro:IPR003961 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS50853 PROSITE:PS51450 RGD:1309357 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 InterPro:IPR026906
Pfam:PF13306 EMBL:CH473947 CTD:145581 KO:K16358 OrthoDB:EOG4X6C81
InterPro:IPR026879 PANTHER:PTHR24373:SF3 IPI:IPI00367330
RefSeq:NP_001101494.1 UniGene:Rn.224998 ProteinModelPortal:D4A1J9
Ensembl:ENSRNOT00000007520 GeneID:314164 KEGG:rno:314164
NextBio:667230 ArrayExpress:D4A1J9 Uniprot:D4A1J9
Length = 719
Score = 226 (84.6 bits), Expect = 8.0e-15, Sum P(2) = 8.0e-15
Identities = 62/197 (31%), Positives = 95/197 (48%)
Query: 1 MNYFLTCIFLILALTKLNKAICPSRCQC--FDQKLEASCTDAGLEVVPIQLNPEVQTIIL 58
M FL +FLI + ICP RC C L C GL VP ++ + L
Sbjct: 1 MEKFLFYLFLIGIAVRAQ--ICPKRCVCQILSPNLATLCAKKGLLFVPPNIDRRTVELRL 58
Query: 59 RENRISNV-HYTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDT 117
+N ++N+ + L L LS N I+ + H F L L+++ N ++ ++ D
Sbjct: 59 ADNFVTNIKRKDFANMTSLVDLTLSRNTISFITPHAFADLRNLRALHLNSNRLTKITNDM 118
Query: 118 FKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILK 177
F GL L L L+ N++++I+ TAF D LE L LS+NN+ + + SL L
Sbjct: 119 FSGLSNLHHLILNNNQLTLISSTAFDDVFALEELDLSYNNLETIPWDAV-EKMVSLHTLS 177
Query: 178 LDNNQILDVPNNVLSNL 194
LD+N I ++P S+L
Sbjct: 178 LDHNMIDNIPKGTFSHL 194
Score = 41 (19.5 bits), Expect = 8.0e-15, Sum P(2) = 8.0e-15
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 514 CSSPPDIKGLEVKAVPENSVHCE 536
C+SP + G ++PE CE
Sbjct: 263 CASPALLTGRYFWSIPEEEFLCE 285
>UNIPROTKB|P23515 [details] [associations]
symbol:OMG "Oligodendrocyte-myelin glycoprotein"
species:9606 "Homo sapiens" [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0031225 "anchored to membrane" evidence=IEA]
[GO:0031102 "neuron projection regeneration" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0048683
"regulation of collateral sprouting of intact axon in response to
injury" evidence=IEA] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0048011 "neurotrophin TRK receptor signaling pathway"
evidence=TAS] [GO:0050770 "regulation of axonogenesis"
evidence=TAS] [GO:0050771 "negative regulation of axonogenesis"
evidence=TAS] InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005886
Reactome:REACT_111102 GO:GO:0048011
Pathway_Interaction_DB:p75ntrpathway GO:GO:0031225 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 GO:GO:0007155 GO:GO:0031102
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 InterPro:IPR025875
Pfam:PF12799 EMBL:CH471147 GO:GO:0050771 EMBL:M63623 EMBL:X57436
EMBL:X51694 EMBL:BC018050 IPI:IPI00295832 PIR:A36688
RefSeq:NP_002535.3 UniGene:Hs.113874 ProteinModelPortal:P23515
SMR:P23515 STRING:P23515 PhosphoSite:P23515 DMDM:129122
PaxDb:P23515 PeptideAtlas:P23515 PRIDE:P23515 DNASU:4974
Ensembl:ENST00000247271 GeneID:4974 KEGG:hsa:4974 UCSC:uc002hgj.3
CTD:4974 GeneCards:GC17M029621 HGNC:HGNC:8135 HPA:HPA008206
HPA:HPA012693 MIM:164345 neXtProt:NX_P23515 PharmGKB:PA31922
HOGENOM:HOG000115267 HOVERGEN:HBG007868 InParanoid:P23515 KO:K16666
OMA:SSNKLWT OrthoDB:EOG4ZKJMC PhylomeDB:P23515 GenomeRNAi:4974
NextBio:19146 Bgee:P23515 CleanEx:HS_OMG Genevestigator:P23515
GermOnline:ENSG00000126861 GO:GO:0048683 Uniprot:P23515
Length = 440
Score = 217 (81.4 bits), Expect = 8.0e-15, P = 8.0e-15
Identities = 64/213 (30%), Positives = 104/213 (48%)
Query: 7 CIFLILALTKLNKAICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNV 66
C+F++L LT ICP +C C ++ C+ L +P L + + L N +++
Sbjct: 11 CLFILLFLTPGILCICPLQCICTERHRHVDCSGRNLSTLPSGLQENIIHLNLSYNHFTDL 70
Query: 67 HYTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKT 126
H L+ Y LR+LD+S N++ L +H L N++ + N I L K LK
Sbjct: 71 HNQLTQYTNLRTLDISNNRLESLPAH---LPRSLWNMSAANNNIKLLDKSDTAYQWNLKY 127
Query: 127 LDLSYNKISVINKTAFRDTLH-LELLILSFNNITYFEDSEIFSSLKS-LRILKLDNNQIL 184
LD+S N + + ++TL LE+L LS N + + +++ S L I+ L NN +
Sbjct: 128 LDVSKNMLEKV--VLIKNTLRSLEVLNLSSNKLW-----TVPTNMPSKLHIVDLSNNSLT 180
Query: 185 DVPNNVLSNLPHQSLHYLYLNENLIETVLDNSF 217
+ L NL + L +LYL+ N + D SF
Sbjct: 181 QILPGTLINLTN--LTHLYLHNNKFTFIPDQSF 211
>UNIPROTKB|G3N2N1 [details] [associations]
symbol:SLITRK2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007409 "axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 GeneTree:ENSGT00680000099775
CTD:84631 OMA:LQADYNY EMBL:DAAA02067944 RefSeq:XP_002699667.1
RefSeq:XP_591589.3 UniGene:Bt.78166 Ensembl:ENSBTAT00000057033
GeneID:540117 KEGG:bta:540117 NextBio:20878426 Uniprot:G3N2N1
Length = 844
Score = 153 (58.9 bits), Expect = 8.8e-15, Sum P(2) = 8.8e-15
Identities = 56/199 (28%), Positives = 94/199 (47%)
Query: 16 KLNKAICPSRCQCFDQK--LEASCTDAGLEVVPIQLNPE--VQTIILRENRISNVHYTLS 71
K K IC RC C +++ L +C + G V + P+ + + L N ++ + Y
Sbjct: 23 KTAKDICKIRCLCEEKENVLNINCENKGFTTVSLLQPPQYRIYQLFLNGNLLTRL-YPNE 81
Query: 72 F--YIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDL 129
F Y +L L N + + + F L L+++ N++ L +DTF GL+ L+ L
Sbjct: 82 FVNYSNAVTLHLGNNGLQEIRTGAFSGLKTLKRLHLNNNKLEVLREDTFLGLESLEYLQA 141
Query: 130 SYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVP-N 188
YN IS I AF L++LIL+ +N+ S +F + L L L N++ +P
Sbjct: 142 DYNYISAIEAGAFSKLNKLKVLILN-DNLLLSLPSNVFRFVL-LTHLDLRGNRLKLMPFA 199
Query: 189 NVLSNLPHQSLHYLYLNEN 207
VL ++ + + L EN
Sbjct: 200 GVLEHIG--GIMEIQLEEN 216
Score = 146 (56.5 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 55/182 (30%), Positives = 77/182 (42%)
Query: 22 CPSRCQCFDQK----LEASCTDAGL-EVVPIQLNP-EVQTIILRENRISNVHYT-LSFYI 74
CPS C C Q L +C + + +Q P + + L N + V+ L Y
Sbjct: 340 CPSSCVCTSQSSDNGLNVNCQERKFTNISDLQPKPTSPKKLYLTGNYLQMVYKNDLLEYS 399
Query: 75 ELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKI 134
L L L N+I V+ F L L ++ N + L F GL+ L+ L L YN I
Sbjct: 400 SLDLLHLGNNRIAVIQEGAFTNLTSLRRLYLNGNYLEVLFPAMFDGLQSLQYLYLEYNVI 459
Query: 135 SVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVP-NNVLSN 193
I F ++L+LL L+ N + D+ IF R L L NN +P VL
Sbjct: 460 KEIKPLTFDALINLQLLFLNNNLLRSLPDN-IFGGTALTR-LNLRNNHFSHLPVKGVLDQ 517
Query: 194 LP 195
LP
Sbjct: 518 LP 519
Score = 120 (47.3 bits), Expect = 8.8e-15, Sum P(2) = 8.8e-15
Identities = 40/127 (31%), Positives = 68/127 (53%)
Query: 332 SLTPLGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKI--NLIPNLDSIDQRAFVDNIQ 389
+ T L +L+ RL L+GN + F L SL+ + + N+I + + A + N+Q
Sbjct: 418 AFTNLTSLR--RLYLNGNYLEVLFPAMFDGLQSLQYLYLEYNVIKEIKPLTFDALI-NLQ 474
Query: 390 LETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFPLERI-SFL--DLSDN 446
L + +N N+ L+ LP +F G T L ++L+ N SHL L+++ +F+ DL +N
Sbjct: 475 L--LFLNNNL-LRSLPDNIF-GGTALTRLNLRNNHFSHLPVKGV-LDQLPAFIQIDLQEN 529
Query: 447 PLHCDCN 453
P C C+
Sbjct: 530 PWDCTCD 536
Score = 107 (42.7 bits), Expect = 7.5e-10, Sum P(2) = 7.5e-10
Identities = 38/129 (29%), Positives = 59/129 (45%)
Query: 97 QNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFN 156
Q ++ L ++ N ++ L + F TL L N + I AF L+ L L+ N
Sbjct: 61 QYRIYQLFLNGNLLTRLYPNEFVNYSNAVTLHLGNNGLQEIRTGAFSGLKTLKRLHLNNN 120
Query: 157 NITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNS 216
+ + + F L+SL L+ D N I + S L L L LN+NL+ ++ N
Sbjct: 121 KLEVLRE-DTFLGLESLEYLQADYNYISAIEAGAFSKL--NKLKVLILNDNLLLSLPSNV 177
Query: 217 FPFTL-TNL 224
F F L T+L
Sbjct: 178 FRFVLLTHL 186
Score = 72 (30.4 bits), Expect = 8.2e-10, Sum P(2) = 8.2e-10
Identities = 29/106 (27%), Positives = 50/106 (47%)
Query: 342 DRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFVDNIQ-LETVIINENMN 400
D L L N + I AF +L SL+ + +N N + A D +Q L+ + + N+
Sbjct: 402 DLLHLGNNRIAVIQEGAFTNLTSLRRLYLN--GNYLEVLFPAMFDGLQSLQYLYLEYNV- 458
Query: 401 LKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFPLERISFLDLSDN 446
+K++ F NL+ + L N L L + F ++ L+L +N
Sbjct: 459 IKEIKPLTFDALINLQLLFLNNNLLRSLPDNIFGGTALTRLNLRNN 504
Score = 71 (30.1 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 27/108 (25%), Positives = 41/108 (37%)
Query: 195 PHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXX 254
P ++ L+LN NL+ + N F +N TL L L+TL
Sbjct: 60 PQYRIYQLFLNGNLLTRLYPNEF-VNYSNAVTLHLGNNGLQEIRTGAFSGLKTLKRLHLN 118
Query: 255 XXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
+ L +L L N S I++ AF L LK++ +N
Sbjct: 119 NNKLEVLREDTFLGLESLEYLQADYNYISAIEAGAFSKLNKLKVLILN 166
Score = 50 (22.7 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 35/160 (21%), Positives = 66/160 (41%)
Query: 139 KTAFRDTLHLELLILSFNNITYFE-DSEIFSSLKSLRILKLDNNQILDVPNNVLSNL-PH 196
KTA +D + L N+ +++ F+++ L+ + Q+ + N+L+ L P+
Sbjct: 23 KTA-KDICKIRCLCEEKENVLNINCENKGFTTVSLLQPPQYRIYQLF-LNGNLLTRLYPN 80
Query: 197 QSLHY-----LYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXX 251
+ ++Y L+L N ++ + +F L L L L + L +L
Sbjct: 81 EFVNYSNAVTLHLGNNGLQEIRTGAFS-GLKTLKRLHLNNNKLEVLREDTFLGLESLEYL 139
Query: 252 XXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFK 291
AI SKL+ L L L+ N ++ S F+
Sbjct: 140 QADYNYISAIEAGAFSKLNKLKVLILNDNLLLSLPSNVFR 179
>UNIPROTKB|B3KTY4 [details] [associations]
symbol:SLITRK2 "cDNA FLJ38959 fis, clone NT2RI2000167,
highly similar to SLIT and NTRK-like protein 2" species:9606 "Homo
sapiens" [GO:0007409 "axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 HOGENOM:HOG000290667
HOVERGEN:HBG056407 EMBL:AL109653 IPI:IPI00410358
RefSeq:NP_001137478.1 RefSeq:NP_001137480.1 RefSeq:NP_001137481.1
RefSeq:NP_001137482.1 RefSeq:NP_115928.1 UniGene:Hs.320368
GeneID:84631 KEGG:hsa:84631 CTD:84631 HGNC:HGNC:13449
PharmGKB:PA134968225 ChiTaRS:SLITRK2 GenomeRNAi:84631 NextBio:74551
OrthoDB:EOG4GTKC9 EMBL:AK096278 EMBL:CH471175 SMR:B3KTY4
STRING:B3KTY4 Ensembl:ENST00000335565 Uniprot:B3KTY4
Length = 724
Score = 153 (58.9 bits), Expect = 9.5e-15, Sum P(2) = 9.5e-15
Identities = 56/199 (28%), Positives = 94/199 (47%)
Query: 16 KLNKAICPSRCQCFDQK--LEASCTDAGLEVVPIQLNPE--VQTIILRENRISNVHYTLS 71
K K IC RC C +++ L +C + G V + P+ + + L N ++ + Y
Sbjct: 23 KTAKDICKIRCLCEEKENVLNINCENKGFTTVSLLQPPQYRIYQLFLNGNLLTRL-YPNE 81
Query: 72 F--YIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDL 129
F Y +L L N + + + F L L+++ N++ L +DTF GL+ L+ L
Sbjct: 82 FVNYSNAVTLHLGNNGLQEIRTGAFSGLKTLKRLHLNNNKLEILREDTFLGLESLEYLQA 141
Query: 130 SYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVP-N 188
YN IS I AF L++LIL+ +N+ S +F + L L L N++ +P
Sbjct: 142 DYNYISAIEAGAFSKLNKLKVLILN-DNLLLSLPSNVFRFVL-LTHLDLRGNRLKVMPFA 199
Query: 189 NVLSNLPHQSLHYLYLNEN 207
VL ++ + + L EN
Sbjct: 200 GVLEHIG--GIMEIQLEEN 216
Score = 150 (57.9 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 55/182 (30%), Positives = 77/182 (42%)
Query: 22 CPSRCQCFDQK----LEASCTDAGL-EVVPIQLNP-EVQTIILRENRISNVHYT-LSFYI 74
CPS C C Q L +C + + +Q P + + L N + V+ L Y
Sbjct: 340 CPSSCVCTSQSSDNGLNVNCQERKFTNISDLQPKPTSPKKLYLTGNYLQTVYKNDLLEYS 399
Query: 75 ELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKI 134
L L L N+I V+ F L L ++ N + L F GL+ L+ L L YN I
Sbjct: 400 SLDLLHLGNNRIAVIQEGAFTNLTSLRRLYLNGNYLEVLYPSMFDGLQSLQYLYLEYNVI 459
Query: 135 SVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVP-NNVLSN 193
I F ++L+LL L+ N + D+ IF R L L NN +P VL
Sbjct: 460 KEIKPLTFDALINLQLLFLNNNLLRSLPDN-IFGGTALTR-LNLRNNHFSHLPVKGVLDQ 517
Query: 194 LP 195
LP
Sbjct: 518 LP 519
Score = 118 (46.6 bits), Expect = 9.5e-15, Sum P(2) = 9.5e-15
Identities = 40/127 (31%), Positives = 68/127 (53%)
Query: 332 SLTPLGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKI--NLIPNLDSIDQRAFVDNIQ 389
+ T L +L+ RL L+GN + F L SL+ + + N+I + + A + N+Q
Sbjct: 418 AFTNLTSLR--RLYLNGNYLEVLYPSMFDGLQSLQYLYLEYNVIKEIKPLTFDALI-NLQ 474
Query: 390 LETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFPLERI-SFL--DLSDN 446
L + +N N+ L+ LP +F G T L ++L+ N SHL L+++ +F+ DL +N
Sbjct: 475 L--LFLNNNL-LRSLPDNIF-GGTALTRLNLRNNHFSHLPVKGV-LDQLPAFIQIDLQEN 529
Query: 447 PLHCDCN 453
P C C+
Sbjct: 530 PWDCTCD 536
Score = 107 (42.7 bits), Expect = 8.5e-10, Sum P(2) = 8.5e-10
Identities = 38/129 (29%), Positives = 59/129 (45%)
Query: 97 QNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFN 156
Q ++ L ++ N ++ L + F TL L N + I AF L+ L L+ N
Sbjct: 61 QYRIYQLFLNGNLLTRLYPNEFVNYSNAVTLHLGNNGLQEIRTGAFSGLKTLKRLHLNNN 120
Query: 157 NITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNS 216
+ + + F L+SL L+ D N I + S L L L LN+NL+ ++ N
Sbjct: 121 KLEILRE-DTFLGLESLEYLQADYNYISAIEAGAFSKL--NKLKVLILNDNLLLSLPSNV 177
Query: 217 FPFTL-TNL 224
F F L T+L
Sbjct: 178 FRFVLLTHL 186
Score = 71 (30.1 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 35/160 (21%), Positives = 60/160 (37%)
Query: 150 LLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDV--PNNVLSNL-----PHQSLHYL 202
L +L+ I E + + +R L + +L++ N + + P ++ L
Sbjct: 8 LSVLTVAGILQTESRKTAKDICKIRCLCEEKENVLNINCENKGFTTVSLLQPPQYRIYQL 67
Query: 203 YLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIP 262
+LN NL+ + N F +N TL L L+TL +
Sbjct: 68 FLNGNLLTRLYPNEF-VNYSNAVTLHLGNNGLQEIRTGAFSGLKTLKRLHLNNNKLEILR 126
Query: 263 TKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
L +L L N S I++ AF L LK++ +N
Sbjct: 127 EDTFLGLESLEYLQADYNYISAIEAGAFSKLNKLKVLILN 166
Score = 51 (23.0 bits), Expect = 8.0e-08, Sum P(2) = 8.0e-08
Identities = 26/98 (26%), Positives = 45/98 (45%)
Query: 351 FSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNLKQLPSKLF 409
F+NI + K S K K+ L N L ++ + ++ L+ + + N + + F
Sbjct: 364 FTNISDLQPKPT-SPK--KLYLTGNYLQTVYKNDLLEYSSLDLLHLGNN-RIAVIQEGAF 419
Query: 410 QGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDN 446
T+L+ + L GN L L S F L+ + +L L N
Sbjct: 420 TNLTSLRRLYLNGNYLEVLYPSMFDGLQSLQYLYLEYN 457
Score = 50 (22.7 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 35/160 (21%), Positives = 66/160 (41%)
Query: 139 KTAFRDTLHLELLILSFNNITYFE-DSEIFSSLKSLRILKLDNNQILDVPNNVLSNL-PH 196
KTA +D + L N+ +++ F+++ L+ + Q+ + N+L+ L P+
Sbjct: 23 KTA-KDICKIRCLCEEKENVLNINCENKGFTTVSLLQPPQYRIYQLF-LNGNLLTRLYPN 80
Query: 197 QSLHY-----LYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXX 251
+ ++Y L+L N ++ + +F L L L L + L +L
Sbjct: 81 EFVNYSNAVTLHLGNNGLQEIRTGAFS-GLKTLKRLHLNNNKLEILREDTFLGLESLEYL 139
Query: 252 XXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFK 291
AI SKL+ L L L+ N ++ S F+
Sbjct: 140 QADYNYISAIEAGAFSKLNKLKVLILNDNLLLSLPSNVFR 179
>UNIPROTKB|A5H649 [details] [associations]
symbol:TLR3 "Toll-like receptor 3" species:9913 "Bos
taurus" [GO:0071260 "cellular response to mechanical stimulus"
evidence=IEA] [GO:0051092 "positive regulation of NF-kappaB
transcription factor activity" evidence=IEA] [GO:0046330 "positive
regulation of JNK cascade" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045359 "positive regulation of interferon-beta
biosynthetic process" evidence=IEA] [GO:0045356 "positive
regulation of interferon-alpha biosynthetic process" evidence=IEA]
[GO:0045080 "positive regulation of chemokine biosynthetic process"
evidence=IEA] [GO:0045078 "positive regulation of interferon-gamma
biosynthetic process" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0043123 "positive regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IEA] [GO:0042346
"positive regulation of NF-kappaB import into nucleus"
evidence=IEA] [GO:0034346 "positive regulation of type III
interferon production" evidence=IEA] [GO:0034123 "positive
regulation of toll-like receptor signaling pathway" evidence=IEA]
[GO:0032760 "positive regulation of tumor necrosis factor
production" evidence=IEA] [GO:0032757 "positive regulation of
interleukin-8 production" evidence=IEA] [GO:0032755 "positive
regulation of interleukin-6 production" evidence=IEA] [GO:0032735
"positive regulation of interleukin-12 production" evidence=IEA]
[GO:0032728 "positive regulation of interferon-beta production"
evidence=IEA] [GO:0032722 "positive regulation of chemokine
production" evidence=IEA] [GO:0007252 "I-kappaB phosphorylation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0051607 "defense response
to virus" evidence=IEA] [GO:0050729 "positive regulation of
inflammatory response" evidence=IEA] [GO:0045087 "innate immune
response" evidence=IEA] [GO:0034138 "toll-like receptor 3 signaling
pathway" evidence=IEA] [GO:0004888 "transmembrane signaling
receptor activity" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0002756 "MyD88-independent toll-like
receptor signaling pathway" evidence=IEA] InterPro:IPR000157
InterPro:IPR001611 InterPro:IPR027173 Pfam:PF01582 PROSITE:PS50104
PROSITE:PS51450 SMART:SM00255 GO:GO:0016021 GO:GO:0005737
GO:GO:0006952 GO:GO:0043123 GO:GO:0046330 GO:GO:0045944
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0032722 GO:GO:0032755 GO:GO:0009615 GO:GO:0051092
GO:GO:0032757 GO:GO:0071260 InterPro:IPR000372 SMART:SM00013
GO:GO:0032760 GO:GO:0043330 GO:GO:0032735 GO:GO:0042346
GO:GO:0045078 GO:GO:0032728 GO:GO:0007252 GO:GO:0045080
SUPFAM:SSF52200 GO:GO:0045359 GeneTree:ENSGT00680000099674
GO:GO:0034123 IPI:IPI00713414 UniGene:Bt.12298 HOVERGEN:HBG023181
PANTHER:PTHR24365:SF5 GO:GO:0045356 GO:GO:0034346 EMBL:DAAA02060200
EMBL:EF076741 EMBL:EF076742 EMBL:EF076745 EMBL:EF076746
EMBL:EF076749 STRING:A5H649 Ensembl:ENSBTAT00000011445
InParanoid:A5H649 OMA:WINKTHT Uniprot:A5H649
Length = 904
Score = 222 (83.2 bits), Expect = 9.6e-15, P = 9.6e-15
Identities = 112/440 (25%), Positives = 184/440 (41%)
Query: 32 KLEASCTDAGLEVVPIQL-NPEVQTIILRENRISNVHYTLSFYIE---LRSLDLSVNKIN 87
KL S T E + ++L N ++ + L N++ + +T ++ L +LDLS N +
Sbjct: 233 KLSPSLT----EKLCLELSNTSIENLSLSSNQLDTISHTTFDGLKQTNLTTLDLSRNSLR 288
Query: 88 VLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDL--SYNKISV-------IN 138
V+G+ +F + L L++ YN I LS +F GL L+ LDL S+ + S+ I+
Sbjct: 289 VMGNDSFAWLPHLEYLSLEYNNIEHLSSRSFYGLSNLRRLDLRRSFTRQSISLTSLPKID 348
Query: 139 KTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNN--QILDVPNNVLSNLPH 196
+F+ LE L + NN + + F+ L L+ L L N+ + + N +L
Sbjct: 349 DFSFQWLKCLEYLNMDDNNFPGIKRNT-FTGLVRLKFLSLSNSFSSLRTLTNETFLSLAG 407
Query: 197 QSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVT-LRTLHXXXXXX 255
L L L +N I + +F + L +L L L L +
Sbjct: 408 CPLLLLNLTKNKISKIQSGAFSW-LGHLEVLDLGLNEIGQELTGQEWRGLDNIVEIYLSY 466
Query: 256 XXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQXXX 315
+ T + + +L L L N+D S F +PNL +D
Sbjct: 467 NKYLELTTNSFTSVPSLQRLMLRRVALKNVD--CSPSPF-------RPLPNLVILDLSNN 517
Query: 316 XXXXXXXXXXXXXXAFSLTPLGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN 375
+ L RL N + + K LF L + +NL N
Sbjct: 518 NIANINDELLKGLEKLEILDLQHNNLARLWKHANPGGPVQFL--KGLFHLHI--LNLGSN 573
Query: 376 -LDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHF- 433
D I AF D +L+++ + N NL LP +F +LKS+SL+ N ++ ++ + F
Sbjct: 574 GFDEIPVEAFKDLRELKSIDLGMN-NLNILPQSVFDNQVSLKSLSLQKNLITSVQKTVFG 632
Query: 434 PLER-ISFLDLSDNPLHCDC 452
P R +S+LD+ NP C C
Sbjct: 633 PAFRNLSYLDMRFNPFDCTC 652
Score = 169 (64.5 bits), Expect = 5.8e-09, P = 5.8e-09
Identities = 83/358 (23%), Positives = 144/358 (40%)
Query: 76 LRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKIS 135
L L+L N+I+ L F + L L++ N I + D FK LK L LDLS+N +S
Sbjct: 102 LEILNLQHNEISQLSDKTFIFCMNLTELHLMSNSIQKIKNDPFKNLKNLIKLDLSHNGLS 161
Query: 136 VINKTAFRDTLHLELLILSFNNITYFEDSEI-FSSLKSLRILKLDNNQILDV-PN--NVL 191
+L+ L+LS N I+ E F SL+ L+L +NQI + P + L
Sbjct: 162 STKLGTQLQLENLQELLLSNNKISSLTPEEFDFLGNSSLKRLELSSNQIKEFSPGCFHTL 221
Query: 192 SNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXX 251
L SL+ L+ +L E + + T++ L+L L+ +
Sbjct: 222 GELSGLSLNNAKLSPSLTEKLC---LELSNTSIENLSLSSNQLDTISHTTFDGLKQTNLT 278
Query: 252 XXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSID 311
++ + L +L+ ++NI+ ++ +S + L NL +D
Sbjct: 279 TLDLSRN-SLRVMGNDSFAWLPHLEYLSLEYNNIEHLSSRSFYGLS--------NLRRLD 329
Query: 312 -QXXXXXXXXXXXXXXXXXAFSLTPLGTLKC-DRLDLSGNNFSNIDSVAFKSLFSLKLVK 369
+ FS LKC + L++ NNF I F L LK +
Sbjct: 330 LRRSFTRQSISLTSLPKIDDFSFQ---WLKCLEYLNMDDNNFPGIKRNTFTGLVRLKFLS 386
Query: 370 I-NLIPNLDSIDQRAFVDNIQLETVIINENMN-LKQLPSKLFQGNTNLKSVSLKGNSL 425
+ N +L ++ F+ +++N N + ++ S F +L+ + L N +
Sbjct: 387 LSNSFSSLRTLTNETFLSLAGCPLLLLNLTKNKISKIQSGAFSWLGHLEVLDLGLNEI 444
Score = 163 (62.4 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 96/401 (23%), Positives = 156/401 (38%)
Query: 21 ICPSRC-QCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVH-YTLSFYIELRS 78
+C S +C + A C+ L +P L + + L N++ + + Y +L
Sbjct: 21 LCTSSAHKCTVRHEVADCSHLKLTQIPDDLPTNITVLNLTHNQLRRLPPANFTRYSQLTI 80
Query: 79 LDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVIN 138
LD N I+ L + L LN+ +NEIS LS TF L L L N I I
Sbjct: 81 LDGGFNSISKLEPELCQSLPWLEILNLQHNEISQLSDKTFIFCMNLTELHLMSNSIQKIK 140
Query: 139 KTAFRDTLHLELLILSFNNITYFE-DSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQ 197
F++ +L L LS N ++ + +++ L++L+ L L NN+I + L +
Sbjct: 141 NDPFKNLKNLIKLDLSHNGLSSTKLGTQL--QLENLQELLLSNNKISSLTPEEFDFLGNS 198
Query: 198 SLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXX---VTLRTLHXXXXX 254
SL L L+ N I+ F TL L L+L ++ ++
Sbjct: 199 SLKRLELSSNQIKEFSPGCF-HTLGELSGLSLNNAKLSPSLTEKLCLELSNTSIENLSLS 257
Query: 255 XXXXXAIPTKQLS--KLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKI--NLIPNLDSI 310
I K + L LDLS N+ + + +F L L+ + + N I +L S
Sbjct: 258 SNQLDTISHTTFDGLKQTNLTTLDLSRNSLRVMGNDSFAWLPHLEYLSLEYNNIEHLSSR 317
Query: 311 D-QXXXXXXXXXXXXXXXXXAFSLTPLGT--------LKC-DRLDLSGNNFSNIDSVAFK 360
+ SLT L LKC + L++ NNF I F
Sbjct: 318 SFYGLSNLRRLDLRRSFTRQSISLTSLPKIDDFSFQWLKCLEYLNMDDNNFPGIKRNTFT 377
Query: 361 SLFSLKLVKI-NLIPNLDSIDQRAFVDNIQLETVIINENMN 400
L LK + + N +L ++ F+ +++N N
Sbjct: 378 GLVRLKFLSLSNSFSSLRTLTNETFLSLAGCPLLLLNLTKN 418
Score = 160 (61.4 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 116/487 (23%), Positives = 191/487 (39%)
Query: 75 ELRSLDLSVNKINVLGSHNF--EYQNKLL-NLNISYNEISALSKDTFKGLKE--LKTLDL 129
EL L L+ K++ + E N + NL++S N++ +S TF GLK+ L TLDL
Sbjct: 223 ELSGLSLNNAKLSPSLTEKLCLELSNTSIENLSLSSNQLDTISHTTFDGLKQTNLTTLDL 282
Query: 130 SYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNN 189
S N + V+ +F HLE L L +NNI + S F L +LR +LD + +
Sbjct: 283 SRNSLRVMGNDSFAWLPHLEYLSLEYNNIEHLS-SRSFYGLSNLR--RLDLRRSFTRQSI 339
Query: 190 VLSNLPH---------QSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXX 240
L++LP + L YL +++N + N+F L L L+L
Sbjct: 340 SLTSLPKIDDFSFQWLKCLEYLNMDDNNFPGIKRNTFT-GLVRLKFLSLSNSFSSLRTLT 398
Query: 241 XXVTLRT----LHXXXXXXXXXXAIPTKQLSKLSALVNLDL---------SGNNFSNIDS 287
L L I + S L L LDL +G + +D+
Sbjct: 399 NETFLSLAGCPLLLLNLTKNKISKIQSGAFSWLGHLEVLDLGLNEIGQELTGQEWRGLDN 458
Query: 288 VAFKSLFSLKLVKINLIPNLDSIDQXXXXXXXXXXXXXXXXXAFSLTPLGTLKCDRLDLS 347
+ L K +++ + S+ PL L LDLS
Sbjct: 459 IVEIYLSYNKYLELTT-NSFTSVPSLQRLMLRRVALKNVDCSPSPFRPLPNLVI--LDLS 515
Query: 348 GNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRA-------FVDNIQLETVIINENMN 400
NN +NI+ K L L+++ + NL + + A F+ + I+N N
Sbjct: 516 NNNIANINDELLKGLEKLEILDLQH-NNLARLWKHANPGGPVQFLKGL-FHLHILNLGSN 573
Query: 401 -LKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFPLE-RISFLDLSDNPLHCDCNXXXXX 458
++P + F+ LKS+ L N+L+ L S F + + L L N + +
Sbjct: 574 GFDEIPVEAFKDLRELKSIDLGMNNLNILPQSVFDNQVSLKSLSLQKNLI---TSVQKTV 630
Query: 459 XXXXXXXKSTMETTTVAYEMTSNTSISPGTTTEAQRVDRIIKNNHSLTIVLNNLKCSSPP 518
S ++ ++ T SI A V+ I + +++ + N+ C++PP
Sbjct: 631 FGPAFRNLSYLDMRFNPFDCTCE-SI-------AWFVNWINSTHTNISELSNHYLCNTPP 682
Query: 519 DIKGLEV 525
G V
Sbjct: 683 QYHGYPV 689
>MGI|MGI:2389180 [details] [associations]
symbol:Lrrtm4 "leucine rich repeat transmembrane neuronal 4"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=ISS] [GO:0030054 "cell junction" evidence=IEA]
[GO:0032281 "alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic
acid selective glutamate receptor complex" evidence=IDA]
[GO:0045202 "synapse" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0050808 "synapse organization"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
MGI:MGI:2389180 GO:GO:0030054 GO:GO:0045211 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 GO:GO:0032281 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00700000104056 HOGENOM:HOG000290681
HOVERGEN:HBG052362 CTD:80059 EMBL:AY182031 EMBL:BC037216
EMBL:AK032470 IPI:IPI00170371 IPI:IPI00269563 RefSeq:NP_848846.3
UniGene:Mm.473274 UniGene:Mm.483425 ProteinModelPortal:Q80XG9
SMR:Q80XG9 STRING:Q80XG9 PRIDE:Q80XG9 Ensembl:ENSMUST00000074662
Ensembl:ENSMUST00000126005 Ensembl:ENSMUST00000126399
Ensembl:ENSMUST00000133918 Ensembl:ENSMUST00000147663 GeneID:243499
KEGG:mmu:243499 UCSC:uc009ckf.2 UCSC:uc012enp.1 InParanoid:Q80XG9
NextBio:385801 Bgee:Q80XG9 CleanEx:MM_LRRTM4 Genevestigator:Q80XG9
GermOnline:ENSMUSG00000052581 Uniprot:Q80XG9
Length = 590
Score = 219 (82.2 bits), Expect = 9.9e-15, P = 9.9e-15
Identities = 73/237 (30%), Positives = 113/237 (47%)
Query: 77 RSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISV 136
+ L L N I L S+ F N+L+ L + +N IS++ +D F+G++ LK L LS NKI+
Sbjct: 64 QGLSLRFNSIQKLKSNQFAGLNQLIWLYLDHNYISSVDEDAFQGIRRLKELILSSNKITY 123
Query: 137 INKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPH 196
++ F +L L LS+N + + SE F L+ L IL L +N + VP V +
Sbjct: 124 LHNKTFHPVPNLRNLDLSYNKLQTLQ-SEQFKGLRKLIILHLRSNSLKTVPIRVFQDC-- 180
Query: 197 QSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXX 256
++L +L L N + ++ N+F L L L L L L
Sbjct: 181 RNLDFLDLGYNRLRSLSRNAFA-GLLKLKELHLEHNQFSKINFAHFPRLFNLRSIYLQWN 239
Query: 257 XXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQ 312
++ S+L LDLSGN+ I+ FK L +L+ K+NL N L ++ Q
Sbjct: 240 RIRSVSQGLTWTWSSLHTLDLSGNDIQAIEPGTFKCLPNLQ--KLNLDSNKLTNVSQ 294
Score = 206 (77.6 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 80/310 (25%), Positives = 126/310 (40%)
Query: 1 MNYFLTCI--FLILALTKLNKAICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIIL 58
M+ FL L++ LT +A CP C+C D K+ C +P ++ Q + L
Sbjct: 12 MSVFLVLFPTLLLVMLTGAQRA-CPKNCRC-DGKI-VYCESHAFADIPENISGGSQGLSL 68
Query: 59 RENRISNVHYT-LSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDT 117
R N I + + +L L L N I+ + F+ +L L +S N+I+ L T
Sbjct: 69 RFNSIQKLKSNQFAGLNQLIWLYLDHNYISSVDEDAFQGIRRLKELILSSNKITYLHNKT 128
Query: 118 FKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILK 177
F + L+ LDLSYNK+ + F+ L +L L N++ +F ++L L
Sbjct: 129 FHPVPNLRNLDLSYNKLQTLQSEQFKGLRKLIILHLRSNSLKTVP-IRVFQDCRNLDFLD 187
Query: 178 LDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXX 237
L N++ + N + L L L+L N + FP L NL ++ L
Sbjct: 188 LGYNRLRSLSRNAFAGL--LKLKELHLEHNQFSKINFAHFP-RLFNLRSIYLQWNRIRSV 244
Query: 238 XXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLK 297
T +LH AI L L L+L N +N+ + SL
Sbjct: 245 SQGLTWTWSSLHTLDLSGNDIQAIEPGTFKCLPNLQKLNLDSNKLTNVSQETVNAWISL- 303
Query: 298 LVKINLIPNL 307
+ I L N+
Sbjct: 304 -ISITLSGNM 312
>RGD|1560707 [details] [associations]
symbol:Lrrtm4 "leucine rich repeat transmembrane neuronal 4"
species:10116 "Rattus norvegicus" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISO] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0050808 "synapse organization"
evidence=IDA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
RGD:1560707 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0050808
InterPro:IPR000372 SMART:SM00013 HOGENOM:HOG000290681
HOVERGEN:HBG052362 CTD:80059 EMBL:BC168219 IPI:IPI00388758
RefSeq:NP_001128218.1 UniGene:Rn.140910 GeneID:500219
KEGG:rno:500219 OrthoDB:EOG4MW85Z NextBio:705440
Genevestigator:B4F7C5 Uniprot:B4F7C5
Length = 590
Score = 219 (82.2 bits), Expect = 9.9e-15, P = 9.9e-15
Identities = 73/237 (30%), Positives = 113/237 (47%)
Query: 77 RSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISV 136
+ L L N I L S+ F N+L+ L + +N IS++ +D F+G++ LK L LS NKI+
Sbjct: 64 QGLSLRFNSIQKLKSNQFAGLNQLIWLYLDHNYISSVDEDAFQGIRRLKELILSSNKITY 123
Query: 137 INKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPH 196
++ F +L L LS+N + + SE F L+ L IL L +N + VP V +
Sbjct: 124 LHNKTFHPVPNLRNLDLSYNKLQTLQ-SEQFKGLRKLIILHLRSNSLKTVPIRVFQDC-- 180
Query: 197 QSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXX 256
++L +L L N + ++ N+F L L L L L L
Sbjct: 181 RNLDFLDLGYNRLRSLSRNAFA-GLLKLKELHLEHNQFSKINFAHFPRLFNLRSIYLQWN 239
Query: 257 XXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQ 312
++ S+L LDLSGN+ I+ FK L +L+ K+NL N L ++ Q
Sbjct: 240 RIRSVSQGLTWTWSSLHTLDLSGNDIQAIEPGTFKCLPNLQ--KLNLDSNKLTNVSQ 294
Score = 203 (76.5 bits), Expect = 5.7e-13, P = 5.7e-13
Identities = 77/299 (25%), Positives = 122/299 (40%)
Query: 10 LILALTKLNKAICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYT 69
L++ LT +A CP C+C D K+ C +P ++ Q + LR N I +
Sbjct: 23 LLVMLTGAQRA-CPKNCRC-DGKI-VYCESHAFADIPENISGGSQGLSLRFNSIQKLKSN 79
Query: 70 -LSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLD 128
+ +L L L N I+ + F+ +L L +S N+I+ L TF + L+ LD
Sbjct: 80 QFAGLNQLIWLYLDHNYISSVDEDAFQGIRRLKELILSSNKITYLHNKTFHPVPNLRNLD 139
Query: 129 LSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPN 188
LSYNK+ + F+ L +L L N++ +F ++L L L N++ +
Sbjct: 140 LSYNKLQTLQSEQFKGLRKLIILHLRSNSLKTVP-IRVFQDCRNLDFLDLGYNRLRSLSR 198
Query: 189 NVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTL 248
N + L L L+L N + FP L NL ++ L T +L
Sbjct: 199 NAFAGL--LKLKELHLEHNQFSKINFAHFP-RLFNLRSIYLQWNRIRSVSQGLTWTWSSL 255
Query: 249 HXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNL 307
H AI L L L+L N +N+ + SL + I L N+
Sbjct: 256 HTLDLSGNDIQAIEPGTFKCLPNLQKLNLDSNKLTNVSQETVNAWISL--ISITLSGNM 312
>FB|FBgn0029114 [details] [associations]
symbol:Tollo "Tollo" species:7227 "Drosophila melanogaster"
[GO:0005886 "plasma membrane" evidence=ISS] [GO:0004888
"transmembrane signaling receptor activity" evidence=IEA;ISS]
[GO:0007165 "signal transduction" evidence=ISS] [GO:0006952
"defense response" evidence=NAS] [GO:0016021 "integral to membrane"
evidence=ISS] [GO:0007352 "zygotic specification of dorsal/ventral
axis" evidence=IEA] [GO:0006963 "positive regulation of
antibacterial peptide biosynthetic process" evidence=IEA]
[GO:0050830 "defense response to Gram-positive bacterium"
evidence=IEA] [GO:0008063 "Toll signaling pathway" evidence=IEA]
[GO:0009620 "response to fungus" evidence=IEA] [GO:0060049
"regulation of protein glycosylation" evidence=IMP] [GO:0048935
"peripheral nervous system neuron development" evidence=IMP]
[GO:0002227 "innate immune response in mucosa" evidence=IMP]
InterPro:IPR000157 InterPro:IPR001611 InterPro:IPR027202
Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450 SMART:SM00255
GO:GO:0016021 EMBL:AE014296 InterPro:IPR003591 SMART:SM00369
GO:GO:0005622 InterPro:IPR000372 SMART:SM00013 GO:GO:0004888
GO:GO:0002227 GO:GO:0048935 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00700000104286 GO:GO:0060049 SUPFAM:SSF52200
PANTHER:PTHR24371:SF0 HSSP:O60603 FlyBase:FBgn0029114 EMBL:AF204158
EMBL:AF247764 EMBL:AY118551 RefSeq:NP_524757.1 UniGene:Dm.3403
SMR:Q9V477 IntAct:Q9V477 MINT:MINT-316842 STRING:Q9V477
EnsemblMetazoa:FBtr0075607 GeneID:44497 KEGG:dme:Dmel_CG6890
UCSC:CG6890-RA CTD:44497 InParanoid:Q9V477 OMA:TIRTHNG
GenomeRNAi:44497 NextBio:837325 Uniprot:Q9V477
Length = 1346
Score = 235 (87.8 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 101/377 (26%), Positives = 164/377 (43%)
Query: 76 LRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKIS 135
L+SLDLS NK+ L + +L +LN++ N +S L+ F+GL L+ +DLS N+++
Sbjct: 212 LQSLDLSANKMVSLPTAMLSALGRLTHLNMAKNSMSFLADRAFEGLLSLRVVDLSANRLT 271
Query: 136 VINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLP 195
+ F +T L+ + L N+I IF L L +L L +N++ N + +
Sbjct: 272 SLPPELFAETKQLQEIYLRNNSINVLAPG-IFGELAELLVLDLASNELNSQWINAATFVG 330
Query: 196 HQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXX 255
+ L L L+ N I + + F L +L L L L LH
Sbjct: 331 LKRLMMLDLSANKISRLEAHIFR-PLASLQILKLEDNYIDQLPGGIFADLTNLHTLILSR 389
Query: 256 XXXXAIPTKQLSKLSALVNLDLSGNNFSNIDS---VAFKSLFSLKLV--KINLIPNLDSI 310
I + L L L+ L L N S +D V L L L K+ +P +
Sbjct: 390 NRISVIEQRTLQGLKNLLVLSLDFNRISRMDQRSLVNCSQLQDLHLNDNKLQAVPEALAH 449
Query: 311 DQXXXXXXXXXXXXXXXXXAFSLTPLGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKI 370
Q S+T L +L L ++ N+ ++I F + SL++ +
Sbjct: 450 VQLLKTLDVGENMISQIENT-SITQLESLY--GLRMTENSLTHIRRGVFDRMSSLQI--L 504
Query: 371 NLIPN-LDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLE 429
NL N L SI+ + N QL+ + ++ N LK + LF NL +++ GN L +
Sbjct: 505 NLSQNKLKSIEAGSLQRNSQLQAIRLDGNQ-LKSIAG-LFTELPNLVWLNISGNRLEKFD 562
Query: 430 ASHFPLERISFLDLSDN 446
SH P+ + +LD+ N
Sbjct: 563 YSHIPIG-LQWLDVRAN 578
Score = 229 (85.7 bits), Expect = 4.7e-14, Sum P(2) = 4.7e-14
Identities = 103/384 (26%), Positives = 167/384 (43%)
Query: 74 IELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNK 133
+ LR +DLS N++ L F +L + + N I+ L+ F L EL LDL+ N+
Sbjct: 258 LSLRVVDLSANRLTSLPPELFAETKQLQEIYLRNNSINVLAPGIFGELAELLVLDLASNE 317
Query: 134 ISV--INKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVL 191
++ IN F L +L LS N I+ E + IF L SL+ILKL++N I +P +
Sbjct: 318 LNSQWINAATFVGLKRLMMLDLSANKISRLE-AHIFRPLASLQILKLEDNYIDQLPGGIF 376
Query: 192 SNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXX 251
++L + LH L L+ N I + + L NL L+L V L
Sbjct: 377 ADLTN--LHTLILSRNRISVIEQRTLQ-GLKNLLVLSLDFNRISRMDQRSLVNCSQLQDL 433
Query: 252 XXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAF---KSLFSLKLVKINLIPNLD 308
A+P + L+ + L LD+ N S I++ + +SL+ L++ + +L
Sbjct: 434 HLNDNKLQAVP-EALAHVQLLKTLDVGENMISQIENTSITQLESLYGLRMTENSLTHIRR 492
Query: 309 SI-DQXXXXXXXXXXXXXXXXX-AFSLTPLGTLKCDRLDLSGNNFSNIDSVAFKSLFSLK 366
+ D+ A SL L+ RLD GN +I + F L +L
Sbjct: 493 GVFDRMSSLQILNLSQNKLKSIEAGSLQRNSQLQAIRLD--GNQLKSIAGL-FTELPNL- 548
Query: 367 LVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNLKQLPSKL-FQGNTNLKSVSLKGNS 424
V +N+ N L+ D I L+ + + N + QL + + +L + N
Sbjct: 549 -VWLNISGNRLEKFDYSHIP--IGLQWLDVRAN-RITQLGNYFEIESELSLSTFDASYNL 604
Query: 425 LSHLEASHFPLERISFLDLSDNPL 448
L+ + AS P + L L+DN +
Sbjct: 605 LTEITASSIP-NSVEVLYLNDNQI 627
Score = 224 (83.9 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 108/419 (25%), Positives = 177/419 (42%)
Query: 52 EVQTIILRENRISNVHYTLSF--YIELRSLDLSVNKINV--LGSHNFEYQNKLLNLNISY 107
++Q I LR N I NV F EL LDL+ N++N + + F +L+ L++S
Sbjct: 283 QLQEIYLRNNSI-NVLAPGIFGELAELLVLDLASNELNSQWINAATFVGLKRLMMLDLSA 341
Query: 108 NEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIF 167
N+IS L F+ L L+ L L N I + F D +L LILS N I+ E +
Sbjct: 342 NKISRLEAHIFRPLASLQILKLEDNYIDQLPGGIFADLTNLHTLILSRNRISVIEQRTL- 400
Query: 168 SSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTL 227
LK+L +L LD N+I + L N L L+LN+N ++ V + L L TL
Sbjct: 401 QGLKNLLVLSLDFNRISRMDQRSLVNC--SQLQDLHLNDNKLQAVPEALAHVQL--LKTL 456
Query: 228 ALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDS 287
+ L +L+ I ++S+L L+LS N +I++
Sbjct: 457 DVGENMISQIENTSITQLESLYGLRMTENSLTHIRRGVFDRMSSLQILNLSQNKLKSIEA 516
Query: 288 VAFKSLFSLKLVKI--NLIPNLDSI-DQXXXXXXXXXXXXXXXXXAFSLTPLGT----LK 340
+ + L+ +++ N + ++ + + +S P+G ++
Sbjct: 517 GSLQRNSQLQAIRLDGNQLKSIAGLFTELPNLVWLNISGNRLEKFDYSHIPIGLQWLDVR 576
Query: 341 CDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFVDNIQLETVIINENMN 400
+R+ GN F I+S S F NL+ + + + + N +E + +N+N
Sbjct: 577 ANRITQLGNYFE-IESELSLSTFD---ASYNLLTEITA----SSIPN-SVEVLYLNDNQI 627
Query: 401 LKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFPLERISF------LDLSDNPLHCDCN 453
K P F+ NL V L N L+ LE + L I+ + N CDCN
Sbjct: 628 SKIQPYTFFK-KPNLTRVDLVRNRLTTLEPNALRLSPIAEDREIPEFYIGHNAYECDCN 685
Score = 163 (62.4 bits), Expect = 6.8e-07, Sum P(2) = 6.8e-07
Identities = 94/377 (24%), Positives = 162/377 (42%)
Query: 89 LGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDL-----SYNKISV-INKTAF 142
L +F +L +L I Y ++ L+ +F+GL+EL+ L + ++ +S+ + +F
Sbjct: 89 LSPDSFRSLVELRDLTIEYCKLGNLTDGSFRGLQELRNLTIRTHNGDWSTMSLEMASNSF 148
Query: 143 RDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLS-NLPHQ---- 197
+ LE L LS NNI D + LKSL+ L N+I D+ N S +L +
Sbjct: 149 VEFRQLERLDLSLNNIWLIPDGMV-CPLKSLQHLNASYNKIQDISNFYFSASLSSRKARV 207
Query: 198 ---SLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXX 254
+L L L+ N + + L + L L L + L +L
Sbjct: 208 CGSTLQSLDLSANKMVS-LPTAMLSALGRLTHLNMAKNSMSFLADRAFEGLLSLRVVDLS 266
Query: 255 XXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQX 313
++P + ++ L + L N+ + + F L L LV ++L N L+S Q
Sbjct: 267 ANRLTSLPPELFAETKQLQEIYLRNNSINVLAPGIFGELAEL-LV-LDLASNELNS--QW 322
Query: 314 XXXXXXXXXXXXXXXXAFSLTPLGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLI 373
T +G + LDLS N S +++ F+ L SL+++K+
Sbjct: 323 INAA----------------TFVGLKRLMMLDLSANKISRLEAHIFRPLASLQILKLE-- 364
Query: 374 PN-LDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEA-S 431
N +D + F D L T+I++ N + + + QG NL +SL N +S ++ S
Sbjct: 365 DNYIDQLPGGIFADLTNLHTLILSRN-RISVIEQRTLQGLKNLLVLSLDFNRISRMDQRS 423
Query: 432 HFPLERISFLDLSDNPL 448
++ L L+DN L
Sbjct: 424 LVNCSQLQDLHLNDNKL 440
Score = 153 (58.9 bits), Expect = 7.9e-06, Sum P(2) = 7.9e-06
Identities = 98/391 (25%), Positives = 163/391 (41%)
Query: 75 ELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGL----------KEL 124
+L LDLS+N I ++ L +LN SYN+I +S F L
Sbjct: 153 QLERLDLSLNNIWLIPDGMVCPLKSLQHLNASYNKIQDISNFYFSASLSSRKARVCGSTL 212
Query: 125 KTLDLSYNKISVINKTAFRDTL-HLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQI 183
++LDLS NK+ V TA L L L ++ N++++ D F L SLR++ L N++
Sbjct: 213 QSLDLSANKM-VSLPTAMLSALGRLTHLNMAKNSMSFLAD-RAFEGLLSLRVVDLSANRL 270
Query: 184 LDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXV 243
+P + + + L +YL N I + F L L L L
Sbjct: 271 TSLPPELFAET--KQLQEIYLRNNSINVLAPGIFG-ELAELLVLDLAS------------ 315
Query: 244 TLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKI-- 301
L+ L L+ LDLS N S +++ F+ L SL+++K+
Sbjct: 316 --NELNSQWINAATFVG--------LKRLMMLDLSANKISRLEAHIFRPLASLQILKLED 365
Query: 302 NLIPNLDSIDQXXXXXXXXXXXXXXXXXAFSLTPLGTLKCDRLDLSGNNFSNIDSVAFKS 361
N I L L LK + L LS +F+ I + +S
Sbjct: 366 NYIDQLPGGIFADLTNLHTLILSRNRISVIEQRTLQGLK-NLLVLS-LDFNRISRMDQRS 423
Query: 362 LFSL-KLVKINLIPN-LDSIDQRAFVDNIQL-ETVIINENMNLKQLPSKLFQGNTNLKSV 418
L + +L ++L N L ++ + + ++QL +T+ + ENM + Q+ + +L +
Sbjct: 424 LVNCSQLQDLHLNDNKLQAVPEA--LAHVQLLKTLDVGENM-ISQIENTSITQLESLYGL 480
Query: 419 SLKGNSLSHLEASHFP-LERISFLDLSDNPL 448
+ NSL+H+ F + + L+LS N L
Sbjct: 481 RMTENSLTHIRRGVFDRMSSLQILNLSQNKL 511
Score = 153 (58.9 bits), Expect = 7.9e-06, Sum P(2) = 7.9e-06
Identities = 96/398 (24%), Positives = 174/398 (43%)
Query: 74 IELRSLDLSVNKINVLGSHNFEYQNKLLNLNI-SYN-EISALS----KDTFKGLKELKTL 127
+ELR L + K+ L +F +L NL I ++N + S +S ++F ++L+ L
Sbjct: 98 VELRDLTIEYCKLGNLTDGSFRGLQELRNLTIRTHNGDWSTMSLEMASNSFVEFRQLERL 157
Query: 128 DLSYNKISVINKTAFRDTLHLELLILSFN---NITYFEDSEIFSSLKS------LRILKL 178
DLS N I +I L+ L S+N +I+ F S SS K+ L+ L L
Sbjct: 158 DLSLNNIWLIPDGMVCPLKSLQHLNASYNKIQDISNFYFSASLSSRKARVCGSTLQSLDL 217
Query: 179 DNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXX 238
N+++ +P +LS L L +L + +N + + D +F L +L + L
Sbjct: 218 SANKMVSLPTAMLSALGR--LTHLNMAKNSMSFLADRAFE-GLLSLRVVDLSANRLTSLP 274
Query: 239 XXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSN--IDSVAFKSLFSL 296
+ L + +L+ L+ LDL+ N ++ I++ F L
Sbjct: 275 PELFAETKQLQEIYLRNNSINVLAPGIFGELAELLVLDLASNELNSQWINAATFVGL--K 332
Query: 297 KLVKINLIPN-LDSIDQXXXXXXXXXXXXXXXXXAFSLTPLGTLKCDRLDLSGNNFSN-- 353
+L+ ++L N + ++ P G + D +L S
Sbjct: 333 RLMMLDLSANKISRLEAHIFRPLASLQILKLEDNYIDQLP-GGIFADLTNLHTLILSRNR 391
Query: 354 IDSVAFKSLFSLK-LVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQG 411
I + ++L LK L+ ++L N + +DQR+ V+ QL+ + +N+N L+ +P L
Sbjct: 392 ISVIEQRTLQGLKNLLVLSLDFNRISRMDQRSLVNCSQLQDLHLNDN-KLQAVPEALAHV 450
Query: 412 NTNLKSVSLKGNSLSHLE-ASHFPLERISFLDLSDNPL 448
LK++ + N +S +E S LE + L +++N L
Sbjct: 451 QL-LKTLDVGENMISQIENTSITQLESLYGLRMTENSL 487
Score = 150 (57.9 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 50/170 (29%), Positives = 83/170 (48%)
Query: 19 KAICPSRCQCF-DQKLEAS---CTDAGLE-VVPIQLNPEVQTIILRENRISNVH-YTLSF 72
K CP RC C+ DQ ++ C+ A E +P + + + L N + +
Sbjct: 754 KMECPDRCSCYHDQSWTSNVVDCSRASYEQTLPSHIPMDSTQLYLDGNNFRELQSHAFIG 813
Query: 73 YIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYN 132
L+ L L+ ++I VL + F +L L + N++ AL+ + F+GL L+ L L +N
Sbjct: 814 RKRLKVLHLNHSRIEVLHNRTFYGLLELEVLQLQSNQLKALNGNEFQGLDNLQELYLQHN 873
Query: 133 KISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKS-LRILKLDNN 181
I+ I+ F HL++L L N IT F +++ L S L L+L +N
Sbjct: 874 AIATIDTLTFTHLYHLKILRLDHNAITSFA---VWNFLPSYLNELRLASN 920
Score = 147 (56.8 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 83/350 (23%), Positives = 152/350 (43%)
Query: 111 SALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSL 170
S+LS D+F+ L EL+ L + Y K+ + +FR L L + +N + S +S
Sbjct: 87 SSLSPDSFRSLVELRDLTIEYCKLGNLTDGSFRGLQELRNLTIRTHNGDWSTMSLEMASN 146
Query: 171 KSLRILKLDNNQILDVP-NNV--LSN---LPHQSLHYLYLNENLIETVLDNSFPFTLTNL 224
+ +L+ LD+ NN+ + + P +SL +L + N I+ + + F +L++
Sbjct: 147 SFVEFRQLER---LDLSLNNIWLIPDGMVCPLKSLQHLNASYNKIQDISNFYFSASLSS- 202
Query: 225 HTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSN 284
V TL ++PT LS L L +L+++ N+ S
Sbjct: 203 --------------RKARVCGSTLQSLDLSANKMVSLPTAMLSALGRLTHLNMAKNSMSF 248
Query: 285 IDSVAFKSLFSLKLVKINLIPNLDSIDQXXXXXXXXXXXXXXXXXAFS-LTP--LGTL-K 340
+ AF+ L SL++V ++ L S+ + + L P G L +
Sbjct: 249 LADRAFEGLLSLRVVDLSA-NRLTSLPPELFAETKQLQEIYLRNNSINVLAPGIFGELAE 307
Query: 341 CDRLDLSGNNFSN--IDSVAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINE 397
LDL+ N ++ I++ F L +L+ ++L N + ++ F L+ + + +
Sbjct: 308 LLVLDLASNELNSQWINAATFVGL--KRLMMLDLSANKISRLEAHIFRPLASLQILKLED 365
Query: 398 NMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDN 446
N + QLP +F TNL ++ L N +S +E L+ + L L N
Sbjct: 366 NY-IDQLPGGIFADLTNLHTLILSRNRISVIEQRTLQGLKNLLVLSLDFN 414
Score = 141 (54.7 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 40/117 (34%), Positives = 62/117 (52%)
Query: 69 TLSFYIELRSLDLSV--NKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKT 126
TL +I + S L + N L SH F + +L L+++++ I L TF GL EL+
Sbjct: 784 TLPSHIPMDSTQLYLDGNNFRELQSHAFIGRKRLKVLHLNHSRIEVLHNRTFYGLLELEV 843
Query: 127 LDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQI 183
L L N++ +N F+ +L+ L L N I D+ F+ L L+IL+LD+N I
Sbjct: 844 LQLQSNQLKALNGNEFQGLDNLQELYLQHNAIATI-DTLTFTHLYHLKILRLDHNAI 899
Score = 38 (18.4 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 7/17 (41%), Positives = 12/17 (70%)
Query: 555 VICILMYFIYRKRA-LW 570
+ICI + FI+R+ +W
Sbjct: 1034 MICISLVFIFRQEMRVW 1050
>UNIPROTKB|Q9H5Y7 [details] [associations]
symbol:SLITRK6 "SLIT and NTRK-like protein 6" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0016021 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007409 EMBL:CH471093
HOGENOM:HOG000290667 HOVERGEN:HBG056407 EMBL:AK021931 EMBL:AK026427
EMBL:AK292793 EMBL:AL137517 EMBL:BX648640 EMBL:AL162373
EMBL:BC101070 EMBL:BC101071 EMBL:BC101072 EMBL:BC101073
IPI:IPI00176398 PIR:T46279 RefSeq:NP_115605.2 UniGene:Hs.525105
ProteinModelPortal:Q9H5Y7 SMR:Q9H5Y7 STRING:Q9H5Y7
PhosphoSite:Q9H5Y7 DMDM:59803110 PaxDb:Q9H5Y7 PRIDE:Q9H5Y7
DNASU:84189 Ensembl:ENST00000400286 GeneID:84189 KEGG:hsa:84189
UCSC:uc001vll.1 CTD:84189 GeneCards:GC13M086366 HGNC:HGNC:23503
HPA:HPA014491 MIM:609681 neXtProt:NX_Q9H5Y7 PharmGKB:PA134928433
eggNOG:NOG113965 InParanoid:Q9H5Y7 OMA:YFELKAN OrthoDB:EOG4X0MRT
PhylomeDB:Q9H5Y7 GenomeRNAi:84189 NextBio:73578 Bgee:Q9H5Y7
CleanEx:HS_SLITRK6 Genevestigator:Q9H5Y7 GermOnline:ENSG00000184564
Uniprot:Q9H5Y7
Length = 841
Score = 158 (60.7 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 58/188 (30%), Positives = 85/188 (45%)
Query: 15 TKLNKAICPSRCQC---FDQKLEASCTDAGLEVVPIQLNPEVQT---IILRENRISNVHY 68
T+L CP C C L C + +E + L P Q +IL N I ++
Sbjct: 322 TQLPGPYCPIPCNCKVLSPSGLLIHCQERNIESLS-DLRPPPQNPRKLILAGNIIHSLMK 380
Query: 69 T-LSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTL 127
+ L Y L L L N+I VL +F +L L ++ N ++ LSK F GL L+ L
Sbjct: 381 SDLVEYFTLEMLHLGNNRIEVLEEGSFMNLTRLQKLYLNGNHLTKLSKGMFLGLHNLEYL 440
Query: 128 DLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVP 187
L YN I I F L++L L+ NN+ IFS + ++ L NQ +P
Sbjct: 441 YLEYNAIKEILPGTFNPMPKLKVLYLN-NNLLQVLPPHIFSGVPLTKV-NLKTNQFTHLP 498
Query: 188 -NNVLSNL 194
+N+L +L
Sbjct: 499 VSNILDDL 506
Score = 152 (58.6 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 39/134 (29%), Positives = 71/134 (52%)
Query: 79 LDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVIN 138
L L N + +L +++F +++++ +N I+ + F GL LK L +++N + ++
Sbjct: 69 LSLLNNGLTMLHTNDFSGLTNAISIHLGFNNIADIEIGAFNGLGLLKQLHINHNSLEILK 128
Query: 139 KTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQS 198
+ F +LE L N IT E S FS L L++L L++N I +P N+ +P
Sbjct: 129 EDTFHGLENLEFLQADNNFITVIEPSA-FSKLNRLKVLILNDNAIESLPPNIFRFVP--- 184
Query: 199 LHYLYLNENLIETV 212
L +L L N ++T+
Sbjct: 185 LTHLDLRGNQLQTL 198
Score = 141 (54.7 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 56/189 (29%), Positives = 86/189 (45%)
Query: 5 LTCIFLILALTKLN-KAICPSRCQCF--DQKLEASCTDAGLEVVP-IQLNPEVQ-TIILR 59
L CI L L+ + C S C C D + +C G+++V I + P + L
Sbjct: 13 LACISLHSQTPVLSSRGSCDSLCNCEEKDGTMLINCEAKGIKMVSEISVPPSRPFQLSLL 72
Query: 60 ENRISNVHYT-LSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTF 118
N ++ +H S S+ L N I + F L L+I++N + L +DTF
Sbjct: 73 NNGLTMLHTNDFSGLTNAISIHLGFNNIADIEIGAFNGLGLLKQLHINHNSLEILKEDTF 132
Query: 119 KGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKL 178
GL+ L+ L N I+VI +AF L++LIL+ N I + IF + L L L
Sbjct: 133 HGLENLEFLQADNNFITVIEPSAFSKLNRLKVLILNDNAIESLPPN-IFRFVP-LTHLDL 190
Query: 179 DNNQILDVP 187
NQ+ +P
Sbjct: 191 RGNQLQTLP 199
Score = 131 (51.2 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
Identities = 48/157 (30%), Positives = 79/157 (50%)
Query: 69 TLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLD 128
T+ E + + + V++I+V S F Q LLN N ++ L + F GL ++
Sbjct: 43 TMLINCEAKGIKM-VSEISVPPSRPF--QLSLLN-----NGLTMLHTNDFSGLTNAISIH 94
Query: 129 LSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPN 188
L +N I+ I AF L+ L ++ N++ ++ + F L++L L+ DNN I +
Sbjct: 95 LGFNNIADIEIGAFNGLGLLKQLHINHNSLEILKE-DTFHGLENLEFLQADNNFITVIEP 153
Query: 189 NVLSNLPHQSLHYLYLNENLIETVLDNSFPFT-LTNL 224
+ S L L L LN+N IE++ N F F LT+L
Sbjct: 154 SAFSKL--NRLKVLILNDNAIESLPPNIFRFVPLTHL 188
Score = 120 (47.3 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 33/116 (28%), Positives = 59/116 (50%)
Query: 340 KCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFVDNIQLETVIINENM 399
+ +L L+GN+ + + F L +L+ + + + I F +L+ + +N N+
Sbjct: 412 RLQKLYLNGNHLTKLSKGMFLGLHNLEYLYLEYNA-IKEILPGTFNPMPKLKVLYLNNNL 470
Query: 400 NLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHF--PLERISFLDLSDNPLHCDCN 453
L+ LP +F G L V+LK N +HL S+ L+ ++ +DL DNP C C+
Sbjct: 471 -LQVLPPHIFSG-VPLTKVNLKTNQFTHLPVSNILDDLDLLTQIDLEDNPWDCSCD 524
Score = 80 (33.2 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 34/157 (21%), Positives = 63/157 (40%)
Query: 134 ISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSN 193
I ++++ + + +L +L+ N +T ++ FS L + + L N I D+ +
Sbjct: 53 IKMVSEISVPPSRPFQLSLLN-NGLTMLHTND-FSGLTNAISIHLGFNNIADIEIGAFNG 110
Query: 194 LPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXX 253
L L L++N N +E + +++F L NL L L L
Sbjct: 111 LG--LLKQLHINHNSLEILKEDTF-HGLENLEFLQADNNFITVIEPSAFSKLNRLKVLIL 167
Query: 254 XXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAF 290
++P + + L +LDL GN + V F
Sbjct: 168 NDNAIESLPPN-IFRFVPLTHLDLRGNQLQTLPYVGF 203
Score = 72 (30.4 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 37/204 (18%), Positives = 94/204 (46%)
Query: 343 RLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFVDNIQLETVIINENMNLK 402
+L L+GN ++ F+L+++ + ++ +++ +F++ +L+ + +N N +L
Sbjct: 367 KLILAGNIIHSLMKSDLVEYFTLEMLHLGN-NRIEVLEEGSFMNLTRLQKLYLNGN-HLT 424
Query: 403 QLPSKLFQGNTNLKSVSLKGNSLSHLEASHF-PLERISFLDLSDN-----PLHCDCNXXX 456
+L +F G NL+ + L+ N++ + F P+ ++ L L++N P H
Sbjct: 425 KLSKGMFLGLHNLEYLYLEYNAIKEILPGTFNPMPKLKVLYLNNNLLQVLPPHIFSGVPL 484
Query: 457 XXXXXXXXXKSTMETTTVAYEMTSNTSI----SP-GTTTEAQRVDRIIKNNHSLTIVLNN 511
+ + + + ++ T I +P + + + + I+ T+ ++
Sbjct: 485 TKVNLKTNQFTHLPVSNILDDLDLLTQIDLEDNPWDCSCDLVGLQQWIQKLSKNTVT-DD 543
Query: 512 LKCSSPPDIKGLEVKAVPENSVHC 535
+ C+SP + E+KA+ + + C
Sbjct: 544 ILCTSPGHLDKKELKAL-NSEILC 566
Score = 56 (24.8 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 263 TKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
T S L+ +++ L NN ++I+ AF L LK + IN
Sbjct: 81 TNDFSGLTNAISIHLGFNNIADIEIGAFNGLGLLKQLHIN 120
Score = 44 (20.5 bits), Expect = 7.9e-07, Sum P(2) = 7.9e-07
Identities = 7/26 (26%), Positives = 16/26 (61%)
Query: 508 VLNNLKCSSPPDIKGLEVKAVPENSV 533
++ ++ C+SPP KG + + + S+
Sbjct: 241 IIGDVVCNSPPFFKGSILSRLKKESI 266
Score = 37 (18.1 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 269 LSALVNLDLSGNNFSNIDSVAFKSLFSLK 297
L+ L L L+GN+ + + F L +L+
Sbjct: 410 LTRLQKLYLNGNHLTKLSKGMFLGLHNLE 438
>UNIPROTKB|F1NZH1 [details] [associations]
symbol:SLITRK6 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007409 "axonogenesis" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00680000099859 OMA:YFELKAN
EMBL:AADN02029493 EMBL:AADN02029494 EMBL:AADN02029495
IPI:IPI00573056 Ensembl:ENSGALT00000027325 Uniprot:F1NZH1
Length = 826
Score = 161 (61.7 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 53/171 (30%), Positives = 84/171 (49%)
Query: 22 CPSRCQCFDQK--LEASCTDAGLEVVP-IQLNPEVQTII-LRENRISNVHYT-LSFYIEL 76
C S C C D+ + +C + G+++V I + P + L N ++ +H + +
Sbjct: 30 CQSLCSCEDKDDTVIINCEERGIKMVSEINVPPSRPFHLNLLNNGLTMLHVNDFAGLVNA 89
Query: 77 RSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISV 136
SL L N I + F N L L+I++N + L +DTF GL+ L+ L N I+V
Sbjct: 90 ISLHLGFNNIADIEPGAFNGLNLLKQLHINHNSLEILKEDTFDGLENLEFLQADNNFITV 149
Query: 137 INKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVP 187
I +AF L++LIL+ N I Y + IF + L L L NQ+ +P
Sbjct: 150 IEASAFSKLSRLKVLILNDNAIEYLPPN-IFRFVP-LTHLDLRGNQLQTLP 198
Score = 156 (60.0 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 56/182 (30%), Positives = 82/182 (45%)
Query: 22 CPSRCQCFDQKLEA---SCTDAGLEVV----PIQLNPEVQTIILRENRISNVHYT-LSFY 73
CP C C L C + +E + P NP+ +IL N I + + L Y
Sbjct: 327 CPIPCHCTSHMLSGVLMHCQERNIESLSDLGPPPTNPK--KLILAGNIIQTLLKSDLMDY 384
Query: 74 IELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNK 133
L L L N+I +L F +L L ++ N ++ LS++ F GL+ L+ L L YN
Sbjct: 385 ASLEMLHLGNNRIEILEEGAFMNLTRLQKLYLNGNHLTKLSQNLFLGLQHLEYLYLEYNA 444
Query: 134 ISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVP-NNVLS 192
I + F L++L L+ NN+ IFS + R L L NQ +P +NVL
Sbjct: 445 IKEVLPGTFNTMPKLKVLYLN-NNLLQTLPPHIFSGVPLAR-LNLKTNQFSHLPVSNVLD 502
Query: 193 NL 194
L
Sbjct: 503 EL 504
Score = 146 (56.5 bits), Expect = 5.3e-13, Sum P(2) = 5.3e-13
Identities = 40/134 (29%), Positives = 71/134 (52%)
Query: 79 LDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVIN 138
L+L N + +L ++F ++L++ +N I+ + F GL LK L +++N + ++
Sbjct: 68 LNLLNNGLTMLHVNDFAGLVNAISLHLGFNNIADIEPGAFNGLNLLKQLHINHNSLEILK 127
Query: 139 KTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQS 198
+ F +LE L N IT E S FS L L++L L++N I +P N+ +P
Sbjct: 128 EDTFDGLENLEFLQADNNFITVIEASA-FSKLSRLKVLILNDNAIEYLPPNIFRFVP--- 183
Query: 199 LHYLYLNENLIETV 212
L +L L N ++T+
Sbjct: 184 LTHLDLRGNQLQTL 197
Score = 136 (52.9 bits), Expect = 6.4e-12, Sum P(2) = 6.4e-12
Identities = 49/157 (31%), Positives = 78/157 (49%)
Query: 69 TLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLD 128
T+ E R + + V++INV S F +LN+ N ++ L + F GL +L
Sbjct: 42 TVIINCEERGIKM-VSEINVPPSRPF-------HLNLLNNGLTMLHVNDFAGLVNAISLH 93
Query: 129 LSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPN 188
L +N I+ I AF L+ L ++ N++ ++ + F L++L L+ DNN I +
Sbjct: 94 LGFNNIADIEPGAFNGLNLLKQLHINHNSLEILKE-DTFDGLENLEFLQADNNFITVIEA 152
Query: 189 NVLSNLPHQSLHYLYLNENLIETVLDNSFPFT-LTNL 224
+ S L L L LN+N IE + N F F LT+L
Sbjct: 153 SAFSKLSR--LKVLILNDNAIEYLPPNIFRFVPLTHL 187
Score = 121 (47.7 bits), Expect = 0.00083, P = 0.00083
Identities = 42/142 (29%), Positives = 73/142 (51%)
Query: 77 RSLDLSVNKIN-VLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKIS 135
+ L L+ N I +L S +Y + L L++ N I L + F L L+ L L+ N ++
Sbjct: 364 KKLILAGNIIQTLLKSDLMDYAS-LEMLHLGNNRIEILEEGAFMNLTRLQKLYLNGNHLT 422
Query: 136 VINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLP 195
+++ F HLE L L +N I F+++ L++L L+NN + +P ++ S +P
Sbjct: 423 KLSQNLFLGLQHLEYLYLEYNAIKEVLPGT-FNTMPKLKVLYLNNNLLQTLPPHIFSGVP 481
Query: 196 HQSLHYLYLNE--NL-IETVLD 214
L+ L N+ +L + VLD
Sbjct: 482 LARLN-LKTNQFSHLPVSNVLD 502
Score = 110 (43.8 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 34/132 (25%), Positives = 61/132 (46%)
Query: 340 KCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFVDNIQLETVIINENM 399
+ +L L+GN+ + + F L L+ + + + + F +L+ + +N N+
Sbjct: 410 RLQKLYLNGNHLTKLSQNLFLGLQHLEYLYLEYNA-IKEVLPGTFNTMPKLKVLYLNNNL 468
Query: 400 NLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHF--PLERISFLDLSDNPLHCDCNXXXX 457
L+ LP +F G L ++LK N SHL S+ L+ + ++L +NP C C+
Sbjct: 469 -LQTLPPHIFSG-VPLARLNLKTNQFSHLPVSNVLDELDMLVQIELENNPWDCTCDSVGL 526
Query: 458 XXXXXXXXKSTM 469
KSTM
Sbjct: 527 QKWIQKLSKSTM 538
Score = 80 (33.2 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 39/157 (24%), Positives = 59/157 (37%)
Query: 134 ISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSN 193
+S IN R HL LL N +T ++ F+ L + L L N I D+ +
Sbjct: 55 VSEINVPPSRP-FHLNLLN---NGLTMLHVND-FAGLVNAISLHLGFNNIADIEPGAFNG 109
Query: 194 LPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXX 253
L L L++N N +E + +++F L NL L L L
Sbjct: 110 L--NLLKQLHINHNSLEILKEDTFD-GLENLEFLQADNNFITVIEASAFSKLSRLKVLIL 166
Query: 254 XXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAF 290
+P + + L +LDL GN + V F
Sbjct: 167 NDNAIEYLPPN-IFRFVPLTHLDLRGNQLQTLPYVGF 202
Score = 58 (25.5 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 22/79 (27%), Positives = 36/79 (45%)
Query: 371 NLIPNLDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEA 430
N+I L D +D LE + + N ++ L F T L+ + L GN L+ L
Sbjct: 371 NIIQTLLKSD---LMDYASLEMLHLGNN-RIEILEEGAFMNLTRLQKLYLNGNHLTKLSQ 426
Query: 431 SHF-PLERISFLDLSDNPL 448
+ F L+ + +L L N +
Sbjct: 427 NLFLGLQHLEYLYLEYNAI 445
Score = 45 (20.9 bits), Expect = 6.4e-08, Sum P(2) = 6.4e-08
Identities = 7/15 (46%), Positives = 12/15 (80%)
Query: 508 VLNNLKCSSPPDIKG 522
++ ++ C+SPP IKG
Sbjct: 240 IIGDVVCNSPPVIKG 254
>RGD|1307733 [details] [associations]
symbol:Lgr5 "leucine rich repeat containing G protein coupled
receptor 5" species:10116 "Rattus norvegicus" [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016500 "protein-hormone receptor
activity" evidence=IEA] [GO:0048839 "inner ear development"
evidence=IEA;ISO] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000276 InterPro:IPR002131 InterPro:IPR017452
Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373 PROSITE:PS50262
PROSITE:PS51450 RGD:1307733 GO:GO:0016021 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0048839 GO:GO:0016500 EMBL:CH473960
GeneTree:ENSGT00650000092962 CTD:8549 KO:K04308 OMA:FNPHFKE
OrthoDB:EOG46143B IPI:IPI00360187 RefSeq:NP_001100254.1
UniGene:Rn.214063 Ensembl:ENSRNOT00000005814 GeneID:299802
KEGG:rno:299802 UCSC:RGD:1307733 NextBio:645794 Uniprot:D4AC13
Length = 907
Score = 221 (82.9 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 101/377 (26%), Positives = 157/377 (41%)
Query: 79 LDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVIN 138
LDLS+N I+ L + L L ++ N ++ + K F GL LK L L N++ +
Sbjct: 71 LDLSMNNISQLPASLLHRLRFLEELRLAGNALTHIPKGAFAGLHSLKVLMLQNNQLRQVP 130
Query: 139 KTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQS 198
+ A ++ L+ L L N+I+Y S FS L SLR L LD+N + DVP +L +
Sbjct: 131 EEALQNLRSLQSLRLDANHISYVPPS-CFSGLHSLRHLWLDDNALTDVPVQAFRSL--SA 187
Query: 199 LHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXX 258
L + L N I + D++F L++L L L L +L
Sbjct: 188 LQAMTLALNKIHHIADHAFG-NLSSLVVLHLHNNRIHSLGKKCFDGLHSLETLDLNYNNL 246
Query: 259 XAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQXXXXXX 318
PT + LS L L NN +I AF + L+ I+ N
Sbjct: 247 DEFPTA-IKTLSNLKELGFHSNNIRSIPERAFVG--NPSLITIHFYDNPIQFVGISAFQH 303
Query: 319 XXXXXXXXXXXAFSLTPL----GTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKI--NL 372
A +T GT + L L+G S++ L +L+++ + NL
Sbjct: 304 LPELRTLTLNGASQITEFPDLTGTATLESLTLTGAKISSLPQTVCDQLPNLQVLDLSYNL 363
Query: 373 IPNLDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASH 432
+ +L S+ + I L NE +K FQ NL+S++L N ++ + +
Sbjct: 364 LEDLPSLSGCQKLQKIDLRH---NEIYEIK---GGTFQQLFNLRSLNLARNKIAIIHPNA 417
Query: 433 FP-LERISFLDLSDNPL 448
F L + LDLS N L
Sbjct: 418 FSTLPSLIKLDLSSNLL 434
Score = 185 (70.2 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 103/436 (23%), Positives = 172/436 (39%)
Query: 22 CPSRCQC-FDQK--LEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSFYIE-LR 77
CPS C C D + L C+D GL +P L+ + L N IS + +L + L
Sbjct: 34 CPSYCHCELDGRMLLRVDCSDLGLSELPSNLSVFTSYLDLSMNNISQLPASLLHRLRFLE 93
Query: 78 SLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVI 137
L L+ N + + F + L L + N++ + ++ + L+ L++L L N IS +
Sbjct: 94 ELRLAGNALTHIPKGAFAGLHSLKVLMLQNNQLRQVPEEALQNLRSLQSLRLDANHISYV 153
Query: 138 NKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQ 197
+ F L L L N +T + F SL +L+ + L N+I + ++ NL
Sbjct: 154 PPSCFSGLHSLRHLWLDDNALTDVP-VQAFRSLSALQAMTLALNKIHHIADHAFGNL--S 210
Query: 198 SLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXX 257
SL L+L+ N I ++ F L +L TL L TL L
Sbjct: 211 SLVVLHLHNNRIHSLGKKCFD-GLHSLETLDLNYNNLDEFPTAIK-TLSNLKELGFHSNN 268
Query: 258 XXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQXXXXX 317
+IP + +L+ + N + AF+ L L+ + +N I +
Sbjct: 269 IRSIPERAFVGNPSLITIHFYDNPIQFVGISAFQHLPELRTLTLN---GASQITEFPDLT 325
Query: 318 XXXXXXXXXXXXAFSLTPLGTLKCDRL------DLSGNNFSNIDSVAFKSLFSLKLVKIN 371
A ++ L CD+L DLS N ++ S++ KL KI+
Sbjct: 326 GTATLESLTLTGA-KISSLPQTVCDQLPNLQVLDLSYNLLEDLPSLSGCQ----KLQKID 380
Query: 372 LIPN-LDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEA 430
L N + I F L ++ + N + + F +L + L N LS
Sbjct: 381 LRHNEIYEIKGGTFQQLFNLRSLNLARN-KIAIIHPNAFSTLPSLIKLDLSSNLLSSFPV 439
Query: 431 SHFPLERISFLDLSDN 446
+ L ++ L L+ N
Sbjct: 440 TG--LHGLTHLKLTGN 453
Score = 173 (66.0 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 108/428 (25%), Positives = 166/428 (38%)
Query: 23 PSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISN---VHYTLSFYIELRSL 79
PS F L+ S + + +P L ++ L E R++ H + L SL
Sbjct: 61 PSNLSVFTSYLDLSMNN--ISQLPASLLHRLR--FLEELRLAGNALTHIPKGAFAGLHSL 116
Query: 80 D---LSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISV 136
L N++ + + L +L + N IS + F GL L+ L L N ++
Sbjct: 117 KVLMLQNNQLRQVPEEALQNLRSLQSLRLDANHISYVPPSCFSGLHSLRHLWLDDNALTD 176
Query: 137 INKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPH 196
+ AFR L+ + L+ N I + D F +L SL +L L NN+I + L H
Sbjct: 177 VPVQAFRSLSALQAMTLALNKIHHIAD-HAFGNLSSLVVLHLHNNRIHSLGKKCFDGL-H 234
Query: 197 QSLHYLYLNENLIETVLDNSFPF---TLTNLHTLALXXXXXXXXXXXXXV---TLRTLHX 250
SL L LN N ++ FP TL+NL L V +L T+H
Sbjct: 235 -SLETLDLNYNNLD-----EFPTAIKTLSNLKELGFHSNNIRSIPERAFVGNPSLITIHF 288
Query: 251 XXXXXXXXXAIPTKQLSKLSAL-VNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDS 309
+ L +L L +N F ++ A +L KI+ +P
Sbjct: 289 YDNPIQFVGISAFQHLPELRTLTLNGASQITEFPDLTGTATLESLTLTGAKISSLPQT-V 347
Query: 310 IDQXXXXXXXXXXXXXXXXXAFSLTPLGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVK 369
DQ SL+ G K ++DL N I F+ LF+L+
Sbjct: 348 CDQLPNLQVLDLSYNLLEDLP-SLS--GCQKLQKIDLRHNEIYEIKGGTFQQLFNLR--S 402
Query: 370 INLIPN-LDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSL--S 426
+NL N + I AF L + ++ N+ L P G T+LK L GN S
Sbjct: 403 LNLARNKIAIIHPNAFSTLPSLIKLDLSSNL-LSSFPVTGLHGLTHLK---LTGNRALQS 458
Query: 427 HLEASHFP 434
+ +++FP
Sbjct: 459 LIPSANFP 466
Score = 124 (48.7 bits), Expect = 0.00044, P = 0.00044
Identities = 46/154 (29%), Positives = 77/154 (50%)
Query: 53 VQTIILRENRISNVHYTLSFYI-ELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEIS 111
++++ L +IS++ T+ + L+ LDLS N + L S KL +++ +NEI
Sbjct: 330 LESLTLTGAKISSLPQTVCDQLPNLQVLDLSYNLLEDLPS--LSGCQKLQKIDLRHNEIY 387
Query: 112 ALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLK 171
+ TF+ L L++L+L+ NKI++I+ AF L L LS N ++ F + L
Sbjct: 388 EIKGGTFQQLFNLRSLNLARNKIAIIHPNAFSTLPSLIKLDLSSNLLSSFP----VTGLH 443
Query: 172 SLRILKLDNNQILD--VPNNVLSNLPHQSLHYLY 203
L LKL N+ L +P+ L + Y Y
Sbjct: 444 GLTHLKLTGNRALQSLIPSANFPELKIIEMPYAY 477
>MGI|MGI:1891468 [details] [associations]
symbol:Lgr4 "leucine-rich repeat-containing G
protein-coupled receptor 4" species:10090 "Mus musculus"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0004930
"G-protein coupled receptor activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016500
"protein-hormone receptor activity" evidence=IEA] [GO:0030539 "male
genitalia development" evidence=IMP] [GO:0035239 "tube
morphogenesis" evidence=IMP] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0050673 "epithelial cell proliferation" evidence=IMP]
[GO:0061290 "canonical Wnt receptor signaling pathway involved in
metanephric kidney development" evidence=IMP] [GO:0072202 "cell
differentiation involved in metanephros development" evidence=IMP]
[GO:0072224 "metanephric glomerulus development" evidence=IMP]
[GO:0072282 "metanephric nephron tubule morphogenesis"
evidence=IMP] [GO:0090190 "positive regulation of branching
involved in ureteric bud morphogenesis" evidence=IMP] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS00237 PROSITE:PS50262 PROSITE:PS51450 MGI:MGI:1891468
GO:GO:0016021 GO:GO:0005886 GO:GO:0045892 GO:GO:0045893
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0030539
GO:GO:0090190 GO:GO:0050673 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0016500 EMBL:AL928922
GeneTree:ENSGT00650000092962 GO:GO:0061290 GO:GO:0072282 CTD:55366
HOVERGEN:HBG031675 KO:K04309 OMA:DGYWSDC OrthoDB:EOG476JZH
ChiTaRS:LGR4 GO:GO:0072202 GO:GO:0072224 EMBL:AL845423
EMBL:AY255619 EMBL:AK044357 EMBL:BC056637 IPI:IPI00753252
RefSeq:NP_766259.2 UniGene:Mm.277351 UniGene:Mm.485992
ProteinModelPortal:A2ARI4 SMR:A2ARI4 STRING:A2ARI4
PhosphoSite:A2ARI4 PRIDE:A2ARI4 DNASU:107515
Ensembl:ENSMUST00000046548 GeneID:107515 KEGG:mmu:107515
UCSC:uc008lmq.1 HOGENOM:HOG000231829 InParanoid:A2ARI4
NextBio:358950 Bgee:A2ARI4 Genevestigator:A2ARI4 Uniprot:A2ARI4
Length = 951
Score = 221 (82.9 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 104/378 (27%), Positives = 159/378 (42%)
Query: 77 RSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISV 136
++LD+S+N I L F+ L L ++ N++S + GLKELK L L N++
Sbjct: 60 QALDISMNNITQLPEDAFKNFPFLEELQLAGNDLSFIHPKALSGLKELKVLTLQNNQLKT 119
Query: 137 INKTAFRDTLHLELLILSFNNITYF-EDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLP 195
+ A R L+ L L N+IT EDS F L LR L LD+N + +VP LSNLP
Sbjct: 120 VPSEAIRGLSALQSLRLDANHITSVPEDS--FEGLVQLRHLWLDDNILTEVPVRPLSNLP 177
Query: 196 HQSLHYLYLNENLIETVLDNSFPFT-LTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXX 254
+L L L N I ++ D F FT L++L L L L L
Sbjct: 178 --TLQALTLALNNISSIPD--FAFTNLSSLVVLHLHNNKIKSLSQHCFDGLDNLETLDLN 233
Query: 255 XXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQXX 314
P + + L +L L N+ S I AF L+ + + P L +
Sbjct: 234 YNNLDEFP-QAIKALPSLKELGFHSNSISVIPDGAFAGNPLLRTIHLYDNP-LSFVGNSA 291
Query: 315 XXXXXXXXXXXXXXXAF-SLTP--LGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKIN 371
+ P GT+ + L L+G S+I ++ L+ + ++
Sbjct: 292 FHNLSDLHSLVIRGASLVQWFPNLAGTVHLESLTLTGTKISSIPDDLCQNQKMLRTLDLS 351
Query: 372 LIPNLDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEAS 431
N D D +F LE + + N + + FQG T+L+ + L N + + +
Sbjct: 352 Y--N-DIRDLPSFNGCRALEEISLQRNQ-ISLIKETTFQGLTSLRILDLSRNLIREIHSG 407
Query: 432 HFP-LERISFLDLSDNPL 448
F L I+ LD+S N L
Sbjct: 408 AFAKLGTITNLDVSFNEL 425
Score = 186 (70.5 bits), Expect = 8.7e-11, P = 8.7e-11
Identities = 101/408 (24%), Positives = 167/408 (40%)
Query: 23 PSRCQCFDQKLEASCTD-AGLEVVPIQLNPEVQTIILRENRISNVH-YTLSFYIELRSLD 80
P F Q L+ S + L + P ++ + L N +S +H LS EL+ L
Sbjct: 52 PEGLSAFTQALDISMNNITQLPEDAFKNFPFLEELQLAGNDLSFIHPKALSGLKELKVLT 111
Query: 81 LSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKT 140
L N++ + S + L +L + N I+++ +D+F+GL +L+ L L N ++ +
Sbjct: 112 LQNNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNILTEVPVR 171
Query: 141 AFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLH 200
+ L+ L L+ NNI+ D F++L SL +L L NN+I + + L +L
Sbjct: 172 PLSNLPTLQALTLALNNISSIPDFA-FTNLSSLVVLHLHNNKIKSLSQHCFDGL--DNLE 228
Query: 201 YLYLNENLIETVLD--NSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXX 258
L LN N ++ + P +L L + LRT+H
Sbjct: 229 TLDLNYNNLDEFPQAIKALP-SLKELGFHSNSISVIPDGAFAGNPLLRTIHLYDNPLSFV 287
Query: 259 XAIPTKQLSKLSALVNLDLSGNN-FSNIDSVAFKSLFSLKLVKINLIPNLDSIDQXXXXX 317
LS L +LV S F N+ +L KI+ IP+ +Q
Sbjct: 288 GNSAFHNLSDLHSLVIRGASLVQWFPNLAGTVHLESLTLTGTKISSIPDDLCQNQKMLRT 347
Query: 318 XXXXXXXXXXXXAFSLTPLGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKI--NLIPN 375
+F+ G + + L N S I F+ L SL+++ + NLI
Sbjct: 348 LDLSYNDIRDLPSFN----GCRALEEISLQRNQISLIKETTFQGLTSLRILDLSRNLIRE 403
Query: 376 LDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGN 423
+ S AF +L T I N +++ +L S +G L + L GN
Sbjct: 404 IHS---GAFA---KLGT-ITNLDVSFNELTSFPTEGLNGLNQLKLVGN 444
Score = 174 (66.3 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 98/431 (22%), Positives = 176/431 (40%)
Query: 21 ICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNV-HYTLSFYIELRSL 79
+C + C C D C+ GL VP L+ Q + + N I+ + + L L
Sbjct: 28 LCAAPCSC-DGDRRVDCSGKGLTAVPEGLSAFTQALDISMNNITQLPEDAFKNFPFLEEL 86
Query: 80 DLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINK 139
L+ N ++ + +L L + N++ + + +GL L++L L N I+ + +
Sbjct: 87 QLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHITSVPE 146
Query: 140 TAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSL 199
+F + L L L N +T + S+L +L+ L L N I +P+ +NL SL
Sbjct: 147 DSFEGLVQLRHLWLDDNILTEVPVRPL-SNLPTLQALTLALNNISSIPDFAFTNL--SSL 203
Query: 200 HYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXX 259
L+L+ N I+++ + F L NL TL L L +L
Sbjct: 204 VVLHLHNNKIKSLSQHCFD-GLDNLETLDLNYNNLDEFPQAIKA-LPSLKELGFHSNSIS 261
Query: 260 AIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKI---NLI---PNL-DSIDQ 312
IP + L + L N S + + AF +L L + I +L+ PNL ++
Sbjct: 262 VIPDGAFAGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHSLVIRGASLVQWFPNLAGTVHL 321
Query: 313 XXXXXXXXXXXXXXXXXAFSLTPLGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINL 372
+ L TL DLS N+ ++ S F +L+ +I+L
Sbjct: 322 ESLTLTGTKISSIPDDLCQNQKMLRTL-----DLSYNDIRDLPS--FNGCRALE--EISL 372
Query: 373 IPN-LDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEAS 431
N + I + F L + ++ N+ ++++ S F + ++ + N L+
Sbjct: 373 QRNQISLIKETTFQGLTSLRILDLSRNL-IREIHSGAFAKLGTITNLDVSFNELTS---- 427
Query: 432 HFPLERISFLD 442
FP E ++ L+
Sbjct: 428 -FPTEGLNGLN 437
Score = 156 (60.0 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 78/325 (24%), Positives = 138/325 (42%)
Query: 52 EVQTIILRENRISNVHYT-LSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEI 110
+++ + L +N ++ V LS L++L L++N I+ + F + L+ L++ N+I
Sbjct: 154 QLRHLWLDDNILTEVPVRPLSNLPTLQALTLALNNISSIPDFAFTNLSSLVVLHLHNNKI 213
Query: 111 SALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSL 170
+LS+ F GL L+TLDL+YN + + A + L+ L N+I+ D F+
Sbjct: 214 KSLSQHCFDGLDNLETLDLNYNNLDEFPQ-AIKALPSLKELGFHSNSISVIPDGA-FAGN 271
Query: 171 KSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLN-ENLIETVLDNSFPFTLTNLH--TL 227
LR + L +N + V N+ NL LH L + +L++ FP +H +L
Sbjct: 272 PLLRTIHLYDNPLSFVGNSAFHNL--SDLHSLVIRGASLVQW-----FPNLAGTVHLESL 324
Query: 228 ALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDS 287
L + L +P+ + AL + L N S I
Sbjct: 325 TLTGTKISSIPDDLCQNQKMLRTLDLSYNDIRDLPS--FNGCRALEEISLQRNQISLIKE 382
Query: 288 VAFKSLFSLKLVKI--NLIPNLDSIDQXXXXXXXXXXXXXXXXXAFSLTPLGTLKCDRLD 345
F+ L SL+++ + NLI + S +F L L ++L
Sbjct: 383 TTFQGLTSLRILDLSRNLIREIHSGAFAKLGTITNLDVSFNELTSFPTEGLNGL--NQLK 440
Query: 346 LSGNNFSNIDSVAFKSLFSLKLVKI 370
L GN F D++A + +L+ + +
Sbjct: 441 LVGN-FQLKDALAARDFANLRSLSV 464
>UNIPROTKB|Q9H156 [details] [associations]
symbol:SLITRK2 "SLIT and NTRK-like protein 2" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0016021 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 HOGENOM:HOG000290667
HOVERGEN:HBG056407 EMBL:Y19205 EMBL:AY358828 EMBL:AK091015
EMBL:AK289732 EMBL:AL109653 EMBL:BC113011 EMBL:BC113012
EMBL:AB058757 IPI:IPI00176104 IPI:IPI00410358 RefSeq:NP_001137475.1
RefSeq:NP_001137476.1 RefSeq:NP_001137477.1 RefSeq:NP_001137478.1
RefSeq:NP_001137480.1 RefSeq:NP_001137481.1 RefSeq:NP_001137482.1
RefSeq:NP_115928.1 UniGene:Hs.320368 ProteinModelPortal:Q9H156
SMR:Q9H156 STRING:Q9H156 PhosphoSite:Q9H156 DMDM:46397026
PaxDb:Q9H156 PRIDE:Q9H156 Ensembl:ENST00000370490
Ensembl:ENST00000413937 Ensembl:ENST00000428560
Ensembl:ENST00000434188 Ensembl:ENST00000447897 GeneID:84631
KEGG:hsa:84631 UCSC:uc004fcd.3 CTD:84631 GeneCards:GC0XP144900
H-InvDB:HIX0017096 H-InvDB:HIX0176721 HGNC:HGNC:13449 HPA:HPA051847
MIM:300561 neXtProt:NX_Q9H156 PharmGKB:PA134968225 eggNOG:NOG147171
InParanoid:Q9H156 OMA:LQADYNY PhylomeDB:Q9H156 ChiTaRS:SLITRK2
GenomeRNAi:84631 NextBio:74551 ArrayExpress:Q9H156 Bgee:Q9H156
CleanEx:HS_SLITRK2 Genevestigator:Q9H156 GermOnline:ENSG00000185985
Uniprot:Q9H156
Length = 845
Score = 153 (58.9 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 56/199 (28%), Positives = 94/199 (47%)
Query: 16 KLNKAICPSRCQCFDQK--LEASCTDAGLEVVPIQLNPE--VQTIILRENRISNVHYTLS 71
K K IC RC C +++ L +C + G V + P+ + + L N ++ + Y
Sbjct: 23 KTAKDICKIRCLCEEKENVLNINCENKGFTTVSLLQPPQYRIYQLFLNGNLLTRL-YPNE 81
Query: 72 F--YIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDL 129
F Y +L L N + + + F L L+++ N++ L +DTF GL+ L+ L
Sbjct: 82 FVNYSNAVTLHLGNNGLQEIRTGAFSGLKTLKRLHLNNNKLEILREDTFLGLESLEYLQA 141
Query: 130 SYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVP-N 188
YN IS I AF L++LIL+ +N+ S +F + L L L N++ +P
Sbjct: 142 DYNYISAIEAGAFSKLNKLKVLILN-DNLLLSLPSNVFRFVL-LTHLDLRGNRLKVMPFA 199
Query: 189 NVLSNLPHQSLHYLYLNEN 207
VL ++ + + L EN
Sbjct: 200 GVLEHIG--GIMEIQLEEN 216
Score = 150 (57.9 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 55/182 (30%), Positives = 77/182 (42%)
Query: 22 CPSRCQCFDQK----LEASCTDAGL-EVVPIQLNP-EVQTIILRENRISNVHYT-LSFYI 74
CPS C C Q L +C + + +Q P + + L N + V+ L Y
Sbjct: 340 CPSSCVCTSQSSDNGLNVNCQERKFTNISDLQPKPTSPKKLYLTGNYLQTVYKNDLLEYS 399
Query: 75 ELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKI 134
L L L N+I V+ F L L ++ N + L F GL+ L+ L L YN I
Sbjct: 400 SLDLLHLGNNRIAVIQEGAFTNLTSLRRLYLNGNYLEVLYPSMFDGLQSLQYLYLEYNVI 459
Query: 135 SVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVP-NNVLSN 193
I F ++L+LL L+ N + D+ IF R L L NN +P VL
Sbjct: 460 KEIKPLTFDALINLQLLFLNNNLLRSLPDN-IFGGTALTR-LNLRNNHFSHLPVKGVLDQ 517
Query: 194 LP 195
LP
Sbjct: 518 LP 519
Score = 118 (46.6 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 40/127 (31%), Positives = 68/127 (53%)
Query: 332 SLTPLGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKI--NLIPNLDSIDQRAFVDNIQ 389
+ T L +L+ RL L+GN + F L SL+ + + N+I + + A + N+Q
Sbjct: 418 AFTNLTSLR--RLYLNGNYLEVLYPSMFDGLQSLQYLYLEYNVIKEIKPLTFDALI-NLQ 474
Query: 390 LETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFPLERI-SFL--DLSDN 446
L + +N N+ L+ LP +F G T L ++L+ N SHL L+++ +F+ DL +N
Sbjct: 475 L--LFLNNNL-LRSLPDNIF-GGTALTRLNLRNNHFSHLPVKGV-LDQLPAFIQIDLQEN 529
Query: 447 PLHCDCN 453
P C C+
Sbjct: 530 PWDCTCD 536
Score = 107 (42.7 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 38/129 (29%), Positives = 59/129 (45%)
Query: 97 QNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFN 156
Q ++ L ++ N ++ L + F TL L N + I AF L+ L L+ N
Sbjct: 61 QYRIYQLFLNGNLLTRLYPNEFVNYSNAVTLHLGNNGLQEIRTGAFSGLKTLKRLHLNNN 120
Query: 157 NITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNS 216
+ + + F L+SL L+ D N I + S L L L LN+NL+ ++ N
Sbjct: 121 KLEILRE-DTFLGLESLEYLQADYNYISAIEAGAFSKL--NKLKVLILNDNLLLSLPSNV 177
Query: 217 FPFTL-TNL 224
F F L T+L
Sbjct: 178 FRFVLLTHL 186
Score = 71 (30.1 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 35/160 (21%), Positives = 60/160 (37%)
Query: 150 LLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDV--PNNVLSNL-----PHQSLHYL 202
L +L+ I E + + +R L + +L++ N + + P ++ L
Sbjct: 8 LSVLTVAGILQTESRKTAKDICKIRCLCEEKENVLNINCENKGFTTVSLLQPPQYRIYQL 67
Query: 203 YLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIP 262
+LN NL+ + N F +N TL L L+TL +
Sbjct: 68 FLNGNLLTRLYPNEF-VNYSNAVTLHLGNNGLQEIRTGAFSGLKTLKRLHLNNNKLEILR 126
Query: 263 TKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
L +L L N S I++ AF L LK++ +N
Sbjct: 127 EDTFLGLESLEYLQADYNYISAIEAGAFSKLNKLKVLILN 166
Score = 51 (23.0 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 26/98 (26%), Positives = 45/98 (45%)
Query: 351 FSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNLKQLPSKLF 409
F+NI + K S K K+ L N L ++ + ++ L+ + + N + + F
Sbjct: 364 FTNISDLQPKPT-SPK--KLYLTGNYLQTVYKNDLLEYSSLDLLHLGNN-RIAVIQEGAF 419
Query: 410 QGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDN 446
T+L+ + L GN L L S F L+ + +L L N
Sbjct: 420 TNLTSLRRLYLNGNYLEVLYPSMFDGLQSLQYLYLEYN 457
Score = 50 (22.7 bits), Expect = 0.00085, Sum P(2) = 0.00085
Identities = 35/160 (21%), Positives = 66/160 (41%)
Query: 139 KTAFRDTLHLELLILSFNNITYFE-DSEIFSSLKSLRILKLDNNQILDVPNNVLSNL-PH 196
KTA +D + L N+ +++ F+++ L+ + Q+ + N+L+ L P+
Sbjct: 23 KTA-KDICKIRCLCEEKENVLNINCENKGFTTVSLLQPPQYRIYQLF-LNGNLLTRLYPN 80
Query: 197 QSLHY-----LYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXX 251
+ ++Y L+L N ++ + +F L L L L + L +L
Sbjct: 81 EFVNYSNAVTLHLGNNGLQEIRTGAFS-GLKTLKRLHLNNNKLEILREDTFLGLESLEYL 139
Query: 252 XXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFK 291
AI SKL+ L L L+ N ++ S F+
Sbjct: 140 QADYNYISAIEAGAFSKLNKLKVLILNDNLLLSLPSNVFR 179
>UNIPROTKB|Q9BXB1 [details] [associations]
symbol:LGR4 "Leucine-rich repeat-containing G-protein
coupled receptor 4" species:9606 "Homo sapiens" [GO:0016500
"protein-hormone receptor activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030539 "male genitalia
development" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0050673 "epithelial cell proliferation" evidence=IEA]
[GO:0061290 "canonical Wnt receptor signaling pathway involved in
metanephric kidney development" evidence=IEA] [GO:0072202 "cell
differentiation involved in metanephros development" evidence=IEA]
[GO:0072224 "metanephric glomerulus development" evidence=IEA]
[GO:0072282 "metanephric nephron tubule morphogenesis"
evidence=IEA] [GO:0090190 "positive regulation of branching
involved in ureteric bud morphogenesis" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0004930 "G-protein coupled
receptor activity" evidence=TAS] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000276 InterPro:IPR002131 InterPro:IPR017452
Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373 PROSITE:PS00237
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886
GO:GO:0045892 GO:GO:0045893 EMBL:CH471064 GO:GO:0004930
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0030539
GO:GO:0090190 GO:GO:0050673 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0016500 GO:GO:0061290 GO:GO:0072282
EMBL:AF346711 EMBL:AF346709 EMBL:AF346710 EMBL:AF257182
EMBL:AC090597 IPI:IPI00217954 RefSeq:NP_060960.2 UniGene:Hs.502176
ProteinModelPortal:Q9BXB1 SMR:Q9BXB1 DIP:DIP-59894N STRING:Q9BXB1
PhosphoSite:Q9BXB1 DMDM:212286375 PaxDb:Q9BXB1 PRIDE:Q9BXB1
DNASU:55366 Ensembl:ENST00000379214 GeneID:55366 KEGG:hsa:55366
UCSC:uc001mrj.4 CTD:55366 GeneCards:GC11M027345 H-InvDB:HIX0009517
HGNC:HGNC:13299 HPA:HPA030267 MIM:606666 neXtProt:NX_Q9BXB1
PharmGKB:PA28893 HOVERGEN:HBG031675 InParanoid:Q9BXB1 KO:K04309
OMA:DGYWSDC OrthoDB:EOG476JZH ChiTaRS:LGR4 GenomeRNAi:55366
NextBio:59753 ArrayExpress:Q9BXB1 Bgee:Q9BXB1 CleanEx:HS_LGR4
Genevestigator:Q9BXB1 GermOnline:ENSG00000205213 GO:GO:0072202
GO:GO:0072224 Uniprot:Q9BXB1
Length = 951
Score = 220 (82.5 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 105/379 (27%), Positives = 164/379 (43%)
Query: 77 RSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISV 136
++LD+S+N I L F+ L L ++ N++S + GLKELK L L N++
Sbjct: 60 QALDISMNNITQLPEDAFKNFPFLEELQLAGNDLSFIHPKALSGLKELKVLTLQNNQLKT 119
Query: 137 INKTAFRDTLHLELLILSFNNITYF-EDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLP 195
+ A R L+ L L N+IT EDS F L LR L LD+N + +VP + LSNLP
Sbjct: 120 VPSEAIRGLSALQSLRLDANHITSVPEDS--FEGLVQLRHLWLDDNSLTEVPVHPLSNLP 177
Query: 196 HQSLHYLYLNENLIETVLDNSFPFT-LTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXX 254
+L L L N I ++ D F FT L++L L L L L
Sbjct: 178 --TLQALTLALNKISSIPD--FAFTNLSSLVVLHLHNNKIRSLSQHCFDGLDNLETLDLN 233
Query: 255 XXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKI--NLIPNL-DSID 311
P + + L +L L N+ S I AF L+ + + N + + +S
Sbjct: 234 YNNLGEFP-QAIKALPSLKELGFHSNSISVIPDGAFDGNPLLRTIHLYDNPLSFVGNSAF 292
Query: 312 QXXXXXXXXXXXXXXXXXAF-SLTPLGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKI 370
F +LT GT+ + L L+G S+I + + L+ + +
Sbjct: 293 HNLSDLHSLVIRGASMVQQFPNLT--GTVHLESLTLTGTKISSIPNNLCQEQKMLRTLDL 350
Query: 371 NLIPNLDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEA 430
+ N+ D +F LE + + N + Q+ FQG +L+ + L N + + +
Sbjct: 351 SY-NNIR--DLPSFNGCHALEEISLQRNQ-IYQIKEGTFQGLISLRILDLSRNLIHEIHS 406
Query: 431 SHFP-LERISFLDLSDNPL 448
F L I+ LD+S N L
Sbjct: 407 RAFATLGPITNLDVSFNEL 425
Score = 188 (71.2 bits), Expect = 5.3e-11, P = 5.3e-11
Identities = 95/427 (22%), Positives = 174/427 (40%)
Query: 21 ICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNV-HYTLSFYIELRSL 79
+C + C C D C+ GL VP L+ Q + + N I+ + + L L
Sbjct: 28 LCAAPCSC-DGDRRVDCSGKGLTAVPEGLSAFTQALDISMNNITQLPEDAFKNFPFLEEL 86
Query: 80 DLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINK 139
L+ N ++ + +L L + N++ + + +GL L++L L N I+ + +
Sbjct: 87 QLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHITSVPE 146
Query: 140 TAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSL 199
+F + L L L N++T + S+L +L+ L L N+I +P+ +NL SL
Sbjct: 147 DSFEGLVQLRHLWLDDNSLTEVPVHPL-SNLPTLQALTLALNKISSIPDFAFTNL--SSL 203
Query: 200 HYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXX 259
L+L+ N I ++ + F L NL TL L L +L
Sbjct: 204 VVLHLHNNKIRSLSQHCFD-GLDNLETLDLNYNNLGEFPQAIKA-LPSLKELGFHSNSIS 261
Query: 260 AIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKI---NLIPNLDSIDQXXXX 316
IP L + L N S + + AF +L L + I +++ ++
Sbjct: 262 VIPDGAFDGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHSLVIRGASMVQQFPNLTGTVHL 321
Query: 317 XXXXXXXXXXXXXAFSLTPLGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN- 375
+L + LDLS NN ++ S F +L+ +I+L N
Sbjct: 322 ESLTLTGTKISSIPNNLCQEQKM-LRTLDLSYNNIRDLPS--FNGCHALE--EISLQRNQ 376
Query: 376 LDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFPL 435
+ I + F I L + ++ N+ + ++ S+ F + ++ + N L+ FP
Sbjct: 377 IYQIKEGTFQGLISLRILDLSRNL-IHEIHSRAFATLGPITNLDVSFNELTS-----FPT 430
Query: 436 ERISFLD 442
E ++ L+
Sbjct: 431 EGLNGLN 437
Score = 185 (70.2 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 101/409 (24%), Positives = 165/409 (40%)
Query: 23 PSRCQCFDQKLEASCTD-AGLEVVPIQLNPEVQTIILRENRISNVH-YTLSFYIELRSLD 80
P F Q L+ S + L + P ++ + L N +S +H LS EL+ L
Sbjct: 52 PEGLSAFTQALDISMNNITQLPEDAFKNFPFLEELQLAGNDLSFIHPKALSGLKELKVLT 111
Query: 81 LSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKT 140
L N++ + S + L +L + N I+++ +D+F+GL +L+ L L N ++ +
Sbjct: 112 LQNNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSLTEVPVH 171
Query: 141 AFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNV---LSNLPHQ 197
+ L+ L L+ N I+ D F++L SL +L L NN+I + + L NL
Sbjct: 172 PLSNLPTLQALTLALNKISSIPDFA-FTNLSSLVVLHLHNNKIRSLSQHCFDGLDNLETL 230
Query: 198 SLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXX 257
L+Y L E + + + P +L L + LRT+H
Sbjct: 231 DLNYNNLGE-FPQAI--KALP-SLKELGFHSNSISVIPDGAFDGNPLLRTIHLYDNPLSF 286
Query: 258 XXAIPTKQLSKLSALVNLDLSG-NNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQXXXX 316
LS L +LV S F N+ +L KI+ IPN +Q
Sbjct: 287 VGNSAFHNLSDLHSLVIRGASMVQQFPNLTGTVHLESLTLTGTKISSIPNNLCQEQKMLR 346
Query: 317 XXXXXXXXXXXXXAFSLTPLGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKI--NLIP 374
+F+ G + + L N I F+ L SL+++ + NLI
Sbjct: 347 TLDLSYNNIRDLPSFN----GCHALEEISLQRNQIYQIKEGTFQGLISLRILDLSRNLIH 402
Query: 375 NLDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGN 423
+ S RAF L I N +++ +L S +G L + L GN
Sbjct: 403 EIHS---RAFAT---LGP-ITNLDVSFNELTSFPTEGLNGLNQLKLVGN 444
Score = 161 (61.7 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 79/325 (24%), Positives = 140/325 (43%)
Query: 52 EVQTIILRENRISNVH-YTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEI 110
+++ + L +N ++ V + LS L++L L++NKI+ + F + L+ L++ N+I
Sbjct: 154 QLRHLWLDDNSLTEVPVHPLSNLPTLQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKI 213
Query: 111 SALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSL 170
+LS+ F GL L+TLDL+YN + + A + L+ L N+I+ D F
Sbjct: 214 RSLSQHCFDGLDNLETLDLNYNNLGEFPQ-AIKALPSLKELGFHSNSISVIPDGA-FDGN 271
Query: 171 KSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLN-ENLIETVLDNSFP-FTLT-NLHTL 227
LR + L +N + V N+ NL LH L + ++++ FP T T +L +L
Sbjct: 272 PLLRTIHLYDNPLSFVGNSAFHNL--SDLHSLVIRGASMVQ-----QFPNLTGTVHLESL 324
Query: 228 ALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDS 287
L + L +P+ + AL + L N I
Sbjct: 325 TLTGTKISSIPNNLCQEQKMLRTLDLSYNNIRDLPS--FNGCHALEEISLQRNQIYQIKE 382
Query: 288 VAFKSLFSLKLVKI--NLIPNLDSIDQXXXXXXXXXXXXXXXXXAFSLTPLGTLKCDRLD 345
F+ L SL+++ + NLI + S +F L L ++L
Sbjct: 383 GTFQGLISLRILDLSRNLIHEIHSRAFATLGPITNLDVSFNELTSFPTEGLNGL--NQLK 440
Query: 346 LSGNNFSNIDSVAFKSLFSLKLVKI 370
L GN F +++A K +L+ + +
Sbjct: 441 LVGN-FKLKEALAAKDFVNLRSLSV 464
>UNIPROTKB|E2RFX7 [details] [associations]
symbol:SLITRK6 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0007409 "axonogenesis" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
GeneTree:ENSGT00680000099859 OMA:YFELKAN EMBL:AAEX03013284
RefSeq:XP_003639854.1 Ensembl:ENSCAFT00000008522 GeneID:100856466
KEGG:cfa:100856466 NextBio:20859498 Uniprot:E2RFX7
Length = 840
Score = 158 (60.7 bits), Expect = 7.4e-07, Sum P(2) = 7.4e-07
Identities = 57/194 (29%), Positives = 86/194 (44%)
Query: 9 FLILALTKLNKAICPSRCQC---FDQKLEASCTDAGLEVVPIQLNPEVQT---IILRENR 62
++ T+L CP C C L C + +E + L P Q ++L N
Sbjct: 316 YITKPFTQLPGPYCPIPCNCKVLSPSGLLVHCQERNIESLS-DLKPPPQNPRKLVLAGNI 374
Query: 63 ISNVHYT-LSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGL 121
I + + L Y L L L N+I VL +F +L L ++ N ++ LS+ F GL
Sbjct: 375 IHTLMKSDLVEYFTLEMLHLGNNRIEVLEEGSFINLTRLQKLYLNGNHLTKLSRGMFLGL 434
Query: 122 KELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNN 181
L+ L L YN + I F L++L L+ NN+ IFS + RI L N
Sbjct: 435 HNLEYLYLEYNAVKEILPGTFNPMPKLKVLYLN-NNLLQVLPPHIFSGVSLTRI-NLKTN 492
Query: 182 QILDVP-NNVLSNL 194
Q +P +N+L +L
Sbjct: 493 QFTHLPVSNILDDL 506
Score = 156 (60.0 bits), Expect = 1.8e-14, Sum P(3) = 1.8e-14
Identities = 40/134 (29%), Positives = 71/134 (52%)
Query: 79 LDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVIN 138
L L N + +L +++F ++L++ +N I+ + F GL LK L +++N + ++
Sbjct: 69 LSLLNNGLTMLHTNDFSGLTNAISLHLGFNNIADIETGAFNGLGLLKQLHINHNSLEILK 128
Query: 139 KTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQS 198
+ F +LE L N IT E S FS L L++L L++N I +P N+ +P
Sbjct: 129 EDTFHGLENLEFLQADNNFITVIEPSA-FSKLNRLKVLILNDNAIESLPPNIFRFVP--- 184
Query: 199 LHYLYLNENLIETV 212
L +L L N ++T+
Sbjct: 185 LTHLDLRGNQLQTL 198
Score = 138 (53.6 bits), Expect = 1.7e-12, Sum P(3) = 1.7e-12
Identities = 51/171 (29%), Positives = 80/171 (46%)
Query: 22 CPSRCQCF--DQKLEASCTDAGLEVVP-IQLNPEVQT-IILRENRISNVHYT-LSFYIEL 76
C S C C D + +C + G++ + I + P + L N ++ +H S
Sbjct: 31 CDSLCNCEEKDGTMLINCEEKGIKKLSQISVPPSRPFHLSLLNNGLTMLHTNDFSGLTNA 90
Query: 77 RSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISV 136
SL L N I + + F L L+I++N + L +DTF GL+ L+ L N I+V
Sbjct: 91 ISLHLGFNNIADIETGAFNGLGLLKQLHINHNSLEILKEDTFHGLENLEFLQADNNFITV 150
Query: 137 INKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVP 187
I +AF L++LIL+ N I + IF + L L L NQ+ +P
Sbjct: 151 IEPSAFSKLNRLKVLILNDNAIESLPPN-IFRFVP-LTHLDLRGNQLQTLP 199
Score = 131 (51.2 bits), Expect = 9.7e-12, Sum P(3) = 9.7e-12
Identities = 39/124 (31%), Positives = 65/124 (52%)
Query: 102 NLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYF 161
+L++ N ++ L + F GL +L L +N I+ I AF L+ L ++ N++
Sbjct: 68 HLSLLNNGLTMLHTNDFSGLTNAISLHLGFNNIADIETGAFNGLGLLKQLHINHNSLEIL 127
Query: 162 EDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFT- 220
++ + F L++L L+ DNN I + + S L L L LN+N IE++ N F F
Sbjct: 128 KE-DTFHGLENLEFLQADNNFITVIEPSAFSKL--NRLKVLILNDNAIESLPPNIFRFVP 184
Query: 221 LTNL 224
LT+L
Sbjct: 185 LTHL 188
Score = 119 (46.9 bits), Expect = 1.8e-14, Sum P(3) = 1.8e-14
Identities = 32/116 (27%), Positives = 60/116 (51%)
Query: 340 KCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFVDNIQLETVIINENM 399
+ +L L+GN+ + + F L +L+ + + + I F +L+ + +N N+
Sbjct: 412 RLQKLYLNGNHLTKLSRGMFLGLHNLEYLYLEYNA-VKEILPGTFNPMPKLKVLYLNNNL 470
Query: 400 NLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHF--PLERISFLDLSDNPLHCDCN 453
L+ LP +F G +L ++LK N +HL S+ L+ ++ +DL DNP C C+
Sbjct: 471 -LQVLPPHIFSG-VSLTRINLKTNQFTHLPVSNILDDLDLLTQIDLEDNPWDCSCD 524
Score = 87 (35.7 bits), Expect = 3.2e-07, Sum P(3) = 3.2e-07
Identities = 40/158 (25%), Positives = 61/158 (38%)
Query: 133 KISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLS 192
K+S I+ R HL LL N +T ++ FS L + L L N I D+ +
Sbjct: 55 KLSQISVPPSRP-FHLSLLN---NGLTMLHTND-FSGLTNAISLHLGFNNIADIETGAFN 109
Query: 193 NLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXX 252
L L L++N N +E + +++F L NL L L L
Sbjct: 110 GLG--LLKQLHINHNSLEILKEDTF-HGLENLEFLQADNNFITVIEPSAFSKLNRLKVLI 166
Query: 253 XXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAF 290
++P + + L +LDL GN + V F
Sbjct: 167 LNDNAIESLPPN-IFRFVPLTHLDLRGNQLQTLPYVGF 203
Score = 61 (26.5 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 15/40 (37%), Positives = 23/40 (57%)
Query: 263 TKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
T S L+ ++L L NN ++I++ AF L LK + IN
Sbjct: 81 TNDFSGLTNAISLHLGFNNIADIETGAFNGLGLLKQLHIN 120
Score = 52 (23.4 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 25/83 (30%), Positives = 36/83 (43%)
Query: 366 KLVKI-NLIPNLDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNS 424
KLV N+I L D V+ LE + + N ++ L F T L+ + L GN
Sbjct: 367 KLVLAGNIIHTLMKSD---LVEYFTLEMLHLGNN-RIEVLEEGSFINLTRLQKLYLNGNH 422
Query: 425 LSHLEASHF-PLERISFLDLSDN 446
L+ L F L + +L L N
Sbjct: 423 LTKLSRGMFLGLHNLEYLYLEYN 445
Score = 46 (21.3 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 8/26 (30%), Positives = 16/26 (61%)
Query: 508 VLNNLKCSSPPDIKGLEVKAVPENSV 533
V+ ++ C+SPP KG + + + S+
Sbjct: 241 VIGDIVCNSPPFFKGSILSRLKKESI 266
Score = 38 (18.4 bits), Expect = 1.8e-14, Sum P(3) = 1.8e-14
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 504 SLTIVLNNLKCSSPPDIKGLEVKAV 528
S V +++ C+SP + E+KA+
Sbjct: 536 SKNTVTDDILCTSPEHLDKKELKAL 560
>RGD|1562655 [details] [associations]
symbol:Tlr13 "toll-like receptor 13" species:10116 "Rattus
norvegicus" [GO:0002237 "response to molecule of bacterial origin"
evidence=IEA] [GO:0002755 "MyD88-dependent toll-like receptor
signaling pathway" evidence=IEA;ISO] [GO:0004888 "transmembrane
signaling receptor activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005768 "endosome" evidence=ISO] [GO:0009615
"response to virus" evidence=ISO] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IEA;ISO] [GO:0034178 "toll-like receptor 13 signaling
pathway" evidence=IEA;ISO] [GO:0042803 "protein homodimerization
activity" evidence=ISO] [GO:0043408 "regulation of MAPK cascade"
evidence=ISO] [GO:0045087 "innate immune response"
evidence=IEA;ISO] Pfam:PF00560 InterPro:IPR000157
InterPro:IPR001611 InterPro:IPR027196 Pfam:PF01582 PROSITE:PS50104
PROSITE:PS51450 SMART:SM00255 RGD:1562655 GO:GO:0007165
InterPro:IPR003591 SMART:SM00369 GO:GO:0005622 SUPFAM:SSF52200
PANTHER:PTHR24367:SF26 IPI:IPI00362009 Ensembl:ENSRNOT00000038868
Uniprot:F1LYZ1
Length = 987
Score = 190 (71.9 bits), Expect = 3.4e-11, P = 3.4e-11
Identities = 108/406 (26%), Positives = 172/406 (42%)
Query: 58 LRENRISNVHYTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSK-- 115
L EN+I +V+ + L +L LS N+I + F KL L++S N IS S
Sbjct: 154 LVENKIQSVNNSFEGLSNLETLLLSHNQITHIHKDAFTPLVKLKYLSLSRNRISNFSGIL 213
Query: 116 DTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRI 175
+ + L L+ LDL N I ++ + R + L L NN+T S + SL +L
Sbjct: 214 EAVQHLPCLEHLDLINNSIMYLDHSP-RSLVSLTHLSFEGNNLTELNFSTL--SLPNLTN 270
Query: 176 LKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXX 235
L N + + L LP L L L+ +++ L+ L N+ + L
Sbjct: 271 LSASQNGHGVIQDVYLKTLPQ--LQSLNLSGTVVK--LEMLSAKHLQNVRVMDLSNRELK 326
Query: 236 XXXXXXXVT---LRTL---HXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNN-FSNIDSV 288
+ LR L A KQL+K + L+ LDL N+ +++
Sbjct: 327 HGHLNMKIVCYLLRNLPMLEILFFHKNATNAEGIKQLAKCTRLLFLDLGQNSDLVHLNDS 386
Query: 289 AFKSLFSLKLVKINLIPNLDSIDQXXXXXXXXXXXXXXXXXAFSLTP---LGTLK-CDRL 344
F +L SL+ + +N L I F P LK + L
Sbjct: 387 EFNALPSLQRLNLNKC-QLSFISNKTWSSLQNLTILDLSHNKFKSFPDFAFSPLKRLEFL 445
Query: 345 DLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNLKQ 403
LS N + ++++AF LFSLK ++NL + +ID+ +F LE + + +N N++
Sbjct: 446 SLSRNPITELNNLAFSGLFSLK--ELNLAACWIVTIDRYSFTQFPNLEVLDLGDN-NIRT 502
Query: 404 LPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPL 448
L FQ L ++ L N L +E++ F L + +LDL N L
Sbjct: 503 LNHGTFQPLKKLHTLILSHNRLEIMESNAFSGLTGLRYLDLMYNSL 548
Score = 174 (66.3 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 66/253 (26%), Positives = 120/253 (47%)
Query: 52 EVQTIILRENRISNVHYTLSFYIELRS-LDLSVNKINVLGSHNFEYQNKLLNLNISYNEI 110
++ + +I+N+ +S + L+L+ N I VL +F + L++L + +N I
Sbjct: 76 DIHHVFCIRKKITNLTEAISDIPRYTTHLNLTNNYIQVLPPWSFTNLSALVDLRLEWNLI 135
Query: 111 SALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSL 170
+ + F+GL+ L L+L NKI +N + F +LE L+LS N IT+ + F+ L
Sbjct: 136 WKIDEGAFRGLENLTLLNLVENKIQSVNNS-FEGLSNLETLLLSHNQITHIH-KDAFTPL 193
Query: 171 KSLRILKLDNNQILDVPNNVLSNLPH-QSLHYLYLNENLIETVLDNSFPFTLTNLHTLAL 229
L+ L L N+I + + +L + H L +L L N I LD+S P +L +L L+
Sbjct: 194 VKLKYLSLSRNRISNF-SGILEAVQHLPCLEHLDLINNSI-MYLDHS-PRSLVSLTHLSF 250
Query: 230 XXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVA 289
++L L I L L L +L+LSG ++ ++
Sbjct: 251 EGNNLTELNFST-LSLPNLTNLSASQNGHGVIQDVYLKTLPQLQSLNLSGT-VVKLEMLS 308
Query: 290 FKSLFSLKLVKIN 302
K L +++++ ++
Sbjct: 309 AKHLQNVRVMDLS 321
Score = 174 (66.3 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 68/237 (28%), Positives = 98/237 (41%)
Query: 68 YTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTL 127
Y+ + + L LDL N I L F+ KL L +S+N + + + F GL L+ L
Sbjct: 482 YSFTQFPNLEVLDLGDNNIRTLNHGTFQPLKKLHTLILSHNRLEIMESNAFSGLTGLRYL 541
Query: 128 DLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEI----FSSLKSLRILKLDNNQ- 182
DL YN +S +K F L +L L FN ITY + F LKSL+ L L+ +
Sbjct: 542 DLMYNSLSYFHKHHFMGLEKLLVLKLGFNKITYETTRTLQYPPFMKLKSLKQLNLEGQKH 601
Query: 183 -ILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXX 241
I VP N L SL L L +N LD+ L NL L +
Sbjct: 602 GIQVVPRNFFQGL--SSLQELLLGKNP-SVFLDHHQFDPLINLTKLDISGTKDGDRSLYL 658
Query: 242 XVTL-RTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLK 297
+L + L + + S+L NL + F+N+ + L +LK
Sbjct: 659 NSSLFQNLKRLKVLRLENNNLESLVPGMFSSLQNLQVFSLRFNNLKVINQSHLENLK 715
Score = 156 (60.0 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 72/271 (26%), Positives = 115/271 (42%)
Query: 53 VQTIILRENRISNVHYTLSF--YIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEI 110
++ + L N I+ ++ L+F L+ L+L+ I + ++F L L++ N I
Sbjct: 442 LEFLSLSRNPITELN-NLAFSGLFSLKELNLAACWIVTIDRYSFTQFPNLEVLDLGDNNI 500
Query: 111 SALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSL 170
L+ TF+ LK+L TL LS+N++ ++ AF L L L +N+++YF F L
Sbjct: 501 RTLNHGTFQPLKKLHTLILSHNRLEIMESNAFSGLTGLRYLDLMYNSLSYFHKHH-FMGL 559
Query: 171 KSLRILKLDNNQILDVPNNVLSNLPHQSLHYL-YLN----ENLIETVLDNSFPFTLTNLH 225
+ L +LKL N+I L P L L LN ++ I+ V N F L++L
Sbjct: 560 EKLLVLKLGFNKITYETTRTLQYPPFMKLKSLKQLNLEGQKHGIQVVPRNFFQ-GLSSLQ 618
Query: 226 TLALXXXXXXXXXXXXX---VTLRTLHXXXXXXXXXXAIPTKQL-SKLSALVNLDLSGNN 281
L L + L L L L L L L NN
Sbjct: 619 ELLLGKNPSVFLDHHQFDPLINLTKLDISGTKDGDRSLYLNSSLFQNLKRLKVLRLENNN 678
Query: 282 FSNIDSVAFKSLFSLKLVKINLIPNLDSIDQ 312
++ F SL +L++ + NL I+Q
Sbjct: 679 LESLVPGMFSSLQNLQVFSLRF-NNLKVINQ 708
Score = 144 (55.7 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
Identities = 52/158 (32%), Positives = 76/158 (48%)
Query: 51 PEVQTIILRENRISNV-HYTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNE 109
P +Q + L + ++S + + T S L LDLS NK F +L L++S N
Sbjct: 392 PSLQRLNLNKCQLSFISNKTWSSLQNLTILDLSHNKFKSFPDFAFSPLKRLEFLSLSRNP 451
Query: 110 ISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSS 169
I+ L+ F GL LK L+L+ I I++ +F +LE+L L NNI F
Sbjct: 452 ITELNNLAFSGLFSLKELNLAACWIVTIDRYSFTQFPNLEVLDLGDNNIRTLNHGT-FQP 510
Query: 170 LKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNEN 207
LK L L L +N++ + +N S L L YL L N
Sbjct: 511 LKKLHTLILSHNRLEIMESNAFSGLT--GLRYLDLMYN 546
Score = 96 (38.9 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 34/115 (29%), Positives = 56/115 (48%)
Query: 346 LSGNNFSN-IDSVAFKSLFSLKLVKINLIPNLDSIDQRAFVD-----NIQLETVIINENM 399
L G N S +D F L + L K+++ D D+ +++ N++ V+ EN
Sbjct: 621 LLGKNPSVFLDHHQFDPL--INLTKLDISGTKDG-DRSLYLNSSLFQNLKRLKVLRLENN 677
Query: 400 NLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPLHCDCN 453
NL+ L +F NL+ SL+ N+L + SH L+ + F D+ N L C C+
Sbjct: 678 NLESLVPGMFSSLQNLQVFSLRFNNLKVINQSHLENLKSLMFFDVYGNKLQCTCD 732
>RGD|1306550 [details] [associations]
symbol:Slitrk6 "SLIT and NTRK-like family, member 6"
species:10116 "Rattus norvegicus" [GO:0007409 "axonogenesis"
evidence=IEA;ISO] InterPro:IPR001611 PROSITE:PS51450 RGD:1306550
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0007409 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00680000099859 EMBL:CH473951 CTD:84189 OMA:YFELKAN
OrthoDB:EOG4X0MRT IPI:IPI00205859 RefSeq:NP_001099527.1
UniGene:Rn.99063 Ensembl:ENSRNOT00000038433 GeneID:290467
KEGG:rno:290467 UCSC:RGD:1306550 NextBio:631101 Uniprot:D3ZP44
Length = 840
Score = 156 (60.0 bits), Expect = 2.3e-14, Sum P(3) = 2.3e-14
Identities = 40/134 (29%), Positives = 70/134 (52%)
Query: 79 LDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVIN 138
L L N + L +++F L++++ +N I+ + F GL LK L +++N + ++
Sbjct: 69 LSLLNNGLTTLHTNDFSGLTNALSIHLGFNNIADIETGAFNGLGLLKQLHINHNSLEILK 128
Query: 139 KTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQS 198
+ F +LE L N IT E S FS L L++L L++N I +P N+ +P
Sbjct: 129 EDTFHGLENLEFLQADNNFITVIEQSA-FSKLNRLKVLILNDNAIESLPPNIFRFVP--- 184
Query: 199 LHYLYLNENLIETV 212
L +L L N ++T+
Sbjct: 185 LTHLDLRGNQLQTL 198
Score = 156 (60.0 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 57/193 (29%), Positives = 86/193 (44%)
Query: 9 FLILALTKLNKAICPSRCQC---FDQKLEASCTDAGLEVVP-IQLNPE-VQTIILRENRI 63
+L T+L CP C C L C + +E V +Q P + +IL N I
Sbjct: 315 YLTKPSTQLPVPYCPVPCNCKVLSPSGLLIHCQERNIESVSDLQPPPHNPRKLILAGNII 374
Query: 64 SNVHYT-LSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLK 122
+ L Y L L L N+I VL +F +L L ++ N ++ L K F GL
Sbjct: 375 HTLMKADLMDYFTLEMLHLGNNRIEVLEEGSFMNLTRLQKLYLNGNHLTKLYKGMFLGLS 434
Query: 123 ELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQ 182
L+ L L YN + I F L++L L+ NN+ + + IF + R+ L NQ
Sbjct: 435 SLEYLYLEYNAVKEILPGTFNPMPKLKVLYLN-NNLLHVLPAHIFLGIPLTRV-NLKTNQ 492
Query: 183 ILDVP-NNVLSNL 194
+P +N+L +L
Sbjct: 493 FTHLPVSNILDDL 505
Score = 137 (53.3 bits), Expect = 2.7e-12, Sum P(3) = 2.7e-12
Identities = 48/171 (28%), Positives = 81/171 (47%)
Query: 22 CPSRCQCFDQK--LEASCTDAGLEVVP-IQLNPEVQT-IILRENRISNVHYT-LSFYIEL 76
C + C C ++ + +C + G+ + I + P + L N ++ +H S
Sbjct: 31 CDTLCTCEEKDGIMIINCEEKGINTLSQISVPPSRPFHLSLLNNGLTTLHTNDFSGLTNA 90
Query: 77 RSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISV 136
S+ L N I + + F L L+I++N + L +DTF GL+ L+ L N I+V
Sbjct: 91 LSIHLGFNNIADIETGAFNGLGLLKQLHINHNSLEILKEDTFHGLENLEFLQADNNFITV 150
Query: 137 INKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVP 187
I ++AF L++LIL+ N I + IF + L L L NQ+ +P
Sbjct: 151 IEQSAFSKLNRLKVLILNDNAIESLPPN-IFRFVP-LTHLDLRGNQLQTLP 199
Score = 133 (51.9 bits), Expect = 7.4e-12, Sum P(3) = 7.4e-12
Identities = 38/124 (30%), Positives = 65/124 (52%)
Query: 102 NLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYF 161
+L++ N ++ L + F GL ++ L +N I+ I AF L+ L ++ N++
Sbjct: 68 HLSLLNNGLTTLHTNDFSGLTNALSIHLGFNNIADIETGAFNGLGLLKQLHINHNSLEIL 127
Query: 162 EDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFT- 220
++ + F L++L L+ DNN I + + S L L L LN+N IE++ N F F
Sbjct: 128 KE-DTFHGLENLEFLQADNNFITVIEQSAFSKL--NRLKVLILNDNAIESLPPNIFRFVP 184
Query: 221 LTNL 224
LT+L
Sbjct: 185 LTHL 188
Score = 111 (44.1 bits), Expect = 2.3e-14, Sum P(3) = 2.3e-14
Identities = 34/116 (29%), Positives = 58/116 (50%)
Query: 340 KCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFVDNIQLETVIINENM 399
+ +L L+GN+ + + F L SL+ + + + I F +L+ + +N N+
Sbjct: 411 RLQKLYLNGNHLTKLYKGMFLGLSSLEYLYLEYNA-VKEILPGTFNPMPKLKVLYLNNNL 469
Query: 400 NLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHF--PLERISFLDLSDNPLHCDCN 453
L LP+ +F G L V+LK N +HL S+ L+ + +DL DNP C C+
Sbjct: 470 -LHVLPAHIFLG-IPLTRVNLKTNQFTHLPVSNILDDLDLLIQIDLEDNPWDCSCD 523
Score = 87 (35.7 bits), Expect = 4.5e-07, Sum P(3) = 4.5e-07
Identities = 40/171 (23%), Positives = 65/171 (38%)
Query: 120 GLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLD 179
G+ + + N +S I+ R HL LL N +T ++ FS L + + L
Sbjct: 42 GIMIINCEEKGINTLSQISVPPSRP-FHLSLLN---NGLTTLHTND-FSGLTNALSIHLG 96
Query: 180 NNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXX 239
N I D+ + L L L++N N +E + +++F L NL L
Sbjct: 97 FNNIADIETGAFNGLG--LLKQLHINHNSLEILKEDTF-HGLENLEFLQADNNFITVIEQ 153
Query: 240 XXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAF 290
L L ++P + + L +LDL GN + V F
Sbjct: 154 SAFSKLNRLKVLILNDNAIESLPPN-IFRFVPLTHLDLRGNQLQTLPYVGF 203
Score = 57 (25.1 bits), Expect = 0.00042, Sum P(3) = 0.00042
Identities = 14/40 (35%), Positives = 23/40 (57%)
Query: 263 TKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
T S L+ +++ L NN ++I++ AF L LK + IN
Sbjct: 81 TNDFSGLTNALSIHLGFNNIADIETGAFNGLGLLKQLHIN 120
Score = 53 (23.7 bits), Expect = 1.7e-08, Sum P(3) = 1.7e-08
Identities = 22/77 (28%), Positives = 33/77 (42%)
Query: 371 NLIPNLDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEA 430
N+I L D +D LE + + N ++ L F T L+ + L GN L+ L
Sbjct: 372 NIIHTLMKAD---LMDYFTLEMLHLGNN-RIEVLEEGSFMNLTRLQKLYLNGNHLTKLYK 427
Query: 431 SHF-PLERISFLDLSDN 446
F L + +L L N
Sbjct: 428 GMFLGLSSLEYLYLEYN 444
Score = 45 (20.9 bits), Expect = 2.3e-14, Sum P(3) = 2.3e-14
Identities = 10/38 (26%), Positives = 20/38 (52%)
Query: 558 ILMYFIYRKRALWKNKINRNLKHQSS-YVDNCMNSHPT 594
I+++ ++R+R K K+ L+ S ++ M H T
Sbjct: 627 IVVFVLHRRRRYKKKKVEEQLRDTSPVHLQYSMYGHKT 664
Score = 39 (18.8 bits), Expect = 4.3e-07, Sum P(3) = 4.3e-07
Identities = 7/26 (26%), Positives = 15/26 (57%)
Query: 508 VLNNLKCSSPPDIKGLEVKAVPENSV 533
++ ++ C SPP KG + + + S+
Sbjct: 241 IIGDVICYSPPLFKGSILSRLKKESI 266
>RGD|68429 [details] [associations]
symbol:Igfals "insulin-like growth factor binding protein, acid
labile subunit" species:10116 "Rattus norvegicus" [GO:0005520
"insulin-like growth factor binding" evidence=IDA] [GO:0005634
"nucleus" evidence=ISO] [GO:0007155 "cell adhesion" evidence=IEA]
[GO:0007165 "signal transduction" evidence=TAS] [GO:0008022 "protein
C-terminus binding" evidence=IPI] [GO:0042567 "insulin-like growth
factor ternary complex" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 RGD:68429
GO:GO:0043231 GO:GO:0005634 GO:GO:0007165 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0007155 CTD:3483 HOGENOM:HOG000033909 HOVERGEN:HBG000327
OrthoDB:EOG4FFD1R GO:GO:0005520 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0042567 EMBL:S46785 IPI:IPI00202416 PIR:JC1282
RefSeq:NP_445781.2 UniGene:Rn.7327 ProteinModelPortal:P35859
STRING:P35859 PRIDE:P35859 GeneID:79438 KEGG:rno:79438
UCSC:RGD:68429 InParanoid:P35859 NextBio:614812 ArrayExpress:P35859
Genevestigator:P35859 GermOnline:ENSRNOG00000015061 Uniprot:P35859
Length = 603
Score = 197 (74.4 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 62/224 (27%), Positives = 97/224 (43%)
Query: 79 LDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVIN 138
L L N++ L F + L +L++S N + L + F+GL L L+L +N + V+
Sbjct: 127 LHLERNRLRNLAVGLFTHTPSLASLSLSSNLLGRLEEGLFQGLSHLWDLNLGWNSLVVLP 186
Query: 139 KTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQS 198
T F+ +L L+L+ N +TY + + +F L LR L L N + V NV +LP
Sbjct: 187 DTVFQGLGNLHELVLAGNKLTYLQPA-LFCGLGELRELDLSRNALRSVKANVFVHLPR-- 243
Query: 199 LHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXX 258
L LYL+ NLI V +F + L L L L LH
Sbjct: 244 LQKLYLDRNLITAVAPGAF-LGMKALRWLDLSHNRVAGLMEDTFPGLLGLHVLRLAHNAI 302
Query: 259 XAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
++ + L L L L N + F+ L L+++ +N
Sbjct: 303 ASLRPRTFKDLHFLEELQLGHNRIRQLGERTFEGLGQLEVLTLN 346
Score = 197 (74.4 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 95/397 (23%), Positives = 164/397 (41%)
Query: 58 LRENRISNVHYTLSFYI-ELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKD 116
L NR+ N+ L + L SL LS N + L F+ + L +LN+ +N + L
Sbjct: 129 LERNRLRNLAVGLFTHTPSLASLSLSSNLLGRLEEGLFQGLSHLWDLNLGWNSLVVLPDT 188
Query: 117 TFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRIL 176
F+GL L L L+ NK++ + F L L LS N + + + +F L L+ L
Sbjct: 189 VFQGLGNLHELVLAGNKLTYLQPALFCGLGELRELDLSRNALRSVK-ANVFVHLPRLQKL 247
Query: 177 KLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXX 236
LD N I V + ++L +L L+ N + +++++FP L LH L L
Sbjct: 248 YLDRNLITAVAPGAFLGM--KALRWLDLSHNRVAGLMEDTFP-GLLGLHVLRLAHNAIAS 304
Query: 237 XXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSL 296
L L + + L L L L+ N + + AF LF++
Sbjct: 305 LRPRTFKDLHFLEELQLGHNRIRQLGERTFEGLGQLEVLTLNDNQITEVRVGAFSGLFNV 364
Query: 297 KLVKI--NLIPNL-DSIDQXXXXXXXXXXXXXXXXXAFSLTPLGTLKCDRLDLSGNNFSN 353
++ + N + +L + + Q T G RL L N+ S+
Sbjct: 365 AVMNLSGNCLRSLPERVFQGLDKLHSLHLEHSCLGHVRLHTFAGLSGLRRLFLRDNSISS 424
Query: 354 IDSVAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGN 412
I+ + L +L++++L N L + ++ F LE ++++ N L L +++
Sbjct: 425 IEEQSLAGLS--ELLELDLTTNRLTHLPRQLFQGLGHLEYLLLSYNQ-LTTLSAEVLGPL 481
Query: 413 TNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPL 448
+ + N L L F L R+ +L L +N L
Sbjct: 482 QRAFWLDISHNHLETLAEGLFSSLGRVRYLSLRNNSL 518
Score = 176 (67.0 bits), Expect = 5.1e-12, Sum P(2) = 5.1e-12
Identities = 67/252 (26%), Positives = 113/252 (44%)
Query: 56 IILRENRISNVHYTLSFYI-ELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALS 114
++L N+++ + L + ELR LDLS N + + ++ F + +L L + N I+A++
Sbjct: 199 LVLAGNKLTYLQPALFCGLGELRELDLSRNALRSVKANVFVHLPRLQKLYLDRNLITAVA 258
Query: 115 KDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLR 174
F G+K L+ LDLS+N+++ + + F L L +L L+ N I F L L
Sbjct: 259 PGAFLGMKALRWLDLSHNRVAGLMEDTFPGLLGLHVLRLAHNAIASLRP-RTFKDLHFLE 317
Query: 175 ILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXX 234
L+L +N+I + L L L LN+N I V +F L N+ + L
Sbjct: 318 ELQLGHNRIRQLGERTFEGLGQ--LEVLTLNDNQITEVRVGAFS-GLFNVAVMNLSGNCL 374
Query: 235 XXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLF 294
L LH + + LS L L L N+ S+I+ + L
Sbjct: 375 RSLPERVFQGLDKLHSLHLEHSCLGHVRLHTFAGLSGLRRLFLRDNSISSIEEQSLAGLS 434
Query: 295 SLKLVKINLIPN 306
+L++++L N
Sbjct: 435 --ELLELDLTTN 444
Score = 145 (56.1 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 39/137 (28%), Positives = 71/137 (51%)
Query: 75 ELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKI 134
+L SL L + + + H F + L L + N IS++ + + GL EL LDL+ N++
Sbjct: 387 KLHSLHLEHSCLGHVRLHTFAGLSGLRRLFLRDNSISSIEEQSLAGLSELLELDLTTNRL 446
Query: 135 SVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNL 194
+ + + F+ HLE L+LS+N +T +E+ L+ L + +N + + + S+L
Sbjct: 447 THLPRQLFQGLGHLEYLLLSYNQLTTLS-AEVLGPLQRAFWLDISHNHLETLAEGLFSSL 505
Query: 195 PHQSLHYLYLNENLIET 211
+ YL L N ++T
Sbjct: 506 GR--VRYLSLRNNSLQT 520
Score = 116 (45.9 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 37/130 (28%), Positives = 64/130 (49%)
Query: 53 VQTIILRENRISNVH-YTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEIS 111
++ + LR+N IS++ +L+ EL LDL+ N++ L F+ L L +SYN+++
Sbjct: 412 LRRLFLRDNSISSIEEQSLAGLSELLELDLTTNRLTHLPRQLFQGLGHLEYLLLSYNQLT 471
Query: 112 ALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLK 171
LS + L+ LD+S+N + + + F + L L N++ + FS
Sbjct: 472 TLSAEVLGPLQRAFWLDISHNHLETLAEGLFSSLGRVRYLSLRNNSL------QTFSPQP 525
Query: 172 SLRILKLDNN 181
L L LD N
Sbjct: 526 GLERLWLDAN 535
Score = 65 (27.9 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 510 NNLKCSSPPDIKGLEVKAVPENS-VHC 535
NN+ C+ P ++ GL+++ V E VHC
Sbjct: 577 NNITCAGPANVSGLDLRDVSETHFVHC 603
>RGD|1561361 [details] [associations]
symbol:Slitrk2 "SLIT and NTRK-like family, member 2"
species:10116 "Rattus norvegicus" [GO:0007409 "axonogenesis"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
RGD:1561361 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007409 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00680000099775 OMA:LQADYNY OrthoDB:EOG4GTKC9
IPI:IPI00361290 Ensembl:ENSRNOT00000015401 Uniprot:D3ZK41
Length = 846
Score = 154 (59.3 bits), Expect = 2.5e-14, Sum P(3) = 2.5e-14
Identities = 58/214 (27%), Positives = 98/214 (45%)
Query: 1 MNYFLTCIFLILALTKLNKAICPSRCQCFDQK--LEASCTDAGLEVVPIQLNPE--VQTI 56
++ F L + K K IC RC C +++ L +C + G V + P+ + +
Sbjct: 8 LSVFTVAGILQIESRKTAKDICKIRCLCEEKENVLNINCENKGFTTVSLLQPPQYRIYQL 67
Query: 57 ILRENRISNVHYTLSF--YIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALS 114
L N ++ + Y F Y +L L N + + F L L+++ N++ L
Sbjct: 68 FLNGNLLTRL-YPNEFVNYSNAVTLHLGNNGLQEIRPGAFSGLKTLKRLHLNNNKLEVLR 126
Query: 115 KDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLR 174
+DTF GL+ L+ L YN IS I AF L++LIL+ +N+ S +F + L
Sbjct: 127 EDTFLGLESLEYLQADYNYISTIEAGAFSKLNKLKVLILN-DNLLLSLPSNVFRFVL-LT 184
Query: 175 ILKLDNNQILDVP-NNVLSNLPHQSLHYLYLNEN 207
L L N++ +P VL ++ + + L EN
Sbjct: 185 HLDLRGNRLKVMPFAGVLEHIG--GIMEIQLEEN 216
Score = 152 (58.6 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 58/190 (30%), Positives = 81/190 (42%)
Query: 15 TKLNKAI-CPSRCQCFDQK----LEASCTDAGL-EVVPIQLNP-EVQTIILRENRISNVH 67
TK A+ CPS C C Q L +C + + +Q P + + L N + V+
Sbjct: 333 TKSPVALTCPSSCVCTSQSSDNGLNVNCQERKFTNISDLQPKPTSPKKLYLTGNYLQTVY 392
Query: 68 YT-LSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKT 126
L Y L L L N+I V+ F L L ++ N + L F GL+ L+
Sbjct: 393 KNDLLEYTSLDLLHLGNNRIAVIQEGAFTNLTSLRRLYLNGNYLEVLYPSMFDGLQSLQY 452
Query: 127 LDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDV 186
L L YN I I F ++L+LL L+ N + D+ IF R L L NN +
Sbjct: 453 LYLEYNVIKEIKPLTFDALINLQLLFLNNNLLRSLPDN-IFGGTALTR-LNLRNNHFSHL 510
Query: 187 P-NNVLSNLP 195
P VL LP
Sbjct: 511 PVKGVLDQLP 520
Score = 118 (46.6 bits), Expect = 2.5e-14, Sum P(3) = 2.5e-14
Identities = 40/127 (31%), Positives = 68/127 (53%)
Query: 332 SLTPLGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKI--NLIPNLDSIDQRAFVDNIQ 389
+ T L +L+ RL L+GN + F L SL+ + + N+I + + A + N+Q
Sbjct: 419 AFTNLTSLR--RLYLNGNYLEVLYPSMFDGLQSLQYLYLEYNVIKEIKPLTFDALI-NLQ 475
Query: 390 LETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFPLERI-SFL--DLSDN 446
L + +N N+ L+ LP +F G T L ++L+ N SHL L+++ +F+ DL +N
Sbjct: 476 L--LFLNNNL-LRSLPDNIF-GGTALTRLNLRNNHFSHLPVKGV-LDQLPAFIQIDLQEN 530
Query: 447 PLHCDCN 453
P C C+
Sbjct: 531 PWDCTCD 537
Score = 108 (43.1 bits), Expect = 2.1e-09, Sum P(3) = 2.1e-09
Identities = 38/129 (29%), Positives = 59/129 (45%)
Query: 97 QNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFN 156
Q ++ L ++ N ++ L + F TL L N + I AF L+ L L+ N
Sbjct: 61 QYRIYQLFLNGNLLTRLYPNEFVNYSNAVTLHLGNNGLQEIRPGAFSGLKTLKRLHLNNN 120
Query: 157 NITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNS 216
+ + + F L+SL L+ D N I + S L L L LN+NL+ ++ N
Sbjct: 121 KLEVLRE-DTFLGLESLEYLQADYNYISTIEAGAFSKL--NKLKVLILNDNLLLSLPSNV 177
Query: 217 FPFTL-TNL 224
F F L T+L
Sbjct: 178 FRFVLLTHL 186
Score = 71 (30.1 bits), Expect = 1.0e-05, Sum P(3) = 1.0e-05
Identities = 27/108 (25%), Positives = 41/108 (37%)
Query: 195 PHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXX 254
P ++ L+LN NL+ + N F +N TL L L+TL
Sbjct: 60 PQYRIYQLFLNGNLLTRLYPNEF-VNYSNAVTLHLGNNGLQEIRPGAFSGLKTLKRLHLN 118
Query: 255 XXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
+ L +L L N S I++ AF L LK++ +N
Sbjct: 119 NNKLEVLREDTFLGLESLEYLQADYNYISTIEAGAFSKLNKLKVLILN 166
Score = 52 (23.4 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 26/98 (26%), Positives = 45/98 (45%)
Query: 351 FSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNLKQLPSKLF 409
F+NI + K S K K+ L N L ++ + ++ L+ + + N + + F
Sbjct: 365 FTNISDLQPKPT-SPK--KLYLTGNYLQTVYKNDLLEYTSLDLLHLGNN-RIAVIQEGAF 420
Query: 410 QGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDN 446
T+L+ + L GN L L S F L+ + +L L N
Sbjct: 421 TNLTSLRRLYLNGNYLEVLYPSMFDGLQSLQYLYLEYN 458
Score = 40 (19.1 bits), Expect = 2.5e-14, Sum P(3) = 2.5e-14
Identities = 8/32 (25%), Positives = 16/32 (50%)
Query: 507 IVLNNLKCSSPPDIKGLEVKAVPENSVHCESN 538
+++N + C SP G +K + ++ C N
Sbjct: 552 VIINEVTCESPAKHAGEILKFLGREAI-CPDN 582
>ZFIN|ZDB-GENE-030827-4 [details] [associations]
symbol:tpbga "trophoblast glycoprotein a"
species:7955 "Danio rerio" [GO:0090090 "negative regulation of
canonical Wnt receptor signaling pathway" evidence=IMP] [GO:2000052
"positive regulation of non-canonical Wnt receptor signaling
pathway" evidence=IMP] InterPro:IPR001611 PROSITE:PS51450
ZFIN:ZDB-GENE-030827-4 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0090090 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 HSSP:Q9BZR6 GO:GO:2000052 CTD:100507050
HOVERGEN:HBG053843 EMBL:JN653073 EMBL:AB097825 IPI:IPI00508902
RefSeq:NP_919373.1 UniGene:Dr.25206 GeneID:373095 KEGG:dre:373095
InParanoid:Q7T2W3 NextBio:20813366 Uniprot:Q7T2W3
Length = 372
Score = 210 (79.0 bits), Expect = 2.8e-14, P = 2.8e-14
Identities = 67/228 (29%), Positives = 110/228 (48%)
Query: 10 LILALTKLNKAICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYT 69
L A +CP+ C+C + L C L +P + + + + N IS +
Sbjct: 14 LCAAAVSAGALVCPTGCECSEAALTVKCVSKDLRDIPSGIPGYTRNLFITGNHISQIGPE 73
Query: 70 LSFY-IE-LRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFK-GLKELKT 126
SF +E + +L LS N+I+ + SH F L +L++S N+++ + + F + L+
Sbjct: 74 -SFQGLENVTNLSLSNNRISEVKSHTFSSLRSLRSLDLSNNQLAVIHPEAFTVQSRMLRE 132
Query: 127 LDLS---YNKISVIN-KTAFRDTLHLELLILSF-NNITYFEDSEIFSSLKSLRILKLDNN 181
L+LS YN SV++ T+ R + +LL+L +N F S IF L LR L+L NN
Sbjct: 133 LNLSRALYNHSSVMDLATSLRWSSLSDLLVLDLXSNGLVFLPSGIFCHLVGLRRLQLGNN 192
Query: 182 QILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLAL 229
I+ + N + L H L L L N + T+ + + L LH+ L
Sbjct: 193 SIVSIHNGTFTGLDH--LQELDLTHNALRTLREEALK-ELEQLHSARL 237
Score = 163 (62.4 bits), Expect = 5.7e-09, P = 5.7e-09
Identities = 60/233 (25%), Positives = 106/233 (45%)
Query: 25 RCQCFDQKLEASCTDAGLEVVPI--QLNPEVQTIILRENRISNVHYTLSFYIELRSLDLS 82
RC L A+ AG V P + + T+ + ++ + Y R+L ++
Sbjct: 6 RCAVVLGLLCAAAVSAGALVCPTGCECSEAALTVKCVSKDLRDIPSGIPGYT--RNLFIT 63
Query: 83 VNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAF 142
N I+ +G +F+ + NL++S N IS + TF L+ L++LDLS N+++VI+ AF
Sbjct: 64 GNHISQIGPESFQGLENVTNLSLSNNRISEVKSHTFSSLRSLRSLDLSNNQLAVIHPEAF 123
Query: 143 R------DTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPH 196
L+L + + +++ S +SSL L +L L +N ++ +P+ + +L
Sbjct: 124 TVQSRMLRELNLSRALYNHSSVMDLATSLRWSSLSDLLVLDLXSNGLVFLPSGIFCHLV- 182
Query: 197 QSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLH 249
L L L N I ++ + +F L +L L L L LH
Sbjct: 183 -GLRRLQLGNNSIVSIHNGTFT-GLDHLQELDLTHNALRTLREEALKELEQLH 233
Score = 138 (53.6 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 57/178 (32%), Positives = 82/178 (46%)
Query: 53 VQTIILRENRISNVH-YTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLN-LNIS---Y 107
V + L NRIS V +T S LRSLDLS N++ V+ F Q+++L LN+S Y
Sbjct: 81 VTNLSLSNNRISEVKSHTFSSLRSLRSLDLSNNQLAVIHPEAFTVQSRMLRELNLSRALY 140
Query: 108 NEISALSKDT---FKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDS 164
N S + T + L +L LDL N + + F + L L L N+I +
Sbjct: 141 NHSSVMDLATSLRWSSLSDLLVLDLXSNGLVFLPSGIFCHLVGLRRLQLGNNSIVSIHNG 200
Query: 165 EIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLT 222
F+ L L+ L L +N + + L L + LH L+ + DN PFT T
Sbjct: 201 T-FTGLDHLQELDLTHNALRTLREEALKEL--EQLHSARLH------LADN--PFTCT 247
>ZFIN|ZDB-GENE-080327-22 [details] [associations]
symbol:flrt1a "fibronectin leucine rich
transmembrane 1a" species:7955 "Danio rerio" [GO:0005515 "protein
binding" evidence=IPI] [GO:0042802 "identical protein binding"
evidence=IDA] InterPro:IPR001611 InterPro:IPR003961 PROSITE:PS50853
PROSITE:PS51450 SMART:SM00060 ZFIN:ZDB-GENE-080327-22
SUPFAM:SSF49265 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0042802 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00700000104442 EMBL:CU856362 IPI:IPI00876719
Ensembl:ENSDART00000114913 Bgee:F1QMS9 Uniprot:F1QMS9
Length = 684
Score = 216 (81.1 bits), Expect = 2.8e-14, P = 2.8e-14
Identities = 83/285 (29%), Positives = 127/285 (44%)
Query: 21 ICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHY--TLSFYIELRS 78
+CPS C+C D+ C D GL +P L P + L+ N I N +L ++ +R
Sbjct: 37 VCPSVCRC-DEDF-IYCNDRGLSAIP-PLPPSATVLYLQNNHIDNAGLPRSLEYHTTVRV 93
Query: 79 LDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVIN 138
+ L N+++ H + L++ N I L + L L+ L L N +S ++
Sbjct: 94 IYLYDNELDDFPMH---LPPSIRELHLQDNNIRVLPRAALARLPLLEKLHLDDNSVSTVS 150
Query: 139 --KTAFRDTLHLELLILSFNNITYFEDSEIFSSLK-SLRILKLDNNQILDVPNNVLSNLP 195
AF D L LL LS N++ S I S L SL L+LD+N+I +P + L
Sbjct: 151 IEDQAFADNPRLRLLFLSRNHL-----SSIPSGLPASLEELRLDDNRISTIPTHAFRGL- 204
Query: 196 HQSLHYLYLNENLI--ETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXX 253
SL L L+ NL+ + + D++F L+NL L+L + L + H
Sbjct: 205 -SSLRRLVLDGNLLANQRIADDTFS-RLSNLTELSLVRNSLQTPP----LNLPSAHLQRL 258
Query: 254 XXXXXXAI--PTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSL 296
I P L + L LDLSGNN + + F+ L +L
Sbjct: 259 SLQDNNLIHVPRGSLDGMRRLQRLDLSGNNLTTLPRGLFRDLDTL 303
>RGD|1566005 [details] [associations]
symbol:Flrt3 "fibronectin leucine rich transmembrane protein 3"
species:10116 "Rattus norvegicus" [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR001611 InterPro:IPR003961 PROSITE:PS50853
PROSITE:PS51450 SMART:SM00060 RGD:1566005 GO:GO:0016021
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007155 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 EMBL:CH473949 HOGENOM:HOG000290188 HOVERGEN:HBG051629
KO:K16362 CTD:23767 OMA:SPYRVCM OrthoDB:EOG4NCMCB EMBL:BC160843
IPI:IPI00368800 RefSeq:NP_001119763.1 UniGene:Rn.220263
ProteinModelPortal:B1H234 STRING:B1H234 PRIDE:B1H234
Ensembl:ENSRNOT00000006454 GeneID:366205 KEGG:rno:366205
UCSC:RGD:1566005 GeneTree:ENSGT00700000104442 NextBio:688953
Genevestigator:B1H234 Uniprot:B1H234
Length = 649
Score = 215 (80.7 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
Identities = 85/294 (28%), Positives = 136/294 (46%)
Query: 9 FLILALTKLNKAICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHY 68
F + L+ + K+ CPS C+C D C D L +P+ + + T+ L+ N+I+NV
Sbjct: 19 FQVAPLSVMAKS-CPSVCRC-DAGF-IYCNDRSLTSIPVGIPEDATTLYLQNNQINNV-- 73
Query: 69 TLSFYIELRSLDLSVNKINVLGSHNFEYQNKL----LNLNISYNEISALSKDTFKGLKEL 124
+L++L L V +I + + E+ L L++ N I ++ D+ + L
Sbjct: 74 --GIPSDLKNL-LKVQRIYLYHNSLDEFPTNLPKYVKELHLQENNIRTITYDSLSKIPYL 130
Query: 125 KTLDLSYNKISVIN--KTAFRDTLHLELLILSFNNITYFEDSEIFSSL-KSLRILKLDNN 181
+ L L N +S ++ + AFRD+ +L LL LS N++ S I L +++ L+LD+N
Sbjct: 131 EELHLDDNSVSAVSIEEGAFRDSNYLRLLFLSRNHL-----STIPGGLPRTIEELRLDDN 185
Query: 182 QILDVPNNVLSNLPHQSLHYLYLNENLIETV-LDNSFPFTLTNLHTLALXXXXXXXXXXX 240
+I + + L L SL L L+ NL+ L + F L NL L+L
Sbjct: 186 RISTISSPSLHGLT--SLKRLVLDGNLLNNHGLGDKVFFNLVNLTELSLVRNSLTAAPVN 243
Query: 241 XXVT-LRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSL 293
T LR L+ +P S L L LD+S NN SN+ F L
Sbjct: 244 LPGTSLRKLYLQDNHINR---VPPNAFSYLRQLYRLDMSNNNLSNLPQGIFDDL 294
Score = 46 (21.3 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
Identities = 9/37 (24%), Positives = 19/37 (51%)
Query: 504 SLTIVLN--NLKCSSPPDIKGLEVKAVPENSVHCESN 538
SL + +N L C +P ++G+ +K + C+ +
Sbjct: 322 SLPVKVNVRGLMCQAPEKVRGMAIKDLSAELFDCKDS 358
>MGI|MGI:2442298 [details] [associations]
symbol:Lingo2 "leucine rich repeat and Ig domain containing
2" species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 MGI:MGI:2442298 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 InterPro:IPR025875 Pfam:PF12799
HSSP:Q15772 eggNOG:NOG278536 GeneTree:ENSGT00690000101682
HOGENOM:HOG000246971 HOVERGEN:HBG057546 CTD:158038 OMA:DQDSGMY
OrthoDB:EOG4NS3B7 EMBL:AK035778 EMBL:AK045639 EMBL:AK141568
EMBL:BC090619 EMBL:BC145692 IPI:IPI00341267 RefSeq:NP_001159471.1
RefSeq:NP_001159472.1 RefSeq:NP_001159473.1 RefSeq:NP_780725.2
UniGene:Mm.132507 ProteinModelPortal:Q3URE9 SMR:Q3URE9
PhosphoSite:Q3URE9 PaxDb:Q3URE9 PRIDE:Q3URE9
Ensembl:ENSMUST00000065173 Ensembl:ENSMUST00000098151
Ensembl:ENSMUST00000108122 Ensembl:ENSMUST00000108124
Ensembl:ENSMUST00000164772 GeneID:242384 KEGG:mmu:242384
InParanoid:Q3URE9 NextBio:385317 Bgee:Q3URE9 CleanEx:MM_LINGO2
Genevestigator:Q3URE9 Uniprot:Q3URE9
Length = 606
Score = 215 (80.7 bits), Expect = 2.9e-14, P = 2.9e-14
Identities = 80/295 (27%), Positives = 123/295 (41%)
Query: 10 LILALTKLNKAI-CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVH- 67
L + L + I CP+RC+C Q SC L +P + E + + L +NR+ +++
Sbjct: 15 LAVVLLLMGSTIGCPARCECSAQNKSVSCHRRRLLAIPEGIPIETKILDLSKNRLKSINP 74
Query: 68 YTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTL 127
Y L +DLS N I + F L +L + N + + F GL L L
Sbjct: 75 EEFISYPLLEEIDLSDNIIANVEPGAFNNLFNLRSLRLKGNRLKLVPLGVFTGLSNLTKL 134
Query: 128 DLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVP 187
D+S NKI ++ F+D +L+ L + N++ Y FS L SL L L+ + VP
Sbjct: 135 DISENKIVILLDYMFQDLHNLKSLEVGDNDLVYISH-RAFSGLLSLEQLTLEKCNLTAVP 193
Query: 188 NNVLSNLPHQ-SLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLR 246
LS+L +LH +LN N + F L NL + L
Sbjct: 194 TEALSHLRSLIALHLKHLNINNMPVYAFKRL-FHLKNLEIDYWPLLDLMPANSLYGLNLT 252
Query: 247 TLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKI 301
+L +P L L +L+LS N S I++ F L L+ + I
Sbjct: 253 SL---SITNTNLSTVPFLAFKHLVYLTHLNLSYNPISTIEAGMFSDLIRLQELHI 304
Score = 155 (59.6 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 72/262 (27%), Positives = 115/262 (43%)
Query: 51 PEVQTIILRENRISNVHY-TLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNE 109
P ++ I L +N I+NV + LRSL L N++ ++ F + L L+IS N+
Sbjct: 81 PLLEEIDLSDNIIANVEPGAFNNLFNLRSLRLKGNRLKLVPLGVFTGLSNLTKLDISENK 140
Query: 110 ISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSS 169
I L F+ L LK+L++ N + I+ AF L LE L L N+T +E S
Sbjct: 141 IVILLDYMFQDLHNLKSLEVGDNDLVYISHRAFSGLLSLEQLTLEKCNLTAVP-TEALSH 199
Query: 170 LKSLRILKLDNNQILDVPNNVLSNLPH-QSLHYLYLNENLIETVLDNSFPFTLTNLHTLA 228
L+SL L L + I ++P L H ++L Y L++ + NS + L NL +L+
Sbjct: 200 LRSLIALHLKHLNINNMPVYAFKRLFHLKNLEIDYWP--LLDLMPANSL-YGL-NLTSLS 255
Query: 229 LXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSV 288
+ L L I S L L L + G I+
Sbjct: 256 ITNTNLSTVPFLAFKHLVYLTHLNLSYNPISTIEAGMFSDLIRLQELHIVGAQLRTIEPH 315
Query: 289 AFKSLFSLKLVKI--NLIPNLD 308
+F+ L L+++ + NL+ L+
Sbjct: 316 SFQGLRFLRVLNVSQNLLETLE 337
Score = 139 (54.0 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 74/312 (23%), Positives = 124/312 (39%)
Query: 146 LHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLN 205
+ ++L LS N + E F S L + L +N I +V +NL +L L L
Sbjct: 57 IETKILDLSKNRLKSINPEE-FISYPLLEEIDLSDNIIANVEPGAFNNL--FNLRSLRLK 113
Query: 206 ENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQ 265
N ++ V F L+NL L + L L I +
Sbjct: 114 GNRLKLVPLGVFT-GLSNLTKLDISENKIVILLDYMFQDLHNLKSLEVGDNDLVYISHRA 172
Query: 266 LSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQXXXXXXXXXXXXX 325
S L +L L L N + + + A L SL + + + N++++
Sbjct: 173 FSGLLSLEQLTLEKCNLTAVPTEALSHLRSLIALHLKHL-NINNMPVYAFKRLFHLKNLE 231
Query: 326 XXXXAF-SLTPLGTL---KCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQ 381
L P +L L ++ N S + +AFK L L + ++ P + +I+
Sbjct: 232 IDYWPLLDLMPANSLYGLNLTSLSITNTNLSTVPFLAFKHLVYLTHLNLSYNP-ISTIEA 290
Query: 382 RAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFPLER-ISF 440
F D I+L+ + I L+ + FQG L+ +++ N L LE + F R +
Sbjct: 291 GMFSDLIRLQELHI-VGAQLRTIEPHSFQGLRFLRVLNVSQNLLETLEENVFSSPRALEV 349
Query: 441 LDLSDNPLHCDC 452
L +++NPL CDC
Sbjct: 350 LSINNNPLACDC 361
>RGD|2724 [details] [associations]
symbol:Gp5 "glycoprotein V (platelet)" species:10116 "Rattus
norvegicus" [GO:0005518 "collagen binding" evidence=IEA;ISO]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007160 "cell-matrix
adhesion" evidence=IEA;ISO] [GO:0007596 "blood coagulation"
evidence=IEA] [GO:0009986 "cell surface" evidence=IDA] [GO:0010544
"negative regulation of platelet activation" evidence=IEA;ISO]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 RGD:2724 GO:GO:0016021 GO:GO:0009986 GO:GO:0007596
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007160 InterPro:IPR000372 SMART:SM00013
GO:GO:0010544 CTD:2814 HOGENOM:HOG000112798 HOVERGEN:HBG005906
KO:K06260 OrthoDB:EOG4JHCFD EMBL:Z69594 IPI:IPI00195678
RefSeq:NP_036927.1 UniGene:Rn.138111 ProteinModelPortal:O08770
STRING:O08770 PRIDE:O08770 GeneID:25259 KEGG:rno:25259 UCSC:RGD:2724
InParanoid:O08770 NextBio:605903 Genevestigator:O08770
GermOnline:ENSRNOG00000038540 Uniprot:O08770
Length = 567
Score = 214 (80.4 bits), Expect = 3.2e-14, P = 3.2e-14
Identities = 98/372 (26%), Positives = 148/372 (39%)
Query: 88 VLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLH 147
VL SH+F L L +S + ISA+ TF L +LKTL L+ NKIS + + +
Sbjct: 64 VLQSHSFSGMTVLQRLMLSDSHISAIDPGTFNDLVKLKTLRLTRNKISHLPRAILDKMVL 123
Query: 148 LELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNEN 207
LE L L N + D +F L +LR L L+ NQ+ +P N+ S+L L L L+ N
Sbjct: 124 LEQLFLDHNALRDL-DQNLFQKLLNLRDLCLNQNQLSFLPANLFSSLG--KLKVLDLSRN 180
Query: 208 LIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLS 267
+ T L L L L L L +I
Sbjct: 181 NL-THLPQGLLGAQIKLEKLLLYSNRLMSLDSGLLANLGALTELRLERNHLRSIAPGAFD 239
Query: 268 KLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQXXXXXXXXXXXXXX 326
L L L LSGN ++ F L L ++ L N L+ + +
Sbjct: 240 SLGNLSTLTLSGNLLESLPPALF--LHVSWLTRLTLFENPLEELPEVLFGEMAGLRELWL 297
Query: 327 XXXAFSLTPLGTLK----CDRLDLSGNNF-SNIDSVAFKSLFSLKLVKINLIPNLDSIDQ 381
P + L L+ N S + F L L+++ ++ L+ + +
Sbjct: 298 NGTHLRTLPAAAFRNLSGLQTLGLTRNPLLSALPPGMFHGLTELRVLAVHTNA-LEELPE 356
Query: 382 RAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISF 440
A +L V + N L+ LP LF+ ++L +V L+ N L L F L +++
Sbjct: 357 DALRGLGRLRQVSLRHN-RLRALPRTLFRNLSSLVTVQLEHNQLKTLPGDVFAALPQLTR 415
Query: 441 LDLSDNPLHCDC 452
+ L NP CDC
Sbjct: 416 VLLGHNPWLCDC 427
Score = 190 (71.9 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 81/352 (23%), Positives = 155/352 (44%)
Query: 53 VQTIILRENRISNVHY-TLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEIS 111
+Q ++L ++ IS + T + ++L++L L+ NKI+ L + L L + +N +
Sbjct: 76 LQRLMLSDSHISAIDPGTFNDLVKLKTLRLTRNKISHLPRAILDKMVLLEQLFLDHNALR 135
Query: 112 ALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLK 171
L ++ F+ L L+ L L+ N++S + F L++L LS NN+T+ + + +K
Sbjct: 136 DLDQNLFQKLLNLRDLCLNQNQLSFLPANLFSSLGKLKVLDLSRNNLTHLPQGLLGAQIK 195
Query: 172 SLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXX 231
++L L +N+++ + + +L+NL +L L L N + ++ +F +L NL TL L
Sbjct: 196 LEKLL-LYSNRLMSLDSGLLANLG--ALTELRLERNHLRSIAPGAFD-SLGNLSTLTLSG 251
Query: 232 XXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFK 291
+ + L +P +++ L L L+G + + + AF+
Sbjct: 252 NLLESLPPALFLHVSWLTRLTLFENPLEELPEVLFGEMAGLRELWLNGTHLRTLPAAAFR 311
Query: 292 SLFSLKLVKINLIPNLDSIDQXXXXXXXXXXXXXXXXXAFSLTPLGTLK-CDRL---DLS 347
+L L+ + + P L ++ A P L+ RL L
Sbjct: 312 NLSGLQTLGLTRNPLLSALPPGMFHGLTELRVLAVHTNALEELPEDALRGLGRLRQVSLR 371
Query: 348 GNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINEN 398
N + F++L SL V + L N L ++ F QL V++ N
Sbjct: 372 HNRLRALPRTLFRNLSSL--VTVQLEHNQLKTLPGDVFAALPQLTRVLLGHN 421
Score = 163 (62.4 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 68/294 (23%), Positives = 121/294 (41%)
Query: 11 ILALTKLNKAICPSRCQCFDQKLEASCTDAGL-EVVPIQLNPEVQTIIL-RENRISNVHY 68
+L+L CP C+C + C+ + + + L + I+L R +R +
Sbjct: 10 VLSLVGAQPFPCPKTCKCVVRDA-VQCSGGSVAHIAELGLPTNLTHILLFRMDRGVLQSH 68
Query: 69 TLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLD 128
+ S L+ L LS + I+ + F KL L ++ N+IS L + + L+ L
Sbjct: 69 SFSGMTVLQRLMLSDSHISAIDPGTFNDLVKLKTLRLTRNKISHLPRAILDKMVLLEQLF 128
Query: 129 LSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPN 188
L +N + +++ F+ L+L L L+ N +++ + +FSSL L++L L N + +P
Sbjct: 129 LDHNALRDLDQNLFQKLLNLRDLCLNQNQLSFLP-ANLFSSLGKLKVLDLSRNNLTHLPQ 187
Query: 189 NVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTL 248
+L L L L N + + LD+ L L L L +L L
Sbjct: 188 GLLG--AQIKLEKLLLYSNRLMS-LDSGLLANLGALTELRLERNHLRSIAPGAFDSLGNL 244
Query: 249 HXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
++P +S L L L N + V F + L+ + +N
Sbjct: 245 STLTLSGNLLESLPPALFLHVSWLTRLTLFENPLEELPEVLFGEMAGLRELWLN 298
>MGI|MGI:2679448 [details] [associations]
symbol:Slitrk5 "SLIT and NTRK-like family, member 5"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0007268 "synaptic transmission" evidence=IMP]
[GO:0007409 "axonogenesis" evidence=IDA] [GO:0007625 "grooming
behavior" evidence=IMP] [GO:0009410 "response to xenobiotic
stimulus" evidence=IMP] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=ISS] [GO:0021756
"striatum development" evidence=IMP] [GO:0030534 "adult behavior"
evidence=IMP] [GO:0043588 "skin development" evidence=IMP]
[GO:0048813 "dendrite morphogenesis" evidence=IMP] [GO:0072358
"cardiovascular system development" evidence=IMP] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:2679448 GO:GO:0016021
GO:GO:0043588 GO:GO:0007268 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0048813 GO:GO:0007409
GO:GO:0030534 GO:GO:0009410 InterPro:IPR000372 SMART:SM00013
GO:GO:0007625 GO:GO:0021756 GO:GO:0072358 HOGENOM:HOG000290667
HOVERGEN:HBG056407 GeneTree:ENSGT00680000099775 eggNOG:NOG147171
CTD:26050 OMA:HHRGPAL OrthoDB:EOG4X97GH EMBL:AB097574 EMBL:BC065107
EMBL:AK011457 IPI:IPI00329844 IPI:IPI00410889 RefSeq:NP_942565.1
UniGene:Mm.235097 UniGene:Mm.417152 ProteinModelPortal:Q810B7
SMR:Q810B7 STRING:Q810B7 PhosphoSite:Q810B7 PRIDE:Q810B7
Ensembl:ENSMUST00000042767 GeneID:75409 KEGG:mmu:75409
UCSC:uc011zpr.1 InParanoid:Q810B7 NextBio:342932 Bgee:Q810B7
CleanEx:MM_SLITRK5 Genevestigator:Q810B7
GermOnline:ENSMUSG00000033214 Uniprot:Q810B7
Length = 957
Score = 167 (63.8 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 63/196 (32%), Positives = 92/196 (46%)
Query: 22 CPSRCQC----FDQKLEASCTDAGLE-VVPIQLNP-EVQTIILRENRISNVHYTLSFYIE 75
CP+ C C D L +C + +E + +Q P + + L EN I+ V T ++E
Sbjct: 374 CPTACTCNLQISDLGLNVNCQERKIESIAELQPKPYNPKKMYLTENYITVVRRT--DFLE 431
Query: 76 LRSLDL---SVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYN 132
LDL N+I+++ F L L ++ N I LS + F GL+ L+ L L YN
Sbjct: 432 ATGLDLLHLGNNRISMIQDRAFGDLGNLRRLYLNGNRIERLSPELFYGLQSLQYLFLQYN 491
Query: 133 KISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVP-NNVL 191
I I F +L+LL L+ NN S +FS L LR L L N +P + VL
Sbjct: 492 LIREIQAGTFDPVPNLQLLFLN-NNQLQAMPSGVFSGLTLLR-LNLRGNSFTSLPVSGVL 549
Query: 192 SNLPHQSLHYLYLNEN 207
L SL + L++N
Sbjct: 550 DQLT--SLIQIDLHDN 563
Score = 143 (55.4 bits), Expect = 3.6e-14, Sum P(2) = 3.6e-14
Identities = 59/204 (28%), Positives = 100/204 (49%)
Query: 21 ICPSRCQCFDQK--LEASCTDAGLEVVPIQLNPE---VQTIILRENRISNVHYTLSF--Y 73
IC + C C ++ L SC + G+ + +++P + ++L N +S + Y F Y
Sbjct: 47 ICDNACPCEEKDGILTVSCENRGI-ISLSEISPPRFPIYHLLLSGNLLSRL-YPNEFVNY 104
Query: 74 IELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNK 133
L L N I + + F L L+++ N++ L DTF GL+ L+ L + YN
Sbjct: 105 TGASILHLGSNVIQDIETGAFHGLRGLRRLHLNNNKLELLRDDTFLGLENLEYLQVDYNY 164
Query: 134 ISVINKTAFRDTLH-LELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLS 192
ISVI AF LH L++LIL+ N ++ ++ +F R + L + LD+ N L
Sbjct: 165 ISVIEPNAF-GKLHMLQVLILNDNLLSGLPNN-LF------RFVPLTH---LDLRGNRLK 213
Query: 193 NLPHQSLHYLYLNENLIETVLDNS 216
LP+ L L + ++E L+ +
Sbjct: 214 LLPYVGL--LQHMDKVVELQLEEN 235
Score = 141 (54.7 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 56/201 (27%), Positives = 90/201 (44%)
Query: 93 NFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLI 152
N + + LN+N +I ++++ K K + L+ N I+V+ +T F + L+LL
Sbjct: 381 NLQISDLGLNVNCQERKIESIAELQPKPYNP-KKMYLTENYITVVRRTDFLEATGLDLLH 439
Query: 153 LSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETV 212
L N I+ +D F L +LR L L+ N+I + + L QSL YL+L NLI +
Sbjct: 440 LGNNRISMIQD-RAFGDLGNLRRLYLNGNRIERLSPELFYGL--QSLQYLFLQYNLIREI 496
Query: 213 LDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQ-LSKLSA 271
+F + NL L L L TL ++P L +L++
Sbjct: 497 QAGTFD-PVPNLQLLFLNNNQLQAMPSGVFSGL-TLLRLNLRGNSFTSLPVSGVLDQLTS 554
Query: 272 LVNLDLSGNNFS-NIDSVAFK 291
L+ +DL N + D V K
Sbjct: 555 LIQIDLHDNPWDCTCDVVGMK 575
Score = 126 (49.4 bits), Expect = 3.6e-14, Sum P(2) = 3.6e-14
Identities = 44/125 (35%), Positives = 68/125 (54%)
Query: 336 LGTLKCDRLDLSGNNFSNIDSVAFKSLFSLK--LVKINLIPNLDS--IDQRAFVDNIQLE 391
LG L+ RL L+GN + F L SL+ ++ NLI + + D V N+QL
Sbjct: 456 LGNLR--RLYLNGNRIERLSPELFYGLQSLQYLFLQYNLIREIQAGTFDP---VPNLQL- 509
Query: 392 TVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFPLERISFL---DLSDNPL 448
+ +N N L+ +PS +F G T L+ ++L+GNS + L S L++++ L DL DNP
Sbjct: 510 -LFLNNNQ-LQAMPSGVFSGLTLLR-LNLRGNSFTSLPVSGV-LDQLTSLIQIDLHDNPW 565
Query: 449 HCDCN 453
C C+
Sbjct: 566 DCTCD 570
Score = 91 (37.1 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 40/156 (25%), Positives = 61/156 (39%)
Query: 151 LILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIE 210
L+LS N ++ +E F + IL L +N I D+ L + L L+LN N +E
Sbjct: 86 LLLSGNLLSRLYPNE-FVNYTGASILHLGSNVIQDIETGAFHGL--RGLRRLHLNNNKLE 142
Query: 211 TVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLS 270
+ D++F L NL L + L L +P L +
Sbjct: 143 LLRDDTF-LGLENLEYLQVDYNYISVIEPNAFGKLHMLQVLILNDNLLSGLPNN-LFRFV 200
Query: 271 ALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN 306
L +LDL GN + V K+V++ L N
Sbjct: 201 PLTHLDLRGNRLKLLPYVGLLQHMD-KVVELQLEEN 235
Score = 54 (24.1 bits), Expect = 9.6e-07, Sum P(2) = 9.6e-07
Identities = 19/80 (23%), Positives = 37/80 (46%)
Query: 369 KINLIPNLDSIDQRA-FVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSH 427
K+ L N ++ +R F++ L+ + + N + + + F NL+ + L GN +
Sbjct: 413 KMYLTENYITVVRRTDFLEATGLDLLHLGNN-RISMIQDRAFGDLGNLRRLYLNGNRIER 471
Query: 428 LEASHF-PLERISFLDLSDN 446
L F L+ + +L L N
Sbjct: 472 LSPELFYGLQSLQYLFLQYN 491
Score = 49 (22.3 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 30/143 (20%), Positives = 57/143 (39%)
Query: 261 IPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLK--LVKINLIPNLDSIDQXXXXXX 318
I + L L L L+GN + F L SL+ ++ NLI + +
Sbjct: 448 IQDRAFGDLGNLRRLYLNGNRIERLSPELFYGLQSLQYLFLQYNLIREIQAGTFDPVPNL 507
Query: 319 XXXXXXXXXXXAFSLTPLGTLKCDRLDLSGNNFSNID-SVAFKSLFSLKLVKINLIP--- 374
A L RL+L GN+F+++ S L SL + ++ P
Sbjct: 508 QLLFLNNNQLQAMPSGVFSGLTLLRLNLRGNSFTSLPVSGVLDQLTSLIQIDLHDNPWDC 567
Query: 375 NLDSIDQRAFVDNIQLETVIINE 397
D + + +++ +++ V+++E
Sbjct: 568 TCDVVGMKLWIEQLKVG-VLVDE 589
Score = 45 (20.9 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 24/108 (22%), Positives = 37/108 (34%)
Query: 195 PHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXX 254
P +++L L+ NL+ + N F T L L LR L
Sbjct: 79 PRFPIYHLLLSGNLLSRLYPNEF-VNYTGASILHLGSNVIQDIETGAFHGLRGLRRLHLN 137
Query: 255 XXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
+ L L L + N S I+ AF L L+++ +N
Sbjct: 138 NNKLELLRDDTFLGLENLEYLQVDYNYISVIEPNAFGKLHMLQVLILN 185
>MGI|MGI:2679449 [details] [associations]
symbol:Slitrk2 "SLIT and NTRK-like family, member 2"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0007409 "axonogenesis" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=ISS] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
MGI:MGI:2679449 GO:GO:0016021 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007409 InterPro:IPR000372
SMART:SM00013 HOGENOM:HOG000290667 HOVERGEN:HBG056407
GeneTree:ENSGT00680000099775 CTD:84631 eggNOG:NOG147171
EMBL:AB097571 EMBL:AK044761 IPI:IPI00329847 RefSeq:NP_001154903.1
RefSeq:NP_942563.2 UniGene:Mm.336081 UniGene:Mm.403134
ProteinModelPortal:Q810C0 SMR:Q810C0 STRING:Q810C0
PhosphoSite:Q810C0 PaxDb:Q810C0 PRIDE:Q810C0
Ensembl:ENSMUST00000036043 Ensembl:ENSMUST00000166241 GeneID:245450
KEGG:mmu:245450 InParanoid:Q810C0 OrthoDB:EOG4GTKC9 NextBio:386711
Bgee:Q810C0 CleanEx:MM_SLITRK2 Genevestigator:Q810C0
GermOnline:ENSMUSG00000036790 Uniprot:Q810C0
Length = 846
Score = 152 (58.6 bits), Expect = 4.0e-14, Sum P(3) = 4.0e-14
Identities = 56/199 (28%), Positives = 93/199 (46%)
Query: 16 KLNKAICPSRCQCFDQK--LEASCTDAGLEVVPIQLNPE--VQTIILRENRISNVHYTLS 71
K K IC RC C +++ L +C + G V + P+ + + L N ++ + Y
Sbjct: 23 KTAKDICKIRCLCEEKENVLNINCENKGFTTVSLLQPPQYRIYQLFLNGNLLTRL-YPNE 81
Query: 72 F--YIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDL 129
F Y +L L N + + F L L+++ N++ L +DTF GL+ L+ L
Sbjct: 82 FVNYSNAVTLHLGNNGLQEIRPGAFSGLKTLKRLHLNNNKLEVLREDTFLGLESLEYLQA 141
Query: 130 SYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVP-N 188
YN IS I AF L++LIL+ +N+ S +F + L L L N++ +P
Sbjct: 142 DYNYISTIEAGAFSKLNKLKVLILN-DNLLLSLPSNVFRFVL-LTHLDLRGNRLKVMPFA 199
Query: 189 NVLSNLPHQSLHYLYLNEN 207
VL ++ + + L EN
Sbjct: 200 GVLEHIG--GIMEIQLEEN 216
Score = 151 (58.2 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 58/190 (30%), Positives = 81/190 (42%)
Query: 15 TKLNKAI-CPSRCQCFDQK----LEASCTDAGL-EVVPIQLNP-EVQTIILRENRISNVH 67
TK A+ CPS C C Q L +C + + +Q P + + L N + V+
Sbjct: 333 TKSPVALTCPSSCVCTSQSSDNGLNVNCQERKFTNISDLQPKPTSPKKLYLTGNYLQTVY 392
Query: 68 YT-LSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKT 126
L Y L L L N+I V+ F L L ++ N + L F GL+ L+
Sbjct: 393 KNDLLEYSSLDLLHLGNNRIAVIQEGAFTNLTSLRRLYLNGNYLEVLYPSMFDGLQSLQY 452
Query: 127 LDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDV 186
L L YN I I F ++L+LL L+ N + D+ IF R L L NN +
Sbjct: 453 LYLEYNVIKEIKPLTFDALINLQLLFLNNNLLRSLPDN-IFGGTALTR-LNLRNNHFSHL 510
Query: 187 P-NNVLSNLP 195
P VL LP
Sbjct: 511 PVKGVLDQLP 520
Score = 118 (46.6 bits), Expect = 4.0e-14, Sum P(3) = 4.0e-14
Identities = 40/127 (31%), Positives = 68/127 (53%)
Query: 332 SLTPLGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKI--NLIPNLDSIDQRAFVDNIQ 389
+ T L +L+ RL L+GN + F L SL+ + + N+I + + A + N+Q
Sbjct: 419 AFTNLTSLR--RLYLNGNYLEVLYPSMFDGLQSLQYLYLEYNVIKEIKPLTFDALI-NLQ 475
Query: 390 LETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFPLERI-SFL--DLSDN 446
L + +N N+ L+ LP +F G T L ++L+ N SHL L+++ +F+ DL +N
Sbjct: 476 L--LFLNNNL-LRSLPDNIF-GGTALTRLNLRNNHFSHLPVKGV-LDQLPAFIQIDLQEN 530
Query: 447 PLHCDCN 453
P C C+
Sbjct: 531 PWDCTCD 537
Score = 108 (43.1 bits), Expect = 2.1e-09, Sum P(3) = 2.1e-09
Identities = 38/129 (29%), Positives = 59/129 (45%)
Query: 97 QNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFN 156
Q ++ L ++ N ++ L + F TL L N + I AF L+ L L+ N
Sbjct: 61 QYRIYQLFLNGNLLTRLYPNEFVNYSNAVTLHLGNNGLQEIRPGAFSGLKTLKRLHLNNN 120
Query: 157 NITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNS 216
+ + + F L+SL L+ D N I + S L L L LN+NL+ ++ N
Sbjct: 121 KLEVLRE-DTFLGLESLEYLQADYNYISTIEAGAFSKL--NKLKVLILNDNLLLSLPSNV 177
Query: 217 FPFTL-TNL 224
F F L T+L
Sbjct: 178 FRFVLLTHL 186
Score = 72 (30.4 bits), Expect = 8.2e-06, Sum P(3) = 8.2e-06
Identities = 35/160 (21%), Positives = 60/160 (37%)
Query: 150 LLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDV--PNNVLSNL-----PHQSLHYL 202
L +L+ I E + + +R L + +L++ N + + P ++ L
Sbjct: 8 LSVLTVAGILQTESRKTAKDICKIRCLCEEKENVLNINCENKGFTTVSLLQPPQYRIYQL 67
Query: 203 YLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIP 262
+LN NL+ + N F +N TL L L+TL +
Sbjct: 68 FLNGNLLTRLYPNEF-VNYSNAVTLHLGNNGLQEIRPGAFSGLKTLKRLHLNNNKLEVLR 126
Query: 263 TKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
L +L L N S I++ AF L LK++ +N
Sbjct: 127 EDTFLGLESLEYLQADYNYISTIEAGAFSKLNKLKVLILN 166
Score = 51 (23.0 bits), Expect = 2.4e-07, Sum P(3) = 2.4e-07
Identities = 26/98 (26%), Positives = 45/98 (45%)
Query: 351 FSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNLKQLPSKLF 409
F+NI + K S K K+ L N L ++ + ++ L+ + + N + + F
Sbjct: 365 FTNISDLQPKPT-SPK--KLYLTGNYLQTVYKNDLLEYSSLDLLHLGNN-RIAVIQEGAF 420
Query: 410 QGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDN 446
T+L+ + L GN L L S F L+ + +L L N
Sbjct: 421 TNLTSLRRLYLNGNYLEVLYPSMFDGLQSLQYLYLEYN 458
Score = 40 (19.1 bits), Expect = 4.0e-14, Sum P(3) = 4.0e-14
Identities = 8/32 (25%), Positives = 16/32 (50%)
Query: 507 IVLNNLKCSSPPDIKGLEVKAVPENSVHCESN 538
+++N + C SP G +K + ++ C N
Sbjct: 552 VIINEVTCESPAKHAGEILKFLGREAI-CPEN 582
>UNIPROTKB|F1SRC2 [details] [associations]
symbol:CHADL "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031012 "extracellular matrix" evidence=IDA]
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
SMART:SM00013 OMA:ICDNSRR GeneTree:ENSGT00700000104286
EMBL:CU407312 Ensembl:ENSSSCT00000000073 Uniprot:F1SRC2
Length = 757
Score = 153 (58.9 bits), Expect = 4.1e-14, Sum P(3) = 4.1e-14
Identities = 66/262 (25%), Positives = 106/262 (40%)
Query: 22 CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEV-QTIILRENRISNVHYTLSFYI--ELRS 78
CP C C + + +C L VP + PE+ Q + LR N + V +F L
Sbjct: 30 CPQTCICDNSRRHVACRHQNLTEVPNAI-PELTQRLDLRGN-VLRVIPPAAFQDLPYLTH 87
Query: 79 LDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVIN 138
LDL ++ ++ F +LL LN++ N +SAL ++ GL L+ L+L N + +
Sbjct: 88 LDLRHCQVELVAEGAFRGLGRLLLLNLASNRLSALPQEALDGLGSLRRLELEGNLLEELR 147
Query: 139 KTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQS 198
F L L L+ N + Y F L R L+L +N + + L+ LP +
Sbjct: 148 PGTFGALGALATLNLAHNALVYLPPMA-FQGLVRARWLQLSHNALSVLAPEALAGLP--A 204
Query: 199 LHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXX 258
L L L+ N ++++ + L L L + L L
Sbjct: 205 LRRLSLHHNELQSLPGLALS-QARGLARLELGHNPFTYAGEEDGLALPGLRELRLEHGAL 263
Query: 259 XAIPTKQLSKLSALVNLDLSGN 280
A+ + + L LDL GN
Sbjct: 264 QALDPRAFAHCPRLHTLDLRGN 285
Score = 123 (48.4 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 63/260 (24%), Positives = 101/260 (38%)
Query: 96 YQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSF 155
+ N L++ N + + F+GL L +L L + I+ + A L L LS
Sbjct: 416 FPNDTQLLDLRRNHFPLVPRAAFQGLGRLVSLHLQHCGITELEAGALAGLGSLIYLYLSD 475
Query: 156 NNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDN 215
N ++ + + + + L L L+ N+ L VP L LP SL L+L +N ++ +
Sbjct: 476 NGLSGLSATALEGAPR-LGYLYLERNRFLQVPGAALGALP--SLFSLHLQDNAVDRLAPG 532
Query: 216 SFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNL 275
L L L + L +PT+ L L AL+ L
Sbjct: 533 DLAGGRA-LRWLYLSGNRLTQVSPGALGPAQELEKLHLDRNQLPEVPTEALEGLPALLEL 591
Query: 276 DLSGNNFSNIDSVAFKSLF-SLKLVKINLIPNLDSIDQXXXXXXX--XXXXXXXXXXAFS 332
LSGN + AF+ + SL+ + +N L+ I +
Sbjct: 592 QLSGNPLRALQEGAFRPVGRSLQHLFLNS-SGLEQISPGAFSGLGPQLQSLYLQKNQLQA 650
Query: 333 LTPL-GTLKCDRLDLSGNNF 351
L PL G + + +DLSGN F
Sbjct: 651 LPPLPGLRQLELIDLSGNPF 670
Score = 112 (44.5 bits), Expect = 4.1e-14, Sum P(3) = 4.1e-14
Identities = 50/185 (27%), Positives = 79/185 (42%)
Query: 275 LDLSGNNFSNIDSVAF---KSLFSLKLVKINLIPNLDSIDQXXXXXXXXXXXXXXXXXAF 331
L L N F + A SLFSL L + N + L D
Sbjct: 495 LYLERNRFLQVPGAALGALPSLFSLHL-QDNAVDRLAPGDLAGGRALRWLYLSGNRLTQV 553
Query: 332 SLTPLGTLK-CDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFVD-NIQ 389
S LG + ++L L N + + A + L +L ++++ P L ++ + AF
Sbjct: 554 SPGALGPAQELEKLHLDRNQLPEVPTEALEGLPALLELQLSGNP-LRALQEGAFRPVGRS 612
Query: 390 LETVIINENMNLKQLPSKLFQG-NTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNP 447
L+ + +N + L+Q+ F G L+S+ L+ N L L P L ++ +DLS NP
Sbjct: 613 LQHLFLNSS-GLEQISPGAFSGLGPQLQSLYLQKNQLQALPP--LPGLRQLELIDLSGNP 669
Query: 448 LHCDC 452
HCDC
Sbjct: 670 FHCDC 674
Score = 58 (25.5 bits), Expect = 0.00029, Sum P(3) = 0.00029
Identities = 21/88 (23%), Positives = 35/88 (39%)
Query: 51 PEVQTIILRENRISNVH-YTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNE 109
P ++ + L N + ++ LS L L+L N G + L L + +
Sbjct: 203 PALRRLSLHHNELQSLPGLALSQARGLARLELGHNPFTYAGEEDGLALPGLRELRLEHGA 262
Query: 110 ISALSKDTFKGLKELKTLDLSYNKISVI 137
+ AL F L TLDL N++ +
Sbjct: 263 LQALDPRAFAHCPRLHTLDLRGNQLDAL 290
Score = 57 (25.1 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 22/68 (32%), Positives = 34/68 (50%)
Query: 382 RAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISF 440
R F ++ QL + + N + +P FQG L S+ L+ ++ LEA L + +
Sbjct: 414 RGFPNDTQL--LDLRRN-HFPLVPRAAFQGLGRLVSLHLQHCGITELEAGALAGLGSLIY 470
Query: 441 LDLSDNPL 448
L LSDN L
Sbjct: 471 LYLSDNGL 478
Score = 50 (22.7 bits), Expect = 7.6e-08, Sum P(3) = 7.6e-08
Identities = 59/270 (21%), Positives = 94/270 (34%)
Query: 275 LDLSGNNFSNIDSVAFKSLFSLKLVKINL----IPNLDSIDQXXXXXXXXXXXXXXXXXA 330
LDL N+F + AF+ L +LV ++L I L++
Sbjct: 423 LDLRRNHFPLVPRAAFQGLG--RLVSLHLQHCGITELEAGALAGLGSLIYLYLSDNGLSG 480
Query: 331 FSLTPL-GTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNI 388
S T L G + L L N F + A +L SL ++L N +D +
Sbjct: 481 LSATALEGAPRLGYLYLERNRFLQVPGAALGALPSL--FSLHLQDNAVDRLAPGDLAGGR 538
Query: 389 QLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNP 447
L + ++ N + P L L+ + L N L + L + L LS NP
Sbjct: 539 ALRWLYLSGNRLTQVSPGALGPAQ-ELEKLHLDRNQLPEVPTEALEGLPALLELQLSGNP 597
Query: 448 LHCDCNXXXXXXXXXXXXKSTMETTTVAYEMTSNTSISPGTTTEAQRVDRIIKNNHSLTI 507
L +S + + ISPG + + SL +
Sbjct: 598 LRA-----LQEGAFRPVGRSLQH---LFLNSSGLEQISPGAFSG------LGPQLQSLYL 643
Query: 508 VLNNLKCSSP-PDIKGLEVKAVPENSVHCE 536
N L+ P P ++ LE+ + N HC+
Sbjct: 644 QKNQLQALPPLPGLRQLELIDLSGNPFHCD 673
Score = 43 (20.2 bits), Expect = 4.1e-14, Sum P(3) = 4.1e-14
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 514 CSSPPDIKGLEVKA 527
C++PP +G VKA
Sbjct: 694 CATPPSARGQRVKA 707
>MGI|MGI:1341817 [details] [associations]
symbol:Lgr5 "leucine rich repeat containing G protein
coupled receptor 5" species:10090 "Mus musculus" [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0004930 "G-protein
coupled receptor activity" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016500
"protein-hormone receptor activity" evidence=IEA] [GO:0048839
"inner ear development" evidence=IDA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS00237 PROSITE:PS50262 PROSITE:PS51450 MGI:MGI:1341817
GO:GO:0016021 GO:GO:0005886 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0048839 GO:GO:0016500 EMBL:CH466539
GeneTree:ENSGT00650000092962 HOVERGEN:HBG031675
HOGENOM:HOG000231829 CTD:8549 KO:K04308 OMA:FNPHFKE
OrthoDB:EOG46143B EMBL:AF110818 EMBL:AK132387 IPI:IPI00130319
PIR:JG0193 RefSeq:NP_034325.2 UniGene:Mm.42103
ProteinModelPortal:Q9Z1P4 SMR:Q9Z1P4 STRING:Q9Z1P4
PhosphoSite:Q9Z1P4 PRIDE:Q9Z1P4 DNASU:14160
Ensembl:ENSMUST00000020350 GeneID:14160 KEGG:mmu:14160
UCSC:uc007hbi.1 InParanoid:Q3V1L2 NextBio:285290 Bgee:Q9Z1P4
Genevestigator:Q9Z1P4 GermOnline:ENSMUSG00000020140 Uniprot:Q9Z1P4
Length = 907
Score = 216 (81.1 bits), Expect = 4.4e-14, P = 4.4e-14
Identities = 101/377 (26%), Positives = 156/377 (41%)
Query: 79 LDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVIN 138
LDLS+N I+ L + L L ++ N ++ + K F GL LK L L N++ +
Sbjct: 71 LDLSMNNISQLPASLLHRLCFLEELRLAGNALTHIPKGAFTGLHSLKVLMLQNNQLRQVP 130
Query: 139 KTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQS 198
+ A ++ L+ L L N+I+Y S FS L SLR L LD+N + DVP +L +
Sbjct: 131 EEALQNLRSLQSLRLDANHISYVPPS-CFSGLHSLRHLWLDDNALTDVPVQAFRSL--SA 187
Query: 199 LHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXX 258
L + L N I + D +F L++L L L L +L
Sbjct: 188 LQAMTLALNKIHHIADYAFG-NLSSLVVLHLHNNRIHSLGKKCFDGLHSLETLDLNYNNL 246
Query: 259 XAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQXXXXXX 318
PT + LS L L NN +I AF + L+ I+ N
Sbjct: 247 DEFPTA-IKTLSNLKELGFHSNNIRSIPERAFVG--NPSLITIHFYDNPIQFVGVSAFQH 303
Query: 319 XXXXXXXXXXXAFSLTPL----GTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKI--NL 372
A +T GT + L L+G S++ L +L+++ + NL
Sbjct: 304 LPELRTLTLNGASHITEFPHLTGTATLESLTLTGAKISSLPQAVCDQLPNLQVLDLSYNL 363
Query: 373 IPNLDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASH 432
+ +L S+ + I L NE +K FQ NL+S++L N ++ + +
Sbjct: 364 LEDLPSLSGCQKLQKIDLRH---NEIYEIK---GSTFQQLFNLRSLNLAWNKIAIIHPNA 417
Query: 433 FP-LERISFLDLSDNPL 448
F L + LDLS N L
Sbjct: 418 FSTLPSLIKLDLSSNLL 434
Score = 180 (68.4 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 103/426 (24%), Positives = 172/426 (40%)
Query: 22 CPSRCQC-FDQK--LEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSFYI-ELR 77
CPS C C D + L C+D GL +P L+ + L N IS + +L + L
Sbjct: 34 CPSHCHCELDGRMLLRVDCSDLGLSELPSNLSVFTSYLDLSMNNISQLPASLLHRLCFLE 93
Query: 78 SLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVI 137
L L+ N + + F + L L + N++ + ++ + L+ L++L L N IS +
Sbjct: 94 ELRLAGNALTHIPKGAFTGLHSLKVLMLQNNQLRQVPEEALQNLRSLQSLRLDANHISYV 153
Query: 138 NKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQ 197
+ F L L L N +T + F SL +L+ + L N+I + + NL
Sbjct: 154 PPSCFSGLHSLRHLWLDDNALTDVP-VQAFRSLSALQAMTLALNKIHHIADYAFGNL--S 210
Query: 198 SLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXX 257
SL L+L+ N I ++ F L +L TL L TL L
Sbjct: 211 SLVVLHLHNNRIHSLGKKCFD-GLHSLETLDLNYNNLDEFPTAIK-TLSNLKELGFHSNN 268
Query: 258 XXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQXXXXX 317
+IP + +L+ + N + AF+ L L+ + +N I +
Sbjct: 269 IRSIPERAFVGNPSLITIHFYDNPIQFVGVSAFQHLPELRTLTLN---GASHITEFPHLT 325
Query: 318 XXXXXXXXXXXXAFSLTPLGTLKCDRL------DLSGNNFSNIDSVA-FKSLFSLKLVKI 370
A ++ L CD+L DLS N ++ S++ + L + L
Sbjct: 326 GTATLESLTLTGA-KISSLPQAVCDQLPNLQVLDLSYNLLEDLPSLSGCQKLQKIDLRHN 384
Query: 371 NLIPNLDSIDQRAF-VDNIQL---ETVIINENMNLKQLPS--KLFQGNTNLKSVSLKG-N 423
+ S Q+ F + ++ L + II+ N LPS KL + L S + G +
Sbjct: 385 EIYEIKGSTFQQLFNLRSLNLAWNKIAIIHPNA-FSTLPSLIKLDLSSNLLSSFPVTGLH 443
Query: 424 SLSHLE 429
L+HL+
Sbjct: 444 GLTHLK 449
Score = 168 (64.2 bits), Expect = 7.5e-09, P = 7.5e-09
Identities = 108/428 (25%), Positives = 164/428 (38%)
Query: 23 PSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISN---VHYTLSFYIELRSL 79
PS F L+ S + + +P L + L E R++ H + L SL
Sbjct: 61 PSNLSVFTSYLDLSMNN--ISQLPASLLHRL--CFLEELRLAGNALTHIPKGAFTGLHSL 116
Query: 80 D---LSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISV 136
L N++ + + L +L + N IS + F GL L+ L L N ++
Sbjct: 117 KVLMLQNNQLRQVPEEALQNLRSLQSLRLDANHISYVPPSCFSGLHSLRHLWLDDNALTD 176
Query: 137 INKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPH 196
+ AFR L+ + L+ N I + D F +L SL +L L NN+I + L H
Sbjct: 177 VPVQAFRSLSALQAMTLALNKIHHIADYA-FGNLSSLVVLHLHNNRIHSLGKKCFDGL-H 234
Query: 197 QSLHYLYLNENLIETVLDNSFPF---TLTNLHTLALXXXXXXXXXXXXXV---TLRTLHX 250
SL L LN N ++ FP TL+NL L V +L T+H
Sbjct: 235 -SLETLDLNYNNLD-----EFPTAIKTLSNLKELGFHSNNIRSIPERAFVGNPSLITIHF 288
Query: 251 XXXXXXXXXAIPTKQLSKLSALVNLDLSG-NNFSNIDSVAFKSLFSLKLVKINLIPNLDS 309
+ L +L L S F ++ A +L KI+ +P
Sbjct: 289 YDNPIQFVGVSAFQHLPELRTLTLNGASHITEFPHLTGTATLESLTLTGAKISSLPQA-V 347
Query: 310 IDQXXXXXXXXXXXXXXXXXAFSLTPLGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVK 369
DQ SL+ G K ++DL N I F+ LF+L+
Sbjct: 348 CDQLPNLQVLDLSYNLLEDLP-SLS--GCQKLQKIDLRHNEIYEIKGSTFQQLFNLR--S 402
Query: 370 INLIPN-LDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSL--S 426
+NL N + I AF L + ++ N+ L P G T+LK L GN S
Sbjct: 403 LNLAWNKIAIIHPNAFSTLPSLIKLDLSSNL-LSSFPVTGLHGLTHLK---LTGNRALQS 458
Query: 427 HLEASHFP 434
+ +++FP
Sbjct: 459 LIPSANFP 466
>UNIPROTKB|F1MMM6 [details] [associations]
symbol:SLIT3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070100 "negative regulation of chemokine-mediated
signaling pathway" evidence=IEA] [GO:0061364 "apoptotic process
involved in luteolysis" evidence=IEA] [GO:0051414 "response to
cortisol stimulus" evidence=IEA] [GO:0050919 "negative chemotaxis"
evidence=IEA] [GO:0048846 "axon extension involved in axon
guidance" evidence=IEA] [GO:0048495 "Roundabout binding"
evidence=IEA] [GO:0035385 "Roundabout signaling pathway"
evidence=IEA] [GO:0032870 "cellular response to hormone stimulus"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0010629 "negative regulation of gene expression"
evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0008285
GO:GO:0005615 GO:GO:0030308 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887 PROSITE:PS01186
GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 GO:GO:0048846 GO:GO:0070100 Pfam:PF12661
GO:GO:0051414 GeneTree:ENSGT00700000104083 GO:GO:0050919
GO:GO:0035385 GO:GO:0061364 OMA:SVDCHGL EMBL:DAAA02049822
EMBL:DAAA02049823 EMBL:DAAA02049824 EMBL:DAAA02049825
EMBL:DAAA02049826 EMBL:DAAA02049827 IPI:IPI01017433
Ensembl:ENSBTAT00000049620 Uniprot:F1MMM6
Length = 1339
Score = 178 (67.7 bits), Expect = 6.3e-09, Sum P(2) = 6.3e-09
Identities = 41/132 (31%), Positives = 68/132 (51%)
Query: 22 CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSFYIELRSLDL 81
CP +C C + + C++ GL +P + +V + L N ++ V LS + L +DL
Sbjct: 539 CPEQCTCVETVVR--CSNRGLRALPKGIPKDVTELYLEGNHLTAVPKELSSFRHLTLIDL 596
Query: 82 SVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTA 141
S N I +L ++ F + L L +SYN + + +F GL+ L+ L L N IS + + +
Sbjct: 597 SNNSIGMLTNYTFSNMSHLSTLILSYNRLRCIPVHSFNGLRSLRVLTLHGNDISSVPEGS 656
Query: 142 FRDTLHLELLIL 153
F D L L+L
Sbjct: 657 FNDLTSLSHLLL 668
Score = 177 (67.4 bits), Expect = 4.4e-14, Sum P(3) = 4.4e-14
Identities = 48/165 (29%), Positives = 82/165 (49%)
Query: 18 NKAICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHY-TLSFYIEL 76
N CPS C C + ++ C GL +P L + I L +N I ++ + Y +L
Sbjct: 90 NSISCPSACTCSNNIVD--CRGKGLTEIPANLPEGIVEIRLEQNSIKSIPAGAFTQYKKL 147
Query: 77 RSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISV 136
+ +D+S N+I+ + F+ L +L + N+I+ + K F GL L+ L L+ NKI+
Sbjct: 148 KRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLNANKINC 207
Query: 137 INKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNN 181
+ F+D L LL L N + +F+ L++++ L L N
Sbjct: 208 LRVNTFQDLQSLSLLSLYDNKLQTISKG-LFAPLQAIQTLHLAQN 251
Score = 162 (62.1 bits), Expect = 1.9e-12, Sum P(3) = 1.9e-12
Identities = 45/134 (33%), Positives = 74/134 (55%)
Query: 74 IELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNK 133
+E+R L N I + + F KL ++IS N+IS ++ D F+GLK L +L L NK
Sbjct: 124 VEIR---LEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNK 180
Query: 134 ISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSN 193
I+ I K F + L+LL+L+ N I + F L+SL +L L +N++ + + +
Sbjct: 181 ITEIPKGLFDGLVSLQLLLLNANKINCLRVNT-FQDLQSLSLLSLYDNKLQTISKGLFA- 238
Query: 194 LPHQSLHYLYLNEN 207
P Q++ L+L +N
Sbjct: 239 -PLQAIQTLHLAQN 251
Score = 156 (60.0 bits), Expect = 4.4e-10, Sum P(3) = 4.4e-10
Identities = 49/163 (30%), Positives = 76/163 (46%)
Query: 21 ICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSF--YIELRS 78
+CP RC+C + C++ L +P L V + L +N IS + T F LR
Sbjct: 318 VCPDRCRC--EGTIVDCSNQKLARIPSHLPEYVTDLRLNDNEISVLEATGIFKKLPNLRK 375
Query: 79 LDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVIN 138
++LS N+I + F+ + L ++ N++ F+GL LKTL L N IS ++
Sbjct: 376 INLSNNRIKEVKEGAFDGAASVQELVLTGNQLETAHGRAFRGLSGLKTLMLRSNLISCVS 435
Query: 139 KTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNN 181
F + LL L N IT F++L SL + L +N
Sbjct: 436 NDTFAGLSSVRLLSLYDNRITTITPGA-FTTLVSLSTINLLSN 477
Score = 141 (54.7 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 37/108 (34%), Positives = 55/108 (50%)
Query: 103 LNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFE 162
L + N ++A+ K+ + L +DLS N I ++ F + HL LILS+N +
Sbjct: 571 LYLEGNHLTAVPKE-LSSFRHLTLIDLSNNSIGMLTNYTFSNMSHLSTLILSYNRLRCIP 629
Query: 163 DSEIFSSLKSLRILKLDNNQILDVPN---NVLSNLPHQSLHYLYLNEN 207
F+ L+SLR+L L N I VP N L++L H LH +N N
Sbjct: 630 VHS-FNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLLLHTFPMNYN 676
Score = 96 (38.9 bits), Expect = 4.4e-14, Sum P(3) = 4.4e-14
Identities = 28/113 (24%), Positives = 60/113 (53%)
Query: 343 RLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNL 401
+++LS N + AF S++ ++ L N L++ RAF L+T+++ N+ +
Sbjct: 375 KINLSNNRIKEVKEGAFDGAASVQ--ELVLTGNQLETAHGRAFRGLSGLKTLMLRSNL-I 431
Query: 402 KQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPLHCDCN 453
+ + F G ++++ +SL N ++ + F L +S ++L NP +C+C+
Sbjct: 432 SCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNCH 484
Score = 89 (36.4 bits), Expect = 2.3e-13, Sum P(3) = 2.3e-13
Identities = 30/106 (28%), Positives = 54/106 (50%)
Query: 344 LDLSGNNFSNIDSVA-FKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNL 401
L L+ N S +++ FK L +L+ KINL N + + + AF ++ +++ N L
Sbjct: 351 LRLNDNEISVLEATGIFKKLPNLR--KINLSNNRIKEVKEGAFDGAASVQELVLTGNQ-L 407
Query: 402 KQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDN 446
+ + F+G + LK++ L+ N +S + F L + L L DN
Sbjct: 408 ETAHGRAFRGLSGLKTLMLRSNLISCVSNDTFAGLSSVRLLSLYDN 453
Score = 79 (32.9 bits), Expect = 1.5e-12, Sum P(4) = 1.5e-12
Identities = 35/119 (29%), Positives = 57/119 (47%)
Query: 335 PLGTLK-CDRLDLSGNNFSNIDSVAFKSLFSLK-LVKINLIPN-LDSIDQRAFVDNIQLE 391
P G K L L GN+ + + K L S + L I+L N + + F + L
Sbjct: 561 PKGIPKDVTELYLEGNHLTAVP----KELSSFRHLTLIDLSNNSIGMLTNYTFSNMSHLS 616
Query: 392 TVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHL-EASHFPLERISFLDLSDNPLH 449
T+I++ N L+ +P F G +L+ ++L GN +S + E S L +S L L P++
Sbjct: 617 TLILSYN-RLRCIPVHSFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLLLHTFPMN 674
Score = 59 (25.8 bits), Expect = 1.5e-10, Sum P(4) = 1.5e-10
Identities = 17/59 (28%), Positives = 30/59 (50%)
Query: 390 LETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFPLERISFLDLSDNPL 448
+ETV+ N L+ LP + + T L L+GN L+ + ++ +DLS+N +
Sbjct: 546 VETVVRCSNRGLRALPKGIPKDVTELY---LEGNHLTAVPKELSSFRHLTLIDLSNNSI 601
Score = 57 (25.1 bits), Expect = 4.0e-10, Sum P(3) = 4.0e-10
Identities = 16/50 (32%), Positives = 26/50 (52%)
Query: 261 IPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIP-NLDS 309
IP + L +L L L GN+ S++ +F L SL + ++ P N +S
Sbjct: 628 IPVHSFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLLLHTFPMNYNS 677
Score = 51 (23.0 bits), Expect = 9.6e-10, Sum P(2) = 9.6e-10
Identities = 33/156 (21%), Positives = 55/156 (35%)
Query: 395 IN-ENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPLHCDC 452
IN N +K++ F G +++ + L GN L F L + L L N + C
Sbjct: 376 INLSNNRIKEVKEGAFDGAASVQELVLTGNQLETAHGRAFRGLSGLKTLMLRSNLISCVS 435
Query: 453 NXXXXXXXXXXXX-----KSTMET----TTVAYEMTSNTSISP-GTTTEAQRVDRIIKNN 502
N + T T TT+ T N +P + + ++
Sbjct: 436 NDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNCHLAWLGKWLRKR 495
Query: 503 HSLTIVLNNLKCSSPPDIKGLEVKAVPENSVHCESN 538
IV N +C P +K + ++ V C+ N
Sbjct: 496 R---IVSGNPRCQKPFFLKEIPIQDVAIQDFTCDGN 528
Score = 51 (23.0 bits), Expect = 1.6e-09, Sum P(3) = 1.6e-09
Identities = 21/89 (23%), Positives = 40/89 (44%)
Query: 337 GTLKCDRLDLSGNNFSNIDSVAFKSLFSLK--LVKINLIPNLDSIDQRAFVDNIQLETVI 394
G L L+GN AF+ L LK +++ NLI + + D A + +++L ++
Sbjct: 393 GAASVQELVLTGNQLETAHGRAFRGLSGLKTLMLRSNLISCVSN-DTFAGLSSVRLLSLY 451
Query: 395 INENMNLKQLPSKLFQGNTNLKSVSLKGN 423
N + + F +L +++L N
Sbjct: 452 DNR---ITTITPGAFTTLVSLSTINLLSN 477
Score = 50 (22.7 bits), Expect = 2.0e-09, Sum P(3) = 2.0e-09
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 260 AIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSL 296
A+P K+LS L +DLS N+ + + F ++ L
Sbjct: 580 AVP-KELSSFRHLTLIDLSNNSIGMLTNYTFSNMSHL 615
Score = 43 (20.2 bits), Expect = 1.5e-12, Sum P(4) = 1.5e-12
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 270 SALVNLDLSGNNFSNIDSVAFKSLFSLK--LVKINLI 304
+++ L L+GN AF+ L LK +++ NLI
Sbjct: 395 ASVQELVLTGNQLETAHGRAFRGLSGLKTLMLRSNLI 431
Score = 43 (20.2 bits), Expect = 1.5e-12, Sum P(4) = 1.5e-12
Identities = 32/131 (24%), Positives = 52/131 (39%)
Query: 183 ILDVPNNVLSNLPHQSLHY---LYLNENLIETVLDNSFPFT-LTNLHTLALXXXXXXXXX 238
I+D N L+ +P Y L LN+N I +VL+ + F L NL + L
Sbjct: 329 IVDCSNQKLARIPSHLPEYVTDLRLNDNEI-SVLEATGIFKKLPNLRKINLSNNRIKEVK 387
Query: 239 XXX---XVTLRTLHXXXXXXXXXXAIPTKQLSKLSALV---NLD--LSGNNFSNIDSVAF 290
+++ L + LS L L+ NL +S + F+ + SV
Sbjct: 388 EGAFDGAASVQELVLTGNQLETAHGRAFRGLSGLKTLMLRSNLISCVSNDTFAGLSSVRL 447
Query: 291 KSLFSLKLVKI 301
SL+ ++ I
Sbjct: 448 LSLYDNRITTI 458
Score = 42 (19.8 bits), Expect = 4.4e-14, Sum P(3) = 4.4e-14
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 496 DRIIKNNHSLTIVLNNLKCSSPPDIKG 522
D +NN + +NN C PP+ G
Sbjct: 820 DNDCENNATCVDGVNNYVCVCPPNYTG 846
>RGD|628615 [details] [associations]
symbol:Lgr4 "leucine-rich repeat-containing G protein-coupled
receptor 4" species:10116 "Rattus norvegicus" [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016500 "protein-hormone receptor activity"
evidence=IEA] [GO:0030539 "male genitalia development"
evidence=IEA;ISO] [GO:0035239 "tube morphogenesis" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA;ISO] [GO:0050673
"epithelial cell proliferation" evidence=IEA;ISO] [GO:0061290
"canonical Wnt receptor signaling pathway involved in metanephric
kidney development" evidence=IEA;ISO] [GO:0072202 "cell
differentiation involved in metanephros development"
evidence=IEA;ISO] [GO:0072224 "metanephric glomerulus development"
evidence=IEA;ISO] [GO:0072282 "metanephric nephron tubule
morphogenesis" evidence=IEA;ISO] [GO:0090190 "positive regulation
of branching involved in ureteric bud morphogenesis"
evidence=IEA;ISO] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000276 InterPro:IPR002131 InterPro:IPR017452
Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373 PROSITE:PS00237
PROSITE:PS50262 PROSITE:PS51450 EMBL:AF061443 RGD:628615
GO:GO:0016021 GO:GO:0005886 GO:GO:0045892 GO:GO:0045893
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0030539
GO:GO:0090190 GO:GO:0050673 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0016500 GO:GO:0061290 GO:GO:0072282 CTD:55366
HOVERGEN:HBG031675 KO:K04309 OrthoDB:EOG476JZH GO:GO:0072202
GO:GO:0072224 HOGENOM:HOG000231829 IPI:IPI00339207
RefSeq:NP_775450.1 UniGene:Rn.162671 ProteinModelPortal:Q9Z2H4
PhosphoSite:Q9Z2H4 GeneID:286994 KEGG:rno:286994 UCSC:RGD:628615
InParanoid:Q9Z2H4 NextBio:625274 ArrayExpress:Q9Z2H4
Genevestigator:Q9Z2H4 GermOnline:ENSRNOG00000005715 Uniprot:Q9Z2H4
Length = 951
Score = 216 (81.1 bits), Expect = 4.7e-14, P = 4.7e-14
Identities = 109/383 (28%), Positives = 164/383 (42%)
Query: 77 RSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISV 136
++LD+S+N I L F+ L L ++ N++S + GLKELK L L N++
Sbjct: 60 QALDISMNNITQLPEDAFKSFPFLEELQLAGNDLSLIHPKALSGLKELKVLTLQNNQLRT 119
Query: 137 INKTAFRDTLHLELLILSFNNITYF-EDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLP 195
+ A L+ L L N+IT EDS F L LR L LD+N + +VP LSNLP
Sbjct: 120 VPSEAIHGLSALQSLRLDANHITSVPEDS--FEGLVQLRHLWLDDNSLTEVPVRPLSNLP 177
Query: 196 HQSLHYLYLNENLIETVLDNSFPFT-LTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXX 254
+L L L N I ++ D F FT L++L L L L L
Sbjct: 178 --TLQALTLALNNISSIPD--FAFTNLSSLVVLHLHNNKIKSLSQHCFDGLDNLETLDLN 233
Query: 255 XXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQXX 314
P + + L +L L N+ S I AF L+ + + P L +
Sbjct: 234 YNYLDEFP-QAIKALPSLKELGFHSNSISVIPDGAFGGNPLLRTIHLYDNP-LSFVGNSA 291
Query: 315 XXXXXXXXXXXXXXXAF-----SLTPLGTLKCDRLDLSGNNFSNI-DSVAF--KSLFSLK 366
+ +LT GT+ + L L+G S+I D + K L +L
Sbjct: 292 FHNLSDLHCLVIRGASLVQWFPNLT--GTVHLESLTLTGTKISSIPDDLCQNQKMLRTLD 349
Query: 367 LVKINLIPNLDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLS 426
L N I +L S + ++ I L+ N+ +K+ FQG T+L+ + L N +
Sbjct: 350 L-SYNNIRDLPSFNGCRALEEISLQR---NQISLIKE---NTFQGLTSLRILDLSRNLIR 402
Query: 427 HLEASHFP-LERISFLDLSDNPL 448
+ + F L I+ LD+S N L
Sbjct: 403 EIHSGAFAKLGTITNLDVSFNEL 425
Score = 194 (73.4 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 103/409 (25%), Positives = 169/409 (41%)
Query: 23 PSRCQCFDQKLEASCTD-AGLEVVPIQLNPEVQTIILRENRISNVH-YTLSFYIELRSLD 80
P F Q L+ S + L + P ++ + L N +S +H LS EL+ L
Sbjct: 52 PEGLSAFTQALDISMNNITQLPEDAFKSFPFLEELQLAGNDLSLIHPKALSGLKELKVLT 111
Query: 81 LSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKT 140
L N++ + S + L +L + N I+++ +D+F+GL +L+ L L N ++ +
Sbjct: 112 LQNNQLRTVPSEAIHGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSLTEVPVR 171
Query: 141 AFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNV---LSNLPHQ 197
+ L+ L L+ NNI+ D F++L SL +L L NN+I + + L NL
Sbjct: 172 PLSNLPTLQALTLALNNISSIPDFA-FTNLSSLVVLHLHNNKIKSLSQHCFDGLDNLETL 230
Query: 198 SLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXX 257
L+Y YL+E + + + P +L L + LRT+H
Sbjct: 231 DLNYNYLDE-FPQAI--KALP-SLKELGFHSNSISVIPDGAFGGNPLLRTIHLYDNPLSF 286
Query: 258 XXAIPTKQLSKLSALVNLDLSGNN-FSNIDSVAFKSLFSLKLVKINLIPNLDSIDQXXXX 316
LS L LV S F N+ +L KI+ IP+ +Q
Sbjct: 287 VGNSAFHNLSDLHCLVIRGASLVQWFPNLTGTVHLESLTLTGTKISSIPDDLCQNQKMLR 346
Query: 317 XXXXXXXXXXXXXAFSLTPLGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKI--NLIP 374
+F+ G + + L N S I F+ L SL+++ + NLI
Sbjct: 347 TLDLSYNNIRDLPSFN----GCRALEEISLQRNQISLIKENTFQGLTSLRILDLSRNLIR 402
Query: 375 NLDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGN 423
+ S AF +L T I N +++ +L S +G L + L GN
Sbjct: 403 EIHS---GAFA---KLGT-ITNLDVSFNELTSFPTEGLNGLNQLKLVGN 444
Score = 183 (69.5 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 99/431 (22%), Positives = 176/431 (40%)
Query: 21 ICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNV-HYTLSFYIELRSL 79
+C + C C D C+ GL VP L+ Q + + N I+ + + L L
Sbjct: 28 LCAAPCSC-DGDRRVDCSGKGLTAVPEGLSAFTQALDISMNNITQLPEDAFKSFPFLEEL 86
Query: 80 DLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINK 139
L+ N ++++ +L L + N++ + + GL L++L L N I+ + +
Sbjct: 87 QLAGNDLSLIHPKALSGLKELKVLTLQNNQLRTVPSEAIHGLSALQSLRLDANHITSVPE 146
Query: 140 TAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSL 199
+F + L L L N++T + S+L +L+ L L N I +P+ +NL SL
Sbjct: 147 DSFEGLVQLRHLWLDDNSLTEVPVRPL-SNLPTLQALTLALNNISSIPDFAFTNL--SSL 203
Query: 200 HYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXX 259
L+L+ N I+++ + F L NL TL L L +L
Sbjct: 204 VVLHLHNNKIKSLSQHCFD-GLDNLETLDLNYNYLDEFPQAIKA-LPSLKELGFHSNSIS 261
Query: 260 AIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKI---NLI---PNLD-SIDQ 312
IP L + L N S + + AF +L L + I +L+ PNL ++
Sbjct: 262 VIPDGAFGGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHCLVIRGASLVQWFPNLTGTVHL 321
Query: 313 XXXXXXXXXXXXXXXXXAFSLTPLGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINL 372
+ L TL DLS NN ++ S F +L+ +I+L
Sbjct: 322 ESLTLTGTKISSIPDDLCQNQKMLRTL-----DLSYNNIRDLPS--FNGCRALE--EISL 372
Query: 373 IPN-LDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEAS 431
N + I + F L + ++ N+ ++++ S F + ++ + N L+
Sbjct: 373 QRNQISLIKENTFQGLTSLRILDLSRNL-IREIHSGAFAKLGTITNLDVSFNELTS---- 427
Query: 432 HFPLERISFLD 442
FP E ++ L+
Sbjct: 428 -FPTEGLNGLN 437
Score = 154 (59.3 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 80/325 (24%), Positives = 139/325 (42%)
Query: 52 EVQTIILRENRISNVHYT-LSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEI 110
+++ + L +N ++ V LS L++L L++N I+ + F + L+ L++ N+I
Sbjct: 154 QLRHLWLDDNSLTEVPVRPLSNLPTLQALTLALNNISSIPDFAFTNLSSLVVLHLHNNKI 213
Query: 111 SALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSL 170
+LS+ F GL L+TLDL+YN + + A + L+ L N+I+ D F
Sbjct: 214 KSLSQHCFDGLDNLETLDLNYNYLDEFPQ-AIKALPSLKELGFHSNSISVIPDGA-FGGN 271
Query: 171 KSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLN-ENLIETVLDNSFP-FTLT-NLHTL 227
LR + L +N + V N+ NL LH L + +L++ FP T T +L +L
Sbjct: 272 PLLRTIHLYDNPLSFVGNSAFHNL--SDLHCLVIRGASLVQW-----FPNLTGTVHLESL 324
Query: 228 ALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDS 287
L + L +P+ + AL + L N S I
Sbjct: 325 TLTGTKISSIPDDLCQNQKMLRTLDLSYNNIRDLPS--FNGCRALEEISLQRNQISLIKE 382
Query: 288 VAFKSLFSLKLVKI--NLIPNLDSIDQXXXXXXXXXXXXXXXXXAFSLTPLGTLKCDRLD 345
F+ L SL+++ + NLI + S +F L L ++L
Sbjct: 383 NTFQGLTSLRILDLSRNLIREIHSGAFAKLGTITNLDVSFNELTSFPTEGLNGL--NQLK 440
Query: 346 LSGNNFSNIDSVAFKSLFSLKLVKI 370
L GN F D++A + +L+ + +
Sbjct: 441 LVGN-FKLKDALAARDFANLRSLSV 464
Score = 142 (55.0 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 49/153 (32%), Positives = 81/153 (52%)
Query: 53 VQTIILRENRISNVHYTLSFYIE-LRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEIS 111
++++ L +IS++ L + LR+LDLS N I L S F L +++ N+IS
Sbjct: 321 LESLTLTGTKISSIPDDLCQNQKMLRTLDLSYNNIRDLPS--FNGCRALEEISLQRNQIS 378
Query: 112 ALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLK 171
+ ++TF+GL L+ LDLS N I I+ AF + L +SFN +T F +E + L
Sbjct: 379 LIKENTFQGLTSLRILDLSRNLIREIHSGAFAKLGTITNLDVSFNELTSFP-TEGLNGLN 437
Query: 172 SLRILKLDNNQILD-VPNNVLSNLPHQSLHYLY 203
L+++ N ++ D + +NL S+ Y Y
Sbjct: 438 QLKLV--GNFKLKDALAARDFANLRSLSVPYAY 468
>UNIPROTKB|Q9Z2H4 [details] [associations]
symbol:Lgr4 "Leucine-rich repeat-containing G-protein
coupled receptor 4" species:10116 "Rattus norvegicus" [GO:0016500
"protein-hormone receptor activity" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS00237 PROSITE:PS50262 PROSITE:PS51450 EMBL:AF061443
RGD:628615 GO:GO:0016021 GO:GO:0005886 GO:GO:0045892 GO:GO:0045893
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0030539
GO:GO:0090190 GO:GO:0050673 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0016500 GO:GO:0061290 GO:GO:0072282 CTD:55366
HOVERGEN:HBG031675 KO:K04309 OrthoDB:EOG476JZH GO:GO:0072202
GO:GO:0072224 HOGENOM:HOG000231829 IPI:IPI00339207
RefSeq:NP_775450.1 UniGene:Rn.162671 ProteinModelPortal:Q9Z2H4
PhosphoSite:Q9Z2H4 GeneID:286994 KEGG:rno:286994 UCSC:RGD:628615
InParanoid:Q9Z2H4 NextBio:625274 ArrayExpress:Q9Z2H4
Genevestigator:Q9Z2H4 GermOnline:ENSRNOG00000005715 Uniprot:Q9Z2H4
Length = 951
Score = 216 (81.1 bits), Expect = 4.7e-14, P = 4.7e-14
Identities = 109/383 (28%), Positives = 164/383 (42%)
Query: 77 RSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISV 136
++LD+S+N I L F+ L L ++ N++S + GLKELK L L N++
Sbjct: 60 QALDISMNNITQLPEDAFKSFPFLEELQLAGNDLSLIHPKALSGLKELKVLTLQNNQLRT 119
Query: 137 INKTAFRDTLHLELLILSFNNITYF-EDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLP 195
+ A L+ L L N+IT EDS F L LR L LD+N + +VP LSNLP
Sbjct: 120 VPSEAIHGLSALQSLRLDANHITSVPEDS--FEGLVQLRHLWLDDNSLTEVPVRPLSNLP 177
Query: 196 HQSLHYLYLNENLIETVLDNSFPFT-LTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXX 254
+L L L N I ++ D F FT L++L L L L L
Sbjct: 178 --TLQALTLALNNISSIPD--FAFTNLSSLVVLHLHNNKIKSLSQHCFDGLDNLETLDLN 233
Query: 255 XXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQXX 314
P + + L +L L N+ S I AF L+ + + P L +
Sbjct: 234 YNYLDEFP-QAIKALPSLKELGFHSNSISVIPDGAFGGNPLLRTIHLYDNP-LSFVGNSA 291
Query: 315 XXXXXXXXXXXXXXXAF-----SLTPLGTLKCDRLDLSGNNFSNI-DSVAF--KSLFSLK 366
+ +LT GT+ + L L+G S+I D + K L +L
Sbjct: 292 FHNLSDLHCLVIRGASLVQWFPNLT--GTVHLESLTLTGTKISSIPDDLCQNQKMLRTLD 349
Query: 367 LVKINLIPNLDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLS 426
L N I +L S + ++ I L+ N+ +K+ FQG T+L+ + L N +
Sbjct: 350 L-SYNNIRDLPSFNGCRALEEISLQR---NQISLIKE---NTFQGLTSLRILDLSRNLIR 402
Query: 427 HLEASHFP-LERISFLDLSDNPL 448
+ + F L I+ LD+S N L
Sbjct: 403 EIHSGAFAKLGTITNLDVSFNEL 425
Score = 194 (73.4 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 103/409 (25%), Positives = 169/409 (41%)
Query: 23 PSRCQCFDQKLEASCTD-AGLEVVPIQLNPEVQTIILRENRISNVH-YTLSFYIELRSLD 80
P F Q L+ S + L + P ++ + L N +S +H LS EL+ L
Sbjct: 52 PEGLSAFTQALDISMNNITQLPEDAFKSFPFLEELQLAGNDLSLIHPKALSGLKELKVLT 111
Query: 81 LSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKT 140
L N++ + S + L +L + N I+++ +D+F+GL +L+ L L N ++ +
Sbjct: 112 LQNNQLRTVPSEAIHGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSLTEVPVR 171
Query: 141 AFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNV---LSNLPHQ 197
+ L+ L L+ NNI+ D F++L SL +L L NN+I + + L NL
Sbjct: 172 PLSNLPTLQALTLALNNISSIPDFA-FTNLSSLVVLHLHNNKIKSLSQHCFDGLDNLETL 230
Query: 198 SLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXX 257
L+Y YL+E + + + P +L L + LRT+H
Sbjct: 231 DLNYNYLDE-FPQAI--KALP-SLKELGFHSNSISVIPDGAFGGNPLLRTIHLYDNPLSF 286
Query: 258 XXAIPTKQLSKLSALVNLDLSGNN-FSNIDSVAFKSLFSLKLVKINLIPNLDSIDQXXXX 316
LS L LV S F N+ +L KI+ IP+ +Q
Sbjct: 287 VGNSAFHNLSDLHCLVIRGASLVQWFPNLTGTVHLESLTLTGTKISSIPDDLCQNQKMLR 346
Query: 317 XXXXXXXXXXXXXAFSLTPLGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKI--NLIP 374
+F+ G + + L N S I F+ L SL+++ + NLI
Sbjct: 347 TLDLSYNNIRDLPSFN----GCRALEEISLQRNQISLIKENTFQGLTSLRILDLSRNLIR 402
Query: 375 NLDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGN 423
+ S AF +L T I N +++ +L S +G L + L GN
Sbjct: 403 EIHS---GAFA---KLGT-ITNLDVSFNELTSFPTEGLNGLNQLKLVGN 444
Score = 183 (69.5 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 99/431 (22%), Positives = 176/431 (40%)
Query: 21 ICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNV-HYTLSFYIELRSL 79
+C + C C D C+ GL VP L+ Q + + N I+ + + L L
Sbjct: 28 LCAAPCSC-DGDRRVDCSGKGLTAVPEGLSAFTQALDISMNNITQLPEDAFKSFPFLEEL 86
Query: 80 DLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINK 139
L+ N ++++ +L L + N++ + + GL L++L L N I+ + +
Sbjct: 87 QLAGNDLSLIHPKALSGLKELKVLTLQNNQLRTVPSEAIHGLSALQSLRLDANHITSVPE 146
Query: 140 TAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSL 199
+F + L L L N++T + S+L +L+ L L N I +P+ +NL SL
Sbjct: 147 DSFEGLVQLRHLWLDDNSLTEVPVRPL-SNLPTLQALTLALNNISSIPDFAFTNL--SSL 203
Query: 200 HYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXX 259
L+L+ N I+++ + F L NL TL L L +L
Sbjct: 204 VVLHLHNNKIKSLSQHCFD-GLDNLETLDLNYNYLDEFPQAIKA-LPSLKELGFHSNSIS 261
Query: 260 AIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKI---NLI---PNLD-SIDQ 312
IP L + L N S + + AF +L L + I +L+ PNL ++
Sbjct: 262 VIPDGAFGGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHCLVIRGASLVQWFPNLTGTVHL 321
Query: 313 XXXXXXXXXXXXXXXXXAFSLTPLGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINL 372
+ L TL DLS NN ++ S F +L+ +I+L
Sbjct: 322 ESLTLTGTKISSIPDDLCQNQKMLRTL-----DLSYNNIRDLPS--FNGCRALE--EISL 372
Query: 373 IPN-LDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEAS 431
N + I + F L + ++ N+ ++++ S F + ++ + N L+
Sbjct: 373 QRNQISLIKENTFQGLTSLRILDLSRNL-IREIHSGAFAKLGTITNLDVSFNELTS---- 427
Query: 432 HFPLERISFLD 442
FP E ++ L+
Sbjct: 428 -FPTEGLNGLN 437
Score = 154 (59.3 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 80/325 (24%), Positives = 139/325 (42%)
Query: 52 EVQTIILRENRISNVHYT-LSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEI 110
+++ + L +N ++ V LS L++L L++N I+ + F + L+ L++ N+I
Sbjct: 154 QLRHLWLDDNSLTEVPVRPLSNLPTLQALTLALNNISSIPDFAFTNLSSLVVLHLHNNKI 213
Query: 111 SALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSL 170
+LS+ F GL L+TLDL+YN + + A + L+ L N+I+ D F
Sbjct: 214 KSLSQHCFDGLDNLETLDLNYNYLDEFPQ-AIKALPSLKELGFHSNSISVIPDGA-FGGN 271
Query: 171 KSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLN-ENLIETVLDNSFP-FTLT-NLHTL 227
LR + L +N + V N+ NL LH L + +L++ FP T T +L +L
Sbjct: 272 PLLRTIHLYDNPLSFVGNSAFHNL--SDLHCLVIRGASLVQW-----FPNLTGTVHLESL 324
Query: 228 ALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDS 287
L + L +P+ + AL + L N S I
Sbjct: 325 TLTGTKISSIPDDLCQNQKMLRTLDLSYNNIRDLPS--FNGCRALEEISLQRNQISLIKE 382
Query: 288 VAFKSLFSLKLVKI--NLIPNLDSIDQXXXXXXXXXXXXXXXXXAFSLTPLGTLKCDRLD 345
F+ L SL+++ + NLI + S +F L L ++L
Sbjct: 383 NTFQGLTSLRILDLSRNLIREIHSGAFAKLGTITNLDVSFNELTSFPTEGLNGL--NQLK 440
Query: 346 LSGNNFSNIDSVAFKSLFSLKLVKI 370
L GN F D++A + +L+ + +
Sbjct: 441 LVGN-FKLKDALAARDFANLRSLSV 464
Score = 142 (55.0 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 49/153 (32%), Positives = 81/153 (52%)
Query: 53 VQTIILRENRISNVHYTLSFYIE-LRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEIS 111
++++ L +IS++ L + LR+LDLS N I L S F L +++ N+IS
Sbjct: 321 LESLTLTGTKISSIPDDLCQNQKMLRTLDLSYNNIRDLPS--FNGCRALEEISLQRNQIS 378
Query: 112 ALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLK 171
+ ++TF+GL L+ LDLS N I I+ AF + L +SFN +T F +E + L
Sbjct: 379 LIKENTFQGLTSLRILDLSRNLIREIHSGAFAKLGTITNLDVSFNELTSFP-TEGLNGLN 437
Query: 172 SLRILKLDNNQILD-VPNNVLSNLPHQSLHYLY 203
L+++ N ++ D + +NL S+ Y Y
Sbjct: 438 QLKLV--GNFKLKDALAARDFANLRSLSVPYAY 468
>UNIPROTKB|Q7L985 [details] [associations]
symbol:LINGO2 "Leucine-rich repeat and immunoglobulin-like
domain-containing nogo receptor-interacting protein 2" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 EMBL:CH471071
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 eggNOG:NOG278536 HOGENOM:HOG000246971
HOVERGEN:HBG057546 EMBL:AY358114 EMBL:AK056372 EMBL:AK172834
EMBL:AK290972 EMBL:BC137514 IPI:IPI00001120 RefSeq:NP_001245211.1
RefSeq:NP_689783.1 UniGene:Hs.662661 UniGene:Hs.739574
ProteinModelPortal:Q7L985 SMR:Q7L985 STRING:Q7L985
PhosphoSite:Q7L985 DMDM:172046190 PaxDb:Q7L985 PRIDE:Q7L985
Ensembl:ENST00000308675 Ensembl:ENST00000379992 GeneID:158038
KEGG:hsa:158038 UCSC:uc003zqu.1 CTD:158038 GeneCards:GC09M027940
HGNC:HGNC:21207 HPA:CAB025361 HPA:HPA016633 MIM:609793
neXtProt:NX_Q7L985 PharmGKB:PA162394096 InParanoid:Q7L985
OMA:DQDSGMY OrthoDB:EOG4NS3B7 PhylomeDB:Q7L985 GenomeRNAi:158038
NextBio:87602 Bgee:Q7L985 CleanEx:HS_LINGO2 Genevestigator:Q7L985
Uniprot:Q7L985
Length = 606
Score = 213 (80.0 bits), Expect = 4.8e-14, P = 4.8e-14
Identities = 81/295 (27%), Positives = 123/295 (41%)
Query: 10 LILALTKLNKAI-CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVH- 67
L + L + I CP+RC+C Q SC L +P + E + + L +NR+ +V+
Sbjct: 15 LAVVLIFMGSTIGCPARCECSAQNKSVSCHRRRLIAIPEGIPIETKILDLSKNRLKSVNP 74
Query: 68 YTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTL 127
Y L +DLS N I + F L +L + N + + F GL L L
Sbjct: 75 EEFISYPLLEEIDLSDNIIANVEPGAFNNLFNLRSLRLKGNRLKLVPLGVFTGLSNLTKL 134
Query: 128 DLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVP 187
D+S NKI ++ F+D +L+ L + N++ Y FS L SL L L+ + VP
Sbjct: 135 DISENKIVILLDYMFQDLHNLKSLEVGDNDLVYISH-RAFSGLLSLEQLTLEKCNLTAVP 193
Query: 188 NNVLSNLPHQ-SLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLR 246
LS+L SLH +LN N + F L +L + L
Sbjct: 194 TEALSHLRSLISLHLKHLNINNMPVYAFKRL-FHLKHLEIDYWPLLDMMPANSLYGLNLT 252
Query: 247 TLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKI 301
+L +P L L +L+LS N S I++ F L L+ + I
Sbjct: 253 SL---SVTNTNLSTVPFLAFKHLVYLTHLNLSYNPISTIEAGMFSDLIRLQELHI 304
Score = 155 (59.6 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 72/262 (27%), Positives = 116/262 (44%)
Query: 51 PEVQTIILRENRISNVHY-TLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNE 109
P ++ I L +N I+NV + LRSL L N++ ++ F + L L+IS N+
Sbjct: 81 PLLEEIDLSDNIIANVEPGAFNNLFNLRSLRLKGNRLKLVPLGVFTGLSNLTKLDISENK 140
Query: 110 ISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSS 169
I L F+ L LK+L++ N + I+ AF L LE L L N+T +E S
Sbjct: 141 IVILLDYMFQDLHNLKSLEVGDNDLVYISHRAFSGLLSLEQLTLEKCNLTAVP-TEALSH 199
Query: 170 LKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNE-NLIETVLDNSFPFTLTNLHTLA 228
L+SL L L + I ++P L H L +L ++ L++ + NS + L NL +L+
Sbjct: 200 LRSLISLHLKHLNINNMPVYAFKRLFH--LKHLEIDYWPLLDMMPANSL-YGL-NLTSLS 255
Query: 229 LXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSV 288
+ L L I S L L L + G I+
Sbjct: 256 VTNTNLSTVPFLAFKHLVYLTHLNLSYNPISTIEAGMFSDLIRLQELHIVGAQLRTIEPH 315
Query: 289 AFKSLFSLKLVKI--NLIPNLD 308
+F+ L L+++ + NL+ L+
Sbjct: 316 SFQGLRFLRVLNVSQNLLETLE 337
Score = 139 (54.0 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 77/312 (24%), Positives = 123/312 (39%)
Query: 146 LHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLN 205
+ ++L LS N + E F S L + L +N I +V +NL +L L L
Sbjct: 57 IETKILDLSKNRLKSVNPEE-FISYPLLEEIDLSDNIIANVEPGAFNNL--FNLRSLRLK 113
Query: 206 ENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQ 265
N ++ V F L+NL L + L L I +
Sbjct: 114 GNRLKLVPLGVFT-GLSNLTKLDISENKIVILLDYMFQDLHNLKSLEVGDNDLVYISHRA 172
Query: 266 LSKLSALVNLDLSGNNFSNIDSVAF---KSLFSLKLVKINLIPNLDSID-QXXXXXXXXX 321
S L +L L L N + + + A +SL SL L +N I N+ +
Sbjct: 173 FSGLLSLEQLTLEKCNLTAVPTEALSHLRSLISLHLKHLN-INNMPVYAFKRLFHLKHLE 231
Query: 322 XXXXXXXXAFSLTPLGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQ 381
L L L ++ N S + +AFK L L + ++ P + +I+
Sbjct: 232 IDYWPLLDMMPANSLYGLNLTSLSVTNTNLSTVPFLAFKHLVYLTHLNLSYNP-ISTIEA 290
Query: 382 RAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFPLER-ISF 440
F D I+L+ + I L+ + FQG L+ +++ N L LE + F R +
Sbjct: 291 GMFSDLIRLQELHI-VGAQLRTIEPHSFQGLRFLRVLNVSQNLLETLEENVFSSPRALEV 349
Query: 441 LDLSDNPLHCDC 452
L +++NPL CDC
Sbjct: 350 LSINNNPLACDC 361
>RGD|1359125 [details] [associations]
symbol:Omg "oligodendrocyte-myelin glycoprotein" species:10116
"Rattus norvegicus" [GO:0031102 "neuron projection regeneration"
evidence=IEA;ISO] [GO:0042802 "identical protein binding"
evidence=IEA;ISO] [GO:0048683 "regulation of collateral sprouting
of intact axon in response to injury" evidence=IEA;ISO]
InterPro:IPR001611 PROSITE:PS51450 RGD:1359125 InterPro:IPR003591
SMART:SM00369 GO:GO:0031102 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR025875 Pfam:PF12799 HSSP:P07359 CTD:4974
HOVERGEN:HBG007868 KO:K16666 OMA:SSNKLWT GO:GO:0048683
GeneTree:ENSGT00690000102271 EMBL:BC087723 EMBL:AY316298
IPI:IPI00382315 RefSeq:NP_001005898.3 UniGene:Rn.163139
UniGene:Rn.209766 STRING:Q7TQ25 Ensembl:ENSRNOT00000018891
GeneID:450224 KEGG:rno:450224 InParanoid:Q7TQ25 NextBio:697154
Genevestigator:Q7TQ25 Uniprot:Q7TQ25
Length = 440
Score = 210 (79.0 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 66/226 (29%), Positives = 109/226 (48%)
Query: 6 TCIFLILALTKLNKAICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISN 65
+C+F++L LT ICP +C C ++ C+ L +P L + + L N ++
Sbjct: 10 SCLFILLFLTPGILCICPLQCICTERHRHVDCSGRNLTTLPPGLQENIIHLNLSYNHFTD 69
Query: 66 VHYTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELK 125
+H L+ Y LR+LD+S N++ L + + L N++ + N I L K LK
Sbjct: 70 LHNQLTPYTNLRTLDISNNRLESLPA---QLPRSLWNMSAANNNIKLLDKSDTAYQWNLK 126
Query: 126 TLDLSYNKISVINKTAFRDTLH-LELLILSFNNITYFEDSEIFSSLKS-LRILKLDNNQI 183
LD+S N + + ++TL LE+L LS N + + +++ S L I+ L NN +
Sbjct: 127 YLDVSKNMLEKV--VLIKNTLRSLEVLNLSSNKLW-----TVPTNMPSKLHIVDLSNNSL 179
Query: 184 LDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLAL 229
+ L NL + L +LYL+ N + D SF L L + L
Sbjct: 180 TQILPGTLINLTN--LTHLYLHNNKFTFIPDQSFD-QLLQLQEITL 222
>MGI|MGI:3605040 [details] [associations]
symbol:Lrrc24 "leucine rich repeat containing 24"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:3605040 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
eggNOG:NOG255871 GeneTree:ENSGT00700000104028 CTD:441381
HOGENOM:HOG000234857 HOVERGEN:HBG079563 OMA:NITLAHA
OrthoDB:EOG4DR9CG EMBL:AK048678 EMBL:AK078176 EMBL:BC116884
EMBL:BC116886 IPI:IPI00221813 RefSeq:NP_932787.1 UniGene:Mm.289666
ProteinModelPortal:Q8BHA1 SMR:Q8BHA1 PRIDE:Q8BHA1
Ensembl:ENSMUST00000049956 GeneID:378937 KEGG:mmu:378937
UCSC:uc007wme.1 InParanoid:Q14AD4 NextBio:401012 Bgee:Q8BHA1
CleanEx:MM_LRRC24 Genevestigator:Q8BHA1
GermOnline:ENSMUSG00000033707 Uniprot:Q8BHA1
Length = 521
Score = 211 (79.3 bits), Expect = 5.8e-14, P = 5.8e-14
Identities = 61/187 (32%), Positives = 93/187 (49%)
Query: 22 CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHY-TLSFYIELRSLD 80
CP+ C+C+ +E C L VVP + P QT+ L++N I+++ +L+ LR L
Sbjct: 31 CPAACRCYSATVE--CGALRLRVVPPGIPPGTQTLFLQDNSIAHLEQGSLAPLAALRHLY 88
Query: 81 LSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKT 140
L N + L S F Q +LL L ++ N + L F GL +L+ L L+ N+++ +
Sbjct: 89 LHNNTLRALESGAFRAQPRLLELALTGNRLRGLRGGAFVGLVQLRVLYLAGNQLAKLLDF 148
Query: 141 AFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLH 200
F L+ L L N+I ED + + L SL +L L NQ+ + L P SL
Sbjct: 149 TFLHLPRLQELHLQENSIELLEDQAL-AGLSSLALLDLSRNQLGTISKEALQ--PLSSLQ 205
Query: 201 YLYLNEN 207
L L EN
Sbjct: 206 VLRLTEN 212
>UNIPROTKB|A5JVA0 [details] [associations]
symbol:TLR7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071260 "cellular response to mechanical stimulus"
evidence=IEA] [GO:0051607 "defense response to virus" evidence=IEA]
[GO:0045416 "positive regulation of interleukin-8 biosynthetic
process" evidence=IEA] [GO:0045359 "positive regulation of
interferon-beta biosynthetic process" evidence=IEA] [GO:0045356
"positive regulation of interferon-alpha biosynthetic process"
evidence=IEA] [GO:0045078 "positive regulation of interferon-gamma
biosynthetic process" evidence=IEA] [GO:0042346 "positive
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0035197 "siRNA binding" evidence=IEA] [GO:0034154 "toll-like
receptor 7 signaling pathway" evidence=IEA] [GO:0032757 "positive
regulation of interleukin-8 production" evidence=IEA] [GO:0032755
"positive regulation of interleukin-6 production" evidence=IEA]
[GO:0032722 "positive regulation of chemokine production"
evidence=IEA] [GO:0032009 "early phagosome" evidence=IEA]
[GO:0007252 "I-kappaB phosphorylation" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005768 "endosome" evidence=IEA] [GO:0005764
"lysosome" evidence=IEA] [GO:0003727 "single-stranded RNA binding"
evidence=IEA] [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0006955 "immune response" evidence=IEA] [GO:0004888
"transmembrane signaling receptor activity" evidence=IEA]
[GO:0002755 "MyD88-dependent toll-like receptor signaling pathway"
evidence=IEA] Pfam:PF00560 InterPro:IPR000157 InterPro:IPR001611
InterPro:IPR026880 Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450
GO:GO:0005783 GO:GO:0016021 GO:GO:0005886 GO:GO:0006955
GO:GO:0005768 GO:GO:0003727 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0032722 GO:GO:0032755
GO:GO:0005764 GO:GO:0051607 GO:GO:0032009 GO:GO:0003725
GO:GO:0032757 GO:GO:0071260 GO:GO:0035197 InterPro:IPR000372
SMART:SM00013 GO:GO:0045416 GO:GO:0042346 GO:GO:0045078
GO:GO:0007252 SUPFAM:SSF52200 GO:GO:0034154 GO:GO:0045359
GeneTree:ENSGT00680000099674 GO:GO:0045356 HOVERGEN:HBG018601
OMA:AFYLSHQ PANTHER:PTHR24365:SF1 EMBL:FP102063 EMBL:FP236647
EMBL:EF583901 UniGene:Ssc.100359 UniGene:Ssc.39344 STRING:A5JVA0
Ensembl:ENSSSCT00000013254 Ensembl:ENSSSCT00000035124
Uniprot:A5JVA0
Length = 1050
Score = 177 (67.4 bits), Expect = 6.2e-14, Sum P(2) = 6.2e-14
Identities = 55/161 (34%), Positives = 88/161 (54%)
Query: 77 RSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEIS-ALSKDTFKGLKELKTLDLSYNKIS 135
++LDLS N I + S F++ L LN+S N IS AL+ F+ L ELK LD S N++
Sbjct: 497 QTLDLSRNNIFFIRSSEFQHLTFLKCLNLSGNSISQALNGSEFQPLVELKYLDFSNNRLD 556
Query: 136 VINKTAFRDTLHLELLILSFNNITYFEDSEIFSSL---KSLRILK---LDNNQILDVPNN 189
+++ TAF + +LE+L +S N+ YF+ I L K+L++LK ++NN D+ +
Sbjct: 557 LLHSTAFEELRNLEVLDISSNS-HYFQSEGITHMLDFTKNLKVLKKLMMNNN---DIATS 612
Query: 190 VLSNLPHQSLHYLYLNENLIETVL---DNSFPFTLTNLHTL 227
+ + +SL L N ++ + DN + NLH L
Sbjct: 613 TSTTMESESLRILEFRGNHLDILWRDGDNRYLKFFKNLHKL 653
Score = 141 (54.7 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 54/186 (29%), Positives = 89/186 (47%)
Query: 53 VQTIILRENRISNVHYTLSFYIELRSLDLSVNKINVL---GSHN----FEYQNKLLNLNI 105
++ +++ N I+ T LR L+ N +++L G + F+ +KL L+I
Sbjct: 599 LKKLMMNNNDIATSTSTTMESESLRILEFRGNHLDILWRDGDNRYLKFFKNLHKLEELDI 658
Query: 106 SYNEISALSKDTFKGLK-ELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDS 164
S N +S L F G+ LKTL L+ N + N + +LE L LS+N + +
Sbjct: 659 SENSLSFLPSGVFDGMPPNLKTLSLAKNGLKSFNWGKLQYLQNLETLDLSYNQLKTVPE- 717
Query: 165 EIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFT-LTN 223
+ + +SL+ L L NN+I ++ L + L +L L+ N I+ + SFP L N
Sbjct: 718 RLSNCSRSLKKLILKNNEIRNLTKYFLQDA--FQLRHLDLSSNKIQVIQKTSFPENVLNN 775
Query: 224 LHTLAL 229
L L L
Sbjct: 776 LQILFL 781
Score = 132 (51.5 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 35/109 (32%), Positives = 60/109 (55%)
Query: 51 PEVQTIILRENRISNVHYTLSFYIE-LRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNE 109
P ++T+ L +N + + ++ Y++ L +LDLS N++ + L L + NE
Sbjct: 676 PNLKTLSLAKNGLKSFNWGKLQYLQNLETLDLSYNQLKTVPERLSNCSRSLKKLILKNNE 735
Query: 110 ISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTL--HLELLILSFN 156
I L+K + +L+ LDLS NKI VI KT+F + + +L++L L N
Sbjct: 736 IRNLTKYFLQDAFQLRHLDLSSNKIQVIQKTSFPENVLNNLQILFLHHN 784
Score = 122 (48.0 bits), Expect = 0.00087, P = 0.00087
Identities = 40/133 (30%), Positives = 68/133 (51%)
Query: 75 ELRSLDLSVNKINVLGSHNFE-YQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNK 133
+L LD+S N ++ L S F+ L L+++ N + + + + L+ L+TLDLSYN+
Sbjct: 652 KLEELDISENSLSFLPSGVFDGMPPNLKTLSLAKNGLKSFNWGKLQYLQNLETLDLSYNQ 711
Query: 134 ISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDV-----PN 188
+ + + + L+ LIL N I + + + LR L L +N+I + P
Sbjct: 712 LKTVPERLSNCSRSLKKLILKNNEIRNLTKYFLQDAFQ-LRHLDLSSNKIQVIQKTSFPE 770
Query: 189 NVLSNLPHQSLHY 201
NVL+NL LH+
Sbjct: 771 NVLNNLQILFLHH 783
Score = 118 (46.6 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 70/260 (26%), Positives = 108/260 (41%)
Query: 65 NVHYTLS--FYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLK 122
NV +++ ++ LR+L L K N + + + L L + N I+ + +D F L
Sbjct: 190 NVSFSIEKDAFLSLRNLKLLSLKDNNISAVPTVLPSTLTELFLYNNIIAKIQEDDFNNLS 249
Query: 123 ELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQ 182
+L+ LDLS N N F T E NN F +L L++L+L +N
Sbjct: 250 QLQVLDLSGNCPRCYN-VPFPCT-PCE------NNAPLQIHLHAFDALTELQVLRLHSNS 301
Query: 183 ILDVPNNVLSNLPHQSLHYLYLNEN-LIETVLDNSFPFTLTNLHTLALXXXX------XX 235
+ VP NL L L L++N L + + D F L NL L L
Sbjct: 302 LQYVPQRWFQNL--NKLKELDLSQNFLAKEIGDAKFLHLLPNLVKLDLSFNYELQVYHTF 359
Query: 236 XXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLS--GNNFSNIDSVA-FKS 292
+L+ L + + LS L L NL++ G NF I +++ FK
Sbjct: 360 MNLSDSFSSLKNLKVLRIKGYVFKELKSLNLSPLRNLPNLEVLDLGTNFIKIANLSIFKQ 419
Query: 293 LFSLKLV--KINLI-PNLDS 309
+LK + +N I P+ DS
Sbjct: 420 FKTLKFIDLSVNKISPSGDS 439
Score = 94 (38.1 bits), Expect = 3.7e-05, Sum P(3) = 3.7e-05
Identities = 61/248 (24%), Positives = 100/248 (40%)
Query: 4 FLTCIFLILALTKLNKAICPSRCQCFDQKLEA-------SCTDAGLEVVPIQLNPEVQTI 56
FL ++L L P C D L+A CTD L +P + +
Sbjct: 12 FLILFNIVLISELLGARWFPKTLPC-DVSLDAPNAHVIVDCTDKHLTAIPGGIPTNATNL 70
Query: 57 ILRENRISNVHYTLSFYIE-LRSLDLSVNKINV-LGSHNFEYQNKLLNLNISYNEISALS 114
L N I+++ ++ L +D N I V LG + +L S+++++ L
Sbjct: 71 TLTINHIASITPASFQQLDHLVEIDFRCNCIPVRLGPKDNLCTRRLQIKPSSFSKLTYLK 130
Query: 115 KDTFKG--LKE--------LKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDS 164
G L E L+ L L N I I K + +LE+L L N Y
Sbjct: 131 ALYLDGNQLLEIPRDLPPSLQLLSLEANNIFWIMKENLTELANLEMLYLG-QNCYYRNPC 189
Query: 165 EIFSSLKSLRILKLDNNQILDVPNNVLSNLPH---QSLHYLYLNENLIETVLDNSFPFTL 221
+ S++ L L N ++L + +N +S +P +L L+L N+I + ++ F L
Sbjct: 190 NVSFSIEKDAFLSLRNLKLLSLKDNNISAVPTVLPSTLTELFLYNNIIAKIQEDDFN-NL 248
Query: 222 TNLHTLAL 229
+ L L L
Sbjct: 249 SQLQVLDL 256
Score = 90 (36.7 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 56/209 (26%), Positives = 95/209 (45%)
Query: 261 IPTKQLSKLSALVNLDLSGNNFSN-IDSVAFKSLFSLKLV-----KINLIPN-----LDS 309
I + + L+ L L+LSGN+ S ++ F+ L LK + +++L+ + L +
Sbjct: 509 IRSSEFQHLTFLKCLNLSGNSISQALNGSEFQPLVELKYLDFSNNRLDLLHSTAFEELRN 568
Query: 310 IDQXXXXXXXXXXXXXXXXXAFSLTP-LGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLV 368
++ T L LK +L ++ N+ + S +S SL+++
Sbjct: 569 LEVLDISSNSHYFQSEGITHMLDFTKNLKVLK--KLMMNNNDIATSTSTTMESE-SLRIL 625
Query: 369 KINLIPNLDSI----DQR--AFVDNI-QLETVIINENMNLKQLPSKLFQGNT-NLKSVSL 420
+ +LD + D R F N+ +LE + I+EN +L LPS +F G NLK++SL
Sbjct: 626 EFRG-NHLDILWRDGDNRYLKFFKNLHKLEELDISEN-SLSFLPSGVFDGMPPNLKTLSL 683
Query: 421 KGNSLSHLEASHFP-LERISFLDLSDNPL 448
N L L+ + LDLS N L
Sbjct: 684 AKNGLKSFNWGKLQYLQNLETLDLSYNQL 712
Score = 89 (36.4 bits), Expect = 6.2e-14, Sum P(2) = 6.2e-14
Identities = 34/114 (29%), Positives = 60/114 (52%)
Query: 340 KCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSID--QRAFVDNIQLETVIIN 396
K + LD+S N+ S + S F + L ++L N L S + + ++ N LET+ ++
Sbjct: 652 KLEELDISENSLSFLPSGVFDGM-PPNLKTLSLAKNGLKSFNWGKLQYLQN--LETLDLS 708
Query: 397 ENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFPLE--RISFLDLSDNPL 448
N LK +P +L + +LK + LK N + +L +F + ++ LDLS N +
Sbjct: 709 YNQ-LKTVPERLSNCSRSLKKLILKNNEIRNL-TKYFLQDAFQLRHLDLSSNKI 760
Score = 88 (36.0 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 50/190 (26%), Positives = 82/190 (43%)
Query: 42 LEVVPIQLNPEVQTIILREN--RISNVHYTLSFYIELRSLDLSVNKINVLG-SHNFEYQN 98
L + P++ P ++ + L N +I+N+ F L+ +DLSVNKI+ G S + +
Sbjct: 388 LNLSPLRNLPNLEVLDLGTNFIKIANLSIFKQFKT-LKFIDLSVNKISPSGDSSESGFCS 446
Query: 99 KLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRD-TLHLELLILSFNN 157
+ S+ S F+ + ++ NK + D +++ + L LS NN
Sbjct: 447 GMRTSAESHGPQVLESLHYFRYDEYARSCRFK-NKEPSSSLPLNEDCSMYGQTLDLSRNN 505
Query: 158 ITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSF 217
I + SE F L L+ L L N I N P L YL + N ++ + +F
Sbjct: 506 IFFIRSSE-FQHLTFLKCLNLSGNSISQALNGSEFQ-PLVELKYLDFSNNRLDLLHSTAF 563
Query: 218 PFTLTNLHTL 227
L NL L
Sbjct: 564 E-ELRNLEVL 572
Score = 85 (35.0 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 24/60 (40%), Positives = 36/60 (60%)
Query: 391 ETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSH-LEASHF-PLERISFLDLSDNPL 448
+T+ ++ N N+ + S FQ T LK ++L GNS+S L S F PL + +LD S+N L
Sbjct: 497 QTLDLSRN-NIFFIRSSEFQHLTFLKCLNLSGNSISQALNGSEFQPLVELKYLDFSNNRL 555
Score = 67 (28.6 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 23/113 (20%), Positives = 50/113 (44%)
Query: 344 LDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFVDNIQLETVIINENMNLKQ 403
L L+ N + + + L +L+ + ++ L ++ +R + L+ +I+ N ++
Sbjct: 681 LSLAKNGLKSFNWGKLQYLQNLETLDLSY-NQLKTVPERLSNCSRSLKKLILKNN-EIRN 738
Query: 404 LPSKLFQGNTNLKSVSLKGNSLSHLEASHFP---LERISFLDLSDNPLHCDCN 453
L Q L+ + L N + ++ + FP L + L L N C+C+
Sbjct: 739 LTKYFLQDAFQLRHLDLSSNKIQVIQKTSFPENVLNNLQILFLHHNRFLCNCD 791
Score = 66 (28.3 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 30/104 (28%), Positives = 49/104 (47%)
Query: 344 LDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFVDNIQLETVIINENMNLKQ 403
LDLS NN I S F+ L LK + ++ +++ F ++L+ + + N L
Sbjct: 499 LDLSRNNIFFIRSSEFQHLTFLKCLNLSGNSISQALNGSEFQPLVELKYLDFSNN-RLDL 557
Query: 404 LPSKLFQGNTNLKSVSLKGNSLSHLEASHFPLERIS-FLDLSDN 446
L S F+ NL+ + + NS H +F E I+ LD + N
Sbjct: 558 LHSTAFEELRNLEVLDISSNS--H----YFQSEGITHMLDFTKN 595
Score = 45 (20.9 bits), Expect = 3.7e-05, Sum P(3) = 3.7e-05
Identities = 18/38 (47%), Positives = 20/38 (52%)
Query: 275 LDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQ 312
LDLS NN I S F+ L LK +NL N SI Q
Sbjct: 499 LDLSRNNIFFIRSSEFQHLTFLKC--LNLSGN--SISQ 532
>UNIPROTKB|F1NEZ4 [details] [associations]
symbol:SLITRK2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007409 "axonogenesis" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00680000099775 OMA:LQADYNY
EMBL:AADN02073144 IPI:IPI00582200 Ensembl:ENSGALT00000014971
Uniprot:F1NEZ4
Length = 831
Score = 152 (58.6 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 58/183 (31%), Positives = 89/183 (48%)
Query: 101 LNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITY 160
LN+N +IS +S+ K K L L+ N + VI +T + L+LL L N I
Sbjct: 333 LNVNCQEKKISNISELHPKPTTP-KKLYLTSNYLQVIYRTDLAEYSSLDLLHLGNNRIAV 391
Query: 161 FEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFT 220
++ F++L SLR L L+ N + + ++ L QSL YLYL N+I+ +L ++F T
Sbjct: 392 IQEGA-FTNLTSLRRLYLNGNYLEILYPSMFDGL--QSLQYLYLEYNVIKEILPHTFD-T 447
Query: 221 LTNLHTLALXXXXXXXX--XXXXXVTLRTLHXXXXXXXXXXAIPTKQ-LSKLSALVNLDL 277
L+NLH L L +L L+ +P + L +LSAL+ +DL
Sbjct: 448 LSNLHLLFLNNNLLRSLPDNVFGGTSLTRLNLRNNHFSH---LPVRGVLDRLSALIQIDL 504
Query: 278 SGN 280
N
Sbjct: 505 QEN 507
Score = 150 (57.9 bits), Expect = 6.3e-14, Sum P(3) = 6.3e-14
Identities = 54/195 (27%), Positives = 94/195 (48%)
Query: 21 ICP-SRCQCFDQK--LEASCTDAGLEVVPIQLNP--EVQTIILRENRISNVHYTLSF--Y 73
IC SRC C +++ L +C + G + + L P ++ + L N ++ + + F Y
Sbjct: 2 ICSKSRCPCEEKENVLNINCENKGFTTISLLLPPPSKIYQLFLNGNALTRL-FPNEFVNY 60
Query: 74 IELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNK 133
+L L N + + + F L L+++ N++ L +DTF GL+ L+ L YN
Sbjct: 61 SNAVTLHLGNNDMQEIHTGAFSGLRTLKRLHLNNNKLEVLKEDTFLGLESLEYLQADYNY 120
Query: 134 ISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVP-NNVLS 192
IS I AF L++LIL+ +N+ S +F + L L L N++ +P VL
Sbjct: 121 ISAIEAGAFNKLNKLKVLILN-DNLLLSLPSNVFRFVL-LTHLDLRGNRLKMMPFAGVLE 178
Query: 193 NLPHQSLHYLYLNEN 207
++ + + L EN
Sbjct: 179 HIG--GIMEIQLEEN 191
Score = 149 (57.5 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 61/196 (31%), Positives = 89/196 (45%)
Query: 22 CPSRCQCFDQKLE----ASCTDAGLEVVPIQLNPEVQT---IILRENRISNVHYT-LSFY 73
CP C C Q L+ +C + + + +L+P+ T + L N + ++ T L+ Y
Sbjct: 318 CPDGCICTSQSLDNGLNVNCQEKKISNIS-ELHPKPTTPKKLYLTSNYLQVIYRTDLAEY 376
Query: 74 IELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNK 133
L L L N+I V+ F L L ++ N + L F GL+ L+ L L YN
Sbjct: 377 SSLDLLHLGNNRIAVIQEGAFTNLTSLRRLYLNGNYLEILYPSMFDGLQSLQYLYLEYNV 436
Query: 134 ISVINKTAFRDTL-HLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVP-NNVL 191
I I F DTL +L LL L+ N + D+ +F SL L L NN +P VL
Sbjct: 437 IKEILPHTF-DTLSNLHLLFLNNNLLRSLPDN-VFGGT-SLTRLNLRNNHFSHLPVRGVL 493
Query: 192 SNLPHQSLHYLYLNEN 207
L +L + L EN
Sbjct: 494 DRL--SALIQIDLQEN 507
Score = 113 (44.8 bits), Expect = 6.3e-14, Sum P(3) = 6.3e-14
Identities = 39/125 (31%), Positives = 61/125 (48%)
Query: 332 SLTPLGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFVDNIQLE 391
+ T L +L+ RL L+GN + F L SL+ + + + I F L
Sbjct: 396 AFTNLTSLR--RLYLNGNYLEILYPSMFDGLQSLQYLYLEYNV-IKEILPHTFDTLSNLH 452
Query: 392 TVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFPLERISFL---DLSDNPL 448
+ +N N+ L+ LP +F G T+L ++L+ N SHL L+R+S L DL +NP
Sbjct: 453 LLFLNNNL-LRSLPDNVF-GGTSLTRLNLRNNHFSHLPVRGV-LDRLSALIQIDLQENPW 509
Query: 449 HCDCN 453
C C+
Sbjct: 510 DCTCD 514
Score = 109 (43.4 bits), Expect = 1.6e-09, Sum P(3) = 1.6e-09
Identities = 37/128 (28%), Positives = 61/128 (47%)
Query: 98 NKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNN 157
+K+ L ++ N ++ L + F TL L N + I+ AF L+ L L+ N
Sbjct: 37 SKIYQLFLNGNALTRLFPNEFVNYSNAVTLHLGNNDMQEIHTGAFSGLRTLKRLHLNNNK 96
Query: 158 ITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSF 217
+ ++ + F L+SL L+ D N I + + L L L LN+NL+ ++ N F
Sbjct: 97 LEVLKE-DTFLGLESLEYLQADYNYISAIEAGAFNKL--NKLKVLILNDNLLLSLPSNVF 153
Query: 218 PFTL-TNL 224
F L T+L
Sbjct: 154 RFVLLTHL 161
Score = 71 (30.1 bits), Expect = 1.0e-05, Sum P(3) = 1.0e-05
Identities = 27/108 (25%), Positives = 40/108 (37%)
Query: 195 PHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXX 254
P ++ L+LN N + + N F +N TL L LRTL
Sbjct: 35 PPSKIYQLFLNGNALTRLFPNEF-VNYSNAVTLHLGNNDMQEIHTGAFSGLRTLKRLHLN 93
Query: 255 XXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
+ L +L L N S I++ AF L LK++ +N
Sbjct: 94 NNKLEVLKEDTFLGLESLEYLQADYNYISAIEAGAFNKLNKLKVLILN 141
Score = 46 (21.3 bits), Expect = 3.6e-07, Sum P(3) = 3.6e-07
Identities = 21/80 (26%), Positives = 35/80 (43%)
Query: 369 KINLIPN-LDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSH 427
K+ L N L I + + L+ + + N + + F T+L+ + L GN L
Sbjct: 357 KLYLTSNYLQVIYRTDLAEYSSLDLLHLGNN-RIAVIQEGAFTNLTSLRRLYLNGNYLEI 415
Query: 428 LEASHFP-LERISFLDLSDN 446
L S F L+ + +L L N
Sbjct: 416 LYPSMFDGLQSLQYLYLEYN 435
Score = 45 (20.9 bits), Expect = 6.3e-14, Sum P(3) = 6.3e-14
Identities = 9/32 (28%), Positives = 17/32 (53%)
Query: 507 IVLNNLKCSSPPDIKGLEVKAVPENSVHCESN 538
+V+N + C SP G +K + + ++ C N
Sbjct: 537 VVINEVICESPTKHSGEHLKFLSKEAI-CPEN 567
>UNIPROTKB|Q8IW52 [details] [associations]
symbol:SLITRK4 "SLIT and NTRK-like protein 4" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0016021 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 HOGENOM:HOG000290667
HOVERGEN:HBG056407 EMBL:AL080239 EMBL:CH471170 EMBL:BC040986
EMBL:AL713693 EMBL:AK057619 IPI:IPI00217146 RefSeq:NP_001171678.1
RefSeq:NP_001171679.1 RefSeq:NP_775101.1 UniGene:Hs.272284
ProteinModelPortal:Q8IW52 SMR:Q8IW52 PhosphoSite:Q8IW52
DMDM:46396931 PaxDb:Q8IW52 PRIDE:Q8IW52 DNASU:139065
Ensembl:ENST00000338017 Ensembl:ENST00000356928
Ensembl:ENST00000381779 GeneID:139065 KEGG:hsa:139065
UCSC:uc004fbx.3 CTD:139065 GeneCards:GC0XM142715 HGNC:HGNC:23502
HPA:HPA001039 MIM:300562 neXtProt:NX_Q8IW52 PharmGKB:PA134926932
InParanoid:Q8IW52 OMA:TVFVAFC OrthoDB:EOG4VHK5S PhylomeDB:Q8IW52
GenomeRNAi:139065 NextBio:83882 Bgee:Q8IW52 CleanEx:HS_SLITRK4
Genevestigator:Q8IW52 GermOnline:ENSG00000179542 Uniprot:Q8IW52
Length = 837
Score = 152 (58.6 bits), Expect = 7.4e-08, Sum P(2) = 7.4e-08
Identities = 61/198 (30%), Positives = 91/198 (45%)
Query: 22 CPSRCQC----FDQKLEASCTDAGL----EVVPIQLNPEVQTIILRENRISNVHYTLSFY 73
CP+ C C D L +C + + E++P LN + + + N I +V +S +
Sbjct: 342 CPAPCFCKTHPSDLGLSVNCQEKNIQSMSELIPKPLN--AKKLHVNGNSIKDVD--VSDF 397
Query: 74 IELRSLDL---SVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLS 130
+ LDL N+I V+ F L L ++ N+I L + F GL L+ L L
Sbjct: 398 TDFEGLDLLHLGSNQITVIKGDVFHNLTNLRRLYLNGNQIERLYPEIFSGLHNLQYLYLE 457
Query: 131 YNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVP-NN 189
YN I I+ F +L+LL L+ NN+ IFS R L L NN+ + +P +
Sbjct: 458 YNLIKEISAGTFDSMPNLQLLYLN-NNLLKSLPVYIFSGAPLAR-LNLRNNKFMYLPVSG 515
Query: 190 VLSNLPHQSLHYLYLNEN 207
VL L QSL + L N
Sbjct: 516 VLDQL--QSLTQIDLEGN 531
Score = 147 (56.8 bits), Expect = 6.8e-14, Sum P(3) = 6.8e-14
Identities = 53/173 (30%), Positives = 81/173 (46%)
Query: 21 ICPSRCQCF--DQKLEASCTDAGLEVVPIQLNPEVQTII-LR-ENRISNVHYTLSF--YI 74
IC + C C + L +C + P QL P L +N N+ Y +F +
Sbjct: 26 IC-NVCSCVSVENVLYVNCEKVSV-YRPNQLKPPWSNFYHLNFQNNFLNILYPNTFLNFS 83
Query: 75 ELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKI 134
SL L NK+ + F + L L+++ NE+ L DTF G++ L+ L YN I
Sbjct: 84 HAVSLHLGNNKLQNIEGGAFLGLSALKQLHLNNNELKILRADTFLGIENLEYLQADYNLI 143
Query: 135 SVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVP 187
I + AF L++LIL+ N I++ D+ IF SL L + N+I +P
Sbjct: 144 KYIERGAFNKLHKLKVLILNDNLISFLPDN-IFR-FASLTHLDIRGNRIQKLP 194
Score = 138 (53.6 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 57/193 (29%), Positives = 88/193 (45%)
Query: 101 LNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITY 160
L++N I ++S+ K L K L ++ N I ++ + F D L+LL L N IT
Sbjct: 357 LSVNCQEKNIQSMSELIPKPLNA-KKLHVNGNSIKDVDVSDFTDFEGLDLLHLGSNQITV 415
Query: 161 FEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFT 220
+ ++F +L +LR L L+ NQI + + S L H +L YLYL NLI+ + +F +
Sbjct: 416 IK-GDVFHNLTNLRRLYLNGNQIERLYPEIFSGL-H-NLQYLYLEYNLIKEISAGTFD-S 471
Query: 221 LTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQ-LSKLSALVNLDLSG 279
+ NL L L + L +P L +L +L +DL G
Sbjct: 472 MPNLQLLYLNNNLLKSLPVYIF-SGAPLARLNLRNNKFMYLPVSGVLDQLQSLTQIDLEG 530
Query: 280 NNFS-NIDSVAFK 291
N + D VA K
Sbjct: 531 NPWDCTCDLVALK 543
Score = 133 (51.9 bits), Expect = 2.3e-12, Sum P(3) = 2.3e-12
Identities = 37/132 (28%), Positives = 67/132 (50%)
Query: 79 LDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVIN 138
L+ N +N+L + F + ++L++ N++ + F GL LK L L+ N++ ++
Sbjct: 64 LNFQNNFLNILYPNTFLNFSHAVSLHLGNNKLQNIEGGAFLGLSALKQLHLNNNELKILR 123
Query: 139 KTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQS 198
F +LE L +N I Y E F+ L L++L L++N I +P+N+ S
Sbjct: 124 ADTFLGIENLEYLQADYNLIKYIERGA-FNKLHKLKVLILNDNLISFLPDNIFR---FAS 179
Query: 199 LHYLYLNENLIE 210
L +L + N I+
Sbjct: 180 LTHLDIRGNRIQ 191
Score = 118 (46.6 bits), Expect = 9.7e-11, Sum P(3) = 9.7e-11
Identities = 39/124 (31%), Positives = 61/124 (49%)
Query: 102 NLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYF 161
+LN N ++ L +TF +L L NK+ I AF L+ L L+ N +
Sbjct: 63 HLNFQNNFLNILYPNTFLNFSHAVSLHLGNNKLQNIEGGAFLGLSALKQLHLNNNELKIL 122
Query: 162 EDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPF-T 220
++ F +++L L+ D N I + + L H+ L L LN+NLI + DN F F +
Sbjct: 123 R-ADTFLGIENLEYLQADYNLIKYIERGAFNKL-HK-LKVLILNDNLISFLPDNIFRFAS 179
Query: 221 LTNL 224
LT+L
Sbjct: 180 LTHL 183
Score = 107 (42.7 bits), Expect = 6.8e-14, Sum P(3) = 6.8e-14
Identities = 35/115 (30%), Positives = 57/115 (49%)
Query: 343 RLDLSGNNFSNIDSVAFKSLFSLKLVKI--NLIPNLDSIDQRAFVDNIQLETVIINENMN 400
RL L+GN + F L +L+ + + NLI + S + N+QL + +N N+
Sbjct: 429 RLYLNGNQIERLYPEIFSGLHNLQYLYLEYNLIKEI-SAGTFDSMPNLQL--LYLNNNL- 484
Query: 401 LKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHF--PLERISFLDLSDNPLHCDCN 453
LK LP +F G L ++L+ N +L S L+ ++ +DL NP C C+
Sbjct: 485 LKSLPVYIFSG-APLARLNLRNNKFMYLPVSGVLDQLQSLTQIDLEGNPWDCTCD 538
Score = 76 (31.8 bits), Expect = 9.5e-11, Sum P(3) = 9.5e-11
Identities = 26/111 (23%), Positives = 52/111 (46%)
Query: 339 LKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFVDNIQLETVIINEN 398
L +L ++GN+ ++D F L L+ + + I F + L + +N N
Sbjct: 377 LNAKKLHVNGNSIKDVDVSDFTDFEGLDLLHLGS-NQITVIKGDVFHNLTNLRRLYLNGN 435
Query: 399 MNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPL 448
+++L ++F G NL+ + L+ N + + A F + + L L++N L
Sbjct: 436 Q-IERLYPEIFSGLHNLQYLYLEYNLIKEISAGTFDSMPNLQLLYLNNNLL 485
Score = 65 (27.9 bits), Expect = 1.2e-09, Sum P(3) = 1.2e-09
Identities = 27/99 (27%), Positives = 44/99 (44%)
Query: 350 NFSNIDSVAFKSLFSLKL-VKINLIPNLDSIDQRAFVDNIQLETVIINENMNLKQLPSKL 408
N ++ + K L + KL V N I ++D D F D L+ + + N + + +
Sbjct: 365 NIQSMSELIPKPLNAKKLHVNGNSIKDVDVSD---FTDFEGLDLLHLGSNQ-ITVIKGDV 420
Query: 409 FQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDN 446
F TNL+ + L GN + L F L + +L L N
Sbjct: 421 FHNLTNLRRLYLNGNQIERLYPEIFSGLHNLQYLYLEYN 459
Score = 60 (26.2 bits), Expect = 7.2e-05, Sum P(3) = 7.2e-05
Identities = 32/153 (20%), Positives = 58/153 (37%)
Query: 154 SFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVL 213
+F NI Y FS SL L NN++ ++ L +L L+LN N ++ +
Sbjct: 69 NFLNILYPNTFLNFSHAVSLH---LGNNKLQNIEGGAFLGL--SALKQLHLNNNELKILR 123
Query: 214 DNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALV 273
++F + NL L L L +P + + ++L
Sbjct: 124 ADTF-LGIENLEYLQADYNLIKYIERGAFNKLHKLKVLILNDNLISFLPDN-IFRFASLT 181
Query: 274 NLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN 306
+LD+ GN + + ++V++ L N
Sbjct: 182 HLDIRGNRIQKLPYIGVLEHIG-RVVELQLEDN 213
Score = 55 (24.4 bits), Expect = 1.2e-08, Sum P(3) = 1.2e-08
Identities = 14/53 (26%), Positives = 26/53 (49%)
Query: 397 ENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPL 448
+ N++ + S+L N K + + GNS+ ++ S F E + L L N +
Sbjct: 362 QEKNIQSM-SELIPKPLNAKKLHVNGNSIKDVDVSDFTDFEGLDLLHLGSNQI 413
Score = 54 (24.1 bits), Expect = 6.8e-14, Sum P(3) = 6.8e-14
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 507 IVLNNLKCSSPPDIKGLEVKAVPENSVHC 535
IV+ LKC +P +E+K++ +N + C
Sbjct: 553 IVVKELKCETPVQFANIELKSL-KNEILC 580
>RGD|70551 [details] [associations]
symbol:Lrrc15 "leucine rich repeat containing 15" species:10116
"Rattus norvegicus" [GO:0005622 "intracellular" evidence=IDA]
[GO:0007154 "cell communication" evidence=TAS] [GO:0016021 "integral
to membrane" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 RGD:70551 GO:GO:0016021 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005622
InterPro:IPR000372 SMART:SM00013 GO:GO:0007154 CTD:131578
HOVERGEN:HBG052343 EMBL:AB071036 IPI:IPI00201949 RefSeq:NP_659551.1
UniGene:Rn.213072 ProteinModelPortal:Q8R5M3 PRIDE:Q8R5M3
GeneID:246296 KEGG:rno:246296 UCSC:RGD:70551 NextBio:623686
Genevestigator:Q8R5M3 Uniprot:Q8R5M3
Length = 578
Score = 211 (79.3 bits), Expect = 7.2e-14, P = 7.2e-14
Identities = 96/383 (25%), Positives = 148/383 (38%)
Query: 78 SLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVI 137
SL + I L + F + L+ L + NE+S + F+ L L+ L L+ NK+ ++
Sbjct: 57 SLQVVNTHITELPENLFLNISALIALKMEKNELSTIMPGAFRNLGSLRYLSLANNKLRML 116
Query: 138 NKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQ 197
F+D +LE L+LS N + + ++ FS +LR L+L N + +P +L
Sbjct: 117 PIRVFQDVNNLESLLLSNNQLVQIQPAQ-FSQFSNLRELQLHGNNLESIPEEAFDHLV-- 173
Query: 198 SLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXX 257
L L L N + F L NL L L L L
Sbjct: 174 GLTKLNLGRNSFTHLSPRLFQH-LGNLQVLRLHENRLSDIPMGTFDALGNLQELALQENQ 232
Query: 258 XXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKI------NLIPNL-DSI 310
+ L L LS N+ S + F L L + + L P + +
Sbjct: 233 IGTLSPGLFHNNRNLQRLYLSNNHISQLPPGIFMQLPQLNKLTLFGNSLRELSPGVFGPM 292
Query: 311 DQXXXXXXXXXXXXXXXXXAFSLTPLGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKI 370
FS L L+ L LS N + I AF L +L+ ++
Sbjct: 293 PNLRELWLYNNHITSLADNTFS--HLNQLQV--LILSHNQLTYISPGAFNGLTNLR--EL 346
Query: 371 NLIPN-LDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLE 429
+L N L +D F L+ + + N L+QLP +F L ++ L+ N+L +L
Sbjct: 347 SLHTNALQDLDSNVFRSLANLQNISLQSN-RLRQLPGSIFANVNGLTTIQLQNNNLENLP 405
Query: 430 ASHFP-LERISFLDLSDNPLHCD 451
F L + L L DNP CD
Sbjct: 406 LGIFDHLVNLCELRLYDNPWRCD 428
Score = 201 (75.8 bits), Expect = 9.1e-13, P = 9.1e-13
Identities = 100/411 (24%), Positives = 163/411 (39%)
Query: 22 CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSFYIE-LRSLD 80
CPS C C + + CT A + +P L ++ + I+ + L I L +L
Sbjct: 25 CPSECTC-SRASQVECTGARIVAMPTPLPWNAMSLQVVNTHITELPENLFLNISALIALK 83
Query: 81 LSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKT 140
+ N+++ + F L L+++ N++ L F+ + L++L LS N++ I
Sbjct: 84 MEKNELSTIMPGAFRNLGSLRYLSLANNKLRMLPIRVFQDVNNLESLLLSNNQLVQIQPA 143
Query: 141 AFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLH 200
F +L L L NN+ + E F L L L L N + + +L + L
Sbjct: 144 QFSQFSNLRELQLHGNNLESIPE-EAFDHLVGLTKLNLGRNSFTHLSPRLFQHLGN--LQ 200
Query: 201 YLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXA 260
L L+EN + + +F L NL LAL R L
Sbjct: 201 VLRLHENRLSDIPMGTFD-ALGNLQELALQENQIGTLSPGLFHNNRNLQRLYLSNNHISQ 259
Query: 261 IPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKI--NLIPNL-DS----IDQX 313
+P +L L L L GN+ + F + +L+ + + N I +L D+ ++Q
Sbjct: 260 LPPGIFMQLPQLNKLTLFGNSLRELSPGVFGPMPNLRELWLYNNHITSLADNTFSHLNQL 319
Query: 314 XXXXXXXXXXXXXXXXAFSLTPLGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLI 373
AF+ G L L N ++DS F+SL +L+ I+L
Sbjct: 320 QVLILSHNQLTYISPGAFN----GLTNLRELSLHTNALQDLDSNVFRSLANLQ--NISLQ 373
Query: 374 PN-LDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGN 423
N L + F N+ T I +N NL+ LP +F NL + L N
Sbjct: 374 SNRLRQLPGSIFA-NVNGLTTIQLQNNNLENLPLGIFDHLVNLCELRLYDN 423
>MGI|MGI:1921738 [details] [associations]
symbol:Lrrc15 "leucine rich repeat containing 15"
species:10090 "Mus musculus" [GO:0005622 "intracellular"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:1921738 GO:GO:0016021
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00700000104286 CTD:131578 HOGENOM:HOG000040004
HOVERGEN:HBG052343 OMA:NHLEYIP OrthoDB:EOG4QVCCN EMBL:BC050245
IPI:IPI00330681 RefSeq:NP_083249.1 UniGene:Mm.290677
ProteinModelPortal:Q80X72 SMR:Q80X72 STRING:Q80X72
PhosphoSite:Q80X72 PRIDE:Q80X72 Ensembl:ENSMUST00000064606
GeneID:74488 KEGG:mmu:74488 UCSC:uc007ywn.2 InParanoid:Q80X72
NextBio:340930 Bgee:Q80X72 CleanEx:MM_LRRC15 Genevestigator:Q80X72
GermOnline:ENSMUSG00000052316 Uniprot:Q80X72
Length = 579
Score = 211 (79.3 bits), Expect = 7.2e-14, P = 7.2e-14
Identities = 105/410 (25%), Positives = 162/410 (39%)
Query: 61 NRISNVHYTLSFYIELRS-LDLSVNKINVLGSHNFEY-QNKLLN------LNISYNEISA 112
+R S V T + + + S L + + +L +H E ++K LN L + NE++
Sbjct: 32 SRASQVECTGAQIVAMPSPLPWNAMSLQILNTHITELPEDKFLNISALIALKMEKNELAN 91
Query: 113 LSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKS 172
+ F+ L L+ L L+ NK+ + F+D +LE L+LS N + + ++ FS +
Sbjct: 92 IMPGAFRNLGSLRHLSLANNKLKNLPVRLFQDVNNLETLLLSNNQLVQIQPAQ-FSQFSN 150
Query: 173 LRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXX 232
L+ L+L N + +P V +L L L L N + F L NL L L
Sbjct: 151 LKELQLYGNNLEYIPEGVFDHLV--GLTKLNLGNNGFTHLSPRVFQH-LGNLQVLRLYEN 207
Query: 233 XXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKS 292
L L + L L LS N+ S++ F
Sbjct: 208 RLSDIPMGTFDALGNLQELALQENQIGTLSPGLFHNNRNLQRLYLSNNHISHLPPGIFMQ 267
Query: 293 LFSLKLVKI--NLIPNLDS-----IDQXXXXXXXXXXXXXXXXXAFSLTPLGTLKCDRLD 345
L L + + N + L + AFS L L+ L
Sbjct: 268 LPHLNKLTLFGNSLKELSPGVFGPMPNLRELWLYNNHITSLPDNAFS--HLNQLQV--LI 323
Query: 346 LSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNLKQL 404
LS N S I AF L +L+ +++L N L +D F L V + N L+QL
Sbjct: 324 LSHNQLSYISPGAFNGLTNLR--ELSLHTNALQDLDGNVFRSLANLRNVSLQNN-RLRQL 380
Query: 405 PSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPLHCDCN 453
P +F L ++ L+ N+L +L F L + L L DNP CD N
Sbjct: 381 PGSIFANVNGLMTIQLQNNNLENLPLGIFDHLGNLCELRLYDNPWRCDSN 430
Score = 197 (74.4 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 98/410 (23%), Positives = 161/410 (39%)
Query: 22 CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSFYIE-LRSLD 80
CPS C C + + CT A + +P L ++ + I+ + I L +L
Sbjct: 25 CPSECTC-SRASQVECTGAQIVAMPSPLPWNAMSLQILNTHITELPEDKFLNISALIALK 83
Query: 81 LSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKT 140
+ N++ + F L +L+++ N++ L F+ + L+TL LS N++ I
Sbjct: 84 MEKNELANIMPGAFRNLGSLRHLSLANNKLKNLPVRLFQDVNNLETLLLSNNQLVQIQPA 143
Query: 141 AFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLH 200
F +L+ L L NN+ Y + +F L L L L NN + V +L + L
Sbjct: 144 QFSQFSNLKELQLYGNNLEYIPEG-VFDHLVGLTKLNLGNNGFTHLSPRVFQHLGN--LQ 200
Query: 201 YLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXA 260
L L EN + + +F L NL LAL R L
Sbjct: 201 VLRLYENRLSDIPMGTFD-ALGNLQELALQENQIGTLSPGLFHNNRNLQRLYLSNNHISH 259
Query: 261 IPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKI--NLIPNL-DS----IDQX 313
+P +L L L L GN+ + F + +L+ + + N I +L D+ ++Q
Sbjct: 260 LPPGIFMQLPHLNKLTLFGNSLKELSPGVFGPMPNLRELWLYNNHITSLPDNAFSHLNQL 319
Query: 314 XXXXXXXXXXXXXXXXAFSLTPLGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLI 373
AF+ G L L N ++D F+SL +L+ V +
Sbjct: 320 QVLILSHNQLSYISPGAFN----GLTNLRELSLHTNALQDLDGNVFRSLANLRNVSLQN- 374
Query: 374 PNLDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGN 423
L + F + L T+ + N NL+ LP +F NL + L N
Sbjct: 375 NRLRQLPGSIFANVNGLMTIQLQNN-NLENLPLGIFDHLGNLCELRLYDN 423
>UNIPROTKB|F1NWG8 [details] [associations]
symbol:F1NWG8 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0050808 "synapse organization" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00700000104056 OMA:IRQCSMI EMBL:AADN02035971
IPI:IPI00583715 Ensembl:ENSGALT00000003872 Uniprot:F1NWG8
Length = 520
Score = 210 (79.0 bits), Expect = 7.5e-14, P = 7.5e-14
Identities = 71/239 (29%), Positives = 114/239 (47%)
Query: 75 ELRSLDLSV--NKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYN 132
E SL LS+ N I L F ++L L++ +N+I+ + +D+F+GL +LK L LS N
Sbjct: 65 EKGSLGLSLRHNFITELERDQFASFSQLTWLHLDHNQIATVREDSFQGLYKLKELVLSSN 124
Query: 133 KISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLS 192
KI + T F L+L+ L LSFN ++ E+ L+ L+ L L +N + +P +
Sbjct: 125 KIFHLPNTTFSQLLNLQNLDLSFNQLSSLHP-ELLYGLRKLQTLHLRSNSLRTIPVRLFW 183
Query: 193 NLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXX 252
+ +SL +L L+ N + ++ N F L L L L + L +LH
Sbjct: 184 DC--RSLEFLDLSTNRLRSLARNGFA-GLIKLRELHLEHNQLTKINFAHFLRLSSLHTLF 240
Query: 253 XXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLK--LVKINLIPNLDS 309
+ L LDL+GN+ ID F+++ +LK L+ N + LDS
Sbjct: 241 LQWNKISNLTCGMEWTWGTLEKLDLTGNDIKAIDLTVFETMPNLKTLLLDNNKLSTLDS 299
Score = 210 (79.0 bits), Expect = 7.5e-14, P = 7.5e-14
Identities = 80/302 (26%), Positives = 128/302 (42%)
Query: 5 LTCIFLILALTKLNKAI---CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILREN 61
L ++ + + K+ A+ CP +C+C +KL C G VP + LR N
Sbjct: 19 LAALYAMSMVLKMLPALGMACPPKCRC--EKLLFYCDSQGFHSVPNTTEKGSLGLSLRHN 76
Query: 62 RISNVHYT-LSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKG 120
I+ + + + +L L L N+I + +F+ KL L +S N+I L TF
Sbjct: 77 FITELERDQFASFSQLTWLHLDHNQIATVREDSFQGLYKLKELVLSSNKIFHLPNTTFSQ 136
Query: 121 LKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDN 180
L L+ LDLS+N++S ++ L+ L L N++ +F +SL L L
Sbjct: 137 LLNLQNLDLSFNQLSSLHPELLYGLRKLQTLHLRSNSLRTIP-VRLFWDCRSLEFLDLST 195
Query: 181 NQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXX 240
N++ + N + L L L+L N + T ++ + L++LHTL L
Sbjct: 196 NRLRSLARNGFAGLI--KLRELHLEHNQL-TKINFAHFLRLSSLHTLFLQWNKISNLTCG 252
Query: 241 XXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVK 300
T TL AI + L L L N S +DS +SL SL V
Sbjct: 253 MEWTWGTLEKLDLTGNDIKAIDLTVFETMPNLKTLLLDNNKLSTLDSKILRSLPSLSTVG 312
Query: 301 IN 302
++
Sbjct: 313 LS 314
Score = 188 (71.2 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 70/225 (31%), Positives = 100/225 (44%)
Query: 58 LRENRISNVHYTLSFY--IELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSK 115
L N+I+ V SF +L+ L LS NKI L + F L NL++S+N++S+L
Sbjct: 97 LDHNQIATVRED-SFQGLYKLKELVLSSNKIFHLPNTTFSQLLNLQNLDLSFNQLSSLHP 155
Query: 116 DTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRI 175
+ GL++L+TL L N + I F D LE L LS N + + F+ L LR
Sbjct: 156 ELLYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEFLDLSTNRLRSLARNG-FAGLIKLRE 214
Query: 176 LKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXX 235
L L++NQ+ + N L SLH L+L N I L +T L L L
Sbjct: 215 LHLEHNQLTKI--NFAHFLRLSSLHTLFLQWNKISN-LTCGMEWTWGTLEKLDLTGNDIK 271
Query: 236 XXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGN 280
T+ L + +K L L +L + LSGN
Sbjct: 272 AIDLTVFETMPNLKTLLLDNNKLSTLDSKILRSLPSLSTVGLSGN 316
Score = 129 (50.5 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 69/256 (26%), Positives = 103/256 (40%)
Query: 151 LILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIE 210
L L N IT E + F+S L L LD+NQI V + L L L L+ N I
Sbjct: 71 LSLRHNFITELERDQ-FASFSQLTWLHLDHNQIATVREDSFQGL--YKLKELVLSSNKIF 127
Query: 211 TVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLS 270
+ + +F L NL L L LR L IP +
Sbjct: 128 HLPNTTFS-QLLNLQNLDLSFNQLSSLHPELLYGLRKLQTLHLRSNSLRTIPVRLFWDCR 186
Query: 271 ALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQXXXXXXXXXXXXXXXXX 329
+L LDLS N ++ F L +KL +++L N L I+
Sbjct: 187 SLEFLDLSTNRLRSLARNGFAGL--IKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWN 244
Query: 330 AFS-LT-----PLGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRA 383
S LT GTL ++LDL+GN+ ID F+++ +LK + ++ L ++D +
Sbjct: 245 KISNLTCGMEWTWGTL--EKLDLTGNDIKAIDLTVFETMPNLKTLLLDN-NKLSTLDSKI 301
Query: 384 FVDNIQLETVIINENM 399
L TV ++ N+
Sbjct: 302 LRSLPSLSTVGLSGNL 317
>MGI|MGI:106586 [details] [associations]
symbol:Omg "oligodendrocyte myelin glycoprotein"
species:10090 "Mus musculus" [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0022010 "central nervous system
myelination" evidence=ISO] [GO:0031102 "neuron projection
regeneration" evidence=IMP] [GO:0031225 "anchored to membrane"
evidence=IEA] [GO:0042802 "identical protein binding" evidence=IDA]
[GO:0042803 "protein homodimerization activity" evidence=ISO]
[GO:0043209 "myelin sheath" evidence=ISO] [GO:0048683 "regulation
of collateral sprouting of intact axon in response to injury"
evidence=IMP] InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:106586
GO:GO:0005886 GO:GO:0042803 GO:GO:0031225 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 GO:GO:0007155 GO:GO:0022010
GO:GO:0031102 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 GO:GO:0043209 CTD:4974
HOGENOM:HOG000115267 HOVERGEN:HBG007868 KO:K16666 GO:GO:0048683
EMBL:S67043 EMBL:BC024757 IPI:IPI00990035 PIR:A47530
RefSeq:NP_062282.2 UniGene:Mm.93335 ProteinModelPortal:Q63912
SMR:Q63912 IntAct:Q63912 STRING:Q63912 PhosphoSite:Q63912
PaxDb:Q63912 PRIDE:Q63912 GeneID:18377 KEGG:mmu:18377
InParanoid:Q63912 NextBio:293954 Bgee:Q63912 CleanEx:MM_OMG
Genevestigator:Q63912 GermOnline:ENSMUSG00000049612 Uniprot:Q63912
Length = 440
Score = 208 (78.3 bits), Expect = 8.3e-14, P = 8.3e-14
Identities = 65/226 (28%), Positives = 109/226 (48%)
Query: 6 TCIFLILALTKLNKAICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISN 65
+C+F++L LT ICP +C C ++ C+ L +P L + + L N ++
Sbjct: 10 SCLFILLFLTPGILCICPLQCTCTERHRHVDCSGRNLTTLPPGLQENIIHLNLSYNHFTD 69
Query: 66 VHYTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELK 125
+H L+ Y LR+LD+S N++ L + + L N++ + N I L K LK
Sbjct: 70 LHNQLTPYTNLRTLDISNNRLESLPA---QLPRSLWNMSAANNNIKLLDKSDTAYQWNLK 126
Query: 126 TLDLSYNKISVINKTAFRDTLH-LELLILSFNNITYFEDSEIFSSLKS-LRILKLDNNQI 183
LD+S N + + ++TL LE+L LS N + + +++ S L I+ L NN +
Sbjct: 127 YLDVSKNMLEKV--VLIKNTLRSLEVLNLSSNKLW-----TVPTNMPSKLHIVDLSNNSL 179
Query: 184 LDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLAL 229
+ L NL + L +LYL+ N + + SF L L + L
Sbjct: 180 TQILPGTLINLTN--LTHLYLHNNKFTFIPEQSFD-QLLQLQEITL 222
>UNIPROTKB|F1N5L8 [details] [associations]
symbol:SLITRK4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007409 "axonogenesis" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007409 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00680000099775 CTD:139065 OMA:TVFVAFC
EMBL:DAAA02067886 IPI:IPI00731735 RefSeq:XP_002699658.1
RefSeq:XP_609417.2 Ensembl:ENSBTAT00000015639 GeneID:530936
KEGG:bta:530936 NextBio:20875355 Uniprot:F1N5L8
Length = 837
Score = 148 (57.2 bits), Expect = 8.5e-14, Sum P(3) = 8.5e-14
Identities = 53/173 (30%), Positives = 81/173 (46%)
Query: 21 ICPSRCQCF--DQKLEASCTDAGLEVVPIQLNPEVQTII-LR-ENRISNVHYTLSF--YI 74
IC + C C + L +C + P QL P L +N N+ Y +F +
Sbjct: 26 IC-NVCSCVSVENVLYVNCEKVSV-YRPNQLKPPWSNFYHLNFQNNFLNILYPNTFLNFS 83
Query: 75 ELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKI 134
SL L NK+ + F + L L+++ NE+ L DTF G++ L+ L YN I
Sbjct: 84 HAVSLQLGNNKLQNIEGGAFLGLSALKQLHLNNNELKILRADTFLGIENLEYLQADYNLI 143
Query: 135 SVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVP 187
I + AF L++LIL+ N I++ D+ IF SL L + N+I +P
Sbjct: 144 KYIERGAFNKLHKLKVLILNDNLISFLPDN-IFR-FASLTHLDIRGNRIQKLP 194
Score = 139 (54.0 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 59/198 (29%), Positives = 88/198 (44%)
Query: 22 CPSRCQC----FDQKLEASCTDAGL----EVVPIQLNPEVQTIILRENRISNVHYTLSFY 73
CP+ C C D L +C + + E++P N + + + N I +V +S +
Sbjct: 342 CPAPCFCKTHPSDLGLSVNCQEKNIQSMSELIPKPSN--AKKLHVNGNSIKDVD--ISDF 397
Query: 74 IELRSLDL---SVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLS 130
E LDL N+I + F L L ++ N+I L + F GL L+ L L
Sbjct: 398 TEFEGLDLLHLGSNQITAIKGDVFRNLTNLRRLYLNGNQIERLYPEMFSGLHNLQYLYLE 457
Query: 131 YNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVP-NN 189
YN I I F +L+LL L+ NN+ IFS R L L NN+ + +P +
Sbjct: 458 YNLIKEILAGTFDSMPNLQLLYLN-NNLLKSLPVYIFSGAPLAR-LNLRNNKFMYLPVSG 515
Query: 190 VLSNLPHQSLHYLYLNEN 207
VL L Q+L + L N
Sbjct: 516 VLDQL--QALTQIDLEGN 531
Score = 136 (52.9 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 61/204 (29%), Positives = 93/204 (45%)
Query: 101 LNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITY 160
L++N I ++S+ K K L ++ N I ++ + F + L+LL L N IT
Sbjct: 357 LSVNCQEKNIQSMSELIPKP-SNAKKLHVNGNSIKDVDISDFTEFEGLDLLHLGSNQITA 415
Query: 161 FEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFT 220
+ ++F +L +LR L L+ NQI + + S L H +L YLYL NLI+ +L +F +
Sbjct: 416 IK-GDVFRNLTNLRRLYLNGNQIERLYPEMFSGL-H-NLQYLYLEYNLIKEILAGTFD-S 471
Query: 221 LTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQ-LSKLSALVNLDLSG 279
+ NL L L + L +P L +L AL +DL G
Sbjct: 472 MPNLQLLYLNNNLLKSLPVYIF-SGAPLARLNLRNNKFMYLPVSGVLDQLQALTQIDLEG 530
Query: 280 NNFS-NIDSVAFKSLFSLKLVKIN 302
N + D VA K L L K+N
Sbjct: 531 NPWDCTCDLVALK----LWLEKLN 550
Score = 132 (51.5 bits), Expect = 4.7e-12, Sum P(3) = 4.7e-12
Identities = 37/132 (28%), Positives = 66/132 (50%)
Query: 79 LDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVIN 138
L+ N +N+L + F + ++L + N++ + F GL LK L L+ N++ ++
Sbjct: 64 LNFQNNFLNILYPNTFLNFSHAVSLQLGNNKLQNIEGGAFLGLSALKQLHLNNNELKILR 123
Query: 139 KTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQS 198
F +LE L +N I Y E F+ L L++L L++N I +P+N+ S
Sbjct: 124 ADTFLGIENLEYLQADYNLIKYIERGA-FNKLHKLKVLILNDNLISFLPDNIFR---FAS 179
Query: 199 LHYLYLNENLIE 210
L +L + N I+
Sbjct: 180 LTHLDIRGNRIQ 191
Score = 119 (46.9 bits), Expect = 1.2e-10, Sum P(3) = 1.2e-10
Identities = 39/124 (31%), Positives = 61/124 (49%)
Query: 102 NLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYF 161
+LN N ++ L +TF +L L NK+ I AF L+ L L+ N +
Sbjct: 63 HLNFQNNFLNILYPNTFLNFSHAVSLQLGNNKLQNIEGGAFLGLSALKQLHLNNNELKIL 122
Query: 162 EDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPF-T 220
++ F +++L L+ D N I + + L H+ L L LN+NLI + DN F F +
Sbjct: 123 R-ADTFLGIENLEYLQADYNLIKYIERGAFNKL-HK-LKVLILNDNLISFLPDNIFRFAS 179
Query: 221 LTNL 224
LT+L
Sbjct: 180 LTHL 183
Score = 104 (41.7 bits), Expect = 8.5e-14, Sum P(3) = 8.5e-14
Identities = 35/117 (29%), Positives = 58/117 (49%)
Query: 343 RLDLSGNNFSNIDSVAFKSLFSLKLVKI--NLIPNL--DSIDQRAFVDNIQLETVIINEN 398
RL L+GN + F L +L+ + + NLI + + D + N+QL + +N N
Sbjct: 429 RLYLNGNQIERLYPEMFSGLHNLQYLYLEYNLIKEILAGTFDS---MPNLQL--LYLNNN 483
Query: 399 MNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHF--PLERISFLDLSDNPLHCDCN 453
+ LK LP +F G L ++L+ N +L S L+ ++ +DL NP C C+
Sbjct: 484 L-LKSLPVYIFSG-APLARLNLRNNKFMYLPVSGVLDQLQALTQIDLEGNPWDCTCD 538
Score = 73 (30.8 bits), Expect = 1.2e-10, Sum P(3) = 1.2e-10
Identities = 25/107 (23%), Positives = 52/107 (48%)
Query: 343 RLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFVDNIQLETVIINENMNLK 402
+L ++GN+ ++D F L L+ + + +I F + L + +N N ++
Sbjct: 381 KLHVNGNSIKDVDISDFTEFEGLDLLHLGS-NQITAIKGDVFRNLTNLRRLYLNGNQ-IE 438
Query: 403 QLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPL 448
+L ++F G NL+ + L+ N + + A F + + L L++N L
Sbjct: 439 RLYPEMFSGLHNLQYLYLEYNLIKEILAGTFDSMPNLQLLYLNNNLL 485
Score = 61 (26.5 bits), Expect = 9.5e-05, Sum P(3) = 9.5e-05
Identities = 32/153 (20%), Positives = 59/153 (38%)
Query: 154 SFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVL 213
+F NI Y FS SL+ L NN++ ++ L +L L+LN N ++ +
Sbjct: 69 NFLNILYPNTFLNFSHAVSLQ---LGNNKLQNIEGGAFLGL--SALKQLHLNNNELKILR 123
Query: 214 DNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALV 273
++F + NL L L L +P + + ++L
Sbjct: 124 ADTF-LGIENLEYLQADYNLIKYIERGAFNKLHKLKVLILNDNLISFLPDN-IFRFASLT 181
Query: 274 NLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN 306
+LD+ GN + + ++V++ L N
Sbjct: 182 HLDIRGNRIQKLPYIGVLEHIG-RVVELQLEDN 213
Score = 58 (25.5 bits), Expect = 3.8e-09, Sum P(3) = 3.8e-09
Identities = 25/99 (25%), Positives = 44/99 (44%)
Query: 350 NFSNIDSVAFKSLFSLKL-VKINLIPNLDSIDQRAFVDNIQLETVIINENMNLKQLPSKL 408
N ++ + K + KL V N I ++D D F + L+ + + N + + +
Sbjct: 365 NIQSMSELIPKPSNAKKLHVNGNSIKDVDISD---FTEFEGLDLLHLGSNQ-ITAIKGDV 420
Query: 409 FQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDN 446
F+ TNL+ + L GN + L F L + +L L N
Sbjct: 421 FRNLTNLRRLYLNGNQIERLYPEMFSGLHNLQYLYLEYN 459
Score = 56 (24.8 bits), Expect = 6.1e-09, Sum P(3) = 6.1e-09
Identities = 14/53 (26%), Positives = 27/53 (50%)
Query: 397 ENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPL 448
+ N++ + S+L +N K + + GNS+ ++ S F E + L L N +
Sbjct: 362 QEKNIQSM-SELIPKPSNAKKLHVNGNSIKDVDISDFTEFEGLDLLHLGSNQI 413
Score = 55 (24.4 bits), Expect = 8.5e-14, Sum P(3) = 8.5e-14
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 507 IVLNNLKCSSPPDIKGLEVKAVPENSVHC 535
IV+ LKC +P +E+K++ +N + C
Sbjct: 553 IVMKELKCETPVQFANIELKSL-KNEILC 580
>UNIPROTKB|F1NEL3 [details] [associations]
symbol:LGR4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016500 "protein-hormone receptor activity" evidence=IEA]
[GO:0030539 "male genitalia development" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0050673 "epithelial cell proliferation"
evidence=IEA] [GO:0061290 "canonical Wnt receptor signaling pathway
involved in metanephric kidney development" evidence=IEA]
[GO:0072202 "cell differentiation involved in metanephros
development" evidence=IEA] [GO:0072224 "metanephric glomerulus
development" evidence=IEA] [GO:0072282 "metanephric nephron tubule
morphogenesis" evidence=IEA] [GO:0090190 "positive regulation of
branching involved in ureteric bud morphogenesis" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 GO:GO:0045892
GO:GO:0045893 InterPro:IPR003591 SMART:SM00369 GO:GO:0090190
GO:GO:0050673 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0016500 GeneTree:ENSGT00650000092962 OMA:DGYWSDC
EMBL:AADN02040116 EMBL:AADN02040117 EMBL:AADN02040118
EMBL:AADN02040119 IPI:IPI00595681 ProteinModelPortal:F1NEL3
Ensembl:ENSGALT00000019904 Uniprot:F1NEL3
Length = 1038
Score = 214 (80.4 bits), Expect = 8.8e-14, P = 8.8e-14
Identities = 104/379 (27%), Positives = 163/379 (43%)
Query: 77 RSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISV 136
++LD+S+N I L F+ L L ++ N++S + GLKELK L L N++
Sbjct: 143 QALDVSMNNITRLPEDAFKNFPYLEELRLAGNDLSFIHPKALSGLKELKVLTLQNNQLKT 202
Query: 137 INKTAFRDTLHLELLILSFNNITYF-EDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLP 195
+ A R L+ L L N+IT +DS F L LR L LD+N + +VP + LSNLP
Sbjct: 203 VPNEAIRGLSGLQSLRLDANHITAVPKDS--FEGLVQLRHLWLDDNSLTEVPIHPLSNLP 260
Query: 196 HQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXX 255
SL L L N I + D +F L++L L L L L
Sbjct: 261 --SLQALTLALNKITHIPDYAFT-NLSSLVVLHLHNNKIKTIGKHCFDGLDNLETLDLNY 317
Query: 256 XXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKI--NLIPNL-DSIDQ 312
P + + L L L N S I AF L+++ + N + + +S Q
Sbjct: 318 NNMVEFP-EAIKALPNLKELAFHSNYISIIPDGAFAGNPLLRMIHLYDNPLSFVGNSAFQ 376
Query: 313 XXXXXXXXXXXXXXXXXAF-SLTPLGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKIN 371
F +LT GT+ + L L+G + I+S+ K+++
Sbjct: 377 NLSDLHSLVIRGASMVQRFPNLT--GTVNLESLTLTG---TKINSIPVNLCQEQKMLR-T 430
Query: 372 LIPNLDSI-DQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEA 430
L + ++I D +F LE + + N + ++ FQG ++L+ + L N + +
Sbjct: 431 LDLSYNNIKDLPSFTGCRSLEEISLQHNQ-IHEITDDTFQGLSSLRILDLSRNRICKIHK 489
Query: 431 SHFP-LERISFLDLSDNPL 448
F + I LDLS N L
Sbjct: 490 EAFTTIGAIVNLDLSFNEL 508
Score = 210 (79.0 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 107/414 (25%), Positives = 174/414 (42%)
Query: 20 AICPSRCQCFDQKLEASCTD-AGLEVVPIQLNPEVQTIILRENRISNVH-YTLSFYIELR 77
A P F Q L+ S + L + P ++ + L N +S +H LS EL+
Sbjct: 132 AAVPPGLSAFTQALDVSMNNITRLPEDAFKNFPYLEELRLAGNDLSFIHPKALSGLKELK 191
Query: 78 SLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVI 137
L L N++ + + + L +L + N I+A+ KD+F+GL +L+ L L N ++ +
Sbjct: 192 VLTLQNNQLKTVPNEAIRGLSGLQSLRLDANHITAVPKDSFEGLVQLRHLWLDDNSLTEV 251
Query: 138 NKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQ 197
+ L+ L L+ N IT+ D F++L SL +L L NN+I + + L
Sbjct: 252 PIHPLSNLPSLQALTLALNKITHIPDYA-FTNLSSLVVLHLHNNKIKTIGKHCFDGL--D 308
Query: 198 SLHYLYLN-ENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXV---TLRTLHXXXX 253
+L L LN N++E + L NL LA LR +H
Sbjct: 309 NLETLDLNYNNMVE--FPEAIK-ALPNLKELAFHSNYISIIPDGAFAGNPLLRMIHLYDN 365
Query: 254 XXXXXXAIPTKQLSKLSALVNLDLSG-NNFSNID-SVAFKSLFSLKLVKINLIP-NLDSI 310
+ LS L +LV S F N+ +V +SL +L KIN IP NL
Sbjct: 366 PLSFVGNSAFQNLSDLHSLVIRGASMVQRFPNLTGTVNLESL-TLTGTKINSIPVNLCQ- 423
Query: 311 DQXXXXXXXXXXXXXXXXXAFSLTPLGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKI 370
+Q +F+ G + + L N I F+ L SL+++ +
Sbjct: 424 EQKMLRTLDLSYNNIKDLPSFT----GCRSLEEISLQHNQIHEITDDTFQGLSSLRILDL 479
Query: 371 NLIPNLDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNS 424
+ + I + AF I I+N +++ +L S +G + L + L GNS
Sbjct: 480 SR-NRICKIHKEAFT-TIG---AIVNLDLSFNELTSVPTEGLSGLNQLKLAGNS 528
>UNIPROTKB|E9PGH4 [details] [associations]
symbol:TLR3 "Toll-like receptor 3" species:9606 "Homo
sapiens" [GO:0002756 "MyD88-independent toll-like receptor
signaling pathway" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004888 "transmembrane signaling
receptor activity" evidence=IEA] [GO:0032722 "positive regulation
of chemokine production" evidence=IEA] [GO:0034138 "toll-like
receptor 3 signaling pathway" evidence=IEA] [GO:0045087 "innate
immune response" evidence=IEA] [GO:0050729 "positive regulation of
inflammatory response" evidence=IEA] [GO:0051607 "defense response
to virus" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0032728 "positive regulation of interferon-beta
production" evidence=IEA] [GO:0032735 "positive regulation of
interleukin-12 production" evidence=IEA] [GO:0032755 "positive
regulation of interleukin-6 production" evidence=IEA] [GO:0032760
"positive regulation of tumor necrosis factor production"
evidence=IEA] [GO:0034346 "positive regulation of type III
interferon production" evidence=IEA] [GO:0043123 "positive
regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0043330 "response to exogenous dsRNA" evidence=IEA] [GO:0045080
"positive regulation of chemokine biosynthetic process"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0046330
"positive regulation of JNK cascade" evidence=IEA] [GO:0051092
"positive regulation of NF-kappaB transcription factor activity"
evidence=IEA] InterPro:IPR000157 InterPro:IPR001611
InterPro:IPR027173 Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450
SMART:SM00255 GO:GO:0016021 GO:GO:0009986 GO:GO:0043123
GO:GO:0046330 GO:GO:0045944 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0032755 GO:GO:0004872
GO:GO:0005622 GO:GO:0009615 GO:GO:0008584 GO:GO:0043065
GO:GO:0035690 GO:GO:0003725 GO:GO:0051092 GO:GO:0001934
GO:GO:0071346 GO:GO:0035458 GO:GO:0032760 GO:GO:0002224
GO:GO:0052033 GO:GO:0032735 GO:GO:0002282 GO:GO:0032728
GO:GO:0045080 SUPFAM:SSF52200 GO:GO:0071360 PANTHER:PTHR24365:SF5
HGNC:HGNC:11849 GO:GO:0034346 EMBL:AC104070 IPI:IPI00966006
ProteinModelPortal:E9PGH4 SMR:E9PGH4 Ensembl:ENST00000504367
ArrayExpress:E9PGH4 Bgee:E9PGH4 Uniprot:E9PGH4
Length = 627
Score = 156 (60.0 bits), Expect = 8.9e-08, P = 8.9e-08
Identities = 70/248 (28%), Positives = 104/248 (41%)
Query: 76 LRSLDLSVNKINVLGSHNFE--YQNKLLNLNISYNEISALSKDTFKGLKE--LKTLDLSY 131
L L++ N I + S+ F K L+L+ S+ + L+ +TF L L L+L+
Sbjct: 80 LEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTK 139
Query: 132 NKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVL 191
NKIS I AF HLE+L L N I + + L+++ + L N+ L + N
Sbjct: 140 NKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSF 199
Query: 192 SNLPHQSLHYLYLNENLIETVLDNSFPFT-LTNLHTLALXXXXXXXXXXXXXVTLRTLHX 250
+ +P SL L L ++ V + PF L NL L L L L
Sbjct: 200 ALVP--SLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEI 257
Query: 251 XXXXXXXXXAI--------PTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
+ P L LS L L+L N F I FK LF LK++ +
Sbjct: 258 LDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLG 317
Query: 303 LIPNLDSI 310
L NL+++
Sbjct: 318 L-NNLNTL 324
Score = 141 (54.7 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 49/162 (30%), Positives = 82/162 (50%)
Query: 79 LDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDL--SYNKISV 136
LDLS N +NV+G+ +F + +L + YN I L + GL ++ L+L S+ K S+
Sbjct: 2 LDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSI 61
Query: 137 -------INKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNN--QILDVP 187
I+ +F+ LE L + N+I + S +F+ L +L+ L L N+ + +
Sbjct: 62 SLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIK-SNMFTGLINLKYLSLSNSFTSLRTLT 120
Query: 188 NNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLAL 229
N +L H LH L L +N I + ++F + L +L L L
Sbjct: 121 NETFVSLAHSPLHILNLTKNKISKIESDAFSW-LGHLEVLDL 161
Score = 140 (54.3 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 58/241 (24%), Positives = 105/241 (43%)
Query: 63 ISNVHYTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISA-LSKDTFKGL 121
++N + + L L+L+ NKI+ + S F + L L++ NEI L+ ++GL
Sbjct: 119 LTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGL 178
Query: 122 KELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEI-FSSLKSLRILKLDN 180
+ + + LSYNK + + +F L+ L+L + + S F L++L IL L N
Sbjct: 179 ENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSN 238
Query: 181 NQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFP-----FT--LTNLHTLALXXXX 233
N I ++ +++L L + L L L N + + ++ P F L++LH L L
Sbjct: 239 NNIANINDDMLEGL--EKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNG 296
Query: 234 XXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSL 293
L L +P + +L +L+L N ++++ F
Sbjct: 297 FDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPA 356
Query: 294 F 294
F
Sbjct: 357 F 357
Score = 124 (48.7 bits), Expect = 0.00027, P = 0.00027
Identities = 43/142 (30%), Positives = 68/142 (47%)
Query: 94 FEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTA--------FRDT 145
F+ L L++S N I+ ++ D +GL++L+ LDL +N ++ + K A +
Sbjct: 225 FQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGL 284
Query: 146 LHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLN 205
HL +L L N E+F L L+I+ L N + +P +V +N SL L L
Sbjct: 285 SHLHILNLESNGFDEIP-VEVFKDLFELKIIDLGLNNLNTLPASVFNN--QVSLKSLNLQ 341
Query: 206 ENLIETVLDNSFPFTLTNLHTL 227
+NLI +V F NL L
Sbjct: 342 KNLITSVEKKVFGPAFRNLTEL 363
Score = 118 (46.6 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 40/125 (32%), Positives = 62/125 (49%)
Query: 337 GTLKCDRLDLSGNNFSNIDSVAFKS--LFSLK----LVKINLIPN-LDSIDQRAFVDNIQ 389
G K + LDL NN + + A ++ LK L +NL N D I F D +
Sbjct: 251 GLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFE 310
Query: 390 LETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHF-PLER-ISFLDLSDNP 447
L+ + + N NL LP+ +F +LKS++L+ N ++ +E F P R ++ LD+ NP
Sbjct: 311 LKIIDLGLN-NLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNP 369
Query: 448 LHCDC 452
C C
Sbjct: 370 FDCTC 374
>RGD|1588563 [details] [associations]
symbol:Slitrk4 "SLIT and NTRK-like family, member 4"
species:10116 "Rattus norvegicus" [GO:0007409 "axonogenesis"
evidence=ISO] REFSEQ:NM_001106947 Ncbi:NP_001100417
Length = 836
Score = 150 (57.9 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 64/204 (31%), Positives = 95/204 (46%)
Query: 101 LNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITY 160
L++N I ++S+ T K L K L ++ N I ++ + F + L+LL L N IT
Sbjct: 357 LSVNCQEKNIQSMSELTPKPLNA-KKLHVNGNNIKDVDISDFTEFEGLDLLHLGSNQITA 415
Query: 161 FEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFT 220
+ E+F +L +LR L L+ NQI + + S L H +L YLYL NLI+ +L +F +
Sbjct: 416 IK-GEVFHNLTNLRRLYLNGNQIERLYPEIFSGL-H-NLQYLYLEYNLIKEILAGTFD-S 471
Query: 221 LTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQ-LSKLSALVNLDLSG 279
L NL L L + L +P L +L +L +DL G
Sbjct: 472 LPNLQLLYLNNNLLKSLPVYIF-SGAPLARLNLRNNKFMYLPVSGVLDQLQSLTQIDLEG 530
Query: 280 NNFS-NIDSVAFKSLFSLKLVKIN 302
N + D VA K L L K+N
Sbjct: 531 NPWDCTCDLVALK----LWLEKLN 550
Score = 147 (56.8 bits), Expect = 1.4e-13, Sum P(3) = 1.4e-13
Identities = 53/173 (30%), Positives = 81/173 (46%)
Query: 21 ICPSRCQCF--DQKLEASCTDAGLEVVPIQLNPEVQTII-LR-ENRISNVHYTLSF--YI 74
IC + C C + L +C + P QL P L +N N+ Y +F +
Sbjct: 26 IC-NVCSCVSVENVLYVNCEKVSV-YRPNQLKPPWSNFYHLNFQNNFLNILYPNTFVNFS 83
Query: 75 ELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKI 134
SL L NK+ + F + L L+++ NE+ L DTF G++ L+ L YN I
Sbjct: 84 HAVSLHLGNNKLQNIEGGAFLGLSALKQLHLNNNELKILRADTFLGIENLEYLQADYNLI 143
Query: 135 SVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVP 187
I + AF L++LIL+ N I++ D+ IF SL L + N+I +P
Sbjct: 144 KYIERGAFNKLHKLKVLILNDNLISFLPDN-IFR-FASLTHLDIRGNRIQKLP 194
Score = 147 (56.8 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 61/198 (30%), Positives = 88/198 (44%)
Query: 22 CPSRCQC----FDQKLEASCTDAGL----EVVPIQLNPEVQTIILRENRISNVHYTLSFY 73
CP+ C C D L +C + + E+ P LN + + + N I +V +S +
Sbjct: 342 CPAPCFCKTHPSDLGLSVNCQEKNIQSMSELTPKPLN--AKKLHVNGNNIKDVD--ISDF 397
Query: 74 IELRSLDL---SVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLS 130
E LDL N+I + F L L ++ N+I L + F GL L+ L L
Sbjct: 398 TEFEGLDLLHLGSNQITAIKGEVFHNLTNLRRLYLNGNQIERLYPEIFSGLHNLQYLYLE 457
Query: 131 YNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVP-NN 189
YN I I F +L+LL L+ NN+ IFS R L L NN+ + +P +
Sbjct: 458 YNLIKEILAGTFDSLPNLQLLYLN-NNLLKSLPVYIFSGAPLAR-LNLRNNKFMYLPVSG 515
Query: 190 VLSNLPHQSLHYLYLNEN 207
VL L QSL + L N
Sbjct: 516 VLDQL--QSLTQIDLEGN 531
Score = 134 (52.2 bits), Expect = 3.6e-12, Sum P(3) = 3.6e-12
Identities = 37/132 (28%), Positives = 67/132 (50%)
Query: 79 LDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVIN 138
L+ N +N+L + F + ++L++ N++ + F GL LK L L+ N++ ++
Sbjct: 64 LNFQNNFLNILYPNTFVNFSHAVSLHLGNNKLQNIEGGAFLGLSALKQLHLNNNELKILR 123
Query: 139 KTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQS 198
F +LE L +N I Y E F+ L L++L L++N I +P+N+ S
Sbjct: 124 ADTFLGIENLEYLQADYNLIKYIERGA-FNKLHKLKVLILNDNLISFLPDNIFR---FAS 179
Query: 199 LHYLYLNENLIE 210
L +L + N I+
Sbjct: 180 LTHLDIRGNRIQ 191
Score = 118 (46.6 bits), Expect = 1.9e-10, Sum P(3) = 1.9e-10
Identities = 39/124 (31%), Positives = 61/124 (49%)
Query: 102 NLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYF 161
+LN N ++ L +TF +L L NK+ I AF L+ L L+ N +
Sbjct: 63 HLNFQNNFLNILYPNTFVNFSHAVSLHLGNNKLQNIEGGAFLGLSALKQLHLNNNELKIL 122
Query: 162 EDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPF-T 220
++ F +++L L+ D N I + + L H+ L L LN+NLI + DN F F +
Sbjct: 123 R-ADTFLGIENLEYLQADYNLIKYIERGAFNKL-HK-LKVLILNDNLISFLPDNIFRFAS 179
Query: 221 LTNL 224
LT+L
Sbjct: 180 LTHL 183
Score = 104 (41.7 bits), Expect = 1.4e-13, Sum P(3) = 1.4e-13
Identities = 35/117 (29%), Positives = 58/117 (49%)
Query: 343 RLDLSGNNFSNIDSVAFKSLFSLKLVKI--NLIPNL--DSIDQRAFVDNIQLETVIINEN 398
RL L+GN + F L +L+ + + NLI + + D + N+QL + +N N
Sbjct: 429 RLYLNGNQIERLYPEIFSGLHNLQYLYLEYNLIKEILAGTFDS---LPNLQL--LYLNNN 483
Query: 399 MNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHF--PLERISFLDLSDNPLHCDCN 453
+ LK LP +F G L ++L+ N +L S L+ ++ +DL NP C C+
Sbjct: 484 L-LKSLPVYIFSG-APLARLNLRNNKFMYLPVSGVLDQLQSLTQIDLEGNPWDCTCD 538
Score = 89 (36.4 bits), Expect = 4.6e-12, Sum P(3) = 4.6e-12
Identities = 31/117 (26%), Positives = 56/117 (47%)
Query: 333 LTPLGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFVDNIQLET 392
LTP L +L ++GNN ++D F L L+ + + +I F + L
Sbjct: 372 LTPK-PLNAKKLHVNGNNIKDVDISDFTEFEGLDLLHLGS-NQITAIKGEVFHNLTNLRR 429
Query: 393 VIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPL 448
+ +N N +++L ++F G NL+ + L+ N + + A F L + L L++N L
Sbjct: 430 LYLNGNQ-IERLYPEIFSGLHNLQYLYLEYNLIKEILAGTFDSLPNLQLLYLNNNLL 485
Score = 65 (27.9 bits), Expect = 1.2e-09, Sum P(3) = 1.2e-09
Identities = 27/106 (25%), Positives = 48/106 (45%)
Query: 344 LDLSGN-NFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNL 401
L LS N NI S++ + L K+++ N + +D F + L+ + + N +
Sbjct: 355 LGLSVNCQEKNIQSMSELTPKPLNAKKLHVNGNNIKDVDISDFTEFEGLDLLHLGSNQ-I 413
Query: 402 KQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDN 446
+ ++F TNL+ + L GN + L F L + +L L N
Sbjct: 414 TAIKGEVFHNLTNLRRLYLNGNQIERLYPEIFSGLHNLQYLYLEYN 459
Score = 61 (26.5 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 32/153 (20%), Positives = 58/153 (37%)
Query: 154 SFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVL 213
+F NI Y FS SL L NN++ ++ L +L L+LN N ++ +
Sbjct: 69 NFLNILYPNTFVNFSHAVSLH---LGNNKLQNIEGGAFLGL--SALKQLHLNNNELKILR 123
Query: 214 DNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALV 273
++F + NL L L L +P + + ++L
Sbjct: 124 ADTF-LGIENLEYLQADYNLIKYIERGAFNKLHKLKVLILNDNLISFLPDN-IFRFASLT 181
Query: 274 NLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN 306
+LD+ GN + + ++V++ L N
Sbjct: 182 HLDIRGNRIQKLPYIGVLEHIG-RVVELQLEDN 213
Score = 54 (24.1 bits), Expect = 1.4e-13, Sum P(3) = 1.4e-13
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 507 IVLNNLKCSSPPDIKGLEVKAVPENSVHC 535
IV+ LKC +P +E+K++ +N + C
Sbjct: 553 IVVKELKCETPVQFANIELKSL-KNEILC 580
>MGI|MGI:2442509 [details] [associations]
symbol:Slitrk4 "SLIT and NTRK-like family, member 4"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0007409 "axonogenesis" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=ISS] InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:2442509
GO:GO:0016021 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007409 InterPro:IPR000372
SMART:SM00013 HOGENOM:HOG000290667 HOVERGEN:HBG056407
GeneTree:ENSGT00680000099775 CTD:139065 OrthoDB:EOG4VHK5S
EMBL:AB097573 EMBL:AK032263 EMBL:AK039763 EMBL:AK053065
IPI:IPI00396668 RefSeq:NP_848855.2 UniGene:Mm.101707
ProteinModelPortal:Q810B8 SMR:Q810B8 PhosphoSite:Q810B8
PaxDb:Q810B8 PRIDE:Q810B8 Ensembl:ENSMUST00000069926
Ensembl:ENSMUST00000114679 GeneID:245446 KEGG:mmu:245446
InParanoid:Q810B8 ChiTaRS:SLITRK4 NextBio:386707 Bgee:Q810B8
CleanEx:MM_SLITRK4 Genevestigator:Q810B8
GermOnline:ENSMUSG00000046699 Uniprot:Q810B8
Length = 837
Score = 149 (57.5 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 63/204 (30%), Positives = 95/204 (46%)
Query: 101 LNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITY 160
L++N I ++S+ T K L K L ++ N I ++ + F + L+LL L N IT
Sbjct: 357 LSVNCQEKNIQSMSELTPKPLNA-KKLHVNGNNIKDVDISDFTEFEGLDLLHLGSNQITL 415
Query: 161 FEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFT 220
+ E+F +L +LR L L+ NQI + + S L H +L YLYL NLI+ +L +F +
Sbjct: 416 IK-GEVFHNLTNLRRLYLNGNQIERLYPEIFSGL-H-NLQYLYLEYNLIKEILAGTFD-S 471
Query: 221 LTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQ-LSKLSALVNLDLSG 279
+ NL L L + L +P L +L +L +DL G
Sbjct: 472 MPNLQLLYLNNNLLKSLPVYIF-SGAPLARLNLRNNKFMYLPVSGVLDQLQSLTQIDLEG 530
Query: 280 NNFS-NIDSVAFKSLFSLKLVKIN 302
N + D VA K L L K+N
Sbjct: 531 NPWDCTCDLVALK----LWLEKLN 550
Score = 147 (56.8 bits), Expect = 1.4e-13, Sum P(3) = 1.4e-13
Identities = 53/173 (30%), Positives = 81/173 (46%)
Query: 21 ICPSRCQCF--DQKLEASCTDAGLEVVPIQLNPEVQTII-LR-ENRISNVHYTLSF--YI 74
IC + C C + L +C + P QL P L +N N+ Y +F +
Sbjct: 26 IC-NVCSCVSVENVLYVNCEKVSV-YRPNQLKPPWSNFYHLNFQNNFLNILYPNTFVNFS 83
Query: 75 ELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKI 134
SL L NK+ + F + L L+++ NE+ L DTF G++ L+ L YN I
Sbjct: 84 HAVSLHLGNNKLQNIEGGAFLGLSALKQLHLNNNELKILRADTFLGIENLEYLQADYNLI 143
Query: 135 SVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVP 187
I + AF L++LIL+ N I++ D+ IF SL L + N+I +P
Sbjct: 144 KYIERGAFNKLHKLKVLILNDNLISFLPDN-IFR-FASLTHLDIRGNRIQKLP 194
Score = 145 (56.1 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 61/198 (30%), Positives = 88/198 (44%)
Query: 22 CPSRCQC----FDQKLEASCTDAGL----EVVPIQLNPEVQTIILRENRISNVHYTLSFY 73
CP C C D L +C + + E+ P LN + + + N I +V +S +
Sbjct: 342 CPVPCFCKTHPSDLGLSVNCQEKNIQSMSELTPKPLN--AKKLHVNGNNIKDVD--ISDF 397
Query: 74 IELRSLDL---SVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLS 130
E LDL N+I ++ F L L ++ N+I L + F GL L+ L L
Sbjct: 398 TEFEGLDLLHLGSNQITLIKGEVFHNLTNLRRLYLNGNQIERLYPEIFSGLHNLQYLYLE 457
Query: 131 YNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVP-NN 189
YN I I F +L+LL L+ NN+ IFS R L L NN+ + +P +
Sbjct: 458 YNLIKEILAGTFDSMPNLQLLYLN-NNLLKSLPVYIFSGAPLAR-LNLRNNKFMYLPVSG 515
Query: 190 VLSNLPHQSLHYLYLNEN 207
VL L QSL + L N
Sbjct: 516 VLDQL--QSLTQIDLEGN 531
Score = 134 (52.2 bits), Expect = 3.6e-12, Sum P(3) = 3.6e-12
Identities = 37/132 (28%), Positives = 67/132 (50%)
Query: 79 LDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVIN 138
L+ N +N+L + F + ++L++ N++ + F GL LK L L+ N++ ++
Sbjct: 64 LNFQNNFLNILYPNTFVNFSHAVSLHLGNNKLQNIEGGAFLGLSALKQLHLNNNELKILR 123
Query: 139 KTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQS 198
F +LE L +N I Y E F+ L L++L L++N I +P+N+ S
Sbjct: 124 ADTFLGIENLEYLQADYNLIKYIERGA-FNKLHKLKVLILNDNLISFLPDNIFR---FAS 179
Query: 199 LHYLYLNENLIE 210
L +L + N I+
Sbjct: 180 LTHLDIRGNRIQ 191
Score = 118 (46.6 bits), Expect = 1.9e-10, Sum P(3) = 1.9e-10
Identities = 39/124 (31%), Positives = 61/124 (49%)
Query: 102 NLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYF 161
+LN N ++ L +TF +L L NK+ I AF L+ L L+ N +
Sbjct: 63 HLNFQNNFLNILYPNTFVNFSHAVSLHLGNNKLQNIEGGAFLGLSALKQLHLNNNELKIL 122
Query: 162 EDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPF-T 220
++ F +++L L+ D N I + + L H+ L L LN+NLI + DN F F +
Sbjct: 123 R-ADTFLGIENLEYLQADYNLIKYIERGAFNKL-HK-LKVLILNDNLISFLPDNIFRFAS 179
Query: 221 LTNL 224
LT+L
Sbjct: 180 LTHL 183
Score = 104 (41.7 bits), Expect = 1.4e-13, Sum P(3) = 1.4e-13
Identities = 35/117 (29%), Positives = 58/117 (49%)
Query: 343 RLDLSGNNFSNIDSVAFKSLFSLKLVKI--NLIPNL--DSIDQRAFVDNIQLETVIINEN 398
RL L+GN + F L +L+ + + NLI + + D + N+QL + +N N
Sbjct: 429 RLYLNGNQIERLYPEIFSGLHNLQYLYLEYNLIKEILAGTFDS---MPNLQL--LYLNNN 483
Query: 399 MNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHF--PLERISFLDLSDNPLHCDCN 453
+ LK LP +F G L ++L+ N +L S L+ ++ +DL NP C C+
Sbjct: 484 L-LKSLPVYIFSG-APLARLNLRNNKFMYLPVSGVLDQLQSLTQIDLEGNPWDCTCD 538
Score = 84 (34.6 bits), Expect = 1.5e-11, Sum P(3) = 1.5e-11
Identities = 30/117 (25%), Positives = 55/117 (47%)
Query: 333 LTPLGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFVDNIQLET 392
LTP L +L ++GNN ++D F L L+ + + I F + L
Sbjct: 372 LTPK-PLNAKKLHVNGNNIKDVDISDFTEFEGLDLLHLGS-NQITLIKGEVFHNLTNLRR 429
Query: 393 VIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPL 448
+ +N N +++L ++F G NL+ + L+ N + + A F + + L L++N L
Sbjct: 430 LYLNGNQ-IERLYPEIFSGLHNLQYLYLEYNLIKEILAGTFDSMPNLQLLYLNNNLL 485
Score = 64 (27.6 bits), Expect = 1.5e-09, Sum P(3) = 1.5e-09
Identities = 27/106 (25%), Positives = 48/106 (45%)
Query: 344 LDLSGN-NFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNL 401
L LS N NI S++ + L K+++ N + +D F + L+ + + N +
Sbjct: 355 LGLSVNCQEKNIQSMSELTPKPLNAKKLHVNGNNIKDVDISDFTEFEGLDLLHLGSNQ-I 413
Query: 402 KQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDN 446
+ ++F TNL+ + L GN + L F L + +L L N
Sbjct: 414 TLIKGEVFHNLTNLRRLYLNGNQIERLYPEIFSGLHNLQYLYLEYN 459
Score = 61 (26.5 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 32/153 (20%), Positives = 58/153 (37%)
Query: 154 SFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVL 213
+F NI Y FS SL L NN++ ++ L +L L+LN N ++ +
Sbjct: 69 NFLNILYPNTFVNFSHAVSLH---LGNNKLQNIEGGAFLGL--SALKQLHLNNNELKILR 123
Query: 214 DNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALV 273
++F + NL L L L +P + + ++L
Sbjct: 124 ADTF-LGIENLEYLQADYNLIKYIERGAFNKLHKLKVLILNDNLISFLPDN-IFRFASLT 181
Query: 274 NLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN 306
+LD+ GN + + ++V++ L N
Sbjct: 182 HLDIRGNRIQKLPYIGVLEHIG-RVVELQLEDN 213
Score = 54 (24.1 bits), Expect = 1.4e-13, Sum P(3) = 1.4e-13
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 507 IVLNNLKCSSPPDIKGLEVKAVPENSVHC 535
IV+ LKC +P +E+K++ +N + C
Sbjct: 553 IVVKELKCETPVQFANIELKSL-KNEILC 580
Score = 37 (18.1 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 11/32 (34%), Positives = 12/32 (37%)
Query: 575 NRNLKHQSSYVDNCMNSHPTPILMLYSTGDSD 606
NRNL SY P P+ T SD
Sbjct: 323 NRNLSQIVSYQTRVPPLTPCPVPCFCKTHPSD 354
>UNIPROTKB|E1BAW2 [details] [associations]
symbol:LRRC32 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050710 "negative regulation of cytokine secretion"
evidence=IEA] [GO:0046007 "negative regulation of activated T cell
proliferation" evidence=IEA] [GO:0010628 "positive regulation of
gene expression" evidence=IEA] InterPro:IPR001611 PROSITE:PS51450
InterPro:IPR003591 SMART:SM00369 GO:GO:0010628 InterPro:IPR000372
SMART:SM00013 GO:GO:0046007 GO:GO:0050710
GeneTree:ENSGT00700000104185 CTD:2615 OMA:CCGNGWL EMBL:DAAA02041103
IPI:IPI00710724 RefSeq:NP_001180004.1 UniGene:Bt.88092
Ensembl:ENSBTAT00000001716 GeneID:615467 KEGG:bta:615467
NextBio:20899631 Uniprot:E1BAW2
Length = 662
Score = 182 (69.1 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 68/229 (29%), Positives = 109/229 (47%)
Query: 8 IFLILALTKLNKAICPSRCQ--CFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISN 65
I L+LA+ L A R + C E C GL VP L+ +++ + L N++ +
Sbjct: 5 ILLLLAVLTLGLATSQHRDKVPCRKVDKEVWCQGRGLLQVPSVLSRDIEVLNLSRNQLRS 64
Query: 66 V-HYTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEIS---ALSKDTFKGL 121
+ L FY LR LDLS N+I+ L F+ L +LN+++N ++ AL+ L
Sbjct: 65 ILALPLGFYTALRHLDLSANEISFLQPGVFQALPHLEHLNLAHNHLAVGTALNTGGLGPL 124
Query: 122 KELKTLDLSYNKI-SVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDN 180
L +LDLS N + S + + + L L L+ N++T F S +L L L +
Sbjct: 125 LHLTSLDLSGNSLYSGLVEQLLGEAPALRTLSLAENSLTRL-GRRTFLSTPALERLDLHS 183
Query: 181 NQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLAL 229
N ++D+ + LP L +L L+ N + + D F+L L L L
Sbjct: 184 NVLMDIEDGAFEALPR--LVHLNLSRNSLTCISD----FSLQQLRVLDL 226
Score = 119 (46.9 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 42/134 (31%), Positives = 63/134 (47%)
Query: 51 PEVQTIILRENRISNV-HYTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNE 109
P ++T+ L EN ++ + T L LDL N + + FE +L++LN+S N
Sbjct: 150 PALRTLSLAENSLTRLGRRTFLSTPALERLDLHSNVLMDIEDGAFEALPRLVHLNLSRNS 209
Query: 110 ISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSS 169
++ +S F L++L+ LDLS N I R L L L N + +F D S+
Sbjct: 210 LTCISD--FS-LQQLRVLDLSCNSIEAFQTAEPRAEYQLAWLDLRENKLLHFPD---LSA 263
Query: 170 LKSLRILKLDNNQI 183
L L L NN I
Sbjct: 264 LPRLIYLNASNNLI 277
Score = 110 (43.8 bits), Expect = 9.5e-06, Sum P(2) = 9.5e-06
Identities = 68/237 (28%), Positives = 95/237 (40%)
Query: 74 IELRSLDLSVNKI-NVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYN 132
+ L SLDLS N + + L L L+++ N ++ L + TF L+ LDL N
Sbjct: 125 LHLTSLDLSGNSLYSGLVEQLLGEAPALRTLSLAENSLTRLGRRTFLSTPALERLDLHSN 184
Query: 133 KISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLS 192
+ I AF L L LS N++T D FS L+ LR+L L N I +
Sbjct: 185 VLMDIEDGAFEALPRLVHLNLSRNSLTCISD---FS-LQQLRVLDLSCNSI-EAFQTAEP 239
Query: 193 NLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXX 252
+Q L +L L EN + D S L L L LH
Sbjct: 240 RAEYQ-LAWLDLRENKLLHFPDLS---ALPRLIYLNASNNLIRLPAEPPRGGAEGLHAPS 295
Query: 253 XXXXXX-XAIPTKQLSK--LSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN 306
+ P++ S LS L+NLDLS N + + L SL+ +NL N
Sbjct: 296 EGWSSLPLSNPSRNTSTQPLSQLLNLDLSYNEIELVPEGFLEPLTSLR--SLNLSRN 350
Score = 101 (40.6 bits), Expect = 8.8e-05, Sum P(2) = 8.8e-05
Identities = 38/111 (34%), Positives = 58/111 (52%)
Query: 98 NKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLH-LELLILSFN 156
++LLNL++SYNEI + + + L L++L+LS N + A +L L LL +S N
Sbjct: 316 SQLLNLDLSYNEIELVPEGFLEPLTSLRSLNLSRNCLRAFE--AQPGSLPCLTLLDISHN 373
Query: 157 NITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNEN 207
+ E +L SLR L L +N + D+P ++L SL L L N
Sbjct: 374 ALETLELGA--RALGSLRTLLLQDNALRDLPLYTFTSLA--SLQRLNLQGN 420
Score = 75 (31.5 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 34/128 (26%), Positives = 62/128 (48%)
Query: 331 FSLTPLGTLKCDRLDLSGNNFSNIDS---------VAFKSLFSLKLVKINLIPN-LDSID 380
++ T L +L+ RL+L GN S VAF + SL++ +NL N ++ +
Sbjct: 404 YTFTSLASLQ--RLNLQGNRLSPCGGPAEPGPSGCVAFSGISSLRV--LNLADNEMEILQ 459
Query: 381 QRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFPLERISF 440
AF+ + L + ++ N L P L +L+ ++L+GN L+ L+ +
Sbjct: 460 AGAFL-HTPLAELDLSSNPGLDVAPGALAGLEGSLEVLALQGNGLAVLQVDLPCFSCLKR 518
Query: 441 LDLSDNPL 448
L+L++N L
Sbjct: 519 LNLAENRL 526
Score = 70 (29.7 bits), Expect = 4.5e-13, Sum P(2) = 4.5e-13
Identities = 35/126 (27%), Positives = 62/126 (49%)
Query: 330 AFSLTPLGTLKC-DRLDLSGNNFSNIDSVAFKSLFSLK--LVKINLIPNLD--SIDQRAF 384
AF P G+L C LD+S N ++ A ++L SL+ L++ N + +L + A
Sbjct: 354 AFEAQP-GSLPCLTLLDISHNALETLELGA-RALGSLRTLLLQDNALRDLPLYTFTSLAS 411
Query: 385 VDNIQLETVIINE-NMNLKQLPSKL--FQGNTNLKSVSLKGNSLSHLEASHFPLERISFL 441
+ + L+ ++ + PS F G ++L+ ++L N + L+A F ++ L
Sbjct: 412 LQRLNLQGNRLSPCGGPAEPGPSGCVAFSGISSLRVLNLADNEMEILQAGAFLHTPLAEL 471
Query: 442 DLSDNP 447
DLS NP
Sbjct: 472 DLSSNP 477
Score = 62 (26.9 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
Identities = 18/60 (30%), Positives = 32/60 (53%)
Query: 389 QLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFPLERISFLDLSDNPL 448
QL + ++ N ++ +P + T+L+S++L N L EA L ++ LD+S N L
Sbjct: 317 QLLNLDLSYN-EIELVPEGFLEPLTSLRSLNLSRNCLRAFEAQPGSLPCLTLLDISHNAL 375
>UNIPROTKB|A1KZ92 [details] [associations]
symbol:PXDNL "Peroxidasin-like protein" species:9606 "Homo
sapiens" [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0004601 "peroxidase activity"
evidence=ISS] [GO:0042744 "hydrogen peroxide catabolic process"
evidence=ISS] [GO:0020037 "heme binding" evidence=ISS] [GO:0055114
"oxidation-reduction process" evidence=ISS] [GO:0005615
"extracellular space" evidence=ISS] InterPro:IPR001611
InterPro:IPR001007 InterPro:IPR002007 InterPro:IPR007110
InterPro:IPR010255 InterPro:IPR019791 Pfam:PF00093 Pfam:PF03098
PRINTS:PR00457 PROSITE:PS00436 PROSITE:PS01208 PROSITE:PS50184
PROSITE:PS50292 PROSITE:PS50835 PROSITE:PS51450 SMART:SM00214
GO:GO:0005737 GO:GO:0005615 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0046872 InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0020037
GO:GO:0090305 GO:GO:0004601 GO:GO:0004519 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 GO:GO:0042744
SUPFAM:SSF48113 PROSITE:PS00435 EMBL:CH471068 MEROPS:I43.001
Gene3D:1.10.640.10 eggNOG:NOG262194 HOGENOM:HOG000016084
EMBL:AC090186 EMBL:EU170240 EMBL:AY877349 EMBL:AC103958
EMBL:AC107374 EMBL:AC011128 EMBL:AC012413 EMBL:AK058200
EMBL:AK131524 IPI:IPI00065049 IPI:IPI00890814 RefSeq:NP_653252.3
UniGene:Hs.444882 ProteinModelPortal:A1KZ92 SMR:A1KZ92
PeroxiBase:5398 PeroxiBase:5827 PhosphoSite:A1KZ92 PRIDE:A1KZ92
Ensembl:ENST00000356297 Ensembl:ENST00000543296 GeneID:137902
KEGG:hsa:137902 UCSC:uc003xqu.4 CTD:137902 GeneCards:GC08M052232
HGNC:HGNC:26359 HPA:HPA007919 neXtProt:NX_A1KZ92
PharmGKB:PA142671110 HOVERGEN:HBG108312 OMA:EFRYNDL
OrthoDB:EOG4HDSSN GenomeRNAi:137902 NextBio:83705 Bgee:A1KZ92
CleanEx:HS_PXDNL Genevestigator:A1KZ92 Uniprot:A1KZ92
Length = 1463
Score = 214 (80.4 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 66/181 (36%), Positives = 97/181 (53%)
Query: 6 TCIFLILALTKLNKAICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTII-LRENRIS 64
T +FL LA L CPSRC CF K C L+ +P Q+ P+ T++ LR NRI
Sbjct: 9 TTLFL-LAGWCLPGLPCPSRCLCF--KSTVRCMHLMLDHIP-QV-PQQTTVLDLRFNRIR 63
Query: 65 NVHYTLSFYIE-LRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKE 123
+ + ++ L +L L+ N I + + FE LL L + NEI AL K TFKGL
Sbjct: 64 EIPGSAFKKLKNLNTLLLNNNHIRKISRNAFEGLENLLYLYLYKNEIHALDKQTFKGLIS 123
Query: 124 LKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQI 183
L+ L + +N++ ++ F D L LE L L N ++ FS+L SL+ L+LD+N +
Sbjct: 124 LEHLYIHFNQLEMLQPETFGDLLRLERLFLHNNKLSKIPAGS-FSNLDSLKRLRLDSNAL 182
Query: 184 L 184
+
Sbjct: 183 V 183
>ZFIN|ZDB-GENE-060531-8 [details] [associations]
symbol:rxfp2l "relaxin/insulin-like family peptide
receptor 2, like" species:7955 "Danio rerio" [GO:0007165 "signal
transduction" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0004930 "G-protein coupled receptor activity"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR008112
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR01739
PROSITE:PS50262 PROSITE:PS51450 ZFIN:ZDB-GENE-060531-8
GO:GO:0016021 GO:GO:0004930 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 InterPro:IPR026906
Pfam:PF13306 HOVERGEN:HBG026354 GeneTree:ENSGT00650000093266
OrthoDB:EOG4NGGM1 EMBL:BX005476 EMBL:CU915756 IPI:IPI00897044
UniGene:Dr.141917 Ensembl:ENSDART00000143448 Uniprot:B0S5B5
Length = 622
Score = 209 (78.6 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 70/233 (30%), Positives = 103/233 (44%)
Query: 78 SLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVI 137
+L+L+ N+I L F L L++ N I +SK F GL L+ L LS NKIS +
Sbjct: 50 ALELNSNRIESLSRDLFIRYRHLERLHLESNSIETISKRAFSGLVALRKLFLSQNKISSL 109
Query: 138 NKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPN-NVLSNLPH 196
F D LE LIL N I+ F LKSL L L NN + P ++ +P
Sbjct: 110 KAGIFSDLSSLEWLILDENRISSLRQKS-FEGLKSLFFLSLLNNSVEQFPKTSICHEMPR 168
Query: 197 QSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXX 256
L++L + N+I ++ +SF ++L LAL ++ L
Sbjct: 169 --LNWLEMEGNIISSLWASSFK-NCSSLTVLALRRNRISTIEEGTFADMQRLIDLDVSVN 225
Query: 257 XXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINL--IPNL 307
+P L L L++S N NI S F SL +L+ + + IPN+
Sbjct: 226 QIKDLPPSLFQNLQNLKQLNISNNPLVNIYSNQFDSLVNLQSLSMEEVEIPNI 278
Score = 168 (64.2 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 70/277 (25%), Positives = 108/277 (38%)
Query: 21 ICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSF-YIELRSL 79
+ P C C +K+ +C L VP ++ V + L NRI ++ L Y L L
Sbjct: 19 VYPDTCHCEGRKV--NCNGKNLLHVPA-VSSNVTALELNSNRIESLSRDLFIRYRHLERL 75
Query: 80 DLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINK 139
L N I + F L L +S N+IS+L F L L+ L L N+IS + +
Sbjct: 76 HLESNSIETISKRAFSGLVALRKLFLSQNKISSLKAGIFSDLSSLEWLILDENRISSLRQ 135
Query: 140 TAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSL 199
+F L L L N++ F + I + L L+++ N I + + N SL
Sbjct: 136 KSFEGLKSLFFLSLLNNSVEQFPKTSICHEMPRLNWLEMEGNIISSLWASSFKNC--SSL 193
Query: 200 HYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXX 259
L L N I T+ + +F + L L + L+ L
Sbjct: 194 TVLALRRNRISTIEEGTFA-DMQRLIDLDVSVNQIKDLPPSLFQNLQNLKQLNISNNPLV 252
Query: 260 AIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSL 296
I + Q L L +L + NI F+ L +L
Sbjct: 253 NIYSNQFDSLVNLQSLSMEEVEIPNISIRMFRPLTNL 289
Score = 122 (48.0 bits), Expect = 0.00045, P = 0.00045
Identities = 50/220 (22%), Positives = 90/220 (40%)
Query: 218 PFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDL 277
P +N+ L L + R L I + S L AL L L
Sbjct: 42 PAVSSNVTALELNSNRIESLSRDLFIRYRHLERLHLESNSIETISKRAFSGLVALRKLFL 101
Query: 278 SGNNFSNIDSVAFKSLFSLK--LVKINLIPNLDSIDQXXXXXXXXXXXXXXXXXAFSLTP 335
S N S++ + F L SL+ ++ N I +L F T
Sbjct: 102 SQNKISSLKAGIFSDLSSLEWLILDENRISSLRQKSFEGLKSLFFLSLLNNSVEQFPKTS 161
Query: 336 L--GTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFVDNIQLETV 393
+ + + L++ GN S++ + +FK+ SL ++ + + +I++ F D +L +
Sbjct: 162 ICHEMPRLNWLEMEGNIISSLWASSFKNCSSLTVLALRR-NRISTIEEGTFADMQRLIDL 220
Query: 394 IINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHF 433
++ N +K LP LFQ NLK +++ N L ++ ++ F
Sbjct: 221 DVSVNQ-IKDLPPSLFQNLQNLKQLNISNNPLVNIYSNQF 259
>UNIPROTKB|F1SGM5 [details] [associations]
symbol:LGR4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090190 "positive regulation of branching involved in
ureteric bud morphogenesis" evidence=IEA] [GO:0072282 "metanephric
nephron tubule morphogenesis" evidence=IEA] [GO:0072224
"metanephric glomerulus development" evidence=IEA] [GO:0072202
"cell differentiation involved in metanephros development"
evidence=IEA] [GO:0061290 "canonical Wnt receptor signaling pathway
involved in metanephric kidney development" evidence=IEA]
[GO:0050673 "epithelial cell proliferation" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0030539 "male genitalia
development" evidence=IEA] [GO:0016500 "protein-hormone receptor
activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002131 InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237
PRINTS:PR00373 PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021
GO:GO:0045892 GO:GO:0045893 InterPro:IPR003591 SMART:SM00369
GO:GO:0030539 GO:GO:0090190 GO:GO:0050673 GO:GO:0016500
GeneTree:ENSGT00650000092962 GO:GO:0061290 GO:GO:0072282
OMA:DGYWSDC GO:GO:0072202 GO:GO:0072224 EMBL:CU462866 EMBL:CU466955
Ensembl:ENSSSCT00000014563 Uniprot:F1SGM5
Length = 886
Score = 211 (79.3 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 104/373 (27%), Positives = 157/373 (42%)
Query: 83 VNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAF 142
+N I L F+ L L ++ N++S + GLKELK L L N++ + A
Sbjct: 1 MNNITQLPEDAFKNFPFLEELRLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAI 60
Query: 143 RDTLHLELLILSFNNITYF-EDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHY 201
R L+ L L N+IT EDS F L LR L LD+N + +VP LSNLP +L
Sbjct: 61 RGLSALQSLRLDANHITSVPEDS--FEGLTQLRHLWLDDNSLTEVPVQPLSNLP--TLQA 116
Query: 202 LYLNENLIETVLDNSFPFT-LTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXA 260
L L N I ++ D F FT L++L L L L L
Sbjct: 117 LTLALNKISSIPD--FAFTNLSSLVVLHLHNNKIKSLGQHCFDGLDNLETLDLNYNNLGE 174
Query: 261 IPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKI--NLIPNL-DSIDQXXXXX 317
P + + L +L L N+ S I AF L+ + + N + + +S
Sbjct: 175 FP-QAIKALPSLKELLFHSNSISVIPDGAFDGNPLLRTIHLYDNPLSFVGNSAFHNLSDL 233
Query: 318 XXXXXXXXXXXXAF-SLTPLGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNL 376
F +LT GT+ + L L+G S+I S + L+ + ++ N+
Sbjct: 234 HSLVIRGASMVQRFPNLT--GTVHLESLTLTGTKISSISSNLCQEQKMLRTLDLSY-NNI 290
Query: 377 DSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-L 435
D +F LE + + N + Q+ FQG T+L+ + L N + + F L
Sbjct: 291 K--DLPSFNGCYALEEISLQRNQ-IHQIKEGTFQGLTSLRILDLSRNLIHEIHDRAFAKL 347
Query: 436 ERISFLDLSDNPL 448
I+ LD+S N L
Sbjct: 348 GSITNLDISFNEL 360
Score = 174 (66.3 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 93/379 (24%), Positives = 156/379 (41%)
Query: 51 PEVQTIILRENRISNVH-YTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNE 109
P ++ + L N +S +H LS EL+ L L N++ + S + L +L + N
Sbjct: 16 PFLEELRLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANH 75
Query: 110 ISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSS 169
I+++ +D+F+GL +L+ L L N ++ + + L+ L L+ N I+ D F++
Sbjct: 76 ITSVPEDSFEGLTQLRHLWLDDNSLTEVPVQPLSNLPTLQALTLALNKISSIPDFA-FTN 134
Query: 170 LKSLRILKLDNNQILDVPNNV---LSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHT 226
L SL +L L NN+I + + L NL L+Y L E + + + P +L L
Sbjct: 135 LSSLVVLHLHNNKIKSLGQHCFDGLDNLETLDLNYNNLGE-FPQAI--KALP-SLKELLF 190
Query: 227 LALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSG-NNFSNI 285
+ LRT+H LS L +LV S F N+
Sbjct: 191 HSNSISVIPDGAFDGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHSLVIRGASMVQRFPNL 250
Query: 286 DSVAFKSLFSLKLVKINLIPNLDSIDQXXXXXXXXXXXXXXXXXAFSLTPLGTLKCDRLD 345
+L KI+ I + +Q +F+ G + +
Sbjct: 251 TGTVHLESLTLTGTKISSISSNLCQEQKMLRTLDLSYNNIKDLPSFN----GCYALEEIS 306
Query: 346 LSGNNFSNIDSVAFKSLFSLKLVKINLIPNL-DSIDQRAFVDNIQLETVIINENMNLKQL 404
L N I F+ L SL++ ++L NL I RAF +L + I N +++ +L
Sbjct: 307 LQRNQIHQIKEGTFQGLTSLRI--LDLSRNLIHEIHDRAFA---KLGS-ITNLDISFNEL 360
Query: 405 PSKLFQGNTNLKSVSLKGN 423
S +G L + L GN
Sbjct: 361 TSFPTEGLNGLNQLKLVGN 379
Score = 160 (61.4 bits), Expect = 5.4e-08, P = 5.4e-08
Identities = 77/325 (23%), Positives = 138/325 (42%)
Query: 52 EVQTIILRENRISNVHYT-LSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEI 110
+++ + L +N ++ V LS L++L L++NKI+ + F + L+ L++ N+I
Sbjct: 89 QLRHLWLDDNSLTEVPVQPLSNLPTLQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKI 148
Query: 111 SALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSL 170
+L + F GL L+TLDL+YN + + A + L+ L+ N+I+ D F
Sbjct: 149 KSLGQHCFDGLDNLETLDLNYNNLGEFPQ-AIKALPSLKELLFHSNSISVIPDGA-FDGN 206
Query: 171 KSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLN-ENLIETVLDNSFP-FTLT-NLHTL 227
LR + L +N + V N+ NL LH L + ++++ FP T T +L +L
Sbjct: 207 PLLRTIHLYDNPLSFVGNSAFHNL--SDLHSLVIRGASMVQR-----FPNLTGTVHLESL 259
Query: 228 ALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDS 287
L + L +P+ + AL + L N I
Sbjct: 260 TLTGTKISSISSNLCQEQKMLRTLDLSYNNIKDLPS--FNGCYALEEISLQRNQIHQIKE 317
Query: 288 VAFKSLFSLKLVKI--NLIPNLDSIDQXXXXXXXXXXXXXXXXXAFSLTPLGTLKCDRLD 345
F+ L SL+++ + NLI + D+ S G ++L
Sbjct: 318 GTFQGLTSLRILDLSRNLIHEIH--DRAFAKLGSITNLDISFNELTSFPTEGLNGLNQLK 375
Query: 346 LSGNNFSNIDSVAFKSLFSLKLVKI 370
L GN F +++A K +L+ + +
Sbjct: 376 LVGN-FKLKEALAAKDFVNLRSLSV 399
Score = 134 (52.2 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 55/182 (30%), Positives = 82/182 (45%)
Query: 39 DAGLEVVPIQ-LN--PEVQTIILRENRISNV-HYTLSFYIELRSLDLSVNKINVLGSHNF 94
D L VP+Q L+ P +Q + L N+IS++ + + L L L NKI LG H F
Sbjct: 97 DNSLTEVPVQPLSNLPTLQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIKSLGQHCF 156
Query: 95 EYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILS 154
+ + L L+++YN + + K L LK L N ISVI AF L + L
Sbjct: 157 DGLDNLETLDLNYNNLGEFPQ-AIKALPSLKELLFHSNSISVIPDGAFDGNPLLRTIHL- 214
Query: 155 FNNITYFEDSEIFSSLKSLRILKLDNNQILD-VPNNVLSNLPHQSLHYLYLNENLIETVL 213
++N F + F +L L L + ++ PN L+ H L L L I ++
Sbjct: 215 YDNPLSFVGNSAFHNLSDLHSLVIRGASMVQRFPN--LTGTVH--LESLTLTGTKISSIS 270
Query: 214 DN 215
N
Sbjct: 271 SN 272
>UNIPROTKB|F1SUL2 [details] [associations]
symbol:LRRC32 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050710 "negative regulation of cytokine secretion"
evidence=IEA] [GO:0046007 "negative regulation of activated T cell
proliferation" evidence=IEA] [GO:0010628 "positive regulation of
gene expression" evidence=IEA] InterPro:IPR001611 PROSITE:PS51450
InterPro:IPR003591 SMART:SM00369 GO:GO:0010628 InterPro:IPR000372
SMART:SM00013 GO:GO:0046007 GO:GO:0050710
GeneTree:ENSGT00700000104185 CTD:2615 OMA:CCGNGWL EMBL:CU915508
RefSeq:XP_003129719.1 UniGene:Ssc.93908 Ensembl:ENSSSCT00000016222
GeneID:100522452 KEGG:ssc:100522452 Uniprot:F1SUL2
Length = 663
Score = 191 (72.3 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 69/229 (30%), Positives = 108/229 (47%)
Query: 8 IFLILALTKLNKAICPSRCQ--CFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISN 65
I L+LA+ L A R + C EASC GL VP L +++ + L N++ +
Sbjct: 5 ILLLLAMLTLGLASSQHRDKVPCKKVDKEASCQGLGLLQVPSMLARDIEALDLSGNQLRS 64
Query: 66 VHYT-LSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEIS---ALSKDTFKGL 121
+ + L FY+ LR LDLS N+I+ L F+ L +LN+++N ++ AL L
Sbjct: 65 IPASPLGFYVALRRLDLSANEISSLQPGAFQALPHLEHLNLAHNRLAQGMALGAGGLGPL 124
Query: 122 KELKTLDLSYNKI-SVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDN 180
L LDLS N + S + + + L L L+ N++T F +L L L +
Sbjct: 125 PHLTALDLSGNSLYSGLAEQLLGEAPALRTLSLAENSLTRLA-RHTFRGAPALEWLDLHS 183
Query: 181 NQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLAL 229
N ++D+ + LP L +L L+ N + + D F L L L L
Sbjct: 184 NVLMDIEDGAFEALPR--LAHLNLSRNSLTCISD----FRLQQLRVLDL 226
Score = 133 (51.9 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 58/234 (24%), Positives = 94/234 (40%)
Query: 75 ELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKI 134
++ +LDLS N++ + + + L L++S NEIS+L F+ L L+ L+L++N++
Sbjct: 51 DIEALDLSGNQLRSIPASPLGFYVALRRLDLSANEISSLQPGAFQALPHLEHLNLAHNRL 110
Query: 135 S---VINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVL 191
+ + HL L LS N++ ++ +LR L L N + + +
Sbjct: 111 AQGMALGAGGLGPLPHLTALDLSGNSLYSGLAEQLLGEAPALRTLSLAENSLTRLARHTF 170
Query: 192 SNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXX 251
P +L +L L+ N++ + D +F L L L L LR L
Sbjct: 171 RGAP--ALEWLDLHSNVLMDIEDGAFE-ALPRLAHLNLSRNSLTCISDFRLQQLRVLDLS 227
Query: 252 XXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNI-DSVAFKSLFSLKLVKINLI 304
P L LDL N + D A L L V NLI
Sbjct: 228 CNSIEAFQTAPEPPAEY--QLAWLDLRENRLLHFPDVTALPRLVYLN-VSNNLI 278
Score = 101 (40.6 bits), Expect = 0.00092, Sum P(2) = 0.00092
Identities = 36/112 (32%), Positives = 54/112 (48%)
Query: 98 NKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNN 157
++LLNL++SYNEI + + + L L+ L+LS N + L L +S N
Sbjct: 316 SQLLNLDLSYNEIELVPEGFLEHLTSLRFLNLSRNCLQAFRAWGAGSLPCLMRLDISHNA 375
Query: 158 ITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLI 209
+ E +L SLR L L +N + D+P ++L SL L L N I
Sbjct: 376 LEKLELGA--GALGSLRTLLLQDNALWDLPPYAFASLA--SLQRLNLQGNRI 423
Score = 65 (27.9 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 32/128 (25%), Positives = 61/128 (47%)
Query: 331 FSLTPLGTLKCDRLDLSGNNFSNIDS---------VAFKSLFSLKLVKINLIPN-LDSID 380
++ L +L+ RL+L GN S VAF + SL+ +NL+ N ++++
Sbjct: 405 YAFASLASLQ--RLNLQGNRISPCGGPGEPGPSGCVAFSGISSLRF--LNLVDNKVETLR 460
Query: 381 QRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFPLERISF 440
AF+ + L + ++ N L L +L+ ++L+GN L+ L+ +
Sbjct: 461 AGAFL-HTPLTELDLSANPGLDVATGALAGLEGSLEVLALQGNGLATLQVDLPCFSCLKR 519
Query: 441 LDLSDNPL 448
L+L++N L
Sbjct: 520 LNLAENRL 527
Score = 61 (26.5 bits), Expect = 4.0e-13, Sum P(2) = 4.0e-13
Identities = 36/126 (28%), Positives = 60/126 (47%)
Query: 330 AFSLTPLGTLKC-DRLDLSGNNFSNID--SVAFKSLFSLKLVKINLIPNLD--SIDQRAF 384
AF G+L C RLD+S N ++ + A SL +L L++ N + +L + A
Sbjct: 354 AFRAWGAGSLPCLMRLDISHNALEKLELGAGALGSLRTL-LLQDNALWDLPPYAFASLAS 412
Query: 385 VDNIQLETVIINENMNLKQL-PSKL--FQGNTNLKSVSLKGNSLSHLEASHFPLERISFL 441
+ + L+ I+ + PS F G ++L+ ++L N + L A F ++ L
Sbjct: 413 LQRLNLQGNRISPCGGPGEPGPSGCVAFSGISSLRFLNLVDNKVETLRAGAFLHTPLTEL 472
Query: 442 DLSDNP 447
DLS NP
Sbjct: 473 DLSANP 478
>FB|FBgn0261269 [details] [associations]
symbol:conv "convoluted" species:7227 "Drosophila
melanogaster" [GO:0035151 "regulation of tube size, open tracheal
system" evidence=IMP] [GO:0007424 "open tracheal system
development" evidence=IMP] [GO:0008045 "motor neuron axon guidance"
evidence=IMP] [GO:0035159 "regulation of tube length, open tracheal
system" evidence=IMP] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 EMBL:AE013599 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0008045
GeneTree:ENSGT00690000101816 GO:GO:0035159 InterPro:IPR026906
Pfam:PF13306 EMBL:EU814872 RefSeq:NP_610948.2 UniGene:Dm.23922
SMR:A1Z9N6 STRING:A1Z9N6 EnsemblMetazoa:FBtr0087540 GeneID:36588
KEGG:dme:Dmel_CG8561 UCSC:CG8561-RA CTD:36588 FlyBase:FBgn0261269
InParanoid:A1Z9N6 OMA:TIVCENT OrthoDB:EOG4ZGMT6 GenomeRNAi:36588
NextBio:799366 Uniprot:A1Z9N6
Length = 1092
Score = 218 (81.8 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 80/357 (22%), Positives = 157/357 (43%)
Query: 95 EYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILS 154
E N L + ++ +S L +TF+ L++LKTLDL N++ + + F++ LE+L +S
Sbjct: 171 EIANSLGIIRVTNGNLSDLPIETFQPLRKLKTLDLHGNQLENLKRNQFKNLRELEVLDIS 230
Query: 155 FNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLD 214
N I E I + L L + +N + ++ + + L L+L+ N I +
Sbjct: 231 HNQIKKLEAQHI-ADLTKLGWCNVSHNALSELSRGTFAR--NSVLKVLHLSHNQIARLDA 287
Query: 215 NSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVN 274
NSF + L L L ++ + I + ++++ +
Sbjct: 288 NSFR-GMRFLRRLFLSDNVLTDIGRGTFGSIARIGTIDLARNRLKKIEFQMFTQMNYVEL 346
Query: 275 LDLSGNNFSNIDSVAFKSLFSLKL-VKINLIPNLDSIDQXXXXXXXXXXXXXXXXXAFSL 333
LDL+ NN + I+ +FK ++ + V N + +++ FS
Sbjct: 347 LDLAENNITKIEKNSFKDIYQAIINVSHNALELIETAAFENCVNITVLDLSHNRLANFSR 406
Query: 334 TPLG-TLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFVDNIQLET 392
T LS NN +N+ + +++ LK++ + ++ I + F +L T
Sbjct: 407 RSFDETTFATYFQLSYNNLTNLAQIPIQNMTGLKVLNASY-NSITEIPKNCFPKLYELHT 465
Query: 393 VIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHF-PLERISFLDLSDNPL 448
+ ++ N N+ + + +FQ +L+S+ L NS+ +++S F L + +DLS N L
Sbjct: 466 IDVSHN-NISSIFNGVFQTLFSLRSIDLSHNSMREIKSSTFGTLPTLLEMDLSHNEL 521
Score = 209 (78.6 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 105/427 (24%), Positives = 184/427 (43%)
Query: 38 TDAGLEVVPIQ-LNP--EVQTIILRENRISNVHYTLSFYI-ELRSLDLSVNKINVLGSHN 93
T+ L +PI+ P +++T+ L N++ N+ + EL LD+S N+I L + +
Sbjct: 182 TNGNLSDLPIETFQPLRKLKTLDLHGNQLENLKRNQFKNLRELEVLDISHNQIKKLEAQH 241
Query: 94 FEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLIL 153
KL N+S+N +S LS+ TF LK L LS+N+I+ ++ +FR L L L
Sbjct: 242 IADLTKLGWCNVSHNALSELSRGTFARNSVLKVLHLSHNQIARLDANSFRGMRFLRRLFL 301
Query: 154 SFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVL 213
S N +T F S+ + + L N++ + + + + + L L L EN I +
Sbjct: 302 SDNVLTDIGRGT-FGSIARIGTIDLARNRLKKIEFQMFTQMNYVEL--LDLAENNITKIE 358
Query: 214 DNSFPF---TLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLS 270
NSF + N+ AL +T+ L + + +
Sbjct: 359 KNSFKDIYQAIINVSHNALELIETAAFENCVNITVLDLSHNRLANFSR-----RSFDETT 413
Query: 271 ALVNLDLSGNNFSNIDSVAFKSLFSLKLVK-----INLIPN--LDSIDQXXXXXXXXXXX 323
LS NN +N+ + +++ LK++ I IP + +
Sbjct: 414 FATYFQLSYNNLTNLAQIPIQNMTGLKVLNASYNSITEIPKNCFPKLYELHTIDVSHNNI 473
Query: 324 XXXXXXAFSLTPLGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQR 382
F L +L+ +DLS N+ I S F +L +L ++++L N L S+ +
Sbjct: 474 SSIFNGVFQT--LFSLRS--IDLSHNSMREIKSSTFGTLPTL--LEMDLSHNELVSVVRG 527
Query: 383 AFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFL 441
+ L + +N N QL KLFQ +L + N L+++ + +P + + +L
Sbjct: 528 SLAKLTSLRQLYLNNN----QL-EKLFQLPISLNELYFSHNRLTNIPSGTWPVMNSLIYL 582
Query: 442 DLSDNPL 448
DLS N L
Sbjct: 583 DLSHNQL 589
Score = 207 (77.9 bits), Expect = 2.7e-12, Sum P(2) = 2.7e-12
Identities = 106/427 (24%), Positives = 177/427 (41%)
Query: 42 LEVVPIQLNPEVQTIILRENRISNVHYTL--SFYIELRSLDLSVNKINVLGSHNFEYQNK 99
L +PIQ ++ + N I+ + Y EL ++D+S N I+ + + F+
Sbjct: 428 LAQIPIQNMTGLKVLNASYNSITEIPKNCFPKLY-ELHTIDVSHNNISSIFNGVFQTLFS 486
Query: 100 LLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNIT 159
L ++++S+N + + TF L L +DLS+N++ + + + L L L+ N +
Sbjct: 487 LRSIDLSHNSMREIKSSTFGTLPTLLEMDLSHNELVSVVRGSLAKLTSLRQLYLNNNQL- 545
Query: 160 YFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPF 219
++F SL L +N++ ++P+ + SL YL L+ N + L N F
Sbjct: 546 ----EKLFQLPISLNELYFSHNRLTNIPSGTWPVM--NSLIYLDLSHNQLGDTL-NGESF 598
Query: 220 T-LTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLS 278
T L + L L + TL + KL L L+L
Sbjct: 599 TGLLVVQRLKLQNNGISQPPKDAVAVMSTLQYLHLENNNITTLERSAFGKLPVLFELNLY 658
Query: 279 GNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQXXXXXXXXXXXXXXXXXAF-SLTPLG 337
GN +I AF+ L L+L+ +NL N I +F SLT L
Sbjct: 659 GNQVKDISKRAFEGL--LQLLTLNLSSN--GIQTLQNDIFVGLPSLRNLDLSFNSLTKLD 714
Query: 338 T---------LKCDRLDLSGNNFSNIDSVAFKS--LFSLKLVKINLIPNLDSI-DQRAFV 385
L + LDLS N S + F S L +NL NL I
Sbjct: 715 NKTNGVLDDLLSLETLDLSHNRISFVTKKTFPSHQYIPYNLRNLNLSYNLMPILTYDITF 774
Query: 386 DNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEAS-H-FPL-ERISFLD 442
+L + ++ N + L + T+L+S+ + N LS+L++ H F L + +S+LD
Sbjct: 775 GTKKLVRLDVSHNQ-INDLRRGVISNFTSLQSLDMSYNELSNLKSEEHIFDLPQNLSWLD 833
Query: 443 LSDNPLH 449
LS N ++
Sbjct: 834 LSHNKIY 840
Score = 170 (64.9 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 102/415 (24%), Positives = 169/415 (40%)
Query: 53 VQTIILRENRISNVHY-TLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEIS 111
+++I L N + + T L +DLS N++ + + L L ++ N++
Sbjct: 487 LRSIDLSHNSMREIKSSTFGTLPTLLEMDLSHNELVSVVRGSLAKLTSLRQLYLNNNQLE 546
Query: 112 ALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLK 171
L F+ L L S+N+++ I + L L LS N + + E F+ L
Sbjct: 547 KL----FQLPISLNELYFSHNRLTNIPSGTWPVMNSLIYLDLSHNQLGDTLNGESFTGLL 602
Query: 172 SLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXX 231
++ LKL NN I P + ++ + +L YL+L N I T+ ++F L L L L
Sbjct: 603 VVQRLKLQNNGISQPPKDAVAVM--STLQYLHLENNNITTLERSAFG-KLPVLFELNLYG 659
Query: 232 XXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFK 291
L L + L +L NLDLS N+ + +D+
Sbjct: 660 NQVKDISKRAFEGLLQLLTLNLSSNGIQTLQNDIFVGLPSLRNLDLSFNSLTKLDNKTNG 719
Query: 292 SLFSL-KLVKINLIPNLDSI--DQXXXXXXXXXXXXXXXXXAFSLTPL-------GTLKC 341
L L L ++L N S + +++L P+ GT K
Sbjct: 720 VLDDLLSLETLDLSHNRISFVTKKTFPSHQYIPYNLRNLNLSYNLMPILTYDITFGTKKL 779
Query: 342 DRLDLSGNNFSNIDSVAFKSLFSLKLVKI--NLIPNLDSIDQRAFVDNIQLETVIINENM 399
RLD+S N +++ + SL+ + + N + NL S ++ F L + ++ N
Sbjct: 780 VRLDVSHNQINDLRRGVISNFTSLQSLDMSYNELSNLKS-EEHIFDLPQNLSWLDLSHN- 837
Query: 400 NLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHF-PLERISFLDLSDNPLHCDCN 453
+ LP +LK V L NSL + AS + S + L+ NPLHC CN
Sbjct: 838 KIYHLPFANLVKVKSLKYVDLTNNSLEDVPASIVGSMRNGSQVLLAGNPLHCGCN 892
Score = 42 (19.8 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 7/27 (25%), Positives = 16/27 (59%)
Query: 509 LNNLKCSSPPDIKGLEVKAVPENSVHC 535
L ++ C +P IK ++ ++ + +HC
Sbjct: 910 LKSIYCGTPALIKDKQLISLDDEYLHC 936
>ZFIN|ZDB-GENE-080723-57 [details] [associations]
symbol:lingo2 "leucine rich repeat and Ig domain
containing 2" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 ZFIN:ZDB-GENE-080723-57 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101682 HOVERGEN:HBG057546 CTD:158038
EMBL:CR788317 IPI:IPI00911397 RefSeq:NP_001139054.1
UniGene:Dr.111487 Ensembl:ENSDART00000102279 GeneID:564052
KEGG:dre:564052 OMA:STAMGCL NextBio:20885199 Uniprot:B8JIN1
Length = 607
Score = 208 (78.3 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 54/174 (31%), Positives = 88/174 (50%)
Query: 22 CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVH-YTLSFYIELRSLD 80
CP+RC+C SC L VP + E +++ L +NR+ V S + L LD
Sbjct: 27 CPARCECSVPTRSVSCHRRRLAQVPEGIPIETRSLDLSKNRLRIVTPQNFSSLLLLEELD 86
Query: 81 LSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKT 140
LS N ++ + ++F Q +L +L + N+++ L + GL EL LD+S N++ ++
Sbjct: 87 LSNNLLSSVEPNSFRAQPRLRSLRLRSNQLTLLPRGALAGLSELTLLDVSQNRLVILLDY 146
Query: 141 AFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNL 194
F + L +L LS N + + FS L SLR L L + VP + L++L
Sbjct: 147 GFEEQRRLRVLELSDNELVFIAP-RAFSGLASLRSLTLQRCNLSTVPTHALAHL 199
Score = 156 (60.0 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 71/305 (23%), Positives = 126/305 (41%)
Query: 123 ELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQ 182
E ++LDLS N++ ++ F L LE L LS NN+ + F + LR L+L +NQ
Sbjct: 57 ETRSLDLSKNRLRIVTPQNFSSLLLLEELDLS-NNLLSSVEPNSFRAQPRLRSLRLRSNQ 115
Query: 183 ILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXX 242
+ +P L+ L +L L +++N + +LD F L L L
Sbjct: 116 LTLLPRGALAGLSELTL--LDVSQNRLVILLDYGFE-EQRRLRVLELSDNELVFIAPRAF 172
Query: 243 VTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
L +L +PT L+ L L +L L + + + FK L LK ++++
Sbjct: 173 SGLASLRSLTLQRCNLSTVPTHALAHLHGLTSLRLRDLGIAELQAHTFKGLPRLKHLEVD 232
Query: 303 LIPNLDSIDQXXXXXXXXXXXXXXXXXAFSLTPLGT--LKCDRLDLSGNNFSNIDSVAFK 360
P L+ S+ P+ T L L+LS + + + +
Sbjct: 233 RWPLLEGFPTSALQGLNLSTLSITHTNLTSV-PVVTNLLYLTHLNLSYSRIRVLPAGWLR 291
Query: 361 SLFSLKLVKINLIPNLDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSL 420
+ L+++++ NL S++ +AF L + + N L L +F L+++ +
Sbjct: 292 GMDRLEVLRVRQA-NLLSVEPQAFQGASSLRILDLCYN-RLATLERSVFPVTEALQTLLI 349
Query: 421 KGNSL 425
N L
Sbjct: 350 GQNPL 354
Score = 119 (46.9 bits), Expect = 0.00092, P = 0.00092
Identities = 72/291 (24%), Positives = 116/291 (39%)
Query: 167 FSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHT 226
FSSL L L L NN + V N P L L L N + T+L L+ L
Sbjct: 76 FSSLLLLEELDLSNNLLSSVEPNSFRAQPR--LRSLRLRSNQL-TLLPRGALAGLSELTL 132
Query: 227 LALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNID 286
L + R L I + S L++L +L L N S +
Sbjct: 133 LDVSQNRLVILLDYGFEEQRRLRVLELSDNELVFIAPRAFSGLASLRSLTLQRCNLSTVP 192
Query: 287 SVAFKSLFSLKLVKI-NL-IPNLDSID-QXXXXXXXXXXXXXXXXXAFSLTPLGTLKCDR 343
+ A L L +++ +L I L + + F + L L
Sbjct: 193 THALAHLHGLTSLRLRDLGIAELQAHTFKGLPRLKHLEVDRWPLLEGFPTSALQGLNLST 252
Query: 344 LDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFVDNI-QLETVIINENMNLK 402
L ++ N +++ V +L L L +NL + + ++ + +LE + + + NL
Sbjct: 253 LSITHTNLTSVPVVT--NL--LYLTHLNLSYSRIRVLPAGWLRGMDRLEVLRVRQ-ANLL 307
Query: 403 QLPSKLFQGNTNLKSVSLKGNSLSHLEASHFPL-ERISFLDLSDNPLHCDC 452
+ + FQG ++L+ + L N L+ LE S FP+ E + L + NPL CDC
Sbjct: 308 SVEPQAFQGASSLRILDLCYNRLATLERSVFPVTEALQTLLIGQNPLVCDC 358
>RGD|1310957 [details] [associations]
symbol:Slitrk5 "SLIT and NTRK-like family, member 5"
species:10116 "Rattus norvegicus" [GO:0007268 "synaptic
transmission" evidence=ISO] [GO:0007409 "axonogenesis"
evidence=ISO] [GO:0007625 "grooming behavior" evidence=ISO]
[GO:0009410 "response to xenobiotic stimulus" evidence=ISO]
[GO:0021756 "striatum development" evidence=ISO] [GO:0030534 "adult
behavior" evidence=ISO] [GO:0043588 "skin development"
evidence=ISO] [GO:0048813 "dendrite morphogenesis" evidence=ISO]
[GO:0072358 "cardiovascular system development" evidence=ISO]
REFSEQ:NM_001107284 Ncbi:NP_001100754
Length = 958
Score = 169 (64.5 bits), Expect = 6.2e-09, P = 6.2e-09
Identities = 63/196 (32%), Positives = 93/196 (47%)
Query: 22 CPSRCQC----FDQKLEASCTDAGLE-VVPIQLNP-EVQTIILRENRISNVHYTLSFYIE 75
CP+ C C D L +C + +E + +Q P + + L EN I+ V T ++E
Sbjct: 374 CPTACTCNLQISDLGLNVNCQERKIESIAELQPKPYNPKKMYLTENYITVVRRT--DFLE 431
Query: 76 LRSLDL---SVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYN 132
LDL N+I+++ F L L ++ N I LS + F GL+ L+ L L YN
Sbjct: 432 ATGLDLLHLGNNRISMIQDRAFGDLGNLRRLYLNGNRIERLSPELFYGLQSLQYLFLQYN 491
Query: 133 KISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVP-NNVL 191
I I F +L+LL L+ NN S +FS L LR L L +N +P + VL
Sbjct: 492 LIREIQSGTFDPVPNLQLLFLN-NNQLQAMPSGVFSGLTLLR-LNLRSNSFTSLPVSGVL 549
Query: 192 SNLPHQSLHYLYLNEN 207
L SL + L++N
Sbjct: 550 DQLT--SLIQIDLHDN 563
Score = 143 (55.4 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 56/213 (26%), Positives = 97/213 (45%)
Query: 93 NFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLI 152
N + + LN+N +I ++++ K K + L+ N I+V+ +T F + L+LL
Sbjct: 381 NLQISDLGLNVNCQERKIESIAELQPKPYNP-KKMYLTENYITVVRRTDFLEATGLDLLH 439
Query: 153 LSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETV 212
L N I+ +D F L +LR L L+ N+I + + L QSL YL+L NLI +
Sbjct: 440 LGNNRISMIQD-RAFGDLGNLRRLYLNGNRIERLSPELFYGL--QSLQYLFLQYNLIREI 496
Query: 213 LDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQ-LSKLSA 271
+F + NL L L L TL ++P L +L++
Sbjct: 497 QSGTFD-PVPNLQLLFLNNNQLQAMPSGVFSGL-TLLRLNLRSNSFTSLPVSGVLDQLTS 554
Query: 272 LVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLI 304
L+ +DL N + V L+ ++ +K+ ++
Sbjct: 555 LIQIDLHDNPWDCTCEVVGMKLW-IEQLKVGVL 586
Score = 140 (54.3 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 58/204 (28%), Positives = 100/204 (49%)
Query: 21 ICPSRCQCFDQK--LEASCTDAGLEVVPIQLNPE---VQTIILRENRISNVHYTLSF--Y 73
IC + C C ++ L SC + G+ + +++P + ++L N ++ + Y F Y
Sbjct: 47 ICDNACPCEEKDGILTVSCENRGI-ISLSEISPPRFPIYHLLLSGNLLNRL-YPNEFVNY 104
Query: 74 IELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNK 133
L L N I + + F L L+++ N++ L DTF GL+ L+ L + YN
Sbjct: 105 TGASILHLGSNVIQDIETGAFHGLRGLRRLHLNNNKLELLRDDTFLGLENLEYLQVDYNY 164
Query: 134 ISVINKTAFRDTLH-LELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLS 192
ISVI AF LH L++LIL+ N ++ ++ +F R + L + LD+ N L
Sbjct: 165 ISVIEPNAF-GKLHMLQVLILNDNLLSGLPNN-LF------RFVPLTH---LDLRGNRLK 213
Query: 193 NLPHQSLHYLYLNENLIETVLDNS 216
LP+ L L + ++E L+ +
Sbjct: 214 LLPYVGL--LQHMDKVVELQLEEN 235
Score = 122 (48.0 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 44/124 (35%), Positives = 66/124 (53%)
Query: 336 LGTLKCDRLDLSGNNFSNIDSVAFKSLFSLK--LVKINLIPNLDS--IDQRAFVDNIQLE 391
LG L+ RL L+GN + F L SL+ ++ NLI + S D V N+QL
Sbjct: 456 LGNLR--RLYLNGNRIERLSPELFYGLQSLQYLFLQYNLIREIQSGTFDP---VPNLQL- 509
Query: 392 TVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFPLERISFL---DLSDNPL 448
+ +N N L+ +PS +F G T L+ ++L+ NS + L S L++++ L DL DNP
Sbjct: 510 -LFLNNNQ-LQAMPSGVFSGLTLLR-LNLRSNSFTSLPVSGV-LDQLTSLIQIDLHDNPW 565
Query: 449 HCDC 452
C C
Sbjct: 566 DCTC 569
Score = 90 (36.7 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 40/156 (25%), Positives = 60/156 (38%)
Query: 151 LILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIE 210
L+LS N + +E F + IL L +N I D+ L + L L+LN N +E
Sbjct: 86 LLLSGNLLNRLYPNE-FVNYTGASILHLGSNVIQDIETGAFHGL--RGLRRLHLNNNKLE 142
Query: 211 TVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLS 270
+ D++F L NL L + L L +P L +
Sbjct: 143 LLRDDTF-LGLENLEYLQVDYNYISVIEPNAFGKLHMLQVLILNDNLLSGLPNN-LFRFV 200
Query: 271 ALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN 306
L +LDL GN + V K+V++ L N
Sbjct: 201 PLTHLDLRGNRLKLLPYVGLLQHMD-KVVELQLEEN 235
Score = 54 (24.1 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 19/80 (23%), Positives = 37/80 (46%)
Query: 369 KINLIPNLDSIDQRA-FVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSH 427
K+ L N ++ +R F++ L+ + + N + + + F NL+ + L GN +
Sbjct: 413 KMYLTENYITVVRRTDFLEATGLDLLHLGNN-RISMIQDRAFGDLGNLRRLYLNGNRIER 471
Query: 428 LEASHF-PLERISFLDLSDN 446
L F L+ + +L L N
Sbjct: 472 LSPELFYGLQSLQYLFLQYN 491
>UNIPROTKB|E1B8X9 [details] [associations]
symbol:SLITRK5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007409 "axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 GeneTree:ENSGT00680000099775
OMA:HHRGPAL EMBL:DAAA02033829 EMBL:DAAA02033830 IPI:IPI00697816
Ensembl:ENSBTAT00000013364 Uniprot:E1B8X9
Length = 901
Score = 171 (65.3 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 63/196 (32%), Positives = 94/196 (47%)
Query: 22 CPSRCQC----FDQKLEASCTDAGLE-VVPIQLNP-EVQTIILRENRISNVHYTLSFYIE 75
CP+ C C D L +C + +E + +Q P + + L EN I+ V S ++E
Sbjct: 374 CPTACTCNLQISDLGLNVNCQERKIESIAELQPKPYNPKKMYLTENYIALVRR--SDFLE 431
Query: 76 LRSLDL---SVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYN 132
LDL N+I+++ F L L ++ N I LS + F GL+ L+ L L YN
Sbjct: 432 ATGLDLLHLGNNRISMIQDRAFGDLTNLRRLYLNGNRIERLSPELFYGLQSLQYLFLQYN 491
Query: 133 KISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVP-NNVL 191
I I F +L+LL L+ NN+ S +FS L LR L L +N +P + VL
Sbjct: 492 LIREIQPGTFDPVPNLQLLFLN-NNLLQTLPSGVFSGLTLLR-LNLRSNHFTSLPVSRVL 549
Query: 192 SNLPHQSLHYLYLNEN 207
L SL + L++N
Sbjct: 550 DQLT--SLIQIDLHDN 563
Score = 145 (56.1 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 64/223 (28%), Positives = 107/223 (47%)
Query: 3 YFLTCIFLILALT-KLNKAICPSRCQCFDQK--LEASCTDAGLEVVPIQLNPE---VQTI 56
+ LT + L A T IC + C C ++ L SC + G+ + +++P + +
Sbjct: 28 FALTSLVLSCAETIDYYGEICDNACPCEEKDGILTVSCENRGI-ISLSEISPPRFPIYHL 86
Query: 57 ILRENRISNVHYTLSF--YIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALS 114
+L N +S + Y F Y L L N I + + F L L+++ N++ L
Sbjct: 87 LLSGNLLSRL-YPNEFVNYTGASILHLGSNVIQDIETGAFHGLRGLRRLHLNNNKLELLR 145
Query: 115 KDTFKGLKELKTLDLSYNKISVINKTAFRDTLHL-ELLILSFNNITYFEDSEIFSSLKSL 173
DTF GL+ L+ L + YN ISVI AF LHL ++LIL+ N ++ ++ +F
Sbjct: 146 DDTFLGLESLEYLQVDYNYISVIEPNAF-GKLHLLQVLILNDNLLSSLPNN-LF------ 197
Query: 174 RILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNS 216
R + L + LD+ N L LP+ L L + ++E L+ +
Sbjct: 198 RFVPLTH---LDLRGNRLKLLPYVGL--LQHMDKVVELQLEEN 235
Score = 139 (54.0 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 54/201 (26%), Positives = 91/201 (45%)
Query: 93 NFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLI 152
N + + LN+N +I ++++ K K + L+ N I+++ ++ F + L+LL
Sbjct: 381 NLQISDLGLNVNCQERKIESIAELQPKPYNP-KKMYLTENYIALVRRSDFLEATGLDLLH 439
Query: 153 LSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETV 212
L N I+ +D F L +LR L L+ N+I + + L QSL YL+L NLI +
Sbjct: 440 LGNNRISMIQD-RAFGDLTNLRRLYLNGNRIERLSPELFYGL--QSLQYLFLQYNLIREI 496
Query: 213 LDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQ-LSKLSA 271
+F + NL L L L TL ++P + L +L++
Sbjct: 497 QPGTFD-PVPNLQLLFLNNNLLQTLPSGVFSGL-TLLRLNLRSNHFTSLPVSRVLDQLTS 554
Query: 272 LVNLDLSGNNFS-NIDSVAFK 291
L+ +DL N + D V K
Sbjct: 555 LIQIDLHDNPWDCTCDVVGMK 575
Score = 116 (45.9 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 40/118 (33%), Positives = 63/118 (53%)
Query: 343 RLDLSGNNFSNIDSVAFKSLFSLK--LVKINLIPNLD--SIDQRAFVDNIQLETVIINEN 398
RL L+GN + F L SL+ ++ NLI + + D V N+QL + +N N
Sbjct: 461 RLYLNGNRIERLSPELFYGLQSLQYLFLQYNLIREIQPGTFDP---VPNLQL--LFLNNN 515
Query: 399 MNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFPLERISFL---DLSDNPLHCDCN 453
+ L+ LPS +F G T L+ ++L+ N + L S L++++ L DL DNP C C+
Sbjct: 516 L-LQTLPSGVFSGLTLLR-LNLRSNHFTSLPVSRV-LDQLTSLIQIDLHDNPWDCTCD 570
Score = 114 (45.2 bits), Expect = 4.5e-10, Sum P(2) = 4.5e-10
Identities = 41/126 (32%), Positives = 59/126 (46%)
Query: 100 LLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNIT 159
+ +L +S N +S L + F L L N I I AF L L L+ N +
Sbjct: 83 IYHLLLSGNLLSRLYPNEFVNYTGASILHLGSNVIQDIETGAFHGLRGLRRLHLNNNKLE 142
Query: 160 YFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPF 219
D + F L+SL L++D N I + N L H L L LN+NL+ ++ +N F F
Sbjct: 143 LLRD-DTFLGLESLEYLQVDYNYISVIEPNAFGKL-HL-LQVLILNDNLLSSLPNNLFRF 199
Query: 220 T-LTNL 224
LT+L
Sbjct: 200 VPLTHL 205
Score = 61 (26.5 bits), Expect = 9.7e-08, Sum P(2) = 9.7e-08
Identities = 20/80 (25%), Positives = 39/80 (48%)
Query: 369 KINLIPNLDSIDQRA-FVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSH 427
K+ L N ++ +R+ F++ L+ + + N + + + F TNL+ + L GN +
Sbjct: 413 KMYLTENYIALVRRSDFLEATGLDLLHLGNN-RISMIQDRAFGDLTNLRRLYLNGNRIER 471
Query: 428 LEASHF-PLERISFLDLSDN 446
L F L+ + +L L N
Sbjct: 472 LSPELFYGLQSLQYLFLQYN 491
Score = 46 (21.3 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 39/170 (22%), Positives = 70/170 (41%)
Query: 261 IPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLK--LVKINLIPNL-----DSIDQX 313
I + L+ L L L+GN + F L SL+ ++ NLI + D +
Sbjct: 448 IQDRAFGDLTNLRRLYLNGNRIERLSPELFYGLQSLQYLFLQYNLIREIQPGTFDPVPNL 507
Query: 314 XXXXXXXXXXXXXXXXAFS-LTPLGTLKCDRLDLSGNNFSNID-SVAFKSLFSLKLVKIN 371
FS LT L RL+L N+F+++ S L SL + ++
Sbjct: 508 QLLFLNNNLLQTLPSGVFSGLTLL------RLNLRSNHFTSLPVSRVLDQLTSLIQIDLH 561
Query: 372 LIP---NLDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSV 418
P D + + +V+ QL+ ++ + + K P K + T+++S+
Sbjct: 562 DNPWDCTCDVVGMKLWVE--QLKAGVLVDEVICKA-PKKFAE--TDMRSI 606
>UNIPROTKB|Q6UXM1 [details] [associations]
symbol:LRIG3 "Leucine-rich repeats and immunoglobulin-like
domains protein 3" species:9606 "Homo sapiens" [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0030659 "cytoplasmic vesicle membrane"
evidence=IEA] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 InterPro:IPR025875 Pfam:PF12799 CleanEx:HS_LIG3
HOGENOM:HOG000113380 HOVERGEN:HBG052353 EMBL:AY505340 EMBL:AY358288
EMBL:AY358295 EMBL:AK074921 IPI:IPI00184265 IPI:IPI00640455
RefSeq:NP_001129523.1 RefSeq:NP_700356.2 UniGene:Hs.253736
ProteinModelPortal:Q6UXM1 SMR:Q6UXM1 STRING:Q6UXM1
PhosphoSite:Q6UXM1 DMDM:73621176 PaxDb:Q6UXM1 PRIDE:Q6UXM1
Ensembl:ENST00000320743 Ensembl:ENST00000379141 GeneID:121227
KEGG:hsa:121227 UCSC:uc001sqr.3 UCSC:uc009zqh.3 CTD:121227
GeneCards:GC12M059265 HGNC:HGNC:30991 HPA:HPA010773 MIM:608870
neXtProt:NX_Q6UXM1 PharmGKB:PA134864136 InParanoid:Q6UXM1
OMA:SHHQFVT OrthoDB:EOG4K6G3K PhylomeDB:Q6UXM1 GenomeRNAi:121227
NextBio:80680 ArrayExpress:Q6UXM1 Bgee:Q6UXM1 CleanEx:HS_LRIG3
Genevestigator:Q6UXM1 GermOnline:ENSG00000139263 Uniprot:Q6UXM1
Length = 1119
Score = 211 (79.3 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 110/416 (26%), Positives = 177/416 (42%)
Query: 22 CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSFYIE-LRSLD 80
CP+ C+C L+ C+ L +P L V + L NR+S + + +++ LR +
Sbjct: 47 CPTTCRCLGDLLD--CSRKRLARLPEPLPSWVARLDLSHNRLSFIKASSMSHLQSLREVK 104
Query: 81 LSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKT 140
L+ N++ + + N L L+++ N I + + K + L+TLDLS N IS + +T
Sbjct: 105 LNNNELETIPNLGPVSANITL-LSLAGNRIVEILPEHLKEFQSLETLDLSSNNISEL-QT 162
Query: 141 AFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLH 200
AF L L+ L L+ N +T E + +L +LKL+ N+I +P + LP L
Sbjct: 163 AF-PALQLKYLYLNSNRVTSMEPGYFDNLANTLLVLKLNRNRISAIPPKMFK-LPQ--LQ 218
Query: 201 YLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXA 260
+L LN N I+ V +F L L +L + L +
Sbjct: 219 HLELNRNKIKNVDGLTFQ-GLGALKSLKMQRNGVTKLMDGAFWGLSNMEILQLDHNNLTE 277
Query: 261 IPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQXXXXXXX 319
I L L L L LS N + I A++ F KL +++L N L +D
Sbjct: 278 ITKGWLYGLLMLQELHLSQNAINRISPDAWE--FCQKLSELDLTFNHLSRLDDSSFLGLS 335
Query: 320 XXXXXXXXXXAFSLTP------LGTLKCDRLDLSGNNFS-NIDSV--AFKSLFSLKLVKI 370
S L +LK LDL N S I+ + AF L L+ ++
Sbjct: 336 LLNTLHIGNNRVSYIADCAFRGLSSLKT--LDLKNNEISWTIEDMNGAFSGLDKLR--RL 391
Query: 371 NLIPN-LDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSL 425
L N + SI ++AF LE + +++N + L F L+ + L +SL
Sbjct: 392 ILQGNRIRSITKKAFTGLDALEHLDLSDNA-IMSLQGNAFSQMKKLQQLHLNTSSL 446
Score = 163 (62.4 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 79/305 (25%), Positives = 127/305 (41%)
Query: 127 LDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDV 186
LDLS+N++S I ++ L + L+ N + + S+ ++ +L L N+I+++
Sbjct: 79 LDLSHNRLSFIKASSMSHLQSLREVKLNNNELETIPNLGPVSA--NITLLSLAGNRIVEI 136
Query: 187 PNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTL- 245
L QSL L L+ N I L +FP L L L L
Sbjct: 137 LPEHLKEF--QSLETLDLSSNNISE-LQTAFP--ALQLKYLYLNSNRVTSMEPGYFDNLA 191
Query: 246 RTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIP 305
TL AIP K KL L +L+L+ N N+D + F+ L +LK +K+
Sbjct: 192 NTLLVLKLNRNRISAIPPKMF-KLPQLQHLELNRNKIKNVDGLTFQGLGALKSLKMQRNG 250
Query: 306 NLDSIDQXXXXXXXXXXXXXXXXXAFSLTP---LGTLKCDRLDLSGNNFSNIDSVAFKSL 362
+D +T G L L LS N + I A++
Sbjct: 251 VTKLMDGAFWGLSNMEILQLDHNNLTEITKGWLYGLLMLQELHLSQNAINRISPDAWE-- 308
Query: 363 FSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLK 421
F KL +++L N L +D +F+ L T+ I N + + F+G ++LK++ LK
Sbjct: 309 FCQKLSELDLTFNHLSRLDDSSFLGLSLLNTLHIGNN-RVSYIADCAFRGLSSLKTLDLK 367
Query: 422 GNSLS 426
N +S
Sbjct: 368 NNEIS 372
>UNIPROTKB|Q50L44 [details] [associations]
symbol:LINGO1 "Leucine-rich repeat and immunoglobulin-like
domain-containing nogo receptor-interacting protein 1" species:9031
"Gallus gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005154 "epidermal
growth factor receptor binding" evidence=IEA] [GO:0021954 "central
nervous system neuron development" evidence=IEA] [GO:0031175
"neuron projection development" evidence=IEA] [GO:0043491 "protein
kinase B signaling cascade" evidence=IEA] [GO:0048715 "negative
regulation of oligodendrocyte differentiation" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0043491 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00690000101682 OrthoDB:EOG40S0F8
EMBL:AB195262 IPI:IPI00607536 RefSeq:NP_001019748.1
UniGene:Gga.13113 HSSP:Q05793 ProteinModelPortal:Q50L44 SMR:Q50L44
STRING:Q50L44 Ensembl:ENSGALT00000004272 GeneID:415344
KEGG:gga:415344 CTD:84894 HOVERGEN:HBG057546 InParanoid:Q50L44
OMA:RIRDRKP NextBio:20818967 ArrayExpress:Q50L44 Uniprot:Q50L44
Length = 613
Score = 212 (79.7 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 78/284 (27%), Positives = 117/284 (41%)
Query: 22 CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYT-LSFYIELRSLD 80
CP RC+C Q+ C VVP + E + + L +NRI ++ + Y L L+
Sbjct: 35 CPPRCECSAQERAVLCHRKRFMVVPEGIPTETRQLDLGKNRIKTLNQDEFANYPHLEELE 94
Query: 81 LSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKT 140
L+ N I+ + F L L + N + + F GL L LD+S NKI ++
Sbjct: 95 LNENIISAIEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDY 154
Query: 141 AFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLH 200
F+D +L+ L + N++ Y FS L SL L L+ + +P LS+L H L
Sbjct: 155 MFQDLYNLKSLEVGDNDLVYISH-RAFSGLNSLEQLTLEKCNLTSIPTEALSHL-H-GLI 211
Query: 201 YLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXA 260
L L I + D SF L L L + + L +
Sbjct: 212 VLRLRHLNINAIRDYSFK-RLYRLKVLEISHWPYLDTMTSNCLYGLNLTSLSITHCNLTS 270
Query: 261 IPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLI 304
IP + L L L+LS N I+ L L+L +I L+
Sbjct: 271 IPYVSVRHLVYLRFLNLSYNPIVTIEGSMLHDL--LRLQEIQLV 312
Score = 145 (56.1 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 74/310 (23%), Positives = 128/310 (41%)
Query: 75 ELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKI 134
E R LDL N+I L F L L ++ N ISA+ F L L+TL L N++
Sbjct: 65 ETRQLDLGKNRIKTLNQDEFANYPHLEELELNENIISAIEPGAFNNLFNLRTLGLRSNRL 124
Query: 135 SVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNL 194
+I F +L L +S N I D +F L +L+ L++ +N ++ + + S L
Sbjct: 125 KLIPLGVFTGLSNLTKLDISENKIVILLDY-MFQDLYNLKSLEVGDNDLVYISHRAFSGL 183
Query: 195 PHQSLHYLYLNE-NLIETVLDNSFPF-TLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXX 252
SL L L + NL S P L++LH L + + + L+
Sbjct: 184 --NSLEQLTLEKCNL------TSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLK 235
Query: 253 XXXXXXXA-IPTKQLSKLSAL--VNLDLSGNNFSNIDSVAFKSLFSLKLVKI--NLIPNL 307
+ T + L L +L ++ N ++I V+ + L L+ + + N I +
Sbjct: 236 VLEISHWPYLDTMTSNCLYGLNLTSLSITHCNLTSIPYVSVRHLVYLRFLNLSYNPIVTI 295
Query: 308 DSI---DQXXXXXXXXXXXXXXXXXAFSLTPLGTLKCDRLDLSGNNFSNIDSVAFKSLFS 364
+ D F+ L L+ L++SGN + ++ AF S+ +
Sbjct: 296 EGSMLHDLLRLQEIQLVGGQLTTVEPFAFRGLNYLRI--LNVSGNLLTTLEESAFHSVGN 353
Query: 365 LKLVKINLIP 374
L+ + ++ P
Sbjct: 354 LETLILDNNP 363
Score = 40 (19.1 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 514 CSSPPDIKGLEVKAVPE 530
CS+P ++G E K P+
Sbjct: 389 CSTPEFVQGKEFKDFPD 405
>FB|FBgn0259677 [details] [associations]
symbol:CG42346 species:7227 "Drosophila melanogaster"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR003961 PROSITE:PS51450 SMART:SM00060 Gene3D:2.60.40.10
InterPro:IPR013783 EMBL:AE014298 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082
RefSeq:NP_001036306.2 UniGene:Dm.23593 ProteinModelPortal:Q0KHN6
SMR:Q0KHN6 GeneID:3355160 KEGG:dme:Dmel_CG42346 FlyBase:FBgn0259677
InParanoid:Q0KHN6 OMA:RHFSIPN OrthoDB:EOG40ZPCD PhylomeDB:Q0KHN6
GenomeRNAi:3355160 NextBio:850922 Bgee:Q0KHN6 Uniprot:Q0KHN6
Length = 1639
Score = 225 (84.3 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 107/425 (25%), Positives = 188/425 (44%)
Query: 43 EVVPIQLNPEVQTIILRENRISNVH-YTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLL 101
++ P + N + ++ L N + VH T S +++ + L N++ + F +L
Sbjct: 538 DIFPDE-NSSLLSVQLEANYLHKVHPRTFSRQQKVQIMWLKDNQLTRVERSFFADTPQLG 596
Query: 102 NLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYF 161
L +S N+I + KDTF L L+ LDLS N++ + + F LE L L+ N+I
Sbjct: 597 RLYLSDNKIRDIEKDTFVNLLLLQFLDLSGNQLRQLRRDYFAPLQDLEELSLARNHIEAI 656
Query: 162 EDSEIFSSLKSLRILKLDNNQILDVPNNVLSN-LPHQSLHYLYLNENLIETVLDNSFPFT 220
E F+ LK+L+ L L +N ++ + ++ SN P SL+ L + + ++F +
Sbjct: 657 E-GYAFAKLKNLKSLDLSHNPLVQLTRDIFSNEFPLNSLN---LGNCSLRKLEQHAFK-S 711
Query: 221 LTNLHTLALXXXXX--XXXXXXXXVTLRTL--HXXXXXXXXXXAIPTKQLSKLSALVNLD 276
LTNL+ L L LR L I L +L +L L
Sbjct: 712 LTNLNELNLERNQLNPADIQTLDIPNLRRLLLSHNNFSYAGSVGIMAGMLDRLRSLQQLS 771
Query: 277 LSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQXXXXXXXXXXXXXXXXXAFSLTP 335
+S + I + F + LV+++L N L I++ S P
Sbjct: 772 MSNCSLGQIPDLLFAK--NTNLVRLDLCDNRLTQINRNIFSGLNVFKELRLCRNELSDFP 829
Query: 336 ------LGTLKCDRLDLSGNNFSNIDSVAFKSLFSLK--LVKINLIPNLDSIDQRAFVDN 387
L TL + LDL+ N ++ID +L+ +++ N I L + V+
Sbjct: 830 HIALYNLSTL--ESLDLARNQLASIDFFKLSGTLNLRQLILRDNKITALSGFNA---VNL 884
Query: 388 IQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP---LERISFLDLS 444
QL++V ++ N+ L LP+ + + NL+ V L N + +S + R+S+L+L+
Sbjct: 885 TQLDSVDLSGNL-LLSLPANFLRHSINLQKVHLSNNRFLQIPSSALSDVSIPRLSWLNLT 943
Query: 445 DNPLH 449
NP++
Sbjct: 944 GNPIN 948
Score = 222 (83.2 bits), Expect = 4.5e-13, Sum P(2) = 4.5e-13
Identities = 107/453 (23%), Positives = 195/453 (43%)
Query: 9 FLILALTKLNKA----ICPSRCQCF--DQKLEASCTDAGLEVV-PIQLNPEVQTIILREN 61
F ++AL KL+ + +R F D +L + A V QL P + + L N
Sbjct: 234 FPLMALRKLDHLRILRLSNNRIPTFYGDIQLATNNASAAAAAVGAFQL-PSLIFLDLSSN 292
Query: 62 RISNVHYT-LSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKG 120
+ + + + +L++L N+I ++ F+ +L++L++S+N I L F+
Sbjct: 293 QFAEIGPDCFRAFPQLKTLSFYANQIELVQPEAFKSLRELMSLDMSHNRIIGLDPKVFEK 352
Query: 121 LKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDN 180
K L+T+DLS+N I I F + L + LS NNI ++ F++ ++ ++ L++
Sbjct: 353 NKRLQTVDLSHNHIHTIGGV-FSNLPQLREVFLSENNILELP-ADAFTNSTNVDVIYLES 410
Query: 181 NQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXX 240
N I + NV S L + L +LYL N I + F + T L +L+L
Sbjct: 411 NAIAHIDPNVFSTLVN--LDHLYLRSNFIPLLPVTLFDKS-TKLTSLSLDNNEIQDLEIG 467
Query: 241 XXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVK 300
L L + L +L L + N+ +I+ AF +L +++ +
Sbjct: 468 MFRKLEHLREVRLHNNRIRRVRRGVFEPLPSLQELHIQKNSIEDIEPQAFHTLENMQHIN 527
Query: 301 I--NLIPNLDSI-DQXXXXXXXXXXXXXXXXXAFSLTPLGTLKCDRLDLSGNNFSNIDSV 357
+ N + L+ I T K + L N + ++
Sbjct: 528 LQDNQLTVLEDIFPDENSSLLSVQLEANYLHKVHPRTFSRQQKVQIMWLKDNQLTRVERS 587
Query: 358 AFKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLK 416
F + +L ++ L N + I++ FV+ + L+ + ++ N L+QL F +L+
Sbjct: 588 FFAD--TPQLGRLYLSDNKIRDIEKDTFVNLLLLQFLDLSGNQ-LRQLRRDYFAPLQDLE 644
Query: 417 SVSLKGNSLSHLEASHFP-LERISFLDLSDNPL 448
+SL N + +E F L+ + LDLS NPL
Sbjct: 645 ELSLARNHIEAIEGYAFAKLKNLKSLDLSHNPL 677
Score = 189 (71.6 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 100/421 (23%), Positives = 173/421 (41%)
Query: 42 LEVVPIQL---NPEVQTIILRENRISNVHYTLSFYIE-LRSLDLSVNKINVLGSHNFEYQ 97
+ ++P+ L + ++ ++ L N I ++ + +E LR + L N+I + FE
Sbjct: 437 IPLLPVTLFDKSTKLTSLSLDNNEIQDLEIGMFRKLEHLREVRLHNNRIRRVRRGVFEPL 496
Query: 98 NKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFN- 156
L L+I N I + F L+ ++ ++L N+++V+ + F D + LL +
Sbjct: 497 PSLQELHIQKNSIEDIEPQAFHTLENMQHINLQDNQLTVL-EDIFPDE-NSSLLSVQLEA 554
Query: 157 NITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNS 216
N + FS + ++I+ L +NQ+ V + ++ P L LYL++N I + ++
Sbjct: 555 NYLHKVHPRTFSRQQKVQIMWLKDNQLTRVERSFFADTPQ--LGRLYLSDNKIRDIEKDT 612
Query: 217 FPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLD 276
F L L L L L+ L AI +KL L +LD
Sbjct: 613 F-VNLLLLQFLDLSGNQLRQLRRDYFAPLQDLEELSLARNHIEAIEGYAFAKLKNLKSLD 671
Query: 277 LSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQXXXXXXXXXXXXXXXXXAFSLTPL 336
LS N + F + F L + + +L ++Q + +
Sbjct: 672 LSHNPLVQLTRDIFSNEFPLNSLNLGNC-SLRKLEQHAFKSLTNLNELNLERNQLNPADI 730
Query: 337 GTLKCD---RLDLSGNNFSNIDSVAFKS-----LFSLKLVKINLIPNLDSIDQRAFVDNI 388
TL RL LS NNFS SV + L SL+ + ++ +L I F N
Sbjct: 731 QTLDIPNLRRLLLSHNNFSYAGSVGIMAGMLDRLRSLQQLSMSNC-SLGQIPDLLFAKNT 789
Query: 389 QLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHL-EASHFPLERISFLDLSDNP 447
L + + +N L Q+ +F G K + L N LS + + L + LDL+ N
Sbjct: 790 NLVRLDLCDN-RLTQINRNIFSGLNVFKELRLCRNELSDFPHIALYNLSTLESLDLARNQ 848
Query: 448 L 448
L
Sbjct: 849 L 849
Score = 163 (62.4 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 60/183 (32%), Positives = 91/183 (49%)
Query: 51 PEVQTIILRENRISNVHYTLSF--YIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYN 108
P + + L N I+ + YT+ Y L+ L + +++L S +FE L +L++ N
Sbjct: 935 PRLSWLNLTGNPINRI-YTVKEERYPYLKELYICQTNLSILTSKDFEAFQALQHLHLVNN 993
Query: 109 EISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFS 168
I+ +S FK L L TLDLS N++ ++ K + L L +S N + +D E FS
Sbjct: 994 RITRISPGAFKSLTNLLTLDLSVNELEMLPKERLQGLRLLRFLNISHNTL---KDLEEFS 1050
Query: 169 -SLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDN-SFPFTLTNLHT 226
L ++ L L NQ+ + NL H L L+L N + TVL N +F F L LH
Sbjct: 1051 VDLLEMQTLDLSFNQLDRISKKTFRNL-HGLLE-LFLMGNRM-TVLSNDAFRF-LRKLHV 1106
Query: 227 LAL 229
L L
Sbjct: 1107 LDL 1109
Score = 149 (57.5 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 79/353 (22%), Positives = 140/353 (39%)
Query: 79 LDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVIN 138
LDL N++ + + F N L + NE+S L L++LDL+ N+++ I+
Sbjct: 794 LDLCDNRLTQINRNIFSGLNVFKELRLCRNELSDFPHIALYNLSTLESLDLARNQLASID 853
Query: 139 KTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQS 198
TL+L LIL N IT + L L + L N +L +P N L + +
Sbjct: 854 FFKLSGTLNLRQLILRDNKITALSGFNAVN-LTQLDSVDLSGNLLLSLPANFLRH--SIN 910
Query: 199 LHYLYLNENLIETVLDNSFP-FTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXX 257
L ++L+ N + ++ ++ L L L L
Sbjct: 911 LQKVHLSNNRFLQIPSSALSDVSIPRLSWLNLTGNPINRIYTVKEERYPYLKELYICQTN 970
Query: 258 XXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQXXXXX 317
+ +K AL +L L N + I AFKSL +L + ++ + L+ + +
Sbjct: 971 LSILTSKDFEAFQALQHLHLVNNRITRISPGAFKSLTNLLTLDLS-VNELEMLPKERLQG 1029
Query: 318 XXXXXXXXXXXXAFS-LTPLGT--LKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIP 374
L L+ LDLS N I F++L L +++ L+
Sbjct: 1030 LRLLRFLNISHNTLKDLEEFSVDLLEMQTLDLSFNQLDRISKKTFRNLHGL--LELFLMG 1087
Query: 375 N-LDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQG-NTNLKSVSLKGNSL 425
N + + AF +L + + +N + +P + + TNL+++ L+ N L
Sbjct: 1088 NRMTVLSNDAFRFLRKLHVLDLRKNY-FELVPLEPLRPLETNLRTLRLEENPL 1139
Score = 149 (57.5 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 106/468 (22%), Positives = 185/468 (39%)
Query: 6 TCIFLILALTKLNKAICPSRCQCFDQKLEASCTDA---GLEVVPIQLNPEVQTIILRENR 62
T I L L +++ I FD+ + + D G+ + +Q + L++N
Sbjct: 83 TAISLRSTLERISAPIHSLSIYDFDRSVTSLSQDVFQPGVHIRHLQFSHS-HLEALKDNS 141
Query: 63 ISNVHYTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLK 122
+ NV +L SL + K+ + S KL L+ YNEI + +F GL+
Sbjct: 142 LRNVRSSLE------SLSIVNGKLTQMPSRALSSMQKLTALDFDYNEIVRVDDYSFYGLR 195
Query: 123 ELKTLDLSYNKISVINKTAFRDTLH-LELLILSFNNITYFEDSEIFSSLKSLRILKLDNN 181
+ L++ N++ + + AF ++ + +S N + F + L LRIL+L NN
Sbjct: 196 -ISKLNMKGNRLQGMPEHAFAGLEECMQEIDVSENGLRTFPLMAL-RKLDHLRILRLSNN 253
Query: 182 QIL----DVP---NNVLS--------NLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHT 226
+I D+ NN + LP SL +L L+ N + + F L T
Sbjct: 254 RIPTFYGDIQLATNNASAAAAAVGAFQLP--SLIFLDLSSNQFAEIGPDCFR-AFPQLKT 310
Query: 227 LALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNID 286
L+ +LR L + K K L +DLS N+ I
Sbjct: 311 LSFYANQIELVQPEAFKSLRELMSLDMSHNRIIGLDPKVFEKNKRLQTVDLSHNHIHTIG 370
Query: 287 SVAFKSLFSLKLVKINLIPNLDSIDQXXXXXXXXXXXXXXXXXAFS-LTP--LGTL-KCD 342
V F +L L+ V ++ N+ + A + + P TL D
Sbjct: 371 GV-FSNLPQLREVFLSE-NNILELPADAFTNSTNVDVIYLESNAIAHIDPNVFSTLVNLD 428
Query: 343 RLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNL 401
L L N + F S KL ++L N + ++ F L V ++ N +
Sbjct: 429 HLYLRSNFIPLLPVTLFDK--STKLTSLSLDNNEIQDLEIGMFRKLEHLREVRLHNN-RI 485
Query: 402 KQLPSKLFQGNTNLKSVSLKGNSLSHLEASHF-PLERISFLDLSDNPL 448
+++ +F+ +L+ + ++ NS+ +E F LE + ++L DN L
Sbjct: 486 RRVRRGVFEPLPSLQELHIQKNSIEDIEPQAFHTLENMQHINLQDNQL 533
Score = 136 (52.9 bits), Expect = 0.00078, Sum P(2) = 0.00078
Identities = 87/387 (22%), Positives = 153/387 (39%)
Query: 76 LRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKIS 135
L SL+L + L H F+ L LN+ N+++ T + L+ L LS+N S
Sbjct: 691 LNSLNLGNCSLRKLEQHAFKSLTNLNELNLERNQLNPADIQTLD-IPNLRRLLLSHNNFS 749
Query: 136 VINKTAFR----DTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLD--NNQILDVPNN 189
D L L LS +N + + ++ + K+ +++LD +N++ + N
Sbjct: 750 YAGSVGIMAGMLDRLR-SLQQLSMSNCSLGQIPDLLFA-KNTNLVRLDLCDNRLTQINRN 807
Query: 190 VLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLH 249
+ S L L L N + + + L+ L +L L L
Sbjct: 808 IFSGL--NVFKELRLCRNELSDFPHIAL-YNLSTLESLDLARNQLASIDFFKLSGTLNLR 864
Query: 250 XXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LD 308
A+ L+ L ++DLSGN ++ + + S+ L K++L N
Sbjct: 865 QLILRDNKITALSGFNAVNLTQLDSVDLSGNLLLSLPANFLRH--SINLQKVHLSNNRFL 922
Query: 309 SIDQXXXXXXXXXXXXXXXXXAFSLTPLGTLKCDR------LDLSGNNFSNIDSVAFKSL 362
I + + T+K +R L + N S + S F++
Sbjct: 923 QIPSSALSDVSIPRLSWLNLTGNPINRIYTVKEERYPYLKELYICQTNLSILTSKDFEAF 982
Query: 363 FSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLK 421
+L+ ++L+ N + I AF L T+ ++ N L+ LP + QG L+ +++
Sbjct: 983 QALQ--HLHLVNNRITRISPGAFKSLTNLLTLDLSVN-ELEMLPKERLQGLRLLRFLNIS 1039
Query: 422 GNSLSHLEASHFPLERISFLDLSDNPL 448
N+L LE L + LDLS N L
Sbjct: 1040 HNTLKDLEEFSVDLLEMQTLDLSFNQL 1066
Score = 38 (18.4 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 5/14 (35%), Positives = 10/14 (71%)
Query: 509 LNNLKCSSPPDIKG 522
+N L+C P +++G
Sbjct: 1182 INYLRCEHPTELRG 1195
>ZFIN|ZDB-GENE-050506-80 [details] [associations]
symbol:lrrtm1 "leucine rich repeat transmembrane
neuronal 1" species:7955 "Danio rerio" [GO:0005515 "protein
binding" evidence=IPI] [GO:0042802 "identical protein binding"
evidence=IDA] InterPro:IPR001611 PROSITE:PS51450
ZFIN:ZDB-GENE-050506-80 InterPro:IPR003591 SMART:SM00369
GO:GO:0042802 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00700000104056 EMBL:CU076051 CTD:347730
HOGENOM:HOG000290681 HOVERGEN:HBG052362 KO:K16665 OMA:EPDLFHG
IPI:IPI00493041 RefSeq:XP_003197743.1 UniGene:Dr.12811
ProteinModelPortal:B8JKM0 IntAct:B8JKM0 Ensembl:ENSDART00000133917
GeneID:570385 KEGG:dre:570385 NextBio:20890105 ArrayExpress:B8JKM0
Bgee:B8JKM0 Uniprot:B8JKM0
Length = 524
Score = 206 (77.6 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 78/299 (26%), Positives = 120/299 (40%)
Query: 5 LTCIFLILALTKLNKAICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRIS 64
L + ++L + L CP C+C D K + C L +P L+ + + LREN IS
Sbjct: 24 LCSLGIVLKIVPLVGGSCPRLCRC-DNK-QLYCEGLNLTDIPQNLSSAIG-LSLRENNIS 80
Query: 65 NVHY-TLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKE 123
+ +L L L N I ++ FE ++ L++S N I +L TF+ L
Sbjct: 81 ELREGNFVGLSQLTWLYLDHNNIEIVEESAFERLRRIKELDLSTNRIESLPNGTFRPLPN 140
Query: 124 LKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQI 183
L+ LDLSYN++ + F L L L +N + + IF +S++ L L NQ+
Sbjct: 141 LRILDLSYNRLQSLEPDLFHGLRKLTNLHLRYNALKFIP-VRIFQDCRSMQFLDLGYNQL 199
Query: 184 LDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXV 243
+ N + L L L+L N + V FP L +L TL +
Sbjct: 200 QSLARNSFAGL--FKLTELHLEHNELVKVNLAHFP-RLISLRTLYMRNNKATIVVNTLEW 256
Query: 244 TLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
T L I + L L L N + ID S SL + ++
Sbjct: 257 TWDYLEKIDFSNNEIEYIEPHVFESVPKLNTLMLDSNKLTYIDQRILDSWTSLSSITLS 315
Score = 186 (70.5 bits), Expect = 3.4e-11, P = 3.4e-11
Identities = 64/236 (27%), Positives = 107/236 (45%)
Query: 79 LDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVIN 138
L L N I+ L NF ++L L + +N I + + F+ L+ +K LDLS N+I +
Sbjct: 72 LSLRENNISELREGNFVGLSQLTWLYLDHNNIEIVEESAFERLRRIKELDLSTNRIESLP 131
Query: 139 KTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQS 198
FR +L +L LS+N + E ++F L+ L L L N + +P + + +S
Sbjct: 132 NGTFRPLPNLRILDLSYNRLQSLEP-DLFHGLRKLTNLHLRYNALKFIPVRIFQDC--RS 188
Query: 199 LHYLYLNENLIETVLDNSFP--FTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXX 256
+ +L L N ++++ NSF F LT LH ++LRTL+
Sbjct: 189 MQFLDLGYNQLQSLARNSFAGLFKLTELHLEHNELVKVNLAHFPRLISLRTLYMRNNKAT 248
Query: 257 XXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQ 312
+ T + + L +D S N I+ F+S+ L + ++ L IDQ
Sbjct: 249 I--VVNTLEWT-WDYLEKIDFSNNEIEYIEPHVFESVPKLNTLMLDS-NKLTYIDQ 300
Score = 179 (68.1 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 56/208 (26%), Positives = 97/208 (46%)
Query: 76 LRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKIS 135
++ LDLS N+I L + F L L++SYN + +L D F GL++L L L YN +
Sbjct: 117 IKELDLSTNRIESLPNGTFRPLPNLRILDLSYNRLQSLEPDLFHGLRKLTNLHLRYNALK 176
Query: 136 VINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLP 195
I F+D ++ L L +N + + F+ L L L L++N+++ V N L++ P
Sbjct: 177 FIPVRIFQDCRSMQFLDLGYNQLQSLARNS-FAGLFKLTELHLEHNELVKV-N--LAHFP 232
Query: 196 HQ-SLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXX 254
SL LY+ N T++ N+ +T L + ++ L+
Sbjct: 233 RLISLRTLYMRNNKA-TIVVNTLEWTWDYLEKIDFSNNEIEYIEPHVFESVPKLNTLMLD 291
Query: 255 XXXXXAIPTKQLSKLSALVNLDLSGNNF 282
I + L ++L ++ LSGN++
Sbjct: 292 SNKLTYIDQRILDSWTSLSSITLSGNDW 319
>UNIPROTKB|F1MUR6 [details] [associations]
symbol:RTN4RL2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046658 "anchored to plasma membrane" evidence=IEA]
[GO:0009986 "cell surface" evidence=IEA] [GO:0004872 "receptor
activity" evidence=IEA] GO:GO:0009986 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0004872
InterPro:IPR000372 SMART:SM00013 GO:GO:0046658
GeneTree:ENSGT00690000101803 OMA:WFREARV EMBL:DAAA02041755
EMBL:DAAA02041756 IPI:IPI00691427 Ensembl:ENSBTAT00000016755
Uniprot:F1MUR6
Length = 417
Score = 198 (74.8 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 60/207 (28%), Positives = 99/207 (47%)
Query: 7 CIFLILALTKLNKAICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNV 66
C+ L+L A CP C C+ SC VP L P Q + L+ N I +
Sbjct: 13 CVLLLLLAAAPAAARCPMLCTCYPAPPTVSCQANNFSAVPRALPPGTQRLFLQNNLIGAL 72
Query: 67 HYTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNE-ISALSKDTFKGLKELK 125
SF L +L L N ++ + F + L L++ N + +L DTF+GL+ L+
Sbjct: 73 RPG-SFGPSLLTLWLFSNNLSAIYPGTFRHLQALEELDLGDNRHLRSLEPDTFQGLERLQ 131
Query: 126 TLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILD 185
+L L ++S + T FR + L+ L L N++ + +D ++F+ L +L L L N++
Sbjct: 132 SLHLYRCQLSSLPGTIFRGLVSLQYLYLQENSLVHLQD-DLFADLANLSHLFLHGNRLRL 190
Query: 186 VPNNVLSNLPHQSLHYLYLNENLIETV 212
+ +V L SL L L+ N ++ V
Sbjct: 191 LTEHVFRGLG--SLDRLLLHGNRLQGV 215
Score = 123 (48.4 bits), Expect = 5.9e-05, Sum P(2) = 5.9e-05
Identities = 57/203 (28%), Positives = 80/203 (39%)
Query: 103 LNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFE 162
L + N I AL +F G L TL L N +S I FR LE L L N
Sbjct: 62 LFLQNNLIGALRPGSF-G-PSLLTLWLFSNNLSAIYPGTFRHLQALEELDLGDNRHLRSL 119
Query: 163 DSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLT 222
+ + F L+ L+ L L Q+ +P + L SL YLYL EN + + D+ F L
Sbjct: 120 EPDTFQGLERLQSLHLYRCQLSSLPGTIFRGLV--SLQYLYLQENSLVHLQDDLFA-DLA 176
Query: 223 NLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNF 282
NL L L L +L + L L L L N+
Sbjct: 177 NLSHLFLHGNRLRLLTEHVFRGLGSLDRLLLHGNRLQGVHRAAFRGLGRLTILYLFNNSL 236
Query: 283 SNIDSVAFKSLFSLKLVKINLIP 305
+++ A L SL+ +++N P
Sbjct: 237 ASLPGEALADLPSLEFLRLNANP 259
Score = 117 (46.2 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 41/132 (31%), Positives = 61/132 (46%)
Query: 76 LRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKIS 135
L+SL L +++ L F L L + N + L D F L L L L N++
Sbjct: 130 LQSLHLYRCQLSSLPGTIFRGLVSLQYLYLQENSLVHLQDDLFADLANLSHLFLHGNRLR 189
Query: 136 VINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLP 195
++ + FR L+ L+L N + + F L L IL L NN + +P L++LP
Sbjct: 190 LLTEHVFRGLGSLDRLLLHGNRLQGVHRAA-FRGLGRLTILYLFNNSLASLPGEALADLP 248
Query: 196 HQSLHYLYLNEN 207
SL +L LN N
Sbjct: 249 --SLEFLRLNAN 258
Score = 48 (22.0 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 7/21 (33%), Positives = 17/21 (80%)
Query: 510 NNLKCSSPPDIKGLEVKAVPE 530
+++ C+SPP+ +G +++A+ E
Sbjct: 281 SDVTCASPPERRGRDLRALRE 301
>UNIPROTKB|F1RQ64 [details] [associations]
symbol:LOC100525800 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0007409 "axonogenesis" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 GeneTree:ENSGT00680000099775
OMA:TVFVAFC EMBL:CU928352 RefSeq:XP_003135482.1
Ensembl:ENSSSCT00000023710 Ensembl:ENSSSCT00000034435
GeneID:100525800 KEGG:ssc:100525800 Uniprot:F1RQ64
Length = 838
Score = 148 (57.2 bits), Expect = 2.2e-13, Sum P(3) = 2.2e-13
Identities = 53/173 (30%), Positives = 81/173 (46%)
Query: 21 ICPSRCQCF--DQKLEASCTDAGLEVVPIQLNPEVQTII-LR-ENRISNVHYTLSF--YI 74
IC + C C + L +C + P QL P L +N N+ Y +F +
Sbjct: 26 IC-NVCSCVSVENVLYVNCEKVSV-YRPNQLKPPWSNFYHLNFQNNFLNILYPNTFLNFS 83
Query: 75 ELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKI 134
SL L NK+ + F + L L+++ NE+ L DTF G++ L+ L YN I
Sbjct: 84 HAVSLQLGNNKLQNIEGGAFLGLSALKQLHLNNNELKILRADTFLGIENLEYLQADYNLI 143
Query: 135 SVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVP 187
I + AF L++LIL+ N I++ D+ IF SL L + N+I +P
Sbjct: 144 KYIERGAFNKLHKLKVLILNDNLISFLPDN-IFR-FASLTHLDIRGNRIQKLP 194
Score = 142 (55.0 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 60/198 (30%), Positives = 88/198 (44%)
Query: 22 CPSRCQC----FDQKLEASCTDAGL----EVVPIQLNPEVQTIILRENRISNVHYTLSFY 73
CP+ C C D L +C + + E++P N + + + N I +V +S +
Sbjct: 342 CPAPCFCKTHPSDLGLSVNCQEKNIQSMSELIPKPFN--AKKLHVNGNSIKDVD--ISDF 397
Query: 74 IELRSLDL---SVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLS 130
E LDL N+I + F L L ++ N+I L + F GL L+ L L
Sbjct: 398 AEFEGLDLLHLGSNQIAAIKGDVFHNLTNLRRLYLNGNQIERLYPEIFSGLHNLQYLYLE 457
Query: 131 YNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVP-NN 189
YN I I F +L+LL L+ NN+ IFS R L L NN+ + +P +
Sbjct: 458 YNLIKEILAGTFDSMPNLQLLYLN-NNLLKSLPVYIFSGAPLAR-LNLRNNKFMYLPVSG 515
Query: 190 VLSNLPHQSLHYLYLNEN 207
VL L QSL + L N
Sbjct: 516 VLDQL--QSLTQIDLEGN 531
Score = 132 (51.5 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
Identities = 37/132 (28%), Positives = 66/132 (50%)
Query: 79 LDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVIN 138
L+ N +N+L + F + ++L + N++ + F GL LK L L+ N++ ++
Sbjct: 64 LNFQNNFLNILYPNTFLNFSHAVSLQLGNNKLQNIEGGAFLGLSALKQLHLNNNELKILR 123
Query: 139 KTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQS 198
F +LE L +N I Y E F+ L L++L L++N I +P+N+ S
Sbjct: 124 ADTFLGIENLEYLQADYNLIKYIERGA-FNKLHKLKVLILNDNLISFLPDNIFR---FAS 179
Query: 199 LHYLYLNENLIE 210
L +L + N I+
Sbjct: 180 LTHLDIRGNRIQ 191
Score = 130 (50.8 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 59/204 (28%), Positives = 92/204 (45%)
Query: 101 LNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITY 160
L++N I ++S+ K K L ++ N I ++ + F + L+LL L N I
Sbjct: 357 LSVNCQEKNIQSMSELIPKPFNA-KKLHVNGNSIKDVDISDFAEFEGLDLLHLGSNQIAA 415
Query: 161 FEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFT 220
+ ++F +L +LR L L+ NQI + + S L H +L YLYL NLI+ +L +F +
Sbjct: 416 IK-GDVFHNLTNLRRLYLNGNQIERLYPEIFSGL-H-NLQYLYLEYNLIKEILAGTFD-S 471
Query: 221 LTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQ-LSKLSALVNLDLSG 279
+ NL L L + L +P L +L +L +DL G
Sbjct: 472 MPNLQLLYLNNNLLKSLPVYIF-SGAPLARLNLRNNKFMYLPVSGVLDQLQSLTQIDLEG 530
Query: 280 NNFS-NIDSVAFKSLFSLKLVKIN 302
N + D VA K L L K+N
Sbjct: 531 NPWDCTCDLVALK----LWLEKLN 550
Score = 119 (46.9 bits), Expect = 3.0e-10, Sum P(3) = 3.0e-10
Identities = 39/124 (31%), Positives = 61/124 (49%)
Query: 102 NLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYF 161
+LN N ++ L +TF +L L NK+ I AF L+ L L+ N +
Sbjct: 63 HLNFQNNFLNILYPNTFLNFSHAVSLQLGNNKLQNIEGGAFLGLSALKQLHLNNNELKIL 122
Query: 162 EDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPF-T 220
++ F +++L L+ D N I + + L H+ L L LN+NLI + DN F F +
Sbjct: 123 R-ADTFLGIENLEYLQADYNLIKYIERGAFNKL-HK-LKVLILNDNLISFLPDNIFRFAS 179
Query: 221 LTNL 224
LT+L
Sbjct: 180 LTHL 183
Score = 104 (41.7 bits), Expect = 2.2e-13, Sum P(3) = 2.2e-13
Identities = 35/117 (29%), Positives = 58/117 (49%)
Query: 343 RLDLSGNNFSNIDSVAFKSLFSLKLVKI--NLIPNL--DSIDQRAFVDNIQLETVIINEN 398
RL L+GN + F L +L+ + + NLI + + D + N+QL + +N N
Sbjct: 429 RLYLNGNQIERLYPEIFSGLHNLQYLYLEYNLIKEILAGTFDS---MPNLQL--LYLNNN 483
Query: 399 MNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHF--PLERISFLDLSDNPLHCDCN 453
+ LK LP +F G L ++L+ N +L S L+ ++ +DL NP C C+
Sbjct: 484 L-LKSLPVYIFSG-APLARLNLRNNKFMYLPVSGVLDQLQSLTQIDLEGNPWDCTCD 538
Score = 72 (30.4 bits), Expect = 3.8e-10, Sum P(3) = 3.8e-10
Identities = 25/107 (23%), Positives = 52/107 (48%)
Query: 343 RLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFVDNIQLETVIINENMNLK 402
+L ++GN+ ++D F L L+ + + +I F + L + +N N ++
Sbjct: 381 KLHVNGNSIKDVDISDFAEFEGLDLLHLGS-NQIAAIKGDVFHNLTNLRRLYLNGNQ-IE 438
Query: 403 QLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPL 448
+L ++F G NL+ + L+ N + + A F + + L L++N L
Sbjct: 439 RLYPEIFSGLHNLQYLYLEYNLIKEILAGTFDSMPNLQLLYLNNNLL 485
Score = 61 (26.5 bits), Expect = 4.9e-09, Sum P(3) = 4.9e-09
Identities = 27/107 (25%), Positives = 47/107 (43%)
Query: 344 LDLSGN-NFSNIDSVA--FKSLFSLKLVKINLIPNLDSIDQRAFVDNIQLETVIINENMN 400
L LS N NI S++ F+ K + +N ++ +D F + L+ + + N
Sbjct: 355 LGLSVNCQEKNIQSMSELIPKPFNAKKLHVNG-NSIKDVDISDFAEFEGLDLLHLGSNQ- 412
Query: 401 LKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDN 446
+ + +F TNL+ + L GN + L F L + +L L N
Sbjct: 413 IAAIKGDVFHNLTNLRRLYLNGNQIERLYPEIFSGLHNLQYLYLEYN 459
Score = 61 (26.5 bits), Expect = 0.00024, Sum P(3) = 0.00024
Identities = 32/153 (20%), Positives = 59/153 (38%)
Query: 154 SFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVL 213
+F NI Y FS SL+ L NN++ ++ L +L L+LN N ++ +
Sbjct: 69 NFLNILYPNTFLNFSHAVSLQ---LGNNKLQNIEGGAFLGL--SALKQLHLNNNELKILR 123
Query: 214 DNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALV 273
++F + NL L L L +P + + ++L
Sbjct: 124 ADTF-LGIENLEYLQADYNLIKYIERGAFNKLHKLKVLILNDNLISFLPDN-IFRFASLT 181
Query: 274 NLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN 306
+LD+ GN + + ++V++ L N
Sbjct: 182 HLDIRGNRIQKLPYIGVLEHIG-RVVELQLEDN 213
Score = 53 (23.7 bits), Expect = 3.1e-08, Sum P(3) = 3.1e-08
Identities = 14/53 (26%), Positives = 26/53 (49%)
Query: 397 ENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPL 448
+ N++ + S+L N K + + GNS+ ++ S F E + L L N +
Sbjct: 362 QEKNIQSM-SELIPKPFNAKKLHVNGNSIKDVDISDFAEFEGLDLLHLGSNQI 413
Score = 51 (23.0 bits), Expect = 2.2e-13, Sum P(3) = 2.2e-13
Identities = 9/29 (31%), Positives = 18/29 (62%)
Query: 507 IVLNNLKCSSPPDIKGLEVKAVPENSVHC 535
IV+ L+C +P +E+K++ +N + C
Sbjct: 553 IVVKELRCETPVQFANIELKSL-KNEILC 580
>FB|FBgn0034083 [details] [associations]
symbol:lbk "lambik" species:7227 "Drosophila melanogaster"
[GO:0048477 "oogenesis" evidence=IMP] [GO:0008407 "chaeta
morphogenesis" evidence=IMP] InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 EMBL:AE013599 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101816 RefSeq:NP_611091.2
ProteinModelPortal:A1ZAB1 SMR:A1ZAB1 STRING:A1ZAB1 PaxDb:A1ZAB1
EnsemblMetazoa:FBtr0302084 GeneID:36788 KEGG:dme:Dmel_CG8434
UCSC:CG8434-RA CTD:36788 FlyBase:FBgn0034083 eggNOG:NOG329771
InParanoid:A1ZAB1 OMA:LEINWST OrthoDB:EOG4T4B98 GenomeRNAi:36788
NextBio:800384 Bgee:A1ZAB1 Uniprot:A1ZAB1
Length = 1252
Score = 221 (82.9 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 78/283 (27%), Positives = 133/283 (46%)
Query: 22 CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYT-LSFYIELRSLD 80
CP C+C + + C LE VP+ L VQT+ L N++++ + + L +
Sbjct: 265 CPKDCKCLNVLFD--CDKLHLERVPV-LPSYVQTLHLANNKLNDTTVLEIRNLLNLTKVS 321
Query: 81 LSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKT 140
L N + V+ F + L +L ++ N I+++S ++ L L+TLDLS NK+ I
Sbjct: 322 LKRNLLEVIPK--FIGLSGLKHLVLANNHITSISSESLAALPLLRTLDLSRNKLHTIELN 379
Query: 141 AFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLH 200
+F + +L LILSFN IT + F++L +L L+L NN++ +P V NL L
Sbjct: 380 SFPKSNNLVHLILSFNEITNVNEHS-FATLNNLTDLELSNNRLSTLPIRVFKNL--NQLK 436
Query: 201 YLYLNENLIETVLDNSFPFT-LTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXX 259
L LN N +E N F L ++ L L + +
Sbjct: 437 KLALNFNQLEI---NWSTFRGLESMKNLQLKSNKIRALQDGVFYVMHKIETIDLAMNQIS 493
Query: 260 AIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
++ + L L+ L +L+LS N S I+ ++ SL+++ ++
Sbjct: 494 SLSRQGLFNLTKLRHLNLSFNAISRIEVDTWEFTQSLEVLDLS 536
Score = 194 (73.4 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 71/268 (26%), Positives = 131/268 (48%)
Query: 42 LEVVP--IQLNPEVQTIILRENRISNVHY-TLSFYIELRSLDLSVNKINVLGSHNFEYQN 98
LEV+P I L+ ++ ++L N I+++ +L+ LR+LDLS NK++ + ++F N
Sbjct: 327 LEVIPKFIGLSG-LKHLVLANNHITSISSESLAALPLLRTLDLSRNKLHTIELNSFPKSN 385
Query: 99 KLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNI 158
L++L +S+NEI+ +++ +F L L L+LS N++S + F++ L+ L L+FN +
Sbjct: 386 NLVHLILSFNEITNVNEHSFATLNNLTDLELSNNRLSTLPIRVFKNLNQLKKLALNFNQL 445
Query: 159 TYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFP 218
+ F L+S++ L+L +N+I + + V + H+ + + L N I + L
Sbjct: 446 EI--NWSTFRGLESMKNLQLKSNKIRALQDGVFYVM-HK-IETIDLAMNQISS-LSRQGL 500
Query: 219 FTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLS 278
F LT L L L ++L + L L L L+L+
Sbjct: 501 FNLTKLRHLNLSFNAISRIEVDTWEFTQSLEVLDLSNNAINEFKPQHLDCLHRLKTLNLA 560
Query: 279 GNNFSNIDSVAFKSLFSLKLVKINLIPN 306
N + F + +L+ ++NL N
Sbjct: 561 HNRLQYLQENTFDCVKNLE--ELNLRRN 586
Score = 166 (63.5 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 51/175 (29%), Positives = 87/175 (49%)
Query: 52 EVQTIILRENRISNVHYTLSFYI-ELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEI 110
+++TI L N+IS++ F + +LR L+LS N I+ + +E+ L L++S N I
Sbjct: 481 KIETIDLAMNQISSLSRQGLFNLTKLRHLNLSFNAISRIEVDTWEFTQSLEVLDLSNNAI 540
Query: 111 SALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYF-EDSEI--- 166
+ L LKTL+L++N++ + + F +LE L L N +++ ED
Sbjct: 541 NEFKPQHLDCLHRLKTLNLAHNRLQYLQENTFDCVKNLEELNLRRNRLSWIIEDQSAAAP 600
Query: 167 FSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTL 221
F L+ LR L L N + + +S L +L L L N + ++ N+F L
Sbjct: 601 FKGLRKLRRLDLHGNNLKQISTKAMSGL--NNLEILNLGSNALASIQVNAFEHML 653
Score = 138 (53.6 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 100/394 (25%), Positives = 167/394 (42%)
Query: 76 LRSLDLSVNKINVLGSHNFEYQNKLLNL---NISYNEISALSKDTFKGLKELKTLDLSYN 132
+++L L+ NK+N + E +N LLNL ++ N + + K F GL LK L L+ N
Sbjct: 293 VQTLHLANNKLN--DTTVLEIRN-LLNLTKVSLKRNLLEVIPK--FIGLSGLKHLVLANN 347
Query: 133 KISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLS 192
I+ I+ + L L LS N + E + F +L L L N+I +V + +
Sbjct: 348 HITSISSESLAALPLLRTLDLSRNKLHTIELNS-FPKSNNLVHLILSFNEITNVNEHSFA 406
Query: 193 NLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXX 252
L +L L L+ N + T+ F L L LAL L ++
Sbjct: 407 TL--NNLTDLELSNNRLSTLPIRVFK-NLNQLKKLALNFNQLEINWSTFR-GLESMKNLQ 462
Query: 253 XXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSL-KLVKINLIPN-LDSI 310
A+ + + +DL+ N S S++ + LF+L KL +NL N + I
Sbjct: 463 LKSNKIRALQDGVFYVMHKIETIDLAMNQIS---SLSRQGLFNLTKLRHLNLSFNAISRI 519
Query: 311 DQXXXXXXXXXXXXXXXXXAFSLTPLGTLKC----DRLDLSGNNFSNIDSVAFKSLFSLK 366
+ A + L C L+L+ N + F + +L+
Sbjct: 520 EVDTWEFTQSLEVLDLSNNAINEFKPQHLDCLHRLKTLNLAHNRLQYLQENTFDCVKNLE 579
Query: 367 LVKINLIPN-LDSI--DQRA---FVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSL 420
++NL N L I DQ A F +L + ++ N NLKQ+ +K G NL+ ++L
Sbjct: 580 --ELNLRRNRLSWIIEDQSAAAPFKGLRKLRRLDLHGN-NLKQISTKAMSGLNNLEILNL 636
Query: 421 KGNSLSHLEASHFP-LERISFLDLSDNPLHCDCN 453
N+L+ ++ + F + R++ L CDC+
Sbjct: 637 GSNALASIQVNAFEHMLRLNKLVFKSLNFICDCD 670
Score = 39 (18.8 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 380 DQRAFVDNIQLETVIINENMN 400
+ R F +Q E V++ EN+N
Sbjct: 1015 NSRTFT--LQSELVVVKENLN 1033
>UNIPROTKB|Q6WRI0 [details] [associations]
symbol:IGSF10 "Immunoglobulin superfamily member 10"
species:9606 "Homo sapiens" [GO:0001503 "ossification"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] InterPro:IPR007110
PROSITE:PS50835 GO:GO:0007275 GO:GO:0005576 GO:GO:0030154
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0042246
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GO:GO:0001503 HSSP:Q9BZR6 EMBL:AY273815 EMBL:AK093069 EMBL:AK098838
EMBL:BC031063 IPI:IPI00183913 IPI:IPI00478293 IPI:IPI00795608
RefSeq:NP_001171616.1 RefSeq:NP_001171617.1 RefSeq:NP_849144.2
UniGene:Hs.741587 ProteinModelPortal:Q6WRI0 SMR:Q6WRI0
STRING:Q6WRI0 PhosphoSite:Q6WRI0 DMDM:74749492 PaxDb:Q6WRI0
PRIDE:Q6WRI0 Ensembl:ENST00000282466 GeneID:285313 KEGG:hsa:285313
UCSC:uc011bob.2 UCSC:uc011boc.2 UCSC:uc011bod.2 CTD:285313
GeneCards:GC03M151143 HGNC:HGNC:26384 HPA:HPA012921
neXtProt:NX_Q6WRI0 PharmGKB:PA134900760 eggNOG:NOG239806
HOGENOM:HOG000113014 HOVERGEN:HBG107995 InParanoid:Q6WRI0
OMA:PYVSEDG OrthoDB:EOG45MN4F PhylomeDB:Q6WRI0 GenomeRNAi:285313
NextBio:95425 ArrayExpress:Q6WRI0 Bgee:Q6WRI0 CleanEx:HS_IGSF10
Genevestigator:Q6WRI0 Uniprot:Q6WRI0
Length = 2623
Score = 226 (84.6 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 66/204 (32%), Positives = 98/204 (48%)
Query: 5 LTCI---FLILAL--TKLNKAICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILR 59
+TC+ F ++ L T KA CP RC C+ E CT L +P + P V+ I L
Sbjct: 8 ITCLLVSFAVICLVATPGGKA-CPRRCACY-MPTEVHCTFRYLTSIPDSIPPNVERINLG 65
Query: 60 ENRISNVHYT-LSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTF 118
N + + T S +L L L N I+ + F L L +SYN++ L KDTF
Sbjct: 66 YNSLVRLMETDFSGLTKLELLMLHSNGIHTIPDKTFSDLQALQVLKMSYNKVRKLQKDTF 125
Query: 119 KGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKL 178
GL+ L L + +N I IN F L L+ L N +T + F SL L+I K+
Sbjct: 126 YGLRSLTRLHMDHNNIEFINPEVFYGLNFLRLVHLEGNQLTKLHP-DTFVSLSYLQIFKI 184
Query: 179 DNNQILDVPNNVLSNLPHQSLHYL 202
+ L + +N L++LP + + Y+
Sbjct: 185 SFIKFLYLSDNFLTSLPQEMVSYM 208
Score = 41 (19.5 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 333 LTPLGTLKCDRLDLSGNNFSNIDSV 357
+ P G+L + D SGN + + S+
Sbjct: 310 MAPFGSLTLNMTDQSGNEANMVCSI 334
>MGI|MGI:1914123 [details] [associations]
symbol:Tril "TLR4 interactor with leucine-rich repeats"
species:10090 "Mus musculus" [GO:0001530 "lipopolysaccharide
binding" evidence=ISO] [GO:0002718 "regulation of cytokine
production involved in immune response" evidence=ISO] [GO:0006954
"inflammatory response" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0034142 "toll-like receptor 4 signaling pathway" evidence=ISO]
[GO:0045087 "innate immune response" evidence=IEA] [GO:0046696
"lipopolysaccharide receptor complex" evidence=ISO]
InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:1914123 GO:GO:0016021
GO:GO:0006954 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0045087 InterPro:IPR000372
SMART:SM00013 HSSP:Q9BZR6 GeneTree:ENSGT00700000104056 Pfam:PF01463
CTD:9865 HOVERGEN:HBG066060 EMBL:AK122338 EMBL:AK004681
EMBL:AK033401 EMBL:AK051421 EMBL:BC043099 EMBL:BC059224
IPI:IPI00469248 RefSeq:NP_080093.1 UniGene:Mm.422727
UniGene:Mm.475802 UniGene:Mm.480530 ProteinModelPortal:Q9DBY4
SMR:Q9DBY4 STRING:Q9DBY4 PRIDE:Q9DBY4 Ensembl:ENSMUST00000127748
GeneID:66873 KEGG:mmu:66873 UCSC:uc009bzk.2 OMA:EFPCDRF
OrthoDB:EOG4KWJSW NextBio:322893 Bgee:Q9DBY4 Genevestigator:Q9DBY4
Uniprot:Q9DBY4
Length = 809
Score = 208 (78.3 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 80/298 (26%), Positives = 130/298 (43%)
Query: 12 LALTKLNKAICPSRCQCFDQKLEASCTDAGLEVVPIQLN-PEVQTII---LRENRISNVH 67
LA +++CP RC C CT+ GL VP + P Q ++ L N I+N+
Sbjct: 17 LAFPPRAESVCPERCDC-QHPQHLLCTNRGLRAVPKTSSLPSPQDVLTYSLGGNFITNIT 75
Query: 68 YTLSFYI--ELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELK 125
F+ +LR LDL N+I L FE ++L L + N + AL T L++L+
Sbjct: 76 -AFDFHRLGQLRRLDLQYNQIRSLHPKTFEKLSRLEELYLGNNLLQALVPGTLAPLRKLR 134
Query: 126 TLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILD 185
L + N+I +++ +F L L L N + D+ +F+ L +L L L++N+I
Sbjct: 135 ILYANGNEIGRLSRGSFEGLESLVKLRLDGNVLGALPDA-VFAPLGNLLYLHLESNRIRF 193
Query: 186 VPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFT-LTNLHTLALXXXXXXXXXXXXXVT 244
+ N S L L +L L+ N ++ L ++ F L +L TL L
Sbjct: 194 LGKNAFSQLG--KLRFLNLSANELQPSLRHAATFVPLRSLSTLILSANSLQHLGPRVFQH 251
Query: 245 LRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
L L + + L AL L L GN + + + L SL+ + ++
Sbjct: 252 LPRLGLLSLSGNQLTHLAPEAFWGLEALRELRLEGNRLNQLPLTLLEPLHSLEALDLS 309
Score = 133 (51.9 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 78/305 (25%), Positives = 111/305 (36%)
Query: 157 NITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNS 216
NIT F+ F L LR L L NQI + L L LYL NL++ ++ +
Sbjct: 73 NITAFD----FHRLGQLRRLDLQYNQIRSLHPKTFEKLSR--LEELYLGNNLLQALVPGT 126
Query: 217 FPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLD 276
L L L L +L A+P + L L+ L
Sbjct: 127 LA-PLRKLRILYANGNEIGRLSRGSFEGLESLVKLRLDGNVLGALPDAVFAPLGNLLYLH 185
Query: 277 LSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQXXXXXXXXXXXXXXXXXAFSLTP 335
L N + AF L L+ +NL N L + A SL
Sbjct: 186 LESNRIRFLGKNAFSQLGKLRF--LNLSANELQPSLRHAATFVPLRSLSTLILSANSLQH 243
Query: 336 LGTL------KCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNI 388
LG + L LSGN +++ AF L +L+ ++ L N L+ +
Sbjct: 244 LGPRVFQHLPRLGLLSLSGNQLTHLAPEAFWGLEALR--ELRLEGNRLNQLPLTLLEPLH 301
Query: 389 QLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFPLERISF-LDLSDNP 447
LE + ++ N L L F L+ +SL+ N+LS L F + LDL N
Sbjct: 302 SLEALDLSGN-ELSALHPATFGHQGRLRELSLRDNALSALSGDIFAASPALYRLDLDGNG 360
Query: 448 LHCDC 452
CDC
Sbjct: 361 WTCDC 365
Score = 122 (48.0 bits), Expect = 0.00063, P = 0.00063
Identities = 42/139 (30%), Positives = 74/139 (53%)
Query: 73 YIELRSLD---LSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDL 129
++ LRSL LS N + LG F++ +L L++S N+++ L+ + F GL+ L+ L L
Sbjct: 225 FVPLRSLSTLILSANSLQHLGPRVFQHLPRLGLLSLSGNQLTHLAPEAFWGLEALRELRL 284
Query: 130 SYNKISVINKTAFRDTLH-LELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPN 188
N+++ + T + LH LE L LS N ++ + F LR L L +N + +
Sbjct: 285 EGNRLNQLPLTLL-EPLHSLEALDLSGNELSALHPAT-FGHQGRLRELSLRDNALSALSG 342
Query: 189 NVLSNLPHQSLHYLYLNEN 207
++ + P +L+ L L+ N
Sbjct: 343 DIFAASP--ALYRLDLDGN 359
>ZFIN|ZDB-GENE-040220-4 [details] [associations]
symbol:tlr21 "toll-like receptor 21" species:7955
"Danio rerio" [GO:0007165 "signal transduction" evidence=IEA]
[GO:0052033 "pathogen-associated molecular pattern dependent
induction by symbiont of host innate immune response" evidence=IDA]
Pfam:PF00560 InterPro:IPR000157 InterPro:IPR001611 Pfam:PF01582
PROSITE:PS50104 PROSITE:PS51450 SMART:SM00255
ZFIN:ZDB-GENE-040220-4 GO:GO:0007165 InterPro:IPR003591
SMART:SM00369 GO:GO:0005622 GO:GO:0052033 SUPFAM:SSF52200
GeneTree:ENSGT00680000099674 EMBL:BX571826 IPI:IPI00487094
RefSeq:NP_001186264.1 UniGene:Dr.161713 UniGene:Dr.85003
Ensembl:ENSDART00000060142 GeneID:402884 KEGG:dre:402884 CTD:402884
OMA:LTLDNSC NextBio:20816703 ArrayExpress:F1QMN8 Bgee:F1QMN8
Uniprot:F1QMN8
Length = 989
Score = 167 (63.8 bits), Expect = 3.2e-13, Sum P(2) = 3.2e-13
Identities = 49/149 (32%), Positives = 80/149 (53%)
Query: 78 SLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVI 137
+L +S + I + S +F++ L L + N I+ + KD F L L+TL+LS N IS +
Sbjct: 64 NLTISHSNIEYVQSQSFDHLPNLTALILDANHITNIDKDAFNNLHHLQTLNLSCNNISFL 123
Query: 138 NKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQ 197
++ F D +L L+L N +T D +FSSL +L+IL L N + + + V S
Sbjct: 124 HRDVFSDLHNLTQLLLGSNKLTN-PDKYLFSSLTNLKILDLRRNHLYNFSSVVESITNLT 182
Query: 198 SLHYLYLNENLIETVLDNS-FPFTLTNLH 225
SL L L+ N + T+ ++ P +L L+
Sbjct: 183 SLIKLDLSFNKLTTLQHSTHLPESLALLY 211
Score = 165 (63.1 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 73/269 (27%), Positives = 115/269 (42%)
Query: 51 PEVQTIILRENRISNV-HYTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNE 109
P+++ + L N I+ + H LS +L++L L N ++ + + +FE L LN+ NE
Sbjct: 407 PKLEILELNINIIAYMDHKALSGLKDLKTLRLDNNLLSDIYNDSFEDLTNLKTLNLRNNE 466
Query: 110 ISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSS 169
I+ + TF+ L +L LDL NKIS + AF L L L N++ D +F
Sbjct: 467 IAVIFNYTFQNLSKLDILDLGGNKISQLKPHAFDGLYSLTNLYLDRNHLKMI-DVVLFGK 525
Query: 170 LK-SLRILKLDNNQILDVPNNVLSNLPHQS-LHYLYLN---ENLIETVLDNSFPFTLTNL 224
L +L++L L N I+ + S + S L+ L LN N I +L +F LT+L
Sbjct: 526 LSGTLQVLDLQGNMIMYFTEHTHSPFKNMSRLYDLKLNGQQPNGIN-LLPRAFFRGLTSL 584
Query: 225 HTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQ--LSKLSALVNLDLSGNNF 282
+L L L+ L + L L L L
Sbjct: 585 KSLYLTNNHIIGFGDETFDDLKNLDYLTLDNSCAGVAQLQSGIFKSLQKLRTLSLENMGI 644
Query: 283 SNIDSVAFKSLFSLKLVKINLIPNLDSID 311
+ F +L LK + +N P + S+D
Sbjct: 645 KSFSKDVFGNLTGLKTLHLNRNPMM-SLD 672
Score = 153 (58.9 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 53/167 (31%), Positives = 83/167 (49%)
Query: 64 SNVHYTLSFYIE----LRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFK 119
SN+ Y S + L +L L N I + F + L LN+S N IS L +D F
Sbjct: 70 SNIEYVQSQSFDHLPNLTALILDANHITNIDKDAFNNLHHLQTLNLSCNNISFLHRDVFS 129
Query: 120 GLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDS-EIFSSLKSLRILKL 178
L L L L NK++ +K F +L++L L N++ F E ++L SL L L
Sbjct: 130 DLHNLTQLLLGSNKLTNPDKYLFSSLTNLKILDLRRNHLYNFSSVVESITNLTSLIKLDL 189
Query: 179 DNNQILDVPNNVLSNLPHQSLHYLYLNENLIETV-LDNSFPFTLTNL 224
N++ + ++ ++LP +SL LYL +N ++T+ D SF + L
Sbjct: 190 SFNKLTTLQHS--THLP-ESLALLYLGDNKLKTLGCDKSFLMNVKKL 233
Score = 148 (57.2 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 55/187 (29%), Positives = 90/187 (48%)
Query: 48 QLNPEVQTIILRENRISNVH-YTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNIS 106
+++ + + R NRI + Y S +L L+L++N I + L L +
Sbjct: 380 EIHNSLTNLSYRYNRILQISGYAFSNTPKLEILELNINIIAYMDHKALSGLKDLKTLRLD 439
Query: 107 YNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEI 166
N +S + D+F+ L LKTL+L N+I+VI F++ L++L L N I+ +
Sbjct: 440 NNLLSDIYNDSFEDLTNLKTLNLRNNEIAVIFNYTFQNLSKLDILDLGGNKISQLKP-HA 498
Query: 167 FSSLKSLRILKLDNNQI--LDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSF-PF-TLT 222
F L SL L LD N + +DV VL +L L L N+I +++ PF ++
Sbjct: 499 FDGLYSLTNLYLDRNHLKMIDV---VLFGKLSGTLQVLDLQGNMIMYFTEHTHSPFKNMS 555
Query: 223 NLHTLAL 229
L+ L L
Sbjct: 556 RLYDLKL 562
Score = 140 (54.3 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 43/127 (33%), Positives = 68/127 (53%)
Query: 101 LNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITY 160
LNL IS++ I + +F L L L L N I+ I+K AF + HL+ L LS NNI++
Sbjct: 63 LNLTISHSNIEYVQSQSFDHLPNLTALILDANHITNIDKDAFNNLHHLQTLNLSCNNISF 122
Query: 161 FEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFT 220
++FS L +L L L +N++ + + S+L + L L L N + +S +
Sbjct: 123 LH-RDVFSDLHNLTQLLLGSNKLTNPDKYLFSSLTN--LKILDLRRNHLYNF--SSVVES 177
Query: 221 LTNLHTL 227
+TNL +L
Sbjct: 178 ITNLTSL 184
Score = 114 (45.2 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 47/163 (28%), Positives = 75/163 (46%)
Query: 29 FDQKLEASCTDAGLEVVPIQLN---PEVQTIILRENRISNVHY-TLSFYIELRSLDLSVN 84
F L + + + +E V Q P + +IL N I+N+ + L++L+LS N
Sbjct: 59 FPTALNLTISHSNIEYVQSQSFDHLPNLTALILDANHITNIDKDAFNNLHHLQTLNLSCN 118
Query: 85 KINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLS----YNKISVINKT 140
I+ L F + L L + N+++ K F L LK LDL YN SV+
Sbjct: 119 NISFLHRDVFSDLHNLTQLLLGSNKLTNPDKYLFSSLTNLKILDLRRNHLYNFSSVVE-- 176
Query: 141 AFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQI 183
+ + L L LSFN +T + S +SL +L L +N++
Sbjct: 177 SITNLTSLIKLDLSFNKLTTLQHSTHLP--ESLALLYLGDNKL 217
Score = 92 (37.4 bits), Expect = 3.2e-13, Sum P(2) = 3.2e-13
Identities = 29/119 (24%), Positives = 50/119 (42%)
Query: 337 GTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKI-NLIPNLDSIDQRAFVDNIQLETVII 395
G L L+ N+ F L +L + + N + + F +L T+ +
Sbjct: 580 GLTSLKSLYLTNNHIIGFGDETFDDLKNLDYLTLDNSCAGVAQLQSGIFKSLQKLRTLSL 639
Query: 396 NENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPLHCDCN 453
ENM +K +F T LK++ L N + L+ S L + ++D+ PL C C+
Sbjct: 640 -ENMGIKSFSKDVFGNLTGLKTLHLNRNPMMSLDISLLDNLTNLIYIDMRSCPLSCGCH 697
>UNIPROTKB|F1SF23 [details] [associations]
symbol:LOC100520342 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0030512 "negative regulation of transforming
growth factor beta receptor signaling pathway" evidence=IEA]
[GO:0030198 "extracellular matrix organization" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] [GO:0005614
"interstitial matrix" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005615
InterPro:IPR000483 SMART:SM00082 GO:GO:0030198 GO:GO:0000122
InterPro:IPR000372 SMART:SM00013 GO:GO:0030512 GO:GO:0005614
GeneTree:ENSGT00700000104286 EMBL:CU694620 RefSeq:XP_003121288.1
UniGene:Ssc.79026 Ensembl:ENSSSCT00000004699 GeneID:100520342
KEGG:ssc:100520342 OMA:LPHLKHM Uniprot:F1SF23
Length = 512
Score = 204 (76.9 bits), Expect = 3.3e-13, P = 3.3e-13
Identities = 108/402 (26%), Positives = 173/402 (43%)
Query: 77 RSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISV 136
+ L +S +KI L NF L + + + ++ DTFK L LKTL+L NK+
Sbjct: 50 KKLYISHSKIQHLQLSNFIQMLALEDFILLASGTESVKNDTFKTLSTLKTLELWKNKLRR 109
Query: 137 INKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPH 196
I LE+L L+ N+I+ S+ F LK L IL+L NN I + + LS+L
Sbjct: 110 IPSAL---PASLEVLKLNDNSISVLHRSD-FEGLKKLTILELKNNLISSLSPSTLSSLV- 164
Query: 197 QSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXX 256
SL L L+ N IETV P L++L +++ +L++L
Sbjct: 165 -SLQSLVLDGNSIETV---EGPLALSHLTHMSMENNKLHLLPAGFFTSLQSLQFLSLSSN 220
Query: 257 XXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLK-LVKINLIPN-LDSIDQXX 314
IP L K +L++L + N + V+F+ L L+ L + L N L S D
Sbjct: 221 FLTQIPIN-LPK--SLLSLKMERNR---LKVVSFEDLKHLENLSHLYLSENSLSSFD--G 272
Query: 315 XXXXXXXXXXXXXXXAFSLTPLGT-LKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLI 373
+ PL + +LD+S N + + F+ L LK + L
Sbjct: 273 AQLLANLTTLELSQNQLQMLPLRLPARLQKLDISNNLIQKVTAQDFQDLRDLK--HLFLD 330
Query: 374 PNLDSIDQRAFVDNI-QLETVIINENMNLK---QLPSKL----FQGNT----------NL 415
N+ S+ + + QL + + +N+ L +LP L +GN +L
Sbjct: 331 NNIVSLFEAGALQRCSQLSNLALEQNLLLSIPLRLPGTLARLDLKGNAIQDIAERELKDL 390
Query: 416 KSV---SLKGNSLSHLEASHFP-LERISFLDLSDNPLHCDCN 453
K + +L+ N +S L+ L R+ +L L NP +C C+
Sbjct: 391 KQLQVLNLRNNKISALDLKALEVLPRLRYLYLDGNPWNCTCS 432
Score = 153 (58.9 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 81/310 (26%), Positives = 134/310 (43%)
Query: 3 YFLTCIFLILALTKLNKAICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENR 62
Y L ++L+L+ CP RC C D + C LEV P + + + + ++
Sbjct: 2 YLLYTFLVLLSLSYGFDPNCPGRCSC-DSEQSVQCYRL-LEV-PSGIPSTTKKLYISHSK 58
Query: 63 ISNVHYTLSFYIELRSLD---LSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFK 119
I H LS +I++ +L+ L + + + F+ + L L + N++ +
Sbjct: 59 IQ--HLQLSNFIQMLALEDFILLASGTESVKNDTFKTLSTLKTLELWKNKLRRIPSALPA 116
Query: 120 GLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLD 179
L+ LK D N ISV++++ F L +L L N I+ S + SSL SL+ L LD
Sbjct: 117 SLEVLKLND---NSISVLHRSDFEGLKKLTILELKNNLISSLSPSTL-SSLVSLQSLVLD 172
Query: 180 NNQILDVPNNV-LSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXX 238
N I V + LS+L H S+ N L +L F +L +L L+L
Sbjct: 173 GNSIETVEGPLALSHLTHMSME----NNKL--HLLPAGFFTSLQSLQFLSLSSNFLTQIP 226
Query: 239 XXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAF-KSLFSLK 297
+L +L K L LS +L LS N+ S+ D +L +L+
Sbjct: 227 INLPKSLLSLKMERNRLKVVSFEDLKHLENLS---HLYLSENSLSSFDGAQLLANLTTLE 283
Query: 298 LVK--INLIP 305
L + + ++P
Sbjct: 284 LSQNQLQMLP 293
Score = 145 (56.1 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 89/349 (25%), Positives = 146/349 (41%)
Query: 56 IILRENRISNVHYTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSK 115
I+L S + T L++L+L NK+ + S ++L LN N IS L +
Sbjct: 77 ILLASGTESVKNDTFKTLSTLKTLELWKNKLRRIPSA-LPASLEVLKLND--NSISVLHR 133
Query: 116 DTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRI 175
F+GLK+L L+L N IS ++ + + L+ L+L N+I E +L L
Sbjct: 134 SDFEGLKKLTILELKNNLISSLSPSTLSSLVSLQSLVLDGNSIETVEGP---LALSHLTH 190
Query: 176 LKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXX 235
+ ++NN++ +P ++L QSL +L L+ N + T + + P +L +L
Sbjct: 191 MSMENNKLHLLPAGFFTSL--QSLQFLSLSSNFL-TQIPINLPKSLLSLKMERNRLKVVS 247
Query: 236 XXXXXXXVTLRTLHXXXXXXXXXXA------IPTKQLS---------KLSA-LVNLDLSG 279
L L+ + T +LS +L A L LD+S
Sbjct: 248 FEDLKHLENLSHLYLSENSLSSFDGAQLLANLTTLELSQNQLQMLPLRLPARLQKLDISN 307
Query: 280 NNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQXXXXXXXXXXXXXXXXXAFSLT-PL-- 336
N + + F+ L LK + L N+ S+ + L+ PL
Sbjct: 308 NLIQKVTAQDFQDLRDLK--HLFLDNNIVSLFEAGALQRCSQLSNLALEQNLLLSIPLRL 365
Query: 337 -GTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRA 383
GTL RLDL GN +I K L L++ +NL N + ++D +A
Sbjct: 366 PGTLA--RLDLKGNAIQDIAERELKDLKQLQV--LNLRNNKISALDLKA 410
>UNIPROTKB|A6QPQ1 [details] [associations]
symbol:NEPN "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0030512 "negative regulation of transforming growth
factor beta receptor signaling pathway" evidence=IEA] [GO:0030198
"extracellular matrix organization" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005614 "interstitial
matrix" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005615
GO:GO:0030198 GO:GO:0000122 InterPro:IPR000372 SMART:SM00013
GO:GO:0030512 GO:GO:0005614 GeneTree:ENSGT00700000104286
EMBL:DAAA02025759 EMBL:DAAA02025760 EMBL:DAAA02025761 EMBL:BC149425
IPI:IPI00867027 IPI:IPI01028059 RefSeq:NP_001096797.1
UniGene:Bt.98028 STRING:A6QPQ1 Ensembl:ENSBTAT00000055571
GeneID:100125284 KEGG:bta:100125284 CTD:66650 eggNOG:NOG261221
HOGENOM:HOG000152307 HOVERGEN:HBG075864 InParanoid:A6QPQ1
OMA:RRLYISH OrthoDB:EOG49KFQM NextBio:20788795 Uniprot:A6QPQ1
Length = 512
Score = 204 (76.9 bits), Expect = 3.3e-13, P = 3.3e-13
Identities = 107/402 (26%), Positives = 172/402 (42%)
Query: 77 RSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISV 136
+ L +S +KI L NF L + + + ++ DTFK L LKTL+L NK+
Sbjct: 50 KKLYISHSKIQHLQLSNFTQMLALEDFLLLASGTESVENDTFKTLSTLKTLELWKNKLRR 109
Query: 137 INKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPH 196
+ + LE+L L+ N+I S+ F LK L+IL+L NN I + ++LS+L
Sbjct: 110 VPRAL---PASLEVLKLNDNSIYVLHGSD-FEGLKKLKILELKNNLISSISTSMLSSLV- 164
Query: 197 QSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXX 256
SL L L+ N IE V P L +L L++ +L++L
Sbjct: 165 -SLQSLMLDANNIENV---EGPLALPHLKHLSMENNKLHLIPASFFTSLQSLQFLSFSSN 220
Query: 257 XXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLK-LVKINLIPN-LDSIDQXX 314
IP L K +L++L + N + +V F+ + L+ L + L N L SI+
Sbjct: 221 FLTKIPIN-LPK--SLLSLKMERNR---LKAVRFRDMKHLENLSHLYLSENSLSSIE--G 272
Query: 315 XXXXXXXXXXXXXXXAFSLTPLGT-LKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLI 373
PL + +LD+S N + + F+ L LK + L
Sbjct: 273 AQLLANLTTLEVSQNQLQTLPLRLPARLQKLDISNNLIRKVTAQDFRDLRDLK--HLFLD 330
Query: 374 PNLDSIDQRAFVDNI-QLETVIINENMNLK---QLPSKL----FQGNT----------NL 415
N+ S+ + + QL + + +N+ L +LP L +GN +L
Sbjct: 331 NNIVSLFEAGALQKCSQLSNLALEQNLLLSIPLRLPGTLARLDLKGNAIQDIAEREVKDL 390
Query: 416 KSV---SLKGNSLSHLEASHFP-LERISFLDLSDNPLHCDCN 453
K + +L+ N LS L+ L R+ L L NP +C C+
Sbjct: 391 KQLQVLNLRNNRLSALDLKALEVLPRLRHLYLDGNPWNCTCS 432
Score = 148 (57.2 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 86/329 (26%), Positives = 138/329 (41%)
Query: 76 LRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKIS 135
L++L+L NK+ + ++L LN N I L F+GLK+LK L+L N IS
Sbjct: 97 LKTLELWKNKLRRV-PRALPASLEVLKLND--NSIYVLHGSDFEGLKKLKILELKNNLIS 153
Query: 136 VINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLP 195
I+ + + L+ L+L NNI E+ E +L L+ L ++NN++ +P + ++L
Sbjct: 154 SISTSMLSSLVSLQSLMLDANNI---ENVEGPLALPHLKHLSMENNKLHLIPASFFTSL- 209
Query: 196 HQSLHYLYLNENLIETVLDNSFPFTLTNL----------------HTLALXXXXXXXXXX 239
QSL +L + N + T + + P +L +L H L
Sbjct: 210 -QSLQFLSFSSNFL-TKIPINLPKSLLSLKMERNRLKAVRFRDMKHLENLSHLYLSENSL 267
Query: 240 XXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLV 299
+ L + T L + L LD+S N + + F+ L LK
Sbjct: 268 SSIEGAQLLANLTTLEVSQNQLQTLPLRLPARLQKLDISNNLIRKVTAQDFRDLRDLK-- 325
Query: 300 KINLIPNLDSIDQXXXXXXXXXXXXXXXXXAFSLT-PL---GTLKCDRLDLSGNNFSNID 355
+ L N+ S+ + L+ PL GTL RLDL GN +I
Sbjct: 326 HLFLDNNIVSLFEAGALQKCSQLSNLALEQNLLLSIPLRLPGTLA--RLDLKGNAIQDIA 383
Query: 356 SVAFKSLFSLKLVKINLIPN-LDSIDQRA 383
K L L++ +NL N L ++D +A
Sbjct: 384 EREVKDLKQLQV--LNLRNNRLSALDLKA 410
Score = 139 (54.0 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 70/285 (24%), Positives = 124/285 (43%)
Query: 8 IFLILALTKLNKAI---CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRIS 64
++ LAL L + CP RC C D + C L VP + + + + ++I
Sbjct: 4 LYAFLALLSLCYGLDPHCPGRCSC-DSEQSVQCYR--LTEVPSGIPSTTKKLYISHSKIQ 60
Query: 65 NVHYTLSFYIELRSLD---LSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGL 121
H LS + ++ +L+ L + + + F+ + L L + N++ + + L
Sbjct: 61 --HLQLSNFTQMLALEDFLLLASGTESVENDTFKTLSTLKTLELWKNKLRRVPRALPASL 118
Query: 122 KELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNN 181
+ LK D N I V++ + F L++L L NN+ + + SSL SL+ L LD N
Sbjct: 119 EVLKLND---NSIYVLHGSDFEGLKKLKILELK-NNLISSISTSMLSSLVSLQSLMLDAN 174
Query: 182 QILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXX 241
I +V + LPH L +L + N + ++ SF +L +L L+
Sbjct: 175 NIENVEGPLA--LPH--LKHLSMENNKLH-LIPASFFTSLQSLQFLSFSSNFLTKIPINL 229
Query: 242 XVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNID 286
+L +L A+ + + L L +L LS N+ S+I+
Sbjct: 230 PKSLLSLKMERNRLK---AVRFRDMKHLENLSHLYLSENSLSSIE 271
>FB|FBgn0003255 [details] [associations]
symbol:rk "rickets" species:7227 "Drosophila melanogaster"
[GO:0004930 "G-protein coupled receptor activity" evidence=ISS;NAS]
[GO:0016021 "integral to membrane" evidence=IEA;ISS] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IEA;ISS]
[GO:0016500 "protein-hormone receptor activity" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=NAS] [GO:0008188
"neuropeptide receptor activity" evidence=ISS] [GO:0007564
"regulation of chitin-based cuticle tanning" evidence=IMP]
[GO:0001837 "epithelial to mesenchymal transition" evidence=IMP]
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 EMBL:AE014134
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0001837
InterPro:IPR025875 Pfam:PF12799 GO:GO:0016500 GO:GO:0008188
GeneTree:ENSGT00650000092962 KO:K08399 RefSeq:NP_476702.1
UniGene:Dm.6481 ProteinModelPortal:Q7KTA0 SMR:Q7KTA0 STRING:Q7KTA0
PRIDE:Q7KTA0 EnsemblMetazoa:FBtr0080610 GeneID:34819
KEGG:dme:Dmel_CG8930 UCSC:CG8930-RA CTD:34819 FlyBase:FBgn0003255
InParanoid:Q7KTA0 OMA:WLITRKT OrthoDB:EOG4FN2ZQ PhylomeDB:Q7KTA0
GenomeRNAi:34819 NextBio:790377 ArrayExpress:Q7KTA0 Bgee:Q7KTA0
GO:GO:0007564 Uniprot:Q7KTA0
Length = 1360
Score = 210 (79.0 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 98/395 (24%), Positives = 160/395 (40%)
Query: 75 ELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKI 134
E+ LDL N + L +++F L L +S N I + + F GL +LK L L +
Sbjct: 180 EVVVLDLGNNNLTKLEANSFFMAPNLEELTLSDNSIINMDPNAFYGLAKLKRLSLQNCGL 239
Query: 135 SVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNL 194
+ +F+ L L L+ N + D + L+ LR L+L+ N +P N L+ L
Sbjct: 240 KSLPPQSFQGLAQLTSLQLNGNALVSL-DGDCLGHLQKLRTLRLEGNLFYRIPTNALAGL 298
Query: 195 PHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXX 254
++L L L NL+ + D FP + NL L L L L
Sbjct: 299 --RTLEALNLGSNLLTIINDEDFP-RMPNLIVLLLKRNQIMKISAGALKNLTALKVLELD 355
Query: 255 XXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLD-SIDQX 313
++P + LSKLS L L ++ N I+ + ++ N + + +
Sbjct: 356 DNLISSLP-EGLSKLSQLQELSITSNRLRWINDTELPRSMQMLDMRANPLSTISPGAFRG 414
Query: 314 XXXXXXXXXXXXXXXXAF-SLTPLGTLKCDRLDLSGNNF--SNI--DSVAFKSLFSLKLV 368
+F L L+ +LD +G +N+ + KSL LK
Sbjct: 415 MSKLRKLILSDVRTLRSFPELEACHALEILKLDRAGIQEVPANLCRQTPRLKSL-ELKTN 473
Query: 369 KINLIPNLDSI-DQRAF------VDNIQ---------LETVIINENMNLKQLPSKLFQGN 412
+ IPNL S D R ++ IQ L ++++ N +K LP FQG
Sbjct: 474 SLKRIPNLSSCRDLRLLDLSSNQIEKIQGKPFNGLKQLNDLLLSYN-RIKALPQDAFQGI 532
Query: 413 TNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDN 446
L+ + L+GN +S++ F + L+L +N
Sbjct: 533 PKLQLLDLEGNEISYIHKEAFSGFTALEDLNLGNN 567
Score = 185 (70.2 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 62/169 (36%), Positives = 89/169 (52%)
Query: 40 AGLEVVPIQL---NPEVQTIILRENRISNVHYTLSFYIELRSLDLSVNKINVLGSHNFEY 96
AG++ VP L P ++++ L+ N + + LS +LR LDLS N+I + F
Sbjct: 449 AGIQEVPANLCRQTPRLKSLELKTNSLKRIP-NLSSCRDLRLLDLSSNQIEKIQGKPFNG 507
Query: 97 QNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFN 156
+L +L +SYN I AL +D F+G+ +L+ LDL N+IS I+K AF LE L L N
Sbjct: 508 LKQLNDLLLSYNRIKALPQDAFQGIPKLQLLDLEGNEISYIHKEAFSGFTALEDLNLG-N 566
Query: 157 NITYFEDSEIFSSLKSLRILKLDNNQILDV--PNNVLSNLPHQSLHYLY 203
NI + E E S L++L LK NN L P + + L Y Y
Sbjct: 567 NI-FPELPE--SGLRALLHLKTFNNPKLREFPPPDTFPRIQTLILSYAY 612
Score = 152 (58.6 bits), Expect = 6.7e-07, P = 6.7e-07
Identities = 82/348 (23%), Positives = 138/348 (39%)
Query: 75 ELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKI 134
+L SL L+ N + L + KL L + N + + GL+ L+ L+L N +
Sbjct: 252 QLTSLQLNGNALVSLDGDCLGHLQKLRTLRLEGNLFYRIPTNALAGLRTLEALNLGSNLL 311
Query: 135 SVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNL 194
++IN F +L +L+L N I + +L +L++L+LD+N I +P LS L
Sbjct: 312 TIINDEDFPRMPNLIVLLLKRNQIMKISAGAL-KNLTALKVLELDDNLISSLPEG-LSKL 369
Query: 195 PHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXX 254
L L + N + + D P ++ L A LR L
Sbjct: 370 --SQLQELSITSNRLRWINDTELPRSMQMLDMRANPLSTISPGAFRGMSKLRKL--ILSD 425
Query: 255 XXXXXAIPTKQLSKLSALVNLDLSGNNF--SNI--DSVAFKSLFSLKLVKINLIPNLDSI 310
+ P + ++ LD +G +N+ + KSL LK + IPNL S
Sbjct: 426 VRTLRSFPELEACHALEILKLDRAGIQEVPANLCRQTPRLKSL-ELKTNSLKRIPNLSSC 484
Query: 311 DQXXXXXXXXXXXXXXXXXAFSLTPLGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKI 370
F+ G + + L LS N + AF+ + L+L +
Sbjct: 485 RDLRLLDLSSNQIEKIQGKPFN----GLKQLNDLLLSYNRIKALPQDAFQGIPKLQL--L 538
Query: 371 NLIPN-LDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKS 417
+L N + I + AF LE + + N+ +LP + +LK+
Sbjct: 539 DLEGNEISYIHKEAFSGFTALEDLNLGNNI-FPELPESGLRALLHLKT 585
>MGI|MGI:106036 [details] [associations]
symbol:Lrrn3 "leucine rich repeat protein 3, neuronal"
species:10090 "Mus musculus" [GO:0001934 "positive regulation of
protein phosphorylation" evidence=ISO] [GO:0005886 "plasma
membrane" evidence=ISO] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030131
"clathrin adaptor complex" evidence=ISO] [GO:0032403 "protein
complex binding" evidence=ISO] InterPro:IPR001611
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060 MGI:MGI:106036
GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0001934 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0030131 MEROPS:I43.001
GeneTree:ENSGT00690000102097 HOGENOM:HOG000252914
HOVERGEN:HBG052361 CTD:54674 OMA:RWINMNK OrthoDB:EOG4MGS6W
EMBL:D49802 EMBL:AK036316 EMBL:BC069041 IPI:IPI00314773
RefSeq:NP_001258637.1 RefSeq:NP_001258638.1 RefSeq:NP_034863.1
UniGene:Mm.39913 ProteinModelPortal:Q8CBC6 SMR:Q8CBC6 STRING:Q8CBC6
PRIDE:Q8CBC6 Ensembl:ENSMUST00000043884 GeneID:16981 KEGG:mmu:16981
UCSC:uc007nln.1 InParanoid:Q8CBC6 NextBio:291064 Bgee:Q8CBC6
CleanEx:MM_LRRN3 Genevestigator:Q8CBC6
GermOnline:ENSMUSG00000036295 Uniprot:Q8CBC6
Length = 707
Score = 206 (77.6 bits), Expect = 3.7e-13, P = 3.7e-13
Identities = 83/321 (25%), Positives = 147/321 (45%)
Query: 8 IFLILALTKLNKAI-----CPSRCQC-----FDQK---LEAS---CTDAGLEVVPIQLNP 51
+ L LA+T L +AI CP C C F + +EAS C D GL P +L
Sbjct: 10 VLLGLAITTLVQAIDKKVDCPQLCTCEIRPWFTPRSIYMEASTVDCNDLGLLNFPARLPA 69
Query: 52 EVQTIILRENRISNVHYTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEIS 111
+ Q ++L+ N I+ + ++ F + L LDLS N ++ + + N + ++LL++ + N+++
Sbjct: 70 DTQILLLQTNNIARIEHSTDFPVNLTGLDLSQNNLSSVTNINVQKMSQLLSVYLEENKLT 129
Query: 112 ALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLK 171
L + GL L+ L +++N +S I+ AF +L L L+ N + +S+ F +L
Sbjct: 130 ELPEKCLYGLSNLQELYVNHNLLSTISPGAFIGLHNLLRLHLNSNRLQMI-NSQWFDALP 188
Query: 172 SLRILKLDNNQILDVPNNVLSNLPHQSLHYLYL-NENLIETVLDNSFPFTLTNLHTLALX 230
+L IL L +N I+ + + ++ P L L + NL E + D++ L NL +++
Sbjct: 189 NLEILMLGDNPIIRIKD--MNFQPLVKLRSLVIAGINLTE-IPDDALA-GLENLESISFY 244
Query: 231 XXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGN-NFSNIDSVA 289
L I S + L L ++ +IDS+A
Sbjct: 245 DNRLSKVPQVALQKAVNLKFLDLNKNPINRIRRGDFSNMLHLKELGINNMPELVSIDSLA 304
Query: 290 FKSLFSLKLVKINLIPNLDSI 310
+L L+ ++ P L I
Sbjct: 305 VDNLPDLRKIEATNNPRLSYI 325
Score = 177 (67.4 bits), Expect = 5.5e-10, P = 5.5e-10
Identities = 88/336 (26%), Positives = 129/336 (38%)
Query: 123 ELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQ 182
E T+D N + ++N A R ++L+L NNI E S F +L L L N
Sbjct: 49 EASTVDC--NDLGLLNFPA-RLPADTQILLLQTNNIARIEHSTDFPV--NLTGLDLSQNN 103
Query: 183 ILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXX 242
+ V N + + L +YL EN + T L + L+NL L +
Sbjct: 104 LSSVTNINVQKM--SQLLSVYLEENKL-TELPEKCLYGLSNLQELYVNHNLLSTISPGAF 160
Query: 243 VTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
+ L L I ++ L L L L N I + F+ L L+ + I
Sbjct: 161 IGLHNLLRLHLNSNRLQMINSQWFDALPNLEILMLGDNPIIRIKDMNFQPLVKLRSLVIA 220
Query: 303 LIPNLDSIDQXXXXXXXXXXXXXXXXXAFSLTPLGTLK----CDRLDLSGNNFSNIDSVA 358
I NL I S P L+ LDL+ N + I
Sbjct: 221 GI-NLTEIPDDALAGLENLESISFYDNRLSKVPQVALQKAVNLKFLDLNKNPINRIRRGD 279
Query: 359 FKSLFSLKLVKINLIPNLDSIDQRAFVDNI-QLETVIINENMNLKQLPSKLFQGNTNLKS 417
F ++ LK + IN +P L SID A VDN+ L + N L + F L+S
Sbjct: 280 FSNMLHLKELGINNMPELVSIDSLA-VDNLPDLRKIEATNNPRLSYIHPNAFFRLPKLES 338
Query: 418 VSLKGNSLSHL-EASHFPLERISFLDLSDNPLHCDC 452
+ L N+LS L + L + + + NP+ CDC
Sbjct: 339 LMLNTNALSALYHGTIESLPNLKEISIHSNPIRCDC 374
>UNIPROTKB|F1NR94 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0001656
"metanephros development" evidence=IEA] [GO:0001657 "ureteric bud
development" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001933 "negative regulation of
protein phosphorylation" evidence=IEA] [GO:0002042 "cell migration
involved in sprouting angiogenesis" evidence=IEA] [GO:0005095
"GTPase inhibitor activity" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0008201 "heparin binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0010593
"negative regulation of lamellipodium assembly" evidence=IEA]
[GO:0010596 "negative regulation of endothelial cell migration"
evidence=IEA] [GO:0010629 "negative regulation of gene expression"
evidence=IEA] [GO:0016337 "cell-cell adhesion" evidence=IEA]
[GO:0021836 "chemorepulsion involved in postnatal olfactory bulb
interneuron migration" evidence=IEA] [GO:0021972 "corticospinal
neuron axon guidance through spinal cord" evidence=IEA] [GO:0030308
"negative regulation of cell growth" evidence=IEA] [GO:0030837
"negative regulation of actin filament polymerization"
evidence=IEA] [GO:0031290 "retinal ganglion cell axon guidance"
evidence=IEA] [GO:0032870 "cellular response to hormone stimulus"
evidence=IEA] [GO:0033563 "dorsal/ventral axon guidance"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043116 "negative regulation of vascular
permeability" evidence=IEA] [GO:0043237 "laminin-1 binding"
evidence=IEA] [GO:0043394 "proteoglycan binding" evidence=IEA]
[GO:0045499 "chemorepellent activity" evidence=IEA] [GO:0048495
"Roundabout binding" evidence=IEA] [GO:0048754 "branching
morphogenesis of an epithelial tube" evidence=IEA] [GO:0048846
"axon extension involved in axon guidance" evidence=IEA]
[GO:0050929 "induction of negative chemotaxis" evidence=IEA]
[GO:0051058 "negative regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0051414 "response to cortisol
stimulus" evidence=IEA] [GO:0060763 "mammary duct terminal end bud
growth" evidence=IEA] [GO:0061364 "apoptotic process involved in
luteolysis" evidence=IEA] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IEA] [GO:0071504
"cellular response to heparin" evidence=IEA] [GO:0071672 "negative
regulation of smooth muscle cell chemotaxis" evidence=IEA]
[GO:0071676 "negative regulation of mononuclear cell migration"
evidence=IEA] [GO:0090024 "negative regulation of neutrophil
chemotaxis" evidence=IEA] [GO:0090260 "negative regulation of
retinal ganglion cell axon guidance" evidence=IEA] [GO:0090288
"negative regulation of cellular response to growth factor
stimulus" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005737
GO:GO:0008285 GO:GO:0005615 GO:GO:0009986 GO:GO:0030308
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0008201 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0043065 GO:GO:0071504 GO:GO:0005095
GO:GO:0016337 PROSITE:PS01186 GO:GO:0032870 GO:GO:0030837
GO:GO:0010629 InterPro:IPR001791 Pfam:PF00054 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 GO:GO:0071672 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0010596 GO:GO:0001933
GO:GO:0071676 GO:GO:0070100 GO:GO:0090288 GO:GO:0045499
Pfam:PF01463 GO:GO:0010593 GO:GO:0051414
GeneTree:ENSGT00700000104083 GO:GO:0050929 GO:GO:0090024
GO:GO:0051058 EMBL:AADN02015249 EMBL:AADN02015250 EMBL:AADN02015251
EMBL:AADN02015252 EMBL:AADN02015253 EMBL:AADN02015254
EMBL:AADN02015255 EMBL:AADN02015256 EMBL:AADN02015257
EMBL:AADN02015258 EMBL:AADN02015259 EMBL:AADN02015260
EMBL:AADN02015261 EMBL:AADN02015262 EMBL:AADN02015263
EMBL:AADN02015264 EMBL:AADN02015265 EMBL:AADN02015266
EMBL:AADN02015267 EMBL:AADN02015268 EMBL:AADN02015269
EMBL:AADN02015270 EMBL:AADN02015271 IPI:IPI00594561
Ensembl:ENSGALT00000037314 ArrayExpress:F1NR94 Uniprot:F1NR94
Length = 666
Score = 205 (77.2 bits), Expect = 4.1e-13, Sum P(2) = 4.1e-13
Identities = 48/135 (35%), Positives = 72/135 (53%)
Query: 22 CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSFYIELRSLDL 81
CP+ C C D + C++ GL+ +P + +V + L N+ + V LS Y L +DL
Sbjct: 68 CPAECTCLDTVVR--CSNKGLKALPKGIPKDVTELYLDGNQFTLVPKELSNYKHLTLIDL 125
Query: 82 SVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTA 141
S N+I+ L + +F +LL L +SYN + + TF GLK L+ L L N ISV+ + A
Sbjct: 126 SNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPARTFDGLKSLRLLSLHGNDISVVPEGA 185
Query: 142 FRDTLHLELLILSFN 156
F D L L + N
Sbjct: 186 FNDLSALSHLAIGAN 200
Score = 141 (54.7 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 42/123 (34%), Positives = 67/123 (54%)
Query: 335 PLGTLK-CDRLDLSGNNFSNIDSVAFKSLFSLK-LVKINLIPN-LDSIDQRAFVDNIQLE 391
P G K L L GN F+ + K L + K L I+L N + ++ ++F + QL
Sbjct: 90 PKGIPKDVTELYLDGNQFTLVP----KELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLL 145
Query: 392 TVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHF-PLERISFLDLSDNPLHC 450
T+I++ N L+ +P++ F G +L+ +SL GN +S + F L +S L + NPL+C
Sbjct: 146 TLILSYN-RLRCIPARTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 204
Query: 451 DCN 453
DCN
Sbjct: 205 DCN 207
Score = 127 (49.8 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 34/105 (32%), Positives = 54/105 (51%)
Query: 103 LNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFE 162
L + N+ + + K+ K L +DLS N+IS ++ +F + L LILS+N +
Sbjct: 100 LYLDGNQFTLVPKE-LSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIP 158
Query: 163 DSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNEN 207
+ F LKSLR+L L N I VP ++L +L +L + N
Sbjct: 159 -ARTFDGLKSLRLLSLHGNDISVVPEGAFNDL--SALSHLAIGAN 200
Score = 46 (21.3 bits), Expect = 4.1e-13, Sum P(2) = 4.1e-13
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 496 DRIIKNNHSLTIVLNNLKCSSPPDIKG 522
D +NN + +NN C PP+ G
Sbjct: 345 DNDCENNSTCVDGINNYTCLCPPEYTG 371
Score = 37 (18.1 bits), Expect = 3.5e-12, Sum P(2) = 3.5e-12
Identities = 9/28 (32%), Positives = 10/28 (35%)
Query: 496 DRIIKNNHSLTIVLNNLKCSSPPDIKGL 523
D KN T +N C P GL
Sbjct: 423 DNKCKNGAQCTDAVNGYTCICPEGYSGL 450
>FB|FBgn0004364 [details] [associations]
symbol:18w "18 wheeler" species:7227 "Drosophila
melanogaster" [GO:0005886 "plasma membrane" evidence=ISS;IDA]
[GO:0004888 "transmembrane signaling receptor activity"
evidence=ISS] [GO:0007155 "cell adhesion" evidence=IDA] [GO:0009653
"anatomical structure morphogenesis" evidence=IMP] [GO:0006955
"immune response" evidence=IEP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0019731 "antibacterial humoral response"
evidence=NAS;IMP;TAS] [GO:0048598 "embryonic morphogenesis"
evidence=TAS] [GO:0006952 "defense response" evidence=TAS]
[GO:0007165 "signal transduction" evidence=IEA;ISS] [GO:0016021
"integral to membrane" evidence=ISS] [GO:0007275 "multicellular
organismal development" evidence=TAS] [GO:0019730 "antimicrobial
humoral response" evidence=IMP] InterPro:IPR000157
InterPro:IPR001611 Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450
SMART:SM00255 GO:GO:0016021 GO:GO:0005886 GO:GO:0005737
GO:GO:0048598 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007155 GO:GO:0019731 InterPro:IPR000372
SMART:SM00013 GO:GO:0004888 InterPro:IPR026906 Pfam:PF13306
SUPFAM:SSF52200 FlyBase:FBgn0004364 EMBL:L23171 PIR:T13852
PIR:T13887 HSSP:O60603 ProteinModelPortal:Q24591 STRING:Q24591
PRIDE:Q24591 InParanoid:Q24591 ArrayExpress:Q24591 Bgee:Q24591
Uniprot:Q24591
Length = 1389
Score = 215 (80.7 bits), Expect = 4.1e-13, Sum P(2) = 4.1e-13
Identities = 106/408 (25%), Positives = 171/408 (41%)
Query: 51 PEVQTIILRENRISNVHYTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEI 110
P +Q + L +NRI + + L F +L + +++ N S E Q L++S+NE+
Sbjct: 169 PSLQLLNLTQNRIRSAEF-LGFSEKLCA-GSALSNANGAVSGGSELQT----LDVSFNEL 222
Query: 111 SALSKDTFKG--LKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFS 168
+L D + L+ L+TL L +N IS + A L +L +S+N++ SE F+
Sbjct: 223 RSLP-DAWGASRLRRLQTLSLQHNNISTLAPNALAGLSSLRVLNISYNHLVSLP-SEAFA 280
Query: 169 SLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNEN-LIETVLDNSFPFTLTNLHTL 227
K LR L L N + ++P +L L + L L L+ N L +DNS L L L
Sbjct: 281 GNKELRELHLQGNDLYELPKGLLHRL--EQLLVLDLSGNQLTSHHVDNSTFAGLIRLIVL 338
Query: 228 ALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDS 287
L L L I L L L+L+ N +D+
Sbjct: 339 NLSNNALTRIGSKTFKELYFLQILDMRNNSIGHIEEGAFLPLYNLHTLNLAENRLHTLDN 398
Query: 288 VAFKSLFSLKLVKINLIPNLDSI-DQXXXXXXXXXXXXXXXXXAFSLTP-----LGTLKC 341
F L+ L K+ L NL SI + + P L LK
Sbjct: 399 RIFNGLYVL--TKLTLNNNLVSIVESQAFRNCSDLKELDLSSNQLTEVPEAVQDLSMLKT 456
Query: 342 DRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINENMN 400
LDL N S + F++L +L + LI N + +I F D +L + + +N
Sbjct: 457 --LDLGENQISEFKNNTFRNLN--QLTGLRLIDNRIGNITVGMFQDLPRLSVLNLAKN-R 511
Query: 401 LKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFPLERISFLDLSDNPL 448
++ + F NT ++++ L N L+ + L + +L+LS+N L
Sbjct: 512 IQSIERGAFDKNTEIEAIRLDKNFLTDINGIFATLASLLWLNLSENHL 559
Score = 192 (72.6 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 98/410 (23%), Positives = 168/410 (40%)
Query: 52 EVQTIILRENRISNVH--YTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNE 109
E+QT+ + N + ++ + S L++L L N I+ L + + L LNISYN
Sbjct: 211 ELQTLDVSFNELRSLPDAWGASRLRRLQTLSLQHNNISTLAPNALAGLSSLRVLNISYNH 270
Query: 110 ISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNIT-YFEDSEIFS 168
+ +L + F G KEL+ L L N + + K L +L LS N +T + D+ F+
Sbjct: 271 LVSLPSEAFAGNKELRELHLQGNDLYELPKGLLHRLEQLLVLDLSGNQLTSHHVDNSTFA 330
Query: 169 SLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLA 228
L L +L L NN + + + L L L + N I + + +F L NLHTL
Sbjct: 331 GLIRLIVLNLSNNALTRIGSKTFKEL--YFLQILDMRNNSIGHIEEGAF-LPLYNLHTLN 387
Query: 229 LXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSV 288
L L L + ++ S L LDLS N + +
Sbjct: 388 LAENRLHTLDNRIFNGLYVLTKLTLNNNLVSIVESQAFRNCSDLKELDLSSNQLTEVPE- 446
Query: 289 AFKSLFSLKLVKI--NLIPNLDS-----IDQXXXXXXXXXXXXXXXXXAFSLTPLGTLKC 341
A + L LK + + N I + ++Q F P +
Sbjct: 447 AVQDLSMLKTLDLGENQISEFKNNTFRNLNQLTGLRLIDNRIGNITVGMFQDLP----RL 502
Query: 342 DRLDLSGNNFSNIDSVAFKSLFSLKLVKI--NLIPNLDSIDQRAFVDNIQLETVIINENM 399
L+L+ N +I+ AF ++ +++ N + +++ I F L + ++EN
Sbjct: 503 SVLNLAKNRIQSIERGAFDKNTEIEAIRLDKNFLTDINGI----FATLASLLWLNLSEN- 557
Query: 400 NLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFPLE---RISFLDLSDN 446
+L +NLK + + GN + L +++ L+ R++ LD S N
Sbjct: 558 HLVWFDYAFIP--SNLKWLDIHGNYIEAL-GNYYKLQEEIRVTTLDASHN 604
Score = 188 (71.2 bits), Expect = 3.6e-10, Sum P(2) = 3.6e-10
Identities = 99/417 (23%), Positives = 171/417 (41%)
Query: 50 NPEVQTIILRENRISNVHYTLSFYIE-LRSLDLSVNKINVLGSHNFEYQN--KLLNLNIS 106
N E++ + L+ N + + L +E L LDLS N++ N + +L+ LN+S
Sbjct: 282 NKELRELHLQGNDLYELPKGLLHRLEQLLVLDLSGNQLTSHHVDNSTFAGLIRLIVLNLS 341
Query: 107 YNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEI 166
N ++ + TFK L L+ LD+ N I I + AF +L L L+ N + + D+ I
Sbjct: 342 NNALTRIGSKTFKELYFLQILDMRNNSIGHIEEGAFLPLYNLHTLNLAENRL-HTLDNRI 400
Query: 167 FSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHT 226
F+ L L L L+NN + V + N L L L+ N + T + + L+ L T
Sbjct: 401 FNGLYVLTKLTLNNNLVSIVESQAFRNC--SDLKELDLSSNQL-TEVPEAVQ-DLSMLKT 456
Query: 227 LALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNID 286
L L L L I L L L+L+ N +I+
Sbjct: 457 LDLGENQISEFKNNTFRNLNQLTGLRLIDNRIGNITVGMFQDLPRLSVLNLAKNRIQSIE 516
Query: 287 SVAFKSLFSLKLVKI--NLIPNLDSIDQXXXXXXXXXXXXXXXX-XAFSLTPLGTLKCDR 343
AF ++ +++ N + +++ I ++ P LK
Sbjct: 517 RGAFDKNTEIEAIRLDKNFLTDINGIFATLASLLWLNLSENHLVWFDYAFIP-SNLKW-- 573
Query: 344 LDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNLK 402
LD+ GN + + +K +++ ++ N + I + ++I+L + IN N+ +
Sbjct: 574 LDIHGNYIEALGNY-YKLQEEIRVTTLDASHNRITEIGAMSVPNSIEL--LFINNNI-IG 629
Query: 403 QLPSKLFQGNTNLKSVSLKGNSLSHLEASHFPLERISF------LDLSDNPLHCDCN 453
Q+ + F T L V L N LS + + + +S L NP CDC+
Sbjct: 630 QIQANTFVDKTRLARVDLYANVLSKISLNALRVAPVSAEKPVPEFYLGGNPFECDCS 686
Score = 163 (62.4 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 99/399 (24%), Positives = 160/399 (40%)
Query: 75 ELRSLDLSVNKINVLGSHNFEYQNKLLNLNI-SYNEISALSK------DTFKGLKELKTL 127
+L L + K+ + + FE L L + S+N + K +F+GLKEL L
Sbjct: 91 KLSELRIDACKLQRVPPNAFEGLMSLKRLTLESHNAVWGPGKTLELHGQSFQGLKELSEL 150
Query: 128 DLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNN------ 181
L N I + + + L+LL L+ N I E L + L N
Sbjct: 151 HLGDNNIRQLPEGVWCSMPSLQLLNLTQNRIRSAEFLGFSEKLCAGSALSNANGAVSGGS 210
Query: 182 --QILDVPNNVLSNLPH-------QSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXX 232
Q LDV N L +LP + L L L N I T+ N+ L++L L +
Sbjct: 211 ELQTLDVSFNELRSLPDAWGASRLRRLQTLSLQHNNISTLAPNALA-GLSSLRVLNISYN 269
Query: 233 XXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSN--IDSVAF 290
+ L +P L +L L+ LDLSGN ++ +D+ F
Sbjct: 270 HLVSLPSEAFAGNKELRELHLQGNDLYELPKGLLHRLEQLLVLDLSGNQLTSHHVDNSTF 329
Query: 291 KSLFSLKLVKINLIPNLDSIDQXXXXXXXXXXXXXXXXXAFSLTPLGTLKCDRLDLSGNN 350
L ++L+ +NL N F L L+ LD+ N+
Sbjct: 330 AGL--IRLIVLNLSNN---------------ALTRIGSKTFK--ELYFLQI--LDMRNNS 368
Query: 351 FSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNLKQLPSKLF 409
+I+ AF L++L +NL N L ++D R F L + +N N+ + + S+ F
Sbjct: 369 IGHIEEGAFLPLYNLHT--LNLAENRLHTLDNRIFNGLYVLTKLTLNNNL-VSIVESQAF 425
Query: 410 QGNTNLKSVSLKGNSLSHLEASHFPLERISFLDLSDNPL 448
+ ++LK + L N L+ + + L + LDL +N +
Sbjct: 426 RNCSDLKELDLSSNQLTEVPEAVQDLSMLKTLDLGENQI 464
Score = 126 (49.4 bits), Expect = 0.00045, P = 0.00045
Identities = 41/162 (25%), Positives = 74/162 (45%)
Query: 19 KAICPSRCQCF-DQKLEASCTDAG---LEVVPIQLNPEVQTIILRENRISNVHYT-LSFY 73
+ ICP C CF D + D G L +P ++ +V + L N + + L+
Sbjct: 756 EVICPGNCSCFHDATWATNIVDCGRQDLAALPNRIPQDVSDLYLDGNNMPELEVGHLTGR 815
Query: 74 IELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNK 133
LR+L L+ + + L + + L L++ N+++AL F+ L L+ L L N
Sbjct: 816 RNLRALYLNASNLMTLQNGSLAQLVNLRVLHLENNKLTALEGTEFRSLGLLRELYLHNNM 875
Query: 134 ISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRI 175
++ I+ F + LE+L L N ++ + SL+ L +
Sbjct: 876 LTHISNATFEPLVSLEVLRLDNNRLSSLPHLQYRHSLQGLTL 917
Score = 44 (20.5 bits), Expect = 4.1e-13, Sum P(2) = 4.1e-13
Identities = 7/25 (28%), Positives = 13/25 (52%)
Query: 493 QRVDRIIKNNHSLTIVLNNLKCSSP 517
QR++ + H + L N++C P
Sbjct: 691 QRINNLTTRQHPHVVDLGNIECLMP 715
>UNIPROTKB|Q8TF66 [details] [associations]
symbol:LRRC15 "Leucine-rich repeat-containing protein 15"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
GO:GO:0016021 EMBL:CH471052 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
SMART:SM00013 InterPro:IPR025875 Pfam:PF12799 EMBL:AC125362
EMBL:AC174158 EMBL:AB071037 EMBL:BC101064 EMBL:BC101065
EMBL:BK001325 IPI:IPI00152871 IPI:IPI00913924 RefSeq:NP_001128529.2
RefSeq:NP_570843.2 UniGene:Hs.288467 ProteinModelPortal:Q8TF66
SMR:Q8TF66 IntAct:Q8TF66 STRING:Q8TF66 PhosphoSite:Q8TF66
DMDM:30794642 PaxDb:Q8TF66 PeptideAtlas:Q8TF66 PRIDE:Q8TF66
Ensembl:ENST00000347624 Ensembl:ENST00000428839
Ensembl:ENST00000439944 GeneID:131578 KEGG:hsa:131578
UCSC:uc003ftt.3 UCSC:uc003ftu.3 CTD:131578 GeneCards:GC03M194075
H-InvDB:HIX0003982 HGNC:HGNC:20818 HPA:HPA035503 neXtProt:NX_Q8TF66
PharmGKB:PA134956867 HOGENOM:HOG000040004 HOVERGEN:HBG052343
InParanoid:Q8TF66 OMA:NHLEYIP OrthoDB:EOG4QVCCN ChiTaRS:LRRC15
GenomeRNAi:131578 NextBio:82942 Bgee:Q8TF66 CleanEx:HS_LRRC15
Genevestigator:Q8TF66 GermOnline:ENSG00000172061 Uniprot:Q8TF66
Length = 581
Score = 204 (76.9 bits), Expect = 4.3e-13, P = 4.3e-13
Identities = 97/381 (25%), Positives = 146/381 (38%)
Query: 78 SLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVI 137
SL + I L F + L+ L I NE+S ++ F+ L L+ L L+ NK+ V+
Sbjct: 57 SLQILNTHITELNESPFLNISALIALRIEKNELSRITPGAFRNLGSLRYLSLANNKLQVL 116
Query: 138 NKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQ 197
F+ LE L+LS N + + + FS +L+ L+L N + +P+ +L
Sbjct: 117 PIGLFQGLDSLESLLLSSNQLLQIQPAH-FSQCSNLKELQLHGNHLEYIPDGAFDHLV-- 173
Query: 198 SLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXX 257
L L L +N + + F L NL L L L L
Sbjct: 174 GLTKLNLGKNSLTHISPRVFQH-LGNLQVLRLYENRLTDIPMGTFDGLVNLQELALQQNQ 232
Query: 258 XXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQXXXX 316
+ L L LS N+ S + F L L ++ L N L +
Sbjct: 233 IGLLSPGLFHNNHNLQRLYLSNNHISQLPPSVFMQLPQLN--RLTLFGNSLKELSPGIFG 290
Query: 317 XXXXXXXXXXXXXAFSLTP---LGTLK-CDRLDLSGNNFSNIDSVAFKSLFSLKLVKINL 372
S P L+ L LS N S I AF L L+ +++L
Sbjct: 291 PMPNLRELWLYDNHISSLPDNVFSNLRQLQVLILSRNQISFISPGAFNGLTELR--ELSL 348
Query: 373 IPN-LDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEAS 431
N L +D F L+ + + N L+QLP +F L ++ L+ N L +L
Sbjct: 349 HTNALQDLDGNVFRMLANLQNISLQNN-RLRQLPGNIFANVNGLMAIQLQNNQLENLPLG 407
Query: 432 HFP-LERISFLDLSDNPLHCD 451
F L ++ L L DNP CD
Sbjct: 408 IFDHLGKLCELRLYDNPWRCD 428
Score = 187 (70.9 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 95/411 (23%), Positives = 159/411 (38%)
Query: 22 CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSFYIE-LRSLD 80
CPS C C + + CT A + VP L ++ + I+ ++ + I L +L
Sbjct: 25 CPSECTC-SRASQVECTGARIVAVPTPLPWNAMSLQILNTHITELNESPFLNISALIALR 83
Query: 81 LSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKT 140
+ N+++ + F L L+++ N++ L F+GL L++L LS N++ I
Sbjct: 84 IEKNELSRITPGAFRNLGSLRYLSLANNKLQVLPIGLFQGLDSLESLLLSSNQLLQIQPA 143
Query: 141 AFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLH 200
F +L+ L L N++ Y D F L L L L N + + V +L + L
Sbjct: 144 HFSQCSNLKELQLHGNHLEYIPDGA-FDHLVGLTKLNLGKNSLTHISPRVFQHLGN--LQ 200
Query: 201 YLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXA 260
L L EN + + +F L NL LAL L
Sbjct: 201 VLRLYENRLTDIPMGTFD-GLVNLQELALQQNQIGLLSPGLFHNNHNLQRLYLSNNHISQ 259
Query: 261 IPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLV-----KINLIPN--LDSIDQX 313
+P +L L L L GN+ + F + +L+ + I+ +P+ ++ Q
Sbjct: 260 LPPSVFMQLPQLNRLTLFGNSLKELSPGIFGPMPNLRELWLYDNHISSLPDNVFSNLRQL 319
Query: 314 XXXXXXXXXXXXXXXXAFSLTPLGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLI 373
AF+ G + L L N ++D F+ L +L+ I+L
Sbjct: 320 QVLILSRNQISFISPGAFN----GLTELRELSLHTNALQDLDGNVFRMLANLQ--NISLQ 373
Query: 374 PN-LDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGN 423
N L + F N+ I +N L+ LP +F L + L N
Sbjct: 374 NNRLRQLPGNIFA-NVNGLMAIQLQNNQLENLPLGIFDHLGKLCELRLYDN 423
>RGD|1303079 [details] [associations]
symbol:Amigo1 "adhesion molecule with Ig like domain 1"
species:10116 "Rattus norvegicus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005887 "integral to plasma membrane"
evidence=NAS] [GO:0007155 "cell adhesion" evidence=TAS] [GO:0007156
"homophilic cell adhesion" evidence=IPI] [GO:0007157 "heterophilic
cell-cell adhesion" evidence=IPI] [GO:0007409 "axonogenesis"
evidence=IDA] [GO:0007413 "axonal fasciculation" evidence=IDA]
[GO:0016021 "integral to membrane" evidence=IDA] [GO:0030424 "axon"
evidence=IEA] [GO:0042552 "myelination" evidence=IEP] [GO:0050772
"positive regulation of axonogenesis" evidence=IDA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 RGD:1303079 GO:GO:0005887 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0030424 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0042552 GO:GO:0050772 GO:GO:0007157 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 CTD:57463
eggNOG:NOG146733 HOGENOM:HOG000231327 HOVERGEN:HBG080231
OrthoDB:EOG4TB4BP GO:GO:0007413 GO:GO:0007156 EMBL:AY237729
IPI:IPI00201253 RefSeq:NP_996764.1 UniGene:Rn.116338
ProteinModelPortal:Q80ZD7 STRING:Q80ZD7 GeneID:295365
KEGG:rno:295365 UCSC:RGD:1303079 InParanoid:Q80ZD7 NextBio:639469
ArrayExpress:Q80ZD7 Genevestigator:Q80ZD7 Uniprot:Q80ZD7
Length = 493
Score = 203 (76.5 bits), Expect = 4.4e-13, Sum P(2) = 4.4e-13
Identities = 67/213 (31%), Positives = 103/213 (48%)
Query: 5 LTCIFLIL-ALTKLNKAI--CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILREN 61
L +FL+L + + + + CP+ C C L SC+ L VP L + L N
Sbjct: 14 LLSLFLLLFEVARAGRPVVSCPANCLCASNIL--SCSKQQLPNVPQSLPGYTALLDLSHN 71
Query: 62 RISNV--HYTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFK 119
+S + +T + L SL LS N +N + S F L L++S N + L + F
Sbjct: 72 NLSRLKAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFS 131
Query: 120 GLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYF--EDSEIFSSLKSLRILK 177
GL+ L+ L L N I V+++ AF D L+ L LS N I+ F E + + L L +L
Sbjct: 132 GLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNMISRFPLELIKDANRLPKLTLLD 191
Query: 178 LDNNQILDVPNNVLSNLPHQSLHYLYLNENLIE 210
L +N++ +P L LP + LYL+ N +E
Sbjct: 192 LSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLE 224
Score = 43 (20.2 bits), Expect = 4.4e-13, Sum P(2) = 4.4e-13
Identities = 13/52 (25%), Positives = 21/52 (40%)
Query: 555 VICILMYFIYRKRALWKNKINRNLKHQSSYVDNCMNSHPTPILMLYSTGDSD 606
V+ +L+Y W + + HQ + + M S TP + GD D
Sbjct: 384 VVLVLIYLYLTPCRCWCRGVEKPSSHQGDSLSSSMLS-TTPNHDPMAGGDKD 434
>UNIPROTKB|Q86UN3 [details] [associations]
symbol:RTN4RL2 "Reticulon-4 receptor-like 2" species:9606
"Homo sapiens" [GO:0009897 "external side of plasma membrane"
evidence=IEA] [GO:0045121 "membrane raft" evidence=IEA] [GO:0009986
"cell surface" evidence=IDA] [GO:0004872 "receptor activity"
evidence=IDA] [GO:0031103 "axon regeneration" evidence=TAS]
[GO:0046658 "anchored to plasma membrane" evidence=IDA]
GO:GO:0009986 GO:GO:0009897 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0004872
GO:GO:0045121 InterPro:IPR000372 SMART:SM00013 GO:GO:0046658
GO:GO:0031103 EMBL:AP002893 HOGENOM:HOG000116109 HOVERGEN:HBG063707
OrthoDB:EOG4FXR7G EMBL:AF532858 EMBL:AY250221 EMBL:BC113673
EMBL:BC117276 EMBL:BK001302 IPI:IPI00328746 RefSeq:NP_848665.1
UniGene:Hs.502618 ProteinModelPortal:Q86UN3 SMR:Q86UN3
IntAct:Q86UN3 STRING:Q86UN3 PhosphoSite:Q86UN3 DMDM:74759401
PaxDb:Q86UN3 PRIDE:Q86UN3 Ensembl:ENST00000335099 GeneID:349667
KEGG:hsa:349667 UCSC:uc010rjt.2 CTD:349667 GeneCards:GC11P057228
HGNC:HGNC:23053 HPA:CAB024870 MIM:610462 neXtProt:NX_Q86UN3
PharmGKB:PA134964131 InParanoid:Q86UN3 KO:K16661 OMA:WFREARV
PhylomeDB:Q86UN3 GenomeRNAi:349667 NextBio:99528
ArrayExpress:Q86UN3 Bgee:Q86UN3 CleanEx:HS_RTN4RL2
Genevestigator:Q86UN3 GermOnline:ENSG00000186907 Uniprot:Q86UN3
Length = 420
Score = 199 (75.1 bits), Expect = 4.5e-13, Sum P(2) = 4.5e-13
Identities = 58/207 (28%), Positives = 99/207 (47%)
Query: 7 CIFLILALTKLNKAICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNV 66
C+ L+L L CP C C+ SC VP+ L P Q + L+ N I +
Sbjct: 16 CLLLMLLALPLAAPSCPMLCTCYSSPPTVSCQANNFSSVPLSLPPSTQRLFLQNNLIRTL 75
Query: 67 HYTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNE-ISALSKDTFKGLKELK 125
+F L +L L N ++ + F + L L++ N + +L DTF+GL+ L+
Sbjct: 76 RPG-TFGSNLLTLWLFSNNLSTIYPGTFRHLQALEELDLGDNRHLRSLEPDTFQGLERLQ 134
Query: 126 TLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILD 185
+L L ++S + FR + L+ L L N++ + +D ++F+ L +L L L N++
Sbjct: 135 SLHLYRCQLSSLPGNIFRGLVSLQYLYLQENSLLHLQD-DLFADLANLSHLFLHGNRLRL 193
Query: 186 VPNNVLSNLPHQSLHYLYLNENLIETV 212
+ +V L SL L L+ N ++ V
Sbjct: 194 LTEHVFRGLG--SLDRLLLHGNRLQGV 218
Score = 132 (51.5 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 59/203 (29%), Positives = 81/203 (39%)
Query: 103 LNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFE 162
L + N I L TF G L TL L N +S I FR LE L L N
Sbjct: 65 LFLQNNLIRTLRPGTF-G-SNLLTLWLFSNNLSTIYPGTFRHLQALEELDLGDNRHLRSL 122
Query: 163 DSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLT 222
+ + F L+ L+ L L Q+ +P N+ L SL YLYL EN + + D+ F L
Sbjct: 123 EPDTFQGLERLQSLHLYRCQLSSLPGNIFRGLV--SLQYLYLQENSLLHLQDDLFA-DLA 179
Query: 223 NLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNF 282
NL L L L +L + LS L L L N+
Sbjct: 180 NLSHLFLHGNRLRLLTEHVFRGLGSLDRLLLHGNRLQGVHRAAFRGLSRLTILYLFNNSL 239
Query: 283 SNIDSVAFKSLFSLKLVKINLIP 305
+++ A L SL+ +++N P
Sbjct: 240 ASLPGEALADLPSLEFLRLNANP 262
Score = 122 (48.0 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 41/132 (31%), Positives = 62/132 (46%)
Query: 76 LRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKIS 135
L+SL L +++ L + F L L + N + L D F L L L L N++
Sbjct: 133 LQSLHLYRCQLSSLPGNIFRGLVSLQYLYLQENSLLHLQDDLFADLANLSHLFLHGNRLR 192
Query: 136 VINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLP 195
++ + FR L+ L+L N + + F L L IL L NN + +P L++LP
Sbjct: 193 LLTEHVFRGLGSLDRLLLHGNRLQGVHRAA-FRGLSRLTILYLFNNSLASLPGEALADLP 251
Query: 196 HQSLHYLYLNEN 207
SL +L LN N
Sbjct: 252 --SLEFLRLNAN 261
Score = 44 (20.5 bits), Expect = 4.5e-13, Sum P(2) = 4.5e-13
Identities = 6/21 (28%), Positives = 17/21 (80%)
Query: 510 NNLKCSSPPDIKGLEVKAVPE 530
+++ C++PP+ +G +++A+ E
Sbjct: 284 SDVTCATPPERQGRDLRALRE 304
Score = 37 (18.1 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 6/14 (42%), Positives = 9/14 (64%)
Query: 514 CSSPPDIKGLEVKA 527
C +PPD +G + A
Sbjct: 390 CQAPPDSRGPALSA 403
>WB|WBGene00006366 [details] [associations]
symbol:sym-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0005615 "extracellular space" evidence=IDA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0009792 GO:GO:0005615
InterPro:IPR003591 SMART:SM00369 GeneTree:ENSGT00690000101816
EMBL:Z79598 EMBL:AJ242473 PIR:T19939 RefSeq:NP_510426.1
UniGene:Cel.8136 ProteinModelPortal:G5EFP4 SMR:G5EFP4
EnsemblMetazoa:C44H4.3 GeneID:181555 KEGG:cel:CELE_C44H4.3
CTD:181555 WormBase:C44H4.3 OMA:NMERFWR NextBio:914424
Uniprot:G5EFP4
Length = 680
Score = 197 (74.4 bits), Expect = 4.9e-13, Sum P(2) = 4.9e-13
Identities = 85/315 (26%), Positives = 133/315 (42%)
Query: 7 CIFLILALTKLNKAICP------SRCQCFDQKLEA---SCTDA-GLEVVP---IQLNPEV 53
C+ L++ L A CP + C C D +E C+ GL +V EV
Sbjct: 6 CVALLVLPACL--AFCPKLFQNQTACSC-DSTVEGPVIKCSGHDGLRMVEKLSTTTTMEV 62
Query: 54 QTIILRENRISNVHYTLSFYIELRSLDLSVNKINVLGSHNFE-YQNKLLNLNISYNEISA 112
+ + L I V + ++ L LS N+I + H F +N + L++S N +
Sbjct: 63 RELALENADIIEVGPKAFKTLRIKKLILSNNRIEKIHDHAFTGLENVMQELSLSENNLKE 122
Query: 113 LSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLK- 171
+ GL+ L L L NKI I AF + L + L N I ++ F+++K
Sbjct: 123 VPTSALAGLRVLNILSLKCNKIENITTKAFVNMTSLIDVNLGCNQICSMA-ADTFANVKM 181
Query: 172 SLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXX 231
SL+ L LDNN + + P+ + N+ +L L++ N I + N F LT+L L+L
Sbjct: 182 SLQNLILDNNCMTEFPSKAVRNM--NNLIALHIKYNKINAIRQNDF-VNLTSLSMLSLNG 238
Query: 232 XXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFK 291
LH + L + L LDLS NNF++I F+
Sbjct: 239 NNISEIKGGALQNTPNLHYLYLNENNLQTLDNGVLEQFKQLQVLDLSFNNFTDITKEMFE 298
Query: 292 SLFSLKLVKINLIPN 306
L S++ +NL N
Sbjct: 299 GLESIQ--HLNLDSN 311
Score = 170 (64.9 bits), Expect = 4.6e-10, Sum P(2) = 4.6e-10
Identities = 82/334 (24%), Positives = 144/334 (43%)
Query: 123 ELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKS-LRILKLDNN 181
E++ L L I + AF+ TL ++ LILS N I D F+ L++ ++ L L N
Sbjct: 61 EVRELALENADIIEVGPKAFK-TLRIKKLILSNNRIEKIHD-HAFTGLENVMQELSLSEN 118
Query: 182 QILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXX 241
+ +VP + L+ L + L+ L L N IE + +F +T+L + L
Sbjct: 119 NLKEVPTSALAGL--RVLNILSLKCNKIENITTKAF-VNMTSLIDVNLGCNQICSMAADT 175
Query: 242 XVTLR-TLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVK 300
++ +L P+K + ++ L+ L + N + I F +L SL ++
Sbjct: 176 FANVKMSLQNLILDNNCMTEFPSKAVRNMNNLIALHIKYNKINAIRQNDFVNLTSLSMLS 235
Query: 301 INLIPNLDSIDQXXXXXXXXXXXXXXXXXAFSLTPLGTLKCDR----LDLSGNNFSNIDS 356
+N N+ I G L+ + LDLS NNF++I
Sbjct: 236 LNG-NNISEIKGGALQNTPNLHYLYLNENNLQTLDNGVLEQFKQLQVLDLSFNNFTDITK 294
Query: 357 VAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNL 415
F+ L S++ +NL N + ++ AF L ++ N L ++ + +G L
Sbjct: 295 EMFEGLESIQ--HLNLDSNRISAVAPGAFAGTPLL--LLWLPNNCLTEVSQQTLKGAPFL 350
Query: 416 KSVSLKGNSLSHL-EASHFPLERISFLDLSDNPL 448
+ VSL N++ + E S L + LDL++N +
Sbjct: 351 RMVSLSNNNIREVHELSFDHLPNLHTLDLANNKI 384
Score = 165 (63.1 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 45/147 (30%), Positives = 73/147 (49%)
Query: 74 IELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNK 133
+ L++L L N + S N L+ L+I YN+I+A+ ++ F L L L L+ N
Sbjct: 181 MSLQNLILDNNCMTEFPSKAVRNMNNLIALHIKYNKINAIRQNDFVNLTSLSMLSLNGNN 240
Query: 134 ISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSN 193
IS I A ++T +L L L+ NN+ D+ + K L++L L N D+ +
Sbjct: 241 ISEIKGGALQNTPNLHYLYLNENNLQTL-DNGVLEQFKQLQVLDLSFNNFTDITKEMFEG 299
Query: 194 LPHQSLHYLYLNENLIETVLDNSFPFT 220
L +S+ +L L+ N I V +F T
Sbjct: 300 L--ESIQHLNLDSNRISAVAPGAFAGT 324
Score = 147 (56.8 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 49/172 (28%), Positives = 81/172 (47%)
Query: 47 IQLNPEVQTIILRENRISNV-HYTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNI 105
+Q P + + L EN + + + L + +L+ LDLS N + FE + +LN+
Sbjct: 249 LQNTPNLHYLYLNENNLQTLDNGVLEQFKQLQVLDLSFNNFTDITKEMFEGLESIQHLNL 308
Query: 106 SYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSE 165
N ISA++ F G L L L N ++ +++ + L ++ LS NNI +
Sbjct: 309 DSNRISAVAPGAFAGTP-LLLLWLPNNCLTEVSQQTLKGAPFLRMVSLSNNNIREVHELS 367
Query: 166 IFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSF 217
F L +L L L NN+I+ + N LS + ++ L EN + V N F
Sbjct: 368 -FDHLPNLHTLDLANNKIMSLQNKSLSGPENLAVR---LQENPVVCV-KNGF 414
Score = 143 (55.4 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 83/349 (23%), Positives = 137/349 (39%)
Query: 109 EISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLH-LELLILSFNNITYFEDSEIF 167
+I + FK L+ +K L LS N+I I+ AF + ++ L LS NN+ S +
Sbjct: 71 DIIEVGPKAFKTLR-IKKLILSNNRIEKIHDHAFTGLENVMQELSLSENNLKEVPTSAL- 128
Query: 168 SSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTL 227
+ L+ L IL L N+I ++ N+ SL + L N I ++ ++F +L L
Sbjct: 129 AGLRVLNILSLKCNKIENITTKAFVNMT--SLIDVNLGCNQICSMAADTFANVKMSLQNL 186
Query: 228 ALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDS 287
L + L AI L++L L L+GNN S I
Sbjct: 187 ILDNNCMTEFPSKAVRNMNNLIALHIKYNKINAIRQNDFVNLTSLSMLSLNGNNISEIKG 246
Query: 288 VAFKSLFSLKLVKINLIPNLDSIDQXXXXXXXXXXXXXXXXXAFS-LTPL---GTLKCDR 343
A ++ +L + +N NL ++D F+ +T G
Sbjct: 247 GALQNTPNLHYLYLNE-NNLQTLDNGVLEQFKQLQVLDLSFNNFTDITKEMFEGLESIQH 305
Query: 344 LDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN--LDSIDQRAFVDNIQLETVIINENMNL 401
L+L N S + AF L L +PN L + Q+ L V ++ N N+
Sbjct: 306 LNLDSNRISAVAPGAFAGTPLLLL----WLPNNCLTEVSQQTLKGAPFLRMVSLSNN-NI 360
Query: 402 KQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFPLERISFLDLSDNPLHC 450
+++ F NL ++ L N + L+ + L +NP+ C
Sbjct: 361 REVHELSFDHLPNLHTLDLANNKIMSLQNKSLSGPENLAVRLQENPVVC 409
Score = 54 (24.1 bits), Expect = 4.9e-13, Sum P(2) = 4.9e-13
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 470 ETTTVAYEMTSNTSISPGTTTEAQRVDRIIKNNHSLTIV 508
E TT T+ T+++P TTTE ++ + + +T V
Sbjct: 461 EITTTTTTTTTTTTLAPTTTTEEEK-EETTETTEKVTTV 498
>ZFIN|ZDB-GENE-080327-16 [details] [associations]
symbol:lingo1a "leucine rich repeat and Ig domain
containing 1a" species:7955 "Danio rerio" [GO:0005515 "protein
binding" evidence=IPI] [GO:0031103 "axon regeneration"
evidence=IMP] InterPro:IPR007110 PROSITE:PS50835
ZFIN:ZDB-GENE-080327-16 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 GO:GO:0031103
InterPro:IPR026906 Pfam:PF13306 GeneTree:ENSGT00690000101682
EMBL:BX005076 EMBL:CR759783 IPI:IPI01024439
Ensembl:ENSDART00000149965 Bgee:F8W4D7 Uniprot:F8W4D7
Length = 619
Score = 206 (77.6 bits), Expect = 5.0e-13, Sum P(2) = 5.0e-13
Identities = 82/299 (27%), Positives = 127/299 (42%)
Query: 10 LILAL-TKLNKAI--CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNV 66
LIL L T L+ + CPSRC+C Q+ C L VP + E + + L +NRI +
Sbjct: 24 LILMLGTVLSGSATGCPSRCECNVQERSVLCHRKKLMSVPEGIPSETRLLDLSKNRIKTI 83
Query: 67 HYT-LSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELK 125
+ S + +L L+L+ N I+ + F L L + N++ + F GL L
Sbjct: 84 NPDEFSAFPQLEELELNENTISAIEPGAFNNLYGLQTLGLRSNKLKLIQLGVFTGLSNLT 143
Query: 126 TLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILD 185
LD+S NKI ++ F+D +L L + N++ + F L SL L L+ +
Sbjct: 144 KLDISENKIVILLDYMFQDLYNLRSLEVGDNDLVFISH-RAFHGLSSLEQLTLEKCNLTS 202
Query: 186 VPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTL 245
VP ++L H SL L L I ++ D SF L L L + +
Sbjct: 203 VPTEAFTHL-H-SLVTLRLRNLNINSIRDYSFK-RLYRLKVLEIANWPYLDTMTTNCLYG 259
Query: 246 RTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLI 304
L +IP L L L L++S N I+ L L+L ++ L+
Sbjct: 260 LNLTSLTITNANLTSIPYLALRHLVYLRFLNMSYNPIQMIEGNRLHDL--LRLQELYLV 316
Score = 185 (70.2 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 78/306 (25%), Positives = 132/306 (43%)
Query: 123 ELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQ 182
E + LDLS N+I IN F LE L L+ N I+ E F++L L+ L L +N+
Sbjct: 69 ETRLLDLSKNRIKTINPDEFSAFPQLEELELNENTISAIEPGA-FNNLYGLQTLGLRSNK 127
Query: 183 ILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXX 242
+ + V + L +L L ++EN I +LD F L NL +L +
Sbjct: 128 LKLIQLGVFTGL--SNLTKLDISENKIVILLDYMFQ-DLYNLRSLEVGDNDLVFISHRAF 184
Query: 243 VTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
L +L ++PT+ + L +LV L L N ++I +FK L+ LK+++I
Sbjct: 185 HGLSSLEQLTLEKCNLTSVPTEAFTHLHSLVTLRLRNLNINSIRDYSFKRLYRLKVLEIA 244
Query: 303 LIPNLDSIDQXXXXXXXXXXXXXXXXXAFSLTPLGTLKCDRLDLSGNNFSNIDSVAFKSL 362
P LD++ S+ L L +++ I + L
Sbjct: 245 NWPYLDTMTTNCLYGLNLTSLTITNANLTSIPYLALRHLVYLRFLNMSYNPIQMIEGNRL 304
Query: 363 FSL-KLVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSL 420
L +L ++ L+ L I+ +F L+ + ++ N L L +F NL++++L
Sbjct: 305 HDLLRLQELYLVGGRLSVIEPYSFRGLNYLKVLNVSSNF-LTTLEESVFHSVGNLETLAL 363
Query: 421 KGNSLS 426
N L+
Sbjct: 364 HDNPLA 369
Score = 155 (59.6 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 62/262 (23%), Positives = 114/262 (43%)
Query: 48 QLNPEVQTIILRENRISNVHYTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISY 107
+ N + ++++ ++ +V + E R LDLS N+I + F +L L ++
Sbjct: 44 ECNVQERSVLCHRKKLMSVPEGIPS--ETRLLDLSKNRIKTINPDEFSAFPQLEELELNE 101
Query: 108 NEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIF 167
N ISA+ F L L+TL L NK+ +I F +L L +S N I D +F
Sbjct: 102 NTISAIEPGAFNNLYGLQTLGLRSNKLKLIQLGVFTGLSNLTKLDISENKIVILLDY-MF 160
Query: 168 SSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTL 227
L +LR L++ +N ++ + + L SL L L + + +V +F T+LH+L
Sbjct: 161 QDLYNLRSLEVGDNDLVFISHRAFHGL--SSLEQLTLEKCNLTSVPTEAF----THLHSL 214
Query: 228 ALXXXXXXXXXXXXXVTLRTLHXXXXXXXXX----XAIPTKQLSKLSALVNLDLSGNNFS 283
+ + L+ + T L L+ L +L ++ N +
Sbjct: 215 VTLRLRNLNINSIRDYSFKRLYRLKVLEIANWPYLDTMTTNCLYGLN-LTSLTITNANLT 273
Query: 284 NIDSVAFKSLFSLKLVKINLIP 305
+I +A + L L+ + ++ P
Sbjct: 274 SIPYLALRHLVYLRFLNMSYNP 295
Score = 153 (58.9 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 75/308 (24%), Positives = 125/308 (40%)
Query: 150 LLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLI 209
LL LS N I E FS+ L L+L+ N I + +NL L L L N +
Sbjct: 72 LLDLSKNRIKTINPDE-FSAFPQLEELELNENTISAIEPGAFNNL--YGLQTLGLRSNKL 128
Query: 210 ETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKL 269
+ + F L+NL L + L L I + L
Sbjct: 129 KLIQLGVFT-GLSNLTKLDISENKIVILLDYMFQDLYNLRSLEVGDNDLVFISHRAFHGL 187
Query: 270 SALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQXXXXXXXXXXXXXXXXX 329
S+L L L N +++ + AF L SL +++ + N++SI
Sbjct: 188 SSLEQLTLEKCNLTSVPTEAFTHLHSLVTLRLRNL-NINSIRDYSFKRLYRLKVLEIANW 246
Query: 330 AF--SLTP--LGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFV 385
+ ++T L L L ++ N ++I +A + L L+ + ++ P + I+
Sbjct: 247 PYLDTMTTNCLYGLNLTSLTITNANLTSIPYLALRHLVYLRFLNMSYNP-IQMIEGNRLH 305
Query: 386 DNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHF-PLERISFLDLS 444
D ++L+ + + L + F+G LK +++ N L+ LE S F + + L L
Sbjct: 306 DLLRLQELYLVGG-RLSVIEPYSFRGLNYLKVLNVSSNFLTTLEESVFHSVGNLETLALH 364
Query: 445 DNPLHCDC 452
DNPL CDC
Sbjct: 365 DNPLACDC 372
Score = 43 (20.2 bits), Expect = 5.0e-13, Sum P(2) = 5.0e-13
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 514 CSSPPDIKGLEVKAVPE 530
CSSP ++G E K P+
Sbjct: 393 CSSPEFVQGKEFKDFPD 409
>UNIPROTKB|E2QXQ1 [details] [associations]
symbol:SLITRK5 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0007409 "axonogenesis" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 GeneTree:ENSGT00680000099775
CTD:26050 OMA:HHRGPAL EMBL:AAEX03013291 RefSeq:XP_849372.1
Ensembl:ENSCAFT00000008533 GeneID:485513 KEGG:cfa:485513
NextBio:20859499 Uniprot:E2QXQ1
Length = 958
Score = 175 (66.7 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 63/196 (32%), Positives = 95/196 (48%)
Query: 22 CPSRCQC----FDQKLEASCTDAGLE-VVPIQLNP-EVQTIILRENRISNVHYTLSFYIE 75
CP+ C C D L +C + +E + +Q P + + L EN I+ V S ++E
Sbjct: 374 CPTACTCNLQISDLGLNVNCQERKIESIAELQPKPYNPKKMYLTENYIAVVRR--SDFLE 431
Query: 76 LRSLDL---SVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYN 132
LDL N+I+++ F L L ++ N I LS + F GL+ L+ L L YN
Sbjct: 432 ATGLDLLHLGNNRISMIQDRAFGDLTNLRRLYLNGNRIERLSPELFYGLQSLQYLFLQYN 491
Query: 133 KISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVP-NNVL 191
I I F +L+LL L+ NN+ S +FS L LR L L +N +P + VL
Sbjct: 492 LIREIQSGTFDPVPNLQLLFLN-NNLLQTMPSGVFSGLTLLR-LNLRSNHFTSLPVSGVL 549
Query: 192 SNLPHQSLHYLYLNEN 207
L +SL + L++N
Sbjct: 550 DQL--KSLIQIDLHDN 563
Score = 142 (55.0 bits), Expect = 5.0e-13, Sum P(2) = 5.0e-13
Identities = 63/223 (28%), Positives = 107/223 (47%)
Query: 3 YFLTCIFLILALT-KLNKAICPSRCQCFDQK--LEASCTDAGLEVVPIQLNPE---VQTI 56
+ LT + L A T IC + C C ++ L SC + G+ + +++P + +
Sbjct: 28 FALTSLVLSCAETIDYYGEICDNACPCEEKDGILTVSCENRGI-ISLSEISPPRFPIYHL 86
Query: 57 ILRENRISNVHYTLSF--YIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALS 114
+L N ++ + Y F Y L L N I + + F L L+++ N++ L
Sbjct: 87 LLSGNLLNRL-YPNEFVNYTGASILHLGSNVIQDIETGAFHGLRGLRRLHLNNNKLELLR 145
Query: 115 KDTFKGLKELKTLDLSYNKISVINKTAFRDTLHL-ELLILSFNNITYFEDSEIFSSLKSL 173
DTF GL+ L+ L + YN ISVI AF LHL ++LIL+ N ++ ++ +F
Sbjct: 146 DDTFLGLESLEYLQVDYNYISVIEPNAF-GKLHLLQVLILNDNLLSSLPNN-LF------ 197
Query: 174 RILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNS 216
R + L + LD+ N L LP+ L L + ++E L+ +
Sbjct: 198 RFVPLTH---LDLRGNRLKLLPYVGL--LQHMDKVVELQLEEN 235
Score = 139 (54.0 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 55/201 (27%), Positives = 89/201 (44%)
Query: 93 NFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLI 152
N + + LN+N +I ++++ K K + L+ N I+V+ ++ F + L+LL
Sbjct: 381 NLQISDLGLNVNCQERKIESIAELQPKPYNP-KKMYLTENYIAVVRRSDFLEATGLDLLH 439
Query: 153 LSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETV 212
L N I+ +D F L +LR L L+ N+I + + L QSL YL+L NLI +
Sbjct: 440 LGNNRISMIQD-RAFGDLTNLRRLYLNGNRIERLSPELFYGL--QSLQYLFLQYNLIREI 496
Query: 213 LDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQ-LSKLSA 271
+F + NL L L L TL ++P L +L +
Sbjct: 497 QSGTFD-PVPNLQLLFLNNNLLQTMPSGVFSGL-TLLRLNLRSNHFTSLPVSGVLDQLKS 554
Query: 272 LVNLDLSGNNFS-NIDSVAFK 291
L+ +DL N + D V K
Sbjct: 555 LIQIDLHDNPWDCTCDVVGMK 575
Score = 116 (45.9 bits), Expect = 5.0e-13, Sum P(2) = 5.0e-13
Identities = 39/117 (33%), Positives = 61/117 (52%)
Query: 343 RLDLSGNNFSNIDSVAFKSLFSLK--LVKINLIPNLDS--IDQRAFVDNIQLETVIINEN 398
RL L+GN + F L SL+ ++ NLI + S D V N+QL + +N N
Sbjct: 461 RLYLNGNRIERLSPELFYGLQSLQYLFLQYNLIREIQSGTFDP---VPNLQL--LFLNNN 515
Query: 399 MNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHF--PLERISFLDLSDNPLHCDCN 453
+ L+ +PS +F G T L+ ++L+ N + L S L+ + +DL DNP C C+
Sbjct: 516 L-LQTMPSGVFSGLTLLR-LNLRSNHFTSLPVSGVLDQLKSLIQIDLHDNPWDCTCD 570
Score = 111 (44.1 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 40/126 (31%), Positives = 59/126 (46%)
Query: 100 LLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNIT 159
+ +L +S N ++ L + F L L N I I AF L L L+ N +
Sbjct: 83 IYHLLLSGNLLNRLYPNEFVNYTGASILHLGSNVIQDIETGAFHGLRGLRRLHLNNNKLE 142
Query: 160 YFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPF 219
D + F L+SL L++D N I + N L H L L LN+NL+ ++ +N F F
Sbjct: 143 LLRD-DTFLGLESLEYLQVDYNYISVIEPNAFGKL-HL-LQVLILNDNLLSSLPNNLFRF 199
Query: 220 T-LTNL 224
LT+L
Sbjct: 200 VPLTHL 205
Score = 62 (26.9 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 20/80 (25%), Positives = 39/80 (48%)
Query: 369 KINLIPNLDSIDQRA-FVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSH 427
K+ L N ++ +R+ F++ L+ + + N + + + F TNL+ + L GN +
Sbjct: 413 KMYLTENYIAVVRRSDFLEATGLDLLHLGNN-RISMIQDRAFGDLTNLRRLYLNGNRIER 471
Query: 428 LEASHF-PLERISFLDLSDN 446
L F L+ + +L L N
Sbjct: 472 LSPELFYGLQSLQYLFLQYN 491
Score = 46 (21.3 bits), Expect = 8.1e-06, Sum P(2) = 8.1e-06
Identities = 36/166 (21%), Positives = 69/166 (41%)
Query: 261 IPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLK--LVKINLIPNLDSIDQXXXXXX 318
I + L+ L L L+GN + F L SL+ ++ NLI + S
Sbjct: 448 IQDRAFGDLTNLRRLYLNGNRIERLSPELFYGLQSLQYLFLQYNLIREIQSGTFDPVPNL 507
Query: 319 XXXXXXXXXXXAFSLTPLGTLKCDRLDLSGNNFSNIDSVAFKSLFSLK-LVKINLIPN-- 375
L RL+L N+F+++ L LK L++I+L N
Sbjct: 508 QLLFLNNNLLQTMPSGVFSGLTLLRLNLRSNHFTSLPVSGV--LDQLKSLIQIDLHDNPW 565
Query: 376 ---LDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSV 418
D + + +V+ +++ V+++E + + P K + T+++S+
Sbjct: 566 DCTCDVVGMKLWVEQLKVG-VLVDEV--ICKAPKKFAE--TDMRSI 606
>UNIPROTKB|E2RFW7 [details] [associations]
symbol:OMG "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048683 "regulation of collateral sprouting
of intact axon in response to injury" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0031102 "neuron
projection regeneration" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 InterPro:IPR003591 SMART:SM00369 GO:GO:0031102
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 InterPro:IPR025875
Pfam:PF12799 OMA:SSNKLWT GO:GO:0048683 EMBL:AAEX03006655
ProteinModelPortal:E2RFW7 Ensembl:ENSCAFT00000029565
GeneTree:ENSGT00690000102271 Uniprot:E2RFW7
Length = 440
Score = 201 (75.8 bits), Expect = 5.0e-13, P = 5.0e-13
Identities = 61/212 (28%), Positives = 104/212 (49%)
Query: 8 IFLILALTKLNKAICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVH 67
+F++L LT ICP +C C ++ C+ L +P L + + L N +++H
Sbjct: 12 LFILLFLTPGILCICPLQCICTERHRHVDCSGRNLTTLPSGLQENIIHLNLSYNHFTDLH 71
Query: 68 YTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTL 127
L+ Y LR+LD+S N++ L + + L N++ + N I L K LK L
Sbjct: 72 NQLTQYTNLRTLDISNNRLESLPA---QLPRSLWNMSAANNNIKLLDKSDTAYQWNLKYL 128
Query: 128 DLSYNKISVINKTAFRDTLH-LELLILSFNNITYFEDSEIFSSLKS-LRILKLDNNQILD 185
D+S N + + ++TL LE+L LS N + + +++ S L I+ L NN +
Sbjct: 129 DVSKNMLEKV--VLIKNTLRSLEVLNLSSNKLW-----TVPTNMPSKLHIVDLSNNSLTQ 181
Query: 186 VPNNVLSNLPHQSLHYLYLNENLIETVLDNSF 217
+ L+NL + L +LYL+ N + D +F
Sbjct: 182 ILPGTLTNLTN--LTHLYLHNNKFTFIPDQAF 211
>RGD|1309087 [details] [associations]
symbol:Lrrc32 "leucine rich repeat containing 32" species:10116
"Rattus norvegicus" [GO:0010628 "positive regulation of gene
expression" evidence=IEA] [GO:0046007 "negative regulation of
activated T cell proliferation" evidence=IEA] [GO:0050710 "negative
regulation of cytokine secretion" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 RGD:1309087 EMBL:CH473956
InterPro:IPR003591 SMART:SM00369 GO:GO:0010628 InterPro:IPR000372
SMART:SM00013 GO:GO:0046007 GO:GO:0050710
GeneTree:ENSGT00700000104185 CTD:2615 OMA:CCGNGWL OrthoDB:EOG4DBTF0
IPI:IPI00368447 RefSeq:NP_001163905.1 UniGene:Rn.66859
Ensembl:ENSRNOT00000020520 GeneID:293135 KEGG:rno:293135
UCSC:RGD:1309087 NextBio:635427 Uniprot:D3ZVD5
Length = 663
Score = 190 (71.9 bits), Expect = 5.1e-13, Sum P(2) = 5.1e-13
Identities = 70/230 (30%), Positives = 112/230 (48%)
Query: 8 IFLILALTKLNKAICPSRCQ--CFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISN 65
I ++LA+ L AI R Q C EA C L VP L+ ++Q + L NR+ +
Sbjct: 5 ILILLAMLTLGLAISQRRDQVPCRTVNKEALCHGLSLLQVPSVLSLDIQALYLSGNRLQS 64
Query: 66 VHYT-LSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKEL 124
+ + LSFY LR LDLS N+I+ L F+ L +LN+++N ++A GL L
Sbjct: 65 ILVSPLSFYTALRHLDLSDNEISFLQPGVFQALPYLEHLNLAHNRLAAGMALNSGGLGRL 124
Query: 125 K---TLDLSYNKI--SVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLD 179
+LDLS N + S++ + + L L L+ N++T F + ++ L L
Sbjct: 125 PLVVSLDLSGNSLHGSLVERL-LGEAPRLRTLSLAENSLTRLA-RHTFWGMPAMEQLDLH 182
Query: 180 NNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLAL 229
+N ++D+ + LP L +L L+ N + + D F+L L L L
Sbjct: 183 SNVLMDIEDGAFEALPQ--LTHLNLSRNSLTCISD----FSLQQLQVLDL 226
Score = 146 (56.5 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 97/417 (23%), Positives = 168/417 (40%)
Query: 51 PEVQTIILRENRI--SNVHYTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYN 108
P V ++ L N + S V L LR+L L+ N + L H F + L++ N
Sbjct: 125 PLVVSLDLSGNSLHGSLVERLLGEAPRLRTLSLAENSLTRLARHTFWGMPAMEQLDLHSN 184
Query: 109 EISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFS 168
+ + F+ L +L L+LS N ++ I+ + + L++L LS N+I F+ +
Sbjct: 185 VLMDIEDGAFEALPQLTHLNLSRNSLTCISDFSLQQ---LQVLDLSCNSIETFQTAPESQ 241
Query: 169 SLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLA 228
+ L L L N++L P+ L+ P L YL ++ NLI+ L P +LH +
Sbjct: 242 AQFQLAWLDLRENKLLHFPD--LAMFPR--LIYLNVSNNLIQ--LPTGLPQDSEDLHAPS 295
Query: 229 LXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAI---PTKQLSKLSALVNLDLSGNNFSNI 285
++ L I P L L++L L+LS N +
Sbjct: 296 EGWSASLLSNPSRNASIHPLSQLLNLDLSYNEIELVPAGFLEHLTSLRFLNLSRNCLRSF 355
Query: 286 DSVAFKSLFSLKLVKINLIPN-LDSIDQXXXXXXXXXXXXXXXXXAFSLTPL---GTLKC 341
++ SL L L ++L N L++++ L P G
Sbjct: 356 EARRAGSLPCLVL--LDLSHNVLEALELGTKVLGSLKTLLLQDNTLRELPPYTFAGLASL 413
Query: 342 DRLDLSGNNFSNIDSVA---------FKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLE 391
RL+L GN S A F + +L +N+ N ++++ +F+ + L
Sbjct: 414 QRLNLQGNQVSPCGGQAEPGPPGCVDFSGIPTLHF--LNMAGNSMETLRAGSFL-HTPLT 470
Query: 392 TVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFPLERISFLDLSDNPL 448
+ ++ N L L +L+ + L+GN L L R+ L+L++N L
Sbjct: 471 ELDLSANPGLDVATGALVGLEASLEVLELQGNGLVVLRVDLPCFRRLKRLNLAENRL 527
Score = 138 (53.6 bits), Expect = 8.9e-06, P = 8.9e-06
Identities = 93/385 (24%), Positives = 153/385 (39%)
Query: 74 IELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNK 133
+++++L LS N++ + + L +L++S NEIS L F+ L L+ L+L++N+
Sbjct: 50 LDIQALYLSGNRLQSILVSPLSFYTALRHLDLSDNEISFLQPGVFQALPYLEHLNLAHNR 109
Query: 134 ISV---INKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNV 190
++ +N + L LS N++ + LR L L N + + +
Sbjct: 110 LAAGMALNSGGLGRLPLVVSLDLSGNSLHGSLVERLLGEAPRLRTLSLAENSLTRLARHT 169
Query: 191 LSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHX 250
+P ++ L L+ N++ + D +F L L L L L+ L
Sbjct: 170 FWGMP--AMEQLDLHSNVLMDIEDGAFE-ALPQLTHLNLSRNSLTCISDFSLQQLQVLDL 226
Query: 251 XXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVA-FKSLFSLKLVKINLI--PN- 306
P Q L LDL N + +A F L L V NLI P
Sbjct: 227 SCNSIETFQTAPESQAQ--FQLAWLDLRENKLLHFPDLAMFPRLIYLN-VSNNLIQLPTG 283
Query: 307 --LDSIDQXXXXXXXXXXXXXXXXXAFSLTPLGTLKCDRLDLSGNNFSNIDSVAFKSLFS 364
DS D S+ PL L LDLS N + + + L S
Sbjct: 284 LPQDSEDLHAPSEGWSASLLSNPSRNASIHPLSQLL--NLDLSYNEIELVPAGFLEHLTS 341
Query: 365 LKLVKINLIPN-LDSIDQRAFVDNIQLETVIINEN-MNLKQLPSKLFQGNTNLKSVSLKG 422
L+ +NL N L S + R L + ++ N + +L +K+ G+ LK++ L+
Sbjct: 342 LRF--LNLSRNCLRSFEARRAGSLPCLVLLDLSHNVLEALELGTKVL-GS--LKTLLLQD 396
Query: 423 NSLSHLEASHFP-LERISFLDLSDN 446
N+L L F L + L+L N
Sbjct: 397 NTLRELPPYTFAGLASLQRLNLQGN 421
Score = 125 (49.1 bits), Expect = 0.00023, P = 0.00023
Identities = 101/419 (24%), Positives = 172/419 (41%)
Query: 51 PEVQTIILRENRISNV-HYTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNE 109
P ++T+ L EN ++ + +T + LDL N + + FE +L +LN+S N
Sbjct: 150 PRLRTLSLAENSLTRLARHTFWGMPAMEQLDLHSNVLMDIEDGAFEALPQLTHLNLSRNS 209
Query: 110 ISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLEL--LILSFNNITYFEDSEIF 167
++ +S F L++L+ LDLS N I +TA +L L L N + +F D +F
Sbjct: 210 LTCISD--FS-LQQLQVLDLSCNSIETF-QTAPESQAQFQLAWLDLRENKLLHFPDLAMF 265
Query: 168 SSLKSLRILKLDNNQILDVPNNVLSNLPHQS--LHYLY--LNENLIETVLDNSFPFTLTN 223
L L + +N ++ +P + LP S LH + +L+ N+ L+
Sbjct: 266 PRLIYLNV----SNNLIQLP----TGLPQDSEDLHAPSEGWSASLLSNPSRNASIHPLSQ 317
Query: 224 LHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFS 283
L L L L +L + ++ L LV LDLS N
Sbjct: 318 LLNLDLSYNEIELVPAGFLEHLTSLRFLNLSRNCLRSFEARRAGSLPCLVLLDLSHNVLE 377
Query: 284 NIDSVAFKSLFSLK--LVKINLI---P-----NLDSID----QXXXXXXXXXXXXXXXXX 329
++ + K L SLK L++ N + P L S+ Q
Sbjct: 378 ALE-LGTKVLGSLKTLLLQDNTLRELPPYTFAGLASLQRLNLQGNQVSPCGGQAEPGPPG 436
Query: 330 AFSLTPLGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFVD-NI 388
+ + TL L+++GN+ + + +F L + ++ P LD + A V
Sbjct: 437 CVDFSGIPTLHF--LNMAGNSMETLRAGSFLHT-PLTELDLSANPGLD-VATGALVGLEA 492
Query: 389 QLETVIINEN-MNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFPLERISFLDLSDN 446
LE + + N + + ++ F+ LK ++L N LSHL A + + LDL +N
Sbjct: 493 SLEVLELQGNGLVVLRVDLPCFR---RLKRLNLAENRLSHLPAWTRAVS-LEVLDLRNN 547
Score = 61 (26.5 bits), Expect = 5.1e-13, Sum P(2) = 5.1e-13
Identities = 25/86 (29%), Positives = 40/86 (46%)
Query: 344 LDLSGNNFS--NIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFVDNIQLETVIINENMNL 401
L+L GN +D F+ L L L + N + +L A+ + LE + + N +
Sbjct: 497 LELQGNGLVVLRVDLPCFRRLKRLNLAE-NRLSHLP-----AWTRAVSLEVLDLRNN-SF 549
Query: 402 KQLPSKLFQG-NTNLKSVSLKGNSLS 426
LP G T+L+ + L+GN LS
Sbjct: 550 SLLPGNAMGGLETSLRRLYLQGNPLS 575
>MGI|MGI:2653612 [details] [associations]
symbol:Amigo1 "adhesion molecule with Ig like domain 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=ISO] [GO:0007156 "homophilic
cell adhesion" evidence=ISO;ISS] [GO:0007157 "heterophilic
cell-cell adhesion" evidence=ISO;ISS] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IEA] [GO:0007409 "axonogenesis" evidence=ISO]
[GO:0007413 "axonal fasciculation" evidence=ISO;ISS] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=ISO] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0042552 "myelination" evidence=ISS] [GO:0050772 "positive
regulation of axonogenesis" evidence=ISO;ISS] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:2653612 GO:GO:0016021 GO:GO:0005886
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003599
SMART:SM00409 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0042552 GO:GO:0050772 GO:GO:0007157
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
CTD:57463 eggNOG:NOG146733 HOGENOM:HOG000231327 HOVERGEN:HBG080231
OrthoDB:EOG4TB4BP GO:GO:0007413 GO:GO:0007156 EMBL:AY237008
EMBL:AB167509 EMBL:AK035960 EMBL:AK173118 EMBL:AL671854
EMBL:BC010598 EMBL:BC022907 IPI:IPI00122248 IPI:IPI00608009
RefSeq:NP_001004293.1 RefSeq:NP_666249.2 UniGene:Mm.275752 PDB:2XOT
PDBsum:2XOT ProteinModelPortal:Q80ZD8 SMR:Q80ZD8 STRING:Q80ZD8
PhosphoSite:Q80ZD8 PRIDE:Q80ZD8 Ensembl:ENSMUST00000050909
Ensembl:ENSMUST00000106656 Ensembl:ENSMUST00000106659 GeneID:229715
KEGG:mmu:229715 GeneTree:ENSGT00530000063545 InParanoid:Q80ZD8
NextBio:379639 Bgee:Q80ZD8 CleanEx:MM_AMIGO1 Genevestigator:Q80ZD8
GermOnline:ENSMUSG00000050947 Uniprot:Q80ZD8
Length = 492
Score = 202 (76.2 bits), Expect = 5.7e-13, Sum P(2) = 5.7e-13
Identities = 66/213 (30%), Positives = 102/213 (47%)
Query: 5 LTCIFLIL-ALTKLNKAI--CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILREN 61
L +FL+L + + +++ CP+ C C L SC+ L VP L + L N
Sbjct: 14 LLSVFLLLFEVARAGRSVVSCPANCLCASNIL--SCSKQQLPNVPQSLPSYTALLDLSHN 71
Query: 62 RISNVH--YTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFK 119
+S + +T + L SL LS N +N + S F L L++S N + L + F
Sbjct: 72 NLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFS 131
Query: 120 GLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIF--SSLKSLRILK 177
L+ L+ L L N I V+++ AF D L+ L LS N I+ F I + L L +L
Sbjct: 132 DLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLD 191
Query: 178 LDNNQILDVPNNVLSNLPHQSLHYLYLNENLIE 210
L +N++ +P L LP + LYL+ N +E
Sbjct: 192 LSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLE 224
Score = 43 (20.2 bits), Expect = 5.7e-13, Sum P(2) = 5.7e-13
Identities = 13/52 (25%), Positives = 21/52 (40%)
Query: 555 VICILMYFIYRKRALWKNKINRNLKHQSSYVDNCMNSHPTPILMLYSTGDSD 606
V+ +L+Y W + + HQ + + M S TP + GD D
Sbjct: 383 VVLVLIYLYLTPCRCWCRGVEKPSSHQGDSLSSSMLS-TTPNHDPMAGGDKD 433
>RGD|1310827 [details] [associations]
symbol:Tril "TLR4 interactor with leucine-rich repeats"
species:10116 "Rattus norvegicus" [GO:0001530 "lipopolysaccharide
binding" evidence=ISO] [GO:0002718 "regulation of cytokine
production involved in immune response" evidence=ISO] [GO:0006954
"inflammatory response" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0034142 "toll-like receptor 4 signaling
pathway" evidence=ISO] [GO:0045087 "innate immune response"
evidence=IEA] [GO:0046696 "lipopolysaccharide receptor complex"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
RGD:1310827 GO:GO:0016021 GO:GO:0006954 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0045087 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00700000104056 Pfam:PF01463 HSSP:P07359 CTD:9865
HOVERGEN:HBG066060 OMA:EFPCDRF OrthoDB:EOG4KWJSW EMBL:BC100659
IPI:IPI00358213 RefSeq:NP_001029182.1 UniGene:Rn.25045
STRING:Q496Z2 Ensembl:ENSRNOT00000036951 GeneID:362364
KEGG:rno:362364 UCSC:RGD:1310827 InParanoid:Q496Z2 NextBio:679662
Genevestigator:Q496Z2 Uniprot:Q496Z2
Length = 811
Score = 205 (77.2 bits), Expect = 5.9e-13, P = 5.9e-13
Identities = 79/298 (26%), Positives = 130/298 (43%)
Query: 12 LALTKLNKAICPSRCQCFDQKLEASCTDAGLEVVPIQLN-PEVQTII---LRENRISNVH 67
LA +++CP RC C CT+ GL VP + P Q ++ L N I+N+
Sbjct: 17 LAFPPRAESVCPERCDC-QHPQHLLCTNRGLRAVPKTSSLPSPQDVLTYSLGGNFITNIT 75
Query: 68 YTLSFYI--ELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELK 125
F+ +LR LDL N+I L FE ++L L + N + AL+ T L++L+
Sbjct: 76 -AFDFHRLGQLRRLDLQYNQIRSLHPKTFEKLSRLEELYLGNNLLQALAPGTLAPLRKLR 134
Query: 126 TLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILD 185
L + N+I +++ +F L L L N + D+ +F+ L +L L L+ N+I
Sbjct: 135 ILYANGNEIGRLSRGSFEGLESLVKLRLDGNVLGALPDA-VFAPLGNLLYLHLEANRIRF 193
Query: 186 VPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFT-LTNLHTLALXXXXXXXXXXXXXVT 244
+ N + L L +L L+ N ++ L ++ F L +L TL L
Sbjct: 194 LGKNAFTQLG--KLRFLNLSANELQPSLRHAATFVPLRSLSTLILSANSLQHLGPRVFQH 251
Query: 245 LRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
L L + + L AL L L GN + + + L SL+ + ++
Sbjct: 252 LPRLGLLSLSGNQLTHLAPEAFWGLEALRELRLEGNRLNQLPLTLLEPLHSLEALDLS 309
Score = 130 (50.8 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 78/305 (25%), Positives = 110/305 (36%)
Query: 157 NITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNS 216
NIT F+ F L LR L L NQI + L L LYL NL++ + +
Sbjct: 73 NITAFD----FHRLGQLRRLDLQYNQIRSLHPKTFEKLSR--LEELYLGNNLLQALAPGT 126
Query: 217 FPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLD 276
L L L L +L A+P + L L+ L
Sbjct: 127 LA-PLRKLRILYANGNEIGRLSRGSFEGLESLVKLRLDGNVLGALPDAVFAPLGNLLYLH 185
Query: 277 LSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQXXXXXXXXXXXXXXXXXAFSLTP 335
L N + AF L L+ +NL N L + A SL
Sbjct: 186 LEANRIRFLGKNAFTQLGKLRF--LNLSANELQPSLRHAATFVPLRSLSTLILSANSLQH 243
Query: 336 LGTL------KCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNI 388
LG + L LSGN +++ AF L +L+ ++ L N L+ +
Sbjct: 244 LGPRVFQHLPRLGLLSLSGNQLTHLAPEAFWGLEALR--ELRLEGNRLNQLPLTLLEPLH 301
Query: 389 QLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFPLERISF-LDLSDNP 447
LE + ++ N L L F L+ +SL+ N+LS L F + LDL N
Sbjct: 302 SLEALDLSGN-ELSALHPATFGHQGRLRELSLRDNALSALSGDIFAASPALYRLDLDGNG 360
Query: 448 LHCDC 452
CDC
Sbjct: 361 WTCDC 365
Score = 122 (48.0 bits), Expect = 0.00063, P = 0.00063
Identities = 42/139 (30%), Positives = 74/139 (53%)
Query: 73 YIELRSLD---LSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDL 129
++ LRSL LS N + LG F++ +L L++S N+++ L+ + F GL+ L+ L L
Sbjct: 225 FVPLRSLSTLILSANSLQHLGPRVFQHLPRLGLLSLSGNQLTHLAPEAFWGLEALRELRL 284
Query: 130 SYNKISVINKTAFRDTLH-LELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPN 188
N+++ + T + LH LE L LS N ++ + F LR L L +N + +
Sbjct: 285 EGNRLNQLPLTLL-EPLHSLEALDLSGNELSALHPAT-FGHQGRLRELSLRDNALSALSG 342
Query: 189 NVLSNLPHQSLHYLYLNEN 207
++ + P +L+ L L+ N
Sbjct: 343 DIFAASP--ALYRLDLDGN 359
>ZFIN|ZDB-GENE-071002-1 [details] [associations]
symbol:tlr20al "toll-like receptor 20a, like"
species:7955 "Danio rerio" [GO:0007165 "signal transduction"
evidence=IEA] Pfam:PF00560 InterPro:IPR000157 InterPro:IPR001611
Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450 SMART:SM00255
ZFIN:ZDB-GENE-071002-1 GO:GO:0007165 InterPro:IPR003591
SMART:SM00369 GO:GO:0005622 SUPFAM:SSF52200
GeneTree:ENSGT00680000099674 EMBL:CR392351 IPI:IPI00836032
ProteinModelPortal:F1QRG0 Ensembl:ENSDART00000124265 Uniprot:F1QRG0
Length = 973
Score = 206 (77.6 bits), Expect = 6.0e-13, P = 6.0e-13
Identities = 63/181 (34%), Positives = 95/181 (52%)
Query: 51 PEVQTIILRENRISNV--HYTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYN 108
P +Q ++L+ RI + H + F + L++L L ++KI+V F NKL LN+ N
Sbjct: 397 PHLQCMVLQTIRIDKIVSHQFMCF-VNLKTLKLVMSKISVFEDFAFIGLNKLKELNLHRN 455
Query: 109 EISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFS 168
+IS++ + TF GL EL + L N+I I F ++L+ L L + I+ FED F
Sbjct: 456 KISSIHRHTFSGLHELSVMILKNNRIDKIVSHQFMCFVNLKTLKLVMSKISVFEDFA-FI 514
Query: 169 SLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLA 228
L L+ L L +N+I + + S L H+ L L L EN I + SF TNL +L
Sbjct: 515 GLNKLKELNLHSNKISSIHRHTFSGL-HE-LRVLDLQENPIIYIEPKSFGH-FTNLSSLL 571
Query: 229 L 229
L
Sbjct: 572 L 572
Score = 158 (60.7 bits), Expect = 9.9e-08, P = 9.9e-08
Identities = 60/221 (27%), Positives = 96/221 (43%)
Query: 93 NFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLI 152
+F + L +L IS++++S L+ + F+ + L+ + L +I I F ++L+ L
Sbjct: 368 DFSHLPSLTSLFISHHDLSLLALNVFEKIPHLQCMVLQTIRIDKIVSHQFMCFVNLKTLK 427
Query: 153 LSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETV 212
L + I+ FED F L L+ L L N+I + + S L H+ L + L N I+ +
Sbjct: 428 LVMSKISVFEDFA-FIGLNKLKELNLHRNKISSIHRHTFSGL-HE-LSVMILKNNRIDKI 484
Query: 213 LDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSAL 272
+ + F NL TL L + L L +I S L L
Sbjct: 485 VSHQF-MCFVNLKTLKLVMSKISVFEDFAFIGLNKLKELNLHSNKISSIHRHTFSGLHEL 543
Query: 273 VNLDLSGNNFSNIDSVAF---KSLFSLKLVKINLIPNLDSI 310
LDL N I+ +F +L SL L +N PN+ I
Sbjct: 544 RVLDLQENPIIYIEPKSFGHFTNLSSLLLGDLNFPPNMSLI 584
Score = 155 (59.6 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 74/245 (30%), Positives = 115/245 (46%)
Query: 5 LTCIFLILALTKLNKAICPSRCQCFDQ----KLEASCTDAGLEVVPIQLNPEVQTIILRE 60
L C ++L +++K I + CF KL S + I LN +++ + L
Sbjct: 399 LQC--MVLQTIRIDK-IVSHQFMCFVNLKTLKLVMSKISVFEDFAFIGLN-KLKELNLHR 454
Query: 61 NRISNVH-YTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFK 119
N+IS++H +T S EL + L N+I+ + SH F L L + ++IS F
Sbjct: 455 NKISSIHRHTFSGLHELSVMILKNNRIDKIVSHQFMCFVNLKTLKLVMSKISVFEDFAFI 514
Query: 120 GLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEI--FSSLKSL---- 173
GL +LK L+L NKIS I++ F L +L L N I Y E F++L SL
Sbjct: 515 GLNKLKELNLHSNKISSIHRHTFSGLHELRVLDLQENPIIYIEPKSFGHFTNLSSLLLGD 574
Query: 174 -------RILKLDNNQILD-VPNNVLSNLPHQS-LHYLYLNENLIETVLDNSFPFTLTNL 224
++KL + I +P+N LSN+ S L ++L+ + + D S L +L
Sbjct: 575 LNFPPNMSLIKLHLSDIFGGIPSN-LSNVFISSGLRPMHLSM-FADNIGDLSVINQLVHL 632
Query: 225 HTLAL 229
TL L
Sbjct: 633 KTLKL 637
Score = 129 (50.5 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 61/245 (24%), Positives = 101/245 (41%)
Query: 57 ILRENRISNVHYTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKD 116
+LR N ++ SF ++ + V +I + F NKL LN+ N+IS++ +
Sbjct: 49 VLRSNDFQSL--CASFPQTVKKISDMVLRIIRIEDFAFIGLNKLKELNLHSNKISSIHQH 106
Query: 117 TFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILS-FN---NITYFED--SEIFSSL 170
TF GL EL+ LDL+ N + I +FR ++L L+L N N++ + S+IF +
Sbjct: 107 TFSGLHELRVLDLNENPLFHIEPESFRHLINLRTLLLGDLNFPPNMSLIKLHLSDIFREI 166
Query: 171 KSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALX 230
R L + + ++ N L S L E L + VL F L N+ +L
Sbjct: 167 P--RNLNIHHLRLSIFQNFNLLQYSIVSSSALKETEFLYDPVLILLHSFLLVNIKSLKHF 224
Query: 231 XXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAF 290
+ I L+ L L+L N S+I F
Sbjct: 225 SLSENLLNRLQNPNCSVFNISDISTGRILIIEEFAFIGLNKLKELNLHSNKISSIHQHTF 284
Query: 291 KSLFS 295
+++F+
Sbjct: 285 RTMFA 289
Score = 88 (36.0 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 31/114 (27%), Positives = 49/114 (42%)
Query: 336 LGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFVDNIQLETVII 395
+G K L+L N S+I F L L V I +D I F+ + L+T+ +
Sbjct: 442 IGLNKLKELNLHRNKISSIHRHTFSGLHELS-VMILKNNRIDKIVSHQFMCFVNLKTLKL 500
Query: 396 NENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPL 448
+ + F G LK ++L N +S + F L + LDL +NP+
Sbjct: 501 VMS-KISVFEDFAFIGLNKLKELNLHSNKISSIHRHTFSGLHELRVLDLQENPI 553
Score = 70 (29.7 bits), Expect = 7.3e-07, Sum P(2) = 7.3e-07
Identities = 30/107 (28%), Positives = 50/107 (46%)
Query: 344 LDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNLK 402
L L + S + AF L LK ++NL N + SI + F +L +I+ N +
Sbjct: 426 LKLVMSKISVFEDFAFIGLNKLK--ELNLHRNKISSIHRHTFSGLHELSVMILKNN-RID 482
Query: 403 QLPSKLFQGNTNLKSVSLKGNSLSHLEASHF-PLERISFLDLSDNPL 448
++ S F NLK++ L + +S E F L ++ L+L N +
Sbjct: 483 KIVSHQFMCFVNLKTLKLVMSKISVFEDFAFIGLNKLKELNLHSNKI 529
Score = 48 (22.0 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 26/113 (23%), Positives = 48/113 (42%)
Query: 336 LGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKL---VKINLIPNLDSIDQRAFVDNIQLET 392
+G K L+L N S+I F+++F+ L + I+ I + +V + E
Sbjct: 261 IGLNKLKELNLHSNKISSIHQHTFRTMFARVLFGSLGISAITLFILCPKTCYVCSWLAEK 320
Query: 393 VIIN---ENMNLKQ---LPSKLFQGNTNLKSVSLKGNSLSH-----LEASHFP 434
E +N+ +P + F G TN+ S+++ + L+ SH P
Sbjct: 321 CHFFSDVEGLNIASFYHIPPEAFNGLTNVTSLTITALDSKNCCEVALDFSHLP 373
>UNIPROTKB|F1RP61 [details] [associations]
symbol:SLITRK5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007409 "axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 GeneTree:ENSGT00680000099775
CTD:26050 OMA:HHRGPAL EMBL:AEMK01182519 EMBL:CT963117 EMBL:CU041325
RefSeq:XP_003357919.1 Ensembl:ENSSSCT00000010403 GeneID:100155909
KEGG:ssc:100155909 Uniprot:F1RP61
Length = 964
Score = 174 (66.3 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 63/196 (32%), Positives = 95/196 (48%)
Query: 22 CPSRCQC----FDQKLEASCTDAGLE-VVPIQLNP-EVQTIILRENRISNVHYTLSFYIE 75
CP+ C C D L +C + +E + +Q P + + L EN I+ V S ++E
Sbjct: 374 CPTACTCNLQISDLGLNVNCQERKIESIAELQPKPYNPKKMYLTENYIALVRR--SDFLE 431
Query: 76 LRSLDL---SVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYN 132
LDL N+I+++ F L L ++ N I LS + F GL+ L+ L L YN
Sbjct: 432 ATGLDLLHLGNNRISMIQDRAFGDLTNLRRLYLNGNRIERLSPELFYGLQSLQYLFLQYN 491
Query: 133 KISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVP-NNVL 191
I I F +L+LL L+ NN+ S +FS L LR L L +N +P + VL
Sbjct: 492 LIREIQPGTFDPVPNLQLLFLN-NNLLQTMPSGVFSGLTLLR-LNLRSNHFTSLPVSGVL 549
Query: 192 SNLPHQSLHYLYLNEN 207
L +SL + L++N
Sbjct: 550 DQL--KSLIQIDLHDN 563
Score = 144 (55.7 bits), Expect = 6.3e-13, Sum P(2) = 6.3e-13
Identities = 63/223 (28%), Positives = 107/223 (47%)
Query: 3 YFLTCIFLILALT-KLNKAICPSRCQCFDQK--LEASCTDAGLEVVPIQLNPE---VQTI 56
+ LT + L A T IC + C C ++ L SC + G+ + +++P + +
Sbjct: 28 FALTSLVLSCAETIDYYGEICDNACPCEEKDGILTVSCENRGI-ISLSEISPPRFPIYHL 86
Query: 57 ILRENRISNVHYTLSF--YIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALS 114
+L N ++ + Y F Y L L N I + + F L L+++ N++ L
Sbjct: 87 LLSGNLLNRL-YPNEFVNYTGASILHLGSNVIQDIETGAFHGLRGLRRLHLNNNKLELLR 145
Query: 115 KDTFKGLKELKTLDLSYNKISVINKTAFRDTLHL-ELLILSFNNITYFEDSEIFSSLKSL 173
DTF GL+ L+ L + YN ISVI AF LHL ++LIL+ N ++ ++ +F
Sbjct: 146 DDTFLGLESLEYLQVDYNYISVIEPNAF-GKLHLLQVLILNDNLLSSLPNN-LF------ 197
Query: 174 RILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNS 216
R + L + LD+ N L LP+ L L + ++E L+ +
Sbjct: 198 RFVPLTH---LDLRGNRLKLLPYMGL--LQHMDKVVELQLEEN 235
Score = 135 (52.6 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 54/201 (26%), Positives = 89/201 (44%)
Query: 93 NFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLI 152
N + + LN+N +I ++++ K K + L+ N I+++ ++ F + L+LL
Sbjct: 381 NLQISDLGLNVNCQERKIESIAELQPKPYNP-KKMYLTENYIALVRRSDFLEATGLDLLH 439
Query: 153 LSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETV 212
L N I+ +D F L +LR L L+ N+I + + L QSL YL+L NLI +
Sbjct: 440 LGNNRISMIQD-RAFGDLTNLRRLYLNGNRIERLSPELFYGL--QSLQYLFLQYNLIREI 496
Query: 213 LDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQ-LSKLSA 271
+F + NL L L L TL ++P L +L +
Sbjct: 497 QPGTFD-PVPNLQLLFLNNNLLQTMPSGVFSGL-TLLRLNLRSNHFTSLPVSGVLDQLKS 554
Query: 272 LVNLDLSGNNFS-NIDSVAFK 291
L+ +DL N + D V K
Sbjct: 555 LIQIDLHDNPWDCTCDVVGMK 575
Score = 113 (44.8 bits), Expect = 6.3e-13, Sum P(2) = 6.3e-13
Identities = 38/117 (32%), Positives = 61/117 (52%)
Query: 343 RLDLSGNNFSNIDSVAFKSLFSLK--LVKINLIPNLD--SIDQRAFVDNIQLETVIINEN 398
RL L+GN + F L SL+ ++ NLI + + D V N+QL + +N N
Sbjct: 461 RLYLNGNRIERLSPELFYGLQSLQYLFLQYNLIREIQPGTFDP---VPNLQL--LFLNNN 515
Query: 399 MNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHF--PLERISFLDLSDNPLHCDCN 453
+ L+ +PS +F G T L+ ++L+ N + L S L+ + +DL DNP C C+
Sbjct: 516 L-LQTMPSGVFSGLTLLR-LNLRSNHFTSLPVSGVLDQLKSLIQIDLHDNPWDCTCD 570
Score = 111 (44.1 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 40/126 (31%), Positives = 59/126 (46%)
Query: 100 LLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNIT 159
+ +L +S N ++ L + F L L N I I AF L L L+ N +
Sbjct: 83 IYHLLLSGNLLNRLYPNEFVNYTGASILHLGSNVIQDIETGAFHGLRGLRRLHLNNNKLE 142
Query: 160 YFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPF 219
D + F L+SL L++D N I + N L H L L LN+NL+ ++ +N F F
Sbjct: 143 LLRD-DTFLGLESLEYLQVDYNYISVIEPNAFGKL-HL-LQVLILNDNLLSSLPNNLFRF 199
Query: 220 T-LTNL 224
LT+L
Sbjct: 200 VPLTHL 205
Score = 61 (26.5 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 20/80 (25%), Positives = 39/80 (48%)
Query: 369 KINLIPNLDSIDQRA-FVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSH 427
K+ L N ++ +R+ F++ L+ + + N + + + F TNL+ + L GN +
Sbjct: 413 KMYLTENYIALVRRSDFLEATGLDLLHLGNN-RISMIQDRAFGDLTNLRRLYLNGNRIER 471
Query: 428 LEASHF-PLERISFLDLSDN 446
L F L+ + +L L N
Sbjct: 472 LSPELFYGLQSLQYLFLQYN 491
Score = 46 (21.3 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 40/172 (23%), Positives = 74/172 (43%)
Query: 261 IPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLK--LVKINLIPNL-----DSIDQX 313
I + L+ L L L+GN + F L SL+ ++ NLI + D +
Sbjct: 448 IQDRAFGDLTNLRRLYLNGNRIERLSPELFYGLQSLQYLFLQYNLIREIQPGTFDPVPNL 507
Query: 314 XXXXXXXXXXXXXXXXAFS-LTPLGTLKCDRLDLSGNNFSNIDSVAFKSLFSLK-LVKIN 371
FS LT L RL+L N+F+++ L LK L++I+
Sbjct: 508 QLLFLNNNLLQTMPSGVFSGLTLL------RLNLRSNHFTSLPVSGV--LDQLKSLIQID 559
Query: 372 LIPN-----LDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSV 418
L N D + + +V+ +++ V+++E + + P K + T+++S+
Sbjct: 560 LHDNPWDCTCDVVGMKLWVEQLKVG-VLVDEV--ICKAPKKFAE--TDMRSI 606
>UNIPROTKB|O94991 [details] [associations]
symbol:SLITRK5 "SLIT and NTRK-like protein 5" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0016021 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 EMBL:CH471085
GO:GO:0007409 InterPro:IPR000372 SMART:SM00013 HOGENOM:HOG000290667
HOVERGEN:HBG056407 eggNOG:NOG147171 EMBL:AB020725 EMBL:AK024251
EMBL:AL603883 EMBL:BC098106 EMBL:BC103509 IPI:IPI00016679
RefSeq:NP_056382.1 UniGene:Hs.591208 ProteinModelPortal:O94991
SMR:O94991 STRING:O94991 PhosphoSite:O94991 PaxDb:O94991
PRIDE:O94991 Ensembl:ENST00000325089 GeneID:26050 KEGG:hsa:26050
UCSC:uc001vln.3 CTD:26050 GeneCards:GC13P088324 HGNC:HGNC:20295
HPA:HPA013843 MIM:609680 neXtProt:NX_O94991 PharmGKB:PA134885524
InParanoid:O94991 OMA:HHRGPAL OrthoDB:EOG4X97GH PhylomeDB:O94991
GenomeRNAi:26050 NextBio:47908 ArrayExpress:O94991 Bgee:O94991
CleanEx:HS_SLITRK5 Genevestigator:O94991 GermOnline:ENSG00000165300
Uniprot:O94991
Length = 958
Score = 177 (67.4 bits), Expect = 8.4e-10, P = 8.4e-10
Identities = 63/196 (32%), Positives = 95/196 (48%)
Query: 22 CPSRCQC----FDQKLEASCTDAGLE-VVPIQLNP-EVQTIILRENRISNVHYTLSFYIE 75
CP+ C C D L +C + +E + +Q P + + L EN I+ V T ++E
Sbjct: 374 CPTACSCNLQISDLGLNVNCQERKIESIAELQPKPYNPKKMYLTENYIAVVRRT--DFLE 431
Query: 76 LRSLDL---SVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYN 132
LDL N+I+++ F L L ++ N I LS + F GL+ L+ L L YN
Sbjct: 432 ATGLDLLHLGNNRISMIQDRAFGDLTNLRRLYLNGNRIERLSPELFYGLQSLQYLFLQYN 491
Query: 133 KISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVP-NNVL 191
I I F +L+LL L+ NN+ S +FS L LR L L +N +P + VL
Sbjct: 492 LIREIQSGTFDPVPNLQLLFLN-NNLLQAMPSGVFSGLTLLR-LNLRSNHFTSLPVSGVL 549
Query: 192 SNLPHQSLHYLYLNEN 207
L +SL + L++N
Sbjct: 550 DQL--KSLIQIDLHDN 563
Score = 144 (55.7 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 57/203 (28%), Positives = 90/203 (44%)
Query: 91 SHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLEL 150
S N + + LN+N +I ++++ K K + L+ N I+V+ +T F + L+L
Sbjct: 379 SCNLQISDLGLNVNCQERKIESIAELQPKPYNP-KKMYLTENYIAVVRRTDFLEATGLDL 437
Query: 151 LILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIE 210
L L N I+ +D F L +LR L L+ N+I + + L QSL YL+L NLI
Sbjct: 438 LHLGNNRISMIQD-RAFGDLTNLRRLYLNGNRIERLSPELFYGL--QSLQYLFLQYNLIR 494
Query: 211 TVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQ-LSKL 269
+ +F + NL L L L TL ++P L +L
Sbjct: 495 EIQSGTFD-PVPNLQLLFLNNNLLQAMPSGVFSGL-TLLRLNLRSNHFTSLPVSGVLDQL 552
Query: 270 SALVNLDLSGNNFS-NIDSVAFK 291
+L+ +DL N + D V K
Sbjct: 553 KSLIQIDLHDNPWDCTCDIVGMK 575
Score = 141 (54.7 bits), Expect = 6.4e-13, Sum P(2) = 6.4e-13
Identities = 58/204 (28%), Positives = 100/204 (49%)
Query: 21 ICPSRCQCFDQK--LEASCTDAGLEVVPIQLNPE---VQTIILRENRISNVHYTLSF--Y 73
IC + C C ++ L SC + G+ + +++P + ++L N ++ + Y F Y
Sbjct: 47 ICDNACPCEEKDGILTVSCENRGI-ISLSEISPPRFPIYHLLLSGNLLNRL-YPNEFVNY 104
Query: 74 IELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNK 133
L L N I + + F L L+++ N++ L DTF GL+ L+ L + YN
Sbjct: 105 TGASILHLGSNVIQDIETGAFHGLRGLRRLHLNNNKLELLRDDTFLGLENLEYLQVDYNY 164
Query: 134 ISVINKTAFRDTLHL-ELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLS 192
ISVI AF LHL ++LIL+ N ++ ++ +F R + L + LD+ N L
Sbjct: 165 ISVIEPNAF-GKLHLLQVLILNDNLLSSLPNN-LF------RFVPLTH---LDLRGNRLK 213
Query: 193 NLPHQSLHYLYLNENLIETVLDNS 216
LP+ L L + ++E L+ +
Sbjct: 214 LLPYVGL--LQHMDKVVELQLEEN 235
Score = 116 (45.9 bits), Expect = 6.4e-13, Sum P(2) = 6.4e-13
Identities = 39/117 (33%), Positives = 61/117 (52%)
Query: 343 RLDLSGNNFSNIDSVAFKSLFSLK--LVKINLIPNLDS--IDQRAFVDNIQLETVIINEN 398
RL L+GN + F L SL+ ++ NLI + S D V N+QL + +N N
Sbjct: 461 RLYLNGNRIERLSPELFYGLQSLQYLFLQYNLIREIQSGTFDP---VPNLQL--LFLNNN 515
Query: 399 MNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHF--PLERISFLDLSDNPLHCDCN 453
+ L+ +PS +F G T L+ ++L+ N + L S L+ + +DL DNP C C+
Sbjct: 516 L-LQAMPSGVFSGLTLLR-LNLRSNHFTSLPVSGVLDQLKSLIQIDLHDNPWDCTCD 570
Score = 108 (43.1 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 39/126 (30%), Positives = 59/126 (46%)
Query: 100 LLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNIT 159
+ +L +S N ++ L + F L L N I I AF L L L+ N +
Sbjct: 83 IYHLLLSGNLLNRLYPNEFVNYTGASILHLGSNVIQDIETGAFHGLRGLRRLHLNNNKLE 142
Query: 160 YFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPF 219
D + F L++L L++D N I + N L H L L LN+NL+ ++ +N F F
Sbjct: 143 LLRD-DTFLGLENLEYLQVDYNYISVIEPNAFGKL-HL-LQVLILNDNLLSSLPNNLFRF 199
Query: 220 T-LTNL 224
LT+L
Sbjct: 200 VPLTHL 205
Score = 61 (26.5 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 20/80 (25%), Positives = 38/80 (47%)
Query: 369 KINLIPNLDSIDQRA-FVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSH 427
K+ L N ++ +R F++ L+ + + N + + + F TNL+ + L GN +
Sbjct: 413 KMYLTENYIAVVRRTDFLEATGLDLLHLGNN-RISMIQDRAFGDLTNLRRLYLNGNRIER 471
Query: 428 LEASHF-PLERISFLDLSDN 446
L F L+ + +L L N
Sbjct: 472 LSPELFYGLQSLQYLFLQYN 491
Score = 50 (22.7 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 37/166 (22%), Positives = 70/166 (42%)
Query: 261 IPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLK--LVKINLIPNLDSIDQXXXXXX 318
I + L+ L L L+GN + F L SL+ ++ NLI + S
Sbjct: 448 IQDRAFGDLTNLRRLYLNGNRIERLSPELFYGLQSLQYLFLQYNLIREIQSGTFDPVPNL 507
Query: 319 XXXXXXXXXXXAFSLTPLGTLKCDRLDLSGNNFSNIDSVAFKSLFSLK-LVKINLIPN-- 375
A L RL+L N+F+++ L LK L++I+L N
Sbjct: 508 QLLFLNNNLLQAMPSGVFSGLTLLRLNLRSNHFTSLPVSGV--LDQLKSLIQIDLHDNPW 565
Query: 376 ---LDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSV 418
D + + +V+ +++ V+++E + + P K + T+++S+
Sbjct: 566 DCTCDIVGMKLWVEQLKVG-VLVDEV--ICKAPKKFAE--TDMRSI 606
>UNIPROTKB|Q9WV82 [details] [associations]
symbol:TLR4 "Toll-like receptor 4" species:10029
"Cricetulus griseus" [GO:0001875 "lipopolysaccharide receptor
activity" evidence=ISS] [GO:0032497 "detection of
lipopolysaccharide" evidence=ISS] [GO:0046696 "lipopolysaccharide
receptor complex" evidence=ISS] InterPro:IPR000157
InterPro:IPR001611 InterPro:IPR017241 InterPro:IPR027168
Pfam:PF01582 PIRSF:PIRSF037595 PROSITE:PS50104 PROSITE:PS51450
SMART:SM00255 GO:GO:0006954 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0045087 GO:GO:0005622
InterPro:IPR025875 Pfam:PF12799 GO:GO:0004888 GO:GO:0046696
SUPFAM:SSF52200 GO:GO:0001875 GO:GO:0032497 HOVERGEN:HBG018823
PANTHER:PTHR24365:SF9 CTD:7099 EMBL:AF153676 RefSeq:NP_001233691.1
ProteinModelPortal:Q9WV82 SMR:Q9WV82 GeneID:100689329
Uniprot:Q9WV82
Length = 838
Score = 153 (58.9 bits), Expect = 6.4e-13, Sum P(2) = 6.4e-13
Identities = 64/228 (28%), Positives = 104/228 (45%)
Query: 8 IFLILALTKLN-KAICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNV 66
+ + L L+ L +++ P C D C D L +P + V+ + L N + +
Sbjct: 11 LMMALFLSSLRPESLDP--CVEVDSNTSYQCMDRNLNKIPDNIPSSVKHLDLSFNPLKTL 68
Query: 67 --HYTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKEL 124
H +F EL+ LDLS +I + ++ ++L L ++ N I LSK TF GL L
Sbjct: 69 GSHSFFNFP-ELKLLDLSRCEIETIEDKAYQGLHQLTTLILTGNPIQNLSKGTFSGLANL 127
Query: 125 KTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQIL 184
+ L K++ ++ + L+ L ++ N I F+ E FS+L +L L L NN I
Sbjct: 128 QNLVAVEIKLASLDSLPIGHLVTLKKLNVAHNLIHSFKLPEYFSNLTNLEHLDLSNNYIQ 187
Query: 185 DVPNNVLSNL---PHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLAL 229
+ L L P +L L L+ N I+ + +F LH L L
Sbjct: 188 TIYYTDLQTLRENPQLNLS-LELSLNPIDFIQPGAFQGI--RLHELTL 232
Score = 102 (41.0 bits), Expect = 6.4e-13, Sum P(2) = 6.4e-13
Identities = 42/128 (32%), Positives = 63/128 (49%)
Query: 331 FSLTPLGTLKCDRLDLSGNNFS-NIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFVDNIQ 389
F LT L TLK ++GN+F NI S F + +L + I+ L + F +
Sbjct: 466 FGLTSLNTLK-----MAGNSFKDNILSNVFTNTTNLTFLDISKC-QLQQVSWGVFDTLHR 519
Query: 390 LETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEAS-----HFPLERISFLDLS 444
LE + ++ N NL L LF L S+ S +H+E S HFP + ++FL+L+
Sbjct: 520 LELLNMSHN-NLLLLD--LFHYK-QLHSLKTLDCSFNHIETSKGIMQHFP-KSLAFLNLT 574
Query: 445 DNPLHCDC 452
+NP C C
Sbjct: 575 NNPFACIC 582
Score = 70 (29.7 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 49/188 (26%), Positives = 79/188 (42%)
Query: 269 LSALVNLDLSGNNFS-----NIDSVAFKSLFSLKLV---KINLIPNLDSIDQXXXXXXXX 320
L +L LDLSGN S + + +SL L L I++ N ++Q
Sbjct: 370 LPSLTFLDLSGNGMSFRGCCSYTDLGARSLKHLDLSFNGVISMSENFMGLEQLEYLDFQH 429
Query: 321 XXXXXXXXXAFSLTPLGTLKCDRLDLSGNNFSNID-SVAFKSLFSLKLVKINLIPNLDSI 379
+ L PL L LD+S N + ID + F L SL +K+ D+I
Sbjct: 430 STLKKATEFSMFL-PLEKLLY--LDISYTN-TKIDFNGIFFGLTSLNTLKMAGNSFKDNI 485
Query: 380 DQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERI 438
F + L + I++ L+Q+ +F L+ +++ N+L L+ H+ L +
Sbjct: 486 LSNVFTNTTNLTFLDISK-CQLQQVSWGVFDTLHRLELLNMSHNNLLLLDLFHYKQLHSL 544
Query: 439 SFLDLSDN 446
LD S N
Sbjct: 545 KTLDCSFN 552
Score = 49 (22.3 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 16/50 (32%), Positives = 26/50 (52%)
Query: 406 SKLFQGNTNLKSVSLKGNSLSHL-EASHF-PLERISFLDLSDNPLHCDCN 453
S+ F G L+ + + ++L E S F PLE++ +LD+S D N
Sbjct: 413 SENFMGLEQLEYLDFQHSTLKKATEFSMFLPLEKLLYLDISYTNTKIDFN 462
Score = 45 (20.9 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 10/38 (26%), Positives = 19/38 (50%)
Query: 411 GNTNLKSVSLKGNSLSHLEASHFPLERISFLDLSDNPL 448
G +LK + L N + + + LE++ +LD + L
Sbjct: 395 GARSLKHLDLSFNGVISMSENFMGLEQLEYLDFQHSTL 432
>MGI|MGI:2443718 [details] [associations]
symbol:Lrig2 "leucine-rich repeats and immunoglobulin-like
domains 2" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:2443718 GO:GO:0016021 GO:GO:0005886
GO:GO:0005737 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679
GeneTree:ENSGT00690000101816 HOGENOM:HOG000113380
HOVERGEN:HBG052353 CTD:9860 OMA:FPTNHER OrthoDB:EOG41NTKF
EMBL:AK173030 EMBL:BC094228 IPI:IPI00605095 IPI:IPI00649164
RefSeq:NP_001020238.1 UniGene:Mm.34855 ProteinModelPortal:Q52KR2
SMR:Q52KR2 PhosphoSite:Q52KR2 PRIDE:Q52KR2
Ensembl:ENSMUST00000046316 GeneID:269473 KEGG:mmu:269473
UCSC:uc008que.1 UCSC:uc012cvk.1 InParanoid:Q52KR2 NextBio:392862
Bgee:Q52KR2 Genevestigator:Q52KR2 GermOnline:ENSMUSG00000032913
Uniprot:Q52KR2
Length = 1054
Score = 206 (77.6 bits), Expect = 6.7e-13, P = 6.7e-13
Identities = 105/416 (25%), Positives = 177/416 (42%)
Query: 21 ICPSRCQCFDQKLEAS---CTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSFYIELR 77
+CP+ C C L+ S + L ++ ++ L NR+SN + TL L+
Sbjct: 41 LCPAPCACRLPLLDCSRRKLPAPSWRALSGPLPSDISSLDLSHNRLSNWNNTLESQT-LQ 99
Query: 78 SLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVI 137
+ ++ N++ + N L L++ +N I ++ + F+ L++LDLS N IS I
Sbjct: 100 EVKMNYNELTEIPYFGEPTPNITL-LSLVHNLIPEINAEAFELYSALESLDLSSNIISEI 158
Query: 138 NKTAFRDTLHLELLILSFNNITYFEDSEIFSSLK-SLRILKLDNNQILDVPNNVLSNLPH 196
++F + L+ L LS N I+ E + F +L SL ++KL+ N+I +P V LPH
Sbjct: 159 KTSSF-PRMSLKYLNLSNNRISTLE-AGCFDNLSDSLLVVKLNRNRISMIPPKVFK-LPH 215
Query: 197 QSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXX 256
L +L L N I+ V +F L +L +L + L +
Sbjct: 216 --LQFLELKRNRIKIVEGLTFQ-GLDSLRSLKMQRNGISKLKDGAFFGLNNMEELELEHN 272
Query: 257 XXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQXXX 315
+ L L L L +S N I A++ F +L +++L N L +D+
Sbjct: 273 NLTGVNKGWLYGLRMLQQLYMSQNAIEKISPDAWE--FCQRLSELDLSYNQLTRLDESAF 330
Query: 316 XXXXXXXXXXXXXXAFSLTPLGTLK----CDRLDLSGNNFSNIDSVAFKSLFSLK-LVKI 370
+ G + LDL N+ S A ++ LK L K+
Sbjct: 331 VGLSLLERLNLGDNRVTHIADGVFRFLSNLQTLDLRNNDISWAIEDASEAFSGLKSLTKL 390
Query: 371 NLIPN-LDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSL 425
L N + S+ Q+AF+ LE + +N N + + F T+LK + L +SL
Sbjct: 391 ILQGNRIKSVTQKAFIGLESLEYLDLNNNA-IMSIQENAFS-QTHLKGLVLNTSSL 444
Score = 173 (66.0 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 93/388 (23%), Positives = 164/388 (42%)
Query: 75 ELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKI 134
++ SLDLS N+++ ++ E Q L + ++YNE++ + + + L L +N I
Sbjct: 75 DISSLDLSHNRLSNW-NNTLESQT-LQEVKMNYNELTEIPYFG-EPTPNITLLSLVHNLI 131
Query: 135 SVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNL 194
IN AF LE L LS N I+ + S F + SL+ L L NN+I + NL
Sbjct: 132 PEINAEAFELYSALESLDLSSNIISEIKTSS-FPRM-SLKYLNLSNNRISTLEAGCFDNL 189
Query: 195 PHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXX 254
SL + LN N I + F L +L L L L +L
Sbjct: 190 S-DSLLVVKLNRNRISMIPPKVFK--LPHLQFLELKRNRIKIVEGLTFQGLDSLRSLKMQ 246
Query: 255 XXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQXX 314
+ L+ + L+L NN + ++ L+ L++++ L + ++I++
Sbjct: 247 RNGISKLKDGAFFGLNNMEELELEHNNLTGVNK---GWLYGLRMLQ-QLYMSQNAIEKIS 302
Query: 315 XXXXXXXXXXXXXXXAFS-LTPL------GTLKCDRLDLSGNNFSNIDSVAFKSLFSLKL 367
+++ LT L G +RL+L N ++I F+ L +L+
Sbjct: 303 PDAWEFCQRLSELDLSYNQLTRLDESAFVGLSLLERLNLGDNRVTHIADGVFRFLSNLQT 362
Query: 368 VKI--NLIPNLDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSL 425
+ + N I AF L +I+ N +K + K F G +L+ + L N++
Sbjct: 363 LDLRNNDISWAIEDASEAFSGLKSLTKLILQGN-RIKSVTQKAFIGLESLEYLDLNNNAI 421
Query: 426 SHLEASHFPLERISFLDLSDNPLHCDCN 453
++ + F + L L+ + L CDC+
Sbjct: 422 MSIQENAFSQTHLKGLVLNTSSLLCDCH 449
>UNIPROTKB|Q9NZU0 [details] [associations]
symbol:FLRT3 "Leucine-rich repeat transmembrane protein
FLRT3" species:9606 "Homo sapiens" [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=NAS] [GO:0030674 "protein binding, bridging" evidence=NAS]
[GO:0005578 "proteinaceous extracellular matrix" evidence=NAS]
[GO:0008150 "biological_process" evidence=ND] [GO:0005057 "receptor
signaling protein activity" evidence=NAS] InterPro:IPR001611
InterPro:IPR003961 PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060
GO:GO:0005887 GO:GO:0005578 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007155
GO:GO:0030674 EMBL:CH471133 GO:GO:0005057 InterPro:IPR000372
SMART:SM00013 HOVERGEN:HBG051629 KO:K16362 EMBL:AF169677
EMBL:AB040902 EMBL:AK027297 EMBL:AK027670 EMBL:AK027694
EMBL:AY358319 EMBL:AK074909 EMBL:AL132826 EMBL:BC020870
IPI:IPI00002320 RefSeq:NP_037413.1 RefSeq:NP_938205.1
UniGene:Hs.41296 ProteinModelPortal:Q9NZU0 SMR:Q9NZU0 STRING:Q9NZU0
PhosphoSite:Q9NZU0 DMDM:20138400 PaxDb:Q9NZU0 PeptideAtlas:Q9NZU0
PRIDE:Q9NZU0 DNASU:23767 Ensembl:ENST00000341420
Ensembl:ENST00000378053 GeneID:23767 KEGG:hsa:23767 UCSC:uc002wov.2
CTD:23767 GeneCards:GC20M014251 HGNC:HGNC:3762 HPA:CAB026166
MIM:604808 neXtProt:NX_Q9NZU0 PharmGKB:PA28179 InParanoid:Q9NZU0
OMA:SPYRVCM OrthoDB:EOG4NCMCB GenomeRNAi:23767 NextBio:46731
ArrayExpress:Q9NZU0 Bgee:Q9NZU0 CleanEx:HS_FLRT3
Genevestigator:Q9NZU0 GermOnline:ENSG00000125848 Uniprot:Q9NZU0
Length = 649
Score = 203 (76.5 bits), Expect = 7.8e-13, Sum P(2) = 7.8e-13
Identities = 81/294 (27%), Positives = 132/294 (44%)
Query: 8 IFLILALTKLNKAICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVH 67
+FL +A + CPS C+C D C D L +P + + T+ L+ N+I+N
Sbjct: 17 LFLQVAPLSVMAKSCPSVCRC-DAGF-IYCNDRFLTSIPTGIPEDATTLYLQNNQINNA- 73
Query: 68 YTLSFYIELRSLDLSVNKINVLGSHNFEYQNKL----LNLNISYNEISALSKDTFKGLKE 123
+L++L L V +I + + E+ L L++ N I ++ D+ +
Sbjct: 74 ---GIPSDLKNL-LKVERIYLYHNSLDEFPTNLPKYVKELHLQENNIRTITYDSLSKIPY 129
Query: 124 LKTLDLSYNKISVIN--KTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNN 181
L+ L L N +S ++ + AFRD+ +L LL LS N+++ + +++ L+LD+N
Sbjct: 130 LEELHLDDNSVSAVSIEEGAFRDSNYLRLLFLSRNHLSTIP----WGLPRTIEELRLDDN 185
Query: 182 QILDVPNNVLSNLPHQSLHYLYLNENLIETV-LDNSFPFTLTNLHTLALXXXXXXXXXXX 240
+I + + L L SL L L+ NL+ L + F L NL L+L
Sbjct: 186 RISTISSPSLQGLT--SLKRLVLDGNLLNNHGLGDKVFFNLVNLTELSLVRNSLTAAPVN 243
Query: 241 XXVT-LRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSL 293
T LR L+ +P S L L LD+S NN SN+ F L
Sbjct: 244 LPGTNLRKLYLQDNHINR---VPPNAFSYLRQLYRLDMSNNNLSNLPQGIFDDL 294
Score = 45 (20.9 bits), Expect = 7.8e-13, Sum P(2) = 7.8e-13
Identities = 9/37 (24%), Positives = 19/37 (51%)
Query: 504 SLTIVLN--NLKCSSPPDIKGLEVKAVPENSVHCESN 538
SL + +N L C +P ++G+ +K + C+ +
Sbjct: 322 SLPVKVNVRGLMCQAPEKVRGMAIKDLNAELFDCKDS 358
>MGI|MGI:2441805 [details] [associations]
symbol:Lgr6 "leucine-rich repeat-containing G
protein-coupled receptor 6" species:10090 "Mus musculus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0004930 "G-protein coupled
receptor activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016500 "protein-hormone
receptor activity" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000276 InterPro:IPR002131 Pfam:PF00001 PRINTS:PR00237
PRINTS:PR00373 PROSITE:PS00237 PROSITE:PS50262 PROSITE:PS51450
MGI:MGI:2441805 GO:GO:0016021 GO:GO:0005886 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372 SMART:SM00013
GO:GO:0016500 HSSP:P21809 GeneTree:ENSGT00650000092962
HOVERGEN:HBG031675 HOGENOM:HOG000231829 CTD:59352 KO:K08399
OrthoDB:EOG4SQWW8 EMBL:AK137380 EMBL:BC026896 EMBL:AY255562
IPI:IPI00321212 RefSeq:NP_001028581.1 UniGene:Mm.279594
ProteinModelPortal:Q3UVD5 SMR:Q3UVD5 IntAct:Q3UVD5
PhosphoSite:Q3UVD5 PRIDE:Q3UVD5 Ensembl:ENSMUST00000044828
GeneID:329252 KEGG:mmu:329252 UCSC:uc007csq.1 InParanoid:Q3UVD5
OMA:AYGKAPS NextBio:398648 Bgee:Q3UVD5 Genevestigator:Q3UVD5
Uniprot:Q3UVD5
Length = 967
Score = 200 (75.5 bits), Expect = 8.2e-13, Sum P(2) = 8.2e-13
Identities = 76/284 (26%), Positives = 120/284 (42%)
Query: 22 CPSRCQCFDQ--KLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSFYIE-LRS 78
CP+ C C + L A C++ GL VVP L+P + L N ++ + L ++ L
Sbjct: 35 CPAPCHCQEDGIMLSADCSELGLSVVPADLDPLTAYLDLSMNNLTELQPGLFHHLRFLEE 94
Query: 79 LDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVIN 138
L LS N ++ + F + L L + N++ + + L L++L L N IS++
Sbjct: 95 LRLSGNHLSHIPGQAFSGLHSLKILMLQSNQLRGIPAEALWELPSLQSLRLDANLISLVP 154
Query: 139 KTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQS 198
+ +F L L L N +T + ++L +L+ + L N I +P+ NL S
Sbjct: 155 ERSFEGLSSLRHLWLDDNALTEIPVRAL-NNLPALQAMTLALNHIRHIPDYAFQNLT--S 211
Query: 199 LHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXX 258
L L+L+ N I+ V +SF L NL TL L TL L
Sbjct: 212 LVVLHLHNNRIQHVGTHSFE-GLHNLETLDLNYNELQEFPLAIR-TLGRLQELGFHNNNI 269
Query: 259 XAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
AIP K L + N + AF+ L L + +N
Sbjct: 270 KAIPEKAFMGSPLLQTIHFYDNPIQFVGRSAFQYLSKLHTLSLN 313
Score = 141 (54.7 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 69/248 (27%), Positives = 95/248 (38%)
Query: 58 LRENRISNVHYTLSF--YIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSK 115
L NRI +V T SF L +LDL+ N++ +L L N I A+ +
Sbjct: 217 LHNNRIQHVG-THSFEGLHNLETLDLNYNELQEFPLA-IRTLGRLQELGFHNNNIKAIPE 274
Query: 116 DTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRI 175
F G L+T+ N I + ++AF+ L L S N T ++ SL I
Sbjct: 275 KAFMGSPLLQTIHFYDNPIQFVGRSAFQYLSKLHTL--SLNGATDIQEFPDLKGTTSLEI 332
Query: 176 LKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXX 235
L L I +P V LP L L L+ N IE + S L + L
Sbjct: 333 LTLTRAGIRLLPPGVCQQLPR--LRILELSHNQIEEL--PSL-HRCQKLEEIGLRHNRIK 387
Query: 236 XXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFS 295
L +L AI + S L +LV LDL+ N + + L
Sbjct: 388 EIGADTFSQLGSLQALDLSWNAIRAIHPEAFSTLRSLVKLDLTDNQLTTLPLAGLGGLMH 447
Query: 296 LKLVKINL 303
LKL K NL
Sbjct: 448 LKL-KGNL 454
Score = 53 (23.7 bits), Expect = 8.2e-13, Sum P(2) = 8.2e-13
Identities = 19/46 (41%), Positives = 26/46 (56%)
Query: 330 AFSLTPLGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN 375
A + + LG+L+ LDLS N I AF +L SL VK++L N
Sbjct: 391 ADTFSQLGSLQA--LDLSWNAIRAIHPEAFSTLRSL--VKLDLTDN 432
>FB|FBgn0032479 [details] [associations]
symbol:CG16974 species:7227 "Drosophila melanogaster"
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 Gene3D:2.60.40.10 InterPro:IPR013783 EMBL:AE014134
InterPro:IPR003598 SMART:SM00408 InterPro:IPR003591 SMART:SM00369
HSSP:P07359 GeneTree:ENSGT00700000105954 FlyBase:FBgn0032479
ChiTaRS:CG16974 EMBL:BT022757 RefSeq:NP_001246018.1
RefSeq:NP_609610.2 UniGene:Dm.10738 SMR:Q9VK28 STRING:Q9VK28
EnsemblMetazoa:FBtr0080489 EnsemblMetazoa:FBtr0305555 GeneID:34713
KEGG:dme:Dmel_CG16974 UCSC:CG16974-RA InParanoid:Q9VK28 OMA:HRIRENC
GenomeRNAi:34713 NextBio:789834 Uniprot:Q9VK28
Length = 1257
Score = 206 (77.6 bits), Expect = 8.4e-13, P = 8.4e-13
Identities = 74/260 (28%), Positives = 121/260 (46%)
Query: 52 EVQTIILRENRISNVHYTL-SFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEI 110
+++ + L NR+S + + L +L+ LDLS N++ + F +L L++ N++
Sbjct: 300 KLERLYLSGNRLSVLPFMLFQTAADLQVLDLSDNRLLSFPDNFFARNGQLRQLHLQRNQL 359
Query: 111 SALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSL 170
++ K + L+EL+ LDLS N +SVI++ AF HL L +S NN+T S IF SL
Sbjct: 360 KSIGKHSLYSLRELRQLDLSQNSLSVIDRKAFESLDHLLALNVSGNNLTLLS-SIIFQSL 418
Query: 171 KSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLD--NSFPFTLTN---LH 225
+LR L L NQ +P+ + +SL L ++E IE + + + +L + LH
Sbjct: 419 HALRQLDLSRNQFKQLPSGLFQR--QRSLVLLRIDETPIEQFSNWISRYDESLVDPQVLH 476
Query: 226 TLALXXXXXXXXXXXXXVTL----RTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNN 281
L TL + +PT Q+S LS L L + GN+
Sbjct: 477 RLRYLSVQQNRKLTYLPATLFANTPNIRELLLAENGLLQLPT-QISGLSRLQRLSVRGNS 535
Query: 282 FSNIDSVAFKSLFSLKLVKI 301
++ K L L + I
Sbjct: 536 LGSLPE-NIKELRQLHYLNI 554
Score = 199 (75.1 bits), Expect = 4.9e-12, P = 4.9e-12
Identities = 105/454 (23%), Positives = 182/454 (40%)
Query: 93 NFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLI 152
+FEY +L N++ N + L ++ +K L++S N++S + + L+ L
Sbjct: 201 SFEYMERL---NLAENRLECLHWAIPLAVRRVKVLEMSGNRLSNCSLLNLQYMKQLQELH 257
Query: 153 LSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETV 212
L + +TY L LR+L L N + ++P ++ L LYL+ N + +V
Sbjct: 258 LDRSELTYLPQ-RFLGELSELRMLNLSQNLLTELPRDIFVGA--LKLERLYLSGNRL-SV 313
Query: 213 LDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSAL 272
L T +L L L L +I L L L
Sbjct: 314 LPFMLFQTAADLQVLDLSDNRLLSFPDNFFARNGQLRQLHLQRNQLKSIGKHSLYSLREL 373
Query: 273 VNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQXXXXXXXXXXXXXXXXXAFS 332
LDLS N+ S ID AF+SL L + ++ NL + F
Sbjct: 374 RQLDLSQNSLSVIDRKAFESLDHLLALNVSG-NNLTLLSSIIFQSLHALRQLDLSRNQFK 432
Query: 333 LTPLG------TLKCDRLDLSG-NNFSNIDSVAFKSLFS------LKLVKINLIPNLDSI 379
P G +L R+D + FSN S +SL L+ + + L +
Sbjct: 433 QLPSGLFQRQRSLVLLRIDETPIEQFSNWISRYDESLVDPQVLHRLRYLSVQQNRKLTYL 492
Query: 380 DQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFPLERIS 439
F + + +++ EN L QLP+++ G + L+ +S++GNSL L + L ++
Sbjct: 493 PATLFANTPNIRELLLAEN-GLLQLPTQI-SGLSRLQRLSVRGNSLGSLPENIKELRQLH 550
Query: 440 FLDLSDNPLHCDCNXXXXXXXXXXXXKSTMETTTVAYEMTS-NTSISPGTTTEA--QRVD 496
+L++ N CDC+ S A ++ +T+ +P + E+ ++D
Sbjct: 551 YLNILGNEYQCDCSMYWLTAWLANTSTSLRHQMPQAQNHSNGSTNQTPLDSYESIDHQID 610
Query: 497 RIIKNNHS----LTIVLNNLKCSSPPDIKGLEVK 526
+ K + + VL+ L CS P ++ E K
Sbjct: 611 AL-KCQYGYRGDMLRVLSKLNCSVPTVVQFSEPK 643
Score = 162 (62.1 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 62/244 (25%), Positives = 111/244 (45%)
Query: 45 VPIQLNPEVQTIILRENRISNVHY-TLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNL 103
+P+ + V+ + + NR+SN L + +L+ L L +++ L ++L L
Sbjct: 222 IPLAVR-RVKVLEMSGNRLSNCSLLNLQYMKQLQELHLDRSELTYLPQRFLGELSELRML 280
Query: 104 NISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFED 163
N+S N ++ L +D F G +L+ L LS N++SV+ F+ L++L LS N + F D
Sbjct: 281 NLSQNLLTELPRDIFVGALKLERLYLSGNRLSVLPFMLFQTAADLQVLDLSDNRLLSFPD 340
Query: 164 SEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTN 223
+ F+ LR L L NQ+ + + L +L + L L L++N + +V+D +L +
Sbjct: 341 N-FFARNGQLRQLHLQRNQLKSIGKHSLYSL--RELRQLDLSQNSL-SVIDRKAFESLDH 396
Query: 224 LHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGN--- 280
L L + +L L +P+ + +LV L +
Sbjct: 397 LLALNVSGNNLTLLSSIIFQSLHALRQLDLSRNQFKQLPSGLFQRQRSLVLLRIDETPIE 456
Query: 281 NFSN 284
FSN
Sbjct: 457 QFSN 460
>ZFIN|ZDB-GENE-110408-27 [details] [associations]
symbol:rxfp2a "relaxin/insulin-like family peptide
receptor 2a" species:7955 "Danio rerio" [GO:0004930 "G-protein
coupled receptor activity" evidence=IEA] [GO:0007186 "G-protein
coupled receptor signaling pathway" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002172 InterPro:IPR008112 InterPro:IPR017452
Pfam:PF00001 Pfam:PF00057 PRINTS:PR00237 PRINTS:PR01739
PROSITE:PS50068 PROSITE:PS50262 PROSITE:PS51450 SMART:SM00192
ZFIN:ZDB-GENE-110408-27 GO:GO:0016021 GO:GO:0004930
InterPro:IPR003591 SMART:SM00369 Gene3D:4.10.400.10
InterPro:IPR023415 SUPFAM:SSF57424 PROSITE:PS01209
GeneTree:ENSGT00650000093266 EMBL:CR536612 IPI:IPI00485356
Ensembl:ENSDART00000149137 Bgee:F8W5N7 Uniprot:F8W5N7
Length = 750
Score = 203 (76.5 bits), Expect = 8.6e-13, P = 8.6e-13
Identities = 73/278 (26%), Positives = 120/278 (43%)
Query: 23 PSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNV-HYTLSFYIELRSLDL 81
P C+C + ++ C A L +P Q++ V ++ L+ N+I + YI+L+ L L
Sbjct: 106 PDVCRCINTEIH--CVHASLRSIP-QVSANVTSLSLKSNKIRTLPDEAFIKYIKLQRLFL 162
Query: 82 SVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTA 141
N IN + F KL L++S N IS LS F+ L++LK L L N I+ I
Sbjct: 163 QDNCINTVSIQAFSGLYKLQKLSLSQNSISLLSPGVFRDLRKLKWLILDDNPITTIAANT 222
Query: 142 FRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHY 201
F L L + ++ + + + + L L + N I + + L + H L
Sbjct: 223 FAGLSSLFFLSMVNTSLEALPSARLCAHMPFLSWLDFEGNSITTLGLSTLLDCEH--LTV 280
Query: 202 LYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAI 261
L L NLI+++ +N+F +L + L L LR+L I
Sbjct: 281 LSLRANLIKSLPENTFQ-SLRMMGDLDLSNNSIKELPVGIFKDLRSLQSLNLSQNPLDHI 339
Query: 262 PTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLV 299
Q + L L +L L G NI + F+ + +L +
Sbjct: 340 HPGQFNHLIQLQSLGLEGVEIPNIQTSMFRPMDNLSYI 377
Score = 176 (67.0 bits), Expect = 7.7e-10, P = 7.7e-10
Identities = 68/235 (28%), Positives = 102/235 (43%)
Query: 78 SLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVI 137
SL L NKI L F KL L + N I+ +S F GL +L+ L LS N IS++
Sbjct: 135 SLSLKSNKIRTLPDEAFIKYIKLQRLFLQDNCINTVSIQAFSGLYKLQKLSLSQNSISLL 194
Query: 138 NKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPN-NVLSNLPH 196
+ FRD L+ LIL N IT + F+ L SL L + N + +P+ + +++P
Sbjct: 195 SPGVFRDLRKLKWLILDDNPITTIA-ANTFAGLSSLFFLSMVNTSLEALPSARLCAHMPF 253
Query: 197 QSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXX 256
L +L N I T L S +L L+L +LR +
Sbjct: 254 --LSWLDFEGNSI-TTLGLSTLLDCEHLTVLSLRANLIKSLPENTFQSLRMMGDLDLSNN 310
Query: 257 XXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN--LIPNLDS 309
+P L +L +L+LS N +I F L L+ + + IPN+ +
Sbjct: 311 SIKELPVGIFKDLRSLQSLNLSQNPLDHIHPGQFNHLIQLQSLGLEGVEIPNIQT 365
>UNIPROTKB|F1LN63 [details] [associations]
symbol:Tlr3 "Protein Tlr3" species:10116 "Rattus
norvegicus" [GO:0002756 "MyD88-independent toll-like receptor
signaling pathway" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004888 "transmembrane signaling
receptor activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0007252 "I-kappaB phosphorylation" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0032722
"positive regulation of chemokine production" evidence=IEA]
[GO:0032728 "positive regulation of interferon-beta production"
evidence=IEA] [GO:0032735 "positive regulation of interleukin-12
production" evidence=IEA] [GO:0032755 "positive regulation of
interleukin-6 production" evidence=IEA] [GO:0032757 "positive
regulation of interleukin-8 production" evidence=IEA] [GO:0032760
"positive regulation of tumor necrosis factor production"
evidence=IEA] [GO:0034123 "positive regulation of toll-like
receptor signaling pathway" evidence=IEA] [GO:0034138 "toll-like
receptor 3 signaling pathway" evidence=IEA] [GO:0034346 "positive
regulation of type III interferon production" evidence=IEA]
[GO:0042346 "positive regulation of NF-kappaB import into nucleus"
evidence=IEA] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0045078 "positive regulation of
interferon-gamma biosynthetic process" evidence=IEA] [GO:0045080
"positive regulation of chemokine biosynthetic process"
evidence=IEA] [GO:0045087 "innate immune response" evidence=IEA]
[GO:0045356 "positive regulation of interferon-alpha biosynthetic
process" evidence=IEA] [GO:0045359 "positive regulation of
interferon-beta biosynthetic process" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0046330 "positive regulation of JNK
cascade" evidence=IEA] [GO:0050729 "positive regulation of
inflammatory response" evidence=IEA] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=IEA] [GO:0051607 "defense response to virus" evidence=IEA]
[GO:0071260 "cellular response to mechanical stimulus"
evidence=IEA] Pfam:PF00560 InterPro:IPR000157 InterPro:IPR001611
InterPro:IPR027173 Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450
SMART:SM00255 RGD:735171 GO:GO:0016021 GO:GO:0005737 GO:GO:0006952
GO:GO:0043123 GO:GO:0046330 GO:GO:0045944 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0032722
GO:GO:0032755 GO:GO:0009615 GO:GO:0051092 GO:GO:0032757
GO:GO:0071260 InterPro:IPR000372 SMART:SM00013 GO:GO:0032760
GO:GO:0043330 GO:GO:0032735 GO:GO:0042346 GO:GO:0045078
InterPro:IPR026906 Pfam:PF13306 GO:GO:0032728 GO:GO:0007252
GO:GO:0045080 SUPFAM:SSF52200 GO:GO:0045359
GeneTree:ENSGT00680000099674 GO:GO:0034123 PANTHER:PTHR24365:SF5
GO:GO:0045356 GO:GO:0034346 OMA:WINKTHT IPI:IPI00382156
Ensembl:ENSRNOT00000035781 ArrayExpress:F1LN63 Uniprot:F1LN63
Length = 905
Score = 204 (76.9 bits), Expect = 8.9e-13, P = 8.9e-13
Identities = 107/425 (25%), Positives = 175/425 (41%)
Query: 50 NPEVQTIILRENRI---SNVHYTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNIS 106
N +Q + L N++ SN ++ L SLDLS N + +G+ F + L L++
Sbjct: 248 NTSIQNLSLANNQLLATSNSTFSGLKQTNLTSLDLSYNSLRYVGNDAFSWLPHLKYLSLE 307
Query: 107 YNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEI 166
YN I +L+ +F+GL L+ L L K AF + + S NI F
Sbjct: 308 YNNIQSLTPHSFRGLSNLRYLSL---------KRAFTKQ---SVALASHPNIDDFS---- 351
Query: 167 FSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSF-PFTLTNLH 225
F LK L L +D+N I + +N + L L ++T+ + +F T + L
Sbjct: 352 FQWLKCLEHLNMDDNTIPGIKSNTFTGLVSLKYLSLSKTFTGLQTLTNETFVSLTHSPLL 411
Query: 226 TLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSK-LSALVNLDLSGNNFSN 284
TL L L L T Q + L + + LS N +
Sbjct: 412 TLNLTKNHISKIASGTFSWLGQLRILDLGLNEIEQELTGQEWRGLGNIFEIYLSYNKYLQ 471
Query: 285 IDSVAFKSLFSLKLVKINLIPNLDSIDQXXXXXXXXXXXXXXXXXAFSLTPL------GT 338
+ S +F + SL+ + + + L S+D ++ L G
Sbjct: 472 LTSKSFTLVPSLQRLMLRRVA-LKSVDISPSPFRPLYNLTILDLSNNNIANLNEDLLEGL 530
Query: 339 LKCDRLDLSGNNFSNI-------DSVAF-KSLFSLKLVKINLIPN-LDSIDQRAFVDNIQ 389
+ LD NN + + V F K L L + +NL N LD I + F + +
Sbjct: 531 ENLEILDFQHNNLARLWKHANPGGPVNFLKGLSHLHI--LNLESNGLDEIPVKVFKNLFE 588
Query: 390 LETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHF-P-LERISFLDLSDNP 447
L+++ + N NL L +F T+L+S++L+ N ++ +E S F P ++ LD+S NP
Sbjct: 589 LKSINLGLN-NLNTLLPSIFDDQTSLRSLNLQKNLITSVEKSVFGPAFHNLNSLDMSFNP 647
Query: 448 LHCDC 452
C C
Sbjct: 648 FDCTC 652
Score = 152 (58.6 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 100/440 (22%), Positives = 175/440 (39%)
Query: 21 ICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVH-YTLSFYIELRSL 79
+ S QC + A C+ L +P L + + L N++ + + Y +L L
Sbjct: 22 VVSSTNQCTVRYNVADCSHLKLTHIPDDLPSNITVLNLTHNQLRGLPPANFTRYSQLALL 81
Query: 80 DLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINK 139
D N I+ L + L LN+ +NE+S +S TF L L L N I I
Sbjct: 82 DAGFNSISKLEPELCQILPLLKVLNLQHNELSQISDQTFAFCTNLTELHLMSNSIRKIKS 141
Query: 140 TAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSL 199
F++ L L LS N ++ + L++L+ L L N+I + + L L + SL
Sbjct: 142 NPFKNQKSLIKLDLSRNGLSSTKLGTGVQ-LENLQELLLAKNKIFALRSEELDFLGNSSL 200
Query: 200 HYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXX---VTLRTLHXXXXXXX 256
L L+ N ++ F + L L L ++ ++
Sbjct: 201 QKLDLSSNPLKEFSPGCF-HAIGKLFVLLLNNAQLNLNLTEKLCWELSNTSIQNLSLANN 259
Query: 257 XXXAIPTKQLS--KLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQXX 314
A S K + L +LDLS N+ + + AF L LK + + N+ S+
Sbjct: 260 QLLATSNSTFSGLKQTNLTSLDLSYNSLRYVGNDAFSWLPHLKYLSLEY-NNIQSLTPHS 318
Query: 315 XXXXXXXXXXXXXXXAFSLTPLGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKI--NL 372
AF+ + L+ + NID +F+ L L+ + + N
Sbjct: 319 FRGLSNLRYLSLKR-AFTKQSVA--------LASH--PNIDDFSFQWLKCLEHLNMDDNT 367
Query: 373 IPNLDSIDQRAFVDNIQLETVIINENMN-LKQLPSKLFQGNTN--LKSVSLKGNSLSHLE 429
IP + S F + L+ + +++ L+ L ++ F T+ L +++L N +S +
Sbjct: 368 IPGIKS---NTFTGLVSLKYLSLSKTFTGLQTLTNETFVSLTHSPLLTLNLTKNHISKIA 424
Query: 430 ASHFP-LERISFLDLSDNPL 448
+ F L ++ LDL N +
Sbjct: 425 SGTFSWLGQLRILDLGLNEI 444
>UNIPROTKB|F1NR89 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0001656
"metanephros development" evidence=IEA] [GO:0001657 "ureteric bud
development" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001933 "negative regulation of
protein phosphorylation" evidence=IEA] [GO:0002042 "cell migration
involved in sprouting angiogenesis" evidence=IEA] [GO:0005095
"GTPase inhibitor activity" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0008201 "heparin binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0010593
"negative regulation of lamellipodium assembly" evidence=IEA]
[GO:0010596 "negative regulation of endothelial cell migration"
evidence=IEA] [GO:0010629 "negative regulation of gene expression"
evidence=IEA] [GO:0016337 "cell-cell adhesion" evidence=IEA]
[GO:0021836 "chemorepulsion involved in postnatal olfactory bulb
interneuron migration" evidence=IEA] [GO:0021972 "corticospinal
neuron axon guidance through spinal cord" evidence=IEA] [GO:0030308
"negative regulation of cell growth" evidence=IEA] [GO:0030837
"negative regulation of actin filament polymerization"
evidence=IEA] [GO:0031290 "retinal ganglion cell axon guidance"
evidence=IEA] [GO:0032870 "cellular response to hormone stimulus"
evidence=IEA] [GO:0033563 "dorsal/ventral axon guidance"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043116 "negative regulation of vascular
permeability" evidence=IEA] [GO:0043237 "laminin-1 binding"
evidence=IEA] [GO:0043394 "proteoglycan binding" evidence=IEA]
[GO:0045499 "chemorepellent activity" evidence=IEA] [GO:0048495
"Roundabout binding" evidence=IEA] [GO:0048754 "branching
morphogenesis of an epithelial tube" evidence=IEA] [GO:0048846
"axon extension involved in axon guidance" evidence=IEA]
[GO:0050929 "induction of negative chemotaxis" evidence=IEA]
[GO:0051058 "negative regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0051414 "response to cortisol
stimulus" evidence=IEA] [GO:0060763 "mammary duct terminal end bud
growth" evidence=IEA] [GO:0061364 "apoptotic process involved in
luteolysis" evidence=IEA] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IEA] [GO:0071504
"cellular response to heparin" evidence=IEA] [GO:0071672 "negative
regulation of smooth muscle cell chemotaxis" evidence=IEA]
[GO:0071676 "negative regulation of mononuclear cell migration"
evidence=IEA] [GO:0090024 "negative regulation of neutrophil
chemotaxis" evidence=IEA] [GO:0090260 "negative regulation of
retinal ganglion cell axon guidance" evidence=IEA] [GO:0090288
"negative regulation of cellular response to growth factor
stimulus" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005737
GO:GO:0008285 GO:GO:0005615 GO:GO:0009986 GO:GO:0030308
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0008201 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0043065 GO:GO:0071504 GO:GO:0005095
GO:GO:0016337 PROSITE:PS01186 GO:GO:0032870 GO:GO:0030837
GO:GO:0010629 InterPro:IPR003645 InterPro:IPR001791 Pfam:PF00054
SMART:SM00274 SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025
GO:GO:0071672 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0010596 GO:GO:0001933 GO:GO:0071676 InterPro:IPR006207
PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041 GO:GO:0070100
GO:GO:0090288 GO:GO:0045499 Pfam:PF01463 GO:GO:0010593
GO:GO:0051414 GeneTree:ENSGT00700000104083 GO:GO:0050929
GO:GO:0090024 GO:GO:0051058 EMBL:AADN02015249 EMBL:AADN02015250
EMBL:AADN02015251 EMBL:AADN02015252 EMBL:AADN02015253
EMBL:AADN02015254 EMBL:AADN02015255 EMBL:AADN02015256
EMBL:AADN02015257 EMBL:AADN02015258 EMBL:AADN02015259
EMBL:AADN02015260 EMBL:AADN02015261 EMBL:AADN02015262
EMBL:AADN02015263 EMBL:AADN02015264 EMBL:AADN02015265
EMBL:AADN02015266 EMBL:AADN02015267 EMBL:AADN02015268
EMBL:AADN02015269 EMBL:AADN02015270 EMBL:AADN02015271
IPI:IPI00821752 Ensembl:ENSGALT00000037322 ArrayExpress:F1NR89
Uniprot:F1NR89
Length = 870
Score = 205 (77.2 bits), Expect = 9.3e-13, Sum P(2) = 9.3e-13
Identities = 48/135 (35%), Positives = 72/135 (53%)
Query: 22 CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSFYIELRSLDL 81
CP+ C C D + C++ GL+ +P + +V + L N+ + V LS Y L +DL
Sbjct: 68 CPAECTCLDTVVR--CSNKGLKALPKGIPKDVTELYLDGNQFTLVPKELSNYKHLTLIDL 125
Query: 82 SVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTA 141
S N+I+ L + +F +LL L +SYN + + TF GLK L+ L L N ISV+ + A
Sbjct: 126 SNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPARTFDGLKSLRLLSLHGNDISVVPEGA 185
Query: 142 FRDTLHLELLILSFN 156
F D L L + N
Sbjct: 186 FNDLSALSHLAIGAN 200
Score = 141 (54.7 bits), Expect = 8.2e-06, Sum P(2) = 8.2e-06
Identities = 42/123 (34%), Positives = 67/123 (54%)
Query: 335 PLGTLK-CDRLDLSGNNFSNIDSVAFKSLFSLK-LVKINLIPN-LDSIDQRAFVDNIQLE 391
P G K L L GN F+ + K L + K L I+L N + ++ ++F + QL
Sbjct: 90 PKGIPKDVTELYLDGNQFTLVP----KELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLL 145
Query: 392 TVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHF-PLERISFLDLSDNPLHC 450
T+I++ N L+ +P++ F G +L+ +SL GN +S + F L +S L + NPL+C
Sbjct: 146 TLILSYN-RLRCIPARTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 204
Query: 451 DCN 453
DCN
Sbjct: 205 DCN 207
Score = 127 (49.8 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 34/105 (32%), Positives = 54/105 (51%)
Query: 103 LNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFE 162
L + N+ + + K+ K L +DLS N+IS ++ +F + L LILS+N +
Sbjct: 100 LYLDGNQFTLVPKE-LSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIP 158
Query: 163 DSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNEN 207
+ F LKSLR+L L N I VP ++L +L +L + N
Sbjct: 159 -ARTFDGLKSLRLLSLHGNDISVVPEGAFNDL--SALSHLAIGAN 200
Score = 46 (21.3 bits), Expect = 9.3e-13, Sum P(2) = 9.3e-13
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 496 DRIIKNNHSLTIVLNNLKCSSPPDIKG 522
D +NN + +NN C PP+ G
Sbjct: 345 DNDCENNSTCVDGINNYTCLCPPEYTG 371
Score = 37 (18.1 bits), Expect = 7.9e-12, Sum P(2) = 7.9e-12
Identities = 9/28 (32%), Positives = 10/28 (35%)
Query: 496 DRIIKNNHSLTIVLNNLKCSSPPDIKGL 523
D KN T +N C P GL
Sbjct: 423 DNKCKNGAQCTDAVNGYTCICPEGYSGL 450
>ZFIN|ZDB-GENE-080219-38 [details] [associations]
symbol:zgc:172282 "zgc:172282" species:7955 "Danio
rerio" [GO:0016020 "membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
InterPro:IPR001611 InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450
SMART:SM00060 ZFIN:ZDB-GENE-080219-38 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
HOVERGEN:HBG052352 EMBL:BC171440 IPI:IPI00882605 UniGene:Dr.85826
ProteinModelPortal:B7ZV32 Uniprot:B7ZV32
Length = 687
Score = 199 (75.1 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 66/210 (31%), Positives = 101/210 (48%)
Query: 8 IF-LILALTKLNKAICPSRCQC--FDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRIS 64
IF L+L + +CP RC C L C GL VP ++ + L EN I+
Sbjct: 5 IFSLLLLAVSASGQLCPKRCMCQNLSPSLAILCAKTGLLFVPTVIDRRTVELRLTENFIT 64
Query: 65 NV-HYTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKE 123
V + L L LS N I+ + + F +L L++ N +S ++ D F+GL
Sbjct: 65 AVKRRDFANMTSLLHLTLSRNTISQIMPYTFADLKRLRALHLDSNRLSVITDDHFRGLTN 124
Query: 124 LKTLDLSYNKISVINKTAFRDTLH-LELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQ 182
L+ L L+ N++ I+ AF D L LE L LS+NN+ I L ++ L +D+N
Sbjct: 125 LRHLILANNQLHNISPHAFDDFLGTLEDLDLSYNNLVDIPWDTI-GRLTNVNTLNMDHNL 183
Query: 183 ILDVPNNVLSNLPHQSLHYLYLNENLIETV 212
I VP + SNL H+ L L + N ++ +
Sbjct: 184 IDHVPLGIFSNL-HK-LARLDMTSNKLKKI 211
Score = 162 (62.1 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 51/155 (32%), Positives = 77/155 (49%)
Query: 74 IELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNK 133
+ELR L+ N I + +F LL+L +S N IS + TF LK L+ L L N+
Sbjct: 54 VELR---LTENFITAVKRRDFANMTSLLHLTLSRNTISQIMPYTFADLKRLRALHLDSNR 110
Query: 134 ISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSN 193
+SVI FR +L LIL+ N + L +L L L N ++D+P + +
Sbjct: 111 LSVITDDHFRGLTNLRHLILANNQLHNISPHAFDDFLGTLEDLDLSYNNLVDIPWDTIGR 170
Query: 194 LPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLA 228
L + ++ L ++ NLI+ V F +NLH LA
Sbjct: 171 LTN--VNTLNMDHNLIDHVPLGIF----SNLHKLA 199
Score = 118 (46.6 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 39/138 (28%), Positives = 67/138 (48%)
Query: 56 IILRENRISNVH-YTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALS 114
+ L N IS + YT + LR+L L N+++V+ +F L +L ++ N++ +S
Sbjct: 80 LTLSRNTISQIMPYTFADLKRLRALHLDSNRLSVITDDHFRGLTNLRHLILANNQLHNIS 139
Query: 115 KDTFKG-LKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSL 173
F L L+ LDLSYN + I ++ L + N I + IFS+L L
Sbjct: 140 PHAFDDFLGTLEDLDLSYNNLVDIPWDTIGRLTNVNTLNMDHNLIDHVPLG-IFSNLHKL 198
Query: 174 RILKLDNNQILDVPNNVL 191
L + +N++ +P + L
Sbjct: 199 ARLDMTSNKLKKIPPDPL 216
Score = 49 (22.3 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 514 CSSPPDIKGLEVKAVPENSVHCE 536
C+SPPD+ +PE C+
Sbjct: 264 CASPPDLTAKYFWTIPEEEFICD 286
>FB|FBgn0000313 [details] [associations]
symbol:chp "chaoptic" species:7227 "Drosophila melanogaster"
[GO:0005886 "plasma membrane" evidence=NAS;IDA] [GO:0007156
"homophilic cell adhesion" evidence=NAS;IDA] [GO:0042051 "compound
eye photoreceptor development" evidence=NAS] [GO:0042052
"rhabdomere development" evidence=IGI] [GO:0016028 "rhabdomere"
evidence=IDA] Pfam:PF00560 InterPro:IPR000225 InterPro:IPR001611
PROSITE:PS51450 EMBL:AE014297 GO:GO:0005886 GO:GO:0007601
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0050896
GO:GO:0007156 GO:GO:0016028 HOGENOM:HOG000265621 GO:GO:0042052
GeneTree:ENSGT00700000104056 EMBL:M19017 EMBL:M19008 EMBL:M19009
EMBL:M19010 EMBL:M19011 EMBL:M19012 EMBL:M19013 EMBL:M19014
EMBL:M19016 EMBL:K03274 PIR:A29944 RefSeq:NP_524605.1
UniGene:Dm.21698 ProteinModelPortal:P12024 SMR:P12024 STRING:P12024
PaxDb:P12024 PRIDE:P12024 EnsemblMetazoa:FBtr0085778
EnsemblMetazoa:FBtr0330099 GeneID:43690 KEGG:dme:Dmel_CG1744
CTD:64152 FlyBase:FBgn0000313 InParanoid:P12024 OMA:LSHNDEL
OrthoDB:EOG4VQ844 PhylomeDB:P12024 ChiTaRS:CHP GenomeRNAi:43690
NextBio:835267 Bgee:P12024 GermOnline:CG1744 Uniprot:P12024
Length = 1315
Score = 190 (71.9 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 88/372 (23%), Positives = 160/372 (43%)
Query: 72 FYIELRSLDLSVNKINVLGSHNFE-YQNKLLNLNISYNEISALSKDTFKGLKELKTLDLS 130
++ ++ LDLS N I+++ F + L +L++ YN + ++D F + L+ LDLS
Sbjct: 705 YHSNIKILDLSHNNISIIHPGYFRPAEISLTHLHLGYNSLMNTTRDVFGNMPHLQWLDLS 764
Query: 131 YNKISVINKTAFRDTLHLELLILSFNNITYFED--SEIFSSLKSLRILKLDNNQILDVPN 188
YN I ++ AF++T L+L+ N Y D +IF ++ LRI+ +N + +P+
Sbjct: 765 YNWIHELDFDAFKNTKQLQLVFFGHN---YLSDIPQDIFKPVQGLRIVDFSHNHLRGLPD 821
Query: 189 NVLSNLPHQSL---HYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTL 245
N+ N + L H + L + + L + TL LH L+
Sbjct: 822 NLFYNGGMEKLDVSHNMMLK--IPSSSLSSLAALTLCELH-LSNNFISTIHSMDLSN-KF 877
Query: 246 RTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIP 305
R+L I + + L LDLS N + +F L + L+K+ L
Sbjct: 878 RSLRYLDISYNYLLRIDDAVFATMPKLAVLDLSHNRDLKVMDKSFMGLEN-SLIKLGLEN 936
Query: 306 -NLDSIDQXXXXXXXXXXXXXXXXXAFSLTPLGTLKCDR-LDLSGNNFSNIDSVAFKSLF 363
+L ++ + + + R LDLS N+ +N+ + ++L
Sbjct: 937 ISLSTVPEIRLKYLREFRLGYNELPSIPQELAHNMSNLRMLDLSNNDLTNVPLMT-QALP 995
Query: 364 SLKLVKINLIPNLDSIDQRAFVD-NIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKG 422
L+ + ++ P + S++ +F N LE + I+ N L +L+S+ L
Sbjct: 996 HLRRLMLSGNP-ITSLNNNSFDGVNEDLEMLDIS-NFRLHYFEYGCLDSLPHLRSLKL-- 1051
Query: 423 NSLSHLEASHFP 434
+ SHLE + P
Sbjct: 1052 TAYSHLEHFNIP 1063
Score = 168 (64.2 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 64/216 (29%), Positives = 101/216 (46%)
Query: 12 LALTKL-NKAICPSRCQCFDQKLE-ASCTDAGLEVVPIQLNPEVQ---TIILRENRISNV 66
L++++L + ++ P + F +LE T A L + V+ + EN IS++
Sbjct: 432 LSISRLGSSSVGPEDFKDFGVELEDLQITRASLSGIQSHAFKHVRGLKRLDFSENGISSI 491
Query: 67 HYTLSFYI--ELRSLDLSVNKI-NVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKE 123
I L SL +S + L + + L L+ S N IS++S +F LK
Sbjct: 492 ENDAFHEIGHSLISLKMSHGYSGSALPAEPLRHLTSLQELDFSNNHISSMSDTSFHFLKN 551
Query: 124 LKTLDLSYNKISVINKTAFRDTLH--LELLILSFNNITYFEDSEIFSSLKSLRILKLDNN 181
L+ L+L N+I + K F+ +H LE + L FN++T F L++LR L LD+N
Sbjct: 552 LRLLELHDNRIEQVLKGTFQGDIHSKLEEISLRFNHLTSISQHTFFD-LEALRKLHLDDN 610
Query: 182 QILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSF 217
+I + NL L YL L N I + D SF
Sbjct: 611 KIDKIERRAFMNL--DELEYLSLRGNKINNLADESF 644
Score = 166 (63.5 bits), Expect = 9.4e-08, Sum P(2) = 9.4e-08
Identities = 100/414 (24%), Positives = 169/414 (40%)
Query: 58 LRENRISNVHYTLSFYI-ELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKD 116
L +N+I + + EL L L NKIN L +F+ KL L++++N++ + D
Sbjct: 607 LDDNKIDKIERRAFMNLDELEYLSLRGNKINNLADESFQNLPKLEILDMAFNQLPNFNFD 666
Query: 117 TFKGLKELKTLDL--SYNKISVI--NKTAFRDTLH-------LELLILSFNNIT-----Y 160
F + L L++ S+N+I + N + H +++L LS NNI+ Y
Sbjct: 667 YFDQVGTLSNLNVNVSHNQIRQLMYNSSWSGRNEHGGMYHSNIKILDLSHNNISIIHPGY 726
Query: 161 FEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFT 220
F +EI SL L L N +++ +V N+PH L +L L+ N I + ++F T
Sbjct: 727 FRPAEI-----SLTHLHLGYNSLMNTTRDVFGNMPH--LQWLDLSYNWIHELDFDAFKNT 779
Query: 221 LTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGN 280
L + ++ L +P L + LD+S N
Sbjct: 780 -KQLQLVFFGHNYLSDIPQDIFKPVQGLRIVDFSHNHLRGLPDN-LFYNGGMEKLDVSHN 837
Query: 281 NFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQXXXXXXXXXXXXXXXXXAFSL----TP 335
I S + SL +L L +++L N + +I + L
Sbjct: 838 MMLKIPSSSLSSLAALTLCELHLSNNFISTIHSMDLSNKFRSLRYLDISYNYLLRIDDAV 897
Query: 336 LGTL-KCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFVDNIQLETVI 394
T+ K LDLS N + +F L + L+K+ L N+ S+ + L
Sbjct: 898 FATMPKLAVLDLSHNRDLKVMDKSFMGLEN-SLIKLGL-ENI-SLSTVPEIRLKYLREFR 954
Query: 395 INENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFPLERISFLDLSDNPL 448
+ N L +P +L +NL+ + L N L+++ L + L LS NP+
Sbjct: 955 LGYN-ELPSIPQELAHNMSNLRMLDLSNNDLTNVPLMTQALPHLRRLMLSGNPI 1007
Score = 163 (62.4 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 94/387 (24%), Positives = 158/387 (40%)
Query: 56 IILRENRISNV-HYTLSFYIELRSLDLSVNKINVLGSHNFE-YQNKLLNLNISYNEISAL 113
+IL +N + + +L +LR LDL N I + +F ++ L L + N IS L
Sbjct: 132 LILPQNDLVEIPSKSLRHLQKLRHLDLGYNHITHIQHDSFRGLEDSLQTLILRENCISQL 191
Query: 114 SKDTFKGLKELKTLDLSYNKISVINKTAFRDTL-HLELLILSFNNITYFEDSEIFSSLKS 172
+F GL L+TLDLS N + I+ F D + L L+L+ +NI + LKS
Sbjct: 192 MSHSFSGLLILETLDLSGNNLFEIDPNVFVDGMPRLTRLLLT-DNILSEIPYDALGPLKS 250
Query: 173 LRILKLDNNQILDVPNNVLSNLPHQS---LHYLYLNENLIETVLDNSFP-FTLTNLHTLA 228
LR L + +N I + N + + L L+L N IE + NSF F N
Sbjct: 251 LRTLDISHNVIWSLSGNETYEIKASTKLNLDNLHLEYNHIEVLPPNSFKYFDTVNRTFFD 310
Query: 229 LXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSV 288
+R ++ + L +++L LDLSGNN + +
Sbjct: 311 GNPIHTLREDAFKPARIREIYMRYCGLTNISPVAFDSL--VNSLQILDLSGNNLTKLHHK 368
Query: 289 AFKSLFSLKLVKINLIPNLDSIDQXXXXXXXXXXXXXXXXXAFSLTPLGTLKCDRLDLSG 348
F + L+++ + N I + ++L L L DR D +
Sbjct: 369 LFNNFDVLRVISMR--DNKIKIQKPTETFNAVH---------YTLLKLD-LSGDRNDPT- 415
Query: 349 NNFSNIDSVA-FKSLFSLKLVKINLIPNLDSIDQRAFVD-NIQLETVIINENMNLKQLPS 406
N + ++ +++ SL + ++ S+ F D ++LE + I +L + S
Sbjct: 416 -NLQTLRNMTRMRNMRSLSISRLGS----SSVGPEDFKDFGVELEDLQITR-ASLSGIQS 469
Query: 407 KLFQGNTNLKSVSLKGNSLSHLEASHF 433
F+ LK + N +S +E F
Sbjct: 470 HAFKHVRGLKRLDFSENGISSIENDAF 496
Score = 150 (57.9 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 53/160 (33%), Positives = 83/160 (51%)
Query: 76 LRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKE-LKTLDLSYNKI 134
L L L N + + S + + KL +L++ YN I+ + D+F+GL++ L+TL L N I
Sbjct: 129 LWELILPQNDLVEIPSKSLRHLQKLRHLDLGYNHITHIQHDSFRGLEDSLQTLILRENCI 188
Query: 135 SVINKTAFRDTLHLELLILSFNNITYFE-DSEIF-SSLKSLRILKLDNNQILDVPNNVLS 192
S + +F L LE L LS NN+ FE D +F + L L L +N + ++P + L
Sbjct: 189 SQLMSHSFSGLLILETLDLSGNNL--FEIDPNVFVDGMPRLTRLLLTDNILSEIPYDALG 246
Query: 193 NLPHQSLHYLYLNENLIETVLDN-------SFPFTLTNLH 225
P +SL L ++ N+I ++ N S L NLH
Sbjct: 247 --PLKSLRTLDISHNVIWSLSGNETYEIKASTKLNLDNLH 284
Score = 132 (51.5 bits), Expect = 7.7e-09, Sum P(2) = 7.7e-09
Identities = 48/183 (26%), Positives = 85/183 (46%)
Query: 58 LRENRISNV---HYTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALS 114
L +NRI V + + +L + L N + + H F L L++ N+I +
Sbjct: 557 LHDNRIEQVLKGTFQGDIHSKLEEISLRFNHLTSISQHTFFDLEALRKLHLDDNKIDKIE 616
Query: 115 KDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLR 174
+ F L EL+ L L NKI+ + +F++ LE+L ++FN + F + + F + +L
Sbjct: 617 RRAFMNLDELEYLSLRGNKINNLADESFQNLPKLEILDMAFNQLPNF-NFDYFDQVGTLS 675
Query: 175 ILKLD--NNQILDVP-------NNVLSNLPHQSLHYLYLNENLIETVLDNSF-P--FTLT 222
L ++ +NQI + N + H ++ L L+ N I + F P +LT
Sbjct: 676 NLNVNVSHNQIRQLMYNSSWSGRNEHGGMYHSNIKILDLSHNNISIIHPGYFRPAEISLT 735
Query: 223 NLH 225
+LH
Sbjct: 736 HLH 738
Score = 121 (47.7 bits), Expect = 2.7e-06, Sum P(3) = 2.7e-06
Identities = 52/212 (24%), Positives = 92/212 (43%)
Query: 26 CQCFDQKLEAS---CTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSFYIE---LRSL 79
C C + C + +P +N ++ EN + + ++++ + L
Sbjct: 50 CTCSKSSTDLGIVHCKNVPFPALPRMVNQSKVFMLHMEN--TGLREIEPYFLQSTGMYRL 107
Query: 80 DLSVNKINVLGSHNFE-YQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVIN 138
+S N + + F + L L + N++ + + + L++L+ LDL YN I+ I
Sbjct: 108 KISGNHLTEIPDDAFTGLERSLWELILPQNDLVEIPSKSLRHLQKLRHLDLGYNHITHIQ 167
Query: 139 KTAFRDTLH-LELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDV-PNNVLSNLPH 196
+FR L+ LIL N I+ S FS L L L L N + ++ PN + +P
Sbjct: 168 HDSFRGLEDSLQTLILRENCISQLM-SHSFSGLLILETLDLSGNNLFEIDPNVFVDGMPR 226
Query: 197 QSLHYLYLNENLIETV-LDNSFPFTLTNLHTL 227
L L L +N++ + D P L +L TL
Sbjct: 227 --LTRLLLTDNILSEIPYDALGP--LKSLRTL 254
Score = 89 (36.4 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 61/274 (22%), Positives = 108/274 (39%)
Query: 261 IPTKQLSKLSALV--NLDLSGNNFSNIDSVAFKSLF-SLKLVKI--NLIPNLD-SIDQXX 314
IP+ LS L+AL L LS N S I S+ + F SL+ + I N + +D ++
Sbjct: 842 IPSSSLSSLAALTLCELHLSNNFISTIHSMDLSNKFRSLRYLDISYNYLLRIDDAVFATM 901
Query: 315 XXXXXXXXXXXXXXXAFSLTPLGTLKC-DRLDLSGNNFSNIDSVAFKSLFSLKLVKINLI 373
+ +G +L L + S + + K L +L N +
Sbjct: 902 PKLAVLDLSHNRDLKVMDKSFMGLENSLIKLGLENISLSTVPEIRLKYLREFRL-GYNEL 960
Query: 374 PNLDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHF 433
P SI Q + L + ++ N +L +P + Q +L+ + L GN ++ L + F
Sbjct: 961 P---SIPQELAHNMSNLRMLDLSNN-DLTNVPL-MTQALPHLRRLMLSGNPITSLNNNSF 1015
Query: 434 P--LERISFLDLSDNPLHC---DC-NXXXXXXXXXXXXKSTMETTTVAYEMTSNTSISPG 487
E + LD+S+ LH C + S +E + + + + +I
Sbjct: 1016 DGVNEDLEMLDISNFRLHYFEYGCLDSLPHLRSLKLTAYSHLEHFNIPHLLRHHYNIRQL 1075
Query: 488 TTTEAQRVDRIIKNNHSLTIVLNNLKCSSPPDIK 521
Q RI+K T + L+ +P D++
Sbjct: 1076 WIEAPQPFTRIVKKGSGPTQEMQTLQLGNPTDLQ 1109
Score = 77 (32.2 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 27/111 (24%), Positives = 57/111 (51%)
Query: 339 LKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRAFVD-NIQLETVIIN 396
++ + L ++ + S I S AFK + LK +++ N + SI+ AF + L ++ ++
Sbjct: 452 VELEDLQITRASLSGIQSHAFKHVRGLK--RLDFSENGISSIENDAFHEIGHSLISLKMS 509
Query: 397 ENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDN 446
+ LP++ + T+L+ + N +S + + F L+ + L+L DN
Sbjct: 510 HGYSGSALPAEPLRHLTSLQELDFSNNHISSMSDTSFHFLKNLRLLELHDN 560
Score = 77 (32.2 bits), Expect = 2.3e-09, Sum P(3) = 2.3e-09
Identities = 43/175 (24%), Positives = 77/175 (44%)
Query: 260 AIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKI--NLIPNL--DSIDQXXX 315
A+P + L L++L LD S N+ S++ +F L +L+L+++ N I + +
Sbjct: 516 ALPAEPLRHLTSLQELDFSNNHISSMSDTSFHFLKNLRLLELHDNRIEQVLKGTFQGDIH 575
Query: 316 XXXXXXXXXXXXXXAFSLTPLGTLKCDR-LDLSGNNFSNIDSVAFKSLFSLKLVKI--NL 372
+ S L+ R L L N I+ AF +L L+ + + N
Sbjct: 576 SKLEEISLRFNHLTSISQHTFFDLEALRKLHLDDNKIDKIERRAFMNLDELEYLSLRGNK 635
Query: 373 IPNLDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSH 427
I NL D+ +F + +LE + +M QLP+ F + ++S ++SH
Sbjct: 636 INNL--ADE-SFQNLPKLEIL----DMAFNQLPNFNFDYFDQVGTLSNLNVNVSH 683
Score = 43 (20.2 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 13/43 (30%), Positives = 23/43 (53%)
Query: 412 NTNLKSV-SLKGNSLSHLEASHFPLERISFLDLSDNPLHCDCN 453
N NLK + + ++ +L S F ++ L +S L+CDC+
Sbjct: 1180 NRNLKKIPNPNTGAVPYLPNSVF----LTDLKMSHTDLNCDCD 1218
Score = 39 (18.8 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 270 SALVNLDLSGNNFSNIDSVAFKSLFS 295
S L N+ SG F+N++ + + S
Sbjct: 1118 SKLTNITFSGPQFTNLNERILRGMRS 1143
>UNIPROTKB|Q2V898 [details] [associations]
symbol:TLR4 "Toll-like receptor 4" species:9917 "Boselaphus
tragocamelus" [GO:0001875 "lipopolysaccharide receptor activity"
evidence=ISS] [GO:0032497 "detection of lipopolysaccharide"
evidence=ISS] [GO:0046696 "lipopolysaccharide receptor complex"
evidence=ISS] InterPro:IPR000157 InterPro:IPR001611
InterPro:IPR017241 InterPro:IPR027168 Pfam:PF01582
PIRSF:PIRSF037595 PROSITE:PS50104 PROSITE:PS51450 SMART:SM00255
GO:GO:0006954 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0045087 GO:GO:0005622 GO:GO:0004888
GO:GO:0046696 SUPFAM:SSF52200 GO:GO:0001875 GO:GO:0032497
EMBL:DQ286730 ProteinModelPortal:Q2V898 SMR:Q2V898
HOVERGEN:HBG018823 PANTHER:PTHR24365:SF9 Uniprot:Q2V898
Length = 841
Score = 167 (63.8 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 65/206 (31%), Positives = 98/206 (47%)
Query: 11 ILALTKLNKAICPSRC--QCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHY 68
++A +L A+ P+ C L D ++VVP N Q + L +I +
Sbjct: 1 MMARVRLAAALIPATAILSC----LRTESWDPCVQVVP---NISYQCMELNLYKIPD--- 50
Query: 69 TLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLD 128
+ I + LDLS N + LGSHNF +L L++S EI + DTF+GL L TL
Sbjct: 51 --NIPISTKMLDLSFNYLRHLGSHNFSSFPELQVLDLSRCEIKIIEDDTFQGLNHLSTLI 108
Query: 129 LSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQI--LDV 186
L+ N I + AF L+ L+ N+ D I LK+L+ L + +N I +
Sbjct: 109 LTGNPIQSLAWGAFSGLSSLQKLVAVETNLVSLNDFPI-GHLKTLKELNVAHNFIHSFKL 167
Query: 187 PNNVLSNLPHQSLHYLYLNENLIETV 212
P SNLP+ L +L L+ N I+ +
Sbjct: 168 PE-YFSNLPN--LEHLDLSNNKIQNI 190
Score = 139 (54.0 bits), Expect = 9.5e-06, P = 9.5e-06
Identities = 53/186 (28%), Positives = 88/186 (47%)
Query: 51 PEVQTIILRENRIS--NVHYTLSF-YIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISY 107
P +Q + LR N +S F L+ LDLS N + LGS NF KL +L+ +
Sbjct: 373 PSLQYLDLRRNHLSFKGCCSHADFGTTNLKHLDLSFNDVITLGS-NFMGLEKLEHLDFQH 431
Query: 108 NEISALSK-DTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDS-- 164
+ + ++ F L+ L+ LD+SY + ++ F + L+ L ++ N F+D+
Sbjct: 432 STLKQINAFSVFLSLRNLRYLDISYTNVRIVFHGIFTGLVSLKTLKMAGNT---FQDNLL 488
Query: 165 -EIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTN 223
+IF+ L +L +L L Q+ V +L SL L ++ N + + LD F
Sbjct: 489 PDIFTELTNLTVLDLSKCQLEQVAQTAFHSL--SSLQVLNMSHNKLLS-LDT---FLYEP 542
Query: 224 LHTLAL 229
LH L +
Sbjct: 543 LHLLRI 548
Score = 136 (52.9 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 43/141 (30%), Positives = 68/141 (48%)
Query: 76 LRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISA-LSKDTFKGLKELKTLDLSYNKI 134
LR LD+S + ++ F L L ++ N L D F L L LDLS ++
Sbjct: 449 LRYLDISYTNVRIVFHGIFTGLVSLKTLKMAGNTFQDNLLPDIFTELTNLTVLDLSKCQL 508
Query: 135 SVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNL 194
+ +TAF L++L +S N + D+ ++ L LRIL N+I+D L NL
Sbjct: 509 EQVAQTAFHSLSSLQVLNMSHNKLLSL-DTFLYEPLHLLRILDCSFNRIMDSKEQDLQNL 567
Query: 195 PHQSLHYLYLNENLIETVLDN 215
P ++L +L L +N V ++
Sbjct: 568 P-RNLTWLNLTQNAFACVCEH 587
Score = 102 (41.0 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 47/187 (25%), Positives = 80/187 (42%)
Query: 128 DLSYNKISVINKTAFRDTLHL--ELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILD 185
++SY + +N D + + ++L LSFN + + S FSS L++L L +I
Sbjct: 35 NISYQCME-LNLYKIPDNIPISTKMLDLSFNYLRHL-GSHNFSSFPELQVLDLSRCEIKI 92
Query: 186 VPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTL 245
+ ++ L H S L L N I+++ +F L++L L L
Sbjct: 93 IEDDTFQGLNHLST--LILTGNPIQSLAWGAFS-GLSSLQKLVAVETNLVSLNDFPIGHL 149
Query: 246 RTLHXXXXXXXXXXAIPTKQ-LSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLI 304
+TL + + S L L +LDLS N NI K L + L+ ++L
Sbjct: 150 KTLKELNVAHNFIHSFKLPEYFSNLPNLEHLDLSNNKIQNIYYEDVKVLHQMPLLNLSLD 209
Query: 305 PNLDSID 311
+L+ +D
Sbjct: 210 LSLNPLD 216
Score = 85 (35.0 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 52/246 (21%), Positives = 94/246 (38%)
Query: 336 LGTLKCDRLDLSGNNFSNIDSVA-FKSLFSLKLVKINLIPNLDSIDQRAFVDNIQLETVI 394
+G K + LD + I++ + F SL +L+ + I+ N+ + F + L+T+
Sbjct: 419 MGLEKLEHLDFQHSTLKQINAFSVFLSLRNLRYLDISYT-NVRIVFHGIFTGLVSLKTLK 477
Query: 395 INENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHF-PLERISFLDLSDN------- 446
+ N L +F TNL + L L + + F L + L++S N
Sbjct: 478 MAGNTFQDNLLPDIFTELTNLTVLDLSKCQLEQVAQTAFHSLSSLQVLNMSHNKLLSLDT 537
Query: 447 ----PLHC----DCNXXXXXXXXXXXXKSTMETTTVAYEMTSNTSISPGTTTEAQRVDRI 498
PLH DC+ ++ T +T N E QR +
Sbjct: 538 FLYEPLHLLRILDCSFNRIMDSKEQDLQNLPRNLTWL-NLTQNAF---ACVCEHQRFLQW 593
Query: 499 IKNNHSLTIVLNNLKCSSPPDIKGLEVKAVPENSVHCESNTMXXXXXXXXXXXXXGVICI 558
+K+ L + + C+ P D+K + V + N+ C+ + M V+ +
Sbjct: 594 VKDQRQLLVGAEQMMCAEPLDMKDMPVLSF-RNAT-CQMSKMIISVSVVTVLLVS-VVGV 650
Query: 559 LMYFIY 564
L+Y Y
Sbjct: 651 LVYKFY 656
Score = 64 (27.6 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 29/117 (24%), Positives = 51/117 (43%)
Query: 336 LGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFVDNIQLETV-- 393
LG+L+ D + I+ F +LKL + D+ D +F + QL ++
Sbjct: 320 LGSLQALLKDFRWQHLEIINC-DFDKFPALKLSSLKKFVFTDNKDISSFTE-FQLPSLQY 377
Query: 394 --IINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFPLERISFLDLSDNPL 448
+ +++ K S G TNLK + L N + L ++ LE++ LD + L
Sbjct: 378 LDLRRNHLSFKGCCSHADFGTTNLKHLDLSFNDVITLGSNFMGLEKLEHLDFQHSTL 434
>MGI|MGI:2669796 [details] [associations]
symbol:Rtn4rl2 "reticulon 4 receptor-like 2" species:10090
"Mus musculus" [GO:0004872 "receptor activity" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0009897 "external
side of plasma membrane" evidence=ISO] [GO:0009986 "cell surface"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0031103
"axon regeneration" evidence=TAS] [GO:0031225 "anchored to
membrane" evidence=IEA] [GO:0045121 "membrane raft" evidence=ISO]
[GO:0046658 "anchored to plasma membrane" evidence=ISO]
MGI:MGI:2669796 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0004872
InterPro:IPR000372 SMART:SM00013 GO:GO:0046658 GO:GO:0031103
GeneTree:ENSGT00690000101803 HOGENOM:HOG000116109
HOVERGEN:HBG063707 CTD:349667 KO:K16661 EMBL:AY250220 EMBL:BC132523
EMBL:BC138154 EMBL:AK142743 EMBL:BK001303 IPI:IPI00356283
RefSeq:NP_954693.1 UniGene:Mm.389289 UniGene:Mm.86447
ProteinModelPortal:Q7M6Z0 SMR:Q7M6Z0 PhosphoSite:Q7M6Z0
PRIDE:Q7M6Z0 Ensembl:ENSMUST00000054514 GeneID:269295
KEGG:mmu:269295 InParanoid:A2RTJ0 NextBio:392775 Bgee:Q7M6Z0
CleanEx:MM_RTN4RL2 Genevestigator:Q7M6Z0
GermOnline:ENSMUSG00000050896 Uniprot:Q7M6Z0
Length = 420
Score = 197 (74.4 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 59/208 (28%), Positives = 103/208 (49%)
Query: 7 CIFL-ILALTKLNKAICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISN 65
C+ L +LAL + + CP C C+ SC VP+ L P Q + L+ N I +
Sbjct: 16 CLLLTLLALPSVTPS-CPMLCTCYSSPPTVSCQANNFSSVPLSLPPSTQRLFLQNNLIRS 74
Query: 66 VHYTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNE-ISALSKDTFKGLKEL 124
+ +F L +L L N ++ + F + L L++ N + +L DTF+GL+ L
Sbjct: 75 LRPG-TFGPNLLTLWLFSNNLSTIHPGTFRHLQALEELDLGDNRHLRSLEPDTFQGLERL 133
Query: 125 KTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQIL 184
++L L ++S + FR + L+ L L N++ + +D ++F+ L +L L L N++
Sbjct: 134 QSLHLYRCQLSSLPGNIFRGLVSLQYLYLQENSLLHLQD-DLFADLANLSHLFLHGNRLR 192
Query: 185 DVPNNVLSNLPHQSLHYLYLNENLIETV 212
+ +V L SL L L+ N ++ V
Sbjct: 193 LLTEHVFRGLG--SLDRLLLHGNRLQGV 218
Score = 132 (51.5 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 58/203 (28%), Positives = 83/203 (40%)
Query: 103 LNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFE 162
L + N I +L TF G L TL L N +S I+ FR LE L L N
Sbjct: 65 LFLQNNLIRSLRPGTF-G-PNLLTLWLFSNNLSTIHPGTFRHLQALEELDLGDNRHLRSL 122
Query: 163 DSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLT 222
+ + F L+ L+ L L Q+ +P N+ L SL YLYL EN + + D+ F L
Sbjct: 123 EPDTFQGLERLQSLHLYRCQLSSLPGNIFRGLV--SLQYLYLQENSLLHLQDDLFA-DLA 179
Query: 223 NLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNF 282
NL L L L +L + LS L L L N+
Sbjct: 180 NLSHLFLHGNRLRLLTEHVFRGLGSLDRLLLHGNRLQGVHRAAFHGLSRLTILYLFNNSL 239
Query: 283 SNIDSVAFKSLFSLKLVKINLIP 305
+++ A L +L+ +++N P
Sbjct: 240 ASLPGEALADLPALEFLRLNANP 262
Score = 119 (46.9 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 40/132 (30%), Positives = 62/132 (46%)
Query: 76 LRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKIS 135
L+SL L +++ L + F L L + N + L D F L L L L N++
Sbjct: 133 LQSLHLYRCQLSSLPGNIFRGLVSLQYLYLQENSLLHLQDDLFADLANLSHLFLHGNRLR 192
Query: 136 VINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLP 195
++ + FR L+ L+L N + + F L L IL L NN + +P L++LP
Sbjct: 193 LLTEHVFRGLGSLDRLLLHGNRLQGVHRAA-FHGLSRLTILYLFNNSLASLPGEALADLP 251
Query: 196 HQSLHYLYLNEN 207
+L +L LN N
Sbjct: 252 --ALEFLRLNAN 261
Score = 42 (19.8 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 5/22 (22%), Positives = 18/22 (81%)
Query: 510 NNLKCSSPPDIKGLEVKAVPEN 531
+++ C++PP+ +G +++A+ ++
Sbjct: 284 SDVTCATPPERQGRDLRALRDS 305
>UNIPROTKB|Q96JA1 [details] [associations]
symbol:LRIG1 "Leucine-rich repeats and immunoglobulin-like
domains protein 1" species:9606 "Homo sapiens" [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR001611
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
CleanEx:HS_LIG1 Pfam:PF01463 EMBL:AF381545 EMBL:AB050468
EMBL:BC071561 EMBL:BC014276 EMBL:AL117666 IPI:IPI00000775
IPI:IPI00470372 PIR:T17346 RefSeq:NP_056356.2 UniGene:Hs.518055
ProteinModelPortal:Q96JA1 SMR:Q96JA1 IntAct:Q96JA1 STRING:Q96JA1
PhosphoSite:Q96JA1 DMDM:143811415 PaxDb:Q96JA1 PRIDE:Q96JA1
Ensembl:ENST00000273261 Ensembl:ENST00000383703 GeneID:26018
KEGG:hsa:26018 UCSC:uc003dmw.3 UCSC:uc010hoa.3 CTD:26018
GeneCards:GC03M066511 H-InvDB:HIX0003431 HGNC:HGNC:17360 MIM:608868
neXtProt:NX_Q96JA1 PharmGKB:PA38450 HOGENOM:HOG000113380
HOVERGEN:HBG052353 InParanoid:Q96JA1 OMA:ESNGVCP OrthoDB:EOG48PMJN
PhylomeDB:Q96JA1 ChiTaRS:LRIG1 GenomeRNAi:26018 NextBio:47784
Bgee:Q96JA1 CleanEx:HS_LRIG1 Genevestigator:Q96JA1
GermOnline:ENSG00000144749 Uniprot:Q96JA1
Length = 1093
Score = 204 (76.9 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 104/416 (25%), Positives = 167/416 (40%)
Query: 19 KAICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYT-LSFYIELR 77
+A C + C C L+ C GL +P L +++ L N++S + L+
Sbjct: 38 RAPCAAACTCAGDSLD--CGGRGLAALPGDLPSWTRSLNLSYNKLSEIDPAGFEDLPNLQ 95
Query: 78 SLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVI 137
+ L+ N++ + S + +++L + +N+I ++ K L+ LDLS N I+ +
Sbjct: 96 EVYLNNNELTAVPSLGAA-SSHVVSLFLQHNKIRSVEGSQLKAYLSLEVLDLSLNNITEV 154
Query: 138 NKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQ 197
T F ++ L L+ N I E +SL L+L N+I +P LP
Sbjct: 155 RNTCFPHGPPIKELNLAGNRIGTLELGAFDGLSRSLLTLRLSKNRITQLPVRAFK-LPR- 212
Query: 198 SLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXX 257
L L LN N I + +F L +L L L L +H
Sbjct: 213 -LTQLDLNRNRIRLIEGLTFQ-GLNSLEVLKLQRNNISKLTDGAFWGLSKMHVLHLEYNS 270
Query: 258 XXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINL-IPNLDSIDQXXXX 316
+ + L L+AL L LS N+ + I + F KL ++ L NL +D+
Sbjct: 271 LVEVNSGSLYGLTALHQLHLSNNSIARIHRKGWS--FCQKLHELVLSFNNLTRLDEESLA 328
Query: 317 XXXXXXXXXXXXXAFSLTPLGTLKCDR----LDLSGNNFSN-ID--SVAFKSLFSLKLVK 369
+ S G K R LDL N S I+ S AF L SL K
Sbjct: 329 ELSSLSVLRLSHNSISHIAEGAFKGLRSLRVLDLDHNEISGTIEDTSGAFSGLDSLS--K 386
Query: 370 INLIPN-LDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNS 424
+ L N + S+ +RAF LE + + N ++ + F NLK + + +S
Sbjct: 387 LTLFGNKIKSVAKRAFSGLEGLEHLNLGGNA-IRSVQFDAFVKMKNLKELHISSDS 441
Score = 48 (22.0 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 514 CSSPPDIKGLEVKAVPENSVHCE 536
C+ P +KG + +VP S C+
Sbjct: 468 CAHPESLKGQSIFSVPPESFVCD 490
>UNIPROTKB|B4DHD1 [details] [associations]
symbol:RXFP1 "Relaxin receptor 1" species:9606 "Homo
sapiens" [GO:0004930 "G-protein coupled receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR008112
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR01739
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 GO:GO:0004930
InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372 SMART:SM00013
EMBL:AC107219 UniGene:Hs.591686 HGNC:HGNC:19718 HOVERGEN:HBG026354
HOGENOM:HOG000049056 EMBL:AC019341 EMBL:AC107056 EMBL:AC108017
EMBL:AC121161 EMBL:AC125489 EMBL:AK295040 IPI:IPI00910652
SMR:B4DHD1 STRING:B4DHD1 Ensembl:ENST00000448688 UCSC:uc010iql.3
Uniprot:B4DHD1
Length = 652
Score = 184 (69.8 bits), Expect = 8.3e-11, P = 8.3e-11
Identities = 65/234 (27%), Positives = 102/234 (43%)
Query: 64 SNVHYTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKE 123
+N+ S + ++ L N I L F+ + L L + N+I+++S F+GL
Sbjct: 35 TNLRAVPSVSSNVTAMSLQWNLIRKLPPDCFKNYHDLQKLYLQNNKITSISIYAFRGLNS 94
Query: 124 LKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQI 183
L L LS+N+I+ + F D LE LI+ N+++ F L SL +L L NN +
Sbjct: 95 LTKLYLSHNRITFLKPGVFEDLHRLEWLIIEDNHLSRISPPT-FYGLNSLILLVLMNNVL 153
Query: 184 LDVPNNVL-SNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXX 242
+P+ L ++P LH+L + +N I + +N+F L L L L
Sbjct: 154 TRLPDKPLCQHMPR--LHWLVMRKNKINHLNENTFA-PLQKLDELDLGSNKIENLPPLIF 210
Query: 243 VTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSL 296
L+ L I Q L L +L L G SNI F+ L +L
Sbjct: 211 KDLKELSQLNLSYNPIQKIQANQFDYLVKLKSLSLEGIEISNIQQRMFRPLMNL 264
Score = 168 (64.2 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 56/187 (29%), Positives = 83/187 (44%)
Query: 27 QCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYT-LSFYIELRSLDLSVNK 85
QC Q LE C + L VP ++ V + L+ N I + Y +L+ L L NK
Sbjct: 22 QCLCQGLELDCDETNLRAVP-SVSSNVTAMSLQWNLIRKLPPDCFKNYHDLQKLYLQNNK 80
Query: 86 INVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDT 145
I + + F N L L +S+N I+ L F+ L L+ L + N +S I+ F
Sbjct: 81 ITSISIYAFRGLNSLTKLYLSHNRITFLKPGVFEDLHRLEWLIIEDNHLSRISPPTFYGL 140
Query: 146 LHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLN 205
L LL+L N +T D + + L L + N+I + N + P Q L L L
Sbjct: 141 NSLILLVLMNNVLTRLPDKPLCQHMPRLHWLVMRKNKINHLNENTFA--PLQKLDELDLG 198
Query: 206 ENLIETV 212
N IE +
Sbjct: 199 SNKIENL 205
Score = 143 (55.4 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 55/210 (26%), Positives = 84/210 (40%)
Query: 103 LNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFE 162
+++ +N I L D FK +L+ L L NKI+ I+ AFR L L LS N IT+ +
Sbjct: 50 MSLQWNLIRKLPPDCFKNYHDLQKLYLQNNKITSISIYAFRGLNSLTKLYLSHNRITFLK 109
Query: 163 DSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLT 222
+F L L L +++N + + L SL L L N++ + D +
Sbjct: 110 PG-VFEDLHRLEWLIIEDNHLSRISPPTFYGL--NSLILLVLMNNVLTRLPDKPLCQHMP 166
Query: 223 NLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNF 282
LH L + L+ L +P L L L+LS N
Sbjct: 167 RLHWLVMRKNKINHLNENTFAPLQKLDELDLGSNKIENLPPLIFKDLKELSQLNLSYNPI 226
Query: 283 SNIDSVAFKSLFSLKLVKINLIPNLDSIDQ 312
I + F L LK + + I + +I Q
Sbjct: 227 QKIQANQFDYLVKLKSLSLEGI-EISNIQQ 255
Score = 123 (48.4 bits), Expect = 0.00037, P = 0.00037
Identities = 33/99 (33%), Positives = 56/99 (56%)
Query: 51 PEVQTIILRENRISNVHY-TLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNE 109
P + +++R+N+I++++ T + +L LDL NKI L F+ +L LN+SYN
Sbjct: 166 PRLHWLVMRKNKINHLNENTFAPLQKLDELDLGSNKIENLPPLIFKDLKELSQLNLSYNP 225
Query: 110 ISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHL 148
I + + F L +LK+L L +IS I + FR ++L
Sbjct: 226 IQKIQANQFDYLVKLKSLSLEGIEISNIQQRMFRPLMNL 264
Score = 80 (33.2 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 20/82 (24%), Positives = 39/82 (47%)
Query: 340 KCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFVDNIQLETVIINENM 399
K D LDL N N+ + FK L L + ++ P + I F ++L+++ + E +
Sbjct: 191 KLDELDLGSNKIENLPPLIFKDLKELSQLNLSYNP-IQKIQANQFDYLVKLKSLSL-EGI 248
Query: 400 NLKQLPSKLFQGNTNLKSVSLK 421
+ + ++F+ NL + K
Sbjct: 249 EISNIQQRMFRPLMNLSHIYFK 270
>UNIPROTKB|F1NY48 [details] [associations]
symbol:RXFP1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004930 "G-protein coupled receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007188 "adenylate cyclase-modulating G-protein coupled
receptor signaling pathway" evidence=IEA] [GO:0007567 "parturition"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030198 "extracellular matrix organization" evidence=IEA]
[GO:0042562 "hormone binding" evidence=IEA] [GO:0060427 "lung
connective tissue development" evidence=IEA] [GO:0060658 "nipple
morphogenesis" evidence=IEA] InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002172 InterPro:IPR008112 InterPro:IPR017452
Pfam:PF00001 Pfam:PF00057 PRINTS:PR00237 PRINTS:PR01739
PROSITE:PS50068 PROSITE:PS50262 PROSITE:PS51450 SMART:SM00192
GO:GO:0016021 GO:GO:0030154 GO:GO:0004930 InterPro:IPR003591
SMART:SM00369 GO:GO:0030198 GO:GO:0042562 GO:GO:0007188
Gene3D:4.10.400.10 InterPro:IPR023415 SUPFAM:SSF57424
PROSITE:PS01209 InterPro:IPR000372 SMART:SM00013 OMA:YTLTTRP
GeneTree:ENSGT00650000093266 EMBL:AADN02016502 IPI:IPI00603372
ProteinModelPortal:F1NY48 Ensembl:ENSGALT00000015353 Uniprot:F1NY48
Length = 755
Score = 201 (75.8 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 73/275 (26%), Positives = 123/275 (44%)
Query: 23 PSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTL-SFYIELRSLDL 81
P C+C Q LE C A L VP+ + + T+ L++N + ++ + Y +L++L L
Sbjct: 98 PVECKC--QGLEVFCDAAKLRDVPL-VPSNITTMSLQKNLLRKLYADVFRKYQDLKNLYL 154
Query: 82 SVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTA 141
NKI + H F+ L L +S N+I+ L F+ L +L+ L + N+I+ I+ +
Sbjct: 155 QDNKIRAVSKHAFKGLYNLTKLYLSNNKITNLKPRVFEDLHKLEWLIIENNRINRISPST 214
Query: 142 FRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHY 201
F L LL + N++ + D + + L L L+ N I + N ++ + +L
Sbjct: 215 FYGLKSLILLDMMNNSLAHLPDKPLCQYMPRLNWLDLEGNHIHHLRN--VTFISCSTLTV 272
Query: 202 LYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAI 261
L + +N I ++ +NSF +L L L L L+ L I
Sbjct: 273 LVMRQNKISSLNENSFS-SLQMLDELDLASNEIESLPAYVFKDLKELSQLNLSYNPIKKI 331
Query: 262 PTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSL 296
Q L+ L +L L G +NI F L +L
Sbjct: 332 QIDQFDFLTKLKSLSLEGIEIANIQRRMFIPLRNL 366
Score = 155 (59.6 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 54/216 (25%), Positives = 91/216 (42%)
Query: 98 NKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNN 157
+ + +++ N + L D F+ ++LK L L NKI ++K AF+ +L L LS N
Sbjct: 123 SNITTMSLQKNLLRKLYADVFRKYQDLKNLYLQDNKIRAVSKHAFKGLYNLTKLYLSNNK 182
Query: 158 ITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSF 217
IT + +F L L L ++NN+I + + L +SL L + N + + D
Sbjct: 183 ITNLKP-RVFEDLHKLEWLIIENNRINRISPSTFYGL--KSLILLDMMNNSLAHLPDKPL 239
Query: 218 PFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDL 277
+ L+ L L ++ TL ++ S L L LDL
Sbjct: 240 CQYMPRLNWLDLEGNHIHHLRNVTFISCSTLTVLVMRQNKISSLNENSFSSLQMLDELDL 299
Query: 278 SGNNFSNIDSVAFKSLFSLKLVKINLIP-NLDSIDQ 312
+ N ++ + FK L L + ++ P IDQ
Sbjct: 300 ASNEIESLPAYVFKDLKELSQLNLSYNPIKKIQIDQ 335
>ZFIN|ZDB-GENE-031113-8 [details] [associations]
symbol:lrrc15 "leucine rich repeat containing 15"
species:7955 "Danio rerio" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001611 PROSITE:PS51450 ZFIN:ZDB-GENE-031113-8
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR000372 SMART:SM00013 GeneTree:ENSGT00700000104286
OMA:NHLEYIP EMBL:BX950188 EMBL:BX957243 IPI:IPI00628487
UniGene:Dr.18765 Ensembl:ENSDART00000104248 HOVERGEN:HBG095770
Uniprot:B0S8K3
Length = 564
Score = 199 (75.1 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 88/425 (20%), Positives = 173/425 (40%)
Query: 8 IFLILALTKLNKAI---CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRIS 64
+F+I+ + + KA+ CP CQC Q + C ++ +P+ + P + +++ I
Sbjct: 5 LFVIIGMCAM-KAVASSCPESCQC--QVTKIVCQGFSVKEIPLPMPPTINALVISNTSIQ 61
Query: 65 NVHYT-LSFYIELRSLDLSVNK-INVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLK 122
++ + + E +L ++ N I + H F+ L L S +++L + F+ L
Sbjct: 62 SLKPSDFQTFAETLTLFVAKNSNITEVEPHTFDQAFNLNVLGFSGTMLTSLPDNLFQNLT 121
Query: 123 ELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQ 182
L TL LS NK+ V+ + +++ L LS N ++ + + F L L +L L N
Sbjct: 122 ALTTLTLSGNKLEVLPSSLLTPLVNVNKLDLSKNLLSSLSE-DAFRGLDQLEMLMLQRNS 180
Query: 183 ILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXX 242
I + ++ L H L L+L +N + + F L NL L L
Sbjct: 181 IKQLHSSTFQGLSH--LRSLFLQQNELTDIPAGLFD-DLVNLEVLHLQDNKIEQLPANLF 237
Query: 243 VTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKL-VKI 301
++ L +P+ L L + L N S + F + +L +
Sbjct: 238 AKVQKLKKLYLSSNRLSLLPSGIFLNLPNLTHFSLYDNRLSRLMPETFGPMALQELWLYD 297
Query: 302 NLIPNLDSIDQXXXXXXXXXXXXXXXXXAFSLTP---LGTLKCDRLDLSGNNFSNIDSVA 358
NL+ +L+ + ++P G ++ + L N +NI+
Sbjct: 298 NLLTHLE--ENVFSNLTNIRLLVISRNRIQYISPGAFNGLIELKEVSLHTNRLTNIEPGI 355
Query: 359 FKSLFSLKLVKINLIPNLDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSV 418
F+ L +L + I + I + +D + +++ +N +L+ LP + +++V
Sbjct: 356 FRGLPNLANISIEN-NQIKQIPIQ-LLDGVSRLSLLEMQNNSLQNLPKDFLNTLSIVENV 413
Query: 419 SLKGN 423
L N
Sbjct: 414 ILHEN 418
Score = 155 (59.6 bits), Expect = 9.7e-08, P = 9.7e-08
Identities = 97/445 (21%), Positives = 178/445 (40%)
Query: 103 LNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFE 162
L IS I +L F+ E TL ++ N ++ L +L F+
Sbjct: 53 LVISNTSIQSLKPSDFQTFAETLTLFVAKNS-NITEVEPHTFDQAFNLNVLGFSGTMLTS 111
Query: 163 -DSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTL 221
+F +L +L L L N++ +P+++L+ P +++ L L++NL+ ++ +++F L
Sbjct: 112 LPDNLFQNLTALTTLTLSGNKLEVLPSSLLT--PLVNVNKLDLSKNLLSSLSEDAFR-GL 168
Query: 222 TNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNN 281
L L L L L IP L L L L N
Sbjct: 169 DQLEMLMLQRNSIKQLHSSTFQGLSHLRSLFLQQNELTDIPAGLFDDLVNLEVLHLQDNK 228
Query: 282 FSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQXXXXXXXXXXXXXXXXXAFS-LTP--LG 337
+ + F + LK K+ L N L + S L P G
Sbjct: 229 IEQLPANLFAKVQKLK--KLYLSSNRLSLLPSGIFLNLPNLTHFSLYDNRLSRLMPETFG 286
Query: 338 TLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFVDNIQLETVIINE 397
+ L L N ++++ F +L +++L+ I+ + I AF I+L+ V ++
Sbjct: 287 PMALQELWLYDNLLTHLEENVFSNLTNIRLLVISR-NRIQYISPGAFNGLIELKEVSLHT 345
Query: 398 NMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPLHCDCNXXX 456
N L + +F+G NL ++S++ N + + + R+S L++ +N L N
Sbjct: 346 N-RLTNIEPGIFRGLPNLANISIENNQIKQIPIQLLDGVSRLSLLEMQNNSLQ---NLPK 401
Query: 457 XXXXXXXXXKSTMETTTVAYE--MTSNTSISPGTTTEAQRVDRIIKNNHSLTIVLNNLKC 514
S +E + +E + I P +Q +++ KN L++V+ C
Sbjct: 402 DFLNTL----SIVENV-ILHENPWRCDQDIIPFWDWLSQHSEKV-KN---LSLVM----C 448
Query: 515 SSPPDIKGLEVKAVPENSVHCESNT 539
SSPP + G V+ + E+ + + T
Sbjct: 449 SSPPPLNGRIVRELIEDDIMVQEMT 473
Score = 130 (50.8 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 73/333 (21%), Positives = 130/333 (39%)
Query: 124 LKTLDLSYNKISVINKTAFRDTLH-LELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQ 182
+ L +S I + + F+ L L + +NIT E F +L +L
Sbjct: 50 INALVISNTSIQSLKPSDFQTFAETLTLFVAKNSNITEVEP-HTFDQAFNLNVLGFSGTM 108
Query: 183 ILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXX 242
+ +P+N+ NL +L L L+ N +E VL +S L N++ L L
Sbjct: 109 LTSLPDNLFQNLT--ALTTLTLSGNKLE-VLPSSLLTPLVNVNKLDLSKNLLSSLSEDAF 165
Query: 243 VTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
L L + + LS L +L L N ++I + F L +L++ ++
Sbjct: 166 RGLDQLEMLMLQRNSIKQLHSSTFQGLSHLRSLFLQQNELTDIPAGLFDDLVNLEV--LH 223
Query: 303 LIPN-LDSIDQXXXXXXXXXXXXXXXXXAFSLTPLGT-LKCDRL---DLSGNNFSNIDSV 357
L N ++ + SL P G L L L N S +
Sbjct: 224 LQDNKIEQLPANLFAKVQKLKKLYLSSNRLSLLPSGIFLNLPNLTHFSLYDNRLSRLMPE 283
Query: 358 AFKSLFSLKLVKINLIPNL-DSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLK 416
F + L ++ L NL +++ F + + ++I+ N ++ + F G LK
Sbjct: 284 TFGPM---ALQELWLYDNLLTHLEENVFSNLTNIRLLVISRN-RIQYISPGAFNGLIELK 339
Query: 417 SVSLKGNSLSHLEASHFP-LERISFLDLSDNPL 448
VSL N L+++E F L ++ + + +N +
Sbjct: 340 EVSLHTNRLTNIEPGIFRGLPNLANISIENNQI 372
>UNIPROTKB|F1MI30 [details] [associations]
symbol:RXFP1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060658 "nipple morphogenesis" evidence=IEA]
[GO:0060427 "lung connective tissue development" evidence=IEA]
[GO:0042562 "hormone binding" evidence=IEA] [GO:0030198
"extracellular matrix organization" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0007567 "parturition"
evidence=IEA] [GO:0007188 "adenylate cyclase-modulating G-protein
coupled receptor signaling pathway" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0004930 "G-protein coupled
receptor activity" evidence=IEA] InterPro:IPR001611
InterPro:IPR000276 InterPro:IPR002172 InterPro:IPR008112
InterPro:IPR017452 Pfam:PF00001 Pfam:PF00057 PRINTS:PR00237
PRINTS:PR01739 PROSITE:PS50068 PROSITE:PS50262 PROSITE:PS51450
SMART:SM00192 GO:GO:0016021 GO:GO:0030154 GO:GO:0004930
InterPro:IPR003591 SMART:SM00369 GO:GO:0030198 GO:GO:0042562
GO:GO:0007188 Gene3D:4.10.400.10 InterPro:IPR023415 SUPFAM:SSF57424
PROSITE:PS01209 GO:GO:0007567 InterPro:IPR000372 SMART:SM00013
GO:GO:0060427 CTD:59350 KO:K04306 OMA:YTLTTRP GO:GO:0060658
GeneTree:ENSGT00650000093266 EMBL:DAAA02044865 EMBL:DAAA02044866
EMBL:DAAA02044867 IPI:IPI00685546 RefSeq:XP_002694461.1
ProteinModelPortal:F1MI30 Ensembl:ENSBTAT00000013620 GeneID:532277
KEGG:bta:532277 NextBio:20875654 Uniprot:F1MI30
Length = 759
Score = 201 (75.8 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 76/299 (25%), Positives = 120/299 (40%)
Query: 2 NYFLTCIFLILALTKLNKAICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILREN 61
NY +T ++ + + QC Q LE C + L VP ++ V + LR N
Sbjct: 79 NYKMTSLYPSIVAETSECLVGSPPMQCICQGLELECDEINLRAVP-SVSSNVTFMSLRRN 137
Query: 62 RISNVHYTL-SFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKG 120
I + + Y L++L L NKI + + F L L +S+N I+ L F+
Sbjct: 138 LIRKLPPNVFKRYHGLQTLCLQNNKIRSVSVYAFRGLYSLTKLYLSHNRITLLKPGVFED 197
Query: 121 LKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDN 180
L L+ L + N ++ I+ F L LL+L N +T D + + L L +
Sbjct: 198 LHRLEWLIIEDNHLNRISPLTFYGLNSLILLVLMNNVLTRLPDKSLCQHMPRLHWLDFEG 257
Query: 181 NQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXX 240
N I ++ N L+ + +L L + +N I + +N+F L L L L
Sbjct: 258 NHIHNLRN--LTFISCSNLTVLVMRKNKINHLSENTFA-PLQKLDELDLGSNKIENLSPH 314
Query: 241 XXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLV 299
L+ L I Q L L +L L G SNI F+ L +L +
Sbjct: 315 IFKDLKELSQLNLSYNPIQTIQANQFDNLIKLKSLSLEGIEISNIQQRMFRPLMNLSYI 373
Score = 136 (52.9 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 55/229 (24%), Positives = 89/229 (38%)
Query: 77 RSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISV 136
+ L+L ++IN+ + + + +++ N I L + FK L+TL L NKI
Sbjct: 108 QGLELECDEINLRAVPSVS--SNVTFMSLRRNLIRKLPPNVFKRYHGLQTLCLQNNKIRS 165
Query: 137 INKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPH 196
++ AFR L L LS N IT + +F L L L +++N + + L
Sbjct: 166 VSVYAFRGLYSLTKLYLSHNRITLLKPG-VFEDLHRLEWLIIEDNHLNRISPLTFYGL-- 222
Query: 197 QSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXX 256
SL L L N++ + D S + LH L ++ L
Sbjct: 223 NSLILLVLMNNVLTRLPDKSLCQHMPRLHWLDFEGNHIHNLRNLTFISCSNLTVLVMRKN 282
Query: 257 XXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIP 305
+ + L L LDL N N+ FK L L + ++ P
Sbjct: 283 KINHLSENTFAPLQKLDELDLGSNKIENLSPHIFKDLKELSQLNLSYNP 331
Score = 131 (51.2 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 50/175 (28%), Positives = 78/175 (44%)
Query: 51 PEVQTIILRENRISNVHYTLSFYI--ELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYN 108
P + + N I N+ L+F L L + NKIN L + F KL L++ N
Sbjct: 248 PRLHWLDFEGNHIHNLR-NLTFISCSNLTVLVMRKNKINHLSENTFAPLQKLDELDLGSN 306
Query: 109 EISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFS 168
+I LS FK LKEL L+LSYN I I F + + L+ L L I+ + +F
Sbjct: 307 KIENLSPHIFKDLKELSQLNLSYNPIQTIQANQFDNLIKLKSLSLEGIEISNIQQ-RMFR 365
Query: 169 SLKSLRILKLDNNQILDVPNNVLSNLPH-QSLHYLYLNENLIETVLDNSFPFTLT 222
L +L + Q +V P+ L L E+L+ +++ F + ++
Sbjct: 366 PLMNLSYIYFKRFQYCGYAPHVRICKPNTDGLSSL---EDLLASIIQRVFVWVVS 417
>UNIPROTKB|E9PCA3 [details] [associations]
symbol:RXFP1 "Relaxin receptor 1" species:9606 "Homo
sapiens" [GO:0004930 "G-protein coupled receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007188 "adenylate cyclase-modulating G-protein coupled
receptor signaling pathway" evidence=IEA] [GO:0007567 "parturition"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030198 "extracellular matrix organization" evidence=IEA]
[GO:0042562 "hormone binding" evidence=IEA] [GO:0060427 "lung
connective tissue development" evidence=IEA] [GO:0060658 "nipple
morphogenesis" evidence=IEA] InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR008112 InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237
PRINTS:PR01739 PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021
GO:GO:0030154 GO:GO:0004930 GO:GO:0007189 InterPro:IPR003591
SMART:SM00369 GO:GO:0030198 GO:GO:0042562 GO:GO:0007567
InterPro:IPR000372 SMART:SM00013 EMBL:AC107219 GO:GO:0060427
HGNC:HGNC:19718 GO:GO:0060658 EMBL:AC019341 EMBL:AC107056
EMBL:AC108017 EMBL:AC121161 EMBL:AC125489 IPI:IPI00965023
ProteinModelPortal:E9PCA3 SMR:E9PCA3 Ensembl:ENST00000460056
ArrayExpress:E9PCA3 Bgee:E9PCA3 Uniprot:E9PCA3
Length = 676
Score = 200 (75.5 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 75/271 (27%), Positives = 112/271 (41%)
Query: 27 QCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYT-LSFYIELRSLDLSVNK 85
QC Q LE C + L VP ++ V + L+ N I + Y +L+ L L NK
Sbjct: 22 QCLCQGLELDCDETNLRAVP-SVSSNVTAMSLQWNLIRKLPPDCFKNYHDLQKLYLQNNK 80
Query: 86 INVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDT 145
I + + F N L L +S+N I+ L F+ L L+ L + N +S I+ F
Sbjct: 81 ITSISIYAFRGLNSLTKLYLSHNRITFLKPGVFEDLHRLEWLIIEDNHLSRISPPTFYGL 140
Query: 146 LHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLN 205
L LL+L N +T D + + L L L+ N I ++ N L+ + +L L +
Sbjct: 141 NSLILLVLMNNVLTRLPDKPLCQHMPRLHWLDLEGNHIHNLRN--LTFISCSNLTVLVMR 198
Query: 206 ENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQ 265
+N I + +N+F L L L L L+ L I Q
Sbjct: 199 KNKINHLNENTFA-PLQKLDELDLGSNKIENLPPLIFKDLKELSQLNLSYNPIQKIQANQ 257
Query: 266 LSKLSALVNLDLSGNNFSNIDSVAFKSLFSL 296
L L +L L G SNI F+ L +L
Sbjct: 258 FDYLVKLKSLSLEGIEISNIQQRMFRPLMNL 288
Score = 148 (57.2 bits), Expect = 7.5e-07, P = 7.5e-07
Identities = 52/203 (25%), Positives = 81/203 (39%)
Query: 103 LNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFE 162
+++ +N I L D FK +L+ L L NKI+ I+ AFR L L LS N IT+ +
Sbjct: 50 MSLQWNLIRKLPPDCFKNYHDLQKLYLQNNKITSISIYAFRGLNSLTKLYLSHNRITFLK 109
Query: 163 DSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLT 222
+F L L L +++N + + L SL L L N++ + D +
Sbjct: 110 PG-VFEDLHRLEWLIIEDNHLSRISPPTFYGL--NSLILLVLMNNVLTRLPDKPLCQHMP 166
Query: 223 NLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNF 282
LH L L ++ L + + L L LDL N
Sbjct: 167 RLHWLDLEGNHIHNLRNLTFISCSNLTVLVMRKNKINHLNENTFAPLQKLDELDLGSNKI 226
Query: 283 SNIDSVAFKSLFSLKLVKINLIP 305
N+ + FK L L + ++ P
Sbjct: 227 ENLPPLIFKDLKELSQLNLSYNP 249
>UNIPROTKB|F1MBT2 [details] [associations]
symbol:LINGO1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048715 "negative regulation of oligodendrocyte
differentiation" evidence=IEA] [GO:0043491 "protein kinase B
signaling cascade" evidence=IEA] [GO:0031175 "neuron projection
development" evidence=IEA] [GO:0021954 "central nervous system
neuron development" evidence=IEA] [GO:0005154 "epidermal growth
factor receptor binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0043491
GO:GO:0031175 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GO:GO:0021954 GO:GO:0048715
GeneTree:ENSGT00690000101682 OMA:RIRDRKP EMBL:DAAA02052480
IPI:IPI01003440 Ensembl:ENSBTAT00000031490 Uniprot:F1MBT2
Length = 614
Score = 207 (77.9 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 79/299 (26%), Positives = 121/299 (40%)
Query: 8 IFLILALTKLNKAI-CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNV 66
+ L+L A CP RC+C Q C VP + E + + L +NRI +
Sbjct: 21 LLLVLGSVLSGSATGCPPRCECSAQDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTL 80
Query: 67 HYT-LSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELK 125
+ + + L L+L+ N ++ + F L L + N + + F GL L
Sbjct: 81 NQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLT 140
Query: 126 TLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILD 185
LD+S NKI ++ F+D +L+ L + N++ Y FS L SL L L+ +
Sbjct: 141 KLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISH-RAFSGLNSLEQLTLEKCNLTS 199
Query: 186 VPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTL 245
+P LS+L H L L L I + D SF L L L + +
Sbjct: 200 IPTEALSHL-H-GLIVLRLRHLNINAIRDYSFK-RLYRLKVLEISHWPYLDTMTPNCLYG 256
Query: 246 RTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLI 304
L A+P + L L L+LS N S I+ L L+L +I L+
Sbjct: 257 LNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHEL--LRLQEIQLV 313
Score = 134 (52.2 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 70/308 (22%), Positives = 126/308 (40%)
Query: 150 LLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLI 209
LL L N I E F+S L L+L+ N + V +NL +L L L N +
Sbjct: 69 LLDLGKNRIKTLNQDE-FASFPHLEELELNENIVSAVEPGAFNNL--FNLRTLGLRSNRL 125
Query: 210 ETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKL 269
+ + F L+NL L + L L I + S L
Sbjct: 126 KLIPLGVFT-GLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGL 184
Query: 270 SALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQXXXXXXXXXXXXXXXXX 329
++L L L N ++I + A L L ++++ + N+++I
Sbjct: 185 NSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHL-NINAIRDYSFKRLYRLKVLEISHW 243
Query: 330 AF--SLTP--LGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFV 385
+ ++TP L L L ++ N + + +A + L L+ + ++ P + +I+
Sbjct: 244 PYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNP-ISTIEGSMLH 302
Query: 386 DNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHF-PLERISFLDLS 444
+ ++L+ + + L + F+G L+ +++ GN L+ LE S F + + L L
Sbjct: 303 ELLRLQEIQLVGGQ-LAVVEPYAFRGLNYLRVLNVSGNQLTTLEESAFHSVGNLETLILD 361
Query: 445 DNPLHCDC 452
NPL CDC
Sbjct: 362 SNPLACDC 369
Score = 132 (51.5 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 71/309 (22%), Positives = 128/309 (41%)
Query: 75 ELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKI 134
E R LDL N+I L F L L ++ N +SA+ F L L+TL L N++
Sbjct: 66 ETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRL 125
Query: 135 SVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNL 194
+I F +L L +S N I D +F L +L+ L++ +N ++ + + S L
Sbjct: 126 KLIPLGVFTGLSNLTKLDISENKIVILLDY-MFQDLYNLKSLEVGDNDLVYISHRAFSGL 184
Query: 195 PHQSLHYLYLNE-NLIETVLDNSFPF-TLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXX 252
SL L L + NL S P L++LH L + + + L+
Sbjct: 185 --NSLEQLTLEKCNL------TSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLK 236
Query: 253 XXXXXXXA-IPTKQLSKLSAL--VNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDS 309
+ T + L L +L ++ N + + +A + L L+ + ++ P + +
Sbjct: 237 VLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNP-IST 295
Query: 310 IDQXXXXXXXXXXXXXXXXXAFSLT-PLGT--LKCDR-LDLSGNNFSNIDSVAFKSLFSL 365
I+ ++ P L R L++SGN + ++ AF S+ +L
Sbjct: 296 IEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESAFHSVGNL 355
Query: 366 KLVKINLIP 374
+ + ++ P
Sbjct: 356 ETLILDSNP 364
Score = 37 (18.1 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 6/17 (35%), Positives = 11/17 (64%)
Query: 514 CSSPPDIKGLEVKAVPE 530
C++P ++G E K P+
Sbjct: 390 CATPEFVQGKEFKDFPD 406
>UNIPROTKB|F1PGX0 [details] [associations]
symbol:LINGO1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048715 "negative regulation of
oligodendrocyte differentiation" evidence=IEA] [GO:0043491 "protein
kinase B signaling cascade" evidence=IEA] [GO:0031175 "neuron
projection development" evidence=IEA] [GO:0021954 "central nervous
system neuron development" evidence=IEA] [GO:0005154 "epidermal
growth factor receptor binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0043491
GO:GO:0031175 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GO:GO:0021954 GO:GO:0048715
GeneTree:ENSGT00690000101682 OMA:RIRDRKP EMBL:AAEX03016347
ProteinModelPortal:F1PGX0 Ensembl:ENSCAFT00000028688 Uniprot:F1PGX0
Length = 620
Score = 207 (77.9 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 79/299 (26%), Positives = 121/299 (40%)
Query: 8 IFLILALTKLNKAI-CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNV 66
+ L+L A CP RC+C Q C VP + E + + L +NRI +
Sbjct: 27 LLLVLGSVLSGSATGCPPRCECSAQDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTL 86
Query: 67 HYT-LSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELK 125
+ + + L L+L+ N ++ + F L L + N + + F GL L
Sbjct: 87 NQDEFASFPHLEELELNENIVSAVEPGAFNNLFSLRTLGLRSNRLKLIPLGVFTGLSNLT 146
Query: 126 TLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILD 185
LD+S NKI ++ F+D +L+ L + N++ Y FS L SL L L+ +
Sbjct: 147 KLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISH-RAFSGLNSLEQLTLEKCNLTS 205
Query: 186 VPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTL 245
+P LS+L H SL L L I + D SF L L L + +
Sbjct: 206 IPTEALSHL-H-SLIVLRLRHLNINAIRDYSFK-RLYRLKVLEISHWPYLDTMTPNCLYG 262
Query: 246 RTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLI 304
L A+P + L L L+LS N I+ L L+L +I L+
Sbjct: 263 LNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIGTIEGSMLHEL--LRLQEIQLV 319
Score = 199 (75.1 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 86/308 (27%), Positives = 136/308 (44%)
Query: 123 ELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQ 182
E + LDL N+I +N+ F HLE L L+ N ++ E F++L SLR L L +N+
Sbjct: 72 ETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGA-FNNLFSLRTLGLRSNR 130
Query: 183 ILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXX 242
+ +P V + L +L L ++EN I +LD F L NL +L +
Sbjct: 131 LKLIPLGVFTGL--SNLTKLDISENKIVILLDYMFQ-DLYNLKSLEVGDNDLVYISHRAF 187
Query: 243 VTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
L +L +IPT+ LS L +L+ L L N + I +FK L+ LK+++I+
Sbjct: 188 SGLNSLEQLTLEKCNLTSIPTEALSHLHSLIVLRLRHLNINAIRDYSFKRLYRLKVLEIS 247
Query: 303 LIPNLDSIDQXXXXXXXXXXXXXXXXXAFSLTPLGT--LKCDR-LDLSGNNFSNIDSVAF 359
P LD++ ++ L L R L+LS N I+
Sbjct: 248 HWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIGTIEGSML 307
Query: 360 KSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSV 418
L L+L +I L+ L ++ AF L + ++ N L L F NL+++
Sbjct: 308 HEL--LRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQ-LTTLEESAFHSVGNLETL 364
Query: 419 SLKGNSLS 426
L N L+
Sbjct: 365 ILDSNPLA 372
Score = 140 (54.3 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 72/308 (23%), Positives = 127/308 (41%)
Query: 150 LLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLI 209
LL L N I E F+S L L+L+ N + V +NL SL L L N +
Sbjct: 75 LLDLGKNRIKTLNQDE-FASFPHLEELELNENIVSAVEPGAFNNL--FSLRTLGLRSNRL 131
Query: 210 ETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKL 269
+ + F L+NL L + L L I + S L
Sbjct: 132 KLIPLGVFT-GLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGL 190
Query: 270 SALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQXXXXXXXXXXXXXXXXX 329
++L L L N ++I + A L SL ++++ + N+++I
Sbjct: 191 NSLEQLTLEKCNLTSIPTEALSHLHSLIVLRLRHL-NINAIRDYSFKRLYRLKVLEISHW 249
Query: 330 AF--SLTP--LGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFV 385
+ ++TP L L L ++ N + + +A + L L+ + ++ P + +I+
Sbjct: 250 PYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNP-IGTIEGSMLH 308
Query: 386 DNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHF-PLERISFLDLS 444
+ ++L+ + + L + F+G L+ +++ GN L+ LE S F + + L L
Sbjct: 309 ELLRLQEIQLVGGQ-LAVVEPYAFRGLNYLRVLNVSGNQLTTLEESAFHSVGNLETLILD 367
Query: 445 DNPLHCDC 452
NPL CDC
Sbjct: 368 SNPLACDC 375
Score = 37 (18.1 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 6/17 (35%), Positives = 11/17 (64%)
Query: 514 CSSPPDIKGLEVKAVPE 530
C++P ++G E K P+
Sbjct: 396 CATPEFVQGKEFKDFPD 412
>UNIPROTKB|Q96FE5 [details] [associations]
symbol:LINGO1 "Leucine-rich repeat and immunoglobulin-like
domain-containing nogo receptor-interacting protein 1" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005154 "epidermal growth factor receptor binding"
evidence=IEA] [GO:0021954 "central nervous system neuron
development" evidence=IEA] [GO:0031175 "neuron projection
development" evidence=IEA] [GO:0043491 "protein kinase B signaling
cascade" evidence=IEA] [GO:0048715 "negative regulation of
oligodendrocyte differentiation" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=TAS] [GO:0048011 "neurotrophin TRK receptor
signaling pathway" evidence=TAS] [GO:0050770 "regulation of
axonogenesis" evidence=TAS] [GO:0050771 "negative regulation of
axonogenesis" evidence=TAS] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021
GO:GO:0005886 Reactome:REACT_111102 GO:GO:0048011 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
EMBL:CH471136 GO:GO:0043491 GO:GO:0031175 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 GO:GO:0050771
GO:GO:0021954 MEROPS:I43.001 GO:GO:0048715 Orphanet:862
OrthoDB:EOG40S0F8 CTD:84894 HOVERGEN:HBG057546 OMA:RIRDRKP
EMBL:AY324320 EMBL:AY324322 EMBL:AY324323 EMBL:AY358284
EMBL:AK027500 EMBL:AK291363 EMBL:BC011057 EMBL:BC068558
EMBL:AL834260 IPI:IPI00465325 IPI:IPI00795326 RefSeq:NP_116197.4
UniGene:Hs.656765 UniGene:Hs.736275 PDB:2ID5 PDBsum:2ID5
ProteinModelPortal:Q96FE5 SMR:Q96FE5 IntAct:Q96FE5
MINT:MINT-1378183 STRING:Q96FE5 PhosphoSite:Q96FE5 PaxDb:Q96FE5
PRIDE:Q96FE5 Ensembl:ENST00000355300 Ensembl:ENST00000561030
GeneID:84894 KEGG:hsa:84894 UCSC:uc002bct.1 GeneCards:GC15M077905
H-InvDB:HIX0012466 HGNC:HGNC:21205 HPA:HPA011630 MIM:609791
neXtProt:NX_Q96FE5 PharmGKB:PA162394087 InParanoid:Q96FE5
EvolutionaryTrace:Q96FE5 GenomeRNAi:84894 NextBio:75236 Bgee:Q96FE5
CleanEx:HS_LINGO1 Genevestigator:Q96FE5 Uniprot:Q96FE5
Length = 620
Score = 207 (77.9 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 79/299 (26%), Positives = 121/299 (40%)
Query: 8 IFLILALTKLNKAI-CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNV 66
+ L+L A CP RC+C Q C VP + E + + L +NRI +
Sbjct: 27 LLLVLGSVLSGSATGCPPRCECSAQDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTL 86
Query: 67 HYT-LSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELK 125
+ + + L L+L+ N ++ + F L L + N + + F GL L
Sbjct: 87 NQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLT 146
Query: 126 TLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILD 185
LD+S NKI ++ F+D +L+ L + N++ Y FS L SL L L+ +
Sbjct: 147 KLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISH-RAFSGLNSLEQLTLEKCNLTS 205
Query: 186 VPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTL 245
+P LS+L H L L L I + D SF L L L + +
Sbjct: 206 IPTEALSHL-H-GLIVLRLRHLNINAIRDYSFK-RLYRLKVLEISHWPYLDTMTPNCLYG 262
Query: 246 RTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLI 304
L A+P + L L L+LS N S I+ L L+L +I L+
Sbjct: 263 LNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHEL--LRLQEIQLV 319
Score = 201 (75.8 bits), Expect = 7.5e-12, Sum P(2) = 7.5e-12
Identities = 86/308 (27%), Positives = 137/308 (44%)
Query: 123 ELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQ 182
E + LDL N+I +N+ F HLE L L+ N ++ E F++L +LR L L +N+
Sbjct: 72 ETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGA-FNNLFNLRTLGLRSNR 130
Query: 183 ILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXX 242
+ +P V + L +L L ++EN I +LD F L NL +L +
Sbjct: 131 LKLIPLGVFTGL--SNLTKLDISENKIVILLDYMFQ-DLYNLKSLEVGDNDLVYISHRAF 187
Query: 243 VTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
L +L +IPT+ LS L L+ L L N + I +FK L+ LK+++I+
Sbjct: 188 SGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEIS 247
Query: 303 LIPNLDSIDQXXXXXXXXXXXXXXXXXAFSLTPLGT--LKCDR-LDLSGNNFSNIDSVAF 359
P LD++ ++ L L R L+LS N S I+
Sbjct: 248 HWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSML 307
Query: 360 KSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSV 418
L L+L +I L+ L ++ AF L + ++ N L L +F NL+++
Sbjct: 308 HEL--LRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQ-LTTLEESVFHSVGNLETL 364
Query: 419 SLKGNSLS 426
L N L+
Sbjct: 365 ILDSNPLA 372
Score = 133 (51.9 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 70/308 (22%), Positives = 126/308 (40%)
Query: 150 LLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLI 209
LL L N I E F+S L L+L+ N + V +NL +L L L N +
Sbjct: 75 LLDLGKNRIKTLNQDE-FASFPHLEELELNENIVSAVEPGAFNNL--FNLRTLGLRSNRL 131
Query: 210 ETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKL 269
+ + F L+NL L + L L I + S L
Sbjct: 132 KLIPLGVFT-GLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGL 190
Query: 270 SALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQXXXXXXXXXXXXXXXXX 329
++L L L N ++I + A L L ++++ + N+++I
Sbjct: 191 NSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHL-NINAIRDYSFKRLYRLKVLEISHW 249
Query: 330 AF--SLTP--LGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFV 385
+ ++TP L L L ++ N + + +A + L L+ + ++ P + +I+
Sbjct: 250 PYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNP-ISTIEGSMLH 308
Query: 386 DNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHF-PLERISFLDLS 444
+ ++L+ + + L + F+G L+ +++ GN L+ LE S F + + L L
Sbjct: 309 ELLRLQEIQLVGGQ-LAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILD 367
Query: 445 DNPLHCDC 452
NPL CDC
Sbjct: 368 SNPLACDC 375
Score = 37 (18.1 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 6/17 (35%), Positives = 11/17 (64%)
Query: 514 CSSPPDIKGLEVKAVPE 530
C++P ++G E K P+
Sbjct: 396 CATPEFVQGKEFKDFPD 412
>UNIPROTKB|F1SJ87 [details] [associations]
symbol:LINGO1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048715 "negative regulation of oligodendrocyte
differentiation" evidence=IEA] [GO:0043491 "protein kinase B
signaling cascade" evidence=IEA] [GO:0031175 "neuron projection
development" evidence=IEA] [GO:0021954 "central nervous system
neuron development" evidence=IEA] [GO:0005154 "epidermal growth
factor receptor binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0043491
GO:GO:0031175 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GO:GO:0021954 GO:GO:0048715
GeneTree:ENSGT00690000101682 OMA:RIRDRKP EMBL:CT954219
Ensembl:ENSSSCT00000002097 Uniprot:F1SJ87
Length = 620
Score = 207 (77.9 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 79/299 (26%), Positives = 121/299 (40%)
Query: 8 IFLILALTKLNKAI-CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNV 66
+ L+L A CP RC+C Q C VP + E + + L +NRI +
Sbjct: 27 LLLVLGSVLSGSATGCPPRCECSAQDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTL 86
Query: 67 HYT-LSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELK 125
+ + + L L+L+ N ++ + F L L + N + + F GL L
Sbjct: 87 NQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLT 146
Query: 126 TLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILD 185
LD+S NKI ++ F+D +L+ L + N++ Y FS L SL L L+ +
Sbjct: 147 KLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISH-RAFSGLNSLEQLTLEKCNLTS 205
Query: 186 VPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTL 245
+P LS+L H L L L I + D SF L L L + +
Sbjct: 206 IPTEALSHL-H-GLIVLRLRHLNINAIRDYSFK-RLYRLKVLEISHWPYLDTMTPNCLYG 262
Query: 246 RTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLI 304
L A+P + L L L+LS N S I+ L L+L +I L+
Sbjct: 263 LNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHEL--LRLQEIQLV 319
Score = 134 (52.2 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 70/308 (22%), Positives = 126/308 (40%)
Query: 150 LLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLI 209
LL L N I E F+S L L+L+ N + V +NL +L L L N +
Sbjct: 75 LLDLGKNRIKTLNQDE-FASFPHLEELELNENIVSAVEPGAFNNL--FNLRTLGLRSNRL 131
Query: 210 ETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKL 269
+ + F L+NL L + L L I + S L
Sbjct: 132 KLIPLGVFT-GLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGL 190
Query: 270 SALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQXXXXXXXXXXXXXXXXX 329
++L L L N ++I + A L L ++++ + N+++I
Sbjct: 191 NSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHL-NINAIRDYSFKRLYRLKVLEISHW 249
Query: 330 AF--SLTP--LGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFV 385
+ ++TP L L L ++ N + + +A + L L+ + ++ P + +I+
Sbjct: 250 PYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNP-ISTIEGSMLH 308
Query: 386 DNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHF-PLERISFLDLS 444
+ ++L+ + + L + F+G L+ +++ GN L+ LE S F + + L L
Sbjct: 309 ELLRLQEIQLVGGQ-LAVVEPYAFRGLNYLRVLNVSGNQLTTLEESAFHSVGNLETLILD 367
Query: 445 DNPLHCDC 452
NPL CDC
Sbjct: 368 SNPLACDC 375
Score = 132 (51.5 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 71/309 (22%), Positives = 128/309 (41%)
Query: 75 ELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKI 134
E R LDL N+I L F L L ++ N +SA+ F L L+TL L N++
Sbjct: 72 ETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRL 131
Query: 135 SVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNL 194
+I F +L L +S N I D +F L +L+ L++ +N ++ + + S L
Sbjct: 132 KLIPLGVFTGLSNLTKLDISENKIVILLDY-MFQDLYNLKSLEVGDNDLVYISHRAFSGL 190
Query: 195 PHQSLHYLYLNE-NLIETVLDNSFPF-TLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXX 252
SL L L + NL S P L++LH L + + + L+
Sbjct: 191 --NSLEQLTLEKCNL------TSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLK 242
Query: 253 XXXXXXXA-IPTKQLSKLSAL--VNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDS 309
+ T + L L +L ++ N + + +A + L L+ + ++ P + +
Sbjct: 243 VLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNP-IST 301
Query: 310 IDQXXXXXXXXXXXXXXXXXAFSLT-PLGT--LKCDR-LDLSGNNFSNIDSVAFKSLFSL 365
I+ ++ P L R L++SGN + ++ AF S+ +L
Sbjct: 302 IEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESAFHSVGNL 361
Query: 366 KLVKINLIP 374
+ + ++ P
Sbjct: 362 ETLILDSNP 370
Score = 37 (18.1 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 6/17 (35%), Positives = 11/17 (64%)
Query: 514 CSSPPDIKGLEVKAVPE 530
C++P ++G E K P+
Sbjct: 396 CATPEFVQGKEFKDFPD 412
>ZFIN|ZDB-GENE-061026-3 [details] [associations]
symbol:nyx "nyctalopin" species:7955 "Danio rerio"
[GO:0007634 "optokinetic behavior" evidence=IMP] [GO:0007601
"visual perception" evidence=IMP] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 ZFIN:ZDB-GENE-061026-3 GO:GO:0007601 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR000372 SMART:SM00013 GO:GO:0007634 CTD:60506
HOGENOM:HOG000230477 HOVERGEN:HBG031762 KO:K08129 OMA:NISFITP
OrthoDB:EOG43JC4W GeneTree:ENSGT00690000101803 EMBL:BX545856
EMBL:BC163107 EMBL:BC163110 EMBL:DQ201193 IPI:IPI00508128
RefSeq:NP_001071085.1 UniGene:Dr.82636 Ensembl:ENSDART00000088569
GeneID:568821 KEGG:dre:568821 InParanoid:Q00P20 NextBio:20889357
Uniprot:Q00P20
Length = 469
Score = 198 (74.8 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 55/160 (34%), Positives = 84/160 (52%)
Query: 56 IILRENRISNVHY-TLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALS 114
+ L N+I V Y +L L+ L+L N+INV+ F+ +L N ++ N + L
Sbjct: 183 VYLERNKIEAVAYNSLLGLTSLKYLNLQENRINVIHDEAFKDLIRLENFYLNDNLLVDLP 242
Query: 115 KDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLR 174
+ FKGL LK L+L N ++ ++KT F D + LE+L L N ++Y ED F +L SL
Sbjct: 243 QQAFKGLSNLKMLNLGGNLLTNVSKTWFSDLVELEVLYLDRNRLSYIEDGS-FENLTSLI 301
Query: 175 ILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLD 214
L L++N + +P +V P + LYL N E D
Sbjct: 302 TLHLNSNNLTSLPFSVFQ--PIYFIGRLYLFRNPWECTCD 339
Score = 169 (64.5 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 81/311 (26%), Positives = 124/311 (39%)
Query: 3 YFLTCIFLILALTKLNKAICPSRCQCFDQK-LEASCTDAGLEVVPIQLNPEVQTIILREN 61
YFL L+L ++ CP C C +K C + +P + E +I L +N
Sbjct: 10 YFLLLPPHALSLWACTRS-CPPTCTCTQEKSCSVLCDHVNMMDLPKEFPCEASSINLDKN 68
Query: 62 RISNV-HYTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNE-ISALSKDTFK 119
+ + L++L L N I+ + F+ L+ L +++NE I L TF
Sbjct: 69 SLKFLSERAFGTLPSLKTLSLKYNNISFITPGAFKGLPNLVELKMAHNEYIRYLHTRTFT 128
Query: 120 GLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLD 179
LK L LDLS + + F + + L+ L+ NN + +++L + L+
Sbjct: 129 ALKRLVRLDLSDCNLFNMPDRIFLEQITLKELLCFQNNFRRVPGA--LRGMENLTHVYLE 186
Query: 180 NNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXX 239
N+I V N L L SL YL L EN I + D +F L L L
Sbjct: 187 RNKIEAVAYNSLLGLT--SLKYLNLQENRINVIHDEAFK-DLIRLENFYLNDNLLVDLPQ 243
Query: 240 XXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLV 299
L L + S L L L L N S I+ +F++L SL +
Sbjct: 244 QAFKGLSNLKMLNLGGNLLTNVSKTWFSDLVELEVLYLDRNRLSYIEDGSFENLTSLITL 303
Query: 300 KINLIPNLDSI 310
+N NL S+
Sbjct: 304 HLNS-NNLTSL 313
Score = 133 (51.9 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 37/100 (37%), Positives = 59/100 (59%)
Query: 352 SNIDSVAFKSLFSLKLVK-INLIPN-LDSIDQRAFVDNIQLETVIINENMNLKQLPSKLF 409
+ I++VA+ SL L +K +NL N ++ I AF D I+LE +N+N+ L LP + F
Sbjct: 188 NKIEAVAYNSLLGLTSLKYLNLQENRINVIHDEAFKDLIRLENFYLNDNL-LVDLPQQAF 246
Query: 410 QGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPL 448
+G +NLK ++L GN L+++ + F L + L L N L
Sbjct: 247 KGLSNLKMLNLGGNLLTNVSKTWFSDLVELEVLYLDRNRL 286
Score = 42 (19.8 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 6/21 (28%), Positives = 14/21 (66%)
Query: 508 VLNNLKCSSPPDIKGLEVKAV 528
++ ++ C+SP + GL++ V
Sbjct: 352 LVRDIPCASPSSVAGLDLSEV 372
>UNIPROTKB|F1NRZ3 [details] [associations]
symbol:RTN4R "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007409
"axonogenesis" evidence=IEA] [GO:0009986 "cell surface"
evidence=IEA] InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005783
GO:GO:0005886 GO:GO:0009986 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101803 OMA:PLWAWLQ EMBL:AADN02043142
IPI:IPI00581464 Ensembl:ENSGALT00000012536 Uniprot:F1NRZ3
Length = 483
Score = 201 (75.8 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 69/227 (30%), Positives = 108/227 (47%)
Query: 8 IFLILALTKLNKA-ICPSRCQCFDQ-KLEASCTDAGLEVVPIQLNPEVQTIILRENRISN 65
+ L+L L ++ CP C C+ + K+ SC GL +P ++ + Q I L N+I+
Sbjct: 12 LILVLCLNIQSEVESCPGACVCYSEPKITISCQQQGLTAIPTEIPIQSQRIFLHNNKITL 71
Query: 66 VHYTLSFYI--ELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYN-EISALSKDTFKGLK 122
V T SF + L + N I+++ F NKL L++S N + +++ TF+GL
Sbjct: 72 VRST-SFTSCRNMTILWIHSNNISLIEPGAFYGLNKLEELDLSDNTNLKSINPVTFRGLV 130
Query: 123 ELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQ 182
L TL L + ++ FR L+ L L NN+ D + F L +L L L N+
Sbjct: 131 HLHTLHLDRCGLMELSTGLFRGLFSLQYLYLQDNNLQNLLD-DTFIDLANLTYLFLHGNK 189
Query: 183 ILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLAL 229
I + NV L + L L L++N + V SF L + TL L
Sbjct: 190 IKSLSENVFRGLIN--LDRLLLHQNRVSLVHRRSF-HDLGKVMTLYL 233
Score = 150 (57.9 bits), Expect = 8.6e-07, Sum P(2) = 8.6e-07
Identities = 57/210 (27%), Positives = 94/210 (44%)
Query: 74 IELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYN- 132
I+ + + L NKI ++ S +F + L I N IS + F GL +L+ LDLS N
Sbjct: 57 IQSQRIFLHNNKITLVRSTSFTSCRNMTILWIHSNNISLIEPGAFYGLNKLEELDLSDNT 116
Query: 133 KISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLS 192
+ IN FR +HL L L + +F L SL+ L L +N + ++ ++
Sbjct: 117 NLKSINPVTFRGLVHLHTLHLDRCGLMELSTG-LFRGLFSLQYLYLQDNNLQNLLDDTFI 175
Query: 193 NLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXX 252
+L + L YL+L+ N I+++ +N F L NL L L L +
Sbjct: 176 DLAN--LTYLFLHGNKIKSLSENVFR-GLINLDRLLLHQNRVSLVHRRSFHDLGKVMTLY 232
Query: 253 XXXXXXXAIPTKQLSKLSALVNLDLSGNNF 282
+ + ++ L +L L L+GN +
Sbjct: 233 LFNNNLTVLTGETMAPLVSLQYLRLNGNQW 262
Score = 130 (50.8 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 49/195 (25%), Positives = 79/195 (40%)
Query: 108 NEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIF 167
N+I+ + +F + + L + N IS+I AF LE L LS N + F
Sbjct: 67 NKITLVRSTSFTSCRNMTILWIHSNNISLIEPGAFYGLNKLEELDLSDNTNLKSINPVTF 126
Query: 168 SSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTL 227
L L L LD ++++ + L SL YLYL +N ++ +LD++F L NL L
Sbjct: 127 RGLVHLHTLHLDRCGLMELSTGLFRGL--FSLQYLYLQDNNLQNLLDDTF-IDLANLTYL 183
Query: 228 ALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDS 287
L L L + + L ++ L L NN + +
Sbjct: 184 FLHGNKIKSLSENVFRGLINLDRLLLHQNRVSLVHRRSFHDLGKVMTLYLFNNNLTVLTG 243
Query: 288 VAFKSLFSLKLVKIN 302
L SL+ +++N
Sbjct: 244 ETMAPLVSLQYLRLN 258
Score = 39 (18.8 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 6/24 (25%), Positives = 14/24 (58%)
Query: 510 NNLKCSSPPDIKGLEVKAVPENSV 533
+ L+C PP + G ++K + + +
Sbjct: 283 SELECHLPPHLAGRDLKRLQSSDL 306
>UNIPROTKB|Q9HBX9 [details] [associations]
symbol:RXFP1 "Relaxin receptor 1" species:9606 "Homo
sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007188
"adenylate cyclase-modulating G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0007567 "parturition" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0030198
"extracellular matrix organization" evidence=IEA] [GO:0042562
"hormone binding" evidence=IEA] [GO:0060427 "lung connective tissue
development" evidence=IEA] [GO:0060658 "nipple morphogenesis"
evidence=IEA] [GO:0004930 "G-protein coupled receptor activity"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=TAS]
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002172
InterPro:IPR008112 InterPro:IPR017452 Pfam:PF00001 Pfam:PF00057
PRINTS:PR00237 PRINTS:PR01739 PROSITE:PS00237 PROSITE:PS50068
PROSITE:PS50262 PROSITE:PS51450 SMART:SM00192 GO:GO:0016021
GO:GO:0005886 Reactome:REACT_111102 GO:GO:0030154 GO:GO:0046872
GO:GO:0004930 GO:GO:0007189 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 GO:GO:0030198 GO:GO:0042562 EMBL:CH471056
Gene3D:4.10.400.10 InterPro:IPR023415 SUPFAM:SSF57424
PROSITE:PS01209 GO:GO:0007567 InterPro:IPR000372 SMART:SM00013
GO:GO:0060427 EMBL:AF190500 EMBL:AY899848 EMBL:AY899849
EMBL:AY899850 EMBL:AK300379 EMBL:BC112142 EMBL:BC113617
IPI:IPI00012456 IPI:IPI00219888 IPI:IPI00654878 IPI:IPI00876893
RefSeq:NP_001240657.1 RefSeq:NP_001240658.1 RefSeq:NP_067647.2
UniGene:Hs.591686 PDB:2JM4 PDBsum:2JM4 ProteinModelPortal:Q9HBX9
SMR:Q9HBX9 MINT:MINT-231156 STRING:Q9HBX9 PhosphoSite:Q9HBX9
DMDM:166209887 PRIDE:Q9HBX9 DNASU:59350 Ensembl:ENST00000307765
Ensembl:ENST00000343542 Ensembl:ENST00000423548
Ensembl:ENST00000470033 Ensembl:ENST00000471616 GeneID:59350
KEGG:hsa:59350 UCSC:uc003ipz.3 UCSC:uc010iqm.3 UCSC:uc010iqo.3
CTD:59350 GeneCards:GC04P159236 H-InvDB:HIX0024561 HGNC:HGNC:19718
HPA:HPA027067 MIM:606654 neXtProt:NX_Q9HBX9 PharmGKB:PA134868312
HOVERGEN:HBG026354 InParanoid:Q9HBX9 KO:K04306 OMA:YTLTTRP
PhylomeDB:Q9HBX9 ChEMBL:CHEMBL1293316 EvolutionaryTrace:Q9HBX9
GenomeRNAi:59350 NextBio:65261 ArrayExpress:Q9HBX9 Bgee:Q9HBX9
CleanEx:HS_RXFP1 Genevestigator:Q9HBX9 GermOnline:ENSG00000171509
GO:GO:0060658 Uniprot:Q9HBX9
Length = 757
Score = 200 (75.5 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 75/271 (27%), Positives = 112/271 (41%)
Query: 27 QCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYT-LSFYIELRSLDLSVNK 85
QC Q LE C + L VP ++ V + L+ N I + Y +L+ L L NK
Sbjct: 103 QCLCQGLELDCDETNLRAVP-SVSSNVTAMSLQWNLIRKLPPDCFKNYHDLQKLYLQNNK 161
Query: 86 INVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDT 145
I + + F N L L +S+N I+ L F+ L L+ L + N +S I+ F
Sbjct: 162 ITSISIYAFRGLNSLTKLYLSHNRITFLKPGVFEDLHRLEWLIIEDNHLSRISPPTFYGL 221
Query: 146 LHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLN 205
L LL+L N +T D + + L L L+ N I ++ N L+ + +L L +
Sbjct: 222 NSLILLVLMNNVLTRLPDKPLCQHMPRLHWLDLEGNHIHNLRN--LTFISCSNLTVLVMR 279
Query: 206 ENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQ 265
+N I + +N+F L L L L L+ L I Q
Sbjct: 280 KNKINHLNENTFA-PLQKLDELDLGSNKIENLPPLIFKDLKELSQLNLSYNPIQKIQANQ 338
Query: 266 LSKLSALVNLDLSGNNFSNIDSVAFKSLFSL 296
L L +L L G SNI F+ L +L
Sbjct: 339 FDYLVKLKSLSLEGIEISNIQQRMFRPLMNL 369
Score = 148 (57.2 bits), Expect = 8.7e-07, P = 8.7e-07
Identities = 52/203 (25%), Positives = 81/203 (39%)
Query: 103 LNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFE 162
+++ +N I L D FK +L+ L L NKI+ I+ AFR L L LS N IT+ +
Sbjct: 131 MSLQWNLIRKLPPDCFKNYHDLQKLYLQNNKITSISIYAFRGLNSLTKLYLSHNRITFLK 190
Query: 163 DSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLT 222
+F L L L +++N + + L SL L L N++ + D +
Sbjct: 191 PG-VFEDLHRLEWLIIEDNHLSRISPPTFYGL--NSLILLVLMNNVLTRLPDKPLCQHMP 247
Query: 223 NLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNF 282
LH L L ++ L + + L L LDL N
Sbjct: 248 RLHWLDLEGNHIHNLRNLTFISCSNLTVLVMRKNKINHLNENTFAPLQKLDELDLGSNKI 307
Query: 283 SNIDSVAFKSLFSLKLVKINLIP 305
N+ + FK L L + ++ P
Sbjct: 308 ENLPPLIFKDLKELSQLNLSYNP 330
>WB|WBGene00002282 [details] [associations]
symbol:let-4 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0002064
"epithelial cell development" evidence=IMP] [GO:0035150 "regulation
of tube size" evidence=IMP] [GO:0045177 "apical part of cell"
evidence=IDA] InterPro:IPR001611 PROSITE:PS51450 GO:GO:0009792
GO:GO:0006898 GO:GO:0040010 GO:GO:0002119 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 GO:GO:0045177 GO:GO:0040011
GO:GO:0040018 GO:GO:0002064 GeneTree:ENSGT00700000104286
GO:GO:0035150 EMBL:Z79598 EMBL:JQ292907 RefSeq:NP_510425.2
ProteinModelPortal:Q93373 SMR:Q93373 STRING:Q93373
EnsemblMetazoa:C44H4.2 GeneID:181554 KEGG:cel:CELE_C44H4.2
CTD:181554 WormBase:C44H4.2 HOGENOM:HOG000018354 OMA:PLVCTEN
Uniprot:Q93373
Length = 773
Score = 200 (75.5 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 89/342 (26%), Positives = 138/342 (40%)
Query: 49 LNPEVQTIILRENRISNVHYT-LSFYIELRSLDLSVNKI-NVLGSHNFEYQNKLLNLNIS 106
+NP ++ ++L N I V L+ L LDLS N I + F NKL ++N+
Sbjct: 108 INPVLEEVVLNHNLIEKVPAAALAGLPNLLRLDLSNNSIVEIQEQEIFPNLNKLYDINLG 167
Query: 107 YNEISALSKDTFKGLKE-LKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSE 165
N+I ++ TF+ +K ++T++L +N ++ + +A R L+ L L N I D+
Sbjct: 168 SNKIFSIHTSTFQNVKNSIQTINLGHNNMTAVPSSAIRGLKQLQSLHLHKNRIEQL-DAL 226
Query: 166 IFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLH 225
F +L L +L L NQI ++ N+P SL YLYL+ N I + F T L
Sbjct: 227 NFLNLPVLNLLNLAGNQIHELNRQAFLNVP--SLRYLYLSGNKITKLTAYQFQ-TFEQLE 283
Query: 226 TLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNI 285
L L L+ L I + + S++V L LS N +
Sbjct: 284 MLDLTNNEIGAIPANSLSGLKQLRQLYLAHNKISNISSNAFTN-SSIVVLVLSSNELKTL 342
Query: 286 DSVAFKSLFSLKLVKI--NLIPNLDSIDQXXXXXXXXXXXXXXXXXAFSLTP-LGTLKCD 342
+ L +L+ V N I ++ + T L L
Sbjct: 343 TAGIISGLPNLQQVSFRDNQIKTINRNAFYDAASLVMLDLAKNQLTEIAPTTFLAQLNLL 402
Query: 343 RLDLSGNNFSNIDSVAFKSLFSLKLVKIN-LI--PNLDSIDQ 381
+DLS N AF S L+K N L+ NL + Q
Sbjct: 403 LVDLSENKLPKTPYSAFNSRVGTVLLKENPLVCTENLHMLQQ 444
Score = 176 (67.0 bits), Expect = 8.0e-10, P = 8.0e-10
Identities = 82/359 (22%), Positives = 146/359 (40%)
Query: 103 LNISYNEISALSKDTFKGLKE-LKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYF 161
L++S N+I + F G+ L+ + L++N I + A +L L LS N+I
Sbjct: 90 LDLSQNKIKKIDDAAFAGINPVLEEVVLNHNLIEKVPAAALAGLPNLLRLDLSNNSIVEI 149
Query: 162 EDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTL 221
++ EIF +L L + L +N+I + + N+ + S+ + L N + T + +S L
Sbjct: 150 QEQEIFPNLNKLYDINLGSNKIFSIHTSTFQNVKN-SIQTINLGHNNM-TAVPSSAIRGL 207
Query: 222 TNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNN 281
L +L L + L L+ + + + +L L LSGN
Sbjct: 208 KQLQSLHLHKNRIEQLDALNFLNLPVLNLLNLAGNQIHELNRQAFLNVPSLRYLYLSGNK 267
Query: 282 FSNIDSVAFKSLFSLKLV-----KINLIP--NLDSIDQXXXXXXXXXXXXXXXXXAFSLT 334
+ + + F++ L+++ +I IP +L + Q AF+ +
Sbjct: 268 ITKLTAYQFQTFEQLEMLDLTNNEIGAIPANSLSGLKQLRQLYLAHNKISNISSNAFTNS 327
Query: 335 PLGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFVDNIQLETVI 394
+ L LS N + + L +L+ V + +I++ AF D L +
Sbjct: 328 SIVVLV-----LSSNELKTLTAGIISGLPNLQQVSFR-DNQIKTINRNAFYDAASLVMLD 381
Query: 395 INENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFPLERISFLDLSDNPLHCDCN 453
+ +N L ++ F NL V L N L S F R+ + L +NPL C N
Sbjct: 382 LAKNQ-LTEIAPTTFLAQLNLLLVDLSENKLPKTPYSAFN-SRVGTVLLKENPLVCTEN 438
Score = 168 (64.2 bits), Expect = 6.0e-09, P = 6.0e-09
Identities = 94/363 (25%), Positives = 152/363 (41%)
Query: 102 NLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLH-LELLILSFNNITY 160
+L ++ E+ L + F GL ++ LDLS NKI I+ AF LE ++L+ N I
Sbjct: 66 SLTMNQAELVELPPNFFSGLF-IRRLDLSQNKIKKIDDAAFAGINPVLEEVVLNHNLIEK 124
Query: 161 FEDSEIFSSLKSLRILKLDNNQILDVPNN-VLSNLPHQSLHYLYLNENLIETVLDNSFPF 219
+ + + L +L L L NN I+++ + NL L+ + L N I ++ ++F
Sbjct: 125 VPAAAL-AGLPNLLRLDLSNNSIVEIQEQEIFPNL--NKLYDINLGSNKIFSIHTSTFQN 181
Query: 220 TLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSG 279
++ T+ L L+ L + L L L+L+G
Sbjct: 182 VKNSIQTINLGHNNMTAVPSSAIRGLKQLQSLHLHKNRIEQLDALNFLNLPVLNLLNLAG 241
Query: 280 NNFSNIDSVAFKSLFSLKLVKI--NLIPNLDSIDQXXXXXXXXXXXXXXXXXAFSLTPLG 337
N ++ AF ++ SL+ + + N I L + A L
Sbjct: 242 NQIHELNRQAFLNVPSLRYLYLSGNKITKLTAYQFQTFEQLEMLDLTNNEIGAIPANSLS 301
Query: 338 TLKCDR-LDLSGNNFSNIDSVAFKS-------LFS--LKLVKINLIPNLDSIDQRAFVDN 387
LK R L L+ N SNI S AF + L S LK + +I L ++ Q +F DN
Sbjct: 302 GLKQLRQLYLAHNKISNISSNAFTNSSIVVLVLSSNELKTLTAGIISGLPNLQQVSFRDN 361
Query: 388 IQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFPLERISFL--DLSD 445
Q++T IN N F +L + L N L+ + + F L +++ L DLS+
Sbjct: 362 -QIKT--INRNA---------FYDAASLVMLDLAKNQLTEIAPTTF-LAQLNLLLVDLSE 408
Query: 446 NPL 448
N L
Sbjct: 409 NKL 411
>FB|FBgn0028888 [details] [associations]
symbol:CG4168 species:7227 "Drosophila melanogaster"
[GO:0004930 "G-protein coupled receptor activity" evidence=ISS]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 EMBL:AE014134
InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875 Pfam:PF12799
HSSP:Q9BZR6 FlyBase:FBgn0028888 RefSeq:NP_609740.4
ProteinModelPortal:Q9VJQ0 SMR:Q9VJQ0 IntAct:Q9VJQ0 MINT:MINT-294601
GeneID:34889 KEGG:dme:Dmel_CG4168 UCSC:CG4168-RA InParanoid:Q9VJQ0
PhylomeDB:Q9VJQ0 GenomeRNAi:34889 NextBio:790724
ArrayExpress:Q9VJQ0 Bgee:Q9VJQ0 Uniprot:Q9VJQ0
Length = 1443
Score = 213 (80.0 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 101/403 (25%), Positives = 178/403 (44%)
Query: 52 EVQTIILRENRISNVHYTLSFYIELRSLDLSVNKINVLGSHNFEYQN---------KLLN 102
++Q I L N I+ +H+ L F R+L + V + + E + +L+
Sbjct: 647 QIQEISLSFNDIT-IHHPLVFENVSRTLKILELSFAVFPARSLESLDPLDALLPLSQLIW 705
Query: 103 LNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLEL--LILSFNNITY 160
L + N + +S ++F ++EL ++LS+N++ + + F+ H L + LS+N +
Sbjct: 706 LGLDNNNLKQVSNESFAQMRELSYINLSFNQLKTLPRGLFQSDAHSHLVEIDLSYNGLER 765
Query: 161 FEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFT 220
E ++ F SL L+ L L +N++ + + NL + L YL L+ N + + +F
Sbjct: 766 LE-AQTFHSLGDLQTLNLQSNRLRTIARHAFHNL--EFLRYLDLSYNRLVNISHGAFT-V 821
Query: 221 LTNLHTLALXXXX--XXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLS 278
L NL L L V+ T A +LS + LD+S
Sbjct: 822 LPNLAALDLMHNQLCSLSLKSFLYVSNTTTPLRLNVSHNHIASFYDELSSYMYIYQLDIS 881
Query: 279 GNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQXXXXXXXXXXXXXXXXXAFSLTPL- 336
N+ + DS F +L + L +NL N L S+ +LT L
Sbjct: 882 HNHVTKSDS--FTNLANT-LRFLNLAHNQLGSLQSHAFGDLEFLEILNVAHN--NLTSLR 936
Query: 337 -----GTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFVDNIQLE 391
G LDLS N + F +L L++++IN L ++ + F+ N +LE
Sbjct: 937 RRSFQGLNSLQELDLSHNQLDQLQVEQFSNLRKLRILRINS-NRLRALPREVFM-NTRLE 994
Query: 392 TVIINEN-MNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHF 433
+ I EN +++ +P+ G T L+S+ + N+L +L+AS F
Sbjct: 995 FLDIAENQLSVWPVPAFTDIGFT-LRSIQMSHNNLEYLDASMF 1036
Score = 174 (66.3 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 90/388 (23%), Positives = 162/388 (41%)
Query: 76 LRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKIS 135
L +DLS N + L + F L LN+ N + +++ F L+ L+ LDLSYN++
Sbjct: 753 LVEIDLSYNGLERLEAQTFHSLGDLQTLNLQSNRLRTIARHAFHNLEFLRYLDLSYNRLV 812
Query: 136 VINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQI-LDVPNNVLSNL 194
I+ AF +L L L N + SLKS + + L+V +N +++
Sbjct: 813 NISHGAFTVLPNLAALDLMHNQLCSL-------SLKSFLYVSNTTTPLRLNVSHNHIASF 865
Query: 195 PHQSLHYLYLNE-NLIETVLDNSFPFT-LTN-LHTLALXXXXXXXXXXXXXVTLRTLHXX 251
+ Y+Y+ + ++ + S FT L N L L L L L
Sbjct: 866 YDELSSYMYIYQLDISHNHVTKSDSFTNLANTLRFLNLAHNQLGSLQSHAFGDLEFLEIL 925
Query: 252 XXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN-----LIPN 306
++ + L++L LDLS N + F +L L++++IN +P
Sbjct: 926 NVAHNNLTSLRRRSFQGLNSLQELDLSHNQLDQLQVEQFSNLRKLRILRINSNRLRALPR 985
Query: 307 LDSIDQXXXXXXXXXXXXXXXXXAFSLTPLG-TLKCDRLDLSGNNFSNIDSVAF---KSL 362
+ + T +G TL+ + +S NN +D+ F + L
Sbjct: 986 -EVFMNTRLEFLDIAENQLSVWPVPAFTDIGFTLRS--IQMSHNNLEYLDASMFINSQFL 1042
Query: 363 FSLKLVK--INLIPNLDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSL 420
+ + L + I ++P+ + +F++N L + +++N + ++F L+ +SL
Sbjct: 1043 YDISLARNRITILPD----NTFSFLNN--LTNLDLSQNPLVTTNLREVFVHTPRLRKLSL 1096
Query: 421 KGNSLSHLEASHFPLERISFLDLSDNPL 448
L L PL +S+LD+S N L
Sbjct: 1097 HHMGLYVLPPLKLPL--LSYLDVSGNYL 1122
Score = 173 (66.0 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 79/359 (22%), Positives = 150/359 (41%)
Query: 75 ELRSLDLSVNKINVL--GSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYN 132
EL ++LS N++ L G + + L+ +++SYN + L TF L +L+TL+L N
Sbjct: 726 ELSYINLSFNQLKTLPRGLFQSDAHSHLVEIDLSYNGLERLEAQTFHSLGDLQTLNLQSN 785
Query: 133 KISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLS 192
++ I + AF + L L LS+N + F+ L +L L L +NQ+ +
Sbjct: 786 RLRTIARHAFHNLEFLRYLDLSYNRLVNISHGA-FTVLPNLAALDLMHNQLCSLSLKSFL 844
Query: 193 NLPHQSLHY-LYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXX 251
+ + + L ++ N I + D + ++ L + + TL
Sbjct: 845 YVSNTTTPLRLNVSHNHIASFYDELSSYMY--IYQLDISHNHVTKSDSFTNLA-NTLRFL 901
Query: 252 XXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSI 310
++ + L L L+++ NN +++ +F+ L SL+ +++L N LD +
Sbjct: 902 NLAHNQLGSLQSHAFGDLEFLEILNVAHNNLTSLRRRSFQGLNSLQ--ELDLSHNQLDQL 959
Query: 311 DQXXXXXXXXXXXXXXXXXAFSLTPLGTLKCDRL---DLSGNNFSNIDSVAFKSL-FSLK 366
P RL D++ N S AF + F+L+
Sbjct: 960 QVEQFSNLRKLRILRINSNRLRALPREVFMNTRLEFLDIAENQLSVWPVPAFTDIGFTLR 1019
Query: 367 LVKINLIPNLDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSL 425
++++ NL+ +D F+++ L + + N + LP F NL ++ L N L
Sbjct: 1020 SIQMSH-NNLEYLDASMFINSQFLYDISLARN-RITILPDNTFSFLNNLTNLDLSQNPL 1076
Score = 150 (57.9 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 99/415 (23%), Positives = 181/415 (43%)
Query: 52 EVQTIILRENRISNVHYTLSFYIE-LRSLDLSVNK-INVLGSHN-FEYQNKLLNLNISYN 108
++QT+ L+ NR+ + +E LR LDLS N+ +N+ SH F L L++ +N
Sbjct: 776 DLQTLNLQSNRLRTIARHAFHNLEFLRYLDLSYNRLVNI--SHGAFTVLPNLAALDLMHN 833
Query: 109 EISALSKDTFKGLKELKT---LDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSE 165
++ +LS +F + T L++S+N I+ +++ L +S N++T S+
Sbjct: 834 QLCSLSLKSFLYVSNTTTPLRLNVSHNHIASFYDE-LSSYMYIYQLDISHNHVT---KSD 889
Query: 166 IFSSL-KSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNL 224
F++L +LR L L +NQ+ + ++ +L + L L + N + ++ SF L +L
Sbjct: 890 SFTNLANTLRFLNLAHNQLGSLQSHAFGDL--EFLEILNVAHNNLTSLRRRSFQ-GLNSL 946
Query: 225 HTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSN 284
L L LR L A+P +++ + L LD++ N S
Sbjct: 947 QELDLSHNQLDQLQVEQFSNLRKLRILRINSNRLRALP-REVFMNTRLEFLDIAENQLSV 1005
Query: 285 IDSVAFKSL-FSLKLVKINLIPNLDSIDQXXXXXXXXXXXXXXXXXAFSLTPLGTLK--- 340
AF + F+L+ ++++ NL+ +D ++ P T
Sbjct: 1006 WPVPAFTDIGFTLRSIQMSH-NNLEYLDASMFINSQFLYDISLARNRITILPDNTFSFLN 1064
Query: 341 -CDRLDLSGNNF--SNIDSVAFKS--LFSLKLVKINL--IPNLDSIDQRAFVD---NIQL 390
LDLS N +N+ V + L L L + L +P L + +++D N
Sbjct: 1065 NLTNLDLSQNPLVTTNLREVFVHTPRLRKLSLHHMGLYVLPPL-KLPLLSYLDVSGNYLQ 1123
Query: 391 ETVIINENMNLKQLP-SKLFQGNTNLKSVSLKGNSLSHLEASHFPLERISFLDLS 444
E + +L+ + S N + + L S+ L+ +H PL RI+ DL+
Sbjct: 1124 ELSPLGSLRHLRHVNVSHNKLTNASCAAEHLPP-SVRVLDLAHNPLRRITLHDLA 1177
Score = 150 (57.9 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 112/468 (23%), Positives = 196/468 (41%)
Query: 10 LILALTKLNKAICPSRCQCFDQKLEASCTDAG-LEVVPIQLNP--EVQTIILRENRISNV 66
L+LA +++ + PS + + LE + L VP+ L+ ++ + L N+IS +
Sbjct: 505 LVLAFNAISR-VHPSAFEGLTETLEYLDLERNRLTTVPVALSSLHHLKYLYLTSNQISQL 563
Query: 67 HYTLSFYIELRSLDLSVNK---INVLGSHNFEYQNKLLNLNISYNEISALSKDTFK---- 119
+ SF LR L LS N I VLG N+ +L LN+ YN I+ + + F
Sbjct: 564 NNLPSFTENLRVLSLSGNNFSMIPVLGLKNY---TQLSYLNMGYNSITDIPEGIFAVDSW 620
Query: 120 GLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSL-KSLRILKL 178
G L+T+ L NKI+ ++ +F ++ + LSFN+IT +F ++ ++L+IL+L
Sbjct: 621 G-SNLQTILLRNNKITHLHLGSFAGLEQIQEISLSFNDITIHHPL-VFENVSRTLKILEL 678
Query: 179 D-------NNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXX 231
+ + LD P + L LP L +L L+ N ++ V + SF + L + L
Sbjct: 679 SFAVFPARSLESLD-PLDAL--LPLSQLIWLGLDNNNLKQVSNESFA-QMRELSYINLSF 734
Query: 232 XXXXXXXXXXXVTLRTLHXXXXXXXXXXA--IPTKQLSKLSALVNLDLSGNNFSNIDSVA 289
+ H + + L L L+L N I A
Sbjct: 735 NQLKTLPRGLFQSDAHSHLVEIDLSYNGLERLEAQTFHSLGDLQTLNLQSNRLRTIARHA 794
Query: 290 FKSLFSLKLVKI--NLIPNLDSIDQXXXXXXXXXXXXXXXXXAFSLTPL----GTLKCDR 343
F +L L+ + + N + N+ + SL T R
Sbjct: 795 FHNLEFLRYLDLSYNRLVNISHGAFTVLPNLAALDLMHNQLCSLSLKSFLYVSNTTTPLR 854
Query: 344 LDLSGNNFSNI-DSVA-FKSLFSLKLVKINLIPNLDSIDQRAFVDNIQLETVIINENMNL 401
L++S N+ ++ D ++ + ++ L + N + DS A + ++ + N+ L
Sbjct: 855 LNVSHNHIASFYDELSSYMYIYQLD-ISHNHVTKSDSFTNLA--NTLRFLNLAHNQ---L 908
Query: 402 KQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP-LERISFLDLSDNPL 448
L S F L+ +++ N+L+ L F L + LDLS N L
Sbjct: 909 GSLQSHAFGDLEFLEILNVAHNNLTSLRRRSFQGLNSLQELDLSHNQL 956
Score = 146 (56.5 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 80/368 (21%), Positives = 152/368 (41%)
Query: 92 HNFEYQNKLLN-LNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLH-LE 149
H FE+ + + + +S + ++ +TF+GL+ LKTL L N++ I++ +F H L
Sbjct: 203 HRFEFMHSSVRYIEMSNTHLQSVDDETFQGLR-LKTLKLIDNELQDISERSFSTMTHSLM 261
Query: 150 LLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLI 209
L +S N + + + L SL L N I + N + H +L L+L++N I
Sbjct: 262 TLDISGNKMQHLP-LDALQRLHSLSRLVAQRNHITTLDGNW--DAQHDTLRSLHLSDNDI 318
Query: 210 ETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLH--XXXXXXXXXXAIPTKQLS 267
V + + + + T +++ P +QL
Sbjct: 319 TEVAPGGGSIEVVSQNDNS-SQPSSLAAVQTRLETSNSIYPPSPSSGDRTTGGRPFEQLQ 377
Query: 268 KLSALVNLDLSGNNFSNI-DSVAFKSLFSLKLVK--INLIPN--LDSIDQXXXXXXXXXX 322
KL + LDLS N ++ + +SL ++ L + + P + + +
Sbjct: 378 KL---LWLDLSNNRIYHVAGNYLPRSLVTMDLSSNLLTVFPQQLFEQLPELRIVSLRDNL 434
Query: 323 XXXXXXXAFSLTPLGTLKCDRLDLSGNNFSNIDSVAFKSLFS-LKLVKINLIPNLDSIDQ 381
+ PL + +RLDL N N++S F+ +S + L +NL N +
Sbjct: 435 IRSVQWKELQVRPL-RMHLERLDLGQNCIENLESDYFQQNYSDVHLRALNLEQNFVTQLP 493
Query: 382 RAFVDNIQLETVIINENMNLKQLPSKLFQGNTN-LKSVSLKGNSLSHLEASHFPLERISF 440
A + +++ N + PS F+G T L+ + L+ N L+ + + L + +
Sbjct: 494 EAVFKATGIAHLVLAFNAISRVHPSA-FEGLTETLEYLDLERNRLTTVPVALSSLHHLKY 552
Query: 441 LDLSDNPL 448
L L+ N +
Sbjct: 553 LYLTSNQI 560
Score = 40 (19.1 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 6/9 (66%), Positives = 7/9 (77%)
Query: 444 SDNPLHCDC 452
S NPL C+C
Sbjct: 1343 SHNPLECEC 1351
>UNIPROTKB|E2RGS8 [details] [associations]
symbol:LGR6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016500 "protein-hormone receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002131 Pfam:PF00001 PRINTS:PR00373 PROSITE:PS51450
GO:GO:0016021 InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0016500
GeneTree:ENSGT00650000092962 CTD:59352 KO:K08399 OMA:AYGKAPS
EMBL:AAEX03004986 EMBL:AAEX03004981 EMBL:AAEX03004982
EMBL:AAEX03004983 EMBL:AAEX03004984 EMBL:AAEX03004985
RefSeq:XP_848875.1 Ensembl:ENSCAFT00000016729 GeneID:490231
KEGG:cfa:490231 NextBio:20863298 Uniprot:E2RGS8
Length = 965
Score = 201 (75.8 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 76/284 (26%), Positives = 121/284 (42%)
Query: 22 CPSRCQCFDQ--KLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSFYIE-LRS 78
CP+ C+C + L A C++ GL VP L+P + L N ++ + L ++ L
Sbjct: 33 CPAPCRCQEDGIMLSADCSELGLSAVPRDLDPLTAYLDLSMNNLTELQPGLFHHLRFLEE 92
Query: 79 LDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVIN 138
L LS N ++ + H F L L + N++ + D L L++L L N IS++
Sbjct: 93 LRLSGNHLSHIPGHAFSGLYSLKILMLQNNQLGGVPADALWELPSLQSLRLDANLISLVP 152
Query: 139 KTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQS 198
+ +F L L L N +T + ++L +L+ + L N+I +P+ NL S
Sbjct: 153 ERSFEGLSSLRHLWLDDNALTEIPVRAL-NNLPALQAMTLALNRISHIPDYAFQNLT--S 209
Query: 199 LHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXX 258
L L+L+ N I+ + +SF L NL TL L TL L
Sbjct: 210 LVVLHLHNNRIQHLGTHSFE-GLHNLETLDLNYNELQEFPVAIR-TLGRLQELGFHNNNI 267
Query: 259 XAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
AIP K L + N + AF+ L L + +N
Sbjct: 268 KAIPEKAFMGNPLLQTIHFYDNPIQCVGRSAFQDLPKLHTLSLN 311
Score = 151 (58.2 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 80/273 (29%), Positives = 111/273 (40%)
Query: 39 DAGLEVVPIQ-LN--PEVQTIILRENRISNV-HYTLSFYIELRSLDLSVNKINVLGSHNF 94
D L +P++ LN P +Q + L NRIS++ Y L L L N+I LG+H+F
Sbjct: 169 DNALTEIPVRALNNLPALQAMTLALNRISHIPDYAFQNLTSLVVLHLHNNRIQHLGTHSF 228
Query: 95 EYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILS 154
E + L L+++YNE+ + L L+ L N I I + AF L+ +
Sbjct: 229 EGLHNLETLDLNYNELQEFPV-AIRTLGRLQELGFHNNNIKAIPEKAFMGNPLLQTIHFY 287
Query: 155 FNNITYFEDSEIFSSLKSLRILKLDN-NQILDVPNNVLSNLPHQSLHYLYLNENLIETVL 213
N I S F L L L L+ I + P+ L SL L L I +L
Sbjct: 288 DNPIQCVGRSA-FQDLPKLHTLSLNGATDIQEFPD--LKGTT--SLEILTLTRAGIR-LL 341
Query: 214 DNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALV 273
L L L L + L AI S+LS+L
Sbjct: 342 PPGMCQQLPRLRVLELSHNQIEELPSLHRC--QKLEEIGLQHNRIGAIGADTFSQLSSLR 399
Query: 274 NLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN 306
LDLS N +I AF +L SL VK++L N
Sbjct: 400 ALDLSWNAIRSIHPEAFVTLRSL--VKLDLTDN 430
Score = 138 (53.6 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 81/324 (25%), Positives = 125/324 (38%)
Query: 51 PEVQTIILRENRISNV-HYTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNE 109
P +Q++ L N IS V + LR L L N + + L + ++ N
Sbjct: 136 PSLQSLRLDANLISLVPERSFEGLSSLRHLWLDDNALTEIPVRALNNLPALQAMTLALNR 195
Query: 110 ISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSS 169
IS + F+ L L L L N+I + +F +LE L L++N + F + +
Sbjct: 196 ISHIPDYAFQNLTSLVVLHLHNNRIQHLGTHSFEGLHNLETLDLNYNELQEFPVA--IRT 253
Query: 170 LKSLRILKLDNNQILDVPNNVLSNLPH-QSLHYLYLNENLIETVLDNSFPFTLTNLHTLA 228
L L+ L NN I +P P Q++H+ Y +N I+ V ++F L LHTL+
Sbjct: 254 LGRLQELGFHNNNIKAIPEKAFMGNPLLQTIHF-Y--DNPIQCVGRSAFQ-DLPKLHTLS 309
Query: 229 LXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSV 288
L T +L +P +L L L+LS N + S+
Sbjct: 310 LNGATDIQEFPDLKGTT-SLEILTLTRAGIRLLPPGMCQQLPRLRVLELSHNQIEELPSL 368
Query: 289 AFKSLFSLKLVKINLIPN-LDSIDQXXXXXXXXXXXXXXXXXAF-SLTPLG--TLKC-DR 343
KL +I L N + +I A S+ P TL+ +
Sbjct: 369 HRCQ----KLEEIGLQHNRIGAIGADTFSQLSSLRALDLSWNAIRSIHPEAFVTLRSLVK 424
Query: 344 LDLSGNNFSNIDSVAFKSLFSLKL 367
LDL+ N S + L LKL
Sbjct: 425 LDLTDNQLSTLPLAGLGGLMHLKL 448
Score = 127 (49.8 bits), Expect = 0.00023, P = 0.00023
Identities = 66/243 (27%), Positives = 105/243 (43%)
Query: 58 LRENRISNVHYTLSF--YIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSK 115
L NRI ++ T SF L +LDL+ N++ +L L N I A+ +
Sbjct: 215 LHNNRIQHLG-THSFEGLHNLETLDLNYNELQEFPVA-IRTLGRLQELGFHNNNIKAIPE 272
Query: 116 DTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILS-FNNITYFEDSEIFSSLKSL- 173
F G L+T+ N I + ++AF+D L L L+ +I F D + +SL+ L
Sbjct: 273 KAFMGNPLLQTIHFYDNPIQCVGRSAFQDLPKLHTLSLNGATDIQEFPDLKGTTSLEILT 332
Query: 174 ------RIL------KLDNNQILDVPNNVLSNLP--H--QSLHYLYLNENLIETVLDNSF 217
R+L +L ++L++ +N + LP H Q L + L N I + ++F
Sbjct: 333 LTRAGIRLLPPGMCQQLPRLRVLELSHNQIEELPSLHRCQKLEEIGLQHNRIGAIGADTF 392
Query: 218 PFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDL 277
L++L L L VTLR+L +P L+ L L++L L
Sbjct: 393 S-QLSSLRALDLSWNAIRSIHPEAFVTLRSLVKLDLTDNQLSTLP---LAGLGGLMHLKL 448
Query: 278 SGN 280
GN
Sbjct: 449 RGN 451
Score = 123 (48.4 bits), Expect = 0.00061, P = 0.00061
Identities = 41/146 (28%), Positives = 73/146 (50%)
Query: 38 TDAGLEVVP---IQLNPEVQTIILRENRISNVHYTLSFYIELRSLDLSVNKINVLGSHNF 94
T AG+ ++P Q P ++ + L N+I + +L +L + L N+I +G+ F
Sbjct: 334 TRAGIRLLPPGMCQQLPRLRVLELSHNQIEELP-SLHRCQKLEEIGLQHNRIGAIGADTF 392
Query: 95 EYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILS 154
+ L L++S+N I ++ + F L+ L LDL+ N++S + +HL+L
Sbjct: 393 SQLSSLRALDLSWNAIRSIHPEAFVTLRSLVKLDLTDNQLSTLPLAGLGGLMHLKLR--- 449
Query: 155 FNNITYFEDSEIFS--SLKSLRILKL 178
N+ S+ FS S LRIL++
Sbjct: 450 -GNLAL---SQAFSKDSFPKLRILEV 471
>MGI|MGI:1919006 [details] [associations]
symbol:Cpn2 "carboxypeptidase N, polypeptide 2"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 MGI:MGI:1919006 GO:GO:0005576 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
CTD:1370 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 HOGENOM:HOG000294123
HOVERGEN:HBG050814 KO:K13023 OMA:WQCDCHL OrthoDB:EOG4WM4TF
EMBL:AK005049 EMBL:BC025836 EMBL:BC138287 EMBL:BC138288
IPI:IPI00119522 RefSeq:NP_082180.2 UniGene:Mm.290614
ProteinModelPortal:Q9DBB9 SMR:Q9DBB9 STRING:Q9DBB9 PaxDb:Q9DBB9
PRIDE:Q9DBB9 Ensembl:ENSMUST00000064856 GeneID:71756 KEGG:mmu:71756
UCSC:uc007ywm.1 GeneTree:ENSGT00700000104286 InParanoid:B2RR89
NextBio:334421 Bgee:Q9DBB9 CleanEx:MM_CPN2 Genevestigator:Q9DBB9
GermOnline:ENSMUSG00000023176 Uniprot:Q9DBB9
Length = 547
Score = 197 (74.4 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 67/251 (26%), Positives = 113/251 (45%)
Query: 53 VQTIILRENRISNVHYTLSFYIE-LRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEIS 111
++ + L +R++ + L +++ L SL L N++ L F+ L LN++ N ++
Sbjct: 123 LEKLTLDFDRLAGLPEDLFCHMDILESLQLQGNQLRTLPGRLFQSLRDLRTLNLAQNLLT 182
Query: 112 ALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLK 171
L K F+ L L+ L LS N ++ + + A L+ L L N IT +FS L
Sbjct: 183 QLPKGAFQSLTGLQMLKLSNNMLARLPEGALGSLSSLQELFLDGNAITELSP-HLFSQLF 241
Query: 172 SLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXX 231
SL +L L +N I +P ++ S+L H +L +L L +N + T+ + F LH L+L
Sbjct: 242 SLEMLWLQHNAICHLPVSLFSSL-H-NLTFLSLKDNALRTLPEGLFAHNQGLLH-LSLSY 298
Query: 232 XXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFK 291
L L +P L LV L L NN + + F
Sbjct: 299 NQLETIPEGAFTNLSRLVSLTLSHNAITDLPEHVFRNLEQLVKLSLDSNNLTALHPALFH 358
Query: 292 SLFSLKLVKIN 302
+L L+L+ ++
Sbjct: 359 NLSRLQLLNLS 369
Score = 174 (66.3 bits), Expect = 7.7e-10, P = 7.7e-10
Identities = 85/344 (24%), Positives = 137/344 (39%)
Query: 118 FKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILK 177
F G L + ++ + AF L+ L ++ + ++ + IFS+L SL L
Sbjct: 69 FSGSPNLTKVVFLNTQVRHLEPDAFGGLPRLQDLEITGSPVSNLS-AHIFSNLSSLEKLT 127
Query: 178 LDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXX 237
LD +++ +P ++ ++ L L L N + T+ F +L +L TL L
Sbjct: 128 LDFDRLAGLPEDLFCHM--DILESLQLQGNQLRTLPGRLFQ-SLRDLRTLNLAQNLLTQL 184
Query: 238 XXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLK 297
+L L +P L LS+L L L GN + + F LFSL+
Sbjct: 185 PKGAFQSLTGLQMLKLSNNMLARLPEGALGSLSSLQELFLDGNAITELSPHLFSQLFSLE 244
Query: 298 LVKI--NLIPNLDSIDQXXXXXXXXXXXXXXXXXAFSLTPLGTLKCDR----LDLSGNNF 351
++ + N I +L A P G ++ L LS N
Sbjct: 245 MLWLQHNAICHLPV---SLFSSLHNLTFLSLKDNALRTLPEGLFAHNQGLLHLSLSYNQL 301
Query: 352 SNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQ 410
I AF +L +LV + L N + + + F + QL + ++ N NL L LF
Sbjct: 302 ETIPEGAFTNLS--RLVSLTLSHNAITDLPEHVFRNLEQLVKLSLDSN-NLTALHPALFH 358
Query: 411 GNTNLKSVSLKGNSLSHLEASHFPLERISF-LDLSDNPLHCDCN 453
+ L+ ++L N L+ L F F L L NP CDC+
Sbjct: 359 NLSRLQLLNLSRNQLTTLPGGIFDTNYDLFNLALLGNPWQCDCH 402
Score = 168 (64.2 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 59/231 (25%), Positives = 101/231 (43%)
Query: 76 LRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKIS 135
L+ L+++ + ++ L +H F + L L + ++ ++ L +D F + L++L L N++
Sbjct: 99 LQDLEITGSPVSNLSAHIFSNLSSLEKLTLDFDRLAGLPEDLFCHMDILESLQLQGNQLR 158
Query: 136 VINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLP 195
+ F+ L L L+ N +T F SL L++LKL NN + +P L +L
Sbjct: 159 TLPGRLFQSLRDLRTLNLAQNLLTQLPKGA-FQSLTGLQMLKLSNNMLARLPEGALGSL- 216
Query: 196 HQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXX 255
SL L+L+ N I + + F L +L L L +L L
Sbjct: 217 -SSLQELFLDGNAITELSPHLFS-QLFSLEMLWLQHNAICHLPVSLFSSLHNLTFLSLKD 274
Query: 256 XXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN 306
+P + L++L LS N I AF +L +LV + L N
Sbjct: 275 NALRTLPEGLFAHNQGLLHLSLSYNQLETIPEGAFTNLS--RLVSLTLSHN 323
Score = 168 (64.2 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 81/340 (23%), Positives = 145/340 (42%)
Query: 90 GSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLE 149
GS N K++ LN ++ L D F GL L+ L+++ + +S ++ F + LE
Sbjct: 71 GSPNL---TKVVFLN---TQVRHLEPDAFGGLPRLQDLEITGSPVSNLSAHIFSNLSSLE 124
Query: 150 LLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLI 209
L L F+ + + ++F + L L+L NQ+ +P + +L + L L L +NL+
Sbjct: 125 KLTLDFDRLAGLPE-DLFCHMDILESLQLQGNQLRTLPGRLFQSL--RDLRTLNLAQNLL 181
Query: 210 ETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKL 269
+ +F +LT L L L +L +L + S+L
Sbjct: 182 TQLPKGAFQ-SLTGLQMLKLSNNMLARLPEGALGSLSSLQELFLDGNAITELSPHLFSQL 240
Query: 270 SALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQXXXXXXXXXXXXXXXX 328
+L L L N ++ F SL +L ++L N L ++ +
Sbjct: 241 FSLEMLWLQHNAICHLPVSLFSSLHNLTF--LSLKDNALRTLPEGLFAHNQGLLHLSLSY 298
Query: 329 XAFSLTPLGTL-KCDRL---DLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRA 383
P G RL LS N +++ F++L +LVK++L N L ++
Sbjct: 299 NQLETIPEGAFTNLSRLVSLTLSHNAITDLPEHVFRNLE--QLVKLSLDSNNLTALHPAL 356
Query: 384 FVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGN 423
F + +L+ + ++ N L LP +F N +L +++L GN
Sbjct: 357 FHNLSRLQLLNLSRNQ-LTTLPGGIFDTNYDLFNLALLGN 395
Score = 159 (61.0 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 41/139 (29%), Positives = 72/139 (51%)
Query: 53 VQTIILRENRISNVHYTL-SFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEIS 111
++ + L+ N I ++ +L S L L L N + L F + LL+L++SYN++
Sbjct: 243 LEMLWLQHNAICHLPVSLFSSLHNLTFLSLKDNALRTLPEGLFAHNQGLLHLSLSYNQLE 302
Query: 112 ALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLK 171
+ + F L L +L LS+N I+ + + FR+ L L L NN+T + +F +L
Sbjct: 303 TIPEGAFTNLSRLVSLTLSHNAITDLPEHVFRNLEQLVKLSLDSNNLTALHPA-LFHNLS 361
Query: 172 SLRILKLDNNQILDVPNNV 190
L++L L NQ+ +P +
Sbjct: 362 RLQLLNLSRNQLTTLPGGI 380
>ZFIN|ZDB-GENE-060503-496 [details] [associations]
symbol:lrrc24 "leucine rich repeat containing 24"
species:7955 "Danio rerio" [GO:0005515 "protein binding"
evidence=IPI] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 ZFIN:ZDB-GENE-060503-496
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00700000104028 CTD:441381 EMBL:BX000489
IPI:IPI00876679 RefSeq:XP_694151.2 UniGene:Dr.141919
Ensembl:ENSDART00000114047 GeneID:565790 KEGG:dre:565790
NextBio:20887101 Bgee:F1QV37 Uniprot:F1QV37
Length = 594
Score = 192 (72.6 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 61/201 (30%), Positives = 93/201 (46%)
Query: 10 LILALTKL--NKAICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVH 67
L+L L +L CPS C+C+ +E C G++ +P + QTI L++N I +
Sbjct: 10 LVLMLAQLCSTSLACPSGCRCYSLTVE--CGSIGIKEIPQGITQGTQTIFLQDNAIGQIR 67
Query: 68 YT-LSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKT 126
LS +L L L N I+ L F LL L ++ N I ++ D F+GL L+
Sbjct: 68 QRDLSDLGQLHYLYLQNNSISTLEPGAFRSLGLLLELALNGNRIHLITADVFRGLDHLRI 127
Query: 127 LDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDV 186
L L+ N+I+ + FR L+ L L N + D + L SL +L L N + +
Sbjct: 128 LYLAGNQINRLEDYTFRGLQRLQELHLQENVLEVLGDQALVG-LSSLALLDLSRNNLRTL 186
Query: 187 PNNVLSNLPHQSLHYLYLNEN 207
L P SL L + +N
Sbjct: 187 SPASLK--PLVSLQVLRVTDN 205
Score = 116 (45.9 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 45/151 (29%), Positives = 67/151 (44%)
Query: 77 RSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISV 136
+++ L N I + + +L L + N IS L F+ L L L L+ N+I +
Sbjct: 54 QTIFLQDNAIGQIRQRDLSDLGQLHYLYLQNNSISTLEPGAFRSLGLLLELALNGNRIHL 113
Query: 137 INKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPH 196
I FR HL +L L+ N I ED F L+ L+ L L N + + + L L
Sbjct: 114 ITADVFRGLDHLRILYLAGNQINRLEDYT-FRGLQRLQELHLQENVLEVLGDQALVGL-- 170
Query: 197 QSLHYLYLNENLIETVLDNSFPFTLTNLHTL 227
SL L L+ N + T+ S L +L L
Sbjct: 171 SSLALLDLSRNNLRTLSPASLK-PLVSLQVL 200
Score = 51 (23.0 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 514 CSSPPDIKGLEVKAVPENSVHC 535
C+ PP + L + VP NS+ C
Sbjct: 237 CAEPPRLSHLSLVEVPPNSLVC 258
>UNIPROTKB|F1RJ55 [details] [associations]
symbol:OMG "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048683 "regulation of collateral sprouting of intact
axon in response to injury" evidence=IEA] [GO:0042802 "identical
protein binding" evidence=IEA] [GO:0031102 "neuron projection
regeneration" evidence=IEA] InterPro:IPR001611 PROSITE:PS51450
InterPro:IPR003591 SMART:SM00369 GO:GO:0031102 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 InterPro:IPR025875 Pfam:PF12799
OMA:SSNKLWT GO:GO:0048683 GeneTree:ENSGT00690000102271
EMBL:CU469262 Ensembl:ENSSSCT00000019320 Uniprot:F1RJ55
Length = 440
Score = 195 (73.7 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 63/224 (28%), Positives = 107/224 (47%)
Query: 8 IFLILALTKLNKAICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVH 67
+F++L LT ICP +C C ++ C+ L +P L + + L N +++H
Sbjct: 12 LFILLLLTPGILCICPLQCICTERHRHVDCSGRNLTTLPSGLQENIIHLNLSYNHFTDLH 71
Query: 68 YTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTL 127
L+ Y LR+LD+S N++ L + + L N++ + N I L K LK L
Sbjct: 72 NQLTQYTNLRTLDISNNRLESLPA---QLPRSLWNMSAANNNIKLLEKSDTAYQWNLKYL 128
Query: 128 DLSYNKISVINKTAFRDTLH-LELLILSFNNITYFEDSEIFSSLKS-LRILKLDNNQILD 185
D+S N + + ++TL LE+L LS N + + +++ S L I+ L +N +
Sbjct: 129 DVSKNMLEKV--VLIKNTLRSLEVLNLSSNKLW-----TVPTNMPSKLHIVDLSHNSLTQ 181
Query: 186 VPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLAL 229
+ L NL + L +LYL+ N + D +F L L + L
Sbjct: 182 ILPGTLINLTN--LTHLYLHNNKFTFIPDQAFD-QLLQLQEITL 222
>UNIPROTKB|F1MT22 [details] [associations]
symbol:LGR5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048839 "inner ear development" evidence=IEA]
[GO:0016500 "protein-hormone receptor activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0048839 GO:GO:0016500 GeneTree:ENSGT00650000092962
OMA:FNPHFKE EMBL:DAAA02012288 EMBL:DAAA02012284 EMBL:DAAA02012285
EMBL:DAAA02012286 EMBL:DAAA02012287 IPI:IPI00688410
UniGene:Bt.94743 ProteinModelPortal:F1MT22
Ensembl:ENSBTAT00000017631 NextBio:20873048 Uniprot:F1MT22
Length = 907
Score = 200 (75.5 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 110/433 (25%), Positives = 175/433 (40%)
Query: 22 CPSRCQCF-DQK--LEASCTDAGLEVVPIQLNPEVQTIILRENRISNVH----YTLSFYI 74
CP+ CQC D + L C+D GL +P L+ + L N IS + ++L F
Sbjct: 34 CPAHCQCEPDGRMLLRVDCSDLGLSELPSNLSVFTSYLDLSMNNISQLPPSPLHSLRFLE 93
Query: 75 ELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKI 134
ELR L+ N + + F L L + N + + + + L+ L++L L N+I
Sbjct: 94 ELR---LAGNALTYIPKGAFAGLYSLKVLMLQNNHLRQVPTEALQNLRSLQSLRLDANRI 150
Query: 135 SVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNL 194
S + + F L L L N +T + F SL +L+ + L N+I +P+ NL
Sbjct: 151 SSVPPSCFSGLHSLRHLWLDDNALTEIP-VQAFRSLSALQAMTLALNKIHHIPDYAFGNL 209
Query: 195 PHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXX 254
SL L+L+ N I ++ F L +L TL L TL L
Sbjct: 210 --SSLVVLHLHNNRIHSLGKKCFD-GLHSLETLDLNYNNLDEFPTAVR-TLSNLKELGFH 265
Query: 255 XXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQXX 314
+IP K +L+ + N + AF+ L L+ + +N I +
Sbjct: 266 SNNIKSIPEKAFVGNPSLITIHFYDNPIQLVGRSAFQHLPELRTLTLN---GASQITEFP 322
Query: 315 XXXXXXXXXXXXXXXAFSLTPLGTLKCDRL------DLSGNNFSNIDSVAFKSLFSLKLV 368
A ++ L CD+L DLS N ++ S + KL
Sbjct: 323 DLTGTASLESLTLTGA-QISSLPQTVCDQLPNLQVLDLSYNLLEDLPSFSVCQ----KLQ 377
Query: 369 KINLIPN------LDSIDQRAFVDNIQL---ETVIINENMNLKQLPS--KLFQGNTNLKS 417
KI+L N D+ Q + ++ L + II+ N LPS KL + L S
Sbjct: 378 KIDLRHNEIYEIQADTFQQLFSLRSLNLAWNKIAIIDPNA-FSTLPSLRKLDLSSNRLSS 436
Query: 418 VSLKG-NSLSHLE 429
+ + G + L+HL+
Sbjct: 437 IPVTGLHGLTHLK 449
Score = 180 (68.4 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 106/424 (25%), Positives = 167/424 (39%)
Query: 23 PSRCQCFDQKLEASCTDAG-LEVVPIQLNPEVQTIILRENRISNVHY-TLSFYIELRSLD 80
PS F L+ S + L P+ ++ + L N ++ + + L+ L
Sbjct: 61 PSNLSVFTSYLDLSMNNISQLPPSPLHSLRFLEELRLAGNALTYIPKGAFAGLYSLKVLM 120
Query: 81 LSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKT 140
L N + + + + L +L + N IS++ F GL L+ L L N ++ I
Sbjct: 121 LQNNHLRQVPTEALQNLRSLQSLRLDANRISSVPPSCFSGLHSLRHLWLDDNALTEIPVQ 180
Query: 141 AFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLH 200
AFR L+ + L+ N I + D F +L SL +L L NN+I + L H SL
Sbjct: 181 AFRSLSALQAMTLALNKIHHIPDYA-FGNLSSLVVLHLHNNRIHSLGKKCFDGL-H-SLE 237
Query: 201 YLYLNENLIETVLDNSFPF---TLTNLHTLALXXXXXXXXXXXXXV---TLRTLHXXXXX 254
L LN N ++ FP TL+NL L V +L T+H
Sbjct: 238 TLDLNYNNLD-----EFPTAVRTLSNLKELGFHSNNIKSIPEKAFVGNPSLITIHFYDNP 292
Query: 255 XXXXXAIPTKQLSKLSAL-VNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQX 313
+ L +L L +N F ++ A +L +I+ +P
Sbjct: 293 IQLVGRSAFQHLPELRTLTLNGASQITEFPDLTGTASLESLTLTGAQISSLPQTVCDQLP 352
Query: 314 XXXXXXXXXXXXXXXXAFSLTPLGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLI 373
+FS+ K ++DL N I + F+ LFSL+ +NL
Sbjct: 353 NLQVLDLSYNLLEDLPSFSVCQ----KLQKIDLRHNEIYEIQADTFQQLFSLR--SLNLA 406
Query: 374 PN-LDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGN-SLSHLEAS 431
N + ID AF L + ++ N L +P G T+LK L GN +L L +S
Sbjct: 407 WNKIAIIDPNAFSTLPSLRKLDLSSN-RLSSIPVTGLHGLTHLK---LTGNHALQSLISS 462
Query: 432 -HFP 434
+FP
Sbjct: 463 ENFP 466
Score = 154 (59.3 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 81/293 (27%), Positives = 118/293 (40%)
Query: 76 LRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKIS 135
L+++ L++NKI+ + + F + L+ L++ N I +L K F GL L+TLDL+YN +
Sbjct: 188 LQAMTLALNKIHHIPDYAFGNLSSLVVLHLHNNRIHSLGKKCFDGLHSLETLDLNYNNLD 247
Query: 136 VINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLP 195
TA R +L+ L NNI + + F SL + +N I V + +LP
Sbjct: 248 EF-PTAVRTLSNLKELGFHSNNIKSIPE-KAFVGNPSLITIHFYDNPIQLVGRSAFQHLP 305
Query: 196 HQSLHYLYLNENLIETVLDNSFP-FTLT-NLHTLALXXXXXXXXXXXXXVTLRTLHXXXX 253
L L LN T FP T T +L +L L L L
Sbjct: 306 E--LRTLTLNGASQIT----EFPDLTGTASLESLTLTGAQISSLPQTVCDQLPNLQVLDL 359
Query: 254 XXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQ 312
+P+ S L +DL N I + F+ LFSL+ +NL N + ID
Sbjct: 360 SYNLLEDLPS--FSVCQKLQKIDLRHNEIYEIQADTFQQLFSLR--SLNLAWNKIAIIDP 415
Query: 313 XXXXXXXXXXXXXXXXXAFSLTPL-GTLKCDRLDLSGNNF--SNIDSVAFKSL 362
S P+ G L L+GN+ S I S F L
Sbjct: 416 NAFSTLPSLRKLDLSSNRLSSIPVTGLHGLTHLKLTGNHALQSLISSENFPEL 468
Score = 123 (48.4 bits), Expect = 0.00057, P = 0.00057
Identities = 35/125 (28%), Positives = 64/125 (51%)
Query: 51 PEVQTIILRENRISNVHYTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEI 110
P +Q + L N + ++ + S +L+ +DL N+I + + F+ L +LN+++N+I
Sbjct: 352 PNLQVLDLSYNLLEDLP-SFSVCQKLQKIDLRHNEIYEIQADTFQQLFSLRSLNLAWNKI 410
Query: 111 SALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSL 170
+ + + F L L+ LDLS N++S I T HL+L + + SE F L
Sbjct: 411 AIIDPNAFSTLPSLRKLDLSSNRLSSIPVTGLHGLTHLKLT--GNHALQSLISSENFPEL 468
Query: 171 KSLRI 175
K + +
Sbjct: 469 KVIEM 473
>UNIPROTKB|O75473 [details] [associations]
symbol:LGR5 "Leucine-rich repeat-containing G-protein
coupled receptor 5" species:9606 "Homo sapiens" [GO:0016500
"protein-hormone receptor activity" evidence=IEA] [GO:0048839
"inner ear development" evidence=IEA] [GO:0004930 "G-protein
coupled receptor activity" evidence=TAS] [GO:0005887 "integral to
plasma membrane" evidence=TAS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=TAS] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS00237 PROSITE:PS50262 PROSITE:PS51450 GO:GO:0005887
GO:GO:0004930 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0048839
GO:GO:0016500 InterPro:IPR026906 Pfam:PF13306 HOVERGEN:HBG031675
HOGENOM:HOG000231829 EMBL:AF062006 EMBL:AF061444 EMBL:AC078860
EMBL:AC090116 EMBL:BC096324 EMBL:BC096325 EMBL:BC096326
EMBL:BC099650 IPI:IPI00021131 IPI:IPI00940760 PIR:JE0176
RefSeq:NP_003658.1 UniGene:Hs.658889 ProteinModelPortal:O75473
SMR:O75473 STRING:O75473 PhosphoSite:O75473 PRIDE:O75473
Ensembl:ENST00000266674 Ensembl:ENST00000540815 GeneID:8549
KEGG:hsa:8549 UCSC:uc001swl.3 UCSC:uc001swm.3 CTD:8549
GeneCards:GC12P071833 HGNC:HGNC:4504 HPA:HPA012530 MIM:606667
neXtProt:NX_O75473 PharmGKB:PA28894 InParanoid:O75473 KO:K04308
OMA:FNPHFKE OrthoDB:EOG46143B PhylomeDB:O75473 GenomeRNAi:8549
NextBio:32032 ArrayExpress:O75473 Bgee:O75473 CleanEx:HS_LGR5
Genevestigator:O75473 GermOnline:ENSG00000139292 Uniprot:O75473
Length = 907
Score = 200 (75.5 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 98/377 (25%), Positives = 154/377 (40%)
Query: 79 LDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVIN 138
LDLS+N I+ L + L L ++ N ++ + K F GL LK L L N++ +
Sbjct: 71 LDLSMNNISQLLPNPLPSLRFLEELRLAGNALTYIPKGAFTGLYSLKVLMLQNNQLRHVP 130
Query: 139 KTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQS 198
A ++ L+ L L N+I+Y S FS L SLR L LD+N + ++P +L +
Sbjct: 131 TEALQNLRSLQSLRLDANHISYVPPS-CFSGLHSLRHLWLDDNALTEIPVQAFRSL--SA 187
Query: 199 LHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXX 258
L + L N I + D +F L++L L L L +L
Sbjct: 188 LQAMTLALNKIHHIPDYAFG-NLSSLVVLHLHNNRIHSLGKKCFDGLHSLETLDLNYNNL 246
Query: 259 XAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQXXXXXX 318
PT + LS L L NN +I AF + L+ I+ N
Sbjct: 247 DEFPTA-IRTLSNLKELGFHSNNIRSIPEKAFVG--NPSLITIHFYDNPIQFVGRSAFQH 303
Query: 319 XXXXXXXXXXXAFSLTPL----GTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKI--NL 372
A +T GT + L L+G S++ L +L+++ + NL
Sbjct: 304 LPELRTLTLNGASQITEFPDLTGTANLESLTLTGAQISSLPQTVCNQLPNLQVLDLSYNL 363
Query: 373 IPNLDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASH 432
+ +L S + I L NE +K FQ +L+S++L N ++ + +
Sbjct: 364 LEDLPSFSVCQKLQKIDLRH---NEIYEIKV---DTFQQLLSLRSLNLAWNKIAIIHPNA 417
Query: 433 FP-LERISFLDLSDNPL 448
F L + LDLS N L
Sbjct: 418 FSTLPSLIKLDLSSNLL 434
Score = 187 (70.9 bits), Expect = 6.4e-11, P = 6.4e-11
Identities = 108/429 (25%), Positives = 169/429 (39%)
Query: 22 CPSRCQCF-DQK--LEASCTDAGLEVVPIQLNPEVQTIILRENRIS----NVHYTLSFYI 74
CP+ C C D + L C+D GL +P L+ + L N IS N +L F
Sbjct: 34 CPTHCHCEPDGRMLLRVDCSDLGLSELPSNLSVFTSYLDLSMNNISQLLPNPLPSLRFLE 93
Query: 75 ELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKI 134
ELR L+ N + + F L L + N++ + + + L+ L++L L N I
Sbjct: 94 ELR---LAGNALTYIPKGAFTGLYSLKVLMLQNNQLRHVPTEALQNLRSLQSLRLDANHI 150
Query: 135 SVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNL 194
S + + F L L L N +T + F SL +L+ + L N+I +P+ NL
Sbjct: 151 SYVPPSCFSGLHSLRHLWLDDNALTEIP-VQAFRSLSALQAMTLALNKIHHIPDYAFGNL 209
Query: 195 PHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXX 254
SL L+L+ N I ++ F L +L TL L TL L
Sbjct: 210 --SSLVVLHLHNNRIHSLGKKCFD-GLHSLETLDLNYNNLDEFPTAIR-TLSNLKELGFH 265
Query: 255 XXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSI-DQX 313
+IP K +L+ + N + AF+ L L+ + +N + D
Sbjct: 266 SNNIRSIPEKAFVGNPSLITIHFYDNPIQFVGRSAFQHLPELRTLTLNGASQITEFPDLT 325
Query: 314 XXXXXXXXXXXXXXXXAFSLTPLGTL-KCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINL 372
+ T L LDLS N ++ S + KL KI+L
Sbjct: 326 GTANLESLTLTGAQISSLPQTVCNQLPNLQVLDLSYNLLEDLPSFSVCQ----KLQKIDL 381
Query: 373 IPN------LDSIDQRAFVDNIQL---ETVIINENMNLKQLPS--KLFQGNTNLKSVSLK 421
N +D+ Q + ++ L + II+ N LPS KL + L S +
Sbjct: 382 RHNEIYEIKVDTFQQLLSLRSLNLAWNKIAIIHPNA-FSTLPSLIKLDLSSNLLSSFPIT 440
Query: 422 G-NSLSHLE 429
G + L+HL+
Sbjct: 441 GLHGLTHLK 449
Score = 165 (63.1 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 115/438 (26%), Positives = 175/438 (39%)
Query: 23 PSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTL----SF--YIEL 76
PS F L+ S + +++P NP L E R++ T +F L
Sbjct: 61 PSNLSVFTSYLDLSMNNIS-QLLP---NPLPSLRFLEELRLAGNALTYIPKGAFTGLYSL 116
Query: 77 RSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISV 136
+ L L N++ + + + L +L + N IS + F GL L+ L L N ++
Sbjct: 117 KVLMLQNNQLRHVPTEALQNLRSLQSLRLDANHISYVPPSCFSGLHSLRHLWLDDNALTE 176
Query: 137 INKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPH 196
I AFR L+ + L+ N I + D F +L SL +L L NN+I + L H
Sbjct: 177 IPVQAFRSLSALQAMTLALNKIHHIPDYA-FGNLSSLVVLHLHNNRIHSLGKKCFDGL-H 234
Query: 197 QSLHYLYLNENLIETVLDNSFPF---TLTNLHTLALXXXXXXXXXXXXXV---TLRTLHX 250
SL L LN N ++ FP TL+NL L V +L T+H
Sbjct: 235 -SLETLDLNYNNLD-----EFPTAIRTLSNLKELGFHSNNIRSIPEKAFVGNPSLITIHF 288
Query: 251 XXX-----XXXXXXAIP---TKQLSKLSALVNL-DLSGNNFSNIDSVAFKS--LFSLKLV 299
+P T L+ S + DL+G +N++S+ + SL
Sbjct: 289 YDNPIQFVGRSAFQHLPELRTLTLNGASQITEFPDLTGT--ANLESLTLTGAQISSLPQT 346
Query: 300 KINLIPNLDSIDQXXXXXXXXXXXXXXXXXAFSLTPLGTLKCDRLDLSGNNFSNIDSVAF 359
N +PNL +D +FS+ K ++DL N I F
Sbjct: 347 VCNQLPNLQVLD--------LSYNLLEDLPSFSVCQ----KLQKIDLRHNEIYEIKVDTF 394
Query: 360 KSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSV 418
+ L SL+ +NL N + I AF L + ++ N+ L P G T+LK
Sbjct: 395 QQLLSLR--SLNLAWNKIAIIHPNAFSTLPSLIKLDLSSNL-LSSFPITGLHGLTHLK-- 449
Query: 419 SLKGN-SLSHLEAS-HFP 434
L GN +L L +S +FP
Sbjct: 450 -LTGNHALQSLISSENFP 466
>ZFIN|ZDB-GENE-040220-5 [details] [associations]
symbol:tlr22 "toll-like receptor 22" species:7955
"Danio rerio" [GO:0007165 "signal transduction" evidence=IEA]
[GO:0052033 "pathogen-associated molecular pattern dependent
induction by symbiont of host innate immune response" evidence=IDA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0009617 "response to bacterium"
evidence=IDA] Pfam:PF00560 InterPro:IPR000157 InterPro:IPR001611
Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450 SMART:SM00255
ZFIN:ZDB-GENE-040220-5 GO:GO:0016021 GO:GO:0007165 GO:GO:0009617
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005622 InterPro:IPR025875 Pfam:PF12799 GO:GO:0052033
InterPro:IPR026906 Pfam:PF13306 SUPFAM:SSF52200 EMBL:BC163527
IPI:IPI00898178 RefSeq:NP_001122147.1 UniGene:Dr.30190
ProteinModelPortal:B3DJL6 STRING:B3DJL6 GeneID:403135
KEGG:dre:403135 CTD:403135 HOVERGEN:HBG055859 NextBio:20816896
Uniprot:B3DJL6
Length = 947
Score = 200 (75.5 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 113/427 (26%), Positives = 176/427 (41%)
Query: 50 NPEVQTIILREN-RISNVHYTLSFYIE-LRSLDLSVNKINVLGSHNFEYQNKLLNLNISY 107
N + I L N R++ LS LR L L KI L +H F+ ++L L++
Sbjct: 279 NNTLNKIRLNGNVRLNKTSLLLSVCSPMLRVLRLIATKIKHLTNHMFDPCSELSELDLGG 338
Query: 108 NEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIF 167
NEIS LS+ F+G K+LK L L NK++ + + F+ LE + LS N+I ++ F
Sbjct: 339 NEISNLSQSMFRGFKQLKKLQLQINKLTRVTNS-FQILTSLEFIDLSRNHIHKLSCND-F 396
Query: 168 SSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNEN---LIETVLDNSFPFTLTNL 224
++L ++ L L +N+I + + + +L +SL L L N I+ V N P+ L L
Sbjct: 397 ANLTQVKTLYLYSNKISSIRSCLFKDL--KSLEVLRLGTNNLLKIDDVFSNG-PYFLKEL 453
Query: 225 HTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSN 284
L L L+ I L L +L LS N +
Sbjct: 454 Q---LSYNKLSLIKSHTFGNLPQLNNLSLEDNQISEIEGYAFGGLENLTSLFLSSNKITG 510
Query: 285 IDSVAFKSLFS--LKLVKINLIPNLDSI--DQXXXXXXXXXXXXXXXXXAFSLTPLGTLK 340
++FS L ++L N S D+ +G L
Sbjct: 511 KTLTTHPNVFSGMPNLQNLDLFANSISFAYDKLKYPLFKDLKNLRELSLYSQRRGIGQLP 570
Query: 341 CDRLD-LS-------GN-NFSNIDSVAFK---SLFSLKLVKINLIPNLDSIDQRAFVDNI 388
+ L+ LS GN N + ++ F L+ L L K N + D+I F
Sbjct: 571 SNLLEGLSSLQMFYIGNTNLNQLNPNLFNFTPQLWFLDLSK-NALREDDAIPPELFHPIP 629
Query: 389 QLETVIINENMNLKQLPSKLFQGNTN-LKSVSLKGNSLSHLEASHFP-LERISFLDLSDN 446
L +II+ L+ L + L N N L ++ GN + + + L R++ LDL +N
Sbjct: 630 NLTKLIISRTQ-LRSL-NFLLGANLNKLSTLRASGNEIDSVNETLIKSLPRLAVLDLQNN 687
Query: 447 PLHCDCN 453
CDCN
Sbjct: 688 TFTCDCN 694
Score = 178 (67.7 bits), Expect = 6.4e-10, P = 6.4e-10
Identities = 90/381 (23%), Positives = 152/381 (39%)
Query: 79 LDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVIN 138
LD+S N + + L LN+S N+IS + F L L L+L+ N+++ ++
Sbjct: 63 LDISFNSFAQIQIEDLNILLNLQYLNVSNNKISKIQDGAFGSLFNLTDLNLASNRLNAVS 122
Query: 139 KTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQS 198
R +L +L L N I+ ++S FS+L SL++L L N + + ++V L
Sbjct: 123 NGMLRGLTNLLVLRLDRNYISVIKESA-FSTLHSLQVLNLSKNHLRHI-DDVKPVLASLY 180
Query: 199 LHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXV--TLRTLHXXXXXXX 256
L LY+ N + +L L L + TL L
Sbjct: 181 LEELYIGSNYFNVFNSSELSTKPLSLKRLDLSNNRFAAFQLTNNIFPTLNHLDLSYCGHN 240
Query: 257 XXXAIPTKQLSKLSALVNLDLSGNNFS--NIDSV--AFKS-LFSLKL---VKINLIPNLD 308
A + S L+++ L N S D+V +F + L ++L V++N L
Sbjct: 241 GTMAWNVTEKSYLASVKTLYFMDVNMSIQTADNVLQSFNNTLNKIRLNGNVRLNKTSLLL 300
Query: 309 SIDQXXXXXXXXXXXXXXXXXAFSLTPLGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLV 368
S+ P L LDL GN SN+ F+ LK +
Sbjct: 301 SVCSPMLRVLRLIATKIKHLTNHMFDPCSELS--ELDLGGNEISNLSQSMFRGFKQLKKL 358
Query: 369 KINLIPNLDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHL 428
++ I L + +F LE + ++ N ++ +L F T +K++ L N +S +
Sbjct: 359 QLQ-INKLTRVTN-SFQILTSLEFIDLSRN-HIHKLSCNDFANLTQVKTLYLYSNKISSI 415
Query: 429 EASHFP-LERISFLDLSDNPL 448
+ F L+ + L L N L
Sbjct: 416 RSCLFKDLKSLEVLRLGTNNL 436
Score = 153 (58.9 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 54/159 (33%), Positives = 87/159 (54%)
Query: 70 LSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDL 129
L+ + L+ L++S NKI+ + F L +LN++ N ++A+S +GL L L L
Sbjct: 78 LNILLNLQYLNVSNNKISKIQDGAFGSLFNLTDLNLASNRLNAVSNGMLRGLTNLLVLRL 137
Query: 130 SYNKISVINKTAFRDTLH-LELLILSFNNITYFEDSE-IFSSLKSLRILKLDNNQILDVP 187
N ISVI ++AF TLH L++L LS N++ + +D + + +SL L L + +N
Sbjct: 138 DRNYISVIKESAF-STLHSLQVLNLSKNHLRHIDDVKPVLASLY-LEELYIGSNYFNVFN 195
Query: 188 NNVLSNLPHQSLHYLYLNENLIET--VLDNSFPFTLTNL 224
++ LS P SL L L+ N + +N FP TL +L
Sbjct: 196 SSELSTKP-LSLKRLDLSNNRFAAFQLTNNIFP-TLNHL 232
Score = 132 (51.5 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 110/488 (22%), Positives = 168/488 (34%)
Query: 76 LRSLDLSVNKINVLGSHNFEYQNKLLN--------LNISYNEISALSKDTFKGLKELKTL 127
L+S + ++NKI + G+ + LL+ L + +I L+ F EL L
Sbjct: 275 LQSFNNTLNKIRLNGNVRLNKTSLLLSVCSPMLRVLRLIATKIKHLTNHMFDPCSELSEL 334
Query: 128 DLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVP 187
DL N+IS ++++ FR L+ L L N +T +S F L SL + L N I +
Sbjct: 335 DLGGNEISNLSQSMFRGFKQLKKLQLQINKLTRVTNS--FQILTSLEFIDLSRNHIHKLS 392
Query: 188 NNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRT 247
N +NL YLY N+ I ++ F L +L L L
Sbjct: 393 CNDFANLTQVKTLYLYSNK--ISSIRSCLFK-DLKSLEVLRLGTNNLLKIDDVFSNGPYF 449
Query: 248 LHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNL 307
L I + L L NL L N S I+ AF L NL
Sbjct: 450 LKELQLSYNKLSLIKSHTFGNLPQLNNLSLEDNQISEIEGYAFGGL-----------ENL 498
Query: 308 DSIDQXXXXXXXXXXXXXXXXXAFSLTP-LGTLKCDRLDLSGNNFSNIDSVAFKSLFSLK 366
S+ FS P L L +S + + FK L +L+
Sbjct: 499 TSL--FLSSNKITGKTLTTHPNVFSGMPNLQNLDLFANSISFA-YDKLKYPLFKDLKNLR 555
Query: 367 LVKI-NLIPNLDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSL 425
+ + + + + L+ I N NL QL LF L + L N+L
Sbjct: 556 ELSLYSQRRGIGQLPSNLLEGLSSLQMFYIG-NTNLNQLNPNLFNFTPQLWFLDLSKNAL 614
Query: 426 SHLEAS----HFPLERISFLDLSDNPLH-------CDCNXXXXXXXXXXXXKSTMETTTV 474
+A P+ ++ L +S L + N S ET
Sbjct: 615 REDDAIPPELFHPIPNLTKLIISRTQLRSLNFLLGANLNKLSTLRASGNEIDSVNETLIK 674
Query: 475 AYEMTSNTSISPGTTT----EAQRVDRIIKNNHSLTIVLNNLKCSSPPDIKGLEVKAVPE 530
+ + + T T A +D KN + L+ CS P ++G +
Sbjct: 675 SLPRLAVLDLQNNTFTCDCNNAFFIDWAKKNESTQVYYLSRYTCSYPRTLRGTSLAEF-- 732
Query: 531 NSVHCESN 538
N+ C N
Sbjct: 733 NTDSCTFN 740
Score = 125 (49.1 bits), Expect = 0.00036, P = 0.00036
Identities = 94/414 (22%), Positives = 162/414 (39%)
Query: 58 LRENRISNVHYTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDT 117
L NR + T + + L LDLS N + N ++ L ++ Y +S T
Sbjct: 211 LSNNRFAAFQLTNNIFPTLNHLDLSYCGHNGTMAWNVTEKSYLASVKTLYFMDVNMSIQT 270
Query: 118 FKGLKELKTLDLSYNKISV-----INKTAFRDTL---HLELLILSFNNITYFEDSEIFSS 169
+ L++ + + NKI + +NKT+ ++ L +L L I + + +F
Sbjct: 271 ADNV--LQSFNNTLNKIRLNGNVRLNKTSLLLSVCSPMLRVLRLIATKIKHLTN-HMFDP 327
Query: 170 LKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLAL 229
L L L N+I ++ ++ + L L L N + T + NSF LT+L + L
Sbjct: 328 CSELSELDLGGNEISNLSQSMFRGF--KQLKKLQLQINKL-TRVTNSFQI-LTSLEFIDL 383
Query: 230 XXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVA 289
L + +I + L +L L L NN ID V
Sbjct: 384 SRNHIHKLSCNDFANLTQVKTLYLYSNKISSIRSCLFKDLKSLEVLRLGTNNLLKIDDVF 443
Query: 290 FKSLFSLKLV-----KINLIPN--LDSIDQXXXXXXXXXXXXXXXXXAFS-LTPLGTLKC 341
+ LK + K++LI + ++ Q AF L L +L
Sbjct: 444 SNGPYFLKELQLSYNKLSLIKSHTFGNLPQLNNLSLEDNQISEIEGYAFGGLENLTSLFL 503
Query: 342 DRLDLSGNNFSNIDSV--AFKSLFSLKLVKINLIPNLDSIDQRAFVDNIQL-ETVIINEN 398
++G + +V +L +L L ++ D + F D L E + ++
Sbjct: 504 SSNKITGKTLTTHPNVFSGMPNLQNLDLFANSISFAYDKLKYPLFKDLKNLRELSLYSQR 563
Query: 399 MNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFPLE-RISFLDLSDNPLHCD 451
+ QLPS L +G ++L+ + +L+ L + F ++ FLDLS N L D
Sbjct: 564 RGIGQLPSNLLEGLSSLQMFYIGNTNLNQLNPNLFNFTPQLWFLDLSKNALRED 617
>MGI|MGI:2145995 [details] [associations]
symbol:Amigo2 "adhesion molecule with Ig like domain 2"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=ISO] [GO:0007156 "homophilic cell adhesion"
evidence=ISO;ISS] [GO:0007157 "heterophilic cell-cell adhesion"
evidence=ISO;ISS] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=ISO] [GO:0043066 "negative
regulation of apoptotic process" evidence=ISO] [GO:0043069
"negative regulation of programmed cell death" evidence=ISO;ISS]
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:2145995 GO:GO:0016021 GO:GO:0005886
GO:GO:0005634 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0043069
GO:GO:0007157 InterPro:IPR000372 SMART:SM00013 eggNOG:NOG146733
HOGENOM:HOG000231327 HOVERGEN:HBG080231 GO:GO:0007156
GeneTree:ENSGT00530000063545 CTD:347902 OMA:SCIAMNR
OrthoDB:EOG43XV36 EMBL:AY237006 EMBL:AB078880 IPI:IPI00281119
RefSeq:NP_001158035.1 RefSeq:NP_001158074.1 RefSeq:NP_835215.1
UniGene:Mm.24005 ProteinModelPortal:Q80ZD9 SMR:Q80ZD9 PRIDE:Q80ZD9
Ensembl:ENSMUST00000053106 GeneID:105827 KEGG:mmu:105827
InParanoid:Q80ZD9 NextBio:357900 Bgee:Q80ZD9 CleanEx:MM_AMIGO2
Genevestigator:Q80ZD9 GermOnline:ENSMUSG00000048218 Uniprot:Q80ZD9
Length = 519
Score = 196 (74.1 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 59/209 (28%), Positives = 105/209 (50%)
Query: 5 LTCIFLILALTKLNKA-ICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRI 63
L C+ +I + + + +CP+ C C + SCT+ L VP L ++ + L NRI
Sbjct: 22 LLCLLVIAVMVSPSASGMCPTACICATDIV--SCTNKNLSKVPGNLFRLIKRLDLSYNRI 79
Query: 64 S--NVHYTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGL 121
+ + +++L +L L N I + + +F L L++S N + ++ TF+ L
Sbjct: 80 GLLDADWIPVSFVKLSTLILRHNNITSISTGSFSTTPNLKCLDLSSNRLKSVKSATFQEL 139
Query: 122 KELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSS---LKSLRILKL 178
K L+ L L N IS ++ AF HL+ L LS N +T F ++++ L L L +
Sbjct: 140 KALEVLLLYNNHISYLDPAAFGGLSHLQKLYLSGNFLTQFP-MDLYTGRFKLADLTFLDV 198
Query: 179 DNNQILDVPNNVLSNLPHQSLHYLYLNEN 207
N+I +P + ++ +P + L +YL+ N
Sbjct: 199 SYNRIPSIPMHHINLVPGRQLRGIYLHGN 227
Score = 44 (20.5 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 19/71 (26%), Positives = 33/71 (46%)
Query: 466 KSTMETTTVAYEMTSNTSISPGTTTEAQRVDRIIKNNHSLTIVLNNLKCSSPPDIKGLEV 525
K+ + T++ ++ +SPG T +A DR K + + L LK ++ G +V
Sbjct: 426 KAKRQKNTLSQSSAHSSILSPGPTGDASADDR--KAGKRV-VFLEPLKDTAAGQ-NG-KV 480
Query: 526 KAVPENSVHCE 536
K P +V E
Sbjct: 481 KLFPSETVIAE 491
>UNIPROTKB|Q0IIH3 [details] [associations]
symbol:OMG "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048683 "regulation of collateral sprouting of intact
axon in response to injury" evidence=IEA] [GO:0042802 "identical
protein binding" evidence=IEA] [GO:0031102 "neuron projection
regeneration" evidence=IEA] InterPro:IPR001611 PROSITE:PS51450
InterPro:IPR003591 SMART:SM00369 GO:GO:0031102 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 InterPro:IPR025875 Pfam:PF12799 CTD:4974
HOGENOM:HOG000115267 HOVERGEN:HBG007868 KO:K16666 OMA:SSNKLWT
OrthoDB:EOG4ZKJMC GO:GO:0048683 EMBL:DAAA02048537
GeneTree:ENSGT00690000102271 EMBL:BC122645 IPI:IPI00700720
RefSeq:NP_001070992.2 UniGene:Bt.29835 STRING:Q0IIH3
Ensembl:ENSBTAT00000035344 GeneID:407186 KEGG:bta:407186
eggNOG:NOG256868 InParanoid:Q0IIH3 NextBio:20818439 Uniprot:Q0IIH3
Length = 440
Score = 194 (73.4 bits), Expect = 3.0e-12, P = 3.0e-12
Identities = 60/211 (28%), Positives = 102/211 (48%)
Query: 8 IFLILALTKLNKAICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVH 67
+F++L LT ICP +C C ++ C+ L +P L + + L N +++H
Sbjct: 12 LFILLFLTPGILCICPLQCICTERHRHVDCSGRNLTTLPSGLQENIIHLNLSYNHFTDLH 71
Query: 68 YTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTL 127
L+ Y LR+LD+S N++ L + + L N++ + N I L K LK L
Sbjct: 72 NQLTQYTNLRTLDISNNRLESLPA---QLPRSLWNMSAANNNIKLLEKSDTAYQWNLKYL 128
Query: 128 DLSYNKISVINKTAFRDTLH-LELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDV 186
D+S N + + ++TL LE+L LS N + + + + S L ++ L NN + +
Sbjct: 129 DVSKNMLEKV--VLIKNTLRSLEVLNLSSNKL-WTVPTNMPSKLHTV---DLSNNSLTQI 182
Query: 187 PNNVLSNLPHQSLHYLYLNENLIETVLDNSF 217
L NL + L +LYL+ N + D +F
Sbjct: 183 LPGTLINLTN--LTHLYLHNNKFTFIPDQAF 211
>UNIPROTKB|P40197 [details] [associations]
symbol:GP5 "Platelet glycoprotein V" species:9606 "Homo
sapiens" [GO:0005518 "collagen binding" evidence=IEA] [GO:0007160
"cell-matrix adhesion" evidence=IEA] [GO:0010544 "negative
regulation of platelet activation" evidence=IEA] [GO:0005887
"integral to plasma membrane" evidence=TAS] [GO:0007155 "cell
adhesion" evidence=NAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007596 "blood coagulation" evidence=TAS] [GO:0007597 "blood
coagulation, intrinsic pathway" evidence=TAS] [GO:0030168 "platelet
activation" evidence=TAS] Reactome:REACT_604 Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0030168 GO:GO:0005887
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007597 GO:GO:0007155 GO:GO:0007160
InterPro:IPR000372 SMART:SM00013 GO:GO:0010544 EMBL:L11238
EMBL:Z23091 IPI:IPI00027410 PIR:A48030 RefSeq:NP_004479.1
UniGene:Hs.73734 ProteinModelPortal:P40197 SMR:P40197 STRING:P40197
PhosphoSite:P40197 DMDM:729616 PaxDb:P40197 PeptideAtlas:P40197
PRIDE:P40197 DNASU:2814 Ensembl:ENST00000323007
Ensembl:ENST00000401815 GeneID:2814 KEGG:hsa:2814 UCSC:uc003ftv.1
CTD:2814 GeneCards:GC03M194115 HGNC:HGNC:4443 MIM:173511
neXtProt:NX_P40197 PharmGKB:PA28823 HOGENOM:HOG000112798
HOVERGEN:HBG005906 InParanoid:P40197 KO:K06260 OMA:AMIKIGQ
OrthoDB:EOG4JHCFD PhylomeDB:P40197 GenomeRNAi:2814 NextBio:11093
PMAP-CutDB:P40197 ArrayExpress:P40197 Bgee:P40197 CleanEx:HS_GP5
Genevestigator:P40197 GermOnline:ENSG00000178732 Uniprot:P40197
Length = 560
Score = 203 (76.5 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
Identities = 79/351 (22%), Positives = 155/351 (44%)
Query: 53 VQTIILRENRISNVHY-TLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEIS 111
+Q +++ ++ IS V T S I+L++L LS NKI L + L L + +N +
Sbjct: 76 LQRLMISDSHISAVAPGTFSDLIKLKTLRLSRNKITHLPGALLDKMVLLEQLFLDHNALR 135
Query: 112 ALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLK 171
+ ++ F+ L L+ L L+ N++ + + F + +L+LL LS NN+T+ + + K
Sbjct: 136 GIDQNMFQKLVNLQELALNQNQLDFLPASLFTNLENLKLLDLSGNNLTHLPKGLLGAQAK 195
Query: 172 SLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXX 231
R+L L +N+++ + + +L++L +L L + N I ++ +F L NL +L L
Sbjct: 196 LERLL-LHSNRLVSLDSGLLNSLG--ALTELQFHRNHIRSIAPGAFD-RLPNLSSLTLSR 251
Query: 232 XXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFK 291
+ L +P ++ L L L+ + + AF+
Sbjct: 252 NHLAFLPSALFLHSHNLTLLTLFENPLAELPGVLFGEMGGLQELWLNRTQLRTLPAAAFR 311
Query: 292 SLFSLKLVKINLIPNLDSIDQXXXXXXXXXXXXXXXXXAFSLTPLGTL----KCDRLDLS 347
+L L+ + + L P L ++ Q + P G L K ++ L
Sbjct: 312 NLSRLRYLGVTLSPRLSALPQGAFQGLGELQVLALHSNGLTALPDGLLRGLGKLRQVSLR 371
Query: 348 GNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFVDNIQLETVIINEN 398
N + F++L SL+ V+++ L+++ F +L V++ N
Sbjct: 372 RNRLRALPRALFRNLSSLESVQLDH-NQLETLPGDVFGALPRLTEVLLGHN 421
Score = 197 (74.4 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 97/371 (26%), Positives = 154/371 (41%)
Query: 88 VLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLH 147
VL S +F L L IS + ISA++ TF L +LKTL LS NKI+ + +
Sbjct: 64 VLQSQSFSGMTVLQRLMISDSHISAVAPGTFSDLIKLKTLRLSRNKITHLPGALLDKMVL 123
Query: 148 LELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNEN 207
LE L L N + D +F L +L+ L L+ NQ+ +P ++ +NL ++L L L+ N
Sbjct: 124 LEQLFLDHNALRGI-DQNMFQKLVNLQELALNQNQLDFLPASLFTNL--ENLKLLDLSGN 180
Query: 208 LIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLS 267
+ T L L L L +L L +I
Sbjct: 181 NL-THLPKGLLGAQAKLERLLLHSNRLVSLDSGLLNSLGALTELQFHRNHIRSIAPGAFD 239
Query: 268 KLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKI--NLIPNLDSI---DQXXXXXXXXXX 322
+L L +L LS N+ + + S F +L L+ + N + L + +
Sbjct: 240 RLPNLSSLTLSRNHLAFLPSALFLHSHNLTLLTLFENPLAELPGVLFGEMGGLQELWLNR 299
Query: 323 XXXXXXXAFSLTPLGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQR 382
A + L L+ + LS S + AF+ L L+++ ++ L ++
Sbjct: 300 TQLRTLPAAAFRNLSRLRYLGVTLSPR-LSALPQGAFQGLGELQVLALHS-NGLTALPDG 357
Query: 383 AFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHF-PLERISFL 441
+L V + N L+ LP LF+ ++L+SV L N L L F L R++ +
Sbjct: 358 LLRGLGKLRQVSLRRN-RLRALPRALFRNLSSLESVQLDHNQLETLPGDVFGALPRLTEV 416
Query: 442 DLSDNPLHCDC 452
L N CDC
Sbjct: 417 LLGHNSWRCDC 427
Score = 37 (18.1 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
Identities = 7/23 (30%), Positives = 11/23 (47%)
Query: 513 KCSSPPDIKGLEVKAVPENSVHC 535
+C+ P GL + A+P C
Sbjct: 450 RCAGPGAHAGLPLWALPGGDAEC 472
>MGI|MGI:2443955 [details] [associations]
symbol:Lrig3 "leucine-rich repeats and immunoglobulin-like
domains 3" species:10090 "Mus musculus" [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:2443955 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101816 InterPro:IPR025875 Pfam:PF12799
HOGENOM:HOG000113380 HOVERGEN:HBG052353 CTD:121227 OMA:SHHQFVT
OrthoDB:EOG4K6G3K EMBL:AY505341 EMBL:BC065142 EMBL:AK044994
EMBL:AK078783 EMBL:AK129481 IPI:IPI00399981 RefSeq:NP_796126.4
UniGene:Mm.275586 PDB:3SO5 PDBsum:3SO5 ProteinModelPortal:Q6P1C6
SMR:Q6P1C6 PhosphoSite:Q6P1C6 PRIDE:Q6P1C6
Ensembl:ENSMUST00000074807 GeneID:320398 KEGG:mmu:320398
UCSC:uc007hhc.2 InParanoid:Q6P1C6 NextBio:396650 Bgee:Q6P1C6
Genevestigator:Q6P1C6 GermOnline:ENSMUSG00000020105 Uniprot:Q6P1C6
Length = 1117
Score = 200 (75.5 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 109/415 (26%), Positives = 174/415 (41%)
Query: 22 CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYT-LSFYIELRSLD 80
CP+ C C L+ C+ L +P L V + L NR+S + + LS L+ +
Sbjct: 47 CPAACHCLGDLLD--CSRRRLVRLPDPLPAWVTRLDLSHNRLSFIQTSSLSHLQSLQEVK 104
Query: 81 LSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKT 140
L+ N++ + + N + L+++ N I + + + + L+TLDLS N IS + +T
Sbjct: 105 LNNNELETIPNLGSISAN-IRQLSLAGNAIDKILPEQLEAFQSLETLDLSNNNISEL-RT 162
Query: 141 AFRDTLHLELLILSFNNITYFEDSEIFSSLKS-LRILKLDNNQILDVPNNVLSNLPHQSL 199
AF L L+ L ++ N ++ E F +L S L +LKL+ N+I +P + LP L
Sbjct: 163 AF-PPLQLKYLYINNNRVSSMEPG-YFDNLASTLLVLKLNRNRISAIPPKMFK-LPQ--L 217
Query: 200 HYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXX 259
+L LN N I+ V +F L L +L + L +
Sbjct: 218 QHLELNRNKIKNVDGLTFQ-GLGALKSLKMQRNGVTKLMDGAFWGLSNMEVLQLDHNNLT 276
Query: 260 AIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQXXXXXX 318
I L L L L LS N + I A++ F KL +++L N L +D
Sbjct: 277 EITKGWLYGLLMLRELHLSQNAINRISPDAWE--FCQKLSELDLTFNHLSRLDDSSFLGL 334
Query: 319 XXXXXXXXXXXAFSLTP----LGTLKCDRLDLSGNNFS-NIDSV--AFKSLFSLKLVKIN 371
S G LDL N S I+ + AF L L+ ++
Sbjct: 335 SLLNALHIGNNKVSYIADCAFRGLTSLKTLDLRNNEISWTIEDMSGAFSGLDRLR--QLI 392
Query: 372 LIPN-LDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSL 425
L N + SI ++AF LE + ++ N + L S F L+ + L +SL
Sbjct: 393 LQGNRIRSITKKAFAGLDTLEHLDLSGNA-IMSLQSNAFSQMKKLQQLHLNTSSL 446
Score = 164 (62.8 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 90/382 (23%), Positives = 152/382 (39%)
Query: 79 LDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVIN 138
LDLS N+++ + + + + L + ++ NE+ + + ++ L L+ N I I
Sbjct: 79 LDLSHNRLSFIQTSSLSHLQSLQEVKLNNNELETIP-NLGSISANIRQLSLAGNAIDKIL 137
Query: 139 KTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQS 198
LE L LS NNI+ + F L+ L+ L ++NN++ + NL +
Sbjct: 138 PEQLEAFQSLETLDLSNNNISELRTA--FPPLQ-LKYLYINNNRVSSMEPGYFDNLA-ST 193
Query: 199 LHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXX 258
L L LN N I + F L L L L L L
Sbjct: 194 LLVLKLNRNRISAIPPKMFK--LPQLQHLELNRNKIKNVDGLTFQGLGALKSLKMQRNGV 251
Query: 259 XAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKI--NLIPNLDSID--QXX 314
+ LS + L L NN + I L L+ + + N I N S D +
Sbjct: 252 TKLMDGAFWGLSNMEVLQLDHNNLTEITKGWLYGLLMLRELHLSQNAI-NRISPDAWEFC 310
Query: 315 XXXXXXXXXXXXXXXAFSLTPLGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKI--NL 372
+ LG + L + N S I AF+ L SLK + + N
Sbjct: 311 QKLSELDLTFNHLSRLDDSSFLGLSLLNALHIGNNKVSYIADCAFRGLTSLKTLDLRNNE 370
Query: 373 IP-NLDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEAS 431
I ++ + AF +L +I+ N ++ + K F G L+ + L GN++ L+++
Sbjct: 371 ISWTIEDMSG-AFSGLDRLRQLILQGN-RIRSITKKAFAGLDTLEHLDLSGNAIMSLQSN 428
Query: 432 HFP-LERISFLDLSDNPLHCDC 452
F ++++ L L+ + L CDC
Sbjct: 429 AFSQMKKLQQLHLNTSSLLCDC 450
Score = 154 (59.3 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 79/308 (25%), Positives = 134/308 (43%)
Query: 10 LILALTKLNKAICPSRCQCFDQKLEA-SCTDAGLEVVPIQLNP-EVQTIILRENRISNVH 67
L LA ++K I P + + F Q LE ++ + + P +++ + + NR+S++
Sbjct: 126 LSLAGNAIDK-ILPEQLEAF-QSLETLDLSNNNISELRTAFPPLQLKYLYINNNRVSSME 183
Query: 68 --YTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELK 125
Y + L L L+ N+I+ + F+ +L +L ++ N+I + TF+GL LK
Sbjct: 184 PGYFDNLASTLLVLKLNRNRISAIPPKMFKLP-QLQHLELNRNKIKNVDGLTFQGLGALK 242
Query: 126 TLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILD 185
+L + N ++ + AF ++E+L L NN+T ++ L LR L L N I
Sbjct: 243 SLKMQRNGVTKLMDGAFWGLSNMEVLQLDHNNLTEITKGWLYGLLM-LRELHLSQNAINR 301
Query: 186 VPNNVLSNLPHQSLHYLYLNENLIETVLDNSF-PFTLTN-LHTLALXXXXXXXXXXXXXV 243
+ + Q L L L N + + D+SF +L N LH
Sbjct: 302 ISPDAWEFC--QKLSELDLTFNHLSRLDDSSFLGLSLLNALHIGNNKVSYIADCAFRGLT 359
Query: 244 TLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKI-- 301
+L+TL + S L L L L GN +I AF L +L+ + +
Sbjct: 360 SLKTLDLRNNEISWTIEDMSGAFSGLDRLRQLILQGNRIRSITKKAFAGLDTLEHLDLSG 419
Query: 302 NLIPNLDS 309
N I +L S
Sbjct: 420 NAIMSLQS 427
Score = 138 (53.6 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 96/429 (22%), Positives = 166/429 (38%)
Query: 127 LDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDV 186
LDLS+N++S I ++ L+ + L+ N + + S+ ++R L L N I +
Sbjct: 79 LDLSHNRLSFIQTSSLSHLQSLQEVKLNNNELETIPNLGSISA--NIRQLSLAGNAIDKI 136
Query: 187 PNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLR 246
L QSL L L+ N I L +FP L L + L
Sbjct: 137 LPEQLEAF--QSLETLDLSNNNISE-LRTAFP--PLQLKYLYINNNRVSSMEPGYFDNLA 191
Query: 247 -TLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIP 305
TL AIP K KL L +L+L+ N N+D + F+ L +LK +K+
Sbjct: 192 STLLVLKLNRNRISAIPPKMF-KLPQLQHLELNRNKIKNVDGLTFQGLGALKSLKMQRNG 250
Query: 306 NLDSIDQXXXXXXXXXXXXXXXXXAFSLTP---LGTLKCDRLDLSGNNFSNIDSVAFKSL 362
+D +T G L L LS N + I A++
Sbjct: 251 VTKLMDGAFWGLSNMEVLQLDHNNLTEITKGWLYGLLMLRELHLSQNAINRISPDAWE-- 308
Query: 363 FSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLK 421
F KL +++L N L +D +F+ L + I N + + F+G T+LK++ L+
Sbjct: 309 FCQKLSELDLTFNHLSRLDDSSFLGLSLLNALHIGNN-KVSYIADCAFRGLTSLKTLDLR 367
Query: 422 GNSLS----HLEASHFPLERISFLDLSDNPLHCDCNXXXXXXXXXX----XXKSTMETTT 473
N +S + + L+R+ L L N + + M +
Sbjct: 368 NNEISWTIEDMSGAFSGLDRLRQLILQGNRIRSITKKAFAGLDTLEHLDLSGNAIMSLQS 427
Query: 474 VAY-EMTSNTSISPGTTT-----EAQRVDRIIKNNHSLTIVLNNLKCSSPPDIKGLEVKA 527
A+ +M + T++ + + + + + N+ + V N C+ P +KG +
Sbjct: 428 NAFSQMKKLQQLHLNTSSLLCDCQLRWLPQWVAENNFQSFV--NASCAHPQLLKGRSIFT 485
Query: 528 VPENSVHCE 536
V + C+
Sbjct: 486 VSPDGFVCD 494
>UNIPROTKB|F1MG02 [details] [associations]
symbol:ECM2 "Extracellular matrix protein 2" species:9913
"Bos taurus" [GO:0070052 "collagen V binding" evidence=IEA]
[GO:0030198 "extracellular matrix organization" evidence=IEA]
[GO:0010811 "positive regulation of cell-substrate adhesion"
evidence=IEA] [GO:0008201 "heparin binding" evidence=IEA]
[GO:0005614 "interstitial matrix" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR001007 Pfam:PF00093 PROSITE:PS01208
PROSITE:PS50184 PROSITE:PS51450 SMART:SM00214 GO:GO:0030198
GO:GO:0008201 GO:GO:0010811 GeneTree:ENSGT00700000104006
GO:GO:0005614 IPI:IPI00692442 OMA:AVWSPKP EMBL:DAAA02024048
EMBL:DAAA02024049 Ensembl:ENSBTAT00000015726 Uniprot:F1MG02
Length = 679
Score = 197 (74.4 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 76/272 (27%), Positives = 117/272 (43%)
Query: 23 PSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSFYIELRSLDLS 82
PS C + + SC A L +P PE+ ++ L +N I+++ + L LDLS
Sbjct: 298 PSMCSLSYKTI--SCISADLTQIPPLTAPEITSLELIDNSITSIPDEAFNGLNLERLDLS 355
Query: 83 VNKINV--LGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKT 140
N I +G F++ L+ LN+ N + + + L+ELK ++ NK+ VI++
Sbjct: 356 KNNITSSGIGPKAFKFLKNLMRLNMDGNNLVTIPSELPSTLEELK---INENKLQVIDEE 412
Query: 141 AFRDTLHLELLILSFNNITYFE-DSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSL 199
+ D L L L NN++ +S F LKSL L+L N+ +P LP S+
Sbjct: 413 SLSDLNQLVTLELEGNNLSETNVNSLAFKPLKSLSYLRLGRNKFRIIPQG----LP-ASI 467
Query: 200 HYLYLNENLIETVLDNSFPFTLT-NLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXX 258
LYL N IE + + SF T N+ L + L
Sbjct: 468 EELYLENNQIEEITEISFNHTRKINVIGLRYNKIEENRIAPLAWINQENLESIDLSYNKL 527
Query: 259 XAIPTKQLSKLSALVNLDLSGNNFSNIDSVAF 290
+P+ L K +LV+L L GN I F
Sbjct: 528 YHVPS-YLPK--SLVHLVLIGNQIERIPGYVF 556
Score = 130 (50.8 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 61/235 (25%), Positives = 97/235 (41%)
Query: 75 ELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEI--SALSKDTFKGLKELKTLDLSYN 132
E+ SL+L N I + F N L L++S N I S + FK LK L L++ N
Sbjct: 325 EITSLELIDNSITSIPDEAFNGLN-LERLDLSKNNITSSGIGPKAFKFLKNLMRLNMDGN 383
Query: 133 KISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLS 192
+ I + TL E L ++ N + D E S L L L+L+ N + + N L+
Sbjct: 384 NLVTI-PSELPSTL--EELKINENKLQVI-DEESLSDLNQLVTLELEGNNLSETNVNSLA 439
Query: 193 NLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXX 252
P +SL YL L N ++ P ++ L+ + +
Sbjct: 440 FKPLKSLSYLRLGRNKFR-IIPQGLPASIEELYLENNQIEEITEISFNHTRKINVIGLRY 498
Query: 253 XXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLV--KINLIP 305
P +++ + L ++DLS N ++ S KSL L L+ +I IP
Sbjct: 499 NKIEENRIAPLAWINQEN-LESIDLSYNKLYHVPSYLPKSLVHLVLIGNQIERIP 552
>RGD|71066 [details] [associations]
symbol:Lrrn3 "leucine rich repeat neuronal 3" species:10116
"Rattus norvegicus" [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030131 "clathrin adaptor complex" evidence=IDA] [GO:0032403
"protein complex binding" evidence=IDA] InterPro:IPR001611
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060 RGD:71066
GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0032403 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0001934 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0030131
GeneTree:ENSGT00690000102097 HOGENOM:HOG000252914 HOVERGEN:HBG052361
CTD:54674 OrthoDB:EOG4MGS6W EMBL:AF291437 EMBL:BC081791
IPI:IPI00192491 PIR:JC7763 RefSeq:NP_110483.1 UniGene:Rn.39124
ProteinModelPortal:Q9ESY6 STRING:Q9ESY6 PRIDE:Q9ESY6
Ensembl:ENSRNOT00000008655 GeneID:81514 KEGG:rno:81514
UCSC:RGD:71066 eggNOG:NOG294135 InParanoid:Q9ESY6 NextBio:615003
Genevestigator:Q9ESY6 GermOnline:ENSRNOG00000006368 Uniprot:Q9ESY6
Length = 707
Score = 203 (76.5 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 70/238 (29%), Positives = 122/238 (51%)
Query: 8 IFLILALTKL-----NKAICPSRCQC-----FDQK---LEAS---CTDAGLEVVPIQLNP 51
+ L LA+T L K CP C C F + +EAS C D GL P +L
Sbjct: 10 VLLGLAITALVQAGDKKVDCPQLCTCEIRPWFTPRSIYMEASTVDCNDLGLLNFPARLPA 69
Query: 52 EVQTIILRENRISNVHYTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEIS 111
+ Q ++L+ N I+ + ++ F + L LDLS N ++ + + N + ++LL++ + N+++
Sbjct: 70 DTQILLLQTNNIARIEHSTDFPVNLTGLDLSQNNLSSVTNINVQKMSQLLSVYLEENKLT 129
Query: 112 ALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLK 171
L + GL L+ L +++N +S I+ AF +L L L+ N + +S+ F +L
Sbjct: 130 ELPEKCLYGLSNLQELYVNHNLLSAISPGAFVGLHNLLRLHLNSNRLQMI-NSKWFEALP 188
Query: 172 SLRILKLDNNQILDVPNNVLSNLPHQSLHYLYL-NENLIETVLDNSFPFTLTNLHTLA 228
+L IL L +N IL + + ++ P L L + NL E V D++ L NL +++
Sbjct: 189 NLEILMLGDNPILRIKD--MNFQPLLKLRSLVIAGINLTE-VPDDAL-VGLENLESIS 242
Score = 180 (68.4 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 88/336 (26%), Positives = 129/336 (38%)
Query: 123 ELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQ 182
E T+D N + ++N A R ++L+L NNI E S F +L L L N
Sbjct: 49 EASTVDC--NDLGLLNFPA-RLPADTQILLLQTNNIARIEHSTDFPV--NLTGLDLSQNN 103
Query: 183 ILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXX 242
+ V N + + L +YL EN + T L + L+NL L +
Sbjct: 104 LSSVTNINVQKM--SQLLSVYLEENKL-TELPEKCLYGLSNLQELYVNHNLLSAISPGAF 160
Query: 243 VTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
V L L I +K L L L L N I + F+ L L+ + I
Sbjct: 161 VGLHNLLRLHLNSNRLQMINSKWFEALPNLEILMLGDNPILRIKDMNFQPLLKLRSLVIA 220
Query: 303 LIPNLDSIDQXXXXXXXXXXXXXXXXXAFSLTPLGTLK----CDRLDLSGNNFSNIDSVA 358
I NL + + P L+ LDL+ N + I
Sbjct: 221 GI-NLTEVPDDALVGLENLESISFYDNRLNKVPQVALQKAVNLKFLDLNKNPINRIRRGD 279
Query: 359 FKSLFSLKLVKINLIPNLDSIDQRAFVDNI-QLETVIINENMNLKQLPSKLFQGNTNLKS 417
F ++ LK + IN +P L SID A VDN+ L + N L + F L+S
Sbjct: 280 FSNMLHLKELGINNMPELVSIDSLA-VDNLPDLRKIEATNNPRLSYIHPNAFFRLPKLES 338
Query: 418 VSLKGNSLSHL-EASHFPLERISFLDLSDNPLHCDC 452
+ L N+LS L + L + + + NP+ CDC
Sbjct: 339 LMLNSNALSALYHGTIESLPNLKEISIHSNPIRCDC 374
Score = 40 (19.1 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 510 NNLKCSSPPDIKGLEVKAV 528
++L C PP+ +G V+ V
Sbjct: 392 DSLFCVDPPEFQGQNVRQV 410
>UNIPROTKB|Q9H3W5 [details] [associations]
symbol:LRRN3 "Leucine-rich repeat neuronal protein 3"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0032403 "protein complex binding" evidence=IEA]
InterPro:IPR001611 InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450
SMART:SM00060 GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0001934 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0030131
HOGENOM:HOG000252914 HOVERGEN:HBG052361 EMBL:AF134481 EMBL:AB060967
EMBL:AY358280 EMBL:CR457397 EMBL:AL442092 EMBL:BC035133
IPI:IPI00465126 RefSeq:NP_001093128.1 RefSeq:NP_001093130.1
RefSeq:NP_060804.3 UniGene:Hs.3781 ProteinModelPortal:Q9H3W5
SMR:Q9H3W5 STRING:Q9H3W5 DMDM:74761421 PRIDE:Q9H3W5 DNASU:54674
Ensembl:ENST00000308478 Ensembl:ENST00000422987
Ensembl:ENST00000451085 GeneID:54674 KEGG:hsa:54674 UCSC:uc003vfs.4
CTD:54674 GeneCards:GC07P110731 HGNC:HGNC:17200 neXtProt:NX_Q9H3W5
PharmGKB:PA30468 InParanoid:Q9H3W5 OMA:RWINMNK OrthoDB:EOG4MGS6W
PhylomeDB:Q9H3W5 GenomeRNAi:54674 NextBio:57220 ArrayExpress:Q9H3W5
Bgee:Q9H3W5 CleanEx:HS_LRRN3 Genevestigator:Q9H3W5 Uniprot:Q9H3W5
Length = 708
Score = 203 (76.5 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 82/321 (25%), Positives = 145/321 (45%)
Query: 8 IFLILALTKLNKAI-----CPSRCQC-----FDQK---LEAS---CTDAGLEVVPIQLNP 51
+ L LA+T L +A+ CP C C F + +EAS C D GL P +L
Sbjct: 10 VLLGLAITTLVQAVDKKVDCPRLCTCEIRPWFTPRSIYMEASTVDCNDLGLLTFPARLPA 69
Query: 52 EVQTIILRENRISNVHYTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEIS 111
Q ++L+ N I+ + Y+ F + L LDLS N ++ + + N + +LL++ + N+++
Sbjct: 70 NTQILLLQTNNIAKIEYSTDFPVNLTGLDLSQNNLSSVTNINVKKMPQLLSVYLEENKLT 129
Query: 112 ALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLK 171
L + L L+ L +++N +S I+ AF +L L L+ N + +S+ F +L
Sbjct: 130 ELPEKCLSELSNLQELYINHNLLSTISPGAFIGLHNLLRLHLNSNRLQMI-NSKWFDALP 188
Query: 172 SLRILKLDNNQILDVPNNVLSNLPHQSLHYLYL-NENLIETVLDNSFPFTLTNLHTLALX 230
+L IL + N I+ + + ++ P +L L + NL E + DN+ L NL +++
Sbjct: 189 NLEILMIGENPIIRIKD--MNFKPLINLRSLVIAGINLTE-IPDNAL-VGLENLESISFY 244
Query: 231 XXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGN-NFSNIDSVA 289
+ L I S + L L ++ +IDS+A
Sbjct: 245 DNRLIKVPHVALQKVVNLKFLDLNKNPINRIRRGDFSNMLHLKELGINNMPELISIDSLA 304
Query: 290 FKSLFSLKLVKINLIPNLDSI 310
+L L+ ++ P L I
Sbjct: 305 VDNLPDLRKIEATNNPRLSYI 325
Score = 180 (68.4 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 89/337 (26%), Positives = 133/337 (39%)
Query: 123 ELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQ 182
E T+D N + ++ A R + ++L+L NNI E S F +L L L N
Sbjct: 49 EASTVDC--NDLGLLTFPA-RLPANTQILLLQTNNIAKIEYSTDFPV--NLTGLDLSQNN 103
Query: 183 ILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXX 242
+ V N + +P L +YL EN + T L L+NL L +
Sbjct: 104 LSSVTNINVKKMPQ--LLSVYLEENKL-TELPEKCLSELSNLQELYINHNLLSTISPGAF 160
Query: 243 VTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLK---LV 299
+ L L I +K L L L + N I + FK L +L+ +
Sbjct: 161 IGLHNLLRLHLNSNRLQMINSKWFDALPNLEILMIGENPIIRIKDMNFKPLINLRSLVIA 220
Query: 300 KINL--IPNLDSIDQXXXXXXXXXXXXXXXXXAFSLTPLGTLKCDRLDLSGNNFSNIDSV 357
INL IP+ + +L + LK LDL+ N + I
Sbjct: 221 GINLTEIPDNALVGLENLESISFYDNRLIKVPHVALQKVVNLKF--LDLNKNPINRIRRG 278
Query: 358 AFKSLFSLKLVKINLIPNLDSIDQRAFVDNI-QLETVIINENMNLKQLPSKLFQGNTNLK 416
F ++ LK + IN +P L SID A VDN+ L + N L + F L+
Sbjct: 279 DFSNMLHLKELGINNMPELISIDSLA-VDNLPDLRKIEATNNPRLSYIHPNAFFRLPKLE 337
Query: 417 SVSLKGNSLSHL-EASHFPLERISFLDLSDNPLHCDC 452
S+ L N+LS L + L + + + NP+ CDC
Sbjct: 338 SLMLNSNALSALYHGTIESLPNLKEISIHSNPIRCDC 374
Score = 40 (19.1 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 510 NNLKCSSPPDIKGLEVKAV 528
++L C PP+ +G V+ V
Sbjct: 392 DSLFCVDPPEFQGQNVRQV 410
>RGD|620810 [details] [associations]
symbol:Rtn4r "reticulon 4 receptor" species:10116 "Rattus
norvegicus" [GO:0004872 "receptor activity" evidence=TAS]
[GO:0005783 "endoplasmic reticulum" evidence=IEA;ISO] [GO:0005886
"plasma membrane" evidence=IEA;ISO] [GO:0007409 "axonogenesis"
evidence=IEA;ISO] [GO:0009986 "cell surface" evidence=IEA;ISO]
[GO:0031225 "anchored to membrane" evidence=IEA] [GO:0050771
"negative regulation of axonogenesis" evidence=TAS]
InterPro:IPR001611 PROSITE:PS51450 RGD:620810 GO:GO:0005783
GO:GO:0005886 GO:GO:0009986 GO:GO:0031225 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0004872 GO:GO:0007409 InterPro:IPR000372 SMART:SM00013
GO:GO:0050771 GeneTree:ENSGT00690000101803 HOGENOM:HOG000116109
HOVERGEN:HBG063707 CTD:65078 KO:K16659 OrthoDB:EOG4MGS7M
EMBL:AY028438 EMBL:AF462390 IPI:IPI00197503 RefSeq:NP_446065.1
UniGene:Rn.229952 PDB:3KJ4 PDBsum:3KJ4 ProteinModelPortal:Q99M75
SMR:Q99M75 MINT:MINT-243866 STRING:Q99M75
Ensembl:ENSRNOT00000051037 GeneID:113912 KEGG:rno:113912
InParanoid:Q99M75 EvolutionaryTrace:Q99M75 NextBio:618010
Genevestigator:Q99M75 GermOnline:ENSRNOG00000030920 Uniprot:Q99M75
Length = 473
Score = 194 (73.4 bits), Expect = 3.6e-12, P = 3.6e-12
Identities = 73/231 (31%), Positives = 102/231 (44%)
Query: 22 CPSRCQCFDQ-KLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSFYI--ELRS 78
CP C C+++ K+ SC GL+ VP + Q I L NRIS V SF L
Sbjct: 27 CPGACVCYNEPKVTTSCPQQGLQAVPTGIPASSQRIFLHGNRISYVP-AASFQSCRNLTI 85
Query: 79 LDLSVNKINVLGSHNFEYQNKLLNLNISYN-EISALSKDTFKGLKELKTLDLSYNKISVI 137
L L N + + + F L L++S N ++ + TF+GL L TL L + +
Sbjct: 86 LWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLRVVDPTTFRGLGHLHTLHLDRCGLQEL 145
Query: 138 NKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQ 197
FR L+ L L NN+ D+ F L +L L L N+I VP + L H
Sbjct: 146 GPGLFRGLAALQYLYLQDNNLQALPDNT-FRDLGNLTHLFLHGNRIPSVPEHAFRGL-H- 202
Query: 198 SLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTL 248
SL L L++N + V ++F L L TL L V LR+L
Sbjct: 203 SLDRLLLHQNHVARVHPHAFR-DLGRLMTLYLFANNLSMLPAEVLVPLRSL 252
Score = 120 (47.3 bits), Expect = 0.00050, P = 0.00050
Identities = 33/106 (31%), Positives = 55/106 (51%)
Query: 76 LRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKIS 135
L+ L L N + L + F L +L + N I ++ + F+GL L L L N ++
Sbjct: 156 LQYLYLQDNNLQALPDNTFRDLGNLTHLFLHGNRIPSVPEHAFRGLHSLDRLLLHQNHVA 215
Query: 136 VINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNN 181
++ AFRD L L L NN++ +E+ L+SL+ L+L++N
Sbjct: 216 RVHPHAFRDLGRLMTLYLFANNLSMLP-AEVLVPLRSLQYLRLNDN 260
>ZFIN|ZDB-GENE-040310-1 [details] [associations]
symbol:rtn4r "reticulon 4 receptor" species:7955
"Danio rerio" [GO:0048936 "peripheral nervous system neuron
axonogenesis" evidence=IGI;IMP] [GO:0007411 "axon guidance"
evidence=IGI;IMP] InterPro:IPR001611 PROSITE:PS51450
ZFIN:ZDB-GENE-040310-1 GO:GO:0007411 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
SMART:SM00013 GO:GO:0048936 HOGENOM:HOG000116109 HOVERGEN:HBG063707
CTD:65078 EMBL:AY257178 IPI:IPI00490487 RefSeq:NP_982345.1
UniGene:Dr.30202 ProteinModelPortal:Q6X3Y5 SMR:Q6X3Y5 GeneID:403306
KEGG:dre:403306 InParanoid:Q6X3Y5 NextBio:20816915 Uniprot:Q6X3Y5
Length = 479
Score = 194 (73.4 bits), Expect = 3.7e-12, P = 3.7e-12
Identities = 68/228 (29%), Positives = 109/228 (47%)
Query: 5 LTCIFLILALTKLNKAICPSRCQCFDQ-KLEASCTDAGLEVVPIQLNPEVQTIILRENRI 63
L C+ L L + + CP++C C+ + K +C GL +P ++ Q I L+ N++
Sbjct: 11 LLCLMFWLNLVPVINS-CPAKCVCYSEPKATVACQQQGLFSIPTEIPVRSQRIFLQSNKL 69
Query: 64 SNVHYT-LSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNE-ISALSKDTFKGL 121
+ V T S L L + N I+ + + F +L L+I N + +S F+GL
Sbjct: 70 TVVRSTSFSSVHNLTVLWMYSNNISHIEAGAFYGLERLEELDIGDNSNLRIISPTAFRGL 129
Query: 122 KELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNN 181
+L TL L +S + FR L+ L L NN+ + + F L +L L L NN
Sbjct: 130 TKLHTLHLHRCGLSELPVGVFRGLFSLQYLYLQDNNLLALHE-DTFLDLANLTYLFLHNN 188
Query: 182 QILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLAL 229
+I V +++L L + L L L++N I V +F L+ L TL L
Sbjct: 189 KIKVVTDHMLRGLVN--LDRLLLHQNRIVHVQQQAFN-DLSKLTTLFL 233
Score = 148 (57.2 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 59/218 (27%), Positives = 97/218 (44%)
Query: 68 YTLSFYIELRS--LDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELK 125
+++ I +RS + L NK+ V+ S +F + L L + N IS + F GL+ L+
Sbjct: 49 FSIPTEIPVRSQRIFLQSNKLTVVRSTSFSSVHNLTVLWMYSNNISHIEAGAFYGLERLE 108
Query: 126 TLDLSYNK-ISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQIL 184
LD+ N + +I+ TAFR L L L ++ +F L SL+ L L +N +L
Sbjct: 109 ELDIGDNSNLRIISPTAFRGLTKLHTLHLHRCGLSELPVG-VFRGLFSLQYLYLQDNNLL 167
Query: 185 DVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVT 244
+ + +L + L YL+L+ N I+ V D+ L NL L L
Sbjct: 168 ALHEDTFLDLAN--LTYLFLHNNKIKVVTDHMLR-GLVNLDRLLLHQNRIVHVQQQAFND 224
Query: 245 LRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNF 282
L L + + ++ L +L L L+GN +
Sbjct: 225 LSKLTTLFLFFNNLTMLTGESMNPLVSLQYLRLNGNQW 262
Score = 121 (47.7 bits), Expect = 0.00040, P = 0.00040
Identities = 48/178 (26%), Positives = 80/178 (44%)
Query: 55 TII-LRENRISNVHYTLSFYIE-LRSLDLSVNK-INVLGSHNFEYQNKLLNLNISYNEIS 111
T++ + N IS++ + +E L LD+ N + ++ F KL L++ +S
Sbjct: 84 TVLWMYSNNISHIEAGAFYGLERLEELDIGDNSNLRIISPTAFRGLTKLHTLHLHRCGLS 143
Query: 112 ALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLK 171
L F+GL L+ L L N + +++ F D +L L L N I D + L
Sbjct: 144 ELPVGVFRGLFSLQYLYLQDNNLLALHEDTFLDLANLTYLFLHNNKIKVVTD-HMLRGLV 202
Query: 172 SLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLAL 229
+L L L N+I+ V ++L + +L+ N NL T+L L +L L L
Sbjct: 203 NLDRLLLHQNRIVHVQQQAFNDLSKLTTLFLFFN-NL--TMLTGESMNPLVSLQYLRL 257
>FB|FBgn0013272 [details] [associations]
symbol:Gp150 "Gp150" species:7227 "Drosophila melanogaster"
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0007185
"transmembrane receptor protein tyrosine phosphatase signaling
pathway" evidence=IDA] [GO:0048749 "compound eye development"
evidence=IMP] [GO:0002121 "inter-male aggressive behavior"
evidence=IMP] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
GO:GO:0005886 InterPro:IPR003591 SMART:SM00369 GO:GO:0002121
ChiTaRS:ANPEP GO:GO:0048749 GO:GO:0007185 FlyBase:FBgn0013272
EMBL:BT015195 ProteinModelPortal:Q6AWQ3 STRING:Q6AWQ3 PRIDE:Q6AWQ3
InParanoid:Q6AWQ3 ArrayExpress:Q6AWQ3 Bgee:Q6AWQ3 Uniprot:Q6AWQ3
Length = 1076
Score = 199 (75.1 bits), Expect = 4.0e-12, P = 4.0e-12
Identities = 112/518 (21%), Positives = 206/518 (39%)
Query: 22 CPSRCQC---FDQKLEASCT--DAGLEVVPIQLNPEVQTIILRENRI---SNVHYTLSFY 73
CP CQC + L A+C+ D G++ + V T + + I N L
Sbjct: 258 CPRFCQCARNVNSYLVATCSRLDMGIQKFGSDITDLVVTNVGPKYPILMGPNFFQNLGLK 317
Query: 74 IELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNK 133
+ S+ ++ + L + F N+L +N++ ++ ++ DTF G K+L+ L +S N
Sbjct: 318 -NVASIKIANCTLEYLHAEAFHGLNELYAVNLTDVGLAIINPDTFVGNKKLRMLTISGND 376
Query: 134 ISVINKTAFR-DTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLS 192
+SV++ + + +E L S NN+ + + FS L ++ + L N + +P
Sbjct: 377 LSVMSSIHYLLKSSSIEELDFSRNNLMEL-NPKAFSHLSNVVYINLSQNSLKKLPEKAFE 435
Query: 193 NLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXX 252
+ L L L+ N + P + N TL++ + L
Sbjct: 436 KVT--LLEELDLSYNSL-----TELPRDIFNGTTLSILHLKYNTFNGDLHFGTKDLQQLD 488
Query: 253 XXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSID- 311
+ K+ L NL+L GN I +F +L +L+ + ++ I +LD I
Sbjct: 489 LSFNSIVQVHHSMFDKMPGLTNLNLKGNGIKKIQPDSFLTLKNLRHIDLS-INDLDQISG 547
Query: 312 QXXXXXXXXXXXXXXXXXAFSLTPL-------GTLKCDRLDLSGNNFSNIDSVAFKSLFS 364
S P G LD+S + AF ++
Sbjct: 548 MLFFKNSELDVIRLNDNPRLSQLPTDGFLSYSGEFTVYYLDISNCAIGPLGHKAFSTMPH 607
Query: 365 LKLVKINLIPNLDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNS 424
L +K+ N++ + + F + +L + ++ N+ + ++ +F N L +SL GN
Sbjct: 608 LTTLKLAW-NNINHLPREIFTELHKLIDLDLSNNL-ITRMDDLIFMDNGELTKLSLAGNP 665
Query: 425 LSHLEASHF-PLERISFLDLSDNPLHCDCNXXXXXXXXXXXXKSTMETTTVAYEMTSNTS 483
+S L F PL ++ LD++D C+ K + + ++ + N
Sbjct: 666 ISRLSVRLFLPLHQLRCLDVND----CELTTLLSDRDLGAGYK--IFDSLRSFNASGNL- 718
Query: 484 ISPGTTTEAQRVDRIIKNNHSLTIVLNNLKCSSPPDIK 521
I T+ + + KN SL I N LKC+ PD +
Sbjct: 719 IKKITSEDVKS----FKNLRSLDITNNPLKCT--PDFQ 750
Score = 127 (49.8 bits), Expect = 0.00026, P = 0.00026
Identities = 92/373 (24%), Positives = 147/373 (39%)
Query: 76 LRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKIS 135
L LDLS N + L F L L++ YN + D G K+L+ LDLS+N I
Sbjct: 440 LEELDLSYNSLTELPRDIFN-GTTLSILHLKYNTFNG---DLHFGTKDLQQLDLSFNSIV 495
Query: 136 VINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLP 195
++ + F L L L N I + F +LK+LR + L N LD + +L
Sbjct: 496 QVHHSMFDKMPGLTNLNLKGNGIKKIQPDS-FLTLKNLRHIDLSIND-LDQISGMLF-FK 552
Query: 196 HQSLHYLYLNEN--LIETVLDNSFPFTLT-NLHTLALXXXXXXXXXXXXXVTLRTLHXXX 252
+ L + LN+N L + D ++ ++ L + T+ L
Sbjct: 553 NSELDVIRLNDNPRLSQLPTDGFLSYSGEFTVYYLDISNCAIGPLGHKAFSTMPHLTTLK 612
Query: 253 XXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKI--NLIPNLD-S 309
+P + ++L L++LDLS N + +D + F L + + N I L
Sbjct: 613 LAWNNINHLPREIFTELHKLIDLDLSNNLITRMDDLIFMDNGELTKLSLAGNPISRLSVR 672
Query: 310 IDQXXXXXXXXXXXXXXXXXAFSLTPLGT-LKC-DRL---DLSGNNFSNIDSVAFKSLFS 364
+ S LG K D L + SGN I S KS +
Sbjct: 673 LFLPLHQLRCLDVNDCELTTLLSDRDLGAGYKIFDSLRSFNASGNLIKKITSEDVKSFKN 732
Query: 365 LKLVKINLIPNLDSIDQRAFVDNIQLETVIINENMNLKQLP--SKLFQGNT--NLKSVSL 420
L+ + I P + D + F+ + L+ M K+LP + L T L++++
Sbjct: 733 LRSLDITNNPLKCTPDFQEFISYVTLQM-----QMTPKRLPVLANLEDDATIVQLETLAQ 787
Query: 421 KG-NSLSHLEASH 432
G +SL+H H
Sbjct: 788 AGWSSLAHEVCKH 800
>UNIPROTKB|F1NJ43 [details] [associations]
symbol:NYX "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005622 "intracellular" evidence=IEA] [GO:0007601
"visual perception" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005622 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 OMA:NISFITP GeneTree:ENSGT00690000101803
EMBL:AADN02011030 IPI:IPI00576878 ProteinModelPortal:F1NJ43
Ensembl:ENSGALT00000030326 Uniprot:F1NJ43
Length = 466
Score = 198 (74.8 bits), Expect = 4.1e-12, Sum P(2) = 4.1e-12
Identities = 72/217 (33%), Positives = 105/217 (48%)
Query: 1 MNYFLTCIFLILA-LTKLNKAIC-----PSRCQCFDQKL-EASCTDAGLEVVP--IQLNP 51
+ Y T F L L KL+ A C P R L E C +P I+
Sbjct: 116 IRYLHTRTFTALRRLVKLDLADCNLFNIPDRIFIELPSLQELFCFQNNFRRIPGAIRGME 175
Query: 52 EVQTIILRENRISNVHY-TLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEI 110
+ + L NRI V Y +L +L+ L+L N+INV+ F+ K+ L ++ N I
Sbjct: 176 NLTHVYLERNRIEAVAYNSLQGLTKLKYLNLQDNRINVVHERAFQGCRKMEYLYLNDNLI 235
Query: 111 SALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSL 170
S L +++F GL+ LK L+L N + ++ T FRD + LE+L L N I Y E+ F +L
Sbjct: 236 SELPENSFDGLRCLKMLNLGGNFLRNVSNTWFRDLVELEVLYLDRNRINYIEEGA-FENL 294
Query: 171 KSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNEN 207
SL L L++N + +P +V P L LYL N
Sbjct: 295 TSLVSLHLNSNNLTTLPFSVFQ--PVYFLGRLYLFRN 329
Score = 168 (64.2 bits), Expect = 9.8e-09, Sum P(2) = 9.8e-09
Identities = 63/234 (26%), Positives = 96/234 (41%)
Query: 72 FYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSY 131
F E S++L N I L F L +L++++N IS ++ FKGL L L +++
Sbjct: 53 FPCEASSINLDKNSIKFLSERAFGTLPSLKSLSLNHNNISFITPGAFKGLPSLTELKMAH 112
Query: 132 NK-ISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNV 190
N+ I ++ F L L L+ N+ D IF L SL+ L N +P +
Sbjct: 113 NEYIRYLHTRTFTALRRLVKLDLADCNLFNIPD-RIFIELPSLQELFCFQNNFRRIPGAI 171
Query: 191 --LSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTL 248
+ NL H +YL N IE V NS LT L L L R +
Sbjct: 172 RGMENLTH-----VYLERNRIEAVAYNSLQ-GLTKLKYLNLQDNRINVVHERAFQGCRKM 225
Query: 249 HXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
+P L L L+L GN N+ + F+ L L+++ ++
Sbjct: 226 EYLYLNDNLISELPENSFDGLRCLKMLNLGGNFLRNVSNTWFRDLVELEVLYLD 279
Score = 137 (53.3 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 75/287 (26%), Positives = 113/287 (39%)
Query: 176 LKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXX 235
+ LD N I + LP SL L LN N I + +F L +L L +
Sbjct: 60 INLDKNSIKFLSERAFGTLP--SLKSLSLNHNNISFITPGAFK-GLPSLTELKMAHNEYI 116
Query: 236 XXXXXXXVT-LRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLF 294
T LR L IP + +L +L L NNF I A + +
Sbjct: 117 RYLHTRTFTALRRLVKLDLADCNLFNIPDRIFIELPSLQELFCFQNNFRRIPG-AIRGME 175
Query: 295 SLKLVKI--NLIP-----NLDSIDQXXXXXXXXXXXXXXXXXAFSLTPLGTLKCDRLDLS 347
+L V + N I +L + + AF G K + L L+
Sbjct: 176 NLTHVYLERNRIEAVAYNSLQGLTKLKYLNLQDNRINVVHERAFQ----GCRKMEYLYLN 231
Query: 348 GNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNLKQLPS 406
N S + +F L LK+ +NL N L ++ F D ++LE + ++ N + +
Sbjct: 232 DNLISELPENSFDGLRCLKM--LNLGGNFLRNVSNTWFRDLVELEVLYLDRN-RINYIEE 288
Query: 407 KLFQGNTNLKSVSLKGNSLSHLEASHF-PLERISFLDLSDNPLHCDC 452
F+ T+L S+ L N+L+ L S F P+ + L L NP CDC
Sbjct: 289 GAFENLTSLVSLHLNSNNLTTLPFSVFQPVYFLGRLYLFRNPWECDC 335
Score = 125 (49.1 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 35/119 (29%), Positives = 60/119 (50%)
Query: 89 LGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHL 148
LG E+ + ++N+ N I LS+ F L LK+L L++N IS I AF+ L
Sbjct: 46 LGQIPSEFPCEASSINLDKNSIKFLSERAFGTLPSLKSLSLNHNNISFITPGAFKGLPSL 105
Query: 149 ELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNEN 207
L ++ N + + F++L+ L L L + + ++P+ + LP SL L+ +N
Sbjct: 106 TELKMAHNEYIRYLHTRTFTALRRLVKLDLADCNLFNIPDRIFIELP--SLQELFCFQN 162
Score = 38 (18.4 bits), Expect = 4.1e-12, Sum P(2) = 4.1e-12
Identities = 5/21 (23%), Positives = 14/21 (66%)
Query: 508 VLNNLKCSSPPDIKGLEVKAV 528
++ ++ C+SP + G+++ V
Sbjct: 349 LVRDIPCASPSSVAGIDLMDV 369
>RGD|1561726 [details] [associations]
symbol:Lrrc55 "leucine rich repeat containing 55" species:10116
"Rattus norvegicus" [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR001611 PROSITE:PS51450
RGD:1561726 GO:GO:0016021 GO:GO:0005886 InterPro:IPR000483
SMART:SM00082 GO:GO:0005216 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 HOGENOM:HOG000113369 GeneTree:ENSGT00700000104451
CTD:219527 eggNOG:NOG244842 HOVERGEN:HBG081932 OrthoDB:EOG4NS3BS
EMBL:BC099134 IPI:IPI00362839 RefSeq:NP_001116447.1
UniGene:Rn.209245 ProteinModelPortal:Q4KLL3
Ensembl:ENSRNOT00000031745 GeneID:311171 KEGG:rno:311171
UCSC:RGD:1561726 InParanoid:Q4KLL3 NextBio:663112
Genevestigator:Q4KLL3 Uniprot:Q4KLL3
Length = 311
Score = 188 (71.2 bits), Expect = 4.3e-12, P = 4.3e-12
Identities = 57/183 (31%), Positives = 93/183 (50%)
Query: 5 LTCIFLILALTKLNK---AICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILREN 61
L +F +LA ++ A CP C C +Q ++ C++ L VP L + + + L N
Sbjct: 31 LLLVFFLLAAGVMHSDAGASCPVLCTCRNQVVD--CSNQRLFSVPPDLPMDTRNLSLAHN 88
Query: 62 RISNVH--YTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFK 119
RI+ V Y L+ Y+ELR LDL N + L F + +L +L++SYN +S + D F+
Sbjct: 89 RIAAVPPGY-LTCYMELRVLDLRNNSLMELPPGLFLHAKRLAHLDLSYNNLSHVPADMFR 147
Query: 120 GLKELKTLDLSYNK-ISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKL 178
L +DLS+N + ++ AF+ +HL L LS+ + + E L L L++
Sbjct: 148 EAHGLVHIDLSHNPWLRRVHPQAFQGLVHLRDLDLSYGGLAFLS-LEALEGLPGLVTLQI 206
Query: 179 DNN 181
N
Sbjct: 207 GGN 209
>MGI|MGI:1915522 [details] [associations]
symbol:Lingo1 "leucine rich repeat and Ig domain containing
1" species:10090 "Mus musculus" [GO:0005154 "epidermal growth
factor receptor binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0021954 "central nervous system neuron
development" evidence=IMP;IDA] [GO:0031175 "neuron projection
development" evidence=IDA] [GO:0043491 "protein kinase B signaling
cascade" evidence=IDA] [GO:0048715 "negative regulation of
oligodendrocyte differentiation" evidence=IMP] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:1915522 GO:GO:0016021 GO:GO:0005886
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0043491 GO:GO:0031175
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GO:GO:0021954 HSSP:P21809 GO:GO:0048715
GeneTree:ENSGT00690000101682 HOGENOM:HOG000246971 OrthoDB:EOG40S0F8
CTD:84894 HOVERGEN:HBG057546 EMBL:AK027262 EMBL:AK163538
EMBL:BC052384 EMBL:BC065696 EMBL:AY324324 IPI:IPI00134200
RefSeq:NP_851419.1 UniGene:Mm.246605 ProteinModelPortal:Q9D1T0
SMR:Q9D1T0 IntAct:Q9D1T0 STRING:Q9D1T0 PhosphoSite:Q9D1T0
PaxDb:Q9D1T0 PRIDE:Q9D1T0 Ensembl:ENSMUST00000053568
Ensembl:ENSMUST00000114247 GeneID:235402 KEGG:mmu:235402
InParanoid:Q9D1T0 ChiTaRS:LINGO1 NextBio:382644 Bgee:Q9D1T0
Genevestigator:Q9D1T0 Uniprot:Q9D1T0
Length = 614
Score = 203 (76.5 bits), Expect = 4.3e-12, Sum P(2) = 4.3e-12
Identities = 78/299 (26%), Positives = 120/299 (40%)
Query: 8 IFLILALTKLNKAI-CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNV 66
+ L+L A CP RC+C Q C VP + E + + L +NRI +
Sbjct: 21 LLLVLGSVLSGSATGCPPRCECSAQDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTL 80
Query: 67 HYT-LSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELK 125
+ + + L L+L+ N ++ + F L L + N + + F GL L
Sbjct: 81 NQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLT 140
Query: 126 TLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILD 185
LD+S NKI ++ F+D +L+ L + N++ Y FS L SL L L+ +
Sbjct: 141 KLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISH-RAFSGLNSLEQLTLEKCNLTS 199
Query: 186 VPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTL 245
+P LS+L H L L L I + D SF L L L + +
Sbjct: 200 IPTEALSHL-H-GLIVLRLRHLNINAIRDYSFK-RLYRLKVLEISHWPYLDTMTPNCLYG 256
Query: 246 RTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLI 304
L A+P + L L L+LS N I+ L L+L +I L+
Sbjct: 257 LNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIGTIEGSMLHEL--LRLQEIQLV 313
Score = 195 (73.7 bits), Expect = 3.4e-11, Sum P(2) = 3.4e-11
Identities = 85/308 (27%), Positives = 135/308 (43%)
Query: 123 ELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQ 182
E + LDL N+I +N+ F HLE L L+ N ++ E F++L +LR L L +N+
Sbjct: 66 ETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGA-FNNLFNLRTLGLRSNR 124
Query: 183 ILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXX 242
+ +P V + L +L L ++EN I +LD F L NL +L +
Sbjct: 125 LKLIPLGVFTGL--SNLTKLDISENKIVILLDYMFQ-DLYNLKSLEVGDNDLVYISHRAF 181
Query: 243 VTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
L +L +IPT+ LS L L+ L L N + I +FK L+ LK+++I+
Sbjct: 182 SGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEIS 241
Query: 303 LIPNLDSIDQXXXXXXXXXXXXXXXXXAFSLTPLGT--LKCDR-LDLSGNNFSNIDSVAF 359
P LD++ ++ L L R L+LS N I+
Sbjct: 242 HWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIGTIEGSML 301
Query: 360 KSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSV 418
L L+L +I L+ L ++ AF L + ++ N L L F NL+++
Sbjct: 302 HEL--LRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQ-LTTLEESAFHSVGNLETL 358
Query: 419 SLKGNSLS 426
L N L+
Sbjct: 359 ILDSNPLA 366
Score = 133 (51.9 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 70/308 (22%), Positives = 126/308 (40%)
Query: 150 LLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLI 209
LL L N I E F+S L L+L+ N + V +NL +L L L N +
Sbjct: 69 LLDLGKNRIKTLNQDE-FASFPHLEELELNENIVSAVEPGAFNNL--FNLRTLGLRSNRL 125
Query: 210 ETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKL 269
+ + F L+NL L + L L I + S L
Sbjct: 126 KLIPLGVFT-GLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGL 184
Query: 270 SALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQXXXXXXXXXXXXXXXXX 329
++L L L N ++I + A L L ++++ + N+++I
Sbjct: 185 NSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHL-NINAIRDYSFKRLYRLKVLEISHW 243
Query: 330 AF--SLTP--LGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFV 385
+ ++TP L L L ++ N + + +A + L L+ + ++ P + +I+
Sbjct: 244 PYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNP-IGTIEGSMLH 302
Query: 386 DNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHF-PLERISFLDLS 444
+ ++L+ + + L + F+G L+ +++ GN L+ LE S F + + L L
Sbjct: 303 ELLRLQEIQLVGGQ-LAVVEPYAFRGLNYLRVLNVSGNQLTTLEESAFHSVGNLETLILD 361
Query: 445 DNPLHCDC 452
NPL CDC
Sbjct: 362 SNPLACDC 369
Score = 37 (18.1 bits), Expect = 4.3e-12, Sum P(2) = 4.3e-12
Identities = 6/17 (35%), Positives = 11/17 (64%)
Query: 514 CSSPPDIKGLEVKAVPE 530
C++P ++G E K P+
Sbjct: 390 CATPEFVQGKEFKDFPD 406
>UNIPROTKB|G3V881 [details] [associations]
symbol:Lingo1 "Leucine rich repeat neuronal 6A, isoform
CRA_a" species:10116 "Rattus norvegicus" [GO:0005154 "epidermal
growth factor receptor binding" evidence=IEA] [GO:0021954 "central
nervous system neuron development" evidence=IEA] [GO:0031175
"neuron projection development" evidence=IEA] [GO:0043491 "protein
kinase B signaling cascade" evidence=IEA] [GO:0048715 "negative
regulation of oligodendrocyte differentiation" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 RGD:1308668 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 EMBL:CH473975
GeneTree:ENSGT00690000101682 CTD:84894 RefSeq:NP_001094192.1
UniGene:Rn.20269 ProteinModelPortal:G3V881 SMR:G3V881 PRIDE:G3V881
Ensembl:ENSRNOT00000023084 GeneID:315691 KEGG:rno:315691
NextBio:669664 Uniprot:G3V881
Length = 620
Score = 203 (76.5 bits), Expect = 4.5e-12, Sum P(2) = 4.5e-12
Identities = 78/299 (26%), Positives = 120/299 (40%)
Query: 8 IFLILALTKLNKAI-CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNV 66
+ L+L A CP RC+C Q C VP + E + + L +NRI +
Sbjct: 27 LLLVLGSVLSGSATGCPPRCECSAQDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTL 86
Query: 67 HYT-LSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELK 125
+ + + L L+L+ N ++ + F L L + N + + F GL L
Sbjct: 87 NQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLT 146
Query: 126 TLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILD 185
LD+S NKI ++ F+D +L+ L + N++ Y FS L SL L L+ +
Sbjct: 147 KLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISH-RAFSGLNSLEQLTLEKCNLTS 205
Query: 186 VPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTL 245
+P LS+L H L L L I + D SF L L L + +
Sbjct: 206 IPTEALSHL-H-GLIVLRLRHLNINAIRDYSFK-RLYRLKVLEISHWPYLDTMTPNCLYG 262
Query: 246 RTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLI 304
L A+P + L L L+LS N I+ L L+L +I L+
Sbjct: 263 LNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIGTIEGSMLHEL--LRLQEIQLV 319
Score = 195 (73.7 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 85/308 (27%), Positives = 135/308 (43%)
Query: 123 ELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQ 182
E + LDL N+I +N+ F HLE L L+ N ++ E F++L +LR L L +N+
Sbjct: 72 ETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGA-FNNLFNLRTLGLRSNR 130
Query: 183 ILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXX 242
+ +P V + L +L L ++EN I +LD F L NL +L +
Sbjct: 131 LKLIPLGVFTGL--SNLTKLDISENKIVILLDYMFQ-DLYNLKSLEVGDNDLVYISHRAF 187
Query: 243 VTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
L +L +IPT+ LS L L+ L L N + I +FK L+ LK+++I+
Sbjct: 188 SGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEIS 247
Query: 303 LIPNLDSIDQXXXXXXXXXXXXXXXXXAFSLTPLGT--LKCDR-LDLSGNNFSNIDSVAF 359
P LD++ ++ L L R L+LS N I+
Sbjct: 248 HWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIGTIEGSML 307
Query: 360 KSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSV 418
L L+L +I L+ L ++ AF L + ++ N L L F NL+++
Sbjct: 308 HEL--LRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQ-LTTLEESAFHSVGNLETL 364
Query: 419 SLKGNSLS 426
L N L+
Sbjct: 365 ILDSNPLA 372
Score = 133 (51.9 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 70/308 (22%), Positives = 126/308 (40%)
Query: 150 LLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLI 209
LL L N I E F+S L L+L+ N + V +NL +L L L N +
Sbjct: 75 LLDLGKNRIKTLNQDE-FASFPHLEELELNENIVSAVEPGAFNNL--FNLRTLGLRSNRL 131
Query: 210 ETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKL 269
+ + F L+NL L + L L I + S L
Sbjct: 132 KLIPLGVFT-GLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGL 190
Query: 270 SALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQXXXXXXXXXXXXXXXXX 329
++L L L N ++I + A L L ++++ + N+++I
Sbjct: 191 NSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHL-NINAIRDYSFKRLYRLKVLEISHW 249
Query: 330 AF--SLTP--LGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFV 385
+ ++TP L L L ++ N + + +A + L L+ + ++ P + +I+
Sbjct: 250 PYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNP-IGTIEGSMLH 308
Query: 386 DNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHF-PLERISFLDLS 444
+ ++L+ + + L + F+G L+ +++ GN L+ LE S F + + L L
Sbjct: 309 ELLRLQEIQLVGGQ-LAVVEPYAFRGLNYLRVLNVSGNQLTTLEESAFHSVGNLETLILD 367
Query: 445 DNPLHCDC 452
NPL CDC
Sbjct: 368 SNPLACDC 375
Score = 37 (18.1 bits), Expect = 4.5e-12, Sum P(2) = 4.5e-12
Identities = 6/17 (35%), Positives = 11/17 (64%)
Query: 514 CSSPPDIKGLEVKAVPE 530
C++P ++G E K P+
Sbjct: 396 CATPEFVQGKEFKDFPD 412
>ZFIN|ZDB-GENE-080327-14 [details] [associations]
symbol:lrrtm4l2 "leucine rich repeat transmembrane
neuronal 4 like 2" species:7955 "Danio rerio" [GO:0005515 "protein
binding" evidence=IPI] [GO:0042802 "identical protein binding"
evidence=IDA] InterPro:IPR001611 PROSITE:PS51450
ZFIN:ZDB-GENE-080327-14 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0042802
InterPro:IPR000372 SMART:SM00013 HOVERGEN:HBG052362 EMBL:CU468765
IPI:IPI00876678 UniGene:Dr.110767 IntAct:A8BB35 STRING:A8BB35
Uniprot:A8BB35
Length = 445
Score = 192 (72.6 bits), Expect = 5.2e-12, P = 5.2e-12
Identities = 81/307 (26%), Positives = 121/307 (39%)
Query: 5 LTCIFL---ILALTKLNKAICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILREN 61
L+C L +L L + +CP C+C + K+ C G + VP ++ Q + LR N
Sbjct: 10 LSCFLLHASVLLLLSKGERMCPVSCRC-EGKI-VYCESGGFQDVPENISLGCQGLSLRYN 67
Query: 62 RISNV-HYTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKG 120
+ + Y + +L L L N I+ + F+ +L L +S N+I+ L TF+
Sbjct: 68 SLLLLLPYQFAHLNQLVWLYLDHNSISTVDRLAFQGLRRLKELILSSNKIAQLQNGTFET 127
Query: 121 LKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDN 180
+ L+ LDLSYN++ + F L+ L L NNI F +SL L L
Sbjct: 128 VPNLRNLDLSYNQMQDLVPGHFHGLRKLQNLHLRSNNIRSIP-VRTFMECRSLEFLDLGY 186
Query: 181 NQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXX 240
N++ + L L L+L N + FP L NL L L
Sbjct: 187 NRLRTITRTTFLGLLR--LTELHLEHNQFSRINFFLFP-RLLNLQALYLQWNRIRTVVQG 243
Query: 241 XXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVK 300
T TL + L L L+L N SN+ S S+
Sbjct: 244 SPWTWHTLQKLDLSGNEIQILDPAIFRCLPNLHTLNLESNKISNVSLEVVSSWISIST-- 301
Query: 301 INLIPNL 307
INL N+
Sbjct: 302 INLAGNI 308
>UNIPROTKB|Q86WK6 [details] [associations]
symbol:AMIGO1 "Amphoterin-induced protein 1" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0030424 "axon"
evidence=IEA] [GO:0007156 "homophilic cell adhesion" evidence=ISS]
[GO:0007157 "heterophilic cell-cell adhesion" evidence=ISS]
[GO:0007413 "axonal fasciculation" evidence=ISS] [GO:0042552
"myelination" evidence=ISS] [GO:0050772 "positive regulation of
axonogenesis" evidence=ISS] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS51450 EMBL:AY237007
GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0030424 InterPro:IPR003599 SMART:SM00409 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0042552
GO:GO:0050772 GO:GO:0007157 InterPro:IPR000372 SMART:SM00013
EMBL:AK295678 EMBL:AL355145 EMBL:BC040879 EMBL:AB032989
IPI:IPI00410140 RefSeq:NP_065754.2 UniGene:Hs.726479
ProteinModelPortal:Q86WK6 SMR:Q86WK6 STRING:Q86WK6
PhosphoSite:Q86WK6 DMDM:68052342 PaxDb:Q86WK6 PRIDE:Q86WK6
DNASU:57463 Ensembl:ENST00000369862 Ensembl:ENST00000369864
GeneID:57463 KEGG:hsa:57463 UCSC:uc001dxx.4 CTD:57463
GeneCards:GC01M110046 HGNC:HGNC:20824 HPA:HPA046152
neXtProt:NX_Q86WK6 PharmGKB:PA142672625 eggNOG:NOG146733
HOGENOM:HOG000231327 HOVERGEN:HBG080231 InParanoid:Q86WK6
OMA:SVELKVY OrthoDB:EOG4TB4BP PhylomeDB:Q86WK6 ChiTaRS:AMIGO1
GenomeRNAi:57463 NextBio:63666 Bgee:Q86WK6 CleanEx:HS_AMIGO1
Genevestigator:Q86WK6 GermOnline:ENSG00000181754 GO:GO:0007413
GO:GO:0007156 InterPro:IPR013106 Pfam:PF07686 Uniprot:Q86WK6
Length = 493
Score = 193 (73.0 bits), Expect = 5.9e-12, Sum P(2) = 5.9e-12
Identities = 62/204 (30%), Positives = 99/204 (48%)
Query: 10 LILALTKLNKAI--CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVH 67
L+ + + +A+ CP+ C C L SC+ L VP L + L N +S +
Sbjct: 20 LLFEVARAGRAVVSCPAACLCASNIL--SCSKQQLPNVPHSLPSYTALLDLSHNNLSRLR 77
Query: 68 --YTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELK 125
+T + +L SL LS N +N + S F L L++S N++ L + F L+ L+
Sbjct: 78 AEWTPTRLTQLHSLLLSHNHLNFISSEAFSPVPNLRYLDLSSNQLRTLDEFLFSDLQVLE 137
Query: 126 TLDLSYNKISVINKTAFRDTLHLELLILSFNNITYF--EDSEIFSSLKSLRILKLDNNQI 183
L L N I +++ AF D L+ L LS N I+ F E + + L L +L L +N++
Sbjct: 138 VLLLYNNHIMAVDRCAFDDMAQLQKLYLSQNQISRFPLELVKEGAKLPKLTLLDLSSNKL 197
Query: 184 LDVPNNVLSNLPHQSLHYLYLNEN 207
++P L LP + LYL+ N
Sbjct: 198 KNLPLPDLQKLPAWIKNGLYLHNN 221
Score = 137 (53.3 bits), Expect = 9.5e-06, Sum P(2) = 9.5e-06
Identities = 46/157 (29%), Positives = 83/157 (52%)
Query: 60 ENRISNVHYTLSFYIELRSLDLSVNKINVLGSHNFEYQ-NKLLNLNISYNEISALSKDTF 118
+ ++ NV ++L Y L LDLS N ++ L + + +L +L +S+N ++ +S + F
Sbjct: 49 KQQLPNVPHSLPSYTAL--LDLSHNNLSRLRAEWTPTRLTQLHSLLLSHNHLNFISSEAF 106
Query: 119 KGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKL 178
+ L+ LDLS N++ +++ F D LE+L+L +NN D F + L+ L L
Sbjct: 107 SPVPNLRYLDLSSNQLRTLDEFLFSDLQVLEVLLL-YNNHIMAVDRCAFDDMAQLQKLYL 165
Query: 179 DNNQILDVPNNVL---SNLPHQSLHYLYLNENLIETV 212
NQI P ++ + LP +L L L+ N ++ +
Sbjct: 166 SQNQISRFPLELVKEGAKLPKLTL--LDLSSNKLKNL 200
Score = 43 (20.2 bits), Expect = 5.9e-12, Sum P(2) = 5.9e-12
Identities = 13/52 (25%), Positives = 21/52 (40%)
Query: 555 VICILMYFIYRKRALWKNKINRNLKHQSSYVDNCMNSHPTPILMLYSTGDSD 606
V+ +L+Y W + + HQ + + M S TP + GD D
Sbjct: 384 VVLVLIYLYLTPCRCWCRGVEKPSSHQGDSLSSSMLS-TTPNHDPMAGGDKD 434
>RGD|727797 [details] [associations]
symbol:Rtn4rl2 "reticulon 4 receptor-like 2" species:10116
"Rattus norvegicus" [GO:0004872 "receptor activity"
evidence=ISO;ISS] [GO:0007166 "cell surface receptor signaling
pathway" evidence=NAS] [GO:0009897 "external side of plasma
membrane" evidence=IDA] [GO:0009986 "cell surface" evidence=ISO]
[GO:0045121 "membrane raft" evidence=IDA] [GO:0046658 "anchored to
plasma membrane" evidence=ISO;ISS] RGD:727797 GO:GO:0009897
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0004872 GO:GO:0045121 GO:GO:0007166
InterPro:IPR000372 SMART:SM00013 GO:GO:0046658
GeneTree:ENSGT00690000101803 HOGENOM:HOG000116109
HOVERGEN:HBG063707 OrthoDB:EOG4FXR7G CTD:349667 KO:K16661
OMA:WFREARV EMBL:AF532860 IPI:IPI00331880 RefSeq:NP_852045.1
UniGene:Rn.162683 ProteinModelPortal:Q80WD1 PRIDE:Q80WD1
Ensembl:ENSRNOT00000038250 GeneID:311169 KEGG:rno:311169
UCSC:RGD:727797 InParanoid:Q80WD1 NextBio:663102
Genevestigator:Q80WD1 GermOnline:ENSRNOG00000021513 Uniprot:Q80WD1
Length = 420
Score = 195 (73.7 bits), Expect = 6.9e-12, Sum P(2) = 6.9e-12
Identities = 59/208 (28%), Positives = 103/208 (49%)
Query: 7 CIFL-ILALTKLNKAICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISN 65
C+ L +LAL + + CP C C+ SC VP+ L P Q + L+ N I +
Sbjct: 16 CLLLTLLALPPVTPS-CPMLCTCYSSPPTVSCQANNFSSVPLSLPPSTQRLFLQNNLIRS 74
Query: 66 VHYTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNE-ISALSKDTFKGLKEL 124
+ +F L +L L N ++ + F + L L++ N + +L DTF+GL+ L
Sbjct: 75 LRPG-TFGPNLLTLWLFSNNLSTIYPGTFRHLQALEELDLGDNRHLRSLEPDTFQGLERL 133
Query: 125 KTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQIL 184
++L L ++S + FR + L+ L L N++ + +D ++F+ L +L L L N++
Sbjct: 134 QSLHLYRCQLSSLPGNIFRGLVSLQYLYLQENSLLHLQD-DLFADLANLSHLFLHGNRLR 192
Query: 185 DVPNNVLSNLPHQSLHYLYLNENLIETV 212
+ +V L SL L L+ N ++ V
Sbjct: 193 LLTEHVFRGLG--SLDRLLLHGNRLQGV 218
Score = 129 (50.5 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 58/203 (28%), Positives = 82/203 (40%)
Query: 103 LNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFE 162
L + N I +L TF G L TL L N +S I FR LE L L N
Sbjct: 65 LFLQNNLIRSLRPGTF-G-PNLLTLWLFSNNLSTIYPGTFRHLQALEELDLGDNRHLRSL 122
Query: 163 DSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLT 222
+ + F L+ L+ L L Q+ +P N+ L SL YLYL EN + + D+ F L
Sbjct: 123 EPDTFQGLERLQSLHLYRCQLSSLPGNIFRGLV--SLQYLYLQENSLLHLQDDLFA-DLA 179
Query: 223 NLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNF 282
NL L L L +L + LS L L L N+
Sbjct: 180 NLSHLFLHGNRLRLLTEHVFRGLGSLDRLLLHGNRLQGVHRAAFHGLSRLTILYLFNNSL 239
Query: 283 SNIDSVAFKSLFSLKLVKINLIP 305
+++ A L +L+ +++N P
Sbjct: 240 ASLPGEALADLPALEFLRLNANP 262
Score = 37 (18.1 bits), Expect = 6.9e-12, Sum P(2) = 6.9e-12
Identities = 4/19 (21%), Positives = 15/19 (78%)
Query: 510 NNLKCSSPPDIKGLEVKAV 528
+++ C++PP+ +G +++ +
Sbjct: 284 SDVTCATPPERQGRDLRTL 302
>UNIPROTKB|Q6WCD5 [details] [associations]
symbol:TLR4 "Toll-like receptor" species:9913 "Bos taurus"
[GO:0071260 "cellular response to mechanical stimulus"
evidence=IEA] [GO:0071223 "cellular response to lipoteichoic acid"
evidence=IEA] [GO:0070434 "positive regulation of
nucleotide-binding oligomerization domain containing 2 signaling
pathway" evidence=IEA] [GO:0070430 "positive regulation of
nucleotide-binding oligomerization domain containing 1 signaling
pathway" evidence=IEA] [GO:0070374 "positive regulation of ERK1 and
ERK2 cascade" evidence=IEA] [GO:0070373 "negative regulation of
ERK1 and ERK2 cascade" evidence=IEA] [GO:0060907 "positive
regulation of macrophage cytokine production" evidence=IEA]
[GO:0060729 "intestinal epithelial structure maintenance"
evidence=IEA] [GO:0051770 "positive regulation of nitric-oxide
synthase biosynthetic process" evidence=IEA] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=IEA] [GO:0050829 "defense response to Gram-negative
bacterium" evidence=IEA] [GO:0050727 "regulation of inflammatory
response" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0046696 "lipopolysaccharide receptor
complex" evidence=IEA] [GO:0046330 "positive regulation of JNK
cascade" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045429 "positive regulation of nitric oxide biosynthetic
process" evidence=IEA] [GO:0045416 "positive regulation of
interleukin-8 biosynthetic process" evidence=IEA] [GO:0045359
"positive regulation of interferon-beta biosynthetic process"
evidence=IEA] [GO:0045348 "positive regulation of MHC class II
biosynthetic process" evidence=IEA] [GO:0045084 "positive
regulation of interleukin-12 biosynthetic process" evidence=IEA]
[GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB
cascade" evidence=IEA] [GO:0042535 "positive regulation of tumor
necrosis factor biosynthetic process" evidence=IEA] [GO:0042346
"positive regulation of NF-kappaB import into nucleus"
evidence=IEA] [GO:0042116 "macrophage activation" evidence=IEA]
[GO:0032760 "positive regulation of tumor necrosis factor
production" evidence=IEA] [GO:0032757 "positive regulation of
interleukin-8 production" evidence=IEA] [GO:0032755 "positive
regulation of interleukin-6 production" evidence=IEA] [GO:0032735
"positive regulation of interleukin-12 production" evidence=IEA]
[GO:0032733 "positive regulation of interleukin-10 production"
evidence=IEA] [GO:0032732 "positive regulation of interleukin-1
production" evidence=IEA] [GO:0032729 "positive regulation of
interferon-gamma production" evidence=IEA] [GO:0032728 "positive
regulation of interferon-beta production" evidence=IEA] [GO:0032727
"positive regulation of interferon-alpha production" evidence=IEA]
[GO:0032722 "positive regulation of chemokine production"
evidence=IEA] [GO:0032720 "negative regulation of tumor necrosis
factor production" evidence=IEA] [GO:0032715 "negative regulation
of interleukin-6 production" evidence=IEA] [GO:0032707 "negative
regulation of interleukin-23 production" evidence=IEA] [GO:0032700
"negative regulation of interleukin-17 production" evidence=IEA]
[GO:0032689 "negative regulation of interferon-gamma production"
evidence=IEA] [GO:0032609 "interferon-gamma production"
evidence=IEA] [GO:0032497 "detection of lipopolysaccharide"
evidence=IEA] [GO:0030890 "positive regulation of B cell
proliferation" evidence=IEA] [GO:0010572 "positive regulation of
platelet activation" evidence=IEA] [GO:0009897 "external side of
plasma membrane" evidence=IEA] [GO:0007252 "I-kappaB
phosphorylation" evidence=IEA] [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0002537 "nitric oxide production
involved in inflammatory response" evidence=IEA] [GO:0001875
"lipopolysaccharide receptor activity" evidence=IEA] [GO:0000187
"activation of MAPK activity" evidence=IEA] [GO:0045087 "innate
immune response" evidence=IEA] [GO:0050707 "regulation of cytokine
secretion" evidence=IEA] [GO:0034142 "toll-like receptor 4
signaling pathway" evidence=IEA] [GO:0004888 "transmembrane
signaling receptor activity" evidence=IEA] [GO:0002755
"MyD88-dependent toll-like receptor signaling pathway"
evidence=IEA] InterPro:IPR000157 InterPro:IPR001611
InterPro:IPR017241 InterPro:IPR027168 Pfam:PF01582
PIRSF:PIRSF037595 PROSITE:PS50104 PROSITE:PS51450 SMART:SM00255
GO:GO:0048471 GO:GO:0005887 GO:GO:0009897 GO:GO:0032689
GO:GO:0050829 GO:GO:0043123 GO:GO:0070374 GO:GO:0046330
GO:GO:0045944 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0045087 GO:GO:0032722 GO:GO:0032755
GO:GO:0000187 GO:GO:0050727 GO:GO:0032720 GO:GO:0032715
GO:GO:0030890 GO:GO:0051092 GO:GO:0070373 GO:GO:0032757
GO:GO:0071260 GO:GO:0045429 GO:GO:0042116 GO:GO:0004888
GO:GO:0045416 GO:GO:0032729 GO:GO:0032760 GO:GO:0046696
GO:GO:0042535 GO:GO:0045348 GO:GO:0032735 GO:GO:0042346
GO:GO:0051770 GO:GO:0071223 GeneTree:ENSGT00700000104185
GO:GO:0032733 GO:GO:0060907 GO:GO:0032727 GO:GO:0002537
GO:GO:0032728 GO:GO:0007252 GO:GO:0032609 SUPFAM:SSF52200
GO:GO:0032700 GO:GO:0045084 GO:GO:0001875 GO:GO:0032497
GO:GO:0010572 GO:GO:0032707 GO:GO:0060729 GO:GO:0045359
HOVERGEN:HBG018823 PANTHER:PTHR24365:SF9 IPI:IPI00713344
UniGene:Bt.9030 GO:GO:0032732 GO:GO:0070430 GO:GO:0070434
EMBL:DAAA02024656 EMBL:AY297040 EMBL:DQ839567 SMR:Q6WCD5
STRING:Q6WCD5 Ensembl:ENSBTAT00000008190 InParanoid:Q6WCD5
OMA:NDVITMG Uniprot:Q6WCD5
Length = 841
Score = 167 (63.8 bits), Expect = 7.5e-12, Sum P(2) = 7.5e-12
Identities = 65/206 (31%), Positives = 98/206 (47%)
Query: 11 ILALTKLNKAICPSRC--QCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHY 68
++A +L A+ P+ C L D ++VVP N Q + L +I +
Sbjct: 1 MMARARLAAALIPATAILSC----LRTESWDPCVQVVP---NISYQCMELNLYKIPD--- 50
Query: 69 TLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLD 128
+ I + LDLS N + LGSHNF +L L++S EI + DTF+GL L TL
Sbjct: 51 --NIPISTKMLDLSFNYLRHLGSHNFSSFPELQVLDLSRCEIKIIEDDTFQGLNHLSTLI 108
Query: 129 LSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQI--LDV 186
L+ N I + AF L+ L+ N+ D I LK+L+ L + +N I +
Sbjct: 109 LTGNPIQSLAWGAFSGLSSLQKLVAVETNLVSLNDFPI-GHLKNLKELNVAHNFIHSFKL 167
Query: 187 PNNVLSNLPHQSLHYLYLNENLIETV 212
P SNLP+ L +L L+ N I+ +
Sbjct: 168 PE-YFSNLPN--LEHLDLSNNKIQNI 190
Score = 142 (55.0 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 47/144 (32%), Positives = 71/144 (49%)
Query: 76 LRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEI-SALSKDTFKGLKELKTLDLSYNKI 134
LR LD+S I ++ F L L ++ N + L D F L L LDLS ++
Sbjct: 449 LRYLDISYTNIRIVFHGIFTGLVSLQTLKMAGNSFQNNLLPDIFTELTNLTVLDLSKCQL 508
Query: 135 SVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNL 194
+ +TAF L++L +S N + D+ ++ L SLRIL N+I+ L NL
Sbjct: 509 EQVAQTAFHSLSSLQVLNMSHNKLLSL-DTFLYEPLHSLRILDCSFNRIMASKEQELQNL 567
Query: 195 PHQSLHYLYLNENLIETVLDN-SF 217
P +SL +L L +N V ++ SF
Sbjct: 568 P-RSLTWLNLTQNAFACVCEHQSF 590
Score = 137 (53.3 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 50/183 (27%), Positives = 87/183 (47%)
Query: 51 PEVQTIILRENRISN---VHYTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISY 107
P +Q + L+ N +S +T L+ LDLS N + LGS NF +L +L+ +
Sbjct: 373 PSLQYLDLKRNHLSFKGCCSHTDFGTTNLKHLDLSFNDVITLGS-NFMGLEQLEHLDFQH 431
Query: 108 NEISALSK-DTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEI 166
+ + ++ F L+ L+ LD+SY I ++ F + L+ L ++ N+ +I
Sbjct: 432 STLKQINAFSAFLSLRNLRYLDISYTNIRIVFHGIFTGLVSLQTLKMAGNSFQNNLLPDI 491
Query: 167 FSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHT 226
F+ L +L +L L Q+ V +L SL L ++ N + + LD F LH+
Sbjct: 492 FTELTNLTVLDLSKCQLEQVAQTAFHSL--SSLQVLNMSHNKLLS-LDT---FLYEPLHS 545
Query: 227 LAL 229
L +
Sbjct: 546 LRI 548
Score = 97 (39.2 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 46/187 (24%), Positives = 79/187 (42%)
Query: 128 DLSYNKISVINKTAFRDTLHL--ELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILD 185
++SY + +N D + + ++L LSFN + + S FSS L++L L +I
Sbjct: 35 NISYQCME-LNLYKIPDNIPISTKMLDLSFNYLRHL-GSHNFSSFPELQVLDLSRCEIKI 92
Query: 186 VPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTL 245
+ ++ L H S L L N I+++ +F L++L L L
Sbjct: 93 IEDDTFQGLNHLST--LILTGNPIQSLAWGAFS-GLSSLQKLVAVETNLVSLNDFPIGHL 149
Query: 246 RTLHXXXXXXXXXXAIPTKQ-LSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLI 304
+ L + + S L L +LDLS N NI K L + L+ ++L
Sbjct: 150 KNLKELNVAHNFIHSFKLPEYFSNLPNLEHLDLSNNKIQNIYYEDVKVLHQMPLLNLSLD 209
Query: 305 PNLDSID 311
+L+ +D
Sbjct: 210 LSLNPLD 216
Score = 77 (32.2 bits), Expect = 7.5e-12, Sum P(2) = 7.5e-12
Identities = 47/244 (19%), Positives = 88/244 (36%)
Query: 336 LGTLKCDRLDLSGNNFSNIDSV-AFKSLFSLKLVKINLIPNLDSIDQRAFVDNIQLETVI 394
+G + + LD + I++ AF SL +L+ + I+ N+ + F + L+T+
Sbjct: 419 MGLEQLEHLDFQHSTLKQINAFSAFLSLRNLRYLDISYT-NIRIVFHGIFTGLVSLQTLK 477
Query: 395 INENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHF-PLERISFLDLSDN------- 446
+ N L +F TNL + L L + + F L + L++S N
Sbjct: 478 MAGNSFQNNLLPDIFTELTNLTVLDLSKCQLEQVAQTAFHSLSSLQVLNMSHNKLLSLDT 537
Query: 447 ----PLHC----DCNXXXXXXXXXXXXKSTMETTTVAYEMTSNTSISPGTTTEAQRVDRI 498
PLH DC+ ++ + T +T N E Q +
Sbjct: 538 FLYEPLHSLRILDCSFNRIMASKEQELQNLPRSLTWL-NLTQNAF---ACVCEHQSFLQW 593
Query: 499 IKNNHSLTIVLNNLKCSSPPDIKGLEVKAVPENSVHCESNTMXXXXXXXXXXXXXGVICI 558
+K+ L + + C+ P D++ + V + + + GV+
Sbjct: 594 VKDQRQLLVGAEQMMCAEPLDMEDMPVLSFRNATCQLSKTIISVSVVTVLLVSVVGVLVY 653
Query: 559 LMYF 562
YF
Sbjct: 654 KFYF 657
Score = 62 (26.9 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 33/116 (28%), Positives = 54/116 (46%)
Query: 332 SLTPLGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQ-RAFVDNIQL 390
S T GT LDLS N+ + S F L L+ + L I+ AF+ L
Sbjct: 392 SHTDFGTTNLKHLDLSFNDVITLGS-NFMGLEQLEHLDFQH-STLKQINAFSAFLSLRNL 449
Query: 391 ETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSL-SHLEASHFP-LERISFLDLS 444
+ I+ N++ + +F G +L+++ + GNS ++L F L ++ LDLS
Sbjct: 450 RYLDISYT-NIRIVFHGIFTGLVSLQTLKMAGNSFQNNLLPDIFTELTNLTVLDLS 504
Score = 62 (26.9 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 29/117 (24%), Positives = 50/117 (42%)
Query: 336 LGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFVDNIQLETV-- 393
LG+L+ D + I+ F +LKL + D+ D F + QL ++
Sbjct: 320 LGSLQALLKDFRWQHLEIINC-DFDKFPALKLSSLKKFVFTDNKDISTFTE-FQLPSLQY 377
Query: 394 --IINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFPLERISFLDLSDNPL 448
+ +++ K S G TNLK + L N + L ++ LE++ LD + L
Sbjct: 378 LDLKRNHLSFKGCCSHTDFGTTNLKHLDLSFNDVITLGSNFMGLEQLEHLDFQHSTL 434
>UNIPROTKB|Q9GL65 [details] [associations]
symbol:TLR4 "Toll-like receptor 4" species:9913 "Bos
taurus" [GO:0046696 "lipopolysaccharide receptor complex"
evidence=ISS] [GO:0032497 "detection of lipopolysaccharide"
evidence=ISS] [GO:0001875 "lipopolysaccharide receptor activity"
evidence=ISS] [GO:0042116 "macrophage activation" evidence=ISS]
[GO:0045087 "innate immune response" evidence=IEA] [GO:0006954
"inflammatory response" evidence=IEA] [GO:0050829 "defense response
to Gram-negative bacterium" evidence=IEA] [GO:0050707 "regulation
of cytokine secretion" evidence=IEA] [GO:0034142 "toll-like
receptor 4 signaling pathway" evidence=IEA] [GO:0004888
"transmembrane signaling receptor activity" evidence=IEA]
[GO:0002755 "MyD88-dependent toll-like receptor signaling pathway"
evidence=IEA] InterPro:IPR000157 InterPro:IPR001611
InterPro:IPR017241 InterPro:IPR027168 Pfam:PF01582
PIRSF:PIRSF037595 PROSITE:PS50104 PROSITE:PS51450 SMART:SM00255
GO:GO:0006954 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0045087 GO:GO:0005622 GO:GO:0042116
GO:GO:0004888 GO:GO:0046696 SUPFAM:SSF52200 GO:GO:0001875
GO:GO:0032497 HOVERGEN:HBG018823 PANTHER:PTHR24365:SF9
EMBL:AF310952 EMBL:AY634630 EMBL:DQ839566 IPI:IPI00713344
RefSeq:NP_776623.5 UniGene:Bt.9030 ProteinModelPortal:Q9GL65
SMR:Q9GL65 STRING:Q9GL65 GeneID:281536 KEGG:bta:281536 CTD:7099
eggNOG:NOG249751 HOGENOM:HOG000037951 InParanoid:Q9GL65 KO:K10160
OrthoDB:EOG4P8FHQ NextBio:20805491 Uniprot:Q9GL65
Length = 841
Score = 167 (63.8 bits), Expect = 7.5e-12, Sum P(2) = 7.5e-12
Identities = 65/206 (31%), Positives = 98/206 (47%)
Query: 11 ILALTKLNKAICPSRC--QCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHY 68
++A +L A+ P+ C L D ++VVP N Q + L +I +
Sbjct: 1 MMARARLAAALIPATAILSC----LRTESWDPCVQVVP---NISYQCMELNLYKIPD--- 50
Query: 69 TLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLD 128
+ I + LDLS N + LGSHNF +L L++S EI + DTF+GL L TL
Sbjct: 51 --NIPISTKMLDLSFNYLRHLGSHNFSSFPELQVLDLSRCEIKIIEDDTFQGLNHLSTLI 108
Query: 129 LSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQI--LDV 186
L+ N I + AF L+ L+ N+ D I LK+L+ L + +N I +
Sbjct: 109 LTGNPIQSLAWGAFSGLSSLQKLVAVETNLVSLNDFPI-GHLKNLKELNVAHNFIHSFKL 167
Query: 187 PNNVLSNLPHQSLHYLYLNENLIETV 212
P SNLP+ L +L L+ N I+ +
Sbjct: 168 PE-YFSNLPN--LEHLDLSNNKIQNI 190
Score = 142 (55.0 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 47/144 (32%), Positives = 71/144 (49%)
Query: 76 LRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEI-SALSKDTFKGLKELKTLDLSYNKI 134
LR LD+S I ++ F L L ++ N + L D F L L LDLS ++
Sbjct: 449 LRYLDISYTNIRIVFHGIFTGLVSLQTLKMAGNSFQNNLLPDIFTELTNLTVLDLSKCQL 508
Query: 135 SVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNL 194
+ +TAF L++L +S N + D+ ++ L SLRIL N+I+ L NL
Sbjct: 509 EQVAQTAFHSLSSLQVLNMSHNKLLSL-DTFLYEPLHSLRILDCSFNRIMASKEQELQNL 567
Query: 195 PHQSLHYLYLNENLIETVLDN-SF 217
P +SL +L L +N V ++ SF
Sbjct: 568 P-RSLTWLNLTQNAFACVCEHQSF 590
Score = 137 (53.3 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 50/183 (27%), Positives = 87/183 (47%)
Query: 51 PEVQTIILRENRISN---VHYTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISY 107
P +Q + L+ N +S +T L+ LDLS N + LGS NF +L +L+ +
Sbjct: 373 PSLQYLDLKRNHLSFKGCCSHTDFGTTNLKHLDLSFNDVITLGS-NFMGLEQLEHLDFQH 431
Query: 108 NEISALSK-DTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEI 166
+ + ++ F L+ L+ LD+SY I ++ F + L+ L ++ N+ +I
Sbjct: 432 STLKQINAFSAFLSLRNLRYLDISYTNIRIVFHGIFTGLVSLQTLKMAGNSFQNNLLPDI 491
Query: 167 FSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHT 226
F+ L +L +L L Q+ V +L SL L ++ N + + LD F LH+
Sbjct: 492 FTELTNLTVLDLSKCQLEQVAQTAFHSL--SSLQVLNMSHNKLLS-LDT---FLYEPLHS 545
Query: 227 LAL 229
L +
Sbjct: 546 LRI 548
Score = 97 (39.2 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 46/187 (24%), Positives = 79/187 (42%)
Query: 128 DLSYNKISVINKTAFRDTLHL--ELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILD 185
++SY + +N D + + ++L LSFN + + S FSS L++L L +I
Sbjct: 35 NISYQCME-LNLYKIPDNIPISTKMLDLSFNYLRHL-GSHNFSSFPELQVLDLSRCEIKI 92
Query: 186 VPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTL 245
+ ++ L H S L L N I+++ +F L++L L L
Sbjct: 93 IEDDTFQGLNHLST--LILTGNPIQSLAWGAFS-GLSSLQKLVAVETNLVSLNDFPIGHL 149
Query: 246 RTLHXXXXXXXXXXAIPTKQ-LSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLI 304
+ L + + S L L +LDLS N NI K L + L+ ++L
Sbjct: 150 KNLKELNVAHNFIHSFKLPEYFSNLPNLEHLDLSNNKIQNIYYEDVKVLHQMPLLNLSLD 209
Query: 305 PNLDSID 311
+L+ +D
Sbjct: 210 LSLNPLD 216
Score = 77 (32.2 bits), Expect = 7.5e-12, Sum P(2) = 7.5e-12
Identities = 47/244 (19%), Positives = 88/244 (36%)
Query: 336 LGTLKCDRLDLSGNNFSNIDSV-AFKSLFSLKLVKINLIPNLDSIDQRAFVDNIQLETVI 394
+G + + LD + I++ AF SL +L+ + I+ N+ + F + L+T+
Sbjct: 419 MGLEQLEHLDFQHSTLKQINAFSAFLSLRNLRYLDISYT-NIRIVFHGIFTGLVSLQTLK 477
Query: 395 INENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHF-PLERISFLDLSDN------- 446
+ N L +F TNL + L L + + F L + L++S N
Sbjct: 478 MAGNSFQNNLLPDIFTELTNLTVLDLSKCQLEQVAQTAFHSLSSLQVLNMSHNKLLSLDT 537
Query: 447 ----PLHC----DCNXXXXXXXXXXXXKSTMETTTVAYEMTSNTSISPGTTTEAQRVDRI 498
PLH DC+ ++ + T +T N E Q +
Sbjct: 538 FLYEPLHSLRILDCSFNRIMASKEQELQNLPRSLTWL-NLTQNAF---ACVCEHQSFLQW 593
Query: 499 IKNNHSLTIVLNNLKCSSPPDIKGLEVKAVPENSVHCESNTMXXXXXXXXXXXXXGVICI 558
+K+ L + + C+ P D++ + V + + + GV+
Sbjct: 594 VKDQRQLLVGAEQMMCAEPLDMEDMPVLSFRNATCQLSKTIISVSVVTVLLVSVVGVLVY 653
Query: 559 LMYF 562
YF
Sbjct: 654 KFYF 657
Score = 62 (26.9 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 33/116 (28%), Positives = 54/116 (46%)
Query: 332 SLTPLGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQ-RAFVDNIQL 390
S T GT LDLS N+ + S F L L+ + L I+ AF+ L
Sbjct: 392 SHTDFGTTNLKHLDLSFNDVITLGS-NFMGLEQLEHLDFQH-STLKQINAFSAFLSLRNL 449
Query: 391 ETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSL-SHLEASHFP-LERISFLDLS 444
+ I+ N++ + +F G +L+++ + GNS ++L F L ++ LDLS
Sbjct: 450 RYLDISYT-NIRIVFHGIFTGLVSLQTLKMAGNSFQNNLLPDIFTELTNLTVLDLS 504
Score = 62 (26.9 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 29/117 (24%), Positives = 50/117 (42%)
Query: 336 LGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFVDNIQLETV-- 393
LG+L+ D + I+ F +LKL + D+ D F + QL ++
Sbjct: 320 LGSLQALLKDFRWQHLEIINC-DFDKFPALKLSSLKKFVFTDNKDISTFTE-FQLPSLQY 377
Query: 394 --IINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFPLERISFLDLSDNPL 448
+ +++ K S G TNLK + L N + L ++ LE++ LD + L
Sbjct: 378 LDLKRNHLSFKGCCSHTDFGTTNLKHLDLSFNDVITLGSNFMGLEQLEHLDFQHSTL 434
>MGI|MGI:1916925 [details] [associations]
symbol:Pxdn "peroxidasin homolog (Drosophila)" species:10090
"Mus musculus" [GO:0004601 "peroxidase activity" evidence=ISO]
[GO:0005201 "extracellular matrix structural constituent"
evidence=ISO] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
[GO:0005615 "extracellular space" evidence=ISO] [GO:0005783
"endoplasmic reticulum" evidence=ISO] [GO:0006979 "response to
oxidative stress" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0020037 "heme binding" evidence=ISO]
[GO:0030198 "extracellular matrix organization" evidence=ISO;IDA]
[GO:0031012 "extracellular matrix" evidence=ISO;IDA] [GO:0042744
"hydrogen peroxide catabolic process" evidence=ISO] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0055114 "oxidation-reduction
process" evidence=IEA;ISO] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR001007 InterPro:IPR002007 InterPro:IPR007110
InterPro:IPR010255 InterPro:IPR019791 Pfam:PF00093 Pfam:PF03098
PRINTS:PR00457 PROSITE:PS00436 PROSITE:PS01208 PROSITE:PS50184
PROSITE:PS50292 PROSITE:PS50835 PROSITE:PS51450 SMART:SM00214
MGI:MGI:1916925 GO:GO:0005783 GO:GO:0005615 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0046872 GO:GO:0005578 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0030198 GO:GO:0020037 GO:GO:0031012
GO:GO:0004601 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GO:GO:0042744 SUPFAM:SSF48113 PROSITE:PS00435
HSSP:P21809 GO:GO:0005201 Gene3D:1.10.640.10 eggNOG:NOG262194
GeneTree:ENSGT00550000074325 HOGENOM:HOG000016084
HOVERGEN:HBG108312 CTD:7837 OMA:EPVITWN OrthoDB:EOG4J1179
EMBL:AK142872 EMBL:AC159626 EMBL:AC165078 EMBL:BC112913
IPI:IPI00461384 RefSeq:NP_852060.2 UniGene:Mm.251774
ProteinModelPortal:Q3UQ28 SMR:Q3UQ28 PhosphoSite:Q3UQ28
PaxDb:Q3UQ28 PRIDE:Q3UQ28 Ensembl:ENSMUST00000122328 GeneID:69675
KEGG:mmu:69675 UCSC:uc007ngl.2 InParanoid:Q3UQ28 NextBio:330062
Bgee:Q3UQ28 CleanEx:MM_PXDN Genevestigator:Q3UQ28 Uniprot:Q3UQ28
Length = 1475
Score = 203 (76.5 bits), Expect = 7.7e-12, Sum P(2) = 7.7e-12
Identities = 57/165 (34%), Positives = 86/165 (52%)
Query: 22 CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSFYIELRSLD- 80
CPSRC CF + C LE VP + P+ + LR NRI + + LRSL+
Sbjct: 33 CPSRCLCF--RTTVRCMHLLLEAVPA-VAPQTSILDLRFNRIREIQP--GAFRRLRSLNT 87
Query: 81 --LSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVIN 138
L+ N+I + + FE L L + NEI ++ + FKGL L+ L L +N+I ++
Sbjct: 88 LLLNNNQIKKIPNGAFEDLENLKYLYLYKNEIQSIDRQAFKGLASLEQLYLHFNQIETLD 147
Query: 139 KTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQI 183
+F+ LE L L N IT+ FS L+S++ L+LD+N +
Sbjct: 148 PESFQHLPKLERLFLHNNRITHLVPGT-FSQLESMKRLRLDSNAL 191
Score = 141 (54.7 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 44/131 (33%), Positives = 62/131 (47%)
Query: 79 LDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVIN 138
LDL N+I + F L L ++ N+I + F+ L+ LK L L N+I I+
Sbjct: 64 LDLRFNRIREIQPGAFRRLRSLNTLLLNNNQIKKIPNGAFEDLENLKYLYLYKNEIQSID 123
Query: 139 KTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQS 198
+ AF+ LE L L FN I D E F L L L L NN+I + S L +S
Sbjct: 124 RQAFKGLASLEQLYLHFNQIETL-DPESFQHLPKLERLFLHNNRITHLVPGTFSQL--ES 180
Query: 199 LHYLYLNENLI 209
+ L L+ N +
Sbjct: 181 MKRLRLDSNAL 191
Score = 45 (20.9 bits), Expect = 7.7e-12, Sum P(2) = 7.7e-12
Identities = 22/95 (23%), Positives = 34/95 (35%)
Query: 514 CSSPPDIKGLEVKAVPENSVHCESNTMXXXXXXXXXXXXXGVICILMYFIYRKRALWKNK 573
C P I+G V + ++CE + V YF R K +
Sbjct: 219 CEYPRRIQGRSVATITPEELNCERPRITSEPQDADVTSGNTV-----YFTCRAEGNPKPE 273
Query: 574 IN--RNLKHQSSYVDNCMNSHPTPILMLYSTGDSD 606
I RN S D+ +N LM+ +T ++D
Sbjct: 274 IIWLRNNNELSMKTDSRLNLLDDGTLMIQNTQEAD 308
>UNIPROTKB|G3MXX5 [details] [associations]
symbol:RTN4R "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0009986 "cell surface" evidence=IEA] [GO:0007409
"axonogenesis" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005783 GO:GO:0005886
GO:GO:0009986 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007409 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101803 OMA:PLWAWLQ EMBL:DAAA02045821
Ensembl:ENSBTAT00000065527 Uniprot:G3MXX5
Length = 473
Score = 191 (72.3 bits), Expect = 7.7e-12, P = 7.7e-12
Identities = 72/233 (30%), Positives = 100/233 (42%)
Query: 20 AICPSRCQCFDQ-KLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSFYI--EL 76
A CP C C+ + K+ SC GL+ VP + Q + L NRI+ V SF L
Sbjct: 25 APCPGACVCYSEPKVTTSCPQQGLQAVPADIPAASQRVFLHGNRIAYVP-AASFRACRNL 83
Query: 77 RSLDLSVNKINVLGSHNFEYQNKLLNLNISYN-EISALSKDTFKGLKELKTLDLSYNKIS 135
L L N + + + F L L++S N ++ A+ TF+GL L TL L +
Sbjct: 84 TILWLHSNALAHIDAAAFSGLALLEQLDLSDNAQLRAVDPATFRGLGRLHTLHLDRCGLR 143
Query: 136 VINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLP 195
+ FR L+ L L N + D + FS L +L L L N I VP L
Sbjct: 144 ELGPGLFRGLAALQYLYLQDNGLQALPD-DAFSDLGNLTHLFLHGNHIPSVPERAFRGL- 201
Query: 196 HQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTL 248
H SL L L++N + V ++F L L TL L LR+L
Sbjct: 202 H-SLDRLLLHQNRVARVHPHAFR-DLGRLMTLYLFANNLSALSAEALAPLRSL 252
>MGI|MGI:2141485 [details] [associations]
symbol:Lrtm2 "leucine-rich repeats and transmembrane domains
2" species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:2141485
GO:GO:0016021 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
HSSP:Q9BZR6 GeneTree:ENSGT00700000104083 HOGENOM:HOG000290674
CTD:654429 eggNOG:NOG248110 HOVERGEN:HBG081938 OMA:GEHEDQK
OrthoDB:EOG4C5CKK EMBL:AK039006 EMBL:AK045494 EMBL:BC058944
IPI:IPI00221765 RefSeq:NP_001165678.1 RefSeq:NP_766080.1
UniGene:Mm.121498 ProteinModelPortal:Q8BGX3 SMR:Q8BGX3
PhosphoSite:Q8BGX3 PaxDb:Q8BGX3 PRIDE:Q8BGX3
Ensembl:ENSMUST00000068351 Ensembl:ENSMUST00000112756
Ensembl:ENSMUST00000168793 GeneID:211187 KEGG:mmu:211187
UCSC:uc009dmb.2 InParanoid:Q8BGX3 NextBio:373160 Bgee:Q8BGX3
CleanEx:MM_LRTM2 Genevestigator:Q8BGX3
GermOnline:ENSMUSG00000055003 Uniprot:Q8BGX3
Length = 370
Score = 178 (67.7 bits), Expect = 8.9e-12, Sum P(2) = 8.9e-12
Identities = 53/179 (29%), Positives = 86/179 (48%)
Query: 4 FLTCIFLILALTKLNKAICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRI 63
++TC ++ L ++ A CP C C + LE C+ GL VP + Q+++L N++
Sbjct: 23 WITC-WIALCAVEVIPA-CPFSCTCDSRSLEVDCSGLGLTTVPPDVPAATQSLLLLNNKL 80
Query: 64 SNV-HYTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLK 122
S + + + L+ LDLS N ++ L FE L L + N I L +D +
Sbjct: 81 SALPSWAFANLSNLQRLDLSNNFLDQLPRSIFEDLVNLTELQLRNNSIRTLDRDLLQHSP 140
Query: 123 ELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNN 181
L+ LDLS N ++ + F L L L L N + D F L SL++L++ +N
Sbjct: 141 LLRHLDLSINGLAQLPPGLFDGLLALRSLSLRSNRLQSL-DRLTFEPLASLQLLQVGDN 198
Score = 140 (54.3 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 39/113 (34%), Positives = 58/113 (51%)
Query: 343 RLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNL 401
RLDLS N + F+ L + L ++ L N + ++D+ + L + ++ N L
Sbjct: 96 RLDLSNNFLDQLPRSIFEDL--VNLTELQLRNNSIRTLDRDLLQHSPLLRHLDLSIN-GL 152
Query: 402 KQLPSKLFQGNTNLKSVSLKGNSLSHLEASHF-PLERISFLDLSDNPLHCDCN 453
QLP LF G L+S+SL+ N L L+ F PL + L + DNP CDCN
Sbjct: 153 AQLPPGLFDGLLALRSLSLRSNRLQSLDRLTFEPLASLQLLQVGDNPWECDCN 205
Score = 52 (23.4 bits), Expect = 8.9e-12, Sum P(2) = 8.9e-12
Identities = 8/21 (38%), Positives = 16/21 (76%)
Query: 509 LNNLKCSSPPDIKGLEVKAVP 529
L+ L C+ P +++G +++AVP
Sbjct: 223 LDQLACTLPKELRGKDMRAVP 243
>UNIPROTKB|Q5VT99 [details] [associations]
symbol:LRRC38 "Leucine-rich repeat-containing protein 38"
species:9606 "Homo sapiens" [GO:0006811 "ion transport"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005216
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 EMBL:CH471167
HSSP:Q9BZR6 EMBL:AL603749 EMBL:AL354712 EMBL:BC016048
IPI:IPI00059708 RefSeq:NP_001010847.1 UniGene:Hs.657356
ProteinModelPortal:Q5VT99 SMR:Q5VT99 DMDM:74756785 PRIDE:Q5VT99
Ensembl:ENST00000376085 GeneID:126755 KEGG:hsa:126755
UCSC:uc001avb.3 CTD:126755 GeneCards:GC01M013801 HGNC:HGNC:27005
HPA:HPA038778 neXtProt:NX_Q5VT99 eggNOG:KOG0619
HOGENOM:HOG000113369 HOVERGEN:HBG094920 OMA:LDEIQCS
OrthoDB:EOG4GMTXN ChiTaRS:LRRC38 GenomeRNAi:126755 NextBio:81900
Bgee:Q5VT99 CleanEx:HS_LRRC38 Genevestigator:Q5VT99 Uniprot:Q5VT99
Length = 294
Score = 184 (69.8 bits), Expect = 9.1e-12, P = 9.1e-12
Identities = 49/161 (30%), Positives = 79/161 (49%)
Query: 22 CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLS-FYIELRSLD 80
CP+ C C D C D GL VP +V+ +++ NRI + FY +L LD
Sbjct: 28 CPAGCACTDPHT-VDCRDRGLPSVPDPFPLDVRKLLVAGNRIQRIPEDFFIFYGDLVYLD 86
Query: 81 LSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKT 140
N + L F KL+ L++SYN ++ L F+ L L L+ N + +++
Sbjct: 87 FRNNSLRSLEEGTFSGSAKLVFLDLSYNNLTQLGAGAFRSAGRLVKLSLANNNLVGVHED 146
Query: 141 AFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNN 181
AF L++L L+ NN+ + + ++L +LR L+LD N
Sbjct: 147 AFETLESLQVLELNDNNLRSLSVAAL-AALPALRSLRLDGN 186
Score = 156 (60.0 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 42/136 (30%), Positives = 75/136 (55%)
Query: 72 FYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSY 131
F +++R L ++ N+I + F + L+ L+ N + +L + TF G +L LDLSY
Sbjct: 54 FPLDVRKLLVAGNRIQRIPEDFFIFYGDLVYLDFRNNSLRSLEEGTFSGSAKLVFLDLSY 113
Query: 132 NKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVL 191
N ++ + AFR L L L+ NN+ + + F +L+SL++L+L++N + + L
Sbjct: 114 NNLTQLGAGAFRSAGRLVKLSLANNNLVGVHE-DAFETLESLQVLELNDNNLRSLSVAAL 172
Query: 192 SNLPHQSLHYLYLNEN 207
+ LP +L L L+ N
Sbjct: 173 AALP--ALRSLRLDGN 186
>MGI|MGI:2136886 [details] [associations]
symbol:Rtn4r "reticulon 4 receptor" species:10090 "Mus
musculus" [GO:0005515 "protein binding" evidence=IPI] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0007409 "axonogenesis"
evidence=IDA] [GO:0009986 "cell surface" evidence=ISO] [GO:0016020
"membrane" evidence=IEA] [GO:0031225 "anchored to membrane"
evidence=IEA] InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:2136886
GO:GO:0005783 GO:GO:0005886 GO:GO:0009986 GO:GO:0031225
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007409 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101803 HOGENOM:HOG000116109
HOVERGEN:HBG063707 CTD:65078 KO:K16659 EMBL:AF283462 EMBL:BC052317
EMBL:BC058381 IPI:IPI00121067 RefSeq:NP_075358.1 UniGene:Mm.40149
ProteinModelPortal:Q99PI8 SMR:Q99PI8 MINT:MINT-188355 STRING:Q99PI8
PRIDE:Q99PI8 Ensembl:ENSMUST00000059589 GeneID:65079 KEGG:mmu:65079
UCSC:uc007ymv.1 InParanoid:Q99PI8 OMA:PLWAWLQ OrthoDB:EOG4MGS7M
NextBio:320259 Bgee:Q99PI8 CleanEx:MM_RTN4R Genevestigator:Q99PI8
GermOnline:ENSMUSG00000043811 Uniprot:Q99PI8
Length = 473
Score = 190 (71.9 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 72/231 (31%), Positives = 102/231 (44%)
Query: 22 CPSRCQCFDQ-KLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSFYI--ELRS 78
CP C C+++ K+ SC GL+ VP + Q I L NRIS+V SF L
Sbjct: 27 CPGACVCYNEPKVTTSCPQQGLQAVPTGIPASSQRIFLHGNRISHVP-AASFQSCRNLTI 85
Query: 79 LDLSVNKINVLGSHNFEYQNKLLNLNISYN-EISALSKDTFKGLKELKTLDLSYNKISVI 137
L L N + + + F L L++S N ++ + TF GL L TL L + +
Sbjct: 86 LWLHSNALARIDAAAFTGLTLLEQLDLSDNAQLHVVDPTTFHGLGHLHTLHLDRCGLREL 145
Query: 138 NKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQ 197
FR L+ L L NN+ D+ F L +L L L N+I VP + L H
Sbjct: 146 GPGLFRGLAALQYLYLQDNNLQALPDNT-FRDLGNLTHLFLHGNRIPSVPEHAFRGL-H- 202
Query: 198 SLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTL 248
SL L L++N + V ++F L L TL L + LR+L
Sbjct: 203 SLDRLLLHQNHVARVHPHAFR-DLGRLMTLYLFANNLSMLPAEVLMPLRSL 252
Score = 121 (47.7 bits), Expect = 0.00039, P = 0.00039
Identities = 33/106 (31%), Positives = 55/106 (51%)
Query: 76 LRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKIS 135
L+ L L N + L + F L +L + N I ++ + F+GL L L L N ++
Sbjct: 156 LQYLYLQDNNLQALPDNTFRDLGNLTHLFLHGNRIPSVPEHAFRGLHSLDRLLLHQNHVA 215
Query: 136 VINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNN 181
++ AFRD L L L NN++ +E+ L+SL+ L+L++N
Sbjct: 216 RVHPHAFRDLGRLMTLYLFANNLSMLP-AEVLMPLRSLQYLRLNDN 260
>UNIPROTKB|Q14392 [details] [associations]
symbol:LRRC32 "Leucine-rich repeat-containing protein 32"
species:9606 "Homo sapiens" [GO:0010628 "positive regulation of
gene expression" evidence=IEA] [GO:0046007 "negative regulation of
activated T cell proliferation" evidence=IEA] [GO:0050710 "negative
regulation of cytokine secretion" evidence=IEA] [GO:0005887
"integral to plasma membrane" evidence=TAS] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005887 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 GO:GO:0010628 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0046007 GO:GO:0050710 EMBL:Z24680
EMBL:BC052210 EMBL:BC070079 IPI:IPI00030280 PIR:S42799
RefSeq:NP_001122394.1 RefSeq:NP_005503.1 UniGene:Hs.151641
ProteinModelPortal:Q14392 SMR:Q14392 DIP:DIP-48932N STRING:Q14392
PhosphoSite:Q14392 DMDM:2498405 PaxDb:Q14392 PRIDE:Q14392
Ensembl:ENST00000260061 Ensembl:ENST00000404995
Ensembl:ENST00000407242 GeneID:2615 KEGG:hsa:2615 UCSC:uc001oxq.4
CTD:2615 GeneCards:GC11M076368 H-InvDB:HIX0036396 HGNC:HGNC:4161
MIM:137207 neXtProt:NX_Q14392 PharmGKB:PA28574 HOGENOM:HOG000113368
HOVERGEN:HBG052348 InParanoid:Q14392 OMA:CCGNGWL OrthoDB:EOG4DBTF0
PhylomeDB:Q14392 ChiTaRS:LRRC32 GenomeRNAi:2615 NextBio:10297
ArrayExpress:Q14392 Bgee:Q14392 CleanEx:HS_LRRC32
Genevestigator:Q14392 GermOnline:ENSG00000137507 Uniprot:Q14392
Length = 662
Score = 195 (73.7 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 70/230 (30%), Positives = 113/230 (49%)
Query: 8 IFLILALTKLNKAICPSR---CQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRIS 64
I L+LAL L A C+ D+K+ SC GL VP L P+ +T+ L N++
Sbjct: 5 ILLLLALLTLGLAAQHQDKVPCKMVDKKV--SCQVLGLLQVPSVLPPDTETLDLSGNQLR 62
Query: 65 NVHYT-LSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEIS---ALSKDTFKG 120
++ + L FY LR LDLS N+I+ L F+ L +L++++N ++ ALS
Sbjct: 63 SILASPLGFYTALRHLDLSTNEISFLQPGAFQALTHLEHLSLAHNRLAMATALSAGGLGP 122
Query: 121 LKELKTLDLSYNKI-SVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLD 179
L + +LDLS N + S + + + L L L+ N++T F + +L L L
Sbjct: 123 LPRVTSLDLSGNSLYSGLLERLLGEAPSLHTLSLAENSLTRLT-RHTFRDMPALEQLDLH 181
Query: 180 NNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLAL 229
+N ++D+ + LP L +L L+ N + + D F+L L L L
Sbjct: 182 SNVLMDIEDGAFEGLPR--LTHLNLSRNSLTCISD----FSLQQLRVLDL 225
Score = 149 (57.5 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 94/390 (24%), Positives = 157/390 (40%)
Query: 76 LRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKIS 135
L +L L+ N + L H F L L++ N + + F+GL L L+LS N ++
Sbjct: 151 LHTLSLAENSLTRLTRHTFRDMPALEQLDLHSNVLMDIEDGAFEGLPRLTHLNLSRNSLT 210
Query: 136 VINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLP 195
I+ + + L +L LS N+I F+ + + L L L N++L P+ L+ LP
Sbjct: 211 CISDFSLQQ---LRVLDLSCNSIEAFQTASQPQAEFQLTWLDLRENKLLHFPD--LAALP 265
Query: 196 HQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXX 255
L YL L+ NLI L P +H + + R L
Sbjct: 266 R--LIYLNLSNNLIR--LPTGPPQDSKGIHAPSEGWSALPLSAPSGNASGRPLSQLLNLD 321
Query: 256 XXXXAI---PTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSID 311
I P L L++L L+LS N ++ SL L L ++L N L++++
Sbjct: 322 LSYNEIELIPDSFLEHLTSLCFLNLSRNCLRTFEARRLGSLPCLML--LDLSHNALETLE 379
Query: 312 QXXXXXXXXXXXXXXXXXAFSLTPL---GTLKCDRLDLSGNNFSNIDS---------VAF 359
L P RL+L GN S VAF
Sbjct: 380 LGARALGSLRTLLLQGNALRDLPPYTFANLASLQRLNLQGNRVSPCGGPDEPGPSGCVAF 439
Query: 360 KSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSV 418
+ SL+ ++L+ N ++ + AF+ + L + ++ N L+ L +L+ +
Sbjct: 440 SGITSLR--SLSLVDNEIELLRAGAFL-HTPLTELDLSSNPGLEVATGALGGLEASLEVL 496
Query: 419 SLKGNSLSHLEASHFPLERISFLDLSDNPL 448
+L+GN L L+ + L+L++N L
Sbjct: 497 ALQGNGLMVLQVDLPCFICLKRLNLAENRL 526
Score = 123 (48.4 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 92/384 (23%), Positives = 147/384 (38%)
Query: 75 ELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKI 134
+ +LDLS N++ + + + L +L++S NEIS L F+ L L+ L L++N++
Sbjct: 50 DTETLDLSGNQLRSILASPLGFYTALRHLDLSTNEISFLQPGAFQALTHLEHLSLAHNRL 109
Query: 135 SV---INKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVL 191
++ ++ + L LS N++ + SL L L N + + +
Sbjct: 110 AMATALSAGGLGPLPRVTSLDLSGNSLYSGLLERLLGEAPSLHTLSLAENSLTRLTRHTF 169
Query: 192 SNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXX 251
++P +L L L+ N++ + D +F L L L L LR L
Sbjct: 170 RDMP--ALEQLDLHSNVLMDIEDGAFE-GLPRLTHLNLSRNSLTCISDFSLQQLRVLDLS 226
Query: 252 XXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNI-DSVAFKSLFSLKLVKINLI-----P 305
Q L LDL N + D A L L L NLI P
Sbjct: 227 CNSIEAFQTASQPQAE--FQLTWLDLRENKLLHFPDLAALPRLIYLNLSN-NLIRLPTGP 283
Query: 306 NLDSIDQXXXXXXXXXXXXXXXXXAFSLTPLGTLKCDRLDLSGNNFSNIDSVAFKSLFSL 365
DS S PL L LDLS N I + L SL
Sbjct: 284 PQDSKGIHAPSEGWSALPLSAPSGNASGRPLSQLL--NLDLSYNEIELIPDSFLEHLTSL 341
Query: 366 KLVKINLIPN-LDSIDQRAFVDNIQLETVIINEN-MNLKQLPSKLFQGNTNLKSVSLKGN 423
+NL N L + + R L + ++ N + +L ++ G+ L+++ L+GN
Sbjct: 342 CF--LNLSRNCLRTFEARRLGSLPCLMLLDLSHNALETLELGARAL-GS--LRTLLLQGN 396
Query: 424 SLSHLEASHFP-LERISFLDLSDN 446
+L L F L + L+L N
Sbjct: 397 ALRDLPPYTFANLASLQRLNLQGN 420
Score = 43 (20.2 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 415 LKSVSLKGNSLSHLEASHFPLERISFLDLSDN 446
LK ++L N LSHL A + + LDL +N
Sbjct: 516 LKRLNLAENRLSHLPAWTQAVS-LEVLDLRNN 546
>RGD|1302973 [details] [associations]
symbol:Rxfp1 "relaxin/insulin-like family peptide receptor 1"
species:10116 "Rattus norvegicus" [GO:0004930 "G-protein coupled
receptor activity" evidence=IEA;ISO;IDA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0007188 "adenylate cyclase-modulating
G-protein coupled receptor signaling pathway" evidence=IEA;ISO]
[GO:0007189 "adenylate cyclase-activating G-protein coupled
receptor signaling pathway" evidence=IMP] [GO:0007567 "parturition"
evidence=IEA;ISO] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA;ISO] [GO:0030198
"extracellular matrix organization" evidence=IEA;ISO] [GO:0042562
"hormone binding" evidence=IEA;ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0060427 "lung connective tissue development"
evidence=IEA;ISO] [GO:0060658 "nipple morphogenesis"
evidence=IEA;ISO] InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002172 InterPro:IPR008112 InterPro:IPR017452
Pfam:PF00001 Pfam:PF00057 PRINTS:PR00237 PRINTS:PR01739
PROSITE:PS00237 PROSITE:PS50068 PROSITE:PS50262 PROSITE:PS51450
SMART:SM00192 RGD:1302973 GO:GO:0016021 GO:GO:0005886 GO:GO:0030154
GO:GO:0046872 GO:GO:0004930 GO:GO:0007189 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 GO:GO:0030198 GO:GO:0042562
Gene3D:4.10.400.10 InterPro:IPR023415 SUPFAM:SSF57424
PROSITE:PS01209 GO:GO:0007567 InterPro:IPR000372 SMART:SM00013
HSSP:P01130 GO:GO:0060427 CTD:59350 HOVERGEN:HBG026354 KO:K04306
GO:GO:0060658 HOGENOM:HOG000049056 OrthoDB:EOG4NGGM1 EMBL:AY509976
IPI:IPI00409992 RefSeq:NP_958820.1 UniGene:Rn.109230
ProteinModelPortal:Q6R6I6 SMR:Q6R6I6 STRING:Q6R6I6
PhosphoSite:Q6R6I6 PRIDE:Q6R6I6 GeneID:295144 KEGG:rno:295144
UCSC:RGD:1302973 InParanoid:Q6R6I6 NextBio:639021
Genevestigator:Q6R6I6 Uniprot:Q6R6I6
Length = 758
Score = 193 (73.0 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 76/276 (27%), Positives = 116/276 (42%)
Query: 23 PSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSF--YIELRSLD 80
P C C D LE C +A L VP ++ V + L+ N I + SF Y +L+ L
Sbjct: 101 PMHCLCRD--LELDCDEANLRAVP-SVSSNVTVMSLQWNFIRTLPPN-SFRKYHDLQKLC 156
Query: 81 LSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKT 140
L NKI + F + L L +S+N I+ L F+ L L+ L + N +S I+
Sbjct: 157 LQNNKIRSVSVSAFRGLHSLTKLYLSHNRITFLKPGVFEDLHRLEWLIIEDNHLSRISPL 216
Query: 141 AFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLH 200
F L LL+L N +T D + + L L + N+I ++ N L+ + +L
Sbjct: 217 TFYGLNSLILLVLMNNALTRLPDKPLCQHMPRLHWLDFEGNRIHNLRN--LTFISCNNLT 274
Query: 201 YLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXA 260
L + +N I + +++F L L L L L+ L
Sbjct: 275 VLVMRKNKINHLNEHAFTH-LQKLDELDLGSNKIENLPPNIFKDLKELSQLNISYNPIQK 333
Query: 261 IPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSL 296
I Q L+ L +L L G SNI F+ L +L
Sbjct: 334 IEVNQFDYLAKLKSLSLEGIEISNIQQRMFRPLINL 369
Score = 137 (53.3 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 52/176 (29%), Positives = 81/176 (46%)
Query: 51 PEVQTIILRENRISNVHYTLSFYIELRSLDLSV---NKINVLGSHNFEYQNKLLNLNISY 107
P + + NRI N+ L+F I +L + V NKIN L H F + KL L++
Sbjct: 247 PRLHWLDFEGNRIHNLR-NLTF-ISCNNLTVLVMRKNKINHLNEHAFTHLQKLDELDLGS 304
Query: 108 NEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIF 167
N+I L + FK LKEL L++SYN I I F L+ L L I+ + +F
Sbjct: 305 NKIENLPPNIFKDLKELSQLNISYNPIQKIEVNQFDYLAKLKSLSLEGIEISNIQQ-RMF 363
Query: 168 SSLKSLRILKLDNNQILDVPNNVLSNLPH-QSLHYLYLNENLIETVLDNSFPFTLT 222
L +L + Q +V S P+ + L ENL+ +++ F + ++
Sbjct: 364 RPLINLSHIYFKKFQYCGYAPHVRSCKPNTDGISSL---ENLLASIIQRVFVWVVS 416
Score = 136 (52.9 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 53/229 (23%), Positives = 90/229 (39%)
Query: 77 RSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISV 136
R L+L ++ N+ + + + +++ +N I L ++F+ +L+ L L NKI
Sbjct: 107 RDLELDCDEANLRAVPSVS--SNVTVMSLQWNFIRTLPPNSFRKYHDLQKLCLQNNKIRS 164
Query: 137 INKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPH 196
++ +AFR L L LS N IT+ + +F L L L +++N + + L
Sbjct: 165 VSVSAFRGLHSLTKLYLSHNRITFLKPG-VFEDLHRLEWLIIEDNHLSRISPLTFYGL-- 221
Query: 197 QSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXX 256
SL L L N + + D + LH L ++ L
Sbjct: 222 NSLILLVLMNNALTRLPDKPLCQHMPRLHWLDFEGNRIHNLRNLTFISCNNLTVLVMRKN 281
Query: 257 XXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIP 305
+ + L L LDL N N+ FK L L + I+ P
Sbjct: 282 KINHLNEHAFTHLQKLDELDLGSNKIENLPPNIFKDLKELSQLNISYNP 330
>UNIPROTKB|Q3MHH9 [details] [associations]
symbol:ECM2 "Extracellular matrix protein 2" species:9913
"Bos taurus" [GO:0005578 "proteinaceous extracellular matrix"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR001007
Pfam:PF00093 PROSITE:PS01208 PROSITE:PS50184 PROSITE:PS51450
SMART:SM00214 GO:GO:0005578 eggNOG:COG4886 HSSP:P21809
EMBL:BC105232 IPI:IPI00692442 RefSeq:NP_001029769.1
UniGene:Bt.42321 ProteinModelPortal:Q3MHH9 GeneID:533916
KEGG:bta:533916 CTD:1842 HOGENOM:HOG000112319 HOVERGEN:HBG031529
InParanoid:Q3MHH9 KO:K08119 OrthoDB:EOG4868CR NextBio:20876193
Uniprot:Q3MHH9
Length = 680
Score = 192 (72.6 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 76/273 (27%), Positives = 117/273 (42%)
Query: 23 PSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNV-HYTLSFYIELRSLDL 81
PS C + + SC A L +P PE+ ++ L +N I+++ + L LDL
Sbjct: 298 PSMCSLSYKTI--SCISADLTQIPPLTAPEITSLELIDNSITSIPDEAFNGLPNLERLDL 355
Query: 82 SVNKINV--LGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINK 139
S N I +G F++ L+ LN+ N + + + L+ELK ++ NK+ VI++
Sbjct: 356 SKNNITSSGIGPKAFKFLKNLMRLNMDGNNLVTIPSELPSTLEELK---INENKLQVIDE 412
Query: 140 TAFRDTLHLELLILSFNNITYFE-DSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQS 198
+ D L L L NN++ +S F LKSL L+L N+ +P LP S
Sbjct: 413 ESLSDLNQLVTLELEGNNLSETNVNSLAFKPLKSLSYLRLGRNKFRIIPQG----LP-AS 467
Query: 199 LHYLYLNENLIETVLDNSFPFTLT-NLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXX 257
+ LYL N IE + + SF T N+ L + L
Sbjct: 468 IEELYLENNQIEEITEISFNHTRKINVIGLRYNKIEENRIAPLAWINQENLESIDLSYNK 527
Query: 258 XXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAF 290
+P+ L K +LV+L L GN I F
Sbjct: 528 LYHVPS-YLPK--SLVHLVLIGNQIERIPGYVF 557
Score = 131 (51.2 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 60/235 (25%), Positives = 96/235 (40%)
Query: 75 ELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEI--SALSKDTFKGLKELKTLDLSYN 132
E+ SL+L N I + F L L++S N I S + FK LK L L++ N
Sbjct: 325 EITSLELIDNSITSIPDEAFNGLPNLERLDLSKNNITSSGIGPKAFKFLKNLMRLNMDGN 384
Query: 133 KISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLS 192
+ I + TL E L ++ N + D E S L L L+L+ N + + N L+
Sbjct: 385 NLVTI-PSELPSTL--EELKINENKLQVI-DEESLSDLNQLVTLELEGNNLSETNVNSLA 440
Query: 193 NLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXX 252
P +SL YL L N ++ P ++ L+ + +
Sbjct: 441 FKPLKSLSYLRLGRNKFR-IIPQGLPASIEELYLENNQIEEITEISFNHTRKINVIGLRY 499
Query: 253 XXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLV--KINLIP 305
P +++ + L ++DLS N ++ S KSL L L+ +I IP
Sbjct: 500 NKIEENRIAPLAWINQEN-LESIDLSYNKLYHVPSYLPKSLVHLVLIGNQIERIP 553
>MGI|MGI:2444651 [details] [associations]
symbol:Lingo4 "leucine rich repeat and Ig domain containing
4" species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 MGI:MGI:2444651 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00690000101682 HOGENOM:HOG000246971
HOVERGEN:HBG057546 CTD:339398 eggNOG:NOG306417 OrthoDB:EOG49KFQ7
EMBL:BC117866 EMBL:BC117867 EMBL:AK042286 IPI:IPI00273210
RefSeq:NP_796224.1 UniGene:Mm.213001 ProteinModelPortal:Q149C3
SMR:Q149C3 PhosphoSite:Q149C3 PRIDE:Q149C3
Ensembl:ENSMUST00000050975 GeneID:320747 KEGG:mmu:320747
UCSC:uc008qgb.1 InParanoid:Q149C3 NextBio:397357 Bgee:Q149C3
CleanEx:MM_LINGO4 Genevestigator:Q149C3 Uniprot:Q149C3
Length = 593
Score = 191 (72.3 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 77/296 (26%), Positives = 124/296 (41%)
Query: 8 IFLILALTKLNKAICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVH 67
+FL+L L + + CP+ C C Q C L+ +P L + + + L NR+ +
Sbjct: 18 LFLLL-LPGGSISSCPTVCDCTSQTRAVFCAHRRLDTIPGGLPLDTELLDLSGNRLWGLQ 76
Query: 68 Y-TLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKT 126
LS +L+ LDLS N+++ L F LL L + N + + F GL L
Sbjct: 77 RGMLSRLGQLQELDLSYNQLSTLEPGAFHGLQSLLTLRLQGNRLRIVGPGIFSGLTALTL 136
Query: 127 LDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDV 186
LDL N+I + AF + L+ L + N++ + F+ L L + L+ + V
Sbjct: 137 LDLRLNQIVLFLDGAFSELGSLQQLEVGDNHLVFVAPGA-FAGLAKLSTITLERCNLSTV 195
Query: 187 PNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLR 246
P L+ LP +L L L E IE + + L L L + +
Sbjct: 196 PGLALAQLP--ALVALRLRELDIERLPAGALR-GLGQLKELEIHHWPSLEALDPGSLVGL 252
Query: 247 TLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
L ++P + L LS L LDLS N S I + L L+ ++++
Sbjct: 253 NLSSLAITRCNLSSVPFQALHHLSFLRILDLSQNPISAIPARRLSPLVRLQELRLS 308
Score = 149 (57.5 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 82/316 (25%), Positives = 128/316 (40%)
Query: 116 DTFKGLKELKT--LDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSL 173
DT G L T LDLS N++ + + L+ L LS+N ++ E F L+SL
Sbjct: 52 DTIPGGLPLDTELLDLSGNRLWGLQRGMLSRLGQLQELDLSYNQLSTLEPGA-FHGLQSL 110
Query: 174 RILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXX 233
L+L N++ V + S L +L L LN+ I LD +F L +L L +
Sbjct: 111 LTLRLQGNRLRIVGPGIFSGLTALTLLDLRLNQ--IVLFLDGAFS-ELGSLQQLEVGDNH 167
Query: 234 XXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSL 293
L L +P L++L ALV L L + + + A + L
Sbjct: 168 LVFVAPGAFAGLAKLSTITLERCNLSTVPGLALAQLPALVALRLRELDIERLPAGALRGL 227
Query: 294 FSLKLVKINLIPNLDSIDQXXXXXXXXXXXXXXXXXAFSLT--PLGTLKCDR-LDLSGNN 350
LK ++I+ P+L+++D S+ L L R LDLS N
Sbjct: 228 GQLKELEIHHWPSLEALDPGSLVGLNLSSLAITRCNLSSVPFQALHHLSFLRILDLSQNP 287
Query: 351 FSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQ 410
S I + L L+ ++++ L SI AF + + +N L+ L F
Sbjct: 288 ISAIPARRLSPLVRLQELRLSGAC-LTSIAAHAFHGLTAFHLLDVADNA-LQTLEETAFP 345
Query: 411 GNTNLKSVSLKGNSLS 426
L ++ L GN L+
Sbjct: 346 SPDKLVTLRLSGNPLT 361
Score = 121 (47.7 bits), Expect = 0.00054, P = 0.00054
Identities = 75/312 (24%), Positives = 123/312 (39%)
Query: 146 LHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLN 205
L ELL LS N + + + S L L+ L L NQ+ + L QSL L L
Sbjct: 60 LDTELLDLSGNRLWGLQRG-MLSRLGQLQELDLSYNQLSTLEPGAFHGL--QSLLTLRLQ 116
Query: 206 ENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQ 265
N + V F LT L L L L +L +
Sbjct: 117 GNRLRIVGPGIFS-GLTALTLLDLRLNQIVLFLDGAFSELGSLQQLEVGDNHLVFVAPGA 175
Query: 266 LSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQXXXXXXXXXXXXX 325
+ L+ L + L N S + +A L +L +++ + +++ +
Sbjct: 176 FAGLAKLSTITLERCNLSTVPGLALAQLPALVALRLREL-DIERLPAGALRGLGQLKELE 234
Query: 326 XXXXAFSLTPLGTLKCDRLDLSGNNFS--NIDSVAFKSLFSLKLVKI-NLIPN-LDSIDQ 381
SL L L+LS + N+ SV F++L L ++I +L N + +I
Sbjct: 235 IHHWP-SLEALDPGSLVGLNLSSLAITRCNLSSVPFQALHHLSFLRILDLSQNPISAIPA 293
Query: 382 RAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFPL-ERISF 440
R ++L+ + ++ L + + F G T + + N+L LE + FP +++
Sbjct: 294 RRLSPLVRLQELRLS-GACLTSIAAHAFHGLTAFHLLDVADNALQTLEETAFPSPDKLVT 352
Query: 441 LDLSDNPLHCDC 452
L LS NPL CDC
Sbjct: 353 LRLSGNPLTCDC 364
>UNIPROTKB|E1BX56 [details] [associations]
symbol:LRRTM1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007610 "behavior" evidence=IEA] [GO:0030424
"axon" evidence=IEA] [GO:0030426 "growth cone" evidence=IEA]
[GO:0035418 "protein localization to synapse" evidence=IEA]
[GO:0050808 "synapse organization" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005783 GO:GO:0007610 GO:GO:0030424
InterPro:IPR003591 SMART:SM00369 GO:GO:0050808 GO:GO:0030426
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0035418
GeneTree:ENSGT00700000104056 CTD:347730 KO:K16665 OMA:EPDLFHG
EMBL:AADN02014722 IPI:IPI00599810 RefSeq:XP_001233729.1
ProteinModelPortal:E1BX56 Ensembl:ENSGALT00000025729 GeneID:771502
KEGG:gga:771502 NextBio:20921702 Uniprot:E1BX56
Length = 521
Score = 190 (71.9 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 66/238 (27%), Positives = 109/238 (45%)
Query: 76 LRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKIS 135
+ L L N ++ L F +L L + +N I ++ + F+ L+ +K L LS NKI+
Sbjct: 67 MMGLSLRYNSLSELHDGQFTGLMQLTWLYLDHNHICSVEGNAFQKLRRVKELTLSSNKIT 126
Query: 136 VINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLP 195
+ FR +L + LS+NN+ E ++F L+ L L + +N I VP + +
Sbjct: 127 QLPNNTFRPMPNLRSVDLSYNNLQSLEP-DLFHGLRKLTTLHMRSNAIKFVPVRIFQDC- 184
Query: 196 HQSLHYLYLNENLIETVLDNSFP--FTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXX 253
+SL +L + N ++++ NSF F LT LH L L +LH
Sbjct: 185 -RSLKFLDIGYNQLKSLARNSFAGLFKLTELH---LEHNDLVKVNLAHFPRLISLHSLCL 240
Query: 254 XXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKI--NLIPNLDS 309
+ L + L LDLSGN I+ F+S+ LK +++ N + +DS
Sbjct: 241 RRNKVTIV-VNTLDWIWQLEKLDLSGNEIEYIEPHVFESVPHLKSLQLDSNRLTYIDS 297
Score = 185 (70.2 bits), Expect = 4.3e-11, P = 4.3e-11
Identities = 75/282 (26%), Positives = 122/282 (43%)
Query: 22 CPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHY-TLSFYIELRSLD 80
CP C+C + L C L +P L+ + + LR N +S +H + ++L L
Sbjct: 39 CPQLCRCEGRLLY--CESLNLTEMPRNLSG-MMGLSLRYNSLSELHDGQFTGLMQLTWLY 95
Query: 81 LSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKT 140
L N I + + F+ ++ L +S N+I+ L +TF+ + L+++DLSYN + +
Sbjct: 96 LDHNHICSVEGNAFQKLRRVKELTLSSNKITQLPNNTFRPMPNLRSVDLSYNNLQSLEPD 155
Query: 141 AFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLH 200
F L L + N I F IF +SL+ L + NQ+ + N + L L
Sbjct: 156 LFHGLRKLTTLHMRSNAIK-FVPVRIFQDCRSLKFLDIGYNQLKSLARNSFAGL--FKLT 212
Query: 201 YLYLNEN-LIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXX 259
L+L N L++ L + FP L +LH+L L + L
Sbjct: 213 ELHLEHNDLVKVNLAH-FP-RLISLHSLCLRRNKVTIVVNTLD-WIWQLEKLDLSGNEIE 269
Query: 260 AIPTKQLSKLSALVNLDLSGNNFSNIDSV---AFKSLFSLKL 298
I + L +L L N + IDS ++KSL S+ L
Sbjct: 270 YIEPHVFESVPHLKSLQLDSNRLTYIDSRILDSWKSLTSISL 311
Score = 166 (63.5 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 55/208 (26%), Positives = 96/208 (46%)
Query: 76 LRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKIS 135
++ L LS NKI L ++ F L ++++SYN + +L D F GL++L TL + N I
Sbjct: 115 VKELTLSSNKITQLPNNTFRPMPNLRSVDLSYNNLQSLEPDLFHGLRKLTTLHMRSNAIK 174
Query: 136 VINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLP 195
+ F+D L+ L + +N + + F+ L L L L++N ++ V N L++ P
Sbjct: 175 FVPVRIFQDCRSLKFLDIGYNQLKSLARNS-FAGLFKLTELHLEHNDLVKV-N--LAHFP 230
Query: 196 HQ-SLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXX 254
SLH L L N + T++ N+ + + L L L ++ L
Sbjct: 231 RLISLHSLCLRRNKV-TIVVNTLDW-IWQLEKLDLSGNEIEYIEPHVFESVPHLKSLQLD 288
Query: 255 XXXXXAIPTKQLSKLSALVNLDLSGNNF 282
I ++ L +L ++ LS N +
Sbjct: 289 SNRLTYIDSRILDSWKSLTSISLSANTW 316
Score = 124 (48.7 bits), Expect = 0.00021, P = 0.00021
Identities = 70/283 (24%), Positives = 114/283 (40%)
Query: 151 LILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIE 210
L L +N+++ D + F+ L L L LD+N I V N L + + L L+ N I
Sbjct: 70 LSLRYNSLSELHDGQ-FTGLMQLTWLYLDHNHICSVEGNAFQKL--RRVKELTLSSNKIT 126
Query: 211 TVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLS 270
+ +N+F + NL ++ L LR L +P +
Sbjct: 127 QLPNNTFR-PMPNLRSVDLSYNNLQSLEPDLFHGLRKLTTLHMRSNAIKFVPVRIFQDCR 185
Query: 271 ALVNLDLSGNNFSNIDSVAFKSLFSLK--------LVKINL--IPNLDSIDQXXXXXXXX 320
+L LD+ N ++ +F LF L LVK+NL P L S+
Sbjct: 186 SLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDLVKVNLAHFPRLISLHSLCLRRNKV 245
Query: 321 XXXXXXXXXAFSLTPLGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKI--NLIPNLDS 378
+ L ++LDLSGN I+ F+S+ LK +++ N + +DS
Sbjct: 246 TIVVNTLDWIWQL--------EKLDLSGNEIEYIEPHVFESVPHLKSLQLDSNRLTYIDS 297
Query: 379 --IDQRAFVDNIQLETVIINENMNLKQLPSKL--FQG--NTNL 415
+D + +I L + N+ L S L F+G ++NL
Sbjct: 298 RILDSWKSLTSISLSANTWDCGRNVCALASWLSSFKGRYDSNL 340
>MGI|MGI:2685197 [details] [associations]
symbol:Lrrc55 "leucine rich repeat containing 55"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:2685197 GO:GO:0016021
GO:GO:0005886 InterPro:IPR000483 SMART:SM00082 GO:GO:0005216
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 HOGENOM:HOG000113369
GeneTree:ENSGT00700000104451 CTD:219527 eggNOG:NOG244842
HOVERGEN:HBG081932 OrthoDB:EOG4NS3BS EMBL:AK134968 IPI:IPI00352775
RefSeq:NP_001028518.1 UniGene:Mm.291095 UniGene:Mm.476412
ProteinModelPortal:Q3UY51 SMR:Q3UY51 PhosphoSite:Q3UY51
PRIDE:Q3UY51 Ensembl:ENSMUST00000099930 Ensembl:ENSMUST00000111601
GeneID:241528 KEGG:mmu:241528 UCSC:uc008kkc.1 InParanoid:Q3UY51
OMA:TANCCHR NextBio:385045 Bgee:Q3UY51 CleanEx:MM_LRRC55
Genevestigator:Q3UY51 Uniprot:Q3UY51
Length = 311
Score = 184 (69.8 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 56/183 (30%), Positives = 92/183 (50%)
Query: 5 LTCIFLILALTKLNK---AICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILREN 61
L +F +LA ++ CP C C +Q ++ C++ L VP L + + + L N
Sbjct: 31 LLLVFFLLAAGVMHSDAGTSCPVLCTCRNQVVD--CSNQRLFSVPPDLPMDTRNLSLAHN 88
Query: 62 RISNVH--YTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFK 119
RI+ V Y L+ Y+ELR LDL N + L F + +L +L++SYN +S + D F+
Sbjct: 89 RIAAVPPGY-LTCYMELRVLDLRNNSLMELPPGLFLHAKRLAHLDLSYNNLSHVPADMFR 147
Query: 120 GLKELKTLDLSYNK-ISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKL 178
L +DLS+N + ++ AF+ +HL L LS+ + + E L L L++
Sbjct: 148 EAHGLVHIDLSHNPWLRRVHPQAFQGLVHLRDLDLSYGGLAFLS-LEALEGLPGLVTLQI 206
Query: 179 DNN 181
N
Sbjct: 207 GGN 209
>UNIPROTKB|D8MCT0 [details] [associations]
symbol:LGR5 "Leucine-rich repeat-containing G
protein-coupled receptor 5" species:9606 "Homo sapiens" [GO:0016500
"protein-hormone receptor activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0016500 EMBL:AC078860 EMBL:AC090116 HGNC:HGNC:4504
EMBL:FN820440 IPI:IPI00970955 SMR:D8MCT0 Ensembl:ENST00000536515
UCSC:uc021rar.1 Uniprot:D8MCT0
Length = 835
Score = 193 (73.0 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 100/374 (26%), Positives = 151/374 (40%)
Query: 22 CPSRCQCF-DQK--LEASCTDAGLEVVPIQLNPEVQTIILRENRIS----NVHYTLSFYI 74
CP+ C C D + L C+D GL +P L+ + L N IS N +L F
Sbjct: 34 CPTHCHCEPDGRMLLRVDCSDLGLSELPSNLSVFTSYLDLSMNNISQLLPNPLPSLRFLE 93
Query: 75 ELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKI 134
ELR L+ N + + F L L + N++ + + + L+ L++L L N+I
Sbjct: 94 ELR---LAGNALTYIPKGAFTGLYSLKVLMLQNNQLRHVPTEALQNLRSLQSLHLHNNRI 150
Query: 135 SVINKTAFRDTLH-LELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSN 193
+ K F D LH LE L L++NN+ F + +L +L+ L +N I +P
Sbjct: 151 HSLGKKCF-DGLHSLETLDLNYNNLDEFPTA--IRTLSNLKELGFHSNNIRSIPEKAFVG 207
Query: 194 LPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXX 253
P SL ++ +N I+ V ++F L L TL L T L
Sbjct: 208 NP--SLITIHFYDNPIQFVGRSAFQH-LPELRTLTLNGASQITEFPDLTGTAN-LESLTL 263
Query: 254 XXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN------L 307
++P ++L L LDLS N ++ S + KL KI+L N +
Sbjct: 264 TGAQISSLPQTVCNQLPNLQVLDLSYNLLEDLPSFSVCQ----KLQKIDLRHNEIYEIKV 319
Query: 308 DSIDQXXXXXXXXXXXXXXXXX---AFSLTPLGTLKCDRLDLSGNNFSNIDSVAFKSLFS 364
D+ Q AFS P +K LDLS N S+ L
Sbjct: 320 DTFQQLLSLRSLNLAWNKIAIIHPNAFSTLP-SLIK---LDLSSNLLSSFPITGLHGLTH 375
Query: 365 LKLVKINLIPNLDS 378
LKL + + +L S
Sbjct: 376 LKLTGNHALQSLIS 389
>UNIPROTKB|Q5XM32 [details] [associations]
symbol:RXFP2 "Relaxin receptor 2" species:9615 "Canis lupus
familiaris" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0016500
"protein-hormone receptor activity" evidence=IEA] [GO:0008584 "male
gonad development" evidence=IEA] [GO:0007189 "adenylate
cyclase-activating G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002172
InterPro:IPR008112 InterPro:IPR017452 Pfam:PF00001 Pfam:PF00057
PRINTS:PR00237 PRINTS:PR01739 PROSITE:PS50068 PROSITE:PS50262
PROSITE:PS51450 SMART:SM00192 GO:GO:0016021 GO:GO:0005886
GO:GO:0007189 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
GO:GO:0008584 Gene3D:4.10.400.10 InterPro:IPR023415 SUPFAM:SSF57424
PROSITE:PS01209 InterPro:IPR000372 SMART:SM00013 GO:GO:0016500
HOVERGEN:HBG026354 HOGENOM:HOG000049056 EMBL:AY749634
RefSeq:NP_001005870.1 UniGene:Cfa.16241 ProteinModelPortal:Q5XM32
SMR:Q5XM32 STRING:Q5XM32 GeneID:450220 KEGG:cfa:450220 CTD:122042
InParanoid:Q5XM32 KO:K04307 OrthoDB:EOG47M1XF NextBio:20833171
Uniprot:Q5XM32
Length = 737
Score = 192 (72.6 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 67/234 (28%), Positives = 109/234 (46%)
Query: 79 LDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVIN 138
L L NKI+ L F +L + + +N I+ +S+ F GL L+ L LS+N I+ +
Sbjct: 125 LSLKKNKIHSLPDKVFTKYTQLKQIFLQHNCITHISRKAFFGLHNLQILYLSHNCITTLR 184
Query: 139 KTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQS 198
F+D L LIL N IT ++F+ LKSL L + NN + +P + + +P
Sbjct: 185 PGVFKDLHQLTWLILDDNPITRISQ-QLFTGLKSLFFLSMVNNYLEALPKQMCAQMPQ-- 241
Query: 199 LHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXX 258
L+++ L N I+ + ++SF + +L L L +L+ L
Sbjct: 242 LNWMDLEGNGIKYLTNSSF-LSCNSLTVLFLPRNQIDFVPEKTFSSLKNLGELDLSSNMI 300
Query: 259 XAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLF---SLKLVKINLIPNLDS 309
+P + L L L+LS N + F+SL SL L +I IPN+++
Sbjct: 301 MELPPEIFKDLKLLQKLNLSSNPLLYLHKNQFESLKQLQSLDLERIE-IPNINT 353
Score = 173 (66.0 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 71/275 (25%), Positives = 117/275 (42%)
Query: 23 PSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNV-HYTLSFYIELRSLDL 81
P C C +LE C +A L VP+ ++ + L++N+I ++ + Y +L+ + L
Sbjct: 95 PQPCDCKGTELE--CINADLRAVPV-ISSNTTLLSLKKNKIHSLPDKVFTKYTQLKQIFL 151
Query: 82 SVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTA 141
N I + F + L L +S+N I+ L FK L +L L L N I+ I++
Sbjct: 152 QHNCITHISRKAFFGLHNLQILYLSHNCITTLRPGVFKDLHQLTWLILDDNPITRISQQL 211
Query: 142 FRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHY 201
F L L + NN ++ + + L + L+ N I + N+ S L SL
Sbjct: 212 FTGLKSLFFLSM-VNNYLEALPKQMCAQMPQLNWMDLEGNGIKYLTNS--SFLSCNSLTV 268
Query: 202 LYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAI 261
L+L N I+ V + +F +L NL L L L+ L +
Sbjct: 269 LFLPRNQIDFVPEKTFS-SLKNLGELDLSSNMIMELPPEIFKDLKLLQKLNLSSNPLLYL 327
Query: 262 PTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSL 296
Q L L +LDL NI++ F+ + +L
Sbjct: 328 HKNQFESLKQLQSLDLERIEIPNINTRMFQPMMNL 362
Score = 147 (56.8 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 44/130 (33%), Positives = 66/130 (50%)
Query: 75 ELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKI 134
+L +DL N I L + +F N L L + N+I + + TF LK L LDLS N I
Sbjct: 241 QLNWMDLEGNGIKYLTNSSFLSCNSLTVLFLPRNQIDFVPEKTFSSLKNLGELDLSSNMI 300
Query: 135 SVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPN-NVLSN 193
+ F+D L+ L LS N + Y ++ F SLK L+ L L+ +++PN N
Sbjct: 301 MELPPEIFKDLKLLQKLNLSSNPLLYLHKNQ-FESLKQLQSLDLER---IEIPNINTRMF 356
Query: 194 LPHQSLHYLY 203
P +L ++Y
Sbjct: 357 QPMMNLSHIY 366
>UNIPROTKB|O94898 [details] [associations]
symbol:LRIG2 "Leucine-rich repeats and immunoglobulin-like
domains protein 2" species:9606 "Homo sapiens" [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886 GO:GO:0005737
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 HOGENOM:HOG000113380
HOVERGEN:HBG052353 EMBL:AB018349 EMBL:AL161998 IPI:IPI00478892
PIR:T47152 RefSeq:NP_055628.1 UniGene:Hs.448972 UniGene:Hs.729143
ProteinModelPortal:O94898 SMR:O94898 IntAct:O94898 STRING:O94898
PhosphoSite:O94898 PaxDb:O94898 PRIDE:O94898
Ensembl:ENST00000361127 GeneID:9860 KEGG:hsa:9860 UCSC:uc001edf.1
CTD:9860 GeneCards:GC01P113615 HGNC:HGNC:20889 HPA:HPA015538
MIM:608869 neXtProt:NX_O94898 PharmGKB:PA134905053
InParanoid:O94898 OMA:FPTNHER OrthoDB:EOG41NTKF GenomeRNAi:9860
NextBio:37168 Bgee:O94898 CleanEx:HS_LRIG2 Genevestigator:O94898
GermOnline:ENSG00000198799 Uniprot:O94898
Length = 1065
Score = 194 (73.4 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 107/428 (25%), Positives = 177/428 (41%)
Query: 11 ILALTKLNKAICPSRCQCFDQKLEAS---CTDAGLEVVPIQLNPEVQTIILRENRISNVH 67
+L L +CP+ C C L+ S + L P+ + NR+SN +
Sbjct: 32 LLLLPAAGAGLCPAPCSCRIPLLDCSRRKLPAPSWRALSGLLPPDTAILDFSHNRLSNWN 91
Query: 68 YTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTL 127
+L L+ + ++ N++ + N L L++ +N I ++ + L++L
Sbjct: 92 ISLESQT-LQEVKMNYNELTEIPYFGEPTSNITL-LSLVHNIIPEINAQALQFYPALESL 149
Query: 128 DLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKS-LRILKLDNNQILDV 186
DLS N IS I ++F + L+ L LS N IT E + F +L S L ++KL+ N++ +
Sbjct: 150 DLSSNIISEIKTSSF-PRMQLKYLNLSNNRITTLE-AGCFDNLSSSLLVVKLNRNRMSMI 207
Query: 187 PNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLR 246
P + LPH L +L L N I+ V +F L +L +L + L
Sbjct: 208 PPKIFK-LPH--LQFLELKRNRIKIVEGLTFQ-GLDSLRSLKMQRNGISKLKDGAFFGLN 263
Query: 247 TLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN 306
+ + L L L L +S N I A++ F +L +++L N
Sbjct: 264 NMEELELEHNNLTRVNKGWLYGLRMLQQLYVSQNAIERISPDAWE--FCQRLSELDLSYN 321
Query: 307 -LDSIDQXXXXXXXXXXXXXXXXXAFSLTPLGTLK----CDRLDLSGNNFS-NID--SVA 358
L +D+ + G + LDL N S I+ S A
Sbjct: 322 QLTRLDESAFVGLSLLERLNLGDNRVTHIADGVFRFLSNLQTLDLRNNEISWAIEDASEA 381
Query: 359 FKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKS 417
F L SL K+ L N + SI ++AF+ LE + +N N + + F T+LK
Sbjct: 382 FAGLTSL--TKLILQGNQIKSITKKAFIGLESLEHLDLNNNA-IMSIQENAFS-QTHLKE 437
Query: 418 VSLKGNSL 425
+ L +SL
Sbjct: 438 LILNTSSL 445
Score = 160 (61.4 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 88/385 (22%), Positives = 160/385 (41%)
Query: 79 LDLSVNKINVLGSHNFEYQNKLLN-LNISYNEISALSKDTFKGLKELKTLDLSYNKISVI 137
LD S N+ L + N +++ L + ++YNE++ + + + L L +N I I
Sbjct: 80 LDFSHNR---LSNWNISLESQTLQEVKMNYNELTEIPYFG-EPTSNITLLSLVHNIIPEI 135
Query: 138 NKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQ 197
N A + LE L LS N I+ + S F ++ L+ L L NN+I + NL
Sbjct: 136 NAQALQFYPALESLDLSSNIISEIKTSS-FPRMQ-LKYLNLSNNRITTLEAGCFDNLS-S 192
Query: 198 SLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXX 257
SL + LN N + + F L +L L L L +L
Sbjct: 193 SLLVVKLNRNRMSMIPPKIFK--LPHLQFLELKRNRIKIVEGLTFQGLDSLRSLKMQRNG 250
Query: 258 XXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQXXXXX 317
+ L+ + L+L NN + ++ L+ L++++ L + ++I++
Sbjct: 251 ISKLKDGAFFGLNNMEELELEHNNLTRVNK---GWLYGLRMLQ-QLYVSQNAIERISPDA 306
Query: 318 XXXXXXXXXXXXAFS-LTPL------GTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKI 370
+++ LT L G +RL+L N ++I F+ L +L+ + +
Sbjct: 307 WEFCQRLSELDLSYNQLTRLDESAFVGLSLLERLNLGDNRVTHIADGVFRFLSNLQTLDL 366
Query: 371 --NLIPNLDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHL 428
N I AF L +I+ N +K + K F G +L+ + L N++ +
Sbjct: 367 RNNEISWAIEDASEAFAGLTSLTKLILQGNQ-IKSITKKAFIGLESLEHLDLNNNAIMSI 425
Query: 429 EASHFPLERISFLDLSDNPLHCDCN 453
+ + F + L L+ + L CDC+
Sbjct: 426 QENAFSQTHLKELILNTSSLLCDCH 450
>UNIPROTKB|F1PY08 [details] [associations]
symbol:RXFP2 "Relaxin receptor 2" species:9615 "Canis lupus
familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0004930 "G-protein coupled receptor activity" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002172
InterPro:IPR008112 InterPro:IPR017452 Pfam:PF00001 Pfam:PF00057
PRINTS:PR00237 PRINTS:PR01739 PROSITE:PS50068 PROSITE:PS50262
PROSITE:PS51450 SMART:SM00192 GO:GO:0016021 GO:GO:0004930
InterPro:IPR003591 SMART:SM00369 Gene3D:4.10.400.10
InterPro:IPR023415 SUPFAM:SSF57424 PROSITE:PS01209
InterPro:IPR000372 SMART:SM00013 GeneTree:ENSGT00650000093266
OMA:KILCCAD EMBL:AAEX03014219 Ensembl:ENSCAFT00000010501
Uniprot:F1PY08
Length = 751
Score = 192 (72.6 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 67/234 (28%), Positives = 109/234 (46%)
Query: 79 LDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVIN 138
L L NKI+ L F +L + + +N I+ +S+ F GL L+ L LS+N I+ +
Sbjct: 139 LSLKKNKIHSLPDKVFTKYTQLKQIFLQHNCITHISRKAFFGLHNLQILYLSHNCITTLR 198
Query: 139 KTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQS 198
F+D L LIL N IT ++F+ LKSL L + NN + +P + + +P
Sbjct: 199 PGVFKDLHQLTWLILDDNPITRISQ-QLFTGLKSLFFLSMVNNYLEALPKQMCAQMPQ-- 255
Query: 199 LHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXX 258
L+++ L N I+ + ++SF + +L L L +L+ L
Sbjct: 256 LNWMDLEGNGIKYLTNSSF-LSCNSLTVLFLPRNQIDFVPEKTFSSLKNLGELDLSSNMI 314
Query: 259 XAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLF---SLKLVKINLIPNLDS 309
+P + L L L+LS N + F+SL SL L +I IPN+++
Sbjct: 315 MELPPEIFKDLKLLQKLNLSSNPLLYLHKNQFESLKQLQSLDLERIE-IPNINT 367
Score = 173 (66.0 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 71/275 (25%), Positives = 117/275 (42%)
Query: 23 PSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNV-HYTLSFYIELRSLDL 81
P C C +LE C +A L VP+ ++ + L++N+I ++ + Y +L+ + L
Sbjct: 109 PQPCDCKGTELE--CINADLRAVPV-ISSNTTLLSLKKNKIHSLPDKVFTKYTQLKQIFL 165
Query: 82 SVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTA 141
N I + F + L L +S+N I+ L FK L +L L L N I+ I++
Sbjct: 166 QHNCITHISRKAFFGLHNLQILYLSHNCITTLRPGVFKDLHQLTWLILDDNPITRISQQL 225
Query: 142 FRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHY 201
F L L + NN ++ + + L + L+ N I + N+ S L SL
Sbjct: 226 FTGLKSLFFLSM-VNNYLEALPKQMCAQMPQLNWMDLEGNGIKYLTNS--SFLSCNSLTV 282
Query: 202 LYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAI 261
L+L N I+ V + +F +L NL L L L+ L +
Sbjct: 283 LFLPRNQIDFVPEKTFS-SLKNLGELDLSSNMIMELPPEIFKDLKLLQKLNLSSNPLLYL 341
Query: 262 PTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSL 296
Q L L +LDL NI++ F+ + +L
Sbjct: 342 HKNQFESLKQLQSLDLERIEIPNINTRMFQPMMNL 376
Score = 147 (56.8 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 44/130 (33%), Positives = 66/130 (50%)
Query: 75 ELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKI 134
+L +DL N I L + +F N L L + N+I + + TF LK L LDLS N I
Sbjct: 255 QLNWMDLEGNGIKYLTNSSFLSCNSLTVLFLPRNQIDFVPEKTFSSLKNLGELDLSSNMI 314
Query: 135 SVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPN-NVLSN 193
+ F+D L+ L LS N + Y ++ F SLK L+ L L+ +++PN N
Sbjct: 315 MELPPEIFKDLKLLQKLNLSSNPLLYLHKNQ-FESLKQLQSLDLER---IEIPNINTRMF 370
Query: 194 LPHQSLHYLY 203
P +L ++Y
Sbjct: 371 QPMMNLSHIY 380
>MGI|MGI:2682211 [details] [associations]
symbol:Rxfp1 "relaxin/insulin-like family peptide receptor
1" species:10090 "Mus musculus" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0004930 "G-protein coupled receptor
activity" evidence=ISO;ISA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=ISA] [GO:0007188 "adenylate cyclase-modulating G-protein
coupled receptor signaling pathway" evidence=IGI;IDA] [GO:0007189
"adenylate cyclase-activating G-protein coupled receptor signaling
pathway" evidence=ISO] [GO:0007567 "parturition" evidence=IMP]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IMP] [GO:0030198 "extracellular matrix organization"
evidence=IMP] [GO:0042562 "hormone binding" evidence=IDA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0060427 "lung
connective tissue development" evidence=IMP] [GO:0060658 "nipple
morphogenesis" evidence=IMP] InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002172 InterPro:IPR008112 InterPro:IPR017452
Pfam:PF00001 Pfam:PF00057 PRINTS:PR00237 PRINTS:PR01739
PROSITE:PS00237 PROSITE:PS50068 PROSITE:PS50262 PROSITE:PS51450
SMART:SM00192 MGI:MGI:2682211 GO:GO:0016021 GO:GO:0005886
GO:GO:0030154 GO:GO:0046872 GO:GO:0004930 GO:GO:0007189
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0030198
GO:GO:0042562 GO:GO:0007188 Gene3D:4.10.400.10 InterPro:IPR023415
SUPFAM:SSF57424 PROSITE:PS01209 GO:GO:0007567 InterPro:IPR000372
SMART:SM00013 HSSP:P01130 GO:GO:0060427 CTD:59350
HOVERGEN:HBG026354 KO:K04306 OMA:YTLTTRP GO:GO:0060658
EMBL:AY509975 EMBL:AY255542 IPI:IPI00417064 RefSeq:NP_997617.1
UniGene:Mm.331086 ProteinModelPortal:Q6R6I7 SMR:Q6R6I7
STRING:Q6R6I7 PhosphoSite:Q6R6I7 PRIDE:Q6R6I7
Ensembl:ENSMUST00000078527 GeneID:381489 KEGG:mmu:381489
UCSC:uc008pnv.1 GeneTree:ENSGT00650000093266 HOGENOM:HOG000049056
InParanoid:Q6R6I7 OrthoDB:EOG4NGGM1 ChiTaRS:RXFP1 NextBio:402138
Bgee:Q6R6I7 CleanEx:MM_RXFP1 Genevestigator:Q6R6I7 Uniprot:Q6R6I7
Length = 758
Score = 192 (72.6 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 74/275 (26%), Positives = 114/275 (41%)
Query: 23 PSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYT-LSFYIELRSLDL 81
P C C D LE C +A L VP ++ V + L+ N I + Y EL+ L L
Sbjct: 101 PMHCLCRD--LELDCDEANLRAVP-SVSSNVTVMSLQRNFIRTLPPNGFRKYHELQKLCL 157
Query: 82 SVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTA 141
N+I+ + F L L +S+N I+ L F+ L L+ L + N +S I+
Sbjct: 158 QNNRIHSVSVSAFRGLRSLTKLYLSHNRITFLKPGVFEDLHRLEWLIIEDNHLSRISPLT 217
Query: 142 FRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHY 201
F L LL+L N +T D + + L L + N+I ++ N L+ + +L
Sbjct: 218 FYGLNSLILLVLMNNALTRLPDKPLCQHMPRLHWLDFEGNRIHNLRN--LTFISCNNLTV 275
Query: 202 LYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAI 261
L + +N I + +++F L L L L L+ L I
Sbjct: 276 LVMRKNKINYLNEHAFTH-LQKLDELDLGSNKIENLPPNIFKDLKELSQLNISYNPIQKI 334
Query: 262 PTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSL 296
Q L+ L +L L G SNI F+ L +L
Sbjct: 335 EVNQFDCLAKLKSLSLEGIEISNIQQRMFRPLINL 369
Score = 139 (54.0 bits), Expect = 8.3e-06, P = 8.3e-06
Identities = 52/176 (29%), Positives = 81/176 (46%)
Query: 51 PEVQTIILRENRISNVHYTLSFYIELRSLDLSV---NKINVLGSHNFEYQNKLLNLNISY 107
P + + NRI N+ L+F I +L + V NKIN L H F + KL L++
Sbjct: 247 PRLHWLDFEGNRIHNLR-NLTF-ISCNNLTVLVMRKNKINYLNEHAFTHLQKLDELDLGS 304
Query: 108 NEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIF 167
N+I L + FK LKEL L++SYN I I F L+ L L I+ + +F
Sbjct: 305 NKIENLPPNIFKDLKELSQLNISYNPIQKIEVNQFDCLAKLKSLSLEGIEISNIQQ-RMF 363
Query: 168 SSLKSLRILKLDNNQILDVPNNVLSNLPH-QSLHYLYLNENLIETVLDNSFPFTLT 222
L +L + Q +V S P+ + L ENL+ +++ F + ++
Sbjct: 364 RPLINLSHIYFKKFQYCGYAPHVRSCKPNTDGISSL---ENLLASIIQRVFVWVVS 416
Score = 130 (50.8 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 53/229 (23%), Positives = 88/229 (38%)
Query: 77 RSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISV 136
R L+L ++ N+ + + + +++ N I L + F+ EL+ L L N+I
Sbjct: 107 RDLELDCDEANLRAVPSVS--SNVTVMSLQRNFIRTLPPNGFRKYHELQKLCLQNNRIHS 164
Query: 137 INKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPH 196
++ +AFR L L LS N IT+ + +F L L L +++N + + L
Sbjct: 165 VSVSAFRGLRSLTKLYLSHNRITFLKPG-VFEDLHRLEWLIIEDNHLSRISPLTFYGL-- 221
Query: 197 QSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXX 256
SL L L N + + D + LH L ++ L
Sbjct: 222 NSLILLVLMNNALTRLPDKPLCQHMPRLHWLDFEGNRIHNLRNLTFISCNNLTVLVMRKN 281
Query: 257 XXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIP 305
+ + L L LDL N N+ FK L L + I+ P
Sbjct: 282 KINYLNEHAFTHLQKLDELDLGSNKIENLPPNIFKDLKELSQLNISYNP 330
>UNIPROTKB|F1NVW6 [details] [associations]
symbol:F1NVW6 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000902 "cell morphogenesis" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007599 "hemostasis"
evidence=IEA] [GO:0031362 "anchored to external side of plasma
membrane" evidence=IEA] [GO:0042730 "fibrinolysis" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0042730 InterPro:IPR003591
SMART:SM00369 GO:GO:0007155 InterPro:IPR000372 SMART:SM00013
GO:GO:0031362 GeneTree:ENSGT00690000102197 EMBL:AADN02063514
EMBL:AADN02063515 IPI:IPI00571680 ProteinModelPortal:F1NVW6
Ensembl:ENSGALT00000035204 OMA:LTENPWH Uniprot:F1NVW6
Length = 225
Score = 167 (63.8 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 64/203 (31%), Positives = 97/203 (47%)
Query: 22 CPSR--CQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSFY--IELR 77
CPSR C C +CT L VP L ++L NR+ +V T +F L+
Sbjct: 2 CPSRDGCSC----PTVNCTGRDLSAVPAGLPENTGILLLNANRLLSVS-TAAFQKLAALQ 56
Query: 78 SLDLSVNKIN-VLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISV 136
LDLS N + VL +LL +S+N + AL +GL L L L++NK+
Sbjct: 57 DLDLSDNGLQAVLTEAALPSLKELL---LSHNALEALP--ALQGLPALTRLALAHNKLQA 111
Query: 137 INKTAFRDTLHLELLILSFNNI-TYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLP 195
+ AFR L+ L L N + T ED+ F L+ L+ L L +N + ++P +L +L
Sbjct: 112 LAPAAFRAVPQLQDLDLRGNALRTLPEDA--FMGLRVLKDLDLSDNALEELPRGLLQDLV 169
Query: 196 HQSLHYLYLNENLIETVLDNSFP 218
+L L+L+ N + + FP
Sbjct: 170 --TLETLWLSGNRLRALPSGFFP 190
Score = 125 (49.1 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 42/144 (29%), Positives = 70/144 (48%)
Query: 31 QKLEASCTDAGLEVVPIQLN-PEVQTIILRENRISNVHYTLSFYIELRSLDLSVNKINVL 89
Q L+ S D GL+ V + P ++ ++L N + + L L L L+ NK+ L
Sbjct: 56 QDLDLS--DNGLQAVLTEAALPSLKELLLSHNALEALP-ALQGLPALTRLALAHNKLQAL 112
Query: 90 GSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLE 149
F +L +L++ N + L +D F GL+ LK LDLS N + + + +D + LE
Sbjct: 113 APAAFRAVPQLQDLDLRGNALRTLPEDAFMGLRVLKDLDLSDNALEELPRGLLQDLVTLE 172
Query: 150 LLILSFNNIT-----YFEDSEIFS 168
L LS N + +F + +F+
Sbjct: 173 TLWLSGNRLRALPSGFFPEGHLFA 196
Score = 123 (48.4 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 46/182 (25%), Positives = 87/182 (47%)
Query: 277 LSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQXXXXXXXXXXXXXXXXXAFSLTP 335
L+ N ++ + AF+ L +L+ ++L N L ++ A P
Sbjct: 36 LNANRLLSVSTAAFQKLAALQ--DLDLSDNGLQAV--LTEAALPSLKELLLSHNALEALP 91
Query: 336 L--GTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQRAFVDNIQLET 392
G RL L+ N + AF+++ L+ ++L N L ++ + AF+ L+
Sbjct: 92 ALQGLPALTRLALAHNKLQALAPAAFRAVPQLQ--DLDLRGNALRTLPEDAFMGLRVLKD 149
Query: 393 VIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFPLERI-SFLDLSDNPLHCD 451
+ +++N L++LP L Q L+++ L GN L L + FP + +++ L++NP HCD
Sbjct: 150 LDLSDNA-LEELPRGLLQDLVTLETLWLSGNRLRALPSGFFPEGHLFAYVFLTENPWHCD 208
Query: 452 CN 453
C+
Sbjct: 209 CD 210
>FB|FBgn0243486 [details] [associations]
symbol:rdo "reduced ocelli" species:7227 "Drosophila
melanogaster" [GO:0008056 "ocellus development" evidence=IMP]
InterPro:IPR001611 PROSITE:PS51450 EMBL:AE014134 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 GeneTree:ENSGT00700000104286
GO:GO:0008056 EMBL:BT004502 RefSeq:NP_609861.1 UniGene:Dm.21796
SMR:Q9VJA9 MINT:MINT-990018 STRING:Q9VJA9
EnsemblMetazoa:FBtr0081029 GeneID:35077 KEGG:dme:Dmel_CG15151
UCSC:CG15151-RA CTD:35077 FlyBase:FBgn0243486 InParanoid:Q9VJA9
OMA:FRGQDNL OrthoDB:EOG4CZ8WX GenomeRNAi:35077 NextBio:791738
Uniprot:Q9VJA9
Length = 741
Score = 195 (73.7 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 59/198 (29%), Positives = 100/198 (50%)
Query: 4 FLTCIFLILALTKLNKAICPSRCQC-FDQ--KLEASCTDAGLEVV--PIQLNPEVQTIIL 58
F CI + A+ K CP+ CQC D + +A CT GL + P +L+ +V+ II+
Sbjct: 8 FSLCI--MPAMFSNTKRKCPTECQCSMDDLDRYQAICTKGGLNSLLSPNELDVDVKVIII 65
Query: 59 RENRIS-NVHYTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDT 117
R R S + L +++L L ++ + + +G+ +F L L++S N I+ ++++
Sbjct: 66 RGPRNSITIGPALRQFMKLEILRITDSNLPAIGAESFWGLKYLRILDLSKNNITNITENN 125
Query: 118 FKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILK 177
F+G L LDLS NK+ + + FR L L L+ N+I F L L+ L
Sbjct: 126 FRGQDNLLELDLSKNKVLRMASSTFRHLTDLRRLNLADNSIVELVQRNFFM-LSRLKYLD 184
Query: 178 LDNNQILDVPNNVLSNLP 195
L N + D+ +V ++P
Sbjct: 185 LSGNPLQDLQPDVFRDVP 202
Score = 172 (65.6 bits), Expect = 4.9e-09, Sum P(2) = 4.9e-09
Identities = 68/281 (24%), Positives = 123/281 (43%)
Query: 76 LRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKIS 135
LR LDLS N I + +NF Q+ LL L++S N++ ++ TF+ L +L+ L+L+ N I
Sbjct: 108 LRILDLSKNNITNITENNFRGQDNLLELDLSKNKVLRMASSTFRHLTDLRRLNLADNSIV 167
Query: 136 VINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLP 195
+ + F L+ L LS N + + ++F + L++LK N Q+ + + + LP
Sbjct: 168 ELVQRNFFMLSRLKYLDLSGNPLQDLQP-DVFRDVPELKVLKCRNCQLKKINPQMYNLLP 226
Query: 196 HQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXX 255
L L L N + + + F + L + L ++L+
Sbjct: 227 --LLSELDLGRNEFKFLDKDEFR-DVKRLTKVLLDGNQLSVVVDQLFRMQKSLNHLDLSY 283
Query: 256 XXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKI--NLIPNLDSIDQX 313
+P +L+ L LDLS N ++ + +SL +L + I N++ +L + +
Sbjct: 284 NRLAKVPNDSFLQLTNLTFLDLSYNKLVRLEPQSIRSLSNLLTLNISGNVLMDLREMRET 343
Query: 314 XXXXXXXXXXXXXXXXAFSLTPLGTLKCDR-LDLSGNNFSN 353
+ L K R L++SGN+ +N
Sbjct: 344 FELIPQLTHLAIADMGTMPVGLLHPFKQLRYLNISGNSLNN 384
Score = 146 (56.5 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 80/335 (23%), Positives = 139/335 (41%)
Query: 123 ELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQ 182
+L+ L ++ + + I +F +L +L LS NNIT ++ F +L L L N+
Sbjct: 83 KLEILRITDSNLPAIGAESFWGLKYLRILDLSKNNITNITENN-FRGQDNLLELDLSKNK 141
Query: 183 ILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXX 242
+L + ++ +L L L L +N I ++ +F F L+ L L L
Sbjct: 142 VLRMASSTFRHLT--DLRRLNLADNSIVELVQRNF-FMLSRLKYLDLSGNPLQDLQPDVF 198
Query: 243 VTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
+ L I + + L L LDL N F +D F+ + +L K+
Sbjct: 199 RDVPELKVLKCRNCQLKKINPQMYNLLPLLSELDLGRNEFKFLDKDEFRDV--KRLTKVL 256
Query: 303 LIPNLDSI--DQXXXXXXXXXXXXXXXXXAFSLTPLGTLKCDRL---DLSGNNFSNIDSV 357
L N S+ DQ + L+ L DLS N ++
Sbjct: 257 LDGNQLSVVVDQLFRMQKSLNHLDLSYNRLAKVPNDSFLQLTNLTFLDLSYNKLVRLEPQ 316
Query: 358 AFKSLFSLKLVKINLIPNLDSIDQRAFVDNIQLETVIINENM-NLKQLPSKLFQGNTNLK 416
+ +SL +L + +N+ N+ +D R + +L + + + ++ +P L L+
Sbjct: 317 SIRSLSNL--LTLNISGNV-LMDLREMRETFELIPQLTHLAIADMGTMPVGLLHPFKQLR 373
Query: 417 SVSLKGNSLSH--LEASHFPLERISFLDLSDNPLH 449
+++ GNSL++ LE P + FLDLS N LH
Sbjct: 374 YLNISGNSLNNTALEVID-PCRELEFLDLSRNQLH 407
Score = 144 (55.7 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 54/173 (31%), Positives = 84/173 (48%)
Query: 58 LRENRISNV-HYTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKD 116
L +N++ + T +LR L+L+ N I L NF ++L L++S N + L D
Sbjct: 137 LSKNKVLRMASSTFRHLTDLRRLNLADNSIVELVQRNFFMLSRLKYLDLSGNPLQDLQPD 196
Query: 117 TFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRIL 176
F+ + ELK L ++ IN + L L L N + + E F +K L +
Sbjct: 197 VFRDVPELKVLKCRNCQLKKINPQMYNLLPLLSELDLGRNEFKFLDKDE-FRDVKRLTKV 255
Query: 177 KLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLAL 229
LD NQ L V + L + +SL++L L+ N + V ++SF LTNL L L
Sbjct: 256 LLDGNQ-LSVVVDQLFRM-QKSLNHLDLSYNRLAKVPNDSF-LQLTNLTFLDL 305
Score = 43 (20.2 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 18/67 (26%), Positives = 32/67 (47%)
Query: 389 QLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHL-EASHFPLERISFLDLSDNP 447
QL + I+ N +L ++ L+ + L N L + E + ++ I + L +NP
Sbjct: 371 QLRYLNISGN-SLNNTALEVIDPCRELEFLDLSRNQLHGISEDTVLRIQGIRNVRLDNNP 429
Query: 448 LHCD-CN 453
L CD C+
Sbjct: 430 LICDECH 436
>UNIPROTKB|E1C0J7 [details] [associations]
symbol:PXDNL "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004601 "peroxidase activity" evidence=IEA] [GO:0006979
"response to oxidative stress" evidence=IEA] [GO:0020037 "heme
binding" evidence=IEA] InterPro:IPR001611 InterPro:IPR002007
InterPro:IPR007110 InterPro:IPR010255 InterPro:IPR019791
Pfam:PF03098 PRINTS:PR00457 PROSITE:PS50292 PROSITE:PS50835
PROSITE:PS51450 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0006979
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0020037
GO:GO:0004601 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 SUPFAM:SSF48113 Gene3D:1.10.640.10 InterPro:IPR022409
SMART:SM00089 GeneTree:ENSGT00550000074325 EMBL:AADN02019209
IPI:IPI00576786 ProteinModelPortal:E1C0J7
Ensembl:ENSGALT00000009463 Uniprot:E1C0J7
Length = 1411
Score = 195 (73.7 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 55/177 (31%), Positives = 84/177 (47%)
Query: 9 FLILALTKLNKAICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHY 68
FL L + CP RC CF + C LE +P + P+ + LR N I +
Sbjct: 11 FLCFLLLPASSRSCPPRCLCF--RTTVRCMHLMLETIP-DIPPQTSILDLRFNHIREIQP 67
Query: 69 TLSFYIE-LRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTL 127
++ L +L L+ N+I + +FE L L + NEI ++ + F GL+ L+ L
Sbjct: 68 GAFRRLKNLNTLLLNNNQIKHIVRRSFEDLENLKYLYLYKNEIQSIQQHAFHGLRSLEQL 127
Query: 128 DLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQIL 184
L +N + + F D LE L L N I+ FS L+SL+ L+LD+N +L
Sbjct: 128 YLHFNSLETLEPETFSDLPKLERLFLHNNKISRIHPGT-FSQLESLKRLRLDSNALL 183
>UNIPROTKB|E1C0J1 [details] [associations]
symbol:PXDNL "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004601 "peroxidase activity" evidence=IEA] [GO:0006979
"response to oxidative stress" evidence=IEA] [GO:0020037 "heme
binding" evidence=IEA] InterPro:IPR001611 InterPro:IPR002007
InterPro:IPR007110 InterPro:IPR010255 InterPro:IPR019791
Pfam:PF03098 PRINTS:PR00457 PROSITE:PS50292 PROSITE:PS50835
PROSITE:PS51450 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0006979
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0020037
GO:GO:0004601 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 SUPFAM:SSF48113 Gene3D:1.10.640.10 InterPro:IPR022409
SMART:SM00089 GeneTree:ENSGT00550000074325 OMA:GGRYECQ
EMBL:AADN02019209 IPI:IPI00599639 ProteinModelPortal:E1C0J1
Ensembl:ENSGALT00000009466 Uniprot:E1C0J1
Length = 1424
Score = 195 (73.7 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 55/177 (31%), Positives = 84/177 (47%)
Query: 9 FLILALTKLNKAICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHY 68
FL L + CP RC CF + C LE +P + P+ + LR N I +
Sbjct: 11 FLCFLLLPASSRSCPPRCLCF--RTTVRCMHLMLETIP-DIPPQTSILDLRFNHIREIQP 67
Query: 69 TLSFYIE-LRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTL 127
++ L +L L+ N+I + +FE L L + NEI ++ + F GL+ L+ L
Sbjct: 68 GAFRRLKNLNTLLLNNNQIKHIVRRSFEDLENLKYLYLYKNEIQSIQQHAFHGLRSLEQL 127
Query: 128 DLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQIL 184
L +N + + F D LE L L N I+ FS L+SL+ L+LD+N +L
Sbjct: 128 YLHFNSLETLEPETFSDLPKLERLFLHNNKISRIHPGT-FSQLESLKRLRLDSNALL 183
>UNIPROTKB|Q92626 [details] [associations]
symbol:PXDN "Peroxidasin homolog" species:9606 "Homo
sapiens" [GO:0046872 "metal ion binding" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] [GO:0005152
"interleukin-1 receptor antagonist activity" evidence=NAS]
[GO:0006955 "immune response" evidence=NAS] [GO:0004601 "peroxidase
activity" evidence=IDA] [GO:0005201 "extracellular matrix
structural constituent" evidence=IDA] [GO:0031012 "extracellular
matrix" evidence=IDA] [GO:0030198 "extracellular matrix
organization" evidence=IDA] [GO:0042744 "hydrogen peroxide
catabolic process" evidence=IDA] [GO:0020037 "heme binding"
evidence=IDA] [GO:0055114 "oxidation-reduction process"
evidence=IDA] [GO:0005615 "extracellular space" evidence=IDA]
[GO:0005783 "endoplasmic reticulum" evidence=IDA] [GO:0001960
"negative regulation of cytokine-mediated signaling pathway"
evidence=NAS] InterPro:IPR001611 InterPro:IPR001007
InterPro:IPR002007 InterPro:IPR007110 InterPro:IPR010255
InterPro:IPR019791 Pfam:PF00093 Pfam:PF03098 PRINTS:PR00457
PROSITE:PS00436 PROSITE:PS01208 PROSITE:PS50184 PROSITE:PS50292
PROSITE:PS50835 PROSITE:PS51450 SMART:SM00214 GO:GO:0005783
GO:GO:0005615 EMBL:CH471053 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0006955 GO:GO:0046872 GO:GO:0005578 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0030198 GO:GO:0020037 GO:GO:0031012
GO:GO:0004601 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GO:GO:0042744 SUPFAM:SSF48113 PROSITE:PS00435
Orphanet:289499 GO:GO:0005201 Gene3D:1.10.640.10 GO:GO:0005152
CleanEx:HS_PRG2 HSSP:P05164 eggNOG:NOG262194 HOGENOM:HOG000016084
HOVERGEN:HBG108312 EMBL:AF200348 EMBL:EF090903 EMBL:D86983
EMBL:BC098579 IPI:IPI00016112 IPI:IPI00791587 RefSeq:NP_036425.1
UniGene:Hs.332197 ProteinModelPortal:Q92626 SMR:Q92626
IntAct:Q92626 STRING:Q92626 PeroxiBase:3355 PhosphoSite:Q92626
DMDM:172045828 PaxDb:Q92626 PRIDE:Q92626 DNASU:7837
Ensembl:ENST00000252804 GeneID:7837 KEGG:hsa:7837 UCSC:uc002qxa.3
UCSC:uc002qxb.1 CTD:7837 GeneCards:GC02M001635 HGNC:HGNC:14966
HPA:HPA012375 MIM:605158 neXtProt:NX_Q92626 PharmGKB:PA128394535
InParanoid:Q92626 OMA:EPVITWN OrthoDB:EOG4J1179 ChiTaRS:PXDN
GenomeRNAi:7837 NextBio:30238 ArrayExpress:Q92626 Bgee:Q92626
CleanEx:HS_PXDN Genevestigator:Q92626 Uniprot:Q92626
Length = 1479
Score = 200 (75.5 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 61/183 (33%), Positives = 93/183 (50%)
Query: 5 LTCIFLILALTKLNK-AICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRI 63
L C + LA+ A CPSRC CF + C LE VP + P+ + LR NRI
Sbjct: 18 LFCAWGTLAVVAQKPGAGCPSRCLCF--RTTVRCMHLLLEAVPA-VAPQTSILDLRFNRI 74
Query: 64 SNVHYTLSFYIELRSLD---LSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKG 120
+ + LR+L+ L+ N+I + S FE L L + NEI ++ + FKG
Sbjct: 75 REIQP--GAFRRLRNLNTLLLNNNQIKRIPSGAFEDLENLKYLYLYKNEIQSIDRQAFKG 132
Query: 121 LKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDN 180
L L+ L L +N+I ++ +F+ LE L L N IT+ F+ L+S++ L+LD+
Sbjct: 133 LASLEQLYLHFNQIETLDPDSFQHLPKLERLFLHNNRITHLVPGT-FNHLESMKRLRLDS 191
Query: 181 NQI 183
N +
Sbjct: 192 NTL 194
Score = 136 (52.9 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 42/131 (32%), Positives = 63/131 (48%)
Query: 79 LDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVIN 138
LDL N+I + F L L ++ N+I + F+ L+ LK L L N+I I+
Sbjct: 67 LDLRFNRIREIQPGAFRRLRNLNTLLLNNNQIKRIPSGAFEDLENLKYLYLYKNEIQSID 126
Query: 139 KTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQS 198
+ AF+ LE L L FN I D + F L L L L NN+I + ++L +S
Sbjct: 127 RQAFKGLASLEQLYLHFNQIETL-DPDSFQHLPKLERLFLHNNRITHLVPGTFNHL--ES 183
Query: 199 LHYLYLNENLI 209
+ L L+ N +
Sbjct: 184 MKRLRLDSNTL 194
Score = 45 (20.9 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 22/95 (23%), Positives = 34/95 (35%)
Query: 514 CSSPPDIKGLEVKAVPENSVHCESNTMXXXXXXXXXXXXXGVICILMYFIYRKRALWKNK 573
C P I+G V + ++CE + V YF R K +
Sbjct: 222 CEYPRRIQGRSVATITPEELNCERPRITSEPQDADVTSGNTV-----YFTCRAEGNPKPE 276
Query: 574 IN--RNLKHQSSYVDNCMNSHPTPILMLYSTGDSD 606
I RN S D+ +N LM+ +T ++D
Sbjct: 277 IIWLRNNNELSMKTDSRLNLLDDGTLMIQNTQETD 311
>UNIPROTKB|O94933 [details] [associations]
symbol:SLITRK3 "SLIT and NTRK-like protein 3" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 GO:GO:0016021 EMBL:CH471052 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 HOGENOM:HOG000290667
HOVERGEN:HBG056407 EMBL:AB020655 EMBL:AK290024 EMBL:BC114621
IPI:IPI00016467 RefSeq:NP_055741.2 UniGene:Hs.101745
ProteinModelPortal:O94933 SMR:O94933 STRING:O94933
PhosphoSite:O94933 PRIDE:O94933 Ensembl:ENST00000241274
Ensembl:ENST00000475390 GeneID:22865 KEGG:hsa:22865 UCSC:uc003fej.4
CTD:22865 GeneCards:GC03M164904 H-InvDB:HIX0003827 HGNC:HGNC:23501
HPA:HPA017636 MIM:609679 neXtProt:NX_O94933 PharmGKB:PA134958002
eggNOG:NOG292495 InParanoid:O94933 OMA:IAPYQTR OrthoDB:EOG473PQR
PhylomeDB:O94933 GenomeRNAi:22865 NextBio:43383 ArrayExpress:O94933
Bgee:O94933 CleanEx:HS_SLITRK3 Genevestigator:O94933
GermOnline:ENSG00000121871 Uniprot:O94933
Length = 977
Score = 146 (56.5 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 64/211 (30%), Positives = 96/211 (45%)
Query: 21 ICPSRCQCF----DQKLEASCTDAGL----EVVPIQLNPEVQTIILRENRISNVHYTLSF 72
ICP+ C C D L +C + G E++P LN + + L N I + Y F
Sbjct: 372 ICPTGCTCNLHINDLGLTVNCKERGFNNISELLPRPLN--AKKLYLSSNLIQKI-YRSDF 428
Query: 73 YIELRSLDL---SVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDL 129
+ SLDL N+I+ + F L +L ++ N+I L+ F+GL+ L L
Sbjct: 429 W-NFSSLDLLHLGNNRISYVQDGAFINLPNLKSLFLNGNDIEKLTPGMFRGLQSLHYLYF 487
Query: 130 SYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNN 189
+N I I AF +L+LL L+ NN+ ++ F+ SL L L N L +P
Sbjct: 488 EFNVIREIQPAAFSLMPNLKLLFLN-NNLLRTLPTDAFAGT-SLARLNLRKNYFLYLP-- 543
Query: 190 VLSNLPH-QSLHYLYLNENLIETVLDNSFPF 219
V L H ++ + LNEN + D PF
Sbjct: 544 VAGVLEHLNAIVQIDLNENPWDCTCD-LVPF 573
Score = 145 (56.1 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 44/149 (29%), Positives = 71/149 (47%)
Query: 64 SNVHYTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKE 123
+N+ F+ L L N + L +++F + N +++N+ N + + F GLK
Sbjct: 67 TNISQITEFWSRPFKLYLQRNSMRKLYTNSFLHLNNAVSINLGNNALQDIQTGAFNGLKI 126
Query: 124 LKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQI 183
LK L L NK+ V F LE L +N I E S F +L LR+L L++N I
Sbjct: 127 LKRLYLHENKLDVFRNDTFLGLESLEYLQADYNVIKRIE-SGAFRNLSKLRVLILNDNLI 185
Query: 184 LDVPNNVLSNLPHQSLHYLYLNENLIETV 212
+P N+ + SL +L L N ++ +
Sbjct: 186 PMLPTNLFKAV---SLTHLDLRGNRLKVL 211
Score = 125 (49.1 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 51/169 (30%), Positives = 74/169 (43%)
Query: 125 KTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQIL 184
K L LS N I I ++ F + L+LL L N I+Y +D F +L +L+ L L+ N I
Sbjct: 411 KKLYLSSNLIQKIYRSDFWNFSSLDLLHLGNNRISYVQDGA-FINLPNLKSLFLNGNDIE 469
Query: 185 DVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVT 244
+ + L QSLHYLY N+I + +F + NL L L
Sbjct: 470 KLTPGMFRGL--QSLHYLYFEFNVIREIQPAAFSL-MPNLKLLFLNNNLLRTLPTDAFAG 526
Query: 245 LRTLHXXXXXXXXXXAIPTKQ-LSKLSALVNLDLSGNNFS-NIDSVAFK 291
+L +P L L+A+V +DL+ N + D V FK
Sbjct: 527 T-SLARLNLRKNYFLYLPVAGVLEHLNAIVQIDLNENPWDCTCDLVPFK 574
Score = 114 (45.2 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 38/131 (29%), Positives = 61/131 (46%)
Query: 95 EYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILS 154
E+ ++ L + N + L ++F L +++L N + I AF L+ L L
Sbjct: 74 EFWSRPFKLYLQRNSMRKLYTNSFLHLNNAVSINLGNNALQDIQTGAFNGLKILKRLYLH 133
Query: 155 FNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLD 214
N + F + + F L+SL L+ D N I + + NL L L LN+NLI +
Sbjct: 134 ENKLDVFRN-DTFLGLESLEYLQADYNVIKRIESGAFRNL--SKLRVLILNDNLIPMLPT 190
Query: 215 NSFP-FTLTNL 224
N F +LT+L
Sbjct: 191 NLFKAVSLTHL 201
Score = 98 (39.6 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 34/114 (29%), Positives = 57/114 (50%)
Query: 344 LDLSGNNFSNIDSVAFKSLFSLKLV--KINLIPNLDSIDQRAFVDNIQLETVIINENMNL 401
L L+GN+ + F+ L SL + + N+I I AF L+ + +N N+ L
Sbjct: 461 LFLNGNDIEKLTPGMFRGLQSLHYLYFEFNVIRE---IQPAAFSLMPNLKLLFLNNNL-L 516
Query: 402 KQLPSKLFQGNTNLKSVSLKGNSLSHLEASHF--PLERISFLDLSDNPLHCDCN 453
+ LP+ F G T+L ++L+ N +L + L I +DL++NP C C+
Sbjct: 517 RTLPTDAFAG-TSLARLNLRKNYFLYLPVAGVLEHLNAIVQIDLNENPWDCTCD 569
Score = 72 (30.4 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 29/114 (25%), Positives = 45/114 (39%)
Query: 167 FSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHT 226
F L + + L NN + D+ + L + L LYL+EN ++ +++F L +L
Sbjct: 97 FLHLNNAVSINLGNNALQDIQTGAFNGL--KILKRLYLHENKLDVFRNDTF-LGLESLEY 153
Query: 227 LALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGN 280
L L L +PT L K +L +LDL GN
Sbjct: 154 LQADYNVIKRIESGAFRNLSKLRVLILNDNLIPMLPTN-LFKAVSLTHLDLRGN 206
Score = 56 (24.8 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 25/93 (26%), Positives = 42/93 (45%)
Query: 351 FSNIDSVAFKSLFSLKL-VKINLIPNLDSIDQRAFVDNIQLETVIINENMNLKQLPSKLF 409
F+NI + + L + KL + NLI + D F + L+ + + N + + F
Sbjct: 397 FNNISELLPRPLNAKKLYLSSNLIQKIYRSD---FWNFSSLDLLHLGNN-RISYVQDGAF 452
Query: 410 QGNTNLKSVSLKGNSLSHLEASHFP-LERISFL 441
NLKS+ L GN + L F L+ + +L
Sbjct: 453 INLPNLKSLFLNGNDIEKLTPGMFRGLQSLHYL 485
Score = 47 (21.6 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 52 EVQTIILRENRISNVHYTLSFYIELRSLDLSVNKINVL 89
+++ +IL +N I + L + L LDL N++ VL
Sbjct: 174 KLRVLILNDNLIPMLPTNLFKAVSLTHLDLRGNRLKVL 211
>RGD|1310506 [details] [associations]
symbol:Slitrk3 "SLIT and NTRK-like family, member 3"
species:10116 "Rattus norvegicus" [GO:0007409 "axonogenesis"
evidence=IEA;ISO] RGD:1310506 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007409 InterPro:IPR000372
SMART:SM00013 EMBL:CH473976 GeneTree:ENSGT00680000099775 CTD:22865
OMA:IAPYQTR OrthoDB:EOG473PQR IPI:IPI00202395 RefSeq:NP_001101153.1
UniGene:Rn.68333 Ensembl:ENSRNOT00000013009 GeneID:310519
KEGG:rno:310519 UCSC:RGD:1310506 NextBio:662093 Uniprot:D4A062
Length = 979
Score = 146 (56.5 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 64/211 (30%), Positives = 96/211 (45%)
Query: 21 ICPSRCQCF----DQKLEASCTDAGL----EVVPIQLNPEVQTIILRENRISNVHYTLSF 72
ICP+ C C D L +C + G E++P LN + + L N I + Y F
Sbjct: 372 ICPTGCTCNLHINDLGLTVNCKERGFNNISELLPRPLN--AKKLYLSSNLIQKI-YRSDF 428
Query: 73 YIELRSLDL---SVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDL 129
+ SLDL N+I+ + F L +L ++ N+I L+ F+GL+ L L
Sbjct: 429 W-NFSSLDLLHLGNNRISYVQDGAFINLPNLKSLFLNGNDIEKLTPGMFRGLQSLHYLYF 487
Query: 130 SYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNN 189
+N I I AF +L+LL L+ NN+ ++ F+ SL L L N L +P
Sbjct: 488 EFNVIREIQPAAFSLMPNLKLLFLN-NNLLRTLPTDAFAGT-SLARLNLRKNYFLYLP-- 543
Query: 190 VLSNLPH-QSLHYLYLNENLIETVLDNSFPF 219
V L H ++ + LNEN + D PF
Sbjct: 544 VAGVLEHLNAIVQIDLNENPWDCTCD-LVPF 573
Score = 145 (56.1 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 44/149 (29%), Positives = 71/149 (47%)
Query: 64 SNVHYTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKE 123
+N+ F+ L L N + L +++F + N +++N+ N + + F GLK
Sbjct: 67 TNISQITEFWSRPFKLYLQRNSMRKLYTNSFLHLNNAVSINLGNNALQDIQTGAFNGLKI 126
Query: 124 LKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQI 183
LK L L NK+ V F LE L +N I E S F +L LR+L L++N I
Sbjct: 127 LKRLYLHENKLDVFRNDTFLGLESLEYLQADYNVIKRIE-SGAFRNLSKLRVLILNDNLI 185
Query: 184 LDVPNNVLSNLPHQSLHYLYLNENLIETV 212
+P N+ + SL +L L N ++ +
Sbjct: 186 PVLPTNLFKAV---SLTHLDLRGNRLKVL 211
Score = 125 (49.1 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 51/169 (30%), Positives = 74/169 (43%)
Query: 125 KTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQIL 184
K L LS N I I ++ F + L+LL L N I+Y +D F +L +L+ L L+ N I
Sbjct: 411 KKLYLSSNLIQKIYRSDFWNFSSLDLLHLGNNRISYVQDGA-FINLPNLKSLFLNGNDIE 469
Query: 185 DVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVT 244
+ + L QSLHYLY N+I + +F + NL L L
Sbjct: 470 KLTPGMFRGL--QSLHYLYFEFNVIREIQPAAFSL-MPNLKLLFLNNNLLRTLPTDAFAG 526
Query: 245 LRTLHXXXXXXXXXXAIPTKQ-LSKLSALVNLDLSGNNFS-NIDSVAFK 291
+L +P L L+A+V +DL+ N + D V FK
Sbjct: 527 T-SLARLNLRKNYFLYLPVAGVLEHLNAIVQIDLNENPWDCTCDLVPFK 574
Score = 115 (45.5 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 38/131 (29%), Positives = 61/131 (46%)
Query: 95 EYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILS 154
E+ ++ L + N + L ++F L +++L N + I AF L+ L L
Sbjct: 74 EFWSRPFKLYLQRNSMRKLYTNSFLHLNNAVSINLGNNALQDIQTGAFNGLKILKRLYLH 133
Query: 155 FNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLD 214
N + F + + F L+SL L+ D N I + + NL L L LN+NLI +
Sbjct: 134 ENKLDVFRN-DTFLGLESLEYLQADYNVIKRIESGAFRNL--SKLRVLILNDNLIPVLPT 190
Query: 215 NSFP-FTLTNL 224
N F +LT+L
Sbjct: 191 NLFKAVSLTHL 201
Score = 98 (39.6 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 34/114 (29%), Positives = 57/114 (50%)
Query: 344 LDLSGNNFSNIDSVAFKSLFSLKLV--KINLIPNLDSIDQRAFVDNIQLETVIINENMNL 401
L L+GN+ + F+ L SL + + N+I I AF L+ + +N N+ L
Sbjct: 461 LFLNGNDIEKLTPGMFRGLQSLHYLYFEFNVIRE---IQPAAFSLMPNLKLLFLNNNL-L 516
Query: 402 KQLPSKLFQGNTNLKSVSLKGNSLSHLEASHF--PLERISFLDLSDNPLHCDCN 453
+ LP+ F G T+L ++L+ N +L + L I +DL++NP C C+
Sbjct: 517 RTLPTDAFAG-TSLARLNLRKNYFLYLPVAGVLEHLNAIVQIDLNENPWDCTCD 569
Score = 73 (30.8 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 29/114 (25%), Positives = 45/114 (39%)
Query: 167 FSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHT 226
F L + + L NN + D+ + L + L LYL+EN ++ +++F L +L
Sbjct: 97 FLHLNNAVSINLGNNALQDIQTGAFNGL--KILKRLYLHENKLDVFRNDTF-LGLESLEY 153
Query: 227 LALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGN 280
L L L +PT L K +L +LDL GN
Sbjct: 154 LQADYNVIKRIESGAFRNLSKLRVLILNDNLIPVLPTN-LFKAVSLTHLDLRGN 206
Score = 56 (24.8 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 25/93 (26%), Positives = 42/93 (45%)
Query: 351 FSNIDSVAFKSLFSLKL-VKINLIPNLDSIDQRAFVDNIQLETVIINENMNLKQLPSKLF 409
F+NI + + L + KL + NLI + D F + L+ + + N + + F
Sbjct: 397 FNNISELLPRPLNAKKLYLSSNLIQKIYRSD---FWNFSSLDLLHLGNN-RISYVQDGAF 452
Query: 410 QGNTNLKSVSLKGNSLSHLEASHFP-LERISFL 441
NLKS+ L GN + L F L+ + +L
Sbjct: 453 INLPNLKSLFLNGNDIEKLTPGMFRGLQSLHYL 485
Score = 46 (21.3 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 52 EVQTIILRENRISNVHYTLSFYIELRSLDLSVNKINVL 89
+++ +IL +N I + L + L LDL N++ VL
Sbjct: 174 KLRVLILNDNLIPVLPTNLFKAVSLTHLDLRGNRLKVL 211
>UNIPROTKB|E2RGP5 [details] [associations]
symbol:SLITRK3 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0007409 "axonogenesis" evidence=IEA]
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0007409 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00680000099775 CTD:22865 OMA:IAPYQTR
EMBL:AAEX03017345 RefSeq:XP_851171.1 Ensembl:ENSCAFT00000022943
GeneID:608925 KEGG:cfa:608925 NextBio:20894548 Uniprot:E2RGP5
Length = 979
Score = 146 (56.5 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 64/211 (30%), Positives = 96/211 (45%)
Query: 21 ICPSRCQCF----DQKLEASCTDAGL----EVVPIQLNPEVQTIILRENRISNVHYTLSF 72
ICP+ C C D L +C + G E++P LN + + L N I + Y F
Sbjct: 372 ICPTGCTCNLHINDLGLTVNCKERGFNNISELLPRPLN--AKKLYLSSNLIQKI-YRSDF 428
Query: 73 YIELRSLDL---SVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDL 129
+ SLDL N+I+ + F L +L ++ N+I L+ F+GL+ L L
Sbjct: 429 W-NFSSLDLLHLGNNRISYVQDGAFINLPNLKSLFLNGNDIEKLTPGMFRGLQSLHYLYF 487
Query: 130 SYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNN 189
+N I I AF +L+LL L+ NN+ ++ F+ SL L L N L +P
Sbjct: 488 EFNVIREIQPAAFSLMPNLKLLFLN-NNLLRTLPTDAFAGT-SLARLNLRKNYFLYLP-- 543
Query: 190 VLSNLPH-QSLHYLYLNENLIETVLDNSFPF 219
V L H ++ + LNEN + D PF
Sbjct: 544 VAGVLEHLNAIVQIDLNENPWDCTCD-LVPF 573
Score = 145 (56.1 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 43/149 (28%), Positives = 71/149 (47%)
Query: 64 SNVHYTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKE 123
+N+ F+ L L N + L +++F + N +++N+ N + + F GLK
Sbjct: 67 TNISQITEFWSRPFKLYLQRNSMRKLYTNSFLHLNNAVSINLGNNALQDIQSGAFNGLKI 126
Query: 124 LKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQI 183
LK L L NK+ + F LE L +N I E S F +L LR+L L++N I
Sbjct: 127 LKRLYLHENKLDIFRNDTFLGLESLEYLQADYNVIKRIE-SGAFRNLSKLRVLILNDNLI 185
Query: 184 LDVPNNVLSNLPHQSLHYLYLNENLIETV 212
+P N+ + SL +L L N ++ +
Sbjct: 186 PMLPTNLFKAV---SLTHLDLRGNRLKVL 211
Score = 125 (49.1 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 51/169 (30%), Positives = 74/169 (43%)
Query: 125 KTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQIL 184
K L LS N I I ++ F + L+LL L N I+Y +D F +L +L+ L L+ N I
Sbjct: 411 KKLYLSSNLIQKIYRSDFWNFSSLDLLHLGNNRISYVQDGA-FINLPNLKSLFLNGNDIE 469
Query: 185 DVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVT 244
+ + L QSLHYLY N+I + +F + NL L L
Sbjct: 470 KLTPGMFRGL--QSLHYLYFEFNVIREIQPAAFSL-MPNLKLLFLNNNLLRTLPTDAFAG 526
Query: 245 LRTLHXXXXXXXXXXAIPTKQ-LSKLSALVNLDLSGNNFS-NIDSVAFK 291
+L +P L L+A+V +DL+ N + D V FK
Sbjct: 527 T-SLARLNLRKNYFLYLPVAGVLEHLNAIVQIDLNENPWDCTCDLVPFK 574
Score = 115 (45.5 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 38/131 (29%), Positives = 61/131 (46%)
Query: 95 EYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILS 154
E+ ++ L + N + L ++F L +++L N + I AF L+ L L
Sbjct: 74 EFWSRPFKLYLQRNSMRKLYTNSFLHLNNAVSINLGNNALQDIQSGAFNGLKILKRLYLH 133
Query: 155 FNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLD 214
N + F + + F L+SL L+ D N I + + NL L L LN+NLI +
Sbjct: 134 ENKLDIFRN-DTFLGLESLEYLQADYNVIKRIESGAFRNL--SKLRVLILNDNLIPMLPT 190
Query: 215 NSFP-FTLTNL 224
N F +LT+L
Sbjct: 191 NLFKAVSLTHL 201
Score = 98 (39.6 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 34/114 (29%), Positives = 57/114 (50%)
Query: 344 LDLSGNNFSNIDSVAFKSLFSLKLV--KINLIPNLDSIDQRAFVDNIQLETVIINENMNL 401
L L+GN+ + F+ L SL + + N+I I AF L+ + +N N+ L
Sbjct: 461 LFLNGNDIEKLTPGMFRGLQSLHYLYFEFNVIRE---IQPAAFSLMPNLKLLFLNNNL-L 516
Query: 402 KQLPSKLFQGNTNLKSVSLKGNSLSHLEASHF--PLERISFLDLSDNPLHCDCN 453
+ LP+ F G T+L ++L+ N +L + L I +DL++NP C C+
Sbjct: 517 RTLPTDAFAG-TSLARLNLRKNYFLYLPVAGVLEHLNAIVQIDLNENPWDCTCD 569
Score = 72 (30.4 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 29/114 (25%), Positives = 46/114 (40%)
Query: 167 FSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHT 226
F L + + L NN + D+ + + L + L LYL+EN ++ +++F L +L
Sbjct: 97 FLHLNNAVSINLGNNALQDIQSGAFNGL--KILKRLYLHENKLDIFRNDTF-LGLESLEY 153
Query: 227 LALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGN 280
L L L +PT L K +L +LDL GN
Sbjct: 154 LQADYNVIKRIESGAFRNLSKLRVLILNDNLIPMLPTN-LFKAVSLTHLDLRGN 206
Score = 56 (24.8 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 25/93 (26%), Positives = 42/93 (45%)
Query: 351 FSNIDSVAFKSLFSLKL-VKINLIPNLDSIDQRAFVDNIQLETVIINENMNLKQLPSKLF 409
F+NI + + L + KL + NLI + D F + L+ + + N + + F
Sbjct: 397 FNNISELLPRPLNAKKLYLSSNLIQKIYRSD---FWNFSSLDLLHLGNN-RISYVQDGAF 452
Query: 410 QGNTNLKSVSLKGNSLSHLEASHFP-LERISFL 441
NLKS+ L GN + L F L+ + +L
Sbjct: 453 INLPNLKSLFLNGNDIEKLTPGMFRGLQSLHYL 485
Score = 47 (21.6 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 52 EVQTIILRENRISNVHYTLSFYIELRSLDLSVNKINVL 89
+++ +IL +N I + L + L LDL N++ VL
Sbjct: 174 KLRVLILNDNLIPMLPTNLFKAVSLTHLDLRGNRLKVL 211
>UNIPROTKB|F1SH46 [details] [associations]
symbol:SLITRK3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007409 "axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007409 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00680000099775 OMA:IAPYQTR
EMBL:CU466936 Ensembl:ENSSSCT00000012847 Uniprot:F1SH46
Length = 979
Score = 146 (56.5 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 64/211 (30%), Positives = 96/211 (45%)
Query: 21 ICPSRCQCF----DQKLEASCTDAGL----EVVPIQLNPEVQTIILRENRISNVHYTLSF 72
ICP+ C C D L +C + G E++P LN + + L N I + Y F
Sbjct: 373 ICPTGCTCNLHINDLGLTVNCKERGFNNISELLPRPLN--AKKLYLSSNLIQKI-YRSDF 429
Query: 73 YIELRSLDL---SVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDL 129
+ SLDL N+I+ + F L +L ++ N+I L+ F+GL+ L L
Sbjct: 430 W-NFSSLDLLHLGNNRISYVQDGAFINLPNLKSLFLNGNDIEKLTPGMFRGLQSLHYLYF 488
Query: 130 SYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNN 189
+N I I AF +L+LL L+ NN+ ++ F+ SL L L N L +P
Sbjct: 489 EFNVIREIQPAAFSLMPNLKLLFLN-NNLLRTLPTDAFAGT-SLARLNLRKNYFLYLP-- 544
Query: 190 VLSNLPH-QSLHYLYLNENLIETVLDNSFPF 219
V L H ++ + LNEN + D PF
Sbjct: 545 VAGVLEHLNAIVQIDLNENPWDCTCD-LVPF 574
Score = 145 (56.1 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 44/149 (29%), Positives = 71/149 (47%)
Query: 64 SNVHYTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKE 123
+N+ F+ L L N + L +++F + N +++N+ N + + F GLK
Sbjct: 68 TNISQITEFWSRPFKLYLQRNSMRKLYTNSFLHLNNAVSINLGNNALQDIQTGAFNGLKI 127
Query: 124 LKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQI 183
LK L L NK+ V F LE L +N I E S F +L LR+L L++N I
Sbjct: 128 LKRLYLHENKLDVFRNETFLGLESLEYLQADYNVIKRIE-SGAFRNLSKLRVLILNDNLI 186
Query: 184 LDVPNNVLSNLPHQSLHYLYLNENLIETV 212
+P N+ + SL +L L N ++ +
Sbjct: 187 PMLPTNLFKAV---SLTHLDLRGNRLKVL 212
Score = 125 (49.1 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 51/169 (30%), Positives = 74/169 (43%)
Query: 125 KTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQIL 184
K L LS N I I ++ F + L+LL L N I+Y +D F +L +L+ L L+ N I
Sbjct: 412 KKLYLSSNLIQKIYRSDFWNFSSLDLLHLGNNRISYVQDGA-FINLPNLKSLFLNGNDIE 470
Query: 185 DVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVT 244
+ + L QSLHYLY N+I + +F + NL L L
Sbjct: 471 KLTPGMFRGL--QSLHYLYFEFNVIREIQPAAFSL-MPNLKLLFLNNNLLRTLPTDAFAG 527
Query: 245 LRTLHXXXXXXXXXXAIPTKQ-LSKLSALVNLDLSGNNFS-NIDSVAFK 291
+L +P L L+A+V +DL+ N + D V FK
Sbjct: 528 T-SLARLNLRKNYFLYLPVAGVLEHLNAIVQIDLNENPWDCTCDLVPFK 575
Score = 117 (46.2 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 39/131 (29%), Positives = 61/131 (46%)
Query: 95 EYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILS 154
E+ ++ L + N + L ++F L +++L N + I AF L+ L L
Sbjct: 75 EFWSRPFKLYLQRNSMRKLYTNSFLHLNNAVSINLGNNALQDIQTGAFNGLKILKRLYLH 134
Query: 155 FNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLD 214
N + F + E F L+SL L+ D N I + + NL L L LN+NLI +
Sbjct: 135 ENKLDVFRN-ETFLGLESLEYLQADYNVIKRIESGAFRNL--SKLRVLILNDNLIPMLPT 191
Query: 215 NSFP-FTLTNL 224
N F +LT+L
Sbjct: 192 NLFKAVSLTHL 202
Score = 98 (39.6 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 34/114 (29%), Positives = 57/114 (50%)
Query: 344 LDLSGNNFSNIDSVAFKSLFSLKLV--KINLIPNLDSIDQRAFVDNIQLETVIINENMNL 401
L L+GN+ + F+ L SL + + N+I I AF L+ + +N N+ L
Sbjct: 462 LFLNGNDIEKLTPGMFRGLQSLHYLYFEFNVIRE---IQPAAFSLMPNLKLLFLNNNL-L 517
Query: 402 KQLPSKLFQGNTNLKSVSLKGNSLSHLEASHF--PLERISFLDLSDNPLHCDCN 453
+ LP+ F G T+L ++L+ N +L + L I +DL++NP C C+
Sbjct: 518 RTLPTDAFAG-TSLARLNLRKNYFLYLPVAGVLEHLNAIVQIDLNENPWDCTCD 570
Score = 56 (24.8 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 25/93 (26%), Positives = 42/93 (45%)
Query: 351 FSNIDSVAFKSLFSLKL-VKINLIPNLDSIDQRAFVDNIQLETVIINENMNLKQLPSKLF 409
F+NI + + L + KL + NLI + D F + L+ + + N + + F
Sbjct: 398 FNNISELLPRPLNAKKLYLSSNLIQKIYRSD---FWNFSSLDLLHLGNN-RISYVQDGAF 453
Query: 410 QGNTNLKSVSLKGNSLSHLEASHFP-LERISFL 441
NLKS+ L GN + L F L+ + +L
Sbjct: 454 INLPNLKSLFLNGNDIEKLTPGMFRGLQSLHYL 486
Score = 47 (21.6 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 52 EVQTIILRENRISNVHYTLSFYIELRSLDLSVNKINVL 89
+++ +IL +N I + L + L LDL N++ VL
Sbjct: 175 KLRVLILNDNLIPMLPTNLFKAVSLTHLDLRGNRLKVL 212
>ZFIN|ZDB-GENE-080327-15 [details] [associations]
symbol:lrrtm4l1 "leucine rich repeat transmembrane
neuronal 4 like 1" species:7955 "Danio rerio" [GO:0005515 "protein
binding" evidence=IPI] [GO:0042802 "identical protein binding"
evidence=IDA] InterPro:IPR001611 PROSITE:PS51450
ZFIN:ZDB-GENE-080327-15 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0042802 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00700000104056 EMBL:BX005125
EMBL:BX293550 IPI:IPI00876741 Ensembl:ENSDART00000113737
Bgee:F1QVN0 Uniprot:F1QVN0
Length = 571
Score = 189 (71.6 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 69/274 (25%), Positives = 122/274 (44%)
Query: 40 AGLEVVPIQLNPEVQTIILRENRISNVHYTLSFYIELRSLDLSVNKINVLGSHNFEYQNK 99
+G + P + E + + + +V +S + + L L N ++ + + F + N+
Sbjct: 26 SGERMCPYSCHCEGKIVHCESSAFQDVPENIS--VSCQGLSLRYNDLHTMLPYQFAHLNQ 83
Query: 100 LLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNIT 159
LL L + +N+I + F+G++ LK L LS N+IS ++ F +L L LS+N +
Sbjct: 84 LLWLYLDHNQIMFVDSRAFQGVRRLKELILSSNRISQLHNVTFHGVPNLRSLDLSYNKLQ 143
Query: 160 YFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPF 219
+ + F L+ L+ L L +N + +P V + L +SL +L L N + + +F
Sbjct: 144 ELQPGQ-FYGLRKLQNLHLRSNGLTAIP--VRAFLECRSLEFLDLGYNRLRVLTRTAF-L 199
Query: 220 TLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSG 279
L+ L L L L L A+ L LD+SG
Sbjct: 200 GLSRLMELHLEHNQFSRINFFLFPRLANLRALYLQWNRIRAVNQGLPWSWYTLQRLDISG 259
Query: 280 NNFSNIDSVAFKSLFSLKLVKINLIPN-LDSIDQ 312
N +D V F+ L +L++ +NL N L ++ Q
Sbjct: 260 NEIQVLDPVVFQCLPNLQV--LNLESNKLANVSQ 291
Score = 186 (70.5 bits), Expect = 4.0e-11, P = 4.0e-11
Identities = 74/291 (25%), Positives = 113/291 (38%)
Query: 12 LALTKLNKAICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNV-HYTL 70
L L + +CP C C + K+ C + + VP ++ Q + LR N + + Y
Sbjct: 21 LLLFSSGERMCPYSCHC-EGKI-VHCESSAFQDVPENISVSCQGLSLRYNDLHTMLPYQF 78
Query: 71 SFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLS 130
+ +L L L N+I + S F+ +L L +S N IS L TF G+ L++LDLS
Sbjct: 79 AHLNQLLWLYLDHNQIMFVDSRAFQGVRRLKELILSSNRISQLHNVTFHGVPNLRSLDLS 138
Query: 131 YNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNV 190
YNK+ + F L+ L L N +T F +SL L L N++ +
Sbjct: 139 YNKLQELQPGQFYGLRKLQNLHLRSNGLTAIP-VRAFLECRSLEFLDLGYNRLRVLTRTA 197
Query: 191 LSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHX 250
L L L+L N + FP L NL L L + TL
Sbjct: 198 FLGLSR--LMELHLEHNQFSRINFFLFP-RLANLRALYLQWNRIRAVNQGLPWSWYTLQR 254
Query: 251 XXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKI 301
+ L L L+L N +N+ + SL + +
Sbjct: 255 LDISGNEIQVLDPVVFQCLPNLQVLNLESNKLANVSQEVVAAWISLTTISL 305
>RGD|1308146 [details] [associations]
symbol:Shoc2 "soc-2 (suppressor of clear) homolog (C. elegans)"
species:10116 "Rattus norvegicus" [GO:0000164 "protein phosphatase
type 1 complex" evidence=IEA;ISO;ISS] [GO:0005634 "nucleus"
evidence=IEA;ISO;ISS] [GO:0005737 "cytoplasm" evidence=ISO;ISS]
[GO:0019903 "protein phosphatase binding" evidence=IEA;ISO;ISS]
[GO:0046579 "positive regulation of Ras protein signal
transduction" evidence=IEA;ISO;ISS] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR027036 PROSITE:PS51450 RGD:1308146 GO:GO:0005634
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875
Pfam:PF12799 GO:GO:0046579 GO:GO:0019903 GO:GO:0000164 HSSP:P07359
HOGENOM:HOG000116557 CTD:8036 HOVERGEN:HBG055661 OrthoDB:EOG408N7W
PANTHER:PTHR23155:SF38 EMBL:BC079032 IPI:IPI00464721
RefSeq:NP_001013173.1 UniGene:Rn.156055 ProteinModelPortal:Q6AYI5
PRIDE:Q6AYI5 GeneID:309548 KEGG:rno:309548 UCSC:RGD:1308146
InParanoid:Q6AYI5 NextBio:660958 ArrayExpress:Q6AYI5
Genevestigator:Q6AYI5 Uniprot:Q6AYI5
Length = 582
Score = 189 (71.6 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 112/447 (25%), Positives = 191/447 (42%)
Query: 12 LALTKLNKAICPSRCQCFDQKLEASCTDAGLEVVPIQLN--PEVQTIILRENRISNVHYT 69
L L+K + I P + Q E L+ +P ++ + T+ L EN ++++ +
Sbjct: 105 LDLSKRSIHILPPSVKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDS 164
Query: 70 LSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDL 129
L +LR LDL NK+ + S + + L L + +N I+A+ KD + L L TL +
Sbjct: 165 LDNLKKLRMLDLRHNKLREIPSVVYRLDS-LTTLYLRFNRITAVEKDV-RNLPRLSTLSI 222
Query: 130 SYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNN 189
NKI + + +L L ++ N + + EI + + L L +N++LD+P+
Sbjct: 223 RENKIKQL-PAEIGELCNLITLDVAHNQLEHLP-KEI-GNCTQITNLDLQHNELLDLPDT 279
Query: 190 VLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLH 249
+ NL SL+ L L N + + S + L L L +L L+
Sbjct: 280 I-GNL--SSLNRLGLRYNRLSAI-PRSLA-KCSALEELNLENNNISTLPESLLSSLVKLN 334
Query: 250 XXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSL-KL-VKINLIPNL 307
P S+ S + +L++ N + I F L KL +K N + +L
Sbjct: 335 SLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSL 394
Query: 308 DSIDQXXXXXXXXXXXXXXXXXAFSLTPLGTLKCDRLDLSGNNFSNIDSVAFKSLFSL-K 366
+D G + + L LS N + L +L K
Sbjct: 395 P-LDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPH----GLGNLRK 449
Query: 367 LVKINLIPN-LDSI-DQRAFVDNIQLETVIINENMNLKQLPSKLFQGN-TNLKSVSLKGN 423
L +++L N L+S+ ++ A++ ++Q + V+ N L LP + G+ TNL + L N
Sbjct: 450 LRELDLEENKLESLPNEIAYLKDLQ-KLVLTNNQ--LTTLPRGI--GHLTNLTHLGLGEN 504
Query: 424 SLSHLEASHFPLERISFLDLSDNP-LH 449
L+HL LE + L L+DNP LH
Sbjct: 505 LLTHLPEEIGTLENLEELYLNDNPNLH 531
Score = 147 (56.8 bits), Expect = 7.7e-07, P = 7.7e-07
Identities = 86/379 (22%), Positives = 163/379 (43%)
Query: 55 TIILRENRISNVHYTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALS 114
T+ LR NRI+ V + L +L + NKI L + E N L+ L++++N++ L
Sbjct: 196 TLYLRFNRITAVEKDVRNLPRLSTLSIRENKIKQLPAEIGELCN-LITLDVAHNQLEHLP 254
Query: 115 KDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLR 174
K+ ++ LDL +N++ + T + L L L +N ++ S + +L
Sbjct: 255 KE-IGNCTQITNLDLQHNELLDLPDT-IGNLSSLNRLGLRYNRLSAIPRS--LAKCSALE 310
Query: 175 ILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXX 234
L L+NN I +P ++LS+L L+ L L N + + P + +++L +
Sbjct: 311 ELNLENNNISTLPESLLSSLV--KLNSLTLARNCFQ-LYPVGGPSQFSTIYSLNMEHNRI 367
Query: 235 XXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLF 294
+ L ++P +++V L+L+ N + I L
Sbjct: 368 NKIPFGIFSRAKVLSKLNMKDNQLTSLPL-DFGTWTSMVELNLATNQLTKIPEDV-SGLV 425
Query: 295 SLKLVKI--NLIPNLD-SIDQXXXXXXXXXXXXXXXXXAFSLTPLGTLKCDRLDLSGNNF 351
SL+++ + NL+ L + + L L+ +L L+ N
Sbjct: 426 SLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQ--KLVLTNNQL 483
Query: 352 SNID-SVA-FKSLFSLKLVKINLIPNLDSIDQRAFVDNIQLETVIINENMNLKQLPSKLF 409
+ + + +L L L + NL+ +L ++ ++N LE + +N+N NL LP +L
Sbjct: 484 TTLPRGIGHLTNLTHLGLGE-NLLTHLP--EEIGTLEN--LEELYLNDNPNLHSLPFELA 538
Query: 410 QGNTNLKSVSLKGNSLSHL 428
+ L +S++ LSHL
Sbjct: 539 LCS-KLSIMSIENCPLSHL 556
>RGD|1560339 [details] [associations]
symbol:Lgr6 "leucine-rich repeat-containing G protein-coupled
receptor 6" species:10116 "Rattus norvegicus" [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016500 "protein-hormone receptor
activity" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000276 InterPro:IPR002131 Pfam:PF00001 PRINTS:PR00237
PRINTS:PR00373 PROSITE:PS51450 RGD:1560339 GO:GO:0016021
InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0016500 GeneTree:ENSGT00650000092962 CTD:59352
KO:K08399 OrthoDB:EOG4SQWW8 OMA:AYGKAPS IPI:IPI00213568
RefSeq:XP_001062538.1 RefSeq:XP_573455.1 ProteinModelPortal:D3ZJU9
Ensembl:ENSRNOT00000006969 GeneID:498233 KEGG:rno:498233
UCSC:RGD:1560339 NextBio:699115 Uniprot:D3ZJU9
Length = 965
Score = 193 (73.0 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 75/284 (26%), Positives = 120/284 (42%)
Query: 22 CPSRCQCFDQ--KLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSFYIE-LRS 78
CP+ C C + L A C++ GL VP L+P + L N ++ + L ++ L
Sbjct: 35 CPAPCHCQEDGIMLSADCSELGLSEVPADLDPLTAYLDLSMNNLTELQPGLFHHLRFLEE 94
Query: 79 LDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVIN 138
L LS N ++ + F + L L + N++ + + L L++L L N IS++
Sbjct: 95 LRLSGNHLSHIPRQAFSGLHSLKILMLQSNQLRGIPAEALWELPSLQSLRLDANLISLVP 154
Query: 139 KTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQS 198
+ +F L L L N +T + ++L +L+ + L N+I +P+ NL S
Sbjct: 155 ERSFEGLSSLRHLWLDDNALTEIPVRAL-NNLPALQAMTLALNRIRHIPDYAFQNLT--S 211
Query: 199 LHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXX 258
L L+L+ N I+ V +SF L NL TL L TL L
Sbjct: 212 LVVLHLHNNRIQHVGTHSFE-GLHNLETLDLNYNELQEFPVAIR-TLGRLQELGFHNNNI 269
Query: 259 XAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKIN 302
AIP K L + N + AF+ L L + +N
Sbjct: 270 KAIPEKAFMGNPLLQTIHFYDNPIQFVGRSAFQYLSKLHTLSLN 313
Score = 172 (65.6 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 76/326 (23%), Positives = 131/326 (40%)
Query: 127 LDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDV 186
LDLS N ++ + F LE L LS N++++ + FS L SL+IL L +NQ+ +
Sbjct: 71 LDLSMNNLTELQPGLFHHLRFLEELRLSGNHLSHIP-RQAFSGLHSLKILMLQSNQLRGI 129
Query: 187 PNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLR 246
P L LP SL L L+ NLI V + SF L++L L L L
Sbjct: 130 PAEALWELP--SLQSLRLDANLISLVPERSFE-GLSSLRHLWLDDNALTEIPVRALNNLP 186
Query: 247 TLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINL--- 303
L IP L++LV L L N ++ + +F+ L +L+ + +N
Sbjct: 187 ALQAMTLALNRIRHIPDYAFQNLTSLVVLHLHNNRIQHVGTHSFEGLHNLETLDLNYNEL 246
Query: 304 --IP-NLDSIDQXXXXXXXXXXXXXXXXXAFSLTPLGTLKCDRLDLSGNNFSNIDSVAFK 360
P + ++ + AF PL + N + AF+
Sbjct: 247 QEFPVAIRTLGRLQELGFHNNNIKAIPEKAFMGNPL----LQTIHFYDNPIQFVGRSAFQ 302
Query: 361 SLFSLKLVKINLIPNLDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSL 420
L L + +N ++ ++++ T+ ++ LP+ + Q L+ + L
Sbjct: 303 YLSKLHTLSLNGATDIQEFPDLKGTTSLEILTLT---RAGIRLLPAGMCQQLPRLRILEL 359
Query: 421 KGNSLSHLEASHFPLERISFLDLSDN 446
N + L + H +++ + L N
Sbjct: 360 SHNQIEELPSLH-RCQKLEEIGLQHN 384
Score = 138 (53.6 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 78/326 (23%), Positives = 126/326 (38%)
Query: 51 PEVQTIILRENRISNV-HYTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNE 109
P +Q++ L N IS V + LR L L N + + L + ++ N
Sbjct: 138 PSLQSLRLDANLISLVPERSFEGLSSLRHLWLDDNALTEIPVRALNNLPALQAMTLALNR 197
Query: 110 ISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSS 169
I + F+ L L L L N+I + +F +LE L L++N + F + +
Sbjct: 198 IRHIPDYAFQNLTSLVVLHLHNNRIQHVGTHSFEGLHNLETLDLNYNELQEFPVA--IRT 255
Query: 170 LKSLRILKLDNNQILDVPNNVLSNLPH-QSLHYLYLNENLIETVLDNSFPFTLTNLHTLA 228
L L+ L NN I +P P Q++H+ Y +N I+ V ++F + L+ LHTL+
Sbjct: 256 LGRLQELGFHNNNIKAIPEKAFMGNPLLQTIHF-Y--DNPIQFVGRSAFQY-LSKLHTLS 311
Query: 229 LXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSV 288
L T +L +P +L L L+LS N + S+
Sbjct: 312 LNGATDIQEFPDLKGTT-SLEILTLTRAGIRLLPAGMCQQLPRLRILELSHNQIEELPSL 370
Query: 289 -AFKSLFSLKLVKINLIPNLDSIDQXXXXXXXXXXXXXXXXXAFSLTPLGTLKC-DRLDL 346
+ L + L + N I + + A TL+ +LDL
Sbjct: 371 HRCQKLEEIGL-QHNRIWEIGADTFSQLSSLQALDLSWNAIRAIHPEAFSTLRSLVKLDL 429
Query: 347 SGNNFSNIDSVAFKSLFSLKLVKINL 372
+ N + + L LKL K NL
Sbjct: 430 TDNQLTTLPLAGLGGLMHLKL-KGNL 454
Score = 47 (21.6 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 18/46 (39%), Positives = 25/46 (54%)
Query: 330 AFSLTPLGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPN 375
A + + L +L+ LDLS N I AF +L SL VK++L N
Sbjct: 391 ADTFSQLSSLQA--LDLSWNAIRAIHPEAFSTLRSL--VKLDLTDN 432
>FB|FBgn0034540 [details] [associations]
symbol:Lrt "Leucine-rich tendon-specific protein"
species:7227 "Drosophila melanogaster" [GO:0016021 "integral to
membrane" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:2001282 "negative regulation of muscle cell chemotaxis toward
tendon cell" evidence=IMP] [GO:0005927 "muscle tendon junction"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0043234 "protein complex" evidence=IPI] [GO:2001283 "Roundabout
signaling pathway involved in muscle cell chemotaxis toward tendon
cell" evidence=IGI] InterPro:IPR001611 PROSITE:PS51450
EMBL:AE013599 GO:GO:0016021 GO:GO:0005886 GO:GO:0043234
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005927 GeneTree:ENSGT00690000101816 RefSeq:NP_611506.2
UniGene:Dm.22099 ProteinModelPortal:A1ZBX8 SMR:A1ZBX8
EnsemblMetazoa:FBtr0302284 GeneID:37342 KEGG:dme:Dmel_CG11136
UCSC:CG11136-RA CTD:37342 FlyBase:FBgn0034540 eggNOG:NOG299525
InParanoid:A1ZBX8 OMA:PIHCESK OrthoDB:EOG48KPT1 GenomeRNAi:37342
NextBio:803193 Bgee:A1ZBX8 GO:GO:2001282 GO:GO:2001283
Uniprot:A1ZBX8
Length = 808
Score = 191 (72.3 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 66/234 (28%), Positives = 108/234 (46%)
Query: 53 VQTIILRENRISNVHYT-LSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEIS 111
+Q + L N + +V + LS L LDL+ NKI LG+ +F L+ L +S N+IS
Sbjct: 203 LQALGLPGNALMSVPWNALSTLSALERLDLANNKIKALGTADFVGLTSLVYLELSNNQIS 262
Query: 112 ALSKDTFKGLKELKTLDLSYNKISVINKT--AFRDTLHLELLILSFNNITYFEDSEIFSS 169
++S+ TF L++L+ L L N++ ++ + L L L L NN+ +
Sbjct: 263 SISQRTFVNLRKLEVLKLGGNRLGDYAQSLRSLSQCLSLRQLDLQANNLNGPLSEQTLPG 322
Query: 170 LKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLAL 229
+++L L L+ N I + N L+N L L L N I+ + D++F F L L +L L
Sbjct: 323 MRNLESLNLNRNLIKSIQNKALANFSR--LVSLSLRHNQIDVLQDHAF-FGLGALDSLDL 379
Query: 230 XXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFS 283
L L A+ + ++ L +L L L+GN+ S
Sbjct: 380 SYNGIVAISSASLQHLSRLTVLDLTHNFLRALTSDLIAPLPSLRELRLAGNDIS 433
Score = 123 (48.4 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 87/357 (24%), Positives = 137/357 (38%)
Query: 87 NVLGSHNFEYQ-----NKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTA 141
N+ G+ N E + L NI + + L+ + LD S ++ ++
Sbjct: 112 NITGTRNAELECGCDLPHTLRCNIDLHGMMLLADRLRTSPYSISLLDCSLRNVTFLSDAK 171
Query: 142 FRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHY 201
D + L L++S I S L+ L L N ++ VP N LS L +L
Sbjct: 172 IFDNVSLHGLVISSGEIKRVHKSAFLGIRGPLQALGLPGNALMSVPWNALSTL--SALER 229
Query: 202 LYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXX-- 259
L L N I+ + F LT+L L L V LR L
Sbjct: 230 LDLANNKIKALGTADF-VGLTSLVYLELSNNQISSISQRTFVNLRKLEVLKLGGNRLGDY 288
Query: 260 AIPTKQLSKLSALVNLDLSGNNFSNIDSV----AFKSLFSLKLVK--INLIPN--LDSID 311
A + LS+ +L LDL NN + S ++L SL L + I I N L +
Sbjct: 289 AQSLRSLSQCLSLRQLDLQANNLNGPLSEQTLPGMRNLESLNLNRNLIKSIQNKALANFS 348
Query: 312 QXXXXXXXXXXXXXXXXXAFSLTPLGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVKI- 370
+ AF LG L D LDLS N I S + + L L ++ +
Sbjct: 349 RLVSLSLRHNQIDVLQDHAFF--GLGAL--DSLDLSYNGIVAISSASLQHLSRLTVLDLT 404
Query: 371 -NLIPNLDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLS 426
N + L S D A + +++ E + ++++ + G L+S+ ++ N LS
Sbjct: 405 HNFLRALTS-DLIAPLPSLR-ELRLAGNDISI--VARNAMDGARELESLQMQENPLS 457
Score = 47 (21.6 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 7/27 (25%), Positives = 16/27 (59%)
Query: 514 CSSPPDIKGLEVKAVPENSVHCESNTM 540
C +PP ++G + VP ++ C+ + +
Sbjct: 482 CVTPPRLEGAPLLQVPVETLSCDMDNV 508
Score = 37 (18.1 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 5/16 (31%), Positives = 12/16 (75%)
Query: 436 ERISFLDLSDNPLHCD 451
E I+ + + ++P+HC+
Sbjct: 575 EHINEILIDNSPIHCE 590
>MGI|MGI:2442845 [details] [associations]
symbol:Lrrc38 "leucine rich repeat containing 38"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
MGI:MGI:2442845 GO:GO:0016021 GO:GO:0005886 eggNOG:COG4886
InterPro:IPR000483 SMART:SM00082 GO:GO:0005216 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 CTD:126755 HOGENOM:HOG000113369
HOVERGEN:HBG094920 OMA:LDEIQCS OrthoDB:EOG4GMTXN EMBL:AL611982
EMBL:BC129963 EMBL:AK045936 EMBL:AK160116 IPI:IPI00938501
RefSeq:NP_001156455.1 UniGene:Mm.94020 ProteinModelPortal:A2VDH3
SMR:A2VDH3 PRIDE:A2VDH3 Ensembl:ENSMUST00000052458 GeneID:242735
KEGG:mmu:242735 UCSC:uc008vqb.2 GeneTree:ENSGT00700000104451
InParanoid:A2VDH3 NextBio:385532 Bgee:A2VDH3 CleanEx:MM_LRRC38
Genevestigator:A2VDH3 Uniprot:A2VDH3
Length = 298
Score = 181 (68.8 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 50/172 (29%), Positives = 83/172 (48%)
Query: 11 ILALTKLNKAICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTL 70
+L L +A CP+ C C D C D GL VP +V+ +++ NRI +
Sbjct: 22 LLVLLGPGRA-CPAGCACTDPHT-VDCRDRGLPSVPDPFPLDVRKLLVAGNRIQQIPEDF 79
Query: 71 S-FYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDL 129
F+ +L LD N + L F KL L++SYN ++ L F+ L L L
Sbjct: 80 FIFHGDLVYLDFRNNSLRSLEEGTFSGSGKLAFLDLSYNNLTQLGAGAFRSAGRLVKLSL 139
Query: 130 SYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNN 181
+ N ++ +++ AF L++L L+ NN+ + + +L +LR ++LD N
Sbjct: 140 ANNHLAGVHEAAFESLESLQVLELNDNNLRSLNVAAL-DALPALRTVRLDGN 190
Score = 150 (57.9 bits), Expect = 9.0e-08, P = 9.0e-08
Identities = 38/124 (30%), Positives = 68/124 (54%)
Query: 72 FYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSY 131
F +++R L ++ N+I + F + L+ L+ N + +L + TF G +L LDLSY
Sbjct: 58 FPLDVRKLLVAGNRIQQIPEDFFIFHGDLVYLDFRNNSLRSLEEGTFSGSGKLAFLDLSY 117
Query: 132 NKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVL 191
N ++ + AFR L L L+ N++ ++ F SL+SL++L+L++N + + L
Sbjct: 118 NNLTQLGAGAFRSAGRLVKLSLANNHLAGVHEAA-FESLESLQVLELNDNNLRSLNVAAL 176
Query: 192 SNLP 195
LP
Sbjct: 177 DALP 180
>ZFIN|ZDB-GENE-110125-1 [details] [associations]
symbol:rxfp1 "relaxin/insulin-like family peptide
receptor 1" species:7955 "Danio rerio" [GO:0004930 "G-protein
coupled receptor activity" evidence=IEA] [GO:0007186 "G-protein
coupled receptor signaling pathway" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016500 "protein-hormone
receptor activity" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002172
InterPro:IPR008112 InterPro:IPR017452 Pfam:PF00001 Pfam:PF00057
PRINTS:PR00237 PRINTS:PR01739 PROSITE:PS50068 PROSITE:PS50262
PROSITE:PS51450 SMART:SM00192 ZFIN:ZDB-GENE-110125-1 GO:GO:0016021
GO:GO:0004930 InterPro:IPR003591 SMART:SM00369 Gene3D:4.10.400.10
InterPro:IPR023415 SUPFAM:SSF57424 PROSITE:PS01209
InterPro:IPR000372 SMART:SM00013 CTD:59350 KO:K04306 EMBL:HM135955
IPI:IPI00969701 RefSeq:NP_001177863.1 UniGene:Dr.159212
ProteinModelPortal:D9IDV5 GeneID:100498669 KEGG:dre:100498669
Uniprot:D9IDV5
Length = 748
Score = 190 (71.9 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 69/230 (30%), Positives = 104/230 (45%)
Query: 74 IELRSLDLSVNKINVLGSHNF-EYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYN 132
I + + L N + L + F +YQ+ L L + +N I ++ F+GL L L LSYN
Sbjct: 123 INVTMMSLQRNGLRKLNADMFLKYQS-LQKLYLQHNRIKSVHPQAFRGLYNLTRLYLSYN 181
Query: 133 KISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLS 192
+I+ + F+D LE LIL NN + S FS L+SL +L L NN + + +++
Sbjct: 182 RITTLLPDVFQDLHKLEWLILE-NNSLHHISSLTFSGLRSLVLLVLLNNALTKL-DDICL 239
Query: 193 NLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHT-LALXXXXXXXXXXXXXVTLRTLHXX 251
+P L++L + N +ETV + F N+ T L L LR L
Sbjct: 240 EMPR--LNWLDIEGNKMETV--GNVTFRSCNMLTVLVLQRNRISRIHAQAFSLLRKLGEL 295
Query: 252 XXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSLKLVKI 301
AIP L L+ L++S N N+ F L LK + I
Sbjct: 296 DLSSNRIEAIPPDLFVNLGDLLQLNISYNPIMNLRVDHFDKLHKLKSLSI 345
Score = 175 (66.7 bits), Expect = 9.8e-10, P = 9.8e-10
Identities = 73/275 (26%), Positives = 110/275 (40%)
Query: 23 PSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRISNVHYTLSF-YIELRSLDL 81
P+ CQC D LE C A + VP+ ++ V + L+ N + ++ + Y L+ L L
Sbjct: 98 PAECQCRD--LELDCDGAHFKDVPM-VSINVTMMSLQRNGLRKLNADMFLKYQSLQKLYL 154
Query: 82 SVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTA 141
N+I + F L L +SYN I+ L D F+ L +L+ L L N + I+
Sbjct: 155 QHNRIKSVHPQAFRGLYNLTRLYLSYNRITTLLPDVFQDLHKLEWLILENNSLHHISSLT 214
Query: 142 FRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHY 201
F L LL+L N +T +D I + L L ++ N++ V N + L
Sbjct: 215 FSGLRSLVLLVLLNNALTKLDD--ICLEMPRLNWLDIEGNKMETVGNVTFRSC--NMLTV 270
Query: 202 LYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAI 261
L L N I + +F L L L L V L L +
Sbjct: 271 LVLQRNRISRIHAQAFSL-LRKLGELDLSSNRIEAIPPDLFVNLGDLLQLNISYNPIMNL 329
Query: 262 PTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSL 296
KL L +L + G NI F+ L +L
Sbjct: 330 RVDHFDKLHKLKSLSIEGIEIGNIHRRMFEPLKNL 364
Score = 134 (52.2 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 59/214 (27%), Positives = 89/214 (41%)
Query: 103 LNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFE 162
+++ N + L+ D F + L+ L L +N+I ++ AFR +L L LS+N IT
Sbjct: 128 MSLQRNGLRKLNADMFLKYQSLQKLYLQHNRIKSVHPQAFRGLYNLTRLYLSYNRITTLL 187
Query: 163 DSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLT 222
++F L L L L+NN + + + S L +SL L L N + T LD+ +
Sbjct: 188 P-DVFQDLHKLEWLILENNSLHHISSLTFSGL--RSLVLLVLLNNAL-TKLDD-ICLEMP 242
Query: 223 NLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNF 282
L+ L + + L I + S L L LDLS N
Sbjct: 243 RLNWLDIEGNKMETVGNVTFRSCNMLTVLVLQRNRISRIHAQAFSLLRKLGELDLSSNRI 302
Query: 283 SNIDSVAFKSLFSLKLVKI--NLIPNL--DSIDQ 312
I F +L L + I N I NL D D+
Sbjct: 303 EAIPPDLFVNLGDLLQLNISYNPIMNLRVDHFDK 336
>MGI|MGI:2679447 [details] [associations]
symbol:Slitrk3 "SLIT and NTRK-like family, member 3"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0007409 "axonogenesis" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=ISS] MGI:MGI:2679447 GO:GO:0016021 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 EMBL:CH466547 HOGENOM:HOG000290667
HOVERGEN:HBG056407 GeneTree:ENSGT00680000099775 CTD:22865
eggNOG:NOG292495 OMA:IAPYQTR OrthoDB:EOG473PQR EMBL:AB097572
EMBL:AK158856 EMBL:BC066059 IPI:IPI00329845 RefSeq:NP_942564.2
UniGene:Mm.331076 ProteinModelPortal:Q810B9 SMR:Q810B9
PhosphoSite:Q810B9 PaxDb:Q810B9 PRIDE:Q810B9
Ensembl:ENSMUST00000059407 GeneID:386750 KEGG:mmu:386750
InParanoid:Q6NZM5 NextBio:405558 Bgee:Q810B9 CleanEx:MM_SLITRK3
Genevestigator:Q810B9 GermOnline:ENSMUSG00000048304 Uniprot:Q810B9
Length = 980
Score = 146 (56.5 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 64/211 (30%), Positives = 96/211 (45%)
Query: 21 ICPSRCQCF----DQKLEASCTDAGL----EVVPIQLNPEVQTIILRENRISNVHYTLSF 72
ICP+ C C D L +C + G E++P LN + + L N I + Y F
Sbjct: 373 ICPTGCTCNLHINDLGLTVNCKERGFNNISELLPRPLN--AKKLYLSSNLIQKI-YRSDF 429
Query: 73 YIELRSLDL---SVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDL 129
+ SLDL N+I+ + F L +L ++ N+I L+ F+GL+ L L
Sbjct: 430 W-NFSSLDLLHLGNNRISYVQDGAFINLPNLKSLFLNGNDIEKLTPGMFRGLQSLHYLYF 488
Query: 130 SYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNN 189
+N I I AF +L+LL L+ NN+ ++ F+ SL L L N L +P
Sbjct: 489 EFNVIREIQPAAFSLMPNLKLLFLN-NNLLRTLPTDAFAGT-SLARLNLRKNYFLYLP-- 544
Query: 190 VLSNLPH-QSLHYLYLNENLIETVLDNSFPF 219
V L H ++ + LNEN + D PF
Sbjct: 545 VAGVLEHLNAIVQIDLNENPWDCTCD-LVPF 574
Score = 144 (55.7 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
Identities = 44/149 (29%), Positives = 71/149 (47%)
Query: 64 SNVHYTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKE 123
+N+ F+ L L N + L +++F + N +++N+ N + + F GLK
Sbjct: 68 TNISQITEFWSRPFKLYLQRNSMRRLYTNSFLHLNNAVSINLGNNALQDIQTGAFNGLKI 127
Query: 124 LKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQI 183
LK L L NK+ V F LE L +N I E S F +L LR+L L++N I
Sbjct: 128 LKRLYLHENKLDVFRNDTFLGLESLEYLQADYNVIKRIE-SGAFRNLSKLRVLILNDNLI 186
Query: 184 LDVPNNVLSNLPHQSLHYLYLNENLIETV 212
+P N+ + SL +L L N ++ +
Sbjct: 187 PVLPTNLFKAV---SLTHLDLRGNRLKVL 212
Score = 125 (49.1 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 51/169 (30%), Positives = 74/169 (43%)
Query: 125 KTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQIL 184
K L LS N I I ++ F + L+LL L N I+Y +D F +L +L+ L L+ N I
Sbjct: 412 KKLYLSSNLIQKIYRSDFWNFSSLDLLHLGNNRISYVQDGA-FINLPNLKSLFLNGNDIE 470
Query: 185 DVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVT 244
+ + L QSLHYLY N+I + +F + NL L L
Sbjct: 471 KLTPGMFRGL--QSLHYLYFEFNVIREIQPAAFSL-MPNLKLLFLNNNLLRTLPTDAFAG 527
Query: 245 LRTLHXXXXXXXXXXAIPTKQ-LSKLSALVNLDLSGNNFS-NIDSVAFK 291
+L +P L L+A+V +DL+ N + D V FK
Sbjct: 528 T-SLARLNLRKNYFLYLPVAGVLEHLNAIVQIDLNENPWDCTCDLVPFK 575
Score = 115 (45.5 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 38/131 (29%), Positives = 61/131 (46%)
Query: 95 EYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILS 154
E+ ++ L + N + L ++F L +++L N + I AF L+ L L
Sbjct: 75 EFWSRPFKLYLQRNSMRRLYTNSFLHLNNAVSINLGNNALQDIQTGAFNGLKILKRLYLH 134
Query: 155 FNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLD 214
N + F + + F L+SL L+ D N I + + NL L L LN+NLI +
Sbjct: 135 ENKLDVFRN-DTFLGLESLEYLQADYNVIKRIESGAFRNL--SKLRVLILNDNLIPVLPT 191
Query: 215 NSFP-FTLTNL 224
N F +LT+L
Sbjct: 192 NLFKAVSLTHL 202
Score = 98 (39.6 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
Identities = 34/114 (29%), Positives = 57/114 (50%)
Query: 344 LDLSGNNFSNIDSVAFKSLFSLKLV--KINLIPNLDSIDQRAFVDNIQLETVIINENMNL 401
L L+GN+ + F+ L SL + + N+I I AF L+ + +N N+ L
Sbjct: 462 LFLNGNDIEKLTPGMFRGLQSLHYLYFEFNVIRE---IQPAAFSLMPNLKLLFLNNNL-L 517
Query: 402 KQLPSKLFQGNTNLKSVSLKGNSLSHLEASHF--PLERISFLDLSDNPLHCDCN 453
+ LP+ F G T+L ++L+ N +L + L I +DL++NP C C+
Sbjct: 518 RTLPTDAFAG-TSLARLNLRKNYFLYLPVAGVLEHLNAIVQIDLNENPWDCTCD 570
Score = 73 (30.8 bits), Expect = 0.00073, Sum P(2) = 0.00072
Identities = 29/114 (25%), Positives = 45/114 (39%)
Query: 167 FSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHT 226
F L + + L NN + D+ + L + L LYL+EN ++ +++F L +L
Sbjct: 98 FLHLNNAVSINLGNNALQDIQTGAFNGL--KILKRLYLHENKLDVFRNDTF-LGLESLEY 154
Query: 227 LALXXXXXXXXXXXXXVTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGN 280
L L L +PT L K +L +LDL GN
Sbjct: 155 LQADYNVIKRIESGAFRNLSKLRVLILNDNLIPVLPTN-LFKAVSLTHLDLRGN 207
Score = 56 (24.8 bits), Expect = 5.0e-07, Sum P(2) = 5.0e-07
Identities = 25/93 (26%), Positives = 42/93 (45%)
Query: 351 FSNIDSVAFKSLFSLKL-VKINLIPNLDSIDQRAFVDNIQLETVIINENMNLKQLPSKLF 409
F+NI + + L + KL + NLI + D F + L+ + + N + + F
Sbjct: 398 FNNISELLPRPLNAKKLYLSSNLIQKIYRSD---FWNFSSLDLLHLGNN-RISYVQDGAF 453
Query: 410 QGNTNLKSVSLKGNSLSHLEASHFP-LERISFL 441
NLKS+ L GN + L F L+ + +L
Sbjct: 454 INLPNLKSLFLNGNDIEKLTPGMFRGLQSLHYL 486
Score = 46 (21.3 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 52 EVQTIILRENRISNVHYTLSFYIELRSLDLSVNKINVL 89
+++ +IL +N I + L + L LDL N++ VL
Sbjct: 175 KLRVLILNDNLIPVLPTNLFKAVSLTHLDLRGNRLKVL 212
>UNIPROTKB|F1N513 [details] [associations]
symbol:LOC527364 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0007409 "axonogenesis" evidence=IEA]
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0007409 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00680000099775 OMA:IAPYQTR EMBL:DAAA02002302
IPI:IPI00907843 RefSeq:XP_003585735.1 RefSeq:XP_003585736.1
Ensembl:ENSBTAT00000022827 GeneID:527364 KEGG:bta:527364
Uniprot:F1N513
Length = 980
Score = 146 (56.5 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 64/211 (30%), Positives = 96/211 (45%)
Query: 21 ICPSRCQCF----DQKLEASCTDAGL----EVVPIQLNPEVQTIILRENRISNVHYTLSF 72
ICP+ C C D L +C + G E++P LN + + L N I + Y F
Sbjct: 373 ICPTGCTCNLHINDLGLTVNCKERGFNNISELLPRPLN--AKKLYLSSNLIQKI-YRSDF 429
Query: 73 YIELRSLDL---SVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDL 129
+ SLDL N+I+ + F L +L ++ N+I L+ F+GL+ L L
Sbjct: 430 W-NFSSLDLLHLGNNRISYVQDGAFINLPNLKSLFLNGNDIEKLTPGMFRGLQSLHYLYF 488
Query: 130 SYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNN 189
+N I I AF +L+LL L+ NN+ ++ F+ SL L L N L +P
Sbjct: 489 EFNVIREIQPAAFSLMPNLKLLFLN-NNLLRTLPTDAFAGT-SLARLNLRKNYFLYLP-- 544
Query: 190 VLSNLPH-QSLHYLYLNENLIETVLDNSFPF 219
V L H ++ + LNEN + D PF
Sbjct: 545 VAGVLEHLNAIVQIDLNENPWDCTCD-LVPF 574
Score = 144 (55.7 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
Identities = 43/149 (28%), Positives = 71/149 (47%)
Query: 64 SNVHYTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKE 123
+N+ F+ L L N + L +++F + N +++N+ N + + F GLK
Sbjct: 68 TNISQITEFWSRPFKLYLQRNSMRKLYTNSFLHLNNAVSINLGNNALQDIQTGAFNGLKI 127
Query: 124 LKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQI 183
LK L L NK+ + F LE L +N I E S F +L LR+L L++N I
Sbjct: 128 LKRLYLHENKLDIFRNDTFLGLESLEYLQADYNVIKRIE-SGAFRNLSKLRVLILNDNLI 186
Query: 184 LDVPNNVLSNLPHQSLHYLYLNENLIETV 212
+P N+ + SL +L L N ++ +
Sbjct: 187 PMLPTNLFKAV---SLTHLDLRGNRLKVL 212
Score = 125 (49.1 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 51/169 (30%), Positives = 74/169 (43%)
Query: 125 KTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQIL 184
K L LS N I I ++ F + L+LL L N I+Y +D F +L +L+ L L+ N I
Sbjct: 412 KKLYLSSNLIQKIYRSDFWNFSSLDLLHLGNNRISYVQDGA-FINLPNLKSLFLNGNDIE 470
Query: 185 DVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVT 244
+ + L QSLHYLY N+I + +F + NL L L
Sbjct: 471 KLTPGMFRGL--QSLHYLYFEFNVIREIQPAAFSL-MPNLKLLFLNNNLLRTLPTDAFAG 527
Query: 245 LRTLHXXXXXXXXXXAIPTKQ-LSKLSALVNLDLSGNNFS-NIDSVAFK 291
+L +P L L+A+V +DL+ N + D V FK
Sbjct: 528 T-SLARLNLRKNYFLYLPVAGVLEHLNAIVQIDLNENPWDCTCDLVPFK 575
Score = 114 (45.2 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08
Identities = 38/131 (29%), Positives = 61/131 (46%)
Query: 95 EYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILS 154
E+ ++ L + N + L ++F L +++L N + I AF L+ L L
Sbjct: 75 EFWSRPFKLYLQRNSMRKLYTNSFLHLNNAVSINLGNNALQDIQTGAFNGLKILKRLYLH 134
Query: 155 FNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLD 214
N + F + + F L+SL L+ D N I + + NL L L LN+NLI +
Sbjct: 135 ENKLDIFRN-DTFLGLESLEYLQADYNVIKRIESGAFRNL--SKLRVLILNDNLIPMLPT 191
Query: 215 NSFP-FTLTNL 224
N F +LT+L
Sbjct: 192 NLFKAVSLTHL 202
Score = 98 (39.6 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
Identities = 34/114 (29%), Positives = 57/114 (50%)
Query: 344 LDLSGNNFSNIDSVAFKSLFSLKLV--KINLIPNLDSIDQRAFVDNIQLETVIINENMNL 401
L L+GN+ + F+ L SL + + N+I I AF L+ + +N N+ L
Sbjct: 462 LFLNGNDIEKLTPGMFRGLQSLHYLYFEFNVIRE---IQPAAFSLMPNLKLLFLNNNL-L 517
Query: 402 KQLPSKLFQGNTNLKSVSLKGNSLSHLEASHF--PLERISFLDLSDNPLHCDCN 453
+ LP+ F G T+L ++L+ N +L + L I +DL++NP C C+
Sbjct: 518 RTLPTDAFAG-TSLARLNLRKNYFLYLPVAGVLEHLNAIVQIDLNENPWDCTCD 570
Score = 56 (24.8 bits), Expect = 5.0e-07, Sum P(2) = 5.0e-07
Identities = 25/93 (26%), Positives = 42/93 (45%)
Query: 351 FSNIDSVAFKSLFSLKL-VKINLIPNLDSIDQRAFVDNIQLETVIINENMNLKQLPSKLF 409
F+NI + + L + KL + NLI + D F + L+ + + N + + F
Sbjct: 398 FNNISELLPRPLNAKKLYLSSNLIQKIYRSD---FWNFSSLDLLHLGNN-RISYVQDGAF 453
Query: 410 QGNTNLKSVSLKGNSLSHLEASHFP-LERISFL 441
NLKS+ L GN + L F L+ + +L
Sbjct: 454 INLPNLKSLFLNGNDIEKLTPGMFRGLQSLHYL 486
Score = 47 (21.6 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 52 EVQTIILRENRISNVHYTLSFYIELRSLDLSVNKINVL 89
+++ +IL +N I + L + L LDL N++ VL
Sbjct: 175 KLRVLILNDNLIPMLPTNLFKAVSLTHLDLRGNRLKVL 212
>ZFIN|ZDB-GENE-040219-7 [details] [associations]
symbol:tlr3 "toll-like receptor 3" species:7955
"Danio rerio" [GO:0032722 "positive regulation of chemokine
production" evidence=IEA] [GO:0043330 "response to exogenous dsRNA"
evidence=IEA] [GO:0050729 "positive regulation of inflammatory
response" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0034138 "toll-like receptor 3 signaling pathway"
evidence=IEA] [GO:0045087 "innate immune response" evidence=IEA]
[GO:0051607 "defense response to virus" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0001819 "positive
regulation of cytokine production" evidence=IEA] [GO:0002756
"MyD88-independent toll-like receptor signaling pathway"
evidence=IEA] [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0004888 "transmembrane signaling receptor
activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009615 "response to virus" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0009617 "response to bacterium"
evidence=IDA] InterPro:IPR000157 InterPro:IPR001611
InterPro:IPR027173 Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450
ZFIN:ZDB-GENE-040219-7 GO:GO:0016021 GO:GO:0007165 GO:GO:0009617
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005622 GO:GO:0009615 InterPro:IPR000372 SMART:SM00013
InterPro:IPR026906 Pfam:PF13306 SUPFAM:SSF52200 HOVERGEN:HBG023181
PANTHER:PTHR24365:SF5 EMBL:AY616582 IPI:IPI00510961
UniGene:Dr.82491 ProteinModelPortal:Q6IWL5 STRING:Q6IWL5
InParanoid:Q6IWL5 Uniprot:Q6IWL5
Length = 903
Score = 191 (72.3 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 99/373 (26%), Positives = 149/373 (39%)
Query: 100 LLNLNISYNEISALSKDTFKGLKELK--TLDLSYNKISVINKTAFRDTLHLELLILSFNN 157
L NL++ E LS TF+GL++ K LDLS N+IS I AF+ LE L L N
Sbjct: 251 LRNLSLKSTEQVTLSNTTFQGLEKTKITVLDLSENRISKIVDGAFQWLPQLEFLSLEHNT 310
Query: 158 ITYFEDSEIFSSLKSLRILKLDNNQILDVPN-NVLSNLPHQ---SLHYLYLNENLIETVL 213
I + + FS L +LR L L I + V+ + Q L YL + +
Sbjct: 311 IRHLTNDS-FSGLGNLRQLNLRKALIKSHASLPVIDDFSFQHLVQLEYLCMANTAFRELT 369
Query: 214 DNSFPFTLTNLHTLALXXXXXXXXXXX--XXVTLRTLHXXXXXXXXXXAIPTKQLSKLSA 271
+ F L NL TL L L+ I + S+
Sbjct: 370 EQIFS-GLRNLKTLDLSWSITGIKTVTNKTFAGLKESPLLQTLNLTGMGINKLEPGAFSS 428
Query: 272 LVNLD--LSGNNFSN--IDSVAFKSLFSLKLVKINLIPNLDSIDQXXXXXXXXXXXXXXX 327
NL L NF N + FK L ++K + +++ S+
Sbjct: 429 FGNLSNLLMSRNFINQQLQGNEFKGLSNIKEIDMSINQQSISLTNASFVHVSTLRILKLG 488
Query: 328 XXA-----FSLTPLGTL-KCDRLDLSGNNFSNIDSVAFKSLFSLKLVKI--NLIPNLDSI 379
+P L LDLS NN +NI+ + L++LK+VK+ N + L +
Sbjct: 489 RALKGTLDMEPSPFRPLVNLTILDLSNNNIANINGDLLEGLYNLKVVKMQHNNLARLWKM 548
Query: 380 DQRA----FV-DNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHLEASHFP 434
F+ D L + ++ N + ++P F+G + L +SL+GN L L AS F
Sbjct: 549 ANPGGPVLFLKDATNLSYLNLDYN-GIDEIPPNAFRGFSELHELSLRGNLLDQLHASVFD 607
Query: 435 -LERISFLDLSDN 446
L + +L L N
Sbjct: 608 DLNSLKYLHLQKN 620
Score = 184 (69.8 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 86/351 (24%), Positives = 150/351 (42%)
Query: 76 LRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKIS 135
+ +LD+S N++ L S + Y N L+N++ SYN ++ + KD L L+ L+ +N++
Sbjct: 56 ITTLDVSHNRLKTLSSLHM-YTN-LVNIDASYNSLAGIEKDLCLSLPHLQFLNAQHNQVY 113
Query: 136 VINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLP 195
+I++ ++ HL L LS N + E FS LK+L L + N++ LP
Sbjct: 114 LISEKDLKNCFHLTQLDLSDNKLKL--QGEPFSLLKNLTWLDVSRNKLTSAKLGTEPQLP 171
Query: 196 HQSLHYLYLNENLIETVLDNSFPFTLTN---LHTLALXXXXXXXXXXXXXVTLRTLHXXX 252
+ L L L+ N I + N F F L+N L L + TL+
Sbjct: 172 N--LVTLVLSGNNINILQKNDFSF-LSNSSSFRVLILSSLILKKVENGCFKAIDTLYDLV 228
Query: 253 XXXXXXXA-IPTKQLSKLS--ALVNLDLSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDS 309
+ T +L+ AL NL L + + F+ L K+ ++L N S
Sbjct: 229 LDSSKLTSQFTTSLFEELADTALRNLSLKSTEQVTLSNTTFQGLEKTKITVLDLSENRIS 288
Query: 310 IDQXXXXXXXXXXXXXXXXXAFSLTPLGTLKCDRLDLSGNNFSNIDSVAFKSLFSLKLVK 369
F T++ L+ ++FS + ++ + L +L+
Sbjct: 289 -------KIVDGAFQWLPQLEFLSLEHNTIR----HLTNDSFSGLGNL--RQL-NLRKAL 334
Query: 370 INLIPNLDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSL 420
I +L ID +F +QLE + + N ++L ++F G NLK++ L
Sbjct: 335 IKSHASLPVIDDFSFQHLVQLEYLCM-ANTAFRELTEQIFSGLRNLKTLDL 384
Score = 126 (49.4 bits), Expect = 0.00027, P = 0.00027
Identities = 94/409 (22%), Positives = 164/409 (40%)
Query: 58 LRENRISNVHYTLSFYIELRSLDLSVNKINV--LGSHNFEYQNKLLNLNISYNEISALSK 115
L +N++ S L LD+S NK+ LG+ + N L+ L +S N I+ L K
Sbjct: 131 LSDNKLKLQGEPFSLLKNLTWLDVSRNKLTSAKLGTEP-QLPN-LVTLVLSGNNINILQK 188
Query: 116 DTFKGLKE---LKTLDLSYNKISVINKTAFR--DTLHLELLILSFNNITYFEDSEIFSSL 170
+ F L + L LS + + F+ DTL+ L+L + +T + +F L
Sbjct: 189 NDFSFLSNSSSFRVLILSSLILKKVENGCFKAIDTLYD--LVLDSSKLTSQFTTSLFEEL 246
Query: 171 K--SLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTLA 228
+LR L L + + + + N L + L L+EN I ++D +F + L L L+
Sbjct: 247 ADTALRNLSLKSTEQVTLSNTTFQGLEKTKITVLDLSENRISKIVDGAFQW-LPQLEFLS 305
Query: 229 LXXXXXXXXXXXXXV---TLRTLHXXXXXXXXXXAIPTKQLSKLSALVNLDLSGNNFSNI 285
L LR L+ ++P LV L+ + +
Sbjct: 306 LEHNTIRHLTNDSFSGLGNLRQLNLRKALIKSHASLPVIDDFSFQHLVQLE-----YLCM 360
Query: 286 DSVAFKSLFSLKLVKINLIPNLDSIDQXXXXXXXXXXXXXXXXXAFSLTPLGTLKCDRLD 345
+ AF+ L + NL ++D +PL L+
Sbjct: 361 ANTAFRELTEQIFSGLR---NLKTLD-LSWSITGIKTVTNKTFAGLKESPL----LQTLN 412
Query: 346 LSGNNFSNIDSVAFKSLFSLKLVKINLIPNLDSIDQRA----FVDNIQLETVIINENMNL 401
L+G + ++ AF S +L NL+ + + I+Q+ F ++ + ++ N
Sbjct: 413 LTGMGINKLEPGAFSSFGNLS----NLLMSRNFINQQLQGNEFKGLSNIKEIDMSINQQS 468
Query: 402 KQLPSKLFQGNTNLKSVSLKGNSLS---HLEASHF-PLERISFLDLSDN 446
L + F + L+ + L G +L +E S F PL ++ LDLS+N
Sbjct: 469 ISLTNASFVHVSTLRILKL-GRALKGTLDMEPSPFRPLVNLTILDLSNN 516
Score = 123 (48.4 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 79/315 (25%), Positives = 130/315 (41%)
Query: 4 FLTCIFLILALTKLNKAICPSRCQCFDQKLEASCTDAGLEVVPIQLNPEVQTIILRENRI 63
F T +F LA T L S +Q ++ T GLE ++ + L ENRI
Sbjct: 238 FTTSLFEELADTALRNLSLKST----EQVTLSNTTFQGLE------KTKITVLDLSENRI 287
Query: 64 SN-VHYTLSFYIELRSLDLSVNKINVLGSHNFEYQNKLLNLNI------SYNEISALSKD 116
S V + +L L L N I L + +F L LN+ S+ + +
Sbjct: 288 SKIVDGAFQWLPQLEFLSLEHNTIRHLTNDSFSGLGNLRQLNLRKALIKSHASLPVIDDF 347
Query: 117 TFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFED--SEIFSSLKS-- 172
+F+ L +L+ L ++ + + F +L+ L LS++ IT + ++ F+ LK
Sbjct: 348 SFQHLVQLEYLCMANTAFRELTEQIFSGLRNLKTLDLSWS-ITGIKTVTNKTFAGLKESP 406
Query: 173 -LRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLD-NSFPFTLTNLHTLALX 230
L+ L L I + S+ + L L ++ N I L N F L+N+ + +
Sbjct: 407 LLQTLNLTGMGINKLEPGAFSSFGN--LSNLLMSRNFINQQLQGNEFK-GLSNIKEIDMS 463
Query: 231 XXXXXXXXXXXX-VTLRTLHXXXXXXXXXXAIPTKQLSKLSALVNL---DLSGNNFSNID 286
V + TL + + S LVNL DLS NN +NI+
Sbjct: 464 INQQSISLTNASFVHVSTLRILKLGRALKGTLDMEP-SPFRPLVNLTILDLSNNNIANIN 522
Query: 287 SVAFKSLFSLKLVKI 301
+ L++LK+VK+
Sbjct: 523 GDLLEGLYNLKVVKM 537
Score = 87 (35.7 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 25/86 (29%), Positives = 44/86 (51%)
Query: 370 INLIPN-LDSIDQRAFVDNIQLETVIINENMNLKQLPSKLFQGNTNLKSVSLKGNSLSHL 428
+NL N +D I AF +L + + N+ L QL + +F +LK + L+ N ++ +
Sbjct: 567 LNLDYNGIDEIPPNAFRGFSELHELSLRGNL-LDQLHASVFDDLNSLKYLHLQKNLITSV 625
Query: 429 EASHF--PLERISFLDLSDNPLHCDC 452
+ + F PL ++ L + NP C C
Sbjct: 626 QRATFGVPLSKLKELYMDHNPFDCTC 651
>UNIPROTKB|Q86VH5 [details] [associations]
symbol:LRRTM3 "Leucine-rich repeat transmembrane neuronal
protein 3" species:9606 "Homo sapiens" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 HOGENOM:HOG000290681
HOVERGEN:HBG052362 EMBL:AY182028 EMBL:AY358315 EMBL:AK290168
EMBL:BX640611 EMBL:BC111492 EMBL:BC113715 EMBL:BC113717
IPI:IPI00179801 IPI:IPI00607819 RefSeq:NP_821079.3
UniGene:Hs.652155 ProteinModelPortal:Q86VH5 SMR:Q86VH5
STRING:Q86VH5 PhosphoSite:Q86VH5 DMDM:68052341 PaxDb:Q86VH5
PRIDE:Q86VH5 DNASU:347731 Ensembl:ENST00000361320
Ensembl:ENST00000373722 GeneID:347731 KEGG:hsa:347731
UCSC:uc001jmy.3 UCSC:uc001jmz.1 CTD:347731 GeneCards:GC10P068685
HGNC:HGNC:19410 HPA:HPA024109 MIM:610869 neXtProt:NX_Q86VH5
PharmGKB:PA134962991 InParanoid:Q86VH5 OMA:PCTYSKS
OrthoDB:EOG45TCMT PhylomeDB:Q86VH5 GenomeRNAi:347731 NextBio:99254
ArrayExpress:Q86VH5 Bgee:Q86VH5 CleanEx:HS_LRRTM3
Genevestigator:Q86VH5 Uniprot:Q86VH5
Length = 581
Score = 188 (71.2 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 58/182 (31%), Positives = 96/182 (52%)
Query: 49 LNPEVQTIILRENRISNVHYTLSFYIE-LRSLDLSVNKINVLGSHNFEYQNKLLNLNISY 107
LN ++ + L N ISN+ I L+ L LS N+I+ ++ F L NL++SY
Sbjct: 84 LN-QLTWLYLDHNHISNIDENAFNGIRRLKELILSSNRISYFLNNTFRPVTNLRNLDLSY 142
Query: 108 NEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITYFEDSEIF 167
N++ +L + F+GL++L +L L N + I F+D +LELL L +N I + +F
Sbjct: 143 NQLHSLGSEQFRGLRKLLSLHLRSNSLRTIPVRIFQDCRNLELLDLGYNRIRSLARN-VF 201
Query: 168 SSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETVLDNSFPFTLTNLHTL 227
+ + L+ L L++NQ + + L SL LYL N I +V+ + +T ++L L
Sbjct: 202 AGMIRLKELHLEHNQFSKLNLALFPRLV--SLQNLYLQWNKI-SVIGQTMSWTWSSLQRL 258
Query: 228 AL 229
L
Sbjct: 259 DL 260
Score = 171 (65.3 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 65/230 (28%), Positives = 100/230 (43%)
Query: 79 LDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVIN 138
L L N + L + F+ N+L L + +N IS + ++ F G++ LK L LS N+IS
Sbjct: 66 LSLRYNSLQKLKYNQFKGLNQLTWLYLDHNHISNIDENAFNGIRRLKELILSSNRISYFL 125
Query: 139 KTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQS 198
FR +L L LS+N + + SE F L+ L L L +N + +P + + ++
Sbjct: 126 NNTFRPVTNLRNLDLSYNQL-HSLGSEQFRGLRKLLSLHLRSNSLRTIPVRIFQDC--RN 182
Query: 199 LHYLYLNENLIETVLDNSFPFTLTNLHTLALXXXXXXXXXXXXXVTLRTLHXXXXXXXXX 258
L L L N I ++ N F + L L L L +L
Sbjct: 183 LELLDLGYNRIRSLARNVFA-GMIRLKELHLEHNQFSKLNLALFPRLVSLQNLYLQWNKI 241
Query: 259 XAIPTKQLSKLSALVNLDLSGNNFSNIDSVAFKSLFSL--KLVKINLIPN 306
I S+L LDLSGN I++ + S+F L ++NL N
Sbjct: 242 SVIGQTMSWTWSSLQRLDLSGNE---IEAFSGPSVFQCVPNLQRLNLDSN 288
Score = 148 (57.2 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 40/112 (35%), Positives = 61/112 (54%)
Query: 101 LNLNISYNEISALSKDTFKGLKELKTLDLSYNKISVINKTAFRDTLHLELLILSFNNITY 160
L L++ YN + L + FKGL +L L L +N IS I++ AF L+ LILS N I+Y
Sbjct: 64 LGLSLRYNSLQKLKYNQFKGLNQLTWLYLDHNHISNIDENAFNGIRRLKELILSSNRISY 123
Query: 161 FEDSEIFSSLKSLRILKLDNNQILDVPNNVLSNLPHQSLHYLYLNENLIETV 212
F ++ F + +LR L L NQ+ + + L + L L+L N + T+
Sbjct: 124 FLNNT-FRPVTNLRNLDLSYNQLHSLGSEQFRGL--RKLLSLHLRSNSLRTI 172
Score = 148 (57.2 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 39/118 (33%), Positives = 61/118 (51%)
Query: 76 LRSLDLSVNKINVLGSHNFEYQNKLLNLNISYNEISALSKDTFKGLKELKTLDLSYNKIS 135
L LDL N+I L + F +L L++ +N+ S L+ F L L+ L L +NKIS
Sbjct: 183 LELLDLGYNRIRSLARNVFAGMIRLKELHLEHNQFSKLNLALFPRLVSLQNLYLQWNKIS 242
Query: 136 VINKTAFRDTLHLELLILSFNNITYFEDSEIFSSLKSLRILKLDNNQILDVPNNVLSN 193
VI +T L+ L LS N I F +F + +L+ L LD+N++ + +L +
Sbjct: 243 VIGQTMSWTWSSLQRLDLSGNEIEAFSGPSVFQCVPNLQRLNLDSNKLTFIGQEILDS 300
WARNING: HSPs involving 662 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.134 0.379 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 608 543 0.00095 119 3 11 22 0.39 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 912
No. of states in DFA: 604 (64 KB)
Total size of DFA: 271 KB (2142 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 47.25u 0.09s 47.34t Elapsed: 00:00:19
Total cpu time: 47.50u 0.10s 47.60t Elapsed: 00:00:20
Start: Thu Aug 15 12:50:00 2013 End: Thu Aug 15 12:50:20 2013
WARNINGS ISSUED: 2