BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3331
(214 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3P71|C Chain C, Crystal Structure Of The Complex Of Lcmt-1 And Pp2a
Length = 304
Score = 120 bits (301), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 57/117 (48%), Positives = 73/117 (62%), Gaps = 5/117 (4%)
Query: 98 GAFCDLVWSDPAEVETWTVSPRGAGWLFGAKVTHEFIHINHLKLICRAHQLVHEGYKYMF 157
G CDL+WSDP + W +SPRGAG+ FG ++ F H N L L+ RAHQLV EGY +
Sbjct: 193 GPMCDLLWSDPDDRGGWGISPRGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCH 252
Query: 158 DGNLVTIWSAPNYCYRCGNIASILKFNSVDNRTPALFQAVPNEERVIPDRVITPYFL 214
D N+VTI+SAPNYCYRCGN A+I++ + + F P+ R PD YFL
Sbjct: 253 DRNVVTIFSAPNYCYRCGNQAAIMELDDTLKYSFLQFDPAPHVTRRTPD-----YFL 304
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 42/94 (44%), Gaps = 37/94 (39%)
Query: 1 MSHKLDEWVEIAQQCKYLPENELKSKKFVKGGTYYTALAKMKILNFPPHVKLDNIVHRSL 60
+ +LD+W+E +CK L E+++KS
Sbjct: 6 FTKELDQWIEQLNECKQLSESQVKS----------------------------------- 30
Query: 61 ETLCDFVCSILNEESNVQHVSTPVTVCGDIHGQY 94
LC+ IL +ESNVQ V PVTVCGD+HGQ+
Sbjct: 31 --LCEKAKEILTKESNVQEVRCPVTVCGDVHGQF 62
>pdb|2IE4|C Chain C, Structure Of The Protein Phosphatase 2a Core Enzyme Bound
To Okadaic Acid
pdb|2NPP|C Chain C, Structure Of The Protein Phosphatase 2a Holoenzyme
pdb|2NPP|F Chain F, Structure Of The Protein Phosphatase 2a Holoenzyme
pdb|3DW8|C Chain C, Structure Of A Protein Phosphatase 2a Holoenzyme With B55
Subunit
pdb|3DW8|F Chain F, Structure Of A Protein Phosphatase 2a Holoenzyme With B55
Subunit
pdb|3K7V|C Chain C, Protein Phosphatase 2a Core Complex Bound To
Dinophysistoxin-1
pdb|3K7W|C Chain C, Protein Phosphatase 2a Core Complex Bound To
Dinophysistoxin-2
Length = 309
Score = 117 bits (294), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 55/117 (47%), Positives = 70/117 (59%)
Query: 98 GAFCDLVWSDPAEVETWTVSPRGAGWLFGAKVTHEFIHINHLKLICRAHQLVHEGYKYMF 157
G CDL+WSDP + W +SPRGAG+ FG ++ F H N L L+ RAHQLV EGY +
Sbjct: 193 GPMCDLLWSDPDDRGGWGISPRGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCH 252
Query: 158 DGNLVTIWSAPNYCYRCGNIASILKFNSVDNRTPALFQAVPNEERVIPDRVITPYFL 214
D N+VTI+SAPNYCYRCGN A+I++ + + F P R YFL
Sbjct: 253 DRNVVTIFSAPNYCYRCGNQAAIMELDDTLKYSFLQFDPAPRRGEPHVTRRTPDYFL 309
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 42/94 (44%), Gaps = 37/94 (39%)
Query: 1 MSHKLDEWVEIAQQCKYLPENELKSKKFVKGGTYYTALAKMKILNFPPHVKLDNIVHRSL 60
+ +LD+W+E +CK L E+++KS
Sbjct: 6 FTKELDQWIEQLNECKQLSESQVKS----------------------------------- 30
Query: 61 ETLCDFVCSILNEESNVQHVSTPVTVCGDIHGQY 94
LC+ IL +ESNVQ V PVTVCGD+HGQ+
Sbjct: 31 --LCEKAKEILTKESNVQEVRCPVTVCGDVHGQF 62
>pdb|3FGA|C Chain C, Structural Basis Of Pp2a And Sgo Interaction
Length = 309
Score = 117 bits (294), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 55/117 (47%), Positives = 70/117 (59%)
Query: 98 GAFCDLVWSDPAEVETWTVSPRGAGWLFGAKVTHEFIHINHLKLICRAHQLVHEGYKYMF 157
G CDL+WSDP + W +SPRGAG+ FG ++ F H N L L+ RAHQLV EGY +
Sbjct: 193 GPMCDLLWSDPDDRGGWGISPRGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCH 252
Query: 158 DGNLVTIWSAPNYCYRCGNIASILKFNSVDNRTPALFQAVPNEERVIPDRVITPYFL 214
D N+VTI+SAPNYCYRCGN A+I++ + + F P R YFL
Sbjct: 253 DRNVVTIFSAPNYCYRCGNQAAIMELDDTLKYSFLQFDPAPRRGEPHVTRRTPDYFL 309
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 42/94 (44%), Gaps = 37/94 (39%)
Query: 1 MSHKLDEWVEIAQQCKYLPENELKSKKFVKGGTYYTALAKMKILNFPPHVKLDNIVHRSL 60
+ +LD+W+E +CK L E+++KS
Sbjct: 6 FTKELDQWIEQLNECKQLSESQVKS----------------------------------- 30
Query: 61 ETLCDFVCSILNEESNVQHVSTPVTVCGDIHGQY 94
LC+ IL +ESNVQ V PVTVCGD+HGQ+
Sbjct: 31 --LCEKAKEILTKESNVQEVRCPVTVCGDVHGQF 62
>pdb|3C5W|C Chain C, Complex Between Pp2a-Specific Methylesterase Pme-1 And
Pp2a Core Enzyme
Length = 310
Score = 117 bits (294), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 55/117 (47%), Positives = 70/117 (59%)
Query: 98 GAFCDLVWSDPAEVETWTVSPRGAGWLFGAKVTHEFIHINHLKLICRAHQLVHEGYKYMF 157
G CDL+WSDP + W +SPRGAG+ FG ++ F H N L L+ RAHQLV EGY +
Sbjct: 194 GPMCDLLWSDPDDRGGWGISPRGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCH 253
Query: 158 DGNLVTIWSAPNYCYRCGNIASILKFNSVDNRTPALFQAVPNEERVIPDRVITPYFL 214
D N+VTI+SAPNYCYRCGN A+I++ + + F P R YFL
Sbjct: 254 DRNVVTIFSAPNYCYRCGNQAAIMELDDTLKYSFLQFDPAPRRGEPHVTRRTPDYFL 310
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 42/94 (44%), Gaps = 37/94 (39%)
Query: 1 MSHKLDEWVEIAQQCKYLPENELKSKKFVKGGTYYTALAKMKILNFPPHVKLDNIVHRSL 60
+ +LD+W+E +CK L E+++KS
Sbjct: 7 FTKELDQWIEQLNECKQLSESQVKS----------------------------------- 31
Query: 61 ETLCDFVCSILNEESNVQHVSTPVTVCGDIHGQY 94
LC+ IL +ESNVQ V PVTVCGD+HGQ+
Sbjct: 32 --LCEKAKEILTKESNVQEVRCPVTVCGDVHGQF 63
>pdb|2IE3|C Chain C, Structure Of The Protein Phosphatase 2a Core Enzyme Bound
To Tumor- Inducing Toxins
Length = 309
Score = 117 bits (294), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 55/117 (47%), Positives = 70/117 (59%)
Query: 98 GAFCDLVWSDPAEVETWTVSPRGAGWLFGAKVTHEFIHINHLKLICRAHQLVHEGYKYMF 157
G CDL+WSDP + W +SPRGAG+ FG ++ F H N L L+ RAHQLV EGY +
Sbjct: 193 GPMCDLLWSDPDDRGGWGISPRGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCH 252
Query: 158 DGNLVTIWSAPNYCYRCGNIASILKFNSVDNRTPALFQAVPNEERVIPDRVITPYFL 214
D N+VTI+SAPNYCYRCGN A+I++ + + F P R YFL
Sbjct: 253 DRNVVTIFSAPNYCYRCGNQAAIMELDDTLKYSFLQFDPAPRRGEPHVTRRTPDYFL 309
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 42/94 (44%), Gaps = 37/94 (39%)
Query: 1 MSHKLDEWVEIAQQCKYLPENELKSKKFVKGGTYYTALAKMKILNFPPHVKLDNIVHRSL 60
+ +LD+W+E +CK L E+++KS
Sbjct: 6 FTKELDQWIEQLNECKQLSESQVKS----------------------------------- 30
Query: 61 ETLCDFVCSILNEESNVQHVSTPVTVCGDIHGQY 94
LC+ IL +ESNVQ V PVTVCGD+HGQ+
Sbjct: 31 --LCEKAKEILTKESNVQEVRCPVTVCGDVHGQF 62
>pdb|2IAE|C Chain C, Crystal Structure Of A Protein Phosphatase 2a (Pp2a)
Holoenzyme.
pdb|2IAE|F Chain F, Crystal Structure Of A Protein Phosphatase 2a (Pp2a)
Holoenzyme
Length = 309
Score = 117 bits (293), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 72/114 (63%), Gaps = 5/114 (4%)
Query: 98 GAFCDLVWSDPAEVETWTVSPRGAGWLFGAKVTHEFIHINHLKLICRAHQLVHEGYKYMF 157
G CDL+WSDP + W +SPRGAG+ FG ++ F H N L L+ RAHQLV EGY +
Sbjct: 193 GPMCDLLWSDPDDRGGWGISPRGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCH 252
Query: 158 DGNLVTIWSAPNYCYRCGNIASILKFN-----SVDNRTPALFQAVPNEERVIPD 206
D N+VTI+SAPNYCYRCGN A+I++ + S PA + P+ R PD
Sbjct: 253 DRNVVTIFSAPNYCYRCGNQAAIMELDDTLKYSFLQFDPAPRRGEPHVTRRTPD 306
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 42/94 (44%), Gaps = 37/94 (39%)
Query: 1 MSHKLDEWVEIAQQCKYLPENELKSKKFVKGGTYYTALAKMKILNFPPHVKLDNIVHRSL 60
+ +LD+W+E +CK L E+++KS
Sbjct: 6 FTKELDQWIEQLNECKQLSESQVKS----------------------------------- 30
Query: 61 ETLCDFVCSILNEESNVQHVSTPVTVCGDIHGQY 94
LC+ IL +ESNVQ V PVTVCGD+HGQ+
Sbjct: 31 --LCEKAKEILTKESNVQEVRCPVTVCGDVHGQF 62
>pdb|2NYL|C Chain C, Crystal Structure Of Protein Phosphatase 2a (Pp2a)
Holoenzyme With The Catalytic Subunit Carboxyl Terminus
Truncated
pdb|2NYL|F Chain F, Crystal Structure Of Protein Phosphatase 2a (Pp2a)
Holoenzyme With The Catalytic Subunit Carboxyl Terminus
Truncated
pdb|2NYM|C Chain C, Crystal Structure Of Protein Phosphatase 2a (Pp2a) With
C-Terminus Truncated Catalytic Subunit
pdb|2NYM|F Chain F, Crystal Structure Of Protein Phosphatase 2a (Pp2a) With
C-Terminus Truncated Catalytic Subunit
Length = 293
Score = 115 bits (287), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 51/101 (50%), Positives = 66/101 (65%)
Query: 98 GAFCDLVWSDPAEVETWTVSPRGAGWLFGAKVTHEFIHINHLKLICRAHQLVHEGYKYMF 157
G CDL+WSDP + W +SPRGAG+ FG ++ F H N L L+ RAHQLV EGY +
Sbjct: 192 GPMCDLLWSDPDDRGGWGISPRGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCH 251
Query: 158 DGNLVTIWSAPNYCYRCGNIASILKFNSVDNRTPALFQAVP 198
D N+VTI+SAPNYCYRCGN A+I++ + + F P
Sbjct: 252 DRNVVTIFSAPNYCYRCGNQAAIMELDDTLKYSFLQFDPAP 292
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 42/94 (44%), Gaps = 37/94 (39%)
Query: 1 MSHKLDEWVEIAQQCKYLPENELKSKKFVKGGTYYTALAKMKILNFPPHVKLDNIVHRSL 60
+ +LD+W+E +CK L E+++KS
Sbjct: 5 FTKELDQWIEQLNECKQLSESQVKS----------------------------------- 29
Query: 61 ETLCDFVCSILNEESNVQHVSTPVTVCGDIHGQY 94
LC+ IL +ESNVQ V PVTVCGD+HGQ+
Sbjct: 30 --LCEKAKEILTKESNVQEVRCPVTVCGDVHGQF 61
>pdb|2O8A|A Chain A, Rat Pp1cgamma Complexed With Mouse Inhibitor-2
pdb|2O8A|B Chain B, Rat Pp1cgamma Complexed With Mouse Inhibitor-2
pdb|2O8G|A Chain A, Rat Pp1c Gamma Complexed With Mouse Inhibitor-2
pdb|2O8G|B Chain B, Rat Pp1c Gamma Complexed With Mouse Inhibitor-2
Length = 329
Score = 93.6 bits (231), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 70/117 (59%), Gaps = 6/117 (5%)
Query: 98 GAFCDLVWSDP-AEVETWTVSPRGAGWLFGAKVTHEFIHINHLKLICRAHQLVHEGYKYM 156
G CDL+WSDP +V W + RG + FGA+V +F+H + L LICRAHQ+V +GY++
Sbjct: 205 GLLCDLLWSDPDKDVLGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFF 264
Query: 157 FDGNLVTIWSAPNYCYRCGNIASILKFNSVDNRTPALFQAVPNEERVIPD--RVITP 211
LVT++SAPNYC N +++ SVD FQ + E+ P+ R +TP
Sbjct: 265 AKRQLVTLFSAPNYCGEFDNAGAMM---SVDETLMCSFQILKPAEKKKPNATRPVTP 318
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 9/16 (56%), Positives = 12/16 (75%)
Query: 79 HVSTPVTVCGDIHGQY 94
+ P+ +CGDIHGQY
Sbjct: 60 ELEAPLKICGDIHGQY 75
>pdb|1JK7|A Chain A, Crystal Structure Of The Tumor-Promoter Okadaic Acid Bound
To Protein Phosphatase-1
pdb|1IT6|A Chain A, Crystal Structure Of The Complex Between Calyculin A And
The Catalytic Subunit Of Protein Phosphatase 1
pdb|1IT6|B Chain B, Crystal Structure Of The Complex Between Calyculin A And
The Catalytic Subunit Of Protein Phosphatase 1
pdb|2BCD|A Chain A, X-Ray Crystal Structure Of Protein Phosphatase-1 With The
Marine Toxin Motuporin Bound
pdb|2BDX|A Chain A, X-Ray Crystal Structure Of Dihydromicrocystin-La Bound To
Protein Phosphatase-1
Length = 323
Score = 93.6 bits (231), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 70/117 (59%), Gaps = 6/117 (5%)
Query: 98 GAFCDLVWSDP-AEVETWTVSPRGAGWLFGAKVTHEFIHINHLKLICRAHQLVHEGYKYM 156
G CDL+WSDP +V W + RG + FGA+V +F+H + L LICRAHQ+V +GY++
Sbjct: 199 GLLCDLLWSDPDKDVLGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFF 258
Query: 157 FDGNLVTIWSAPNYCYRCGNIASILKFNSVDNRTPALFQAVPNEERVIPD--RVITP 211
LVT++SAPNYC N +++ SVD FQ + E+ P+ R +TP
Sbjct: 259 AKRQLVTLFSAPNYCGEFDNAGAMM---SVDETLMCSFQILKPAEKKKPNATRPVTP 312
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 9/16 (56%), Positives = 12/16 (75%)
Query: 79 HVSTPVTVCGDIHGQY 94
+ P+ +CGDIHGQY
Sbjct: 54 ELEAPLKICGDIHGQY 69
>pdb|3N5U|A Chain A, Crystal Structure Of An Rb C-Terminal Peptide Bound To The
Catalytic Subunit Of Pp1
pdb|3N5U|B Chain B, Crystal Structure Of An Rb C-Terminal Peptide Bound To The
Catalytic Subunit Of Pp1
Length = 300
Score = 90.5 bits (223), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 63/101 (62%), Gaps = 4/101 (3%)
Query: 98 GAFCDLVWSDP-AEVETWTVSPRGAGWLFGAKVTHEFIHINHLKLICRAHQLVHEGYKYM 156
G CDL+WSDP +V+ W + RG + FGA+V +F+H + L LICRAHQ+V +GY++
Sbjct: 199 GLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFF 258
Query: 157 FDGNLVTIWSAPNYCYRCGNIASILKFNSVDNRTPALFQAV 197
LVT++SAPNYC N +++ SVD FQ +
Sbjct: 259 AKRQLVTLFSAPNYCGEFDNAGAMM---SVDETLMCSFQIL 296
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 19/41 (46%)
Query: 54 NIVHRSLETLCDFVCSILNEESNVQHVSTPVTVCGDIHGQY 94
+ + LC I + + + P+ +CGDIHGQY
Sbjct: 29 QLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQY 69
>pdb|1FJM|A Chain A, Protein SerineTHREONINE PHOSPHATASE-1 (Alpha Isoform, Type
1) Complexed With Microcystin-Lr Toxin
pdb|1FJM|B Chain B, Protein SerineTHREONINE PHOSPHATASE-1 (Alpha Isoform, Type
1) Complexed With Microcystin-Lr Toxin
Length = 330
Score = 90.5 bits (223), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 63/101 (62%), Gaps = 4/101 (3%)
Query: 98 GAFCDLVWSDP-AEVETWTVSPRGAGWLFGAKVTHEFIHINHLKLICRAHQLVHEGYKYM 156
G CDL+WSDP +V+ W + RG + FGA+V +F+H + L LICRAHQ+V +GY++
Sbjct: 199 GLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFF 258
Query: 157 FDGNLVTIWSAPNYCYRCGNIASILKFNSVDNRTPALFQAV 197
LVT++SAPNYC N +++ SVD FQ +
Sbjct: 259 AKRQLVTLFSAPNYCGEFDNAGAMM---SVDETLMCSFQIL 296
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 19/41 (46%)
Query: 54 NIVHRSLETLCDFVCSILNEESNVQHVSTPVTVCGDIHGQY 94
+ + LC I + + + P+ +CGDIHGQY
Sbjct: 29 QLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQY 69
>pdb|4G9J|A Chain A, Protein SerTHR PHOSPHATASE-1 In Complex With
Cell-Permeable Peptide
pdb|4G9J|B Chain B, Protein SerTHR PHOSPHATASE-1 In Complex With
Cell-Permeable Peptide
Length = 331
Score = 90.5 bits (223), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 63/101 (62%), Gaps = 4/101 (3%)
Query: 98 GAFCDLVWSDP-AEVETWTVSPRGAGWLFGAKVTHEFIHINHLKLICRAHQLVHEGYKYM 156
G CDL+WSDP +V+ W + RG + FGA+V +F+H + L LICRAHQ+V +GY++
Sbjct: 200 GLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFF 259
Query: 157 FDGNLVTIWSAPNYCYRCGNIASILKFNSVDNRTPALFQAV 197
LVT++SAPNYC N +++ SVD FQ +
Sbjct: 260 AKRQLVTLFSAPNYCGEFDNAGAMM---SVDETLMCSFQIL 297
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 19/41 (46%)
Query: 54 NIVHRSLETLCDFVCSILNEESNVQHVSTPVTVCGDIHGQY 94
+ + LC I + + + P+ +CGDIHGQY
Sbjct: 30 QLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQY 70
>pdb|3V4Y|A Chain A, Crystal Structure Of The First Nuclear Pp1 Holoenzyme
pdb|3V4Y|C Chain C, Crystal Structure Of The First Nuclear Pp1 Holoenzyme
pdb|3V4Y|E Chain E, Crystal Structure Of The First Nuclear Pp1 Holoenzyme
pdb|3V4Y|G Chain G, Crystal Structure Of The First Nuclear Pp1 Holoenzyme
Length = 306
Score = 90.1 bits (222), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 63/101 (62%), Gaps = 4/101 (3%)
Query: 98 GAFCDLVWSDP-AEVETWTVSPRGAGWLFGAKVTHEFIHINHLKLICRAHQLVHEGYKYM 156
G CDL+WSDP +V+ W + RG + FGA+V +F+H + L LICRAHQ+V +GY++
Sbjct: 198 GLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFF 257
Query: 157 FDGNLVTIWSAPNYCYRCGNIASILKFNSVDNRTPALFQAV 197
LVT++SAPNYC N +++ SVD FQ +
Sbjct: 258 AKRQLVTLFSAPNYCGEFDNAGAMM---SVDETLMCSFQIL 295
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 19/41 (46%)
Query: 54 NIVHRSLETLCDFVCSILNEESNVQHVSTPVTVCGDIHGQY 94
+ + LC I + + + P+ +CGDIHGQY
Sbjct: 28 QLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQY 68
>pdb|3E7A|A Chain A, Crystal Structure Of Protein Phosphatase-1 Bound To The
Natural Toxin Nodularin-R
pdb|3E7A|B Chain B, Crystal Structure Of Protein Phosphatase-1 Bound To The
Natural Toxin Nodularin-R
pdb|3E7B|A Chain A, Crystal Structure Of Protein Phosphatase-1 Bound To The
Natural Toxin Inhibitor Tautomycin
pdb|3E7B|B Chain B, Crystal Structure Of Protein Phosphatase-1 Bound To The
Natural Toxin Inhibitor Tautomycin
Length = 299
Score = 90.1 bits (222), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 63/101 (62%), Gaps = 4/101 (3%)
Query: 98 GAFCDLVWSDP-AEVETWTVSPRGAGWLFGAKVTHEFIHINHLKLICRAHQLVHEGYKYM 156
G CDL+WSDP +V+ W + RG + FGA+V +F+H + L LICRAHQ+V +GY++
Sbjct: 198 GLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFF 257
Query: 157 FDGNLVTIWSAPNYCYRCGNIASILKFNSVDNRTPALFQAV 197
LVT++SAPNYC N +++ SVD FQ +
Sbjct: 258 AKRQLVTLFSAPNYCGEFDNAGAMM---SVDETLMCSFQIL 295
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 19/41 (46%)
Query: 54 NIVHRSLETLCDFVCSILNEESNVQHVSTPVTVCGDIHGQY 94
+ + LC I + + + P+ +CGDIHGQY
Sbjct: 28 QLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQY 68
>pdb|3EGG|A Chain A, Crystal Structure Of A Complex Between Protein Phosphatase
1 Alpha (Pp1) And The Pp1 Binding And Pdz Domains Of
Spinophilin
pdb|3EGG|B Chain B, Crystal Structure Of A Complex Between Protein Phosphatase
1 Alpha (Pp1) And The Pp1 Binding And Pdz Domains Of
Spinophilin
pdb|3EGH|A Chain A, Crystal Structure Of A Complex Between Protein Phosphatase
1 Alpha (Pp1), The Pp1 Binding And Pdz Domains Of
Spinophilin And The Small Natural Molecular Toxin
Nodularin-R
pdb|3EGH|B Chain B, Crystal Structure Of A Complex Between Protein Phosphatase
1 Alpha (Pp1), The Pp1 Binding And Pdz Domains Of
Spinophilin And The Small Natural Molecular Toxin
Nodularin-R
pdb|3HVQ|A Chain A, Crystal Structure Of A Complex Between Protein Phosphatase
1 Alpha (Pp1) And The Pp1 Binding And Pdz Domains Of
Neurabin
pdb|3HVQ|B Chain B, Crystal Structure Of A Complex Between Protein Phosphatase
1 Alpha (Pp1) And The Pp1 Binding And Pdz Domains Of
Neurabin
Length = 329
Score = 90.1 bits (222), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 63/101 (62%), Gaps = 4/101 (3%)
Query: 98 GAFCDLVWSDP-AEVETWTVSPRGAGWLFGAKVTHEFIHINHLKLICRAHQLVHEGYKYM 156
G CDL+WSDP +V+ W + RG + FGA+V +F+H + L LICRAHQ+V +GY++
Sbjct: 198 GLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFF 257
Query: 157 FDGNLVTIWSAPNYCYRCGNIASILKFNSVDNRTPALFQAV 197
LVT++SAPNYC N +++ SVD FQ +
Sbjct: 258 AKRQLVTLFSAPNYCGEFDNAGAMM---SVDETLMCSFQIL 295
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 19/41 (46%)
Query: 54 NIVHRSLETLCDFVCSILNEESNVQHVSTPVTVCGDIHGQY 94
+ + LC I + + + P+ +CGDIHGQY
Sbjct: 28 QLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQY 68
>pdb|1S70|A Chain A, Complex Between Protein Ser/thr Phosphatase-1 (delta) And
The Myosin Phosphatase Targeting Subunit 1 (mypt1)
Length = 330
Score = 88.6 bits (218), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 66/108 (61%), Gaps = 5/108 (4%)
Query: 98 GAFCDLVWSDP-AEVETWTVSPRGAGWLFGAKVTHEFIHINHLKLICRAHQLVHEGYKYM 156
G CDL+WSDP +V+ W + RG + FGA V +F++ + L LICRAHQ+V +GY++
Sbjct: 201 GLLCDLLWSDPDKDVQGWGENDRGVSFTFGADVVSKFLNRHDLDLICRAHQVVEDGYEFF 260
Query: 157 FDGNLVTIWSAPNYCYRCGNIASILKFNSVDNRTPALFQAV-PNEERV 203
LVT++SAPNYC N ++ SVD FQ + P+E++
Sbjct: 261 AKRQLVTLFSAPNYCGEFDNAGGMM---SVDETLMCSFQILKPSEKKA 305
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 21/44 (47%)
Query: 51 KLDNIVHRSLETLCDFVCSILNEESNVQHVSTPVTVCGDIHGQY 94
K+ + + LC I + + + P+ +CGDIHGQY
Sbjct: 28 KIVQMTEAEVRGLCIKSREIFLSQPILLELEAPLKICGDIHGQY 71
>pdb|1WAO|1 Chain 1, Pp5 Structure
pdb|1WAO|2 Chain 2, Pp5 Structure
pdb|1WAO|3 Chain 3, Pp5 Structure
pdb|1WAO|4 Chain 4, Pp5 Structure
Length = 477
Score = 84.3 bits (207), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 57/103 (55%), Gaps = 3/103 (2%)
Query: 98 GAFCDLVWSDPAEVETWTVSPRGAGWLFGAKVTHEFIHINHLKLICRAHQLVHEGYKYMF 157
G CDL+WSDP ++S RG FG VT F+ N+L I R+H++ EGY+
Sbjct: 357 GPMCDLLWSDPQPQNGRSISKRGVSCQFGPDVTKAFLEENNLDYIIRSHEVKAEGYEVAH 416
Query: 158 DGNLVTIWSAPNYCYRCGNIASILKFNSVDNRTPAL--FQAVP 198
G VT++SAPNYC + GN AS + D R P F AVP
Sbjct: 417 GGRCVTVFSAPNYCDQMGNKASYIHLQGSDLR-PQFHQFTAVP 458
>pdb|1S95|A Chain A, Structure Of SerineTHREONINE PROTEIN PHOSPHATASE 5
pdb|1S95|B Chain B, Structure Of SerineTHREONINE PROTEIN PHOSPHATASE 5
Length = 333
Score = 84.0 bits (206), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 57/103 (55%), Gaps = 3/103 (2%)
Query: 98 GAFCDLVWSDPAEVETWTVSPRGAGWLFGAKVTHEFIHINHLKLICRAHQLVHEGYKYMF 157
G CDL+WSDP ++S RG FG VT F+ N+L I R+H++ EGY+
Sbjct: 213 GPMCDLLWSDPQPQNGRSISKRGVSCQFGPDVTKAFLEENNLDYIIRSHEVKAEGYEVAH 272
Query: 158 DGNLVTIWSAPNYCYRCGNIASILKFNSVDNRTPAL--FQAVP 198
G VT++SAPNYC + GN AS + D R P F AVP
Sbjct: 273 GGRCVTVFSAPNYCDQMGNKASYIHLQGSDLR-PQFHQFTAVP 314
>pdb|1U32|A Chain A, Crystal Structure Of A Protein Phosphatase-1: Calcineurin
Hybrid Bound To Okadaic Acid
Length = 293
Score = 84.0 bits (206), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 61/101 (60%), Gaps = 4/101 (3%)
Query: 98 GAFCDLVWSDP-AEVETWTVSPRGAGWLFGAKVTHEFIHINHLKLICRAHQLVHEGYKYM 156
G CDL+WSDP +V W + RG + FGA+V +F+H + L LICRAHQ+V +GY++
Sbjct: 194 GLLCDLLWSDPDKDVLGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFF 253
Query: 157 FDGNLVTIWSAPNYCYRCGNIASILKFNSVDNRTPALFQAV 197
LVT++SAPNY N +++ SVD FQ +
Sbjct: 254 AKRQLVTLFSAPNYLDVYNNAGAMM---SVDETLMCSFQIL 291
Score = 28.9 bits (63), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 9/16 (56%), Positives = 12/16 (75%)
Query: 79 HVSTPVTVCGDIHGQY 94
+ P+ +CGDIHGQY
Sbjct: 49 ELEAPLKICGDIHGQY 64
>pdb|3H60|A Chain A, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c)with Two Mn2+ Atoms
pdb|3H60|B Chain B, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c)with Two Mn2+ Atoms
pdb|3H61|A Chain A, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Mn2+ Atoms Originally Soaked With
Norcantharidin (Which Is Present In The Structure In The
Hydrolyzed Form)
pdb|3H61|D Chain D, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Mn2+ Atoms Originally Soaked With
Norcantharidin (Which Is Present In The Structure In The
Hydrolyzed Form)
pdb|3H62|C Chain C, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Mn2+ Atoms Complexed With Cantharidic
Acid
pdb|3H62|B Chain B, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Mn2+ Atoms Complexed With Cantharidic
Acid
pdb|3H63|A Chain A, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Mn2+ Atoms Originally Soaked With
Cantharidin (Which Is Present In The Structure In The
Hydrolyzed Form)
pdb|3H63|C Chain C, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Mn2+ Atoms Originally Soaked With
Cantharidin (Which Is Present In The Structure In The
Hydrolyzed Form)
pdb|3H64|A Chain A, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Mn2+ Atoms Complexed With Endothall
pdb|3H64|D Chain D, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Mn2+ Atoms Complexed With Endothall
pdb|3H66|A Chain A, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Zn2+ Atoms
pdb|3H66|B Chain B, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Zn2+ Atoms
pdb|3H67|A Chain A, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c)with Two Zn2+ Atoms Complexed With Cantharidic
Acid
pdb|3H67|D Chain D, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c)with Two Zn2+ Atoms Complexed With Cantharidic
Acid
pdb|3H68|A Chain A, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c)with Two Zn2+ Atoms Originally Soaked With
Cantharidin (Which Is Present In The Structure In The
Hydrolyzed Form)
pdb|3H68|D Chain D, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c)with Two Zn2+ Atoms Originally Soaked With
Cantharidin (Which Is Present In The Structure In The
Hydrolyzed Form)
pdb|3H69|A Chain A, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Zn2+ Atoms Complexed With Endothall
pdb|3H69|D Chain D, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Zn2+ Atoms Complexed With Endothall
Length = 315
Score = 83.6 bits (205), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 57/103 (55%), Gaps = 3/103 (2%)
Query: 98 GAFCDLVWSDPAEVETWTVSPRGAGWLFGAKVTHEFIHINHLKLICRAHQLVHEGYKYMF 157
G CDL+WSDP ++S RG FG VT F+ N+L I R+H++ EGY+
Sbjct: 204 GPMCDLLWSDPQPQNGRSISKRGVSCQFGPDVTKAFLEENNLDYIIRSHEVKAEGYEVAH 263
Query: 158 DGNLVTIWSAPNYCYRCGNIASILKFNSVDNRTPAL--FQAVP 198
G VT++SAPNYC + GN AS + D R P F AVP
Sbjct: 264 GGRCVTVFSAPNYCDQMGNKASYIHLQGSDLR-PQFHQFTAVP 305
>pdb|3ICF|A Chain A, Structure Of Protein SerineTHREONINE PHOSPHATASE FROM
SACCHAROMYCES Cerevisiae With Similarity To Human
Phosphatase Pp5
pdb|3ICF|B Chain B, Structure Of Protein SerineTHREONINE PHOSPHATASE FROM
SACCHAROMYCES Cerevisiae With Similarity To Human
Phosphatase Pp5
Length = 335
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 66/136 (48%), Gaps = 10/136 (7%)
Query: 54 NIVHRSLETLCDFVCSILNEESNVQHVSTPVTVCG--------DIHGQYIYMGAFCDLVW 105
N +S E+L + +++N + V H P D Q GAF +L+W
Sbjct: 158 NXFAQSFESLP--LATLINNDYLVXHGGLPSDPSATLSDFKNIDRFAQPPRDGAFXELLW 215
Query: 106 SDPAEVETWTVSPRGAGWLFGAKVTHEFIHINHLKLICRAHQLVHEGYKYMFDGNLVTIW 165
+DP E S RG G FG +T F+ N L+ I R+H+L G ++ G L T++
Sbjct: 216 ADPQEANGXGPSQRGLGHAFGPDITDRFLRNNKLRKIFRSHELRXGGVQFEQKGKLXTVF 275
Query: 166 SAPNYCYRCGNIASIL 181
SAPNYC GN+ ++
Sbjct: 276 SAPNYCDSQGNLGGVI 291
>pdb|1AUI|A Chain A, Human Calcineurin Heterodimer
Length = 521
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 54/106 (50%), Gaps = 15/106 (14%)
Query: 98 GAFCDLVWSDPAE-------VETWT-VSPRGAGWLFGAKVTHEFIHINHLKLICRAHQLV 149
G CD++WSDP E E +T + RG + + EF+ N+L I RAH+
Sbjct: 225 GPMCDILWSDPLEDFGNEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQ 284
Query: 150 HEGYKYMFDG------NLVTIWSAPNYCYRCGNIASILKF-NSVDN 188
GY+ +L+TI+SAPNY N A++LK+ N+V N
Sbjct: 285 DAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNVMN 330
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 20/27 (74%)
Query: 68 CSILNEESNVQHVSTPVTVCGDIHGQY 94
SIL +E N+ + PVTVCGDIHGQ+
Sbjct: 69 ASILRQEKNLLDIDAPVTVCGDIHGQF 95
>pdb|1M63|A Chain A, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|E Chain E, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 372
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 54/106 (50%), Gaps = 15/106 (14%)
Query: 98 GAFCDLVWSDPAE-------VETWT-VSPRGAGWLFGAKVTHEFIHINHLKLICRAHQLV 149
G CD++WSDP E E +T + RG + + EF+ N+L I RAH+
Sbjct: 225 GPMCDILWSDPLEDFGNEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQ 284
Query: 150 HEGYKYMFDG------NLVTIWSAPNYCYRCGNIASILKF-NSVDN 188
GY+ +L+TI+SAPNY N A++LK+ N+V N
Sbjct: 285 DAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNVMN 330
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 20/27 (74%)
Query: 69 SILNEESNVQHVSTPVTVCGDIHGQYI 95
SIL +E N+ + PVTVCGDIHGQ+
Sbjct: 70 SILRQEKNLLDIDAPVTVCGDIHGQFF 96
>pdb|2P6B|A Chain A, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|C Chain C, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 383
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 54/106 (50%), Gaps = 15/106 (14%)
Query: 98 GAFCDLVWSDPAE-------VETWT-VSPRGAGWLFGAKVTHEFIHINHLKLICRAHQLV 149
G CD++WSDP E E +T + RG + + EF+ N+L I RAH+
Sbjct: 228 GPMCDILWSDPLEDFGNEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQ 287
Query: 150 HEGYKYMFDG------NLVTIWSAPNYCYRCGNIASILKF-NSVDN 188
GY+ +L+TI+SAPNY N A++LK+ N+V N
Sbjct: 288 DAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNVMN 333
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 20/27 (74%)
Query: 69 SILNEESNVQHVSTPVTVCGDIHGQYI 95
SIL +E N+ + PVTVCGDIHGQ+
Sbjct: 73 SILRQEKNLLDIDAPVTVCGDIHGQFF 99
>pdb|3LL8|A Chain A, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|C Chain C, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 357
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 54/106 (50%), Gaps = 15/106 (14%)
Query: 98 GAFCDLVWSDPAE-------VETWT-VSPRGAGWLFGAKVTHEFIHINHLKLICRAHQLV 149
G CD++WSDP E E +T + RG + + EF+ N+L I RAH+
Sbjct: 212 GPMCDILWSDPLEDFGNEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQ 271
Query: 150 HEGYKYMFDG------NLVTIWSAPNYCYRCGNIASILKF-NSVDN 188
GY+ +L+TI+SAPNY N A++LK+ N+V N
Sbjct: 272 DAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNVMN 317
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 20/27 (74%)
Query: 69 SILNEESNVQHVSTPVTVCGDIHGQYI 95
SIL +E N+ + PVTVCGDIHGQ+
Sbjct: 57 SILRQEKNLLDIDAPVTVCGDIHGQFF 83
>pdb|2JOG|A Chain A, Structure Of The Calcineurin-Nfat Complex
Length = 327
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 54/106 (50%), Gaps = 15/106 (14%)
Query: 98 GAFCDLVWSDPAE-------VETWTVSP-RGAGWLFGAKVTHEFIHINHLKLICRAHQLV 149
G CD++WSDP E E +T + RG + + EF+ N+L I RAH+
Sbjct: 205 GPMCDILWSDPLEDFGNEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQ 264
Query: 150 HEGYKYMFDG------NLVTIWSAPNYCYRCGNIASILKF-NSVDN 188
GY+ +L+TI+SAPNY N A++LK+ N+V N
Sbjct: 265 DAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNVMN 310
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 20/27 (74%)
Query: 69 SILNEESNVQHVSTPVTVCGDIHGQYI 95
SIL +E N+ + PVTVCGDIHGQ+
Sbjct: 50 SILRQEKNLLDIDAPVTVCGDIHGQFF 76
>pdb|1TCO|A Chain A, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
Length = 375
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 54/106 (50%), Gaps = 15/106 (14%)
Query: 98 GAFCDLVWSDPAE-------VETWT-VSPRGAGWLFGAKVTHEFIHINHLKLICRAHQLV 149
G CD++WSDP E E +T + RG + + EF+ N+L I RAH+
Sbjct: 208 GPMCDILWSDPLEDFGNEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQ 267
Query: 150 HEGYKYMFDG------NLVTIWSAPNYCYRCGNIASILKF-NSVDN 188
GY+ +L+TI+SAPNY N A++LK+ N+V N
Sbjct: 268 DAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNVMN 313
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 20/27 (74%)
Query: 69 SILNEESNVQHVSTPVTVCGDIHGQYI 95
SIL +E N+ + PVTVCGDIHGQ+
Sbjct: 53 SILRQEKNLLDIDAPVTVCGDIHGQFF 79
>pdb|1MF8|A Chain A, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 373
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 54/106 (50%), Gaps = 15/106 (14%)
Query: 98 GAFCDLVWSDPAE-------VETWT-VSPRGAGWLFGAKVTHEFIHINHLKLICRAHQLV 149
G CD++WSDP E E +T + RG + + EF+ N+L I RAH+
Sbjct: 206 GPMCDILWSDPLEDFGNEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQ 265
Query: 150 HEGYKYMFDG------NLVTIWSAPNYCYRCGNIASILKF-NSVDN 188
GY+ +L+TI+SAPNY N A++LK+ N+V N
Sbjct: 266 DAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNVMN 311
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 20/27 (74%)
Query: 69 SILNEESNVQHVSTPVTVCGDIHGQYI 95
SIL +E N+ + PVTVCGDIHGQ+
Sbjct: 51 SILRQEKNLLDIDAPVTVCGDIHGQFF 77
>pdb|2QLV|A Chain A, Crystal Structure Of The Heterotrimer Core Of The S.
Cerevisiae Ampk Homolog Snf1
pdb|2QLV|D Chain D, Crystal Structure Of The Heterotrimer Core Of The S.
Cerevisiae Ampk Homolog Snf1
Length = 171
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 77 VQHVSTPVTVCGDIHGQYIYMGAFCDLVWSDPAEVETWTVSPRGAGWLFGAKVTHEFIHI 136
++ S P+ V G+I+ +GA W+ P+E + WT+ R + T+E I
Sbjct: 50 IRSRSYPLDVMGEIYIALKNLGA----EWAKPSEEDLWTIKLRWKYDIGNKTNTNEKIP- 104
Query: 137 NHLKLICRAHQLVHEGY--KYMFDG 159
+ +K++ + Q+ Y + FDG
Sbjct: 105 DLMKMVIQLFQIETNNYLVDFKFDG 129
>pdb|3T4N|A Chain A, Structure Of The Regulatory Fragment Of Saccharomyces
Cerevisiae Ampk In Complex With Adp
pdb|3TDH|A Chain A, Structure Of The Regulatory Fragment Of Sccharomyces
Cerevisiae Ampk In Complex With Amp
pdb|3TE5|A Chain A, Structure Of The Regulatory Fragment Of Sacchromyces
Cerevisiae Ampk In Complex With Nadh
Length = 179
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 77 VQHVSTPVTVCGDIHGQYIYMGAFCDLVWSDPAEVETWTVSPRGAGWLFGAKVTHEFIHI 136
++ S P+ V G+I+ +GA W+ P+E + WT+ R + T+E I
Sbjct: 55 IRSRSYPLDVMGEIYIALKNLGA----EWAKPSEEDLWTIKLRWKYDIGNKTNTNEKIP- 109
Query: 137 NHLKLICRAHQLVHEGY--KYMFDG 159
+ +K++ + Q+ Y + FDG
Sbjct: 110 DLMKMVIQLFQIETNNYLVDFKFDG 134
>pdb|3ZZU|A Chain A, Crystal Structure Of Staphylococcus Aureus Elongation
Factor G With Mutations M16i And F88l
pdb|3ZZU|B Chain B, Crystal Structure Of Staphylococcus Aureus Elongation
Factor G With Mutations M16i And F88l
Length = 693
Score = 27.3 bits (59), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 40 KMKILNFPPHVKLDNIVHRSLETLCDFVCSILNEESNVQ 78
++ I++ P HV L V RSL L D ++L+ +S V+
Sbjct: 76 RVNIIDTPGHVDLTVEVERSLRVL-DGAVTVLDAQSGVE 113
>pdb|3ZZT|A Chain A, Crystal Structure Of Staphylococcus Aureus Elongation
Factor G With A Fusidic-Acid-Resistant Mutation F88l
pdb|3ZZT|B Chain B, Crystal Structure Of Staphylococcus Aureus Elongation
Factor G With A Fusidic-Acid-Resistant Mutation F88l
Length = 693
Score = 27.3 bits (59), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 40 KMKILNFPPHVKLDNIVHRSLETLCDFVCSILNEESNVQ 78
++ I++ P HV L V RSL L D ++L+ +S V+
Sbjct: 76 RVNIIDTPGHVDLTVEVERSLRVL-DGAVTVLDAQSGVE 113
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.138 0.451
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,291,177
Number of Sequences: 62578
Number of extensions: 301474
Number of successful extensions: 711
Number of sequences better than 100.0: 33
Number of HSP's better than 100.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 624
Number of HSP's gapped (non-prelim): 68
length of query: 214
length of database: 14,973,337
effective HSP length: 95
effective length of query: 119
effective length of database: 9,028,427
effective search space: 1074382813
effective search space used: 1074382813
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 49 (23.5 bits)