Query psy3331
Match_columns 214
No_of_seqs 232 out of 1367
Neff 6.2
Searched_HMMs 46136
Date Fri Aug 16 22:14:24 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3331.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/3331hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0372|consensus 100.0 3.1E-59 6.8E-64 401.2 7.6 175 3-214 1-303 (303)
2 KOG0373|consensus 100.0 8.3E-56 1.8E-60 375.9 9.3 175 3-214 4-306 (306)
3 PTZ00239 serine/threonine prot 100.0 9.4E-47 2E-51 336.8 16.5 174 4-214 2-303 (303)
4 KOG0371|consensus 100.0 4.9E-47 1.1E-51 327.8 8.0 174 4-214 19-319 (319)
5 cd07415 MPP_PP2A_PP4_PP6 PP2A, 100.0 4.2E-45 9.1E-50 323.8 15.1 158 4-198 1-285 (285)
6 PTZ00480 serine/threonine-prot 100.0 1.3E-44 2.9E-49 324.9 16.3 147 55-201 32-305 (320)
7 PTZ00244 serine/threonine-prot 100.0 2.1E-44 4.5E-49 320.6 14.7 142 55-196 25-293 (294)
8 cd07417 MPP_PP5_C PP5, C-termi 100.0 2.4E-44 5.2E-49 323.0 15.2 161 5-202 16-309 (316)
9 cd07414 MPP_PP1_PPKL PP1, PPKL 100.0 6.3E-44 1.4E-48 317.4 15.9 144 54-197 22-292 (293)
10 cd07420 MPP_RdgC Drosophila me 100.0 4.5E-43 9.6E-48 315.2 14.5 96 100-195 225-321 (321)
11 cd07416 MPP_PP2B PP2B, metallo 100.0 7.5E-43 1.6E-47 312.0 15.2 160 4-201 2-301 (305)
12 KOG0374|consensus 100.0 3E-42 6.6E-47 310.7 14.2 143 55-197 32-303 (331)
13 smart00156 PP2Ac Protein phosp 100.0 4.4E-41 9.6E-46 296.1 15.1 142 56-197 2-270 (271)
14 cd07418 MPP_PP7 PP7, metalloph 100.0 7.9E-40 1.7E-44 299.0 14.9 99 100-198 245-367 (377)
15 cd07419 MPP_Bsu1_C Arabidopsis 100.0 3.1E-38 6.6E-43 282.9 14.7 145 52-196 18-311 (311)
16 KOG0375|consensus 100.0 1.6E-37 3.5E-42 278.8 4.6 148 53-201 59-346 (517)
17 KOG0377|consensus 100.0 5.9E-33 1.3E-37 254.2 10.3 101 98-198 332-433 (631)
18 KOG0376|consensus 100.0 3.6E-30 7.9E-35 238.3 9.9 167 28-204 278-465 (476)
19 cd00144 MPP_PPP_family phospho 99.5 7.9E-13 1.7E-17 111.3 12.3 148 28-182 60-224 (225)
20 KOG0373|consensus 98.3 3E-07 6.4E-12 79.5 1.3 58 28-94 109-166 (306)
21 KOG0372|consensus 98.2 5.3E-07 1.1E-11 78.9 1.1 58 28-94 106-163 (303)
22 COG0639 ApaH Diadenosine tetra 98.1 4.4E-06 9.6E-11 63.8 5.5 79 83-172 75-155 (155)
23 cd07425 MPP_Shelphs Shewanella 97.8 4.3E-05 9.2E-10 64.9 5.3 122 28-167 72-196 (208)
24 cd07420 MPP_RdgC Drosophila me 97.6 5.6E-05 1.2E-09 68.6 3.4 60 28-94 115-174 (321)
25 KOG0371|consensus 97.4 7.9E-05 1.7E-09 65.8 2.1 28 28-55 123-150 (319)
26 KOG0375|consensus 97.1 0.00024 5.2E-09 65.4 1.7 27 28-54 151-177 (517)
27 KOG0374|consensus 97.0 0.00027 5.9E-09 64.5 1.3 58 28-94 123-180 (331)
28 cd07418 MPP_PP7 PP7, metalloph 96.9 0.0011 2.4E-08 61.5 4.6 59 28-93 130-188 (377)
29 cd07415 MPP_PP2A_PP4_PP6 PP2A, 96.8 0.00092 2E-08 59.7 3.1 58 28-94 105-162 (285)
30 cd07417 MPP_PP5_C PP5, C-termi 96.8 0.0017 3.6E-08 58.9 4.8 57 28-94 124-180 (316)
31 PTZ00239 serine/threonine prot 96.8 0.00084 1.8E-08 60.5 2.5 58 28-94 106-163 (303)
32 smart00156 PP2Ac Protein phosp 96.6 0.0021 4.6E-08 56.9 4.1 57 28-94 91-147 (271)
33 PTZ00480 serine/threonine-prot 96.6 0.002 4.3E-08 58.6 3.7 57 28-94 122-178 (320)
34 cd07414 MPP_PP1_PPKL PP1, PPKL 96.6 0.0018 3.8E-08 58.1 3.2 57 28-94 113-169 (293)
35 PTZ00244 serine/threonine-prot 96.6 0.0017 3.8E-08 58.2 3.1 57 28-94 115-171 (294)
36 cd07416 MPP_PP2B PP2B, metallo 96.5 0.0026 5.6E-08 57.3 4.0 57 28-94 106-162 (305)
37 cd07419 MPP_Bsu1_C Arabidopsis 96.5 0.003 6.4E-08 57.1 4.3 63 28-94 119-181 (311)
38 KOG0377|consensus 94.8 0.013 2.8E-07 55.5 1.5 66 19-94 223-288 (631)
39 KOG0376|consensus 94.5 0.038 8.3E-07 52.6 3.7 44 62-105 190-237 (476)
40 PRK11439 pphA serine/threonine 93.0 0.093 2E-06 44.6 3.2 61 83-148 18-82 (218)
41 PF08321 PPP5: PPP5 TPR repeat 92.5 0.11 2.4E-06 39.2 2.7 39 5-80 57-95 (95)
42 PRK13625 bis(5'-nucleosyl)-tet 90.8 1.9 4.1E-05 37.3 8.9 64 28-94 71-142 (245)
43 cd07421 MPP_Rhilphs Rhilph pho 90.2 0.26 5.5E-06 44.7 3.0 13 82-94 2-14 (304)
44 PRK09968 serine/threonine-spec 89.0 0.48 1E-05 40.4 3.7 62 82-148 15-80 (218)
45 PRK00166 apaH diadenosine tetr 87.6 0.57 1.2E-05 41.7 3.4 60 84-148 3-68 (275)
46 cd07422 MPP_ApaH Escherichia c 86.5 0.63 1.4E-05 41.0 3.0 61 84-149 1-67 (257)
47 cd00144 MPP_PPP_family phospho 86.5 0.53 1.2E-05 39.2 2.5 21 85-105 1-22 (225)
48 TIGR00668 apaH bis(5'-nucleosy 85.2 0.88 1.9E-05 40.8 3.3 61 83-148 2-68 (279)
49 cd07423 MPP_PrpE Bacillus subt 84.3 0.45 9.7E-06 40.7 1.0 12 83-94 2-13 (234)
50 cd07424 MPP_PrpA_PrpB PrpA and 84.2 1.2 2.5E-05 37.3 3.5 63 28-93 59-128 (207)
51 cd07424 MPP_PrpA_PrpB PrpA and 80.2 1.6 3.4E-05 36.5 2.9 12 83-94 2-13 (207)
52 PRK13625 bis(5'-nucleosyl)-tet 78.4 0.96 2.1E-05 39.1 1.0 12 83-94 2-13 (245)
53 PHA02239 putative protein phos 77.0 2.5 5.3E-05 36.7 3.1 11 84-94 3-13 (235)
54 cd07422 MPP_ApaH Escherichia c 76.3 2.8 6E-05 37.0 3.3 57 28-94 59-121 (257)
55 PRK00166 apaH diadenosine tetr 75.7 2.5 5.3E-05 37.6 2.8 57 28-94 61-123 (275)
56 cd07423 MPP_PrpE Bacillus subt 72.9 6.5 0.00014 33.5 4.7 62 28-93 72-138 (234)
57 TIGR00668 apaH bis(5'-nucleosy 71.3 4 8.7E-05 36.6 3.1 57 28-94 61-123 (279)
58 cd07399 MPP_YvnB Bacillus subt 70.1 59 0.0013 27.2 9.9 71 125-196 135-213 (214)
59 cd07413 MPP_PA3087 Pseudomonas 66.5 13 0.00029 31.5 5.3 37 64-109 116-152 (222)
60 cd07413 MPP_PA3087 Pseudomonas 63.1 3.2 7E-05 35.3 0.8 18 85-102 2-20 (222)
61 PF12850 Metallophos_2: Calcin 61.8 48 0.001 25.2 7.3 57 125-184 96-152 (156)
62 cd00844 MPP_Dbr1_N Dbr1 RNA la 55.7 5.2 0.00011 35.3 0.8 11 84-94 1-11 (262)
63 cd07425 MPP_Shelphs Shewanella 55.4 4.9 0.00011 33.9 0.6 10 85-94 1-10 (208)
64 PF10083 DUF2321: Uncharacteri 52.3 5.2 0.00011 33.0 0.2 49 123-177 20-77 (158)
65 PF09637 Med18: Med18 protein; 52.2 18 0.00039 31.5 3.7 70 126-198 139-211 (250)
66 cd02977 ArsC_family Arsenate R 40.7 26 0.00057 25.8 2.5 23 65-89 77-99 (105)
67 cd03032 ArsC_Spx Arsenate Redu 38.3 26 0.00056 26.6 2.2 23 65-89 77-99 (115)
68 TIGR01617 arsC_related transcr 37.5 29 0.00063 26.3 2.4 23 65-89 78-100 (117)
69 PRK01655 spxA transcriptional 36.7 31 0.00066 27.1 2.4 23 65-89 77-99 (131)
70 COG1424 BioW Pimeloyl-CoA synt 34.8 32 0.00069 29.7 2.3 16 62-77 92-107 (239)
71 COG2908 Uncharacterized protei 33.1 66 0.0014 28.3 4.1 56 125-188 174-229 (237)
72 cd08165 MPP_MPPE1 human MPPE1 28.2 37 0.00081 27.1 1.7 14 80-93 121-134 (156)
73 PF11144 DUF2920: Protein of u 28.0 92 0.002 29.5 4.4 74 5-94 123-196 (403)
74 COG3168 PilP Tfp pilus assembl 25.8 1.3E+02 0.0027 25.1 4.3 71 106-186 71-142 (170)
75 PRK13344 spxA transcriptional 25.5 60 0.0013 25.5 2.4 23 65-89 77-99 (132)
76 COG1875 NYN ribonuclease and A 25.4 51 0.0011 31.2 2.2 63 6-90 325-387 (436)
77 KOG1503|consensus 25.2 40 0.00086 30.2 1.4 16 79-94 234-249 (354)
78 cd07400 MPP_YydB Bacillus subt 25.1 2.4E+02 0.0053 21.2 5.8 29 126-154 101-129 (144)
79 cd08164 MPP_Ted1 Saccharomyces 24.3 23 0.0005 30.0 -0.3 16 79-94 142-157 (193)
80 KOG0918|consensus 22.5 46 0.00099 31.8 1.3 103 83-195 152-261 (476)
81 TIGR02118 conserved hypothetic 22.3 74 0.0016 23.3 2.2 35 57-92 63-99 (100)
82 TIGR00014 arsC arsenate reduct 21.9 89 0.0019 23.7 2.7 23 65-89 77-99 (114)
83 PF02562 PhoH: PhoH-like prote 21.1 32 0.00069 29.4 0.0 49 23-90 107-155 (205)
84 cd07380 MPP_CWF19_N Schizosacc 20.9 39 0.00085 27.3 0.5 10 85-94 1-10 (150)
85 PRK14835 undecaprenyl pyrophos 20.6 1E+02 0.0023 27.5 3.2 49 41-90 91-139 (275)
86 PF03960 ArsC: ArsC family; I 20.2 91 0.002 23.2 2.4 22 65-88 74-95 (110)
No 1
>KOG0372|consensus
Probab=100.00 E-value=3.1e-59 Score=401.22 Aligned_cols=175 Identities=55% Similarity=1.059 Sum_probs=167.3
Q ss_pred ccHHHHHHHHHhCCCCCcccccccccccCCcchhhhhhhhhcCCCCCccccccchhHHHHHHHHHHHHHhcCCCccccCC
Q psy3331 3 HKLDEWVEIAQQCKYLPENELKSKKFVKGGTYYTALAKMKILNFPPHVKLDNIVHRSLETLCDFVCSILNEESNVQHVST 82 (214)
Q Consensus 3 ~~~~~~~~~~~~~~~~~e~~~~~~~~~rGnh~~~~~~~~~~~~~e~~~~~~~~~~~~l~~l~~~a~~il~~ep~ll~l~~ 82 (214)
+++|+.|+++.++++++|.+|+ .||.++++||.+|||++.+++
T Consensus 1 ~dldr~ie~L~~~~li~E~eV~-------------------------------------~LC~~~~eiL~~E~NV~~i~t 43 (303)
T KOG0372|consen 1 SDLDRQIEQLRRCELIAESEVK-------------------------------------ALCAKVREILVEESNVQRIDT 43 (303)
T ss_pred CcHHHHHHHHHhcCCCcHHHHH-------------------------------------HHHHHHHHHHhcCCCceecCC
Confidence 4799999999999999999999 999999999999999999999
Q ss_pred CeeEeccccccc------------------cch-----------------------------------------------
Q psy3331 83 PVTVCGDIHGQY------------------IYM----------------------------------------------- 97 (214)
Q Consensus 83 pv~vvGDiHGq~------------------LFL----------------------------------------------- 97 (214)
||+||||||||| |||
T Consensus 44 PvtvcGDIHGQf~Dllelf~igG~~~~t~YLFLGDyVDRG~~SvEt~lLLl~lK~rYP~ritLiRGNHEsRqitqvYGFY 123 (303)
T KOG0372|consen 44 PVTVCGDIHGQFYDLLELFRIGGDVPETNYLFLGDYVDRGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFY 123 (303)
T ss_pred CcEEeecccchHHHHHHHHHhCCCCCCCceEeecchhccccchHHHHHHHHHHhhcCcceeEEeeccchhhhhhhhhhHH
Confidence 999999999999 666
Q ss_pred --------------------------------------------------------------hhhhhhhcCCCCCCCCCc
Q psy3331 98 --------------------------------------------------------------GAFCDLVWSDPAEVETWT 115 (214)
Q Consensus 98 --------------------------------------------------------------gl~~DlLWSDP~~~~g~~ 115 (214)
|.+||||||||.+..||+
T Consensus 124 ~EclrKYG~~~vWr~c~eiFdyL~l~aiid~kifCVHGGlSP~i~~lDqIr~lDR~~Eiph~g~m~DllWSDPee~~g~~ 203 (303)
T KOG0372|consen 124 DECLRKYGSANVWRYCTEIFDYLSLAAIIDGKIFCVHGGLSPSIQTLDQIRVLDRKQEVPHDGAMCDLLWSDPEEGPGWG 203 (303)
T ss_pred HHHHHHcCChHHHHHHHHHHHhhhHhheecCcEEEEcCCCCcchhhHHHHHHhhccccCCCCCcchheeccCcccCCCcc
Confidence 999999999999999999
Q ss_pred cCCCCCceEeCHHHHHHHHhhcCcceEEeccccccccceEeeCCcEEEEecCCCCCcCCCCcEEEEEEcCCCceeeEEee
Q psy3331 116 VSPRGAGWLFGAKVTHEFIHINHLKLICRAHQLVHEGYKYMFDGNLVTIWSAPNYCYRCGNIASILKFNSVDNRTPALFQ 195 (214)
Q Consensus 116 ~s~RG~g~~FG~~~v~~Fl~~n~l~~IiRaHq~v~~Gy~~~~~~~~iTVfSA~nY~~~~~N~aAvl~i~~~~~~~f~~f~ 195 (214)
.||||+||+||++++++||+.||+++|+||||++++||++.|+.+++|||||||||++|+|.||||++|++....|++|+
T Consensus 204 ~SPRGaGylFG~dvv~~F~~~N~~~~I~RaHQLv~eGyk~~F~~~v~TVWSAPNYCYrCGN~AsIl~lde~~~~~F~vFe 283 (303)
T KOG0372|consen 204 LSPRGAGYLFGEDVVESFLEANGLSLICRAHQLVMEGYKWHFDEKVVTVWSAPNYCYRCGNVAAILELDEDLDKDFRVFE 283 (303)
T ss_pred cCCCCccccccHHHHHHHHHhCChHHHHHHHHHHHhhHHHhcCCceEEEecCCchhhhcCChHHheeeccccCcceEeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCC-CCCCCCCC
Q psy3331 196 AVPNEERVIPD-RVITPYFL 214 (214)
Q Consensus 196 ~~~~~~~~~~~-~~~~~~~~ 214 (214)
++|.+.+..+. +.+.+||+
T Consensus 284 aa~~~~~~~~~kk~~~~yFl 303 (303)
T KOG0372|consen 284 AAPQESRGIPAKKPIADYFL 303 (303)
T ss_pred cchhhhcCCcccCcchhhcC
Confidence 99988886664 45667886
No 2
>KOG0373|consensus
Probab=100.00 E-value=8.3e-56 Score=375.91 Aligned_cols=175 Identities=70% Similarity=1.315 Sum_probs=169.5
Q ss_pred ccHHHHHHHHHhCCCCCcccccccccccCCcchhhhhhhhhcCCCCCccccccchhHHHHHHHHHHHHHhcCCCccccCC
Q psy3331 3 HKLDEWVEIAQQCKYLPENELKSKKFVKGGTYYTALAKMKILNFPPHVKLDNIVHRSLETLCDFVCSILNEESNVQHVST 82 (214)
Q Consensus 3 ~~~~~~~~~~~~~~~~~e~~~~~~~~~rGnh~~~~~~~~~~~~~e~~~~~~~~~~~~l~~l~~~a~~il~~ep~ll~l~~ 82 (214)
.++|+||+.++.|++|||+|++ .||+.++++|+.|+|++.+++
T Consensus 4 ~d~d~wi~~vk~ckyLpE~elk-------------------------------------~LCe~v~d~L~eEsNvqPV~t 46 (306)
T KOG0373|consen 4 MDLDQWIETVKKCKYLPENELK-------------------------------------RLCEMVKDILMEESNVQPVST 46 (306)
T ss_pred CCHHHHHHHHHHcCCCCHHHHH-------------------------------------HHHHHHHHHHhhhcCccccCC
Confidence 5899999999999999999999 999999999999999999999
Q ss_pred CeeEeccccccc------------------cch-----------------------------------------------
Q psy3331 83 PVTVCGDIHGQY------------------IYM----------------------------------------------- 97 (214)
Q Consensus 83 pv~vvGDiHGq~------------------LFL----------------------------------------------- 97 (214)
||+||||||||| +||
T Consensus 47 PVTvCGDIHGQFyDL~eLFrtgG~vP~tnYiFmGDfVDRGyySLEtfT~l~~LkaryP~~ITLlRGNHEsRqitqVYGFy 126 (306)
T KOG0373|consen 47 PVTVCGDIHGQFYDLLELFRTGGQVPDTNYIFMGDFVDRGYYSLETFTLLLLLKARYPAKITLLRGNHESRQITQVYGFY 126 (306)
T ss_pred CeeEeeccchhHHHHHHHHHhcCCCCCcceEEeccccccccccHHHHHHHHHHhhcCCceeEEeeccchhhhhhhhhhhH
Confidence 999999999999 444
Q ss_pred --------------------------------------------------------------hhhhhhhcCCCCCCCCCc
Q psy3331 98 --------------------------------------------------------------GAFCDLVWSDPAEVETWT 115 (214)
Q Consensus 98 --------------------------------------------------------------gl~~DlLWSDP~~~~g~~ 115 (214)
|.+|||+||||.+.+.|.
T Consensus 127 dECq~KYGnan~wkycckVFD~LtlaAiID~~vLCVHGGLSPdirtlDqir~i~R~qEiPh~G~fcDlmWSDPedve~W~ 206 (306)
T KOG0373|consen 127 DECQNKYGNANVWKYCCKVFDFLTLAAIIDEKVLCVHGGLSPDIRTLDQIRLIERNQEIPHEGPFCDLMWSDPEDVETWA 206 (306)
T ss_pred HHHHhhcCCchHHHHHHHHHhhhhHHHHhcCcEEEEcCCCCccceeHHHHHhHHhhccCCCCCCccceeccChhhhhhhe
Confidence 999999999999999999
Q ss_pred cCCCCCceEeCHHHHHHHHhhcCcceEEeccccccccceEeeCCc-EEEEecCCCCCcCCCCcEEEEEEcCCCceeeEEe
Q psy3331 116 VSPRGAGWLFGAKVTHEFIHINHLKLICRAHQLVHEGYKYMFDGN-LVTIWSAPNYCYRCGNIASILKFNSVDNRTPALF 194 (214)
Q Consensus 116 ~s~RG~g~~FG~~~v~~Fl~~n~l~~IiRaHq~v~~Gy~~~~~~~-~iTVfSA~nY~~~~~N~aAvl~i~~~~~~~f~~f 194 (214)
.|+||+|++||.+++.+|++-|++++|+||||+|++||++.|+.+ ++|||||||||++|+|.||||.++++++.++++|
T Consensus 207 vSpRGAGwlFGskVt~eF~~iN~L~LicRaHQLV~EG~KymF~eK~lvTVWSAPNYCYRCGNvAsi~~~d~~~~r~~k~F 286 (306)
T KOG0373|consen 207 VSPRGAGWLFGSKVTTEFNHINNLNLICRAHQLVQEGFKYMFDEKGLVTVWSAPNYCYRCGNVASIMSFDDNLERETKIF 286 (306)
T ss_pred eCCCCcceeechhhhHHHHhccchHHHHhHHHHHHhhHHhccCCCCEEEEecCCchhhhccCeeeEEEecccCCccceee
Confidence 999999999999999999999999999999999999999999887 9999999999999999999999999999999999
Q ss_pred ecCCCCCCCCCCCCCCCCCC
Q psy3331 195 QAVPNEERVIPDRVITPYFL 214 (214)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~ 214 (214)
.++|..++..+++...+||+
T Consensus 287 ~avpd~~~~~p~r~~~pYFl 306 (306)
T KOG0373|consen 287 SAVPDNSRVIPPRTRAPYFL 306 (306)
T ss_pred eecCCccccCCCCCCCCCcC
Confidence 99999998888888899996
No 3
>PTZ00239 serine/threonine protein phosphatase 2A; Provisional
Probab=100.00 E-value=9.4e-47 Score=336.83 Aligned_cols=174 Identities=57% Similarity=1.046 Sum_probs=159.2
Q ss_pred cHHHHHHHHHhCCCCCcccccccccccCCcchhhhhhhhhcCCCCCccccccchhHHHHHHHHHHHHHhcCCCccccCCC
Q psy3331 4 KLDEWVEIAQQCKYLPENELKSKKFVKGGTYYTALAKMKILNFPPHVKLDNIVHRSLETLCDFVCSILNEESNVQHVSTP 83 (214)
Q Consensus 4 ~~~~~~~~~~~~~~~~e~~~~~~~~~rGnh~~~~~~~~~~~~~e~~~~~~~~~~~~l~~l~~~a~~il~~ep~ll~l~~p 83 (214)
++|++|+.+++...++++++. +||++|+++|.+||+++++++|
T Consensus 2 ~~~~~~~~~~~~~~l~~~~i~-------------------------------------~l~~~~~~il~~e~~~~~i~~~ 44 (303)
T PTZ00239 2 DIDRHIATLLNGGCLPERDLK-------------------------------------LICERAKEIFLEESNVQPVRAP 44 (303)
T ss_pred CHHHHHHHHHccCCCCHHHHH-------------------------------------HHHHHHHHHHHhCCCeEecCCC
Confidence 589999999998889999999 9999999999999999999999
Q ss_pred eeEeccccccc------------------cch------------------------------------------------
Q psy3331 84 VTVCGDIHGQY------------------IYM------------------------------------------------ 97 (214)
Q Consensus 84 v~vvGDiHGq~------------------LFL------------------------------------------------ 97 (214)
+.|+||||||| +||
T Consensus 45 i~vvGDIHG~~~~L~~l~~~~~~~~~~~~lfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~ 124 (303)
T PTZ00239 45 VNVCGDIHGQFYDLQALFKEGGDIPNANYIFIGDFVDRGYNSVETMEYLLCLKVKYPGNITLLRGNHESRQCTQVYGFYE 124 (303)
T ss_pred EEEEEeCCCCHHHHHHHHHhcCCCCCceEEEeeeEcCCCCCHHHHHHHHHHhhhcCCCcEEEEecccchHHHhhhcChHH
Confidence 99999999999 333
Q ss_pred -------------------------------------------------------------hhhhhhhcCCCCCCCCCcc
Q psy3331 98 -------------------------------------------------------------GAFCDLVWSDPAEVETWTV 116 (214)
Q Consensus 98 -------------------------------------------------------------gl~~DlLWSDP~~~~g~~~ 116 (214)
++++|+|||||.+.++|.+
T Consensus 125 e~~~ky~~~~~~~~~~~~f~~LPlaaii~~~i~cvHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~ 204 (303)
T PTZ00239 125 EILRKYGNSNPWRLFMDVFDCLPLAALIEGQILCVHGGLSPDMRTIDQIRTIDRKIEIPHEGPFCDLMWSDPEEVEYWAV 204 (303)
T ss_pred HHHHHhcChhHHHHHHHHHHhCchheEEcCeEEEEcCccCcccccHhhhccccCCCCCCCCCCceeeEecCccccCCCcc
Confidence 6789999999998889999
Q ss_pred CCCCCceEeCHHHHHHHHhhcCcceEEeccccccccceEeeCC-cEEEEecCCCCCcCCCCcEEEEEEcCCCceeeEEee
Q psy3331 117 SPRGAGWLFGAKVTHEFIHINHLKLICRAHQLVHEGYKYMFDG-NLVTIWSAPNYCYRCGNIASILKFNSVDNRTPALFQ 195 (214)
Q Consensus 117 s~RG~g~~FG~~~v~~Fl~~n~l~~IiRaHq~v~~Gy~~~~~~-~~iTVfSA~nY~~~~~N~aAvl~i~~~~~~~f~~f~ 195 (214)
|+||+|++||++++++||++||+++||||||++++||++.+++ +|+|||||||||+.++|+||+|.++++++++|++|+
T Consensus 205 ~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~~iTvfSa~~Y~~~~~N~~ail~i~~~~~~~~~~~~ 284 (303)
T PTZ00239 205 NSRGAGYLFGAKVTKEFCRLNDLTLICRAHQLVMEGYKYWFPDQNLVTVWSAPNYCYRCGNIASILCLDENLQQTWKTFK 284 (303)
T ss_pred CCCCCccccCHHHHHHHHHHCCCcEEEEcChhhccceEEEeCCCeEEEEECCCcccCCCCceEEEEEECCCCcEeeEEee
Confidence 9999999999999999999999999999999999999988754 599999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCCCCCCC
Q psy3331 196 AVPNEERVIPDRVITPYFL 214 (214)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~ 214 (214)
|++.+.+..+.+..+.||+
T Consensus 285 ~~~~~~~~~~~~~~~~~~~ 303 (303)
T PTZ00239 285 EVPESAKSINPKNVLPYFL 303 (303)
T ss_pred CCCcccccCcccCCCCCCC
Confidence 9988755545555556874
No 4
>KOG0371|consensus
Probab=100.00 E-value=4.9e-47 Score=327.81 Aligned_cols=174 Identities=48% Similarity=0.896 Sum_probs=168.2
Q ss_pred cHHHHHHHHHhCCCCCcccccccccccCCcchhhhhhhhhcCCCCCccccccchhHHHHHHHHHHHHHhcCCCccccCCC
Q psy3331 4 KLDEWVEIAQQCKYLPENELKSKKFVKGGTYYTALAKMKILNFPPHVKLDNIVHRSLETLCDFVCSILNEESNVQHVSTP 83 (214)
Q Consensus 4 ~~~~~~~~~~~~~~~~e~~~~~~~~~rGnh~~~~~~~~~~~~~e~~~~~~~~~~~~l~~l~~~a~~il~~ep~ll~l~~p 83 (214)
++|.||+.+..|+.++|.++. .+|..|+++|.+|.++..++.|
T Consensus 19 ~vd~~ie~L~~ck~lse~~v~-------------------------------------~lc~~a~~~L~~e~nV~~v~~p 61 (319)
T KOG0371|consen 19 DVDPWIEQLYKCKPLSEVDVS-------------------------------------SLCLLAKEILDKEENVQPVNCP 61 (319)
T ss_pred ccccchHHHHhcCCCccccch-------------------------------------hHHHHHHHHHhccccccccccc
Confidence 589999999999999999999 9999999999999999999999
Q ss_pred eeEeccccccc------------------cch------------------------------------------------
Q psy3331 84 VTVCGDIHGQY------------------IYM------------------------------------------------ 97 (214)
Q Consensus 84 v~vvGDiHGq~------------------LFL------------------------------------------------ 97 (214)
++||||+|||| |||
T Consensus 62 vtvcGDvHGqf~dl~ELfkiGG~~pdtnylfmGDyvdrGy~SvetVS~lva~Kvry~~rvtilrGNHEsrqitqvygfyd 141 (319)
T KOG0371|consen 62 VTVCGDVHGQFHDLIELFKIGGLAPDTNYLFMGDYVDRGYYSVETVSLLVALKVRYPDRVTILRGNHESRQITQVYGFYD 141 (319)
T ss_pred eEEecCcchhHHHHHHHHHccCCCCCcceeeeeeecccccchHHHHHHHHHhhccccceeEEecCchHHHHHHHHHhhHH
Confidence 99999999999 555
Q ss_pred -------------------------------------------------------------hhhhhhhcCCCCCCCCCcc
Q psy3331 98 -------------------------------------------------------------GAFCDLVWSDPAEVETWTV 116 (214)
Q Consensus 98 -------------------------------------------------------------gl~~DlLWSDP~~~~g~~~ 116 (214)
|.+||||||||++.-||+.
T Consensus 142 eclRkyg~anvw~~Ftdlfdy~P~tali~~~ifc~HGgLspsi~tld~~r~~dr~~evphegpmcDlLwsdpddr~gwg~ 221 (319)
T KOG0371|consen 142 ECLRKYGNANVWKYFTDLFDYLPLTALIESKIFCLHGGLSPSIDTLDLIRLLDRIQEVPHEGPMCDLLWSDPDDRCGWGI 221 (319)
T ss_pred HHHhhcccccchHHhhhhhhccchHhhhccceeeccCCcCcccchHHHHHHHHHhhcccCCCChhheeccCcccCCCCCC
Confidence 9999999999999999999
Q ss_pred CCCCCceEeCHHHHHHHHhhcCcceEEeccccccccceEeeCCcEEEEecCCCCCcCCCCcEEEEEEcCCCceeeEEeec
Q psy3331 117 SPRGAGWLFGAKVTHEFIHINHLKLICRAHQLVHEGYKYMFDGNLVTIWSAPNYCYRCGNIASILKFNSVDNRTPALFQA 196 (214)
Q Consensus 117 s~RG~g~~FG~~~v~~Fl~~n~l~~IiRaHq~v~~Gy~~~~~~~~iTVfSA~nY~~~~~N~aAvl~i~~~~~~~f~~f~~ 196 (214)
|+||+|+.||++..++|.++||+++|.|+||.+++||.|.+...++|+|||||||++|+|.||+|.++++...+|.+|+|
T Consensus 222 sprgag~tfg~di~~~fn~~n~lslisRahqlvm~g~nW~~~~~~vtiFSapnycYrcgn~a~i~e~d~~~~~~f~q~~p 301 (319)
T KOG0371|consen 222 SPRGAGYTFGQDISEQFNHKNGLSLISRAHQLVMEGYNWYHLWNVVTIFSAPNYCYRCGNQAAIMERDDTKNYDFLQFDP 301 (319)
T ss_pred CCCCCCcccchhhHHHhhccCCchHhHHHHHHHhcccceeeecceeEEccCCchhhccccHHHHhhhhhccCcceEEecC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCC
Q psy3331 197 VPNEERVIPDRVITPYFL 214 (214)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~ 214 (214)
+|.+-++...++.++|||
T Consensus 302 sp~k~e~~vtr~tpDYfL 319 (319)
T KOG0371|consen 302 SPRKVEPDVTRKTPDYFL 319 (319)
T ss_pred CccccccccccCCCCCcC
Confidence 988877777889999997
No 5
>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain. PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2
Probab=100.00 E-value=4.2e-45 Score=323.80 Aligned_cols=158 Identities=59% Similarity=1.177 Sum_probs=149.8
Q ss_pred cHHHHHHHHHhCCCCCcccccccccccCCcchhhhhhhhhcCCCCCccccccchhHHHHHHHHHHHHHhcCCCccccCCC
Q psy3331 4 KLDEWVEIAQQCKYLPENELKSKKFVKGGTYYTALAKMKILNFPPHVKLDNIVHRSLETLCDFVCSILNEESNVQHVSTP 83 (214)
Q Consensus 4 ~~~~~~~~~~~~~~~~e~~~~~~~~~rGnh~~~~~~~~~~~~~e~~~~~~~~~~~~l~~l~~~a~~il~~ep~ll~l~~p 83 (214)
++|++|+++.++..++++++. +||++|+++|.+||+++++++|
T Consensus 1 ~~~~~~~~~~~~~~l~~~~~~-------------------------------------~l~~~~~~il~~e~~~~~i~~~ 43 (285)
T cd07415 1 DLDKWIEQLKKCELLPESEVK-------------------------------------SLCEKAKEILVKESNVQRVRSP 43 (285)
T ss_pred CHHHHHHHHHccCCCCHHHHH-------------------------------------HHHHHHHHHHHhCCCEEecCCC
Confidence 378999999998888988888 9999999999999999999999
Q ss_pred eeEeccccccc------------------cch------------------------------------------------
Q psy3331 84 VTVCGDIHGQY------------------IYM------------------------------------------------ 97 (214)
Q Consensus 84 v~vvGDiHGq~------------------LFL------------------------------------------------ 97 (214)
++|+||||||| +||
T Consensus 44 i~vvGDIHG~~~dL~~ll~~~~~~~~~~~lfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~ygf~~ 123 (285)
T cd07415 44 VTVCGDIHGQFYDLLELFRVGGDPPDTNYLFLGDYVDRGYYSVETFLLLLALKVRYPDRITLLRGNHESRQITQVYGFYD 123 (285)
T ss_pred EEEEEeCCCCHHHHHHHHHHcCCCCCCeEEEEeEECCCCcCHHHHHHHHHHHhhcCCCcEEEEecccchHhhhhhcchhH
Confidence 99999999999 333
Q ss_pred -------------------------------------------------------------hhhhhhhcCCCCCCCCCcc
Q psy3331 98 -------------------------------------------------------------GAFCDLVWSDPAEVETWTV 116 (214)
Q Consensus 98 -------------------------------------------------------------gl~~DlLWSDP~~~~g~~~ 116 (214)
++++|+|||||.+..+|.+
T Consensus 124 e~~~~y~~~~l~~~~~~~f~~lPlaaii~~~i~cvHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~ 203 (285)
T cd07415 124 ECLRKYGNANVWKYCTDLFDYLPLAALIDNQIFCVHGGLSPSIDTLDQIRAIDRFQEVPHEGPMCDLLWSDPDDIEGWGI 203 (285)
T ss_pred HHHHhcCchHHHHHHHHHHHHhHHHhEeCCeEEEEcCCCCCCcccHHHhhcccCCCCCCCCCCccceEecCCCccCCCCc
Confidence 6789999999998889999
Q ss_pred CCCCCceEeCHHHHHHHHhhcCcceEEeccccccccceEeeCCcEEEEecCCCCCcCCCCcEEEEEEcCCCceeeEEeec
Q psy3331 117 SPRGAGWLFGAKVTHEFIHINHLKLICRAHQLVHEGYKYMFDGNLVTIWSAPNYCYRCGNIASILKFNSVDNRTPALFQA 196 (214)
Q Consensus 117 s~RG~g~~FG~~~v~~Fl~~n~l~~IiRaHq~v~~Gy~~~~~~~~iTVfSA~nY~~~~~N~aAvl~i~~~~~~~f~~f~~ 196 (214)
|+||.|++||++++++||++||+++||||||++++||++.++++|+|||||||||+.++|+||+|.|+++++++|++|+|
T Consensus 204 ~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~~TvfSa~~y~~~~~n~~a~l~i~~~~~~~~~~~~~ 283 (285)
T cd07415 204 SPRGAGYLFGQDVVEEFNHNNGLTLICRAHQLVMEGYQWMFDDKLVTVWSAPNYCYRCGNVASIMELDEHLKRSFKVFEA 283 (285)
T ss_pred CCCCCccccCHHHHHHHHHHCCCeEEEEcCccccceEEEecCCcEEEEecCCcccCCCCceEEEEEECCCCcEeEEEecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999997
Q ss_pred CC
Q psy3331 197 VP 198 (214)
Q Consensus 197 ~~ 198 (214)
.+
T Consensus 284 ~~ 285 (285)
T cd07415 284 AP 285 (285)
T ss_pred CC
Confidence 64
No 6
>PTZ00480 serine/threonine-protein phosphatase; Provisional
Probab=100.00 E-value=1.3e-44 Score=324.85 Aligned_cols=147 Identities=32% Similarity=0.744 Sum_probs=137.1
Q ss_pred cchhHHHHHHHHHHHHHhcCCCccccCCCeeEeccccccc------------------cch-------------------
Q psy3331 55 IVHRSLETLCDFVCSILNEESNVQHVSTPVTVCGDIHGQY------------------IYM------------------- 97 (214)
Q Consensus 55 ~~~~~l~~l~~~a~~il~~ep~ll~l~~pv~vvGDiHGq~------------------LFL------------------- 97 (214)
++.+++.+||++|+++|.+||+++++++|++|||||||+| |||
T Consensus 32 l~~~~i~~l~~~~~~il~~ep~ll~i~~~i~vvGDIHG~~~dL~~l~~~~g~~~~~~ylfLGDyVDRG~~s~evl~ll~~ 111 (320)
T PTZ00480 32 LTEAEVRGLCIKARDIFISQPILLELEAPLKICGDVHGQYFDLLRLFEYGGYPPESNYLFLGDYVDRGKQSLETICLLLA 111 (320)
T ss_pred CCHHHHHHHHHHHHHHHHhCCceEecCCCeEEEeecccCHHHHHHHHHhcCCCCcceEEEeceecCCCCCcHHHHHHHHH
Confidence 4556666999999999999999999999999999999999 333
Q ss_pred --------------------------------------------------------------------------------
Q psy3331 98 -------------------------------------------------------------------------------- 97 (214)
Q Consensus 98 -------------------------------------------------------------------------------- 97 (214)
T Consensus 112 lki~~p~~v~llRGNHE~~~~~~~ygF~~e~~~~y~~~l~~~~~~~F~~LPlaAiI~~~i~cvHGGI~p~~~~l~~i~~i 191 (320)
T PTZ00480 112 YKIKYPENFFLLRGNHECASINRIYGFYDECKRRYTIKLWKTFTDCFNCLPVAALIDEKILCMHGGLSPELSNLEQIRRI 191 (320)
T ss_pred hcccCCCceEEEecccchhhhhhhcchHHHHHhhcCHHHHHHHHHHHHhccHhheecCcEEEEcCCcCcccCCHHHHhcc
Confidence
Q ss_pred ---------hhhhhhhcCCCCC-CCCCccCCCCCceEeCHHHHHHHHhhcCcceEEeccccccccceEeeCCcEEEEecC
Q psy3331 98 ---------GAFCDLVWSDPAE-VETWTVSPRGAGWLFGAKVTHEFIHINHLKLICRAHQLVHEGYKYMFDGNLVTIWSA 167 (214)
Q Consensus 98 ---------gl~~DlLWSDP~~-~~g~~~s~RG~g~~FG~~~v~~Fl~~n~l~~IiRaHq~v~~Gy~~~~~~~~iTVfSA 167 (214)
++++|+|||||.+ ..+|.+|+||+|++||++++++||++||+++||||||++++||++.++++|+|||||
T Consensus 192 ~rp~~~~~~~~~~dllWSDP~~~~~~~~~s~RG~g~~FG~~~~~~Fl~~n~l~~IiR~Hq~v~~G~~~~~~~~~iTvFSa 271 (320)
T PTZ00480 192 MRPTDVPDTGLLCDLLWSDPDKDVQGWADNERGVSYVFSQEIVQVFLKKHELDLICRAHQVVEDGYEFFSKRQLVTLFSA 271 (320)
T ss_pred cCCCCCCccchhhheeecCcccccCCCccCCCCCccccCHHHHHHHHHhCCCcEEEEcCccccCceEEeCCCcEEEEeCC
Confidence 6789999999986 689999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcCCCCcEEEEEEcCCCceeeEEeecCCCCC
Q psy3331 168 PNYCYRCGNIASILKFNSVDNRTPALFQAVPNEE 201 (214)
Q Consensus 168 ~nY~~~~~N~aAvl~i~~~~~~~f~~f~~~~~~~ 201 (214)
||||+.++|+||+|.|++++.++|++|+|.+.+.
T Consensus 272 ~~Y~~~~~N~ga~l~i~~~~~~~~~~~~p~~~~~ 305 (320)
T PTZ00480 272 PNYCGEFDNAGSMMTIDESLMCSFQILKPAEQGQ 305 (320)
T ss_pred cccCCCCCccEEEEEECCCCcEeEEEecCCcccc
Confidence 9999999999999999999999999999776553
No 7
>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional
Probab=100.00 E-value=2.1e-44 Score=320.59 Aligned_cols=142 Identities=34% Similarity=0.717 Sum_probs=133.8
Q ss_pred cchhHHHHHHHHHHHHHhcCCCccccCCCeeEeccccccc------------------cch-------------------
Q psy3331 55 IVHRSLETLCDFVCSILNEESNVQHVSTPVTVCGDIHGQY------------------IYM------------------- 97 (214)
Q Consensus 55 ~~~~~l~~l~~~a~~il~~ep~ll~l~~pv~vvGDiHGq~------------------LFL------------------- 97 (214)
++.+++.+||++|+++|.+||+++++++|++|+||||||| |||
T Consensus 25 i~~~~i~~l~~~~~~il~~e~~ll~i~~p~~ViGDIHG~~~~L~~l~~~~~~~~~~~~lfLGDyVDRG~~s~evl~ll~~ 104 (294)
T PTZ00244 25 IREEDIRAVLTEVREIFMSQPMLLEIRPPVRVCGDTHGQYYDLLRIFEKCGFPPYSNYLFLGDYVDRGKHSVETITLQFC 104 (294)
T ss_pred CCHHHHHHHHHHHHHHHHhCCCeEeccCCceeeccCCCCHHHHHHHHHHcCCCCcccEEEeeeEecCCCCHHHHHHHHHH
Confidence 4566777999999999999999999999999999999999 333
Q ss_pred --------------------------------------------------------------------------------
Q psy3331 98 -------------------------------------------------------------------------------- 97 (214)
Q Consensus 98 -------------------------------------------------------------------------------- 97 (214)
T Consensus 105 lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~y~~~l~~~~~~~f~~lPlaaii~~~il~vHgGi~p~~~~l~~i~~i 184 (294)
T PTZ00244 105 YKIVYPENFFLLRGNHECASINKMYGFFDDVKRRYNIKLFKAFTDVFNTMPVCCVISEKIICMHGGLSPDLTSLASVNEI 184 (294)
T ss_pred HhhccCCeEEEEecccchHhHhhccChHHHHHHHhhHHHHHHHHHHHHhCchheEecCeeEEEcCCCCchhhHHHHhhhh
Confidence
Q ss_pred ---------hhhhhhhcCCCCC-CCCCccCCCCCceEeCHHHHHHHHhhcCcceEEeccccccccceEeeCCcEEEEecC
Q psy3331 98 ---------GAFCDLVWSDPAE-VETWTVSPRGAGWLFGAKVTHEFIHINHLKLICRAHQLVHEGYKYMFDGNLVTIWSA 167 (214)
Q Consensus 98 ---------gl~~DlLWSDP~~-~~g~~~s~RG~g~~FG~~~v~~Fl~~n~l~~IiRaHq~v~~Gy~~~~~~~~iTVfSA 167 (214)
++++|+|||||.+ ..+|.+|+||.|++||++++++||++||+++||||||++++||+++++++|+|||||
T Consensus 185 ~rp~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~Hq~~~~G~~~~~~~~~iTvfSa 264 (294)
T PTZ00244 185 ERPCDVPDRGILCDLLWADPEDEVRGFLESDRGVSYLFGEDIVNDFLDMVDMDLIVRAHQVMERGYGFFASRQLVTVFSA 264 (294)
T ss_pred ccccCCCccchhheeeecCcccccCCCCcCCCCCccccCHHHHHHHHHHcCCcEEEEcCccccCceEEcCCCeEEEEeCC
Confidence 6789999999986 689999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcCCCCcEEEEEEcCCCceeeEEeec
Q psy3331 168 PNYCYRCGNIASILKFNSVDNRTPALFQA 196 (214)
Q Consensus 168 ~nY~~~~~N~aAvl~i~~~~~~~f~~f~~ 196 (214)
||||+..+|+||+|.|++++.++|++|.+
T Consensus 265 ~~Y~~~~~N~~a~l~i~~~~~~~f~~~~~ 293 (294)
T PTZ00244 265 PNYCGEFDNDAAVMNIDDKLQCSFLIIPA 293 (294)
T ss_pred ccccCCCCceEEEEEECCCCcEeEEEeec
Confidence 99999999999999999999999999875
No 8
>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain. Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel
Probab=100.00 E-value=2.4e-44 Score=322.99 Aligned_cols=161 Identities=34% Similarity=0.628 Sum_probs=151.3
Q ss_pred HHHHHHHHHhCCCCCcccccccccccCCcchhhhhhhhhcCCCCCccccccchhHHHHHHHHHHHHHhcCCCccccCCC-
Q psy3331 5 LDEWVEIAQQCKYLPENELKSKKFVKGGTYYTALAKMKILNFPPHVKLDNIVHRSLETLCDFVCSILNEESNVQHVSTP- 83 (214)
Q Consensus 5 ~~~~~~~~~~~~~~~e~~~~~~~~~rGnh~~~~~~~~~~~~~e~~~~~~~~~~~~l~~l~~~a~~il~~ep~ll~l~~p- 83 (214)
+|++++++++++.|+++++. +||.+|+++|.+||++++++.|
T Consensus 16 ~~~~~~~~~~~~~l~~~~~~-------------------------------------~l~~~~~~il~~ep~l~~i~~p~ 58 (316)
T cd07417 16 VKEMIEWFKDQKKLHKKYAY-------------------------------------QILLQVKELLKKLPSLVEITIPE 58 (316)
T ss_pred HHHHHHHHHccCCCCHHHHH-------------------------------------HHHHHHHHHHHhCCcceeccCCC
Confidence 78899999988888888888 9999999999999999999988
Q ss_pred ---eeEeccccccc-------------------cch--------------------------------------------
Q psy3331 84 ---VTVCGDIHGQY-------------------IYM-------------------------------------------- 97 (214)
Q Consensus 84 ---v~vvGDiHGq~-------------------LFL-------------------------------------------- 97 (214)
++||||||||| +||
T Consensus 59 ~~~~~VvGDIHG~~~dL~~ll~~~g~~~~~~~ylFLGDyVDRG~~S~Evl~ll~~lki~~p~~v~lLRGNHE~~~~~~~~ 138 (316)
T cd07417 59 GEKITVCGDTHGQFYDLLNIFELNGLPSETNPYLFNGDFVDRGSFSVEVILTLFAFKLLYPNHFHLNRGNHETDNMNKMY 138 (316)
T ss_pred CceeEEeecccCCHHHHHHHHHhcCCCCccCeEEEEeeEecCCCChHHHHHHHHHhhhccCCceEEEeeccchHHHHHHh
Confidence 99999999999 333
Q ss_pred -----------------------------------------------------------------hhhhhhhcCCCCCCC
Q psy3331 98 -----------------------------------------------------------------GAFCDLVWSDPAEVE 112 (214)
Q Consensus 98 -----------------------------------------------------------------gl~~DlLWSDP~~~~ 112 (214)
++++|+|||||.+..
T Consensus 139 gf~~e~~~k~~~~l~~~~~~~f~~LPlaaii~~~~~~vHgGi~~~~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~ 218 (316)
T cd07417 139 GFEGEVKAKYNEQMFDLFSEVFNWLPLAHLINGKVLVVHGGLFSDDGVTLDDIRKIDRFRQPPDSGLMCELLWSDPQPQP 218 (316)
T ss_pred hhcchhhhcccHHHHHHHHHHHHhchHhheeCCeEEEEccccccCCCccHHHhhcccCCCCCCccccceeeeecCCCCCC
Confidence 568999999999888
Q ss_pred CCccCCCCCceEeCHHHHHHHHhhcCcceEEeccccccccceEeeCCcEEEEecCCCCCcCCCCcEEEEEEcC-CCceee
Q psy3331 113 TWTVSPRGAGWLFGAKVTHEFIHINHLKLICRAHQLVHEGYKYMFDGNLVTIWSAPNYCYRCGNIASILKFNS-VDNRTP 191 (214)
Q Consensus 113 g~~~s~RG~g~~FG~~~v~~Fl~~n~l~~IiRaHq~v~~Gy~~~~~~~~iTVfSA~nY~~~~~N~aAvl~i~~-~~~~~f 191 (214)
+|.+|+||+|+.||++++++||++||+++||||||++++||++.++++|+|||||||||+.++|+||+|.|++ +++++|
T Consensus 219 ~~~~s~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~~TvfSa~~Y~~~~~N~ga~~~i~~~~~~~~~ 298 (316)
T cd07417 219 GRSPSKRGVGCQFGPDVTKRFLEENNLEYIIRSHEVKDEGYEVEHDGKCITVFSAPNYCDQMGNKGAFIRITGSDLKPKF 298 (316)
T ss_pred CCCccCCCCceEeCHHHHHHHHHHcCCcEEEECCcccceeEEEecCCeEEEEeCCccccCCCCcceEEEEEeCCCceeee
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999 899999
Q ss_pred EEeecCCCCCC
Q psy3331 192 ALFQAVPNEER 202 (214)
Q Consensus 192 ~~f~~~~~~~~ 202 (214)
++|++++++..
T Consensus 299 ~~~~~~~~~~~ 309 (316)
T cd07417 299 TQFEAVPHPNV 309 (316)
T ss_pred EeccCCCCCCC
Confidence 99999887654
No 9
>cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain. PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg
Probab=100.00 E-value=6.3e-44 Score=317.37 Aligned_cols=144 Identities=34% Similarity=0.764 Sum_probs=134.9
Q ss_pred ccchhHHHHHHHHHHHHHhcCCCccccCCCeeEeccccccc------------------cch------------------
Q psy3331 54 NIVHRSLETLCDFVCSILNEESNVQHVSTPVTVCGDIHGQY------------------IYM------------------ 97 (214)
Q Consensus 54 ~~~~~~l~~l~~~a~~il~~ep~ll~l~~pv~vvGDiHGq~------------------LFL------------------ 97 (214)
.++++++.+||++|+++|.+||+++++++|+.|||||||+| |||
T Consensus 22 ~~~~~~i~~l~~~~~~il~~ep~~l~i~~~i~viGDIHG~~~~L~~l~~~~~~~~~~~~lfLGDyVDRG~~s~e~i~ll~ 101 (293)
T cd07414 22 QLTEAEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLL 101 (293)
T ss_pred CCCHHHHHHHHHHHHHHHHhCCCeEecCCceEEEEecCCCHHHHHHHHHhcCCCCcceEEEEeeEecCCCCcHHHHHHHH
Confidence 45566777999999999999999999999999999999999 333
Q ss_pred --------------------------------------------------------------------------------
Q psy3331 98 -------------------------------------------------------------------------------- 97 (214)
Q Consensus 98 -------------------------------------------------------------------------------- 97 (214)
T Consensus 102 ~lk~~~p~~i~llrGNHE~~~~~~~~gf~~e~~~~y~~~l~~~~~~~f~~lPlaa~i~~~i~cvHgGi~p~~~~l~~i~~ 181 (293)
T cd07414 102 AYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAIIDEKIFCMHGGLSPDLQSMEQIRR 181 (293)
T ss_pred HhhhhCCCcEEEEecccchhhHhhhcchhhHHHHhhhHHHHHHHHHHHHHhHHHHhhCCcEEEEccCCCcccCcHHHHhc
Confidence
Q ss_pred ----------hhhhhhhcCCCCC-CCCCccCCCCCceEeCHHHHHHHHhhcCcceEEeccccccccceEeeCCcEEEEec
Q psy3331 98 ----------GAFCDLVWSDPAE-VETWTVSPRGAGWLFGAKVTHEFIHINHLKLICRAHQLVHEGYKYMFDGNLVTIWS 166 (214)
Q Consensus 98 ----------gl~~DlLWSDP~~-~~g~~~s~RG~g~~FG~~~v~~Fl~~n~l~~IiRaHq~v~~Gy~~~~~~~~iTVfS 166 (214)
++++|+|||||.+ ..+|.+|+||.|++||++++++||++||+++||||||++++||++.++++|+||||
T Consensus 182 i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~iTvfS 261 (293)
T cd07414 182 IMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGKDVVAKFLNKHDLDLICRAHQVVEDGYEFFAKRQLVTLFS 261 (293)
T ss_pred ccCCCCCCchhhHhhhhccCcccccCCCccCCCCcceecCHHHHHHHHHHcCCeEEEECCccccCeEEEeCCCcEEEEec
Confidence 6789999999986 68999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcCCCCcEEEEEEcCCCceeeEEeecC
Q psy3331 167 APNYCYRCGNIASILKFNSVDNRTPALFQAV 197 (214)
Q Consensus 167 A~nY~~~~~N~aAvl~i~~~~~~~f~~f~~~ 197 (214)
|||||+.++|+||+|.|++++.++|++|+|.
T Consensus 262 a~~Y~~~~~N~~a~l~i~~~~~~~~~~~~~~ 292 (293)
T cd07414 262 APNYCGEFDNAGAMMSVDETLMCSFQILKPA 292 (293)
T ss_pred CCcccCCCCceEEEEEECCCCcEEEEEecCC
Confidence 9999999999999999999999999999854
No 10
>cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain. RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all
Probab=100.00 E-value=4.5e-43 Score=315.17 Aligned_cols=96 Identities=29% Similarity=0.512 Sum_probs=90.4
Q ss_pred hhhhhcCCCCCCCC-CccCCCCCceEeCHHHHHHHHhhcCcceEEeccccccccceEeeCCcEEEEecCCCCCcCCCCcE
Q psy3331 100 FCDLVWSDPAEVET-WTVSPRGAGWLFGAKVTHEFIHINHLKLICRAHQLVHEGYKYMFDGNLVTIWSAPNYCYRCGNIA 178 (214)
Q Consensus 100 ~~DlLWSDP~~~~g-~~~s~RG~g~~FG~~~v~~Fl~~n~l~~IiRaHq~v~~Gy~~~~~~~~iTVfSA~nY~~~~~N~a 178 (214)
++|+|||||.+..+ |.+++||+|++||++++++||++|++++||||||++++||++.++++|+|||||||||+.++|+|
T Consensus 225 ~~dlLWSDP~~~~~~~~~~~RG~g~~FG~~~~~~Fl~~n~l~~IIR~He~v~~G~~~~~~~~~iTvFSa~nY~~~~~N~g 304 (321)
T cd07420 225 ILDILWSDPKAQKGCKPNTFRGGGCYFGPDVTSKVLQKHGLSLLIRSHECKPEGYEFCHNNKVITIFSASNYYEEGSNRG 304 (321)
T ss_pred hheeeecCCccCCCCCccCCCCCccccCHHHHHHHHHHCCCcEEEEcChhhhcceEEecCCeEEEEecCCccCCCCCccE
Confidence 46899999997555 77789999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEcCCCceeeEEee
Q psy3331 179 SILKFNSVDNRTPALFQ 195 (214)
Q Consensus 179 Avl~i~~~~~~~f~~f~ 195 (214)
|+|.|++++.++|++|.
T Consensus 305 avl~i~~~~~~~f~~~~ 321 (321)
T cd07420 305 AYIKLGPDLTPHFVQYQ 321 (321)
T ss_pred EEEEECCCCceeEEEeC
Confidence 99999999999999884
No 11
>cd07416 MPP_PP2B PP2B, metallophosphatase domain. PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G
Probab=100.00 E-value=7.5e-43 Score=312.00 Aligned_cols=160 Identities=34% Similarity=0.603 Sum_probs=145.5
Q ss_pred cHHHHHHHHHhCCCCCcccccccccccCCcchhhhhhhhhcCCCCCccccccchhHHHHHHHHHHHHHhcCCCccccCCC
Q psy3331 4 KLDEWVEIAQQCKYLPENELKSKKFVKGGTYYTALAKMKILNFPPHVKLDNIVHRSLETLCDFVCSILNEESNVQHVSTP 83 (214)
Q Consensus 4 ~~~~~~~~~~~~~~~~e~~~~~~~~~rGnh~~~~~~~~~~~~~e~~~~~~~~~~~~l~~l~~~a~~il~~ep~ll~l~~p 83 (214)
.++-+++.+.++..++++++. +||++|+++|.+||+++++++|
T Consensus 2 ~~~~~~~~~~~~~~l~~~~i~-------------------------------------~l~~~~~~il~~e~~l~~i~~~ 44 (305)
T cd07416 2 RIDVLKAHFMREGRLSEEDAL-------------------------------------RIITEGAEILRQEPNLLRIEAP 44 (305)
T ss_pred CHHHHHHHHHcCCCCCHHHHH-------------------------------------HHHHHHHHHHHhCCCeEccCCC
Confidence 367788888888888888888 9999999999999999999999
Q ss_pred eeEeccccccc------------------cch------------------------------------------------
Q psy3331 84 VTVCGDIHGQY------------------IYM------------------------------------------------ 97 (214)
Q Consensus 84 v~vvGDiHGq~------------------LFL------------------------------------------------ 97 (214)
++||||||||| +||
T Consensus 45 i~ViGDIHG~~~dL~~l~~~~g~~~~~~ylFLGDyVDRG~~s~Evi~lL~~lki~~p~~v~lLRGNHE~~~l~~~~gf~~ 124 (305)
T cd07416 45 VTVCGDIHGQFYDLLKLFEVGGSPANTRYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQ 124 (305)
T ss_pred EEEEEeCCCCHHHHHHHHHhcCCCCCceEEEECCccCCCCChHHHHHHHHHHHhhcCCCEEEEeCCCcHHHHHHhhCchh
Confidence 99999999999 344
Q ss_pred ------------------------------------------------------------hhhhhhhcCCCCCC------
Q psy3331 98 ------------------------------------------------------------GAFCDLVWSDPAEV------ 111 (214)
Q Consensus 98 ------------------------------------------------------------gl~~DlLWSDP~~~------ 111 (214)
++++|+|||||.+.
T Consensus 125 e~~~~y~~~l~~~~~~~f~~LPlaaii~~~i~~vHGGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~ 204 (305)
T cd07416 125 ECKIKYSERVYDACMEAFDCLPLAALMNQQFLCVHGGLSPELKTLDDIRKLDRFREPPAFGPMCDLLWSDPLEDFGNEKT 204 (305)
T ss_pred HHHHhccHHHHHHHHHHHhhccceeEEcCCEEEEcCCCCcccccHHHhcccCCCCCCCCCCcceeeeecCcccccccccc
Confidence 67899999999752
Q ss_pred -CCCccC-CCCCceEeCHHHHHHHHhhcCcceEEeccccccccceEeeCC------cEEEEecCCCCCcCCCCcEEEEEE
Q psy3331 112 -ETWTVS-PRGAGWLFGAKVTHEFIHINHLKLICRAHQLVHEGYKYMFDG------NLVTIWSAPNYCYRCGNIASILKF 183 (214)
Q Consensus 112 -~g~~~s-~RG~g~~FG~~~v~~Fl~~n~l~~IiRaHq~v~~Gy~~~~~~------~~iTVfSA~nY~~~~~N~aAvl~i 183 (214)
.+|.+| +||+|++||++++++||++||+++||||||++++||++++++ +|+|||||||||+.++|+||+|.|
T Consensus 205 ~~~~~~~~~Rg~g~~fG~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~~~~~~~iTvFSa~~Y~~~~~N~~a~l~i 284 (305)
T cd07416 205 QEHFVHNTVRGCSYFYSYRAVCEFLQKNNLLSIIRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKY 284 (305)
T ss_pred cccccccCCCCCceecCHHHHHHHHHHcCCeEEEEeccccccceEEecCCCcCCCCcEEEEeCCccccCCCCceEEEEEE
Confidence 247765 899999999999999999999999999999999999998876 899999999999999999999999
Q ss_pred cCCCceeeEEeecCCCCC
Q psy3331 184 NSVDNRTPALFQAVPNEE 201 (214)
Q Consensus 184 ~~~~~~~f~~f~~~~~~~ 201 (214)
+++. ++|++|+++|++.
T Consensus 285 ~~~~-~~~~~~~~~~~~~ 301 (305)
T cd07416 285 ENNV-MNIRQFNCSPHPY 301 (305)
T ss_pred cCCc-ceEEEecCCCCCC
Confidence 8874 7999999999864
No 12
>KOG0374|consensus
Probab=100.00 E-value=3e-42 Score=310.72 Aligned_cols=143 Identities=35% Similarity=0.736 Sum_probs=138.0
Q ss_pred cchhHHHHHHHHHHHHHhcCCCccccCCCeeEeccccccc-------------------cch------------------
Q psy3331 55 IVHRSLETLCDFVCSILNEESNVQHVSTPVTVCGDIHGQY-------------------IYM------------------ 97 (214)
Q Consensus 55 ~~~~~l~~l~~~a~~il~~ep~ll~l~~pv~vvGDiHGq~-------------------LFL------------------ 97 (214)
++.+++.+||.+++++|.++|+++++++||+||||||||| |||
T Consensus 32 l~~~ei~~l~~~~~~if~~~~~l~e~~aPV~i~GDiHGq~~DLlrlf~~~g~~pp~~~ylFLGDYVDRG~~slE~i~LL~ 111 (331)
T KOG0374|consen 32 LSKSEIIKLCDKAREIFLSQPTLLELSAPVKIVGDIHGQFGDLLRLFDLLGSFPPDQNYVFLGDYVDRGKQSLETICLLF 111 (331)
T ss_pred ccHHHHHHHHHHHHHHhcCCCceeecCCCEEEEccCcCCHHHHHHHHHhcCCCCCcccEEEecccccCCccceEEeehhh
Confidence 6778888999999999999999999999999999999999 455
Q ss_pred --------------------------------------------------------------------------------
Q psy3331 98 -------------------------------------------------------------------------------- 97 (214)
Q Consensus 98 -------------------------------------------------------------------------------- 97 (214)
T Consensus 112 a~Ki~yp~~~~lLRGNHE~~~in~~yGFydE~~rr~~~~~~w~~F~~~f~~mp~~a~i~~kI~CmhGGlsp~l~~~~~i~ 191 (331)
T KOG0374|consen 112 ALKIKYPENVFLLRGNHECASINRIYGFYDECKRRYGEIKLWKAFNDAFNCLPLAALIDGKILCMHGGLSPHLKSLDQIR 191 (331)
T ss_pred hhhhhCCceEEEeccccccccccceeeeHHHHHHhcchHHHHHHHHHHHhhCchhheecceEEEecCCCChhhcChHHHh
Confidence
Q ss_pred -----------hhhhhhhcCCCCC-CCCCccCCCCCceEeCHHHHHHHHhhcCcceEEeccccccccceEeeCCcEEEEe
Q psy3331 98 -----------GAFCDLVWSDPAE-VETWTVSPRGAGWLFGAKVTHEFIHINHLKLICRAHQLVHEGYKYMFDGNLVTIW 165 (214)
Q Consensus 98 -----------gl~~DlLWSDP~~-~~g~~~s~RG~g~~FG~~~v~~Fl~~n~l~~IiRaHq~v~~Gy~~~~~~~~iTVf 165 (214)
|+++|||||||.. ..||.+|.||++++||++++++||+++++++|+||||++++||+++.+++++|||
T Consensus 192 ~i~rp~~~~~~gll~DLlWsdp~~~~~g~~~n~Rg~s~~fg~~~v~~f~~~~~ldlivRaHqvv~dGyeffa~r~lvTIF 271 (331)
T KOG0374|consen 192 AIPRPTDSPDKGLLCDLLWSDPDDDVPGWEENDRGVSFTFGPAVVEDFCKKLDLDLIVRAHQVVEDGYEFFAGRKLVTIF 271 (331)
T ss_pred hccCCcCCCccceeeeeeecCCCCCCCCcccCCCceeeEecHHHHHHHHHHhCcceEEEcCccccccceEecCceEEEEe
Confidence 7999999999997 6999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCcCCCCcEEEEEEcCCCceeeEEeecC
Q psy3331 166 SAPNYCYRCGNIASILKFNSVDNRTPALFQAV 197 (214)
Q Consensus 166 SA~nY~~~~~N~aAvl~i~~~~~~~f~~f~~~ 197 (214)
||||||+++.|.||+|.||+++.++|.+++|.
T Consensus 272 SAP~Ycg~~~n~gavm~Vd~~l~~sf~~l~p~ 303 (331)
T KOG0374|consen 272 SAPNYCGEFDNAGAVMRVDKNLKCSFVILRPE 303 (331)
T ss_pred cCchhccccCCceEEEEECCCCeEEEEEeccc
Confidence 99999999999999999999999999999995
No 13
>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain. Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members.
Probab=100.00 E-value=4.4e-41 Score=296.06 Aligned_cols=142 Identities=45% Similarity=0.784 Sum_probs=134.0
Q ss_pred chhHHHHHHHHHHHHHhcCCCccccCCCeeEeccccccc------------------cch--------------------
Q psy3331 56 VHRSLETLCDFVCSILNEESNVQHVSTPVTVCGDIHGQY------------------IYM-------------------- 97 (214)
Q Consensus 56 ~~~~l~~l~~~a~~il~~ep~ll~l~~pv~vvGDiHGq~------------------LFL-------------------- 97 (214)
+++++.+||++|+++|.+||++++++.|+.|+|||||+| +||
T Consensus 2 ~~~~i~~l~~~~~~il~~e~~~~~i~~~i~vvGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~VDrG~~s~e~l~~l~~l 81 (271)
T smart00156 2 YAEEILELLREVKEIFRQEPNLVEVSAPVTVCGDIHGQFDDLLRLFDLNGPPPDTNYVFLGDYVDRGPFSIEVILLLFAL 81 (271)
T ss_pred CHHHHHHHHHHHHHHHHhCCCeEEeCCCEEEEEeCcCCHHHHHHHHHHcCCCCCceEEEeCCccCCCCChHHHHHHHHHH
Confidence 467788999999999999999999999999999999999 333
Q ss_pred --------------------------------------------------------------------------------
Q psy3331 98 -------------------------------------------------------------------------------- 97 (214)
Q Consensus 98 -------------------------------------------------------------------------------- 97 (214)
T Consensus 82 k~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~l~~~~~~~f~~LPl~aii~~~~~~vHgGi~~~~~~l~~i~~i~ 161 (271)
T smart00156 82 KILYPNRVVLLRGNHESRSMNEIYGFYDECKRKYGEEIYEKFQEAFSWLPLAALIDNKILCMHGGLSPDLTTLDDIRKLK 161 (271)
T ss_pred HhcCCCCEEEEeccccHHHHHHhccchhhhhhhcCHHHHHHHHHHHhhChhheEEcCeEEEEecCCCCccCCHHHHhccc
Confidence
Q ss_pred --------hhhhhhhcCCCCC-CCCCccCCCCCceEeCHHHHHHHHhhcCcceEEeccccccccceEeeCCcEEEEecCC
Q psy3331 98 --------GAFCDLVWSDPAE-VETWTVSPRGAGWLFGAKVTHEFIHINHLKLICRAHQLVHEGYKYMFDGNLVTIWSAP 168 (214)
Q Consensus 98 --------gl~~DlLWSDP~~-~~g~~~s~RG~g~~FG~~~v~~Fl~~n~l~~IiRaHq~v~~Gy~~~~~~~~iTVfSA~ 168 (214)
++++|+|||||.. ..+|.+|+||.|+.||++++++||++||+++||||||++++||++.++++|+||||||
T Consensus 162 r~~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~~TvfSa~ 241 (271)
T smart00156 162 RPQEPPDEGLLIDLLWSDPDQPVDGFQPSIRGASYYFGPDAVDEFLKKNNLKLIIRAHQVVDDGYEFFHDRKLVTIFSAP 241 (271)
T ss_pred CCCCCCchhhhhheeecCCCcccCCCccCCCCCccccCHHHHHHHHHHCCCeEEEecCcccCCcEEEecCCcEEEEECCc
Confidence 6789999999964 7899999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcCCCCcEEEEEEcCCCceeeEEeecC
Q psy3331 169 NYCYRCGNIASILKFNSVDNRTPALFQAV 197 (214)
Q Consensus 169 nY~~~~~N~aAvl~i~~~~~~~f~~f~~~ 197 (214)
|||+.++|+||++.|+++++++|++|+|.
T Consensus 242 ~y~~~~~n~~a~~~i~~~~~~~~~~~~~~ 270 (271)
T smart00156 242 NYCGRFGNKAAVLKVDKDLKLSFEQFKPG 270 (271)
T ss_pred ccccCCCceEEEEEECCCCcEEEEEecCC
Confidence 99999999999999999999999999864
No 14
>cd07418 MPP_PP7 PP7, metallophosphatase domain. PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-,
Probab=100.00 E-value=7.9e-40 Score=299.05 Aligned_cols=99 Identities=35% Similarity=0.605 Sum_probs=90.4
Q ss_pred hhhhhcCCCCCCCCCccC-CCCCceEeCHHHHHHHHhhcCcceEEecccc------------ccccceEeeC---CcEEE
Q psy3331 100 FCDLVWSDPAEVETWTVS-PRGAGWLFGAKVTHEFIHINHLKLICRAHQL------------VHEGYKYMFD---GNLVT 163 (214)
Q Consensus 100 ~~DlLWSDP~~~~g~~~s-~RG~g~~FG~~~v~~Fl~~n~l~~IiRaHq~------------v~~Gy~~~~~---~~~iT 163 (214)
++|||||||.+..+|.+| +||+|++||++++++||++|++++||||||+ +++||++.++ ++|+|
T Consensus 245 ~~dlLWSDP~~~~g~~~~~~RG~g~~FG~~~~~~FL~~n~l~~IIRsHe~~~~~~~~~~~~~v~~Gy~~~~~~~~~~liT 324 (377)
T cd07418 245 PGDVLWSDPSLTPGLSPNKQRGIGLLWGPDCTEEFLEKNNLKLIIRSHEGPDAREKRPGLAGMNKGYTVDHDVESGKLIT 324 (377)
T ss_pred ceeeEeeCCccCCCCCccCCCCCccccCHHHHHHHHHHcCCcEEEECCCCcccccccccchhhhCceEEeccCCCCcEEE
Confidence 469999999988888776 7999999999999999999999999999996 7899999887 89999
Q ss_pred EecCCCCC------cCCCCcEEEEEEcCC--CceeeEEeecCC
Q psy3331 164 IWSAPNYC------YRCGNIASILKFNSV--DNRTPALFQAVP 198 (214)
Q Consensus 164 VfSA~nY~------~~~~N~aAvl~i~~~--~~~~f~~f~~~~ 198 (214)
|||||||| +.++|+||++.++.+ ...+|.+|+++.
T Consensus 325 vFSa~nY~~~~~~~~~~~N~ga~~~~~~~~~~~~~~~~~~~~~ 367 (377)
T cd07418 325 LFSAPDYPQFQATEERYNNKGAYIILQPPDFSDPQFHTFEAVK 367 (377)
T ss_pred EecCCccccccccccccCcceEEEEEecCCCCCccceEeeccC
Confidence 99999999 678999999999665 479999999984
No 15
>cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain. Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most
Probab=100.00 E-value=3.1e-38 Score=282.91 Aligned_cols=145 Identities=34% Similarity=0.631 Sum_probs=133.9
Q ss_pred ccccchhHHHHHHHHHHHHHhcCCCccccCCCeeEeccccccc--------------------------cch--------
Q psy3331 52 LDNIVHRSLETLCDFVCSILNEESNVQHVSTPVTVCGDIHGQY--------------------------IYM-------- 97 (214)
Q Consensus 52 ~~~~~~~~l~~l~~~a~~il~~ep~ll~l~~pv~vvGDiHGq~--------------------------LFL-------- 97 (214)
+..++.+++.+||++|.++|.+||+++++++|+.|||||||+| +||
T Consensus 18 ~~~~~~~~i~~l~~~~~~il~~e~~~~~i~~~~~viGDIHG~~~~L~~ll~~~g~~~~~~~~~~~~~~~vfLGDyVDRGp 97 (311)
T cd07419 18 RFFFNWNEILELCDAAEDIFKQEPMVLRLRAPIKIFGDIHGQFGDLMRLFDEYGSPVTEAAGDIEYIDYLFLGDYVDRGS 97 (311)
T ss_pred ccCCCHHHHHHHHHHHHHHHHhCCCeEeeCCCEEEEEeccCCHHHHHHHHHHcCCCcccccCCCcCceEEEECCccCCCC
Confidence 4557889999999999999999999999999999999999999 122
Q ss_pred --------------------------------------------------------------------------------
Q psy3331 98 -------------------------------------------------------------------------------- 97 (214)
Q Consensus 98 -------------------------------------------------------------------------------- 97 (214)
T Consensus 98 ~s~evl~ll~~lk~~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~~~~~~~~~~~l~~~~~~~f~~LPl~avi~~~~l~v 177 (311)
T cd07419 98 NSLETICLLLALKVKYPNQIHLIRGNHEDRDINALFGFREECKERLGEDPNDGDSVWRRINRLFEWLPLAAIIEDKILCM 177 (311)
T ss_pred ChHHHHHHHHHhhhcCCCcEEEeccccchHHHHHHhcccHHHHHhcCccchhhHHHHHHHHHHHHhCchhheecccEEEE
Confidence
Q ss_pred ---------------------------hhhhhhhcCCCCC---CCCCccCC---CCCc--eEeCHHHHHHHHhhcCcceE
Q psy3331 98 ---------------------------GAFCDLVWSDPAE---VETWTVSP---RGAG--WLFGAKVTHEFIHINHLKLI 142 (214)
Q Consensus 98 ---------------------------gl~~DlLWSDP~~---~~g~~~s~---RG~g--~~FG~~~v~~Fl~~n~l~~I 142 (214)
++++|+|||||.+ ..+|.+|+ ||.| +.||++++++||++||+++|
T Consensus 178 HgGi~p~~~~l~~i~~i~r~~~~~~~~~~~~dllWsDP~~~~~~~~~~~~~~~~rg~g~~~~fg~~~~~~Fl~~n~l~~i 257 (311)
T cd07419 178 HGGIGRSINHVSEIEDLKRPLTMEFGEQVVMDLLWSDPTENDSVLGLRPNAIDPRGPGLIVKFGPDRVHRFLEENDLQMI 257 (311)
T ss_pred ccCCCCCCCcHHHHhhcCCCCCCCCCCcceeeeeccCccccccccccccCCCCCCCCCcceeECHHHHHHHHHHCCCeEE
Confidence 4678999999986 35788777 9998 79999999999999999999
Q ss_pred EeccccccccceEeeCCcEEEEecCCCCCcCCCCcEEEEEEcCCCceeeEEeec
Q psy3331 143 CRAHQLVHEGYKYMFDGNLVTIWSAPNYCYRCGNIASILKFNSVDNRTPALFQA 196 (214)
Q Consensus 143 iRaHq~v~~Gy~~~~~~~~iTVfSA~nY~~~~~N~aAvl~i~~~~~~~f~~f~~ 196 (214)
|||||++++||++.++++|+|||||||||+.++|.||++.|++++.++|++++|
T Consensus 258 iRgHe~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~~ai~~i~~~~~~~~~~~~~ 311 (311)
T cd07419 258 IRAHECVMDGFERFAQGKLITLFSATNYCGTAGNAGAILVLGRDLTIIPKLIHP 311 (311)
T ss_pred EEechhhhCCeEEeCCCeEEEEecCCcccCCCCceEEEEEECCCCcEeEEEeCC
Confidence 999999999999999999999999999999999999999999999999999986
No 16
>KOG0375|consensus
Probab=100.00 E-value=1.6e-37 Score=278.83 Aligned_cols=148 Identities=35% Similarity=0.646 Sum_probs=134.3
Q ss_pred cccchhHHHHHHHHHHHHHhcCCCccccCCCeeEeccccccc------------------cch-----------------
Q psy3331 53 DNIVHRSLETLCDFVCSILNEESNVQHVSTPVTVCGDIHGQY------------------IYM----------------- 97 (214)
Q Consensus 53 ~~~~~~~l~~l~~~a~~il~~ep~ll~l~~pv~vvGDiHGq~------------------LFL----------------- 97 (214)
+.++++....|+.++..+|.+|++++++++||+||||||||| |||
T Consensus 59 Grl~ee~alrIi~~~a~llr~Eknmi~v~APiTVCGDIHGQf~DLmKLFEVGG~PA~t~YLFLGDYVDRGyFSiECvlYL 138 (517)
T KOG0375|consen 59 GRLEEEQALRIINEGAALLRQEKNMIEVEAPITVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIECVLYL 138 (517)
T ss_pred cchhHHHHHHHHHHHHHHHhcCCceEeccCCeeEecccchHHHHHHHHHHccCCcccceeEeeccccccceeeeehHHHH
Confidence 556788889999999999999999999999999999999999 555
Q ss_pred --------------------------------------------------------------------------------
Q psy3331 98 -------------------------------------------------------------------------------- 97 (214)
Q Consensus 98 -------------------------------------------------------------------------------- 97 (214)
T Consensus 139 wsLKi~yp~tl~lLRGNHECrHLT~YFTFKqEc~iKYse~vYdaCmesFd~LPLAAlmNqQflCVHGGlSPEi~tl~DIr 218 (517)
T KOG0375|consen 139 WSLKINYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYDACMESFDCLPLAALMNQQFLCVHGGLSPEIHTLDDIR 218 (517)
T ss_pred HHHhcCCCCeEEEecCCcchhhhHhHhhHHHHHhHhccHHHHHHHHHHhccchHHHHhcCceEEecCCCCcccccHHHHH
Confidence
Q ss_pred -----------hhhhhhhcCCCCC-------CCCCc-cCCCCCceEeCHHHHHHHHhhcCcceEEeccccccccceEeeC
Q psy3331 98 -----------GAFCDLVWSDPAE-------VETWT-VSPRGAGWLFGAKVTHEFIHINHLKLICRAHQLVHEGYKYMFD 158 (214)
Q Consensus 98 -----------gl~~DlLWSDP~~-------~~g~~-~s~RG~g~~FG~~~v~~Fl~~n~l~~IiRaHq~v~~Gy~~~~~ 158 (214)
|++||||||||.+ .+.|. +|.||++|.|...++++||+.|||--||||||..+.||+.+.+
T Consensus 219 ~l~RF~EpPa~GpmCDLLWsDPlEdfgnek~~e~f~hNsvRGCSyfysy~A~C~FLq~nnLLSIiRAHEAQDaGYRMYrk 298 (517)
T KOG0375|consen 219 KLDRFKEPPAFGPMCDLLWSDPLEDFGNEKTSEHFTHNSVRGCSYFYSYPAVCEFLQNNNLLSIIRAHEAQDAGYRMYRK 298 (517)
T ss_pred hhhhccCCCccCcchhhhccChhhhccccccccccccCccccccceechHHHHHHHHhCCchhhhhhhhhhhhhhhhhhc
Confidence 9999999999984 22343 4589999999999999999999999999999999999998765
Q ss_pred C------cEEEEecCCCCCcCCCCcEEEEEEcCCCceeeEEeecCCCCC
Q psy3331 159 G------NLVTIWSAPNYCYRCGNIASILKFNSVDNRTPALFQAVPNEE 201 (214)
Q Consensus 159 ~------~~iTVfSA~nY~~~~~N~aAvl~i~~~~~~~f~~f~~~~~~~ 201 (214)
. .+|||||||||.+.++|+||||+. ++..++++||..+|++.
T Consensus 299 sqttGFPSLiTiFSAPNYLDvYnNKAAvLKY-EnNVMNIRQFncSPHPY 346 (517)
T KOG0375|consen 299 SQTTGFPSLITIFSAPNYLDVYNNKAAVLKY-ENNVMNIRQFNCSPHPY 346 (517)
T ss_pred ccccCCchheeeecCCchhhhhccHHHHhhh-hcccceeeccCCCCCCc
Confidence 4 489999999999999999999999 88899999999999764
No 17
>KOG0377|consensus
Probab=99.98 E-value=5.9e-33 Score=254.25 Aligned_cols=101 Identities=30% Similarity=0.516 Sum_probs=94.7
Q ss_pred hhhhhhhcCCCCCCCCCccC-CCCCceEeCHHHHHHHHhhcCcceEEeccccccccceEeeCCcEEEEecCCCCCcCCCC
Q psy3331 98 GAFCDLVWSDPAEVETWTVS-PRGAGWLFGAKVTHEFIHINHLKLICRAHQLVHEGYKYMFDGNLVTIWSAPNYCYRCGN 176 (214)
Q Consensus 98 gl~~DlLWSDP~~~~g~~~s-~RG~g~~FG~~~v~~Fl~~n~l~~IiRaHq~v~~Gy~~~~~~~~iTVfSA~nY~~~~~N 176 (214)
..+.|+|||||....|..|| -||.|.+||+|++.+||++.+++++||+|||.++||+|+++++|+|||||+||....+|
T Consensus 332 ~Qi~DImWSDP~~~~GC~pNt~RGgG~yFGpDvT~~~Lqk~~l~~liRSHECKpeGyEf~Hd~kvlTiFSASNYYe~GSN 411 (631)
T KOG0377|consen 332 QQIFDIMWSDPQATMGCVPNTLRGGGCYFGPDVTDNFLQKHRLSYLIRSHECKPEGYEFCHDNKVLTIFSASNYYEIGSN 411 (631)
T ss_pred HHHHHHHhcCcccccCCCcccccCCcceeCchHHHHHHHHhCceeeeeecccCCCcceeeeCCeEEEEEeccchheecCC
Confidence 67889999999987776666 69999999999999999999999999999999999999999999999999999988899
Q ss_pred cEEEEEEcCCCceeeEEeecCC
Q psy3331 177 IASILKFNSVDNRTPALFQAVP 198 (214)
Q Consensus 177 ~aAvl~i~~~~~~~f~~f~~~~ 198 (214)
+||.+++...+...|+||.+..
T Consensus 412 rGAYikl~~~~~PhfvQY~a~k 433 (631)
T KOG0377|consen 412 RGAYIKLGNQLTPHFVQYQAAK 433 (631)
T ss_pred CceEEEeCCCCCchHHHHHhhh
Confidence 9999999999999999999654
No 18
>KOG0376|consensus
Probab=99.96 E-value=3.6e-30 Score=238.32 Aligned_cols=167 Identities=28% Similarity=0.489 Sum_probs=147.2
Q ss_pred cccCCcchhhhhhhhhcCCCCCccccccchhHHHHHHHHHHHHHhcCCCccccCCCeeEeccccccc-----cch-----
Q psy3331 28 FVKGGTYYTALAKMKILNFPPHVKLDNIVHRSLETLCDFVCSILNEESNVQHVSTPVTVCGDIHGQY-----IYM----- 97 (214)
Q Consensus 28 ~~rGnh~~~~~~~~~~~~~e~~~~~~~~~~~~l~~l~~~a~~il~~ep~ll~l~~pv~vvGDiHGq~-----LFL----- 97 (214)
++|||||.+..++.|+|..+|+-++..-...-.. +.|.--|.--.|+..+.|+ ||+. .=|
T Consensus 278 l~rgn~Es~~m~~iy~f~~e~~~kyte~~~~~f~-------~~f~~LPl~~~i~~~~~~~---hgglf~~~~v~l~d~r~ 347 (476)
T KOG0376|consen 278 LLRGNHESDNMNKIYGFEGEVKAKYTEEMFNLFS-------EVFIWLPLAHLINNKVLVM---HGGLFSPDGVTLEDFRN 347 (476)
T ss_pred eccCCccchHHHHHhCCCcchhhhhHHHHHHhhh-------hhhccccchhhhcCceEEE---ecCcCCCCCccHHHHHh
Confidence 8999999999999999999999888764333222 5555556666677778774 9986 111
Q ss_pred ----------hhhhhhhcCCCCCCCCCccCCCCCceEeCHHHHHHHHhhcCcceEEeccccccccceEeeCCcEEEEecC
Q psy3331 98 ----------GAFCDLVWSDPAEVETWTVSPRGAGWLFGAKVTHEFIHINHLKLICRAHQLVHEGYKYMFDGNLVTIWSA 167 (214)
Q Consensus 98 ----------gl~~DlLWSDP~~~~g~~~s~RG~g~~FG~~~v~~Fl~~n~l~~IiRaHq~v~~Gy~~~~~~~~iTVfSA 167 (214)
|++||+|||||...+|..+|.||.|..||+|++++||+.|++++|||||++.+.||++.++|+|+|||||
T Consensus 348 i~r~~~~~~~~~~~~~lws~pq~~~g~s~S~r~~g~~fG~d~t~~f~~~n~l~~i~rshe~~d~gy~~eh~g~l~tvfsa 427 (476)
T KOG0376|consen 348 IDRFEQPPEEGLMCELLWSDPQPANGRSPSKRGVGLQFGPDVTERFLQDNNLDKIIRSHEVKDEGYEVEHSGKLITVFSA 427 (476)
T ss_pred hhhccCCcccccccccccCCCccccCCCccccCceeeeCCCchhhHHhhcchHHHhhccccCCCceeeecCCcEEEEecC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcCCCCcEEEEEEc-CCCceeeEEeecCCCCCCCC
Q psy3331 168 PNYCYRCGNIASILKFN-SVDNRTPALFQAVPNEERVI 204 (214)
Q Consensus 168 ~nY~~~~~N~aAvl~i~-~~~~~~f~~f~~~~~~~~~~ 204 (214)
||||...+|.||++.++ +++...+.+|+|+|+..-+.
T Consensus 428 pnycd~~~n~ga~i~~~~~~~~p~~~~~e~vp~~~~~~ 465 (476)
T KOG0376|consen 428 PNYCDQMGNKGAFIHLEPDDLTPNFYTFEAVPHPDVKP 465 (476)
T ss_pred cchhhhcCCcceEEEecCCCCccceeecccCCCCCCCC
Confidence 99999999999999998 77899999999999876543
No 19
>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain. The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate
Probab=99.46 E-value=7.9e-13 Score=111.28 Aligned_cols=148 Identities=30% Similarity=0.373 Sum_probs=107.0
Q ss_pred cccCCcchhhhhhhhhcCCCCCc--cccccchhHHHHHHHHHHHHHhcCCCccccCC-CeeEeccccccc---c--c---
Q psy3331 28 FVKGGTYYTALAKMKILNFPPHV--KLDNIVHRSLETLCDFVCSILNEESNVQHVST-PVTVCGDIHGQY---I--Y--- 96 (214)
Q Consensus 28 ~~rGnh~~~~~~~~~~~~~e~~~--~~~~~~~~~l~~l~~~a~~il~~ep~ll~l~~-pv~vvGDiHGq~---L--F--- 96 (214)
++|||||...+....++..+... ............+.....+.+.+-|....+.. .+.+ +||++ . .
T Consensus 60 ~l~GNHe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~---vHag~~~~~~~~~~~ 136 (225)
T cd00144 60 LLRGNHEDMLLNFLYGFYDEDEWIGGTLRLLKKLGEDLWEEFNDVFFYLPLAALIETKKVLC---VHGGLSPGLPLEEQI 136 (225)
T ss_pred EEccCchhhhhhhhcCCcchhhccchhHHHHHhhCHHHHHHHHHHHHhCcHheEeCCCeEEE---EeCCCCCccchHHhh
Confidence 79999999888766665443210 00111122223455666778888888888876 5555 49877 1 1
Q ss_pred -----hhhhhhhhcCCCCCCC-CCccCCCCCceEeCHHHHHHHHhhcCcceEEeccccccccceEeeCCcEEEEecCCCC
Q psy3331 97 -----MGAFCDLVWSDPAEVE-TWTVSPRGAGWLFGAKVTHEFIHINHLKLICRAHQLVHEGYKYMFDGNLVTIWSAPNY 170 (214)
Q Consensus 97 -----Lgl~~DlLWSDP~~~~-g~~~s~RG~g~~FG~~~v~~Fl~~n~l~~IiRaHq~v~~Gy~~~~~~~~iTVfSA~nY 170 (214)
-....+++|++|.... ....+.|+. |+++.+.|++.++.+.|||||+++..|+.....++++||+|++.|
T Consensus 137 ~~~~~~~~~~~~lw~r~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ii~GHt~~~~~~~~~~~~~~i~IDtg~~~ 212 (225)
T cd00144 137 KEEPEDQLPEDLLWSDPLELPGGFGSSRRGG----GPDAVEWFLKKNGLKLIVRGHTPVEEGYEFGHDGNLITIDSGCNY 212 (225)
T ss_pred hcCcccccceeeeecCCCCCCCCCcCCCCCC----CHHHHHHHHHHCCCeEEEEcCccccCccEEcCCCCEEEEecCCcc
Confidence 1347889999998633 333445555 999999999999999999999999999876678899999999999
Q ss_pred CcCCCCcEEEEE
Q psy3331 171 CYRCGNIASILK 182 (214)
Q Consensus 171 ~~~~~N~aAvl~ 182 (214)
++..+|..+++.
T Consensus 213 ~~~~~~~l~~~~ 224 (225)
T cd00144 213 CGGGGNKLAALV 224 (225)
T ss_pred cCCCCccEEEEe
Confidence 877778777664
No 20
>KOG0373|consensus
Probab=98.26 E-value=3e-07 Score=79.47 Aligned_cols=58 Identities=17% Similarity=0.244 Sum_probs=43.4
Q ss_pred cccCCcchhhhhhhhhcCCCCCccccccchhHHHHHHHHHHHHHhcCCCccccCCCeeEeccccccc
Q psy3331 28 FVKGGTYYTALAKMKILNFPPHVKLDNIVHRSLETLCDFVCSILNEESNVQHVSTPVTVCGDIHGQY 94 (214)
Q Consensus 28 ~~rGnh~~~~~~~~~~~~~e~~~~~~~~~~~~l~~l~~~a~~il~~ep~ll~l~~pv~vvGDiHGq~ 94 (214)
|+|||||.|+|+++|||++||+.||++-+ +++-|-++-+.|---. -|+..|. | +||++
T Consensus 109 LlRGNHEsRqitqVYGFydECq~KYGnan---~wkycckVFD~LtlaA---iID~~vL-C--VHGGL 166 (306)
T KOG0373|consen 109 LLRGNHESRQITQVYGFYDECQNKYGNAN---VWKYCCKVFDFLTLAA---IIDEKVL-C--VHGGL 166 (306)
T ss_pred EeeccchhhhhhhhhhhHHHHHhhcCCch---HHHHHHHHHhhhhHHH---HhcCcEE-E--EcCCC
Confidence 99999999999999999999999998864 5677777776652111 1233443 3 58888
No 21
>KOG0372|consensus
Probab=98.18 E-value=5.3e-07 Score=78.86 Aligned_cols=58 Identities=10% Similarity=0.155 Sum_probs=45.1
Q ss_pred cccCCcchhhhhhhhhcCCCCCccccccchhHHHHHHHHHHHHHhcCCCccccCCCeeEeccccccc
Q psy3331 28 FVKGGTYYTALAKMKILNFPPHVKLDNIVHRSLETLCDFVCSILNEESNVQHVSTPVTVCGDIHGQY 94 (214)
Q Consensus 28 ~~rGnh~~~~~~~~~~~~~e~~~~~~~~~~~~l~~l~~~a~~il~~ep~ll~l~~pv~vvGDiHGq~ 94 (214)
|+|||||.|+|+++||||+||..||++ ..+|+.|.++-+.|. .---|+..+.. +||++
T Consensus 106 LiRGNHEsRqitqvYGFY~EclrKYG~---~~vWr~c~eiFdyL~---l~aiid~kifC---VHGGl 163 (303)
T KOG0372|consen 106 LIRGNHESRQITQVYGFYDECLRKYGS---ANVWRYCTEIFDYLS---LAAIIDGKIFC---VHGGL 163 (303)
T ss_pred EeeccchhhhhhhhhhHHHHHHHHcCC---hHHHHHHHHHHHhhh---HhheecCcEEE---EcCCC
Confidence 899999999999999999999999994 467888877766653 22233555543 59998
No 22
>COG0639 ApaH Diadenosine tetraphosphatase and related serine/threonine protein phosphatases [Signal transduction mechanisms]
Probab=98.14 E-value=4.4e-06 Score=63.79 Aligned_cols=79 Identities=42% Similarity=0.661 Sum_probs=68.0
Q ss_pred CeeEeccccccccchhhhhhhhcCCCCC--CCCCccCCCCCceEeCHHHHHHHHhhcCcceEEeccccccccceEeeCCc
Q psy3331 83 PVTVCGDIHGQYIYMGAFCDLVWSDPAE--VETWTVSPRGAGWLFGAKVTHEFIHINHLKLICRAHQLVHEGYKYMFDGN 160 (214)
Q Consensus 83 pv~vvGDiHGq~LFLgl~~DlLWSDP~~--~~g~~~s~RG~g~~FG~~~v~~Fl~~n~l~~IiRaHq~v~~Gy~~~~~~~ 160 (214)
.+..+|+.|+ .+|+||.. ...|.+++||.+..| .+.+..|+..+....+.|+|+.+..++...+.+.
T Consensus 75 ~~~~~g~~~~----------~~~~~~~~~~~~~w~~~~~g~~~~~-~~~~~~f~~~~~~~~~~~~~~~~~~d~~~~~~~~ 143 (155)
T COG0639 75 EVPHAGHTHD----------LLWSDPDGGDRRIWNPGPRGVPRDG-GDVTAVFGIVHTPKLIERAHVLYDIDTGAVFGGG 143 (155)
T ss_pred cCCCcccccc----------ccCCCCCCCcccccccCCCCCCccc-cchhhHHhhhcccceEEEEeEEEecCceEEeCCC
Confidence 4556666666 59999985 689999999999888 8888899988888889999999999999888868
Q ss_pred EEEEecCCCCCc
Q psy3331 161 LVTIWSAPNYCY 172 (214)
Q Consensus 161 ~iTVfSA~nY~~ 172 (214)
.+|.|++++|+.
T Consensus 144 ~lt~~~~~~~~~ 155 (155)
T COG0639 144 LLTAFSAPNYCY 155 (155)
T ss_pred eeeEEecccccC
Confidence 999999999873
No 23
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain. This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal
Probab=97.76 E-value=4.3e-05 Score=64.93 Aligned_cols=122 Identities=16% Similarity=0.150 Sum_probs=72.8
Q ss_pred cccCCcchhhhhhhhhcCCCCCccccc---cchhHHHHHHHHHHHHHhcCCCccccCCCeeEeccccccccchhhhhhhh
Q psy3331 28 FVKGGTYYTALAKMKILNFPPHVKLDN---IVHRSLETLCDFVCSILNEESNVQHVSTPVTVCGDIHGQYIYMGAFCDLV 104 (214)
Q Consensus 28 ~~rGnh~~~~~~~~~~~~~e~~~~~~~---~~~~~l~~l~~~a~~il~~ep~ll~l~~pv~vvGDiHGq~LFLgl~~DlL 104 (214)
.++||||...+...+....+-...... .+.+++...-..-.+.|.+-|.++.++. +.+ +|| |+ +.+
T Consensus 72 ~l~GNHE~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~lP~~~~~~~-~~f---vHa-----g~--~~~ 140 (208)
T cd07425 72 FLLGNHELMNLCGDFRYVHPKYFNEFGGLAMRRRELFSPGGELGRWLRSKPVIVKVND-TLF---VHG-----GL--GPL 140 (208)
T ss_pred EeeCCCcHHHHcchhccCChhHHHHHHhhhhhHHHhcCCccHHHHHHHhCCeEEEECC-EEE---EeC-----Cc--HHH
Confidence 799999999886433222110000000 0111222222233677888888888765 333 498 44 666
Q ss_pred cCCCCCCCCCccCCCCCceEeCHHHHHHHHhhcCcceEEeccccccccceEeeCCcEEEEecC
Q psy3331 105 WSDPAEVETWTVSPRGAGWLFGAKVTHEFIHINHLKLICRAHQLVHEGYKYMFDGNLVTIWSA 167 (214)
Q Consensus 105 WSDP~~~~g~~~s~RG~g~~FG~~~v~~Fl~~n~l~~IiRaHq~v~~Gy~~~~~~~~iTVfSA 167 (214)
|+-.--.. ..+.+ . +...++++++.++.+.|++||..++.|....+++++++|-+.
T Consensus 141 w~r~y~~~--~~~~~-~----~~~~~~~~l~~~~~~~iv~GHTh~~~~~~~~~~g~~i~ID~g 196 (208)
T cd07425 141 WYRGYSKE--TSDKE-C----AAAHLDKVLERLGAKRMVVGHTPQEGGIVTFCGGKVIRIDVG 196 (208)
T ss_pred HhhHhhhh--hhhcc-c----hHHHHHHHHHHcCCCeEEEcCeeeecCceEEECCEEEEEeCC
Confidence 64221000 00001 0 125788999999999999999999988866789999999763
No 24
>cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain. RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all
Probab=97.56 E-value=5.6e-05 Score=68.63 Aligned_cols=60 Identities=8% Similarity=0.024 Sum_probs=47.7
Q ss_pred cccCCcchhhhhhhhhcCCCCCccccccchhHHHHHHHHHHHHHhcCCCccccCCCeeEeccccccc
Q psy3331 28 FVKGGTYYTALAKMKILNFPPHVKLDNIVHRSLETLCDFVCSILNEESNVQHVSTPVTVCGDIHGQY 94 (214)
Q Consensus 28 ~~rGnh~~~~~~~~~~~~~e~~~~~~~~~~~~l~~l~~~a~~il~~ep~ll~l~~pv~vvGDiHGq~ 94 (214)
++|||||.+.++..|||+.||..++..- -..+.....+.|..-|...-|+..+.. +||+.
T Consensus 115 llRGNHE~~~~~~~yGf~~e~~~~y~~~----~~~l~~~~~~~F~~LPlaaii~~~i~c---vHGGi 174 (321)
T cd07420 115 LNRGNHEDHIMNLRYGFTKEVMSKYKLH----GKKILRLLEDVFSWLPLATIIDNKILV---VHGGI 174 (321)
T ss_pred EecCchhhhhhhhhcChHHHHHHHhCcc----HHHHHHHHHHHHHhCCceEEEcCCEEE---EeCCC
Confidence 8999999999999999999999998642 224556677778888888877777765 59953
No 25
>KOG0371|consensus
Probab=97.40 E-value=7.9e-05 Score=65.85 Aligned_cols=28 Identities=11% Similarity=0.026 Sum_probs=26.7
Q ss_pred cccCCcchhhhhhhhhcCCCCCcccccc
Q psy3331 28 FVKGGTYYTALAKMKILNFPPHVKLDNI 55 (214)
Q Consensus 28 ~~rGnh~~~~~~~~~~~~~e~~~~~~~~ 55 (214)
+||||||.|+++++|+|++||..|+++.
T Consensus 123 ilrGNHEsrqitqvygfydeclRkyg~a 150 (319)
T KOG0371|consen 123 ILRGNHESRQITQVYGFYDECLRKYGNA 150 (319)
T ss_pred EecCchHHHHHHHHHhhHHHHHhhcccc
Confidence 9999999999999999999999999765
No 26
>KOG0375|consensus
Probab=97.08 E-value=0.00024 Score=65.44 Aligned_cols=27 Identities=11% Similarity=0.194 Sum_probs=26.0
Q ss_pred cccCCcchhhhhhhhhcCCCCCccccc
Q psy3331 28 FVKGGTYYTALAKMKILNFPPHVKLDN 54 (214)
Q Consensus 28 ~~rGnh~~~~~~~~~~~~~e~~~~~~~ 54 (214)
|||||||+|+++..|.|+.||..||..
T Consensus 151 lLRGNHECrHLT~YFTFKqEc~iKYse 177 (517)
T KOG0375|consen 151 LLRGNHECRHLTEYFTFKQECKIKYSE 177 (517)
T ss_pred EecCCcchhhhHhHhhHHHHHhHhccH
Confidence 999999999999999999999999976
No 27
>KOG0374|consensus
Probab=97.00 E-value=0.00027 Score=64.48 Aligned_cols=58 Identities=9% Similarity=0.104 Sum_probs=40.7
Q ss_pred cccCCcchhhhhhhhhcCCCCCccccccchhHHHHHHHHHHHHHhcCCCccccCCCeeEeccccccc
Q psy3331 28 FVKGGTYYTALAKMKILNFPPHVKLDNIVHRSLETLCDFVCSILNEESNVQHVSTPVTVCGDIHGQY 94 (214)
Q Consensus 28 ~~rGnh~~~~~~~~~~~~~e~~~~~~~~~~~~l~~l~~~a~~il~~ep~ll~l~~pv~vvGDiHGq~ 94 (214)
++|||||+.+++..|||++||..++.. . .+-....+.|..-|..--|...|.. .||+.
T Consensus 123 lLRGNHE~~~in~~yGFydE~~rr~~~---~---~~w~~F~~~f~~mp~~a~i~~kI~C---mhGGl 180 (331)
T KOG0374|consen 123 LLRGNHECASINRIYGFYDECKRRYGE---I---KLWKAFNDAFNCLPLAALIDGKILC---MHGGL 180 (331)
T ss_pred EeccccccccccceeeeHHHHHHhcch---H---HHHHHHHHHHhhCchhheecceEEE---ecCCC
Confidence 899999999999999999999966664 2 2224446666666655555555532 46665
No 28
>cd07418 MPP_PP7 PP7, metallophosphatase domain. PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-,
Probab=96.92 E-value=0.0011 Score=61.51 Aligned_cols=59 Identities=10% Similarity=0.033 Sum_probs=48.3
Q ss_pred cccCCcchhhhhhhhhcCCCCCccccccchhHHHHHHHHHHHHHhcCCCccccCCCeeEecccccc
Q psy3331 28 FVKGGTYYTALAKMKILNFPPHVKLDNIVHRSLETLCDFVCSILNEESNVQHVSTPVTVCGDIHGQ 93 (214)
Q Consensus 28 ~~rGnh~~~~~~~~~~~~~e~~~~~~~~~~~~l~~l~~~a~~il~~ep~ll~l~~pv~vvGDiHGq 93 (214)
++|||||.+.++..|||..||..++..- -..+.+...+.|..-|....++..+.+| ||+
T Consensus 130 lLRGNHE~~~i~~~~Gf~~E~~~~y~~~----~~~l~~~~~~~f~~LPlaavI~~~i~cv---HGG 188 (377)
T cd07418 130 LLRGNHESKFCTSMYGFEQEVLTKYGDK----GKHVYRKCLGCFEGLPLASIIAGRVYTA---HGG 188 (377)
T ss_pred EEeeecccccchhhcccchhhhhhcCch----HHHHHHHHHHHHHhCCcEEEECCCEEEE---CCC
Confidence 8999999999999999999998887632 2356677888999999888787777665 994
No 29
>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain. PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2
Probab=96.81 E-value=0.00092 Score=59.73 Aligned_cols=58 Identities=9% Similarity=0.158 Sum_probs=42.2
Q ss_pred cccCCcchhhhhhhhhcCCCCCccccccchhHHHHHHHHHHHHHhcCCCccccCCCeeEeccccccc
Q psy3331 28 FVKGGTYYTALAKMKILNFPPHVKLDNIVHRSLETLCDFVCSILNEESNVQHVSTPVTVCGDIHGQY 94 (214)
Q Consensus 28 ~~rGnh~~~~~~~~~~~~~e~~~~~~~~~~~~l~~l~~~a~~il~~ep~ll~l~~pv~vvGDiHGq~ 94 (214)
++|||||.+.++..|+|..||..++.. ..+.....+.|..-|-..-++.-+.. +||+.
T Consensus 105 llrGNHE~~~~~~~ygf~~e~~~~y~~------~~l~~~~~~~f~~lPlaaii~~~i~c---vHgGi 162 (285)
T cd07415 105 LLRGNHESRQITQVYGFYDECLRKYGN------ANVWKYCTDLFDYLPLAALIDNQIFC---VHGGL 162 (285)
T ss_pred EEecccchHhhhhhcchhHHHHHhcCc------hHHHHHHHHHHHHhHHHhEeCCeEEE---EcCCC
Confidence 899999999999999999999988864 23444555666655655555555444 57777
No 30
>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain. Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel
Probab=96.81 E-value=0.0017 Score=58.92 Aligned_cols=57 Identities=18% Similarity=0.219 Sum_probs=41.9
Q ss_pred cccCCcchhhhhhhhhcCCCCCccccccchhHHHHHHHHHHHHHhcCCCccccCCCeeEeccccccc
Q psy3331 28 FVKGGTYYTALAKMKILNFPPHVKLDNIVHRSLETLCDFVCSILNEESNVQHVSTPVTVCGDIHGQY 94 (214)
Q Consensus 28 ~~rGnh~~~~~~~~~~~~~e~~~~~~~~~~~~l~~l~~~a~~il~~ep~ll~l~~pv~vvGDiHGq~ 94 (214)
++|||||.+.++..|+|..||..++.. .+.....+.|..-|-...++..+.+| ||++
T Consensus 124 lLRGNHE~~~~~~~~gf~~e~~~k~~~-------~l~~~~~~~f~~LPlaaii~~~~~~v---HgGi 180 (316)
T cd07417 124 LNRGNHETDNMNKMYGFEGEVKAKYNE-------QMFDLFSEVFNWLPLAHLINGKVLVV---HGGL 180 (316)
T ss_pred EEeeccchHHHHHHhhhcchhhhcccH-------HHHHHHHHHHHhchHhheeCCeEEEE---cccc
Confidence 799999999999999999999988742 23444556666667666666555554 7765
No 31
>PTZ00239 serine/threonine protein phosphatase 2A; Provisional
Probab=96.76 E-value=0.00084 Score=60.54 Aligned_cols=58 Identities=9% Similarity=0.076 Sum_probs=43.7
Q ss_pred cccCCcchhhhhhhhhcCCCCCccccccchhHHHHHHHHHHHHHhcCCCccccCCCeeEeccccccc
Q psy3331 28 FVKGGTYYTALAKMKILNFPPHVKLDNIVHRSLETLCDFVCSILNEESNVQHVSTPVTVCGDIHGQY 94 (214)
Q Consensus 28 ~~rGnh~~~~~~~~~~~~~e~~~~~~~~~~~~l~~l~~~a~~il~~ep~ll~l~~pv~vvGDiHGq~ 94 (214)
++|||||.+.++..|||..||..++... .+.....+.|..-|-..-++..+.. +||++
T Consensus 106 llrGNHE~~~~~~~~gf~~e~~~ky~~~------~~~~~~~~~f~~LPlaaii~~~i~c---vHgGi 163 (303)
T PTZ00239 106 LLRGNHESRQCTQVYGFYEEILRKYGNS------NPWRLFMDVFDCLPLAALIEGQILC---VHGGL 163 (303)
T ss_pred EEecccchHHHhhhcChHHHHHHHhcCh------hHHHHHHHHHHhCchheEEcCeEEE---EcCcc
Confidence 8999999999999999999999888642 2344556677777766656655544 58887
No 32
>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain. Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members.
Probab=96.64 E-value=0.0021 Score=56.90 Aligned_cols=57 Identities=7% Similarity=0.082 Sum_probs=44.1
Q ss_pred cccCCcchhhhhhhhhcCCCCCccccccchhHHHHHHHHHHHHHhcCCCccccCCCeeEeccccccc
Q psy3331 28 FVKGGTYYTALAKMKILNFPPHVKLDNIVHRSLETLCDFVCSILNEESNVQHVSTPVTVCGDIHGQY 94 (214)
Q Consensus 28 ~~rGnh~~~~~~~~~~~~~e~~~~~~~~~~~~l~~l~~~a~~il~~ep~ll~l~~pv~vvGDiHGq~ 94 (214)
++|||||.+.++..|+|+.||..++.. ++.+...+.|..-|...-++..+.. +||+.
T Consensus 91 llrGNHE~~~~~~~~gf~~e~~~~~~~-------~l~~~~~~~f~~LPl~aii~~~~~~---vHgGi 147 (271)
T smart00156 91 LLRGNHESRSMNEIYGFYDECKRKYGE-------EIYEKFQEAFSWLPLAALIDNKILC---MHGGL 147 (271)
T ss_pred EEeccccHHHHHHhccchhhhhhhcCH-------HHHHHHHHHHhhChhheEEcCeEEE---EecCC
Confidence 899999999999999999999988742 4556677777777776656555544 58887
No 33
>PTZ00480 serine/threonine-protein phosphatase; Provisional
Probab=96.60 E-value=0.002 Score=58.61 Aligned_cols=57 Identities=9% Similarity=0.114 Sum_probs=44.1
Q ss_pred cccCCcchhhhhhhhhcCCCCCccccccchhHHHHHHHHHHHHHhcCCCccccCCCeeEeccccccc
Q psy3331 28 FVKGGTYYTALAKMKILNFPPHVKLDNIVHRSLETLCDFVCSILNEESNVQHVSTPVTVCGDIHGQY 94 (214)
Q Consensus 28 ~~rGnh~~~~~~~~~~~~~e~~~~~~~~~~~~l~~l~~~a~~il~~ep~ll~l~~pv~vvGDiHGq~ 94 (214)
++|||||.+.++..|||+.||..++.. .+.....+.|..-|...-|+..+.. +||+.
T Consensus 122 llRGNHE~~~~~~~ygF~~e~~~~y~~-------~l~~~~~~~F~~LPlaAiI~~~i~c---vHGGI 178 (320)
T PTZ00480 122 LLRGNHECASINRIYGFYDECKRRYTI-------KLWKTFTDCFNCLPVAALIDEKILC---MHGGL 178 (320)
T ss_pred EEecccchhhhhhhcchHHHHHhhcCH-------HHHHHHHHHHHhccHhheecCcEEE---EcCCc
Confidence 899999999999999999999988742 3555666777776766666666654 58887
No 34
>cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain. PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg
Probab=96.58 E-value=0.0018 Score=58.15 Aligned_cols=57 Identities=9% Similarity=0.120 Sum_probs=43.8
Q ss_pred cccCCcchhhhhhhhhcCCCCCccccccchhHHHHHHHHHHHHHhcCCCccccCCCeeEeccccccc
Q psy3331 28 FVKGGTYYTALAKMKILNFPPHVKLDNIVHRSLETLCDFVCSILNEESNVQHVSTPVTVCGDIHGQY 94 (214)
Q Consensus 28 ~~rGnh~~~~~~~~~~~~~e~~~~~~~~~~~~l~~l~~~a~~il~~ep~ll~l~~pv~vvGDiHGq~ 94 (214)
++|||||.+.++..|+|..||..++.. .+.....+.|..-|...-+...+.+ +||++
T Consensus 113 llrGNHE~~~~~~~~gf~~e~~~~y~~-------~l~~~~~~~f~~lPlaa~i~~~i~c---vHgGi 169 (293)
T cd07414 113 LLRGNHECASINRIYGFYDECKRRYNI-------KLWKTFTDCFNCLPVAAIIDEKIFC---MHGGL 169 (293)
T ss_pred EEecccchhhHhhhcchhhHHHHhhhH-------HHHHHHHHHHHHhHHHHhhCCcEEE---EccCC
Confidence 899999999999999999999887642 3445556667777777667766655 48888
No 35
>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional
Probab=96.57 E-value=0.0017 Score=58.24 Aligned_cols=57 Identities=14% Similarity=0.184 Sum_probs=45.3
Q ss_pred cccCCcchhhhhhhhhcCCCCCccccccchhHHHHHHHHHHHHHhcCCCccccCCCeeEeccccccc
Q psy3331 28 FVKGGTYYTALAKMKILNFPPHVKLDNIVHRSLETLCDFVCSILNEESNVQHVSTPVTVCGDIHGQY 94 (214)
Q Consensus 28 ~~rGnh~~~~~~~~~~~~~e~~~~~~~~~~~~l~~l~~~a~~il~~ep~ll~l~~pv~vvGDiHGq~ 94 (214)
++|||||.+.++..|+|+.||..++. ..+.....+.|..-|...-++..+.. +||++
T Consensus 115 llrGNHE~~~~~~~~gf~~e~~~~y~-------~~l~~~~~~~f~~lPlaaii~~~il~---vHgGi 171 (294)
T PTZ00244 115 LLRGNHECASINKMYGFFDDVKRRYN-------IKLFKAFTDVFNTMPVCCVISEKIIC---MHGGL 171 (294)
T ss_pred EEecccchHhHhhccChHHHHHHHhh-------HHHHHHHHHHHHhCchheEecCeeEE---EcCCC
Confidence 89999999999999999999987764 24566677788887877766666654 58888
No 36
>cd07416 MPP_PP2B PP2B, metallophosphatase domain. PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G
Probab=96.53 E-value=0.0026 Score=57.34 Aligned_cols=57 Identities=12% Similarity=0.177 Sum_probs=43.6
Q ss_pred cccCCcchhhhhhhhhcCCCCCccccccchhHHHHHHHHHHHHHhcCCCccccCCCeeEeccccccc
Q psy3331 28 FVKGGTYYTALAKMKILNFPPHVKLDNIVHRSLETLCDFVCSILNEESNVQHVSTPVTVCGDIHGQY 94 (214)
Q Consensus 28 ~~rGnh~~~~~~~~~~~~~e~~~~~~~~~~~~l~~l~~~a~~il~~ep~ll~l~~pv~vvGDiHGq~ 94 (214)
++|||||.+.++..|+|..||..++. ..+.....+.|..-|...-++..+.. +||++
T Consensus 106 lLRGNHE~~~l~~~~gf~~e~~~~y~-------~~l~~~~~~~f~~LPlaaii~~~i~~---vHGGi 162 (305)
T cd07416 106 LLRGNHECRHLTEYFTFKQECKIKYS-------ERVYDACMEAFDCLPLAALMNQQFLC---VHGGL 162 (305)
T ss_pred EEeCCCcHHHHHHhhCchhHHHHhcc-------HHHHHHHHHHHhhccceeEEcCCEEE---EcCCC
Confidence 89999999999999999999987762 13446677778777766666665544 48887
No 37
>cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain. Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most
Probab=96.52 E-value=0.003 Score=57.06 Aligned_cols=63 Identities=6% Similarity=0.052 Sum_probs=44.2
Q ss_pred cccCCcchhhhhhhhhcCCCCCccccccchhHHHHHHHHHHHHHhcCCCccccCCCeeEeccccccc
Q psy3331 28 FVKGGTYYTALAKMKILNFPPHVKLDNIVHRSLETLCDFVCSILNEESNVQHVSTPVTVCGDIHGQY 94 (214)
Q Consensus 28 ~~rGnh~~~~~~~~~~~~~e~~~~~~~~~~~~l~~l~~~a~~il~~ep~ll~l~~pv~vvGDiHGq~ 94 (214)
++|||||.+.++..|+|..+|..++..... +-..+.....+.|..-|....++.-+.+| ||+.
T Consensus 119 lLRGNHE~~~l~~~~gf~~e~~~~~~~~~~-~~~~l~~~~~~~f~~LPl~avi~~~~l~v---HgGi 181 (311)
T cd07419 119 LIRGNHEDRDINALFGFREECKERLGEDPN-DGDSVWRRINRLFEWLPLAAIIEDKILCM---HGGI 181 (311)
T ss_pred EeccccchHHHHHHhcccHHHHHhcCccch-hhHHHHHHHHHHHHhCchhheecccEEEE---ccCC
Confidence 799999999999999999999988865321 11334445555666667655555555554 8877
No 38
>KOG0377|consensus
Probab=94.81 E-value=0.013 Score=55.47 Aligned_cols=66 Identities=11% Similarity=0.028 Sum_probs=51.9
Q ss_pred CcccccccccccCCcchhhhhhhhhcCCCCCccccccchhHHHHHHHHHHHHHhcCCCccccCCCeeEeccccccc
Q psy3331 19 PENELKSKKFVKGGTYYTALAKMKILNFPPHVKLDNIVHRSLETLCDFVCSILNEESNVQHVSTPVTVCGDIHGQY 94 (214)
Q Consensus 19 ~e~~~~~~~~~rGnh~~~~~~~~~~~~~e~~~~~~~~~~~~l~~l~~~a~~il~~ep~ll~l~~pv~vvGDiHGq~ 94 (214)
-++++. |.|||||.+-.|-||||-.|..+||..... .|+.-..+++.--|.-.-|++.|.|+ ||++
T Consensus 223 ~P~~~~---LNRGNHED~mmNlRYGF~kEv~~KYk~~~k----~Ilr~leevy~WLPi~tiid~~ilvv---HGGi 288 (631)
T KOG0377|consen 223 YPNAVH---LNRGNHEDHMMNLRYGFIKEVESKYKRHGK----RILRFLEEVYRWLPIGTIIDSRILVV---HGGI 288 (631)
T ss_pred Cchhhh---ccCCchHHHHHHHHHhHHHHHHHHhhhccc----HHHHHHHHHHHhcchhhhcccceEEE---ecCc
Confidence 334444 899999999999999999999999987654 34444556777778777888999884 9965
No 39
>KOG0376|consensus
Probab=94.47 E-value=0.038 Score=52.56 Aligned_cols=44 Identities=30% Similarity=0.575 Sum_probs=35.2
Q ss_pred HHHHHHHHHHhcCCCccccCCC----eeEeccccccccchhhhhhhhc
Q psy3331 62 TLCDFVCSILNEESNVQHVSTP----VTVCGDIHGQYIYMGAFCDLVW 105 (214)
Q Consensus 62 ~l~~~a~~il~~ep~ll~l~~p----v~vvGDiHGq~LFLgl~~DlLW 105 (214)
+|+..+..++..+|.++++..| ++||||.||||.=+--..+++|
T Consensus 190 ~i~~~~~~~~~~l~~~ve~~~~~d~~~sv~gd~hGqfydl~nif~l~g 237 (476)
T KOG0376|consen 190 SILDLAKTILRKLPSLVEISVPGDVKISVCGDTHGQFYDLLNIFELNG 237 (476)
T ss_pred eeHHHHhhHHhcCCcceEeecCCCceEEecCCccccccchhhhHhhcC
Confidence 8999999999999999999887 7999999999822222234555
No 40
>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional
Probab=93.01 E-value=0.093 Score=44.60 Aligned_cols=61 Identities=16% Similarity=0.263 Sum_probs=32.9
Q ss_pred CeeEeccccccc-cchhhhhhhhcCCCCCCCCCc---cCCCCCceEeCHHHHHHHHhhcCcceEEecccc
Q psy3331 83 PVTVCGDIHGQY-IYMGAFCDLVWSDPAEVETWT---VSPRGAGWLFGAKVTHEFIHINHLKLICRAHQL 148 (214)
Q Consensus 83 pv~vvGDiHGq~-LFLgl~~DlLWSDP~~~~g~~---~s~RG~g~~FG~~~v~~Fl~~n~l~~IiRaHq~ 148 (214)
++.|+|||||++ .|..++.++-++ |....-+. .=.||. ....+-+++.+.++..+.-.||.
T Consensus 18 ri~vigDIHG~~~~L~~lL~~i~~~-~~~D~li~lGDlvDrGp----~s~~vl~~l~~~~~~~v~GNHE~ 82 (218)
T PRK11439 18 HIWLVGDIHGCFEQLMRKLRHCRFD-PWRDLLISVGDLIDRGP----QSLRCLQLLEEHWVRAVRGNHEQ 82 (218)
T ss_pred eEEEEEcccCCHHHHHHHHHhcCCC-cccCEEEEcCcccCCCc----CHHHHHHHHHcCCceEeeCchHH
Confidence 789999999999 555555554332 21100000 001332 12234456666677777778874
No 41
>PF08321 PPP5: PPP5 TPR repeat region; InterPro: IPR013235 This domain is specific to the PPP5 subfamily of serine/threonine phosphatases.; GO: 0004722 protein serine/threonine phosphatase activity, 0046872 metal ion binding; PDB: 3ICF_B 3H60_B 3H63_A 3H66_A 3H62_B 1A17_A 1S95_B 3H69_A 3H68_D 3H64_D ....
Probab=92.55 E-value=0.11 Score=39.23 Aligned_cols=39 Identities=10% Similarity=0.080 Sum_probs=30.5
Q ss_pred HHHHHHHHHhCCCCCcccccccccccCCcchhhhhhhhhcCCCCCccccccchhHHHHHHHHHHHHHhcCCCcccc
Q psy3331 5 LDEWVEIAQQCKYLPENELKSKKFVKGGTYYTALAKMKILNFPPHVKLDNIVHRSLETLCDFVCSILNEESNVQHV 80 (214)
Q Consensus 5 ~~~~~~~~~~~~~~~e~~~~~~~~~rGnh~~~~~~~~~~~~~e~~~~~~~~~~~~l~~l~~~a~~il~~ep~ll~l 80 (214)
++++|+..++++.|+..-+. .|+.++.++|.++|+|++|
T Consensus 57 v~~mie~FK~~K~Lhkkyv~-------------------------------------~Il~~~~~llk~~PslVeI 95 (95)
T PF08321_consen 57 VKAMIEWFKNQKKLHKKYVY-------------------------------------QILLEAKKLLKQLPSLVEI 95 (95)
T ss_dssp HHHHHHHHHCT----HHHHH-------------------------------------HHHHHHHHHHHTS-SEEEE
T ss_pred HHHHHHHHHhCCCccHHHHH-------------------------------------HHHHHHHHHHHhCcCccCC
Confidence 67888888888888888888 9999999999999999875
No 42
>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional
Probab=90.80 E-value=1.9 Score=37.33 Aligned_cols=64 Identities=8% Similarity=0.090 Sum_probs=33.9
Q ss_pred cccCCcchhhhhhhhhcCC-------CCCccccccchhHHHHHHHHHHHHHhcCCCccccCCC-eeEeccccccc
Q psy3331 28 FVKGGTYYTALAKMKILNF-------PPHVKLDNIVHRSLETLCDFVCSILNEESNVQHVSTP-VTVCGDIHGQY 94 (214)
Q Consensus 28 ~~rGnh~~~~~~~~~~~~~-------e~~~~~~~~~~~~l~~l~~~a~~il~~ep~ll~l~~p-v~vvGDiHGq~ 94 (214)
++|||||...+.-..+-.. +....+.....++-..+.+...+.+.+-|....+... +++ +||++
T Consensus 71 ~l~GNHE~~~l~~~~~~~~~~~~gg~~tl~~~~~~~~~~~~~~~~~~~~~~~~lPl~~~~~~~~~~~---vHAG~ 142 (245)
T PRK13625 71 YVPGNHCNKLYRFFLGRNVTIAHGLETTVAEYEALPSHKQNMIKEKFITLYEQAPLYHILDEGRLVV---AHAGI 142 (245)
T ss_pred EEeCccHHHHHHHHhCCCccccchhHhHHHHHhccChhhHHHHHHHHHHHHHhCCceEEEeCCCEEE---EECCC
Confidence 7999999766543221110 0000111122223344666777888888877766443 444 48854
No 43
>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain. Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol
Probab=90.22 E-value=0.26 Score=44.70 Aligned_cols=13 Identities=46% Similarity=0.675 Sum_probs=11.4
Q ss_pred CCeeEeccccccc
Q psy3331 82 TPVTVCGDIHGQY 94 (214)
Q Consensus 82 ~pv~vvGDiHGq~ 94 (214)
..+.++|||||++
T Consensus 2 ~~iyaIGDIHG~~ 14 (304)
T cd07421 2 RVVICVGDIHGYI 14 (304)
T ss_pred ceEEEEEeccCCH
Confidence 3688999999998
No 44
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional
Probab=89.03 E-value=0.48 Score=40.36 Aligned_cols=62 Identities=18% Similarity=0.265 Sum_probs=31.2
Q ss_pred CCeeEeccccccc-cchhhhhhhhcCCCCC---CCCCccCCCCCceEeCHHHHHHHHhhcCcceEEecccc
Q psy3331 82 TPVTVCGDIHGQY-IYMGAFCDLVWSDPAE---VETWTVSPRGAGWLFGAKVTHEFIHINHLKLICRAHQL 148 (214)
Q Consensus 82 ~pv~vvGDiHGq~-LFLgl~~DlLWSDP~~---~~g~~~s~RG~g~~FG~~~v~~Fl~~n~l~~IiRaHq~ 148 (214)
.++.|+|||||++ .+..++.++-++...+ .-|- .-.||.. ...+-++|++.++..+.-.||.
T Consensus 15 ~ri~visDiHg~~~~l~~~l~~~~~~~~~d~l~~lGD-~vdrG~~----~~~~l~~l~~~~~~~v~GNHE~ 80 (218)
T PRK09968 15 RHIWVVGDIHGEYQLLQSRLHQLSFCPETDLLISVGD-NIDRGPE----SLNVLRLLNQPWFISVKGNHEA 80 (218)
T ss_pred CeEEEEEeccCCHHHHHHHHHhcCCCCCCCEEEECCC-CcCCCcC----HHHHHHHHhhCCcEEEECchHH
Confidence 3899999999998 3333333432211111 0010 0013321 2233356666677666668875
No 45
>PRK00166 apaH diadenosine tetraphosphatase; Reviewed
Probab=87.60 E-value=0.57 Score=41.67 Aligned_cols=60 Identities=17% Similarity=0.216 Sum_probs=29.2
Q ss_pred eeEeccccccc-cchhhhhhhhcCCCCC---CCCCccCCCCCceEeCHHHHHHHHhhc--CcceEEecccc
Q psy3331 84 VTVCGDIHGQY-IYMGAFCDLVWSDPAE---VETWTVSPRGAGWLFGAKVTHEFIHIN--HLKLICRAHQL 148 (214)
Q Consensus 84 v~vvGDiHGq~-LFLgl~~DlLWSDP~~---~~g~~~s~RG~g~~FG~~~v~~Fl~~n--~l~~IiRaHq~ 148 (214)
+.|+|||||+| -|..++.++=++...+ .-|- .-.||.. +..+-+++.+. ++.+|.-.|+.
T Consensus 3 ~~vIGDIHG~~~~l~~ll~~~~~~~~~D~li~lGD-lVdrGp~----s~~vl~~l~~l~~~~~~VlGNHD~ 68 (275)
T PRK00166 3 TYAIGDIQGCYDELQRLLEKIDFDPAKDTLWLVGD-LVNRGPD----SLEVLRFVKSLGDSAVTVLGNHDL 68 (275)
T ss_pred EEEEEccCCCHHHHHHHHHhcCCCCCCCEEEEeCC-ccCCCcC----HHHHHHHHHhcCCCeEEEecChhH
Confidence 67999999999 3333343332221111 0010 0013321 23344555554 36667678886
No 46
>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain. ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa
Probab=86.51 E-value=0.63 Score=41.04 Aligned_cols=61 Identities=20% Similarity=0.229 Sum_probs=29.7
Q ss_pred eeEeccccccc-cchhhhhhhhcCCCCC---CCCCccCCCCCceEeCHHHHHHHHhhc--CcceEEeccccc
Q psy3331 84 VTVCGDIHGQY-IYMGAFCDLVWSDPAE---VETWTVSPRGAGWLFGAKVTHEFIHIN--HLKLICRAHQLV 149 (214)
Q Consensus 84 v~vvGDiHGq~-LFLgl~~DlLWSDP~~---~~g~~~s~RG~g~~FG~~~v~~Fl~~n--~l~~IiRaHq~v 149 (214)
+.|+|||||.| -|..++.++=+..+.+ .-|-- =.||.. ...+-+++.+. ++.+|.-.|+..
T Consensus 1 ~yvIGDIHG~~~~L~~LL~~i~~~~~~D~Li~lGDl-VdRGp~----s~evl~~l~~l~~~v~~VlGNHD~~ 67 (257)
T cd07422 1 TYAIGDIQGCYDELQRLLEKINFDPAKDRLWLVGDL-VNRGPD----SLETLRFVKSLGDSAKTVLGNHDLH 67 (257)
T ss_pred CEEEECCCCCHHHHHHHHHhcCCCCCCCEEEEecCc-CCCCcC----HHHHHHHHHhcCCCeEEEcCCchHH
Confidence 36899999998 3333444433321111 00100 013321 22344566664 466666678764
No 47
>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain. The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate
Probab=86.51 E-value=0.53 Score=39.20 Aligned_cols=21 Identities=29% Similarity=0.403 Sum_probs=13.5
Q ss_pred eEeccccccc-cchhhhhhhhc
Q psy3331 85 TVCGDIHGQY-IYMGAFCDLVW 105 (214)
Q Consensus 85 ~vvGDiHGq~-LFLgl~~DlLW 105 (214)
.|+|||||++ .|..++.++-+
T Consensus 1 ~~igDiHg~~~~l~~~l~~~~~ 22 (225)
T cd00144 1 YVIGDIHGCLDDLLRLLEKIGF 22 (225)
T ss_pred CEEeCCCCCHHHHHHHHHHhCC
Confidence 3799999998 33344444444
No 48
>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase.
Probab=85.19 E-value=0.88 Score=40.78 Aligned_cols=61 Identities=21% Similarity=0.456 Sum_probs=31.8
Q ss_pred CeeEeccccccc-cchhhhhhhhcCCCCCCCCCcc---CCCCCceEeCHHHHHHHHhhcC--cceEEecccc
Q psy3331 83 PVTVCGDIHGQY-IYMGAFCDLVWSDPAEVETWTV---SPRGAGWLFGAKVTHEFIHINH--LKLICRAHQL 148 (214)
Q Consensus 83 pv~vvGDiHGq~-LFLgl~~DlLWSDP~~~~g~~~---s~RG~g~~FG~~~v~~Fl~~n~--l~~IiRaHq~ 148 (214)
.+.|||||||.| -|..++.++-+. |....-|.. =.||. ....+-+|+..++ +.++.-.|+.
T Consensus 2 ~~YvIGDIHGc~daL~~LL~~i~f~-~~~D~l~~lGDlVdRGP----~slevL~~l~~l~~~~~~VlGNHD~ 68 (279)
T TIGR00668 2 ATYLIGDLHGCYDELQALLERVEFD-PGQDTLWLTGDLVARGP----GSLEVLRYVKSLGDAVRLVLGNHDL 68 (279)
T ss_pred cEEEEEcccCCHHHHHHHHHHhCcC-CCCCEEEEeCCccCCCC----CHHHHHHHHHhcCCCeEEEEChhHH
Confidence 368999999999 555555554332 221111110 01332 1333446776654 4456667886
No 49
>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain. PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp
Probab=84.31 E-value=0.45 Score=40.75 Aligned_cols=12 Identities=50% Similarity=1.168 Sum_probs=11.3
Q ss_pred CeeEeccccccc
Q psy3331 83 PVTVCGDIHGQY 94 (214)
Q Consensus 83 pv~vvGDiHGq~ 94 (214)
|+.|||||||+|
T Consensus 2 ~i~vigDIHG~~ 13 (234)
T cd07423 2 PFDIIGDVHGCY 13 (234)
T ss_pred CeEEEEECCCCH
Confidence 789999999999
No 50
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all
Probab=84.17 E-value=1.2 Score=37.32 Aligned_cols=63 Identities=14% Similarity=0.134 Sum_probs=34.2
Q ss_pred cccCCcchhhhhhhhhc--CCCCCcc-ccccchhHHH-HHHHHHHHHHhcCCCccccCC---CeeEecccccc
Q psy3331 28 FVKGGTYYTALAKMKIL--NFPPHVK-LDNIVHRSLE-TLCDFVCSILNEESNVQHVST---PVTVCGDIHGQ 93 (214)
Q Consensus 28 ~~rGnh~~~~~~~~~~~--~~e~~~~-~~~~~~~~l~-~l~~~a~~il~~ep~ll~l~~---pv~vvGDiHGq 93 (214)
++|||||...+....+. ..+.... ....+.+... .+.+...+.|.+-|..+++.. .+.+ +||.
T Consensus 59 ~v~GNhe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~i~~~g~~~~~---vHag 128 (207)
T cd07424 59 AVRGNHEQMAIDALRAEPLDAVRWLANGGEWFLDLPDEELRRWLALKLEQLPLAIEVETEGGKVGI---VHAD 128 (207)
T ss_pred EeECCChHHHHhHhhCCCcchhHHHhcCCeehhhcChHHHHHHHHHHHHhCCeEEEEEeCCCEEEE---ECCC
Confidence 78999999887654331 1111111 1111111111 245567778899998887754 3444 4884
No 51
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all
Probab=80.24 E-value=1.6 Score=36.51 Aligned_cols=12 Identities=58% Similarity=0.952 Sum_probs=10.6
Q ss_pred CeeEeccccccc
Q psy3331 83 PVTVCGDIHGQY 94 (214)
Q Consensus 83 pv~vvGDiHGq~ 94 (214)
.+.|+|||||++
T Consensus 2 ri~~isDiHg~~ 13 (207)
T cd07424 2 RDFVVGDIHGHY 13 (207)
T ss_pred CEEEEECCCCCH
Confidence 478999999998
No 52
>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional
Probab=78.38 E-value=0.96 Score=39.14 Aligned_cols=12 Identities=50% Similarity=0.933 Sum_probs=10.6
Q ss_pred CeeEeccccccc
Q psy3331 83 PVTVCGDIHGQY 94 (214)
Q Consensus 83 pv~vvGDiHGq~ 94 (214)
.+.|+|||||+|
T Consensus 2 ~~~vIGDIHG~~ 13 (245)
T PRK13625 2 KYDIIGDIHGCY 13 (245)
T ss_pred ceEEEEECccCH
Confidence 367999999999
No 53
>PHA02239 putative protein phosphatase
Probab=76.96 E-value=2.5 Score=36.68 Aligned_cols=11 Identities=55% Similarity=1.023 Sum_probs=9.9
Q ss_pred eeEeccccccc
Q psy3331 84 VTVCGDIHGQY 94 (214)
Q Consensus 84 v~vvGDiHGq~ 94 (214)
+.++|||||++
T Consensus 3 ~~~IsDIHG~~ 13 (235)
T PHA02239 3 IYVVPDIHGEY 13 (235)
T ss_pred EEEEECCCCCH
Confidence 57899999998
No 54
>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain. ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa
Probab=76.27 E-value=2.8 Score=36.96 Aligned_cols=57 Identities=18% Similarity=0.177 Sum_probs=36.9
Q ss_pred cccCCcchhhhhhhhhcCCCCCccccccchhHHHHH-----HHHHHHHHhcCCCccccCC-CeeEeccccccc
Q psy3331 28 FVKGGTYYTALAKMKILNFPPHVKLDNIVHRSLETL-----CDFVCSILNEESNVQHVST-PVTVCGDIHGQY 94 (214)
Q Consensus 28 ~~rGnh~~~~~~~~~~~~~e~~~~~~~~~~~~l~~l-----~~~a~~il~~ep~ll~l~~-pv~vvGDiHGq~ 94 (214)
.++||||...++-.++.... +. .+.+.++ .++..+.|.+.|..+.+.. .+.+| ||++
T Consensus 59 ~VlGNHD~~ll~~~~g~~~~---~~----~~t~~~~l~~~~~~~~~~wLr~lPl~~~~~~~~~l~v---HAGi 121 (257)
T cd07422 59 TVLGNHDLHLLAVAAGIKKP---KK----KDTLDDILNAPDRDELLDWLRHQPLLHRDPELGILMV---HAGI 121 (257)
T ss_pred EEcCCchHHHHHHhcCcccc---cc----HhHHHHHHhccchHHHHHHHHhCCCEEEECCccEEEE---ccCC
Confidence 79999999988766554321 11 1122222 3456788899999888764 56554 8876
No 55
>PRK00166 apaH diadenosine tetraphosphatase; Reviewed
Probab=75.68 E-value=2.5 Score=37.64 Aligned_cols=57 Identities=14% Similarity=0.071 Sum_probs=36.2
Q ss_pred cccCCcchhhhhhhhhcCCCCCccccccchhHHHH-----HHHHHHHHHhcCCCccccCC-CeeEeccccccc
Q psy3331 28 FVKGGTYYTALAKMKILNFPPHVKLDNIVHRSLET-----LCDFVCSILNEESNVQHVST-PVTVCGDIHGQY 94 (214)
Q Consensus 28 ~~rGnh~~~~~~~~~~~~~e~~~~~~~~~~~~l~~-----l~~~a~~il~~ep~ll~l~~-pv~vvGDiHGq~ 94 (214)
.++||||...+.-.++....- ..+.+.+ ..++..+.|.+.|..+++.. .+.+ +||++
T Consensus 61 ~VlGNHD~~ll~~~~g~~~~~-------~~~~l~~~l~~~~~~~~~~~L~~lPl~~~~~~~~~l~---vHAGi 123 (275)
T PRK00166 61 TVLGNHDLHLLAVAAGIKRNK-------KKDTLDPILEAPDRDELLDWLRHQPLLHVDEELGLVM---VHAGI 123 (275)
T ss_pred EEecChhHHHHHhhcCCcccc-------chhHHHHHHccccHHHHHHHHHCCCcEEEECCCCEEE---EccCC
Confidence 799999998887766653221 1112222 23446678899999888743 3545 48876
No 56
>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain. PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp
Probab=72.92 E-value=6.5 Score=33.54 Aligned_cols=62 Identities=15% Similarity=0.044 Sum_probs=34.1
Q ss_pred cccCCcchhhhhhhhhcCCCCCccccccchhHH----HHHHHHHHHHHhcCCCccccCC-CeeEecccccc
Q psy3331 28 FVKGGTYYTALAKMKILNFPPHVKLDNIVHRSL----ETLCDFVCSILNEESNVQHVST-PVTVCGDIHGQ 93 (214)
Q Consensus 28 ~~rGnh~~~~~~~~~~~~~e~~~~~~~~~~~~l----~~l~~~a~~il~~ep~ll~l~~-pv~vvGDiHGq 93 (214)
.+|||||...++...+-..... ....-+..++ .++.+...+.|.+-|..+.++. .+.+| ||.
T Consensus 72 ~v~GNHE~~l~~~~~~~~~~~~-~~~~~t~~~~~~~~~~~~~~~~~~l~~lP~~~~~~~~~~~~v---Hag 138 (234)
T cd07423 72 CVPGNHDNKLYRKLQGRNVKIT-HGLEETVAQLEAESEEFKEEVIEFYESLPSHLVLDEGKLVVA---HAG 138 (234)
T ss_pred EEECCcHHHHHHHhcCCCcccc-CcccchHHHHhhccHHHHHHHHHHHHhCCcEEEeCCCcEEEE---eCC
Confidence 7999999977654332111000 0000011111 2455677888899998777654 45554 884
No 57
>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase.
Probab=71.28 E-value=4 Score=36.60 Aligned_cols=57 Identities=18% Similarity=0.148 Sum_probs=37.9
Q ss_pred cccCCcchhhhhhhhhcCCCCCccccccchhHHH-----HHHHHHHHHHhcCCCccccCC-CeeEeccccccc
Q psy3331 28 FVKGGTYYTALAKMKILNFPPHVKLDNIVHRSLE-----TLCDFVCSILNEESNVQHVST-PVTVCGDIHGQY 94 (214)
Q Consensus 28 ~~rGnh~~~~~~~~~~~~~e~~~~~~~~~~~~l~-----~l~~~a~~il~~ep~ll~l~~-pv~vvGDiHGq~ 94 (214)
+++||||..-++..+++... +.. +.+. .+.++..+.|.+.|..++.+. .+++| ||++
T Consensus 61 ~VlGNHD~~lL~~~~g~~~~--~~~-----d~l~~~l~a~~~~ell~wLr~lPl~i~~~~~~~~lV---HAGi 123 (279)
T TIGR00668 61 LVLGNHDLHLLAVFAGISRN--KPK-----DRLDPLLEAPDADELLNWLRRQPLLQHDEEKKLVMA---HAGI 123 (279)
T ss_pred EEEChhHHHHHHHhcCCCcc--Cch-----HHHHHHHHccCHHHHHHHHHcCCcEEEeCCCCEEEE---ecCC
Confidence 79999999998877775322 111 1222 234667788999998876543 46564 9988
No 58
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain. YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for
Probab=70.11 E-value=59 Score=27.23 Aligned_cols=71 Identities=11% Similarity=0.152 Sum_probs=40.7
Q ss_pred eCHHHHHHHHhhc-CcceEEeccccccccceEe----e-CCcEEEEecCCCCCcCCCC-cEEEEEEcCC-CceeeEEeec
Q psy3331 125 FGAKVTHEFIHIN-HLKLICRAHQLVHEGYKYM----F-DGNLVTIWSAPNYCYRCGN-IASILKFNSV-DNRTPALFQA 196 (214)
Q Consensus 125 FG~~~v~~Fl~~n-~l~~IiRaHq~v~~Gy~~~----~-~~~~iTVfSA~nY~~~~~N-~aAvl~i~~~-~~~~f~~f~~ 196 (214)
-+++.+.+.++++ ++.+++=||.-. .+.... . ++.+..+.+-.......+| .=.++.++++ ..+.+.+|.|
T Consensus 135 ~~~~~~~~ll~~~~~V~~v~~GH~H~-~~~~~~~~~~~~g~~v~~~~~~~q~~~~~g~~~~r~~~f~~~~~~i~~~tysp 213 (214)
T cd07399 135 DGQQIWDKLVKKNDNVFMVLSGHVHG-AGRTTLVSVGDAGRTVHQMLADYQGEPNGGNGFLRLLEFDPDNNKIDVRTYSP 213 (214)
T ss_pred cHHHHHHHHHhCCCCEEEEEccccCC-CceEEEcccCCCCCEeeEEeecccCCCCCCcceEEEEEEecCCCEEEEEeCCC
Confidence 4566788889888 899999999554 233322 1 2334444332211111122 2346777777 4777777765
No 59
>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain. PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of
Probab=66.52 E-value=13 Score=31.55 Aligned_cols=37 Identities=11% Similarity=-0.119 Sum_probs=26.2
Q ss_pred HHHHHHHHhcCCCccccCCCeeEeccccccccchhhhhhhhcCCCC
Q psy3331 64 CDFVCSILNEESNVQHVSTPVTVCGDIHGQYIYMGAFCDLVWSDPA 109 (214)
Q Consensus 64 ~~~a~~il~~ep~ll~l~~pv~vvGDiHGq~LFLgl~~DlLWSDP~ 109 (214)
.....+.|.+-|..++.. .+.+| |+ |+-.|++|.-+.
T Consensus 116 ~~~~~~~l~~lP~~~~~~-~~~~V---HA-----g~~~~l~~~~~~ 152 (222)
T cd07413 116 HKDWLEWFKTLPLFLDLG-GVRVV---HA-----CWDETLLKGPEI 152 (222)
T ss_pred HHHHHHHHhcCCcEEEEC-CEEEE---EC-----CcCHhhccCCCc
Confidence 355677788888887764 45554 99 777889997664
No 60
>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain. PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of
Probab=63.07 E-value=3.2 Score=35.35 Aligned_cols=18 Identities=28% Similarity=0.410 Sum_probs=12.1
Q ss_pred eEeccccccc-cchhhhhh
Q psy3331 85 TVCGDIHGQY-IYMGAFCD 102 (214)
Q Consensus 85 ~vvGDiHGq~-LFLgl~~D 102 (214)
.|+|||||++ .|..++.+
T Consensus 2 ~vIGDIHG~~~~L~~lL~~ 20 (222)
T cd07413 2 DFIGDIHGHAEKLVVLLHK 20 (222)
T ss_pred EEEEeccCCHHHHHHHHHH
Confidence 4899999998 43333333
No 61
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [].; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A ....
Probab=61.82 E-value=48 Score=25.22 Aligned_cols=57 Identities=11% Similarity=0.117 Sum_probs=32.5
Q ss_pred eCHHHHHHHHhhcCcceEEeccccccccceEeeCCcEEEEecCCCCCcCCCCcEEEEEEc
Q psy3331 125 FGAKVTHEFIHINHLKLICRAHQLVHEGYKYMFDGNLVTIWSAPNYCYRCGNIASILKFN 184 (214)
Q Consensus 125 FG~~~v~~Fl~~n~l~~IiRaHq~v~~Gy~~~~~~~~iTVfSA~nY~~~~~N~aAvl~i~ 184 (214)
.+.+.+.+.+...+.++++-||--...-.+ .-+..+++.-|..... .+...+++.++
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~-~~~~~~~~~Gs~~~~~--~~~~~~~~i~~ 152 (156)
T PF12850_consen 96 WDPAELREILSRENVDLVLHGHTHRPQVFK-IGGIHVINPGSIGGPR--HGDQSGYAILD 152 (156)
T ss_dssp TTHHHHHHHHHHTTSSEEEESSSSSEEEEE-ETTEEEEEE-GSSS-S--SSSSEEEEEEE
T ss_pred cChhhhhhhhcccCCCEEEcCCcccceEEE-ECCEEEEECCcCCCCC--CCCCCEEEEEE
Confidence 456667788889999999999977643322 2233355554443322 22255555543
No 62
>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain. Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s
Probab=55.74 E-value=5.2 Score=35.33 Aligned_cols=11 Identities=36% Similarity=0.628 Sum_probs=9.9
Q ss_pred eeEeccccccc
Q psy3331 84 VTVCGDIHGQY 94 (214)
Q Consensus 84 v~vvGDiHGq~ 94 (214)
|.|+||+||+|
T Consensus 1 i~v~Gd~HG~~ 11 (262)
T cd00844 1 IAVEGCCHGEL 11 (262)
T ss_pred CEEEecCCccH
Confidence 57999999998
No 63
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain. This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal
Probab=55.35 E-value=4.9 Score=33.95 Aligned_cols=10 Identities=40% Similarity=0.886 Sum_probs=8.9
Q ss_pred eEeccccccc
Q psy3331 85 TVCGDIHGQY 94 (214)
Q Consensus 85 ~vvGDiHGq~ 94 (214)
+|+|||||++
T Consensus 1 ~vi~DIHG~~ 10 (208)
T cd07425 1 VAIGDLHGDL 10 (208)
T ss_pred CEEeCccCCH
Confidence 4799999998
No 64
>PF10083 DUF2321: Uncharacterized protein conserved in bacteria (DUF2321); InterPro: IPR016891 This entry is represented by Bacteriophage 'Lactobacillus prophage Lj928', Orf-Ljo1454. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=52.26 E-value=5.2 Score=32.99 Aligned_cols=49 Identities=22% Similarity=0.367 Sum_probs=33.4
Q ss_pred eEeCHHHHHHHHhhcCcceE---------EeccccccccceEeeCCcEEEEecCCCCCcCCCCc
Q psy3331 123 WLFGAKVTHEFIHINHLKLI---------CRAHQLVHEGYKYMFDGNLVTIWSAPNYCYRCGNI 177 (214)
Q Consensus 123 ~~FG~~~v~~Fl~~n~l~~I---------iRaHq~v~~Gy~~~~~~~~iTVfSA~nY~~~~~N~ 177 (214)
+--+++..+.||.+.|=+.| |||+-.++..+.+- .=|.+|.||.+||..
T Consensus 20 ~~~~p~~~~~fC~kCG~~tI~~Cp~C~~~IrG~y~v~gv~~~g------~~~~~PsYC~~CGkp 77 (158)
T PF10083_consen 20 YDKNPELREKFCSKCGAKTITSCPNCSTPIRGDYHVEGVFGLG------GHYEAPSYCHNCGKP 77 (158)
T ss_pred cccCchHHHHHHHHhhHHHHHHCcCCCCCCCCceecCCeeeeC------CCCCCChhHHhCCCC
Confidence 33456677888888886655 88887774444332 226699999998863
No 65
>PF09637 Med18: Med18 protein; InterPro: IPR019095 The Mediator complex is a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. The Mediator complex, having a compact conformation in its free form, is recruited to promoters by direct interactions with regulatory proteins and serves for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. On recruitment the Mediator complex unfolds to an extended conformation and partially surrounds RNA polymerase II, specifically interacting with the unphosphorylated form of the C-terminal domain (CTD) of RNA polymerase II. The Mediator complex dissociates from the RNA polymerase II holoenzyme and stays at the promoter when transcriptional elongation begins. The Mediator complex is composed of at least 31 subunits: MED1, MED4, MED6, MED7, MED8, MED9, MED10, MED11, MED12, MED13, MED13L, MED14, MED15, MED16, MED17, MED18, MED19, MED20, MED21, MED22, MED23, MED24, MED25, MED26, MED27, MED29, MED30, MED31, CCNC, CDK8 and CDC2L6/CDK11. The subunits form at least three structurally distinct submodules. The head and the middle modules interact directly with RNA polymerase II, whereas the elongated tail module interacts with gene-specific regulatory proteins. Mediator containing the CDK8 module is less active than Mediator lacking this module in supporting transcriptional activation. The head module contains: MED6, MED8, MED11, SRB4/MED17, SRB5/MED18, ROX3/MED19, SRB2/MED20 and SRB6/MED22. The middle module contains: MED1, MED4, NUT1/MED5, MED7, CSE2/MED9, NUT2/MED10, SRB7/MED21 and SOH1/MED31. CSE2/MED9 interacts directly with MED4. The tail module contains: MED2, PGD1/MED3, RGR1/MED14, GAL11/MED15 and SIN4/MED16. The CDK8 module contains: MED12, MED13, CCNC and CDK8. Individual preparations of the Mediator complex lacking one or more distinct subunits have been variously termed ARC, CRSP, DRIP, PC2, SMCC and TRAP. Med18 is one subunit of the Mediator complex and a component of the head module that is involved in stimulating basal RNA polymerase II (PolII) transcription. Med18 consists of an eight-stranded beta-barrel with a central pore and three flanking helices. It complexes with Med8 and Med20 proteins by forming a heterodimer of two-fold symmetry with Med20 and binding the C-terminal alpha-helix region of Med8 across the top of its barrel. This complex creates a multipartite TBP-binding site that can be modulated by transcriptional activators []. ; GO: 0001104 RNA polymerase II transcription cofactor activity, 0006357 regulation of transcription from RNA polymerase II promoter, 0016592 mediator complex; PDB: 2HZM_F 2HZS_H 3RJ1_E 3C0T_A.
Probab=52.23 E-value=18 Score=31.52 Aligned_cols=70 Identities=10% Similarity=0.121 Sum_probs=43.9
Q ss_pred CHHHHHHHHhhcCcceEEeccccccccceEeeCCcEEEEecCCCCCcC---CCCcEEEEEEcCCCceeeEEeecCC
Q psy3331 126 GAKVTHEFIHINHLKLICRAHQLVHEGYKYMFDGNLVTIWSAPNYCYR---CGNIASILKFNSVDNRTPALFQAVP 198 (214)
Q Consensus 126 G~~~v~~Fl~~n~l~~IiRaHq~v~~Gy~~~~~~~~iTVfSA~nY~~~---~~N~aAvl~i~~~~~~~f~~f~~~~ 198 (214)
...-+-+||+.+|... .+|.+.+||.|.+++-.|+||---..... ..+..+.-.++..+.+-+..+-.++
T Consensus 139 ~~~~~~~fl~~lGy~~---~~Eyv~~G~~F~~g~i~I~l~ri~~~~~~~~~~~~~~~l~~~d~s~~~lv~a~v~v~ 211 (250)
T PF09637_consen 139 TSGSLLSFLNELGYRF---DYEYVVEGYRFFKGDIVIELFRIFKVPPPGQYPPPFDKLKPLDPSGSWLVEASVNVP 211 (250)
T ss_dssp SSSSHHHHHHHTTEEE---EEEEEEEEEEEEECCEEEEEEEEEEEETTCCE---SS-EEECTTTTEEEEEEEEEES
T ss_pred CCCCHHHHHHHcCCce---EEEEEEEEEEEEECCEEEEEEEEEecCCCCCCCCCcccCCccCCCCCEEEEEEEEcc
Confidence 5667779999999665 58999999999998877887643322111 0122344455555555555554444
No 66
>cd02977 ArsC_family Arsenate Reductase (ArsC) family; composed of TRX-fold arsenic reductases and similar proteins including the transcriptional regulator, Spx. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione (GSH) via glutaredoxin (GRX), through a single catalytic cysteine. This family of predominantly bacterial enzymes is unrelated to two other families of arsenate reductases which show similarity to low-molecular-weight acid phosphatases and phosphotyrosyl phosphatases. Spx is a general regulator that exerts negative and positive control over transcription initiation by binding to the C-terminal domain of the alpha subunit of RNA polymerase.
Probab=40.68 E-value=26 Score=25.84 Aligned_cols=23 Identities=22% Similarity=0.509 Sum_probs=18.8
Q ss_pred HHHHHHHhcCCCccccCCCeeEecc
Q psy3331 65 DFVCSILNEESNVQHVSTPVTVCGD 89 (214)
Q Consensus 65 ~~a~~il~~ep~ll~l~~pv~vvGD 89 (214)
+++.+++.+.|.+ ++.||+|.||
T Consensus 77 ~e~~~~l~~~p~L--ikRPii~~~~ 99 (105)
T cd02977 77 EEALELMAEHPKL--IKRPIVVDGD 99 (105)
T ss_pred HHHHHHHHhCcCe--eeCCEEEECC
Confidence 5566778889999 7899998876
No 67
>cd03032 ArsC_Spx Arsenate Reductase (ArsC) family, Spx subfamily; Spx is a unique RNA polymerase (RNAP)-binding protein present in bacilli and some mollicutes. It inhibits transcription by binding to the C-terminal domain of the alpha subunit of RNAP, disrupting complex formation between RNAP and certain transcriptional activator proteins like ResD and ComA. In response to oxidative stress, Spx can also activate transcription, making it a general regulator that exerts both positive and negative control over transcription initiation. Spx has been shown to exert redox-sensitive transcriptional control over genes like trxA (TRX) and trxB (TRX reductase), genes that function in thiol homeostasis. This redox-sensitive activity is dependent on the presence of a CXXC motif, present in some members of the Spx subfamily, that acts as a thiol/disulfide switch. Spx has also been shown to repress genes in a sulfate-dependent manner independent of the presence of the CXXC motif.
Probab=38.27 E-value=26 Score=26.56 Aligned_cols=23 Identities=9% Similarity=0.317 Sum_probs=18.1
Q ss_pred HHHHHHHhcCCCccccCCCeeEecc
Q psy3331 65 DFVCSILNEESNVQHVSTPVTVCGD 89 (214)
Q Consensus 65 ~~a~~il~~ep~ll~l~~pv~vvGD 89 (214)
+++.+++.++|.+ |++||++.||
T Consensus 77 ~e~i~~l~~~p~L--ikRPii~~~~ 99 (115)
T cd03032 77 SELIRLISEHPSL--LRRPIIIDEK 99 (115)
T ss_pred HHHHHHHHhChhh--eeCCEEEeCC
Confidence 4567788899999 7899987665
No 68
>TIGR01617 arsC_related transcriptional regulator, Spx/MgsR family. This model represents a portion of the proteins within the larger set covered by Pfam model pfam03960. That larger family includes a glutaredoxin-dependent arsenate reductase (TIGR00014). Characterized members of this family include Spx and MgsR from Bacillus subtili. Spx is a global regulator for response to thiol-specific oxidative stress. It interacts with RNA polymerase. MgsR (modulator of the general stress response, also called YqgZ) provides a second level of regulation for more than a third of the proteins in the B. subtilis general stress regulon controlled by Sigma-B.
Probab=37.50 E-value=29 Score=26.34 Aligned_cols=23 Identities=17% Similarity=0.290 Sum_probs=19.4
Q ss_pred HHHHHHHhcCCCccccCCCeeEecc
Q psy3331 65 DFVCSILNEESNVQHVSTPVTVCGD 89 (214)
Q Consensus 65 ~~a~~il~~ep~ll~l~~pv~vvGD 89 (214)
+++.+++.++|.+ |+.||++.||
T Consensus 78 ~e~~~~i~~~p~L--ikRPIi~~~~ 100 (117)
T TIGR01617 78 KEALELLAEDPAL--LRRPLIVDTK 100 (117)
T ss_pred HHHHHHHHhCcce--EecCEEEeCC
Confidence 5577888999999 7899998876
No 69
>PRK01655 spxA transcriptional regulator Spx; Reviewed
Probab=36.68 E-value=31 Score=27.05 Aligned_cols=23 Identities=4% Similarity=0.306 Sum_probs=18.6
Q ss_pred HHHHHHHhcCCCccccCCCeeEecc
Q psy3331 65 DFVCSILNEESNVQHVSTPVTVCGD 89 (214)
Q Consensus 65 ~~a~~il~~ep~ll~l~~pv~vvGD 89 (214)
+++.+++.++|.+ |+.||++.||
T Consensus 77 ~e~i~ll~~~p~L--ikRPIi~~~~ 99 (131)
T PRK01655 77 QDLIKLISDNPGL--LRRPIIIDEK 99 (131)
T ss_pred HHHHHHHHhCcce--EeCCEEEECC
Confidence 5577888999999 7899988665
No 70
>COG1424 BioW Pimeloyl-CoA synthetase [Coenzyme metabolism]
Probab=34.78 E-value=32 Score=29.69 Aligned_cols=16 Identities=6% Similarity=0.152 Sum_probs=12.3
Q ss_pred HHHHHHHHHHhcCCCc
Q psy3331 62 TLCDFVCSILNEESNV 77 (214)
Q Consensus 62 ~l~~~a~~il~~ep~l 77 (214)
+++++|.+++.+..++
T Consensus 92 ~vi~ka~e~i~k~~~~ 107 (239)
T COG1424 92 QVINKAYEIIKKGGVM 107 (239)
T ss_pred HHHHHHHHhhccCCce
Confidence 7788888888887643
No 71
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=33.14 E-value=66 Score=28.29 Aligned_cols=56 Identities=7% Similarity=-0.148 Sum_probs=36.1
Q ss_pred eCHHHHHHHHhhcCcceEEeccccccccceEeeCCcEEEEecCCCCCcCCCCcEEEEEEcCCCc
Q psy3331 125 FGAKVTHEFIHINHLKLICRAHQLVHEGYKYMFDGNLVTIWSAPNYCYRCGNIASILKFNSVDN 188 (214)
Q Consensus 125 FG~~~v~~Fl~~n~l~~IiRaHq~v~~Gy~~~~~~~~iTVfSA~nY~~~~~N~aAvl~i~~~~~ 188 (214)
..++++.+-+++++++.+|=||--.+..-...--.+++ . |.....+|+++++++..
T Consensus 174 ~~~~~v~~~~~~~~vd~vI~GH~Hr~ai~~i~~~~yi~----l----GdW~~~~s~~~v~~~~~ 229 (237)
T COG2908 174 VNPAAVADEARRHGVDGVIHGHTHRPAIHNIPGITYIN----L----GDWVSEGSILEVDDGGL 229 (237)
T ss_pred hhHHHHHHHHHHcCCCEEEecCcccHhhccCCCceEEe----c----CcchhcceEEEEecCcE
Confidence 45778888899999999999996655444332211111 1 22235689999976643
No 72
>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain. MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to
Probab=28.23 E-value=37 Score=27.15 Aligned_cols=14 Identities=14% Similarity=0.359 Sum_probs=10.9
Q ss_pred cCCCeeEecccccc
Q psy3331 80 VSTPVTVCGDIHGQ 93 (214)
Q Consensus 80 l~~pv~vvGDiHGq 93 (214)
.+..+.++|.+|+.
T Consensus 121 ~~~~~~l~GH~H~~ 134 (156)
T cd08165 121 LKPRLVLSGHTHSF 134 (156)
T ss_pred hCCCEEEEcccCCC
Confidence 34557899999994
No 73
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=28.03 E-value=92 Score=29.51 Aligned_cols=74 Identities=16% Similarity=0.176 Sum_probs=42.8
Q ss_pred HHHHHHHHHhCCCCCcccccccccccCCcchhhhhhhhhcCCCCCccccccchhHHHHHHHHHHHHHhcCCCccccCCCe
Q psy3331 5 LDEWVEIAQQCKYLPENELKSKKFVKGGTYYTALAKMKILNFPPHVKLDNIVHRSLETLCDFVCSILNEESNVQHVSTPV 84 (214)
Q Consensus 5 ~~~~~~~~~~~~~~~e~~~~~~~~~rGnh~~~~~~~~~~~~~e~~~~~~~~~~~~l~~l~~~a~~il~~ep~ll~l~~pv 84 (214)
|++.|..+++...++++--. +-...+ .+....|.++.-=..+.++..+..+...-|..-. ..|+
T Consensus 123 L~~~I~~lK~~~~L~~d~kl--------------~ls~tl-~P~n~EYQN~GIMqAiD~INAl~~l~k~~~~~~~-~lp~ 186 (403)
T PF11144_consen 123 LNQNITELKEQGILPQDYKL--------------NLSCTL-IPPNGEYQNFGIMQAIDIINALLDLKKIFPKNGG-GLPK 186 (403)
T ss_pred HHHHHHHHHhcCCCCCCcEE--------------eEEEEe-cCCchhhhhhHHHHHHHHHHHHHHHHHhhhcccC-CCcE
Confidence 77888888887777653222 111111 1333444444444445566666555555343322 4599
Q ss_pred eEeccccccc
Q psy3331 85 TVCGDIHGQY 94 (214)
Q Consensus 85 ~vvGDiHGq~ 94 (214)
+.+|--||+|
T Consensus 187 I~~G~s~G~y 196 (403)
T PF11144_consen 187 IYIGSSHGGY 196 (403)
T ss_pred EEEecCcHHH
Confidence 9999999999
No 74
>COG3168 PilP Tfp pilus assembly protein PilP [Cell motility and secretion / Intracellular trafficking and secretion]
Probab=25.79 E-value=1.3e+02 Score=25.13 Aligned_cols=71 Identities=15% Similarity=0.259 Sum_probs=40.9
Q ss_pred CCCCCCCCCccCCCCCceEeCHHHHHHH-HhhcCcceEEeccccccccceEeeCCcEEEEecCCCCCcCCCCcEEEEEEc
Q psy3331 106 SDPAEVETWTVSPRGAGWLFGAKVTHEF-IHINHLKLICRAHQLVHEGYKYMFDGNLVTIWSAPNYCYRCGNIASILKFN 184 (214)
Q Consensus 106 SDP~~~~g~~~s~RG~g~~FG~~~v~~F-l~~n~l~~IiRaHq~v~~Gy~~~~~~~~iTVfSA~nY~~~~~N~aAvl~i~ 184 (214)
+||...++|.|.++.. ...+++| |+...+.-++.+-|-+ .++ ....+.+++|- +-+|.| .|.|-|..|+
T Consensus 71 t~~q~~n~~~Pdp~r~-----kepLE~fpLe~~rlvGtm~~g~~~-~A~-i~~~~~v~~V~-vG~YlG--qN~GrV~rI~ 140 (170)
T COG3168 71 TDPQGENDWAPDPKRR-----KEPLEKFPLETFRLVGTLKSGQGV-SAL-IEAPGGVYRVR-VGQYLG--QNYGRVVRIT 140 (170)
T ss_pred ccccccCCCCCCcccc-----cCchhhCChhheeeEEEecCCCce-EEE-EEcCCceEEEe-eccEee--ccCceEEEec
Confidence 8888777798887643 2233444 4444444444443332 111 12244455555 456766 6999999997
Q ss_pred CC
Q psy3331 185 SV 186 (214)
Q Consensus 185 ~~ 186 (214)
++
T Consensus 141 d~ 142 (170)
T COG3168 141 DD 142 (170)
T ss_pred CC
Confidence 76
No 75
>PRK13344 spxA transcriptional regulator Spx; Reviewed
Probab=25.50 E-value=60 Score=25.50 Aligned_cols=23 Identities=13% Similarity=0.421 Sum_probs=18.0
Q ss_pred HHHHHHHhcCCCccccCCCeeEecc
Q psy3331 65 DFVCSILNEESNVQHVSTPVTVCGD 89 (214)
Q Consensus 65 ~~a~~il~~ep~ll~l~~pv~vvGD 89 (214)
+++.+++.+.|.+ |+.||++.|+
T Consensus 77 ~e~i~ll~~~P~L--ikRPIv~~~~ 99 (132)
T PRK13344 77 NEVIDLIQENPRI--LKSPILIDDK 99 (132)
T ss_pred HHHHHHHHhCccc--eeCcEEEeCC
Confidence 5677888999999 7899977543
No 76
>COG1875 NYN ribonuclease and ATPase of PhoH family domains [General function prediction only]
Probab=25.40 E-value=51 Score=31.24 Aligned_cols=63 Identities=16% Similarity=0.240 Sum_probs=44.7
Q ss_pred HHHHHHHHhCCCCCcccccccccccCCcchhhhhhhhhcCCCCCccccccchhHHHHHHHHHHHHHhcCCCccccCCCee
Q psy3331 6 DEWVEIAQQCKYLPENELKSKKFVKGGTYYTALAKMKILNFPPHVKLDNIVHRSLETLCDFVCSILNEESNVQHVSTPVT 85 (214)
Q Consensus 6 ~~~~~~~~~~~~~~e~~~~~~~~~rGnh~~~~~~~~~~~~~e~~~~~~~~~~~~l~~l~~~a~~il~~ep~ll~l~~pv~ 85 (214)
++.++.+.....+. +++--.+|| |++.+.|..-+||| ++++.++..|+..|-+ .+.|+
T Consensus 325 ~~~l~~~l~~~~ie---v~alt~IRG----RSl~~~FiIIDEaQ----NLTpheikTiltR~G~-----------GsKIV 382 (436)
T COG1875 325 DRALEEILSRGRIE---VEALTYIRG----RSLPDSFIIIDEAQ----NLTPHELKTILTRAGE-----------GSKIV 382 (436)
T ss_pred hHHHHHHHhcccee---eeeeeeecc----cccccceEEEehhh----ccCHHHHHHHHHhccC-----------CCEEE
Confidence 34444444433333 333336776 88999999999987 8999999999988855 66787
Q ss_pred Eeccc
Q psy3331 86 VCGDI 90 (214)
Q Consensus 86 vvGDi 90 (214)
..||+
T Consensus 383 l~gd~ 387 (436)
T COG1875 383 LTGDP 387 (436)
T ss_pred EcCCH
Confidence 77887
No 77
>KOG1503|consensus
Probab=25.19 E-value=40 Score=30.18 Aligned_cols=16 Identities=38% Similarity=0.721 Sum_probs=13.8
Q ss_pred ccCCCeeEeccccccc
Q psy3331 79 HVSTPVTVCGDIHGQY 94 (214)
Q Consensus 79 ~l~~pv~vvGDiHGq~ 94 (214)
..++|++||||+-|..
T Consensus 234 k~kppltvvgdvggri 249 (354)
T KOG1503|consen 234 KEKPPLTVVGDVGGRI 249 (354)
T ss_pred ccCCCeEEEeccCceE
Confidence 4578999999999976
No 78
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain. YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv
Probab=25.13 E-value=2.4e+02 Score=21.23 Aligned_cols=29 Identities=14% Similarity=0.068 Sum_probs=24.2
Q ss_pred CHHHHHHHHhhcCcceEEeccccccccce
Q psy3331 126 GAKVTHEFIHINHLKLICRAHQLVHEGYK 154 (214)
Q Consensus 126 G~~~v~~Fl~~n~l~~IiRaHq~v~~Gy~ 154 (214)
+.+.+.+.+++.+.++++=||.-....+.
T Consensus 101 ~~~~~~~~l~~~~~~~~l~GH~H~~~~~~ 129 (144)
T cd07400 101 DAGDALKLLAEAGVDLVLHGHKHVPYVGN 129 (144)
T ss_pred CHHHHHHHHHHcCCCEEEECCCCCcCeee
Confidence 78889999999999999999987765444
No 79
>cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain. Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the
Probab=24.34 E-value=23 Score=30.04 Aligned_cols=16 Identities=13% Similarity=0.109 Sum_probs=12.1
Q ss_pred ccCCCeeEeccccccc
Q psy3331 79 HVSTPVTVCGDIHGQY 94 (214)
Q Consensus 79 ~l~~pv~vvGDiHGq~ 94 (214)
..+..++++|..||+-
T Consensus 142 ~~~~dl~lSGHtHgGq 157 (193)
T cd08164 142 EGKPGLILTGHDHEGC 157 (193)
T ss_pred cCCCCEEEeCccCCCe
Confidence 3455689999999953
No 80
>KOG0918|consensus
Probab=22.48 E-value=46 Score=31.75 Aligned_cols=103 Identities=12% Similarity=-0.007 Sum_probs=66.8
Q ss_pred CeeEeccccccccchhhhhhhhcCCCCCCCCCccC---CCCCceEeCHH--HHHHHHhhcCcceEEeccccccccceEee
Q psy3331 83 PVTVCGDIHGQYIYMGAFCDLVWSDPAEVETWTVS---PRGAGWLFGAK--VTHEFIHINHLKLICRAHQLVHEGYKYMF 157 (214)
Q Consensus 83 pv~vvGDiHGq~LFLgl~~DlLWSDP~~~~g~~~s---~RG~g~~FG~~--~v~~Fl~~n~l~~IiRaHq~v~~Gy~~~~ 157 (214)
+|...||--| ..+. |-++.+.+.+..+ .+|..-+||.| ..-.++.....+...++|+....+.+...
T Consensus 152 ~vs~lGd~~g-------n~kg-~f~llD~~~~~k~tw~~~~~~p~~gyDfwyqpr~~~mIstewgap~~~~~gf~~~~v~ 223 (476)
T KOG0918|consen 152 MVSCLGDAEG-------NAKG-GFLLLDSDFNEKGTWEKPGHSPLFGYDFWYQPRHNVMISTEWGAPNALRKGFNPADVE 223 (476)
T ss_pred eEEeeccccc-------CCcC-CeEEecCccceecccccCCCccccccceeeccccceEEeecccCchhhhcCCChhHhh
Confidence 4666788877 3444 7777664432222 23344444544 33456667777888899988755555554
Q ss_pred CCcEEEEecCCCCCcCCCCcEEEEEEcCCC--ceeeEEee
Q psy3331 158 DGNLVTIWSAPNYCYRCGNIASILKFNSVD--NRTPALFQ 195 (214)
Q Consensus 158 ~~~~iTVfSA~nY~~~~~N~aAvl~i~~~~--~~~f~~f~ 195 (214)
++ ++.++++-|.-..++..+.+.+..++ ..+++.++
T Consensus 224 d~--lyg~~lhvy~w~~~~~~QtidL~~~gllpleiRfLh 261 (476)
T KOG0918|consen 224 DG--LYGSHLHVYQWSPGELKQTIDLGDTGLLPLEIRFLH 261 (476)
T ss_pred cc--ceeeeeEEEecCCccceeEEecCCCCcceEEeeecc
Confidence 55 88999999998889999999997763 23444444
No 81
>TIGR02118 conserved hypothetical protein. This model represents a small family of proteins of unknown function, each about 105 amino acids in length. Conserved sites in the multiple alignment include a pair of aromatic residues, a histidine, and an aspartate.
Probab=22.30 E-value=74 Score=23.29 Aligned_cols=35 Identities=6% Similarity=-0.037 Sum_probs=26.6
Q ss_pred hhHHHHHH--HHHHHHHhcCCCccccCCCeeEeccccc
Q psy3331 57 HRSLETLC--DFVCSILNEESNVQHVSTPVTVCGDIHG 92 (214)
Q Consensus 57 ~~~l~~l~--~~a~~il~~ep~ll~l~~pv~vvGDiHG 92 (214)
.+.+.+.+ .....++..+++..... |++.+|++++
T Consensus 63 ~e~~~~a~~sp~~~~~~~D~~nF~d~~-~~~~~~e~~~ 99 (100)
T TIGR02118 63 IEDFQAAFDSPEGKAAAADVANFADGA-PTMQISEEVD 99 (100)
T ss_pred HHHHHHHHcCHHHHHHHHHHHhhcCCC-ceEEEEEEec
Confidence 44444444 44577889999999998 9999999876
No 82
>TIGR00014 arsC arsenate reductase (glutaredoxin). composed of two polypeptides, the products of the arsA and arsB genes. The pump alone produces resistance to arsenite and antimonite. This protein, ArsC, catalyzes the reduction of arsenate to arsenite, and thus extends resistance to include arsenate.
Probab=21.89 E-value=89 Score=23.68 Aligned_cols=23 Identities=17% Similarity=0.316 Sum_probs=18.0
Q ss_pred HHHHHHHhcCCCccccCCCeeEecc
Q psy3331 65 DFVCSILNEESNVQHVSTPVTVCGD 89 (214)
Q Consensus 65 ~~a~~il~~ep~ll~l~~pv~vvGD 89 (214)
+++.+++.+.|.++ +.||++.||
T Consensus 77 ~e~i~~l~~~P~Li--kRPIi~~~~ 99 (114)
T TIGR00014 77 QELLDAMVAHPILL--ERPIVVAGD 99 (114)
T ss_pred HHHHHHHHHCcCcc--cCCeEEECC
Confidence 45777888899885 789988765
No 83
>PF02562 PhoH: PhoH-like protein; InterPro: IPR003714 PhoH is a cytoplasmic protein and predicted ATPase that is induced by phosphate starvation and belongings to the phosphate regulon (pho) in Escherichia coli [].; GO: 0005524 ATP binding; PDB: 3B85_A.
Probab=21.12 E-value=32 Score=29.36 Aligned_cols=49 Identities=14% Similarity=0.318 Sum_probs=27.4
Q ss_pred ccccccccCCcchhhhhhhhhcCCCCCccccccchhHHHHHHHHHHHHHhcCCCccccCCCeeEeccc
Q psy3331 23 LKSKKFVKGGTYYTALAKMKILNFPPHVKLDNIVHRSLETLCDFVCSILNEESNVQHVSTPVTVCGDI 90 (214)
Q Consensus 23 ~~~~~~~rGnh~~~~~~~~~~~~~e~~~~~~~~~~~~l~~l~~~a~~il~~ep~ll~l~~pv~vvGDi 90 (214)
+.|.-++|| |.+...+..-+|+| +++++++..++..+-+ ++.++++||+
T Consensus 107 ~~~~~~iRG----rt~~~~~iIvDEaQ----N~t~~~~k~ilTR~g~-----------~skii~~GD~ 155 (205)
T PF02562_consen 107 IEPLAFIRG----RTFDNAFIIVDEAQ----NLTPEELKMILTRIGE-----------GSKIIITGDP 155 (205)
T ss_dssp EEEGGGGTT------B-SEEEEE-SGG----G--HHHHHHHHTTB-T-----------T-EEEEEE--
T ss_pred EEehhhhcC----ccccceEEEEeccc----CCCHHHHHHHHcccCC-----------CcEEEEecCc
Confidence 344447777 44556677778776 6778888777655433 6789999999
No 84
>cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain. CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site
Probab=20.92 E-value=39 Score=27.26 Aligned_cols=10 Identities=50% Similarity=1.242 Sum_probs=8.9
Q ss_pred eEeccccccc
Q psy3331 85 TVCGDIHGQY 94 (214)
Q Consensus 85 ~vvGDiHGq~ 94 (214)
.||||+||++
T Consensus 1 LV~G~~~G~l 10 (150)
T cd07380 1 LVCGDVNGRL 10 (150)
T ss_pred CeeecCCccH
Confidence 3899999999
No 85
>PRK14835 undecaprenyl pyrophosphate synthase; Provisional
Probab=20.57 E-value=1e+02 Score=27.53 Aligned_cols=49 Identities=8% Similarity=0.046 Sum_probs=29.2
Q ss_pred hhhcCCCCCccccccchhHHHHHHHHHHHHHhcCCCccccCCCeeEeccc
Q psy3331 41 MKILNFPPHVKLDNIVHRSLETLCDFVCSILNEESNVQHVSTPVTVCGDI 90 (214)
Q Consensus 41 ~~~~~~e~~~~~~~~~~~~l~~l~~~a~~il~~ep~ll~l~~pv~vvGDi 90 (214)
.|.|-+|-.+ ++.-+-+.+..|+....+-+.+.|.+.+-.--|.++||+
T Consensus 91 vYaFS~EN~~-R~~~EV~~Lm~L~~~~l~~~~~~~~~~~~~irir~iGd~ 139 (275)
T PRK14835 91 IWVFSTDNFS-RSPAEVETLMNLFEREARRMAVDPRIHANRVRVRAIGRH 139 (275)
T ss_pred EEEEEccccC-CCHHHHHHHHHHHHHHHHHHhchhhhhhCCeEEEEecCh
Confidence 5777777663 555545555555544433333344565556678899998
No 86
>PF03960 ArsC: ArsC family; InterPro: IPR006660 Several bacterial taxon have a chromosomal resistance system, encoded by the ars operon, for the detoxification of arsenate, arsenite, and antimonite []. This system transports arsenite and antimonite out of the cell. The pump is composed of two polypeptides, the products of the arsA and arsB genes. This two-subunit enzyme produces resistance to arsenite and antimonite. Arsenate, however, must first be reduced to arsenite before it is extruded. A third gene, arsC, expands the substrate specificity to allow for arsenate pumping and resistance. ArsC is an approximately 150-residue arsenate reductase that uses reduced glutathione (GSH) to convert arsenate to arsenite with a redox active cysteine residue in the active site. ArsC forms an active quaternary complex with GSH, arsenate, and glutaredoxin 1 (Grx1). The three ligands must be present simultaneously for reduction to occur []. The arsC family also comprises the Spx proteins which are GRAM-positive bacterial transcription factors that regulate the transcription of multiple genes in response to disulphide stress []. The arsC protein structure has been solved []. It belongs to the thioredoxin superfamily fold which is defined by a beta-sheet core surrounded by alpha-helices. The active cysteine residue of ArsC is located in the loop between the first beta-strand and the first helix, which is also conserved in the Spx protein and its homologues.; PDB: 2KOK_A 1SK1_A 1SK2_A 1JZW_A 1J9B_A 1S3C_A 1SD8_A 1SD9_A 1I9D_A 1SK0_A ....
Probab=20.23 E-value=91 Score=23.23 Aligned_cols=22 Identities=23% Similarity=0.469 Sum_probs=16.2
Q ss_pred HHHHHHHhcCCCccccCCCeeEec
Q psy3331 65 DFVCSILNEESNVQHVSTPVTVCG 88 (214)
Q Consensus 65 ~~a~~il~~ep~ll~l~~pv~vvG 88 (214)
+++.+++.++|.+ |++||++-|
T Consensus 74 ~e~i~~l~~~p~L--ikRPIi~~~ 95 (110)
T PF03960_consen 74 EELIELLLENPKL--IKRPIIVDG 95 (110)
T ss_dssp HHHHHHHHHSGGG--B-SSEEEET
T ss_pred HHHHHHHHhChhh--eeCCEEEEC
Confidence 4566778889988 688998766
Done!