BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3337
(297 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9WUQ2|PREB_MOUSE Prolactin regulatory element-binding protein OS=Mus musculus
GN=Preb PE=1 SV=1
Length = 417
Score = 130 bits (326), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 129/240 (53%), Gaps = 13/240 (5%)
Query: 63 KQKGGKKEKSNEKGKNKKDKIEDPPIL--NSIDSKEKNLRFGFKTFDSVQTVFAGSESLQ 120
+QKG K EKS K + + + PP + + + K ++VQT F+ +E LQ
Sbjct: 99 QQKGSKAEKSGSKEQGPRQRKGAPPAEKKSGAQVHPEGVELKVKNLEAVQTDFS-NEPLQ 157
Query: 121 RVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAKD 180
+VV + + L+ TGGTDGH+R+W P ++ +L +AH EI D+ G ++V++ D
Sbjct: 158 KVVCFNHDNTLLATGGTDGHVRVWKVPSLEKVLEFKAHEGEIGDLTLGPDG-KLVTVGWD 216
Query: 181 GKAFVWNSKNGSLSKELKW--NTP--DNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQN 236
KA VW L +L+W N P N Y ++ CR+G V D RLFT+ P +
Sbjct: 217 FKASVWQKDQ--LVTQLQWQENGPASSNTPYRYQACRFGQVPDQLGGLRLFTVQIPHKRL 274
Query: 237 KR-GISYVQQWDVDSG-RLRLAREMKESLSALAVRDDGRFVAVGTMFTGSVFVYIAFSLQ 294
++ Y+ WD + LR E +S L+V D G F+ +GT+ TGSV +YIAFSLQ
Sbjct: 275 RQPPPCYLTAWDSSTFLPLRTRSCGHEVISCLSVSDSGTFLGLGTV-TGSVAIYIAFSLQ 333
>sp|Q9WTV0|PREB_RAT Prolactin regulatory element-binding protein OS=Rattus norvegicus
GN=Preb PE=2 SV=2
Length = 417
Score = 128 bits (321), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 82/240 (34%), Positives = 127/240 (52%), Gaps = 13/240 (5%)
Query: 63 KQKGGKKEKSNEKGKNKKDKIEDPPIL--NSIDSKEKNLRFGFKTFDSVQTVFAGSESLQ 120
+QKG K EKS K + + + P + + + + K ++VQT F+ +E LQ
Sbjct: 99 QQKGSKAEKSGSKEQGPRQRKGAAPAEKKSGAEVHPEGVELKVKNLEAVQTDFS-TEPLQ 157
Query: 121 RVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAKD 180
+VV + + L+ TGG+DGH+R+W P ++ +L +AH EI D+ G ++V++ D
Sbjct: 158 KVVCFNHDNTLLATGGSDGHVRVWKVPSLEKVLEFKAHEGEIGDLALGPDG-KLVTVGWD 216
Query: 181 GKAFVWNSKNGSLSKELKWN----TPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQN 236
KA VW L +L+W T N Y ++ CR+G V D P RLFT+ P +
Sbjct: 217 FKASVWQKDQ--LVTQLQWQENGPTSSNTPYRYQACRFGQVPDQPGGLRLFTVQIPHKRL 274
Query: 237 KR-GISYVQQWDVDSGRLRLAREM-KESLSALAVRDDGRFVAVGTMFTGSVFVYIAFSLQ 294
++ Y+ WD + R E +S L V + G F+ +GT+ TGSV +YIAFSLQ
Sbjct: 275 RQPPPCYLTAWDSSTFLPLQTRSCGHEVISCLTVSESGTFLGLGTV-TGSVAIYIAFSLQ 333
>sp|Q9HCU5|PREB_HUMAN Prolactin regulatory element-binding protein OS=Homo sapiens
GN=PREB PE=1 SV=2
Length = 417
Score = 124 bits (310), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/240 (33%), Positives = 130/240 (54%), Gaps = 13/240 (5%)
Query: 63 KQKGGKKEKSNEKGKNKKDKIEDPPILNSI--DSKEKNLRFGFKTFDSVQTVFAGSESLQ 120
+Q+G K EK+ K + + + P +++ + L + +VQT F+ S+ LQ
Sbjct: 99 QQQGNKAEKAGSKEQGPRQRKGAAPAEKKCGAETQHEGLELRVENLQAVQTDFS-SDPLQ 157
Query: 121 RVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAKD 180
+VV + + L+ TGGTDG++R+W P ++ +L +AH EI+D+ G ++V++ +D
Sbjct: 158 KVVCFNHDNTLLATGGTDGYVRVWKVPSLEKVLEFKAHEGEIEDLALGPDG-KLVTVGRD 216
Query: 181 GKAFVWNSKNGSLSKELKW--NTP--DNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQN 236
KA VW L +L W N P + Y ++ CR+G V D P RLFT+ P +
Sbjct: 217 LKASVWQKDQ--LVTQLHWQENGPTFSSTPYRYQACRFGQVPDQPAGLRLFTVQIPHKRL 274
Query: 237 KR-GISYVQQWDVDSG-RLRLAREMKESLSALAVRDDGRFVAVGTMFTGSVFVYIAFSLQ 294
++ Y+ WD + LR E +S L V + G F+ +GT+ TGSV +YIAFSLQ
Sbjct: 275 RQPPPCYLTAWDGSNFLPLRTKSCGHEVVSCLDVSESGTFLGLGTV-TGSVAIYIAFSLQ 333
>sp|Q8GYE0|PHF1_ARATH SEC12-like protein 1 OS=Arabidopsis thaliana GN=PHF1 PE=2 SV=2
Length = 398
Score = 61.6 bits (148), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 80/161 (49%), Gaps = 13/161 (8%)
Query: 119 LQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIA 178
LQ+ + S +G + GG DG LR+ +P + +L K I D+DFS+ E + + +
Sbjct: 124 LQKCMAFSFDGSKLAVGGVDGCLRIMEWPNLSVILDEPKAHKSIRDMDFSLDSEFLATTS 183
Query: 179 KDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKR 238
DG A +W +++G L+ + +NI+ CR+ S ++ F A +
Sbjct: 184 TDGSARIWKAEDGFPLSTLERSGDENIEL----CRF-----SKDGTKPFLFC---AAQRG 231
Query: 239 GISYVQQWDVDSG-RLRLAREMKESLSALAVRDDGRFVAVG 278
V +D+ + +L + +++ S +AV DG+++A+G
Sbjct: 232 DTPMVNVYDISTWKKLGFKKLSRKTASTMAVSLDGKYIALG 272
>sp|P49695|PKWA_THECU Probable serine/threonine-protein kinase PkwA OS=Thermomonospora
curvata GN=pkwA PE=3 SV=1
Length = 742
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 72/160 (45%), Gaps = 19/160 (11%)
Query: 121 RVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAKD 180
R V S +G L+ +G D +RLW + E H+ + D+ FS G + S ++D
Sbjct: 505 RAVAFSPDGALLASGSDDATVRLWDVAAAEERAVFEGHTHYVLDIAFSPDGSMVASGSRD 564
Query: 181 GKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGI 240
G A +WN G+ LK +T Y++ V SP S +A R
Sbjct: 565 GTARLWNVATGTEHAVLKGHT----DYVYA------VAFSPDGSM-------VASGSRD- 606
Query: 241 SYVQQWDVDSGRLR-LAREMKESLSALAVRDDGRFVAVGT 279
++ WDV +G+ R + + E++ +LA DG + G+
Sbjct: 607 GTIRLWDVATGKERDVLQAPAENVVSLAFSPDGSMLVHGS 646
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 34/74 (45%)
Query: 113 FAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGE 172
F G R V S +G L+ +G D +RLW + +E H++ + V F G
Sbjct: 664 FEGHTDWVRAVAFSPDGALLASGSDDRTIRLWDVAAQEEHTTLEGHTEPVHSVAFHPEGT 723
Query: 173 QIVSIAKDGKAFVW 186
+ S ++DG +W
Sbjct: 724 TLASASEDGTIRIW 737
Score = 41.6 bits (96), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 67/171 (39%), Gaps = 20/171 (11%)
Query: 110 QTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSI 169
+ VF G + S +G ++ +G DG RLW+ ++ H+ + V FS
Sbjct: 536 RAVFEGHTHYVLDIAFSPDGSMVASGSRDGTARLWNVATGTEHAVLKGHTDYVYAVAFSP 595
Query: 170 SGEQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTL 229
G + S ++DG +W+ G L+ + + F SP S L
Sbjct: 596 DGSMVASGSRDGTIRLWDVATGKERDVLQAPAENVVSLAF----------SPDGSMLVHG 645
Query: 230 ANPLAQNKRGISYVQQWDVDSGR-LRLAREMKESLSALAVRDDGRFVAVGT 279
++ S V WDV SG L + + A+A DG +A G+
Sbjct: 646 SD---------STVHLWDVASGEALHTFEGHTDWVRAVAFSPDGALLASGS 687
>sp|P87060|POP1_SCHPO WD repeat-containing protein pop1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=pop1 PE=1 SV=1
Length = 775
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 60/117 (51%), Gaps = 5/117 (4%)
Query: 83 IEDPPILNSIDSKEKNLRFGFKTFDS--VQTVFAGSESLQRVVRLSRNGDLMVTGGTDGH 140
++DPP +N ++ ++N F T + ++T+ ++S++ V L GDL+V+ DG
Sbjct: 542 LDDPPFVNVNENPDQNNDFTSATTNPFYIRTLRGHTDSVREVACL---GDLIVSASYDGT 598
Query: 141 LRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAKDGKAFVWNSKNGSLSKEL 197
LR+W L + H + V + S +Q +S D K +WN ++G L + L
Sbjct: 599 LRVWKASTGVCLHVLRGHVGRVYSVTINPSRQQCISAGTDAKIRIWNLESGELLQTL 655
Score = 33.9 bits (76), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 48/121 (39%), Gaps = 22/121 (18%)
Query: 133 VTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAKDGKAFVWNSKNGS 192
++ GTD +R+W+ + L + HS + V F+ + S D VW+ GS
Sbjct: 633 ISAGTDAKIRIWNLESGELLQTLHGHSNLVSQVTFNQNILVSASAPPDTSLRVWDLNTGS 692
Query: 193 LSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSGR 252
LK C G + S++ + ++ S +Q WD+ SG+
Sbjct: 693 CRDILK-------------CPLGHIFFQHDESKVVSGSH---------STLQLWDIRSGK 730
Query: 253 L 253
L
Sbjct: 731 L 731
>sp|Q6L4F8|GBLPB_ORYSJ Guanine nucleotide-binding protein subunit beta-like protein B
OS=Oryza sativa subsp. japonica GN=RACK1B PE=1 SV=1
Length = 336
Score = 51.6 bits (122), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 84/207 (40%), Gaps = 36/207 (17%)
Query: 83 IEDPPILNSIDSKEKNLRFGFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLR 142
I +P + D + +G S + + S +Q VV LS +G ++G DG LR
Sbjct: 47 ITNPSTAVATDPEAAPPEYGV----SYRRLTGHSHFVQDVV-LSSDGQFALSGSWDGELR 101
Query: 143 LWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAKDGKAFVWNSKNGSLSKELKWNTP 202
LW + H+K++ V FS+ QIVS A+D +WN+
Sbjct: 102 LWDLATGRTTRRFVGHTKDVLSVAFSVDNRQIVSAARDNTIKLWNT-------------- 147
Query: 203 DNIKYLFKRCRYGLVED-------SPKRSRLFTLANPLAQNKRGISY---VQQWDVDSGR 252
C+Y + D + S + NP+A S+ V+ W++ + +
Sbjct: 148 ------LGECKYTIGGDHGAGEGHTGWVSCVRFSPNPMAPTIVSGSWDRSVKVWNLTNCK 201
Query: 253 LRLAREMKES-LSALAVRDDGRFVAVG 278
LR E ++A+AV DG A G
Sbjct: 202 LRTKLEGHNGYVNAVAVSPDGSLCASG 228
Score = 34.7 bits (78), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 36/85 (42%), Gaps = 2/85 (2%)
Query: 115 GSESLQRVVRLSRN--GDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGE 172
G VR S N +V+G D +++W+ K +E H+ ++ V S G
Sbjct: 164 GHTGWVSCVRFSPNPMAPTIVSGSWDRSVKVWNLTNCKLRTKLEGHNGYVNAVAVSPDGS 223
Query: 173 QIVSIAKDGKAFVWNSKNGSLSKEL 197
S KDG +W+ G + +L
Sbjct: 224 LCASGGKDGTTLLWDLTEGKMLYKL 248
>sp|Q05B30|WDR91_XENTR WD repeat-containing protein 91 OS=Xenopus tropicalis GN=wdr91 PE=2
SV=1
Length = 751
Score = 51.6 bits (122), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 4/107 (3%)
Query: 125 LSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAKDGKAF 184
+ NG+L+VTG DG +RL+ + + L +AH E+ VDFS + SI +DGK
Sbjct: 574 FNHNGNLLVTGAADGFIRLFDMQQHQCALSWKAHMGEVYSVDFSYDENAVYSIGEDGKFI 633
Query: 185 VWN-SKNGSLSKELKWNTPDNIKYLFKRCRY-GLVEDSPKRSRLFTL 229
W+ K+G K +++ P + F Y G + R RLF
Sbjct: 634 QWDIHKSG--QKVSEYSLPSDATGPFMLSGYSGYKQVQFPRGRLFAF 678
>sp|Q6TEN6|WDR91_DANRE WD repeat-containing protein 91 OS=Danio rerio GN=wdr91 PE=1 SV=2
Length = 724
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 125 LSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAKDGKAF 184
+ NG+L+VTG DG +RL+ + + L +AH E+ V+FS + SI +DGK
Sbjct: 547 FNHNGNLLVTGAADGIIRLFDMQRYESALSWKAHDGEVYSVEFSYDENTVFSIGEDGKFV 606
Query: 185 VWN 187
WN
Sbjct: 607 QWN 609
>sp|Q39221|STLP2_ARATH SEC12-like protein 2 OS=Arabidopsis thaliana GN=STL2P PE=1 SV=4
Length = 393
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 84/180 (46%), Gaps = 22/180 (12%)
Query: 120 QRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAK 179
Q + + G ++ G DG LR++ +P M LL+ + + FS SG+ +VS+
Sbjct: 156 QLALAFNPEGSVLAAGAEDGTLRVFKWPSMNTLLNESQAHSSVKCLTFSESGQFLVSLGG 215
Query: 180 DGKAFVWN----SKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQ 235
VW+ + SLSKE +F CR+ + DS L+ AN
Sbjct: 216 P-VCRVWDVNASAAVASLSKEK--------DEMFASCRFSV--DSAGNEVLYIAAN---- 260
Query: 236 NKRGISYVQQWDVDSGRLRLAREMKE-SLSALAVRDDGRFVAVGTMFTGSVFVYIAFSLQ 294
+RG S + D + + ++ +K+ S+SA V DG+ +A+GT+ G V + + +Q
Sbjct: 261 TERGGSIITC-DTKLWKRKWSKPIKKNSISAFNVSADGKLLAIGTL-EGDVLILESTRMQ 318
>sp|Q6DH44|WDR83_DANRE WD repeat domain-containing protein 83 OS=Danio rerio GN=wdr83 PE=2
SV=1
Length = 315
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 42/78 (53%)
Query: 121 RVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAKD 180
R VR + +G+ ++T G+D L+LWS + L H E+ D D S Q+ S + D
Sbjct: 29 RAVRFNADGNYLLTCGSDKSLKLWSVSRGTLLKTYSGHGYEVLDADGSYDNSQLCSCSSD 88
Query: 181 GKAFVWNSKNGSLSKELK 198
+W+ +G ++++L+
Sbjct: 89 KTVILWDVASGQVTRKLR 106
>sp|Q2HJE1|WDR91_BOVIN WD repeat-containing protein 91 OS=Bos taurus GN=WDR91 PE=2 SV=2
Length = 746
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 2/106 (1%)
Query: 125 LSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAKDGKAF 184
+ NG+L+VTG DG +RL+ + + + +AH E+ V+FS + SI +DGK
Sbjct: 569 FNHNGNLLVTGAADGVIRLFDMQQHECAMSWKAHCGEVYSVEFSYDENTVYSIGEDGKFI 628
Query: 185 VWNSKNGSLSKELKWNTPDNIKYLFKRCRY-GLVEDSPKRSRLFTL 229
WN L K ++ P + F Y G + R RLF
Sbjct: 629 QWNIHKSGL-KVSEYGLPADATGPFVLSGYSGYKQVQVPRGRLFAF 673
>sp|A4D1P6|WDR91_HUMAN WD repeat-containing protein 91 OS=Homo sapiens GN=WDR91 PE=1 SV=2
Length = 747
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 2/106 (1%)
Query: 125 LSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAKDGKAF 184
+ NG+L+VTG DG +RL+ + + + AH E+ V+FS + SI +DGK
Sbjct: 570 FNHNGNLLVTGAADGVIRLFDMQQHECAMSWRAHYGEVYSVEFSYDENTVYSIGEDGKFI 629
Query: 185 VWNSKNGSLSKELKWNTPDNIKYLFKRCRY-GLVEDSPKRSRLFTL 229
WN L K +++ P + F Y G + R RLF
Sbjct: 630 QWNIHKSGL-KVSEYSLPSDATGPFVLSGYSGYKQVQVPRGRLFAF 674
>sp|Q5R6T6|WDR91_PONAB WD repeat-containing protein 91 OS=Pongo abelii GN=WDR91 PE=2 SV=1
Length = 712
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 2/106 (1%)
Query: 125 LSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAKDGKAF 184
+ NG+L+VTG DG +RL+ + + + AH E+ V+FS + SI +DGK
Sbjct: 535 FNHNGNLLVTGAADGVIRLFDMQQHECAMSWRAHYGEVYSVEFSYDENTVYSIGEDGKFI 594
Query: 185 VWNSKNGSLSKELKWNTPDNIKYLFKRCRY-GLVEDSPKRSRLFTL 229
WN L K +++ P + F Y G + R RLF
Sbjct: 595 QWNIHKSGL-KVSEYSLPSDATGPFVLSGYSGYKQVQVPRGRLFAF 639
>sp|O75529|TAF5L_HUMAN TAF5-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 5L OS=Homo sapiens GN=TAF5L PE=1
SV=1
Length = 589
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 54/106 (50%), Gaps = 1/106 (0%)
Query: 112 VFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISG 171
++AG + V+ N + + TG TD +RLWS + + H + + FS +G
Sbjct: 421 IYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNG 480
Query: 172 EQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLV 217
+ + S +D + +W+ +G+L KEL+ +T DNI L GL+
Sbjct: 481 KYLASAGEDQRLKLWDLASGTLYKELRGHT-DNITSLTFSPDSGLI 525
Score = 36.6 bits (83), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 32/83 (38%)
Query: 112 VFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISG 171
+F G + S NG + + G D L+LW + H+ I + FS
Sbjct: 463 LFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDS 522
Query: 172 EQIVSIAKDGKAFVWNSKNGSLS 194
I S + D VW+ +N S
Sbjct: 523 GLIASASMDNSVRVWDIRNTYCS 545
Score = 35.0 bits (79), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 28/60 (46%)
Query: 132 MVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAKDGKAFVWNSKNG 191
+G D RLWSF + PL H ++D V F + + + + D +W+++ G
Sbjct: 399 FASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQG 458
>sp|P74442|Y143_SYNY3 Uncharacterized WD repeat-containing protein slr0143
OS=Synechocystis sp. (strain PCC 6803 / Kazusa)
GN=slr0143 PE=4 SV=1
Length = 1191
Score = 49.7 bits (117), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 38/65 (58%)
Query: 123 VRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAKDGK 182
V S +G+++ + D +RLW + K L + H+K +DD FS G+ +VS+ +DG+
Sbjct: 648 VSFSPDGEILASTSRDRTVRLWHWRSGKTLAVLGGHTKSVDDAQFSPDGQTLVSVCRDGQ 707
Query: 183 AFVWN 187
+W+
Sbjct: 708 IRLWD 712
Score = 38.5 bits (88), Expect = 0.065, Method: Composition-based stats.
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 128 NGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAKDGKAFVWN 187
NG+L+ DG +RLW+ P+ + + H + + V F+ G+Q+ S + +G W+
Sbjct: 736 NGNLLAVAADDGTVRLWT-PQGEIKATLSGHDEFVTRVVFTPDGKQLFSSSSNGSVIHWS 794
Query: 188 SKNGSLSK 195
+ L K
Sbjct: 795 TSGKMLKK 802
Score = 37.0 bits (84), Expect = 0.19, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 110 QTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSI 169
+ V G V +S + +L+ + DG + LW+ P+ + L H+ I VDFS
Sbjct: 553 KNVLTGHRDGVTSVAISSHKNLIASASRDGTVHLWT-PQGEFLREFTGHTGSIYRVDFSP 611
Query: 170 SGEQIVSIAKDGKAFVWNSKNGSLSKELK 198
+G+ + +D +W+ +G+L + LK
Sbjct: 612 NGKIFATAGQDQTVKIWD-LDGNLLQTLK 639
Score = 36.2 bits (82), Expect = 0.27, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Query: 113 FAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGE 172
F G V S NG + T G D +++W L ++ H + V FS GE
Sbjct: 597 FTGHTGSIYRVDFSPNGKIFATAGQDQTVKIWDLDG-NLLQTLKGHQDSVYSVSFSPDGE 655
Query: 173 QIVSIAKDGKAFVWNSKNG 191
+ S ++D +W+ ++G
Sbjct: 656 ILASTSRDRTVRLWHWRSG 674
Score = 34.7 bits (78), Expect = 0.84, Method: Composition-based stats.
Identities = 27/114 (23%), Positives = 55/114 (48%), Gaps = 7/114 (6%)
Query: 87 PILNSIDSKEKNLRFGFKTFDS--VQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLW 144
P L + + ++ FD ++++ A + L ++ + S NG +++ G +G ++W
Sbjct: 1007 PTLPQLAAGDEQGNLTLWNFDGTLIRSIVAHGDRLNQL-QYSPNGKYLLSAGREGTAKIW 1065
Query: 145 SFPKMKPLLH-IEAHSKEIDDVDFSISGEQIVSIAKDGKAFVWNSKNGSLSKEL 197
S LLH +++ ID + S + I + A DG +W+ + G+L E
Sbjct: 1066 SVEGQ--LLHTLKSDPLPIDQIAISPDSQWIATAASDGMVRLWD-QQGNLRGEF 1116
Score = 34.3 bits (77), Expect = 1.3, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 121 RVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAKD 180
R V L + G G+L LW+F + I AH ++ + +S +G+ ++S ++
Sbjct: 1001 RSVSLHPTLPQLAAGDEQGNLTLWNFDGTL-IRSIVAHGDRLNQLQYSPNGKYLLSAGRE 1059
Query: 181 GKAFVWNSKNGSLSKELK 198
G A +W S G L LK
Sbjct: 1060 GTAKIW-SVEGQLLHTLK 1076
>sp|Q55FJ2|WDR91_DICDI WD repeat-containing protein 91 homolog OS=Dictyostelium discoideum
GN=wdr91 PE=4 SV=1
Length = 766
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 33/59 (55%)
Query: 129 GDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAKDGKAFVWN 187
G L+ TG DG +R++ P+ +AHS EI V FS ++ S+ KDGK + WN
Sbjct: 608 GTLLSTGCVDGTIRIFDIKSGSPIAGWQAHSNEILSVQFSSDENRLYSLGKDGKLYQWN 666
>sp|Q5ZLL7|WDR91_CHICK WD repeat-containing protein 91 OS=Gallus gallus GN=WDR91 PE=2 SV=1
Length = 751
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%)
Query: 125 LSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAKDGKAF 184
+ NG+L+VTG DG +RL+ + + + +AH E+ V+FS + SI +DGK
Sbjct: 574 FNHNGNLLVTGAADGIVRLFDMQQHECAMSWKAHDGEVYSVEFSYDENTVYSIGEDGKFI 633
Query: 185 VWN 187
WN
Sbjct: 634 QWN 636
>sp|B2RYI0|WDR91_RAT WD repeat-containing protein 91 OS=Rattus norvegicus GN=Wdr91 PE=2
SV=1
Length = 747
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 2/106 (1%)
Query: 125 LSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAKDGKAF 184
+ NG+L+VTG DG +RL+ + + +AH E+ V+FS + SI +DGK
Sbjct: 570 FNHNGNLLVTGAADGVIRLFDMQQHGCAMSWKAHCGEVYSVEFSYDENAVNSIGEDGKFI 629
Query: 185 VWNSKNGSLSKELKWNTPDNIKYLFKRCRY-GLVEDSPKRSRLFTL 229
WN L K +++ P + F Y G + R RLF
Sbjct: 630 QWNIHKSGL-KVSEYSLPSDATGPFVLSGYSGYKQVQVPRGRLFAF 674
>sp|Q3Y8L7|WDR69_CHLRE Outer row dynein assembly protein 16 OS=Chlamydomonas reinhardtii
GN=ODA16 PE=1 SV=1
Length = 446
Score = 48.5 bits (114), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 73/169 (43%), Gaps = 19/169 (11%)
Query: 112 VFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISG 171
V +G + + G L+V+G D RLW + L + H+ E+ DV F +G
Sbjct: 258 VLSGHRGEVSSTQFNYAGTLVVSGSIDCTSRLWDVRSGRCLSVKQGHTDEVLDVAFDAAG 317
Query: 172 EQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLAN 231
++VS + DG A ++++ G L + + K F +P+ +RL T ++
Sbjct: 318 TKMVSASADGSARLYHTLTGVCQHTLVGHEGEISKVAF----------NPQGTRLITASS 367
Query: 232 PLAQNKRGISYVQQWDVDSGR-LRLAREMKESLSALAVRDDGRFVAVGT 279
+ WD D+G L++ + + + A +G F+ G+
Sbjct: 368 D--------KTCRLWDCDTGECLQVLEGHTDEIFSCAFNYEGDFIITGS 408
Score = 39.7 bits (91), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 36/84 (42%)
Query: 109 VQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFS 168
Q G E V + G ++T +D RLW + L +E H+ EI F+
Sbjct: 339 CQHTLVGHEGEISKVAFNPQGTRLITASSDKTCRLWDCDTGECLQVLEGHTDEIFSCAFN 398
Query: 169 ISGEQIVSIAKDGKAFVWNSKNGS 192
G+ I++ +KD +W + S
Sbjct: 399 YEGDFIITGSKDNTCRIWKALTAS 422
Score = 32.0 bits (71), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 125 LSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDF-SISGEQIVSIAKDGKA 183
+++GD +TG D ++W+ + + +E H + + F + G++IV+ + D
Sbjct: 102 FNKSGDRFITGSYDRTCKVWNTFTGEEVFTLEGHKNVVYAIAFNNPYGDKIVTGSFDKTC 161
Query: 184 FVWNSKNGSLSKELK 198
+W++ G L LK
Sbjct: 162 KLWDAYTGQLYYTLK 176
Score = 31.6 bits (70), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Query: 122 VVRLSRN--GDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAK 179
+V LS N ++ TG D +LW + + H EI + F+ G+ IV+ +
Sbjct: 182 IVCLSFNPQSTIIATGSMDNTAKLWDVETGQERATLAGHRAEIVSLGFNTGGDLIVTGSF 241
Query: 180 DGKAFVWNSKNG 191
D + +W+ + G
Sbjct: 242 DHDSRLWDVRTG 253
>sp|Q8YTC2|Y2800_NOSS1 Uncharacterized WD repeat-containing protein alr2800 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr2800 PE=4 SV=1
Length = 1258
Score = 48.5 bits (114), Expect = 6e-05, Method: Composition-based stats.
Identities = 42/166 (25%), Positives = 77/166 (46%), Gaps = 19/166 (11%)
Query: 115 GSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQI 174
G + R V S +G+++ + G D +++LWS + + H E+ V F GE +
Sbjct: 682 GHSNWVRFVVFSPDGEILASCGADENVKLWSVRDGVCIKTLTGHEHEVFSVAFHPDGETL 741
Query: 175 VSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLA 234
S + D +W+ ++G+ + L +T + RC V SP + TLA+ A
Sbjct: 742 ASASGDKTIKLWDIQDGTCLQTLTGHTD------WVRC----VAFSPDGN---TLASSAA 788
Query: 235 QNKRGISYVQQWDVDSGR-LRLAREMKESLSALAVRDDGRFVAVGT 279
+ ++ WDV G+ LR + + ++A DG+ +A G+
Sbjct: 789 DHT-----IKLWDVSQGKCLRTLKSHTGWVRSVAFSADGQTLASGS 829
Score = 43.1 bits (100), Expect = 0.002, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 34/73 (46%)
Query: 125 LSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAKDGKAF 184
S G L+ T TD H+R+W K LL HS + V FS GE + S D
Sbjct: 650 FSPEGQLLATCDTDCHVRVWEVKSGKLLLICRGHSNWVRFVVFSPDGEILASCGADENVK 709
Query: 185 VWNSKNGSLSKEL 197
+W+ ++G K L
Sbjct: 710 LWSVRDGVCIKTL 722
Score = 40.4 bits (93), Expect = 0.017, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 35/67 (52%)
Query: 125 LSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAKDGKAF 184
S NG+++ T TD +++W + + K L + H+ + D+ FS G+ + S + D
Sbjct: 1112 FSPNGEIIATCSTDQTVKIWDWQQGKCLKTLTGHTNWVFDIAFSPDGKILASASHDQTVR 1171
Query: 185 VWNSKNG 191
+W+ G
Sbjct: 1172 IWDVNTG 1178
Score = 38.9 bits (89), Expect = 0.043, Method: Composition-based stats.
Identities = 32/152 (21%), Positives = 62/152 (40%), Gaps = 19/152 (12%)
Query: 101 FGFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSK 160
+ + T + ++T + S+ + S + ++V+G D ++LW + + H+
Sbjct: 837 WNYHTGECLKTYIGHTNSVYSIA-YSPDSKILVSGSGDRTIKLWDCQTHICIKTLHGHTN 895
Query: 161 EIDDVDFSISGEQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDS 220
E+ V FS G+ + ++ D +WN + G K NT + F S
Sbjct: 896 EVCSVAFSPDGQTLACVSLDQSVRLWNCRTGQCLKAWYGNTDWALPVAF----------S 945
Query: 221 PKRSRLFTLANPLAQNKRGISYVQQWDVDSGR 252
P R L + +N V+ WD +G+
Sbjct: 946 PDRQILASGSND--------KTVKLWDWQTGK 969
Score = 38.5 bits (88), Expect = 0.052, Method: Composition-based stats.
Identities = 36/155 (23%), Positives = 66/155 (42%), Gaps = 19/155 (12%)
Query: 126 SRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAKDGKAFV 185
S +G L+ + D +RLW + + + HS + FS +GE I + + D +
Sbjct: 1071 SPDGQLLASASADQSVRLWDCCTGRCVGILRGHSNRVYSAIFSPNGEIIATCSTDQTVKI 1130
Query: 186 WNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQ 245
W+ + G K L +T ++F + SP L + ++ V+
Sbjct: 1131 WDWQQGKCLKTLTGHT----NWVFD------IAFSPDGKILASASHD--------QTVRI 1172
Query: 246 WDVDSGRL-RLAREMKESLSALAVRDDGRFVAVGT 279
WDV++G+ + +S++A DG VA G+
Sbjct: 1173 WDVNTGKCHHICIGHTHLVSSVAFSPDGEVVASGS 1207
Score = 35.8 bits (81), Expect = 0.36, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 32/69 (46%)
Query: 123 VRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAKDGK 182
V S + ++ +G D ++LW + K + +E H+ I + FS + + S + D
Sbjct: 942 VAFSPDRQILASGSNDKTVKLWDWQTGKYISSLEGHTDFIYGIAFSPDSQTLASASTDSS 1001
Query: 183 AFVWNSKNG 191
+WN G
Sbjct: 1002 VRLWNISTG 1010
Score = 34.7 bits (78), Expect = 0.83, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 34/76 (44%)
Query: 123 VRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAKDGK 182
+ S +G ++ + D +R+W K H+ + V FS GE + S ++D
Sbjct: 1152 IAFSPDGKILASASHDQTVRIWDVNTGKCHHICIGHTHLVSSVAFSPDGEVVASGSQDQT 1211
Query: 183 AFVWNSKNGSLSKELK 198
+WN K G + L+
Sbjct: 1212 VRIWNVKTGECLQILR 1227
Score = 32.3 bits (72), Expect = 4.0, Method: Composition-based stats.
Identities = 16/63 (25%), Positives = 31/63 (49%)
Query: 129 GDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAKDGKAFVWNS 188
G ++ TG D ++LW+ + L + HS +I + +S G+ + S + D +W+
Sbjct: 1032 GKIIATGSADCTVKLWNISTGQCLKTLSEHSDKILGMAWSPDGQLLASASADQSVRLWDC 1091
Query: 189 KNG 191
G
Sbjct: 1092 CTG 1094
>sp|Q91WQ5|TAF5L_MOUSE TAF5-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 5L OS=Mus musculus GN=Taf5l PE=2
SV=1
Length = 589
Score = 48.5 bits (114), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 54/106 (50%), Gaps = 1/106 (0%)
Query: 112 VFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISG 171
++AG + V+ N + + TG TD +RLWS + + H + + FS +G
Sbjct: 421 IYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNG 480
Query: 172 EQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLV 217
+ + S +D + +W+ +G+L KEL+ +T D+I L GL+
Sbjct: 481 KYLASAGEDQRLKLWDLASGTLFKELRGHT-DSITSLAFSPDSGLI 525
Score = 37.0 bits (84), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 59/150 (39%), Gaps = 19/150 (12%)
Query: 132 MVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAKDGKAFVWNSKNG 191
+G D RLWSF + PL H ++D V F + + + + D +W+++ G
Sbjct: 399 FASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQG 458
Query: 192 SLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSG 251
N LF R P S F+ + ++ WD+ SG
Sbjct: 459 ------------NSVRLFTGHR------GPVLSLSFSPNGKYLASAGEDQRLKLWDLASG 500
Query: 252 RL-RLAREMKESLSALAVRDDGRFVAVGTM 280
L + R +S+++LA D +A +M
Sbjct: 501 TLFKELRGHTDSITSLAFSPDSGLIASASM 530
Score = 35.0 bits (79), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 29/76 (38%)
Query: 112 VFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISG 171
+F G + S NG + + G D L+LW + H+ I + FS
Sbjct: 463 LFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSPDS 522
Query: 172 EQIVSIAKDGKAFVWN 187
I S + D VW+
Sbjct: 523 GLIASASMDNSVRVWD 538
>sp|Q9C4Z6|GPLPB_ARATH Guanine nucleotide-binding protein subunit beta-like protein B
OS=Arabidopsis thaliana GN=RACK1B PE=2 SV=1
Length = 326
Score = 48.1 bits (113), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 72/183 (39%), Gaps = 29/183 (15%)
Query: 104 KTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEID 163
K++ Q G + V LS +G ++G DG LRLW + H+K++
Sbjct: 50 KSYGVAQRRMTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVL 109
Query: 164 DVDFSISGEQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKR 223
V FS QIVS ++D +WN+ C+Y + E +
Sbjct: 110 SVAFSTDNRQIVSASRDRTIKLWNT--------------------LGECKYTISEADGHK 149
Query: 224 SRLFTL---ANPLAQNKRGISY---VQQWDVDSGRLR--LAREMKESLSALAVRDDGRFV 275
+ + N L S+ V+ W++ + +LR LA L+ +AV DG
Sbjct: 150 EWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNTLAGH-SGYLNTVAVSPDGSLC 208
Query: 276 AVG 278
A G
Sbjct: 209 ASG 211
Score = 37.0 bits (84), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 56/136 (41%), Gaps = 7/136 (5%)
Query: 111 TVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIE-----AHSKEIDDV 165
T+ A ++ + + N D++VT D + LW K + HS + DV
Sbjct: 10 TMCAHTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDV 69
Query: 166 DFSISGEQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSR 225
S G+ +S + DG+ +W+ G ++ +T D + F +V S R R
Sbjct: 70 VLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIV--SASRDR 127
Query: 226 LFTLANPLAQNKRGIS 241
L N L + K IS
Sbjct: 128 TIKLWNTLGECKYTIS 143
Score = 35.0 bits (79), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Query: 109 VQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFS 168
++ AG V +S +G L +GG DG + LW + K L +EA S I + FS
Sbjct: 185 LRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAGSI-IHSLCFS 243
Query: 169 ISGEQIVSIAKDGKAFVWNSKNGSLSKELK 198
+ + + A + +W+ ++ S+ ++LK
Sbjct: 244 PNRYWLCA-ATENSIRIWDLESKSVVEDLK 272
>sp|O14170|POP2_SCHPO WD repeat-containing protein pop2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=pop2 PE=1 SV=1
Length = 703
Score = 48.1 bits (113), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 56/124 (45%), Gaps = 14/124 (11%)
Query: 79 KKDKIEDPPIL----NSIDSKEKNLRFGFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVT 134
K K DPP L NSID EKN F V T+ ++S++ + S GD++V+
Sbjct: 473 KLPKNTDPPYLPDNTNSIDRWEKNPYF-------VHTLIGHTDSVRTI---SGYGDILVS 522
Query: 135 GGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAKDGKAFVWNSKNGSLS 194
G D +R+W + L H+ HS I V + +S + D VW+ G+
Sbjct: 523 GSYDSSIRIWRVSTGECLYHLRGHSLRIYSVLYEPERNICISGSMDKSIRVWDLSTGTCK 582
Query: 195 KELK 198
L+
Sbjct: 583 YVLE 586
>sp|P56094|TUP1_KLULA General transcriptional corepressor TUP1 OS=Kluyveromyces lactis
(strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
NRRL Y-1140 / WM37) GN=TUP1 PE=1 SV=2
Length = 682
Score = 48.1 bits (113), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 76/175 (43%), Gaps = 26/175 (14%)
Query: 114 AGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQ 173
A S+ R V S +G + TG D +R+W K ++ ++ H ++I +D+ SG +
Sbjct: 403 ASSDLYIRSVCFSPDGKFLATGAEDKLIRIWDLETKKIVMTLKGHEQDIYSLDYFPSGNK 462
Query: 174 IVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPL 233
+VS + D +W+ G+ S L + D + V SP + F A L
Sbjct: 463 LVSGSGDRTVRIWDLTTGTCS--LTLSIEDGVT---------TVAVSPGEGK-FIAAGSL 510
Query: 234 AQNKRGISYVQQWDVDSGRL--------RLAREMKESLSALAVRDDGRFVAVGTM 280
+ V+ WD D+G L L ++S+ ++ DG+ V G++
Sbjct: 511 DRT------VRVWDSDTGFLVERLDSENELGTGHRDSVYSVVFTRDGKGVVSGSL 559
>sp|Q39836|GBLP_SOYBN Guanine nucleotide-binding protein subunit beta-like protein
OS=Glycine max PE=2 SV=1
Length = 325
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 40/85 (47%)
Query: 104 KTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEID 163
KT+ + G + V LS +G ++G DG LRLW H+K++
Sbjct: 50 KTYGVPRRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAAGTSARRFVGHTKDVL 109
Query: 164 DVDFSISGEQIVSIAKDGKAFVWNS 188
V FSI QIVS ++D +WN+
Sbjct: 110 SVAFSIDNRQIVSASRDRTIKLWNT 134
Score = 37.7 bits (86), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 50/118 (42%), Gaps = 7/118 (5%)
Query: 128 NGDLMVTGGTDGHLRLWSFPKMK-----PLLHIEAHSKEIDDVDFSISGEQIVSIAKDGK 182
N D++VT D + LW K P + HS + DV S G+ +S + DG+
Sbjct: 27 NSDMIVTASRDRSIILWHLTKEDKTYGVPRRRLTGHSHFVQDVVLSSDGQFALSGSWDGE 86
Query: 183 AFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGI 240
+W+ G+ ++ +T D + F +V S R R L N L + K I
Sbjct: 87 LRLWDLAAGTSARRFVGHTKDVLSVAFSIDNRQIV--SASRDRTIKLWNTLGECKYTI 142
Score = 33.9 bits (76), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 56/113 (49%), Gaps = 4/113 (3%)
Query: 86 PPILNSIDSKEKNLRFGFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWS 145
P I+++ S ++ ++ T ++ AG V +S +G L +GG DG + LW
Sbjct: 164 PTIVSA--SWDRTVKVWNLTNCKLRNTLAGHNGYVNTVAVSPDGSLCASGGKDGVILLWD 221
Query: 146 FPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAKDGKAFVWNSKNGSLSKELK 198
+ K L ++A S I + FS S + + A + +W+ ++ S+ ++LK
Sbjct: 222 LAEGKRLYSLDAGSI-IHALCFSPSRYWLCA-ATEQSIKIWDLESKSIVEDLK 272
>sp|Q7TMQ7|WDR91_MOUSE WD repeat-containing protein 91 OS=Mus musculus GN=Wdr91 PE=1 SV=1
Length = 748
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 49/106 (46%), Gaps = 2/106 (1%)
Query: 125 LSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAKDGKAF 184
+ NG+L+VTG DG +RL+ + + + +AH E+ V+FS + SI +D K
Sbjct: 571 FNHNGNLLVTGAADGVIRLFDMQQHECAMSWKAHCGEVYSVEFSCDENAVYSIGEDRKFI 630
Query: 185 VWNSKNGSLSKELKWNTPDNIKYLFKRCRY-GLVEDSPKRSRLFTL 229
WN L K + N P + F Y G + R RLF
Sbjct: 631 QWNIHKSGL-KVSESNLPSDATGPFVLSGYSGYKQVQVPRGRLFAF 675
>sp|Q9FLX9|NLE1_ARATH Notchless protein homolog OS=Arabidopsis thaliana GN=NLE1 PE=2 SV=1
Length = 473
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 39/93 (41%)
Query: 101 FGFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSK 160
F + + AG V S +G + +G D +RLW PL + H
Sbjct: 93 FRIRPVNRCSQTIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKN 152
Query: 161 EIDDVDFSISGEQIVSIAKDGKAFVWNSKNGSL 193
+ V +S G+ +VS +K G+ WN K G L
Sbjct: 153 WVLTVAWSPDGKHLVSGSKSGEICCWNPKKGEL 185
Score = 39.3 bits (90), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 43/93 (46%)
Query: 94 SKEKNLRFGFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLL 153
S +K++R TVF G V S + L+++G D L++W K
Sbjct: 379 SFDKSVRLWNGITGQFVTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKKLKQ 438
Query: 154 HIEAHSKEIDDVDFSISGEQIVSIAKDGKAFVW 186
+ H+ E+ VD+S GE++VS KD +W
Sbjct: 439 DLPGHADEVFAVDWSPDGEKVVSGGKDRVLKLW 471
Score = 31.6 bits (70), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Query: 123 VRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAKDGK 182
V LS VT DG R+W K ++ + H+ + V + G I + ++D
Sbjct: 205 VHLSSPCRRFVTSSKDGDARIWDITLKKSIICLSGHTLAVTCVKWGGDG-IIYTGSQDCT 263
Query: 183 AFVWNSKNGSLSKELK 198
+W + G L +ELK
Sbjct: 264 IKMWETTQGKLIRELK 279
>sp|Q9LV28|GPLPC_ARATH Guanine nucleotide-binding protein subunit beta-like protein C
OS=Arabidopsis thaliana GN=RACK1C PE=2 SV=1
Length = 326
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 70/182 (38%), Gaps = 27/182 (14%)
Query: 104 KTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEID 163
K++ Q G V LS +G ++G DG LRLW + H+K++
Sbjct: 50 KSYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVL 109
Query: 164 DVDFSISGEQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKR 223
V FS QIVS ++D +WN+ C+Y + E +
Sbjct: 110 SVAFSTDNRQIVSASRDRTIKLWNT--------------------LGECKYTISEGDGHK 149
Query: 224 SRLFTL---ANPLAQNKRGISY---VQQWDVDSGRLRLAREMKES-LSALAVRDDGRFVA 276
+ + N L S+ V+ W++ + +LR + L+ +AV DG A
Sbjct: 150 EWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCA 209
Query: 277 VG 278
G
Sbjct: 210 SG 211
Score = 37.7 bits (86), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 50/119 (42%), Gaps = 7/119 (5%)
Query: 128 NGDLMVTGGTDGHLRLWSFPKMKPLL-----HIEAHSKEIDDVDFSISGEQIVSIAKDGK 182
N D++VT D + LW K + HS ++DV S G+ +S + DG+
Sbjct: 27 NSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGE 86
Query: 183 AFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGIS 241
+W+ G ++ +T D + F +V S R R L N L + K IS
Sbjct: 87 LRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIV--SASRDRTIKLWNTLGECKYTIS 143
Score = 32.7 bits (73), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Query: 113 FAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGE 172
G V +S +G L +GG DG + LW + K L +EA S I + FS +
Sbjct: 189 LVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAGSI-IHSLCFSPNRY 247
Query: 173 QIVSIAKDGKAFVWNSKNGSLSKELK 198
+ + A + +W+ ++ S+ ++LK
Sbjct: 248 WLCA-ATENSIRIWDLESKSVVEDLK 272
>sp|Q6CP71|PFS2_KLULA Polyadenylation factor subunit 2 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=PFS2 PE=3 SV=1
Length = 452
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
Query: 110 QTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLW--SFPKMKPLLHIEAHSKEIDDVDF 167
+++ +S V+ S GD MV+G DG L++W +F +K + +AH + + ++ F
Sbjct: 116 ESIMQAHDSAVTVMTYSHTGDWMVSGSADGELKIWQPNFNMVKVM--DQAHMECVREISF 173
Query: 168 SISGEQIVSIAKDGKAFVWNSKNGSLSKEL 197
S + ++ VS + D +WN NG + L
Sbjct: 174 SPTDQKFVSCSDDNVLKIWNFSNGQQERVL 203
>sp|Q55563|Y163_SYNY3 Uncharacterized WD repeat-containing protein sll0163 OS=Synechocystis
sp. (strain PCC 6803 / Kazusa) GN=sll0163 PE=4 SV=1
Length = 1693
Score = 47.0 bits (110), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 112 VFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISG 171
V G + L V S +G ++VT DG RLW + LL +E H + +FS G
Sbjct: 1583 VLYGHQGLVGTVDWSPDGQMLVTASNDGTARLWDLSG-RELLTLEGHGNWVRSAEFSPDG 1641
Query: 172 EQIVSIAKDGKAFVWNSK 189
+++ + DG A +W K
Sbjct: 1642 RWVLTSSADGTAKLWPVK 1659
Score = 45.1 bits (105), Expect = 6e-04, Method: Composition-based stats.
Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 2/101 (1%)
Query: 94 SKEKNLRFGFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLL 153
S++K R + T V A + R + S +G +VTG D +LW+ K L
Sbjct: 1361 SRDKTARL-WTTEGECVAVLADHQGWVREGQFSPDGQWIVTGSADKTAQLWNVLG-KKLT 1418
Query: 154 HIEAHSKEIDDVDFSISGEQIVSIAKDGKAFVWNSKNGSLS 194
+ H + +V FS + IV+ +KDG A VWN+ L+
Sbjct: 1419 VLRGHQDAVLNVRFSPDSQYIVTASKDGTARVWNNTGRELA 1459
Score = 42.7 bits (99), Expect = 0.003, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 124 RLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHI-EAHSKEIDDVDFSISGEQIVSIAKDGK 182
R S +G +VT TD RLW+ K LL I H KE+ D DFS G + +++ D
Sbjct: 1267 RFSLDGQKIVTYSTDNTARLWT--KEGTLLTILRGHQKEVYDADFSADGRFVFTVSADQT 1324
Query: 183 AFVWN 187
A W+
Sbjct: 1325 ARQWD 1329
Score = 42.4 bits (98), Expect = 0.004, Method: Composition-based stats.
Identities = 20/73 (27%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 115 GSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQI 174
G E R V S + +VT G D R+W+F + L + H+ + + +F+ G+ +
Sbjct: 1094 GHEDWVRSVHFSPHHQFLVTSGQDNTARIWNFAG-EQLTLCQGHADWVRNAEFNCHGQIL 1152
Query: 175 VSIAKDGKAFVWN 187
++ ++DG A +W+
Sbjct: 1153 LTASRDGTARLWD 1165
Score = 40.8 bits (94), Expect = 0.014, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 113 FAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGE 172
AG +S+ R S G+L+ T D RLW K + + H + VD+S G+
Sbjct: 1543 LAGHQSIVYQARFSPEGNLIATVSADHTARLWD-RSGKTVAVLYGHQGLVGTVDWSPDGQ 1601
Query: 173 QIVSIAKDGKAFVWN 187
+V+ + DG A +W+
Sbjct: 1602 MLVTASNDGTARLWD 1616
Score = 40.4 bits (93), Expect = 0.015, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 126 SRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAKDGKAFV 185
S +G ++T +DG R+WS K L + H I FS+ G++IV+ + D A +
Sbjct: 1228 SPDGQHIITSSSDGTARVWS-RHGKCLGTLRGHDHNIHGARFSLDGQKIVTYSTDNTARL 1286
Query: 186 WNSKNGSL 193
W +K G+L
Sbjct: 1287 W-TKEGTL 1293
Score = 39.3 bits (90), Expect = 0.031, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 115 GSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQI 174
G S R + S +G +VT DG RLW + ++ H +++ +S G+ I
Sbjct: 1176 GHTSWVRNAQFSPDGQWIVTCSADGTARLWDLSS-QCFAVLKGHQNWVNNALWSPDGQHI 1234
Query: 175 VSIAKDGKAFVWNSKNG 191
++ + DG A VW S++G
Sbjct: 1235 ITSSSDGTARVW-SRHG 1250
Score = 38.1 bits (87), Expect = 0.070, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Query: 111 TVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSIS 170
T+ G R + +G +++T DG RLW + L + H+ + + FS
Sbjct: 1131 TLCQGHADWVRNAEFNCHGQILLTASRDGTARLWDLEGREIGL-CQGHTSWVRNAQFSPD 1189
Query: 171 GEQIVSIAKDGKAFVWN 187
G+ IV+ + DG A +W+
Sbjct: 1190 GQWIVTCSADGTARLWD 1206
Score = 37.7 bits (86), Expect = 0.089, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Query: 111 TVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSIS 170
TV G + VR S + +VT DG R+W+ + L + + K I +FS
Sbjct: 1418 TVLRGHQDAVLNVRFSPDSQYIVTASKDGTARVWN-NTGRELAVLRHYEKNIFAAEFSAD 1476
Query: 171 GEQIVSIAKDGKAFVW 186
G+ IV+ + D A +W
Sbjct: 1477 GQFIVTASDDNTAGIW 1492
Score = 35.4 bits (80), Expect = 0.52, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Query: 115 GSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQI 174
G E + S + ++T D R+W F +PLL + H + FS G I
Sbjct: 1504 GHEGPVYFAQFSADSRYILTASVDNTARIWDFLG-RPLLTLAGHQSIVYQARFSPEGNLI 1562
Query: 175 VSIAKDGKAFVWNSKNGSLS 194
+++ D A +W+ +++
Sbjct: 1563 ATVSADHTARLWDRSGKTVA 1582
Score = 31.6 bits (70), Expect = 6.5, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Query: 108 SVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDF 167
++ T+ G + S +G + T D R W + K + + HS + + F
Sbjct: 1292 TLLTILRGHQKEVYDADFSADGRFVFTVSADQTARQWDISQ-KDTITLTGHSHWVRNAHF 1350
Query: 168 SISGEQIVSIAKDGKAFVWNSK 189
+ G++++++++D A +W ++
Sbjct: 1351 NPKGDRLLTVSRDKTARLWTTE 1372
>sp|Q6NVM2|KTNB1_XENTR Katanin p80 WD40 repeat-containing subunit B1 OS=Xenopus tropicalis
GN=katnb1 PE=2 SV=1
Length = 655
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 48/94 (51%)
Query: 104 KTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEID 163
KT +Q + A S+ VV +G L+ TGG D + LWS K ++ + H+ ++
Sbjct: 8 KTTWKLQEIVAHGSSVSSVVLGKSSGRLVATGGDDCRVNLWSVNKPNCIMSLTGHTTPVE 67
Query: 164 DVDFSISGEQIVSIAKDGKAFVWNSKNGSLSKEL 197
V F+ + E IV+ ++ G VW+ + + + L
Sbjct: 68 SVRFNNAEELIVAGSQSGSLRVWDLEAAKILRTL 101
Score = 35.4 bits (80), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 16/69 (23%), Positives = 34/69 (49%)
Query: 129 GDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAKDGKAFVWNS 188
GD + +G D +++LW + + + H++ + + FS G+ + S + D +W+
Sbjct: 117 GDFVASGSLDTNIKLWDVRRKGCVFRYKGHTQAVRCLRFSPDGKWLASASDDHSVKLWDL 176
Query: 189 KNGSLSKEL 197
G + EL
Sbjct: 177 TAGKMMAEL 185
Score = 34.7 bits (78), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 32/75 (42%)
Query: 113 FAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGE 172
G + VR + +L+V G G LR+W K L + H + +DF G+
Sbjct: 59 LTGHTTPVESVRFNNAEELIVAGSQSGSLRVWDLEAAKILRTLMGHKANVCSLDFHPYGD 118
Query: 173 QIVSIAKDGKAFVWN 187
+ S + D +W+
Sbjct: 119 FVASGSLDTNIKLWD 133
>sp|O24076|GBLP_MEDSA Guanine nucleotide-binding protein subunit beta-like protein
OS=Medicago sativa GN=GB1 PE=2 SV=1
Length = 325
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 40/85 (47%)
Query: 104 KTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEID 163
KT+ + G + V LS +G ++G DG LRLW H+K++
Sbjct: 50 KTYGVPRRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLNAGTSARRFVGHTKDVL 109
Query: 164 DVDFSISGEQIVSIAKDGKAFVWNS 188
V FSI QIVS ++D +WN+
Sbjct: 110 SVAFSIDNRQIVSASRDRTIKLWNT 134
Score = 37.7 bits (86), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 50/118 (42%), Gaps = 7/118 (5%)
Query: 128 NGDLMVTGGTDGHLRLWSFPKMK-----PLLHIEAHSKEIDDVDFSISGEQIVSIAKDGK 182
N D++VT D + LW K P + HS + DV S G+ +S + DG+
Sbjct: 27 NSDMIVTASRDKSIILWHLTKEDKTYGVPRRRLTGHSHFVQDVVLSSDGQFALSGSWDGE 86
Query: 183 AFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGI 240
+W+ G+ ++ +T D + F +V S R R L N L + K I
Sbjct: 87 LRLWDLNAGTSARRFVGHTKDVLSVAFSIDNRQIV--SASRDRTIKLWNTLGECKYTI 142
Score = 33.1 bits (74), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 56/113 (49%), Gaps = 4/113 (3%)
Query: 86 PPILNSIDSKEKNLRFGFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWS 145
P I+++ S ++ ++ T ++ AG V +S +G L +GG DG + LW
Sbjct: 164 PTIVSA--SWDRTVKVWNLTNCKLRNTLAGHSGYVNTVAVSPDGSLCASGGKDGVILLWD 221
Query: 146 FPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAKDGKAFVWNSKNGSLSKELK 198
+ K L ++A S I + FS + + + A + +W+ ++ S+ ++LK
Sbjct: 222 LAEGKRLYSLDAGSI-IHALCFSPNRYWLCA-ATESSIKIWDLESKSIVEDLK 272
>sp|O24456|GBLPA_ARATH Guanine nucleotide-binding protein subunit beta-like protein A
OS=Arabidopsis thaliana GN=RACK1A PE=1 SV=2
Length = 327
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 38/85 (44%)
Query: 104 KTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEID 163
K + Q G V LS +G ++G DG LRLW H+K++
Sbjct: 50 KAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVL 109
Query: 164 DVDFSISGEQIVSIAKDGKAFVWNS 188
V FS+ QIVS ++D +WN+
Sbjct: 110 SVAFSLDNRQIVSASRDRTIKLWNT 134
Score = 36.6 bits (83), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 73/158 (46%), Gaps = 13/158 (8%)
Query: 50 IVRKRKEKDKENAKQKGGKKEKSNEKGKNKKDKIE---------DPPILNSIDSKEKNLR 100
IV +++ + G K +E G+ +D + P I+++ S +K ++
Sbjct: 120 IVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSA--SWDKTVK 177
Query: 101 FGFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSK 160
+ +++ AG V +S +G L +GG DG + LW + K L +EA+S
Sbjct: 178 VWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANSV 237
Query: 161 EIDDVDFSISGEQIVSIAKDGKAFVWNSKNGSLSKELK 198
I + FS + + + + G +W+ ++ S+ ++LK
Sbjct: 238 -IHALCFSPNRYWLCAATEHGIK-IWDLESKSIVEDLK 273
Score = 35.0 bits (79), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 50/119 (42%), Gaps = 7/119 (5%)
Query: 128 NGDLMVTGGTDGHLRLWSFPKMKPLL-----HIEAHSKEIDDVDFSISGEQIVSIAKDGK 182
N D++V+ D + LW K + HS ++DV S G+ +S + DG+
Sbjct: 27 NADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGE 86
Query: 183 AFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGIS 241
+W+ G ++ +T D + F +V S R R L N L + K IS
Sbjct: 87 LRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIV--SASRDRTIKLWNTLGECKYTIS 143
>sp|Q8YRI1|YY46_NOSS1 Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr3466 PE=4 SV=1
Length = 1526
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 79/192 (41%), Gaps = 28/192 (14%)
Query: 89 LNSIDSKEKNLRFGFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPK 148
L ++ E NL + SV T GS V S +G L TG + G +R W
Sbjct: 845 LRCVNFTEANLAY------SVFTKILGS---VLTVAFSPDGKLFATGDSGGIVRFWEAAT 895
Query: 149 MKPLLHIEAHSKEIDDVDFSISGEQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYL 208
K LL + H+ ++ V FS G+ + S + D +W+ +G K K +T
Sbjct: 896 GKELLTCKGHNSWVNSVGFSQDGKMLASGSDDQTVRLWDISSGQCLKTFKGHT------- 948
Query: 209 FKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSGR-LRLAREMKESLSALA 267
S RS +F+ + + + V+ WD+ SG L + + + ++A
Sbjct: 949 -----------SRVRSVVFSPNSLMLASGSSDQTVRLWDISSGECLYIFQGHTGWVYSVA 997
Query: 268 VRDDGRFVAVGT 279
DG +A G+
Sbjct: 998 FNLDGSMLATGS 1009
Score = 42.0 bits (97), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 39/87 (44%)
Query: 112 VFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISG 171
+F G S R V S +G ++ +G D +RLW L ++ H+ + V FS G
Sbjct: 1027 IFQGHTSCVRSVVFSSDGAMLASGSDDQTVRLWDISSGNCLYTLQGHTSCVRSVVFSPDG 1086
Query: 172 EQIVSIAKDGKAFVWNSKNGSLSKELK 198
+ S D +W+ +G+ L+
Sbjct: 1087 AMLASGGDDQIVRLWDISSGNCLYTLQ 1113
Score = 40.0 bits (92), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 37/79 (46%)
Query: 113 FAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGE 172
F G + V S +G ++ +G D +RLWS K L ++ H+ + + FS G
Sbjct: 1364 FLGHTNWVGSVIFSPDGAILASGSGDQTVRLWSISSGKCLYTLQGHNNWVGSIVFSPDGT 1423
Query: 173 QIVSIAKDGKAFVWNSKNG 191
+ S + D +WN +G
Sbjct: 1424 LLASGSDDQTVRLWNISSG 1442
Score = 39.3 bits (90), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 35/76 (46%)
Query: 123 VRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAKDGK 182
+ S +G L+ +G D +RLW+ + L + H + V FS G + S + D
Sbjct: 1416 IVFSPDGTLLASGSDDQTVRLWNISSGECLYTLHGHINSVRSVAFSSDGLILASGSDDET 1475
Query: 183 AFVWNSKNGSLSKELK 198
+W+ K G K LK
Sbjct: 1476 IKLWDVKTGECIKTLK 1491
Score = 39.3 bits (90), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 66/169 (39%), Gaps = 21/169 (12%)
Query: 113 FAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGE 172
F G S V S +G ++ +G D +RLWS + L H+ + V FS G
Sbjct: 1322 FQGHTSWVSSVTFSPDGTMLASGSDDQTVRLWSISSGECLYTFLGHTNWVGSVIFSPDGA 1381
Query: 173 QIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLV-EDSPKRSRLFTLAN 231
+ S + D +W+ +G +C Y L ++ S +F+
Sbjct: 1382 ILASGSGDQTVRLWSISSG-------------------KCLYTLQGHNNWVGSIVFSPDG 1422
Query: 232 PLAQNKRGISYVQQWDVDSGR-LRLAREMKESLSALAVRDDGRFVAVGT 279
L + V+ W++ SG L S+ ++A DG +A G+
Sbjct: 1423 TLLASGSDDQTVRLWNISSGECLYTLHGHINSVRSVAFSSDGLILASGS 1471
Score = 39.3 bits (90), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 37/188 (19%), Positives = 70/188 (37%), Gaps = 21/188 (11%)
Query: 94 SKEKNLRFGFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLL 153
S +K +R + F G + V + +G ++ +G D +RLW K L
Sbjct: 1261 SSDKTVRLWDISSSKCLHTFQGHTNWVNSVAFNPDGSMLASGSGDQTVRLWEISSSKCLH 1320
Query: 154 HIEAHSKEIDDVDFSISGEQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCR 213
+ H+ + V FS G + S + D +W+ +G C
Sbjct: 1321 TFQGHTSWVSSVTFSPDGTMLASGSDDQTVRLWSISSG-------------------ECL 1361
Query: 214 YGLV-EDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSGR-LRLAREMKESLSALAVRDD 271
Y + + S +F+ + + G V+ W + SG+ L + + ++ D
Sbjct: 1362 YTFLGHTNWVGSVIFSPDGAILASGSGDQTVRLWSISSGKCLYTLQGHNNWVGSIVFSPD 1421
Query: 272 GRFVAVGT 279
G +A G+
Sbjct: 1422 GTLLASGS 1429
Score = 38.9 bits (89), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 53/141 (37%), Gaps = 20/141 (14%)
Query: 112 VFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISG 171
+F G V + +G ++ TG D +RLW + + H+ + V FS G
Sbjct: 985 IFQGHTGWVYSVAFNLDGSMLATGSGDQTVRLWDISSSQCFYIFQGHTSCVRSVVFSSDG 1044
Query: 172 EQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLV-EDSPKRSRLFTLA 230
+ S + D +W+ +G+ C Y L S RS +F+
Sbjct: 1045 AMLASGSDDQTVRLWDISSGN-------------------CLYTLQGHTSCVRSVVFSPD 1085
Query: 231 NPLAQNKRGISYVQQWDVDSG 251
+ + V+ WD+ SG
Sbjct: 1086 GAMLASGGDDQIVRLWDISSG 1106
Score = 38.1 bits (87), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 65/167 (38%), Gaps = 19/167 (11%)
Query: 113 FAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGE 172
F G S R V S N ++ +G +D +RLW + L + H+ + V F++ G
Sbjct: 944 FKGHTSRVRSVVFSPNSLMLASGSSDQTVRLWDISSGECLYIFQGHTGWVYSVAFNLDGS 1003
Query: 173 QIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANP 232
+ + + D +W+ + Y+F+ S RS +F+
Sbjct: 1004 MLATGSGDQTVRLWDISSS------------QCFYIFQG------HTSCVRSVVFSSDGA 1045
Query: 233 LAQNKRGISYVQQWDVDSGR-LRLAREMKESLSALAVRDDGRFVAVG 278
+ + V+ WD+ SG L + + ++ DG +A G
Sbjct: 1046 MLASGSDDQTVRLWDISSGNCLYTLQGHTSCVRSVVFSPDGAMLASG 1092
Score = 37.4 bits (85), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 34/74 (45%)
Query: 113 FAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGE 172
F G S V + +G ++ +G +D +RLW K L + H+ ++ V F+ G
Sbjct: 1238 FQGHTSWVNSVVFNPDGSMLASGSSDKTVRLWDISSSKCLHTFQGHTNWVNSVAFNPDGS 1297
Query: 173 QIVSIAKDGKAFVW 186
+ S + D +W
Sbjct: 1298 MLASGSGDQTVRLW 1311
>sp|Q4V7Y7|KTNB1_XENLA Katanin p80 WD40 repeat-containing subunit B1 OS=Xenopus laevis
GN=katnb1 PE=1 SV=1
Length = 655
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 48/94 (51%)
Query: 104 KTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEID 163
KT +Q + A S+ VV +G L+ TGG D + LWS K ++ + H+ ++
Sbjct: 8 KTTWKLQEIVAHGCSVSSVVLGRSSGRLVATGGDDCRVHLWSVNKPNCIMSLTGHTTPVE 67
Query: 164 DVDFSISGEQIVSIAKDGKAFVWNSKNGSLSKEL 197
V F+ S E IV+ ++ G +W+ + + + L
Sbjct: 68 SVRFNNSEELIVAGSQSGSLRIWDLEAAKILRTL 101
Score = 37.7 bits (86), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 33/75 (44%)
Query: 113 FAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGE 172
G + VR + + +L+V G G LR+W K L + H + +DF GE
Sbjct: 59 LTGHTTPVESVRFNNSEELIVAGSQSGSLRIWDLEAAKILRTLMGHKANVSSLDFHPYGE 118
Query: 173 QIVSIAKDGKAFVWN 187
+ S + D +W+
Sbjct: 119 FVASGSLDTNIKLWD 133
>sp|A2RRU3|UTP15_RAT U3 small nucleolar RNA-associated protein 15 homolog OS=Rattus
norvegicus GN=Utp15 PE=2 SV=1
Length = 528
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 56/120 (46%), Gaps = 4/120 (3%)
Query: 78 NKKDKIEDPPILNSIDSKEKNLRFGFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGT 137
+K D PP ++ + + +G + + V+T F+ + ++G L+V G
Sbjct: 42 SKVDFSPQPPYNYAVTASSRIHIYGRYSQEPVKT-FSRFKDTAYCATFRQDGQLLVAGSE 100
Query: 138 DGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAKDGKAFVWNSKNGSLSKEL 197
DG ++L+ PL E H+K + VDF+ +VS A D +W+ N SKE+
Sbjct: 101 DGVVQLFDISGRAPLRQFEGHTKAVHTVDFTADKYHVVSGADDYTVKLWDIPN---SKEI 157
>sp|Q5REE0|UTP15_PONAB U3 small nucleolar RNA-associated protein 15 homolog OS=Pongo
abelii GN=UTP15 PE=2 SV=1
Length = 518
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 57/120 (47%), Gaps = 4/120 (3%)
Query: 78 NKKDKIEDPPILNSIDSKEKNLRFGFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGT 137
+K D PP ++ + + +G + +S++T F+ + ++G L+V G
Sbjct: 42 SKVDFSPQPPYNYAVTASSRIHIYGRYSQESIKT-FSRFKDTAYCATFRQDGRLIVAGSE 100
Query: 138 DGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAKDGKAFVWNSKNGSLSKEL 197
DG ++L+ PL E H+K + VDF+ +VS A D +W+ N SKE+
Sbjct: 101 DGGVQLFDISGRAPLRQFEGHTKAVHTVDFTADKYHVVSGADDYTVKLWDIPN---SKEV 157
>sp|D3BUN1|LIS1_POLPA Lissencephaly-1 homolog OS=Polysphondylium pallidum PE=3 SV=1
Length = 417
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 55/123 (44%), Gaps = 2/123 (1%)
Query: 77 KNKKDKIEDPPILNSIDSKEKNLRFGFKTFDS--VQTVFAGSESLQRVVRLSRNGDLMVT 134
+N + + P+ + I S ++ FDS + G + + + ++G+L+ +
Sbjct: 104 RNCINAVRFHPLFSVIVSASEDATMRIWDFDSGDFERTLKGHTNAVQDIDFDKSGNLLAS 163
Query: 135 GGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAKDGKAFVWNSKNGSLS 194
D ++LW F + + H + V F SG+Q+VS ++D VW + G +
Sbjct: 164 CSADLTIKLWDFQSFDCIKTLHGHDHNVSCVRFLPSGDQLVSSSRDKSIKVWETATGYCT 223
Query: 195 KEL 197
K L
Sbjct: 224 KTL 226
>sp|Q6P2Y2|WDR69_XENTR Outer row dynein assembly protein 16 homolog OS=Xenopus tropicalis
GN=wdr69 PE=2 SV=1
Length = 415
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 40/87 (45%)
Query: 123 VRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAKDGK 182
V G L+ T DG R++S K L +E H EI + F+ G +I++ + D
Sbjct: 309 VTFDSTGQLVATASADGTARVYSASSRKCLAKLEGHEGEISKICFNAQGNRILTASSDKT 368
Query: 183 AFVWNSKNGSLSKELKWNTPDNIKYLF 209
+ +WN G + LK +T + F
Sbjct: 369 SRLWNPHTGECLQVLKGHTDEIFSCAF 395
Score = 37.7 bits (86), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Query: 122 VVRLSRN--GDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAK 179
++ LS N GD ++TG D + +W P + + + H EI F+ I + +
Sbjct: 222 IISLSFNTTGDRLITGSFDHTVSVWEIPSGRRIHTLIGHRGEISSAQFNWDCSLIATASM 281
Query: 180 DGKAFVWNSKNG 191
D +W+S NG
Sbjct: 282 DKSCKLWDSLNG 293
Score = 36.2 bits (82), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 31/61 (50%)
Query: 131 LMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAKDGKAFVWNSKN 190
L+ TG D +LW + L + H+ EI + F+ +G+++++ + D VW +
Sbjct: 191 LIATGSMDTTAKLWDIQSGEEALTLSGHAAEIISLSFNTTGDRLITGSFDHTVSVWEIPS 250
Query: 191 G 191
G
Sbjct: 251 G 251
Score = 34.3 bits (77), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 47/103 (45%), Gaps = 4/103 (3%)
Query: 131 LMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAKDGKAFVWNSKN 190
L+ T D +LW K + + H E+ DV F +G+ + + + DG A V+++ +
Sbjct: 275 LIATASMDKSCKLWDSLNGKCVATLTGHEDEVLDVTFDSTGQLVATASADGTARVYSASS 334
Query: 191 GSLSKELKWNTPDNIKYLF-KRCRYGLVEDSPKRSRLFTLANP 232
+L+ + + K F + L S K SRL+ NP
Sbjct: 335 RKCLAKLEGHEGEISKICFNAQGNRILTASSDKTSRLW---NP 374
Score = 32.3 bits (72), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 32/64 (50%)
Query: 123 VRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAKDGK 182
+ + G+ ++T +D RLW+ + L ++ H+ EI F+ G I++ +KD
Sbjct: 351 ICFNAQGNRILTASSDKTSRLWNPHTGECLQVLKGHTDEIFSCAFNYEGNTIITGSKDNT 410
Query: 183 AFVW 186
+W
Sbjct: 411 CRIW 414
Score = 31.6 bits (70), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 35/81 (43%)
Query: 129 GDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAKDGKAFVWNS 188
GD + TG D +LWS K H+ EI + F+ I + + D A +W+
Sbjct: 147 GDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLAFNPQSTLIATGSMDTTAKLWDI 206
Query: 189 KNGSLSKELKWNTPDNIKYLF 209
++G + L + + I F
Sbjct: 207 QSGEEALTLSGHAAEIISLSF 227
>sp|Q75AV4|PFS2_ASHGO Polyadenylation factor subunit 2 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=PSF2
PE=3 SV=1
Length = 449
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 49/90 (54%), Gaps = 4/90 (4%)
Query: 110 QTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLW--SFPKMKPLLHIEAHSKEIDDVDF 167
+++ +S V++ S GD +++G DG +++W +F +K L AH++ + D+ F
Sbjct: 114 ESIMQAHDSAVTVMQYSHAGDWLISGDADGTIKIWQPNFNMVKVL--DRAHTECMRDISF 171
Query: 168 SISGEQIVSIAKDGKAFVWNSKNGSLSKEL 197
S S ++ V+ + D +WN NG + L
Sbjct: 172 SYSDQKFVTCSDDNVLKIWNFSNGQQERVL 201
>sp|P16649|TUP1_YEAST General transcriptional corepressor TUP1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=TUP1 PE=1
SV=2
Length = 713
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 41/77 (53%)
Query: 121 RVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAKD 180
R V S +G + TG D +R+W K ++ ++ H ++I +D+ SG+++VS + D
Sbjct: 447 RSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGD 506
Query: 181 GKAFVWNSKNGSLSKEL 197
+W+ + G S L
Sbjct: 507 RTVRIWDLRTGQCSLTL 523
>sp|Q39336|GBLP_BRANA Guanine nucleotide-binding protein subunit beta-like protein
OS=Brassica napus GN=GB1 PE=2 SV=1
Length = 327
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 39/85 (45%)
Query: 104 KTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEID 163
K++ Q G V LS +G ++G DG LRLW H+K++
Sbjct: 50 KSYGVRQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVL 109
Query: 164 DVDFSISGEQIVSIAKDGKAFVWNS 188
V FS+ QIVS ++D +WN+
Sbjct: 110 SVAFSLDNRQIVSASRDRTIKLWNT 134
Score = 35.0 bits (79), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 53/119 (44%), Gaps = 11/119 (9%)
Query: 50 IVRKRKEKDKENAKQKGGKKEKSNEKGKNKKDKIE---------DPPILNSIDSKEKNLR 100
IV +++ + G K +E G+ +D + P I+++ S +K ++
Sbjct: 120 IVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSA--SCDKTVK 177
Query: 101 FGFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHS 159
+ +++ AG V +S +G L +GG DG + LW + K L +EA+S
Sbjct: 178 VWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANS 236
Score = 32.0 bits (71), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 49/119 (41%), Gaps = 7/119 (5%)
Query: 128 NGDLMVTGGTDGHLRLWSFPKMKPLL-----HIEAHSKEIDDVDFSISGEQIVSIAKDGK 182
N D +V+ D + +W K + HS ++DV S G+ +S + DG+
Sbjct: 27 NSDTIVSASRDKSIIVWKLTKDDKSYGVRQRRLTGHSHFVEDVVLSSDGQFALSGSWDGE 86
Query: 183 AFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGIS 241
+W+ G ++ +T D + F +V S R R L N L + K IS
Sbjct: 87 LRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIV--SASRDRTIKLWNTLGECKYTIS 143
>sp|A7MB12|UTP15_BOVIN U3 small nucleolar RNA-associated protein 15 homolog OS=Bos taurus
GN=UTP15 PE=2 SV=1
Length = 519
Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 56/120 (46%), Gaps = 4/120 (3%)
Query: 78 NKKDKIEDPPILNSIDSKEKNLRFGFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGT 137
+K D PP ++ + + +G + + ++T F+ + ++G L+V G
Sbjct: 42 SKVDFSPQPPYNYAVTASSRIHIYGRYSQEPIKT-FSRFKDTAYCATFRQDGRLLVAGSE 100
Query: 138 DGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAKDGKAFVWNSKNGSLSKEL 197
DG ++L+ PL E H+K + VDF+ +VS A D +W+ N SKE+
Sbjct: 101 DGGVQLFDISGRAPLRQFEGHTKAVHSVDFTADKYHVVSGADDYTVKLWDIPN---SKEI 157
>sp|P69104|GBLP_TRYBR Guanine nucleotide-binding protein subunit beta-like protein
OS=Trypanosoma brucei rhodesiense PE=2 SV=1
Length = 318
Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 3/112 (2%)
Query: 122 VVRLSRNGD--LMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAK 179
VR S + D ++V+GG D +++W + + ++ H+ + V S G S K
Sbjct: 157 CVRFSPSLDAPVIVSGGWDNLVKVWDLATGRLVTDLKGHTNYVTSVTVSPDGSLCASSDK 216
Query: 180 DGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLAN 231
DG A +W+ G E+ P N + F RY + + K R+F L N
Sbjct: 217 DGVARLWDLTKGEALSEMAAGAPIN-QICFSPNRYWMCAATEKGIRIFDLEN 267
Score = 44.7 bits (104), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 64/155 (41%), Gaps = 16/155 (10%)
Query: 123 VRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAKDGK 182
V LS NG+ V+ D LRLW+ + H+K++ V FS QIVS +D
Sbjct: 73 VALSNNGNFAVSASWDHSLRLWNLQNGQCQYKFLGHTKDVLSVAFSPDNRQIVSGGRDNA 132
Query: 183 AFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISY 242
VWN K + + D + V SP +L P+ + +
Sbjct: 133 LRVWNVKGECMHTLSRGAHTDWVS---------CVRFSP------SLDAPVIVSGGWDNL 177
Query: 243 VQQWDVDSGRLRL-AREMKESLSALAVRDDGRFVA 276
V+ WD+ +GRL + ++++ V DG A
Sbjct: 178 VKVWDLATGRLVTDLKGHTNYVTSVTVSPDGSLCA 212
Score = 31.2 bits (69), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 3/94 (3%)
Query: 117 ESLQRVVRLSRNGDLMVTG-GTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIV 175
E+ +VV SR+ L+ G D H S+ P +E HS + DV S +G V
Sbjct: 26 ETATKVVSTSRDKTLLSWGPNPDRHSSECSY--GLPDRRLEGHSAFVSDVALSNNGNFAV 83
Query: 176 SIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLF 209
S + D +WN +NG + +T D + F
Sbjct: 84 SASWDHSLRLWNLQNGQCQYKFLGHTKDVLSVAF 117
>sp|P69103|GBLP_TRYBB Guanine nucleotide-binding protein subunit beta-like protein
OS=Trypanosoma brucei brucei PE=2 SV=1
Length = 318
Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 3/112 (2%)
Query: 122 VVRLSRNGD--LMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAK 179
VR S + D ++V+GG D +++W + + ++ H+ + V S G S K
Sbjct: 157 CVRFSPSLDAPVIVSGGWDNLVKVWDLATGRLVTDLKGHTNYVTSVTVSPDGSLCASSDK 216
Query: 180 DGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLAN 231
DG A +W+ G E+ P N + F RY + + K R+F L N
Sbjct: 217 DGVARLWDLTKGEALSEMAAGAPIN-QICFSPNRYWMCAATEKGIRIFDLEN 267
Score = 44.7 bits (104), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 64/155 (41%), Gaps = 16/155 (10%)
Query: 123 VRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAKDGK 182
V LS NG+ V+ D LRLW+ + H+K++ V FS QIVS +D
Sbjct: 73 VALSNNGNFAVSASWDHSLRLWNLQNGQCQYKFLGHTKDVLSVAFSPDNRQIVSGGRDNA 132
Query: 183 AFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISY 242
VWN K + + D + V SP +L P+ + +
Sbjct: 133 LRVWNVKGECMHTLSRGAHTDWVS---------CVRFSP------SLDAPVIVSGGWDNL 177
Query: 243 VQQWDVDSGRLRL-AREMKESLSALAVRDDGRFVA 276
V+ WD+ +GRL + ++++ V DG A
Sbjct: 178 VKVWDLATGRLVTDLKGHTNYVTSVTVSPDGSLCA 212
Score = 31.2 bits (69), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 3/94 (3%)
Query: 117 ESLQRVVRLSRNGDLMVTG-GTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIV 175
E+ +VV SR+ L+ G D H S+ P +E HS + DV S +G V
Sbjct: 26 ETATKVVSTSRDKTLLSWGPNPDRHSSECSY--GLPDRRLEGHSAFVSDVALSNNGNFAV 83
Query: 176 SIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLF 209
S + D +WN +NG + +T D + F
Sbjct: 84 SASWDHSLRLWNLQNGQCQYKFLGHTKDVLSVAF 117
>sp|Q15542|TAF5_HUMAN Transcription initiation factor TFIID subunit 5 OS=Homo sapiens
GN=TAF5 PE=1 SV=3
Length = 800
Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 43/100 (43%)
Query: 112 VFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISG 171
+FAG + R N + + TG D +RLW + H I + FS +G
Sbjct: 622 IFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNG 681
Query: 172 EQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKR 211
+ + A DG+ +W+ +G + ELK +T F R
Sbjct: 682 RFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSR 721
Score = 39.7 bits (91), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 36/77 (46%)
Query: 112 VFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISG 171
+F G + + S NG + TG TDG + LW + ++ H+ + + FS G
Sbjct: 664 IFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDG 723
Query: 172 EQIVSIAKDGKAFVWNS 188
E + S + D +W++
Sbjct: 724 EILASGSMDNTVRLWDA 740
Score = 37.7 bits (86), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 64/155 (41%), Gaps = 19/155 (12%)
Query: 125 LSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAKDGKAF 184
S + + +++ DG +RLWS L+ + H+ + D FS G VS D A
Sbjct: 551 FSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVAR 610
Query: 185 VWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQ 244
+W + + Y R G + D +R +N +A + V+
Sbjct: 611 LWATDH----------------YQPLRIFAGHLADV-NCTRFHPNSNYVATGSADRT-VR 652
Query: 245 QWDVDSGR-LRLAREMKESLSALAVRDDGRFVAVG 278
WDV +G +R+ K + +L +GRF+A G
Sbjct: 653 LWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATG 687
Score = 32.0 bits (71), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 30/69 (43%)
Query: 123 VRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAKDGK 182
+ S G V+GG D RLW+ +PL H +++ F + + + + D
Sbjct: 591 TQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRT 650
Query: 183 AFVWNSKNG 191
+W+ NG
Sbjct: 651 VRLWDVLNG 659
>sp|Q8TED0|UTP15_HUMAN U3 small nucleolar RNA-associated protein 15 homolog OS=Homo
sapiens GN=UTP15 PE=1 SV=3
Length = 518
Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 56/120 (46%), Gaps = 4/120 (3%)
Query: 78 NKKDKIEDPPILNSIDSKEKNLRFGFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGT 137
+K D PP ++ + + +G + + ++T F+ + ++G L+V G
Sbjct: 42 SKVDFSPQPPYNYAVTASSRIHIYGRYSQEPIKT-FSRFKDTAYCATFRQDGRLLVAGSE 100
Query: 138 DGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAKDGKAFVWNSKNGSLSKEL 197
DG ++L+ PL E H+K + VDF+ +VS A D +W+ N SKE+
Sbjct: 101 DGGVQLFDISGRAPLRQFEGHTKAVHTVDFTADKYHVVSGADDYTVKLWDIPN---SKEI 157
>sp|Q5FWQ6|WDR69_XENLA Outer row dynein assembly protein 16 homolog OS=Xenopus laevis
GN=wdr69 PE=2 SV=1
Length = 415
Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 40/87 (45%)
Query: 123 VRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAKDGK 182
V G L+ T DG R++S K L +E H EI + F+ G +IV+ + D
Sbjct: 309 VTFDSTGQLVATASADGTARVYSASSRKCLAKLEGHEGEISKICFNAQGNRIVTASSDKT 368
Query: 183 AFVWNSKNGSLSKELKWNTPDNIKYLF 209
+ +W+ G + LK +T + F
Sbjct: 369 SRLWDPHTGECLQVLKGHTDEIFSCAF 395
Score = 37.7 bits (86), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Query: 122 VVRLSRN--GDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAK 179
++ LS N GD ++TG D + +W P + + + H EI F+ I + +
Sbjct: 222 IISLSFNTTGDRLITGSFDHTVSVWEIPSGRRIHTLIGHRGEISSAQFNWDCSLIATASM 281
Query: 180 DGKAFVWNSKNGSLSKEL 197
D +W+S NG L
Sbjct: 282 DKSCKLWDSLNGKCVATL 299
Score = 36.2 bits (82), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 31/61 (50%)
Query: 131 LMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAKDGKAFVWNSKN 190
L+ TG D +LW + L + H+ EI + F+ +G+++++ + D VW +
Sbjct: 191 LIATGSMDTTAKLWDIQSGEEALTLSGHAAEIISLSFNTTGDRLITGSFDHTVSVWEIPS 250
Query: 191 G 191
G
Sbjct: 251 G 251
Score = 33.9 bits (76), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 30/60 (50%)
Query: 131 LMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAKDGKAFVWNSKN 190
L+ T D +LW K + + H E+ DV F +G+ + + + DG A V+++ +
Sbjct: 275 LIATASMDKSCKLWDSLNGKCVATLTGHDDEVLDVTFDSTGQLVATASADGTARVYSASS 334
Score = 33.1 bits (74), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 31/64 (48%)
Query: 123 VRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAKDGK 182
+ + G+ +VT +D RLW + L ++ H+ EI F+ G I++ +KD
Sbjct: 351 ICFNAQGNRIVTASSDKTSRLWDPHTGECLQVLKGHTDEIFSCAFNYEGNTIITGSKDNT 410
Query: 183 AFVW 186
+W
Sbjct: 411 CRIW 414
>sp|O18640|GBLP_DROME Guanine nucleotide-binding protein subunit beta-like protein
OS=Drosophila melanogaster GN=Rack1 PE=2 SV=2
Length = 318
Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 5/95 (5%)
Query: 94 SKEKNLRFGFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLL 153
+++++ +G+ Q G V LS +G+ ++G D LRLW K
Sbjct: 46 TRDEDTNYGYP-----QKRLYGHSHFISDVVLSSDGNYALSGSWDQTLRLWDLAAGKTTR 100
Query: 154 HIEAHSKEIDDVDFSISGEQIVSIAKDGKAFVWNS 188
E H+K++ V FS QIVS ++D +WN+
Sbjct: 101 RFEGHTKDVLSVAFSADNRQIVSGSRDKTIKLWNT 135
Score = 32.3 bits (72), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
Query: 115 GSESLQRVVRLSRN--GDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGE 172
G VR S N ++V+ G D +++W+ K + H+ ++ V S G
Sbjct: 147 GHTDWVSCVRFSPNHSNPIIVSCGWDRTVKVWNLANCKLKNNHHGHNGYLNTVTVSPDGS 206
Query: 173 QIVSIAKDGKAFVWNSKNG 191
S KD KA +W+ +G
Sbjct: 207 LCTSGGKDSKALLWDLNDG 225
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.132 0.376
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 112,602,023
Number of Sequences: 539616
Number of extensions: 4847871
Number of successful extensions: 35453
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 696
Number of HSP's successfully gapped in prelim test: 579
Number of HSP's that attempted gapping in prelim test: 28630
Number of HSP's gapped (non-prelim): 5712
length of query: 297
length of database: 191,569,459
effective HSP length: 117
effective length of query: 180
effective length of database: 128,434,387
effective search space: 23118189660
effective search space used: 23118189660
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)