Query psy3337
Match_columns 297
No_of_seqs 442 out of 2819
Neff 10.6
Searched_HMMs 29240
Date Fri Aug 16 22:22:58 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3337.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/3337hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ynn_A Coatomer subunit beta'; 100.0 1.8E-36 6.3E-41 253.8 27.4 241 2-296 17-263 (304)
2 4gqb_B Methylosome protein 50; 100.0 3.6E-36 1.2E-40 256.2 25.8 190 90-296 96-293 (344)
3 3ow8_A WD repeat-containing pr 100.0 1.1E-35 3.6E-40 251.1 28.2 235 2-291 84-320 (321)
4 1got_B GT-beta; complex (GTP-b 100.0 6.9E-36 2.4E-40 254.1 25.4 238 2-289 101-340 (340)
5 3ow8_A WD repeat-containing pr 100.0 1.8E-35 6.1E-40 249.7 26.7 187 90-296 95-283 (321)
6 1vyh_C Platelet-activating fac 100.0 8.3E-36 2.9E-40 260.0 23.7 239 2-296 112-373 (410)
7 2pbi_B Guanine nucleotide-bind 100.0 1.3E-34 4.5E-39 247.6 27.0 239 2-289 110-354 (354)
8 3iz6_a 40S ribosomal protein R 100.0 2.7E-34 9.3E-39 248.0 28.4 256 2-296 112-379 (380)
9 1vyh_C Platelet-activating fac 100.0 1.2E-34 4.2E-39 252.6 25.4 235 2-291 154-410 (410)
10 1got_B GT-beta; complex (GTP-b 100.0 1E-33 3.4E-38 240.8 27.3 239 2-296 59-305 (340)
11 4gqb_B Methylosome protein 50; 100.0 7.4E-34 2.5E-38 241.9 25.8 184 90-294 142-333 (344)
12 2pbi_B Guanine nucleotide-bind 100.0 3.6E-33 1.2E-37 238.7 27.2 241 1-296 67-319 (354)
13 4g56_B MGC81050 protein; prote 100.0 3.2E-34 1.1E-38 245.5 20.4 188 92-296 110-305 (357)
14 4ery_A WD repeat-containing pr 100.0 8E-33 2.7E-37 232.2 28.5 243 2-291 27-311 (312)
15 3frx_A Guanine nucleotide-bind 100.0 2.6E-32 8.9E-37 230.1 27.0 235 2-293 69-318 (319)
16 4g56_B MGC81050 protein; prote 100.0 1.4E-32 4.7E-37 235.4 24.8 184 90-293 154-344 (357)
17 3vl1_A 26S proteasome regulato 100.0 1.2E-32 4.1E-37 240.0 24.9 247 3-295 61-325 (420)
18 3frx_A Guanine nucleotide-bind 100.0 8.5E-32 2.9E-36 226.9 28.8 184 90-295 80-270 (319)
19 1erj_A Transcriptional repress 100.0 6E-32 2.1E-36 234.3 27.2 193 90-296 138-345 (393)
20 2pm7_B Protein transport prote 100.0 7.7E-32 2.6E-36 224.9 26.1 239 2-291 13-284 (297)
21 1nr0_A Actin interacting prote 100.0 3.1E-32 1.1E-36 249.0 25.2 240 2-295 63-358 (611)
22 1erj_A Transcriptional repress 100.0 8E-32 2.7E-36 233.5 26.0 236 2-294 127-391 (393)
23 3fm0_A Protein CIAO1; WDR39,SG 100.0 2.2E-31 7.7E-36 226.8 27.1 238 3-293 21-284 (345)
24 3fm0_A Protein CIAO1; WDR39,SG 100.0 2.2E-31 7.4E-36 226.9 25.5 251 2-296 65-339 (345)
25 3iz6_a 40S ribosomal protein R 100.0 3.6E-32 1.2E-36 234.7 20.9 239 2-295 70-332 (380)
26 2xzm_R RACK1; ribosome, transl 100.0 8.6E-31 2.9E-35 222.9 27.7 183 90-295 91-288 (343)
27 2ymu_A WD-40 repeat protein; u 100.0 3.7E-31 1.3E-35 239.7 26.7 229 2-289 348-577 (577)
28 4aow_A Guanine nucleotide-bind 100.0 7.6E-31 2.6E-35 221.9 26.6 238 2-295 90-340 (340)
29 2hes_X YDR267CP; beta-propelle 100.0 9.6E-31 3.3E-35 221.5 25.6 183 90-293 73-281 (330)
30 3bg1_A Protein SEC13 homolog; 100.0 1.1E-31 3.7E-36 226.0 19.3 239 2-291 17-292 (316)
31 1gxr_A ESG1, transducin-like e 100.0 3.8E-30 1.3E-34 217.1 28.8 243 1-296 54-300 (337)
32 2ynn_A Coatomer subunit beta'; 100.0 1.4E-30 4.8E-35 218.0 25.8 234 2-292 59-302 (304)
33 4aez_A CDC20, WD repeat-contai 100.0 1.1E-30 3.7E-35 226.9 25.4 239 2-296 138-384 (401)
34 4gga_A P55CDC, cell division c 100.0 9.2E-31 3.1E-35 228.7 24.6 238 2-295 151-398 (420)
35 2ymu_A WD-40 repeat protein; u 100.0 3E-30 1E-34 233.7 27.2 233 3-295 308-541 (577)
36 4e54_B DNA damage-binding prot 100.0 2.6E-31 8.9E-36 233.3 19.0 256 1-297 167-435 (435)
37 2hes_X YDR267CP; beta-propelle 100.0 3.1E-30 1.1E-34 218.4 24.7 241 2-292 62-328 (330)
38 2xzm_R RACK1; ribosome, transl 100.0 2.5E-30 8.4E-35 220.1 22.8 234 2-294 80-342 (343)
39 4ery_A WD repeat-containing pr 100.0 1.7E-29 5.8E-34 211.9 26.9 187 90-296 38-227 (312)
40 1nr0_A Actin interacting prote 100.0 3.2E-30 1.1E-34 235.6 24.4 185 90-296 74-274 (611)
41 3dw8_B Serine/threonine-protei 100.0 1E-30 3.5E-35 229.5 20.2 172 114-296 174-377 (447)
42 3dm0_A Maltose-binding peripla 100.0 6.5E-30 2.2E-34 236.9 25.5 186 90-296 445-636 (694)
43 3f3f_A Nucleoporin SEH1; struc 100.0 6.8E-30 2.3E-34 215.9 23.5 247 1-296 14-341 (351)
44 3jrp_A Fusion protein of prote 100.0 1.6E-29 5.4E-34 216.7 26.0 237 2-292 15-287 (379)
45 4h5i_A Guanine nucleotide-exch 100.0 2.1E-30 7.1E-35 222.5 20.3 180 91-292 151-343 (365)
46 3dm0_A Maltose-binding peripla 100.0 8.1E-30 2.8E-34 236.3 25.6 235 2-292 434-693 (694)
47 1sq9_A Antiviral protein SKI8; 100.0 5.3E-30 1.8E-34 221.5 22.8 195 90-294 141-397 (397)
48 1gxr_A ESG1, transducin-like e 100.0 4.8E-29 1.7E-33 210.3 27.8 235 2-291 101-336 (337)
49 1r5m_A SIR4-interacting protei 100.0 7.4E-30 2.5E-34 221.9 23.4 248 2-291 153-424 (425)
50 3dwl_C Actin-related protein 2 100.0 1.3E-30 4.4E-35 224.1 17.8 236 1-291 14-280 (377)
51 3k26_A Polycomb protein EED; W 100.0 9.7E-30 3.3E-34 217.0 22.8 193 90-292 88-366 (366)
52 2j04_B YDR362CP, TAU91; beta p 100.0 4.1E-31 1.4E-35 236.2 14.6 185 89-292 227-428 (524)
53 3ei3_B DNA damage-binding prot 100.0 9.1E-30 3.1E-34 219.4 22.5 248 2-292 122-382 (383)
54 1k8k_C P40, ARP2/3 complex 41 100.0 4.4E-29 1.5E-33 213.7 26.4 239 1-292 11-274 (372)
55 4ggc_A P55CDC, cell division c 100.0 2.4E-29 8.1E-34 210.8 24.2 238 2-295 71-318 (318)
56 2w18_A PALB2, fancn, partner a 100.0 1.2E-29 4.2E-34 210.7 22.0 182 93-291 153-356 (356)
57 1r5m_A SIR4-interacting protei 100.0 9.8E-29 3.3E-33 214.8 28.0 184 90-294 123-363 (425)
58 1sq9_A Antiviral protein SKI8; 100.0 1.2E-29 4.2E-34 219.3 22.1 189 90-296 84-326 (397)
59 3zwl_B Eukaryotic translation 100.0 7.5E-29 2.6E-33 211.6 26.3 236 2-294 78-348 (369)
60 3mkq_A Coatomer beta'-subunit; 100.0 4.1E-29 1.4E-33 235.0 25.4 241 2-296 17-263 (814)
61 4aez_A CDC20, WD repeat-contai 100.0 1.1E-28 3.6E-33 214.3 25.6 187 90-295 149-339 (401)
62 2pm9_A Protein WEB1, protein t 100.0 1.6E-29 5.5E-34 219.7 20.4 242 2-295 71-340 (416)
63 3vl1_A 26S proteasome regulato 100.0 2.5E-29 8.7E-34 218.9 21.7 236 3-293 102-366 (420)
64 1k8k_C P40, ARP2/3 complex 41 100.0 6.2E-29 2.1E-33 212.7 23.7 241 2-295 56-364 (372)
65 3odt_A Protein DOA1; ubiquitin 100.0 2.4E-28 8.1E-33 204.1 26.6 234 2-296 63-300 (313)
66 3gre_A Serine/threonine-protei 100.0 1.5E-29 5.2E-34 221.8 20.1 259 2-289 115-437 (437)
67 4a11_B DNA excision repair pro 100.0 5.8E-29 2E-33 215.2 23.2 247 2-296 103-369 (408)
68 2aq5_A Coronin-1A; WD40 repeat 100.0 1.6E-28 5.4E-33 213.2 25.9 189 90-294 97-301 (402)
69 2pm9_A Protein WEB1, protein t 100.0 2.4E-29 8.2E-34 218.6 18.6 193 90-296 82-298 (416)
70 3gre_A Serine/threonine-protei 100.0 4.3E-29 1.5E-33 218.9 20.3 243 2-296 67-363 (437)
71 3lrv_A PRE-mRNA-splicing facto 100.0 2.8E-28 9.6E-33 207.3 23.5 185 90-293 88-293 (343)
72 3i2n_A WD repeat-containing pr 100.0 6E-29 2E-33 211.5 18.8 191 90-296 132-357 (357)
73 4h5i_A Guanine nucleotide-exch 100.0 1.3E-27 4.3E-32 205.2 26.9 191 91-296 98-304 (365)
74 2j04_B YDR362CP, TAU91; beta p 100.0 2.2E-29 7.5E-34 225.1 16.4 183 90-292 280-517 (524)
75 2pm7_B Protein transport prote 100.0 5.8E-28 2E-32 201.4 23.9 184 90-293 24-239 (297)
76 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1.5E-27 5E-32 210.3 26.5 184 87-290 115-337 (450)
77 4e54_B DNA damage-binding prot 100.0 8.2E-29 2.8E-33 217.3 18.3 161 115-295 162-330 (435)
78 3zwl_B Eukaryotic translation 100.0 1.5E-27 5E-32 203.5 25.4 239 2-296 36-308 (369)
79 3i2n_A WD repeat-containing pr 100.0 2.2E-28 7.4E-33 208.1 19.4 183 90-293 83-292 (357)
80 3v7d_B Cell division control p 100.0 1.3E-27 4.3E-32 211.1 24.9 182 90-295 176-384 (464)
81 2xyi_A Probable histone-bindin 100.0 1.7E-27 5.7E-32 208.8 25.4 246 1-293 131-411 (430)
82 3ei3_B DNA damage-binding prot 100.0 1.2E-27 4E-32 206.2 23.1 161 115-296 116-286 (383)
83 1yfq_A Cell cycle arrest prote 100.0 2E-28 6.9E-33 207.3 17.9 239 2-296 15-286 (342)
84 3jro_A Fusion protein of prote 100.0 4.1E-28 1.4E-32 226.6 21.0 239 2-293 13-286 (753)
85 3dwl_C Actin-related protein 2 100.0 1.6E-28 5.6E-33 210.9 16.9 185 90-295 26-239 (377)
86 4aow_A Guanine nucleotide-bind 100.0 1.2E-26 3.9E-31 196.2 27.8 243 2-295 42-289 (340)
87 3v7d_B Cell division control p 100.0 3.1E-27 1.1E-31 208.6 25.1 182 90-296 220-425 (464)
88 1pgu_A Actin interacting prote 100.0 2.9E-27 1E-31 215.3 25.6 187 90-296 81-287 (615)
89 3odt_A Protein DOA1; ubiquitin 100.0 4.4E-27 1.5E-31 196.4 23.6 231 2-296 22-259 (313)
90 4gq1_A NUP37; propeller, trans 100.0 1.4E-27 4.7E-32 206.9 21.0 194 90-294 159-391 (393)
91 3sfz_A APAF-1, apoptotic pepti 100.0 2.9E-27 9.8E-32 231.9 25.8 245 2-292 619-913 (1249)
92 3bg1_A Protein SEC13 homolog; 100.0 1.1E-27 3.9E-32 201.4 19.7 183 90-292 28-247 (316)
93 2aq5_A Coronin-1A; WD40 repeat 100.0 3.5E-27 1.2E-31 204.7 22.8 185 91-295 51-257 (402)
94 3sfz_A APAF-1, apoptotic pepti 100.0 1.7E-27 6E-32 233.5 23.3 252 2-296 661-1038(1249)
95 3vu4_A KMHSV2; beta-propeller 100.0 8.9E-27 3.1E-31 199.1 24.6 236 1-294 22-338 (355)
96 2oaj_A Protein SNI1; WD40 repe 100.0 4.2E-27 1.4E-31 223.2 23.8 164 115-296 56-246 (902)
97 3mmy_A MRNA export factor; mRN 100.0 7.8E-27 2.7E-31 199.0 23.3 179 110-296 80-308 (368)
98 3dw8_B Serine/threonine-protei 100.0 1.5E-26 5.1E-31 202.9 25.1 188 92-291 194-445 (447)
99 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1.7E-26 5.7E-31 203.1 24.4 179 90-296 212-395 (445)
100 1p22_A F-BOX/WD-repeat protein 100.0 1.8E-26 6E-31 202.4 23.4 177 90-294 186-367 (435)
101 1pgu_A Actin interacting prote 100.0 6.6E-26 2.3E-30 206.3 27.9 176 97-296 142-332 (615)
102 2j04_A TAU60, YPL007P, hypothe 100.0 5E-27 1.7E-31 206.9 19.1 158 115-295 83-257 (588)
103 1p22_A F-BOX/WD-repeat protein 99.9 9.5E-27 3.2E-31 204.2 20.2 178 90-295 226-417 (435)
104 4gq1_A NUP37; propeller, trans 99.9 3.3E-27 1.1E-31 204.5 16.3 198 90-296 104-352 (393)
105 2ovr_B FBW7, F-BOX/WD repeat p 99.9 5.9E-26 2E-30 199.6 23.9 179 90-296 172-352 (445)
106 4gga_A P55CDC, cell division c 99.9 6.4E-26 2.2E-30 198.0 23.9 188 90-296 162-357 (420)
107 3jrp_A Fusion protein of prote 99.9 6.8E-26 2.3E-30 194.0 23.1 184 90-293 26-241 (379)
108 1l0q_A Surface layer protein; 99.9 7.9E-25 2.7E-29 188.8 26.2 240 2-296 35-279 (391)
109 2oaj_A Protein SNI1; WD40 repe 99.9 3.1E-26 1.1E-30 217.3 18.8 254 4-296 441-787 (902)
110 4a11_B DNA excision repair pro 99.9 8.4E-25 2.9E-29 189.1 25.5 161 115-295 97-279 (408)
111 3mkq_A Coatomer beta'-subunit; 99.9 3.5E-25 1.2E-29 208.3 24.3 235 2-293 59-303 (814)
112 4ggc_A P55CDC, cell division c 99.9 1.2E-24 4E-29 182.2 24.3 192 90-296 82-277 (318)
113 3lrv_A PRE-mRNA-splicing facto 99.9 1.6E-25 5.4E-30 190.3 19.1 181 90-295 51-247 (343)
114 3f3f_A Nucleoporin SEH1; struc 99.9 1.4E-24 4.8E-29 183.2 24.4 195 90-294 26-251 (351)
115 2vdu_B TRNA (guanine-N(7)-)-me 99.9 7.1E-25 2.4E-29 193.1 23.3 161 116-296 101-275 (450)
116 1l0q_A Surface layer protein; 99.9 3.8E-24 1.3E-28 184.5 26.1 185 90-296 47-237 (391)
117 3k26_A Polycomb protein EED; W 99.9 3E-25 1E-29 189.1 18.7 182 92-294 39-262 (366)
118 2xyi_A Probable histone-bindin 99.9 1.7E-24 5.7E-29 189.7 22.5 185 88-292 142-353 (430)
119 3jro_A Fusion protein of prote 99.9 1.3E-24 4.6E-29 202.9 22.7 185 90-294 24-240 (753)
120 1yfq_A Cell cycle arrest prote 99.9 9.5E-25 3.2E-29 184.7 19.4 232 2-284 60-315 (342)
121 3bws_A Protein LP49; two-domai 99.9 1.6E-23 5.4E-28 183.1 27.5 187 90-296 184-394 (433)
122 3bws_A Protein LP49; two-domai 99.9 7.8E-24 2.7E-28 185.0 25.3 243 2-292 173-432 (433)
123 2j04_A TAU60, YPL007P, hypothe 99.9 4.5E-24 1.6E-28 188.1 22.3 148 119-291 131-296 (588)
124 3mmy_A MRNA export factor; mRN 99.9 5.3E-24 1.8E-28 181.4 18.8 189 91-290 102-344 (368)
125 2w18_A PALB2, fancn, partner a 99.9 1.3E-22 4.4E-27 168.7 22.6 190 96-296 62-318 (356)
126 3vu4_A KMHSV2; beta-propeller 99.9 1.7E-21 5.8E-26 166.3 23.1 179 92-294 36-273 (355)
127 2oit_A Nucleoporin 214KDA; NH2 99.9 7.7E-22 2.6E-26 172.8 20.9 160 115-293 90-279 (434)
128 2hqs_A Protein TOLB; TOLB, PAL 99.9 2.1E-21 7.3E-26 169.2 23.4 178 97-295 159-347 (415)
129 1pby_B Quinohemoprotein amine 99.9 2.7E-20 9.3E-25 156.7 22.1 192 91-296 50-314 (337)
130 3u4y_A Uncharacterized protein 99.9 3E-20 1E-24 156.5 21.2 191 90-295 55-255 (331)
131 2hqs_A Protein TOLB; TOLB, PAL 99.9 7.3E-20 2.5E-24 159.5 24.2 177 97-294 203-389 (415)
132 1nir_A Nitrite reductase; hemo 99.9 7.5E-20 2.6E-24 164.5 23.7 198 89-296 151-359 (543)
133 3vgz_A Uncharacterized protein 99.9 2.3E-19 7.9E-24 152.1 25.4 193 90-296 104-307 (353)
134 1jmx_B Amine dehydrogenase; ox 99.9 5.4E-20 1.9E-24 155.7 20.3 244 5-296 6-329 (349)
135 1ri6_A Putative isomerase YBHE 99.8 6.8E-19 2.3E-23 148.5 24.2 188 91-291 100-307 (343)
136 1nir_A Nitrite reductase; hemo 99.8 2.1E-19 7.1E-24 161.6 21.4 245 3-296 183-462 (543)
137 3u4y_A Uncharacterized protein 99.8 3.8E-18 1.3E-22 143.6 23.0 186 90-295 13-210 (331)
138 3vgz_A Uncharacterized protein 99.8 1.1E-17 3.6E-22 141.9 25.8 167 94-280 161-333 (353)
139 3hfq_A Uncharacterized protein 99.8 4.7E-17 1.6E-21 138.0 26.1 194 91-295 102-322 (347)
140 2ecf_A Dipeptidyl peptidase IV 99.8 1.6E-18 5.3E-23 161.6 18.3 180 97-291 129-366 (741)
141 3scy_A Hypothetical bacterial 99.8 3.9E-17 1.3E-21 139.3 25.1 192 90-295 113-342 (361)
142 2oit_A Nucleoporin 214KDA; NH2 99.8 2.8E-19 9.7E-24 156.5 10.9 155 117-291 36-222 (434)
143 2ojh_A Uncharacterized protein 99.8 2.1E-17 7.3E-22 136.0 21.3 177 92-291 17-203 (297)
144 1xfd_A DIP, dipeptidyl aminope 99.8 6.3E-19 2.2E-23 163.7 12.6 184 95-289 89-341 (723)
145 2ojh_A Uncharacterized protein 99.8 1.7E-17 6E-22 136.5 19.6 166 98-280 111-291 (297)
146 1xfd_A DIP, dipeptidyl aminope 99.8 3.4E-18 1.2E-22 158.9 16.6 196 94-295 34-292 (723)
147 3o4h_A Acylamino-acid-releasin 99.8 1.4E-17 4.7E-22 151.2 19.0 151 120-296 112-278 (582)
148 1ri6_A Putative isomerase YBHE 99.8 3.3E-17 1.1E-21 138.1 19.9 183 90-292 8-209 (343)
149 2z3z_A Dipeptidyl aminopeptida 99.8 4.9E-17 1.7E-21 150.7 21.0 186 95-294 139-393 (706)
150 2z3z_A Dipeptidyl aminopeptida 99.8 1.1E-16 3.8E-21 148.3 21.7 184 95-294 233-437 (706)
151 1pby_B Quinohemoprotein amine 99.8 1.7E-16 5.9E-21 133.3 21.0 192 91-296 5-273 (337)
152 1jof_A Carboxy-CIS,CIS-muconat 99.7 1.8E-15 6.3E-20 129.3 27.1 193 95-293 117-342 (365)
153 1jmx_B Amine dehydrogenase; ox 99.7 1.6E-16 5.6E-21 134.2 20.2 185 90-296 14-288 (349)
154 2ecf_A Dipeptidyl peptidase IV 99.7 3.9E-17 1.3E-21 152.2 17.4 146 117-283 36-230 (741)
155 1k32_A Tricorn protease; prote 99.7 5.5E-17 1.9E-21 156.7 17.4 175 95-294 263-463 (1045)
156 1k32_A Tricorn protease; prote 99.7 1.8E-16 6.1E-21 153.1 20.5 181 96-292 316-502 (1045)
157 3hfq_A Uncharacterized protein 99.7 2.5E-15 8.5E-20 127.3 22.9 181 95-291 61-270 (347)
158 1z68_A Fibroblast activation p 99.7 3.3E-17 1.1E-21 152.2 12.2 193 95-295 34-294 (719)
159 3o4h_A Acylamino-acid-releasin 99.7 3E-16 1E-20 142.4 16.2 178 92-292 128-315 (582)
160 1q7f_A NHL, brain tumor CG1071 99.7 2E-14 7E-19 118.4 25.2 179 96-296 99-284 (286)
161 2oiz_A Aromatic amine dehydrog 99.7 5.4E-15 1.9E-19 126.3 20.3 197 94-296 28-340 (361)
162 1z68_A Fibroblast activation p 99.7 1.2E-15 3.9E-20 141.8 14.2 139 122-282 20-189 (719)
163 4a5s_A Dipeptidyl peptidase 4 99.7 2E-15 6.9E-20 140.8 15.8 186 97-295 92-356 (740)
164 3pe7_A Oligogalacturonate lyas 99.6 2.3E-14 7.8E-19 123.0 21.2 187 98-294 12-227 (388)
165 4a5s_A Dipeptidyl peptidase 4 99.6 3.7E-15 1.3E-19 139.0 17.4 193 96-294 35-296 (740)
166 3no2_A Uncharacterized protein 99.6 3.5E-14 1.2E-18 116.7 19.6 188 90-296 8-199 (276)
167 3scy_A Hypothetical bacterial 99.6 8.3E-14 2.8E-18 118.6 22.7 192 93-294 23-244 (361)
168 3fvz_A Peptidyl-glycine alpha- 99.6 4.5E-13 1.5E-17 112.8 25.1 188 92-292 107-322 (329)
169 1jof_A Carboxy-CIS,CIS-muconat 99.6 1.4E-13 4.8E-18 117.6 19.5 181 98-294 61-294 (365)
170 3pe7_A Oligogalacturonate lyas 99.6 1.6E-13 5.6E-18 117.7 19.6 181 98-295 61-276 (388)
171 1qks_A Cytochrome CD1 nitrite 99.6 1.2E-12 4E-17 117.8 24.1 196 91-296 171-377 (567)
172 3azo_A Aminopeptidase; POP fam 99.6 1.7E-13 5.8E-18 126.0 18.1 187 94-294 44-276 (662)
173 3fvz_A Peptidyl-glycine alpha- 99.5 9.8E-13 3.4E-17 110.7 20.4 188 95-296 67-281 (329)
174 1rwi_B Serine/threonine-protei 99.5 3.3E-12 1.1E-16 104.0 21.6 182 96-297 86-269 (270)
175 2dg1_A DRP35, lactonase; beta 99.5 5.8E-12 2E-16 105.9 23.4 184 95-292 25-213 (333)
176 2mad_H Methylamine dehydrogena 99.5 1.2E-11 4E-16 105.9 25.2 194 98-296 48-354 (373)
177 3c75_H MADH, methylamine dehyd 99.5 9.2E-13 3.1E-17 113.9 18.4 196 97-296 99-406 (426)
178 3azo_A Aminopeptidase; POP fam 99.5 1.2E-12 4E-17 120.4 19.0 176 96-294 101-327 (662)
179 3e5z_A Putative gluconolactona 99.5 9.5E-12 3.3E-16 102.9 22.7 172 109-291 20-201 (296)
180 2dg1_A DRP35, lactonase; beta 99.5 1E-11 3.4E-16 104.4 22.9 180 92-291 61-262 (333)
181 3c5m_A Oligogalacturonate lyas 99.5 1.1E-13 3.9E-18 118.8 10.9 182 96-295 59-276 (396)
182 3no2_A Uncharacterized protein 99.5 1.8E-11 6.3E-16 100.3 22.9 163 95-279 54-231 (276)
183 3c5m_A Oligogalacturonate lyas 99.5 4.2E-13 1.4E-17 115.2 12.9 189 101-294 15-227 (396)
184 3dsm_A Uncharacterized protein 99.5 2E-11 6.8E-16 102.7 22.9 186 92-295 59-256 (328)
185 1q7f_A NHL, brain tumor CG1071 99.4 3.1E-11 1.1E-15 99.2 22.0 179 92-291 46-237 (286)
186 2gop_A Trilobed protease; beta 99.4 1.3E-11 4.6E-16 104.1 19.1 163 95-289 41-250 (347)
187 2xdw_A Prolyl endopeptidase; a 99.4 6.6E-12 2.3E-16 116.5 18.4 167 115-293 122-321 (710)
188 3dsm_A Uncharacterized protein 99.4 2.4E-11 8.1E-16 102.3 20.0 189 92-296 12-216 (328)
189 2xdw_A Prolyl endopeptidase; a 99.4 1.6E-11 5.5E-16 113.9 20.7 185 93-295 147-371 (710)
190 2gop_A Trilobed protease; beta 99.4 1.5E-11 5.1E-16 103.8 18.4 171 98-294 86-293 (347)
191 3e5z_A Putative gluconolactona 99.4 6.1E-11 2.1E-15 98.0 21.7 178 93-295 86-289 (296)
192 3sjl_D Methylamine dehydrogena 99.4 2.7E-11 9.3E-16 103.0 19.7 198 96-296 58-367 (386)
193 1xip_A Nucleoporin NUP159; bet 99.4 2.2E-11 7.6E-16 103.9 18.4 133 116-278 87-231 (388)
194 2bkl_A Prolyl endopeptidase; m 99.4 9.4E-12 3.2E-16 115.2 16.2 166 115-294 118-306 (695)
195 1mda_H Methylamine dehydrogena 99.4 2.3E-11 7.8E-16 103.4 16.0 189 98-296 47-350 (368)
196 1xip_A Nucleoporin NUP159; bet 99.3 4.6E-11 1.6E-15 101.9 14.2 144 119-294 39-193 (388)
197 1rwi_B Serine/threonine-protei 99.3 4.7E-10 1.6E-14 91.1 19.7 180 92-293 41-223 (270)
198 2bkl_A Prolyl endopeptidase; m 99.3 3.5E-10 1.2E-14 104.7 20.0 179 92-291 142-348 (695)
199 1yr2_A Prolyl oligopeptidase; 99.3 4.1E-10 1.4E-14 105.0 19.5 166 115-293 160-351 (741)
200 2oiz_A Aromatic amine dehydrog 99.2 4.8E-10 1.6E-14 95.5 18.1 142 137-292 29-182 (361)
201 3hrp_A Uncharacterized protein 99.2 2.3E-09 7.8E-14 92.9 22.2 184 98-291 195-409 (409)
202 2z2n_A Virginiamycin B lyase; 99.2 1.7E-08 5.9E-13 82.8 26.1 154 116-290 97-253 (299)
203 3g4e_A Regucalcin; six bladed 99.2 3.8E-09 1.3E-13 87.4 20.7 181 92-296 30-233 (297)
204 1pjx_A Dfpase, DIISOPROPYLFLUO 99.2 3.4E-09 1.2E-13 87.9 20.6 159 118-292 117-299 (314)
205 2hz6_A Endoplasmic reticulum t 99.2 1.3E-12 4.6E-17 111.7 -0.4 177 92-296 14-196 (369)
206 1qks_A Cytochrome CD1 nitrite 99.2 4E-09 1.4E-13 94.9 21.3 148 127-293 165-330 (567)
207 3dr2_A Exported gluconolactona 99.2 7.2E-09 2.5E-13 86.0 21.3 173 108-292 36-224 (305)
208 2z2n_A Virginiamycin B lyase; 99.2 2.5E-08 8.5E-13 81.8 23.9 176 96-294 35-214 (299)
209 1yr2_A Prolyl oligopeptidase; 99.1 2.7E-09 9.2E-14 99.5 19.3 175 97-291 189-392 (741)
210 2ece_A 462AA long hypothetical 99.1 5.2E-09 1.8E-13 89.9 19.0 194 89-291 98-351 (462)
211 2qc5_A Streptogramin B lactona 99.1 6.8E-08 2.3E-12 79.2 25.4 172 96-290 82-258 (300)
212 1pjx_A Dfpase, DIISOPROPYLFLUO 99.1 1.1E-08 3.8E-13 84.8 20.5 181 93-295 42-259 (314)
213 2iwa_A Glutamine cyclotransfer 99.1 4.4E-08 1.5E-12 79.0 22.4 180 96-293 43-238 (266)
214 3hrp_A Uncharacterized protein 99.1 1.7E-08 5.7E-13 87.4 21.3 186 93-295 148-357 (409)
215 3sjl_D Methylamine dehydrogena 99.1 7.1E-09 2.4E-13 88.2 18.0 154 125-292 40-208 (386)
216 3iuj_A Prolyl endopeptidase; h 99.1 3.4E-09 1.2E-13 98.0 17.4 167 115-294 126-316 (693)
217 2iwa_A Glutamine cyclotransfer 99.1 3.1E-08 1E-12 80.0 20.7 166 107-296 10-185 (266)
218 2hz6_A Endoplasmic reticulum t 99.1 2.8E-11 9.4E-16 103.5 2.9 146 128-296 8-153 (369)
219 1yiq_A Quinohemoprotein alcoho 99.1 6.7E-09 2.3E-13 95.8 18.9 201 95-296 181-509 (689)
220 2ghs_A AGR_C_1268P; regucalcin 99.1 7.7E-08 2.6E-12 80.6 23.0 176 93-295 67-262 (326)
221 1fwx_A Nitrous oxide reductase 99.1 2.6E-08 8.7E-13 88.5 20.2 182 91-292 106-361 (595)
222 3g4e_A Regucalcin; six bladed 99.0 3.5E-07 1.2E-11 75.5 25.1 164 115-290 10-178 (297)
223 2mad_H Methylamine dehydrogena 99.0 4.3E-08 1.5E-12 83.7 19.8 153 126-295 29-198 (373)
224 1kb0_A Quinohemoprotein alcoho 99.0 2.3E-08 7.8E-13 92.1 18.9 200 96-296 189-511 (677)
225 2qc5_A Streptogramin B lactona 99.0 3.4E-07 1.2E-11 75.0 23.6 174 95-290 39-216 (300)
226 3nok_A Glutaminyl cyclase; bet 99.0 7.9E-08 2.7E-12 76.8 18.4 163 107-296 44-214 (268)
227 3dr2_A Exported gluconolactona 99.0 5.6E-08 1.9E-12 80.6 18.3 149 119-289 132-303 (305)
228 2ghs_A AGR_C_1268P; regucalcin 99.0 4.1E-07 1.4E-11 76.2 23.6 161 119-293 50-213 (326)
229 3nol_A Glutamine cyclotransfer 99.0 1.5E-07 5.2E-12 75.2 19.2 165 107-296 32-205 (262)
230 3iuj_A Prolyl endopeptidase; h 98.9 6.3E-08 2.2E-12 89.6 19.4 182 92-293 150-360 (693)
231 2ece_A 462AA long hypothetical 98.9 4.1E-07 1.4E-11 78.3 21.5 187 96-291 43-288 (462)
232 3nok_A Glutaminyl cyclase; bet 98.9 2.9E-07 9.8E-12 73.6 19.1 172 88-279 66-253 (268)
233 2qe8_A Uncharacterized protein 98.9 8.3E-08 2.8E-12 81.0 16.8 163 118-290 17-224 (343)
234 2qe8_A Uncharacterized protein 98.9 1.3E-07 4.5E-12 79.8 17.8 172 115-294 64-280 (343)
235 3nol_A Glutamine cyclotransfer 98.9 4.7E-07 1.6E-11 72.3 19.4 172 90-280 56-244 (262)
236 3c75_H MADH, methylamine dehyd 98.9 1E-07 3.5E-12 82.4 16.6 112 139-261 99-220 (426)
237 1fwx_A Nitrous oxide reductase 98.8 5.5E-08 1.9E-12 86.4 13.8 186 90-293 168-432 (595)
238 3mbr_X Glutamine cyclotransfer 98.8 1.7E-06 5.9E-11 68.5 20.3 164 108-296 11-183 (243)
239 3mbr_X Glutamine cyclotransfer 98.8 4.6E-06 1.6E-10 66.0 22.0 165 97-280 43-223 (243)
240 1kv9_A Type II quinohemoprotei 98.7 6E-07 2E-11 82.6 18.4 200 96-296 177-492 (668)
241 1npe_A Nidogen, entactin; glyc 98.7 2.1E-05 7.3E-10 63.5 24.5 183 94-296 55-242 (267)
242 3q7m_A Lipoprotein YFGL, BAMB; 98.6 7.3E-06 2.5E-10 69.7 21.1 185 93-296 59-262 (376)
243 1npe_A Nidogen, entactin; glyc 98.6 2.5E-05 8.5E-10 63.1 22.9 161 118-293 36-199 (267)
244 1kb0_A Quinohemoprotein alcoho 98.6 3.4E-06 1.2E-10 77.7 19.4 161 98-277 284-536 (677)
245 3q7m_A Lipoprotein YFGL, BAMB; 98.5 1.6E-05 5.5E-10 67.6 20.5 185 92-296 108-300 (376)
246 2ad6_A Methanol dehydrogenase 98.5 8.6E-06 3E-10 73.4 19.5 173 123-296 240-498 (571)
247 1mda_H Methylamine dehydrogena 98.5 6.7E-07 2.3E-11 76.0 11.0 126 140-292 47-194 (368)
248 1yiq_A Quinohemoprotein alcoho 98.5 4.2E-06 1.4E-10 77.2 16.7 192 93-296 76-342 (689)
249 2xe4_A Oligopeptidase B; hydro 98.5 2.2E-06 7.6E-11 79.9 14.8 158 119-292 175-354 (751)
250 1flg_A Protein (quinoprotein e 98.5 2E-05 6.9E-10 71.2 20.0 157 139-296 291-520 (582)
251 3hxj_A Pyrrolo-quinoline quino 98.5 1.1E-05 3.6E-10 67.1 16.8 171 93-294 113-285 (330)
252 1w6s_A Methanol dehydrogenase 98.5 2.3E-05 7.9E-10 70.9 19.8 200 96-296 181-507 (599)
253 3hxj_A Pyrrolo-quinoline quino 98.4 2.7E-05 9.2E-10 64.6 17.6 172 93-294 153-326 (330)
254 2fp8_A Strictosidine synthase; 98.4 3.9E-05 1.3E-09 63.8 18.4 165 120-292 21-216 (322)
255 3tc9_A Hypothetical hydrolase; 98.3 0.00012 4.1E-09 63.6 20.5 151 120-291 139-300 (430)
256 1ijq_A LDL receptor, low-densi 98.3 0.00056 1.9E-08 56.7 23.3 176 98-292 11-195 (316)
257 3qqz_A Putative uncharacterize 98.2 0.00071 2.4E-08 54.1 21.3 184 95-292 47-253 (255)
258 1kv9_A Type II quinohemoprotei 98.2 7.9E-05 2.7E-09 68.5 17.4 195 93-296 72-337 (668)
259 2p9w_A MAL S 1 allergenic prot 98.2 0.00016 5.6E-09 59.7 17.1 162 117-292 12-215 (334)
260 3v64_C Agrin; beta propeller, 98.1 0.0019 6.4E-08 54.4 23.4 177 98-292 54-234 (349)
261 3amr_A 3-phytase; beta-propell 98.1 0.0013 4.3E-08 54.9 21.6 175 96-294 49-266 (355)
262 2p4o_A Hypothetical protein; p 98.1 0.0019 6.5E-08 53.1 22.9 154 118-292 32-198 (306)
263 3p5b_L Low density lipoprotein 98.1 0.0024 8.2E-08 54.8 24.1 178 97-292 92-277 (400)
264 3v65_B Low-density lipoprotein 98.1 0.001 3.5E-08 56.8 21.5 177 98-292 97-277 (386)
265 1flg_A Protein (quinoprotein e 98.1 0.0006 2.1E-08 61.5 20.7 160 97-276 291-544 (582)
266 2xe4_A Oligopeptidase B; hydro 98.1 7.2E-05 2.5E-09 69.8 14.8 180 93-290 197-398 (751)
267 2ad6_A Methanol dehydrogenase 98.1 0.00061 2.1E-08 61.4 20.2 161 98-278 273-524 (571)
268 3v65_B Low-density lipoprotein 98.1 0.0015 5.1E-08 55.8 21.5 156 120-294 161-320 (386)
269 3v64_C Agrin; beta propeller, 98.0 0.0023 7.8E-08 53.8 22.2 156 120-294 118-277 (349)
270 2fp8_A Strictosidine synthase; 98.0 0.0015 5E-08 54.1 20.4 151 119-290 81-267 (322)
271 4hw6_A Hypothetical protein, I 98.0 0.0016 5.4E-08 56.5 20.7 153 120-291 141-303 (433)
272 3qqz_A Putative uncharacterize 98.0 0.00095 3.2E-08 53.4 17.5 165 115-291 24-203 (255)
273 1w6s_A Methanol dehydrogenase 98.0 0.00083 2.9E-08 60.7 18.9 198 96-296 72-346 (599)
274 1ijq_A LDL receptor, low-densi 98.0 0.0054 1.8E-07 50.7 23.6 158 119-295 78-241 (316)
275 3kya_A Putative phosphatase; s 97.9 0.0018 6.3E-08 56.8 19.6 153 120-290 141-339 (496)
276 3p5b_L Low density lipoprotein 97.9 0.0089 3.1E-07 51.2 24.6 159 118-295 159-323 (400)
277 3sov_A LRP-6, low-density lipo 97.9 0.0064 2.2E-07 50.4 21.9 157 120-295 81-241 (318)
278 3sov_A LRP-6, low-density lipo 97.8 0.0047 1.6E-07 51.2 20.2 179 97-292 13-197 (318)
279 4a0p_A LRP6, LRP-6, low-densit 97.8 0.0089 3.1E-07 54.4 22.7 182 95-292 13-197 (628)
280 3amr_A 3-phytase; beta-propell 97.8 0.004 1.4E-07 51.9 18.5 146 129-291 40-209 (355)
281 3m0c_C LDL receptor, low-densi 97.8 0.013 4.6E-07 54.6 24.2 173 102-292 410-589 (791)
282 4hw6_A Hypothetical protein, I 97.7 0.0036 1.2E-07 54.3 18.5 159 115-290 179-372 (433)
283 1k3i_A Galactose oxidase precu 97.6 0.0015 5.3E-08 59.8 15.6 197 95-294 263-499 (656)
284 3m0c_C LDL receptor, low-densi 97.6 0.023 7.8E-07 53.1 23.0 158 118-294 471-634 (791)
285 3s94_A LRP-6, low-density lipo 97.6 0.029 1E-06 50.9 22.6 178 96-292 17-202 (619)
286 2p4o_A Hypothetical protein; p 97.5 0.024 8.3E-07 46.4 22.2 156 102-280 101-277 (306)
287 1n7d_A LDL receptor, low-densi 97.5 0.00052 1.8E-08 63.4 11.0 155 120-296 455-618 (699)
288 1n7d_A LDL receptor, low-densi 97.5 0.0003 1E-08 64.9 9.3 175 97-292 386-571 (699)
289 4a2l_A BT_4663, two-component 97.5 0.034 1.2E-06 52.1 22.2 156 118-294 406-573 (795)
290 4a2l_A BT_4663, two-component 97.4 0.028 9.6E-07 52.6 21.6 160 117-294 262-438 (795)
291 3sre_A PON1, serum paraoxonase 97.4 0.024 8.2E-07 47.6 18.4 159 122-291 54-251 (355)
292 3tc9_A Hypothetical hydrolase; 97.4 0.037 1.3E-06 47.8 19.9 70 120-189 228-300 (430)
293 2p9w_A MAL S 1 allergenic prot 97.3 0.017 6E-07 47.6 16.2 185 92-289 30-262 (334)
294 3a9g_A Putative uncharacterize 97.3 0.043 1.5E-06 46.1 18.9 154 118-278 29-215 (354)
295 2ism_A Putative oxidoreductase 97.3 0.036 1.2E-06 46.5 18.4 153 119-279 32-221 (352)
296 3pbp_A Nucleoporin NUP82; beta 97.2 0.07 2.4E-06 45.6 18.8 146 127-288 30-208 (452)
297 3s94_A LRP-6, low-density lipo 97.1 0.053 1.8E-06 49.2 18.7 159 118-295 84-246 (619)
298 2xbg_A YCF48-like protein; pho 97.1 0.094 3.2E-06 43.4 21.7 164 105-290 150-320 (327)
299 1cru_A Protein (soluble quinop 97.0 0.15 5.1E-06 44.4 22.9 169 118-291 27-258 (454)
300 2g8s_A Glucose/sorbosone dehyd 97.0 0.053 1.8E-06 45.5 16.7 154 119-277 19-214 (353)
301 3das_A Putative oxidoreductase 97.0 0.13 4.3E-06 43.1 19.9 157 115-278 29-219 (347)
302 4a0p_A LRP6, LRP-6, low-densit 97.0 0.21 7.3E-06 45.3 22.3 155 119-294 81-239 (628)
303 1k3i_A Galactose oxidase precu 96.9 0.015 5.3E-07 53.2 13.5 120 122-252 190-325 (656)
304 3kya_A Putative phosphatase; s 96.8 0.25 8.6E-06 43.3 21.4 115 119-249 187-340 (496)
305 3v9f_A Two-component system se 96.7 0.32 1.1E-05 45.3 21.1 154 118-293 363-525 (781)
306 3pbp_A Nucleoporin NUP82; beta 96.7 0.13 4.5E-06 43.9 16.3 141 95-246 39-208 (452)
307 3v9f_A Two-component system se 96.5 0.31 1E-05 45.5 19.6 155 117-293 449-612 (781)
308 3sre_A PON1, serum paraoxonase 96.3 0.4 1.4E-05 40.2 18.8 165 95-280 81-286 (355)
309 2xzh_A Clathrin heavy chain 1; 96.2 0.4 1.4E-05 39.6 23.8 184 98-296 50-294 (365)
310 1tl2_A L10, protein (tachylect 96.1 0.12 4.2E-06 40.0 11.7 139 119-278 42-199 (236)
311 2xbg_A YCF48-like protein; pho 95.8 0.64 2.2E-05 38.3 19.4 145 117-285 121-272 (327)
312 2be1_A Serine/threonine-protei 95.8 0.072 2.4E-06 44.3 10.0 148 130-289 11-181 (339)
313 2vpj_A Kelch-like protein 12; 95.7 0.64 2.2E-05 37.5 17.4 149 128-294 112-280 (301)
314 3sbq_A Nitrous-oxide reductase 95.7 0.14 4.8E-06 45.3 11.7 106 160-280 323-454 (638)
315 2xn4_A Kelch-like protein 2; s 95.7 0.67 2.3E-05 37.4 15.6 150 128-294 108-278 (302)
316 3s25_A Hypothetical 7-bladed b 95.6 0.54 1.8E-05 38.4 14.6 148 96-278 87-240 (302)
317 3ii7_A Kelch-like protein 7; p 95.5 0.77 2.6E-05 37.1 16.1 149 127-293 54-226 (306)
318 1bpo_A Protein (clathrin); cla 95.4 1.2 3.9E-05 38.4 24.8 184 98-296 49-293 (494)
319 3das_A Putative oxidoreductase 95.4 0.39 1.3E-05 40.0 13.2 117 154-279 26-158 (347)
320 2vpj_A Kelch-like protein 12; 95.0 1.1 3.8E-05 36.0 16.8 151 127-294 61-233 (301)
321 2ism_A Putative oxidoreductase 94.8 1.5 5E-05 36.6 16.0 62 117-178 74-153 (352)
322 3s25_A Hypothetical 7-bladed b 94.8 1.4 4.7E-05 36.0 17.9 140 122-292 57-216 (302)
323 3ii7_A Kelch-like protein 7; p 94.7 1.3 4.6E-05 35.7 16.2 149 128-294 101-274 (306)
324 2xzh_A Clathrin heavy chain 1; 94.7 1.5 5.2E-05 36.2 18.1 159 118-292 152-332 (365)
325 1xi4_A Clathrin heavy chain; a 94.6 1.2 4E-05 44.3 15.4 73 122-198 70-143 (1630)
326 2be1_A Serine/threonine-protei 94.3 0.29 9.9E-06 40.7 9.5 109 172-296 11-134 (339)
327 1zgk_A Kelch-like ECH-associat 94.2 1.8 6.1E-05 35.0 14.8 150 128-294 121-289 (308)
328 1cru_A Protein (soluble quinop 93.6 3.3 0.00011 35.9 16.1 115 159-279 26-162 (454)
329 1zgk_A Kelch-like ECH-associat 93.1 2.9 0.0001 33.7 14.7 150 128-294 70-242 (308)
330 1bpo_A Protein (clathrin); cla 93.0 4 0.00014 35.2 21.2 159 118-292 151-331 (494)
331 2xn4_A Kelch-like protein 2; s 92.7 3.2 0.00011 33.3 17.3 149 128-294 61-231 (302)
332 4asc_A Kelch repeat and BTB do 92.5 3.5 0.00012 33.3 15.6 63 128-192 98-176 (315)
333 2g8s_A Glucose/sorbosone dehyd 92.0 2.4 8.2E-05 35.3 11.9 115 160-278 18-147 (353)
334 4asc_A Kelch repeat and BTB do 91.9 4.2 0.00014 32.9 17.4 180 98-293 14-222 (315)
335 2woz_A Kelch repeat and BTB do 90.7 5.7 0.0002 32.1 14.8 64 128-193 109-187 (318)
336 3sbq_A Nitrous-oxide reductase 90.4 1.5 5E-05 39.0 9.0 69 121-190 326-408 (638)
337 2uvk_A YJHT; unknown function, 89.7 7.5 0.00026 31.9 14.9 53 242-296 286-346 (357)
338 2wg3_C Hedgehog-interacting pr 88.7 11 0.00038 32.6 18.4 51 120-170 16-79 (463)
339 1tl2_A L10, protein (tachylect 88.1 7.7 0.00026 30.0 14.5 101 160-278 41-152 (236)
340 2wg3_C Hedgehog-interacting pr 87.8 9 0.00031 33.2 12.3 30 160-189 14-44 (463)
341 3a9g_A Putative uncharacterize 87.5 11 0.00038 31.2 18.6 61 118-178 73-153 (354)
342 4a9v_A PHOX; hydrolase, beta-p 86.3 3.8 0.00013 36.5 9.0 65 215-279 479-549 (592)
343 2woz_A Kelch repeat and BTB do 85.6 13 0.00043 30.0 17.8 179 99-293 26-232 (318)
344 1xi4_A Clathrin heavy chain; a 83.8 23 0.00077 35.6 13.6 157 118-291 151-330 (1630)
345 4gq2_M Nucleoporin NUP120; bet 83.6 4.7 0.00016 38.6 9.1 39 161-199 237-275 (950)
346 3zwu_A Alkaline phosphatase PH 82.9 7.2 0.00025 35.0 9.4 64 216-279 480-549 (592)
347 2uvk_A YJHT; unknown function, 82.5 19 0.00064 29.5 14.2 52 128-180 65-128 (357)
348 2zwa_A Leucine carboxyl methyl 81.7 31 0.0011 31.5 19.7 159 128-294 451-637 (695)
349 3ei3_A DNA damage-binding prot 81.4 43 0.0015 32.9 22.9 173 96-292 806-999 (1158)
350 3ei3_A DNA damage-binding prot 81.0 44 0.0015 32.8 23.0 74 119-196 515-597 (1158)
351 3ott_A Two-component system se 80.3 36 0.0012 31.3 20.9 154 118-294 63-222 (758)
352 3zwu_A Alkaline phosphatase PH 78.9 8.3 0.00028 34.6 8.4 58 120-177 478-548 (592)
353 2zwa_A Leucine carboxyl methyl 77.9 42 0.0014 30.7 15.5 152 127-294 396-579 (695)
354 4a9v_A PHOX; hydrolase, beta-p 72.0 24 0.00081 31.5 9.3 60 119-178 477-549 (592)
355 3q6k_A 43.2 kDa salivary prote 71.2 45 0.0015 28.0 17.2 145 140-292 124-306 (381)
356 4gq2_M Nucleoporin NUP120; bet 70.9 5.2 0.00018 38.3 5.3 33 263-296 238-270 (950)
357 4fhn_B Nucleoporin NUP120; pro 69.9 4.6 0.00016 39.5 4.9 39 161-199 239-277 (1139)
358 3f7f_A Nucleoporin NUP120; nuc 66.2 11 0.00038 34.6 6.1 36 162-199 224-259 (729)
359 3ott_A Two-component system se 60.8 1E+02 0.0035 28.3 19.1 147 119-291 473-625 (758)
360 4fhn_B Nucleoporin NUP120; pro 60.4 5.4 0.00018 39.0 3.3 33 263-296 240-272 (1139)
361 3f7f_A Nucleoporin NUP120; nuc 55.2 16 0.00056 33.5 5.2 31 263-296 224-254 (729)
362 4hvt_A Ritya.17583.B, post-pro 41.4 2.1E+02 0.0073 26.2 14.7 72 120-191 131-226 (711)
363 3no0_A DNA gyrase subunit A; D 38.2 1.5E+02 0.005 23.4 18.7 156 119-293 25-197 (276)
364 3qhy_B Beta-lactamase inhibito 31.8 1.9E+02 0.0064 22.8 11.6 65 119-189 64-128 (282)
365 3uc1_A DNA gyrase subunit A; D 30.6 2.2E+02 0.0074 23.1 18.2 116 160-293 95-229 (327)
366 4eqa_C PA1845 protein, putativ 26.9 1.4E+02 0.0046 19.6 7.6 15 14-28 19-33 (153)
367 3vpj_E TSE1-specific immunity 26.3 1.5E+02 0.0053 20.0 7.8 30 122-151 111-143 (192)
368 1b2p_A Protein (lectin); manno 24.7 1.6E+02 0.0055 19.7 9.6 14 263-276 94-107 (119)
369 3a0c_A Mannose/sialic acid-bin 23.1 1.6E+02 0.0056 19.2 10.2 24 263-292 84-107 (110)
370 3q6k_A 43.2 kDa salivary prote 21.4 3.6E+02 0.012 22.5 23.1 165 98-279 124-342 (381)
371 1q47_A Semaphorin 3A; beta pro 20.2 4.3E+02 0.015 22.9 8.8 50 237-287 427-487 (495)
No 1
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.8e-36 Score=253.78 Aligned_cols=241 Identities=13% Similarity=0.127 Sum_probs=190.6
Q ss_pred cceeeeCCCccEEEeccCCceeeEEEeeEEeeccccccccCCCCchhhhhhcccccchhhhhccCCCcccccccCCCCCC
Q psy3337 2 NCDVHSNGKNIYVVAGQENSNQLYKITAEFTQMNGVVKSKESNNTADTIVRKRKEKDKENAKQKGGKKEKSNEKGKNKKD 81 (297)
Q Consensus 2 ~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (297)
+|..|++++.+|++|+.|+.++||++..............+ -.........
T Consensus 17 ~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~-----------v~~~~~~~~~------------------ 67 (304)
T 2ynn_A 17 KGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETP-----------VRAGKFIARK------------------ 67 (304)
T ss_dssp EEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSC-----------EEEEEEEGGG------------------
T ss_pred EEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCc-----------EEEEEEeCCC------------------
Confidence 56679999999999999999999998653322100000000 0000000000
Q ss_pred CCCCCCCcCCCCCCCceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCC-eeeEEecccc
Q psy3337 82 KIEDPPILNSIDSKEKNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKM-KPLLHIEAHS 159 (297)
Q Consensus 82 ~~~~~~~l~~~~~~d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~-~~~~~~~~~~ 159 (297)
-+..+++.|++|++ ++.+++.+..+. +|...|.+++|+|++++|++|+.|++|++||++++ .....+.+|.
T Consensus 68 ------~~l~s~s~d~~i~vwd~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~ 140 (304)
T 2ynn_A 68 ------NWIIVGSDDFRIRVFNYNTGEKVVDFE-AHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHE 140 (304)
T ss_dssp ------TEEEEEETTSEEEEEETTTCCEEEEEE-CCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCC
T ss_pred ------CEEEEECCCCEEEEEECCCCcEEEEEe-CCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccC
Confidence 01557889999999 999999999998 99999999999999999999999999999999876 4567889999
Q ss_pred CCeeEEEEcc-CCCEEEEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeC--CCCeEEEEeccCcccc
Q psy3337 160 KEIDDVDFSI-SGEQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDS--PKRSRLFTLANPLAQN 236 (297)
Q Consensus 160 ~~v~~~~~sp-~~~~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s--~~~~~l~~~~~~~~~~ 236 (297)
..|.+++|+| ++.+|++++.|++|++||++++.....+..+... .+..+.++ +++.+|++
T Consensus 141 ~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~---------~v~~~~~~~~~~~~~l~s-------- 203 (304)
T 2ynn_A 141 HFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQER---------GVNYVDYYPLPDKPYMIT-------- 203 (304)
T ss_dssp SCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTT---------CEEEEEECCSTTCCEEEE--------
T ss_pred CcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcC---------cEEEEEEEEcCCCCEEEE--------
Confidence 9999999999 6789999999999999999887766555433211 11224455 47788888
Q ss_pred cCCCCeEEEEeCCCCceEEEeccCCC-eEEEEEcCCCCEEEEEecCCCeEEEEEeCCceec
Q psy3337 237 KRGISYVQQWDVDSGRLRLAREMKES-LSALAVRDDGRFVAVGTMFTGSVFVYIAFSLQMC 296 (297)
Q Consensus 237 g~~d~~i~~wd~~~~~~~~~~~~~~~-v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~~~~~ 296 (297)
|+.|+.|++||+++++++..+.+|.. |.+++|+|++.+|++|+. ||+|++||+.+++.+
T Consensus 204 ~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~-Dg~i~iWd~~~~~~~ 263 (304)
T 2ynn_A 204 ASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSE-DGTLKIWNSSTYKVE 263 (304)
T ss_dssp EETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEET-TSCEEEEETTTCCEE
T ss_pred EcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEEEEcC-CCeEEEEECCCCcee
Confidence 45599999999999999999999877 999999999999999999 999999999988764
No 2
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=3.6e-36 Score=256.21 Aligned_cols=190 Identities=14% Similarity=0.193 Sum_probs=159.7
Q ss_pred CCCCCCCceEEE-EeeCCCeEEEEe---cCCCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCeeeEEeccccCCeeEE
Q psy3337 90 NSIDSKEKNLRF-GFKTFDSVQTVF---AGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDV 165 (297)
Q Consensus 90 ~~~~~~d~~i~~-~~~~~~~~~~~~---~~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~ 165 (297)
..+++.|++|+| ++.+++.+..+. .+|...|++++|+|+|++|++|+.|++|++||+++++++..+.+|...|.++
T Consensus 96 l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~ 175 (344)
T 4gqb_B 96 ILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCV 175 (344)
T ss_dssp EEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEE
T ss_pred EEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEE
Confidence 347889999999 898887654332 3899999999999999999999999999999999999999999999999999
Q ss_pred EEccCCC-EEEEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCC-eEEEEeccCcccccCCCCeE
Q psy3337 166 DFSISGE-QIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKR-SRLFTLANPLAQNKRGISYV 243 (297)
Q Consensus 166 ~~sp~~~-~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~-~~l~~~~~~~~~~g~~d~~i 243 (297)
+|+|++. +|++++.|++|++||+++++....+..+.+. ..+..++|+|++ .+|++ |+.|+.|
T Consensus 176 ~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~--------~~~~~~~~~p~~~~~l~s--------g~~dg~v 239 (344)
T 4gqb_B 176 AASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPG--------YLPTSLAWHPQQSEVFVF--------GDENGTV 239 (344)
T ss_dssp EECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----C--------CCEEEEEECSSCTTEEEE--------EETTSEE
T ss_pred EecCCCCCceeeeccccccccccccccceeeeeecceee--------ccceeeeecCCCCcceEE--------eccCCcE
Confidence 9999874 7899999999999999999888777543321 123347788854 56666 5569999
Q ss_pred EEEeCCCCceEEEeccCCC-eEEEEEcCCC-CEEEEEecCCCeEEEEEeCCceec
Q psy3337 244 QQWDVDSGRLRLAREMKES-LSALAVRDDG-RFVAVGTMFTGSVFVYIAFSLQMC 296 (297)
Q Consensus 244 ~~wd~~~~~~~~~~~~~~~-v~~~~~s~dg-~~l~~~~~~dg~i~vwd~~~~~~~ 296 (297)
++||+++++++..+.+|.. |++++|+|++ ++|++|+. |++|+|||+.+++.+
T Consensus 240 ~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~-D~~i~vwd~~~~~~~ 293 (344)
T 4gqb_B 240 SLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSE-DCSLAVLDSSLSELF 293 (344)
T ss_dssp EEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEET-TSCEEEECTTCCEEE
T ss_pred EEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeC-CCeEEEEECCCCcEE
Confidence 9999999999999999877 9999999998 57999999 999999999988764
No 3
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.1e-35 Score=251.08 Aligned_cols=235 Identities=12% Similarity=0.134 Sum_probs=193.6
Q ss_pred cceeeeCCCccEEEeccCCceeeEEEeeEEeeccccccccCCCCchhhhhhcccccchhhhhccCCCcccccccCCCCCC
Q psy3337 2 NCDVHSNGKNIYVVAGQENSNQLYKITAEFTQMNGVVKSKESNNTADTIVRKRKEKDKENAKQKGGKKEKSNEKGKNKKD 81 (297)
Q Consensus 2 ~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (297)
+|+.+++++.++++++.|+.++||++............... -....
T Consensus 84 ~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~-----------~~~~~----------------------- 129 (321)
T 3ow8_A 84 VSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVD-----------AWTLA----------------------- 129 (321)
T ss_dssp EEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTC-----------CCCEE-----------------------
T ss_pred EEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCcc-----------EEEEE-----------------------
Confidence 34557888899999999999999998654322100000000 00000
Q ss_pred CCCCCCCcCCCCCCCceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCeeeEEeccccC
Q psy3337 82 KIEDPPILNSIDSKEKNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSK 160 (297)
Q Consensus 82 ~~~~~~~l~~~~~~d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~ 160 (297)
..+..-...+++.|+.+++ ++.+++....+. .|...|.+++|+|++++|++|+.|+.|++||+++++.+..+.+|..
T Consensus 130 -~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~-~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~ 207 (321)
T 3ow8_A 130 -FSPDSQYLATGTHVGKVNIFGVESGKKEYSLD-TRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAM 207 (321)
T ss_dssp -ECTTSSEEEEECTTSEEEEEETTTCSEEEEEE-CSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSS
T ss_pred -ECCCCCEEEEEcCCCcEEEEEcCCCceeEEec-CCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCC
Confidence 0000111457888999999 999999888888 8999999999999999999999999999999999999999999999
Q ss_pred CeeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCC
Q psy3337 161 EIDDVDFSISGEQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGI 240 (297)
Q Consensus 161 ~v~~~~~sp~~~~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d 240 (297)
.|.+++|+|++++|++++.|++|++||++++..+..+..|.. .+..++|+|++.+|++++ .|
T Consensus 208 ~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~----------~v~~~~~sp~~~~l~s~s--------~D 269 (321)
T 3ow8_A 208 PIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHAS----------WVLNVAFCPDDTHFVSSS--------SD 269 (321)
T ss_dssp CCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSS----------CEEEEEECTTSSEEEEEE--------TT
T ss_pred ceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCC----------ceEEEEECCCCCEEEEEe--------CC
Confidence 999999999999999999999999999999988888877752 233588999999999854 49
Q ss_pred CeEEEEeCCCCceEEEeccCCC-eEEEEEcCCCCEEEEEecCCCeEEEEEeC
Q psy3337 241 SYVQQWDVDSGRLRLAREMKES-LSALAVRDDGRFVAVGTMFTGSVFVYIAF 291 (297)
Q Consensus 241 ~~i~~wd~~~~~~~~~~~~~~~-v~~~~~s~dg~~l~~~~~~dg~i~vwd~~ 291 (297)
+.|++||+.+++++..+..|.. |.+++|+|+|.+|++++. ||.|++||+.
T Consensus 270 ~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~-d~~i~vwd~p 320 (321)
T 3ow8_A 270 KSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGD-DQEIHIYDCP 320 (321)
T ss_dssp SCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEET-TCCEEEEECC
T ss_pred CcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeC-CCeEEEEeCC
Confidence 9999999999999999988876 999999999999999999 9999999974
No 4
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=6.9e-36 Score=254.15 Aligned_cols=238 Identities=15% Similarity=0.146 Sum_probs=189.7
Q ss_pred cceeeeCCCccEEEeccCCceeeEEEeeEEeeccccccccCCCCchhhhhhcccccchhhhhccCCCcccccccCCCCCC
Q psy3337 2 NCDVHSNGKNIYVVAGQENSNQLYKITAEFTQMNGVVKSKESNNTADTIVRKRKEKDKENAKQKGGKKEKSNEKGKNKKD 81 (297)
Q Consensus 2 ~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (297)
.|+.|++++++|+++|.|+.+++|++......... . ....++....... .
T Consensus 101 ~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~-~-------~~~~~h~~~v~~~---------------------~- 150 (340)
T 1got_B 101 MTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRV-S-------RELAGHTGYLSCC---------------------R- 150 (340)
T ss_dssp EEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEE-E-------EEEECCSSCEEEE---------------------E-
T ss_pred EEEEECCCCCEEEEEeCCCeEEEEECccCCCccee-E-------EEecCCCccEEEE---------------------E-
Confidence 35568999999999999999999997542110000 0 0000000000000 0
Q ss_pred CCCCCCCcCCCCCCCceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCeeeEEeccccC
Q psy3337 82 KIEDPPILNSIDSKEKNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSK 160 (297)
Q Consensus 82 ~~~~~~~l~~~~~~d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~ 160 (297)
...+. ...+++.|++|++ ++.+++.+..+. +|...|.+++|+|++++|++|+.|+.|++||+++++.+..+.+|..
T Consensus 151 ~~~~~--~l~s~s~d~~i~~wd~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~ 227 (340)
T 1got_B 151 FLDDN--QIVTSSGDTTCALWDIETGQQTTTFT-GHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHES 227 (340)
T ss_dssp EEETT--EEEEEETTSCEEEEETTTTEEEEEEC-CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSS
T ss_pred ECCCC--cEEEEECCCcEEEEECCCCcEEEEEc-CCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcC
Confidence 00000 0346788999999 999999988888 9999999999999999999999999999999999999999999999
Q ss_pred CeeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCC
Q psy3337 161 EIDDVDFSISGEQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGI 240 (297)
Q Consensus 161 ~v~~~~~sp~~~~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d 240 (297)
.|.+++|+|++++|++++.|++|++||+++++.+..+..+... ..+..++|+|++.+|++ |+.|
T Consensus 228 ~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~--------~~v~~~~~s~~g~~l~~--------g~~d 291 (340)
T 1got_B 228 DINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNII--------CGITSVSFSKSGRLLLA--------GYDD 291 (340)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCC--------SCEEEEEECTTSSEEEE--------EETT
T ss_pred CEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcc--------cceEEEEECCCCCEEEE--------ECCC
Confidence 9999999999999999999999999999988877666432211 12445889999999999 4559
Q ss_pred CeEEEEeCCCCceEEEeccCCC-eEEEEEcCCCCEEEEEecCCCeEEEEE
Q psy3337 241 SYVQQWDVDSGRLRLAREMKES-LSALAVRDDGRFVAVGTMFTGSVFVYI 289 (297)
Q Consensus 241 ~~i~~wd~~~~~~~~~~~~~~~-v~~~~~s~dg~~l~~~~~~dg~i~vwd 289 (297)
+.|++||+.+++.+..+.+|.. |.+++|+|+|.+|++|+. |+.|+|||
T Consensus 292 ~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~-D~~i~iWd 340 (340)
T 1got_B 292 FNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSW-DSFLKIWN 340 (340)
T ss_dssp SEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEET-TSCEEEEC
T ss_pred CeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcC-CccEEecC
Confidence 9999999999999999999877 999999999999999999 99999996
No 5
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.8e-35 Score=249.70 Aligned_cols=187 Identities=17% Similarity=0.197 Sum_probs=171.4
Q ss_pred CCCCCCCceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCeeeEEeccccCCeeEEEEc
Q psy3337 90 NSIDSKEKNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFS 168 (297)
Q Consensus 90 ~~~~~~d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s 168 (297)
..+++.|++|++ ++.+++.+..+. .|...+.+++|+|++++|++|+.|+.|++||+++++....+..|...|.+++|+
T Consensus 95 l~s~s~D~~i~lWd~~~~~~~~~~~-~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~s 173 (321)
T 3ow8_A 95 AASSSLDAHIRLWDLENGKQIKSID-AGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYS 173 (321)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEE-CCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEEC
T ss_pred EEEEeCCCcEEEEECCCCCEEEEEe-CCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEEC
Confidence 457889999999 999999998888 888889999999999999999999999999999999999999999999999999
Q ss_pred cCCCEEEEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeC
Q psy3337 169 ISGEQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDV 248 (297)
Q Consensus 169 p~~~~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~ 248 (297)
|++++|++++.|+.|++||+++++.+..+..|.. .+..++|+|++.+|++ |+.|+.|++||+
T Consensus 174 pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~----------~v~~l~~spd~~~l~s--------~s~dg~i~iwd~ 235 (321)
T 3ow8_A 174 PDGKYLASGAIDGIINIFDIATGKLLHTLEGHAM----------PIRSLTFSPDSQLLVT--------ASDDGYIKIYDV 235 (321)
T ss_dssp TTSSEEEEEETTSCEEEEETTTTEEEEEECCCSS----------CCCEEEECTTSCEEEE--------ECTTSCEEEEET
T ss_pred CCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCC----------ceeEEEEcCCCCEEEE--------EcCCCeEEEEEC
Confidence 9999999999999999999999999888877642 2345789999999998 455999999999
Q ss_pred CCCceEEEeccCCC-eEEEEEcCCCCEEEEEecCCCeEEEEEeCCceec
Q psy3337 249 DSGRLRLAREMKES-LSALAVRDDGRFVAVGTMFTGSVFVYIAFSLQMC 296 (297)
Q Consensus 249 ~~~~~~~~~~~~~~-v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~~~~~ 296 (297)
++++.+..+.+|.. |.+++|+|++.+|++++. |+.|++||+.+++++
T Consensus 236 ~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~-D~~v~iwd~~~~~~~ 283 (321)
T 3ow8_A 236 QHANLAGTLSGHASWVLNVAFCPDDTHFVSSSS-DKSVKVWDVGTRTCV 283 (321)
T ss_dssp TTCCEEEEECCCSSCEEEEEECTTSSEEEEEET-TSCEEEEETTTTEEE
T ss_pred CCcceeEEEcCCCCceEEEEECCCCCEEEEEeC-CCcEEEEeCCCCEEE
Confidence 99999999998887 999999999999999999 999999999988765
No 6
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=8.3e-36 Score=259.98 Aligned_cols=239 Identities=14% Similarity=0.203 Sum_probs=196.3
Q ss_pred cceeeeCCCccEEEeccCCceeeEEEeeEEeeccccccccCCCCchhhhhhccc-ccchhhhhccCCCcccccccCCCCC
Q psy3337 2 NCDVHSNGKNIYVVAGQENSNQLYKITAEFTQMNGVVKSKESNNTADTIVRKRK-EKDKENAKQKGGKKEKSNEKGKNKK 80 (297)
Q Consensus 2 ~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (297)
+|+.|++++.+|++|+.|+.++||++....... ..+++.... ...
T Consensus 112 ~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~------------~l~~h~~~V~~v~---------------------- 157 (410)
T 1vyh_C 112 TRVIFHPVFSVMVSASEDATIKVWDYETGDFER------------TLKGHTDSVQDIS---------------------- 157 (410)
T ss_dssp EEEEECSSSSEEEEEESSSCEEEEETTTCCCCE------------EECCCSSCEEEEE----------------------
T ss_pred EEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEE------------EEeccCCcEEEEE----------------------
Confidence 577799999999999999999999976432110 000000000 000
Q ss_pred CCCCCCCCcCCCCCCCceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCeeeEEecccc
Q psy3337 81 DKIEDPPILNSIDSKEKNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHS 159 (297)
Q Consensus 81 ~~~~~~~~l~~~~~~d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~ 159 (297)
..+..-+..+++.|++|++ ++.+++++..+. +|...|.+++|+|++++|++|+.|++|++||++++.++..+.+|.
T Consensus 158 --~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~-~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~ 234 (410)
T 1vyh_C 158 --FDHSGKLLASCSADMTIKLWDFQGFECIRTMH-GHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHR 234 (410)
T ss_dssp --ECTTSSEEEEEETTSCCCEEETTSSCEEECCC-CCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCS
T ss_pred --EcCCCCEEEEEeCCCeEEEEeCCCCceeEEEc-CCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCC
Confidence 0001112568899999999 899999988888 999999999999999999999999999999999999999999999
Q ss_pred CCeeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCC-----------------
Q psy3337 160 KEIDDVDFSISGEQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPK----------------- 222 (297)
Q Consensus 160 ~~v~~~~~sp~~~~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~----------------- 222 (297)
..|.++.|+|++.+|++++.|++|++||+++++....+..|... +..++|+|+
T Consensus 235 ~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~----------v~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (410)
T 1vyh_C 235 EWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHV----------VECISWAPESSYSSISEATGSETKKS 304 (410)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSC----------EEEEEECCSCGGGGGGGCCSCC----
T ss_pred ccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCce----------EEEEEEcCcccccchhhhcccccccc
Confidence 99999999999999999999999999999999888888776522 234667775
Q ss_pred ---CeEEEEeccCcccccCCCCeEEEEeCCCCceEEEeccCCC-eEEEEEcCCCCEEEEEecCCCeEEEEEeCCceec
Q psy3337 223 ---RSRLFTLANPLAQNKRGISYVQQWDVDSGRLRLAREMKES-LSALAVRDDGRFVAVGTMFTGSVFVYIAFSLQMC 296 (297)
Q Consensus 223 ---~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~-v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~~~~~ 296 (297)
+.+|++ |+.|+.|++||+++++++..+.+|.. |.+++|+|+|++|++|+. ||.|++||+.+++++
T Consensus 305 ~~~g~~l~s--------gs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~-D~~i~vwd~~~~~~~ 373 (410)
T 1vyh_C 305 GKPGPFLLS--------GSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCAD-DKTLRVWDYKNKRCM 373 (410)
T ss_dssp ---CCEEEE--------EETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEET-TTEEEEECCTTSCCC
T ss_pred CCCCCEEEE--------EeCCCeEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEEEEeC-CCeEEEEECCCCceE
Confidence 456666 66699999999999999999998887 999999999999999999 999999999887654
No 7
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=1.3e-34 Score=247.62 Aligned_cols=239 Identities=17% Similarity=0.186 Sum_probs=189.2
Q ss_pred cceeeeCCCccEEEeccCCceeeEEEeeEEeeccccccccCCCCchhhhhhcccccchhhhhccCCCcccccccCCCCCC
Q psy3337 2 NCDVHSNGKNIYVVAGQENSNQLYKITAEFTQMNGVVKSKESNNTADTIVRKRKEKDKENAKQKGGKKEKSNEKGKNKKD 81 (297)
Q Consensus 2 ~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (297)
.++.|+++|.+|+++|.|+.|++|++......... ...+.. ..+.....
T Consensus 110 ~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~---------------~~~~~~----------------~~h~~~v~ 158 (354)
T 2pbi_B 110 MACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMA---------------AKKKSV----------------AMHTNYLS 158 (354)
T ss_dssp CEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSG---------------GGCEEE----------------EECSSCEE
T ss_pred EEEEECCCCCEEEEeeCCCCEEEEEEecccccccc---------------ccceee----------------eccCCcEE
Confidence 45668999999999999999999987543111000 000000 00000000
Q ss_pred --CCCCCCCcCCCCCCCceEEE-EeeCCCeEEEEecCCCCcEEEEEEec--CCCEEEEEcCCCcEEEEeCCCCeeeEEec
Q psy3337 82 --KIEDPPILNSIDSKEKNLRF-GFKTFDSVQTVFAGSESLQRVVRLSR--NGDLMVTGGTDGHLRLWSFPKMKPLLHIE 156 (297)
Q Consensus 82 --~~~~~~~l~~~~~~d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~--~g~~l~s~~~d~~i~iwd~~~~~~~~~~~ 156 (297)
...+......+++.|++|++ ++.+++.+..+. +|...|.+++|+| ++++|++|+.|+.|++||+++++++..+.
T Consensus 159 ~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~-~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~ 237 (354)
T 2pbi_B 159 ACSFTNSDMQILTASGDGTCALWDVESGQLLQSFH-GHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFE 237 (354)
T ss_dssp EEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEE-CCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred EEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEc-CCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEec
Confidence 00000111447889999999 999999999998 9999999999988 57899999999999999999999999999
Q ss_pred cccCCeeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccc
Q psy3337 157 AHSKEIDDVDFSISGEQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQN 236 (297)
Q Consensus 157 ~~~~~v~~~~~sp~~~~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~ 236 (297)
+|...|.+++|+|++.+|++++.|++|++||++.+..+..+..+... ..+..++|+|++.+|++.
T Consensus 238 ~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~--------~~~~~~~~s~~g~~l~~g------- 302 (354)
T 2pbi_B 238 THESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESII--------FGASSVDFSLSGRLLFAG------- 302 (354)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCC--------SCEEEEEECTTSSEEEEE-------
T ss_pred CCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcc--------cceeEEEEeCCCCEEEEE-------
Confidence 99999999999999999999999999999999988776665433211 123357899999999984
Q ss_pred cCCCCeEEEEeCCCCceEEEeccCCC-eEEEEEcCCCCEEEEEecCCCeEEEEE
Q psy3337 237 KRGISYVQQWDVDSGRLRLAREMKES-LSALAVRDDGRFVAVGTMFTGSVFVYI 289 (297)
Q Consensus 237 g~~d~~i~~wd~~~~~~~~~~~~~~~-v~~~~~s~dg~~l~~~~~~dg~i~vwd 289 (297)
+.|+.|++||+.+++.+..+.+|.. |.+++|+|||++|++|+. |++|+||+
T Consensus 303 -~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~-D~~v~vW~ 354 (354)
T 2pbi_B 303 -YNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSW-DHTLRVWA 354 (354)
T ss_dssp -ETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEET-TSEEEEEC
T ss_pred -ECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcC-CCCEEecC
Confidence 4599999999999999999988877 999999999999999999 99999996
No 8
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=2.7e-34 Score=247.96 Aligned_cols=256 Identities=14% Similarity=0.194 Sum_probs=193.5
Q ss_pred cceeeeCCCccEEEeccCCceeeEEEeeEEeeccccccccCCCCchhhhhhcccccchhhhhccCCCcccccccCCCCCC
Q psy3337 2 NCDVHSNGKNIYVVAGQENSNQLYKITAEFTQMNGVVKSKESNNTADTIVRKRKEKDKENAKQKGGKKEKSNEKGKNKKD 81 (297)
Q Consensus 2 ~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (297)
.++.|+++|++|++||.|+.|+||++....... .. ....+.. .+.+... ..-.
T Consensus 112 ~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~------~~--------~~~~~~~--------~gh~~~v-----~~~~ 164 (380)
T 3iz6_a 112 MECAFAPNGQSVACGGLDSACSIFNLSSQADRD------GN--------MPVSRVL--------TGHKGYA-----SSCQ 164 (380)
T ss_dssp CCCEECTTSSEEEECCSSSCCEEEECCCCSSCC------CS--------STTCCBC--------CCCSSCC-----CCCB
T ss_pred EEEEECCCCCEEEEeeCCCcEEEEECCCCcccc------CC--------ccceeec--------cCCCcce-----EEEE
Confidence 455689999999999999999999986532110 00 0000000 0000000 0000
Q ss_pred CCCCCCCcCCCCCCCceEEE-EeeCCCeEEEEe----cCCCCcEEEEEEec-CCCEEEEEcCCCcEEEEeCC-CCeeeEE
Q psy3337 82 KIEDPPILNSIDSKEKNLRF-GFKTFDSVQTVF----AGSESLQRVVRLSR-NGDLMVTGGTDGHLRLWSFP-KMKPLLH 154 (297)
Q Consensus 82 ~~~~~~~l~~~~~~d~~i~~-~~~~~~~~~~~~----~~h~~~v~~~~~s~-~g~~l~s~~~d~~i~iwd~~-~~~~~~~ 154 (297)
..........+++.|++|++ |+.+++.+..+. .+|...|.+++|+| ++++|++|+.|+.|++||++ ..+.+..
T Consensus 165 ~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~ 244 (380)
T 3iz6_a 165 YVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRT 244 (380)
T ss_dssp CCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEE
T ss_pred EecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEE
Confidence 11111222557889999999 899999887762 37999999999987 78999999999999999998 5577889
Q ss_pred eccccCCeeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcc
Q psy3337 155 IEAHSKEIDDVDFSISGEQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLA 234 (297)
Q Consensus 155 ~~~~~~~v~~~~~sp~~~~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~ 234 (297)
+.+|...|.+++|+|++++|++++.|++|++||++++..+..+..+...... ....+..++|+|++.+|++
T Consensus 245 ~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~---~~~~v~~~~~s~~g~~l~~------ 315 (380)
T 3iz6_a 245 YHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDN---ELPIVTSVAFSISGRLLFA------ 315 (380)
T ss_dssp ECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCC---SSCSCSEEEECSSSSEEEE------
T ss_pred ECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEeccccccccc---ccCceEEEEECCCCCEEEE------
Confidence 9999999999999999999999999999999999999888877654311000 0112446889999999998
Q ss_pred cccCCCCeEEEEeCCCCceEEEe----ccCCC-eEEEEEcCCCCEEEEEecCCCeEEEEEeCCceec
Q psy3337 235 QNKRGISYVQQWDVDSGRLRLAR----EMKES-LSALAVRDDGRFVAVGTMFTGSVFVYIAFSLQMC 296 (297)
Q Consensus 235 ~~g~~d~~i~~wd~~~~~~~~~~----~~~~~-v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~~~~~ 296 (297)
|+.|+.|++||+..++.+..+ .+|.. |.+++|+|||.+|++|+. |++|++|++...+.+
T Consensus 316 --g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~-D~~i~iW~~~~~~~i 379 (380)
T 3iz6_a 316 --GYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSW-DKNLKIWAFSGHRKI 379 (380)
T ss_dssp --ECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECT-TSCEEEEECCSSSSC
T ss_pred --EECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeC-CCCEEEEecCCCccc
Confidence 555999999999998888776 45666 999999999999999999 999999999877643
No 9
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.2e-34 Score=252.56 Aligned_cols=235 Identities=14% Similarity=0.177 Sum_probs=192.3
Q ss_pred cceeeeCCCccEEEeccCCceeeEEEeeEEeeccccccccCCCCchhhhhhcccccchhhhhccCCCcccccccCCCCCC
Q psy3337 2 NCDVHSNGKNIYVVAGQENSNQLYKITAEFTQMNGVVKSKESNNTADTIVRKRKEKDKENAKQKGGKKEKSNEKGKNKKD 81 (297)
Q Consensus 2 ~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (297)
+|+.|++++++|++|+.|+.|+||++....... ...++...- .. .
T Consensus 154 ~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~------------~~~~h~~~V-----~~-------------v----- 198 (410)
T 1vyh_C 154 QDISFDHSGKLLASCSADMTIKLWDFQGFECIR------------TMHGHDHNV-----SS-------------V----- 198 (410)
T ss_dssp EEEEECTTSSEEEEEETTSCCCEEETTSSCEEE------------CCCCCSSCE-----EE-------------E-----
T ss_pred EEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeE------------EEcCCCCCE-----EE-------------E-----
Confidence 456688999999999999999999985432110 000000000 00 0
Q ss_pred CCCCCCCcCCCCCCCceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCeeeEEeccccC
Q psy3337 82 KIEDPPILNSIDSKEKNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSK 160 (297)
Q Consensus 82 ~~~~~~~l~~~~~~d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~ 160 (297)
...+..-...+++.|++|++ ++.++.++..+. +|...|.++.|+|++++|++|+.|+.|++||+.+++....+.+|..
T Consensus 199 ~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~-~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~ 277 (410)
T 1vyh_C 199 SIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT-GHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRH 277 (410)
T ss_dssp EECSSSSEEEEEETTSEEEEEETTTCCEEEEEE-CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSS
T ss_pred EEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEe-CCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCc
Confidence 00000111457889999999 999999999998 9999999999999999999999999999999999999999999999
Q ss_pred CeeEEEEccC--------------------CCEEEEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeC
Q psy3337 161 EIDDVDFSIS--------------------GEQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDS 220 (297)
Q Consensus 161 ~v~~~~~sp~--------------------~~~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 220 (297)
.|.+++|+|+ +.+|++++.|++|++||++++.++..+.+|.. .+..++|+
T Consensus 278 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~----------~v~~v~~~ 347 (410)
T 1vyh_C 278 VVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN----------WVRGVLFH 347 (410)
T ss_dssp CEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSS----------CEEEEEEC
T ss_pred eEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCC----------cEEEEEEc
Confidence 9999999996 67899999999999999999999988887752 23357899
Q ss_pred CCCeEEEEeccCcccccCCCCeEEEEeCCCCceEEEeccCCC-eEEEEEcCCCCEEEEEecCCCeEEEEEeC
Q psy3337 221 PKRSRLFTLANPLAQNKRGISYVQQWDVDSGRLRLAREMKES-LSALAVRDDGRFVAVGTMFTGSVFVYIAF 291 (297)
Q Consensus 221 ~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~-v~~~~~s~dg~~l~~~~~~dg~i~vwd~~ 291 (297)
|++.+|++++ .|+.|++||+.+++++..+.+|.. |++++|+|++.+|++|+. ||.|++|+++
T Consensus 348 ~~g~~l~s~s--------~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~-D~~i~vW~~r 410 (410)
T 1vyh_C 348 SGGKFILSCA--------DDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSV-DQTVKVWECR 410 (410)
T ss_dssp SSSSCEEEEE--------TTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEET-TSEEEEEC--
T ss_pred CCCCEEEEEe--------CCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEEEEeC-CCcEEEEeCC
Confidence 9999999854 599999999999999999998877 999999999999999999 9999999864
No 10
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1e-33 Score=240.81 Aligned_cols=239 Identities=12% Similarity=0.129 Sum_probs=188.8
Q ss_pred cceeeeCCCccEEEeccCCceeeEEEeeEEeeccccccccCCCCchhhhhhcccccchhhhhccCCCcccccccCCCCCC
Q psy3337 2 NCDVHSNGKNIYVVAGQENSNQLYKITAEFTQMNGVVKSKESNNTADTIVRKRKEKDKENAKQKGGKKEKSNEKGKNKKD 81 (297)
Q Consensus 2 ~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (297)
+|..|++++++|++|+.|+.++||++............... -.....
T Consensus 59 ~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~-----------v~~~~~---------------------- 105 (340)
T 1got_B 59 YAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSW-----------VMTCAY---------------------- 105 (340)
T ss_dssp EEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSC-----------EEEEEE----------------------
T ss_pred EEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCcc-----------EEEEEE----------------------
Confidence 45668999999999999999999987543211000000000 000000
Q ss_pred CCCCCCCcCCCCCCCceEEE-EeeCCC----eEEEEecCCCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCeeeEEec
Q psy3337 82 KIEDPPILNSIDSKEKNLRF-GFKTFD----SVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIE 156 (297)
Q Consensus 82 ~~~~~~~l~~~~~~d~~i~~-~~~~~~----~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~ 156 (297)
.+..-+..+++.|+.+++ ++.++. ....+. +|...|.++.|++++. +++++.|+.|++||+++++.+..+.
T Consensus 106 --s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~ 181 (340)
T 1got_B 106 --APSGNYVACGGLDNICSIYNLKTREGNVRVSRELA-GHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFT 181 (340)
T ss_dssp --CTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEE-CCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEEC
T ss_pred --CCCCCEEEEEeCCCeEEEEECccCCCcceeEEEec-CCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEc
Confidence 000112457888999999 776653 344555 9999999999999875 8899999999999999999999999
Q ss_pred cccCCeeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccc
Q psy3337 157 AHSKEIDDVDFSISGEQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQN 236 (297)
Q Consensus 157 ~~~~~v~~~~~sp~~~~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~ 236 (297)
+|...|.+++|+|++++|++++.|++|++||++++..+..+..|.. .+..++|+|++.+|+++
T Consensus 182 ~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~----------~v~~v~~~p~~~~l~s~------- 244 (340)
T 1got_B 182 GHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHES----------DINAICFFPNGNAFATG------- 244 (340)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSS----------CEEEEEECTTSSEEEEE-------
T ss_pred CCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcC----------CEEEEEEcCCCCEEEEE-------
Confidence 9999999999999999999999999999999999998888877652 23458899999999985
Q ss_pred cCCCCeEEEEeCCCCceEEEeccCC---CeEEEEEcCCCCEEEEEecCCCeEEEEEeCCceec
Q psy3337 237 KRGISYVQQWDVDSGRLRLAREMKE---SLSALAVRDDGRFVAVGTMFTGSVFVYIAFSLQMC 296 (297)
Q Consensus 237 g~~d~~i~~wd~~~~~~~~~~~~~~---~v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~~~~~ 296 (297)
+.|+.|++||+++++.+..+..+. .|.+++|+|+|++|++|+. ||.|++||+.+++.+
T Consensus 245 -s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~-d~~i~vwd~~~~~~~ 305 (340)
T 1got_B 245 -SDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYD-DFNCNVWDALKADRA 305 (340)
T ss_dssp -ETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEET-TSEEEEEETTTCCEE
T ss_pred -cCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECC-CCeEEEEEcccCcEe
Confidence 459999999999988887776543 4999999999999999999 999999999887653
No 11
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=7.4e-34 Score=241.90 Aligned_cols=184 Identities=12% Similarity=0.040 Sum_probs=154.0
Q ss_pred CCCCCCCceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCC-CEEEEEcCCCcEEEEeCCCCeeeEEec--cccCCeeEE
Q psy3337 90 NSIDSKEKNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNG-DLMVTGGTDGHLRLWSFPKMKPLLHIE--AHSKEIDDV 165 (297)
Q Consensus 90 ~~~~~~d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g-~~l~s~~~d~~i~iwd~~~~~~~~~~~--~~~~~v~~~ 165 (297)
..+++.|++|++ ++.+++.+..+. +|...|++++|+|++ .+|++|+.|++|++||+++++....+. .|...+.++
T Consensus 142 l~sgs~d~~i~iwd~~~~~~~~~~~-~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 220 (344)
T 4gqb_B 142 AVSGSKDICIKVWDLAQQVVLSSYR-AHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSL 220 (344)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEEC-CCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEE
T ss_pred EEEEeCCCeEEEEECCCCcEEEEEc-CcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceee
Confidence 557899999999 999999999998 999999999999988 578999999999999999998887764 455679999
Q ss_pred EEccC-CCEEEEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCe-EEEEeccCcccccCCCCeE
Q psy3337 166 DFSIS-GEQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRS-RLFTLANPLAQNKRGISYV 243 (297)
Q Consensus 166 ~~sp~-~~~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~-~l~~~~~~~~~~g~~d~~i 243 (297)
+|+|+ +++|++++.|++|++||+++++++..+..|.. .+..++|+|++. +|++ |+.|+.|
T Consensus 221 ~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~----------~v~~v~fsp~g~~~las--------gs~D~~i 282 (344)
T 4gqb_B 221 AWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQ----------CVTGLVFSPHSVPFLAS--------LSEDCSL 282 (344)
T ss_dssp EECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSS----------CEEEEEECSSSSCCEEE--------EETTSCE
T ss_pred eecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCC----------CEEEEEEccCCCeEEEE--------EeCCCeE
Confidence 99994 57889999999999999999999999888752 234588999984 6777 5559999
Q ss_pred EEEeCCCCceEEEeccCCC-eEEEEEcCCCC-EEEEEecCCCeEEEEEeCCce
Q psy3337 244 QQWDVDSGRLRLAREMKES-LSALAVRDDGR-FVAVGTMFTGSVFVYIAFSLQ 294 (297)
Q Consensus 244 ~~wd~~~~~~~~~~~~~~~-v~~~~~s~dg~-~l~~~~~~dg~i~vwd~~~~~ 294 (297)
++||+.+++++. +.+|.. |++++|+|++. +|++++. |++|++|++.+..
T Consensus 283 ~vwd~~~~~~~~-~~~H~~~V~~v~~sp~~~~llas~s~-D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 283 AVLDSSLSELFR-SQAHRDFVRDATWSPLNHSLLTTVGW-DHQVVHHVVPTEP 333 (344)
T ss_dssp EEECTTCCEEEE-ECCCSSCEEEEEECSSSTTEEEEEET-TSCEEEEECCC--
T ss_pred EEEECCCCcEEE-EcCCCCCEEEEEEeCCCCeEEEEEcC-CCeEEEEECCCCC
Confidence 999999888664 566666 99999999986 5678999 9999999997643
No 12
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=3.6e-33 Score=238.70 Aligned_cols=241 Identities=13% Similarity=0.129 Sum_probs=189.0
Q ss_pred CcceeeeCCCccEEEeccCCceeeEEEeeEEeeccccccccCCCCchhhhhhcccccchhhhhccCCCcccccccCCCCC
Q psy3337 1 MNCDVHSNGKNIYVVAGQENSNQLYKITAEFTQMNGVVKSKESNNTADTIVRKRKEKDKENAKQKGGKKEKSNEKGKNKK 80 (297)
Q Consensus 1 ~~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (297)
++|+.|++++++|++|+.|+.++||+............ ... .-....
T Consensus 67 V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~-~~~----------~v~~~~---------------------- 113 (354)
T 2pbi_B 67 VLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTM-PCT----------WVMACA---------------------- 113 (354)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEEC-SSS----------CCCEEE----------------------
T ss_pred EEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEec-CCC----------CEEEEE----------------------
Confidence 35777999999999999999999998643221100000 000 000000
Q ss_pred CCCCCCCCcCCCCCCCceEEE-EeeCC------CeEEEEecCCCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCeeeE
Q psy3337 81 DKIEDPPILNSIDSKEKNLRF-GFKTF------DSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLL 153 (297)
Q Consensus 81 ~~~~~~~~l~~~~~~d~~i~~-~~~~~------~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~ 153 (297)
..+...+..+++.|+.+++ ++... .....+. +|...|.+++|+|++..|++++.|++|++||+++++.+.
T Consensus 114 --~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~ 190 (354)
T 2pbi_B 114 --YAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVA-MHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQ 190 (354)
T ss_dssp --ECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEE-ECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEE
T ss_pred --ECCCCCEEEEeeCCCCEEEEEEeccccccccccceeee-ccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEE
Confidence 0001112457888999999 65433 2344555 899999999999999999999999999999999999999
Q ss_pred EeccccCCeeEEEEcc--CCCEEEEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEecc
Q psy3337 154 HIEAHSKEIDDVDFSI--SGEQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLAN 231 (297)
Q Consensus 154 ~~~~~~~~v~~~~~sp--~~~~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~ 231 (297)
.+.+|...|.+++|+| ++++|++++.|++|++||+++++.+..+..|.. .+..++|+|++.+|++++
T Consensus 191 ~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~----------~v~~v~~~p~~~~l~s~s- 259 (354)
T 2pbi_B 191 SFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHES----------DVNSVRYYPSGDAFASGS- 259 (354)
T ss_dssp EEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSS----------CEEEEEECTTSSEEEEEE-
T ss_pred EEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCC----------CeEEEEEeCCCCEEEEEe-
Confidence 9999999999999988 578999999999999999999999888877652 234588999999999854
Q ss_pred CcccccCCCCeEEEEeCCCCceEEEeccCC---CeEEEEEcCCCCEEEEEecCCCeEEEEEeCCceec
Q psy3337 232 PLAQNKRGISYVQQWDVDSGRLRLAREMKE---SLSALAVRDDGRFVAVGTMFTGSVFVYIAFSLQMC 296 (297)
Q Consensus 232 ~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~---~v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~~~~~ 296 (297)
.|+.|++||++.++.+..+..+. .+.+++|+|+|++|++|+. |+.|++||+.+++.+
T Consensus 260 -------~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~-d~~i~vwd~~~~~~~ 319 (354)
T 2pbi_B 260 -------DDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYN-DYTINVWDVLKGSRV 319 (354)
T ss_dssp -------TTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEET-TSCEEEEETTTCSEE
T ss_pred -------CCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEEC-CCcEEEEECCCCceE
Confidence 59999999999988877776543 3899999999999999999 999999999887654
No 13
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=3.2e-34 Score=245.52 Aligned_cols=188 Identities=15% Similarity=0.230 Sum_probs=153.7
Q ss_pred CCCCCceEEE-EeeCCCeEEEE---ecCCCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCeeeEEeccccCCeeEEEE
Q psy3337 92 IDSKEKNLRF-GFKTFDSVQTV---FAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDF 167 (297)
Q Consensus 92 ~~~~d~~i~~-~~~~~~~~~~~---~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~ 167 (297)
+++.|++|+| ++.+++..... ..+|...|++++|+|++++|++|+.|+.|++||+++++.+..+.+|...|.+++|
T Consensus 110 ~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~ 189 (357)
T 4g56_B 110 VASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAA 189 (357)
T ss_dssp EEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE
T ss_pred EEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEE
Confidence 5678999999 88887654321 1389999999999999999999999999999999999999999999999999999
Q ss_pred ccCCC-EEEEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCC-eEEEEeccCcccccCCCCeEEE
Q psy3337 168 SISGE-QIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKR-SRLFTLANPLAQNKRGISYVQQ 245 (297)
Q Consensus 168 sp~~~-~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~-~~l~~~~~~~~~~g~~d~~i~~ 245 (297)
+|++. +|++++.|++|++||+++++.+..+..+... ..+..++|+|++ .+|++ |+.|+.|++
T Consensus 190 s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~--------~~v~~v~~sp~~~~~la~--------g~~d~~i~~ 253 (357)
T 4g56_B 190 CPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASD--------TIPTSVTWHPEKDDTFAC--------GDETGNVSL 253 (357)
T ss_dssp CTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCC--------SCEEEEEECTTSTTEEEE--------EESSSCEEE
T ss_pred ccCCCceeeeeccCCceEEEECCCCceeeeeeecccc--------ccccchhhhhcccceEEE--------eecccceeE
Confidence 99875 7899999999999999998877666543321 123357899985 45666 555999999
Q ss_pred EeCCCCceEEEeccCCC-eEEEEEcCCC-CEEEEEecCCCeEEEEEeCCceec
Q psy3337 246 WDVDSGRLRLAREMKES-LSALAVRDDG-RFVAVGTMFTGSVFVYIAFSLQMC 296 (297)
Q Consensus 246 wd~~~~~~~~~~~~~~~-v~~~~~s~dg-~~l~~~~~~dg~i~vwd~~~~~~~ 296 (297)
||+++++++..+..+.. |++++|+|++ ++|++|+. |++|+|||+.+++.+
T Consensus 254 wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~-D~~i~iwd~~~~~~~ 305 (357)
T 4g56_B 254 VNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISE-DCTVAVLDADFSEVF 305 (357)
T ss_dssp EESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEET-TSCEEEECTTSCEEE
T ss_pred EECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeC-CCEEEEEECCCCcEe
Confidence 99999999999998877 9999999987 57899999 999999999998765
No 14
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=8e-33 Score=232.15 Aligned_cols=243 Identities=15% Similarity=0.195 Sum_probs=190.0
Q ss_pred cceeeeCCCccEEEeccCCceeeEEEeeEEeeccccccccCCCCchhhhhhcc-cccchhhhhccCCCcccccccCCCCC
Q psy3337 2 NCDVHSNGKNIYVVAGQENSNQLYKITAEFTQMNGVVKSKESNNTADTIVRKR-KEKDKENAKQKGGKKEKSNEKGKNKK 80 (297)
Q Consensus 2 ~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (297)
+|..|++++++|++|+.|+.++||++......... .++... ....
T Consensus 27 ~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~------------~~h~~~v~~~~---------------------- 72 (312)
T 4ery_A 27 SSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI------------SGHKLGISDVA---------------------- 72 (312)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEE------------CCCSSCEEEEE----------------------
T ss_pred EEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhh------------ccCCCceEEEE----------------------
Confidence 56678999999999999999999987543221000 000000 0000
Q ss_pred CCCCCCCCcCCCCCCCceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCeeeEEecccc
Q psy3337 81 DKIEDPPILNSIDSKEKNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHS 159 (297)
Q Consensus 81 ~~~~~~~~l~~~~~~d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~ 159 (297)
-.+..-+..+++.|+.|++ ++.+++.+..+. +|...|.+++|+|++++|++|+.|+.|++||+++++.+..+..|.
T Consensus 73 --~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~ 149 (312)
T 4ery_A 73 --WSSDSNLLVSASDDKTLKIWDVSSGKCLKTLK-GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHS 149 (312)
T ss_dssp --ECTTSSEEEEEETTSEEEEEETTTCCEEEEEE-CCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCS
T ss_pred --EcCCCCEEEEECCCCEEEEEECCCCcEEEEEc-CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCC
Confidence 0000112457889999999 999999999988 999999999999999999999999999999999999999999999
Q ss_pred CCeeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccC-------
Q psy3337 160 KEIDDVDFSISGEQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANP------- 232 (297)
Q Consensus 160 ~~v~~~~~sp~~~~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~------- 232 (297)
..|.+++|+|++++|++++.|+.|++||+++++.+..+..+... .+..++|+|++.+|++.+..
T Consensus 150 ~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~l~~~~~d~~i~iwd 220 (312)
T 4ery_A 150 DPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP---------PVSFVKFSPNGKYILAATLDNTLKLWD 220 (312)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCC---------CEEEEEECTTSSEEEEEETTTEEEEEE
T ss_pred CcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCC---------ceEEEEECCCCCEEEEEcCCCeEEEEE
Confidence 99999999999999999999999999999988877665432210 11224455655555544321
Q ss_pred ------------------------------cccccCCCCeEEEEeCCCCceEEEeccCCC-eEEEEEcCCCCEEEEEe--
Q psy3337 233 ------------------------------LAQNKRGISYVQQWDVDSGRLRLAREMKES-LSALAVRDDGRFVAVGT-- 279 (297)
Q Consensus 233 ------------------------------~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~-v~~~~~s~dg~~l~~~~-- 279 (297)
++++|+.|+.|++||+.+++.+..+.+|.. |.+++|+|++.+|++++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~ 300 (312)
T 4ery_A 221 YSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALE 300 (312)
T ss_dssp TTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSSEEEEEECT
T ss_pred CCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCcCCceEEEEcc
Confidence 356788899999999999999999998877 99999999999999987
Q ss_pred cCCCeEEEEEeC
Q psy3337 280 MFTGSVFVYIAF 291 (297)
Q Consensus 280 ~~dg~i~vwd~~ 291 (297)
. |+.|++|+..
T Consensus 301 ~-d~~i~~W~~d 311 (312)
T 4ery_A 301 N-DKTIKLWKSD 311 (312)
T ss_dssp T-TCCEEEEECC
T ss_pred C-CccEEEecCC
Confidence 6 9999999864
No 15
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=2.6e-32 Score=230.06 Aligned_cols=235 Identities=17% Similarity=0.188 Sum_probs=184.1
Q ss_pred cceeeeCCCccEEEeccCCceeeEEEeeEEeeccccccccCCCCchhhhhhcccccchhhhhccCCCcccccccCCCCCC
Q psy3337 2 NCDVHSNGKNIYVVAGQENSNQLYKITAEFTQMNGVVKSKESNNTADTIVRKRKEKDKENAKQKGGKKEKSNEKGKNKKD 81 (297)
Q Consensus 2 ~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (297)
+|+.|++++++|++|+.|+.++||++........ ..++...-..-
T Consensus 69 ~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~------------~~~h~~~v~~~----------------------- 113 (319)
T 3frx_A 69 QDCTLTADGAYALSASWDKTLRLWDVATGETYQR------------FVGHKSDVMSV----------------------- 113 (319)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEETTTTEEEEE------------EECCSSCEEEE-----------------------
T ss_pred EEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEE------------EccCCCcEEEE-----------------------
Confidence 4566899999999999999999999865432110 00000000000
Q ss_pred CCCCCCCcCCCCCCCceEEEEeeCCCeEEEEecCCCCcEEEEEEecC------CCEEEEEcCCCcEEEEeCCCCeeeEEe
Q psy3337 82 KIEDPPILNSIDSKEKNLRFGFKTFDSVQTVFAGSESLQRVVRLSRN------GDLMVTGGTDGHLRLWSFPKMKPLLHI 155 (297)
Q Consensus 82 ~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~~------g~~l~s~~~d~~i~iwd~~~~~~~~~~ 155 (297)
...+..-+..+++.|++|+++-..++.+..+. +|...|.++.|+|. +..|++++.|+.|++||+++.+....+
T Consensus 114 ~~~~~~~~l~s~s~D~~i~vwd~~~~~~~~~~-~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~ 192 (319)
T 3frx_A 114 DIDKKASMIISGSRDKTIKVWTIKGQCLATLL-GHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADF 192 (319)
T ss_dssp EECTTSCEEEEEETTSCEEEEETTSCEEEEEC-CCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred EEcCCCCEEEEEeCCCeEEEEECCCCeEEEEe-ccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheee
Confidence 00001112558899999999434567778887 99999999999985 458999999999999999999999999
Q ss_pred ccccCCeeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCccc
Q psy3337 156 EAHSKEIDDVDFSISGEQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQ 235 (297)
Q Consensus 156 ~~~~~~v~~~~~sp~~~~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~ 235 (297)
.+|...|.+++|+|++++|++++.|++|++||+.+++.+..+..+. .+..++|+|++..+++..
T Consensus 193 ~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-----------~v~~~~~sp~~~~la~~~----- 256 (319)
T 3frx_A 193 IGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQD-----------EVFSLAFSPNRYWLAAAT----- 256 (319)
T ss_dssp CCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECCS-----------CEEEEEECSSSSEEEEEE-----
T ss_pred cCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCC-----------cEEEEEEcCCCCEEEEEc-----
Confidence 9999999999999999999999999999999999998888876542 234588999999988754
Q ss_pred ccCCCCeEEEEeCCCCceEEEecc--------CC-CeEEEEEcCCCCEEEEEecCCCeEEEEEeCCc
Q psy3337 236 NKRGISYVQQWDVDSGRLRLAREM--------KE-SLSALAVRDDGRFVAVGTMFTGSVFVYIAFSL 293 (297)
Q Consensus 236 ~g~~d~~i~~wd~~~~~~~~~~~~--------~~-~v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~~ 293 (297)
+..+++|++..+..+..+.. +. .+.+++|+|||++|++|+. ||.|+|||+.++
T Consensus 257 ----~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~-Dg~i~vWd~~t~ 318 (319)
T 3frx_A 257 ----ATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYT-DNVIRVWQVMTA 318 (319)
T ss_dssp ----TTEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEET-TSCEEEEEEEEC
T ss_pred ----CCCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeec-CceEEEEEEeec
Confidence 45699999998777666542 22 3899999999999999999 999999999875
No 16
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.4e-32 Score=235.35 Aligned_cols=184 Identities=15% Similarity=0.089 Sum_probs=156.4
Q ss_pred CCCCCCCceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCC-CEEEEEcCCCcEEEEeCCCCeeeEEe--ccccCCeeEE
Q psy3337 90 NSIDSKEKNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNG-DLMVTGGTDGHLRLWSFPKMKPLLHI--EAHSKEIDDV 165 (297)
Q Consensus 90 ~~~~~~d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g-~~l~s~~~d~~i~iwd~~~~~~~~~~--~~~~~~v~~~ 165 (297)
..+++.|++|++ ++.+++.+..+. +|...|++++|+|++ .++++++.|+.|++||+++++++..+ ..|...+.++
T Consensus 154 l~sgs~dg~v~iwd~~~~~~~~~~~-~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v 232 (357)
T 4g56_B 154 AVSGGKDFSVKVWDLSQKAVLKSYN-AHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSV 232 (357)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEEC-CCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEE
T ss_pred EEEEeCCCeEEEEECCCCcEEEEEc-CCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccch
Confidence 457889999999 999999999888 999999999999987 47899999999999999988876554 4567789999
Q ss_pred EEccC-CCEEEEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCe-EEEEeccCcccccCCCCeE
Q psy3337 166 DFSIS-GEQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRS-RLFTLANPLAQNKRGISYV 243 (297)
Q Consensus 166 ~~sp~-~~~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~-~l~~~~~~~~~~g~~d~~i 243 (297)
+|+|+ +.+|++++.|+.|++||+++++.+..+..|.. .+..++|+|++. +|++ |+.|+.|
T Consensus 233 ~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~----------~v~~l~~sp~~~~~las--------gs~D~~i 294 (357)
T 4g56_B 233 TWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQ----------NITGLAYSYHSSPFLAS--------ISEDCTV 294 (357)
T ss_dssp EECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSS----------CEEEEEECSSSSCCEEE--------EETTSCE
T ss_pred hhhhcccceEEEeecccceeEEECCCCcEeEEEeccce----------eEEEEEEcCCCCCEEEE--------EeCCCEE
Confidence 99997 56889999999999999999998888877642 234578999874 6777 4559999
Q ss_pred EEEeCCCCceEEEeccCCCeEEEEEcC-CCCEEEEEecCCCeEEEEEeCCc
Q psy3337 244 QQWDVDSGRLRLAREMKESLSALAVRD-DGRFVAVGTMFTGSVFVYIAFSL 293 (297)
Q Consensus 244 ~~wd~~~~~~~~~~~~~~~v~~~~~s~-dg~~l~~~~~~dg~i~vwd~~~~ 293 (297)
++||+.+++++..+.+...|++++|+| |+.+|++++. ||+|++|++.+.
T Consensus 295 ~iwd~~~~~~~~~~~H~~~V~~vafsP~d~~~l~s~s~-Dg~v~iW~~~~~ 344 (357)
T 4g56_B 295 AVLDADFSEVFRDLSHRDFVTGVAWSPLDHSKFTTVGW-DHKVLHHHLPSE 344 (357)
T ss_dssp EEECTTSCEEEEECCCSSCEEEEEECSSSTTEEEEEET-TSCEEEEECC--
T ss_pred EEEECCCCcEeEECCCCCCEEEEEEeCCCCCEEEEEcC-CCeEEEEECCCC
Confidence 999999999887775444599999998 8999999999 999999999764
No 17
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1.2e-32 Score=239.98 Aligned_cols=247 Identities=10% Similarity=0.070 Sum_probs=194.2
Q ss_pred ceeeeCCCccEEEeccCCceeeEEEeeEEeeccccccccCCCCchhhhhhcccccchhhhhccCCCcccccccCCCCCCC
Q psy3337 3 CDVHSNGKNIYVVAGQENSNQLYKITAEFTQMNGVVKSKESNNTADTIVRKRKEKDKENAKQKGGKKEKSNEKGKNKKDK 82 (297)
Q Consensus 3 ~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (297)
+..|++++++|++++.|+.+++|++.......... .........
T Consensus 61 ~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~------------~~~~~~~~~------------------------ 104 (420)
T 3vl1_A 61 GNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLK------------RADYTAVDT------------------------ 104 (420)
T ss_dssp TCEEEEEETTEEEEEETTEEEEEECCSEETTTTSC------------SCCEEEEEE------------------------
T ss_pred ceeeeecCCeEEEEEcCCcEEEEEecccceeeEEe------------cCCceEEEE------------------------
Confidence 45689999999999999999999987654321000 000000000
Q ss_pred CCCCCCcCCCCCCCceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCeeeEEeccccCC
Q psy3337 83 IEDPPILNSIDSKEKNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKE 161 (297)
Q Consensus 83 ~~~~~~l~~~~~~d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~ 161 (297)
.....-+..+++.|+.|++ ++.+++....+. +|...|++++|+|++++|++|+.|+.|++||+.+++.+..+.+|...
T Consensus 105 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~ 183 (420)
T 3vl1_A 105 AKLQMRRFILGTTEGDIKVLDSNFNLQREIDQ-AHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRAT 183 (420)
T ss_dssp ECSSSCEEEEEETTSCEEEECTTSCEEEEETT-SSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSC
T ss_pred EecCCCEEEEEECCCCEEEEeCCCcceeeecc-cccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCc
Confidence 0000112457788999999 888887777666 99999999999999999999999999999999999999999999999
Q ss_pred eeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeeccCCCC---ceEEEE-----------eeeeeeeeeCCCCeEEE
Q psy3337 162 IDDVDFSISGEQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDN---IKYLFK-----------RCRYGLVEDSPKRSRLF 227 (297)
Q Consensus 162 v~~~~~sp~~~~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~---~~~~~~-----------~~~~~~~~~s~~~~~l~ 227 (297)
|.+++|+|++++|++++.|+.|++||+++++.+..+..+.... ....+. ...+..++|+|++.+|+
T Consensus 184 v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 263 (420)
T 3vl1_A 184 VTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVI 263 (420)
T ss_dssp EEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEE
T ss_pred EEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEE
Confidence 9999999999999999999999999999999988887653111 011111 13345678999999999
Q ss_pred EeccCcccccCCCCeEEEEeCCCCceEEEecc-CCC-eEEEEEcCCCC-EEEEEecCCCeEEEEEeCCcee
Q psy3337 228 TLANPLAQNKRGISYVQQWDVDSGRLRLAREM-KES-LSALAVRDDGR-FVAVGTMFTGSVFVYIAFSLQM 295 (297)
Q Consensus 228 ~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~-~~~-v~~~~~s~dg~-~l~~~~~~dg~i~vwd~~~~~~ 295 (297)
+. +.|+.|++||+++++.+..+.. |.. |.+++|+|++. +|++|+. ||.|++||+.+++.
T Consensus 264 ~~--------~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~-dg~i~vwd~~~~~~ 325 (420)
T 3vl1_A 264 AG--------HVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYE-NGMLAQWDLRSPEC 325 (420)
T ss_dssp EE--------ETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEET-TSEEEEEETTCTTS
T ss_pred EE--------cCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeC-CCeEEEEEcCCCcC
Confidence 84 4599999999999887777654 444 99999999999 9999999 99999999988753
No 18
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=8.5e-32 Score=226.93 Aligned_cols=184 Identities=15% Similarity=0.251 Sum_probs=162.7
Q ss_pred CCCCCCCceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCeeeEEeccccCCeeEEEEc
Q psy3337 90 NSIDSKEKNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFS 168 (297)
Q Consensus 90 ~~~~~~d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s 168 (297)
..+++.|++|++ ++.+++.+..+. +|...|.+++|+|++++|++|+.|++|++||++ ++.+..+.+|...|.++.|+
T Consensus 80 l~s~s~D~~v~~wd~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~~ 157 (319)
T 3frx_A 80 ALSASWDKTLRLWDVATGETYQRFV-GHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVV 157 (319)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEE-CCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEEC
T ss_pred EEEEeCCCEEEEEECCCCCeeEEEc-cCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEEEEEc
Confidence 557899999999 999999999998 999999999999999999999999999999986 56678888999999999999
Q ss_pred cC------CCEEEEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCe
Q psy3337 169 IS------GEQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISY 242 (297)
Q Consensus 169 p~------~~~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~ 242 (297)
|. +..|++++.|+.|++||+++++....+..|.. .+..++|+|++.+|++++ .|+.
T Consensus 158 ~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~----------~v~~~~~sp~g~~l~s~~--------~dg~ 219 (319)
T 3frx_A 158 PNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNS----------NINTLTASPDGTLIASAG--------KDGE 219 (319)
T ss_dssp CC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCS----------CEEEEEECTTSSEEEEEE--------TTCE
T ss_pred cCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCC----------cEEEEEEcCCCCEEEEEe--------CCCe
Confidence 85 45899999999999999999888888877642 234588999999999954 5999
Q ss_pred EEEEeCCCCceEEEeccCCCeEEEEEcCCCCEEEEEecCCCeEEEEEeCCcee
Q psy3337 243 VQQWDVDSGRLRLAREMKESLSALAVRDDGRFVAVGTMFTGSVFVYIAFSLQM 295 (297)
Q Consensus 243 i~~wd~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~~~~ 295 (297)
|++||+.+++++..+..+..|.+++|+|++.+|++++. +.+++|++.....
T Consensus 220 i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~la~~~~--~~i~v~~~~~~~~ 270 (319)
T 3frx_A 220 IMLWNLAAKKAMYTLSAQDEVFSLAFSPNRYWLAAATA--TGIKVFSLDPQYL 270 (319)
T ss_dssp EEEEETTTTEEEEEEECCSCEEEEEECSSSSEEEEEET--TEEEEEEETTEEE
T ss_pred EEEEECCCCcEEEEecCCCcEEEEEEcCCCCEEEEEcC--CCcEEEEeCcCee
Confidence 99999999999999988888999999999999999884 5699999876543
No 19
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=6e-32 Score=234.28 Aligned_cols=193 Identities=16% Similarity=0.192 Sum_probs=159.5
Q ss_pred CCCCCCCceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCeeeEEeccccCCeeEEEEc
Q psy3337 90 NSIDSKEKNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFS 168 (297)
Q Consensus 90 ~~~~~~d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s 168 (297)
..+++.|++|++ ++.+++.+..+. +|...|++++|+|++++|++++.|++|++||+++++....+. +...+.+++|+
T Consensus 138 l~s~~~d~~i~iwd~~~~~~~~~~~-~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~~ 215 (393)
T 1erj_A 138 LATGAEDRLIRIWDIENRKIVMILQ-GHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS-IEDGVTTVAVS 215 (393)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEEC-CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEEC
T ss_pred EEEEcCCCeEEEEECCCCcEEEEEc-cCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE-cCCCcEEEEEE
Confidence 457889999999 999998888888 999999999999999999999999999999999998877776 56679999999
Q ss_pred c-CCCEEEEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEe
Q psy3337 169 I-SGEQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWD 247 (297)
Q Consensus 169 p-~~~~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd 247 (297)
| ++++|++++.|+.|++||++++..+..+...... .......+..++|+|++.+|+++ +.|+.|++||
T Consensus 216 ~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~---~~~h~~~v~~v~~~~~g~~l~s~--------s~d~~v~~wd 284 (393)
T 1erj_A 216 PGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENES---GTGHKDSVYSVVFTRDGQSVVSG--------SLDRSVKLWN 284 (393)
T ss_dssp STTCCEEEEEETTSCEEEEETTTCCEEEEEC---------CCCSSCEEEEEECTTSSEEEEE--------ETTSEEEEEE
T ss_pred CCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccC---CCCCCCCEEEEEECCCCCEEEEE--------eCCCEEEEEE
Confidence 9 8999999999999999999998877766321100 00011234568899999999984 4599999999
Q ss_pred CCCC------------ceEEEeccCCC-eEEEEEcCCCCEEEEEecCCCeEEEEEeCCceec
Q psy3337 248 VDSG------------RLRLAREMKES-LSALAVRDDGRFVAVGTMFTGSVFVYIAFSLQMC 296 (297)
Q Consensus 248 ~~~~------------~~~~~~~~~~~-v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~~~~~ 296 (297)
+++. .+...+.+|.. |.+++|+|++.+|++|+. |+.|++||+.+++++
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~-D~~v~iwd~~~~~~~ 345 (393)
T 1erj_A 285 LQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSK-DRGVLFWDKKSGNPL 345 (393)
T ss_dssp C---------------CEEEEEECCSSCEEEEEECGGGCEEEEEET-TSEEEEEETTTCCEE
T ss_pred CCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeC-CCeEEEEECCCCeEE
Confidence 9753 34556777776 999999999999999999 999999999988754
No 20
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=7.7e-32 Score=224.90 Aligned_cols=239 Identities=12% Similarity=0.093 Sum_probs=175.4
Q ss_pred cceeeeCCCccEEEeccCCceeeEEEeeEEeeccccccccCCCCchhhhhhcccccchhhhhccCCCcccccccCCCCCC
Q psy3337 2 NCDVHSNGKNIYVVAGQENSNQLYKITAEFTQMNGVVKSKESNNTADTIVRKRKEKDKENAKQKGGKKEKSNEKGKNKKD 81 (297)
Q Consensus 2 ~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (297)
+|+.|+++|++||+|+.|+.++||++........ ....++......-. .
T Consensus 13 ~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~----------~~l~gH~~~V~~v~---------------------~ 61 (297)
T 2pm7_B 13 HDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLI----------DTLTGHEGPVWRVD---------------------W 61 (297)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCC----------EEECCCSSCEEEEE---------------------E
T ss_pred EEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEE----------EEEccccCCeEEEE---------------------e
Confidence 4667999999999999999999999853210000 00000000000000 0
Q ss_pred CCCCCCCcCCCCCCCceEEE-EeeCCC--eEEEEecCCCCcEEEEEEecC--CCEEEEEcCCCcEEEEeCCCCe--eeEE
Q psy3337 82 KIEDPPILNSIDSKEKNLRF-GFKTFD--SVQTVFAGSESLQRVVRLSRN--GDLMVTGGTDGHLRLWSFPKMK--PLLH 154 (297)
Q Consensus 82 ~~~~~~~l~~~~~~d~~i~~-~~~~~~--~~~~~~~~h~~~v~~~~~s~~--g~~l~s~~~d~~i~iwd~~~~~--~~~~ 154 (297)
......-+..+++.|++|++ ++.+++ .+..+. +|...|.+++|+|+ +.+|++++.|+.|++||++++. ....
T Consensus 62 s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~-~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~ 140 (297)
T 2pm7_B 62 AHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHA-VHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPII 140 (297)
T ss_dssp CCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEEC-CCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEE
T ss_pred cCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEee-cCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeee
Confidence 00000112568899999999 888774 445555 89999999999997 8999999999999999998753 2456
Q ss_pred eccccCCeeEEEEccC-------------CCEEEEEeCCCcEEEEEcCCCc----eeeeeeccCCCCceEEEEeeeeeee
Q psy3337 155 IEAHSKEIDDVDFSIS-------------GEQIVSIAKDGKAFVWNSKNGS----LSKELKWNTPDNIKYLFKRCRYGLV 217 (297)
Q Consensus 155 ~~~~~~~v~~~~~sp~-------------~~~l~s~~~d~~v~lwd~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (297)
+.+|...|.+++|+|+ +++|++++.|++|++||++++. ....+.+|. ..+..+
T Consensus 141 ~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~----------~~V~~v 210 (297)
T 2pm7_B 141 IDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHS----------DWVRDV 210 (297)
T ss_dssp EECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCS----------SCEEEE
T ss_pred eecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCC----------CceEEE
Confidence 7889999999999997 5799999999999999998765 445565554 234458
Q ss_pred eeCCCC---eEEEEeccCcccccCCCCeEEEEeCCCCc---eEEEe--ccCCC-eEEEEEcCCCCEEEEEecCCCeEEEE
Q psy3337 218 EDSPKR---SRLFTLANPLAQNKRGISYVQQWDVDSGR---LRLAR--EMKES-LSALAVRDDGRFVAVGTMFTGSVFVY 288 (297)
Q Consensus 218 ~~s~~~---~~l~~~~~~~~~~g~~d~~i~~wd~~~~~---~~~~~--~~~~~-v~~~~~s~dg~~l~~~~~~dg~i~vw 288 (297)
+|+|++ .+|+++ +.|++|++||+.... ....+ ..+.. |.+++|+|+|++|++++. |+.|+||
T Consensus 211 ~~sp~~~~~~~las~--------s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~-D~~v~lw 281 (297)
T 2pm7_B 211 AWSPTVLLRSYMASV--------SQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGG-DNKVTLW 281 (297)
T ss_dssp EECCCCSSSEEEEEE--------ETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEET-TSCEEEE
T ss_pred EECCCCCCceEEEEE--------ECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcC-CCcEEEE
Confidence 899985 788884 459999999998743 22233 33444 999999999999999999 9999999
Q ss_pred EeC
Q psy3337 289 IAF 291 (297)
Q Consensus 289 d~~ 291 (297)
+..
T Consensus 282 ~~~ 284 (297)
T 2pm7_B 282 KEN 284 (297)
T ss_dssp EEC
T ss_pred EEC
Confidence 986
No 21
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=3.1e-32 Score=248.98 Aligned_cols=240 Identities=13% Similarity=0.181 Sum_probs=179.6
Q ss_pred cceeeeCCCccEEEeccCCceeeEEEeeEEeeccccccccCCCCchhhhhhc-ccccchhhhhccCCCcccccccCCCCC
Q psy3337 2 NCDVHSNGKNIYVVAGQENSNQLYKITAEFTQMNGVVKSKESNNTADTIVRK-RKEKDKENAKQKGGKKEKSNEKGKNKK 80 (297)
Q Consensus 2 ~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (297)
+|+.|+++|++||+|+.|+.++||++........... .++.. -....
T Consensus 63 ~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~----------~~~~~~v~~v~---------------------- 110 (611)
T 1nr0_A 63 TVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTI----------PVFSGPVKDIS---------------------- 110 (611)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEE----------ECSSSCEEEEE----------------------
T ss_pred EEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEee----------cccCCceEEEE----------------------
Confidence 5677999999999999999999999842110000000 00000 00000
Q ss_pred CCCCCCCCcCCCCC-C--CceEEEEeeCCCeEEEEecCCCCcEEEEEEecCCC-EEEEEcCCCcEEEEeCCCCeeeEEec
Q psy3337 81 DKIEDPPILNSIDS-K--EKNLRFGFKTFDSVQTVFAGSESLQRVVRLSRNGD-LMVTGGTDGHLRLWSFPKMKPLLHIE 156 (297)
Q Consensus 81 ~~~~~~~~l~~~~~-~--d~~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~~g~-~l~s~~~d~~i~iwd~~~~~~~~~~~ 156 (297)
...+...+...+. . ++.|++ ..+++....+. +|...|++++|+|++. .|++|+.|++|++||..+++.+..+.
T Consensus 111 -fs~dg~~l~~~~~~~~~~~~v~~-wd~~~~~~~l~-gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~ 187 (611)
T 1nr0_A 111 -WDSESKRIAAVGEGRERFGHVFL-FDTGTSNGNLT-GQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFG 187 (611)
T ss_dssp -ECTTSCEEEEEECCSSCSEEEEE-TTTCCBCBCCC-CCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEEC
T ss_pred -ECCCCCEEEEEECCCCceeEEEE-eeCCCCcceec-CCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeec
Confidence 0001111122221 1 245666 22566667777 9999999999999986 69999999999999999999999999
Q ss_pred cccCCeeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeee-------ccCCCCceEEEEeeeeeeeeeCCCCeEEEEe
Q psy3337 157 AHSKEIDDVDFSISGEQIVSIAKDGKAFVWNSKNGSLSKELK-------WNTPDNIKYLFKRCRYGLVEDSPKRSRLFTL 229 (297)
Q Consensus 157 ~~~~~v~~~~~sp~~~~l~s~~~d~~v~lwd~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~ 229 (297)
+|...|.+++|+|++++|++++.|++|++||+.+++.+..+. .|. ..+..++|+|++++|+++
T Consensus 188 ~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~----------~~V~~v~~spdg~~l~s~ 257 (611)
T 1nr0_A 188 EHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHS----------GSVFGLTWSPDGTKIASA 257 (611)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSS----------SCEEEEEECTTSSEEEEE
T ss_pred cccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccC----------CCEEEEEECCCCCEEEEE
Confidence 999999999999999999999999999999999998887773 232 234458899999999995
Q ss_pred ccCcccccCCCCeEEEEeCCCCceEEE-------------------------------------------eccCCC-eEE
Q psy3337 230 ANPLAQNKRGISYVQQWDVDSGRLRLA-------------------------------------------REMKES-LSA 265 (297)
Q Consensus 230 ~~~~~~~g~~d~~i~~wd~~~~~~~~~-------------------------------------------~~~~~~-v~~ 265 (297)
+. |++|++||+.+++++.. +.+|.. |.+
T Consensus 258 s~--------D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~ 329 (611)
T 1nr0_A 258 SA--------DKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITA 329 (611)
T ss_dssp ET--------TSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEE
T ss_pred eC--------CCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEE
Confidence 54 89999999887665433 345655 999
Q ss_pred EEEcCCCCEEEEEecCCCeEEEEEeCCcee
Q psy3337 266 LAVRDDGRFVAVGTMFTGSVFVYIAFSLQM 295 (297)
Q Consensus 266 ~~~s~dg~~l~~~~~~dg~i~vwd~~~~~~ 295 (297)
++|+|||++|++++. |++|++||+.+++.
T Consensus 330 l~~spdg~~l~s~s~-D~~v~~Wd~~~~~~ 358 (611)
T 1nr0_A 330 LSSSADGKTLFSADA-EGHINSWDISTGIS 358 (611)
T ss_dssp EEECTTSSEEEEEET-TSCEEEEETTTCCE
T ss_pred EEEeCCCCEEEEEeC-CCcEEEEECCCCce
Confidence 999999999999999 99999999988754
No 22
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=8e-32 Score=233.50 Aligned_cols=236 Identities=16% Similarity=0.154 Sum_probs=180.6
Q ss_pred cceeeeCCCccEEEeccCCceeeEEEeeEEeeccccccccCCCCchhhhhhccc-ccchhhhhccCCCcccccccCCCCC
Q psy3337 2 NCDVHSNGKNIYVVAGQENSNQLYKITAEFTQMNGVVKSKESNNTADTIVRKRK-EKDKENAKQKGGKKEKSNEKGKNKK 80 (297)
Q Consensus 2 ~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (297)
+|+.|+++|++|++|+.|+.++||++........ .+++.... ...-
T Consensus 127 ~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~------------~~~h~~~v~~~~~--------------------- 173 (393)
T 1erj_A 127 RSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMI------------LQGHEQDIYSLDY--------------------- 173 (393)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTTEEEEE------------ECCCSSCEEEEEE---------------------
T ss_pred EEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEE------------EccCCCCEEEEEE---------------------
Confidence 3566899999999999999999999865332110 00000000 0000
Q ss_pred CCCCCCCCcCCCCCCCceEEE-EeeCCCeEEEEecCCCCcEEEEEEec-CCCEEEEEcCCCcEEEEeCCCCeeeEEe---
Q psy3337 81 DKIEDPPILNSIDSKEKNLRF-GFKTFDSVQTVFAGSESLQRVVRLSR-NGDLMVTGGTDGHLRLWSFPKMKPLLHI--- 155 (297)
Q Consensus 81 ~~~~~~~~l~~~~~~d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~-~g~~l~s~~~d~~i~iwd~~~~~~~~~~--- 155 (297)
..+ .-...+++.|++|++ ++.+++....+ .+...+.+++|+| ++++|++|+.|+.|++||+++++.+..+
T Consensus 174 --~p~-~~~l~s~s~d~~v~iwd~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~ 248 (393)
T 1erj_A 174 --FPS-GDKLVSGSGDRTVRIWDLRTGQCSLTL--SIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSE 248 (393)
T ss_dssp --CTT-SSEEEEEETTSEEEEEETTTTEEEEEE--ECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC--
T ss_pred --cCC-CCEEEEecCCCcEEEEECCCCeeEEEE--EcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeeccc
Confidence 000 011457889999999 89998887776 4566799999999 8999999999999999999998877766
Q ss_pred ----ccccCCeeEEEEccCCCEEEEEeCCCcEEEEEcCCCce------------eeeeeccCCCCceEEEEeeeeeeeee
Q psy3337 156 ----EAHSKEIDDVDFSISGEQIVSIAKDGKAFVWNSKNGSL------------SKELKWNTPDNIKYLFKRCRYGLVED 219 (297)
Q Consensus 156 ----~~~~~~v~~~~~sp~~~~l~s~~~d~~v~lwd~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (297)
.+|...|.+++|+|++++|++++.|++|++||+++... ...+.+|. ..+..++|
T Consensus 249 ~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~----------~~v~~~~~ 318 (393)
T 1erj_A 249 NESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHK----------DFVLSVAT 318 (393)
T ss_dssp ----CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCS----------SCEEEEEE
T ss_pred ccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEeccc----------CcEEEEEE
Confidence 57999999999999999999999999999999976432 22232332 22445889
Q ss_pred CCCCeEEEEeccCcccccCCCCeEEEEeCCCCceEEEeccCCC-eEEEEEcC------CCCEEEEEecCCCeEEEEEeCC
Q psy3337 220 SPKRSRLFTLANPLAQNKRGISYVQQWDVDSGRLRLAREMKES-LSALAVRD------DGRFVAVGTMFTGSVFVYIAFS 292 (297)
Q Consensus 220 s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~-v~~~~~s~------dg~~l~~~~~~dg~i~vwd~~~ 292 (297)
+|++.+|++ |+.|+.|++||+.+++++..+.+|.. |.+++|++ ++.+|++|+. ||+|+||++..
T Consensus 319 ~~~~~~l~s--------gs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~-Dg~i~iW~~~~ 389 (393)
T 1erj_A 319 TQNDEYILS--------GSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSG-DCKARIWKYKK 389 (393)
T ss_dssp CGGGCEEEE--------EETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEET-TSEEEEEEEEE
T ss_pred CCCCCEEEE--------EeCCCeEEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCCCCEEEEECC-CCcEEECcccc
Confidence 999999998 45599999999999999999999877 99999886 6899999999 99999999976
Q ss_pred ce
Q psy3337 293 LQ 294 (297)
Q Consensus 293 ~~ 294 (297)
.+
T Consensus 390 ~~ 391 (393)
T 1erj_A 390 IA 391 (393)
T ss_dssp C-
T ss_pred cC
Confidence 54
No 23
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.2e-31 Score=226.76 Aligned_cols=238 Identities=12% Similarity=0.099 Sum_probs=178.7
Q ss_pred ceeeeCCCccEEEeccCCceeeEEEeeEEeeccccccccCCCCchhhhhhcc-cccchhhhhccCCCcccccccCCCCCC
Q psy3337 3 CDVHSNGKNIYVVAGQENSNQLYKITAEFTQMNGVVKSKESNNTADTIVRKR-KEKDKENAKQKGGKKEKSNEKGKNKKD 81 (297)
Q Consensus 3 ~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (297)
+..|+++|++||+||.|+.++||++........... . +++... ....-
T Consensus 21 ~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~--~-------~~h~~~v~~~~~---------------------- 69 (345)
T 3fm0_A 21 FLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVL--S-------EGHQRTVRKVAW---------------------- 69 (345)
T ss_dssp EEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEE--C-------SSCSSCEEEEEE----------------------
T ss_pred EEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeee--c-------cccCCcEEEEEE----------------------
Confidence 455899999999999999999999865421100000 0 000000 00000
Q ss_pred CCCCCCCcCCCCCCCceEEE-EeeCCC--eEEEEecCCCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCC---eeeEEe
Q psy3337 82 KIEDPPILNSIDSKEKNLRF-GFKTFD--SVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKM---KPLLHI 155 (297)
Q Consensus 82 ~~~~~~~l~~~~~~d~~i~~-~~~~~~--~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~---~~~~~~ 155 (297)
.+..-+..+++.|+++++ +..++. .+..+. +|...|.+++|+|++++|++|+.|+.|++||+.++ ..+..+
T Consensus 70 --sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~-~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~ 146 (345)
T 3fm0_A 70 --SPCGNYLASASFDATTCIWKKNQDDFECVTTLE-GHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVL 146 (345)
T ss_dssp --CTTSSEEEEEETTSCEEEEEECCC-EEEEEEEC-CCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEE
T ss_pred --CCCCCEEEEEECCCcEEEEEccCCCeEEEEEcc-CCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEe
Confidence 000112557889999999 776664 455666 99999999999999999999999999999999765 346678
Q ss_pred ccccCCeeEEEEccCCCEEEEEeCCCcEEEEEcCCCce--eeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCc
Q psy3337 156 EAHSKEIDDVDFSISGEQIVSIAKDGKAFVWNSKNGSL--SKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPL 233 (297)
Q Consensus 156 ~~~~~~v~~~~~sp~~~~l~s~~~d~~v~lwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~ 233 (297)
.+|...|.+++|+|++.+|++++.|++|++||++++.. ...+..|. ..+..++|+|++.+|++++
T Consensus 147 ~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~----------~~v~~l~~sp~g~~l~s~s--- 213 (345)
T 3fm0_A 147 NSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHE----------STVWSLAFDPSGQRLASCS--- 213 (345)
T ss_dssp CCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCS----------SCEEEEEECTTSSEEEEEE---
T ss_pred cCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCC----------CceEEEEECCCCCEEEEEe---
Confidence 89999999999999999999999999999999987753 34555554 2244588999999999954
Q ss_pred ccccCCCCeEEEEeCCC---------------CceEEEecc-CCC-eEEEEEcCCCCEEEEEecCCCeEEEEEeCCc
Q psy3337 234 AQNKRGISYVQQWDVDS---------------GRLRLAREM-KES-LSALAVRDDGRFVAVGTMFTGSVFVYIAFSL 293 (297)
Q Consensus 234 ~~~g~~d~~i~~wd~~~---------------~~~~~~~~~-~~~-v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~~ 293 (297)
.|+.|++||... .+++..+.+ |.. |.+++|+|++..|++++. |+.|++|+....
T Consensus 214 -----~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~-d~~i~vw~~~~~ 284 (345)
T 3fm0_A 214 -----DDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACG-DDAIRVFQEDPN 284 (345)
T ss_dssp -----TTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEET-TSCEEEEEECTT
T ss_pred -----CCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeC-CCeEEEEEeCCC
Confidence 599999999632 133445554 555 999999999999999999 999999998654
No 24
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.2e-31 Score=226.85 Aligned_cols=251 Identities=12% Similarity=0.073 Sum_probs=175.0
Q ss_pred cceeeeCCCccEEEeccCCceeeEEEeeEEeeccccccccCCCCchhhhhhccc-ccchhhhhccCCCcccccccCCCCC
Q psy3337 2 NCDVHSNGKNIYVVAGQENSNQLYKITAEFTQMNGVVKSKESNNTADTIVRKRK-EKDKENAKQKGGKKEKSNEKGKNKK 80 (297)
Q Consensus 2 ~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (297)
+|..|++++++|++|+.|+.++||++........... +++...- ...-
T Consensus 65 ~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~----------~~h~~~v~~v~~--------------------- 113 (345)
T 3fm0_A 65 RKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTL----------EGHENEVKSVAW--------------------- 113 (345)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEE----------CCCSSCEEEEEE---------------------
T ss_pred EEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEc----------cCCCCCceEEEE---------------------
Confidence 4566899999999999999999999865421100000 0000000 0000
Q ss_pred CCCCCCCCcCCCCCCCceEEE-EeeCCCe---EEEEecCCCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCe--eeEE
Q psy3337 81 DKIEDPPILNSIDSKEKNLRF-GFKTFDS---VQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMK--PLLH 154 (297)
Q Consensus 81 ~~~~~~~~l~~~~~~d~~i~~-~~~~~~~---~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~--~~~~ 154 (297)
.+..-+..+++.|++|++ ++.++.. +..+. +|...|.+++|+|++++|++|+.|+.|++||+++++ +...
T Consensus 114 ---sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~-~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~ 189 (345)
T 3fm0_A 114 ---APSGNLLATCSRDKSVWVWEVDEEDEYECVSVLN-SHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCAT 189 (345)
T ss_dssp ---CTTSSEEEEEETTSCEEEEEECTTSCEEEEEEEC-CCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEE
T ss_pred ---eCCCCEEEEEECCCeEEEEECCCCCCeEEEEEec-CcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEE
Confidence 000112557889999999 8877643 34455 899999999999999999999999999999998775 4578
Q ss_pred eccccCCeeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeeccC--CCCceEE----EEeeeeeeeeeCCCCeEEEE
Q psy3337 155 IEAHSKEIDDVDFSISGEQIVSIAKDGKAFVWNSKNGSLSKELKWNT--PDNIKYL----FKRCRYGLVEDSPKRSRLFT 228 (297)
Q Consensus 155 ~~~~~~~v~~~~~sp~~~~l~s~~~d~~v~lwd~~~~~~~~~~~~~~--~~~~~~~----~~~~~~~~~~~s~~~~~l~~ 228 (297)
+.+|...|.+++|+|++++|++++.|++|++||.........+.... +...... .....+..++|+|++..|++
T Consensus 190 ~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s 269 (345)
T 3fm0_A 190 LEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALAT 269 (345)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEE
T ss_pred ecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEE
Confidence 89999999999999999999999999999999974322111100000 0000000 01123556899999999998
Q ss_pred eccCcccccCCCCeEEEEeCCCCc---------eEEEeccCCC-eEEEEEcCCC-CEEEEEecCCCeEEEEEeCCceec
Q psy3337 229 LANPLAQNKRGISYVQQWDVDSGR---------LRLAREMKES-LSALAVRDDG-RFVAVGTMFTGSVFVYIAFSLQMC 296 (297)
Q Consensus 229 ~~~~~~~~g~~d~~i~~wd~~~~~---------~~~~~~~~~~-v~~~~~s~dg-~~l~~~~~~dg~i~vwd~~~~~~~ 296 (297)
++. |+.|++|+...+. ......+|.. |.+++|+|++ .+|++|+. ||.|++|++.+.+++
T Consensus 270 ~~~--------d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~-Dg~v~~W~~~~~~~~ 339 (345)
T 3fm0_A 270 ACG--------DDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSD-DGEVAFWKYQRPEGL 339 (345)
T ss_dssp EET--------TSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEET-TSCEEEEEECC----
T ss_pred EeC--------CCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCC-CCcEEEEEecCCCCc
Confidence 554 9999999987532 1122345666 9999999987 59999999 999999999988764
No 25
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=3.6e-32 Score=234.65 Aligned_cols=239 Identities=12% Similarity=0.134 Sum_probs=183.7
Q ss_pred cceeeeCCCccEEEeccCCceeeEEEeeEEeeccccccccCCCCchhhhhhcccccchhhhhccCCCcccccccCCCCCC
Q psy3337 2 NCDVHSNGKNIYVVAGQENSNQLYKITAEFTQMNGVVKSKESNNTADTIVRKRKEKDKENAKQKGGKKEKSNEKGKNKKD 81 (297)
Q Consensus 2 ~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (297)
+|+.|++++++|++|+.|+.++||++........... ... ....-
T Consensus 70 ~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~-h~~----------------------------------~v~~~ 114 (380)
T 3iz6_a 70 YSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKL-HCP----------------------------------WVMEC 114 (380)
T ss_dssp EEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEEC-CCT----------------------------------TCCCC
T ss_pred EEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEec-CCC----------------------------------CEEEE
Confidence 5677999999999999999999999754332110000 000 00000
Q ss_pred CCCCCCCcCCCCCCCceEEE-EeeCCC-------eEEEEecCCCCcEEEEEEecCC-CEEEEEcCCCcEEEEeCCCCeee
Q psy3337 82 KIEDPPILNSIDSKEKNLRF-GFKTFD-------SVQTVFAGSESLQRVVRLSRNG-DLMVTGGTDGHLRLWSFPKMKPL 152 (297)
Q Consensus 82 ~~~~~~~l~~~~~~d~~i~~-~~~~~~-------~~~~~~~~h~~~v~~~~~s~~g-~~l~s~~~d~~i~iwd~~~~~~~ 152 (297)
...+..-+..+++.|+.+++ ++.+.. ....+. +|.+.|.++.|+|++ ..|++|+.|++|++||+.+++.+
T Consensus 115 ~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~-gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~ 193 (380)
T 3iz6_a 115 AFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLT-GHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRI 193 (380)
T ss_dssp EECTTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCC-CCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEE
T ss_pred EECCCCCEEEEeeCCCcEEEEECCCCccccCCccceeecc-CCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEE
Confidence 00001112457889999999 765432 233455 999999999999974 67999999999999999999888
Q ss_pred EEe-----ccccCCeeEEEEcc-CCCEEEEEeCCCcEEEEEcC-CCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeE
Q psy3337 153 LHI-----EAHSKEIDDVDFSI-SGEQIVSIAKDGKAFVWNSK-NGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSR 225 (297)
Q Consensus 153 ~~~-----~~~~~~v~~~~~sp-~~~~l~s~~~d~~v~lwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 225 (297)
..+ .+|...|.+++|+| ++++|++++.|++|++||++ .+..+..+.+|.. .+..++|+|++.+
T Consensus 194 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~----------~v~~v~~~p~~~~ 263 (380)
T 3iz6_a 194 SIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEG----------DINSVKFFPDGQR 263 (380)
T ss_dssp EEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSS----------CCCEEEECTTSSE
T ss_pred EEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCC----------CeEEEEEecCCCe
Confidence 777 67899999999987 88999999999999999998 4567777776652 2445889999999
Q ss_pred EEEeccCcccccCCCCeEEEEeCCCCceEEEeccCC--------CeEEEEEcCCCCEEEEEecCCCeEEEEEeCCcee
Q psy3337 226 LFTLANPLAQNKRGISYVQQWDVDSGRLRLAREMKE--------SLSALAVRDDGRFVAVGTMFTGSVFVYIAFSLQM 295 (297)
Q Consensus 226 l~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~--------~v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~~~~ 295 (297)
|++ |+.|+.|++||+++++++..+..+. .|.+++|+|+|++|++|+. ||.|++||+.+++.
T Consensus 264 l~s--------~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~-dg~i~vwd~~~~~~ 332 (380)
T 3iz6_a 264 FGT--------GSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYS-NGDCYVWDTLLAEM 332 (380)
T ss_dssp EEE--------ECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECT-TSCEEEEETTTCCE
T ss_pred EEE--------EcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEEC-CCCEEEEECCCCce
Confidence 999 5559999999999999888775431 2899999999999999999 99999999877654
No 26
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=8.6e-31 Score=222.92 Aligned_cols=183 Identities=20% Similarity=0.258 Sum_probs=150.8
Q ss_pred CCCCCCCceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCeeeEEe---ccccCCeeEE
Q psy3337 90 NSIDSKEKNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHI---EAHSKEIDDV 165 (297)
Q Consensus 90 ~~~~~~d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~---~~~~~~v~~~ 165 (297)
..+++.|++|++ ++.+++.+..+. +|...|.+++|+|++++|++++.|+.|++||+.... ...+ ..|...|.++
T Consensus 91 l~s~s~D~~v~lwd~~~~~~~~~~~-~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~-~~~~~~~~~~~~~v~~~ 168 (343)
T 2xzm_R 91 AISSSWDKTLRLWDLRTGTTYKRFV-GHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGEC-KFSSAEKENHSDWVSCV 168 (343)
T ss_dssp EEEEETTSEEEEEETTSSCEEEEEE-CCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCE-EEECCTTTSCSSCEEEE
T ss_pred EEEEcCCCcEEEEECCCCcEEEEEc-CCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCc-eeeeecccCCCceeeee
Confidence 458889999999 999999999988 999999999999999999999999999999997433 3333 3788999999
Q ss_pred EEccCC----------CEEEEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCccc
Q psy3337 166 DFSISG----------EQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQ 235 (297)
Q Consensus 166 ~~sp~~----------~~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~ 235 (297)
+|+|++ .+|++++.|+.|++||. ..+....+..|. ..+..++|+|++++|+++
T Consensus 169 ~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~h~----------~~v~~~~~s~~g~~l~sg------ 231 (343)
T 2xzm_R 169 RYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKAHE----------SNVNHLSISPNGKYIATG------ 231 (343)
T ss_dssp EECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEECCS----------SCEEEEEECTTSSEEEEE------
T ss_pred eeccccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcCcc----------ccceEEEECCCCCEEEEE------
Confidence 999987 78999999999999994 556666666664 124458899999999994
Q ss_pred ccCCCCeEEEEeCCC-CceEEEeccCCCeEEEEEcCCCCEEEEEecCCCeEEEEEeCCcee
Q psy3337 236 NKRGISYVQQWDVDS-GRLRLAREMKESLSALAVRDDGRFVAVGTMFTGSVFVYIAFSLQM 295 (297)
Q Consensus 236 ~g~~d~~i~~wd~~~-~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~~~~ 295 (297)
+.|+.|++||+.. ......+.....|.+++|+|++.+|+++. |+.|++||+.+++.
T Consensus 232 --s~dg~v~iwd~~~~~~~~~~~~~~~~v~~v~~sp~~~~la~~~--d~~v~iw~~~~~~~ 288 (343)
T 2xzm_R 232 --GKDKKLLIWDILNLTYPQREFDAGSTINQIAFNPKLQWVAVGT--DQGVKIFNLMTQSK 288 (343)
T ss_dssp --ETTCEEEEEESSCCSSCSEEEECSSCEEEEEECSSSCEEEEEE--SSCEEEEESSSCCS
T ss_pred --cCCCeEEEEECCCCcccceeecCCCcEEEEEECCCCCEEEEEC--CCCEEEEEeCCCCC
Confidence 4599999999954 44555554445599999999999887665 88899999987653
No 27
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=3.7e-31 Score=239.75 Aligned_cols=229 Identities=19% Similarity=0.232 Sum_probs=183.8
Q ss_pred cceeeeCCCccEEEeccCCceeeEEEeeEEeeccccccccCCCCchhhhhhcccccchhhhhccCCCcccccccCCCCCC
Q psy3337 2 NCDVHSNGKNIYVVAGQENSNQLYKITAEFTQMNGVVKSKESNNTADTIVRKRKEKDKENAKQKGGKKEKSNEKGKNKKD 81 (297)
Q Consensus 2 ~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (297)
.|+.|++++++|++++.|+.+++|+.......... .. ... -+....
T Consensus 348 ~~~~~s~~g~~l~~~~~dg~v~~~~~~~~~~~~~~----~~------~~~--v~~~~~---------------------- 393 (577)
T 2ymu_A 348 WGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLT----GH------SSS--VRGVAF---------------------- 393 (577)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEETTCCEEEEEE----CC------SSC--EEEEEE----------------------
T ss_pred EEEEECCCCCEEEEEeCCCEEEEEcCCCCEEEEec----CC------CCC--eEEEEE----------------------
Confidence 35568899999999999999999985432221000 00 000 000000
Q ss_pred CCCCCCCcCCCCCCCceEEEEeeCCCeEEEEecCCCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCeeeEEeccccCC
Q psy3337 82 KIEDPPILNSIDSKEKNLRFGFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKE 161 (297)
Q Consensus 82 ~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~ 161 (297)
.+..-+..+++.|+.|+++-.+++.+..+. +|...|++++|+|++++|++++.|+.|++||. +++.+..+.+|...
T Consensus 394 --s~dg~~l~~~~~d~~v~~~~~~~~~~~~~~-~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~ 469 (577)
T 2ymu_A 394 --SPDGQTIASASDDKTVKLWNRNGQLLQTLT-GHSSSVWGVAFSPDDQTIASASDDKTVKLWNR-NGQLLQTLTGHSSS 469 (577)
T ss_dssp --CTTSSCEEEEETTSEEEEECTTCCEEEEEE-CCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TSCEEEEEECCSSC
T ss_pred --CCCCCEEEEEeCCCEEEEEeCCCCEEEEec-CCCCCeEEEEECCCCCEEEEEcCCCEEEEEEC-CCCEEEEEcCCCCC
Confidence 000111456788999999556788888888 99999999999999999999999999999996 56778889999999
Q ss_pred eeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCC
Q psy3337 162 IDDVDFSISGEQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGIS 241 (297)
Q Consensus 162 v~~~~~sp~~~~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~ 241 (297)
|.+++|+|++++|++++.|++|++||. +++.+..+..|.. .+..++|+|++++|++++ .|+
T Consensus 470 v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~----------~v~~l~~s~dg~~l~s~~--------~dg 530 (577)
T 2ymu_A 470 VRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSS----------SVRGVAFSPDGQTIASAS--------DDK 530 (577)
T ss_dssp EEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEECCSS----------CEEEEEECTTSSCEEEEE--------TTS
T ss_pred EEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCC----------CEEEEEEcCCCCEEEEEE--------CcC
Confidence 999999999999999999999999995 6788888877752 244588999999999854 499
Q ss_pred eEEEEeCCCCceEEEeccCCC-eEEEEEcCCCCEEEEEecCCCeEEEEE
Q psy3337 242 YVQQWDVDSGRLRLAREMKES-LSALAVRDDGRFVAVGTMFTGSVFVYI 289 (297)
Q Consensus 242 ~i~~wd~~~~~~~~~~~~~~~-v~~~~~s~dg~~l~~~~~~dg~i~vwd 289 (297)
.|++||. +++++..+.+|.. |++++|+|||++|++++. |+.|++||
T Consensus 531 ~v~lwd~-~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~-D~~i~~Wd 577 (577)
T 2ymu_A 531 TVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASS-DKTVKLWN 577 (577)
T ss_dssp EEEEECT-TSCEEEEEECCSSCEEEEEECTTSSCEEEEET-TSCEEEEC
T ss_pred EEEEEeC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeC-CCEEEEeC
Confidence 9999996 5888899999877 999999999999999999 99999997
No 28
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=7.6e-31 Score=221.94 Aligned_cols=238 Identities=18% Similarity=0.191 Sum_probs=180.6
Q ss_pred cceeeeCCCccEEEeccCCceeeEEEeeEEeeccccccccCCCCchhhhhhcccccchhhhhccCCCcccccccCCCCCC
Q psy3337 2 NCDVHSNGKNIYVVAGQENSNQLYKITAEFTQMNGVVKSKESNNTADTIVRKRKEKDKENAKQKGGKKEKSNEKGKNKKD 81 (297)
Q Consensus 2 ~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (297)
+|..|++++++|++++.|+.+++|+................ ....
T Consensus 90 ~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~-----------~~~~------------------------ 134 (340)
T 4aow_A 90 SDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKD-----------VLSV------------------------ 134 (340)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSC-----------EEEE------------------------
T ss_pred EEEEECCCCCEEEEEcccccceEEeecccceeeeecCCCCc-----------eeEE------------------------
Confidence 45668999999999999999999988654432100000000 0000
Q ss_pred CCCCCCCcCCCCCCCceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCC--CEEEEEcCCCcEEEEeCCCCeeeEEeccc
Q psy3337 82 KIEDPPILNSIDSKEKNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNG--DLMVTGGTDGHLRLWSFPKMKPLLHIEAH 158 (297)
Q Consensus 82 ~~~~~~~l~~~~~~d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g--~~l~s~~~d~~i~iwd~~~~~~~~~~~~~ 158 (297)
......-...+++.|+.+++ +............+|...+.+++|++++ .++++++.|+.|++||+++++.+..+.+|
T Consensus 135 ~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h 214 (340)
T 4aow_A 135 AFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGH 214 (340)
T ss_dssp EECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCC
T ss_pred EEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCC
Confidence 00000011457788999999 6655444333335899999999999875 57889999999999999999999999999
Q ss_pred cCCeeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccC
Q psy3337 159 SKEIDDVDFSISGEQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKR 238 (297)
Q Consensus 159 ~~~v~~~~~sp~~~~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~ 238 (297)
...|++++|+|++++|++++.|+.|++||+++.+.+..+..+. .+..+.|+|++..++. +
T Consensus 215 ~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~-----------~v~~~~~~~~~~~~~~-~-------- 274 (340)
T 4aow_A 215 TGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGD-----------IINALCFSPNRYWLCA-A-------- 274 (340)
T ss_dssp SSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSS-----------CEEEEEECSSSSEEEE-E--------
T ss_pred CCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCc-----------eEEeeecCCCCceeec-c--------
Confidence 9999999999999999999999999999999998888776553 1234778998865543 2
Q ss_pred CCCeEEEEeCCCCceEEEec---------cCCC-eEEEEEcCCCCEEEEEecCCCeEEEEEeCCcee
Q psy3337 239 GISYVQQWDVDSGRLRLARE---------MKES-LSALAVRDDGRFVAVGTMFTGSVFVYIAFSLQM 295 (297)
Q Consensus 239 ~d~~i~~wd~~~~~~~~~~~---------~~~~-v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~~~~ 295 (297)
.|+.|++||++++..+..+. .|.. |.+++|+|||++|++|+. ||.|+|||+.+|++
T Consensus 275 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~-Dg~v~iW~~~tGtr 340 (340)
T 4aow_A 275 TGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYT-DNLVRVWQVTIGTR 340 (340)
T ss_dssp ETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEET-TSCEEEEEEEC---
T ss_pred CCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeC-CCEEEEEeCCCcCC
Confidence 38999999999887766554 3444 999999999999999999 99999999999864
No 29
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.6e-31 Score=221.52 Aligned_cols=183 Identities=16% Similarity=0.168 Sum_probs=145.1
Q ss_pred CCCCCCCceEEE-EeeC-------CCeEEEEecCCCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCC----CeeeEEecc
Q psy3337 90 NSIDSKEKNLRF-GFKT-------FDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPK----MKPLLHIEA 157 (297)
Q Consensus 90 ~~~~~~d~~i~~-~~~~-------~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~----~~~~~~~~~ 157 (297)
..+++.|++|++ +... .+.+..+. +|...|.+++|+|++++|++|+.|++|++||+.. .+++..+.+
T Consensus 73 las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~-~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~ 151 (330)
T 2hes_X 73 LAAGSFDSTVSIWAKEESADRTFEMDLLAIIE-GHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQE 151 (330)
T ss_dssp EEEEETTSCEEEEEC-------CCCEEEEEEC-----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECC
T ss_pred EEEEeCCCcEEEEEcccCcCccccceeEEEEc-CCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEecc
Confidence 557889999999 6642 34455666 9999999999999999999999999999999943 256778899
Q ss_pred ccCCeeEEEEccCCCEEEEEeCCCcEEEEEcCCC--ceeeeeeccCCCCceEEEEeeeeeeeeeCCC--CeEEEEeccCc
Q psy3337 158 HSKEIDDVDFSISGEQIVSIAKDGKAFVWNSKNG--SLSKELKWNTPDNIKYLFKRCRYGLVEDSPK--RSRLFTLANPL 233 (297)
Q Consensus 158 ~~~~v~~~~~sp~~~~l~s~~~d~~v~lwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~--~~~l~~~~~~~ 233 (297)
|...|.+++|+|++.+|++++.|++|++||+.++ +++..+.+|.. .+..++|+|+ +..|++
T Consensus 152 h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~----------~v~~~~~~~~~~~~~l~s----- 216 (330)
T 2hes_X 152 HSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEG----------TVWSSDFDKTEGVFRLCS----- 216 (330)
T ss_dssp CSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSS----------CEEEEEECCSSSSCEEEE-----
T ss_pred CCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCC----------cEEEEEecCCCCeeEEEE-----
Confidence 9999999999999999999999999999998766 56667766641 2345778998 667877
Q ss_pred ccccCCCCeEEEEeCCCC--------ceEEEecc-CCC-eEEEEEcCCCCEEEEEecCCCeEEEEEeCCc
Q psy3337 234 AQNKRGISYVQQWDVDSG--------RLRLAREM-KES-LSALAVRDDGRFVAVGTMFTGSVFVYIAFSL 293 (297)
Q Consensus 234 ~~~g~~d~~i~~wd~~~~--------~~~~~~~~-~~~-v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~~ 293 (297)
|+.|+.|++||+..+ .+...+.. |.. |.+++|++++ +|++++. ||.|++||+.++
T Consensus 217 ---~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~-dg~v~iw~~~~~ 281 (330)
T 2hes_X 217 ---GSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGA-DGVLAVYEEVDG 281 (330)
T ss_dssp ---EETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEET-TSCEEEEEEETT
T ss_pred ---EeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC-EEEEEeC-CCEEEEEEcCCC
Confidence 455999999998764 34455554 555 9999999765 8899999 999999998776
No 30
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=1.1e-31 Score=226.03 Aligned_cols=239 Identities=11% Similarity=0.016 Sum_probs=174.7
Q ss_pred cceeeeCCCccEEEeccCCceeeEEEeeEEeeccccccccCCCCchhhhhhcccccchhhhhccCCCcccccccCCCCCC
Q psy3337 2 NCDVHSNGKNIYVVAGQENSNQLYKITAEFTQMNGVVKSKESNNTADTIVRKRKEKDKENAKQKGGKKEKSNEKGKNKKD 81 (297)
Q Consensus 2 ~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (297)
+|+.|+++|++|++|+.|+.++||++.......... .+++........ .
T Consensus 17 ~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~----------l~gH~~~V~~v~---------------------~ 65 (316)
T 3bg1_A 17 HDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIAD----------LRGHEGPVWQVA---------------------W 65 (316)
T ss_dssp EEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEE----------EECCSSCEEEEE---------------------E
T ss_pred EEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEE----------EcCCCccEEEEE---------------------e
Confidence 567789999999999999999999997532110000 000000000000 0
Q ss_pred CCCCCCCcCCCCCCCceEEE-EeeCCC--eEEEEecCCCCcEEEEEEecC--CCEEEEEcCCCcEEEEeCCCCe---eeE
Q psy3337 82 KIEDPPILNSIDSKEKNLRF-GFKTFD--SVQTVFAGSESLQRVVRLSRN--GDLMVTGGTDGHLRLWSFPKMK---PLL 153 (297)
Q Consensus 82 ~~~~~~~l~~~~~~d~~i~~-~~~~~~--~~~~~~~~h~~~v~~~~~s~~--g~~l~s~~~d~~i~iwd~~~~~---~~~ 153 (297)
......-+..+++.|++|++ ++.+++ ....+. +|...|.+++|+|+ +.+|++|+.|+.|++||++.+. ...
T Consensus 66 ~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~-~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~ 144 (316)
T 3bg1_A 66 AHPMYGNILASCSYDRKVIIWREENGTWEKSHEHA-GHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKK 144 (316)
T ss_dssp CCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEEC-CCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECC
T ss_pred CCCCCCCEEEEEECCCEEEEEECCCCcceEEEEcc-CCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceee
Confidence 00000112568899999999 787764 455565 89999999999998 7899999999999999998653 245
Q ss_pred EeccccCCeeEEEEccC-----------------CCEEEEEeCCCcEEEEEcCCC---ceeeeeeccCCCCceEEEEeee
Q psy3337 154 HIEAHSKEIDDVDFSIS-----------------GEQIVSIAKDGKAFVWNSKNG---SLSKELKWNTPDNIKYLFKRCR 213 (297)
Q Consensus 154 ~~~~~~~~v~~~~~sp~-----------------~~~l~s~~~d~~v~lwd~~~~---~~~~~~~~~~~~~~~~~~~~~~ 213 (297)
.+.+|...|.+++|+|+ +.+|++++.|++|++||++.. +.+..+..|. ..
T Consensus 145 ~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~----------~~ 214 (316)
T 3bg1_A 145 INNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHS----------DW 214 (316)
T ss_dssp BTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCS----------SC
T ss_pred eeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCC----------Cc
Confidence 66789999999999997 468999999999999999755 3555666654 12
Q ss_pred eeeeeeCCCC----eEEEEeccCcccccCCCCeEEEEeCCCC---c-eEEEeccCCC-eEEEEEcCCCCEEEEEecCCCe
Q psy3337 214 YGLVEDSPKR----SRLFTLANPLAQNKRGISYVQQWDVDSG---R-LRLAREMKES-LSALAVRDDGRFVAVGTMFTGS 284 (297)
Q Consensus 214 ~~~~~~s~~~----~~l~~~~~~~~~~g~~d~~i~~wd~~~~---~-~~~~~~~~~~-v~~~~~s~dg~~l~~~~~~dg~ 284 (297)
+..++|+|++ .+|+++ +.|++|++||+.+. + ....+..|.. |.+++|+|+|++|++++. |+.
T Consensus 215 V~~v~~sp~~~~~~~~las~--------s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~-D~~ 285 (316)
T 3bg1_A 215 VRDVAWAPSIGLPTSTIASC--------SQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGG-DNK 285 (316)
T ss_dssp EEEEECCCCSSCSCCEEEEE--------ETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEES-SSC
T ss_pred eEEEEecCCCCCCCceEEEE--------cCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcC-CCe
Confidence 4458899986 778884 45999999999762 1 1223344544 999999999999999999 999
Q ss_pred EEEEEeC
Q psy3337 285 VFVYIAF 291 (297)
Q Consensus 285 i~vwd~~ 291 (297)
|++|+..
T Consensus 286 v~lw~~~ 292 (316)
T 3bg1_A 286 VTLWKES 292 (316)
T ss_dssp EEEEEEC
T ss_pred EEEEEEC
Confidence 9999975
No 31
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=3.8e-30 Score=217.09 Aligned_cols=243 Identities=11% Similarity=0.097 Sum_probs=185.6
Q ss_pred CcceeeeCCCccEEEeccCCceeeEEEeeEEeeccccccccCCCCchhhhhhcccccchhhhhccCCCcccccccCCCCC
Q psy3337 1 MNCDVHSNGKNIYVVAGQENSNQLYKITAEFTQMNGVVKSKESNNTADTIVRKRKEKDKENAKQKGGKKEKSNEKGKNKK 80 (297)
Q Consensus 1 ~~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (297)
++|..|++++++|++++ |+.+++|++............... ..... -....
T Consensus 54 v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~----~~~~~--v~~~~---------------------- 104 (337)
T 1gxr_A 54 VCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCL----NRDNY--IRSCK---------------------- 104 (337)
T ss_dssp CCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECS----CTTSB--EEEEE----------------------
T ss_pred eEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeeccccc----CCCCc--EEEEE----------------------
Confidence 35667889999999888 999999998653211000000000 00000 00000
Q ss_pred CCCCCCCCcCCCCCCCceEEE-EeeCCC--eEEEEecCCCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCeeeEEecc
Q psy3337 81 DKIEDPPILNSIDSKEKNLRF-GFKTFD--SVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEA 157 (297)
Q Consensus 81 ~~~~~~~~l~~~~~~d~~i~~-~~~~~~--~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~ 157 (297)
...+ .-+..+++.|+.|++ ++.+++ ....+. +|...|.+++|+|++++|++++.|+.|++||+++++.+..+..
T Consensus 105 -~~~~-~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~ 181 (337)
T 1gxr_A 105 -LLPD-GCTLIVGGEASTLSIWDLAAPTPRIKAELT-SSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQG 181 (337)
T ss_dssp -ECTT-SSEEEEEESSSEEEEEECCCC--EEEEEEE-CSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC
T ss_pred -EcCC-CCEEEEEcCCCcEEEEECCCCCcceeeecc-cCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeec
Confidence 0000 111446778999999 888877 455555 8999999999999999999999999999999999999999999
Q ss_pred ccCCeeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCccccc
Q psy3337 158 HSKEIDDVDFSISGEQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNK 237 (297)
Q Consensus 158 ~~~~v~~~~~sp~~~~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g 237 (297)
|...|.+++|+|++++|++++.|+.|++||+++++.+..+.... .+..++|+|++.++++..
T Consensus 182 ~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~-----------~v~~~~~s~~~~~l~~~~------- 243 (337)
T 1gxr_A 182 HTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTS-----------QIFSLGYCPTGEWLAVGM------- 243 (337)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSS-----------CEEEEEECTTSSEEEEEE-------
T ss_pred ccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecCCC-----------ceEEEEECCCCCEEEEEc-------
Confidence 99999999999999999999999999999999988877664322 233578999999999854
Q ss_pred CCCCeEEEEeCCCCceEEEeccCCC-eEEEEEcCCCCEEEEEecCCCeEEEEEeCCceec
Q psy3337 238 RGISYVQQWDVDSGRLRLAREMKES-LSALAVRDDGRFVAVGTMFTGSVFVYIAFSLQMC 296 (297)
Q Consensus 238 ~~d~~i~~wd~~~~~~~~~~~~~~~-v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~~~~~ 296 (297)
.++.|++||+.+++... +..|.. |.+++|+|++++|++++. ||.|++||+.+++.+
T Consensus 244 -~~~~i~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~~~~~~~~~~~ 300 (337)
T 1gxr_A 244 -ESSNVEVLHVNKPDKYQ-LHLHESCVLSLKFAYCGKWFVSTGK-DNLLNAWRTPYGASI 300 (337)
T ss_dssp -TTSCEEEEETTSSCEEE-ECCCSSCEEEEEECTTSSEEEEEET-TSEEEEEETTTCCEE
T ss_pred -CCCcEEEEECCCCCeEE-EcCCccceeEEEECCCCCEEEEecC-CCcEEEEECCCCeEE
Confidence 49999999999887654 444544 999999999999999999 999999999987654
No 32
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.4e-30 Score=217.98 Aligned_cols=234 Identities=12% Similarity=0.169 Sum_probs=179.8
Q ss_pred cceeeeCCCccEEEeccCCceeeEEEeeEEeeccccccccCCCCchhhhhhccc-ccchhhhhccCCCcccccccCCCCC
Q psy3337 2 NCDVHSNGKNIYVVAGQENSNQLYKITAEFTQMNGVVKSKESNNTADTIVRKRK-EKDKENAKQKGGKKEKSNEKGKNKK 80 (297)
Q Consensus 2 ~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (297)
+|+.|++++++|++|+.|+.++||++........ .+++.... ...
T Consensus 59 ~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~------------~~~h~~~v~~~~---------------------- 104 (304)
T 2ynn_A 59 RAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVD------------FEAHPDYIRSIA---------------------- 104 (304)
T ss_dssp EEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEE------------EECCSSCEEEEE----------------------
T ss_pred EEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEE------------EeCCCCcEEEEE----------------------
Confidence 4566889999999999999999999865322100 00000000 000
Q ss_pred CCCCCCCCcCCCCCCCceEEE-EeeCCCeE-EEEecCCCCcEEEEEEec-CCCEEEEEcCCCcEEEEeCCCCeeeEEec-
Q psy3337 81 DKIEDPPILNSIDSKEKNLRF-GFKTFDSV-QTVFAGSESLQRVVRLSR-NGDLMVTGGTDGHLRLWSFPKMKPLLHIE- 156 (297)
Q Consensus 81 ~~~~~~~~l~~~~~~d~~i~~-~~~~~~~~-~~~~~~h~~~v~~~~~s~-~g~~l~s~~~d~~i~iwd~~~~~~~~~~~- 156 (297)
.... .-+..+++.|++|++ ++.++... ..+. +|...|.+++|+| ++.+|++|+.|++|++||+.++.....+.
T Consensus 105 -~~~~-~~~l~sgs~D~~v~lWd~~~~~~~~~~~~-~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~ 181 (304)
T 2ynn_A 105 -VHPT-KPYVLSGSDDLTVKLWNWENNWALEQTFE-GHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTT 181 (304)
T ss_dssp -ECSS-SSEEEEEETTSCEEEEEGGGTTEEEEEEC-CCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEEC
T ss_pred -EcCC-CCEEEEECCCCeEEEEECCCCcchhhhhc-ccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceecc
Confidence 0000 012458899999999 88887554 4455 9999999999999 67899999999999999998877665554
Q ss_pred cccCCeeEEEEcc--CCCEEEEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcc
Q psy3337 157 AHSKEIDDVDFSI--SGEQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLA 234 (297)
Q Consensus 157 ~~~~~v~~~~~sp--~~~~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~ 234 (297)
.|...+..+.|+| ++.+|++++.|++|++||+++++++..+.+|.. .+..++|+|++.+|+++
T Consensus 182 ~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~----------~v~~~~~~p~~~~l~s~----- 246 (304)
T 2ynn_A 182 GQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMS----------NVSFAVFHPTLPIIISG----- 246 (304)
T ss_dssp CCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSS----------CEEEEEECSSSSEEEEE-----
T ss_pred CCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCC----------CEEEEEECCCCCEEEEE-----
Confidence 5667899999987 778999999999999999999999999988752 23347799999999984
Q ss_pred cccCCCCeEEEEeCCCCceEEEeccCCC-eEEEEEcCCCC--EEEEEecCCCeEEEEEeCC
Q psy3337 235 QNKRGISYVQQWDVDSGRLRLAREMKES-LSALAVRDDGR--FVAVGTMFTGSVFVYIAFS 292 (297)
Q Consensus 235 ~~g~~d~~i~~wd~~~~~~~~~~~~~~~-v~~~~~s~dg~--~l~~~~~~dg~i~vwd~~~ 292 (297)
+.|+.|++||+.+++++..+..+.. +.+++|+|++. ++++|+ +..+.+|++.+
T Consensus 247 ---s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~--~~g~~~~~~~~ 302 (304)
T 2ynn_A 247 ---SEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGF--DNGFTVLSLGN 302 (304)
T ss_dssp ---ETTSCEEEEETTTCCEEEEECCSSSSEEEEEECTTCGGGCEEEEE--TTEEEEEECC-
T ss_pred ---cCCCeEEEEECCCCceeeeccCCCccEEEEEECCCCCceEEEEec--CCceEEEEecc
Confidence 4599999999999999999988765 99999999875 577777 56688888765
No 33
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.98 E-value=1.1e-30 Score=226.91 Aligned_cols=239 Identities=13% Similarity=0.161 Sum_probs=185.0
Q ss_pred cceeeeCCCccEEEeccCCceeeEEEeeEEeeccccccccCCCCchhhhhhcccccchhhhhccCCCcccccccCCCCCC
Q psy3337 2 NCDVHSNGKNIYVVAGQENSNQLYKITAEFTQMNGVVKSKESNNTADTIVRKRKEKDKENAKQKGGKKEKSNEKGKNKKD 81 (297)
Q Consensus 2 ~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (297)
+|+.|++++++|++|+.|+.+++|++.......... ++...-..
T Consensus 138 ~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~------------~~~~~v~~------------------------ 181 (401)
T 4aez_A 138 ASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMA------------GHQARVGC------------------------ 181 (401)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEEC------------CCSSCEEE------------------------
T ss_pred EEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEec------------CCCCceEE------------------------
Confidence 466688999999999999999999986432211000 00000000
Q ss_pred CCCCCCCcCCCCCCCceEEE-Eee-CCCeEEEEecCCCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCeeeEEecccc
Q psy3337 82 KIEDPPILNSIDSKEKNLRF-GFK-TFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHS 159 (297)
Q Consensus 82 ~~~~~~~l~~~~~~d~~i~~-~~~-~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~ 159 (297)
....+-...+++.|+.|++ ++. .+..+..+. +|...|.+++|+|++++|++|+.|+.|++||+++++.+..+..|.
T Consensus 182 -~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~ 259 (401)
T 4aez_A 182 -LSWNRHVLSSGSRSGAIHHHDVRIANHQIGTLQ-GHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHN 259 (401)
T ss_dssp -EEEETTEEEEEETTSEEEEEETTSSSCEEEEEE-CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCS
T ss_pred -EEECCCEEEEEcCCCCEEEEecccCcceeeEEc-CCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCc
Confidence 0000112567889999999 887 455666776 999999999999999999999999999999999999999999999
Q ss_pred CCeeEEEEccCCC-EEEEEe--CCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccc
Q psy3337 160 KEIDDVDFSISGE-QIVSIA--KDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQN 236 (297)
Q Consensus 160 ~~v~~~~~sp~~~-~l~s~~--~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~ 236 (297)
..|.+++|+|++. ++++++ .|+.|++||+++++.+..+..+. .+..++|+|++.+++++.
T Consensus 260 ~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~~-----------~v~~~~~s~~~~~l~~~~------ 322 (401)
T 4aez_A 260 AAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAGS-----------QVTSLIWSPHSKEIMSTH------ 322 (401)
T ss_dssp SCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECSS-----------CEEEEEECSSSSEEEEEE------
T ss_pred ceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCCC-----------cEEEEEECCCCCeEEEEe------
Confidence 9999999999765 555654 79999999999998888775432 244588999999998854
Q ss_pred cCCCCeEEEEeCCCCceEEE--eccCCC-eEEEEEcCCCCEEEEEecCCCeEEEEEeCCceec
Q psy3337 237 KRGISYVQQWDVDSGRLRLA--REMKES-LSALAVRDDGRFVAVGTMFTGSVFVYIAFSLQMC 296 (297)
Q Consensus 237 g~~d~~i~~wd~~~~~~~~~--~~~~~~-v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~~~~~ 296 (297)
|+.|+.|++||+.+++.... +.+|.. |.+++|+|+|.+|++++. ||.|++||+.+++.+
T Consensus 323 g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~-dg~i~iw~~~~~~~~ 384 (401)
T 4aez_A 323 GFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAAS-DENLKFWRVYDGDHV 384 (401)
T ss_dssp CTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECT-TSEEEEEECCC----
T ss_pred ecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeC-CCcEEEEECCCCccc
Confidence 44699999999998665544 556666 999999999999999999 999999999988765
No 34
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.98 E-value=9.2e-31 Score=228.72 Aligned_cols=238 Identities=16% Similarity=0.187 Sum_probs=186.7
Q ss_pred cceeeeCCCccEEEeccCCceeeEEEeeEEeeccccccccCCCCchhhhhhcccccchhhhhccCCCcccccccCCCCCC
Q psy3337 2 NCDVHSNGKNIYVVAGQENSNQLYKITAEFTQMNGVVKSKESNNTADTIVRKRKEKDKENAKQKGGKKEKSNEKGKNKKD 81 (297)
Q Consensus 2 ~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (297)
+|+.|+++|++|++|+.|+.++||++....... ..+++..+...
T Consensus 151 ~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~------------~~~~h~~~v~~------------------------ 194 (420)
T 4gga_A 151 SSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLR------------NMTSHSARVGS------------------------ 194 (420)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTTEEEE------------EECCCSSCEEE------------------------
T ss_pred EEEEECCCCCEEEEEECCCeEEEEEcCCCcEEE------------EEeCCCCceEE------------------------
Confidence 577799999999999999999999986543221 00000000000
Q ss_pred CCCCCCCcCCCCCCCceEEE-EeeCCC-eEEEEecCCCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCe----eeEEe
Q psy3337 82 KIEDPPILNSIDSKEKNLRF-GFKTFD-SVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMK----PLLHI 155 (297)
Q Consensus 82 ~~~~~~~l~~~~~~d~~i~~-~~~~~~-~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~----~~~~~ 155 (297)
....+.+..+++.|+.+++ +..... .+..+. +|...+..+.|+|+++++++++.|+.|++|+..+++ .+...
T Consensus 195 -~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~-~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~ 272 (420)
T 4gga_A 195 -LSWNSYILSSGSRSGHIHHHDVRVAEHHVATLS-GHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTF 272 (420)
T ss_dssp -EEEETTEEEEEETTSEEEEEETTSSSCEEEEEE-CCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEE
T ss_pred -EeeCCCEEEEEeCCCceeEeeecccceeeEEec-ccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeee
Confidence 0011122567889999999 766544 455666 999999999999999999999999999999998764 35667
Q ss_pred ccccCCeeEEEEccCCC-EEEEE--eCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccC
Q psy3337 156 EAHSKEIDDVDFSISGE-QIVSI--AKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANP 232 (297)
Q Consensus 156 ~~~~~~v~~~~~sp~~~-~l~s~--~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~ 232 (297)
..|...|.+++|+|++. +++++ +.|++|++||+.+++.+..+..+.. +..+.|+|++..+++++
T Consensus 273 ~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~-----------v~~~~~~~~~~~lv~~s-- 339 (420)
T 4gga_A 273 TQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQ-----------VCSILWSPHYKELISGH-- 339 (420)
T ss_dssp CCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSSC-----------EEEEEEETTTTEEEEEE--
T ss_pred cccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccccc-----------eeeeeecCCCCeEEEEE--
Confidence 78999999999999654 55543 5799999999999998888766531 22366899999888754
Q ss_pred cccccCCCCeEEEEeCCCCceEEEeccCCC-eEEEEEcCCCCEEEEEecCCCeEEEEEeCCcee
Q psy3337 233 LAQNKRGISYVQQWDVDSGRLRLAREMKES-LSALAVRDDGRFVAVGTMFTGSVFVYIAFSLQM 295 (297)
Q Consensus 233 ~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~-v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~~~~ 295 (297)
|..|+.|++||+.+++++..+.+|.. |.+++|+|||.+|++|+. |++|+|||+....+
T Consensus 340 ----g~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~-D~tvriWdv~~~~~ 398 (420)
T 4gga_A 340 ----GFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAA-DETLRLWRCFELDP 398 (420)
T ss_dssp ----CTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEET-TTEEEEECCSCSSC
T ss_pred ----ecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEec-CCeEEEEECCCCCc
Confidence 55799999999999999999999987 999999999999999999 99999999976543
No 35
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.98 E-value=3e-30 Score=233.75 Aligned_cols=233 Identities=20% Similarity=0.231 Sum_probs=184.8
Q ss_pred ceeeeCCCccEEEeccCCceeeEEEeeEEeeccccccccCCCCchhhhhhcccccchhhhhccCCCcccccccCCCCCCC
Q psy3337 3 CDVHSNGKNIYVVAGQENSNQLYKITAEFTQMNGVVKSKESNNTADTIVRKRKEKDKENAKQKGGKKEKSNEKGKNKKDK 82 (297)
Q Consensus 3 ~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (297)
++.|+++++.|++++.|+.+++|++........ ... ... -.....
T Consensus 308 ~~~~~~~~~~l~t~~~d~~i~~w~~~~~~~~~~----~~~------~~~--v~~~~~----------------------- 352 (577)
T 2ymu_A 308 GVAFSPDGQTIASASDDKTVKLWNRNGQHLQTL----TGH------SSS--VWGVAF----------------------- 352 (577)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTSCEEEEE----CCC------SSC--EEEEEE-----------------------
T ss_pred EEEECCCCCEEEEEeCCCeEEEEeCCCCeeEEE----eCC------CCC--EEEEEE-----------------------
Confidence 456889999999999999999998754322110 000 000 000000
Q ss_pred CCCCCCcCCCCCCCceEEEEeeCCCeEEEEecCCCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCeeeEEeccccCCe
Q psy3337 83 IEDPPILNSIDSKEKNLRFGFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEI 162 (297)
Q Consensus 83 ~~~~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v 162 (297)
.+..-...+++.|+.++++-.+++.+..+. +|...|.+++|+|++++|++++.|+.|++||. +++.+..+.+|...|
T Consensus 353 -s~~g~~l~~~~~dg~v~~~~~~~~~~~~~~-~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~v 429 (577)
T 2ymu_A 353 -SPDGQTIASASDDKTVKLWNRNGQLLQTLT-GHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSV 429 (577)
T ss_dssp -CTTSSEEEEEETTSEEEEEETTCCEEEEEE-CCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TCCEEEEEECCSSCE
T ss_pred -CCCCCEEEEEeCCCEEEEEcCCCCEEEEec-CCCCCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEecCCCCCe
Confidence 000111446788999999446788888888 99999999999999999999999999999995 567788899999999
Q ss_pred eEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCe
Q psy3337 163 DDVDFSISGEQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISY 242 (297)
Q Consensus 163 ~~~~~sp~~~~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~ 242 (297)
++++|+|++++|++++.|++|++||+ +++.+..+..|.. .+..++|+|++++|++++ .|+.
T Consensus 430 ~~~~~s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~----------~v~~~~~spd~~~las~~--------~d~~ 490 (577)
T 2ymu_A 430 WGVAFSPDDQTIASASDDKTVKLWNR-NGQLLQTLTGHSS----------SVRGVAFSPDGQTIASAS--------DDKT 490 (577)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEET-TSCEEEEEECCSS----------CEEEEEECTTSCEEEEEE--------TTSE
T ss_pred EEEEECCCCCEEEEEcCCCEEEEEEC-CCCEEEEEcCCCC----------CEEEEEEcCCCCEEEEEe--------CCCE
Confidence 99999999999999999999999996 5677777776642 234588999999999955 4999
Q ss_pred EEEEeCCCCceEEEeccCCC-eEEEEEcCCCCEEEEEecCCCeEEEEEeCCcee
Q psy3337 243 VQQWDVDSGRLRLAREMKES-LSALAVRDDGRFVAVGTMFTGSVFVYIAFSLQM 295 (297)
Q Consensus 243 i~~wd~~~~~~~~~~~~~~~-v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~~~~ 295 (297)
|++||. +++++..+.+|.. |++++|+|||++|++++. ||.|++||. ++++
T Consensus 491 i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~-dg~v~lwd~-~~~~ 541 (577)
T 2ymu_A 491 VKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASD-DKTVKLWNR-NGQL 541 (577)
T ss_dssp EEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEEET-TSEEEEECT-TSCE
T ss_pred EEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEEC-cCEEEEEeC-CCCE
Confidence 999995 5888889998877 999999999999999999 999999996 4444
No 36
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.98 E-value=2.6e-31 Score=233.26 Aligned_cols=256 Identities=10% Similarity=0.110 Sum_probs=179.5
Q ss_pred CcceeeeC-CCccEEEeccCCceeeEEEeeEEeeccccccccCCCCchhhhhhcccccchhhhhccCCCcccccccCCCC
Q psy3337 1 MNCDVHSN-GKNIYVVAGQENSNQLYKITAEFTQMNGVVKSKESNNTADTIVRKRKEKDKENAKQKGGKKEKSNEKGKNK 79 (297)
Q Consensus 1 ~~~~~~~~-~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (297)
++|..|++ ++++|++|+.|+.++||++............... ..-...
T Consensus 167 V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~---------~~~~~~---------------------- 215 (435)
T 4e54_B 167 ITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTIN---------IWFCSL---------------------- 215 (435)
T ss_dssp CCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCS---------CCCCCE----------------------
T ss_pred EEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCC---------ccEEEE----------------------
Confidence 45667875 6889999999999999998643321100000000 000000
Q ss_pred CCCCCCCCCcCCCCCCCceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCC-EEEEEcCCCcEEEEeCCCCeeeE---E
Q psy3337 80 KDKIEDPPILNSIDSKEKNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGD-LMVTGGTDGHLRLWSFPKMKPLL---H 154 (297)
Q Consensus 80 ~~~~~~~~~l~~~~~~d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~-~l~s~~~d~~i~iwd~~~~~~~~---~ 154 (297)
.......+..+++.|+.|++ ++ .++.+..+. +|...|++++|+|++. +|++|+.|+.|++||+++.+... .
T Consensus 216 --~~~~~~~~l~~g~~dg~i~~wd~-~~~~~~~~~-~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~ 291 (435)
T 4e54_B 216 --DVSASSRMVVTGDNVGNVILLNM-DGKELWNLR-MHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLY 291 (435)
T ss_dssp --EEETTTTEEEEECSSSBEEEEES-SSCBCCCSB-CCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSB
T ss_pred --EECCCCCEEEEEeCCCcEeeecc-CcceeEEEe-cccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEE
Confidence 00001112457889999999 65 456667777 9999999999999875 78899999999999998766433 3
Q ss_pred eccccCCeeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccC--
Q psy3337 155 IEAHSKEIDDVDFSISGEQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANP-- 232 (297)
Q Consensus 155 ~~~~~~~v~~~~~sp~~~~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~-- 232 (297)
..+|...|++++|+|++++|++++.|+.|++||+.++.....+..|...... ........|+|++..+++...+
T Consensus 292 ~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~d~ 367 (435)
T 4e54_B 292 SLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQ----HLTPIKAAWHPRYNLIVVGRYPDP 367 (435)
T ss_dssp CCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCS----SSCCCBCEECSSSSCEEEECCCCT
T ss_pred eeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccc----cceeEEEEEcCCCCEEEEEEcCCC
Confidence 4579999999999999999999999999999999998887777655421100 0011124577887777766442
Q ss_pred --cccccCCCCeEEEEeCCCCceEEEecc-CCC-eEEE-EEcCCCCEEEEEecCCCeEEEEEeCCceecC
Q psy3337 233 --LAQNKRGISYVQQWDVDSGRLRLAREM-KES-LSAL-AVRDDGRFVAVGTMFTGSVFVYIAFSLQMCR 297 (297)
Q Consensus 233 --~~~~g~~d~~i~~wd~~~~~~~~~~~~-~~~-v~~~-~~s~dg~~l~~~~~~dg~i~vwd~~~~~~~~ 297 (297)
.+..+..++.|++||..+++++..+.. |.. |.++ +|+|+|.+|++|+ |+.|+|||+++++..|
T Consensus 368 ~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~--d~~i~iW~~~~gk~rK 435 (435)
T 4e54_B 368 NFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAM--GYHILIWSQQEARTRK 435 (435)
T ss_dssp TSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEEC--SSEEEECCCC------
T ss_pred CeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEEc--CCcEEEEECCcCeeeC
Confidence 344566778999999999999888753 444 7777 6999999999876 7899999999998754
No 37
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.97 E-value=3.1e-30 Score=218.39 Aligned_cols=241 Identities=9% Similarity=0.031 Sum_probs=166.2
Q ss_pred cceeeeCCCccEEEeccCCceeeEEEeeEEeec-cccccccCCCCchhhhhhcccccchhhhhccCCCcccccccCCCCC
Q psy3337 2 NCDVHSNGKNIYVVAGQENSNQLYKITAEFTQM-NGVVKSKESNNTADTIVRKRKEKDKENAKQKGGKKEKSNEKGKNKK 80 (297)
Q Consensus 2 ~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (297)
+|+.|++++++|++|+.|+.++||++....... ..... ...+++......-
T Consensus 62 ~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~------~~~~~h~~~V~~v---------------------- 113 (330)
T 2hes_X 62 RSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLL------AIIEGHENEVKGV---------------------- 113 (330)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEE------EEEC----CEEEE----------------------
T ss_pred EEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeE------EEEcCCCCcEEEE----------------------
Confidence 456689999999999999999999985321100 00000 0000000000000
Q ss_pred CCCCCCCCcCCCCCCCceEEE-EeeC-C---CeEEEEecCCCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCC--eeeE
Q psy3337 81 DKIEDPPILNSIDSKEKNLRF-GFKT-F---DSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKM--KPLL 153 (297)
Q Consensus 81 ~~~~~~~~l~~~~~~d~~i~~-~~~~-~---~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~--~~~~ 153 (297)
.-.+..-+..+++.|++|++ ++.. + +.+..+. +|...|.+++|+|++++|++|+.|++|++||..++ +++.
T Consensus 114 -~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~-~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~ 191 (330)
T 2hes_X 114 -AWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQ-EHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVA 191 (330)
T ss_dssp -EECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEEC-CCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEE
T ss_pred -EECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEec-cCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEE
Confidence 00001112567889999999 7743 2 3455666 99999999999999999999999999999998766 6788
Q ss_pred EeccccCCeeEEEEccC--CCEEEEEeCCCcEEEEEcCCC--------ceeeeeec-cCCCCceEEEEeeeeeeeeeCCC
Q psy3337 154 HIEAHSKEIDDVDFSIS--GEQIVSIAKDGKAFVWNSKNG--------SLSKELKW-NTPDNIKYLFKRCRYGLVEDSPK 222 (297)
Q Consensus 154 ~~~~~~~~v~~~~~sp~--~~~l~s~~~d~~v~lwd~~~~--------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~s~~ 222 (297)
.+.+|...|.+++|+|+ +.+|++++.|++|++||++.+ .....+.. |. ..+..++|+++
T Consensus 192 ~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~----------~~v~~v~~s~~ 261 (330)
T 2hes_X 192 VLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHK----------RQVYNVAWGFN 261 (330)
T ss_dssp EECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCS----------SCEEEEEECTT
T ss_pred EccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccc----------cceEEEEEcCC
Confidence 89999999999999998 678999999999999998654 12222221 21 23445778876
Q ss_pred CeEEEEeccCcccccCCCCeEEEEeCCCCc--eEEE-eccCC--CeEEEEEcC--CCCEEEEEecCCCeEEEEEeCC
Q psy3337 223 RSRLFTLANPLAQNKRGISYVQQWDVDSGR--LRLA-REMKE--SLSALAVRD--DGRFVAVGTMFTGSVFVYIAFS 292 (297)
Q Consensus 223 ~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~--~~~~-~~~~~--~v~~~~~s~--dg~~l~~~~~~dg~i~vwd~~~ 292 (297)
+ .|++ ++.|+.|++||..+++ .... +..|. .|.+++|+| ++++|++|+. ||.|++||+.+
T Consensus 262 ~-~l~s--------~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~-Dg~v~~W~~~~ 328 (330)
T 2hes_X 262 G-LIAS--------VGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGD-DGIVNFWSLEK 328 (330)
T ss_dssp S-CEEE--------EETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEET-TSEEEEEEC--
T ss_pred C-EEEE--------EeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecC-CCcEEEEEecc
Confidence 6 6766 4459999999998764 3333 34454 499999999 7899999999 99999999865
No 38
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.97 E-value=2.5e-30 Score=220.09 Aligned_cols=234 Identities=15% Similarity=0.135 Sum_probs=171.1
Q ss_pred cceeeeCCCccEEEeccCCceeeEEEeeEEeeccccccccCCCCchhhhhhccc-ccchhhhhccCCCcccccccCCCCC
Q psy3337 2 NCDVHSNGKNIYVVAGQENSNQLYKITAEFTQMNGVVKSKESNNTADTIVRKRK-EKDKENAKQKGGKKEKSNEKGKNKK 80 (297)
Q Consensus 2 ~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (297)
+|..|++++.++++|+.|+.++||++........ ..++.... ...
T Consensus 80 ~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~------------~~~h~~~v~~v~---------------------- 125 (343)
T 2xzm_R 80 SDLALSQENCFAISSSWDKTLRLWDLRTGTTYKR------------FVGHQSEVYSVA---------------------- 125 (343)
T ss_dssp EEEEECSSTTEEEEEETTSEEEEEETTSSCEEEE------------EECCCSCEEEEE----------------------
T ss_pred EEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEE------------EcCCCCcEEEEE----------------------
Confidence 4566888999999999999999999865321100 00000000 000
Q ss_pred CCCCCCCCcCCCCCCCceEEE-EeeCCCeEEEEe--cCCCCcEEEEEEecCC----------CEEEEEcCCCcEEEEeCC
Q psy3337 81 DKIEDPPILNSIDSKEKNLRF-GFKTFDSVQTVF--AGSESLQRVVRLSRNG----------DLMVTGGTDGHLRLWSFP 147 (297)
Q Consensus 81 ~~~~~~~~l~~~~~~d~~i~~-~~~~~~~~~~~~--~~h~~~v~~~~~s~~g----------~~l~s~~~d~~i~iwd~~ 147 (297)
...+ .-...+++.|++|++ ++. +....... .+|...|.+++|+|++ .+|++++.|+.|++|| .
T Consensus 126 -~sp~-~~~l~s~~~d~~i~~wd~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd-~ 201 (343)
T 2xzm_R 126 -FSPD-NRQILSAGAEREIKLWNIL-GECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWN-T 201 (343)
T ss_dssp -ECSS-TTEEEEEETTSCEEEEESS-SCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEE-T
T ss_pred -ECCC-CCEEEEEcCCCEEEEEecc-CCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEc-C
Confidence 0000 011457888999999 765 34333332 3688999999999987 7899999999999999 4
Q ss_pred CCeeeEEeccccCCeeEEEEccCCCEEEEEeCCCcEEEEEcCC-CceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEE
Q psy3337 148 KMKPLLHIEAHSKEIDDVDFSISGEQIVSIAKDGKAFVWNSKN-GSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRL 226 (297)
Q Consensus 148 ~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~d~~v~lwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l 226 (297)
..+....+.+|...|.+++|+|++++|++++.|+.|++||+.. ......+... ..+..++|+|++.++
T Consensus 202 ~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~-----------~~v~~v~~sp~~~~l 270 (343)
T 2xzm_R 202 NFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQREFDAG-----------STINQIAFNPKLQWV 270 (343)
T ss_dssp TTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSEEEECS-----------SCEEEEEECSSSCEE
T ss_pred CCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcccceeecCC-----------CcEEEEEECCCCCEE
Confidence 5677788899999999999999999999999999999999953 3333333211 124568899999877
Q ss_pred EEeccCcccccCCCCeEEEEeCCCCceEE--Eec-----------cCCC-eEEEEEcCCCCEEEEEecCCCeEEEEEeCC
Q psy3337 227 FTLANPLAQNKRGISYVQQWDVDSGRLRL--ARE-----------MKES-LSALAVRDDGRFVAVGTMFTGSVFVYIAFS 292 (297)
Q Consensus 227 ~~~~~~~~~~g~~d~~i~~wd~~~~~~~~--~~~-----------~~~~-v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~ 292 (297)
++. . |+.|++||+.+++... .+. +|.. |.+++|+|+|++|++|+. ||.|++|++.+
T Consensus 271 a~~-~--------d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~-Dg~v~~w~~~~ 340 (343)
T 2xzm_R 271 AVG-T--------DQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFT-DGVIRTFSFET 340 (343)
T ss_dssp EEE-E--------SSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEET-TSEEEEEEEEE
T ss_pred EEE-C--------CCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEecC-CceEEEEEEEc
Confidence 642 2 7889999998765432 333 4444 999999999999999999 99999999987
Q ss_pred ce
Q psy3337 293 LQ 294 (297)
Q Consensus 293 ~~ 294 (297)
+.
T Consensus 341 g~ 342 (343)
T 2xzm_R 341 SA 342 (343)
T ss_dssp EE
T ss_pred cC
Confidence 64
No 39
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.97 E-value=1.7e-29 Score=211.86 Aligned_cols=187 Identities=19% Similarity=0.224 Sum_probs=167.1
Q ss_pred CCCCCCCceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCeeeEEeccccCCeeEEEEc
Q psy3337 90 NSIDSKEKNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFS 168 (297)
Q Consensus 90 ~~~~~~d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s 168 (297)
..+++.|+.|++ +..+++....+. +|...|.+++|+|++++|++|+.|+.|++||+++++.+..+.+|...|.+++|+
T Consensus 38 l~s~~~dg~i~iw~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~ 116 (312)
T 4ery_A 38 LASSSADKLIKIWGAYDGKFEKTIS-GHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFN 116 (312)
T ss_dssp EEEEETTSCEEEEETTTCCEEEEEC-CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEC
T ss_pred EEEeeCCCeEEEEeCCCcccchhhc-cCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEc
Confidence 457889999999 888898888887 999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCEEEEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeC
Q psy3337 169 ISGEQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDV 248 (297)
Q Consensus 169 p~~~~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~ 248 (297)
|++++|++++.|+.|++||+++++.+..+..|.. .+..++|+|++.++++++ .|+.|++||+
T Consensus 117 ~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~----------~v~~~~~~~~~~~l~~~~--------~d~~i~~wd~ 178 (312)
T 4ery_A 117 PQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSD----------PVSAVHFNRDGSLIVSSS--------YDGLCRIWDT 178 (312)
T ss_dssp SSSSEEEEEETTSCEEEEETTTCCEEEEECCCSS----------CEEEEEECTTSSEEEEEE--------TTSCEEEEET
T ss_pred CCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCC----------cEEEEEEcCCCCEEEEEe--------CCCcEEEEEC
Confidence 9999999999999999999999988888876641 233578999999999854 4999999999
Q ss_pred CCCceEEEecc-CCC-eEEEEEcCCCCEEEEEecCCCeEEEEEeCCceec
Q psy3337 249 DSGRLRLAREM-KES-LSALAVRDDGRFVAVGTMFTGSVFVYIAFSLQMC 296 (297)
Q Consensus 249 ~~~~~~~~~~~-~~~-v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~~~~~ 296 (297)
++++.+..+.. +.. +..++|+|++++|++++. |+.|++||+.+++.+
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-d~~i~iwd~~~~~~~ 227 (312)
T 4ery_A 179 ASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATL-DNTLKLWDYSKGKCL 227 (312)
T ss_dssp TTCCEEEEECCSSCCCEEEEEECTTSSEEEEEET-TTEEEEEETTTTEEE
T ss_pred CCCceeeEEeccCCCceEEEEECCCCCEEEEEcC-CCeEEEEECCCCcEE
Confidence 99988877644 333 999999999999999999 999999999988754
No 40
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.97 E-value=3.2e-30 Score=235.62 Aligned_cols=185 Identities=14% Similarity=0.141 Sum_probs=157.9
Q ss_pred CCCCCCCceEEE-EeeCCC--eEEEEecCCCCcEEEEEEecCCCEEEEEcCC----CcEEEEeCCCCeeeEEeccccCCe
Q psy3337 90 NSIDSKEKNLRF-GFKTFD--SVQTVFAGSESLQRVVRLSRNGDLMVTGGTD----GHLRLWSFPKMKPLLHIEAHSKEI 162 (297)
Q Consensus 90 ~~~~~~d~~i~~-~~~~~~--~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d----~~i~iwd~~~~~~~~~~~~~~~~v 162 (297)
..+++.|++|+| ++.+++ ....+. +|...|.+++|+|++++|++++.+ +.|++|| .++....+.+|...|
T Consensus 74 lasg~~d~~v~lWd~~~~~~~~~~~~~-~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd--~~~~~~~l~gh~~~v 150 (611)
T 1nr0_A 74 CASGDVHGNVRIWDTTQTTHILKTTIP-VFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFD--TGTSNGNLTGQARAM 150 (611)
T ss_dssp EEEEETTSEEEEEESSSTTCCEEEEEE-CSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETT--TCCBCBCCCCCSSCE
T ss_pred EEEEeCCCCEEEeECCCCcceeeEeec-ccCCceEEEEECCCCCEEEEEECCCCceeEEEEee--CCCCcceecCCCCCc
Confidence 568889999999 776544 344555 999999999999999999998865 4788887 456677889999999
Q ss_pred eEEEEccCCC-EEEEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCC
Q psy3337 163 DDVDFSISGE-QIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGIS 241 (297)
Q Consensus 163 ~~~~~sp~~~-~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~ 241 (297)
.+++|+|++. .|++++.|++|++||..+++.+..+..|.. .+..++|+|++++|++++ .|+
T Consensus 151 ~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~----------~V~~v~fspdg~~las~s--------~D~ 212 (611)
T 1nr0_A 151 NSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTK----------FVHSVRYNPDGSLFASTG--------GDG 212 (611)
T ss_dssp EEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSS----------CEEEEEECTTSSEEEEEE--------TTS
T ss_pred eEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccC----------ceEEEEECCCCCEEEEEE--------CCC
Confidence 9999999987 599999999999999998888888877752 234588999999999954 499
Q ss_pred eEEEEeCCCCceEEEec-------cCCC-eEEEEEcCCCCEEEEEecCCCeEEEEEeCCceec
Q psy3337 242 YVQQWDVDSGRLRLARE-------MKES-LSALAVRDDGRFVAVGTMFTGSVFVYIAFSLQMC 296 (297)
Q Consensus 242 ~i~~wd~~~~~~~~~~~-------~~~~-v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~~~~~ 296 (297)
.|++||+.+++++..+. +|.. |.+++|+|+|++|++++. |++|++||+.+++.+
T Consensus 213 ~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~-D~~v~lWd~~~~~~~ 274 (611)
T 1nr0_A 213 TIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASA-DKTIKIWNVATLKVE 274 (611)
T ss_dssp CEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEET-TSEEEEEETTTTEEE
T ss_pred cEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeC-CCeEEEEeCCCCcee
Confidence 99999999999888874 5665 999999999999999999 999999999987654
No 41
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.97 E-value=1e-30 Score=229.48 Aligned_cols=172 Identities=13% Similarity=0.151 Sum_probs=137.8
Q ss_pred cCCCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCC-CeeeE-------EeccccCCeeEEEEccCC-CEEEEEeCCCcEE
Q psy3337 114 AGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPK-MKPLL-------HIEAHSKEIDDVDFSISG-EQIVSIAKDGKAF 184 (297)
Q Consensus 114 ~~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~-~~~~~-------~~~~~~~~v~~~~~sp~~-~~l~s~~~d~~v~ 184 (297)
.+|...|++++|+|++++|++| .|+.|++||+++ ++.+. .+.+|...|.+++|+|++ ++|++++.|+.|+
T Consensus 174 ~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~ 252 (447)
T 3dw8_B 174 NAHTYHINSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIR 252 (447)
T ss_dssp SCCSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEE
T ss_pred cCCCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEE
Confidence 4899999999999999999999 799999999984 44443 366899999999999998 9999999999999
Q ss_pred EEEcCCCce----eeeeeccCCCCce--EEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCC-CceEEEe
Q psy3337 185 VWNSKNGSL----SKELKWNTPDNIK--YLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDS-GRLRLAR 257 (297)
Q Consensus 185 lwd~~~~~~----~~~~~~~~~~~~~--~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~-~~~~~~~ 257 (297)
+||+++++. +..+..|...... +......+..++|+|++.+|++ ++. +.|++||+++ ++++..+
T Consensus 253 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~--------~~~-~~v~iwd~~~~~~~~~~~ 323 (447)
T 3dw8_B 253 LCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMT--------RDY-LSVKVWDLNMENRPVETY 323 (447)
T ss_dssp EEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEE--------EES-SEEEEEETTCCSSCSCCE
T ss_pred EEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEE--------eeC-CeEEEEeCCCCcccccee
Confidence 999998876 5666655310000 0000013456889999999987 455 9999999997 8888888
Q ss_pred ccCCCeE----------------EEEEcCCCCEEEEEecCCCeEEEEEeCCceec
Q psy3337 258 EMKESLS----------------ALAVRDDGRFVAVGTMFTGSVFVYIAFSLQMC 296 (297)
Q Consensus 258 ~~~~~v~----------------~~~~s~dg~~l~~~~~~dg~i~vwd~~~~~~~ 296 (297)
..|..+. .++|+|++++|++|+. ||.|++||+.+++.+
T Consensus 324 ~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~-dg~v~iwd~~~~~~~ 377 (447)
T 3dw8_B 324 QVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSY-NNFFRMFDRNTKRDI 377 (447)
T ss_dssp ESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECS-TTEEEEEETTTCCEE
T ss_pred eccccccccccccccccccccceEEEECCCCCEEEEecc-CCEEEEEEcCCCcce
Confidence 8876522 3999999999999999 999999999987653
No 42
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.97 E-value=6.5e-30 Score=236.93 Aligned_cols=186 Identities=22% Similarity=0.203 Sum_probs=161.2
Q ss_pred CCCCCCCceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCeeeEE---eccccCCeeEE
Q psy3337 90 NSIDSKEKNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLH---IEAHSKEIDDV 165 (297)
Q Consensus 90 ~~~~~~d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~---~~~~~~~v~~~ 165 (297)
..+++.|++|++ ++.++..+..+. +|...|.+++|+|++++|++|+.|++|++||+........ ..+|...|.++
T Consensus 445 l~sgs~Dg~v~vwd~~~~~~~~~~~-~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~ 523 (694)
T 3dm0_A 445 ALSGSWDGELRLWDLAAGVSTRRFV-GHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCV 523 (694)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEE-CCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEE
T ss_pred EEEEeCCCcEEEEECCCCcceeEEe-CCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEE
Confidence 458899999999 999999988888 9999999999999999999999999999999865443322 24688899999
Q ss_pred EEccCC--CEEEEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeE
Q psy3337 166 DFSISG--EQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYV 243 (297)
Q Consensus 166 ~~sp~~--~~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i 243 (297)
+|+|++ ..|++++.|++|++||+++++....+..|.. .+..++|+|++.+|+++ +.|+.|
T Consensus 524 ~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~----------~v~~v~~spdg~~l~sg--------~~Dg~i 585 (694)
T 3dm0_A 524 RFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTG----------YVSTVAVSPDGSLCASG--------GKDGVV 585 (694)
T ss_dssp EECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSS----------CEEEEEECTTSSEEEEE--------ETTSBC
T ss_pred EEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCC----------CEEEEEEeCCCCEEEEE--------eCCCeE
Confidence 999986 5899999999999999999988888877752 23458899999999994 459999
Q ss_pred EEEeCCCCceEEEeccCCCeEEEEEcCCCCEEEEEecCCCeEEEEEeCCceec
Q psy3337 244 QQWDVDSGRLRLAREMKESLSALAVRDDGRFVAVGTMFTGSVFVYIAFSLQMC 296 (297)
Q Consensus 244 ~~wd~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~~~~~ 296 (297)
++||+.+++.+..+..+..|.+++|+|++.+|++++ ++.|++||+.+++.+
T Consensus 586 ~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~--~~~i~iwd~~~~~~~ 636 (694)
T 3dm0_A 586 LLWDLAEGKKLYSLEANSVIHALCFSPNRYWLCAAT--EHGIKIWDLESKSIV 636 (694)
T ss_dssp EEEETTTTEEEECCBCSSCEEEEEECSSSSEEEEEE--TTEEEEEETTTTEEE
T ss_pred EEEECCCCceEEEecCCCcEEEEEEcCCCcEEEEEc--CCCEEEEECCCCCCh
Confidence 999999999998888877799999999999998887 667999999987654
No 43
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.97 E-value=6.8e-30 Score=215.89 Aligned_cols=247 Identities=12% Similarity=0.045 Sum_probs=182.4
Q ss_pred CcceeeeCCCccEEEeccCCceeeEEEeeEEeeccccccccCCCCchhhhhhcccccchhhhhccCCCcccccccCCCCC
Q psy3337 1 MNCDVHSNGKNIYVVAGQENSNQLYKITAEFTQMNGVVKSKESNNTADTIVRKRKEKDKENAKQKGGKKEKSNEKGKNKK 80 (297)
Q Consensus 1 ~~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (297)
++|+.|++++++|++|+.|+.++||++........... ...++...-..- .
T Consensus 14 v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~--------~~~~~~~~v~~~---------------------~ 64 (351)
T 3f3f_A 14 VHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSD--------SWRAHDSSIVAI---------------------D 64 (351)
T ss_dssp EEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEE--------EEECCSSCEEEE---------------------E
T ss_pred eeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecc--------eeccCCCcEEEE---------------------E
Confidence 35777999999999999999999999975311000000 000000000000 0
Q ss_pred CCCCCCCCcCCCCCCCceEEE-EeeCC---------CeEEEEecCCCCcEEEEEEecC--CCEEEEEcCCCcEEEEeCCC
Q psy3337 81 DKIEDPPILNSIDSKEKNLRF-GFKTF---------DSVQTVFAGSESLQRVVRLSRN--GDLMVTGGTDGHLRLWSFPK 148 (297)
Q Consensus 81 ~~~~~~~~l~~~~~~d~~i~~-~~~~~---------~~~~~~~~~h~~~v~~~~~s~~--g~~l~s~~~d~~i~iwd~~~ 148 (297)
.......-+..+++.|++|++ ++.++ +.+..+. +|...|.+++|+|+ +++|++++.|+.|++||+++
T Consensus 65 ~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~ 143 (351)
T 3f3f_A 65 WASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLN-DSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALE 143 (351)
T ss_dssp ECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEEC-CCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSS
T ss_pred EcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeec-ccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCC
Confidence 000000112557888999999 88876 4466666 89999999999999 99999999999999999987
Q ss_pred CeeeEEec-------------cccCCeeEEEEccC---CCEEEEEeCCCcEEEEEcCCCce--eeeeeccCCCCceEEEE
Q psy3337 149 MKPLLHIE-------------AHSKEIDDVDFSIS---GEQIVSIAKDGKAFVWNSKNGSL--SKELKWNTPDNIKYLFK 210 (297)
Q Consensus 149 ~~~~~~~~-------------~~~~~v~~~~~sp~---~~~l~s~~~d~~v~lwd~~~~~~--~~~~~~~~~~~~~~~~~ 210 (297)
++.+..+. .|...+.+++|+|+ +.+|++++.|+.+.+|+...+.. +..+..|.
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~--------- 214 (351)
T 3f3f_A 144 PSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHK--------- 214 (351)
T ss_dssp TTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCC---------
T ss_pred hHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCC---------
Confidence 76544332 57788999999997 89999999999998888777654 44444443
Q ss_pred eeeeeeeeeCCCC----eEEEEeccCcccccCCCCeEEEEeCCCC-----------------------------------
Q psy3337 211 RCRYGLVEDSPKR----SRLFTLANPLAQNKRGISYVQQWDVDSG----------------------------------- 251 (297)
Q Consensus 211 ~~~~~~~~~s~~~----~~l~~~~~~~~~~g~~d~~i~~wd~~~~----------------------------------- 251 (297)
..+..++|+|++ .+|+++ +.|+.|++||++.+
T Consensus 215 -~~i~~~~~~p~~~~~~~~l~s~--------~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (351)
T 3f3f_A 215 -SLIRSISWAPSIGRWYQLIATG--------CKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTE 285 (351)
T ss_dssp -SCEEEEEECCCSSCSSEEEEEE--------ETTSCEEEEEEEECC----------------------------------
T ss_pred -cceeEEEECCCCCCcceEEEEE--------cCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccc
Confidence 234458899998 788884 45999999999864
Q ss_pred -----------ceEEEeccCCC-eEEEEEcCCCCEEEEEecCCCeEEEEEeCCceec
Q psy3337 252 -----------RLRLAREMKES-LSALAVRDDGRFVAVGTMFTGSVFVYIAFSLQMC 296 (297)
Q Consensus 252 -----------~~~~~~~~~~~-v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~~~~~ 296 (297)
+.+..+.+|.. |++++|+|++++|++++. ||.|++||+.+++.+
T Consensus 286 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~-dg~v~iw~~~~~~~~ 341 (351)
T 3f3f_A 286 EKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGD-DGKVRLWKATYSNEF 341 (351)
T ss_dssp -----CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEET-TSCEEEEEECTTSCE
T ss_pred eeeeecccccccEEEEEecccccEEEEEEcCCCCEEEEecC-CCcEEEEecCcCcch
Confidence 56667777766 999999999999999999 999999999987543
No 44
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.6e-29 Score=216.70 Aligned_cols=237 Identities=12% Similarity=0.105 Sum_probs=177.8
Q ss_pred cceeeeCCCccEEEeccCCceeeEEEee--EEeeccccccccCCCCchhhhhhccc-ccchhhhhccCCCcccccccCCC
Q psy3337 2 NCDVHSNGKNIYVVAGQENSNQLYKITA--EFTQMNGVVKSKESNNTADTIVRKRK-EKDKENAKQKGGKKEKSNEKGKN 78 (297)
Q Consensus 2 ~~~~~~~~~~~~~~~g~d~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~ 78 (297)
+|..|++++++|++|+.|+.++||++.. ..... .. .++...- ...-...
T Consensus 15 ~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~--~~----------~~h~~~v~~~~~~~~---------------- 66 (379)
T 3jrp_A 15 HDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLID--TL----------TGHEGPVWRVDWAHP---------------- 66 (379)
T ss_dssp EEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEE--EE----------CCCSSCEEEEEECCG----------------
T ss_pred EEEEEcCCCCEEEEEECCCcEEEEecCCCcceeee--Ee----------cCCCCcEEEEEeCCC----------------
Confidence 5677899999999999999999999973 22110 00 0000000 0000000
Q ss_pred CCCCCCCCCCcCCCCCCCceEEE-EeeCCC--eEEEEecCCCCcEEEEEEecC--CCEEEEEcCCCcEEEEeCCCCe--e
Q psy3337 79 KKDKIEDPPILNSIDSKEKNLRF-GFKTFD--SVQTVFAGSESLQRVVRLSRN--GDLMVTGGTDGHLRLWSFPKMK--P 151 (297)
Q Consensus 79 ~~~~~~~~~~l~~~~~~d~~i~~-~~~~~~--~~~~~~~~h~~~v~~~~~s~~--g~~l~s~~~d~~i~iwd~~~~~--~ 151 (297)
...-+..+++.|+.|++ ++.+++ .+..+. +|...|.+++|+|+ +++|++++.|+.|++||+.++. .
T Consensus 67 ------~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~ 139 (379)
T 3jrp_A 67 ------KFGTILASCSYDGKVLIWKEENGRWSQIAVHA-VHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTS 139 (379)
T ss_dssp ------GGCSEEEEEETTSCEEEEEEETTEEEEEEEEC-CCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCC
T ss_pred ------CCCCEEEEeccCCEEEEEEcCCCceeEeeeec-CCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCcee
Confidence 00112557888999999 888887 555565 89999999999999 9999999999999999998763 4
Q ss_pred eEEeccccCCeeEEEEcc-------------CCCEEEEEeCCCcEEEEEcCCCcee----eeeeccCCCCceEEEEeeee
Q psy3337 152 LLHIEAHSKEIDDVDFSI-------------SGEQIVSIAKDGKAFVWNSKNGSLS----KELKWNTPDNIKYLFKRCRY 214 (297)
Q Consensus 152 ~~~~~~~~~~v~~~~~sp-------------~~~~l~s~~~d~~v~lwd~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 214 (297)
...+..|...|.+++|+| ++.+|++++.|+.|++||++++... ..+..|. ..+
T Consensus 140 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~----------~~v 209 (379)
T 3jrp_A 140 PIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHS----------DWV 209 (379)
T ss_dssp EEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCS----------SCE
T ss_pred eEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEeccc----------CcE
Confidence 456778999999999999 6999999999999999999876533 3344343 234
Q ss_pred eeeeeCCC---CeEEEEeccCcccccCCCCeEEEEeCCCCc---eEEEecc--CCC-eEEEEEcCCCCEEEEEecCCCeE
Q psy3337 215 GLVEDSPK---RSRLFTLANPLAQNKRGISYVQQWDVDSGR---LRLAREM--KES-LSALAVRDDGRFVAVGTMFTGSV 285 (297)
Q Consensus 215 ~~~~~s~~---~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~---~~~~~~~--~~~-v~~~~~s~dg~~l~~~~~~dg~i 285 (297)
..++|+|+ +.+|++++. |+.|++||+.++. ....+.. +.. |.+++|+|+|++|++++. ||.|
T Consensus 210 ~~~~~sp~~~~~~~l~s~~~--------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-dg~i 280 (379)
T 3jrp_A 210 RDVAWSPTVLLRSYLASVSQ--------DRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGG-DNKV 280 (379)
T ss_dssp EEEEECCCCSSSEEEEEEET--------TSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEES-SSSE
T ss_pred eEEEECCCCCCCCeEEEEeC--------CCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecC-CCcE
Confidence 45889999 899998554 9999999999864 2223222 444 999999999999999999 9999
Q ss_pred EEEEeCC
Q psy3337 286 FVYIAFS 292 (297)
Q Consensus 286 ~vwd~~~ 292 (297)
++|++..
T Consensus 281 ~iw~~~~ 287 (379)
T 3jrp_A 281 TLWKENL 287 (379)
T ss_dssp EEEEEEE
T ss_pred EEEeCCC
Confidence 9999874
No 45
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.97 E-value=2.1e-30 Score=222.48 Aligned_cols=180 Identities=8% Similarity=0.030 Sum_probs=147.1
Q ss_pred CCCCCCceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCeeeE--EeccccCCeeEEEE
Q psy3337 91 SIDSKEKNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLL--HIEAHSKEIDDVDF 167 (297)
Q Consensus 91 ~~~~~d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~--~~~~~~~~v~~~~~ 167 (297)
.+++.|++|+| ++.+++.+..+ .|...|.+++|+|||++|++++.+ .+.+|+..+++.+. ....|...|.+++|
T Consensus 151 as~~~d~~i~iwd~~~~~~~~~~--~~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~v~f 227 (365)
T 4h5i_A 151 ASSKVPAIMRIIDPSDLTEKFEI--ETRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSCIARKTDFDKNWSLSKINF 227 (365)
T ss_dssp EESCSSCEEEEEETTTTEEEEEE--ECSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCEEEEECCCCTTEEEEEEEE
T ss_pred EECCCCCEEEEeECCCCcEEEEe--CCCCceEEEEEccCCceEEeccce-eEEEEEeccCcceeeeecCCCCCCEEEEEE
Confidence 36778999999 99999888877 577789999999999999999855 56667766666543 44568889999999
Q ss_pred ccCCCEEEEEeCCC----cEEEEEcCCCcee----eeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCC
Q psy3337 168 SISGEQIVSIAKDG----KAFVWNSKNGSLS----KELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRG 239 (297)
Q Consensus 168 sp~~~~l~s~~~d~----~v~lwd~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~ 239 (297)
+|+++++++++.|+ .+++||+...... ..+..|. ..+..++|+|+|++|++ |+.
T Consensus 228 spdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~----------~~V~~~~~Spdg~~las--------gs~ 289 (365)
T 4h5i_A 228 IADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRF----------KGITSMDVDMKGELAVL--------ASN 289 (365)
T ss_dssp EETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSC----------SCEEEEEECTTSCEEEE--------EET
T ss_pred cCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCC----------CCeEeEEECCCCCceEE--------EcC
Confidence 99999999998887 6888998765432 2232332 22446889999999999 455
Q ss_pred CCeEEEEeCCCCceEEEe-ccCCC-eEEEEEcCCCCEEEEEecCCCeEEEEEeCC
Q psy3337 240 ISYVQQWDVDSGRLRLAR-EMKES-LSALAVRDDGRFVAVGTMFTGSVFVYIAFS 292 (297)
Q Consensus 240 d~~i~~wd~~~~~~~~~~-~~~~~-v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~ 292 (297)
|+.|++||+.+++++..+ .+|.. |++++|+|||++|++|+. |++|+|||++.
T Consensus 290 D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~-D~tvrvw~ip~ 343 (365)
T 4h5i_A 290 DNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSA-ANTIHIIKLPL 343 (365)
T ss_dssp TSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEET-TSEEEEEECCT
T ss_pred CCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeC-CCeEEEEEcCC
Confidence 999999999999998875 67877 999999999999999999 99999999864
No 46
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.97 E-value=8.1e-30 Score=236.26 Aligned_cols=235 Identities=17% Similarity=0.177 Sum_probs=178.4
Q ss_pred cceeeeCCCccEEEeccCCceeeEEEeeEEeeccccccccCCCCchhhhhhcccccchhhhhccCCCcccccccCCCCCC
Q psy3337 2 NCDVHSNGKNIYVVAGQENSNQLYKITAEFTQMNGVVKSKESNNTADTIVRKRKEKDKENAKQKGGKKEKSNEKGKNKKD 81 (297)
Q Consensus 2 ~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (297)
+|+.|++++++|++|+.|+.++||++........ ..++.......
T Consensus 434 ~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~------------~~~h~~~v~~~----------------------- 478 (694)
T 3dm0_A 434 EDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRR------------FVGHTKDVLSV----------------------- 478 (694)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEETTTTEEEEE------------EECCSSCEEEE-----------------------
T ss_pred EEEEECCCCCEEEEEeCCCcEEEEECCCCcceeE------------EeCCCCCEEEE-----------------------
Confidence 4667899999999999999999999865432110 00000000000
Q ss_pred CCCCCCCcCCCCCCCceEEEEeeCCCeEEEEe---cCCCCcEEEEEEecCC--CEEEEEcCCCcEEEEeCCCCeeeEEec
Q psy3337 82 KIEDPPILNSIDSKEKNLRFGFKTFDSVQTVF---AGSESLQRVVRLSRNG--DLMVTGGTDGHLRLWSFPKMKPLLHIE 156 (297)
Q Consensus 82 ~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~~~---~~h~~~v~~~~~s~~g--~~l~s~~~d~~i~iwd~~~~~~~~~~~ 156 (297)
...+..-...+++.|++|+++-..+.....+. .+|...|.+++|+|++ ..|++|+.|+.|++||+++++....+.
T Consensus 479 ~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~ 558 (694)
T 3dm0_A 479 AFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLA 558 (694)
T ss_dssp EECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred EEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEc
Confidence 00000111457889999999433344443432 3689999999999987 689999999999999999999999999
Q ss_pred cccCCeeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccc
Q psy3337 157 AHSKEIDDVDFSISGEQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQN 236 (297)
Q Consensus 157 ~~~~~v~~~~~sp~~~~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~ 236 (297)
+|...|++++|+|++++|++++.|++|++||+++++.+..+..+. .+..++|+|++.++++..
T Consensus 559 ~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~~-----------~v~~~~~sp~~~~l~~~~------ 621 (694)
T 3dm0_A 559 GHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANS-----------VIHALCFSPNRYWLCAAT------ 621 (694)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBCSS-----------CEEEEEECSSSSEEEEEE------
T ss_pred CCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecCCC-----------cEEEEEEcCCCcEEEEEc------
Confidence 999999999999999999999999999999999998887765432 234578999998877643
Q ss_pred cCCCCeEEEEeCCCCceEEEeccCC--------------------CeEEEEEcCCCCEEEEEecCCCeEEEEEeCC
Q psy3337 237 KRGISYVQQWDVDSGRLRLAREMKE--------------------SLSALAVRDDGRFVAVGTMFTGSVFVYIAFS 292 (297)
Q Consensus 237 g~~d~~i~~wd~~~~~~~~~~~~~~--------------------~v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~ 292 (297)
++.|++||+.+++++..+..+. .+.+++|+|||++|++|+. ||.|+|||+..
T Consensus 622 ---~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~-Dg~i~iW~i~~ 693 (694)
T 3dm0_A 622 ---EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYT-DGVIRVWGIGR 693 (694)
T ss_dssp ---TTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEET-TSEEEEEEC--
T ss_pred ---CCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcC-CCeEEEEeccC
Confidence 5679999999988887664321 1678999999999999999 99999999864
No 47
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.97 E-value=5.3e-30 Score=221.54 Aligned_cols=195 Identities=15% Similarity=0.158 Sum_probs=160.6
Q ss_pred CCCCCCCceEEE-EeeC------CCeEE-----EEe------cCCCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCee
Q psy3337 90 NSIDSKEKNLRF-GFKT------FDSVQ-----TVF------AGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKP 151 (297)
Q Consensus 90 ~~~~~~d~~i~~-~~~~------~~~~~-----~~~------~~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~ 151 (297)
..+++.|+.|++ ++.+ ++.+. .+. ..|...|.+++|+|++ +|++++.|+.|++||+++++.
T Consensus 141 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~ 219 (397)
T 1sq9_A 141 LVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRP 219 (397)
T ss_dssp EEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEE
T ss_pred EEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCce
Confidence 446778999999 8888 66665 663 2588999999999999 999999999999999999999
Q ss_pred eEEecc---c---cCCeeEEEEccCCCEEEEEeCC---CcEEEEEcCCCceeeeeeccCCCCceEEE---Eeeeeeeeee
Q psy3337 152 LLHIEA---H---SKEIDDVDFSISGEQIVSIAKD---GKAFVWNSKNGSLSKELKWNTPDNIKYLF---KRCRYGLVED 219 (297)
Q Consensus 152 ~~~~~~---~---~~~v~~~~~sp~~~~l~s~~~d---~~v~lwd~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 219 (297)
+..+.. | ...|.+++|+|++++|++++.| +.|++||+++++.+..+............ ....+..++|
T Consensus 220 ~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 299 (397)
T 1sq9_A 220 LYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSF 299 (397)
T ss_dssp EEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEE
T ss_pred eEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEE
Confidence 999998 9 9999999999999999999999 99999999999888888761100000000 1123446889
Q ss_pred CCCCeEEEEeccCcccccCCCCeEEEEeCCCCceEEEec------cC---------------CC-eEEEEEcCCC-----
Q psy3337 220 SPKRSRLFTLANPLAQNKRGISYVQQWDVDSGRLRLARE------MK---------------ES-LSALAVRDDG----- 272 (297)
Q Consensus 220 s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~------~~---------------~~-v~~~~~s~dg----- 272 (297)
+|++.+|++++ .|+.|++||+.+++++..+. .| .. |.+++|+|+|
T Consensus 300 ~~~~~~l~~~~--------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~ 371 (397)
T 1sq9_A 300 NDSGETLCSAG--------WDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGM 371 (397)
T ss_dssp CSSSSEEEEEE--------TTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBST
T ss_pred CCCCCEEEEEe--------CCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccc
Confidence 99999999854 49999999999999999998 65 55 9999999998
Q ss_pred -----CEEEEEecCCCeEEEEEeCCce
Q psy3337 273 -----RFVAVGTMFTGSVFVYIAFSLQ 294 (297)
Q Consensus 273 -----~~l~~~~~~dg~i~vwd~~~~~ 294 (297)
.+|++++. ||.|++||+.+++
T Consensus 372 ~~~~~~~l~s~~~-dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 372 GADLNESLCCVCL-DRSIRWFREAGGK 397 (397)
T ss_dssp TCTTSCEEEEEET-TTEEEEEEEEC--
T ss_pred cccccceEEEecC-CCcEEEEEcCCCC
Confidence 79999999 9999999998874
No 48
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.97 E-value=4.8e-29 Score=210.31 Aligned_cols=235 Identities=12% Similarity=0.171 Sum_probs=183.1
Q ss_pred cceeeeCCCccEEEeccCCceeeEEEeeEEeeccccccccCCCCchhhhhhcccccchhhhhccCCCcccccccCCCCCC
Q psy3337 2 NCDVHSNGKNIYVVAGQENSNQLYKITAEFTQMNGVVKSKESNNTADTIVRKRKEKDKENAKQKGGKKEKSNEKGKNKKD 81 (297)
Q Consensus 2 ~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (297)
+|+.|++++++|++++.|+.+++|++............... ..- ....
T Consensus 101 ~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~-------~~i--~~~~----------------------- 148 (337)
T 1gxr_A 101 RSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSA-------PAC--YALA----------------------- 148 (337)
T ss_dssp EEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSS-------SCE--EEEE-----------------------
T ss_pred EEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCC-------Cce--EEEE-----------------------
Confidence 45668899999999999999999998654311000000000 000 0000
Q ss_pred CCCCCCCcCCCCCCCceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCeeeEEeccccC
Q psy3337 82 KIEDPPILNSIDSKEKNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSK 160 (297)
Q Consensus 82 ~~~~~~~l~~~~~~d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~ 160 (297)
..+..-...+++.|+.|++ ++.+++.+..+. +|...|.+++|+|++++|++++.|+.|++||+++++.+..+. +..
T Consensus 149 -~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~ 225 (337)
T 1gxr_A 149 -ISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQ-GHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD-FTS 225 (337)
T ss_dssp -ECTTSSEEEEEETTSCEEEEETTTTEEEEEEC-CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSS
T ss_pred -ECCCCCEEEEEeCCCcEEEEeCCCCceeeeee-cccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeec-CCC
Confidence 0000111446778999999 999998888887 899999999999999999999999999999999998887775 778
Q ss_pred CeeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCC
Q psy3337 161 EIDDVDFSISGEQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGI 240 (297)
Q Consensus 161 ~v~~~~~sp~~~~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d 240 (297)
.+.+++|+|++++|++++.|+.|++||+++++.. .+..|. ..+..++|+|++.+|++.+. |
T Consensus 226 ~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~-~~~~~~----------~~v~~~~~~~~~~~l~~~~~--------d 286 (337)
T 1gxr_A 226 QIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKY-QLHLHE----------SCVLSLKFAYCGKWFVSTGK--------D 286 (337)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTSSCEE-EECCCS----------SCEEEEEECTTSSEEEEEET--------T
T ss_pred ceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeE-EEcCCc----------cceeEEEECCCCCEEEEecC--------C
Confidence 8999999999999999999999999999887653 333332 12445889999999998554 9
Q ss_pred CeEEEEeCCCCceEEEeccCCCeEEEEEcCCCCEEEEEecCCCeEEEEEeC
Q psy3337 241 SYVQQWDVDSGRLRLAREMKESLSALAVRDDGRFVAVGTMFTGSVFVYIAF 291 (297)
Q Consensus 241 ~~i~~wd~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~dg~i~vwd~~ 291 (297)
+.|++||+.+++.+........|.+++|+|++++|++++. ||.|++|++.
T Consensus 287 g~i~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-dg~i~iw~~~ 336 (337)
T 1gxr_A 287 NLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSG-DKKATVYEVI 336 (337)
T ss_dssp SEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEET-TSCEEEEEEE
T ss_pred CcEEEEECCCCeEEEEecCCCcEEEEEECCCCCEEEEecC-CCeEEEEEEe
Confidence 9999999999988877666666999999999999999999 9999999973
No 49
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.97 E-value=7.4e-30 Score=221.88 Aligned_cols=248 Identities=13% Similarity=0.113 Sum_probs=189.9
Q ss_pred cceeeeCCCccEEEeccCCceeeEEEeeEEeeccccccccCCCCchhhhhhcccccchhhhhccCCCcccccccCCCCCC
Q psy3337 2 NCDVHSNGKNIYVVAGQENSNQLYKITAEFTQMNGVVKSKESNNTADTIVRKRKEKDKENAKQKGGKKEKSNEKGKNKKD 81 (297)
Q Consensus 2 ~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (297)
+|..|++++++|++++.|+.+++|++............... ........ .. . . +.. .....
T Consensus 153 ~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~-----~~~~~~~~-~~--~---~-~~~------~~~~~- 213 (425)
T 1r5m_A 153 VSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETG-----GSSINAEN-HS--G---D-GSL------GVDVE- 213 (425)
T ss_dssp EEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC---------------------------CCC------BSCCE-
T ss_pred EEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccC-----ccceeecc-cc--C---C-cce------eeEEE-
Confidence 45668899999999999999999998654322100000000 00000000 00 0 0 000 00000
Q ss_pred CCCCCCCcCCCCCCCceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCeeeEEeccccC
Q psy3337 82 KIEDPPILNSIDSKEKNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSK 160 (297)
Q Consensus 82 ~~~~~~~l~~~~~~d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~ 160 (297)
...+ -....++.|+.|++ ++.+++.+..+. +|...|.+++|+|++++|++++.|+.|++||+++++.+..+..|..
T Consensus 214 ~~~~--~~~~~~~~~g~i~~~d~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~ 290 (425)
T 1r5m_A 214 WVDD--DKFVIPGPKGAIFVYQITEKTPTGKLI-GHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQ 290 (425)
T ss_dssp EEET--TEEEEECGGGCEEEEETTCSSCSEEEC-CCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSS
T ss_pred EcCC--CEEEEEcCCCeEEEEEcCCCceeeeec-cCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCc
Confidence 0000 01346778999999 999998888887 9999999999999999999999999999999999999999999999
Q ss_pred CeeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCC
Q psy3337 161 EIDDVDFSISGEQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGI 240 (297)
Q Consensus 161 ~v~~~~~sp~~~~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d 240 (297)
.|.+++|+|++ +|++++.|+.|++||+++++.+..+..|.. .+..++|+|++.+|++++ .|
T Consensus 291 ~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~----------~i~~~~~s~~~~~l~~~~--------~d 351 (425)
T 1r5m_A 291 SIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGV----------PIFAGRISQDGQKYAVAF--------MD 351 (425)
T ss_dssp CEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTC----------CEEEEEECTTSSEEEEEE--------TT
T ss_pred cEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCc----------cEEEEEEcCCCCEEEEEE--------CC
Confidence 99999999999 999999999999999999988888876541 234578999999999855 49
Q ss_pred CeEEEEeCCCCc--------------------eEEEeccC--C-CeEEEEEcCCCCEEEEEecCCCeEEEEEeC
Q psy3337 241 SYVQQWDVDSGR--------------------LRLAREMK--E-SLSALAVRDDGRFVAVGTMFTGSVFVYIAF 291 (297)
Q Consensus 241 ~~i~~wd~~~~~--------------------~~~~~~~~--~-~v~~~~~s~dg~~l~~~~~~dg~i~vwd~~ 291 (297)
+.|++||+.+++ ++..+..+ . .|.+++|+|++++|++++. ||.|++||++
T Consensus 352 g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-dg~i~iw~~~ 424 (425)
T 1r5m_A 352 GQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYS-LQEGSVVAIP 424 (425)
T ss_dssp SCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEES-SSCCEEEECC
T ss_pred CeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEec-CceEEEEeec
Confidence 999999999887 88888887 5 6999999999999999999 9999999985
No 50
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.97 E-value=1.3e-30 Score=224.06 Aligned_cols=236 Identities=14% Similarity=0.062 Sum_probs=169.2
Q ss_pred CcceeeeCCCccEEEeccCCceeeEEEeeEEeeccccccccCCCCchhhhhhcccccchhhhhccCCCcccccccCCCCC
Q psy3337 1 MNCDVHSNGKNIYVVAGQENSNQLYKITAEFTQMNGVVKSKESNNTADTIVRKRKEKDKENAKQKGGKKEKSNEKGKNKK 80 (297)
Q Consensus 1 ~~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (297)
++|+.|++++++|++|+.|+.++||++........... .++...-..-
T Consensus 14 v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~----------~~h~~~v~~~---------------------- 61 (377)
T 3dwl_C 14 SYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTF----------SDHDKIVTCV---------------------- 61 (377)
T ss_dssp CSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCB----------CCCSSCEEEE----------------------
T ss_pred EEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEE----------ecCCceEEEE----------------------
Confidence 46777999999999999999999999985421100000 0000000000
Q ss_pred CCCCCCCCcCCCCCCCceEEE-EeeCCC---eEEEEecCCCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCe---eeE
Q psy3337 81 DKIEDPPILNSIDSKEKNLRF-GFKTFD---SVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMK---PLL 153 (297)
Q Consensus 81 ~~~~~~~~l~~~~~~d~~i~~-~~~~~~---~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~---~~~ 153 (297)
...+..-+..+++.|++|++ ++.+++ ....+. +|...|.+++|+|++++|++++.|+.|++||+++++ ...
T Consensus 62 -~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 139 (377)
T 3dwl_C 62 -DWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLL-RLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSK 139 (377)
T ss_dssp -EECTTTCCEEEEETTSSEEEC------CCCCEEECC-CCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCE
T ss_pred -EEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEec-ccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeee
Confidence 00000112557889999999 888876 555565 899999999999999999999999999999998876 467
Q ss_pred Eecc-ccCCeeEEEEccCCCEEEEEeCCCcEEEEEcCCC------------------ceeeeeeccCCCCceEEEEeeee
Q psy3337 154 HIEA-HSKEIDDVDFSISGEQIVSIAKDGKAFVWNSKNG------------------SLSKELKWNTPDNIKYLFKRCRY 214 (297)
Q Consensus 154 ~~~~-~~~~v~~~~~sp~~~~l~s~~~d~~v~lwd~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~ 214 (297)
.+.. |...|.+++|+|++++|++++.|+.|++||++.. +.+..+ .|. ..+
T Consensus 140 ~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----------~~v 208 (377)
T 3dwl_C 140 HLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSG----------GWV 208 (377)
T ss_dssp EECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCS----------SSE
T ss_pred EeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCC----------ceE
Confidence 7777 9999999999999999999999999999998633 222333 221 234
Q ss_pred eeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCCCce----EEEeccCCC-eEEEEEcCCCCEEEEEecCCCeEEEEE
Q psy3337 215 GLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSGRL----RLAREMKES-LSALAVRDDGRFVAVGTMFTGSVFVYI 289 (297)
Q Consensus 215 ~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~----~~~~~~~~~-v~~~~~s~dg~~l~~~~~~dg~i~vwd 289 (297)
..++|+|++++|++++ .|+.|++||+.+++. +..+..|.. |.+++|+|+|++|++++. ++.+ +|+
T Consensus 209 ~~~~~sp~~~~l~~~~--------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-~~~~-~~~ 278 (377)
T 3dwl_C 209 HAVGFSPSGNALAYAG--------HDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYN-YSPI-LLQ 278 (377)
T ss_dssp EEEEECTTSSCEEEEE--------TTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESS-SSEE-EEC
T ss_pred EEEEECCCCCEEEEEe--------CCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcC-CcEE-EEE
Confidence 5688999999999954 499999999999877 677777776 999999999999999986 6655 666
Q ss_pred eC
Q psy3337 290 AF 291 (297)
Q Consensus 290 ~~ 291 (297)
..
T Consensus 279 ~~ 280 (377)
T 3dwl_C 279 GN 280 (377)
T ss_dssp CC
T ss_pred eC
Confidence 54
No 51
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.97 E-value=9.7e-30 Score=217.01 Aligned_cols=193 Identities=15% Similarity=0.260 Sum_probs=155.2
Q ss_pred CCCCCCCceEEE-EeeCCCeEEEEecCCCCcEEEEEEec-CCCEEEEEcCCCcEEEEeCCCCeeeEEe---ccccCCeeE
Q psy3337 90 NSIDSKEKNLRF-GFKTFDSVQTVFAGSESLQRVVRLSR-NGDLMVTGGTDGHLRLWSFPKMKPLLHI---EAHSKEIDD 164 (297)
Q Consensus 90 ~~~~~~d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~-~g~~l~s~~~d~~i~iwd~~~~~~~~~~---~~~~~~v~~ 164 (297)
..+++.|+.|++ ++.+++.+..+. +|...|.+++|+| ++++|++|+.|+.|++||+++++.+..+ ..|...|.+
T Consensus 88 l~~~~~dg~i~v~d~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~ 166 (366)
T 3k26_A 88 LAVAGSRGIIRIINPITMQCIKHYV-GHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLS 166 (366)
T ss_dssp EEEEETTCEEEEECTTTCCEEEEEE-SCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEE
T ss_pred EEEecCCCEEEEEEchhceEeeeec-CCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeE
Confidence 557889999999 889999999988 9999999999999 8999999999999999999999988888 789999999
Q ss_pred EEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeec----------------------------cCC--------------
Q psy3337 165 VDFSISGEQIVSIAKDGKAFVWNSKNGSLSKELKW----------------------------NTP-------------- 202 (297)
Q Consensus 165 ~~~sp~~~~l~s~~~d~~v~lwd~~~~~~~~~~~~----------------------------~~~-------------- 202 (297)
++|+|++++|++++.|+.|++||+++++.+..+.. |..
T Consensus 167 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~ 246 (366)
T 3k26_A 167 ADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWLGDLILS 246 (366)
T ss_dssp EEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEETTEEEE
T ss_pred EEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEcCCEEEE
Confidence 99999999999999999999999987654322211 110
Q ss_pred ---CCceEEEE---------------------------eeeeeeeeeCCC--CeEEEEeccCcccccCCCCeEEEEeCCC
Q psy3337 203 ---DNIKYLFK---------------------------RCRYGLVEDSPK--RSRLFTLANPLAQNKRGISYVQQWDVDS 250 (297)
Q Consensus 203 ---~~~~~~~~---------------------------~~~~~~~~~s~~--~~~l~~~~~~~~~~g~~d~~i~~wd~~~ 250 (297)
++....+. ...+..++|+|+ +.+|++ |+.|+.|++||+.+
T Consensus 247 ~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~--------~~~dg~i~vwd~~~ 318 (366)
T 3k26_A 247 KSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLAL--------GNQVGKLYVWDLEV 318 (366)
T ss_dssp ECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEE--------ECTTSCEEEEECCS
T ss_pred EecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEE--------EecCCcEEEEECCC
Confidence 00000000 012334677788 888888 55599999999998
Q ss_pred Cc----eEEEeccC---CCeEEEEEcCCCCEEEEEecCCCeEEEEEeCC
Q psy3337 251 GR----LRLAREMK---ESLSALAVRDDGRFVAVGTMFTGSVFVYIAFS 292 (297)
Q Consensus 251 ~~----~~~~~~~~---~~v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~ 292 (297)
++ ....+..| ..|.+++|+|++++|++++. ||.|++||+.+
T Consensus 319 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~-dg~i~iwd~~~ 366 (366)
T 3k26_A 319 EDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCD-DASIWRWDRLR 366 (366)
T ss_dssp SSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEET-TSEEEEEEC--
T ss_pred CCCccccceEEcccccCCceEEEEeCCCCCeEEEEeC-CCEEEEEEecC
Confidence 65 44567766 34999999999999999999 99999999864
No 52
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.97 E-value=4.1e-31 Score=236.22 Aligned_cols=185 Identities=18% Similarity=0.151 Sum_probs=154.4
Q ss_pred cCCCCCCCceEEE-EeeCCCe-----------EEEEecCCCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCC-eeeEEe
Q psy3337 89 LNSIDSKEKNLRF-GFKTFDS-----------VQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKM-KPLLHI 155 (297)
Q Consensus 89 l~~~~~~d~~i~~-~~~~~~~-----------~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~-~~~~~~ 155 (297)
+..+++.|++|++ ++.++.. ...+. +|...|++++|+|++ .|++|+.||+|++||++++ .+...+
T Consensus 227 ~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~-~h~~~v~sv~~s~~~-~lasgs~DgtV~lWD~~~~~~~~~~~ 304 (524)
T 2j04_B 227 CLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLS-LADSLITTFDFLSPT-TVVCGFKNGFVAEFDLTDPEVPSFYD 304 (524)
T ss_dssp EEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEEC-CTTTCEEEEEESSSS-EEEEEETTSEEEEEETTBCSSCSEEE
T ss_pred eEEEEecCCeEEEEEcCCCccccccceeecCceEEEE-cCCCCEEEEEecCCC-eEEEEeCCCEEEEEECCCCCCceEEe
Confidence 3567889999999 8876542 23455 899999999999864 8999999999999999876 455678
Q ss_pred ccccCCeeEE--EEccCC-CEEEEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccC
Q psy3337 156 EAHSKEIDDV--DFSISG-EQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANP 232 (297)
Q Consensus 156 ~~~~~~v~~~--~~sp~~-~~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~ 232 (297)
.+|...|.++ +|+|++ .+|++++.|++|+|||+++++.+..+..|.+.. .+..++|+|++..+++.
T Consensus 305 ~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~--------~v~~v~fsp~~~~l~s~--- 373 (524)
T 2j04_B 305 QVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGS--------NLVPVVYCPQIYSYIYS--- 373 (524)
T ss_dssp ECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCC--------SCCCEEEETTTTEEEEE---
T ss_pred ecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccC--------cccceEeCCCcCeEEEe---
Confidence 8999999999 578887 899999999999999999887776666554211 12347899999988884
Q ss_pred cccccCCCCeEEEEeCCCCceEEEeccCCC-eEEEEEcCCCCEEEEEecCCCeEEEEEeCC
Q psy3337 233 LAQNKRGISYVQQWDVDSGRLRLAREMKES-LSALAVRDDGRFVAVGTMFTGSVFVYIAFS 292 (297)
Q Consensus 233 ~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~-v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~ 292 (297)
+.|++|++||++++.++..+.+|.. |++++|+|+|++|++|+. ||+|++||+..
T Consensus 374 -----~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~-Dgtv~lwd~~~ 428 (524)
T 2j04_B 374 -----DGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSA-DGSLIITNAAR 428 (524)
T ss_dssp -----CSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEET-TTEEECCBSCS
T ss_pred -----CCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEEC-CCEEEEEechH
Confidence 4499999999999988888888876 999999999999999999 99999999754
No 53
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.97 E-value=9.1e-30 Score=219.42 Aligned_cols=248 Identities=13% Similarity=0.119 Sum_probs=178.4
Q ss_pred cceeeeC-CCccEEEeccCCceeeEEEeeEEeeccccccccCCCCchhhhhhcccccchhhhhccCCCcccccccCCCCC
Q psy3337 2 NCDVHSN-GKNIYVVAGQENSNQLYKITAEFTQMNGVVKSKESNNTADTIVRKRKEKDKENAKQKGGKKEKSNEKGKNKK 80 (297)
Q Consensus 2 ~~~~~~~-~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (297)
+|..|++ ++++|++++.|+.+++|++.......... .... ... -....-
T Consensus 122 ~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~---~~~~----~~~--v~~~~~--------------------- 171 (383)
T 3ei3_B 122 TGMKFNQFNTNQLFVSSIRGATTLRDFSGSVIQVFAK---TDSW----DYW--YCCVDV--------------------- 171 (383)
T ss_dssp EEEEEETTEEEEEEEEETTTEEEEEETTSCEEEEEEC---CCCS----SCC--EEEEEE---------------------
T ss_pred eEEEeCCCCCCEEEEEeCCCEEEEEECCCCceEEEec---cCCC----CCC--eEEEEE---------------------
Confidence 3556777 67999999999999999987432211000 0000 000 000000
Q ss_pred CCCCCCCCcCCCCCCCceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCC-EEEEEcCCCcEEEEeCCC----CeeeEE
Q psy3337 81 DKIEDPPILNSIDSKEKNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGD-LMVTGGTDGHLRLWSFPK----MKPLLH 154 (297)
Q Consensus 81 ~~~~~~~~l~~~~~~d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~-~l~s~~~d~~i~iwd~~~----~~~~~~ 154 (297)
.+......+++.|+.|++ ++ +++.+..+. +|...|.+++|+|+++ +|++|+.|+.|++||+++ +..+..
T Consensus 172 ---~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~-~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~ 246 (383)
T 3ei3_B 172 ---SVSRQMLATGDSTGRLLLLGL-DGHEIFKEK-LHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAE 246 (383)
T ss_dssp ---ETTTTEEEEEETTSEEEEEET-TSCEEEEEE-CSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEE
T ss_pred ---CCCCCEEEEECCCCCEEEEEC-CCCEEEEec-cCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEE
Confidence 000112457888999999 76 678888888 9999999999999998 999999999999999987 556666
Q ss_pred eccccCCeeEEEEcc-CCCEEEEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccC-
Q psy3337 155 IEAHSKEIDDVDFSI-SGEQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANP- 232 (297)
Q Consensus 155 ~~~~~~~v~~~~~sp-~~~~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~- 232 (297)
+ +|...|.+++|+| ++.+|++++.|+.|++||+++++.+..+..|...... ....+ .+.|+|++..++....+
T Consensus 247 ~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~p~~~~~~~~~s~d 321 (383)
T 3ei3_B 247 M-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQ---HLTPI-KATWHPMYDLIVAGRYPD 321 (383)
T ss_dssp E-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCT---TSCCC-CCEECSSSSEEEEECBCC
T ss_pred e-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccccc---cccce-EEeccCCCCceEEEecCC
Confidence 6 6999999999999 9999999999999999999998887777655311000 00000 12345555544433221
Q ss_pred -cccccCCCCeEEEEeCCCCceEEEeccC--CC-eEEEEEcCCCCEEEEEecCCCeEEEEEeCC
Q psy3337 233 -LAQNKRGISYVQQWDVDSGRLRLAREMK--ES-LSALAVRDDGRFVAVGTMFTGSVFVYIAFS 292 (297)
Q Consensus 233 -~~~~g~~d~~i~~wd~~~~~~~~~~~~~--~~-v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~ 292 (297)
.. +|+.|+.|++||+.+++++..+..+ .. +..++|+|++++|++|+ |+.|++||+.+
T Consensus 322 g~~-s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s--d~~i~iw~~~~ 382 (383)
T 3ei3_B 322 DQL-LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASGM--GFNILIWNRED 382 (383)
T ss_dssp TTT-CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEEE--TTEEEEEECC-
T ss_pred ccc-ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEec--CCcEEEEecCC
Confidence 22 4778999999999999999999863 34 77789999999999995 99999999875
No 54
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.97 E-value=4.4e-29 Score=213.69 Aligned_cols=239 Identities=14% Similarity=0.054 Sum_probs=183.2
Q ss_pred CcceeeeCCCccEEEeccCCceeeEEEeeEEeeccccccccCCCCchhhhhhcccccchhhhhccCCCcccccccCCCCC
Q psy3337 1 MNCDVHSNGKNIYVVAGQENSNQLYKITAEFTQMNGVVKSKESNNTADTIVRKRKEKDKENAKQKGGKKEKSNEKGKNKK 80 (297)
Q Consensus 1 ~~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (297)
++|+.|++++++|++++.|+.++||++............... .. -....-.
T Consensus 11 i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~-------~~--v~~~~~~-------------------- 61 (372)
T 1k8k_C 11 ISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHN-------GQ--VTGVDWA-------------------- 61 (372)
T ss_dssp CCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCS-------SC--EEEEEEE--------------------
T ss_pred eEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCC-------Cc--ccEEEEe--------------------
Confidence 457779999999999999999999998765311000000000 00 0000000
Q ss_pred CCCCCCCCcCCCCCCCceEEE-EeeCCCeEEEEe-cCCCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCee----eEE
Q psy3337 81 DKIEDPPILNSIDSKEKNLRF-GFKTFDSVQTVF-AGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKP----LLH 154 (297)
Q Consensus 81 ~~~~~~~~l~~~~~~d~~i~~-~~~~~~~~~~~~-~~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~----~~~ 154 (297)
.+ .-+..+++.|+.|++ ++.+++....+. ..|...|.+++|+|++++|++++.|+.|++||+..++. ...
T Consensus 62 ---~~-~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~ 137 (372)
T 1k8k_C 62 ---PD-SNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHI 137 (372)
T ss_dssp ---TT-TTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEE
T ss_pred ---CC-CCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeee
Confidence 00 011456788999999 888887655543 47999999999999999999999999999999987652 233
Q ss_pred eccccCCeeEEEEccCCCEEEEEeCCCcEEEEEcC------------------CCceeeeeeccCCCCceEEEEeeeeee
Q psy3337 155 IEAHSKEIDDVDFSISGEQIVSIAKDGKAFVWNSK------------------NGSLSKELKWNTPDNIKYLFKRCRYGL 216 (297)
Q Consensus 155 ~~~~~~~v~~~~~sp~~~~l~s~~~d~~v~lwd~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (297)
...|...|.+++|+|++++|++++.|+.|++||++ .++.+..+..|. ..+..
T Consensus 138 ~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~v~~ 207 (372)
T 1k8k_C 138 KKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSC----------GWVHG 207 (372)
T ss_dssp CTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCS----------SCEEE
T ss_pred ecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCC----------CeEEE
Confidence 46789999999999999999999999999999964 455666665443 12445
Q ss_pred eeeCCCCeEEEEeccCcccccCCCCeEEEEeCCCCceEEEeccCCC-eEEEEEcCCCCEEEEEecCCCeEEEEEeCC
Q psy3337 217 VEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSGRLRLAREMKES-LSALAVRDDGRFVAVGTMFTGSVFVYIAFS 292 (297)
Q Consensus 217 ~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~-v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~ 292 (297)
++|+|++.+|++++ .|+.|++||+++++++..+..+.. |.+++|+|++.+|++| . |+.|++|++.+
T Consensus 208 ~~~~~~~~~l~~~~--------~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~-d~~i~i~~~~~ 274 (372)
T 1k8k_C 208 VCFSANGSRVAWVS--------HDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAG-H-DCFPVLFTYDS 274 (372)
T ss_dssp EEECSSSSEEEEEE--------TTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEE-T-TSSCEEEEEET
T ss_pred EEECCCCCEEEEEe--------CCCEEEEEECCCCceeEEEccCCCCeEEEEEecCCCEEEEE-e-CCeEEEEEccC
Confidence 88999999999855 499999999999999999988875 9999999999999888 6 99999999987
No 55
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.97 E-value=2.4e-29 Score=210.80 Aligned_cols=238 Identities=16% Similarity=0.179 Sum_probs=181.5
Q ss_pred cceeeeCCCccEEEeccCCceeeEEEeeEEeeccccccccCCCCchhhhhhcccccchhhhhccCCCcccccccCCCCCC
Q psy3337 2 NCDVHSNGKNIYVVAGQENSNQLYKITAEFTQMNGVVKSKESNNTADTIVRKRKEKDKENAKQKGGKKEKSNEKGKNKKD 81 (297)
Q Consensus 2 ~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (297)
+|+.|++++++|++|+.|+.++||++......... +++..+..
T Consensus 71 ~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~------------~~h~~~~~------------------------- 113 (318)
T 4ggc_A 71 SSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNM------------TSHSARVG------------------------- 113 (318)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE------------ECCSSCEE-------------------------
T ss_pred EEEEECCCCCEEEEEECCCcEEEeecCCceeEEEe------------cCccceEE-------------------------
Confidence 56779999999999999999999998654432100 00000000
Q ss_pred CCCCCCCcCCCCCCCceEEE-EeeCCC-eEEEEecCCCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCee----eEEe
Q psy3337 82 KIEDPPILNSIDSKEKNLRF-GFKTFD-SVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKP----LLHI 155 (297)
Q Consensus 82 ~~~~~~~l~~~~~~d~~i~~-~~~~~~-~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~----~~~~ 155 (297)
.....+.+..+++.++.+++ +..... .+..+. +|...+.++.+++++++|++++.|+.|++||+++++. ....
T Consensus 114 ~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~ 192 (318)
T 4ggc_A 114 SLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLS-GHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTF 192 (318)
T ss_dssp EEEEETTEEEEEETTSEEEEEETTSSSCEEEEEE-CCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEE
T ss_pred EeecCCCEEEEEecCCceEeeecCCCceeEEEEc-CccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeee
Confidence 00001112557888888988 665544 445555 9999999999999999999999999999999987653 3455
Q ss_pred ccccCCeeEEEEccCCCEE---EEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccC
Q psy3337 156 EAHSKEIDDVDFSISGEQI---VSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANP 232 (297)
Q Consensus 156 ~~~~~~v~~~~~sp~~~~l---~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~ 232 (297)
..|...|.++.++|++..+ ++++.+++|++||.+..........+. .+..+.|+|++..+++++
T Consensus 193 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~-----------~v~~~~~~~~~~~~~~~s-- 259 (318)
T 4ggc_A 193 TQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHS-----------QVCSILWSPHYKELISGH-- 259 (318)
T ss_dssp CCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSS-----------CEEEEEEETTTTEEEEEE--
T ss_pred cccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccccccccee-----------eeeeeeecccccceEEEE--
Confidence 6788899999999976543 356778999999998877665554332 123466889988887754
Q ss_pred cccccCCCCeEEEEeCCCCceEEEeccCCC-eEEEEEcCCCCEEEEEecCCCeEEEEEeCCcee
Q psy3337 233 LAQNKRGISYVQQWDVDSGRLRLAREMKES-LSALAVRDDGRFVAVGTMFTGSVFVYIAFSLQM 295 (297)
Q Consensus 233 ~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~-v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~~~~ 295 (297)
|+.|+.|++||+++++++..+.+|.. |++++|+|||++|++|+. ||+|+|||+..+.+
T Consensus 260 ----g~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~-D~~v~iWd~~~~dP 318 (318)
T 4ggc_A 260 ----GFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAA-DETLRLWRCFELDP 318 (318)
T ss_dssp ----CTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEET-TTEEEEECCSCCCC
T ss_pred ----EcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEec-CCeEEEEECCCCCC
Confidence 56799999999999999999999877 999999999999999999 99999999987653
No 56
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.97 E-value=1.2e-29 Score=210.73 Aligned_cols=182 Identities=12% Similarity=0.123 Sum_probs=140.9
Q ss_pred CCCCceEEE-Ee-eCCCeEEEEecCCCCcEEEEEEec---CCCEEEEEcCCCcEEEEeCCCCeeeEEecccc---CCeeE
Q psy3337 93 DSKEKNLRF-GF-KTFDSVQTVFAGSESLQRVVRLSR---NGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHS---KEIDD 164 (297)
Q Consensus 93 ~~~d~~i~~-~~-~~~~~~~~~~~~h~~~v~~~~~s~---~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~---~~v~~ 164 (297)
...|+.|++ ++ .+|+.+..+. +|...++.++|+| ++.+|++|+.|++|+|||+.+++.+.++.+|. ..+.+
T Consensus 153 ~g~d~~V~~~~~s~dG~~~~s~~-~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~ 231 (356)
T 2w18_A 153 TLSDQQVEVMTFAEDGGGKENQF-LMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCH 231 (356)
T ss_dssp SSTTCEEEEEEECTTSCEEEEEE-ECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEE
T ss_pred cCCCCcEEEEEECCCCceeeeec-cCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEE
Confidence 346889999 77 5588888888 9999999999999 77999999999999999999999999998654 36778
Q ss_pred EEEccCCCEE------------EEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccC
Q psy3337 165 VDFSISGEQI------------VSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANP 232 (297)
Q Consensus 165 ~~~sp~~~~l------------~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~ 232 (297)
++|+|++.++ ++|+.|++|++||+.+++.+..+....|.+....+ +..+.++..+++
T Consensus 232 vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~-------lsg~~sg~~lAS---- 300 (356)
T 2w18_A 232 KAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRF-------LEGDVKDHCAAA---- 300 (356)
T ss_dssp EEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCE-------EEEEEETTEEEE----
T ss_pred EEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCccee-------EccccCCCEEEE----
Confidence 8999999876 56788999999999999887655321111100000 111222555665
Q ss_pred cccccCCCCeEEEEeCCCCceEEEeccCCC--eEEEEEcCCCCEEEEEecCCCeEEEEEeC
Q psy3337 233 LAQNKRGISYVQQWDVDSGRLRLAREMKES--LSALAVRDDGRFVAVGTMFTGSVFVYIAF 291 (297)
Q Consensus 233 ~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~--v~~~~~s~dg~~l~~~~~~dg~i~vwd~~ 291 (297)
|+.|++|++||+.+++++.++.+|.. +.+++|+|||++|++|+. |++|+|||+.
T Consensus 301 ----gS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~-D~TIklWd~~ 356 (356)
T 2w18_A 301 ----ILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQK-DGNIFVYHYS 356 (356)
T ss_dssp ----EETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECT-TSCEEEEEEC
T ss_pred ----EcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEEC-CCcEEEecCC
Confidence 56699999999999999999998755 456899999999999999 9999999963
No 57
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.97 E-value=9.8e-29 Score=214.79 Aligned_cols=184 Identities=17% Similarity=0.197 Sum_probs=157.8
Q ss_pred CCCCCCCceEEEEeeCCCeEEEEecCCCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCeeeE----------------
Q psy3337 90 NSIDSKEKNLRFGFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLL---------------- 153 (297)
Q Consensus 90 ~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~---------------- 153 (297)
..+++.|+.|+++-.+++.+..+. +|...|.+++|+|++++|++++.|+.|++||+.+++.+.
T Consensus 123 l~~~~~dg~i~i~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 201 (425)
T 1r5m_A 123 IVTGVENGELRLWNKTGALLNVLN-FHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAEN 201 (425)
T ss_dssp EEEEETTSCEEEEETTSCEEEEEC-CCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC-----------
T ss_pred EEEEeCCCeEEEEeCCCCeeeecc-CCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeecc
Confidence 456788999999337788888887 999999999999999999999999999999997665433
Q ss_pred ----------------------------------------EeccccCCeeEEEEccCCCEEEEEeCCCcEEEEEcCCCce
Q psy3337 154 ----------------------------------------HIEAHSKEIDDVDFSISGEQIVSIAKDGKAFVWNSKNGSL 193 (297)
Q Consensus 154 ----------------------------------------~~~~~~~~v~~~~~sp~~~~l~s~~~d~~v~lwd~~~~~~ 193 (297)
.+..|...|.+++|+|++++|++++.|+.|++||+++++.
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 281 (425)
T 1r5m_A 202 HSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNS 281 (425)
T ss_dssp ----CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSC
T ss_pred ccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCcc
Confidence 3345778899999999999999999999999999998888
Q ss_pred eeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCCCceEEEeccCCC-eEEEEEcCCC
Q psy3337 194 SKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSGRLRLAREMKES-LSALAVRDDG 272 (297)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~-v~~~~~s~dg 272 (297)
+..+..|.. .+..++|+|++ .+++++ .|+.|++||+.+++.+..+..+.. |.+++|+|++
T Consensus 282 ~~~~~~~~~----------~i~~~~~~~~~-~l~~~~--------~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~ 342 (425)
T 1r5m_A 282 QNCFYGHSQ----------SIVSASWVGDD-KVISCS--------MDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDG 342 (425)
T ss_dssp SEEECCCSS----------CEEEEEEETTT-EEEEEE--------TTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTS
T ss_pred ceEecCCCc----------cEEEEEECCCC-EEEEEe--------CCCcEEEEECCCCcEeEecccCCccEEEEEEcCCC
Confidence 877765531 23457889999 777744 499999999999999999988766 9999999999
Q ss_pred CEEEEEecCCCeEEEEEeCCce
Q psy3337 273 RFVAVGTMFTGSVFVYIAFSLQ 294 (297)
Q Consensus 273 ~~l~~~~~~dg~i~vwd~~~~~ 294 (297)
++|++++. ||.|++||+.+++
T Consensus 343 ~~l~~~~~-dg~i~i~~~~~~~ 363 (425)
T 1r5m_A 343 QKYAVAFM-DGQVNVYDLKKLN 363 (425)
T ss_dssp SEEEEEET-TSCEEEEECHHHH
T ss_pred CEEEEEEC-CCeEEEEECCCCc
Confidence 99999999 9999999998766
No 58
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.97 E-value=1.2e-29 Score=219.26 Aligned_cols=189 Identities=15% Similarity=0.114 Sum_probs=159.5
Q ss_pred CCCCCCCceEEE-EeeCCCe-----EEEEecCC-----CCcEEEEEEe----cCCCE-EEEEcCCCcEEEEeCCC-----
Q psy3337 90 NSIDSKEKNLRF-GFKTFDS-----VQTVFAGS-----ESLQRVVRLS----RNGDL-MVTGGTDGHLRLWSFPK----- 148 (297)
Q Consensus 90 ~~~~~~d~~i~~-~~~~~~~-----~~~~~~~h-----~~~v~~~~~s----~~g~~-l~s~~~d~~i~iwd~~~----- 148 (297)
..+++.|+.|++ ++.+++. +..+. .| ...|.+++|+ |++++ |++++.|+.|++||+.+
T Consensus 84 l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 162 (397)
T 1sq9_A 84 VATTSFSGDLLFYRITREDETKKVIFEKLD-LLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADES 162 (397)
T ss_dssp EEEEETTSCEEEEEEEECTTTCCEEEEEEC-CSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHH
T ss_pred EEEEcCCCCEEEEEccCCcccccccceeec-ccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCcccccc
Confidence 556788999999 8888886 77777 77 5899999999 99999 99999999999999988
Q ss_pred -CeeeE-----Ee-------ccccCCeeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeec---cCCCCceEEEEee
Q psy3337 149 -MKPLL-----HI-------EAHSKEIDDVDFSISGEQIVSIAKDGKAFVWNSKNGSLSKELKW---NTPDNIKYLFKRC 212 (297)
Q Consensus 149 -~~~~~-----~~-------~~~~~~v~~~~~sp~~~~l~s~~~d~~v~lwd~~~~~~~~~~~~---~~~~~~~~~~~~~ 212 (297)
++.+. .+ ..|...|.+++|+|++ +|++++.|+.|++||+++++.+..+.. |.+. ..
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~-------~~ 234 (397)
T 1sq9_A 163 NSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINN-------SN 234 (397)
T ss_dssp HHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CC-------CC
T ss_pred ccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEecccccccc-------CC
Confidence 66655 66 4488899999999999 999999999999999999988888876 4100 12
Q ss_pred eeeeeeeCCCCeEEEEeccCcccccCCC---CeEEEEeCCCCceEEEecc-------------CCC-eEEEEEcCCCCEE
Q psy3337 213 RYGLVEDSPKRSRLFTLANPLAQNKRGI---SYVQQWDVDSGRLRLAREM-------------KES-LSALAVRDDGRFV 275 (297)
Q Consensus 213 ~~~~~~~s~~~~~l~~~~~~~~~~g~~d---~~i~~wd~~~~~~~~~~~~-------------~~~-v~~~~~s~dg~~l 275 (297)
.+..++|+|++.+|++.+. | +.|++||+.+++.+..+.. |.. |.+++|+|++++|
T Consensus 235 ~i~~i~~~~~~~~l~~~~~--------d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 306 (397)
T 1sq9_A 235 SIRSVKFSPQGSLLAIAHD--------SNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETL 306 (397)
T ss_dssp CEEEEEECSSTTEEEEEEE--------ETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEE
T ss_pred ccceEEECCCCCEEEEEec--------CCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEE
Confidence 2445889999999998554 8 9999999999999999887 666 9999999999999
Q ss_pred EEEecCCCeEEEEEeCCceec
Q psy3337 276 AVGTMFTGSVFVYIAFSLQMC 296 (297)
Q Consensus 276 ~~~~~~dg~i~vwd~~~~~~~ 296 (297)
++++. ||.|++||+.+++.+
T Consensus 307 ~~~~~-dg~i~iwd~~~~~~~ 326 (397)
T 1sq9_A 307 CSAGW-DGKLRFWDVKTKERI 326 (397)
T ss_dssp EEEET-TSEEEEEETTTTEEE
T ss_pred EEEeC-CCeEEEEEcCCCcee
Confidence 99999 999999999988764
No 59
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.97 E-value=7.5e-29 Score=211.57 Aligned_cols=236 Identities=12% Similarity=0.071 Sum_probs=182.7
Q ss_pred cceeeeCCCccEEEeccCCceeeEEEeeEEeeccccccccCCCCchhhhhhcccccchhhhhccCCCcccccccCCCCCC
Q psy3337 2 NCDVHSNGKNIYVVAGQENSNQLYKITAEFTQMNGVVKSKESNNTADTIVRKRKEKDKENAKQKGGKKEKSNEKGKNKKD 81 (297)
Q Consensus 2 ~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (297)
+|..|++++++|++++.|+.+++|++.......... .. .. -....
T Consensus 78 ~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~---~~---~~------v~~~~----------------------- 122 (369)
T 3zwl_B 78 WSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWK---SP---VP------VKRVE----------------------- 122 (369)
T ss_dssp EEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE---CS---SC------EEEEE-----------------------
T ss_pred EEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEee---cC---CC------eEEEE-----------------------
Confidence 456688899999999999999999986533211000 00 00 00000
Q ss_pred CCCCCCCcCCCCCCC-----ceEEE-EeeCCC-----------eEEEEecCCCC--cEEEEEEecCCCEEEEEcCCCcEE
Q psy3337 82 KIEDPPILNSIDSKE-----KNLRF-GFKTFD-----------SVQTVFAGSES--LQRVVRLSRNGDLMVTGGTDGHLR 142 (297)
Q Consensus 82 ~~~~~~~l~~~~~~d-----~~i~~-~~~~~~-----------~~~~~~~~h~~--~v~~~~~s~~g~~l~s~~~d~~i~ 142 (297)
...+... ...+..+ +.|++ ++..+. .+..+. .|.. .+.+++|+|++++|++++.|+.|+
T Consensus 123 ~~~~~~~-l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~ 200 (369)
T 3zwl_B 123 FSPCGNY-FLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKII-THEGLDAATVAGWSTKGKYIIAGHKDGKIS 200 (369)
T ss_dssp ECTTSSE-EEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEE-CCTTCCCEEEEEECGGGCEEEEEETTSEEE
T ss_pred EccCCCE-EEEecCCccCCCCEEEEEEecCCccceeecccccceeeecc-CCcCccceeEEEEcCCCCEEEEEcCCCEEE
Confidence 0000001 2233333 88998 776653 333444 5665 899999999999999999999999
Q ss_pred EEeCCC-CeeeEEeccccCCeeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCC
Q psy3337 143 LWSFPK-MKPLLHIEAHSKEIDDVDFSISGEQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSP 221 (297)
Q Consensus 143 iwd~~~-~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 221 (297)
+||+++ .+.+..+..|...|.+++|+|++++|++++.|+.|++||+++++.+..+.... .+..++|+|
T Consensus 201 i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~-----------~~~~~~~~~ 269 (369)
T 3zwl_B 201 KYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYETDC-----------PLNTAVITP 269 (369)
T ss_dssp EEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSS-----------CEEEEEECS
T ss_pred EEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeecCCC-----------CceeEEecC
Confidence 999998 78888999999999999999999999999999999999999998888776322 233477899
Q ss_pred CCeEEEEeccCcccccCCCC--------------eEEEEeCCCCceEEEeccCCC-eEEEEEcCCCCEEEEEecCCCeEE
Q psy3337 222 KRSRLFTLANPLAQNKRGIS--------------YVQQWDVDSGRLRLAREMKES-LSALAVRDDGRFVAVGTMFTGSVF 286 (297)
Q Consensus 222 ~~~~l~~~~~~~~~~g~~d~--------------~i~~wd~~~~~~~~~~~~~~~-v~~~~~s~dg~~l~~~~~~dg~i~ 286 (297)
++.++++... ++ .+++||+.+++.+..+..|.. |.+++|+|++++|++++. ||.|+
T Consensus 270 ~~~~l~~~~~--------~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~-dg~v~ 340 (369)
T 3zwl_B 270 LKEFIILGGG--------QEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGGE-DGFIR 340 (369)
T ss_dssp SSSEEEEEEC--------CC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEET-TSEEE
T ss_pred CCceEEEeec--------CCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEcC-CCeEE
Confidence 9999998654 44 899999999999999998877 999999999999999999 99999
Q ss_pred EEEeCCce
Q psy3337 287 VYIAFSLQ 294 (297)
Q Consensus 287 vwd~~~~~ 294 (297)
+|++.++.
T Consensus 341 iw~~~~~~ 348 (369)
T 3zwl_B 341 LHHFEKSY 348 (369)
T ss_dssp EEEECHHH
T ss_pred EEECcccc
Confidence 99998754
No 60
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.97 E-value=4.1e-29 Score=234.95 Aligned_cols=241 Identities=13% Similarity=0.131 Sum_probs=193.0
Q ss_pred cceeeeCCCccEEEeccCCceeeEEEeeEEeeccccccccCCCCchhhhhhcccccchhhhhccCCCcccccccCCCCCC
Q psy3337 2 NCDVHSNGKNIYVVAGQENSNQLYKITAEFTQMNGVVKSKESNNTADTIVRKRKEKDKENAKQKGGKKEKSNEKGKNKKD 81 (297)
Q Consensus 2 ~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (297)
+|..|++++.+|++++.|+.++||++........... .. +. -....-.+...
T Consensus 17 ~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~--~~-------~~--v~~~~~s~~~~----------------- 68 (814)
T 3mkq_A 17 KGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQV--TE-------TP--VRAGKFIARKN----------------- 68 (814)
T ss_dssp EEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEEC--CS-------SC--EEEEEEEGGGT-----------------
T ss_pred EEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEec--CC-------Cc--EEEEEEeCCCC-----------------
Confidence 5677999999999999999999999865332110000 00 00 00000000000
Q ss_pred CCCCCCCcCCCCCCCceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCC-eeeEEecccc
Q psy3337 82 KIEDPPILNSIDSKEKNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKM-KPLLHIEAHS 159 (297)
Q Consensus 82 ~~~~~~~l~~~~~~d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~-~~~~~~~~~~ 159 (297)
+..+++.|+.|++ +..+++.+..+. +|...|++++|+|++++|++++.|+.|++||+.++ .....+.+|.
T Consensus 69 -------~l~~~~~dg~i~vw~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~ 140 (814)
T 3mkq_A 69 -------WIIVGSDDFRIRVFNYNTGEKVVDFE-AHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHE 140 (814)
T ss_dssp -------EEEEEETTSEEEEEETTTCCEEEEEE-CCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCS
T ss_pred -------EEEEEeCCCeEEEEECCCCcEEEEEe-cCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCC
Confidence 1456778999999 899999999998 99999999999999999999999999999999876 6778888999
Q ss_pred CCeeEEEEcc-CCCEEEEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCC--CCeEEEEeccCcccc
Q psy3337 160 KEIDDVDFSI-SGEQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSP--KRSRLFTLANPLAQN 236 (297)
Q Consensus 160 ~~v~~~~~sp-~~~~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~--~~~~l~~~~~~~~~~ 236 (297)
..|.+++|+| ++..|++++.|+.|++||+.++.....+..+... .+..++|+| ++.++++.
T Consensus 141 ~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~---------~v~~~~~~~~~~~~~l~~~------- 204 (814)
T 3mkq_A 141 HFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQER---------GVNYVDYYPLPDKPYMITA------- 204 (814)
T ss_dssp SCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTT---------CCCEEEECCSTTCCEEEEE-------
T ss_pred CcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCC---------CEEEEEEEECCCCCEEEEE-------
Confidence 9999999999 8899999999999999999888777666544311 233467788 89999984
Q ss_pred cCCCCeEEEEeCCCCceEEEeccCCC-eEEEEEcCCCCEEEEEecCCCeEEEEEeCCceec
Q psy3337 237 KRGISYVQQWDVDSGRLRLAREMKES-LSALAVRDDGRFVAVGTMFTGSVFVYIAFSLQMC 296 (297)
Q Consensus 237 g~~d~~i~~wd~~~~~~~~~~~~~~~-v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~~~~~ 296 (297)
+.|+.|++||+.+++.+..+..|.. |.+++|+|++.+|++++. ||.|++||+.+++.+
T Consensus 205 -~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~v~vwd~~~~~~~ 263 (814)
T 3mkq_A 205 -SDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSE-DGTLKIWNSSTYKVE 263 (814)
T ss_dssp -CTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEET-TSCEEEEETTTCSEE
T ss_pred -eCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeC-CCeEEEEECCCCcEE
Confidence 4599999999999999999988776 999999999999999999 999999999887653
No 61
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.97 E-value=1.1e-28 Score=214.35 Aligned_cols=187 Identities=12% Similarity=0.169 Sum_probs=162.9
Q ss_pred CCCCCCCceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCEEEEEcCCCcEEEEeCC-CCeeeEEeccccCCeeEEEE
Q psy3337 90 NSIDSKEKNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFP-KMKPLLHIEAHSKEIDDVDF 167 (297)
Q Consensus 90 ~~~~~~d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~-~~~~~~~~~~~~~~v~~~~~ 167 (297)
..+++.|+.|++ ++.+++.+..+. +|...|.+++|+ +++|++|+.|+.|++||++ ....+..+.+|...|.+++|
T Consensus 149 l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~ 225 (401)
T 4aez_A 149 LSVGLGNGLVDIYDVESQTKLRTMA-GHQARVGCLSWN--RHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAW 225 (401)
T ss_dssp EEEEETTSCEEEEETTTCCEEEEEC-CCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEE
T ss_pred EEEECCCCeEEEEECcCCeEEEEec-CCCCceEEEEEC--CCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEE
Confidence 456788999999 899999999988 999999999994 5799999999999999998 56678889999999999999
Q ss_pred ccCCCEEEEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEe
Q psy3337 168 SISGEQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWD 247 (297)
Q Consensus 168 sp~~~~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd 247 (297)
+|++++|++++.|+.|++||+++++.+..+..|.. .+..++|+|++..+++.+. |+.|+.|++||
T Consensus 226 ~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~----------~v~~~~~~p~~~~ll~~~~-----gs~d~~i~i~d 290 (401)
T 4aez_A 226 RSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNA----------AVKAVAWCPWQSNLLATGG-----GTMDKQIHFWN 290 (401)
T ss_dssp CTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSS----------CCCEEEECTTSTTEEEEEC-----CTTTCEEEEEE
T ss_pred cCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcc----------eEEEEEECCCCCCEEEEec-----CCCCCEEEEEE
Confidence 99999999999999999999999888887766542 2345789998876666543 55799999999
Q ss_pred CCCCceEEEeccCCCeEEEEEcCCCCEEEE--EecCCCeEEEEEeCCcee
Q psy3337 248 VDSGRLRLAREMKESLSALAVRDDGRFVAV--GTMFTGSVFVYIAFSLQM 295 (297)
Q Consensus 248 ~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~--~~~~dg~i~vwd~~~~~~ 295 (297)
+.+++++..+..+..|.+++|+|++++|++ |+. ||.|++||+.+++.
T Consensus 291 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~-dg~i~v~~~~~~~~ 339 (401)
T 4aez_A 291 AATGARVNTVDAGSQVTSLIWSPHSKEIMSTHGFP-DNNLSIWSYSSSGL 339 (401)
T ss_dssp TTTCCEEEEEECSSCEEEEEECSSSSEEEEEECTT-TCEEEEEEEETTEE
T ss_pred CCCCCEEEEEeCCCcEEEEEECCCCCeEEEEeecC-CCcEEEEecCCccc
Confidence 999999999987777999999999999999 448 99999999988543
No 62
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.6e-29 Score=219.70 Aligned_cols=242 Identities=10% Similarity=0.117 Sum_probs=186.0
Q ss_pred cceeeeCCCccEEEeccCCceeeEEEeeEEeeccccccccCCCCchhhhhhcccccchhhhhccCCCcccccccCCCCCC
Q psy3337 2 NCDVHSNGKNIYVVAGQENSNQLYKITAEFTQMNGVVKSKESNNTADTIVRKRKEKDKENAKQKGGKKEKSNEKGKNKKD 81 (297)
Q Consensus 2 ~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (297)
+|..|++++++|++|+.|+.++||++........ .. ....+ +..+..
T Consensus 71 ~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~-~~-------~~~~~-------------------------h~~~v~ 117 (416)
T 2pm9_A 71 NDLDWSHNNKIIAGALDNGSLELYSTNEANNAIN-SM-------ARFSN-------------------------HSSSVK 117 (416)
T ss_dssp EEEEECSSSSCEEEEESSSCEEEECCSSTTSCCC-EE-------EECCC-------------------------SSSCCC
T ss_pred EEEEECCCCCeEEEEccCCeEEEeeccccccccc-ch-------hhccC-------------------------CccceE
Confidence 4667899999999999999999999875110000 00 00000 000000
Q ss_pred ---CCCCCCCcCCCCCCCceEEE-EeeCCC------eEEEE--ecCCCCcEEEEEEecC-CCEEEEEcCCCcEEEEeCCC
Q psy3337 82 ---KIEDPPILNSIDSKEKNLRF-GFKTFD------SVQTV--FAGSESLQRVVRLSRN-GDLMVTGGTDGHLRLWSFPK 148 (297)
Q Consensus 82 ---~~~~~~~l~~~~~~d~~i~~-~~~~~~------~~~~~--~~~h~~~v~~~~~s~~-g~~l~s~~~d~~i~iwd~~~ 148 (297)
...+..-+..+++.|+.|++ ++.+++ ....+ ..+|...|.+++|+|+ +.+|++++.|+.|++||+++
T Consensus 118 ~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~ 197 (416)
T 2pm9_A 118 TVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKA 197 (416)
T ss_dssp EEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTT
T ss_pred EEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCC
Confidence 00011123557888999999 888776 33332 1379999999999999 78999999999999999999
Q ss_pred CeeeEEeccc------cCCeeEEEEccCC-CEEEEEeCCC---cEEEEEcCCC-ceeeeee-ccCCCCceEEEEeeeeee
Q psy3337 149 MKPLLHIEAH------SKEIDDVDFSISG-EQIVSIAKDG---KAFVWNSKNG-SLSKELK-WNTPDNIKYLFKRCRYGL 216 (297)
Q Consensus 149 ~~~~~~~~~~------~~~v~~~~~sp~~-~~l~s~~~d~---~v~lwd~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~ 216 (297)
++.+..+..| ...|.+++|+|++ .+|++++.|+ .|++||++++ ..+..+. .|. ..+..
T Consensus 198 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~----------~~v~~ 267 (416)
T 2pm9_A 198 KKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQ----------KGILS 267 (416)
T ss_dssp TEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCS----------SCEEE
T ss_pred CCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCcc----------CceeE
Confidence 9988888876 7889999999997 6899999998 9999999986 5556565 443 12345
Q ss_pred eeeCC-CCeEEEEeccCcccccCCCCeEEEEeCCCCceEEEeccCCC-eEEEEEcCCC-CEEEEEecCCCeEEEEEeCCc
Q psy3337 217 VEDSP-KRSRLFTLANPLAQNKRGISYVQQWDVDSGRLRLAREMKES-LSALAVRDDG-RFVAVGTMFTGSVFVYIAFSL 293 (297)
Q Consensus 217 ~~~s~-~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~-v~~~~~s~dg-~~l~~~~~~dg~i~vwd~~~~ 293 (297)
++|+| ++.+|++.+ .|+.|++||+.+++++..+..|.. |.+++|+|++ .+|++++. |+.|++||+.++
T Consensus 268 ~~~s~~~~~~l~s~~--------~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~-d~~i~iw~~~~~ 338 (416)
T 2pm9_A 268 LDWCHQDEHLLLSSG--------RDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASF-DNKIEVQTLQNL 338 (416)
T ss_dssp EEECSSCSSCEEEEE--------SSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCS-SSEEEEEESCCC
T ss_pred EEeCCCCCCeEEEEe--------CCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEec-CCcEEEEEccCC
Confidence 88999 899999854 499999999999999999988877 9999999999 89999999 999999999876
Q ss_pred ee
Q psy3337 294 QM 295 (297)
Q Consensus 294 ~~ 295 (297)
+.
T Consensus 339 ~~ 340 (416)
T 2pm9_A 339 TN 340 (416)
T ss_dssp CC
T ss_pred CC
Confidence 53
No 63
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.97 E-value=2.5e-29 Score=218.93 Aligned_cols=236 Identities=12% Similarity=0.158 Sum_probs=177.6
Q ss_pred ceeeeCCCccEEEeccCCceeeEEEeeEEeeccccccccCCCCchhhhhhcccccchhhhhccCCCcccccccCCCCCCC
Q psy3337 3 CDVHSNGKNIYVVAGQENSNQLYKITAEFTQMNGVVKSKESNNTADTIVRKRKEKDKENAKQKGGKKEKSNEKGKNKKDK 82 (297)
Q Consensus 3 ~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (297)
++.+++++++|++|+.|+.++||++......... .++...-..- .
T Consensus 102 ~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~------------~~h~~~v~~~-----------------------~ 146 (420)
T 3vl1_A 102 VDTAKLQMRRFILGTTEGDIKVLDSNFNLQREID------------QAHVSEITKL-----------------------K 146 (420)
T ss_dssp EEEECSSSCEEEEEETTSCEEEECTTSCEEEEET------------TSSSSCEEEE-----------------------E
T ss_pred EEEEecCCCEEEEEECCCCEEEEeCCCcceeeec------------ccccCccEEE-----------------------E
Confidence 3457889999999999999999997654322100 0000000000 0
Q ss_pred CCCCCCcCCCCCCCceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCeeeEEeccc---
Q psy3337 83 IEDPPILNSIDSKEKNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAH--- 158 (297)
Q Consensus 83 ~~~~~~l~~~~~~d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~--- 158 (297)
..+..-+..+++.|++|++ ++.+++.+..+. +|...|.+++|+|++++|++++.|+.|++||+++++.+..+..|
T Consensus 147 ~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~ 225 (420)
T 3vl1_A 147 FFPSGEALISSSQDMQLKIWSVKDGSNPRTLI-GHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENP 225 (420)
T ss_dssp ECTTSSEEEEEETTSEEEEEETTTCCCCEEEE-CCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBT
T ss_pred ECCCCCEEEEEeCCCeEEEEeCCCCcCceEEc-CCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCC
Confidence 0000112557889999999 999999998888 99999999999999999999999999999999999988888753
Q ss_pred c---------------------CCeeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeee
Q psy3337 159 S---------------------KEIDDVDFSISGEQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLV 217 (297)
Q Consensus 159 ~---------------------~~v~~~~~sp~~~~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (297)
. ..+.+++|+|++++|++++.|+.|++||+++++.+..+..... ..+..+
T Consensus 226 ~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~---------~~v~~~ 296 (420)
T 3vl1_A 226 HDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFT---------CSCNSL 296 (420)
T ss_dssp TCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTS---------SCEEEE
T ss_pred CCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccC---------CCceeE
Confidence 3 3444555678999999999999999999999887766643211 124458
Q ss_pred eeCCCCe-EEEEeccCcccccCCCCeEEEEeCCCCce-EEEecc-CCC-eEEEEEcCCCCEEEEEecCCCeEEEEEeCCc
Q psy3337 218 EDSPKRS-RLFTLANPLAQNKRGISYVQQWDVDSGRL-RLAREM-KES-LSALAVRDDGRFVAVGTMFTGSVFVYIAFSL 293 (297)
Q Consensus 218 ~~s~~~~-~l~~~~~~~~~~g~~d~~i~~wd~~~~~~-~~~~~~-~~~-v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~~ 293 (297)
+|+|++. +|++ |+.|+.|++||+++++. +..+.. +.. |.++.+ +++++|++++. |+.|++||+...
T Consensus 297 ~~~~~~~~~l~~--------g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l~s~~~-d~~v~iw~~~~~ 366 (420)
T 3vl1_A 297 TVDGNNANYIYA--------GYENGMLAQWDLRSPECPVGEFLINEGTPINNVYF-AAGALFVSSGF-DTSIKLDIISDP 366 (420)
T ss_dssp EECSSCTTEEEE--------EETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEE-ETTEEEEEETT-TEEEEEEEECCT
T ss_pred EEeCCCCCEEEE--------EeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEe-CCCCEEEEecC-CccEEEEeccCC
Confidence 8999998 8888 44599999999998643 566665 444 777754 57899999999 999999998763
No 64
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.97 E-value=6.2e-29 Score=212.74 Aligned_cols=241 Identities=14% Similarity=0.120 Sum_probs=181.2
Q ss_pred cceeeeCCCccEEEeccCCceeeEEEeeEEeeccccccccCCCCchhhhhhcccccchhhhhccCCCcccccccCCCCCC
Q psy3337 2 NCDVHSNGKNIYVVAGQENSNQLYKITAEFTQMNGVVKSKESNNTADTIVRKRKEKDKENAKQKGGKKEKSNEKGKNKKD 81 (297)
Q Consensus 2 ~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (297)
+|..|++++++|++++.|+.+++|++............... .. -....-
T Consensus 56 ~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~---~~------v~~~~~---------------------- 104 (372)
T 1k8k_C 56 TGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRIN---RA------ARCVRW---------------------- 104 (372)
T ss_dssp EEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCS---SC------EEEEEE----------------------
T ss_pred cEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCC---Cc------eeEEEE----------------------
Confidence 46668899999999999999999999654321100000000 00 000000
Q ss_pred CCCCCCCcCCCCCCCceEEE-EeeCCCe---EEEEecCCCCcEEEEEEecCCCEEEEEcCCCcEEEEeC-----------
Q psy3337 82 KIEDPPILNSIDSKEKNLRF-GFKTFDS---VQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSF----------- 146 (297)
Q Consensus 82 ~~~~~~~l~~~~~~d~~i~~-~~~~~~~---~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~----------- 146 (297)
..+ .-...+++.|+.|++ ++..+.. ...+..+|...|.+++|+|++++|++++.|+.|++||+
T Consensus 105 -~~~-~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~ 182 (372)
T 1k8k_C 105 -APN-EKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAP 182 (372)
T ss_dssp -CTT-SSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCC
T ss_pred -CCC-CCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccc
Confidence 000 011456778999999 8888763 34443478999999999999999999999999999995
Q ss_pred -------CCCeeeEEeccccCCeeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeee
Q psy3337 147 -------PKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVED 219 (297)
Q Consensus 147 -------~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (297)
..++.+..+..|...|.+++|+|++++|++++.|+.|++||+++++.+..+..|.. .+..++|
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~----------~v~~~~~ 252 (372)
T 1k8k_C 183 TPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETL----------PLLAVTF 252 (372)
T ss_dssp BTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSSC----------CEEEEEE
T ss_pred cccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEccCCC----------CeEEEEE
Confidence 36778888999999999999999999999999999999999999999888876641 2345788
Q ss_pred CCCCeEEEEeccCcccccCCCCeEEEEeCCC--Cce--------------------------------E------EEe-c
Q psy3337 220 SPKRSRLFTLANPLAQNKRGISYVQQWDVDS--GRL--------------------------------R------LAR-E 258 (297)
Q Consensus 220 s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~--~~~--------------------------------~------~~~-~ 258 (297)
+|++.++++. .|+.|++|++.. ++. . ..+ .
T Consensus 253 ~~~~~~l~~~---------~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (372)
T 1k8k_C 253 ITESSLVAAG---------HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDS 323 (372)
T ss_dssp EETTEEEEEE---------TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCSS
T ss_pred ecCCCEEEEE---------eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCccccccccc
Confidence 9999988774 389999999987 421 0 222 3
Q ss_pred cCCC-eEEEEEc-CCC---CEEEEEecCCCeEEEEEeCCcee
Q psy3337 259 MKES-LSALAVR-DDG---RFVAVGTMFTGSVFVYIAFSLQM 295 (297)
Q Consensus 259 ~~~~-v~~~~~s-~dg---~~l~~~~~~dg~i~vwd~~~~~~ 295 (297)
+|.. |.+++|+ ++| .+|++|+. ||.|++||+.+++.
T Consensus 324 ~h~~~v~~~~~~~~~g~~~~~l~s~~~-Dg~i~~W~~~~~~~ 364 (372)
T 1k8k_C 324 LHKNSVSQISVLSGGKAKCSQFCTTGM-DGGMSIWDVRSLES 364 (372)
T ss_dssp SSSSCEEEEEEEESTTTSCSEEEEEET-TSEEEEEEHHHHHH
T ss_pred cccCCcceeEEecCCCcceeeEEEecC-CCceEEEEecChhH
Confidence 5665 9999976 677 99999999 99999999987654
No 65
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.4e-28 Score=204.12 Aligned_cols=234 Identities=12% Similarity=0.125 Sum_probs=182.1
Q ss_pred cceeeeCCCccEEEeccCCceeeEEEeeEEeeccccccccCCCCchhhhhhcccccchhhhhccCCCcccccccCCCCCC
Q psy3337 2 NCDVHSNGKNIYVVAGQENSNQLYKITAEFTQMNGVVKSKESNNTADTIVRKRKEKDKENAKQKGGKKEKSNEKGKNKKD 81 (297)
Q Consensus 2 ~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (297)
+|..|++++++|++++.|+.+++|++........... ..++. .+..
T Consensus 63 ~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~---------~~~~~-------------------------~~i~ 108 (313)
T 3odt_A 63 NSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYT---------LIGHQ-------------------------GNVC 108 (313)
T ss_dssp EEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CE---------ECCCS-------------------------SCEE
T ss_pred EEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccc---------hhhcc-------------------------cCEE
Confidence 4566899999999999999999999865321100000 00000 0000
Q ss_pred CCCCCCCcCCCCCCCceEEE-EeeCCCeEEEEecCCCCcEEEEEEec-CCCEEEEEcCCCcEEEEeCCCCeeeEEecc-c
Q psy3337 82 KIEDPPILNSIDSKEKNLRF-GFKTFDSVQTVFAGSESLQRVVRLSR-NGDLMVTGGTDGHLRLWSFPKMKPLLHIEA-H 158 (297)
Q Consensus 82 ~~~~~~~l~~~~~~d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~-~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~-~ 158 (297)
.....+-+..+++.|+.|++ + .++.+..+. .|...|.++.|+| ++++|++++.|+.|++|| ..+....+.. |
T Consensus 109 ~~~~~~~~l~~~~~d~~i~~~d--~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~ 183 (313)
T 3odt_A 109 SLSFQDGVVISGSWDKTAKVWK--EGSLVYNLQ-AHNASVWDAKVVSFSENKFLTASADKTIKLWQ--NDKVIKTFSGIH 183 (313)
T ss_dssp EEEEETTEEEEEETTSEEEEEE--TTEEEEEEE-CCSSCEEEEEEEETTTTEEEEEETTSCEEEEE--TTEEEEEECSSC
T ss_pred EEEecCCEEEEEeCCCCEEEEc--CCcEEEecc-cCCCceeEEEEccCCCCEEEEEECCCCEEEEe--cCceEEEEeccC
Confidence 00000112557888999999 6 667777777 9999999999999 899999999999999999 4566677776 8
Q ss_pred cCCeeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccC
Q psy3337 159 SKEIDDVDFSISGEQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKR 238 (297)
Q Consensus 159 ~~~v~~~~~sp~~~~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~ 238 (297)
...|.+++|+|++. |++++.|+.|++||+++++.+..+..|.. .+..++|+|++ .+++ ++
T Consensus 184 ~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~----------~i~~~~~~~~~-~l~~--------~~ 243 (313)
T 3odt_A 184 NDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHES----------FVYCIKLLPNG-DIVS--------CG 243 (313)
T ss_dssp SSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSS----------CEEEEEECTTS-CEEE--------EE
T ss_pred cccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCc----------eEEEEEEecCC-CEEE--------Ee
Confidence 99999999999988 99999999999999999999888876642 23457899999 5776 44
Q ss_pred CCCeEEEEeCCCCceEEEeccCCC-eEEEEEcCCCCEEEEEecCCCeEEEEEeCCceec
Q psy3337 239 GISYVQQWDVDSGRLRLAREMKES-LSALAVRDDGRFVAVGTMFTGSVFVYIAFSLQMC 296 (297)
Q Consensus 239 ~d~~i~~wd~~~~~~~~~~~~~~~-v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~~~~~ 296 (297)
.|+.|++||+.+++++..+..+.. |.+++|+|+++ +++++. ||.|++||+.+++.+
T Consensus 244 ~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~-dg~i~iw~~~~~~~~ 300 (313)
T 3odt_A 244 EDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGD-IIVGSS-DNLVRIFSQEKSRWA 300 (313)
T ss_dssp TTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSC-EEEEET-TSCEEEEESCGGGCC
T ss_pred cCCEEEEEECCCCceeEEEeccCceEEEEEEccCCC-EEEEeC-CCcEEEEeCCCCcee
Confidence 599999999999999999988875 99999999998 556888 999999999987654
No 66
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.5e-29 Score=221.78 Aligned_cols=259 Identities=9% Similarity=0.080 Sum_probs=183.9
Q ss_pred cceeeeCCCccEEEeccCCceeeEEEeeEEeeccccccccCCCCchhhhhhcccccchhhhhccCCCcccccccCCCCCC
Q psy3337 2 NCDVHSNGKNIYVVAGQENSNQLYKITAEFTQMNGVVKSKESNNTADTIVRKRKEKDKENAKQKGGKKEKSNEKGKNKKD 81 (297)
Q Consensus 2 ~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (297)
+|+.|++++++|++|+.|+.++||++........... ..+. .-+.....+.... ..... -..
T Consensus 115 ~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~---------~~~~-~i~~~~~~~~~~~----~~~~~----~~~ 176 (437)
T 3gre_A 115 TQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKF---------LNCE-CIRKINLKNFGKN----EYAVR----MRA 176 (437)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEE---------EEEE-EEEEEEGGGGSSC----CCEEE----EEE
T ss_pred EEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeec---------cccc-eeEEEEccCcccc----cCceE----EEE
Confidence 4667888999999999999999999964321100000 0000 0000000000000 00000 000
Q ss_pred CCCCCCCcCCCCCCCceEEE-EeeCCCeEEEEecC--CCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCeeeEEec-c
Q psy3337 82 KIEDPPILNSIDSKEKNLRF-GFKTFDSVQTVFAG--SESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIE-A 157 (297)
Q Consensus 82 ~~~~~~~l~~~~~~d~~i~~-~~~~~~~~~~~~~~--h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~-~ 157 (297)
......-+..+++.|+.|++ ++.+++.+..+. + |...|++++|+|++++|++|+.|+.|++||+++++++..+. .
T Consensus 177 ~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~-~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 255 (437)
T 3gre_A 177 FVNEEKSLLVALTNLSRVIIFDIRTLERLQIIE-NSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFG 255 (437)
T ss_dssp EECSSCEEEEEEETTSEEEEEETTTCCEEEEEE-CCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCT
T ss_pred EEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEc-cCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecC
Confidence 00001112457888999999 999999999998 6 89999999999999999999999999999999999988886 7
Q ss_pred ccCCeeEEEEcc----CCCEEEEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEE----------------Eeeeeeee
Q psy3337 158 HSKEIDDVDFSI----SGEQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLF----------------KRCRYGLV 217 (297)
Q Consensus 158 ~~~~v~~~~~sp----~~~~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~ 217 (297)
|...|.+++|+| ++.+|++++.|+.|++||+++++.+..+..|........+ ....+..+
T Consensus 256 ~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l 335 (437)
T 3gre_A 256 DHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTI 335 (437)
T ss_dssp TCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCE
T ss_pred CCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEE
Confidence 888999996665 6779999999999999999999988888766411100000 12234567
Q ss_pred eeCCCCeEEEEeccCcccccCCCCeEEEEeCCCCceEEEecc-------------------------------------C
Q psy3337 218 EDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSGRLRLAREM-------------------------------------K 260 (297)
Q Consensus 218 ~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~-------------------------------------~ 260 (297)
+|+ ++.+|+++ +.|+.|++||+.+++....+.+ |
T Consensus 336 ~~~-~~~~l~s~--------~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h 406 (437)
T 3gre_A 336 SVS-NDKILLTD--------EATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYH 406 (437)
T ss_dssp EEE-TTEEEEEE--------GGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------
T ss_pred EEC-CceEEEec--------CCCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCccccc
Confidence 788 77888884 4599999999999887666654 4
Q ss_pred CC-eEEEEEcCC--CCEEEEEecCCCeEEEEE
Q psy3337 261 ES-LSALAVRDD--GRFVAVGTMFTGSVFVYI 289 (297)
Q Consensus 261 ~~-v~~~~~s~d--g~~l~~~~~~dg~i~vwd 289 (297)
.. |.+++|+++ +.+|++|+. ||.|+||+
T Consensus 407 ~~~I~~i~~~~~~~~~~l~s~~~-dG~I~iw~ 437 (437)
T 3gre_A 407 HDIINSISTCEVDETPLLVACDN-SGLIGIFQ 437 (437)
T ss_dssp CCCEEEEEEEESSSSEEEEEEET-TSCEEEEC
T ss_pred ccceeeEeeeccCCceEEEEEcC-CceEEEeC
Confidence 44 999999998 789999999 99999994
No 67
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.97 E-value=5.8e-29 Score=215.23 Aligned_cols=247 Identities=12% Similarity=0.166 Sum_probs=176.9
Q ss_pred cceeeeC-CCccEEEeccCCceeeEEEeeEEeeccccccccCCCCchhhhhhcccccchhhhhccCCCcccccccCCCCC
Q psy3337 2 NCDVHSN-GKNIYVVAGQENSNQLYKITAEFTQMNGVVKSKESNNTADTIVRKRKEKDKENAKQKGGKKEKSNEKGKNKK 80 (297)
Q Consensus 2 ~~~~~~~-~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (297)
+|..|++ ++++|++++.|+.+++|++............... ... .-.
T Consensus 103 ~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~------------~~~------------------~~~-- 150 (408)
T 4a11_B 103 ETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNFEETV------------YSH------------------HMS-- 150 (408)
T ss_dssp EEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEECSSCE------------EEE------------------EEC--
T ss_pred EEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceeccCCCce------------eee------------------Eee--
Confidence 3455777 7789999999999999998654322100000000 000 000
Q ss_pred CCCCCCCCcCCCCCCCceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCC-EEEEEcCCCcEEEEeCCCCe-eeEEe--
Q psy3337 81 DKIEDPPILNSIDSKEKNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGD-LMVTGGTDGHLRLWSFPKMK-PLLHI-- 155 (297)
Q Consensus 81 ~~~~~~~~l~~~~~~d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~-~l~s~~~d~~i~iwd~~~~~-~~~~~-- 155 (297)
.......+..+++.|+.|++ ++.+++.+..+. +|...|.+++|+|+++ +|++|+.|+.|++||++++. .+..+
T Consensus 151 -~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~-~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~ 228 (408)
T 4a11_B 151 -PVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQ-GHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQ 228 (408)
T ss_dssp -SSCSSCCEEEEEESSSSEEEEESSSSCCCEEEC-CCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCT
T ss_pred -cCCCCCcEEEEEcCCCeEEEEeCCCcceeeeec-CCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccc
Confidence 00000112457788999999 999999888888 9999999999999998 58999999999999998765 34444
Q ss_pred -------------ccccCCeeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCC
Q psy3337 156 -------------EAHSKEIDDVDFSISGEQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPK 222 (297)
Q Consensus 156 -------------~~~~~~v~~~~~sp~~~~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 222 (297)
..|...|.+++|+|++++|++++.|+.|++||+.+++....+..+....... ..........
T Consensus 229 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 303 (408)
T 4a11_B 229 HNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKK-----GLKFTVSCGC 303 (408)
T ss_dssp TTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSS-----CCCCEECCSS
T ss_pred cccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccc-----cceeEEecCC
Confidence 5788999999999999999999999999999999887665544332110000 0000111222
Q ss_pred CeEEEEeccCcccccCCCCeEEEEeCCCCceEEEeccCCC-eEEEEEcCCCCEEEEEecCCCeEEEEEeCCceec
Q psy3337 223 RSRLFTLANPLAQNKRGISYVQQWDVDSGRLRLAREMKES-LSALAVRDDGRFVAVGTMFTGSVFVYIAFSLQMC 296 (297)
Q Consensus 223 ~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~-v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~~~~~ 296 (297)
+..+++... ++.|++||+.+++++..+.+|.. |.+++|+|++++|++++. ||.|++||+.+++++
T Consensus 304 ~~~~~~~~~--------~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~-dg~i~iw~~~~~~~~ 369 (408)
T 4a11_B 304 SSEFVFVPY--------GSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSR-DCNILAWVPSLYEPV 369 (408)
T ss_dssp SSCEEEEEE--------TTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEET-TSCEEEEEECC----
T ss_pred CceEEEEec--------CCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEECC-CCeEEEEeCCCCCcc
Confidence 334444333 89999999999999999998877 999999999999999999 999999999988765
No 68
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.97 E-value=1.6e-28 Score=213.20 Aligned_cols=189 Identities=16% Similarity=0.172 Sum_probs=159.1
Q ss_pred CCCCCCCceEEE-EeeCC-------CeEEEEecCCCCcEEEEEEecCC-CEEEEEcCCCcEEEEeCCCCeeeEEe--ccc
Q psy3337 90 NSIDSKEKNLRF-GFKTF-------DSVQTVFAGSESLQRVVRLSRNG-DLMVTGGTDGHLRLWSFPKMKPLLHI--EAH 158 (297)
Q Consensus 90 ~~~~~~d~~i~~-~~~~~-------~~~~~~~~~h~~~v~~~~~s~~g-~~l~s~~~d~~i~iwd~~~~~~~~~~--~~~ 158 (297)
..+++.|++|++ ++.++ +.+..+. +|...|.+++|+|++ ++|++++.|+.|++||+++++.+..+ ..|
T Consensus 97 l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 175 (402)
T 2aq5_A 97 IASGSEDCTVMVWEIPDGGLVLPLREPVITLE-GHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVH 175 (402)
T ss_dssp EEEEETTSEEEEEECCTTCCSSCBCSCSEEEE-CCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTC
T ss_pred EEEEeCCCeEEEEEccCCCCccccCCceEEec-CCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCC
Confidence 557889999999 88887 5677777 999999999999998 79999999999999999999999999 889
Q ss_pred cCCeeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeee-eccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCccccc
Q psy3337 159 SKEIDDVDFSISGEQIVSIAKDGKAFVWNSKNGSLSKEL-KWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNK 237 (297)
Q Consensus 159 ~~~v~~~~~sp~~~~l~s~~~d~~v~lwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g 237 (297)
...|.+++|+|++++|++++.|+.|++||+++++.+..+ ..|... .+..+.|+|++.+|++... +
T Consensus 176 ~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~l~~g~~-----~ 241 (402)
T 2aq5_A 176 PDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGT---------RPVHAVFVSEGKILTTGFS-----R 241 (402)
T ss_dssp CSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSS---------SCCEEEECSTTEEEEEEEC-----T
T ss_pred CCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCC---------cceEEEEcCCCcEEEEecc-----C
Confidence 999999999999999999999999999999999888887 455421 1234678999998888522 2
Q ss_pred CCCCeEEEEeCCCCce-E--EEeccCCCeEEEEEcCCCCEEEE-EecCCCeEEEEEeCCce
Q psy3337 238 RGISYVQQWDVDSGRL-R--LAREMKESLSALAVRDDGRFVAV-GTMFTGSVFVYIAFSLQ 294 (297)
Q Consensus 238 ~~d~~i~~wd~~~~~~-~--~~~~~~~~v~~~~~s~dg~~l~~-~~~~dg~i~vwd~~~~~ 294 (297)
+.++.|++||+++++. + ..+.....+.+++|+|++.+|++ |+. ||.|++||+.+++
T Consensus 242 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~-dg~i~i~d~~~~~ 301 (402)
T 2aq5_A 242 MSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKG-DSSIRYFEITSEA 301 (402)
T ss_dssp TCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETT-CSCEEEEEECSST
T ss_pred CCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcC-CCeEEEEEecCCC
Confidence 5699999999998653 2 33334455999999999999864 557 9999999999876
No 69
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.4e-29 Score=218.60 Aligned_cols=193 Identities=16% Similarity=0.267 Sum_probs=157.8
Q ss_pred CCCCCCCceEEE-EeeC----CCeEEEEecCCCCcEEEEEEecC-CCEEEEEcCCCcEEEEeCCCCe------eeE---E
Q psy3337 90 NSIDSKEKNLRF-GFKT----FDSVQTVFAGSESLQRVVRLSRN-GDLMVTGGTDGHLRLWSFPKMK------PLL---H 154 (297)
Q Consensus 90 ~~~~~~d~~i~~-~~~~----~~~~~~~~~~h~~~v~~~~~s~~-g~~l~s~~~d~~i~iwd~~~~~------~~~---~ 154 (297)
..+++.|+.|++ ++.+ .+.+..+. +|...|++++|+|+ +++|++++.|+.|++||+.+++ ... .
T Consensus 82 l~~~~~dg~v~vw~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~ 160 (416)
T 2pm9_A 82 IAGALDNGSLELYSTNEANNAINSMARFS-NHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQ 160 (416)
T ss_dssp EEEEESSSCEEEECCSSTTSCCCEEEECC-CSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCC
T ss_pred EEEEccCCeEEEeecccccccccchhhcc-CCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCcccccccccccccc
Confidence 456788999999 7776 34667776 99999999999998 8999999999999999998876 332 3
Q ss_pred eccccCCeeEEEEccC-CCEEEEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCC-eEEEEeccC
Q psy3337 155 IEAHSKEIDDVDFSIS-GEQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKR-SRLFTLANP 232 (297)
Q Consensus 155 ~~~~~~~v~~~~~sp~-~~~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~-~~l~~~~~~ 232 (297)
+..|...|.+++|+|+ +.+|++++.|+.|++||+++++.+..+..+.+.. -....+..++|+|++ .++++.+
T Consensus 161 ~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~~l~~~~-- 234 (416)
T 2pm9_A 161 SMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNS----GIKQQLSVVEWHPKNSTRVATAT-- 234 (416)
T ss_dssp SCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSS----CCCCCEEEEEECSSCTTEEEEEE--
T ss_pred ccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEecccccc----ccCCceEEEEECCCCCCEEEEEE--
Confidence 4678999999999998 7899999999999999999998888876653110 001234458899997 5677744
Q ss_pred cccccCCCC---eEEEEeCCCC-ceEEEec-cCCC-eEEEEEcC-CCCEEEEEecCCCeEEEEEeCCceec
Q psy3337 233 LAQNKRGIS---YVQQWDVDSG-RLRLARE-MKES-LSALAVRD-DGRFVAVGTMFTGSVFVYIAFSLQMC 296 (297)
Q Consensus 233 ~~~~g~~d~---~i~~wd~~~~-~~~~~~~-~~~~-v~~~~~s~-dg~~l~~~~~~dg~i~vwd~~~~~~~ 296 (297)
.++ .|++||++++ +++..+. .|.. |.+++|+| ++.+|++++. ||.|++||+.+++++
T Consensus 235 ------~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~-dg~v~~wd~~~~~~~ 298 (416)
T 2pm9_A 235 ------GSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGR-DNTVLLWNPESAEQL 298 (416)
T ss_dssp ------CCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEES-SSEEEEECSSSCCEE
T ss_pred ------CCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeC-CCCEEEeeCCCCccc
Confidence 477 9999999986 6667777 6666 99999999 9999999999 999999999988764
No 70
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.97 E-value=4.3e-29 Score=218.90 Aligned_cols=243 Identities=10% Similarity=0.120 Sum_probs=178.9
Q ss_pred cceeeeC-CCccEEEeccCCceeeEEEeeEEeeccccccccCCCCchhhhhhcccccchhhhhccCCCcccccccCCCCC
Q psy3337 2 NCDVHSN-GKNIYVVAGQENSNQLYKITAEFTQMNGVVKSKESNNTADTIVRKRKEKDKENAKQKGGKKEKSNEKGKNKK 80 (297)
Q Consensus 2 ~~~~~~~-~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (297)
+|..|++ ++.+|++|+.|+.++||++....... . . +. ..... +..+.
T Consensus 67 ~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~---~---~---~~------~~~~~-----------------h~~~v 114 (437)
T 3gre_A 67 TSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGE---V---Y---SS------SLTYD-----------------CSSTV 114 (437)
T ss_dssp EEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTC---C---C---SC------SEEEE-----------------CSSCE
T ss_pred EEEEECCCCCCEEEEecCCceEEEeECcccccCc---c---c---ce------eeecc-----------------CCCCE
Confidence 5677888 89999999999999999986521000 0 0 00 00000 00000
Q ss_pred C--CCCCCCCcCCCCCCCceEEE-Eee---CCCeEEEEe---------cC--CCCcEEEEE--EecCCCEEEEEcCCCcE
Q psy3337 81 D--KIEDPPILNSIDSKEKNLRF-GFK---TFDSVQTVF---------AG--SESLQRVVR--LSRNGDLMVTGGTDGHL 141 (297)
Q Consensus 81 ~--~~~~~~~l~~~~~~d~~i~~-~~~---~~~~~~~~~---------~~--h~~~v~~~~--~s~~g~~l~s~~~d~~i 141 (297)
. ...+..-+..+++.|++|++ ++. +++....+. .. +...+.++. +++++++|++|+.|+.|
T Consensus 115 ~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i 194 (437)
T 3gre_A 115 TQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRV 194 (437)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEE
T ss_pred EEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeE
Confidence 0 00001112457889999999 774 665554433 01 455666776 55789999999999999
Q ss_pred EEEeCCCCeeeEEecc--ccCCeeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeee-ccCCCCceEEEEeeeeeee-
Q psy3337 142 RLWSFPKMKPLLHIEA--HSKEIDDVDFSISGEQIVSIAKDGKAFVWNSKNGSLSKELK-WNTPDNIKYLFKRCRYGLV- 217 (297)
Q Consensus 142 ~iwd~~~~~~~~~~~~--~~~~v~~~~~sp~~~~l~s~~~d~~v~lwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~- 217 (297)
++||+++++.+..+.. |...|++++|+|++++|++++.|+.|++||+++++.+..+. .+. . .+..+
T Consensus 195 ~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~----~------~v~~~~ 264 (437)
T 3gre_A 195 IIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDH----A------PITHVE 264 (437)
T ss_dssp EEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTC----E------EEEEEE
T ss_pred EEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCC----C------ceEEEE
Confidence 9999999999999988 89999999999999999999999999999999998888775 332 1 12234
Q ss_pred ---eeCCCCeEEEEeccCcccccCCCCeEEEEeCCCCceEEEeccC--------------------------CC-eEEEE
Q psy3337 218 ---EDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSGRLRLAREMK--------------------------ES-LSALA 267 (297)
Q Consensus 218 ---~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~--------------------------~~-v~~~~ 267 (297)
.|+|++.+|++ |+.|+.|++||+++++++..+..+ .. |.+++
T Consensus 265 ~~~~~s~~~~~l~s--------~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~ 336 (437)
T 3gre_A 265 VCQFYGKNSVIVVG--------GSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTIS 336 (437)
T ss_dssp ECTTTCTTEEEEEE--------ESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEE
T ss_pred eccccCCCccEEEE--------EcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEE
Confidence 45678888888 555999999999999988777643 22 88899
Q ss_pred EcCCCCEEEEEecCCCeEEEEEeCCceec
Q psy3337 268 VRDDGRFVAVGTMFTGSVFVYIAFSLQMC 296 (297)
Q Consensus 268 ~s~dg~~l~~~~~~dg~i~vwd~~~~~~~ 296 (297)
|+ ++++|++|+. |+.|++||+.+++.+
T Consensus 337 ~~-~~~~l~s~~~-d~~i~~wd~~~~~~~ 363 (437)
T 3gre_A 337 VS-NDKILLTDEA-TSSIVMFSLNELSSS 363 (437)
T ss_dssp EE-TTEEEEEEGG-GTEEEEEETTCGGGC
T ss_pred EC-CceEEEecCC-CCeEEEEECCCcccc
Confidence 99 7799999999 999999999988754
No 71
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.96 E-value=2.8e-28 Score=207.33 Aligned_cols=185 Identities=11% Similarity=0.013 Sum_probs=146.9
Q ss_pred CCCCCCCceEEE-Eee---------CCCeEEEEecCCCCcEEEEEEec--CCCEEEEEcCCCcEEEEeCCCCeeeEEec-
Q psy3337 90 NSIDSKEKNLRF-GFK---------TFDSVQTVFAGSESLQRVVRLSR--NGDLMVTGGTDGHLRLWSFPKMKPLLHIE- 156 (297)
Q Consensus 90 ~~~~~~d~~i~~-~~~---------~~~~~~~~~~~h~~~v~~~~~s~--~g~~l~s~~~d~~i~iwd~~~~~~~~~~~- 156 (297)
..+++.|++|++ +.. +++.+..+..+|...|.+++|+| ++++|++++.|+.|++||+++++.+..+.
T Consensus 88 ~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~ 167 (343)
T 3lrv_A 88 IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSA 167 (343)
T ss_dssp EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECC
T ss_pred eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEec
Confidence 457888999998 443 44545555557888999999999 99999999999999999999998876664
Q ss_pred cccCCeeEEEEccCCCEEEEEeCCCcEEEEEcCCCcee-eeeec-cCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcc
Q psy3337 157 AHSKEIDDVDFSISGEQIVSIAKDGKAFVWNSKNGSLS-KELKW-NTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLA 234 (297)
Q Consensus 157 ~~~~~v~~~~~sp~~~~l~s~~~d~~v~lwd~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~ 234 (297)
.|...|.+++|+|++.+|++|+.|+.|++||+++++.+ ..+.. |. ..+..++|+|++.+|++.+
T Consensus 168 ~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~----------~~v~~l~fs~~g~~l~s~~---- 233 (343)
T 3lrv_A 168 KSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEE----------AKIKEVKFADNGYWMVVEC---- 233 (343)
T ss_dssp CSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTT----------SCEEEEEECTTSSEEEEEE----
T ss_pred CCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCC----------CCEEEEEEeCCCCEEEEEe----
Confidence 34558999999999999999999999999999998877 66765 53 2344588999999999844
Q ss_pred cccCCCCeEEEEeCCCCceEEEecc---CCC-e--EEEEEcCCCCEEEEEecCCCeEEEEEeCCc
Q psy3337 235 QNKRGISYVQQWDVDSGRLRLAREM---KES-L--SALAVRDDGRFVAVGTMFTGSVFVYIAFSL 293 (297)
Q Consensus 235 ~~g~~d~~i~~wd~~~~~~~~~~~~---~~~-v--~~~~~s~dg~~l~~~~~~dg~i~vwd~~~~ 293 (297)
++.|++||+++++.+..+.. +.. + .+++|+|+|++|++++..|+.|++|++.+.
T Consensus 234 -----~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~ 293 (343)
T 3lrv_A 234 -----DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKK 293 (343)
T ss_dssp -----SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTT
T ss_pred -----CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEccc
Confidence 34999999999876655443 222 3 369999999999997754889999998654
No 72
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.96 E-value=6e-29 Score=211.54 Aligned_cols=191 Identities=15% Similarity=0.201 Sum_probs=149.3
Q ss_pred CCCCCCCceEEE-EeeCCC-eEEEEecCCCC----cEEEEE----EecCCCEEEEEcCCCcEEEEeCCCCeeeEEecccc
Q psy3337 90 NSIDSKEKNLRF-GFKTFD-SVQTVFAGSES----LQRVVR----LSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHS 159 (297)
Q Consensus 90 ~~~~~~d~~i~~-~~~~~~-~~~~~~~~h~~----~v~~~~----~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~ 159 (297)
..+++.|+.|++ ++.+++ .+..+. .|.. .|.+++ |+|++++|++++.|+.|++||+++++.... ..|.
T Consensus 132 l~~~~~d~~i~vwd~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~ 209 (357)
T 3i2n_A 132 IVTGSRDGTVKVWDPRQKDDPVANME-PVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWE-TNIK 209 (357)
T ss_dssp EEEEETTSCEEEECTTSCSSCSEEEC-CCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEE-EECS
T ss_pred EEEEeCCCeEEEEeCCCCCCcceecc-ccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeee-cCCC
Confidence 457888999999 888876 566665 4443 789998 788999999999999999999999887544 5688
Q ss_pred CCeeEEEEcc---CCCEEEEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCe-EEEEeccCccc
Q psy3337 160 KEIDDVDFSI---SGEQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRS-RLFTLANPLAQ 235 (297)
Q Consensus 160 ~~v~~~~~sp---~~~~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~-~l~~~~~~~~~ 235 (297)
..|.+++|+| ++.+|++++.|+.|++||+++++.+..+.... .......+..++|+|++. ++++
T Consensus 210 ~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-----~~~~~~~v~~~~~~~~~~~~l~~------- 277 (357)
T 3i2n_A 210 NGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVS-----EKAHKSTVWQVRHLPQNRELFLT------- 277 (357)
T ss_dssp SCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEE-----EECCSSCEEEEEEETTEEEEEEE-------
T ss_pred CceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeec-----cCCCcCCEEEEEECCCCCcEEEE-------
Confidence 9999999999 99999999999999999998766554443110 001112345688999998 6777
Q ss_pred ccCCCCeEEEEeCCCC-------------------ceEEEeccCCC-eEEEEEcCCCCEEE-EEecCCCeEEEEEeCCce
Q psy3337 236 NKRGISYVQQWDVDSG-------------------RLRLAREMKES-LSALAVRDDGRFVA-VGTMFTGSVFVYIAFSLQ 294 (297)
Q Consensus 236 ~g~~d~~i~~wd~~~~-------------------~~~~~~~~~~~-v~~~~~s~dg~~l~-~~~~~dg~i~vwd~~~~~ 294 (297)
|+.|+.|++||++.+ +.+..+..|.. |.+++|+|++++|+ +++. ||.|++||+.+++
T Consensus 278 -~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~-d~~i~iw~~~~~~ 355 (357)
T 3i2n_A 278 -AGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSF-DQTVRVLIVTKLN 355 (357)
T ss_dssp -EETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEET-TSEEEEEEECC--
T ss_pred -EeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecC-CCcEEEEECCCcc
Confidence 445999999999753 35667777776 99999999999998 7999 9999999999887
Q ss_pred ec
Q psy3337 295 MC 296 (297)
Q Consensus 295 ~~ 296 (297)
.|
T Consensus 356 ~i 357 (357)
T 3i2n_A 356 KI 357 (357)
T ss_dssp --
T ss_pred cC
Confidence 64
No 73
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.96 E-value=1.3e-27 Score=205.15 Aligned_cols=191 Identities=15% Similarity=0.187 Sum_probs=143.0
Q ss_pred CCCCCCceEEE-EeeCCCeE-EEEe-------cCCCCcEEEEEEecCCCEEEE--EcCCCcEEEEeCCCCeeeEEecccc
Q psy3337 91 SIDSKEKNLRF-GFKTFDSV-QTVF-------AGSESLQRVVRLSRNGDLMVT--GGTDGHLRLWSFPKMKPLLHIEAHS 159 (297)
Q Consensus 91 ~~~~~d~~i~~-~~~~~~~~-~~~~-------~~h~~~v~~~~~s~~g~~l~s--~~~d~~i~iwd~~~~~~~~~~~~~~ 159 (297)
.+++.|+.+++ +..+.... .... ..+...+.+++|||||++|++ ++.|++|+|||+++++++..+. |.
T Consensus 98 ~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~-~~ 176 (365)
T 4h5i_A 98 TQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIE-TR 176 (365)
T ss_dssp HHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEE-CS
T ss_pred EEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeC-CC
Confidence 35677889999 66654322 1111 135667999999999998764 4578999999999999988886 77
Q ss_pred CCeeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCC
Q psy3337 160 KEIDDVDFSISGEQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRG 239 (297)
Q Consensus 160 ~~v~~~~~sp~~~~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~ 239 (297)
..|.+++|+|++++|++++.+ .+.+|+..++..+.......+ ...+..++|+|++..+++++. .+..
T Consensus 177 ~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~--------~~~v~~v~fspdg~~l~~~s~----d~~~ 243 (365)
T 4h5i_A 177 GEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSCIARKTDFDK--------NWSLSKINFIADDTVLIAASL----KKGK 243 (365)
T ss_dssp SCCCEEEECTTSSEEEEECSS-CEEEEETTTCCEEEEECCCCT--------TEEEEEEEEEETTEEEEEEEE----SSSC
T ss_pred CceEEEEEccCCceEEeccce-eEEEEEeccCcceeeeecCCC--------CCCEEEEEEcCCCCEEEEEec----CCcc
Confidence 889999999999999998855 567777777766544322111 122445889999999998765 0122
Q ss_pred CCeEEEEeCCCCce----EEEeccCCC-eEEEEEcCCCCEEEEEecCCCeEEEEEeCCceec
Q psy3337 240 ISYVQQWDVDSGRL----RLAREMKES-LSALAVRDDGRFVAVGTMFTGSVFVYIAFSLQMC 296 (297)
Q Consensus 240 d~~i~~wd~~~~~~----~~~~~~~~~-v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~~~~~ 296 (297)
...+++|++..... ...+..|.. |++++|+|||++|++|+. |++|+|||+.+++++
T Consensus 244 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~-D~~V~iwd~~~~~~~ 304 (365)
T 4h5i_A 244 GIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASN-DNSIALVKLKDLSMS 304 (365)
T ss_dssp CEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEET-TSCEEEEETTTTEEE
T ss_pred eeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcC-CCEEEEEECCCCcEE
Confidence 23788999877543 334556655 999999999999999999 999999999998875
No 74
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.96 E-value=2.2e-29 Score=225.07 Aligned_cols=183 Identities=7% Similarity=-0.074 Sum_probs=145.2
Q ss_pred CCCCCCCceEEE-EeeCCC-eEEEEecCCCCcEEEE--EEecCC-CEEEEEcCCCcEEEEeCCCCeeeEEeccccC--Ce
Q psy3337 90 NSIDSKEKNLRF-GFKTFD-SVQTVFAGSESLQRVV--RLSRNG-DLMVTGGTDGHLRLWSFPKMKPLLHIEAHSK--EI 162 (297)
Q Consensus 90 ~~~~~~d~~i~~-~~~~~~-~~~~~~~~h~~~v~~~--~~s~~g-~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~--~v 162 (297)
..+++.|++|++ |+.++. ....+. +|...|+++ +|+|++ ++|++|+.|++|+|||+++++++..+.+|.. .|
T Consensus 280 lasgs~DgtV~lWD~~~~~~~~~~~~-~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v 358 (524)
T 2j04_B 280 VVCGFKNGFVAEFDLTDPEVPSFYDQ-VHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNL 358 (524)
T ss_dssp EEEEETTSEEEEEETTBCSSCSEEEE-CSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSC
T ss_pred EEEEeCCCEEEEEECCCCCCceEEee-cccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcc
Confidence 568999999999 888764 344566 999999999 578888 8999999999999999998887777777754 58
Q ss_pred eEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCe
Q psy3337 163 DDVDFSISGEQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISY 242 (297)
Q Consensus 163 ~~~~~sp~~~~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~ 242 (297)
.+++|+|++..|++++.|++|++||++++..+..+..|. ..+..++|+|+++.|++++ .|++
T Consensus 359 ~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~----------~~V~sva~Sp~g~~l~Sgs--------~Dgt 420 (524)
T 2j04_B 359 VPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRE----------TTITAIGVSRLHPMVLAGS--------ADGS 420 (524)
T ss_dssp CCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECS----------SCEEEEECCSSCCBCEEEE--------TTTE
T ss_pred cceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCC----------CceEEEEeCCCCCeEEEEE--------CCCE
Confidence 899999999999999999999999999998877777765 2344588999999998844 4777
Q ss_pred EEEEeCCC--------------------------------------------CceEEEeccCCC-eEEEEEcCCCC---E
Q psy3337 243 VQQWDVDS--------------------------------------------GRLRLAREMKES-LSALAVRDDGR---F 274 (297)
Q Consensus 243 i~~wd~~~--------------------------------------------~~~~~~~~~~~~-v~~~~~s~dg~---~ 274 (297)
|++||+.. +.++..+.+|.. |.+++|+|++. +
T Consensus 421 v~lwd~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~ 500 (524)
T 2j04_B 421 LIITNAARRLLHGIKNSSATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKC 500 (524)
T ss_dssp EECCBSCSSTTTCC------CCCCEEEECBCCSSSCEEEECCCCCCCC-------------CCCSCCCEEECCSTTTTTE
T ss_pred EEEEechHhhccccccCccceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeeecCCCceEEEEECCCCCCccHH
Confidence 77776432 112233344555 89999999954 9
Q ss_pred EEEEecCCCeEEEEEeCC
Q psy3337 275 VAVGTMFTGSVFVYIAFS 292 (297)
Q Consensus 275 l~~~~~~dg~i~vwd~~~ 292 (297)
|++|+. ||.|+||++.-
T Consensus 501 lAsg~~-~g~vrlw~l~~ 517 (524)
T 2j04_B 501 YAFSNS-AGLLTLEYLSL 517 (524)
T ss_dssp EEEECT-TSEEEEEECSC
T ss_pred HHhhcc-CceEEEEEccc
Confidence 999999 99999999864
No 75
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.96 E-value=5.8e-28 Score=201.39 Aligned_cols=184 Identities=15% Similarity=0.223 Sum_probs=151.4
Q ss_pred CCCCCCCceEEE-EeeC--CCeEEEEecCCCCcEEEEEEecC--CCEEEEEcCCCcEEEEeCCCCe--eeEEeccccCCe
Q psy3337 90 NSIDSKEKNLRF-GFKT--FDSVQTVFAGSESLQRVVRLSRN--GDLMVTGGTDGHLRLWSFPKMK--PLLHIEAHSKEI 162 (297)
Q Consensus 90 ~~~~~~d~~i~~-~~~~--~~~~~~~~~~h~~~v~~~~~s~~--g~~l~s~~~d~~i~iwd~~~~~--~~~~~~~~~~~v 162 (297)
..+++.|++|++ ++.+ .+.+.++. +|.+.|++++|+|+ +++|++|+.|++|++||+++++ .+..+..|...|
T Consensus 24 las~s~D~~v~iw~~~~~~~~~~~~l~-gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v 102 (297)
T 2pm7_B 24 MATCSSDKTIKIFEVEGETHKLIDTLT-GHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASV 102 (297)
T ss_dssp EEEEETTSCEEEEEBCSSCBCCCEEEC-CCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCE
T ss_pred EEEEeCCCEEEEEecCCCCcEEEEEEc-cccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCce
Confidence 567889999999 7764 35677777 99999999999863 8999999999999999998774 566788899999
Q ss_pred eEEEEccC--CCEEEEEeCCCcEEEEEcCCCce--eeeeeccCCCCceEEEEeeeeeeeeeCCC-------------CeE
Q psy3337 163 DDVDFSIS--GEQIVSIAKDGKAFVWNSKNGSL--SKELKWNTPDNIKYLFKRCRYGLVEDSPK-------------RSR 225 (297)
Q Consensus 163 ~~~~~sp~--~~~l~s~~~d~~v~lwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~s~~-------------~~~ 225 (297)
.+++|+|+ +.+|++++.|++|++||++++.. ...+..|. ..+..++|+|+ +.+
T Consensus 103 ~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~----------~~v~~~~~~p~~~~~~~~~~~~~~~~~ 172 (297)
T 2pm7_B 103 NSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHA----------IGVNSASWAPATIEEDGEHNGTKESRK 172 (297)
T ss_dssp EEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCS----------SCEEEEEECCCC------------CCE
T ss_pred eEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeeccc----------CccceEeecCCcccccccCCCCCCcce
Confidence 99999997 88999999999999999986532 23344443 12345778886 456
Q ss_pred EEEeccCcccccCCCCeEEEEeCCCCc----eEEEeccCCC-eEEEEEcCCC---CEEEEEecCCCeEEEEEeCCc
Q psy3337 226 LFTLANPLAQNKRGISYVQQWDVDSGR----LRLAREMKES-LSALAVRDDG---RFVAVGTMFTGSVFVYIAFSL 293 (297)
Q Consensus 226 l~~~~~~~~~~g~~d~~i~~wd~~~~~----~~~~~~~~~~-v~~~~~s~dg---~~l~~~~~~dg~i~vwd~~~~ 293 (297)
|++ |+.|+.|++||+++++ +...+.+|.. |.+++|+|++ .+|++++. |++|+|||+.+.
T Consensus 173 l~s--------gs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~-D~~v~iWd~~~~ 239 (297)
T 2pm7_B 173 FVT--------GGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQ-DRTCIIWTQDNE 239 (297)
T ss_dssp EEE--------EETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEET-TSCEEEEEESST
T ss_pred EEE--------EcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEEC-CCcEEEEEeCCC
Confidence 777 5569999999998765 5667888877 9999999985 89999999 999999999764
No 76
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.5e-27 Score=210.25 Aligned_cols=184 Identities=12% Similarity=0.094 Sum_probs=156.0
Q ss_pred CCcCCCCCCCceEEE-Eee--CCCeEEEEe-cCCCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCeeeE----Eeccc
Q psy3337 87 PILNSIDSKEKNLRF-GFK--TFDSVQTVF-AGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLL----HIEAH 158 (297)
Q Consensus 87 ~~l~~~~~~d~~i~~-~~~--~~~~~~~~~-~~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~----~~~~~ 158 (297)
..|..+++.|++|++ ++. +++.+..+. ..|...|++++|+|++++|++|+.++.|++|++.+++... .+.+|
T Consensus 115 ~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h 194 (450)
T 2vdu_B 115 SRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGH 194 (450)
T ss_dssp SEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEEC
T ss_pred CEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCcccccccceeeecc
Confidence 334467888999999 888 888888776 3577899999999999999999999999999998776544 77889
Q ss_pred cCCeeEEEEccC---CCEEEEEeCCCcEEEEEcCCCceeee-eeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcc
Q psy3337 159 SKEIDDVDFSIS---GEQIVSIAKDGKAFVWNSKNGSLSKE-LKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLA 234 (297)
Q Consensus 159 ~~~v~~~~~sp~---~~~l~s~~~d~~v~lwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~ 234 (297)
...|.+++|+|+ +++|++++.|+.|++||+++++.+.. +..|. ..+..++|+ ++.+|++++
T Consensus 195 ~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~----------~~v~~~~~s-d~~~l~s~~---- 259 (450)
T 2vdu_B 195 VSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHK----------HFVSSICCG-KDYLLLSAG---- 259 (450)
T ss_dssp SSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCS----------SCEEEEEEC-STTEEEEEE----
T ss_pred cCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCC----------CceEEEEEC-CCCEEEEEe----
Confidence 999999999999 99999999999999999999887776 33443 123457889 999999854
Q ss_pred cccCCCCeEEEEeCCCCceEEEeccC--------------------------CCeEEEEEcCCCCEEEEEe-cCCCeEEE
Q psy3337 235 QNKRGISYVQQWDVDSGRLRLAREMK--------------------------ESLSALAVRDDGRFVAVGT-MFTGSVFV 287 (297)
Q Consensus 235 ~~g~~d~~i~~wd~~~~~~~~~~~~~--------------------------~~v~~~~~s~dg~~l~~~~-~~dg~i~v 287 (297)
.|+.|++||+.+++++..+..+ ..|.+++|+|++++|++++ . |+.|++
T Consensus 260 ----~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~-d~~i~i 334 (450)
T 2vdu_B 260 ----GDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEA-TKCIII 334 (450)
T ss_dssp ----SSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETT-CSEEEE
T ss_pred ----CCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECC-CCeEEE
Confidence 4999999999999988877532 2389999999999999999 7 999999
Q ss_pred EEe
Q psy3337 288 YIA 290 (297)
Q Consensus 288 wd~ 290 (297)
|++
T Consensus 335 w~~ 337 (450)
T 2vdu_B 335 LEM 337 (450)
T ss_dssp EEE
T ss_pred EEe
Confidence 999
No 77
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.96 E-value=8.2e-29 Score=217.35 Aligned_cols=161 Identities=17% Similarity=0.155 Sum_probs=129.6
Q ss_pred CCCCcEEEEEEec-CCCEEEEEcCCCcEEEEeCCCCeeeEEecc--ccCCeeEEEEccCCCEEEEEeCCCcEEEEEcCCC
Q psy3337 115 GSESLQRVVRLSR-NGDLMVTGGTDGHLRLWSFPKMKPLLHIEA--HSKEIDDVDFSISGEQIVSIAKDGKAFVWNSKNG 191 (297)
Q Consensus 115 ~h~~~v~~~~~s~-~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~--~~~~v~~~~~sp~~~~l~s~~~d~~v~lwd~~~~ 191 (297)
+|.+.|++++|+| ++++|++|+.|++|++||++++........ +...+.+++|+|++.+|++|+.|+.|++||++ +
T Consensus 162 gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~-~ 240 (435)
T 4e54_B 162 GAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMD-G 240 (435)
T ss_dssp SSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESS-S
T ss_pred CCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccC-c
Confidence 8999999999998 689999999999999999987654333332 34467899999999999999999999999985 4
Q ss_pred ceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeE-EEEeccCcccccCCCCeEEEEeCCCCceEEE---eccCCC-eEEE
Q psy3337 192 SLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSR-LFTLANPLAQNKRGISYVQQWDVDSGRLRLA---REMKES-LSAL 266 (297)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~-l~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~---~~~~~~-v~~~ 266 (297)
+.+..+..|. ..+..++|+|++.. +++ |+.|+.|++||+++.+.... ...|.. |.++
T Consensus 241 ~~~~~~~~h~----------~~v~~v~~~p~~~~~~~s--------~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~ 302 (435)
T 4e54_B 241 KELWNLRMHK----------KKVTHVALNPCCDWFLAT--------ASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAA 302 (435)
T ss_dssp CBCCCSBCCS----------SCEEEEEECTTCSSEEEE--------EETTSBCCEEETTTCCSSSCCSBCCBCSSCEEEC
T ss_pred ceeEEEeccc----------ceEEeeeecCCCceEEEE--------ecCcceeeEEecccccccceEEEeeeccccccce
Confidence 5566666664 12345889999874 555 45599999999988654333 234555 9999
Q ss_pred EEcCCCCEEEEEecCCCeEEEEEeCCcee
Q psy3337 267 AVRDDGRFVAVGTMFTGSVFVYIAFSLQM 295 (297)
Q Consensus 267 ~~s~dg~~l~~~~~~dg~i~vwd~~~~~~ 295 (297)
+|+|+|.+|++++. ||.|+|||+.+++.
T Consensus 303 ~~spdg~~l~s~~~-D~~i~iwd~~~~~~ 330 (435)
T 4e54_B 303 CFSPDGARLLTTDQ-KSEIRVYSASQWDC 330 (435)
T ss_dssp CBCTTSSEEEEEES-SSCEEEEESSSSSS
T ss_pred eECCCCCeeEEEcC-CCEEEEEECCCCcc
Confidence 99999999999999 99999999988654
No 78
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.5e-27 Score=203.53 Aligned_cols=239 Identities=13% Similarity=0.069 Sum_probs=186.4
Q ss_pred cceeeeCCCccEEEeccCCceeeEEEeeEEeeccccccccCCCCchhhhhhcccccchhhhhccCCCcccccccCCCCCC
Q psy3337 2 NCDVHSNGKNIYVVAGQENSNQLYKITAEFTQMNGVVKSKESNNTADTIVRKRKEKDKENAKQKGGKKEKSNEKGKNKKD 81 (297)
Q Consensus 2 ~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (297)
+|+.|++++++|++++.|+.++||++........ . .++...-... .
T Consensus 36 ~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~--~----------~~h~~~v~~~---------------------~- 81 (369)
T 3zwl_B 36 TQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGT--L----------DGHTGTIWSI---------------------D- 81 (369)
T ss_dssp EEEEECTTSCEEEEEESSSCEEEEETTTCCEEEE--E----------CCCSSCEEEE---------------------E-
T ss_pred EEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhh--h----------hhcCCcEEEE---------------------E-
Confidence 5677999999999999999999998754322110 0 0000000000 0
Q ss_pred CCCCCCCcCCCCCCCceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCEEEEEcCC-----CcEEEEeCCCCe-----
Q psy3337 82 KIEDPPILNSIDSKEKNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTD-----GHLRLWSFPKMK----- 150 (297)
Q Consensus 82 ~~~~~~~l~~~~~~d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d-----~~i~iwd~~~~~----- 150 (297)
...+ .-+..+++.|+.|++ ++.+++.+..+. |...|.+++|+|++++|++++.+ +.|++||+....
T Consensus 82 ~~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~ 158 (369)
T 3zwl_B 82 VDCF-TKYCVTGSADYSIKLWDVSNGQCVATWK--SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHEL 158 (369)
T ss_dssp ECTT-SSEEEEEETTTEEEEEETTTCCEEEEEE--CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCE
T ss_pred EcCC-CCEEEEEeCCCeEEEEECCCCcEEEEee--cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceee
Confidence 0000 111457788999999 999999888875 78889999999999999999999 999999986543
Q ss_pred ------eeEEeccccC--CeeEEEEccCCCEEEEEeCCCcEEEEEcCC-CceeeeeeccCCCCceEEEEeeeeeeeeeCC
Q psy3337 151 ------PLLHIEAHSK--EIDDVDFSISGEQIVSIAKDGKAFVWNSKN-GSLSKELKWNTPDNIKYLFKRCRYGLVEDSP 221 (297)
Q Consensus 151 ------~~~~~~~~~~--~v~~~~~sp~~~~l~s~~~d~~v~lwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 221 (297)
.+..+..|.. .+.+++|+|++++|++++.|+.|++||+++ +..+..+..|. ..+..++|+|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~----------~~v~~~~~~~ 228 (369)
T 3zwl_B 159 TKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHE----------KSISDMQFSP 228 (369)
T ss_dssp EEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCS----------SCEEEEEECT
T ss_pred cccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCC----------CceeEEEECC
Confidence 3445556666 899999999999999999999999999998 67777776654 1234578999
Q ss_pred CCeEEEEeccCcccccCCCCeEEEEeCCCCceEEEeccCCCeEEEEEcCCCCEEEEEecCCC--------------eEEE
Q psy3337 222 KRSRLFTLANPLAQNKRGISYVQQWDVDSGRLRLAREMKESLSALAVRDDGRFVAVGTMFTG--------------SVFV 287 (297)
Q Consensus 222 ~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~dg--------------~i~v 287 (297)
++.+|++++. |+.|++||+.+++.+..+.....+.+++|+|+++++++++. ++ .+++
T Consensus 229 ~~~~l~~~~~--------d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~i~~ 299 (369)
T 3zwl_B 229 DLTYFITSSR--------DTNSFLVDVSTLQVLKKYETDCPLNTAVITPLKEFIILGGG-QEAKDVTTTSANEGKFEARF 299 (369)
T ss_dssp TSSEEEEEET--------TSEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEEC-CC-------------CEEEE
T ss_pred CCCEEEEecC--------CceEEEEECCCCceeeeecCCCCceeEEecCCCceEEEeec-CCCceEEEEecCCCcceeEE
Confidence 9999998554 99999999999999999987667999999999999999998 88 8999
Q ss_pred EEeCCceec
Q psy3337 288 YIAFSLQMC 296 (297)
Q Consensus 288 wd~~~~~~~ 296 (297)
||+.+++.+
T Consensus 300 ~d~~~~~~~ 308 (369)
T 3zwl_B 300 YHKIFEEEI 308 (369)
T ss_dssp EETTTCCEE
T ss_pred EecCCCcch
Confidence 999887654
No 79
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.96 E-value=2.2e-28 Score=208.06 Aligned_cols=183 Identities=13% Similarity=0.153 Sum_probs=149.8
Q ss_pred CCCCCCCceEEE-EeeCCC-eEEEEecCCCCcEEEEEE------ecCCCEEEEEcCCCcEEEEeCCCCe-eeEEeccccC
Q psy3337 90 NSIDSKEKNLRF-GFKTFD-SVQTVFAGSESLQRVVRL------SRNGDLMVTGGTDGHLRLWSFPKMK-PLLHIEAHSK 160 (297)
Q Consensus 90 ~~~~~~d~~i~~-~~~~~~-~~~~~~~~h~~~v~~~~~------s~~g~~l~s~~~d~~i~iwd~~~~~-~~~~~~~~~~ 160 (297)
..+++.|+.|++ ++.+++ .+..+. +|...|.++.| +|++++|++++.|+.|++||+++++ .+..+..|..
T Consensus 83 l~~~~~dg~i~iwd~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~ 161 (357)
T 3i2n_A 83 LATGDFGGNLHIWNLEAPEMPVYSVK-GHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQG 161 (357)
T ss_dssp EEEEETTSCEEEECTTSCSSCSEEEC-CCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTT
T ss_pred EEEecCCCeEEEEeCCCCCccEEEEE-ecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCC
Confidence 557888999999 888887 777777 99999999955 6899999999999999999999876 6777766654
Q ss_pred ----CeeEEE----EccCCCEEEEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCC---CCeEEEEe
Q psy3337 161 ----EIDDVD----FSISGEQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSP---KRSRLFTL 229 (297)
Q Consensus 161 ----~v~~~~----~sp~~~~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~---~~~~l~~~ 229 (297)
.+.+++ |+|++++|++++.|+.|++||+++++...... +. ..+..++|+| ++.+++++
T Consensus 162 ~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~----------~~v~~~~~~~~~~~~~~l~~~ 230 (357)
T 3i2n_A 162 ENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETN-IK----------NGVCSLEFDRKDISMNKLVAT 230 (357)
T ss_dssp SCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEE-CS----------SCEEEEEESCSSSSCCEEEEE
T ss_pred CCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecC-CC----------CceEEEEcCCCCCCCCEEEEE
Confidence 788998 78899999999999999999999887654432 21 2244578999 89999985
Q ss_pred ccCcccccCCCCeEEEEeCCCCceEEEec-----cCCC-eEEEEEcCCCC-EEEEEecCCCeEEEEEeCCc
Q psy3337 230 ANPLAQNKRGISYVQQWDVDSGRLRLARE-----MKES-LSALAVRDDGR-FVAVGTMFTGSVFVYIAFSL 293 (297)
Q Consensus 230 ~~~~~~~g~~d~~i~~wd~~~~~~~~~~~-----~~~~-v~~~~~s~dg~-~l~~~~~~dg~i~vwd~~~~ 293 (297)
+ .|+.|++||+++++.+..+. .|.. |.+++|+|++. +|++++. ||.|++||+.++
T Consensus 231 ~--------~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~ 292 (357)
T 3i2n_A 231 S--------LEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGG-AGGLHLWKYEYP 292 (357)
T ss_dssp E--------STTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEET-TSEEEEEEEECC
T ss_pred C--------CCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeC-CCcEEEeecCCC
Confidence 4 49999999998865443333 6665 99999999998 8999999 999999999864
No 80
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.96 E-value=1.3e-27 Score=211.13 Aligned_cols=182 Identities=21% Similarity=0.278 Sum_probs=158.4
Q ss_pred CCCCCCCceEEE-EeeCCCeEEEEecCCCCcEEEEEEec--CCCEEEEEcCCCcEEEEeCCCCee---------------
Q psy3337 90 NSIDSKEKNLRF-GFKTFDSVQTVFAGSESLQRVVRLSR--NGDLMVTGGTDGHLRLWSFPKMKP--------------- 151 (297)
Q Consensus 90 ~~~~~~d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~--~g~~l~s~~~d~~i~iwd~~~~~~--------------- 151 (297)
..+++.|++|++ ++.+++.+..+. +|...|.+++|++ ++++|++|+.|+.|++||++++..
T Consensus 176 l~s~s~dg~i~vwd~~~~~~~~~~~-~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~ 254 (464)
T 3v7d_B 176 LVSGSTDRTVRVWDIKKGCCTHVFE-GHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFH 254 (464)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEEC-CCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEES
T ss_pred EEEEeCCCCEEEEECCCCcEEEEEC-CCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEee
Confidence 568899999999 999999988888 9999999999994 778999999999999999987652
Q ss_pred --------eEEeccccCCeeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCC
Q psy3337 152 --------LLHIEAHSKEIDDVDFSISGEQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKR 223 (297)
Q Consensus 152 --------~~~~~~~~~~v~~~~~sp~~~~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 223 (297)
+..+.+|...|.++ ++++++|++++.|+.|++||+++++.+..+..|.. .+..++|+|++
T Consensus 255 ~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~----------~v~~~~~~~~~ 322 (464)
T 3v7d_B 255 TPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTD----------RIYSTIYDHER 322 (464)
T ss_dssp CGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEECCCSS----------CEEEEEEETTT
T ss_pred ccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCC----------CEEEEEEcCCC
Confidence 45677888888877 57788999999999999999999999888877642 23357789999
Q ss_pred eEEEEeccCcccccCCCCeEEEEeCCCCceEEEeccCCC-eEEEEEcCCCCEEEEEecCCCeEEEEEeCCcee
Q psy3337 224 SRLFTLANPLAQNKRGISYVQQWDVDSGRLRLAREMKES-LSALAVRDDGRFVAVGTMFTGSVFVYIAFSLQM 295 (297)
Q Consensus 224 ~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~-v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~~~~ 295 (297)
.+++++ +.|+.|++||+.+++++..+.+|.. |.+++|+ +.+|++++. ||.|++||+.+++.
T Consensus 323 ~~l~sg--------~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~-dg~v~vwd~~~~~~ 384 (464)
T 3v7d_B 323 KRCISA--------SMDTTIRIWDLENGELMYTLQGHTALVGLLRLS--DKFLVSAAA-DGSIRGWDANDYSR 384 (464)
T ss_dssp TEEEEE--------ETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC--SSEEEEEET-TSEEEEEETTTCCE
T ss_pred CEEEEE--------eCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEc--CCEEEEEeC-CCcEEEEECCCCce
Confidence 999984 4599999999999999999998877 9999997 589999999 99999999988654
No 81
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.96 E-value=1.7e-27 Score=208.76 Aligned_cols=246 Identities=11% Similarity=0.115 Sum_probs=179.8
Q ss_pred CcceeeeCC-CccEEEeccCCceeeEEEeeEEeeccccccccCCCCchhhhhhcccccchhhhhccCCCcccccccCCCC
Q psy3337 1 MNCDVHSNG-KNIYVVAGQENSNQLYKITAEFTQMNGVVKSKESNNTADTIVRKRKEKDKENAKQKGGKKEKSNEKGKNK 79 (297)
Q Consensus 1 ~~~~~~~~~-~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (297)
++|+.|++. +.+|++++.|+.++||++........ . .+. .+.......+..+
T Consensus 131 v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~------~------~~~---------------~~~~~~~~~h~~~ 183 (430)
T 2xyi_A 131 VNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPE------P------SGE---------------CQPDLRLRGHQKE 183 (430)
T ss_dssp CSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCC------T------TCC---------------CCCSEEEECCSSC
T ss_pred EEEEEECCCCCcEEEEECCCCcEEEEECCCcccccC------c------ccc---------------CCCcEEecCCCCC
Confidence 466778886 67888889999999999965321100 0 000 0000000001111
Q ss_pred CCCCC---CCCCcCCCCCCCceEEE-EeeCCCe-------EEEEecCCCCcEEEEEEec-CCCEEEEEcCCCcEEEEeCC
Q psy3337 80 KDKIE---DPPILNSIDSKEKNLRF-GFKTFDS-------VQTVFAGSESLQRVVRLSR-NGDLMVTGGTDGHLRLWSFP 147 (297)
Q Consensus 80 ~~~~~---~~~~l~~~~~~d~~i~~-~~~~~~~-------~~~~~~~h~~~v~~~~~s~-~g~~l~s~~~d~~i~iwd~~ 147 (297)
..... ..+-+..+++.|+.|++ ++.++.. ...+. +|...|.+++|+| ++.+|++++.|+.|++||++
T Consensus 184 v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~-~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~ 262 (430)
T 2xyi_A 184 GYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFT-GHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTR 262 (430)
T ss_dssp CCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEEC-CCSSCEEEEEECSSCTTEEEEEETTSEEEEEETT
T ss_pred eEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeec-CCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECC
Confidence 11111 11113557888999999 7776322 23444 8999999999999 67899999999999999998
Q ss_pred CC---eeeEEeccccCCeeEEEEccCCC-EEEEEeCCCcEEEEEcCC-CceeeeeeccCCCCceEEEEeeeeeeeeeCCC
Q psy3337 148 KM---KPLLHIEAHSKEIDDVDFSISGE-QIVSIAKDGKAFVWNSKN-GSLSKELKWNTPDNIKYLFKRCRYGLVEDSPK 222 (297)
Q Consensus 148 ~~---~~~~~~~~~~~~v~~~~~sp~~~-~l~s~~~d~~v~lwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 222 (297)
++ +.+..+..|...|++++|+|++. +|++++.|+.|++||+++ ...+..+..|. ..+..++|+|+
T Consensus 263 ~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~----------~~v~~i~~sp~ 332 (430)
T 2xyi_A 263 NNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHK----------DEIFQVQWSPH 332 (430)
T ss_dssp CSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCS----------SCEEEEEECSS
T ss_pred CCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCC----------CCEEEEEECCC
Confidence 76 57778889999999999999887 688999999999999987 45667776654 22445889999
Q ss_pred CeE-EEEeccCcccccCCCCeEEEEeCCC--------------CceEEEeccCCC-eEEEEEcCCCC-EEEEEecCCCeE
Q psy3337 223 RSR-LFTLANPLAQNKRGISYVQQWDVDS--------------GRLRLAREMKES-LSALAVRDDGR-FVAVGTMFTGSV 285 (297)
Q Consensus 223 ~~~-l~~~~~~~~~~g~~d~~i~~wd~~~--------------~~~~~~~~~~~~-v~~~~~s~dg~-~l~~~~~~dg~i 285 (297)
+.. |++ ++.|+.|++||+.. .+.+..+.+|.. |.+++|+|++. +|++++. ||.|
T Consensus 333 ~~~~l~s--------~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~-dg~i 403 (430)
T 2xyi_A 333 NETILAS--------SGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSE-DNIM 403 (430)
T ss_dssp CTTEEEE--------EETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEET-TSEE
T ss_pred CCCEEEE--------EeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEEC-CCCE
Confidence 964 666 44599999999987 366777777776 99999999999 8999999 9999
Q ss_pred EEEEeCCc
Q psy3337 286 FVYIAFSL 293 (297)
Q Consensus 286 ~vwd~~~~ 293 (297)
+||++...
T Consensus 404 ~iw~~~~~ 411 (430)
T 2xyi_A 404 QVWQMAEN 411 (430)
T ss_dssp EEEEECHH
T ss_pred EEeEcccc
Confidence 99998653
No 82
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.96 E-value=1.2e-27 Score=206.19 Aligned_cols=161 Identities=14% Similarity=0.151 Sum_probs=136.0
Q ss_pred CCCCcEEEEEEec-CCCEEEEEcCCCcEEEEeCCCCeeeEEecc---ccCCeeEEEEccCCCEEEEEeCCCcEEEEEcCC
Q psy3337 115 GSESLQRVVRLSR-NGDLMVTGGTDGHLRLWSFPKMKPLLHIEA---HSKEIDDVDFSISGEQIVSIAKDGKAFVWNSKN 190 (297)
Q Consensus 115 ~h~~~v~~~~~s~-~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~---~~~~v~~~~~sp~~~~l~s~~~d~~v~lwd~~~ 190 (297)
+|...|.+++|+| ++++|++++.|+.|++||+.+ ..+..+.. |...|.+++|+|++++|++++.|+.|++||+ +
T Consensus 116 ~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~ 193 (383)
T 3ei3_B 116 GPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-D 193 (383)
T ss_dssp STTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-T
T ss_pred CcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-C
Confidence 7999999999999 779999999999999999985 44555544 3478999999999999999999999999999 5
Q ss_pred CceeeeeeccCCCCceEEEEeeeeeeeeeCCCCe-EEEEeccCcccccCCCCeEEEEeCCC----CceEEEeccCCCeEE
Q psy3337 191 GSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRS-RLFTLANPLAQNKRGISYVQQWDVDS----GRLRLAREMKESLSA 265 (297)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~-~l~~~~~~~~~~g~~d~~i~~wd~~~----~~~~~~~~~~~~v~~ 265 (297)
++.+..+..|. ..+..++|+|++. +++++ +.|+.|++||+++ +.++..+.....|.+
T Consensus 194 ~~~~~~~~~h~----------~~v~~~~~~~~~~~~l~s~--------~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~ 255 (383)
T 3ei3_B 194 GHEIFKEKLHK----------AKVTHAEFNPRCDWLMATS--------SVDATVKLWDLRNIKDKNSYIAEMPHEKPVNA 255 (383)
T ss_dssp SCEEEEEECSS----------SCEEEEEECSSCTTEEEEE--------ETTSEEEEEEGGGCCSTTCEEEEEECSSCEEE
T ss_pred CCEEEEeccCC----------CcEEEEEECCCCCCEEEEE--------eCCCEEEEEeCCCCCcccceEEEecCCCceEE
Confidence 67777777664 1234588999998 78874 4599999999998 667777754445999
Q ss_pred EEEcC-CCCEEEEEecCCCeEEEEEeCCceec
Q psy3337 266 LAVRD-DGRFVAVGTMFTGSVFVYIAFSLQMC 296 (297)
Q Consensus 266 ~~~s~-dg~~l~~~~~~dg~i~vwd~~~~~~~ 296 (297)
++|+| ++.+|++++. |+.|++||+.+++.+
T Consensus 256 ~~~s~~~~~~l~~~~~-d~~i~iwd~~~~~~~ 286 (383)
T 3ei3_B 256 AYFNPTDSTKLLTTDQ-RNEIRVYSSYDWSKP 286 (383)
T ss_dssp EEECTTTSCEEEEEES-SSEEEEEETTBTTSC
T ss_pred EEEcCCCCCEEEEEcC-CCcEEEEECCCCccc
Confidence 99999 9999999999 999999999887653
No 83
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.96 E-value=2e-28 Score=207.32 Aligned_cols=239 Identities=8% Similarity=-0.003 Sum_probs=177.3
Q ss_pred cceeeeCCCccEEEeccCCceeeEEEeeEEeeccccccccCCCCchhhhhhcc-cccchhhhhccCCCcccccccCCCCC
Q psy3337 2 NCDVHSNGKNIYVVAGQENSNQLYKITAEFTQMNGVVKSKESNNTADTIVRKR-KEKDKENAKQKGGKKEKSNEKGKNKK 80 (297)
Q Consensus 2 ~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (297)
+|+.|++++++|++++.|+.++||++............. . +... ....
T Consensus 15 ~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~-~--------~~~~v~~~~---------------------- 63 (342)
T 1yfq_A 15 SDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSL-R--------YKHPLLCCN---------------------- 63 (342)
T ss_dssp EEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEE-E--------CSSCEEEEE----------------------
T ss_pred EEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeee-e--------cCCceEEEE----------------------
Confidence 466789999999999999999999987532000000000 0 0000 0000
Q ss_pred CCCCCCCC-cCCCCCCCceEEE-Ee-eCCCeEEEEecC--CCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCC-------
Q psy3337 81 DKIEDPPI-LNSIDSKEKNLRF-GF-KTFDSVQTVFAG--SESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPK------- 148 (297)
Q Consensus 81 ~~~~~~~~-l~~~~~~d~~i~~-~~-~~~~~~~~~~~~--h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~------- 148 (297)
...+ .- +..+++.|+.|++ ++ .+++. ..+. + |...|.+++|+| +++|++++.|+.|++||+++
T Consensus 64 -~~~~-~~~~l~~~~~dg~i~~wd~~~~~~~-~~~~-~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~ 138 (342)
T 1yfq_A 64 -FIDN-TDLQIYVGTVQGEILKVDLIGSPSF-QALT-NNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIA 138 (342)
T ss_dssp -EEES-SSEEEEEEETTSCEEEECSSSSSSE-EECB-SCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEE
T ss_pred -ECCC-CCcEEEEEcCCCeEEEEEeccCCce-Eecc-ccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEccccccccccc
Confidence 0000 11 2456778999999 77 66654 5555 7 999999999999 99999999999999999987
Q ss_pred --CeeeEEeccccCCeeEEEEccCCCEEEEEeCCCcEEEEEcCC-CceeeeeeccCCCCceEEEEeeeeeeeeeCC-CCe
Q psy3337 149 --MKPLLHIEAHSKEIDDVDFSISGEQIVSIAKDGKAFVWNSKN-GSLSKELKWNTPDNIKYLFKRCRYGLVEDSP-KRS 224 (297)
Q Consensus 149 --~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~d~~v~lwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-~~~ 224 (297)
++++..+. |...|.+++|+|++ |++++.|+.|++||+++ +........... ...+..++|+| ++.
T Consensus 139 ~~~~~~~~~~-~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~--------~~~i~~i~~~~~~~~ 207 (342)
T 1yfq_A 139 VKNLNSNNTK-VKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGL--------KYQIRDVALLPKEQE 207 (342)
T ss_dssp EEESCSSSSS-SCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTTCCCEEEECSC--------SSCEEEEEECSGGGC
T ss_pred ccCCeeeEEe-eCCceEEEEecCCc--EEEEeCCCeEEEEECCccccccceeeecCC--------CCceeEEEECCCCCC
Confidence 77777776 88999999999987 99999999999999987 543221111110 11234588999 999
Q ss_pred EEEEeccCcccccCCCCeEEEEeCCCC------ceEEEeccCC----------CeEEEEEcCCCCEEEEEecCCCeEEEE
Q psy3337 225 RLFTLANPLAQNKRGISYVQQWDVDSG------RLRLAREMKE----------SLSALAVRDDGRFVAVGTMFTGSVFVY 288 (297)
Q Consensus 225 ~l~~~~~~~~~~g~~d~~i~~wd~~~~------~~~~~~~~~~----------~v~~~~~s~dg~~l~~~~~~dg~i~vw 288 (297)
++++.+ .++.|++|++... +....+..|. .|.+++|+|++++|++++. ||.|++|
T Consensus 208 ~l~~~~--------~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-dg~i~vw 278 (342)
T 1yfq_A 208 GYACSS--------IDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGS-DGIISCW 278 (342)
T ss_dssp EEEEEE--------TTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEET-TSCEEEE
T ss_pred EEEEEe--------cCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecC-CceEEEE
Confidence 999854 4999999999886 7777777653 5999999999999999999 9999999
Q ss_pred EeCCceec
Q psy3337 289 IAFSLQMC 296 (297)
Q Consensus 289 d~~~~~~~ 296 (297)
|+.+++++
T Consensus 279 d~~~~~~~ 286 (342)
T 1yfq_A 279 NLQTRKKI 286 (342)
T ss_dssp ETTTTEEE
T ss_pred cCccHhHh
Confidence 99988764
No 84
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.96 E-value=4.1e-28 Score=226.64 Aligned_cols=239 Identities=13% Similarity=0.095 Sum_probs=179.0
Q ss_pred cceeeeCCCccEEEeccCCceeeEEEee--EEeeccccccccCCCCchhhhhhcccccchhhhhccCCCcccccccCCCC
Q psy3337 2 NCDVHSNGKNIYVVAGQENSNQLYKITA--EFTQMNGVVKSKESNNTADTIVRKRKEKDKENAKQKGGKKEKSNEKGKNK 79 (297)
Q Consensus 2 ~~~~~~~~~~~~~~~g~d~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (297)
+|..|++++++|++|+.|+.++||++.. ..... .. .++......-.
T Consensus 13 ~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~--~l----------~~h~~~V~~l~-------------------- 60 (753)
T 3jro_A 13 HDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLID--TL----------TGHEGPVWRVD-------------------- 60 (753)
T ss_dssp EEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEE--EE----------CCCSSCEEEEE--------------------
T ss_pred EEEEECCCCCeEEEEECCCcEEEEecCCCCCccce--ec----------cCCcCceEEEE--------------------
Confidence 5677899999999999999999999873 22110 00 00000000000
Q ss_pred CCCCCCCCCcCCCCCCCceEEE-EeeCCC--eEEEEecCCCCcEEEEEEecC--CCEEEEEcCCCcEEEEeCCCCe--ee
Q psy3337 80 KDKIEDPPILNSIDSKEKNLRF-GFKTFD--SVQTVFAGSESLQRVVRLSRN--GDLMVTGGTDGHLRLWSFPKMK--PL 152 (297)
Q Consensus 80 ~~~~~~~~~l~~~~~~d~~i~~-~~~~~~--~~~~~~~~h~~~v~~~~~s~~--g~~l~s~~~d~~i~iwd~~~~~--~~ 152 (297)
.......-+..+++.|++|++ ++.+++ .+..+. +|...|++++|+|+ +++|++|+.||.|++||++++. ..
T Consensus 61 -~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~-~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~ 138 (753)
T 3jro_A 61 -WAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHA-VHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSP 138 (753)
T ss_dssp -ECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEEC-CCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCC
T ss_pred -ecCCCCCCEEEEEeCCCeEEEEECCCCccccccccc-CCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcce
Confidence 000000112567889999999 888886 555565 89999999999999 9999999999999999998763 45
Q ss_pred EEeccccCCeeEEEEcc-------------CCCEEEEEeCCCcEEEEEcCCCc----eeeeeeccCCCCceEEEEeeeee
Q psy3337 153 LHIEAHSKEIDDVDFSI-------------SGEQIVSIAKDGKAFVWNSKNGS----LSKELKWNTPDNIKYLFKRCRYG 215 (297)
Q Consensus 153 ~~~~~~~~~v~~~~~sp-------------~~~~l~s~~~d~~v~lwd~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 215 (297)
..+.+|...|.+++|+| ++.+|++++.||.|++||++++. ....+..|. ..+.
T Consensus 139 ~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~----------~~V~ 208 (753)
T 3jro_A 139 IIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHS----------DWVR 208 (753)
T ss_dssp EEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCS----------SCEE
T ss_pred eEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCC----------CcEE
Confidence 56778999999999999 58999999999999999998773 334444443 2344
Q ss_pred eeeeCCC---CeEEEEeccCcccccCCCCeEEEEeCCCCc-----eEEEeccCCC-eEEEEEcCCCCEEEEEecCCCeEE
Q psy3337 216 LVEDSPK---RSRLFTLANPLAQNKRGISYVQQWDVDSGR-----LRLAREMKES-LSALAVRDDGRFVAVGTMFTGSVF 286 (297)
Q Consensus 216 ~~~~s~~---~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~-----~~~~~~~~~~-v~~~~~s~dg~~l~~~~~~dg~i~ 286 (297)
.++|+|+ +.++++++ .|+.|++||+.+++ .......+.. |.+++|+|+|.+|++++. ||.|+
T Consensus 209 ~l~~sp~~~~~~~l~s~s--------~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~-Dg~I~ 279 (753)
T 3jro_A 209 DVAWSPTVLLRSYLASVS--------QDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGG-DNKVT 279 (753)
T ss_dssp EEEECCCCSSSEEEEEEE--------SSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECS-SSCEE
T ss_pred EEEeccCCCCCCEEEEEe--------cCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcC-CCEEE
Confidence 5889999 89999855 49999999999864 2222233444 999999999999999999 99999
Q ss_pred EEEeCCc
Q psy3337 287 VYIAFSL 293 (297)
Q Consensus 287 vwd~~~~ 293 (297)
+||+.+.
T Consensus 280 vwd~~~~ 286 (753)
T 3jro_A 280 LWKENLE 286 (753)
T ss_dssp CCBCCSS
T ss_pred EEecCCC
Confidence 9998853
No 85
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.96 E-value=1.6e-28 Score=210.92 Aligned_cols=185 Identities=11% Similarity=0.000 Sum_probs=148.9
Q ss_pred CCCCCCCceEEE-EeeCC--CeEEEEecCCCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCe---eeEEeccccCCee
Q psy3337 90 NSIDSKEKNLRF-GFKTF--DSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMK---PLLHIEAHSKEID 163 (297)
Q Consensus 90 ~~~~~~d~~i~~-~~~~~--~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~---~~~~~~~~~~~v~ 163 (297)
..+++.|+.|++ ++.++ +.+..+. +|...|.+++|+|++++|++++.|+.|++||+.+++ ....+..|...|.
T Consensus 26 l~~~~~d~~i~iw~~~~~~~~~~~~~~-~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~ 104 (377)
T 3dwl_C 26 FVTTTATNQVELYEQDGNGWKHARTFS-DHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAAT 104 (377)
T ss_dssp EECCCSSSCBCEEEEETTEEEECCCBC-CCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEE
T ss_pred EEEecCCCEEEEEEccCCceEEEEEEe-cCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceE
Confidence 457788999999 88887 6666776 999999999999999999999999999999998876 6778888999999
Q ss_pred EEEEccCCCEEEEEeCCCcEEEEEcCCCce---eeeeec-cCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCC
Q psy3337 164 DVDFSISGEQIVSIAKDGKAFVWNSKNGSL---SKELKW-NTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRG 239 (297)
Q Consensus 164 ~~~~sp~~~~l~s~~~d~~v~lwd~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~ 239 (297)
+++|+|++++|++++.|+.|++||+++++. ...+.. |. ..+..++|+|++.+|++++ .
T Consensus 105 ~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~----------~~v~~~~~~~~~~~l~~~~--------~ 166 (377)
T 3dwl_C 105 FVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLR----------STILSLDWHPNNVLLAAGC--------A 166 (377)
T ss_dssp EEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCC----------SCEEEEEECTTSSEEEEEE--------S
T ss_pred EEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccC----------CCeEEEEEcCCCCEEEEEe--------C
Confidence 999999999999999999999999988763 455544 32 2344588999999999854 4
Q ss_pred CCeEEEEeCC------------------CCceEEEeccCCC-eEEEEEcCCCCEEEEEecCCCeEEEEEeCCcee
Q psy3337 240 ISYVQQWDVD------------------SGRLRLAREMKES-LSALAVRDDGRFVAVGTMFTGSVFVYIAFSLQM 295 (297)
Q Consensus 240 d~~i~~wd~~------------------~~~~~~~~~~~~~-v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~~~~ 295 (297)
|+.|++||+. .++++..+ .|.. |.+++|+|+|++|++++. ||.|++||+.+++.
T Consensus 167 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~-d~~i~iwd~~~~~~ 239 (377)
T 3dwl_C 167 DRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGH-DSSVTIAYPSAPEQ 239 (377)
T ss_dssp SSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEET-TTEEC-CEECSTTS
T ss_pred CCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeC-CCcEEEEECCCCCC
Confidence 9999999985 35566666 6655 999999999999999999 99999999998765
No 86
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.96 E-value=1.2e-26 Score=196.20 Aligned_cols=243 Identities=18% Similarity=0.161 Sum_probs=183.4
Q ss_pred cceeeeCC-CccEEEeccCCceeeEEEeeEEeeccccccccCCCCchhhhhhcccccchhhhhccCCCcccccccCCCCC
Q psy3337 2 NCDVHSNG-KNIYVVAGQENSNQLYKITAEFTQMNGVVKSKESNNTADTIVRKRKEKDKENAKQKGGKKEKSNEKGKNKK 80 (297)
Q Consensus 2 ~~~~~~~~-~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (297)
+|..|+++ +++|++||.|+.++||++........... ...+++...-. .
T Consensus 42 ~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~-------~~l~~h~~~V~-----~------------------ 91 (340)
T 4aow_A 42 TQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQ-------RALRGHSHFVS-----D------------------ 91 (340)
T ss_dssp EEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEE-------EEECCCSSCEE-----E------------------
T ss_pred EEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceee-------EEEeCCCCCEE-----E------------------
Confidence 56678865 67899999999999999875321100000 00000000000 0
Q ss_pred CCCCCCCCcCCCCCCCceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCee-eEEeccc
Q psy3337 81 DKIEDPPILNSIDSKEKNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKP-LLHIEAH 158 (297)
Q Consensus 81 ~~~~~~~~l~~~~~~d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~-~~~~~~~ 158 (297)
....+..-+..+++.|+.|++ +........... .+...+..+.+++++++|++|+.|+.+++||+..... ...+.+|
T Consensus 92 ~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~ 170 (340)
T 4aow_A 92 VVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFV-GHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESH 170 (340)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSC
T ss_pred EEECCCCCEEEEEcccccceEEeecccceeeeec-CCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccc
Confidence 000001112457889999999 777777766666 8888899999999999999999999999999876543 4556789
Q ss_pred cCCeeEEEEccCC--CEEEEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccc
Q psy3337 159 SKEIDDVDFSISG--EQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQN 236 (297)
Q Consensus 159 ~~~v~~~~~sp~~--~~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~ 236 (297)
...+..++|++++ .++++++.|+.|++||+++++.+..+..|.. .+..++|+|++.+|++++
T Consensus 171 ~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~----------~v~~~~~s~~~~~l~s~s------ 234 (340)
T 4aow_A 171 SEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTG----------YLNTVTVSPDGSLCASGG------ 234 (340)
T ss_dssp SSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSS----------CEEEEEECTTSSEEEEEE------
T ss_pred cCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCC----------cEEEEEECCCCCEEEEEe------
Confidence 9999999998864 5788999999999999999999888877642 234578999999999854
Q ss_pred cCCCCeEEEEeCCCCceEEEeccCCCeEEEEEcCCCCEEEEEecCCCeEEEEEeCCcee
Q psy3337 237 KRGISYVQQWDVDSGRLRLAREMKESLSALAVRDDGRFVAVGTMFTGSVFVYIAFSLQM 295 (297)
Q Consensus 237 g~~d~~i~~wd~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~~~~ 295 (297)
.|+.|++||+++.+++..+..+..|.+++|+|++.+++++ . |+.|++||++++..
T Consensus 235 --~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~-d~~i~iwd~~~~~~ 289 (340)
T 4aow_A 235 --KDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLCAA-T-GPSIKIWDLEGKII 289 (340)
T ss_dssp --TTCEEEEEETTTTEEEEEEECSSCEEEEEECSSSSEEEEE-E-TTEEEEEETTTTEE
T ss_pred --CCCeEEEEEeccCceeeeecCCceEEeeecCCCCceeecc-C-CCEEEEEECCCCeE
Confidence 5999999999999999999988889999999998766555 5 99999999987654
No 87
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.96 E-value=3.1e-27 Score=208.60 Aligned_cols=182 Identities=20% Similarity=0.292 Sum_probs=154.3
Q ss_pred CCCCCCCceEEE-EeeCCCe-----------------------EEEEecCCCCcEEEEEEecCCCEEEEEcCCCcEEEEe
Q psy3337 90 NSIDSKEKNLRF-GFKTFDS-----------------------VQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWS 145 (297)
Q Consensus 90 ~~~~~~d~~i~~-~~~~~~~-----------------------~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd 145 (297)
..+++.|++|++ ++.++.. +..+. +|...|.++ ++++++|++|+.|+.|++||
T Consensus 220 l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd 296 (464)
T 3v7d_B 220 IVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLR-GHMASVRTV--SGHGNIVVSGSYDNTLIVWD 296 (464)
T ss_dssp EEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEEC-CCSSCEEEE--EEETTEEEEEETTSCEEEEE
T ss_pred EEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEcc-CccceEEEE--cCCCCEEEEEeCCCeEEEEE
Confidence 457888999999 8776653 33444 899988776 67889999999999999999
Q ss_pred CCCCeeeEEeccccCCeeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeE
Q psy3337 146 FPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSR 225 (297)
Q Consensus 146 ~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 225 (297)
+.+++.+..+.+|...|.+++|+|++++|++++.|+.|++||+++++.+..+..|... +..+.++ +.+
T Consensus 297 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~----------v~~~~~~--~~~ 364 (464)
T 3v7d_B 297 VAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTAL----------VGLLRLS--DKF 364 (464)
T ss_dssp TTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSC----------EEEEEEC--SSE
T ss_pred CCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCc----------EEEEEEc--CCE
Confidence 9999999999999999999999999999999999999999999999999998877522 2235555 567
Q ss_pred EEEeccCcccccCCCCeEEEEeCCCCceEEEeccCCCeEEEEEcCCCCEEEEEecCCCeEEEEEeCCceec
Q psy3337 226 LFTLANPLAQNKRGISYVQQWDVDSGRLRLAREMKESLSALAVRDDGRFVAVGTMFTGSVFVYIAFSLQMC 296 (297)
Q Consensus 226 l~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~~~~~ 296 (297)
++++ +.|+.|++||+.++...........+..++|+|++.+|++|+ ||.|++||+.+++.+
T Consensus 365 l~s~--------s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--dg~i~iwd~~~g~~~ 425 (464)
T 3v7d_B 365 LVSA--------AADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGS--ENQFNIYNLRSGKLV 425 (464)
T ss_dssp EEEE--------ETTSEEEEEETTTCCEEEEEECTTCCCEEEEEECSSEEEEEE--TTEEEEEETTTCCEE
T ss_pred EEEE--------eCCCcEEEEECCCCceeeeecCCCCccEEEEEeCCCEEEEec--CCeEEEEECCCCcEE
Confidence 8774 459999999999988777766555588899999999999988 899999999998875
No 88
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.96 E-value=2.9e-27 Score=215.30 Aligned_cols=187 Identities=14% Similarity=0.122 Sum_probs=160.5
Q ss_pred CCCCCCCceEEE-EeeCC--------CeEEEEecCCCCcEEEEEEecCCCEEEEEcCC----CcEEEEeCCCCeeeEEec
Q psy3337 90 NSIDSKEKNLRF-GFKTF--------DSVQTVFAGSESLQRVVRLSRNGDLMVTGGTD----GHLRLWSFPKMKPLLHIE 156 (297)
Q Consensus 90 ~~~~~~d~~i~~-~~~~~--------~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d----~~i~iwd~~~~~~~~~~~ 156 (297)
..+++.|++|++ ++.++ +.+..+. .|...|.+++|+|++++|++++.+ +.|++|| .++.+..+.
T Consensus 81 l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~ 157 (615)
T 1pgu_A 81 LCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQ-VLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLGEVS 157 (615)
T ss_dssp EEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEE-CCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEEECC
T ss_pred EEEecCCCEEEEEeCCCCcccccccccccchhh-cccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcceeee
Confidence 557788999999 88654 5666666 899999999999999999999988 6888898 567888999
Q ss_pred cccCCeeEEEEccCCC-EEEEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCC-CeEEEEeccCcc
Q psy3337 157 AHSKEIDDVDFSISGE-QIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPK-RSRLFTLANPLA 234 (297)
Q Consensus 157 ~~~~~v~~~~~sp~~~-~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~-~~~l~~~~~~~~ 234 (297)
+|...|.+++|+|++. +|++++.|+.|++||+.+++.+..+..|.... ..+..++|+|+ +.+|++++
T Consensus 158 ~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~~l~~~~---- 226 (615)
T 1pgu_A 158 GHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQG-------SFVRDVEFSPDSGEFVITVG---- 226 (615)
T ss_dssp SCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTT-------CCEEEEEECSTTCCEEEEEE----
T ss_pred cCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCC-------ceEEEEEECCCCCCEEEEEe----
Confidence 9999999999999998 89999999999999999999888887764210 02345889999 99999854
Q ss_pred cccCCCCeEEEEeCCCCceEEEe-c---cCCC-eEEEEEcCCCCEEEEEecCCCeEEEEEeCCceec
Q psy3337 235 QNKRGISYVQQWDVDSGRLRLAR-E---MKES-LSALAVRDDGRFVAVGTMFTGSVFVYIAFSLQMC 296 (297)
Q Consensus 235 ~~g~~d~~i~~wd~~~~~~~~~~-~---~~~~-v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~~~~~ 296 (297)
.|+.|++||+.+++.+..+ . .|.. |.+++|+ ++.+|++++. |+.|++||+.+++.+
T Consensus 227 ----~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~-d~~i~~wd~~~~~~~ 287 (615)
T 1pgu_A 227 ----SDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGA-DATIRVWDVTTSKCV 287 (615)
T ss_dssp ----TTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEET-TSEEEEEETTTTEEE
T ss_pred ----CCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcC-CCcEEEEECCCCcEE
Confidence 4999999999999999988 4 5555 9999999 9999999999 999999999987754
No 89
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.96 E-value=4.4e-27 Score=196.37 Aligned_cols=231 Identities=11% Similarity=0.115 Sum_probs=174.7
Q ss_pred cceeeeCCCccEEEeccCCceeeEEEeeEEeeccccccccCCCCchhhhhhcccccchhhhhccCCCcccccccCCCCCC
Q psy3337 2 NCDVHSNGKNIYVVAGQENSNQLYKITAEFTQMNGVVKSKESNNTADTIVRKRKEKDKENAKQKGGKKEKSNEKGKNKKD 81 (297)
Q Consensus 2 ~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (297)
+|..| +++++|++|+.|+.+++|++............... -....-.+
T Consensus 22 ~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~-----------v~~~~~~~-------------------- 69 (313)
T 3odt_A 22 RDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGF-----------LNSVCYDS-------------------- 69 (313)
T ss_dssp EEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSC-----------EEEEEEET--------------------
T ss_pred EEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCcc-----------EEEEEECC--------------------
Confidence 45556 77889999999999999998654322100000000 00000000
Q ss_pred CCCCCCCcCCCCCCCceEEE-EeeC---CCeEEEEecCCCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCeeeEEecc
Q psy3337 82 KIEDPPILNSIDSKEKNLRF-GFKT---FDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEA 157 (297)
Q Consensus 82 ~~~~~~~l~~~~~~d~~i~~-~~~~---~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~ 157 (297)
..-+..+++.|+.+++ ++.. ++.+..+. +|...|.+++| ++++|++++.|+.|++|| .++.+..+..
T Consensus 70 ----~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~ 140 (313)
T 3odt_A 70 ----EKELLLFGGKDTMINGVPLFATSGEDPLYTLI-GHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQA 140 (313)
T ss_dssp ----TTTEEEEEETTSCEEEEETTCCTTSCC-CEEC-CCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEEC
T ss_pred ----CCCEEEEecCCCeEEEEEeeecCCCCcccchh-hcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEeccc
Confidence 0011457788999998 6544 35566676 99999999999 577999999999999999 6778888999
Q ss_pred ccCCeeEEEEcc-CCCEEEEEeCCCcEEEEEcCCCceeeeeec-cCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCccc
Q psy3337 158 HSKEIDDVDFSI-SGEQIVSIAKDGKAFVWNSKNGSLSKELKW-NTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQ 235 (297)
Q Consensus 158 ~~~~v~~~~~sp-~~~~l~s~~~d~~v~lwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~ 235 (297)
|...+.++.|+| ++.+|++++.|+.|++|| .++....+.. +. ..+..++|+|++. +++
T Consensus 141 ~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~----------~~i~~~~~~~~~~-~~~------- 200 (313)
T 3odt_A 141 HNASVWDAKVVSFSENKFLTASADKTIKLWQ--NDKVIKTFSGIHN----------DVVRHLAVVDDGH-FIS------- 200 (313)
T ss_dssp CSSCEEEEEEEETTTTEEEEEETTSCEEEEE--TTEEEEEECSSCS----------SCEEEEEEEETTE-EEE-------
T ss_pred CCCceeEEEEccCCCCEEEEEECCCCEEEEe--cCceEEEEeccCc----------ccEEEEEEcCCCe-EEE-------
Confidence 999999999998 899999999999999999 4455555554 22 1233577899998 766
Q ss_pred ccCCCCeEEEEeCCCCceEEEeccCCC-eEEEEEcCCCCEEEEEecCCCeEEEEEeCCceec
Q psy3337 236 NKRGISYVQQWDVDSGRLRLAREMKES-LSALAVRDDGRFVAVGTMFTGSVFVYIAFSLQMC 296 (297)
Q Consensus 236 ~g~~d~~i~~wd~~~~~~~~~~~~~~~-v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~~~~~ 296 (297)
++.++.|++||+++++++..+..|.. |.+++|+|++ .|++++. ||.|++||+.+++.+
T Consensus 201 -~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~-dg~v~iwd~~~~~~~ 259 (313)
T 3odt_A 201 -CSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-DIVSCGE-DRTVRIWSKENGSLK 259 (313)
T ss_dssp -EETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-CEEEEET-TSEEEEECTTTCCEE
T ss_pred -ccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCC-CEEEEec-CCEEEEEECCCCcee
Confidence 44599999999999999999988777 9999999999 5888999 999999999988754
No 90
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.96 E-value=1.4e-27 Score=206.88 Aligned_cols=194 Identities=12% Similarity=0.097 Sum_probs=133.7
Q ss_pred CCCCCCCceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCC-CEEEEEcCCCcEEEEeCCCCeeeEE-------------
Q psy3337 90 NSIDSKEKNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNG-DLMVTGGTDGHLRLWSFPKMKPLLH------------- 154 (297)
Q Consensus 90 ~~~~~~d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g-~~l~s~~~d~~i~iwd~~~~~~~~~------------- 154 (297)
..+++.|++|+| |+.++..+..+. +|...|.+++|+|++ ++|++|+.|++|++||+++++....
T Consensus 159 las~s~D~tv~~Wd~~~~~~~~~~~-~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~ 237 (393)
T 4gq1_A 159 IASVGDDCTLIIWRLTDEGPILAGY-PLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLL 237 (393)
T ss_dssp EEEEETTSEEEEEEEETTEEEEEEE-ECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSE
T ss_pred EEEEECCCeEEEEECCCCceeeeec-CCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEE
Confidence 568899999999 888888888887 888999999999987 5899999999999999987653322
Q ss_pred ------------eccccCCeeEEEEc-cCCCEEEEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEE--------eee
Q psy3337 155 ------------IEAHSKEIDDVDFS-ISGEQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFK--------RCR 213 (297)
Q Consensus 155 ------------~~~~~~~v~~~~~s-p~~~~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~--------~~~ 213 (297)
..+|...|.++.|+ |+++.|++++.|+++++||+..+.....+..+........+. ...
T Consensus 238 s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 317 (393)
T 4gq1_A 238 TLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPS 317 (393)
T ss_dssp EEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCC
T ss_pred ecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCc
Confidence 23577889999987 799999999999999999998877666655443110000000 000
Q ss_pred eeeeeeCC--CCeEEEEeccCcccccCCCCeEEEEeCCCCceEEEeccCCC-eEEEEEcCCCCEEEEEecCCCeEEEEEe
Q psy3337 214 YGLVEDSP--KRSRLFTLANPLAQNKRGISYVQQWDVDSGRLRLAREMKES-LSALAVRDDGRFVAVGTMFTGSVFVYIA 290 (297)
Q Consensus 214 ~~~~~~s~--~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~-v~~~~~s~dg~~l~~~~~~dg~i~vwd~ 290 (297)
.....++| ++.++++ |+.|+.|++||+.++++...+..+.. |.+++|+|||++|++++. +.+.+|.+
T Consensus 318 ~~~~~~~~~~~~~~~~s--------gs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~--~Gv~lvrL 387 (393)
T 4gq1_A 318 LLGACPHPRYMDYFATA--------HSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATE--GSVLLTRL 387 (393)
T ss_dssp SSCCEECSSCTTEEEEE--------ETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEES--SEEEEEEE
T ss_pred ceeEEEccCCCCEEEEE--------ECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeC--CCeEEEEE
Confidence 01122333 3333333 67799999999999887776666555 999999999999999995 55777776
Q ss_pred CCce
Q psy3337 291 FSLQ 294 (297)
Q Consensus 291 ~~~~ 294 (297)
....
T Consensus 388 ~gf~ 391 (393)
T 4gq1_A 388 MGFT 391 (393)
T ss_dssp GGGC
T ss_pred eCcc
Confidence 5543
No 91
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.96 E-value=2.9e-27 Score=231.94 Aligned_cols=245 Identities=16% Similarity=0.165 Sum_probs=189.6
Q ss_pred cceeeeCCCccEEEeccCCceeeEEEeeEEeeccccccccCCCCchhhhhhcc-cccchhhhhccCCCcccccccCCCCC
Q psy3337 2 NCDVHSNGKNIYVVAGQENSNQLYKITAEFTQMNGVVKSKESNNTADTIVRKR-KEKDKENAKQKGGKKEKSNEKGKNKK 80 (297)
Q Consensus 2 ~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (297)
+|..|+++|++|++|+.|+.++||++.......... ++... ....
T Consensus 619 ~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~------------~h~~~v~~~~---------------------- 664 (1249)
T 3sfz_A 619 YHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIK------------AHEDEVLCCA---------------------- 664 (1249)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEEC------------CCSSCEEEEE----------------------
T ss_pred EEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEec------------cCCCCEEEEE----------------------
Confidence 566799999999999999999999986543211000 00000 0000
Q ss_pred CCCCCCCCcCCCCCCCceEEE-EeeCCCeEEEEecCCCCcEEEEEEec--CCCEEEEEcCCCcEEEEeCCCCeeeEEecc
Q psy3337 81 DKIEDPPILNSIDSKEKNLRF-GFKTFDSVQTVFAGSESLQRVVRLSR--NGDLMVTGGTDGHLRLWSFPKMKPLLHIEA 157 (297)
Q Consensus 81 ~~~~~~~~l~~~~~~d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~--~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~ 157 (297)
...+ .-+..+++.|++|++ +..+++.+..+. +|...|.+++|+| ++.++++|+.|+.|++||+.+++.+..+.+
T Consensus 665 -~s~~-~~~l~s~~~d~~v~vwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~ 741 (1249)
T 3sfz_A 665 -FSSD-DSYIATCSADKKVKIWDSATGKLVHTYD-EHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFG 741 (1249)
T ss_dssp -ECTT-SSEEEEEETTSEEEEEETTTCCEEEEEE-CCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECC
T ss_pred -EecC-CCEEEEEeCCCeEEEEECCCCceEEEEc-CCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecC
Confidence 0000 112457788999999 999999999998 9999999999999 456899999999999999999999999999
Q ss_pred ccCCeeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeeccC----------------------CCCceEEEE-----
Q psy3337 158 HSKEIDDVDFSISGEQIVSIAKDGKAFVWNSKNGSLSKELKWNT----------------------PDNIKYLFK----- 210 (297)
Q Consensus 158 ~~~~v~~~~~sp~~~~l~s~~~d~~v~lwd~~~~~~~~~~~~~~----------------------~~~~~~~~~----- 210 (297)
|...|.+++|+|++++|++++.|+.|++||+.++.....+.... |++..+...
T Consensus 742 h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v 821 (1249)
T 3sfz_A 742 HTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKV 821 (1249)
T ss_dssp CSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEE
T ss_pred CCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcE
Confidence 99999999999999999999999999999998887665543211 111111000
Q ss_pred ------------------eeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCCCceEEEeccCCC-eEEEEEcCC
Q psy3337 211 ------------------RCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSGRLRLAREMKES-LSALAVRDD 271 (297)
Q Consensus 211 ------------------~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~-v~~~~~s~d 271 (297)
...+..++|+|++..+++ ++.++.|++||+.+++.+..+.+|.. |.+++|+|+
T Consensus 822 ~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~--------~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spd 893 (1249)
T 3sfz_A 822 LLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVI--------ALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPD 893 (1249)
T ss_dssp EEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEE--------ECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTT
T ss_pred EEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEE--------EeCCCeEEEEEcCCCceeeecCCCccceEEEEECCC
Confidence 112334667777777776 55699999999999999999999887 999999999
Q ss_pred CCEEEEEecCCCeEEEEEeCC
Q psy3337 272 GRFVAVGTMFTGSVFVYIAFS 292 (297)
Q Consensus 272 g~~l~~~~~~dg~i~vwd~~~ 292 (297)
|.+|++++. ||.|++||+.+
T Consensus 894 g~~l~s~s~-dg~v~vw~~~~ 913 (1249)
T 3sfz_A 894 GSSFLTASD-DQTIRVWETKK 913 (1249)
T ss_dssp SSEEEEEET-TSCEEEEEHHH
T ss_pred CCEEEEEeC-CCeEEEEEccc
Confidence 999999999 99999999764
No 92
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.96 E-value=1.1e-27 Score=201.39 Aligned_cols=183 Identities=13% Similarity=0.165 Sum_probs=148.7
Q ss_pred CCCCCCCceEEE-EeeCCC--eEEEEecCCCCcEEEEEEec--CCCEEEEEcCCCcEEEEeCCCC--eeeEEeccccCCe
Q psy3337 90 NSIDSKEKNLRF-GFKTFD--SVQTVFAGSESLQRVVRLSR--NGDLMVTGGTDGHLRLWSFPKM--KPLLHIEAHSKEI 162 (297)
Q Consensus 90 ~~~~~~d~~i~~-~~~~~~--~~~~~~~~h~~~v~~~~~s~--~g~~l~s~~~d~~i~iwd~~~~--~~~~~~~~~~~~v 162 (297)
..+++.|++|++ ++.++. .+..+. +|...|++++|+| ++++|++|+.|++|++||++++ +.+..+.+|...|
T Consensus 28 lasgs~D~~v~lwd~~~~~~~~~~~l~-gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V 106 (316)
T 3bg1_A 28 LATCSSDRSVKIFDVRNGGQILIADLR-GHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSV 106 (316)
T ss_dssp EEEEETTTEEEEEEEETTEEEEEEEEE-CCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCC
T ss_pred EEEEeCCCeEEEEEecCCCcEEEEEEc-CCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCce
Confidence 567899999999 888775 355666 9999999999986 4899999999999999999876 3567788999999
Q ss_pred eEEEEccC--CCEEEEEeCCCcEEEEEcCCCce---eeeeeccCCCCceEEEEeeeeeeeeeCCCC--------------
Q psy3337 163 DDVDFSIS--GEQIVSIAKDGKAFVWNSKNGSL---SKELKWNTPDNIKYLFKRCRYGLVEDSPKR-------------- 223 (297)
Q Consensus 163 ~~~~~sp~--~~~l~s~~~d~~v~lwd~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~-------------- 223 (297)
.+++|+|+ +.+|++++.|++|++||++.+.. ...+..|.. .+..++|+|+.
T Consensus 107 ~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~----------~v~~~~~~~~~~~~~~~~~~~~~~~ 176 (316)
T 3bg1_A 107 NSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTI----------GCNAVSWAPAVVPGSLIDHPSGQKP 176 (316)
T ss_dssp CEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSS----------CBCCCEECCCCCC------CCSCCC
T ss_pred EEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccC----------CcceEEEccccCCccccccccccCc
Confidence 99999997 78999999999999999986532 223333321 12346677762
Q ss_pred ---eEEEEeccCcccccCCCCeEEEEeCCCC---ceEEEeccCCC-eEEEEEcCCC----CEEEEEecCCCeEEEEEeCC
Q psy3337 224 ---SRLFTLANPLAQNKRGISYVQQWDVDSG---RLRLAREMKES-LSALAVRDDG----RFVAVGTMFTGSVFVYIAFS 292 (297)
Q Consensus 224 ---~~l~~~~~~~~~~g~~d~~i~~wd~~~~---~~~~~~~~~~~-v~~~~~s~dg----~~l~~~~~~dg~i~vwd~~~ 292 (297)
.+|++ |+.|+.|++||++.. +++..+.+|.. |.+++|+|++ .+|++++. |++|++||+.+
T Consensus 177 ~~~~~l~s--------gs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~-D~~v~iw~~~~ 247 (316)
T 3bg1_A 177 NYIKRFAS--------GGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQ-DGRVFIWTCDD 247 (316)
T ss_dssp CCCCBEEC--------CBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEET-TCEEEEEECSS
T ss_pred cccceEEE--------ecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcC-CCeEEEEEccC
Confidence 44554 777999999999764 46677888877 9999999987 88999999 99999999876
No 93
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.96 E-value=3.5e-27 Score=204.69 Aligned_cols=185 Identities=16% Similarity=0.230 Sum_probs=158.0
Q ss_pred CCCCCCceEEE-EeeCC----CeEEEEecCCCCcEEEEEEec-CCCEEEEEcCCCcEEEEeCCCC-------eeeEEecc
Q psy3337 91 SIDSKEKNLRF-GFKTF----DSVQTVFAGSESLQRVVRLSR-NGDLMVTGGTDGHLRLWSFPKM-------KPLLHIEA 157 (297)
Q Consensus 91 ~~~~~d~~i~~-~~~~~----~~~~~~~~~h~~~v~~~~~s~-~g~~l~s~~~d~~i~iwd~~~~-------~~~~~~~~ 157 (297)
.+++.|+.|++ ++... ..+..+. +|...|++++|+| ++++|++|+.|+.|++||+.++ +++..+.+
T Consensus 51 ~~~~~~g~i~v~~~~~~~~~~~~~~~~~-~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~ 129 (402)
T 2aq5_A 51 CEASGGGAFLVLPLGKTGRVDKNVPLVC-GHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEG 129 (402)
T ss_dssp BCCSSSCCEEEEETTCCEECCTTCCCBC-CCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEEC
T ss_pred EEEcCCCEEEEEECccCCCCCCCCceEe-cCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecC
Confidence 35788999999 76443 2334455 8999999999999 8999999999999999999887 66788999
Q ss_pred ccCCeeEEEEccCC-CEEEEEeCCCcEEEEEcCCCceeeee--eccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcc
Q psy3337 158 HSKEIDDVDFSISG-EQIVSIAKDGKAFVWNSKNGSLSKEL--KWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLA 234 (297)
Q Consensus 158 ~~~~v~~~~~sp~~-~~l~s~~~d~~v~lwd~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~ 234 (297)
|...|.+++|+|++ ++|++++.|+.|++||+++++.+..+ ..|. ..+..++|+|++.+|++++
T Consensus 130 h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~----------~~v~~~~~~~~~~~l~~~~---- 195 (402)
T 2aq5_A 130 HTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHP----------DTIYSVDWSRDGALICTSC---- 195 (402)
T ss_dssp CSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCC----------SCEEEEEECTTSSCEEEEE----
T ss_pred CCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCC----------CceEEEEECCCCCEEEEEe----
Confidence 99999999999998 69999999999999999999888887 4443 1234588999999999955
Q ss_pred cccCCCCeEEEEeCCCCceEEEe-ccCCC--eEEEEEcCCCCEEEEE---ecCCCeEEEEEeCCcee
Q psy3337 235 QNKRGISYVQQWDVDSGRLRLAR-EMKES--LSALAVRDDGRFVAVG---TMFTGSVFVYIAFSLQM 295 (297)
Q Consensus 235 ~~g~~d~~i~~wd~~~~~~~~~~-~~~~~--v~~~~~s~dg~~l~~~---~~~dg~i~vwd~~~~~~ 295 (297)
.|+.|++||+++++.+..+ ..|.. +.+++|+|++.+|++| +. |+.|++||+.+++.
T Consensus 196 ----~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~-d~~i~iwd~~~~~~ 257 (402)
T 2aq5_A 196 ----RDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMS-ERQVALWDTKHLEE 257 (402)
T ss_dssp ----TTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTC-CEEEEEEETTBCSS
T ss_pred ----cCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCC-CceEEEEcCccccC
Confidence 4999999999999998888 56654 8999999999999999 67 99999999988653
No 94
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.96 E-value=1.7e-27 Score=233.48 Aligned_cols=252 Identities=13% Similarity=0.143 Sum_probs=188.9
Q ss_pred cceeeeCCCccEEEeccCCceeeEEEeeEEeeccccccccCCCCchhhhhhcccccchhhhhccCCCcccccccCCCCCC
Q psy3337 2 NCDVHSNGKNIYVVAGQENSNQLYKITAEFTQMNGVVKSKESNNTADTIVRKRKEKDKENAKQKGGKKEKSNEKGKNKKD 81 (297)
Q Consensus 2 ~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (297)
+|+.|++++++|++++.|+.++||++.......... ++.... ..-..
T Consensus 661 ~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~------------~~~~~v---------------------~~~~~ 707 (1249)
T 3sfz_A 661 LCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYD------------EHSEQV---------------------NCCHF 707 (1249)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE------------CCSSCE---------------------EEEEE
T ss_pred EEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEc------------CCCCcE---------------------EEEEE
Confidence 466799999999999999999999986532210000 000000 00000
Q ss_pred CCCCCCCcCCCCCCCceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCeeeEEe-----
Q psy3337 82 KIEDPPILNSIDSKEKNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHI----- 155 (297)
Q Consensus 82 ~~~~~~~l~~~~~~d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~----- 155 (297)
.......+..+++.|+.|++ ++.+++.+..+. +|...|++++|+|++++|++++.|+.|++||+.+++....+
T Consensus 708 ~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~-~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~ 786 (1249)
T 3sfz_A 708 TNKSNHLLLATGSNDFFLKLWDLNQKECRNTMF-GHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRF 786 (1249)
T ss_dssp CSSSSCCEEEEEETTSCEEEEETTSSSEEEEEC-CCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCC
T ss_pred ecCCCceEEEEEeCCCeEEEEECCCcchhheec-CCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceeccccc
Confidence 01111223557889999999 999999999988 99999999999999999999999999999998766433222
Q ss_pred --------------------------------------------------ccccCCeeEEEEccCCCEEEEEeCCCcEEE
Q psy3337 156 --------------------------------------------------EAHSKEIDDVDFSISGEQIVSIAKDGKAFV 185 (297)
Q Consensus 156 --------------------------------------------------~~~~~~v~~~~~sp~~~~l~s~~~d~~v~l 185 (297)
.+|...|.+++|+|++.++++++.|+.|++
T Consensus 787 ~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~v 866 (1249)
T 3sfz_A 787 FLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVEL 866 (1249)
T ss_dssp C--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEE
T ss_pred ccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEE
Confidence 167788999999999999999999999999
Q ss_pred EEcCCCceeeeeeccCC---------CCceEEEE----------------------------------------------
Q psy3337 186 WNSKNGSLSKELKWNTP---------DNIKYLFK---------------------------------------------- 210 (297)
Q Consensus 186 wd~~~~~~~~~~~~~~~---------~~~~~~~~---------------------------------------------- 210 (297)
||+.++..+..+..|.. ++..+...
T Consensus 867 wd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 946 (1249)
T 3sfz_A 867 WNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGL 946 (1249)
T ss_dssp EETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSE
T ss_pred EEcCCCceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcce
Confidence 99999888777766541 11100000
Q ss_pred --------------eeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCCCceEEEeccCCC-eEEEEEcCCCCEE
Q psy3337 211 --------------RCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSGRLRLAREMKES-LSALAVRDDGRFV 275 (297)
Q Consensus 211 --------------~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~-v~~~~~s~dg~~l 275 (297)
...+..++++|++.++++ |+.++.|++||+.+++....+.+|.. |.+++|+|+|++|
T Consensus 947 ~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~--------g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l 1018 (1249)
T 3sfz_A 947 QLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAF--------GDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTL 1018 (1249)
T ss_dssp EEEEESSCCEEEECCSCEEEEEECTTSSEEEE--------EETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCE
T ss_pred EEEecCcceEEEcccCcEEEEEEcCCCCEEEE--------EcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCCEE
Confidence 001234556666666666 55699999999999999988888877 9999999999999
Q ss_pred EEEecCCCeEEEEEeCCceec
Q psy3337 276 AVGTMFTGSVFVYIAFSLQMC 296 (297)
Q Consensus 276 ~~~~~~dg~i~vwd~~~~~~~ 296 (297)
++++. ||.|++||+.+++.+
T Consensus 1019 ~s~~~-dg~i~vwd~~~~~~~ 1038 (1249)
T 3sfz_A 1019 ISSSE-DSVIQVWNWQTGDYV 1038 (1249)
T ss_dssp EEECS-SSBEEEEETTTTEEE
T ss_pred EEEcC-CCEEEEEECCCCceE
Confidence 99999 999999999987654
No 95
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.96 E-value=8.9e-27 Score=199.10 Aligned_cols=236 Identities=13% Similarity=0.130 Sum_probs=167.6
Q ss_pred CcceeeeCCCccEEEeccCCceeeEEEeeEEeeccccccccCCCCchhhhhhcccccchhhhhccCCCcccccccCCCCC
Q psy3337 1 MNCDVHSNGKNIYVVAGQENSNQLYKITAEFTQMNGVVKSKESNNTADTIVRKRKEKDKENAKQKGGKKEKSNEKGKNKK 80 (297)
Q Consensus 1 ~~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (297)
++|+.|+++|.+|++|+.| .++||++............ .. ...
T Consensus 22 V~~v~fs~dg~~la~g~~~-~~~iw~~~~~~~~~~~~~~-~~-----------------------------------~~~ 64 (355)
T 3vu4_A 22 VTDYEFNQDQSCLILSTLK-SFEIYNVHPVAHIMSQEMR-HL-----------------------------------SKV 64 (355)
T ss_dssp CCEEEECTTSSEEEEECSS-EEEEEEETTEEEEEEEECS-CC-----------------------------------CEE
T ss_pred eEEEEECCCCCEEEEEcCC-EEEEEecCCcceeeeeecC-Ce-----------------------------------EEE
Confidence 4677899998877776655 6889998654432100000 00 000
Q ss_pred CCCCCCCCcCCCCCCCceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCC------------------------------
Q psy3337 81 DKIEDPPILNSIDSKEKNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNG------------------------------ 129 (297)
Q Consensus 81 ~~~~~~~~l~~~~~~d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g------------------------------ 129 (297)
........+..+++.|++|++ |..+++.+..+. |...|.+++|+++.
T Consensus 65 ~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~--~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~ 142 (355)
T 3vu4_A 65 RMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIK--VDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGV 142 (355)
T ss_dssp EECTTSSEEEEECSSTTEEEEEETTTTEEEEEEE--CSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEE
T ss_pred EEcCCCCEEEEEECCccEEEEEECCCCcEEEEEE--CCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCce
Confidence 000111122345677789999 888888877774 55678888887652
Q ss_pred -----CEEEE--EcCCCcEEEEeCCCCe---------------e-eEEeccccCCeeEEEEccCCCEEEEEeCCCc-EEE
Q psy3337 130 -----DLMVT--GGTDGHLRLWSFPKMK---------------P-LLHIEAHSKEIDDVDFSISGEQIVSIAKDGK-AFV 185 (297)
Q Consensus 130 -----~~l~s--~~~d~~i~iwd~~~~~---------------~-~~~~~~~~~~v~~~~~sp~~~~l~s~~~d~~-v~l 185 (297)
.+++. |+.||.|++||+.+++ + +..+.+|...|.+++|+|++++|++++.|++ |++
T Consensus 143 ~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~i 222 (355)
T 3vu4_A 143 CEFSNGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRV 222 (355)
T ss_dssp EEEETTEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEE
T ss_pred EEEEccEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEE
Confidence 23444 5789999999998765 2 6788999999999999999999999999998 999
Q ss_pred EEcCCCceeeeee-c-cCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCCCce--EEE-----
Q psy3337 186 WNSKNGSLSKELK-W-NTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSGRL--RLA----- 256 (297)
Q Consensus 186 wd~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~--~~~----- 256 (297)
||+++++.+..+. + |. ..+..++|+|++.+|++++ .|+.|++||+..+.. ...
T Consensus 223 wd~~~~~~~~~~~~g~h~----------~~v~~~~~s~~~~~l~s~s--------~d~~v~iw~~~~~~~~~~~~~~~~~ 284 (355)
T 3vu4_A 223 FKTEDGVLVREFRRGLDR----------ADVVDMKWSTDGSKLAVVS--------DKWTLHVFEIFNDQDNKRHALKGWI 284 (355)
T ss_dssp EETTTCCEEEEEECTTCC----------SCEEEEEECTTSCEEEEEE--------TTCEEEEEESSCCSCCCSEETTTTE
T ss_pred EECCCCcEEEEEEcCCCC----------CcEEEEEECCCCCEEEEEE--------CCCEEEEEEccCCCCccccccccee
Confidence 9999999998887 3 43 2344588999999999955 499999999976421 111
Q ss_pred ---------------ecc--CCCeEEEEEcCCCCEEEEEecCCCeEEEEEeCCce
Q psy3337 257 ---------------REM--KESLSALAVRDDGRFVAVGTMFTGSVFVYIAFSLQ 294 (297)
Q Consensus 257 ---------------~~~--~~~v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~~~ 294 (297)
+.. ......++|++||++|++++. ||.+++|++..++
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~-dg~~~~~~~~~~~ 338 (355)
T 3vu4_A 285 NMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPH-TRMIETFKVVFDD 338 (355)
T ss_dssp ECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETT-TTEEEEEEEEEET
T ss_pred eccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeC-CCeEEEEEEEcCC
Confidence 111 111467899999999999999 9999999987644
No 96
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.95 E-value=4.2e-27 Score=223.24 Aligned_cols=164 Identities=13% Similarity=0.120 Sum_probs=136.1
Q ss_pred CCCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCeeeEEeccccCCeeEEEEccCCCEEEEEeCCCcEEEEEcCCCcee
Q psy3337 115 GSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAKDGKAFVWNSKNGSLS 194 (297)
Q Consensus 115 ~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~d~~v~lwd~~~~~~~ 194 (297)
.|...|.+++|+| |++|++++.|++|++||+.+++.+..+. |...|++++|+|++++|++|+.||+|++||++++...
T Consensus 56 ~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~ 133 (902)
T 2oaj_A 56 EDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKVLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLS 133 (902)
T ss_dssp SSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCSEEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEE
T ss_pred CCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCcEEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccc
Confidence 5778899999999 8899999999999999999999888886 7788999999999999999999999999999887653
Q ss_pred eeeec-------cCCCCceEEEEeeeeeeeeeCCCC-eEEEEeccCcccccCCCCeEEEEeCCCCceEEEeccC------
Q psy3337 195 KELKW-------NTPDNIKYLFKRCRYGLVEDSPKR-SRLFTLANPLAQNKRGISYVQQWDVDSGRLRLAREMK------ 260 (297)
Q Consensus 195 ~~~~~-------~~~~~~~~~~~~~~~~~~~~s~~~-~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~------ 260 (297)
.+.. ..+. .....+..++|+|++ ..+++ |+.|+.| +||+++++++..+..+
T Consensus 134 -~~~i~~~~~~~~~~~-----~h~~~V~sl~~sp~~~~~l~~--------g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~ 198 (902)
T 2oaj_A 134 -SFKLDNLQKSSFFPA-----ARLSPIVSIQWNPRDIGTVLI--------SYEYVTL-TYSLVENEIKQSFIYELPPFAP 198 (902)
T ss_dssp -EEEECCHHHHHTCSS-----SCCCCCCEEEEETTEEEEEEE--------ECSSCEE-EEETTTTEEEEEECCCBCTTCC
T ss_pred -cceeccccccccccc-----cCCCCeEEEEEccCCCCEEEE--------EeCCCcE-EEECCCCceEEEEecccCCcCC
Confidence 2111 0000 011245568899974 56666 5569999 9999999988888765
Q ss_pred -------------CCeEEEEEcCCCCEEEEEecCCCeEEEEEeCCceec
Q psy3337 261 -------------ESLSALAVRDDGRFVAVGTMFTGSVFVYIAFSLQMC 296 (297)
Q Consensus 261 -------------~~v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~~~~~ 296 (297)
..|.+++|+|+|.+|++++. ||.|++||+.+++++
T Consensus 199 ~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~-Dg~i~lWd~~~g~~~ 246 (902)
T 2oaj_A 199 GGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHE-DNSLVFWDANSGHMI 246 (902)
T ss_dssp CSTTCCCTTSCBCCCEEEEEECTTSSEEEEEET-TCCEEEEETTTCCEE
T ss_pred CcccccccccccCCCeEEEEEcCCCCEEEEEEC-CCeEEEEECCCCcEE
Confidence 34999999999999999999 999999999887754
No 97
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.95 E-value=7.8e-27 Score=198.96 Aligned_cols=179 Identities=9% Similarity=0.023 Sum_probs=136.1
Q ss_pred EEEecCCCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCeeeEEeccccCCeeEEEE--ccCCCEEEEEeCCCcEEEEE
Q psy3337 110 QTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDF--SISGEQIVSIAKDGKAFVWN 187 (297)
Q Consensus 110 ~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~--sp~~~~l~s~~~d~~v~lwd 187 (297)
..+. +|...|++++|+|++++|++++.|+.|++||+.+++.+. +..|...|.+++| +|++.+|++++.|+.|++||
T Consensus 80 ~~~~-~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd 157 (368)
T 3mmy_A 80 KAQQ-MHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWD 157 (368)
T ss_dssp EEEE-ECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEEC
T ss_pred EEec-cccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEE
Confidence 4455 899999999999999999999999999999999988765 5569999999999 89999999999999999999
Q ss_pred cCCCceeeeeeccCCCCceEEEEe------e--------------------------eeeeeeeCCCCeEEEEeccCccc
Q psy3337 188 SKNGSLSKELKWNTPDNIKYLFKR------C--------------------------RYGLVEDSPKRSRLFTLANPLAQ 235 (297)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~------~--------------------------~~~~~~~s~~~~~l~~~~~~~~~ 235 (297)
+++++.+..+..+.... ...+.. . ....+.+.++... ....++
T Consensus 158 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 232 (368)
T 3mmy_A 158 TRSSNPMMVLQLPERCY-CADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQN----KPTGFA 232 (368)
T ss_dssp SSCSSCSEEEECSSCEE-EEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTS----CEEEEE
T ss_pred CCCCcEEEEEecCCCce-EEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCC----CCCeEE
Confidence 99998887776553110 000000 0 0001111111110 000144
Q ss_pred ccCCCCeEEEEeCCCC---ceEEEeccCC-------------CeEEEEEcCCCCEEEEEecCCCeEEEEEeCCceec
Q psy3337 236 NKRGISYVQQWDVDSG---RLRLAREMKE-------------SLSALAVRDDGRFVAVGTMFTGSVFVYIAFSLQMC 296 (297)
Q Consensus 236 ~g~~d~~i~~wd~~~~---~~~~~~~~~~-------------~v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~~~~~ 296 (297)
+++.|+.|++||++.. +.+..+..|. .|.+++|+|++++|++++. ||.|++||+.+++++
T Consensus 233 ~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~-dg~i~iwd~~~~~~~ 308 (368)
T 3mmy_A 233 LGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGS-DGRFSFWDKDARTKL 308 (368)
T ss_dssp EEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEET-TSCEEEEETTTTEEE
T ss_pred EecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEcc-CCeEEEEECCCCcEE
Confidence 5777999999999986 5566666665 4999999999999999999 999999999988765
No 98
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.95 E-value=1.5e-26 Score=202.95 Aligned_cols=188 Identities=15% Similarity=0.183 Sum_probs=143.7
Q ss_pred CCCCCceEEE-Eee-CCCeEEEE------ecCCCCcEEEEEEecCC-CEEEEEcCCCcEEEEeCCCCee----eEEeccc
Q psy3337 92 IDSKEKNLRF-GFK-TFDSVQTV------FAGSESLQRVVRLSRNG-DLMVTGGTDGHLRLWSFPKMKP----LLHIEAH 158 (297)
Q Consensus 92 ~~~~d~~i~~-~~~-~~~~~~~~------~~~h~~~v~~~~~s~~g-~~l~s~~~d~~i~iwd~~~~~~----~~~~~~~ 158 (297)
++ .|+.|++ ++. .++.+..+ ..+|...|++++|+|++ ++|++|+.|+.|++||+++++. +..+..|
T Consensus 194 s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 272 (447)
T 3dw8_B 194 SA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEP 272 (447)
T ss_dssp EE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC
T ss_pred Ee-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccC
Confidence 45 6999999 777 34444432 23899999999999998 9999999999999999998886 6788888
Q ss_pred cC------------CeeEEEEccCCCEEEEEeCCCcEEEEEcCC-CceeeeeeccCCCCceE--EEE-ee--eeeeeeeC
Q psy3337 159 SK------------EIDDVDFSISGEQIVSIAKDGKAFVWNSKN-GSLSKELKWNTPDNIKY--LFK-RC--RYGLVEDS 220 (297)
Q Consensus 159 ~~------------~v~~~~~sp~~~~l~s~~~d~~v~lwd~~~-~~~~~~~~~~~~~~~~~--~~~-~~--~~~~~~~s 220 (297)
.. .|.+++|+|++++|++++. +.|++||+++ ++.+..+..|....... .+. .+ ....++|+
T Consensus 273 ~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s 351 (447)
T 3dw8_B 273 EDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWN 351 (447)
T ss_dssp -----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEEC
T ss_pred CCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeeccccccccccccccccccccceEEEEC
Confidence 76 8999999999999999999 9999999997 88888887764211000 000 00 01127799
Q ss_pred CCCeEEEEeccCcccccCCCCeEEEEeCCCCceEEEe---------------------------------ccCCCeEEEE
Q psy3337 221 PKRSRLFTLANPLAQNKRGISYVQQWDVDSGRLRLAR---------------------------------EMKESLSALA 267 (297)
Q Consensus 221 ~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~---------------------------------~~~~~v~~~~ 267 (297)
|++.+|++ |+.|+.|++||+.+++.+... .....|..++
T Consensus 352 ~~~~~l~s--------~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 423 (447)
T 3dw8_B 352 GSDSVVMT--------GSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTA 423 (447)
T ss_dssp TTSSEEEE--------ECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEE
T ss_pred CCCCEEEE--------eccCCEEEEEEcCCCcceeeeecccccccccccCCccccccCCcccccccccccccCCceeEEE
Confidence 99999988 555999999999998776422 1122388999
Q ss_pred EcCCCCEEEEEecCCCeEEEEEeC
Q psy3337 268 VRDDGRFVAVGTMFTGSVFVYIAF 291 (297)
Q Consensus 268 ~s~dg~~l~~~~~~dg~i~vwd~~ 291 (297)
|+|++.+|++++. + .+++|..+
T Consensus 424 ~~p~~~~la~~~~-~-~~~~~~~~ 445 (447)
T 3dw8_B 424 WHPKENIIAVATT-N-NLYIFQDK 445 (447)
T ss_dssp ECSSSSEEEEECS-S-CEEEEECC
T ss_pred ECCCCCEEEEEec-c-eeeeeccc
Confidence 9999999999986 5 58888753
No 99
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.95 E-value=1.7e-26 Score=203.05 Aligned_cols=179 Identities=20% Similarity=0.310 Sum_probs=153.8
Q ss_pred CCCCCCCceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCeeeEEeccccCCeeEEEEc
Q psy3337 90 NSIDSKEKNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFS 168 (297)
Q Consensus 90 ~~~~~~d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s 168 (297)
..+++.|++|++ ++.+++.+..+. +|...|.+++| ++++|++|+.|+.|++||+++++.+..+.+|...|.+++|
T Consensus 212 l~s~s~dg~i~~wd~~~~~~~~~~~-~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~- 287 (445)
T 2ovr_B 212 VVSGSRDATLRVWDIETGQCLHVLM-GHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF- 287 (445)
T ss_dssp EEEEETTSEEEEEESSSCCEEEEEE-CCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE-
T ss_pred EEEEeCCCEEEEEECCCCcEEEEEc-CCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE-
Confidence 457888999999 999999998888 99999999999 7889999999999999999999999999999999999999
Q ss_pred cCCCEEEEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeC
Q psy3337 169 ISGEQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDV 248 (297)
Q Consensus 169 p~~~~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~ 248 (297)
++.++++++.|+.|++||+++++.+..+..|... . ..+ .+++.++++ |+.|+.|++||+
T Consensus 288 -~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~----v------~~~--~~~~~~l~~--------~~~dg~i~vwd~ 346 (445)
T 2ovr_B 288 -DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSL----T------SGM--ELKDNILVS--------GNADSTVKIWDI 346 (445)
T ss_dssp -CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSC----E------EEE--EEETTEEEE--------EETTSCEEEEET
T ss_pred -CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCccc----E------EEE--EEeCCEEEE--------EeCCCeEEEEEC
Confidence 7889999999999999999999988888766422 1 112 334667777 455999999999
Q ss_pred CCCceEEEecc---CCC-eEEEEEcCCCCEEEEEecCCCeEEEEEeCCceec
Q psy3337 249 DSGRLRLAREM---KES-LSALAVRDDGRFVAVGTMFTGSVFVYIAFSLQMC 296 (297)
Q Consensus 249 ~~~~~~~~~~~---~~~-v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~~~~~ 296 (297)
++++++..+.. |.. |.+++|+ +.+|++|+. ||.|++||+.+++.+
T Consensus 347 ~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~-dg~v~iwd~~~~~~~ 395 (445)
T 2ovr_B 347 KTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSD-DGTVKLWDLKTGEFI 395 (445)
T ss_dssp TTCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEET-TSEEEEEETTTCCEE
T ss_pred CCCcEEEEEccCCCCCCCEEEEEEC--CCEEEEEeC-CCeEEEEECCCCcee
Confidence 99999998875 444 9999995 689999999 999999999988764
No 100
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.95 E-value=1.8e-26 Score=202.43 Aligned_cols=177 Identities=18% Similarity=0.296 Sum_probs=153.3
Q ss_pred CCCCCCCceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCeee---EEeccccCCeeEE
Q psy3337 90 NSIDSKEKNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPL---LHIEAHSKEIDDV 165 (297)
Q Consensus 90 ~~~~~~d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~---~~~~~~~~~v~~~ 165 (297)
..+++.|++|++ ++.+++.+..+. +|...|.+++|++ ++|++|+.|+.|++||+.+++.. ..+.+|...|.++
T Consensus 186 l~sg~~dg~i~vwd~~~~~~~~~~~-~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~ 262 (435)
T 1p22_A 186 IITGSSDSTVRVWDVNTGEMLNTLI-HHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVV 262 (435)
T ss_dssp EEEEETTSCEEEEESSSCCEEEEEC-CCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEE
T ss_pred EEEEcCCCeEEEEECCCCcEEEEEc-CCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEE
Confidence 567889999999 999999999988 9999999999974 59999999999999999887655 6778999999999
Q ss_pred EEccCCCEEEEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEE
Q psy3337 166 DFSISGEQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQ 245 (297)
Q Consensus 166 ~~sp~~~~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~ 245 (297)
+| ++++|++++.|+.|++||+++++.+..+..|... +..+.+ ++.++++ |+.|+.|++
T Consensus 263 ~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~----------v~~~~~--~~~~l~~--------g~~dg~i~i 320 (435)
T 1p22_A 263 DF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRG----------IACLQY--RDRLVVS--------GSSDNTIRL 320 (435)
T ss_dssp EE--ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSC----------EEEEEE--ETTEEEE--------EETTSCEEE
T ss_pred Ee--CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCc----------EEEEEe--CCCEEEE--------EeCCCeEEE
Confidence 99 6789999999999999999999999888876522 112344 4567777 455999999
Q ss_pred EeCCCCceEEEeccCCC-eEEEEEcCCCCEEEEEecCCCeEEEEEeCCce
Q psy3337 246 WDVDSGRLRLAREMKES-LSALAVRDDGRFVAVGTMFTGSVFVYIAFSLQ 294 (297)
Q Consensus 246 wd~~~~~~~~~~~~~~~-v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~~~ 294 (297)
||+++++++..+.+|.. |.+++| ++.+|++|+. ||.|++||+.+++
T Consensus 321 wd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg~~-dg~i~vwd~~~~~ 367 (435)
T 1p22_A 321 WDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAY-DGKIKVWDLVAAL 367 (435)
T ss_dssp EETTTCCEEEEECCCSSCEEEEEC--CSSEEEEEET-TSCEEEEEHHHHT
T ss_pred EECCCCCEEEEEeCCcCcEEEEEe--cCCEEEEEeC-CCcEEEEECCCCC
Confidence 99999999999998877 999999 7899999999 9999999987654
No 101
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.95 E-value=6.6e-26 Score=206.33 Aligned_cols=176 Identities=16% Similarity=0.188 Sum_probs=153.3
Q ss_pred ceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCC-EEEEEcCCCcEEEEeCCCCeeeEEeccccC---CeeEEEEccC-
Q psy3337 97 KNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGD-LMVTGGTDGHLRLWSFPKMKPLLHIEAHSK---EIDDVDFSIS- 170 (297)
Q Consensus 97 ~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~-~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~---~v~~~~~sp~- 170 (297)
+.|++ + +++.+..+. +|...|.+++|+|+++ +|++++.|+.|++||+.+++.+..+.+|.. .|.+++|+|+
T Consensus 142 ~~v~~~d--~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 218 (615)
T 1pgu_A 142 GVFISWD--SGNSLGEVS-GHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDS 218 (615)
T ss_dssp EEEEETT--TCCEEEECC-SCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTT
T ss_pred cEEEEEE--CCCcceeee-cCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCC
Confidence 56666 4 677788887 9999999999999997 899999999999999999999999999999 9999999999
Q ss_pred CCEEEEEeCCCcEEEEEcCCCceeeee-e---ccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEE
Q psy3337 171 GEQIVSIAKDGKAFVWNSKNGSLSKEL-K---WNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQW 246 (297)
Q Consensus 171 ~~~l~s~~~d~~v~lwd~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~w 246 (297)
+++|++++.|+.|++||+++++.+..+ . .|. ..+..++|+ ++.+|++++. |+.|++|
T Consensus 219 ~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~----------~~v~~~~~~-~~~~l~~~~~--------d~~i~~w 279 (615)
T 1pgu_A 219 GEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQ----------GGIFALSWL-DSQKFATVGA--------DATIRVW 279 (615)
T ss_dssp CCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCC----------SCEEEEEES-SSSEEEEEET--------TSEEEEE
T ss_pred CCEEEEEeCCCeEEEEECCCCCEeEEecccccccC----------CceEEEEEc-CCCEEEEEcC--------CCcEEEE
Confidence 999999999999999999999988887 3 343 123457789 9999998554 9999999
Q ss_pred eCCCCceEEEeccC-----CCeEEEEEcCCCCEEEEEecCCCeEEEEEeCCceec
Q psy3337 247 DVDSGRLRLAREMK-----ESLSALAVRDDGRFVAVGTMFTGSVFVYIAFSLQMC 296 (297)
Q Consensus 247 d~~~~~~~~~~~~~-----~~v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~~~~~ 296 (297)
|+.+++.+..+..+ ..+.++.|+ ++.+|++++. ||.|++||+.+++.+
T Consensus 280 d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~-~g~i~~~d~~~~~~~ 332 (615)
T 1pgu_A 280 DVTTSKCVQKWTLDKQQLGNQQVGVVAT-GNGRIISLSL-DGTLNFYELGHDEVL 332 (615)
T ss_dssp ETTTTEEEEEEECCTTCGGGCEEEEEEE-ETTEEEEEET-TSCEEEEETTEEEEE
T ss_pred ECCCCcEEEEEcCCCCcccCceeEEEeC-CCCeEEEEEC-CCCEEEEECCCCcEE
Confidence 99999999888876 338888886 8999999999 999999999887654
No 102
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.95 E-value=5e-27 Score=206.86 Aligned_cols=158 Identities=13% Similarity=0.088 Sum_probs=126.7
Q ss_pred CCCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCeeeEEeccccC-----CeeEEEEccCCCEEEEEeCCCcEEEEEcC
Q psy3337 115 GSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSK-----EIDDVDFSISGEQIVSIAKDGKAFVWNSK 189 (297)
Q Consensus 115 ~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~-----~v~~~~~sp~~~~l~s~~~d~~v~lwd~~ 189 (297)
.|...|.+++|||+|.+||+++.||.|++||... .+..+. |.. .|.+++|||||++|++|+.||+|++||+.
T Consensus 83 ~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~ 159 (588)
T 2j04_A 83 QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIR 159 (588)
T ss_dssp SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECC
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECC
Confidence 5688999999999999999999999999999544 666666 665 49999999999999999999999999998
Q ss_pred CCce-------eeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCCCce---EEEe-c
Q psy3337 190 NGSL-------SKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSGRL---RLAR-E 258 (297)
Q Consensus 190 ~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~---~~~~-~ 258 (297)
++.. +.++..+..... ..+..++|+|+| +++++ .|+.|++||+..++. ...+ .
T Consensus 160 ~~~l~~~~~i~l~ti~~~~~gh~------~~V~sVawSPdg--Laass--------~D~tVrlWd~~~~~~~~~~~tL~~ 223 (588)
T 2j04_A 160 KNSENTPEFYFESSIRLSDAGSK------DWVTHIVWYEDV--LVAAL--------SNNSVFSMTVSASSHQPVSRMIQN 223 (588)
T ss_dssp CCTTTCCCCEEEEEEECSCTTCC------CCEEEEEEETTE--EEEEE--------TTCCEEEECCCSSSSCCCEEEEEC
T ss_pred CCccccccceeeeeeeccccccc------ccEEEEEEcCCc--EEEEe--------CCCeEEEEECCCCccccceeeecc
Confidence 8752 455543332211 234458999999 66644 499999999998663 3556 3
Q ss_pred cCCC-eEEEEEcCCCCEEEEEecCCCeEEEEEeCCcee
Q psy3337 259 MKES-LSALAVRDDGRFVAVGTMFTGSVFVYIAFSLQM 295 (297)
Q Consensus 259 ~~~~-v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~~~~ 295 (297)
+|.. |.+++|+ |..|++++ +++|++||+.+++.
T Consensus 224 ~h~~~V~svaFs--g~~LASa~--~~tIkLWd~~~~~~ 257 (588)
T 2j04_A 224 ASRRKITDLKIV--DYKVVLTC--PGYVHKIDLKNYSI 257 (588)
T ss_dssp CCSSCCCCEEEE--TTEEEEEC--SSEEEEEETTTTEE
T ss_pred cccCcEEEEEEE--CCEEEEEe--CCeEEEEECCCCeE
Confidence 5654 9999999 68999887 79999999988765
No 103
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.95 E-value=9.5e-27 Score=204.16 Aligned_cols=178 Identities=12% Similarity=0.216 Sum_probs=148.2
Q ss_pred CCCCCCCceEEE-EeeCCCeE---EEEecCCCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCeeeEEeccccCCeeEE
Q psy3337 90 NSIDSKEKNLRF-GFKTFDSV---QTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDV 165 (297)
Q Consensus 90 ~~~~~~d~~i~~-~~~~~~~~---~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~ 165 (297)
..+++.|++|++ ++.++... ..+. +|...|.+++| ++++|++|+.|+.|++||+++++.+..+.+|...|.++
T Consensus 226 l~s~s~dg~i~vwd~~~~~~~~~~~~~~-~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~ 302 (435)
T 1p22_A 226 MVTCSKDRSIAVWDMASPTDITLRRVLV-GHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACL 302 (435)
T ss_dssp EEEEETTSCEEEEECSSSSCCEEEEEEC-CCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEE
T ss_pred EEEeeCCCcEEEEeCCCCCCceeeeEec-CCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEE
Confidence 567889999999 88887755 4444 99999999999 78899999999999999999999999999999999999
Q ss_pred EEccCCCEEEEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEE
Q psy3337 166 DFSISGEQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQ 245 (297)
Q Consensus 166 ~~sp~~~~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~ 245 (297)
.|+ +.+|++++.|+.|++||+++++.+..+..|... +..+++ ++.+|++ |+.|+.|++
T Consensus 303 ~~~--~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~----------v~~~~~--~~~~l~s--------g~~dg~i~v 360 (435)
T 1p22_A 303 QYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEEL----------VRCIRF--DNKRIVS--------GAYDGKIKV 360 (435)
T ss_dssp EEE--TTEEEEEETTSCEEEEETTTCCEEEEECCCSSC----------EEEEEC--CSSEEEE--------EETTSCEEE
T ss_pred EeC--CCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCc----------EEEEEe--cCCEEEE--------EeCCCcEEE
Confidence 994 679999999999999999999999888876521 223445 6778888 455999999
Q ss_pred EeCCCCc---------eEEEeccCCC-eEEEEEcCCCCEEEEEecCCCeEEEEEeCCcee
Q psy3337 246 WDVDSGR---------LRLAREMKES-LSALAVRDDGRFVAVGTMFTGSVFVYIAFSLQM 295 (297)
Q Consensus 246 wd~~~~~---------~~~~~~~~~~-v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~~~~ 295 (297)
||+.+++ ++..+..|.. |.+++| ++.+|++++. ||.|++||+.+...
T Consensus 361 wd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~-Dg~i~iwd~~~~~~ 417 (435)
T 1p22_A 361 WDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSH-DDTILIWDFLNDPA 417 (435)
T ss_dssp EEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCS-SSEEEEEC------
T ss_pred EECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeC-CCEEEEEECCCCCC
Confidence 9997765 7888888877 999999 7889999999 99999999977653
No 104
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.95 E-value=3.3e-27 Score=204.55 Aligned_cols=198 Identities=12% Similarity=0.121 Sum_probs=134.3
Q ss_pred CCCCCCCceEEE-EeeCCCeEEE--E--ecCCCCcEEEEEEec--------CCCEEEEEcCCCcEEEEeCCCCeeeEEec
Q psy3337 90 NSIDSKEKNLRF-GFKTFDSVQT--V--FAGSESLQRVVRLSR--------NGDLMVTGGTDGHLRLWSFPKMKPLLHIE 156 (297)
Q Consensus 90 ~~~~~~d~~i~~-~~~~~~~~~~--~--~~~h~~~v~~~~~s~--------~g~~l~s~~~d~~i~iwd~~~~~~~~~~~ 156 (297)
..+++.|++|+| +..+++.... + ..+|.+.|++++|+| |+++||+|+.|++|+|||+.++.++..+.
T Consensus 104 las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~ 183 (393)
T 4gq1_A 104 LACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGY 183 (393)
T ss_dssp EEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEE
T ss_pred EEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeec
Confidence 457889999999 8888765432 1 148999999999998 78999999999999999999888888888
Q ss_pred cccCCeeEEEEccCC-CEEEEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEE---------------EeeeeeeeeeC
Q psy3337 157 AHSKEIDDVDFSISG-EQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLF---------------KRCRYGLVEDS 220 (297)
Q Consensus 157 ~~~~~v~~~~~sp~~-~~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~s 220 (297)
.|...|.+++|+|++ .+|++++.|++|++||+++++.......+........+ ....+..+.|+
T Consensus 184 ~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~ 263 (393)
T 4gq1_A 184 PLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWI 263 (393)
T ss_dssp ECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEE
T ss_pred CCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeee
Confidence 899999999999987 48999999999999999988665444322110000000 01123345554
Q ss_pred -CCCeEEEEeccCcccccCCCCeEEEEeCCCCceEEEeccCCC-eEE------------------EEEcC--CCCEEEEE
Q psy3337 221 -PKRSRLFTLANPLAQNKRGISYVQQWDVDSGRLRLAREMKES-LSA------------------LAVRD--DGRFVAVG 278 (297)
Q Consensus 221 -~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~-v~~------------------~~~s~--dg~~l~~~ 278 (297)
|++..|++.+ .|+.+++||+..++....+..+.. +.. ..|+| ++.++++|
T Consensus 264 ~~dg~~l~s~s--------~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg 335 (393)
T 4gq1_A 264 GSDGSGILAMC--------KSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAH 335 (393)
T ss_dssp TTTTCEEEEEC--------TTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEE
T ss_pred cCCCCEEEEEe--------CCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEE
Confidence 8999999854 499999999988766555443322 222 23333 44567788
Q ss_pred ecCCCeEEEEEeCCceec
Q psy3337 279 TMFTGSVFVYIAFSLQMC 296 (297)
Q Consensus 279 ~~~dg~i~vwd~~~~~~~ 296 (297)
+. ||.|++||+.+++.+
T Consensus 336 s~-Dg~V~lwd~~~~~~~ 352 (393)
T 4gq1_A 336 SQ-HGLIQLINTYEKDSN 352 (393)
T ss_dssp TT-TTEEEEEETTCTTCC
T ss_pred CC-CCEEEEEECCCCcEE
Confidence 88 999999999887653
No 105
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.95 E-value=5.9e-26 Score=199.59 Aligned_cols=179 Identities=20% Similarity=0.273 Sum_probs=156.3
Q ss_pred CCCCCCCceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCeeeEEeccccCCeeEEEEc
Q psy3337 90 NSIDSKEKNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFS 168 (297)
Q Consensus 90 ~~~~~~d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s 168 (297)
..+++.|++|++ ++.+++.+..+. +|...|.++.|+ ++.|++|+.|+.|++||+.+++.+..+.+|...|.+++|
T Consensus 172 l~s~~~dg~i~vwd~~~~~~~~~~~-~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~- 247 (445)
T 2ovr_B 172 IISGSTDRTLKVWNAETGECIHTLY-GHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY- 247 (445)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEEC-CCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE-
T ss_pred EEEEeCCCeEEEEECCcCcEEEEEC-CCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE-
Confidence 567889999999 999999998888 999999999996 568999999999999999999999999999999999999
Q ss_pred cCCCEEEEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeC
Q psy3337 169 ISGEQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDV 248 (297)
Q Consensus 169 p~~~~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~ 248 (297)
++.+|++++.|+.|++||+++++.+..+..|... +..+.+ ++.+++++ +.|+.|++||+
T Consensus 248 -~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~----------v~~~~~--~~~~l~~~--------~~d~~i~i~d~ 306 (445)
T 2ovr_B 248 -DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNR----------VYSLQF--DGIHVVSG--------SLDTSIRVWDV 306 (445)
T ss_dssp -CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSC----------EEEEEE--CSSEEEEE--------ETTSCEEEEET
T ss_pred -CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCc----------eEEEEE--CCCEEEEE--------eCCCeEEEEEC
Confidence 7789999999999999999999998888766421 223445 77888884 45999999999
Q ss_pred CCCceEEEeccCCC-eEEEEEcCCCCEEEEEecCCCeEEEEEeCCceec
Q psy3337 249 DSGRLRLAREMKES-LSALAVRDDGRFVAVGTMFTGSVFVYIAFSLQMC 296 (297)
Q Consensus 249 ~~~~~~~~~~~~~~-v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~~~~~ 296 (297)
++++++..+..|.. +.++.+ ++.+|++|+. ||.|++||+.+++.+
T Consensus 307 ~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~-dg~i~vwd~~~~~~~ 352 (445)
T 2ovr_B 307 ETGNCIHTLTGHQSLTSGMEL--KDNILVSGNA-DSTVKIWDIKTGQCL 352 (445)
T ss_dssp TTCCEEEEECCCCSCEEEEEE--ETTEEEEEET-TSCEEEEETTTCCEE
T ss_pred CCCCEEEEEcCCcccEEEEEE--eCCEEEEEeC-CCeEEEEECCCCcEE
Confidence 99999999988877 887777 5679999999 999999999887754
No 106
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.95 E-value=6.4e-26 Score=198.04 Aligned_cols=188 Identities=12% Similarity=0.201 Sum_probs=159.1
Q ss_pred CCCCCCCceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCC-eeeEEeccccCCeeEEEE
Q psy3337 90 NSIDSKEKNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKM-KPLLHIEAHSKEIDDVDF 167 (297)
Q Consensus 90 ~~~~~~d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~-~~~~~~~~~~~~v~~~~~ 167 (297)
..+++.|++|++ ++.+++.+..+. +|...+.+++++ +..|++|+.|+.+++||.... ..+..+.+|...+..+.|
T Consensus 162 lasgs~Dg~v~iWd~~~~~~~~~~~-~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~ 238 (420)
T 4gga_A 162 LAVGTSSAEVQLWDVQQQKRLRNMT-SHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRW 238 (420)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEEC-CCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEE
T ss_pred EEEEECCCeEEEEEcCCCcEEEEEe-CCCCceEEEeeC--CCEEEEEeCCCceeEeeecccceeeEEecccccceeeeee
Confidence 557899999999 999999999988 999999888775 679999999999999998764 456788999999999999
Q ss_pred ccCCCEEEEEeCCCcEEEEEcCCCcee----eeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeE
Q psy3337 168 SISGEQIVSIAKDGKAFVWNSKNGSLS----KELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYV 243 (297)
Q Consensus 168 sp~~~~l~s~~~d~~v~lwd~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i 243 (297)
+|++.++++++.|+.+++||..+++.. .....|. ..+..++|+|.+..+++... |+.|+.|
T Consensus 239 ~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~----------~~V~~~~~~p~~~~~la~~~-----gs~D~~I 303 (420)
T 4gga_A 239 APDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQ----------GAVKAVAWCPWQSNVLATGG-----GTSDRHI 303 (420)
T ss_dssp CTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCS----------SCEEEEEECTTCTTEEEEEE-----CTTTCEE
T ss_pred cCCCCeeeeeeccccceEEeeccccccceeeeeecccC----------CceeeeeeCCCcccEEEEEe-----ecCCCEE
Confidence 999999999999999999999876532 2222222 23345778998776666544 7889999
Q ss_pred EEEeCCCCceEEEeccCCCeEEEEEcCCCCEEEEEe--cCCCeEEEEEeCCceec
Q psy3337 244 QQWDVDSGRLRLAREMKESLSALAVRDDGRFVAVGT--MFTGSVFVYIAFSLQMC 296 (297)
Q Consensus 244 ~~wd~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~--~~dg~i~vwd~~~~~~~ 296 (297)
++||+.++++...+..+..+.++.|+|+++.|++++ . |+.|+|||+.+++++
T Consensus 304 ~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~-d~~I~iwd~~~~~~v 357 (420)
T 4gga_A 304 RIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFA-QNQLVIWKYPTMAKV 357 (420)
T ss_dssp EEEETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECTT-TCCEEEEETTTCCEE
T ss_pred EEEeCCccccceeeccccceeeeeecCCCCeEEEEEecC-CCEEEEEECCCCcEE
Confidence 999999999999999888899999999999988765 6 899999999998865
No 107
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.95 E-value=6.8e-26 Score=194.01 Aligned_cols=184 Identities=16% Similarity=0.236 Sum_probs=154.0
Q ss_pred CCCCCCCceEEE-Eee--CCCeEEEEecCCCCcEEEEEEecC--CCEEEEEcCCCcEEEEeCCCCe--eeEEeccccCCe
Q psy3337 90 NSIDSKEKNLRF-GFK--TFDSVQTVFAGSESLQRVVRLSRN--GDLMVTGGTDGHLRLWSFPKMK--PLLHIEAHSKEI 162 (297)
Q Consensus 90 ~~~~~~d~~i~~-~~~--~~~~~~~~~~~h~~~v~~~~~s~~--g~~l~s~~~d~~i~iwd~~~~~--~~~~~~~~~~~v 162 (297)
..+++.|+.|++ ++. +++.+..+. +|...|++++|+|+ +++|++|+.|+.|++||+.+++ .+..+..|...|
T Consensus 26 l~~~~~dg~i~iw~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v 104 (379)
T 3jrp_A 26 LATCSSDKTIKIFEVEGETHKLIDTLT-GHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASV 104 (379)
T ss_dssp EEEEETTSCEEEEEEETTEEEEEEEEC-CCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCE
T ss_pred EEEEECCCcEEEEecCCCcceeeeEec-CCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcce
Confidence 457788999999 777 556666776 99999999999987 8999999999999999999887 777888899999
Q ss_pred eEEEEccC--CCEEEEEeCCCcEEEEEcCCCceee--eeeccCCCCceEEEEeeeeeeeeeCC-------------CCeE
Q psy3337 163 DDVDFSIS--GEQIVSIAKDGKAFVWNSKNGSLSK--ELKWNTPDNIKYLFKRCRYGLVEDSP-------------KRSR 225 (297)
Q Consensus 163 ~~~~~sp~--~~~l~s~~~d~~v~lwd~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~s~-------------~~~~ 225 (297)
.+++|+|+ +.+|++++.|+.|++||++++.... .+..|. ..+..++|+| ++..
T Consensus 105 ~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~----------~~v~~~~~~~~~~~~~~~~~~~~~~~~ 174 (379)
T 3jrp_A 105 NSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHA----------IGVNSASWAPATIEEDGEHNGTKESRK 174 (379)
T ss_dssp EEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCT----------TCEEEEEECCCC----------CTTCE
T ss_pred EEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCC----------CceEEEEEcCccccccccccCCCCCCE
Confidence 99999999 9999999999999999998774332 333332 1234577888 6888
Q ss_pred EEEeccCcccccCCCCeEEEEeCCCCc----eEEEeccCCC-eEEEEEcCC---CCEEEEEecCCCeEEEEEeCCc
Q psy3337 226 LFTLANPLAQNKRGISYVQQWDVDSGR----LRLAREMKES-LSALAVRDD---GRFVAVGTMFTGSVFVYIAFSL 293 (297)
Q Consensus 226 l~~~~~~~~~~g~~d~~i~~wd~~~~~----~~~~~~~~~~-v~~~~~s~d---g~~l~~~~~~dg~i~vwd~~~~ 293 (297)
+++++ .|+.|++||+++++ ....+..|.. |.+++|+|+ +.+|++++. ||.|++||+.++
T Consensus 175 l~~~~--------~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~-dg~i~iwd~~~~ 241 (379)
T 3jrp_A 175 FVTGG--------ADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQ-DRTCIIWTQDNE 241 (379)
T ss_dssp EEEEE--------TTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEET-TSCEEEEEESST
T ss_pred EEEEe--------CCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeC-CCEEEEEeCCCC
Confidence 88844 49999999998754 4456777766 999999999 899999999 999999999886
No 108
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.94 E-value=7.9e-25 Score=188.82 Aligned_cols=240 Identities=12% Similarity=0.069 Sum_probs=179.4
Q ss_pred cceeeeCCCccE-EEeccCCceeeEEEeeEEeeccccccccCCCCchhhhhhcccccchhhhhccCCCcccccccCCCCC
Q psy3337 2 NCDVHSNGKNIY-VVAGQENSNQLYKITAEFTQMNGVVKSKESNNTADTIVRKRKEKDKENAKQKGGKKEKSNEKGKNKK 80 (297)
Q Consensus 2 ~~~~~~~~~~~~-~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (297)
.|+.|+++++++ ++++.|+.+++|++........... . . .-....
T Consensus 35 ~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~---~-------~--~v~~~~---------------------- 80 (391)
T 1l0q_A 35 MGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPA---G-------S--SPQGVA---------------------- 80 (391)
T ss_dssp EEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEEC---S-------S--SEEEEE----------------------
T ss_pred ceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEEC---C-------C--CccceE----------------------
Confidence 356688888876 5666899999999854332110000 0 0 000000
Q ss_pred CCCCCCCCcCCCCCCCceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCEE-EEEcCCCcEEEEeCCCCeeeEEeccc
Q psy3337 81 DKIEDPPILNSIDSKEKNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDLM-VTGGTDGHLRLWSFPKMKPLLHIEAH 158 (297)
Q Consensus 81 ~~~~~~~~l~~~~~~d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l-~s~~~d~~i~iwd~~~~~~~~~~~~~ 158 (297)
...+...+..++..++.|++ ++.+++.+..+. .| ..+.+++|+|+++.| ++++.++.|++||+.+++.+..+..+
T Consensus 81 -~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~-~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~ 157 (391)
T 1l0q_A 81 -VSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVK-TG-KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG 157 (391)
T ss_dssp -ECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE-CS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC
T ss_pred -ECCCCCEEEEEECCCCEEEEEECCCCeEEEEEe-CC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC
Confidence 01111222345667899999 999998887775 44 467999999999877 78888999999999999988888765
Q ss_pred cCCeeEEEEccCCCEE-EEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCccccc
Q psy3337 159 SKEIDDVDFSISGEQI-VSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNK 237 (297)
Q Consensus 159 ~~~v~~~~~sp~~~~l-~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g 237 (297)
. .+.+++|+|++++| ++++.++.|++||+++++.+..+..+. ....++|+|++.++++... .
T Consensus 158 ~-~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~-----------~~~~~~~~~~g~~l~~~~~-----~ 220 (391)
T 1l0q_A 158 R-SPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEA-----------APSGIAVNPEGTKAYVTNV-----D 220 (391)
T ss_dssp S-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSS-----------EEEEEEECTTSSEEEEEEE-----C
T ss_pred C-CcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecCC-----------CccceEECCCCCEEEEEec-----C
Confidence 4 57999999999887 567789999999999988776665331 1234789999999988652 2
Q ss_pred CCCCeEEEEeCCCCceEEEeccCCCeEEEEEcCCCCEE-EEEecCCCeEEEEEeCCceec
Q psy3337 238 RGISYVQQWDVDSGRLRLAREMKESLSALAVRDDGRFV-AVGTMFTGSVFVYIAFSLQMC 296 (297)
Q Consensus 238 ~~d~~i~~wd~~~~~~~~~~~~~~~v~~~~~s~dg~~l-~~~~~~dg~i~vwd~~~~~~~ 296 (297)
..++.|++||+.+++.+..+..+..+.+++|+|+|++| ++++. |+.|++||+.+++.+
T Consensus 221 ~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~s~~~-d~~v~v~d~~~~~~~ 279 (391)
T 1l0q_A 221 KYFNTVSMIDTGTNKITARIPVGPDPAGIAVTPDGKKVYVALSF-XNTVSVIDTATNTIT 279 (391)
T ss_dssp SSCCEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETT-TTEEEEEETTTTEEE
T ss_pred cCCCcEEEEECCCCeEEEEEecCCCccEEEEccCCCEEEEEcCC-CCEEEEEECCCCcEE
Confidence 24899999999999999998888779999999999988 56677 999999999988764
No 109
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.94 E-value=3.1e-26 Score=217.34 Aligned_cols=254 Identities=12% Similarity=0.090 Sum_probs=174.1
Q ss_pred eeeeCCCccEEEeccCCceeeEEEeeEEeeccccccccCCCCchhhhhhcccccchhhhhccCCCcccccccCCCCCC--
Q psy3337 4 DVHSNGKNIYVVAGQENSNQLYKITAEFTQMNGVVKSKESNNTADTIVRKRKEKDKENAKQKGGKKEKSNEKGKNKKD-- 81 (297)
Q Consensus 4 ~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 81 (297)
+.|++++++|++|+.|++++||++........... . .. .. | .... .+.....
T Consensus 441 v~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~---~---~~---l~-~-------~~~~---------~h~~~V~sv 494 (902)
T 2oaj_A 441 KLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASF---E---VN---LS-R-------TLNK---------AKELAVDKI 494 (902)
T ss_dssp CCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCE---E---EE---HH-H-------HTTC---------SSSCCEEEE
T ss_pred ccccccCcEEEEecCCCcEEEEECCCccccCCceE---E---ee---ch-h-------hcCC---------CCCCceeEE
Confidence 34788899999999999999999876421000000 0 00 00 0 0000 0000000
Q ss_pred CCCCCCCcCCCCCCCceEEE-EeeCCC---------------------------------------------eEEEEecC
Q psy3337 82 KIEDPPILNSIDSKEKNLRF-GFKTFD---------------------------------------------SVQTVFAG 115 (297)
Q Consensus 82 ~~~~~~~l~~~~~~d~~i~~-~~~~~~---------------------------------------------~~~~~~~~ 115 (297)
...+..-+..+++.|++|+| +..+++ ++..+. +
T Consensus 495 afspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~-~ 573 (902)
T 2oaj_A 495 SFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVH-A 573 (902)
T ss_dssp EEETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEEC-C
T ss_pred EecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEE-c
Confidence 00011112567889999999 877663 255565 8
Q ss_pred CCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCeeeE-----Eec-cccCCeeEEEEc-----cCC---CEEEEEeCCC
Q psy3337 116 SESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLL-----HIE-AHSKEIDDVDFS-----ISG---EQIVSIAKDG 181 (297)
Q Consensus 116 h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~-----~~~-~~~~~v~~~~~s-----p~~---~~l~s~~~d~ 181 (297)
|.+.|++++||||| +||+|+.|++|+|||++++..+. .+. +|...|++++|+ ||| .+|++++.|+
T Consensus 574 h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~ 652 (902)
T 2oaj_A 574 NKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMG 652 (902)
T ss_dssp CSCSEEEEEECBTS-EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTS
T ss_pred CCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCC
Confidence 99999999999999 99999999999999998877653 343 899999999999 885 8999999999
Q ss_pred cEEEEEc---CCCceeeeeeccCCCC-ceEEEEeeeee----eee-------------eCCCCeEEEEeccCcccccCCC
Q psy3337 182 KAFVWNS---KNGSLSKELKWNTPDN-IKYLFKRCRYG----LVE-------------DSPKRSRLFTLANPLAQNKRGI 240 (297)
Q Consensus 182 ~v~lwd~---~~~~~~~~~~~~~~~~-~~~~~~~~~~~----~~~-------------~s~~~~~l~~~~~~~~~~g~~d 240 (297)
+|++||+ .+|+....+.+|.... ...++....+. ..+ ..+++..|++. +
T Consensus 653 tv~~wd~~p~~~g~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~~a~~~~~~~l~~~~~~~~~~l~~~----------~ 722 (902)
T 2oaj_A 653 EVITYKILPASGGKFDVQLMDITNVTSKGPIHKIDAFSKETKSSCLATIPKMQNLSKGLCIPGIVLITG----------F 722 (902)
T ss_dssp EEEEEEEEECGGGCEEEEEEEEEECCSSCCCCEEEEEETTTCCBCBCBHHHHHGGGGTCCCCEEEEEEC----------S
T ss_pred cEEEEEEecCCCCcEEEEecCceecCCCCceEEEEeEecCCCCcccCCHHHHhccCCCCCCCeEEEEEe----------c
Confidence 9999999 7888888877664110 00001100010 000 12555555442 6
Q ss_pred CeEEEEeCCCCceEEEeccCCC-eEEE---E------EcCCCCEEEEEecCCCeEEEEEeCCceec
Q psy3337 241 SYVQQWDVDSGRLRLAREMKES-LSAL---A------VRDDGRFVAVGTMFTGSVFVYIAFSLQMC 296 (297)
Q Consensus 241 ~~i~~wd~~~~~~~~~~~~~~~-v~~~---~------~s~dg~~l~~~~~~dg~i~vwd~~~~~~~ 296 (297)
..|++|++.++++......+.. +.++ . |+++|..|++++. ||+|++|++.+++++
T Consensus 723 ~~ir~~~~~~~k~~~k~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~-~g~i~~~s~p~l~~~ 787 (902)
T 2oaj_A 723 DDIRLITLGKSKSTHKGFKYPLAATGLSYISTVEKNNDRKNLTVIITLEI-NGHLRVFTIPDFKEQ 787 (902)
T ss_dssp SEEEEECTTCCCEEEEECSSCEEEEEEEEEEEECSSSCEEEEEEEEEEET-TSEEEEEETTTCCEE
T ss_pred cceEEEeCccccceeeEcccceeeeEEEEEEeccccccccCceEEEEEeC-CCcEEEEECcchHHH
Confidence 7899999999999877755544 6665 5 7889999999999 999999999999876
No 110
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.94 E-value=8.4e-25 Score=189.06 Aligned_cols=161 Identities=15% Similarity=0.139 Sum_probs=136.1
Q ss_pred CCCCcEEEEEEec-CCCEEEEEcCCCcEEEEeCCCCeeeEEeccccCCeeEEEEccC---CCEEEEEeCCCcEEEEEcCC
Q psy3337 115 GSESLQRVVRLSR-NGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSIS---GEQIVSIAKDGKAFVWNSKN 190 (297)
Q Consensus 115 ~h~~~v~~~~~s~-~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~---~~~l~s~~~d~~v~lwd~~~ 190 (297)
+|...|.+++|+| ++++|++++.|+.|++||+.+++.+..+. +...+.++.|+|. +.++++++.|+.|++||+++
T Consensus 97 ~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~ 175 (408)
T 4a11_B 97 VHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKS 175 (408)
T ss_dssp CCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSS
T ss_pred cCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCC
Confidence 6999999999999 77899999999999999999999887776 7778999999984 45999999999999999999
Q ss_pred CceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeE-EEEeccCcccccCCCCeEEEEeCCCCc-eEEEe-----------
Q psy3337 191 GSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSR-LFTLANPLAQNKRGISYVQQWDVDSGR-LRLAR----------- 257 (297)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~-l~~~~~~~~~~g~~d~~i~~wd~~~~~-~~~~~----------- 257 (297)
++.+..+..|.. .+..++|+|++.+ +++ |+.|+.|++||++++. ++..+
T Consensus 176 ~~~~~~~~~~~~----------~v~~~~~~~~~~~ll~~--------~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~ 237 (408)
T 4a11_B 176 GSCSHILQGHRQ----------EILAVSWSPRYDYILAT--------ASADSRVKLWDVRRASGCLITLDQHNGKKSQAV 237 (408)
T ss_dssp SCCCEEECCCCS----------CEEEEEECSSCTTEEEE--------EETTSCEEEEETTCSSCCSEECCTTTTCSCCCT
T ss_pred cceeeeecCCCC----------cEEEEEECCCCCcEEEE--------EcCCCcEEEEECCCCCcccccccccccccceee
Confidence 988888876642 2345789999985 666 4459999999998754 33433
Q ss_pred ----ccCCC-eEEEEEcCCCCEEEEEecCCCeEEEEEeCCcee
Q psy3337 258 ----EMKES-LSALAVRDDGRFVAVGTMFTGSVFVYIAFSLQM 295 (297)
Q Consensus 258 ----~~~~~-v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~~~~ 295 (297)
..|.. |.+++|+|++++|++++. ||.|++||+.+++.
T Consensus 238 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~vwd~~~~~~ 279 (408)
T 4a11_B 238 ESANTAHNGKVNGLCFTSDGLHLLTVGT-DNRMRLWNSSNGEN 279 (408)
T ss_dssp TTSSCSCSSCEEEEEECTTSSEEEEEET-TSCEEEEETTTCCB
T ss_pred ccccccccCceeEEEEcCCCCEEEEecC-CCeEEEEECCCCcc
Confidence 34444 999999999999999999 99999999988764
No 111
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.94 E-value=3.5e-25 Score=208.27 Aligned_cols=235 Identities=12% Similarity=0.176 Sum_probs=183.0
Q ss_pred cceeeeCCCccEEEeccCCceeeEEEeeEEeeccccccccCCCCchhhhhhcc-cccchhhhhccCCCcccccccCCCCC
Q psy3337 2 NCDVHSNGKNIYVVAGQENSNQLYKITAEFTQMNGVVKSKESNNTADTIVRKR-KEKDKENAKQKGGKKEKSNEKGKNKK 80 (297)
Q Consensus 2 ~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (297)
+|..|++++++|++++.|+.++||++.......... ++... ....
T Consensus 59 ~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~------------~~~~~v~~~~---------------------- 104 (814)
T 3mkq_A 59 RAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFE------------AHPDYIRSIA---------------------- 104 (814)
T ss_dssp EEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEE------------CCSSCEEEEE----------------------
T ss_pred EEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEe------------cCCCCEEEEE----------------------
Confidence 466799999999999999999999986432210000 00000 0000
Q ss_pred CCCCCCCCcCCCCCCCceEEE-EeeCC-CeEEEEecCCCCcEEEEEEec-CCCEEEEEcCCCcEEEEeCCCCeeeEEecc
Q psy3337 81 DKIEDPPILNSIDSKEKNLRF-GFKTF-DSVQTVFAGSESLQRVVRLSR-NGDLMVTGGTDGHLRLWSFPKMKPLLHIEA 157 (297)
Q Consensus 81 ~~~~~~~~l~~~~~~d~~i~~-~~~~~-~~~~~~~~~h~~~v~~~~~s~-~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~ 157 (297)
...+.+ ...+++.|++|++ ++.++ .....+. +|...|.+++|+| +++.|++++.|+.|++||+.+++....+..
T Consensus 105 -~s~~~~-~l~~~~~dg~i~vw~~~~~~~~~~~~~-~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~ 181 (814)
T 3mkq_A 105 -VHPTKP-YVLSGSDDLTVKLWNWENNWALEQTFE-GHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTT 181 (814)
T ss_dssp -ECSSSS-EEEEEETTSEEEEEEGGGTSEEEEEEE-CCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEEC
T ss_pred -EeCCCC-EEEEEcCCCEEEEEECCCCceEEEEEc-CCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEec
Confidence 000111 1347788999999 88877 4555666 9999999999999 889999999999999999998887777766
Q ss_pred cc-CCeeEEEEcc--CCCEEEEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcc
Q psy3337 158 HS-KEIDDVDFSI--SGEQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLA 234 (297)
Q Consensus 158 ~~-~~v~~~~~sp--~~~~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~ 234 (297)
+. ..+.+++|+| ++.+|++++.|+.|++||+.+++.+..+..|.. .+..++|+|++.++++++
T Consensus 182 ~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~----------~v~~~~~~~~~~~l~~~~---- 247 (814)
T 3mkq_A 182 GQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMS----------NVSFAVFHPTLPIIISGS---- 247 (814)
T ss_dssp CCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSS----------CEEEEEECSSSSEEEEEE----
T ss_pred CCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCC----------CEEEEEEcCCCCEEEEEe----
Confidence 55 8899999999 999999999999999999999998888876642 233578999999999854
Q ss_pred cccCCCCeEEEEeCCCCceEEEeccCCC-eEEEEEcCCCC--EEEEEecCCCeEEEEEeCCc
Q psy3337 235 QNKRGISYVQQWDVDSGRLRLAREMKES-LSALAVRDDGR--FVAVGTMFTGSVFVYIAFSL 293 (297)
Q Consensus 235 ~~g~~d~~i~~wd~~~~~~~~~~~~~~~-v~~~~~s~dg~--~l~~~~~~dg~i~vwd~~~~ 293 (297)
.|+.|++||+.+++.+..+..+.. +.+++|+|+|. +++++. ++.+.+|++...
T Consensus 248 ----~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 303 (814)
T 3mkq_A 248 ----EDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGF--DNGFTVLSLGND 303 (814)
T ss_dssp ----TTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCGGGEEEEEE--TTEEEEEECSCC
T ss_pred ----CCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCCCceEEEEEe--CCCEEEEEcCCC
Confidence 499999999999999999988766 99999999987 455555 778999987654
No 112
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.94 E-value=1.2e-24 Score=182.18 Aligned_cols=192 Identities=12% Similarity=0.178 Sum_probs=154.4
Q ss_pred CCCCCCCceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCC-eeeEEeccccCCeeEEEE
Q psy3337 90 NSIDSKEKNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKM-KPLLHIEAHSKEIDDVDF 167 (297)
Q Consensus 90 ~~~~~~d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~-~~~~~~~~~~~~v~~~~~ 167 (297)
..+++.|++|++ +..+++.+..+. +|...+.++. +++..+++++.++.+++|+.... ..+..+.+|...+..+.|
T Consensus 82 l~sgs~Dg~v~iw~~~~~~~~~~~~-~h~~~~~~~~--~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (318)
T 4ggc_A 82 LAVGTSSAEVQLWDVQQQKRLRNMT-SHSARVGSLS--WNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRW 158 (318)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEE-CCSSCEEEEE--EETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEE
T ss_pred EEEEECCCcEEEeecCCceeEEEec-CccceEEEee--cCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEE
Confidence 458899999999 999999999988 9999876654 55679999999999999998765 456788899999999999
Q ss_pred ccCCCEEEEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEe
Q psy3337 168 SISGEQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWD 247 (297)
Q Consensus 168 sp~~~~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd 247 (297)
++++++|++++.|++|++||+++++........... ....+..+.++|++..++.... ++.++.|++||
T Consensus 159 ~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~~~~~~~-----~~~~~~i~lwd 227 (318)
T 4ggc_A 159 APDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQ------HQGAVKAVAWCPWQSNVLATGG-----GTSDRHIRIWN 227 (318)
T ss_dssp CTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECC------CCSCEEEEEECTTSTTEEEEEE-----CTTTCEEEEEE
T ss_pred cCCCCEEEEEecCcceeEEECCCCcccccceeeecc------cCCceEEEEecCCCCcEEEEEe-----cCCCCEEEEEe
Confidence 999999999999999999999877543222111000 0112334667887766665443 77899999999
Q ss_pred CCCCceEEEeccCCCeEEEEEcCCCCEEEEEe--cCCCeEEEEEeCCceec
Q psy3337 248 VDSGRLRLAREMKESLSALAVRDDGRFVAVGT--MFTGSVFVYIAFSLQMC 296 (297)
Q Consensus 248 ~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~--~~dg~i~vwd~~~~~~~ 296 (297)
...............+..+.|+|++..+++++ . |+.|++||+.+++++
T Consensus 228 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~-d~~i~iwd~~~~~~~ 277 (318)
T 4ggc_A 228 VCSGACLSAVDAHSQVCSILWSPHYKELISGHGFA-QNQLVIWKYPTMAKV 277 (318)
T ss_dssp TTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTT-TCCEEEEETTTCCEE
T ss_pred cccccccccccceeeeeeeeecccccceEEEEEcC-CCEEEEEECCCCcEE
Confidence 99988888877777799999999999887654 6 999999999998865
No 113
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.94 E-value=1.6e-25 Score=190.32 Aligned_cols=181 Identities=14% Similarity=0.046 Sum_probs=149.0
Q ss_pred CCCCCCCceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCEEEEEcCCCcEEEEeCC---------CCeeeEEec-cc
Q psy3337 90 NSIDSKEKNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFP---------KMKPLLHIE-AH 158 (297)
Q Consensus 90 ~~~~~~d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~---------~~~~~~~~~-~~ 158 (297)
..+++.|++|++ ++.+++.+..+. ...|.++.|+|+ +++++.|++|++|+.. +++.+..+. .|
T Consensus 51 l~sg~~Dg~v~iwd~~~~~~~~~~~---~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~ 124 (343)
T 3lrv_A 51 CMCRCEDGALHFTQLKDSKTITTIT---TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDS 124 (343)
T ss_dssp EEEEEETTEEEEEEESSSSCEEEEE---EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCC
T ss_pred EEEECCCCcEEEEECCCCcEEEEEe---cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCC
Confidence 458999999999 999999888875 456778889988 9999999999999765 444344443 67
Q ss_pred cCCeeEEEEcc--CCCEEEEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccc
Q psy3337 159 SKEIDDVDFSI--SGEQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQN 236 (297)
Q Consensus 159 ~~~v~~~~~sp--~~~~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~ 236 (297)
...|.+++|+| ++++|++++.|++|++||+++++.+.....+.. ..+..++|+|++.+|++
T Consensus 125 ~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~---------~~i~~~~~~pdg~~las-------- 187 (343)
T 3lrv_A 125 ANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSD---------VEYSSGVLHKDSLLLAL-------- 187 (343)
T ss_dssp SSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSS---------CCCCEEEECTTSCEEEE--------
T ss_pred CCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCC---------CceEEEEECCCCCEEEE--------
Confidence 78899999999 999999999999999999999888655543321 12345889999999998
Q ss_pred cCCCCeEEEEeCCCCceE-EEecc-CCC-eEEEEEcCCCCEEEEEecCCCeEEEEEeCCcee
Q psy3337 237 KRGISYVQQWDVDSGRLR-LAREM-KES-LSALAVRDDGRFVAVGTMFTGSVFVYIAFSLQM 295 (297)
Q Consensus 237 g~~d~~i~~wd~~~~~~~-~~~~~-~~~-v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~~~~ 295 (297)
|+.|+.|++||+++++.+ ..+.. |.. |.+++|+|+|.+|++++. + .|++||+++++.
T Consensus 188 g~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~-~-~v~iwd~~~~~~ 247 (343)
T 3lrv_A 188 YSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECD-Q-TVVCFDLRKDVG 247 (343)
T ss_dssp ECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEES-S-BEEEEETTSSTT
T ss_pred EcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeC-C-eEEEEEcCCCCc
Confidence 555999999999998877 77777 666 999999999999999995 5 999999998764
No 114
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.94 E-value=1.4e-24 Score=183.16 Aligned_cols=195 Identities=12% Similarity=0.123 Sum_probs=155.2
Q ss_pred CCCCCCCceEEE-EeeCCC----eEEEEecCCCCcEEEEEEec--CCCEEEEEcCCCcEEEEeCCCC---------eeeE
Q psy3337 90 NSIDSKEKNLRF-GFKTFD----SVQTVFAGSESLQRVVRLSR--NGDLMVTGGTDGHLRLWSFPKM---------KPLL 153 (297)
Q Consensus 90 ~~~~~~d~~i~~-~~~~~~----~~~~~~~~h~~~v~~~~~s~--~g~~l~s~~~d~~i~iwd~~~~---------~~~~ 153 (297)
..+++.|+.|++ ++.++. ....+. +|...|++++|+| ++++|++|+.|+.|++||++++ +.+.
T Consensus 26 l~~~~~dg~i~iw~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~ 104 (351)
T 3f3f_A 26 VATCSSDQHIKVFKLDKDTSNWELSDSWR-AHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLC 104 (351)
T ss_dssp EEEEETTSEEEEEEECSSSCCEEEEEEEE-CCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEE
T ss_pred EEEeeCCCeEEEEECCCCCCcceecceec-cCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceee
Confidence 457888999999 887663 555666 9999999999999 6999999999999999999876 5678
Q ss_pred EeccccCCeeEEEEccC--CCEEEEEeCCCcEEEEEcCCCceeeeeeccCCCC---ceEEEEeeeeeeeeeCCC---CeE
Q psy3337 154 HIEAHSKEIDDVDFSIS--GEQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDN---IKYLFKRCRYGLVEDSPK---RSR 225 (297)
Q Consensus 154 ~~~~~~~~v~~~~~sp~--~~~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~s~~---~~~ 225 (297)
.+..|...|.+++|+|+ +.+|++++.|+.|++||+++++.+..+....... .........+..++|+|+ +..
T Consensus 105 ~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 184 (351)
T 3f3f_A 105 TLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEK 184 (351)
T ss_dssp EECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCE
T ss_pred eecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcE
Confidence 88899999999999999 9999999999999999999887655443211000 000001123445788997 888
Q ss_pred EEEeccCcccccCCCCeEEEEeCCCCce--EEEeccCCC-eEEEEEcCCC----CEEEEEecCCCeEEEEEeCCce
Q psy3337 226 LFTLANPLAQNKRGISYVQQWDVDSGRL--RLAREMKES-LSALAVRDDG----RFVAVGTMFTGSVFVYIAFSLQ 294 (297)
Q Consensus 226 l~~~~~~~~~~g~~d~~i~~wd~~~~~~--~~~~~~~~~-v~~~~~s~dg----~~l~~~~~~dg~i~vwd~~~~~ 294 (297)
+++.+ .++.+.+|+...++. +..+..|.. |.+++|+|++ .+|++++. ||.|++||+.++.
T Consensus 185 l~~~~--------~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~-dg~i~iwd~~~~~ 251 (351)
T 3f3f_A 185 LAVSA--------LEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCK-DGRIRIFKITEKL 251 (351)
T ss_dssp EEEEE--------TTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEET-TSCEEEEEEEECC
T ss_pred EEEec--------CCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcC-CCeEEEEeCCCCc
Confidence 88854 499998888887765 666777766 9999999998 89999999 9999999998753
No 115
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.94 E-value=7.1e-25 Score=193.07 Aligned_cols=161 Identities=10% Similarity=0.018 Sum_probs=137.1
Q ss_pred CCCcEEEEEEecCCCEE-EEEcCCCcEEEEeCC--CCeeeEEec--cccCCeeEEEEccCCCEEEEEeCCCcEEEEEcCC
Q psy3337 116 SESLQRVVRLSRNGDLM-VTGGTDGHLRLWSFP--KMKPLLHIE--AHSKEIDDVDFSISGEQIVSIAKDGKAFVWNSKN 190 (297)
Q Consensus 116 h~~~v~~~~~s~~g~~l-~s~~~d~~i~iwd~~--~~~~~~~~~--~~~~~v~~~~~sp~~~~l~s~~~d~~v~lwd~~~ 190 (297)
|...|++++|+|++++| ++|+.|+.|++||+. +++.+..+. .|...|.+++|+|++++|++++.|+.|++|++.+
T Consensus 101 ~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~ 180 (450)
T 2vdu_B 101 IYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINS 180 (450)
T ss_dssp CCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTS
T ss_pred cCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCC
Confidence 33479999999999996 899999999999998 888887776 5678899999999999999999999999999987
Q ss_pred Cceee----eeeccCCCCceEEEEeeeeeeeeeCCC---CeEEEEeccCcccccCCCCeEEEEeCCCCceEEE-eccCCC
Q psy3337 191 GSLSK----ELKWNTPDNIKYLFKRCRYGLVEDSPK---RSRLFTLANPLAQNKRGISYVQQWDVDSGRLRLA-REMKES 262 (297)
Q Consensus 191 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~s~~---~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~-~~~~~~ 262 (297)
+.... .+..|. ..+..++|+|+ +.+|++++ .|+.|++||+.+++++.. +.+|..
T Consensus 181 ~~~~~~~~~~~~~h~----------~~v~~~~~sp~~~~~~~l~s~~--------~d~~i~vwd~~~~~~~~~~~~~h~~ 242 (450)
T 2vdu_B 181 IPEEKFTQEPILGHV----------SMLTDVHLIKDSDGHQFIITSD--------RDEHIKISHYPQCFIVDKWLFGHKH 242 (450)
T ss_dssp CCCSSCCCCCSEECS----------SCEEEEEEEECTTSCEEEEEEE--------TTSCEEEEEESCTTCEEEECCCCSS
T ss_pred cccccccceeeeccc----------CceEEEEEcCCCCCCcEEEEEc--------CCCcEEEEECCCCceeeeeecCCCC
Confidence 76543 444443 23445889999 99999854 499999999999888877 556666
Q ss_pred -eEEEEEcCCCCEEEEEecCCCeEEEEEeCCceec
Q psy3337 263 -LSALAVRDDGRFVAVGTMFTGSVFVYIAFSLQMC 296 (297)
Q Consensus 263 -v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~~~~~ 296 (297)
|.+++|+ ++++|++++. |+.|++||+.+++.+
T Consensus 243 ~v~~~~~s-d~~~l~s~~~-d~~v~vwd~~~~~~~ 275 (450)
T 2vdu_B 243 FVSSICCG-KDYLLLSAGG-DDKIFAWDWKTGKNL 275 (450)
T ss_dssp CEEEEEEC-STTEEEEEES-SSEEEEEETTTCCEE
T ss_pred ceEEEEEC-CCCEEEEEeC-CCeEEEEECCCCcEe
Confidence 9999999 9999999999 999999999998754
No 116
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.94 E-value=3.8e-24 Score=184.54 Aligned_cols=185 Identities=12% Similarity=0.098 Sum_probs=153.7
Q ss_pred CCCCCCCceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCEEE-EEcCCCcEEEEeCCCCeeeEEeccccCCeeEEEE
Q psy3337 90 NSIDSKEKNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDLMV-TGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDF 167 (297)
Q Consensus 90 ~~~~~~d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~-s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~ 167 (297)
..+++.|++|++ +..+++.+..+. .+. .+.+++|+|++++|+ +++.++.|++||+.+++.+..+..+ ..+.+++|
T Consensus 47 ~~~~~~d~~i~v~d~~~~~~~~~~~-~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~-~~~~~~~~ 123 (391)
T 1l0q_A 47 YVANAHSNDVSIIDTATNNVIATVP-AGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTG-KSPLGLAL 123 (391)
T ss_dssp EEEEGGGTEEEEEETTTTEEEEEEE-CSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEE
T ss_pred EEECCCCCeEEEEECCCCeEEEEEE-CCC-CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCC-CCcceEEE
Confidence 346668899999 999999888886 444 899999999999775 5557799999999999988877754 46899999
Q ss_pred ccCCCEE-EEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEE
Q psy3337 168 SISGEQI-VSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQW 246 (297)
Q Consensus 168 sp~~~~l-~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~w 246 (297)
+|++++| ++++.|+.|++||+.+++.+..+..+.. ...++|+|+++.++.. ++.++.|++|
T Consensus 124 s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-----------~~~~~~~~dg~~l~~~-------~~~~~~v~~~ 185 (391)
T 1l0q_A 124 SPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRS-----------PKGIAVTPDGTKVYVA-------NFDSMSISVI 185 (391)
T ss_dssp CTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCSS-----------EEEEEECTTSSEEEEE-------ETTTTEEEEE
T ss_pred CCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCCC-----------cceEEECCCCCEEEEE-------eCCCCEEEEE
Confidence 9999977 6778899999999999988877765431 1347799999988543 3458999999
Q ss_pred eCCCCceEEEeccCCCeEEEEEcCCCCEEEEEe---cCCCeEEEEEeCCceec
Q psy3337 247 DVDSGRLRLAREMKESLSALAVRDDGRFVAVGT---MFTGSVFVYIAFSLQMC 296 (297)
Q Consensus 247 d~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~---~~dg~i~vwd~~~~~~~ 296 (297)
|+.+++.+..+..+..+.+++|+|+|++|++++ . ++.|++||+.+++.+
T Consensus 186 d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~-~~~v~~~d~~~~~~~ 237 (391)
T 1l0q_A 186 DTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKY-FNTVSMIDTGTNKIT 237 (391)
T ss_dssp ETTTTEEEEEEECSSEEEEEEECTTSSEEEEEEECSS-CCEEEEEETTTTEEE
T ss_pred ECCCCeEEEEEecCCCccceEECCCCCEEEEEecCcC-CCcEEEEECCCCeEE
Confidence 999999888888776799999999999999888 6 899999999987754
No 117
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.93 E-value=3e-25 Score=189.09 Aligned_cols=182 Identities=12% Similarity=0.212 Sum_probs=152.2
Q ss_pred CCCCCceEEE-EeeCCCeEEEEe----cCCCCcEEEEEEecC----CCEEEEEcCCCcEEEEeCCCCeeeEEeccccCCe
Q psy3337 92 IDSKEKNLRF-GFKTFDSVQTVF----AGSESLQRVVRLSRN----GDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEI 162 (297)
Q Consensus 92 ~~~~d~~i~~-~~~~~~~~~~~~----~~h~~~v~~~~~s~~----g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v 162 (297)
++..++.|++ +..+++.+..+. ..|...|++++|+|+ +++|++|+.|+.|++||+.+++.+..+.+|...|
T Consensus 39 ~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i 118 (366)
T 3k26_A 39 ATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAI 118 (366)
T ss_dssp EEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCE
T ss_pred EECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcE
Confidence 4445568999 888887766665 126688999999999 6799999999999999999999999999999999
Q ss_pred eEEEEcc-CCCEEEEEeCCCcEEEEEcCCCceeeee---eccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccC
Q psy3337 163 DDVDFSI-SGEQIVSIAKDGKAFVWNSKNGSLSKEL---KWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKR 238 (297)
Q Consensus 163 ~~~~~sp-~~~~l~s~~~d~~v~lwd~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~ 238 (297)
.+++|+| ++.+|++++.|+.|++||+++++.+..+ ..|. ..+..++|+|++.+|++++.
T Consensus 119 ~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~----------~~v~~~~~~~~~~~l~~~~~------- 181 (366)
T 3k26_A 119 NELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHR----------DEVLSADYDLLGEKIMSCGM------- 181 (366)
T ss_dssp EEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCS----------SCEEEEEECTTSSEEEEEET-------
T ss_pred EEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEeccccccc----------CceeEEEECCCCCEEEEecC-------
Confidence 9999999 9999999999999999999999888777 3332 22445889999999998554
Q ss_pred CCCeEEEEeCCCCceEEEec----------------------------cCCC-eEEEEEcCCCCEEEEEecCCCeEEEEE
Q psy3337 239 GISYVQQWDVDSGRLRLARE----------------------------MKES-LSALAVRDDGRFVAVGTMFTGSVFVYI 289 (297)
Q Consensus 239 ~d~~i~~wd~~~~~~~~~~~----------------------------~~~~-v~~~~~s~dg~~l~~~~~~dg~i~vwd 289 (297)
|+.|++||+++++.+..+. .|.. |.+++|+ +.+|++++. |+.|++||
T Consensus 182 -dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~-d~~i~~wd 257 (366)
T 3k26_A 182 -DHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSC-ENAIVCWK 257 (366)
T ss_dssp -TSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECS-SSEEEEEE
T ss_pred -CCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEec-CCEEEEEe
Confidence 9999999999866543333 2555 9999998 789999999 99999999
Q ss_pred eCCce
Q psy3337 290 AFSLQ 294 (297)
Q Consensus 290 ~~~~~ 294 (297)
+.+++
T Consensus 258 ~~~~~ 262 (366)
T 3k26_A 258 PGKME 262 (366)
T ss_dssp ESSTT
T ss_pred CCCcc
Confidence 98764
No 118
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.93 E-value=1.7e-24 Score=189.66 Aligned_cols=185 Identities=14% Similarity=0.194 Sum_probs=153.7
Q ss_pred CcCCCCCCCceEEE-EeeC----------CCeEEEEecCCCCcEEEEEEecCCC-EEEEEcCCCcEEEEeCCCCee----
Q psy3337 88 ILNSIDSKEKNLRF-GFKT----------FDSVQTVFAGSESLQRVVRLSRNGD-LMVTGGTDGHLRLWSFPKMKP---- 151 (297)
Q Consensus 88 ~l~~~~~~d~~i~~-~~~~----------~~~~~~~~~~h~~~v~~~~~s~~g~-~l~s~~~d~~i~iwd~~~~~~---- 151 (297)
.+..+++.|+.|++ ++.+ ...+..+. +|...|++++|+|++. +|++|+.||.|++||+.++..
T Consensus 142 ~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~ 220 (430)
T 2xyi_A 142 CVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLR-GHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRV 220 (430)
T ss_dssp EEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEE-CCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGE
T ss_pred cEEEEECCCCcEEEEECCCcccccCccccCCCcEEec-CCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCce
Confidence 34567888999999 8776 56677777 9999999999999987 999999999999999987321
Q ss_pred ---eEEeccccCCeeEEEEcc-CCCEEEEEeCCCcEEEEEcCCC---ceeeeeeccCCCCceEEEEeeeeeeeeeCCCCe
Q psy3337 152 ---LLHIEAHSKEIDDVDFSI-SGEQIVSIAKDGKAFVWNSKNG---SLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRS 224 (297)
Q Consensus 152 ---~~~~~~~~~~v~~~~~sp-~~~~l~s~~~d~~v~lwd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 224 (297)
...+.+|...|.+++|+| ++.+|++++.|+.|++||++++ ..+..+..|. ..+..++|+|++.
T Consensus 221 ~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~----------~~v~~i~~~p~~~ 290 (430)
T 2xyi_A 221 IDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHT----------AEVNCLSFNPYSE 290 (430)
T ss_dssp EECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCS----------SCEEEEEECSSCT
T ss_pred eccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCC----------CCeEEEEeCCCCC
Confidence 456778999999999999 7789999999999999999976 4555555443 2344588999987
Q ss_pred E-EEEeccCcccccCCCCeEEEEeCCC-CceEEEeccCCC-eEEEEEcCCCC-EEEEEecCCCeEEEEEeCC
Q psy3337 225 R-LFTLANPLAQNKRGISYVQQWDVDS-GRLRLAREMKES-LSALAVRDDGR-FVAVGTMFTGSVFVYIAFS 292 (297)
Q Consensus 225 ~-l~~~~~~~~~~g~~d~~i~~wd~~~-~~~~~~~~~~~~-v~~~~~s~dg~-~l~~~~~~dg~i~vwd~~~ 292 (297)
. +++ |+.|+.|++||+++ .+++..+..|.. |.+++|+|++. +|++++. |+.|+|||+.+
T Consensus 291 ~~l~t--------g~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~-d~~i~iwd~~~ 353 (430)
T 2xyi_A 291 FILAT--------GSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGT-DRRLHVWDLSK 353 (430)
T ss_dssp TEEEE--------EETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEET-TSCCEEEEGGG
T ss_pred CEEEE--------EeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeC-CCcEEEEeCCC
Confidence 4 656 45599999999998 567788887766 99999999985 6899999 99999999986
No 119
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.93 E-value=1.3e-24 Score=202.92 Aligned_cols=185 Identities=16% Similarity=0.236 Sum_probs=155.0
Q ss_pred CCCCCCCceEEE-Eee--CCCeEEEEecCCCCcEEEEEEecC--CCEEEEEcCCCcEEEEeCCCCe--eeEEeccccCCe
Q psy3337 90 NSIDSKEKNLRF-GFK--TFDSVQTVFAGSESLQRVVRLSRN--GDLMVTGGTDGHLRLWSFPKMK--PLLHIEAHSKEI 162 (297)
Q Consensus 90 ~~~~~~d~~i~~-~~~--~~~~~~~~~~~h~~~v~~~~~s~~--g~~l~s~~~d~~i~iwd~~~~~--~~~~~~~~~~~v 162 (297)
..+++.|++|++ +.. +++.+..+. +|...|++++|+|+ +++|++|+.||.|++||+.+++ .+..+.+|...|
T Consensus 24 latg~~dg~I~vwd~~~~~~~~~~~l~-~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V 102 (753)
T 3jro_A 24 LATCSSDKTIKIFEVEGETHKLIDTLT-GHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASV 102 (753)
T ss_dssp EEEEETTTEEEEEEEETTEEEEEEEEC-CCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCE
T ss_pred EEEEECCCcEEEEecCCCCCccceecc-CCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCe
Confidence 457788999999 777 455666776 99999999999998 9999999999999999999886 677888999999
Q ss_pred eEEEEccC--CCEEEEEeCCCcEEEEEcCCCcee--eeeeccCCCCceEEEEeeeeeeeeeCC-------------CCeE
Q psy3337 163 DDVDFSIS--GEQIVSIAKDGKAFVWNSKNGSLS--KELKWNTPDNIKYLFKRCRYGLVEDSP-------------KRSR 225 (297)
Q Consensus 163 ~~~~~sp~--~~~l~s~~~d~~v~lwd~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~s~-------------~~~~ 225 (297)
.+++|+|+ +.+|++++.||.|++||++++... ..+..|. ..+..++|+| ++..
T Consensus 103 ~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~----------~~v~~l~~~p~~~~~~~~~~~~~d~~~ 172 (753)
T 3jro_A 103 NSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHA----------IGVNSASWAPATIEEDGEHNGTKESRK 172 (753)
T ss_dssp EEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCS----------SCEEEEEECCCC---------CGGGCC
T ss_pred EEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCC----------CceEEEEecCcccccccccccCCCCCE
Confidence 99999999 999999999999999999877433 2333332 2234577888 5778
Q ss_pred EEEeccCcccccCCCCeEEEEeCCCC----ceEEEeccCCC-eEEEEEcCC---CCEEEEEecCCCeEEEEEeCCce
Q psy3337 226 LFTLANPLAQNKRGISYVQQWDVDSG----RLRLAREMKES-LSALAVRDD---GRFVAVGTMFTGSVFVYIAFSLQ 294 (297)
Q Consensus 226 l~~~~~~~~~~g~~d~~i~~wd~~~~----~~~~~~~~~~~-v~~~~~s~d---g~~l~~~~~~dg~i~vwd~~~~~ 294 (297)
+++ |+.|+.|++||++++ .+...+.+|.. |.+++|+|+ +.+|++++. ||.|++||+.+++
T Consensus 173 l~s--------gs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~-Dg~I~iwd~~~~~ 240 (753)
T 3jro_A 173 FVT--------GGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQ-DRTCIIWTQDNEQ 240 (753)
T ss_dssp EEE--------EETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEES-SSCEEEEEESSSS
T ss_pred EEE--------EECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEec-CCEEEEecCCCCC
Confidence 887 455999999999876 55667777776 999999999 999999999 9999999998863
No 120
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.93 E-value=9.5e-25 Score=184.68 Aligned_cols=232 Identities=10% Similarity=0.050 Sum_probs=171.3
Q ss_pred cceeeeCCCc-cEEEeccCCceeeEEE-eeEEeeccccccccCCCCchhhhhhcccccchhhhhccCCCcccccccCCCC
Q psy3337 2 NCDVHSNGKN-IYVVAGQENSNQLYKI-TAEFTQMNGVVKSKESNNTADTIVRKRKEKDKENAKQKGGKKEKSNEKGKNK 79 (297)
Q Consensus 2 ~~~~~~~~~~-~~~~~g~d~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (297)
+|..|+++++ +|++|+.|+.+++|++ ....... . ....+ ...- ....-
T Consensus 60 ~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~---~-~~~~~----~~~v--~~l~~-------------------- 109 (342)
T 1yfq_A 60 LCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQA---L-TNNEA----NLGI--CRICK-------------------- 109 (342)
T ss_dssp EEEEEEESSSEEEEEEETTSCEEEECSSSSSSEEE---C-BSCCC----CSCE--EEEEE--------------------
T ss_pred EEEEECCCCCcEEEEEcCCCeEEEEEeccCCceEe---c-cccCC----CCce--EEEEe--------------------
Confidence 4566888889 9999999999999998 5432210 0 00000 0000 00000
Q ss_pred CCCCCCCCCcCCCCCCCceEEE-EeeC---------CCeEEEEecCCCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCC-
Q psy3337 80 KDKIEDPPILNSIDSKEKNLRF-GFKT---------FDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPK- 148 (297)
Q Consensus 80 ~~~~~~~~~l~~~~~~d~~i~~-~~~~---------~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~- 148 (297)
.+ .-+..+++.|+.|++ ++.+ ++.+..+ .|...|.+++|+|++ |++++.|+.|++||+++
T Consensus 110 ----~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~ 180 (342)
T 1yfq_A 110 ----YG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNT--KVKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLC 180 (342)
T ss_dssp ----ET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSS--SSCCCEEEEEECSSE--EEEEESTTEEEEEESSCC
T ss_pred ----CC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEE--eeCCceEEEEecCCc--EEEEeCCCeEEEEECCcc
Confidence 00 112457888999999 7776 6665555 488899999999987 99999999999999987
Q ss_pred Ce--eeEEeccccCCeeEEEEcc-CCCEEEEEeCCCcEEEEEcCCC------ceeeeeeccCCCCceEEEEeeeeeeeee
Q psy3337 149 MK--PLLHIEAHSKEIDDVDFSI-SGEQIVSIAKDGKAFVWNSKNG------SLSKELKWNTPDNIKYLFKRCRYGLVED 219 (297)
Q Consensus 149 ~~--~~~~~~~~~~~v~~~~~sp-~~~~l~s~~~d~~v~lwd~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (297)
+. .......|...|.+++|+| ++++|++++.|+.|++|++... +....+..|...... .-....+..++|
T Consensus 181 ~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~ 259 (342)
T 1yfq_A 181 EDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKD-TNLAYPVNSIEF 259 (342)
T ss_dssp TTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTC-CSSCCCEEEEEE
T ss_pred ccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccc-cccceeEEEEEE
Confidence 54 3344556888999999999 9999999999999999999876 667777666421000 000113445889
Q ss_pred CCCCeEEEEeccCcccccCCCCeEEEEeCCCCceEEEeccC-CC-eEEEEEcCCCCEEEEEecCCCe
Q psy3337 220 SPKRSRLFTLANPLAQNKRGISYVQQWDVDSGRLRLAREMK-ES-LSALAVRDDGRFVAVGTMFTGS 284 (297)
Q Consensus 220 s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~-~~-v~~~~~s~dg~~l~~~~~~dg~ 284 (297)
+|++.+|++++ .|+.|++||+.+++.+..+..| .. |.+++ |++++|++++. ||.
T Consensus 260 s~~~~~l~~~~--------~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~--~~~~~l~s~s~-Dg~ 315 (342)
T 1yfq_A 260 SPRHKFLYTAG--------SDGIISCWNLQTRKKIKNFAKFNEDSVVKIA--CSDNILCLATS-DDT 315 (342)
T ss_dssp CTTTCCEEEEE--------TTSCEEEEETTTTEEEEECCCCSSSEEEEEE--ECSSEEEEEEE-CTH
T ss_pred cCCCCEEEEec--------CCceEEEEcCccHhHhhhhhcccCCCceEec--CCCCeEEEEec-CCc
Confidence 99999999854 4999999999999999999987 66 99999 99999999999 998
No 121
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.93 E-value=1.6e-23 Score=183.08 Aligned_cols=187 Identities=10% Similarity=0.107 Sum_probs=154.5
Q ss_pred CCCCCCCceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCEEE-EEcCCCcEEEEeCCCCeeeEEeccccCCeeEEEE
Q psy3337 90 NSIDSKEKNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDLMV-TGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDF 167 (297)
Q Consensus 90 ~~~~~~d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~-s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~ 167 (297)
..+++.|+.|++ ++.+++.+..+. .|...+.+++|+|+++.++ +++.|+.|++||+.+++.+..+..+ ..+.+++|
T Consensus 184 ~~s~~~d~~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~ 261 (433)
T 3bws_A 184 WVSQMQANAVHVFDLKTLAYKATVD-LTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKI-GLPRGLLL 261 (433)
T ss_dssp EEEEGGGTEEEEEETTTCCEEEEEE-CSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCC-SEEEEEEE
T ss_pred EEEECCCCEEEEEECCCceEEEEEc-CCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCC-CCceEEEE
Confidence 456778899999 999999988888 8999999999999998874 5568999999999999988888754 45999999
Q ss_pred ccCCCEEEEEe--------CCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCC
Q psy3337 168 SISGEQIVSIA--------KDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRG 239 (297)
Q Consensus 168 sp~~~~l~s~~--------~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~ 239 (297)
+|++++|++++ .|+.|++||+.+++.+..+... .....++|+|+++.++.. ++.
T Consensus 262 ~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~-----------~~~~~~~~~~~g~~l~~~-------~~~ 323 (433)
T 3bws_A 262 SKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPP-----------GNKRHIVSGNTENKIYVS-------DMC 323 (433)
T ss_dssp CTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEE-----------ECEEEEEECSSTTEEEEE-------ETT
T ss_pred cCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCC-----------CCcceEEECCCCCEEEEE-------ecC
Confidence 99999999887 5889999999988776554221 123357899999766554 345
Q ss_pred CCeEEEEeCCCCceEEEeccCCCeEEEEEcCCCCEEEEEecC--------------CCeEEEEEeCCceec
Q psy3337 240 ISYVQQWDVDSGRLRLAREMKESLSALAVRDDGRFVAVGTMF--------------TGSVFVYIAFSLQMC 296 (297)
Q Consensus 240 d~~i~~wd~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~--------------dg~i~vwd~~~~~~~ 296 (297)
++.|++||+.+++.+..+.....+.+++|+|+|++|++++.. ||.|++||+.+++.+
T Consensus 324 ~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~ 394 (433)
T 3bws_A 324 CSKIEVYDLKEKKVQKSIPVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVK 394 (433)
T ss_dssp TTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEE
T ss_pred CCEEEEEECCCCcEEEEecCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEE
Confidence 899999999999988888766669999999999999888762 259999999988764
No 122
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.93 E-value=7.8e-24 Score=185.04 Aligned_cols=243 Identities=15% Similarity=0.105 Sum_probs=179.7
Q ss_pred cceeeeCCCccEEEeccCCceeeEEEeeEEeeccccccccCCCCchhhhhhcccccchhhhhccCCCcccccccCCCCCC
Q psy3337 2 NCDVHSNGKNIYVVAGQENSNQLYKITAEFTQMNGVVKSKESNNTADTIVRKRKEKDKENAKQKGGKKEKSNEKGKNKKD 81 (297)
Q Consensus 2 ~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (297)
+|..+++++..|++++.|+.+++|++.......... ... .. -... .
T Consensus 173 ~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~--~~~---~~------~~~~-----------------------~ 218 (433)
T 3bws_A 173 ETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVD--LTG---KW------SKIL-----------------------L 218 (433)
T ss_dssp EEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEE--CSS---SS------EEEE-----------------------E
T ss_pred eEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEc--CCC---CC------eeEE-----------------------E
Confidence 345677888999999999999999985422110000 000 00 0000 0
Q ss_pred CCCCCCCcCCCCCCCceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCEEEEEc--------CCCcEEEEeCCCCeee
Q psy3337 82 KIEDPPILNSIDSKEKNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGG--------TDGHLRLWSFPKMKPL 152 (297)
Q Consensus 82 ~~~~~~~l~~~~~~d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~--------~d~~i~iwd~~~~~~~ 152 (297)
...+...+..++..|+.|++ ++.+++.+..+. . ...+.+++|+|++++|++++ .|+.|++||+.+++.+
T Consensus 219 ~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~-~-~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~ 296 (433)
T 3bws_A 219 YDPIRDLVYCSNWISEDISVIDRKTKLEIRKTD-K-IGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLI 296 (433)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTTTEEEEECC-C-CSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEE
T ss_pred EcCCCCEEEEEecCCCcEEEEECCCCcEEEEec-C-CCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEE
Confidence 00111122345667899999 988888877775 3 45589999999999999887 5889999999998877
Q ss_pred EEeccccCCeeEEEEccCCCEE-EEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEecc
Q psy3337 153 LHIEAHSKEIDDVDFSISGEQI-VSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLAN 231 (297)
Q Consensus 153 ~~~~~~~~~v~~~~~sp~~~~l-~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~ 231 (297)
..+ .|...+.+++|+|+++.+ ++++.|+.|++||+.+++.+..+.... ....++|+|+++++++...
T Consensus 297 ~~~-~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~-----------~~~~~~~s~dg~~l~~~~~ 364 (433)
T 3bws_A 297 DTI-GPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIPVFD-----------KPNTIALSPDGKYLYVSCR 364 (433)
T ss_dssp EEE-EEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEECSS-----------SEEEEEECTTSSEEEEEEC
T ss_pred eec-cCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEecCCC-----------CCCeEEEcCCCCEEEEEec
Confidence 665 466689999999999755 566899999999999888777664221 1235889999998888765
Q ss_pred C-------cccccCCCCeEEEEeCCCCceEEEeccCCCeEEEEEcCCCCEEEEEecCCCeEEEEEeCC
Q psy3337 232 P-------LAQNKRGISYVQQWDVDSGRLRLAREMKESLSALAVRDDGRFVAVGTMFTGSVFVYIAFS 292 (297)
Q Consensus 232 ~-------~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~ 292 (297)
. .+++|+.||.|++||+.+++.+..+..+..+.+++|+|+|++|++++..|+.|++|++..
T Consensus 365 ~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 365 GPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAGNQPTGLDVSPDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp CCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECSSSEEEEEECTTSCEEEEEETTTTEEEEEEETT
T ss_pred CCCccccccccccccceEEEEEECCCCcEEEEecCCCCCceEEEcCCCCEEEEEECCCCeEEEEEecC
Confidence 2 455666789999999999999998888777999999999999987763399999999864
No 123
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.93 E-value=4.5e-24 Score=188.15 Aligned_cols=148 Identities=11% Similarity=0.127 Sum_probs=120.2
Q ss_pred cEEEEEEecCCCEEEEEcCCCcEEEEeCCCCee-------eEEe----ccccCCeeEEEEccCCCEEEEEeCCCcEEEEE
Q psy3337 119 LQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKP-------LLHI----EAHSKEIDDVDFSISGEQIVSIAKDGKAFVWN 187 (297)
Q Consensus 119 ~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~-------~~~~----~~~~~~v~~~~~sp~~~~l~s~~~d~~v~lwd 187 (297)
.|.+++|||||++|++|+.||+|+|||+.++.. +.++ .+|...|.+++|+|+| +++++.|++|++||
T Consensus 131 sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd 208 (588)
T 2j04_A 131 TYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMT 208 (588)
T ss_dssp CEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEEC
T ss_pred cEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEE
Confidence 488999999999999999999999999988752 5666 6788899999999999 88889999999999
Q ss_pred cCCCce---eeeee-ccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCCCceEEEeccCCC-
Q psy3337 188 SKNGSL---SKELK-WNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSGRLRLAREMKES- 262 (297)
Q Consensus 188 ~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~- 262 (297)
+..+.. ..++. .|. ..+..++|+ +..|+++ + ++.|++||+.+++......+|..
T Consensus 209 ~~~~~~~~~~~tL~~~h~----------~~V~svaFs--g~~LASa--------~-~~tIkLWd~~~~~~~~~~~gh~~~ 267 (588)
T 2j04_A 209 VSASSHQPVSRMIQNASR----------RKITDLKIV--DYKVVLT--------C-PGYVHKIDLKNYSISSLKTGSLEN 267 (588)
T ss_dssp CCSSSSCCCEEEEECCCS----------SCCCCEEEE--TTEEEEE--------C-SSEEEEEETTTTEEEEEECSCCSC
T ss_pred CCCCccccceeeeccccc----------CcEEEEEEE--CCEEEEE--------e-CCeEEEEECCCCeEEEEEcCCCce
Confidence 987663 23442 332 123457788 5777774 2 68999999998877444435665
Q ss_pred eEEEEE--cCCCCEEEEEecCCCeEEEEEeC
Q psy3337 263 LSALAV--RDDGRFVAVGTMFTGSVFVYIAF 291 (297)
Q Consensus 263 v~~~~~--s~dg~~l~~~~~~dg~i~vwd~~ 291 (297)
|..++| +||+..|+++.+ ||+ ++|...
T Consensus 268 V~~va~~~s~d~~~La~a~e-dG~-klw~~d 296 (588)
T 2j04_A 268 FHIIPLNHEKESTILLMSNK-TSY-KVLLED 296 (588)
T ss_dssp CCEEEETTCSSCEEEEECSS-CEE-EEEESS
T ss_pred EEEEEeeeCCCCCEEEEEcC-CCC-EEEeec
Confidence 999999 999999999999 999 999875
No 124
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.92 E-value=5.3e-24 Score=181.37 Aligned_cols=189 Identities=13% Similarity=0.128 Sum_probs=138.8
Q ss_pred CCCCCCceEEE-EeeCCCeEEEEecCCCCcEEEEEE--ecCCCEEEEEcCCCcEEEEeCCCCeeeEEecccc--------
Q psy3337 91 SIDSKEKNLRF-GFKTFDSVQTVFAGSESLQRVVRL--SRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHS-------- 159 (297)
Q Consensus 91 ~~~~~d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~--s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-------- 159 (297)
.+++.|+.|++ ++.+++.+. +. +|...|.+++| +|++++|++++.|+.|++||+++++.+..+..|.
T Consensus 102 ~s~~~dg~v~iwd~~~~~~~~-~~-~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~ 179 (368)
T 3mmy_A 102 FTASCDKTAKMWDLSSNQAIQ-IA-QHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVI 179 (368)
T ss_dssp EEEETTSEEEEEETTTTEEEE-EE-ECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEE
T ss_pred EEEcCCCcEEEEEcCCCCcee-ec-cccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEec
Confidence 35556666666 666555554 34 79999999999 8899999999999999999998887766665433
Q ss_pred ---------------------------------CCeeEEEEccCCCE----EEEEeCCCcEEEEEcCCC---ceeeeeec
Q psy3337 160 ---------------------------------KEIDDVDFSISGEQ----IVSIAKDGKAFVWNSKNG---SLSKELKW 199 (297)
Q Consensus 160 ---------------------------------~~v~~~~~sp~~~~----l~s~~~d~~v~lwd~~~~---~~~~~~~~ 199 (297)
..+.++.+.++... +++++.|+.|++||++.. ..+..+..
T Consensus 180 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~ 259 (368)
T 3mmy_A 180 YPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKC 259 (368)
T ss_dssp TTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEEC
T ss_pred CCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeee
Confidence 23344555444433 888899999999998876 44555555
Q ss_pred cCCCCc--eEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCCCceEEEeccCCC-eEEEEEcCCCCEEE
Q psy3337 200 NTPDNI--KYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSGRLRLAREMKES-LSALAVRDDGRFVA 276 (297)
Q Consensus 200 ~~~~~~--~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~-v~~~~~s~dg~~l~ 276 (297)
|..... ........+..++|+|++.+|++++ .|+.|++||+.+++++..+..|.. |.+++|+|+|++|+
T Consensus 260 ~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~--------~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~ 331 (368)
T 3mmy_A 260 HRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVG--------SDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFA 331 (368)
T ss_dssp SEEC----CCCEEECCEEEEEECTTTCCEEEEE--------TTSCEEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEE
T ss_pred eecccccccccccccceEEEEEecCCCEEEEEc--------cCCeEEEEECCCCcEEEEecCCCCCceEEEECCCCCeEE
Confidence 431100 0000111356789999999999954 499999999999999999998776 99999999999999
Q ss_pred EEecCCCeEEEEEe
Q psy3337 277 VGTMFTGSVFVYIA 290 (297)
Q Consensus 277 ~~~~~dg~i~vwd~ 290 (297)
+++. |+..+.|++
T Consensus 332 ~~s~-d~~~~~~~~ 344 (368)
T 3mmy_A 332 YASS-YDWSKGHEF 344 (368)
T ss_dssp EEEC-CCSTTCGGG
T ss_pred EEec-ccccccccc
Confidence 9998 876555544
No 125
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.91 E-value=1.3e-22 Score=168.67 Aligned_cols=190 Identities=13% Similarity=0.070 Sum_probs=137.5
Q ss_pred CceEEE-EeeCC---CeEEEEecCCCC-------------------------cEEEEEEecC----CCEEEEEcC-----
Q psy3337 96 EKNLRF-GFKTF---DSVQTVFAGSES-------------------------LQRVVRLSRN----GDLMVTGGT----- 137 (297)
Q Consensus 96 d~~i~~-~~~~~---~~~~~~~~~h~~-------------------------~v~~~~~s~~----g~~l~s~~~----- 137 (297)
..+|++ ++.++ +.++++. +|+. .|.+++|+|| ++++++++.
T Consensus 62 ~~~v~lw~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~spd~~~~~~~l~s~g~~~~v~ 140 (356)
T 2w18_A 62 EDVVSLWKALDAWQWEKLYTWH-FAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCSSDDESEKQVLLKSGNIKAVL 140 (356)
T ss_dssp SSEEEEEEESSSSBEEEEEEEE-CCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC------CCEEEEEEEEEEEEE
T ss_pred cceEEEcccCCCccceeeEEEe-ccCceeEEEEEcCcccceeeeeeccccccceEEEEECCCccccccEEEeCCCeEEEE
Confidence 456777 66666 5555555 5554 5667777778 777776553
Q ss_pred ---------------CCcEEEEeC-CCCeeeEEeccccCCeeEEEEcc---CCCEEEEEeCCCcEEEEEcCCCceeeeee
Q psy3337 138 ---------------DGHLRLWSF-PKMKPLLHIEAHSKEIDDVDFSI---SGEQIVSIAKDGKAFVWNSKNGSLSKELK 198 (297)
Q Consensus 138 ---------------d~~i~iwd~-~~~~~~~~~~~~~~~v~~~~~sp---~~~~l~s~~~d~~v~lwd~~~~~~~~~~~ 198 (297)
|+.|++|++ .+++.+..+..|...++.++|+| ++.+|++++.|++|+|||+.+|+.++++.
T Consensus 141 ~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~ 220 (356)
T 2w18_A 141 GLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMH 220 (356)
T ss_dssp EETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred ecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEc
Confidence 888999998 45777788888998999999998 77999999999999999999999999997
Q ss_pred ccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccC----cccccCCCCeEEEEeCCCCceEEEe-----ccCCC-eEEEEE
Q psy3337 199 WNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANP----LAQNKRGISYVQQWDVDSGRLRLAR-----EMKES-LSALAV 268 (297)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~----~~~~g~~d~~i~~wd~~~~~~~~~~-----~~~~~-v~~~~~ 268 (297)
.|... . ..+..++|+|+|.++++.+.+ .+++|+.|++|++||..+++.+..+ .+|.. +.+..+
T Consensus 221 g~~~~----v---~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~ 293 (356)
T 2w18_A 221 IDDSY----Q---ASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDV 293 (356)
T ss_dssp CCC----------CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEE
T ss_pred CCCcc----e---eeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEcccc
Confidence 55311 0 123346799999998876653 4678999999999999999887665 24433 444444
Q ss_pred cCCCCEEEEEecCCCeEEEEEeCCceec
Q psy3337 269 RDDGRFVAVGTMFTGSVFVYIAFSLQMC 296 (297)
Q Consensus 269 s~dg~~l~~~~~~dg~i~vwd~~~~~~~ 296 (297)
++.++++++. |++|+|||+.+++.+
T Consensus 294 --sg~~lASgS~-DgTIkIWDl~tGk~l 318 (356)
T 2w18_A 294 --KDHCAAAILT-SGTIAIWDLLLGQCT 318 (356)
T ss_dssp --ETTEEEEEET-TSCEEEEETTTCSEE
T ss_pred --CCCEEEEEcC-CCcEEEEECCCCcEE
Confidence 4889999999 999999999998865
No 126
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.89 E-value=1.7e-21 Score=166.32 Aligned_cols=179 Identities=13% Similarity=0.120 Sum_probs=130.8
Q ss_pred CCCCCceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCEE-EEEcCCCcEEEEeCCCCeeeEEeccccCCeeEEEEcc
Q psy3337 92 IDSKEKNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDLM-VTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSI 169 (297)
Q Consensus 92 ~~~~d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l-~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp 169 (297)
+++.+ .+++ +..+++...... .+ .+..+++.++++.+ ++++.|++|++||+.+++.+..+. |...|.+++|++
T Consensus 36 ~g~~~-~~~iw~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~-~~~~v~~v~~~~ 110 (355)
T 3vu4_A 36 LSTLK-SFEIYNVHPVAHIMSQE-MR--HLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIK-VDAPVKDLFLSR 110 (355)
T ss_dssp EECSS-EEEEEEETTEEEEEEEE-CS--CCCEEEECTTSSEEEEECSSTTEEEEEETTTTEEEEEEE-CSSCEEEEEECS
T ss_pred EEcCC-EEEEEecCCcceeeeee-cC--CeEEEEEcCCCCEEEEEECCccEEEEEECCCCcEEEEEE-CCCceEEEEEcC
Confidence 45555 4678 777665554443 22 47788999988877 567888999999999999988886 666899999987
Q ss_pred CCC-----------------------------------EEEE--EeCCCcEEEEEcCCCce----------------eee
Q psy3337 170 SGE-----------------------------------QIVS--IAKDGKAFVWNSKNGSL----------------SKE 196 (297)
Q Consensus 170 ~~~-----------------------------------~l~s--~~~d~~v~lwd~~~~~~----------------~~~ 196 (297)
+.. +++. ++.||.|++||+.++.. +..
T Consensus 111 ~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~ 190 (355)
T 3vu4_A 111 EFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVL 190 (355)
T ss_dssp SEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEESSCTTCEEEEECCC------------------CCEE
T ss_pred CEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEE
Confidence 631 1222 23445555555544320 222
Q ss_pred eeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCe-EEEEeCCCCceEEEec-c-CCC-eEEEEEcCCC
Q psy3337 197 LKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISY-VQQWDVDSGRLRLARE-M-KES-LSALAVRDDG 272 (297)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~-i~~wd~~~~~~~~~~~-~-~~~-v~~~~~s~dg 272 (297)
+..|. ..+..++|+|++.+|++++ .|++ |++||+++++++..+. + |.. |.+++|+|+|
T Consensus 191 ~~~h~----------~~v~~~~~s~~g~~l~s~s--------~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~ 252 (355)
T 3vu4_A 191 IKAHT----------NPIKMVRLNRKSDMVATCS--------QDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDG 252 (355)
T ss_dssp ECCCS----------SCEEEEEECTTSSEEEEEE--------TTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTS
T ss_pred EEccC----------CceEEEEECCCCCEEEEEe--------CCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCC
Confidence 33222 2355689999999999954 5998 9999999999999998 4 555 9999999999
Q ss_pred CEEEEEecCCCeEEEEEeCCce
Q psy3337 273 RFVAVGTMFTGSVFVYIAFSLQ 294 (297)
Q Consensus 273 ~~l~~~~~~dg~i~vwd~~~~~ 294 (297)
++|++++. |++|++||+.+..
T Consensus 253 ~~l~s~s~-d~~v~iw~~~~~~ 273 (355)
T 3vu4_A 253 SKLAVVSD-KWTLHVFEIFNDQ 273 (355)
T ss_dssp CEEEEEET-TCEEEEEESSCCS
T ss_pred CEEEEEEC-CCEEEEEEccCCC
Confidence 99999999 9999999997653
No 127
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.89 E-value=7.7e-22 Score=172.78 Aligned_cols=160 Identities=12% Similarity=0.003 Sum_probs=126.4
Q ss_pred CCCCcEEEEEEecCCCEEE----EEcCCCcEEEEeCCCC--------ee---eEEeccccCCeeEEEEccC-CCEEEEEe
Q psy3337 115 GSESLQRVVRLSRNGDLMV----TGGTDGHLRLWSFPKM--------KP---LLHIEAHSKEIDDVDFSIS-GEQIVSIA 178 (297)
Q Consensus 115 ~h~~~v~~~~~s~~g~~l~----s~~~d~~i~iwd~~~~--------~~---~~~~~~~~~~v~~~~~sp~-~~~l~s~~ 178 (297)
.+...|++++|+|+|++|+ +|+.|+.|+|||+.++ ++ +..+.+|...|.+++|+|+ +.+|++++
T Consensus 90 ~~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s 169 (434)
T 2oit_A 90 PMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCL 169 (434)
T ss_dssp CCSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEE
T ss_pred cCCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEE
Confidence 6778899999999999999 8899999999998654 22 4566779999999999997 88999999
Q ss_pred CCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCCCceEEEec
Q psy3337 179 KDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSGRLRLARE 258 (297)
Q Consensus 179 ~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~ 258 (297)
.|++|++||++++..+.....|. ..+..++|+|+|++|+++ +.|+.|++||++ ++....+.
T Consensus 170 ~Dg~v~iwD~~~~~~~~~~~~~~----------~~v~~v~wspdg~~lasg--------s~dg~v~iwd~~-~~~~~~~~ 230 (434)
T 2oit_A 170 ADGSIAVLQVTETVKVCATLPST----------VAVTSVCWSPKGKQLAVG--------KQNGTVVQYLPT-LQEKKVIP 230 (434)
T ss_dssp TTSCEEEEEESSSEEEEEEECGG----------GCEEEEEECTTSSCEEEE--------ETTSCEEEECTT-CCEEEEEC
T ss_pred CCCeEEEEEcCCCcceeeccCCC----------CceeEEEEcCCCCEEEEE--------cCCCcEEEEccC-Cccccccc
Confidence 99999999999886554444332 234458899999999994 459999999999 66555554
Q ss_pred cC-------C-CeEEEEEcCCCCEEEEEecCCC------eEEEEEeCCc
Q psy3337 259 MK-------E-SLSALAVRDDGRFVAVGTMFTG------SVFVYIAFSL 293 (297)
Q Consensus 259 ~~-------~-~v~~~~~s~dg~~l~~~~~~dg------~i~vwd~~~~ 293 (297)
.+ . .|.+++|++++.++++.+..+| .+++|++.+.
T Consensus 231 ~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 231 CPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp CCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred CCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 32 1 4899999999888865443243 3899999764
No 128
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.89 E-value=2.1e-21 Score=169.17 Aligned_cols=178 Identities=13% Similarity=0.137 Sum_probs=138.0
Q ss_pred ceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCEEEEEcCCC---cEEEEeCCCCeeeEEeccccCCeeEEEEccCCC
Q psy3337 97 KNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDG---HLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGE 172 (297)
Q Consensus 97 ~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~---~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~ 172 (297)
++|++ +.. +.....+. +|...|.+++|+|||++|++++.++ .|++||+.+++.. .+..|...+.+++|+|||+
T Consensus 159 ~~i~i~d~~-g~~~~~l~-~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~spdg~ 235 (415)
T 2hqs_A 159 YELRVSDYD-GYNQFVVH-RSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGS 235 (415)
T ss_dssp EEEEEEETT-SCSCEEEE-EESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECTTSS
T ss_pred ceEEEEcCC-CCCCEEEe-CCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-EeecCCCcccCEEEcCCCC
Confidence 78999 765 45566776 8899999999999999999999885 9999999988765 5667888999999999999
Q ss_pred EEE-EEeCCCc--EEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCC
Q psy3337 173 QIV-SIAKDGK--AFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVD 249 (297)
Q Consensus 173 ~l~-s~~~d~~--v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~ 249 (297)
+|+ +++.|+. |++||+.+++. ..+..+. ..+..++|+|||+.|++.+. ......|++||+.
T Consensus 236 ~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~----------~~~~~~~~spdg~~l~~~s~-----~~g~~~i~~~d~~ 299 (415)
T 2hqs_A 236 KLAFALSKTGSLNLYVMDLASGQI-RQVTDGR----------SNNTEPTWFPDSQNLAFTSD-----QAGRPQVYKVNIN 299 (415)
T ss_dssp EEEEEECTTSSCEEEEEETTTCCE-EECCCCS----------SCEEEEEECTTSSEEEEEEC-----TTSSCEEEEEETT
T ss_pred EEEEEEecCCCceEEEEECCCCCE-EeCcCCC----------CcccceEECCCCCEEEEEEC-----CCCCcEEEEEECC
Confidence 888 6666654 99999988765 3444332 12334789999999888653 1112378889999
Q ss_pred CCceEEEeccCCC-eEEEEEcCCCCEEEEEecCC---CeEEEEEeCCcee
Q psy3337 250 SGRLRLAREMKES-LSALAVRDDGRFVAVGTMFT---GSVFVYIAFSLQM 295 (297)
Q Consensus 250 ~~~~~~~~~~~~~-v~~~~~s~dg~~l~~~~~~d---g~i~vwd~~~~~~ 295 (297)
+++... +..+.. +.+++|+|||++|++++. + ..|++||+.+++.
T Consensus 300 ~~~~~~-l~~~~~~~~~~~~spdG~~l~~~~~-~~g~~~i~~~d~~~~~~ 347 (415)
T 2hqs_A 300 GGAPQR-ITWEGSQNQDADVSSDGKFMVMVSS-NGGQQHIAKQDLATGGV 347 (415)
T ss_dssp SSCCEE-CCCSSSEEEEEEECTTSSEEEEEEE-CSSCEEEEEEETTTCCE
T ss_pred CCCEEE-EecCCCcccCeEECCCCCEEEEEEC-cCCceEEEEEECCCCCE
Confidence 877543 333444 899999999999998886 4 5899999988764
No 129
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.87 E-value=2.7e-20 Score=156.68 Aligned_cols=192 Identities=16% Similarity=0.209 Sum_probs=148.0
Q ss_pred CCCCCCceEEE-EeeCCCeEEEEecCC----CCcEEEEEEecCCCEEEEEc------------CCCcEEEEeCCCCeeeE
Q psy3337 91 SIDSKEKNLRF-GFKTFDSVQTVFAGS----ESLQRVVRLSRNGDLMVTGG------------TDGHLRLWSFPKMKPLL 153 (297)
Q Consensus 91 ~~~~~d~~i~~-~~~~~~~~~~~~~~h----~~~v~~~~~s~~g~~l~s~~------------~d~~i~iwd~~~~~~~~ 153 (297)
.+...++.|.+ ++.+++.+..+..++ ...+..++|+|+|++|+++. .++.|.+||+.+++.+.
T Consensus 50 v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~ 129 (337)
T 1pby_B 50 ATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRK 129 (337)
T ss_dssp EEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEE
T ss_pred EEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEE
Confidence 35556788998 999998887776232 22566899999999988886 57999999999988877
Q ss_pred EeccccCCeeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeeccC--------CCCce-------------------
Q psy3337 154 HIEAHSKEIDDVDFSISGEQIVSIAKDGKAFVWNSKNGSLSKELKWNT--------PDNIK------------------- 206 (297)
Q Consensus 154 ~~~~~~~~v~~~~~sp~~~~l~s~~~d~~v~lwd~~~~~~~~~~~~~~--------~~~~~------------------- 206 (297)
.+.. ...+.+++|+|++++|+++ ++.|++||+.+++.+..+..+. |++..
T Consensus 130 ~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~ 206 (337)
T 1pby_B 130 AFEA-PRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTAR 206 (337)
T ss_dssp EEEC-CSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEB
T ss_pred EEeC-CCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccc
Confidence 7764 4568899999999988887 6889999999888766554322 11100
Q ss_pred ---------------EEEEe--------------eeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCCCceEEEe
Q psy3337 207 ---------------YLFKR--------------CRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSGRLRLAR 257 (297)
Q Consensus 207 ---------------~~~~~--------------~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~ 257 (297)
..+.. .....++|+|++++++++ ++.|.+||+.+++.+..+
T Consensus 207 ~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~----------~~~v~~~d~~~~~~~~~~ 276 (337)
T 1pby_B 207 KDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA----------YNVLESFDLEKNASIKRV 276 (337)
T ss_dssp TTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE----------ESEEEEEETTTTEEEEEE
T ss_pred cccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe----------CCeEEEEECCCCcCccee
Confidence 00000 012248899999988874 589999999999988888
Q ss_pred ccCCCeEEEEEcCCCCEEEEEecCCCeEEEEEeCCceec
Q psy3337 258 EMKESLSALAVRDDGRFVAVGTMFTGSVFVYIAFSLQMC 296 (297)
Q Consensus 258 ~~~~~v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~~~~~ 296 (297)
..+..+.+++|+|||++|++++. ++.|.+||+.+++.+
T Consensus 277 ~~~~~~~~~~~s~dg~~l~~~~~-~~~i~v~d~~~~~~~ 314 (337)
T 1pby_B 277 PLPHSYYSVNVSTDGSTVWLGGA-LGDLAAYDAETLEKK 314 (337)
T ss_dssp ECSSCCCEEEECTTSCEEEEESB-SSEEEEEETTTCCEE
T ss_pred cCCCceeeEEECCCCCEEEEEcC-CCcEEEEECcCCcEE
Confidence 77666899999999999999988 999999999988754
No 130
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.86 E-value=3e-20 Score=156.52 Aligned_cols=191 Identities=15% Similarity=0.054 Sum_probs=139.8
Q ss_pred CCCCCCCceEEE-EeeCCCe-EEEEecCCCCcEEEEEEecCCCEEEEEcCCC---cEEEEeCCCCeeeEEeccccCCeeE
Q psy3337 90 NSIDSKEKNLRF-GFKTFDS-VQTVFAGSESLQRVVRLSRNGDLMVTGGTDG---HLRLWSFPKMKPLLHIEAHSKEIDD 164 (297)
Q Consensus 90 ~~~~~~d~~i~~-~~~~~~~-~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~---~i~iwd~~~~~~~~~~~~~~~~v~~ 164 (297)
..+...++.|++ +..+++. ...+. .+..+..+++|+|+|++|+++..++ .|.+||+.+++.+..+..+ ....+
T Consensus 55 ~~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~-~~~~~ 132 (331)
T 3u4y_A 55 VVTSDFCQTLVQIETQLEPPKVVAIQ-EGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIP-YDAVG 132 (331)
T ss_dssp EEEESTTCEEEEEECSSSSCEEEEEE-ECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECC-TTEEE
T ss_pred EEEeCCCCeEEEEECCCCceeEEecc-cCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECC-CCccc
Confidence 334555778888 9999887 66665 5666655599999999999655553 8999999999888777644 45789
Q ss_pred EEEccCCCEEEEE-eCCCc-EEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCe
Q psy3337 165 VDFSISGEQIVSI-AKDGK-AFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISY 242 (297)
Q Consensus 165 ~~~sp~~~~l~s~-~~d~~-v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~ 242 (297)
++|+|++++|+++ ..++. |.+|++.....+...... ..........++|+|+|++++.+. ..++.
T Consensus 133 ~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~------~~~~~~~~~~~~~spdg~~l~v~~-------~~~~~ 199 (331)
T 3u4y_A 133 IAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQE------FISGGTRPFNITFTPDGNFAFVAN-------LIGNS 199 (331)
T ss_dssp EEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEE------EECSSSSEEEEEECTTSSEEEEEE-------TTTTE
T ss_pred eEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCc------cccCCCCccceEECCCCCEEEEEe-------CCCCe
Confidence 9999999866554 55688 999998754333222100 000001123578999999776653 34789
Q ss_pred EEEEeCCCCce---EEEeccCCCeEEEEEcCCCCEEEEEecCCCeEEEEEeCCcee
Q psy3337 243 VQQWDVDSGRL---RLAREMKESLSALAVRDDGRFVAVGTMFTGSVFVYIAFSLQM 295 (297)
Q Consensus 243 i~~wd~~~~~~---~~~~~~~~~v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~~~~ 295 (297)
|.+||+.+++. +..+..+..+..++|+|||++|+++...++.|.+||+.+++.
T Consensus 200 v~v~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~ 255 (331)
T 3u4y_A 200 IGILETQNPENITLLNAVGTNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTL 255 (331)
T ss_dssp EEEEECSSTTSCEEEEEEECSSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEE
T ss_pred EEEEECCCCcccceeeeccCCCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCce
Confidence 99999999888 778877666899999999998776654378999999998875
No 131
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.86 E-value=7.3e-20 Score=159.46 Aligned_cols=177 Identities=10% Similarity=0.114 Sum_probs=136.7
Q ss_pred ceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCEEE-EEcCCCc--EEEEeCCCCeeeEEeccccCCeeEEEEccCCC
Q psy3337 97 KNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDLMV-TGGTDGH--LRLWSFPKMKPLLHIEAHSKEIDDVDFSISGE 172 (297)
Q Consensus 97 ~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~-s~~~d~~--i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~ 172 (297)
..|++ ++.+++.. .+. .|...+.+++|+|||++|+ +++.++. |++||+.+++. ..+..|...+.+++|+|+|+
T Consensus 203 ~~i~~~d~~tg~~~-~l~-~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~ 279 (415)
T 2hqs_A 203 SALVIQTLANGAVR-QVA-SFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQ 279 (415)
T ss_dssp CEEEEEETTTCCEE-EEE-CCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSS
T ss_pred cEEEEEECCCCcEE-Eee-cCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEECCCCC
Confidence 48999 88888775 455 7888999999999999887 6666654 99999988775 56777888999999999999
Q ss_pred EEEEEeC-CC--cEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCC
Q psy3337 173 QIVSIAK-DG--KAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVD 249 (297)
Q Consensus 173 ~l~s~~~-d~--~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~ 249 (297)
+|++++. ++ .|++||+.+++. ..+..+. . .+..++|+|+|++|++.+. ...+..|++||+.
T Consensus 280 ~l~~~s~~~g~~~i~~~d~~~~~~-~~l~~~~----~------~~~~~~~spdG~~l~~~~~-----~~g~~~i~~~d~~ 343 (415)
T 2hqs_A 280 NLAFTSDQAGRPQVYKVNINGGAP-QRITWEG----S------QNQDADVSSDGKFMVMVSS-----NGGQQHIAKQDLA 343 (415)
T ss_dssp EEEEEECTTSSCEEEEEETTSSCC-EECCCSS----S------EEEEEEECTTSSEEEEEEE-----CSSCEEEEEEETT
T ss_pred EEEEEECCCCCcEEEEEECCCCCE-EEEecCC----C------cccCeEECCCCCEEEEEEC-----cCCceEEEEEECC
Confidence 9988876 44 677889887754 3333222 1 1224789999999998654 1224689999999
Q ss_pred CCceEEEeccCCCeEEEEEcCCCCEEEEEecCCC---eEEEEEeCCce
Q psy3337 250 SGRLRLAREMKESLSALAVRDDGRFVAVGTMFTG---SVFVYIAFSLQ 294 (297)
Q Consensus 250 ~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~dg---~i~vwd~~~~~ 294 (297)
+++.. .+..+..+.+++|+|||++|++++. ++ .|++||+....
T Consensus 344 ~~~~~-~l~~~~~~~~~~~spdg~~l~~~s~-~~~~~~l~~~d~~g~~ 389 (415)
T 2hqs_A 344 TGGVQ-VLSSTFLDETPSLAPNGTMVIYSSS-QGMGSVLNLVSTDGRF 389 (415)
T ss_dssp TCCEE-ECCCSSSCEEEEECTTSSEEEEEEE-ETTEEEEEEEETTSCC
T ss_pred CCCEE-EecCCCCcCCeEEcCCCCEEEEEEc-CCCccEEEEEECCCCc
Confidence 88774 4444446999999999999998887 76 89999987543
No 132
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.86 E-value=7.5e-20 Score=164.46 Aligned_cols=198 Identities=10% Similarity=0.025 Sum_probs=152.8
Q ss_pred cCCCCCCCceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCEEEEEcCCCcEEEEeC--CCCeeeEEeccccCCeeEE
Q psy3337 89 LNSIDSKEKNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSF--PKMKPLLHIEAHSKEIDDV 165 (297)
Q Consensus 89 l~~~~~~d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~--~~~~~~~~~~~~~~~v~~~ 165 (297)
+..+++.|++|.+ |..+++.+.++..++. +.+++|+|||++|++++.|+.|.+||+ .+++.+..+. +...+..+
T Consensus 151 ~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~--~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~-~g~~p~~v 227 (543)
T 1nir_A 151 FSVTLRDAGQIALVDGDSKKIVKVIDTGYA--VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK-IGIEARSV 227 (543)
T ss_dssp EEEEEGGGTEEEEEETTTCCEEEEEECSTT--EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE-CCSEEEEE
T ss_pred EEEEEcCCCeEEEEECCCceEEEEEecCcc--cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe-cCCCcceE
Confidence 3456788999999 9999999998874444 889999999999999999999999999 8888888887 45568999
Q ss_pred EEcc----CCCEEEEEe-CCCcEEEEEcCCCceeeeeeccCCCCceEEEEe-eeeeeeeeCCCCeEEEEeccCcccccCC
Q psy3337 166 DFSI----SGEQIVSIA-KDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKR-CRYGLVEDSPKRSRLFTLANPLAQNKRG 239 (297)
Q Consensus 166 ~~sp----~~~~l~s~~-~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~l~~~~~~~~~~g~~ 239 (297)
+|+| +|++|++++ .+++|.+||..+++++..+..+........+.. .+...+.++|++..++.. ...
T Consensus 228 a~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs-------~~~ 300 (543)
T 1nir_A 228 ESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVN-------VKE 300 (543)
T ss_dssp EECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEE-------ETT
T ss_pred EeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEE-------ECC
Confidence 9999 999999888 489999999999998888764321000000111 134457889987766553 345
Q ss_pred CCeEEEEeCCCCceEE--EeccCCCeEEEEEcCCCCEEEEEecCCCeEEEEEeCCceec
Q psy3337 240 ISYVQQWDVDSGRLRL--AREMKESLSALAVRDDGRFVAVGTMFTGSVFVYIAFSLQMC 296 (297)
Q Consensus 240 d~~i~~wd~~~~~~~~--~~~~~~~v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~~~~~ 296 (297)
++.|.+||+.+.+.+. .+.....+..+.|+|+|++|++++..+++|.+||+.+++++
T Consensus 301 ~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~ 359 (543)
T 1nir_A 301 TGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLS 359 (543)
T ss_dssp TTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEE
T ss_pred CCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEE
Confidence 8999999998865433 44443448899999999987766543899999999998765
No 133
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.86 E-value=2.3e-19 Score=152.14 Aligned_cols=193 Identities=13% Similarity=0.074 Sum_probs=150.4
Q ss_pred CCCCCCCceEEE-EeeCCCeEEEEecCCCC--------cEEEEEEecCCCEEEEEc--CCCcEEEEeCCCCeeeEEeccc
Q psy3337 90 NSIDSKEKNLRF-GFKTFDSVQTVFAGSES--------LQRVVRLSRNGDLMVTGG--TDGHLRLWSFPKMKPLLHIEAH 158 (297)
Q Consensus 90 ~~~~~~d~~i~~-~~~~~~~~~~~~~~h~~--------~v~~~~~s~~g~~l~s~~--~d~~i~iwd~~~~~~~~~~~~~ 158 (297)
..+...++.|.+ +..+++.+..+..++.. .+.+++|+|+|+++++++ .++.|.+||+.+++.+..+..+
T Consensus 104 ~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~ 183 (353)
T 3vgz_A 104 WFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNT 183 (353)
T ss_dssp EEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCC
T ss_pred EEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCC
Confidence 334556778988 99999988887722221 268999999999877665 4788999999999988888766
Q ss_pred cCCeeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccC
Q psy3337 159 SKEIDDVDFSISGEQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKR 238 (297)
Q Consensus 159 ~~~v~~~~~sp~~~~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~ 238 (297)
...+.+++|+|++++|++++.++.|.+||+.+++.+..+......... ....++|+|++++++....
T Consensus 184 ~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~------~~~~~~~s~dg~~l~~~~~------- 250 (353)
T 3vgz_A 184 GKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEH------FFINISLDTARQRAFITDS------- 250 (353)
T ss_dssp CTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCC------CEEEEEEETTTTEEEEEES-------
T ss_pred CCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCc------ccceEEECCCCCEEEEEeC-------
Confidence 667899999999999999999999999999999887776542211001 1234779999998877543
Q ss_pred CCCeEEEEeCCCCceEEEeccCCCeEEEEEcCCCCEEEEEecCCCeEEEEEeCCceec
Q psy3337 239 GISYVQQWDVDSGRLRLAREMKESLSALAVRDDGRFVAVGTMFTGSVFVYIAFSLQMC 296 (297)
Q Consensus 239 ~d~~i~~wd~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~~~~~ 296 (297)
.++.|.+||+.+++.+..+..... ..++|+|+|++++++...++.|.+||+.+++.+
T Consensus 251 ~~~~v~~~d~~~~~~~~~~~~~~~-~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~ 307 (353)
T 3vgz_A 251 KAAEVLVVDTRNGNILAKVAAPES-LAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVV 307 (353)
T ss_dssp SSSEEEEEETTTCCEEEEEECSSC-CCEEEETTTTEEEEEETTTTEEEEEETTTTEEE
T ss_pred CCCEEEEEECCCCcEEEEEEcCCC-ceEEECCCCCEEEEEECCCCeEEEEECCCCeEE
Confidence 468999999999998888776543 679999999977666632899999999988764
No 134
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.85 E-value=5.4e-20 Score=155.68 Aligned_cols=244 Identities=11% Similarity=0.103 Sum_probs=164.9
Q ss_pred eeeCCCccEEEeccCCceeeEEEeeEEeeccccccccCCCCchhhhhhcccccchhhhhccCCCcccccccCCCCCCCCC
Q psy3337 5 VHSNGKNIYVVAGQENSNQLYKITAEFTQMNGVVKSKESNNTADTIVRKRKEKDKENAKQKGGKKEKSNEKGKNKKDKIE 84 (297)
Q Consensus 5 ~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (297)
.+.+++..|++++.++.+.+|++............... . ..... ...
T Consensus 6 ~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~-------~-------------------------~~~~~-~s~ 52 (349)
T 1jmx_B 6 ALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKF-------G-------------------------PGTAM-MAP 52 (349)
T ss_dssp CCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCC-------S-------------------------SCEEE-ECT
T ss_pred cccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCC-------C-------------------------CceeE-ECC
Confidence 36678888999999999999998653321100000000 0 00000 001
Q ss_pred CCCCcCCCCCCCceEEE-EeeCCCeEEEEecCC-----CCcEEEEEEecCCCEEEEEcCC------------CcEEEEeC
Q psy3337 85 DPPILNSIDSKEKNLRF-GFKTFDSVQTVFAGS-----ESLQRVVRLSRNGDLMVTGGTD------------GHLRLWSF 146 (297)
Q Consensus 85 ~~~~l~~~~~~d~~i~~-~~~~~~~~~~~~~~h-----~~~v~~~~~s~~g~~l~s~~~d------------~~i~iwd~ 146 (297)
+...+..+...++.|.+ ++.+++.+..+..++ ...+.+++|+|+|++|++++.+ +.|.+||+
T Consensus 53 dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~ 132 (349)
T 1jmx_B 53 DNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFST 132 (349)
T ss_dssp TSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEG
T ss_pred CCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEEC
Confidence 11112334556788988 998888877765233 2336789999999999988865 89999999
Q ss_pred CCCee---eEEeccccCCeeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeeccCCCC-----------------ce
Q psy3337 147 PKMKP---LLHIEAHSKEIDDVDFSISGEQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDN-----------------IK 206 (297)
Q Consensus 147 ~~~~~---~~~~~~~~~~v~~~~~sp~~~~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~-----------------~~ 206 (297)
.+++. +..+. +...+.+++|+|+++ +++++. .|.+||+.+++.+..+..+.... ..
T Consensus 133 ~~~~~~~~~~~~~-~~~~~~~~~~s~dg~-l~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (349)
T 1jmx_B 133 ADGLEAKPVRTFP-MPRQVYLMRAADDGS-LYVAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRH 208 (349)
T ss_dssp GGGGGBCCSEEEE-CCSSCCCEEECTTSC-EEEESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTC
T ss_pred CCccccceeeecc-CCCcccceeECCCCc-EEEccC--cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcce
Confidence 87543 33443 334688999999999 555544 49999999988776664331000 00
Q ss_pred -------EEEE----------------------------------eeeeeeeeeCC-CCeEEEEeccCcccccCCCCeEE
Q psy3337 207 -------YLFK----------------------------------RCRYGLVEDSP-KRSRLFTLANPLAQNKRGISYVQ 244 (297)
Q Consensus 207 -------~~~~----------------------------------~~~~~~~~~s~-~~~~l~~~~~~~~~~g~~d~~i~ 244 (297)
..+. ......++++| +++++++. ++.|.
T Consensus 209 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~----------~~~v~ 278 (349)
T 1jmx_B 209 EFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV----------LNRLA 278 (349)
T ss_dssp EEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE----------ESEEE
T ss_pred eEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE----------cCeEE
Confidence 0000 00223567789 99988874 57999
Q ss_pred EEeCCCCceEEEeccCCCeEEEEEcCCCCEEEEEecCCCeEEEEEeCCceec
Q psy3337 245 QWDVDSGRLRLAREMKESLSALAVRDDGRFVAVGTMFTGSVFVYIAFSLQMC 296 (297)
Q Consensus 245 ~wd~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~~~~~ 296 (297)
+||+.+++.+..+.....+.+++|+|+|++|++++. ++.|.+||+.+++.+
T Consensus 279 ~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~-~~~v~v~d~~~~~~~ 329 (349)
T 1jmx_B 279 KYDLKQRKLIKAANLDHTYYCVAFDKKGDKLYLGGT-FNDLAVFNPDTLEKV 329 (349)
T ss_dssp EEETTTTEEEEEEECSSCCCEEEECSSSSCEEEESB-SSEEEEEETTTTEEE
T ss_pred EEECccCeEEEEEcCCCCccceEECCCCCEEEEecC-CCeEEEEecccccee
Confidence 999999998888876666889999999999988888 999999999988765
No 135
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.84 E-value=6.8e-19 Score=148.46 Aligned_cols=188 Identities=12% Similarity=0.163 Sum_probs=127.2
Q ss_pred CCCCCCceEEE-Eee---CCCeEEEEecCCCCcEEEEEEecCCCEEEEEc-CCCcEEEEeCCC-CeeeE----Eecc-cc
Q psy3337 91 SIDSKEKNLRF-GFK---TFDSVQTVFAGSESLQRVVRLSRNGDLMVTGG-TDGHLRLWSFPK-MKPLL----HIEA-HS 159 (297)
Q Consensus 91 ~~~~~d~~i~~-~~~---~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~-~d~~i~iwd~~~-~~~~~----~~~~-~~ 159 (297)
.++..++.|.+ ++. +.+.+..+. ....+.+++|+|+|++|++++ .++.|.+||+.+ ++... .+.. ..
T Consensus 100 ~~~~~~~~i~~~d~~~~~~~~~~~~~~--~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~ 177 (343)
T 1ri6_A 100 VGSYNAGNVSVTRLEDGLPVGVVDVVE--GLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEG 177 (343)
T ss_dssp EEETTTTEEEEEEEETTEEEEEEEEEC--CCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTT
T ss_pred EEecCCCeEEEEECCCCcccccccccc--CCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCC
Confidence 34555788998 874 333444443 334578999999999888776 899999999987 54432 2222 33
Q ss_pred CCeeEEEEccCCCEEEEEe-CCCcEEEEEcCC--Cce--eeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcc
Q psy3337 160 KEIDDVDFSISGEQIVSIA-KDGKAFVWNSKN--GSL--SKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLA 234 (297)
Q Consensus 160 ~~v~~~~~sp~~~~l~s~~-~d~~v~lwd~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~ 234 (297)
..+..++|+|++++|++++ .++.|.+||+.. +.. ...+... +.... .......++|+|++++|+...
T Consensus 178 ~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~-~~~~~---~~~~~~~i~~s~dg~~l~v~~---- 249 (343)
T 1ri6_A 178 AGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMM-PENFS---DTRWAADIHITPDGRHLYACD---- 249 (343)
T ss_dssp CCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECS-CTTCC---SCCCEEEEEECTTSSEEEEEE----
T ss_pred CCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeecccc-Ccccc---ccCCccceEECCCCCEEEEEe----
Confidence 4788999999999776554 789999999953 432 2222111 11000 001122478999999887643
Q ss_pred cccCCCCeEEEEeCC--C--CceEEEeccCCCeEEEEEcCCCCEEEEEecCCCeEEEEEeC
Q psy3337 235 QNKRGISYVQQWDVD--S--GRLRLAREMKESLSALAVRDDGRFVAVGTMFTGSVFVYIAF 291 (297)
Q Consensus 235 ~~g~~d~~i~~wd~~--~--~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~dg~i~vwd~~ 291 (297)
..++.|.+||+. + .+.+..+..+..+.+++|+|+|++|++++..++.|.+|++.
T Consensus 250 ---~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d 307 (343)
T 1ri6_A 250 ---RTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIV 307 (343)
T ss_dssp ---TTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEEECTTTCEEEEEEEE
T ss_pred ---cCCCEEEEEEEcCCCCceEEeeeecCCCccceEEECCCCCEEEEecCCCCeEEEEEEc
Confidence 348999999998 2 34555555555589999999999988888428999999553
No 136
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.84 E-value=2.1e-19 Score=161.60 Aligned_cols=245 Identities=15% Similarity=0.084 Sum_probs=169.2
Q ss_pred ceeeeCCCccEEEeccCCceeeEEE--eeEEeeccccccccCCCCchhhhhhcccccchhhhhccCCCcccccccCCCCC
Q psy3337 3 CDVHSNGKNIYVVAGQENSNQLYKI--TAEFTQMNGVVKSKESNNTADTIVRKRKEKDKENAKQKGGKKEKSNEKGKNKK 80 (297)
Q Consensus 3 ~~~~~~~~~~~~~~g~d~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (297)
++.|+++|++|++++.|+.+.+|++ ....... .. ..+ .+. +.....+
T Consensus 183 ~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~--~i-~~g------~~p---~~va~sp------------------- 231 (543)
T 1nir_A 183 ISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVA--EI-KIG------IEA---RSVESSK------------------- 231 (543)
T ss_dssp EEEECTTSCEEEEEETTSEEEEEETTSSSCEEEE--EE-ECC------SEE---EEEEECC-------------------
T ss_pred eEEECCCCCEEEEECCCCeEEEEECcCCCCcEEE--EE-ecC------CCc---ceEEeCC-------------------
Confidence 4558999999999999999999999 3322110 00 000 000 0000000
Q ss_pred CCCCCCCCcCCCCCCCceEEE-EeeCCCeEEEEec-C--------C-CCcEEEEEEecCCC-EEEEEcCCCcEEEEeCCC
Q psy3337 81 DKIEDPPILNSIDSKEKNLRF-GFKTFDSVQTVFA-G--------S-ESLQRVVRLSRNGD-LMVTGGTDGHLRLWSFPK 148 (297)
Q Consensus 81 ~~~~~~~~l~~~~~~d~~i~~-~~~~~~~~~~~~~-~--------h-~~~v~~~~~s~~g~-~l~s~~~d~~i~iwd~~~ 148 (297)
.+..+...+..+...+++|.+ |..+++.+..+.. + | ...+.++.++|++. ++++...++.|.+||+.+
T Consensus 232 ~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~ 311 (543)
T 1nir_A 232 FKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKD 311 (543)
T ss_dssp STTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTT
T ss_pred CcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecC
Confidence 000011222334445889999 9999999988862 1 2 23789999999764 567788899999999987
Q ss_pred CeeeE--EeccccCCeeEEEEccCCCEEEEEe-CCCcEEEEEcCCCceeeeeeccC-CCC-ceEEEEeeeeeeeeeCCC-
Q psy3337 149 MKPLL--HIEAHSKEIDDVDFSISGEQIVSIA-KDGKAFVWNSKNGSLSKELKWNT-PDN-IKYLFKRCRYGLVEDSPK- 222 (297)
Q Consensus 149 ~~~~~--~~~~~~~~v~~~~~sp~~~~l~s~~-~d~~v~lwd~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~s~~- 222 (297)
.+.+. .+ .+...+.++.|+|++++|++++ .+++|.+||+.+++++..+.... |.. .... + ++|+
T Consensus 312 ~~~l~~~~i-~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~--------~-~~p~~ 381 (543)
T 1nir_A 312 IDNLTVTSI-GAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGAN--------F-VHPKY 381 (543)
T ss_dssp SSSCEEEEE-ECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEE--------E-EETTT
T ss_pred CCcceeEEe-ccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCcc--------c-CCCCC
Confidence 66443 44 3566788999999999877654 58999999999999888776421 110 0111 1 3677
Q ss_pred CeEEEEeccCcccccCCCCeEEEEeCCC-------CceEEEeccCCC-eEEEEEcCCCCEEEEEe-------cCCCeEEE
Q psy3337 223 RSRLFTLANPLAQNKRGISYVQQWDVDS-------GRLRLAREMKES-LSALAVRDDGRFVAVGT-------MFTGSVFV 287 (297)
Q Consensus 223 ~~~l~~~~~~~~~~g~~d~~i~~wd~~~-------~~~~~~~~~~~~-v~~~~~s~dg~~l~~~~-------~~dg~i~v 287 (297)
+..+++.. ..+++|.+||+.+ ++++..+..+.. +..++++|||++|++++ . +++|.|
T Consensus 382 g~~~~s~~-------~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~-~~~v~v 453 (543)
T 1nir_A 382 GPVWSTSH-------LGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARI-SQSVAV 453 (543)
T ss_dssp EEEEEEEB-------SSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHH-HTCEEE
T ss_pred ccEEEecc-------CCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCccc-CceEEE
Confidence 44444422 2478999999998 899999998865 88999999999999987 4 679999
Q ss_pred EEeCCceec
Q psy3337 288 YIAFSLQMC 296 (297)
Q Consensus 288 wd~~~~~~~ 296 (297)
||+.+++.+
T Consensus 454 ~d~~~~~~~ 462 (543)
T 1nir_A 454 FDLKNLDAK 462 (543)
T ss_dssp EETTCTTSC
T ss_pred EECCCCCCC
Confidence 999988754
No 137
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.82 E-value=3.8e-18 Score=143.57 Aligned_cols=186 Identities=11% Similarity=0.109 Sum_probs=141.0
Q ss_pred CCCCCCCceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCEEEEEcC-CCcEEEEeCCCCee-eEEeccccCCeeEEE
Q psy3337 90 NSIDSKEKNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGT-DGHLRLWSFPKMKP-LLHIEAHSKEIDDVD 166 (297)
Q Consensus 90 ~~~~~~d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~-d~~i~iwd~~~~~~-~~~~~~~~~~v~~~~ 166 (297)
..+.+.++.|.+ +..+++.+..+. .+...+ .++|+|+|+++++++. ++.|.+||+.+++. ...+..+..+..+++
T Consensus 13 ~v~~~~~~~v~~~d~~~~~~~~~~~-~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~ 90 (331)
T 3u4y_A 13 IVVEQHLRRISFFSTDTLEILNQIT-LGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVD 90 (331)
T ss_dssp EEEEGGGTEEEEEETTTCCEEEEEE-CCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEE
T ss_pred EEEecCCCeEEEEeCcccceeeeEE-ccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceE
Confidence 446677889999 999999888877 556666 9999999986665554 88999999998887 777776666666699
Q ss_pred EccCCCEEEEEeCCC---cEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCe-
Q psy3337 167 FSISGEQIVSIAKDG---KAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISY- 242 (297)
Q Consensus 167 ~sp~~~~l~s~~~d~---~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~- 242 (297)
|+|++++|+++..++ .|.+||+.+++.+..+..+. ....++|+|+|++++++.. .++.
T Consensus 91 ~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~-----------~~~~~~~spdg~~l~~~~~-------~~~~~ 152 (331)
T 3u4y_A 91 ITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPY-----------DAVGIAISPNGNGLILIDR-------SSANT 152 (331)
T ss_dssp ECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCT-----------TEEEEEECTTSSCEEEEEE-------TTTTE
T ss_pred ECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCC-----------CccceEECCCCCEEEEEec-------CCCce
Confidence 999999999555553 89999999988877665432 1134789999997777543 3567
Q ss_pred EEEEeCCCCceE-----EEeccCCCeEEEEEcCCCCEEEEEecCCCeEEEEEeCCcee
Q psy3337 243 VQQWDVDSGRLR-----LAREMKESLSALAVRDDGRFVAVGTMFTGSVFVYIAFSLQM 295 (297)
Q Consensus 243 i~~wd~~~~~~~-----~~~~~~~~v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~~~~ 295 (297)
|.+|++.....+ ..+.....+..++|+|||++|++++..++.|.+||+.+++.
T Consensus 153 i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~ 210 (331)
T 3u4y_A 153 VRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPEN 210 (331)
T ss_dssp EEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTS
T ss_pred EEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcc
Confidence 999998763322 22333344899999999997766553389999999988775
No 138
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.82 E-value=1.1e-17 Score=141.86 Aligned_cols=167 Identities=15% Similarity=0.159 Sum_probs=137.1
Q ss_pred CCCceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCeeeEEecc----ccCCeeEEEEc
Q psy3337 94 SKEKNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEA----HSKEIDDVDFS 168 (297)
Q Consensus 94 ~~d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~----~~~~v~~~~~s 168 (297)
..++.|.+ +..+++.+..+. .+...+.+++|+|+|++|++++.++.|.+||+.+++.+..+.. +...+.+++|+
T Consensus 161 ~~~~~i~~~d~~~~~~~~~~~-~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s 239 (353)
T 3vgz_A 161 GKESVIWVVDGGNIKLKTAIQ-NTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLD 239 (353)
T ss_dssp SSSCEEEEEETTTTEEEEEEC-CCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEE
T ss_pred CCCceEEEEcCCCCceEEEec-CCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEEC
Confidence 35778888 999988887775 4566678999999999999999999999999999988777654 45568899999
Q ss_pred cCCCEEEEEeC-CCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEe
Q psy3337 169 ISGEQIVSIAK-DGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWD 247 (297)
Q Consensus 169 p~~~~l~s~~~-d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd 247 (297)
|+++++++++. ++.|.+||+.+++.+..+....+. .++|+|++++++... ..++.|.+||
T Consensus 240 ~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~------------~~~~s~dg~~l~v~~-------~~~~~v~~~d 300 (353)
T 3vgz_A 240 TARQRAFITDSKAAEVLVVDTRNGNILAKVAAPESL------------AVLFNPARNEAYVTH-------RQAGKVSVID 300 (353)
T ss_dssp TTTTEEEEEESSSSEEEEEETTTCCEEEEEECSSCC------------CEEEETTTTEEEEEE-------TTTTEEEEEE
T ss_pred CCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCc------------eEEECCCCCEEEEEE-------CCCCeEEEEE
Confidence 99997776665 599999999999888777654321 267899999777643 3479999999
Q ss_pred CCCCceEEEeccCCCeEEEEEcCCCCEEEEEec
Q psy3337 248 VDSGRLRLAREMKESLSALAVRDDGRFVAVGTM 280 (297)
Q Consensus 248 ~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~ 280 (297)
+.+++.+..+.....+.+++|+|||++|+++..
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~ 333 (353)
T 3vgz_A 301 AKSYKVVKTFDTPTHPNSLALSADGKTLYVSVK 333 (353)
T ss_dssp TTTTEEEEEEECCSEEEEEEECTTSCEEEEEEE
T ss_pred CCCCeEEEEEecCCCCCeEEEcCCCCEEEEEEc
Confidence 999999988887777999999999998877766
No 139
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.80 E-value=4.7e-17 Score=138.00 Aligned_cols=194 Identities=14% Similarity=0.092 Sum_probs=126.9
Q ss_pred CCCCCCceEEE-Eee-CCCe--EEEEec-C-------CCCcEEEEEEecCCCEEEEEcCCCcEEEEeCC-CCeee--EEe
Q psy3337 91 SIDSKEKNLRF-GFK-TFDS--VQTVFA-G-------SESLQRVVRLSRNGDLMVTGGTDGHLRLWSFP-KMKPL--LHI 155 (297)
Q Consensus 91 ~~~~~d~~i~~-~~~-~~~~--~~~~~~-~-------h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~-~~~~~--~~~ 155 (297)
.+...++++.+ ++. ++.. +..+.. + +...+.+++|+|+|+++++...++.|.+|++. +++.. ..+
T Consensus 102 ~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~ 181 (347)
T 3hfq_A 102 SANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVL 181 (347)
T ss_dssp EEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEE
T ss_pred EEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeE
Confidence 34446788888 774 3332 223321 1 12348899999999977777788999999998 55432 222
Q ss_pred ccc-cCCeeEEEEccCCCEEEE-EeCCCcEEEEEcCC--Ccee--eeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEe
Q psy3337 156 EAH-SKEIDDVDFSISGEQIVS-IAKDGKAFVWNSKN--GSLS--KELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTL 229 (297)
Q Consensus 156 ~~~-~~~v~~~~~sp~~~~l~s-~~~d~~v~lwd~~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~ 229 (297)
..+ ...+..++|+|+|++|++ ...++.|.+|++.. ++.. ..+... +.... .......++|+|+|++|++.
T Consensus 182 ~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~-~~~~~---~~~~~~~i~~spdG~~l~v~ 257 (347)
T 3hfq_A 182 TMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTI-PADYT---AHNGAAAIRLSHDGHFLYVS 257 (347)
T ss_dssp ECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESS-CTTCC---SCCEEEEEEECTTSCEEEEE
T ss_pred EcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeec-CCCCC---CCCcceeEEECCCCCEEEEE
Confidence 222 336788999999996665 45688999999874 4432 222211 11000 00123358899999988664
Q ss_pred ccCcccccCCCCeEEEEeCCC-C--ceEEEeccCCC-eEEEEEcCCCCEEEEEecCCCeEEEEE--eCCcee
Q psy3337 230 ANPLAQNKRGISYVQQWDVDS-G--RLRLAREMKES-LSALAVRDDGRFVAVGTMFTGSVFVYI--AFSLQM 295 (297)
Q Consensus 230 ~~~~~~~g~~d~~i~~wd~~~-~--~~~~~~~~~~~-v~~~~~s~dg~~l~~~~~~dg~i~vwd--~~~~~~ 295 (297)
. ..++.|.+|++.. + +.+..+..+.. +..++|+|||++|++++..++.|.+|+ ..+++.
T Consensus 258 ~-------~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l 322 (347)
T 3hfq_A 258 N-------RGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKL 322 (347)
T ss_dssp E-------ETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCE
T ss_pred e-------CCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeE
Confidence 3 2478999999973 2 45555555444 899999999999988886258999994 455654
No 140
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.80 E-value=1.6e-18 Score=161.61 Aligned_cols=180 Identities=13% Similarity=0.040 Sum_probs=133.3
Q ss_pred ceEEE-EeeCCC--eEEEEecCCCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCeeeEEeccccCC------------
Q psy3337 97 KNLRF-GFKTFD--SVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKE------------ 161 (297)
Q Consensus 97 ~~i~~-~~~~~~--~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~------------ 161 (297)
+.|++ ++.++. ....+. .|...+..++|||||++|++++ ++.|++||+.+++.......+...
T Consensus 129 ~~i~~~d~~~~~~~~~~~l~-~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~ 206 (741)
T 2ecf_A 129 GELYLYDLKQEGKAAVRQLT-HGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADE 206 (741)
T ss_dssp TEEEEEESSSCSTTSCCBCC-CSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHH
T ss_pred CcEEEEECCCCCcceEEEcc-cCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEeccCCccceeccccceeeee
Confidence 78888 888772 344555 7888899999999999999887 468999999988766554444332
Q ss_pred ----eeEEEEccCCCEEEEEeCCC---------------------------------cEEEEEcCC-CceeeeeeccCCC
Q psy3337 162 ----IDDVDFSISGEQIVSIAKDG---------------------------------KAFVWNSKN-GSLSKELKWNTPD 203 (297)
Q Consensus 162 ----v~~~~~sp~~~~l~s~~~d~---------------------------------~v~lwd~~~-~~~~~~~~~~~~~ 203 (297)
+.+++|+|||++|++++.|+ .|++||+.+ ++......... .
T Consensus 207 ~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~-~ 285 (741)
T 2ecf_A 207 EMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKE-Q 285 (741)
T ss_dssp HSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSC-S
T ss_pred ccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCCC-c
Confidence 47899999999999987765 788899987 76543322100 0
Q ss_pred CceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCCCceEEEeccCC-----CeEEEEEcCCCCEEEEE
Q psy3337 204 NIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSGRLRLAREMKE-----SLSALAVRDDGRFVAVG 278 (297)
Q Consensus 204 ~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~-----~v~~~~~s~dg~~l~~~ 278 (297)
...+..++| |||+.|++.... .+..+..|++||+.+++....+..+. .+.+++|+|||++++++
T Consensus 286 -------~~~~~~~~~-pDg~~l~~~~~~---~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~ 354 (741)
T 2ecf_A 286 -------DIYLARVNW-RDPQHLSFQRQS---RDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSILWSS 354 (741)
T ss_dssp -------SEEEEEEEE-EETTEEEEEEEE---TTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSCEEEEE
T ss_pred -------ceEEEEEEe-CCCCEEEEEEec---ccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCeEEEEe
Confidence 112345889 999998876420 13456789999999998877765543 24689999999988888
Q ss_pred ecCCCeEEEEEeC
Q psy3337 279 TMFTGSVFVYIAF 291 (297)
Q Consensus 279 ~~~dg~i~vwd~~ 291 (297)
.. ||.++||.+.
T Consensus 355 ~~-~g~~~l~~~~ 366 (741)
T 2ecf_A 355 ER-TGFQHLYRID 366 (741)
T ss_dssp CT-TSSCEEEEEC
T ss_pred cC-CCccEEEEEc
Confidence 88 9988888764
No 141
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.80 E-value=3.9e-17 Score=139.31 Aligned_cols=192 Identities=12% Similarity=0.135 Sum_probs=125.5
Q ss_pred CCCCCCCceEEE-EeeCCCeEEEE----e-cC--------CCCcEEEEEEecCCCEEEE-EcCCCcEEEEeCCCCee---
Q psy3337 90 NSIDSKEKNLRF-GFKTFDSVQTV----F-AG--------SESLQRVVRLSRNGDLMVT-GGTDGHLRLWSFPKMKP--- 151 (297)
Q Consensus 90 ~~~~~~d~~i~~-~~~~~~~~~~~----~-~~--------h~~~v~~~~~s~~g~~l~s-~~~d~~i~iwd~~~~~~--- 151 (297)
..+...++++.+ ++.....+..+ . .+ +...+.+++|+|+|++|++ +..++.|.+|++.....
T Consensus 113 ~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~ 192 (361)
T 3scy_A 113 VTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADN 192 (361)
T ss_dssp EEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTT
T ss_pred EEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCccc
Confidence 334456778888 76543322111 1 01 2334688999999986655 44588999998864331
Q ss_pred ---e-------EEeccccCCeeEEEEccCCCEEEEEe-CCCcEEEEEcCCCcee--eeeeccCCCCceEEEEeeeeeeee
Q psy3337 152 ---L-------LHIEAHSKEIDDVDFSISGEQIVSIA-KDGKAFVWNSKNGSLS--KELKWNTPDNIKYLFKRCRYGLVE 218 (297)
Q Consensus 152 ---~-------~~~~~~~~~v~~~~~sp~~~~l~s~~-~d~~v~lwd~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 218 (297)
+ .....+...+..++|+|+++++++++ .++.|.+||+.++... ..+....... . ....++
T Consensus 193 ~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~-~------~~~~i~ 265 (361)
T 3scy_A 193 KEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNA-Q------GSGDIH 265 (361)
T ss_dssp CCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCC-C------CEEEEE
T ss_pred ccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCC-C------CcccEE
Confidence 1 11223445678999999999887777 6899999999876542 2222111100 0 113588
Q ss_pred eCCCCeEEEEeccCcccccCC-CCeEEEEeCC--CCc--eEEEeccCCCeEEEEEcCCCCEEEEEecCCCeEEEEEe--C
Q psy3337 219 DSPKRSRLFTLANPLAQNKRG-ISYVQQWDVD--SGR--LRLAREMKESLSALAVRDDGRFVAVGTMFTGSVFVYIA--F 291 (297)
Q Consensus 219 ~s~~~~~l~~~~~~~~~~g~~-d~~i~~wd~~--~~~--~~~~~~~~~~v~~~~~s~dg~~l~~~~~~dg~i~vwd~--~ 291 (297)
|+|||++|++... . ++.|.+|++. +++ .+..+.....+..++|+|||++|++++..++.|.+|++ .
T Consensus 266 ~spdg~~l~v~~~-------~~~~~i~v~~~~~~~g~~~~~~~~~~g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~ 338 (361)
T 3scy_A 266 LSPDGKYLYASNR-------LKADGVAIFKVDETNGTLTKVGYQLTGIHPRNFIITPNGKYLLVACRDTNVIQIFERDQA 338 (361)
T ss_dssp ECTTSSEEEEEEC-------SSSCEEEEEEECTTTCCEEEEEEEECSSCCCEEEECTTSCEEEEEETTTTEEEEEEECTT
T ss_pred ECCCCCEEEEECC-------CCCCEEEEEEEcCCCCcEEEeeEecCCCCCceEEECCCCCEEEEEECCCCCEEEEEEECC
Confidence 9999999987543 3 4789999986 344 44445443348899999999999988843789999654 4
Q ss_pred Ccee
Q psy3337 292 SLQM 295 (297)
Q Consensus 292 ~~~~ 295 (297)
+++.
T Consensus 339 ~g~~ 342 (361)
T 3scy_A 339 TGLL 342 (361)
T ss_dssp TCCE
T ss_pred CCcE
Confidence 5553
No 142
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.79 E-value=2.8e-19 Score=156.50 Aligned_cols=155 Identities=15% Similarity=0.151 Sum_probs=118.3
Q ss_pred CCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCC----------eeeEE-----eccccCCeeEEEEccCCCEEE----EE
Q psy3337 117 ESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKM----------KPLLH-----IEAHSKEIDDVDFSISGEQIV----SI 177 (297)
Q Consensus 117 ~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~----------~~~~~-----~~~~~~~v~~~~~sp~~~~l~----s~ 177 (297)
...+..+++++++.++++++.++ +++|+.... ..+.. ...+...|.+++|+|++++|+ ++
T Consensus 36 ~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sg 114 (434)
T 2oit_A 36 KERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSS 114 (434)
T ss_dssp CSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEET
T ss_pred CCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEecc
Confidence 34578999999999999999888 888874210 01111 113566799999999999999 78
Q ss_pred eCCCcEEEEEcCCC--------ce---eeeeeccCCCCceEEEEeeeeeeeeeCCC-CeEEEEeccCcccccCCCCeEEE
Q psy3337 178 AKDGKAFVWNSKNG--------SL---SKELKWNTPDNIKYLFKRCRYGLVEDSPK-RSRLFTLANPLAQNKRGISYVQQ 245 (297)
Q Consensus 178 ~~d~~v~lwd~~~~--------~~---~~~~~~~~~~~~~~~~~~~~~~~~~~s~~-~~~l~~~~~~~~~~g~~d~~i~~ 245 (297)
+.|+.|++||+.++ +. +..+..|. ..+..++|+|+ +.+|++++ .|+.|++
T Consensus 115 s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~----------~~V~~v~~~p~~~~~las~s--------~Dg~v~i 176 (434)
T 2oit_A 115 EYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAG----------GMVIDMKWNPTVPSMVAVCL--------ADGSIAV 176 (434)
T ss_dssp TTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGG----------GSEEEEEECSSCTTEEEEEE--------TTSCEEE
T ss_pred CCCceEEEEEccccccCCcCCcceeeeeeccCCCC----------CceEEEEECCCCCCEEEEEE--------CCCeEEE
Confidence 88999999998654 12 22222232 23456889998 77888854 4999999
Q ss_pred EeCCCCceEEEeccCCC-eEEEEEcCCCCEEEEEecCCCeEEEEEeC
Q psy3337 246 WDVDSGRLRLAREMKES-LSALAVRDDGRFVAVGTMFTGSVFVYIAF 291 (297)
Q Consensus 246 wd~~~~~~~~~~~~~~~-v~~~~~s~dg~~l~~~~~~dg~i~vwd~~ 291 (297)
||++++..+.....|.. |.+++|+|+|++|++|+. ||.|++||++
T Consensus 177 wD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~-dg~v~iwd~~ 222 (434)
T 2oit_A 177 LQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQ-NGTVVQYLPT 222 (434)
T ss_dssp EEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEET-TSCEEEECTT
T ss_pred EEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcC-CCcEEEEccC
Confidence 99999876665555554 999999999999999999 9999999987
No 143
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.79 E-value=2.1e-17 Score=135.97 Aligned_cols=177 Identities=16% Similarity=0.128 Sum_probs=129.1
Q ss_pred CCCCCceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCC-CeeeEEeccc-cCCeeEEEEc
Q psy3337 92 IDSKEKNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPK-MKPLLHIEAH-SKEIDDVDFS 168 (297)
Q Consensus 92 ~~~~d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~-~~~v~~~~~s 168 (297)
.++.|++|++ ++.+++.. .+. .|...|.+++|+|+|++|++++ ++.|++||+.+ ++....+..+ ...+.+++|+
T Consensus 17 ~~~~~~~i~~~d~~~~~~~-~~~-~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s 93 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKMR-VVW-QTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGIS 93 (297)
T ss_dssp -CCCCEEEEEEETTTTEEE-EEE-EESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEEC
T ss_pred CCCcceeEEEEeCCCCcee-eec-cCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEEC
Confidence 4667899999 88887765 444 6888999999999999999986 78999999998 8777666555 3678999999
Q ss_pred cCCCEEEEEe--CCCcEEEEE--cCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEE
Q psy3337 169 ISGEQIVSIA--KDGKAFVWN--SKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQ 244 (297)
Q Consensus 169 p~~~~l~s~~--~d~~v~lwd--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~ 244 (297)
|++++|++++ .++...||. +.++. ...+..+. . ...++|+|+++.|+... ..++.+.
T Consensus 94 pdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~----~-------~~~~~~spdg~~l~~~~-------~~~~~~~ 154 (297)
T 2ojh_A 94 PDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKNL----P-------SYWHGWSPDGKSFTYCG-------IRDQVFD 154 (297)
T ss_dssp TTSSEEEEEECTTTSSCEEEEEETTCCC-CEECCSSS----S-------EEEEEECTTSSEEEEEE-------EETTEEE
T ss_pred CCCCEEEEEEeCCCCcceEEEEECCCCc-eEEeecCC----C-------ccceEECCCCCEEEEEE-------CCCCceE
Confidence 9999999998 334555554 44443 33333222 1 22367999999887432 2378888
Q ss_pred EEeC--CCCceEEEeccCC-CeEEEEEcCCCCEEEEEecCCCeEEEEEeC
Q psy3337 245 QWDV--DSGRLRLAREMKE-SLSALAVRDDGRFVAVGTMFTGSVFVYIAF 291 (297)
Q Consensus 245 ~wd~--~~~~~~~~~~~~~-~v~~~~~s~dg~~l~~~~~~dg~i~vwd~~ 291 (297)
+|++ .+++. ..+..+. .+.+++|+|+|++|++++..++.+.+|++.
T Consensus 155 l~~~~~~~~~~-~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~ 203 (297)
T 2ojh_A 155 IYSMDIDSGVE-TRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVR 203 (297)
T ss_dssp EEEEETTTCCE-EECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred EEEEECCCCcc-eEcccCCCccccceECCCCCEEEEEecCCCCccEEEEC
Confidence 8885 44444 4444444 499999999999887666328899999875
No 144
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.78 E-value=6.3e-19 Score=163.74 Aligned_cols=184 Identities=13% Similarity=0.059 Sum_probs=129.6
Q ss_pred CCceEEE-EeeCCCeEEEEe--cCCCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCeeeEEeccccCCe---------
Q psy3337 95 KEKNLRF-GFKTFDSVQTVF--AGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEI--------- 162 (297)
Q Consensus 95 ~d~~i~~-~~~~~~~~~~~~--~~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v--------- 162 (297)
.++.+++ ++.+++. ..+. .+|...+..++|||||++|++++. +.|++||+.+++.......+...+
T Consensus 89 ~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v 166 (723)
T 1xfd_A 89 YTGYYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWL 166 (723)
T ss_dssp CCSEEEEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHH
T ss_pred ceeeEEEEECCCCce-EeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECccccee
Confidence 3578889 8888876 3333 245556889999999999999876 789999999887766555444333
Q ss_pred ---------eEEEEccCCCEEEEEeCCC----------------------------------cEEEEEcCCCceeeeeec
Q psy3337 163 ---------DDVDFSISGEQIVSIAKDG----------------------------------KAFVWNSKNGSLSKELKW 199 (297)
Q Consensus 163 ---------~~~~~sp~~~~l~s~~~d~----------------------------------~v~lwd~~~~~~~~~~~~ 199 (297)
.+++|+|||++|++++.|+ .|++||+.+++....+..
T Consensus 167 ~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~ 246 (723)
T 1xfd_A 167 YEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMP 246 (723)
T ss_dssp HHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCC
T ss_pred EEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeC
Confidence 7899999999999887543 788999988775555543
Q ss_pred cCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCCCceEEEeccC-CC-e----EEEEEcCCCC
Q psy3337 200 NTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSGRLRLAREMK-ES-L----SALAVRDDGR 273 (297)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~-~~-v----~~~~~s~dg~ 273 (297)
+.... .....+..++|+|||+.+++... .+..+..|++||+.++++...+..+ .. + ..++|+|||+
T Consensus 247 ~~~~~----~~~~~~~~~~~SpDg~~l~~~~~----~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~ 318 (723)
T 1xfd_A 247 PDDPR----MREYYITMVKWATSTKVAVTWLN----RAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGR 318 (723)
T ss_dssp CCCGG----GSSEEEEEEEESSSSEEEEEEEE----TTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSC
T ss_pred CccCC----CccceeEEEEEeCCCeEEEEEEc----CCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCC
Confidence 21000 00112345889999998876543 1345678999999998877665432 22 3 3889999999
Q ss_pred EEEEE--ecCCC------eEEEEE
Q psy3337 274 FVAVG--TMFTG------SVFVYI 289 (297)
Q Consensus 274 ~l~~~--~~~dg------~i~vwd 289 (297)
.|+.. .. ++ .|++||
T Consensus 319 ~l~~~~~~~-~~~~~~~~~l~~~d 341 (723)
T 1xfd_A 319 KFFFIRAIP-QGGRGKFYHITVSS 341 (723)
T ss_dssp SEEEEEEEC-CSSSSCEEEEEEEC
T ss_pred eEEEEEecc-cCCCcceeEEEEEe
Confidence 77754 44 77 577777
No 145
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.78 E-value=1.7e-17 Score=136.48 Aligned_cols=166 Identities=14% Similarity=0.109 Sum_probs=117.7
Q ss_pred eEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCEEE-EEcCCCcEEEEeCC-CCeeeEEeccccCCeeEEEEccCCCEE
Q psy3337 98 NLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDLMV-TGGTDGHLRLWSFP-KMKPLLHIEAHSKEIDDVDFSISGEQI 174 (297)
Q Consensus 98 ~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~-s~~~d~~i~iwd~~-~~~~~~~~~~~~~~v~~~~~sp~~~~l 174 (297)
.|.. +..++. ...+. .+ ..+..++|+|++++|+ ++..++.+.||++. .......+..|...+.+++|+|++++|
T Consensus 111 ~l~~~~~~~~~-~~~~~-~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l 187 (297)
T 2ojh_A 111 AIYLLPSTGGT-PRLMT-KN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWI 187 (297)
T ss_dssp EEEEEETTCCC-CEECC-SS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEE
T ss_pred eEEEEECCCCc-eEEee-cC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEE
Confidence 4444 445544 33443 33 3488999999999877 78889999999863 223445677788899999999999988
Q ss_pred EEEe-CCCcEEEEEcC-CCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccC-------CCCeEEE
Q psy3337 175 VSIA-KDGKAFVWNSK-NGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKR-------GISYVQQ 245 (297)
Q Consensus 175 ~s~~-~d~~v~lwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~-------~d~~i~~ 245 (297)
+.++ .++.+.+|++. .+..+..+..+. ..+..+.|+|++++|++.+.. +. .+..|++
T Consensus 188 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~----------~~~~~~~~s~dg~~l~~~~~~----~~~~~~~~~~~~~l~~ 253 (297)
T 2ojh_A 188 YFNSSRTGQMQIWRVRVDGSSVERITDSA----------YGDWFPHPSPSGDKVVFVSYD----ADVFDHPRDLDVRVQL 253 (297)
T ss_dssp EEEECTTSSCEEEEEETTSSCEEECCCCS----------EEEEEEEECTTSSEEEEEEEE----TTCCSCCSSEEEEEEE
T ss_pred EEEecCCCCccEEEECCCCCCcEEEecCC----------cccCCeEECCCCCEEEEEEcC----CCCCcccccCceEEEE
Confidence 8766 58999999886 445555554332 123347899999999886540 00 1267999
Q ss_pred EeCCCCceEE--EeccCCC-eEEEEEcCCCCEEEEEec
Q psy3337 246 WDVDSGRLRL--AREMKES-LSALAVRDDGRFVAVGTM 280 (297)
Q Consensus 246 wd~~~~~~~~--~~~~~~~-v~~~~~s~dg~~l~~~~~ 280 (297)
||+.+++... .+..+.. +.+++|+|+|++|++++.
T Consensus 254 ~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~ 291 (297)
T 2ojh_A 254 MDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRY 291 (297)
T ss_dssp EETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEE
T ss_pred EecCCCCceeeeccCCCCcccccceECCCCCEEEEEEe
Confidence 9999876543 3335544 899999999999988876
No 146
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.78 E-value=3.4e-18 Score=158.85 Aligned_cols=196 Identities=11% Similarity=0.036 Sum_probs=141.6
Q ss_pred CCCceEEE-EeeCCCeEEEEecCCCC---cEEEEEEecCCCEEEEEcCC---------CcEEEEeCCCCeeeEEe---cc
Q psy3337 94 SKEKNLRF-GFKTFDSVQTVFAGSES---LQRVVRLSRNGDLMVTGGTD---------GHLRLWSFPKMKPLLHI---EA 157 (297)
Q Consensus 94 ~~d~~i~~-~~~~~~~~~~~~~~h~~---~v~~~~~s~~g~~l~s~~~d---------~~i~iwd~~~~~~~~~~---~~ 157 (297)
+.|++|++ +..+++....+. +|.. .|.+++|||||++|++++.+ +.|++||+.+++. ..+ ..
T Consensus 34 ~~dg~i~~~d~~~g~~~~~~~-~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~ 111 (723)
T 1xfd_A 34 EQKGTVRLWNVETNTSTVLIE-GKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLDPPEV 111 (723)
T ss_dssp CSSSCEEEBCGGGCCCEEEEC-TTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-EECCCTTC
T ss_pred eCCCCEEEEECCCCcEEEEec-cccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce-EeccCCcc
Confidence 57889999 999998877775 6654 48999999999999998764 7788999998875 333 34
Q ss_pred ccCCeeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEe-----------eeeeeeeeCCCCeEE
Q psy3337 158 HSKEIDDVDFSISGEQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKR-----------CRYGLVEDSPKRSRL 226 (297)
Q Consensus 158 ~~~~v~~~~~sp~~~~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~s~~~~~l 226 (297)
|...+..++|||||+.|+.++. +.|++||+.+++.......+... ..+.. ..+..++|+|||+.|
T Consensus 112 ~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~---~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~l 187 (723)
T 1xfd_A 112 SNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEG---VIYNGLSDWLYEEEILKTHIAHWWSPDGTRL 187 (723)
T ss_dssp CSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTT---TEEEEECCHHHHHTTSSSSEEEEECTTSSEE
T ss_pred ccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCC---ceECcccceeEEEEeccCcceEEECCCCCEE
Confidence 4555899999999999999876 79999999888765544332211 11100 012458899999999
Q ss_pred EEeccCc------------------------cccc--CCCCeEEEEeCCCCceEEEeccC------CC-eEEEEEcCCCC
Q psy3337 227 FTLANPL------------------------AQNK--RGISYVQQWDVDSGRLRLAREMK------ES-LSALAVRDDGR 273 (297)
Q Consensus 227 ~~~~~~~------------------------~~~g--~~d~~i~~wd~~~~~~~~~~~~~------~~-v~~~~~s~dg~ 273 (297)
++..... ...| ..+..|++||+.+++....+..+ .. +.+++|||||+
T Consensus 188 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~ 267 (723)
T 1xfd_A 188 AYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTK 267 (723)
T ss_dssp EEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSE
T ss_pred EEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCe
Confidence 8876410 0001 11238999999988765555543 33 89999999999
Q ss_pred EEEEEecC---CCeEEEEEeCCcee
Q psy3337 274 FVAVGTMF---TGSVFVYIAFSLQM 295 (297)
Q Consensus 274 ~l~~~~~~---dg~i~vwd~~~~~~ 295 (297)
+|++.... +..|++||+.+++.
T Consensus 268 ~l~~~~~~~~~~~~i~~~d~~~g~~ 292 (723)
T 1xfd_A 268 VAVTWLNRAQNVSILTLCDATTGVC 292 (723)
T ss_dssp EEEEEEETTSCEEEEEEEETTTCCE
T ss_pred EEEEEEcCCCCeEEEEEEeCCCCcc
Confidence 98776530 36799999988764
No 147
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.77 E-value=1.4e-17 Score=151.15 Aligned_cols=151 Identities=18% Similarity=0.175 Sum_probs=112.0
Q ss_pred EEEEEEecCCCE-EEEEcCCCcEEEEeCCCCeeeEEeccccCCeeEEEEccCCCEEEEEeCC----CcEEEEEcCCCcee
Q psy3337 120 QRVVRLSRNGDL-MVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAKD----GKAFVWNSKNGSLS 194 (297)
Q Consensus 120 v~~~~~s~~g~~-l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~d----~~v~lwd~~~~~~~ 194 (297)
+...+|+|+|+. +++.+.++.+.+||+.+++...... +.. .+++|+|||++|++++.+ ..|++||+.+++..
T Consensus 112 ~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~-~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~ 188 (582)
T 3o4h_A 112 MRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELAR-LPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR 188 (582)
T ss_dssp BEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEE-ESS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCE
T ss_pred ceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeec-CCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce
Confidence 446789998853 3333444455699998887654443 333 899999999999988776 78999999887654
Q ss_pred eeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCC--eEEEEeCCCCceEEEeccCCC-eEEEE----
Q psy3337 195 KELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGIS--YVQQWDVDSGRLRLAREMKES-LSALA---- 267 (297)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~--~i~~wd~~~~~~~~~~~~~~~-v~~~~---- 267 (297)
.+..+. . .+..++|+|||+.|++.. .++ .|++||+.+++.. .+..+.. +..++
T Consensus 189 -~l~~~~----~------~~~~~~~SpDG~~l~~~~--------~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~ 248 (582)
T 3o4h_A 189 -VFDSGE----G------SFSSASISPGMKVTAGLE--------TAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAI 248 (582)
T ss_dssp -EECCSS----C------EEEEEEECTTSCEEEEEE--------CSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEE
T ss_pred -EeecCC----C------ccccceECCCCCEEEEcc--------CCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhccc
Confidence 444332 1 123478999999999533 366 8999999998887 6666654 66666
Q ss_pred ----EcCCCCEEEEEecCCCeEEEEEeCCceec
Q psy3337 268 ----VRDDGRFVAVGTMFTGSVFVYIAFSLQMC 296 (297)
Q Consensus 268 ----~s~dg~~l~~~~~~dg~i~vwd~~~~~~~ 296 (297)
|+|||.++++++. ++.+++|++ ++.+
T Consensus 249 ~~~~~spdg~~~~~~~~-~g~~~l~~~--g~~~ 278 (582)
T 3o4h_A 249 TWLGYLPDGRLAVVARR-EGRSAVFID--GERV 278 (582)
T ss_dssp EEEEECTTSCEEEEEEE-TTEEEEEET--TEEE
T ss_pred cceeEcCCCcEEEEEEc-CCcEEEEEE--CCee
Confidence 9999988899999 999999998 5543
No 148
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.77 E-value=3.3e-17 Score=138.08 Aligned_cols=183 Identities=9% Similarity=0.048 Sum_probs=129.5
Q ss_pred CCCCCCCceEEE-Eee-CCCeEEEEecCCCCcEEEEEEecCCCEEEEEcCC-CcEEEEeCC--CCe--eeEEeccccCCe
Q psy3337 90 NSIDSKEKNLRF-GFK-TFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTD-GHLRLWSFP--KMK--PLLHIEAHSKEI 162 (297)
Q Consensus 90 ~~~~~~d~~i~~-~~~-~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d-~~i~iwd~~--~~~--~~~~~~~~~~~v 162 (297)
..+++.|+.|++ ++. +++........|...+.+++|+|+|++|++++.+ +.|.+|++. +++ .+..+..+. .+
T Consensus 8 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~ 86 (343)
T 1ri6_A 8 YIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SL 86 (343)
T ss_dssp EEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CC
T ss_pred EEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CC
Confidence 334567889999 774 3432211112577778899999999988888876 899999987 444 344555444 78
Q ss_pred eEEEEccCCCEEEEEeC-CCcEEEEEcCCC---ceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccC
Q psy3337 163 DDVDFSISGEQIVSIAK-DGKAFVWNSKNG---SLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKR 238 (297)
Q Consensus 163 ~~~~~sp~~~~l~s~~~-d~~v~lwd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~ 238 (297)
..++|+|++++|++++. ++.|.+||+..+ ..+..+..+. ....++|+|++++++++..
T Consensus 87 ~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~-----------~~~~~~~s~dg~~l~~~~~------- 148 (343)
T 1ri6_A 87 THISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLD-----------GCHSANISPDNRTLWVPAL------- 148 (343)
T ss_dssp SEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCT-----------TBCCCEECTTSSEEEEEEG-------
T ss_pred cEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCCC-----------CceEEEECCCCCEEEEecC-------
Confidence 99999999998877665 889999999433 3333332221 1234779999998887641
Q ss_pred CCCeEEEEeCCC-CceEE----Eecc--CCCeEEEEEcCCCCEEEEEe-cCCCeEEEEEeCC
Q psy3337 239 GISYVQQWDVDS-GRLRL----AREM--KESLSALAVRDDGRFVAVGT-MFTGSVFVYIAFS 292 (297)
Q Consensus 239 ~d~~i~~wd~~~-~~~~~----~~~~--~~~v~~~~~s~dg~~l~~~~-~~dg~i~vwd~~~ 292 (297)
.++.|.+||+.+ ++... .+.. ...+..++|+|+|++|++++ . ++.|.+|++..
T Consensus 149 ~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~-~~~i~~~~~~~ 209 (343)
T 1ri6_A 149 KQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNEL-NSSVDVWELKD 209 (343)
T ss_dssp GGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETT-TTEEEEEESSC
T ss_pred CCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCC-CCEEEEEEecC
Confidence 378999999987 65432 2222 23488999999999876665 6 89999999953
No 149
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.76 E-value=4.9e-17 Score=150.73 Aligned_cols=186 Identities=10% Similarity=0.094 Sum_probs=132.1
Q ss_pred CCceEEE-EeeC-----CCeEEEEecCCCCc--------------EEEEEEecCCCEEEEEc------------------
Q psy3337 95 KEKNLRF-GFKT-----FDSVQTVFAGSESL--------------QRVVRLSRNGDLMVTGG------------------ 136 (297)
Q Consensus 95 ~d~~i~~-~~~~-----~~~~~~~~~~h~~~--------------v~~~~~s~~g~~l~s~~------------------ 136 (297)
.|+.|++ ++.+ ++...... .+... +.++.|||||++|++++
T Consensus 139 ~~~~i~v~~~~~~~~~~g~~~~~~~-~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~ 217 (706)
T 2z3z_A 139 RNHNLYIARGGKLGEGMSRAIAVTI-DGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLE 217 (706)
T ss_dssp ETTEEEEEECBCTTSCCCCCEESCS-CCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSS
T ss_pred ECCeEEEEecCcccccCCCcEEecc-CCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCC
Confidence 5688999 8888 77665544 33332 47899999999999987
Q ss_pred ---------------CCCcEEEEeCCCCeeeEEec--cccCCeeEEEEccCCCEEEEEeCCC-----cEEEEEcCCCcee
Q psy3337 137 ---------------TDGHLRLWSFPKMKPLLHIE--AHSKEIDDVDFSISGEQIVSIAKDG-----KAFVWNSKNGSLS 194 (297)
Q Consensus 137 ---------------~d~~i~iwd~~~~~~~~~~~--~~~~~v~~~~~sp~~~~l~s~~~d~-----~v~lwd~~~~~~~ 194 (297)
.+..|++||+.+++...... .|...+.+++|+|||+.|++++.++ .|++||+.+++..
T Consensus 218 ~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~ 297 (706)
T 2z3z_A 218 AESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFV 297 (706)
T ss_dssp CEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEE
T ss_pred CceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCcee
Confidence 44679999999887654432 4667899999999999999887765 8999999988444
Q ss_pred eeeeccCCCCceEEEEeeeeeeeeeCC--CCeEEEEeccCcccccCCCCeEEEEeCC-CCceEEEeccCCC-eEE-EEEc
Q psy3337 195 KELKWNTPDNIKYLFKRCRYGLVEDSP--KRSRLFTLANPLAQNKRGISYVQQWDVD-SGRLRLAREMKES-LSA-LAVR 269 (297)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~s~--~~~~l~~~~~~~~~~g~~d~~i~~wd~~-~~~~~~~~~~~~~-v~~-~~~s 269 (297)
..+...... ... .....+.|+| +|+++++.. .++.+++|++. ++..+..+..+.. +.. ++|+
T Consensus 298 ~~~~~~~~~--~~~---~~~~~~~~sp~~dg~~l~~~~--------~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~s 364 (706)
T 2z3z_A 298 RTLFVETDK--HYV---EPLHPLTFLPGSNNQFIWQSR--------RDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFD 364 (706)
T ss_dssp EEEEEEECS--SCC---CCCSCCEECTTCSSEEEEEEC--------TTSSCEEEEEETTSCEEEECCCSSSCEEEEEEEC
T ss_pred eEEEEccCC--CeE---CccCCceeecCCCCEEEEEEc--------cCCccEEEEEECCCCEEEecCCCCeEEEeeeEEc
Confidence 333211100 000 0113467999 999887744 47888888776 5667777766655 766 8999
Q ss_pred CCCCEEEEEecCCC----eEEEEEeCCce
Q psy3337 270 DDGRFVAVGTMFTG----SVFVYIAFSLQ 294 (297)
Q Consensus 270 ~dg~~l~~~~~~dg----~i~vwd~~~~~ 294 (297)
|||+.|+.++..++ .|+.||+.+++
T Consensus 365 pdg~~l~~~~~~~~~~~~~l~~~d~~~~~ 393 (706)
T 2z3z_A 365 PKGTRLYFESTEASPLERHFYCIDIKGGK 393 (706)
T ss_dssp TTSSEEEEEESSSCTTCBEEEEEETTCCC
T ss_pred CCCCEEEEEecCCCCceEEEEEEEcCCCC
Confidence 99998876665244 67777876654
No 150
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.75 E-value=1.1e-16 Score=148.34 Aligned_cols=184 Identities=11% Similarity=0.090 Sum_probs=131.4
Q ss_pred CCceEEE-EeeCCCeEEEEe-cCCCCcEEEEEEecCCCEEEEEcCCC-----cEEEEeCCCCeeeEEec-c-ccC---Ce
Q psy3337 95 KEKNLRF-GFKTFDSVQTVF-AGSESLQRVVRLSRNGDLMVTGGTDG-----HLRLWSFPKMKPLLHIE-A-HSK---EI 162 (297)
Q Consensus 95 ~d~~i~~-~~~~~~~~~~~~-~~h~~~v~~~~~s~~g~~l~s~~~d~-----~i~iwd~~~~~~~~~~~-~-~~~---~v 162 (297)
.+..|++ ++.+++...... ..|...+.+++|+|||++|++++.++ .|++||+.+++....+. . +.. .+
T Consensus 233 ~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~ 312 (706)
T 2z3z_A 233 HHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPL 312 (706)
T ss_dssp CEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCC
T ss_pred CeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECcc
Confidence 4567888 888877554443 25777899999999999999887775 89999999884333332 2 222 24
Q ss_pred eEEEEcc--CCCEEEEEeCCCcEEEEEcC-CCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCC
Q psy3337 163 DDVDFSI--SGEQIVSIAKDGKAFVWNSK-NGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRG 239 (297)
Q Consensus 163 ~~~~~sp--~~~~l~s~~~d~~v~lwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~ 239 (297)
.++.|+| +|+++++++.|+.++||++. ++..+..+..+... . ...++|+|+++.|+..+. ...
T Consensus 313 ~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~----v-----~~~~~~spdg~~l~~~~~-----~~~ 378 (706)
T 2z3z_A 313 HPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWE----V-----TNFAGFDPKGTRLYFEST-----EAS 378 (706)
T ss_dssp SCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSC----E-----EEEEEECTTSSEEEEEES-----SSC
T ss_pred CCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeE----E-----EeeeEEcCCCCEEEEEec-----CCC
Confidence 6789999 99999999999999999876 56666666443211 1 112678999998877654 111
Q ss_pred --CCeEEEEeCCCCceEEEeccCCCeEEEEEcCCCCEEEEEecCC----CeEEEEEeCCce
Q psy3337 240 --ISYVQQWDVDSGRLRLAREMKESLSALAVRDDGRFVAVGTMFT----GSVFVYIAFSLQ 294 (297)
Q Consensus 240 --d~~i~~wd~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~d----g~i~vwd~~~~~ 294 (297)
...|+.||+.+++ ...+.....+.+++|+|||++|+.... + +.|++||+.+++
T Consensus 379 ~~~~~l~~~d~~~~~-~~~l~~~~~~~~~~~spdg~~l~~~~~-~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 379 PLERHFYCIDIKGGK-TKDLTPESGMHRTQLSPDGSAIIDIFQ-SPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp TTCBEEEEEETTCCC-CEESCCSSSEEEEEECTTSSEEEEEEE-CSSCSCEEEEEESSSCE
T ss_pred CceEEEEEEEcCCCC-ceeccCCCceEEEEECCCCCEEEEEec-CCCCCcEEEEEECCCCe
Confidence 2378888888776 344444445999999999999887654 3 569999998775
No 151
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.75 E-value=1.7e-16 Score=133.29 Aligned_cols=192 Identities=10% Similarity=0.074 Sum_probs=130.7
Q ss_pred CCCCCCceEEE-EeeCCCeEEEEecCCCC-cEEEEEEecCCCEE-EEEcCCCcEEEEeCCCCeeeEEecc-c----cCCe
Q psy3337 91 SIDSKEKNLRF-GFKTFDSVQTVFAGSES-LQRVVRLSRNGDLM-VTGGTDGHLRLWSFPKMKPLLHIEA-H----SKEI 162 (297)
Q Consensus 91 ~~~~~d~~i~~-~~~~~~~~~~~~~~h~~-~v~~~~~s~~g~~l-~s~~~d~~i~iwd~~~~~~~~~~~~-~----~~~v 162 (297)
.+++.+++|++ |..+++.+..+..++.. .+..++|+|+|+++ +++..++.|.+||+.+++.+..+.. + ...+
T Consensus 5 v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~ 84 (337)
T 1pby_B 5 LAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSL 84 (337)
T ss_dssp EEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECT
T ss_pred EEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccc
Confidence 35667889999 99999888877633322 36789999999765 5666788999999999888776653 1 2267
Q ss_pred eEEEEccCCCEEEEEe------------CCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEec
Q psy3337 163 DDVDFSISGEQIVSIA------------KDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLA 230 (297)
Q Consensus 163 ~~~~~sp~~~~l~s~~------------~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~ 230 (297)
.+++|+|++++|+++. .++.|.+||+.+++.+..+.... ....++|+|++++|++..
T Consensus 85 ~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~-----------~~~~~~~s~dg~~l~~~~ 153 (337)
T 1pby_B 85 FGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPR-----------QITMLAWARDGSKLYGLG 153 (337)
T ss_dssp TCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCS-----------SCCCEEECTTSSCEEEES
T ss_pred cceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCC-----------CcceeEECCCCCEEEEeC
Confidence 8999999999998886 57999999999887776664321 112355677777666542
Q ss_pred cC--------------------------------cccccCCCC-----------------------eEEEEeCCCCceEE
Q psy3337 231 NP--------------------------------LAQNKRGIS-----------------------YVQQWDVDSGRLRL 255 (297)
Q Consensus 231 ~~--------------------------------~~~~g~~d~-----------------------~i~~wd~~~~~~~~ 255 (297)
.. +.+.+..++ .|.+||+.+++...
T Consensus 154 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~ 233 (337)
T 1pby_B 154 RDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAM 233 (337)
T ss_dssp SSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEE
T ss_pred CeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceE
Confidence 10 000000011 24555555554431
Q ss_pred -EeccCC-CeEEEEEcCCCCEEEEEecCCCeEEEEEeCCceec
Q psy3337 256 -AREMKE-SLSALAVRDDGRFVAVGTMFTGSVFVYIAFSLQMC 296 (297)
Q Consensus 256 -~~~~~~-~v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~~~~~ 296 (297)
.+..+. .+.+++|+|||++|+++ ++.|.+||+.+++.+
T Consensus 234 ~~~~~~~~~~~~~~~s~dg~~l~~~---~~~v~~~d~~~~~~~ 273 (337)
T 1pby_B 234 REVRIMDVFYFSTAVNPAKTRAFGA---YNVLESFDLEKNASI 273 (337)
T ss_dssp EEEEECSSCEEEEEECTTSSEEEEE---ESEEEEEETTTTEEE
T ss_pred eecCCCCCceeeEEECCCCCEEEEe---CCeEEEEECCCCcCc
Confidence 111222 26789999999999887 579999999887754
No 152
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.75 E-value=1.8e-15 Score=129.33 Aligned_cols=193 Identities=9% Similarity=-0.014 Sum_probs=127.8
Q ss_pred CCceEEE-Eee-CCCeEEEEe---cCCCCcEEEEEEecCCCEEEEEc-CCCcEEEEeCC-CCeee--EEec--cccCCee
Q psy3337 95 KEKNLRF-GFK-TFDSVQTVF---AGSESLQRVVRLSRNGDLMVTGG-TDGHLRLWSFP-KMKPL--LHIE--AHSKEID 163 (297)
Q Consensus 95 ~d~~i~~-~~~-~~~~~~~~~---~~h~~~v~~~~~s~~g~~l~s~~-~d~~i~iwd~~-~~~~~--~~~~--~~~~~v~ 163 (297)
.++++.+ ++. .++....+. ..+...+.+++|+|||++|+++. .++.|++||+. +++.. ..+. .|...+.
T Consensus 117 ~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~ 196 (365)
T 1jof_A 117 FAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPR 196 (365)
T ss_dssp SCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEE
T ss_pred CCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCC
Confidence 5778888 776 466544433 13556789999999999887765 46799999998 67642 3333 2456789
Q ss_pred EEEEccCCCEEEEEeC-CCcEEEEEcC--CCceee---eeeccCCCCc-eEEE---Eeeeeeeee-eCCCCeEEEEeccC
Q psy3337 164 DVDFSISGEQIVSIAK-DGKAFVWNSK--NGSLSK---ELKWNTPDNI-KYLF---KRCRYGLVE-DSPKRSRLFTLANP 232 (297)
Q Consensus 164 ~~~~sp~~~~l~s~~~-d~~v~lwd~~--~~~~~~---~~~~~~~~~~-~~~~---~~~~~~~~~-~s~~~~~l~~~~~~ 232 (297)
.++|+|+|++|++++. ++.|.+|++. +++... .+... |... ...- .......++ |+|||++|++...
T Consensus 197 ~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~- 274 (365)
T 1jof_A 197 WVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLI-PPGIPDRDPETGKGLYRADVCALTFSGKYMFASSR- 274 (365)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESS-CTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEE-
T ss_pred EeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcC-CCCcCCcccccccccccccEEEECCCCCEEEEECC-
Confidence 9999999999887764 7899999875 455421 22111 1100 0000 000133588 9999999887543
Q ss_pred cccccCC---CCeEEEEeCC-CCceEE---EeccCC-CeEEEEEcC---CCCEEEEEecCCCeEEEEEeCCc
Q psy3337 233 LAQNKRG---ISYVQQWDVD-SGRLRL---AREMKE-SLSALAVRD---DGRFVAVGTMFTGSVFVYIAFSL 293 (297)
Q Consensus 233 ~~~~g~~---d~~i~~wd~~-~~~~~~---~~~~~~-~v~~~~~s~---dg~~l~~~~~~dg~i~vwd~~~~ 293 (297)
+.. .+.|.+|++. +++... ....+. .+..++|+| ||++|++++..++.|.+|++...
T Consensus 275 ----~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 275 ----ANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp ----ESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred ----CCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 211 1389999996 566543 233333 377899999 89999998862489999998654
No 153
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.75 E-value=1.6e-16 Score=134.19 Aligned_cols=185 Identities=11% Similarity=0.082 Sum_probs=134.5
Q ss_pred CCCCCCCceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCEE-EEEcCCCcEEEEeCCCCeeeEEeccc------cCC
Q psy3337 90 NSIDSKEKNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDLM-VTGGTDGHLRLWSFPKMKPLLHIEAH------SKE 161 (297)
Q Consensus 90 ~~~~~~d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l-~s~~~d~~i~iwd~~~~~~~~~~~~~------~~~ 161 (297)
..+++.+++|++ |..+++.+..+..+....+..++|+|+|+++ +++..++.|.+||+.+++.+..+..+ ...
T Consensus 14 ~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~ 93 (349)
T 1jmx_B 14 MIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRS 93 (349)
T ss_dssp EEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEEC
T ss_pred EEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEccccccccccc
Confidence 446677899999 9999988888762322246799999999865 56667899999999999887766532 233
Q ss_pred eeEEEEccCCCEEEEEeCC------------CcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEe
Q psy3337 162 IDDVDFSISGEQIVSIAKD------------GKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTL 229 (297)
Q Consensus 162 v~~~~~sp~~~~l~s~~~d------------~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~ 229 (297)
+..++|+|++++|++++.+ +.|.+||+.+++....+.... ....+..++|+|+++ +++.
T Consensus 94 ~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~--------~~~~~~~~~~s~dg~-l~~~ 164 (349)
T 1jmx_B 94 MYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP--------MPRQVYLMRAADDGS-LYVA 164 (349)
T ss_dssp SSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE--------CCSSCCCEEECTTSC-EEEE
T ss_pred ccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc--------CCCcccceeECCCCc-EEEc
Confidence 7899999999999988865 899999998754433221100 001233477899999 6553
Q ss_pred ccCcccccCCCCeEEEEeCCCCceEEEeccCC------------------------------------------------
Q psy3337 230 ANPLAQNKRGISYVQQWDVDSGRLRLAREMKE------------------------------------------------ 261 (297)
Q Consensus 230 ~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~------------------------------------------------ 261 (297)
++.|.+||+.+++.+..+..+.
T Consensus 165 ----------~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 234 (349)
T 1jmx_B 165 ----------GPDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYG 234 (349)
T ss_dssp ----------SSSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEE
T ss_pred ----------cCcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCcccccccee
Confidence 2349999999888776654331
Q ss_pred ---------------------CeEEEEEcC-CCCEEEEEecCCCeEEEEEeCCceec
Q psy3337 262 ---------------------SLSALAVRD-DGRFVAVGTMFTGSVFVYIAFSLQMC 296 (297)
Q Consensus 262 ---------------------~v~~~~~s~-dg~~l~~~~~~dg~i~vwd~~~~~~~ 296 (297)
.+.+++|+| ||++|+++ ++.|.+||+.+++.+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~---~~~v~~~d~~~~~~~ 288 (349)
T 1jmx_B 235 YLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV---LNRLAKYDLKQRKLI 288 (349)
T ss_dssp EEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE---ESEEEEEETTTTEEE
T ss_pred EEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE---cCeEEEEECccCeEE
Confidence 245677889 99999888 569999999988754
No 154
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.74 E-value=3.9e-17 Score=152.18 Aligned_cols=146 Identities=13% Similarity=0.094 Sum_probs=114.4
Q ss_pred CCcEEEEEEecCCCEEEEEcC-CC-----cEEEEeCCCCeeeEEeccccC------------------------CeeEEE
Q psy3337 117 ESLQRVVRLSRNGDLMVTGGT-DG-----HLRLWSFPKMKPLLHIEAHSK------------------------EIDDVD 166 (297)
Q Consensus 117 ~~~v~~~~~s~~g~~l~s~~~-d~-----~i~iwd~~~~~~~~~~~~~~~------------------------~v~~~~ 166 (297)
...+.+++|||||++|++++. |+ .|++||+.+++....+..+.. .|.+++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 445889999999999999988 88 899999999887766655433 378999
Q ss_pred EccCCCEEEEEeCCCcEEEEEcCCCc--eeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEE
Q psy3337 167 FSISGEQIVSIAKDGKAFVWNSKNGS--LSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQ 244 (297)
Q Consensus 167 ~sp~~~~l~s~~~d~~v~lwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~ 244 (297)
|+|||++|++++. +.|++||+.++. .+..+..+. ..+..++|+|||++|+++. ++.|+
T Consensus 116 ~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~----------~~~~~~~~SPDG~~la~~~---------~~~i~ 175 (741)
T 2ecf_A 116 WSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGE----------GFATDAKLSPKGGFVSFIR---------GRNLW 175 (741)
T ss_dssp ECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSS----------SCEEEEEECTTSSEEEEEE---------TTEEE
T ss_pred ECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCC----------cccccccCCCCCCEEEEEe---------CCcEE
Confidence 9999999999886 899999998872 333343332 1233478999999998865 45899
Q ss_pred EEeCCCCceEEEeccCCC-----------------eEEEEEcCCCCEEEEEecCCC
Q psy3337 245 QWDVDSGRLRLAREMKES-----------------LSALAVRDDGRFVAVGTMFTG 283 (297)
Q Consensus 245 ~wd~~~~~~~~~~~~~~~-----------------v~~~~~s~dg~~l~~~~~~dg 283 (297)
+||+.+++.......+.. +.+++|||||++|++++. |+
T Consensus 176 ~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~-d~ 230 (741)
T 2ecf_A 176 VIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARI-DE 230 (741)
T ss_dssp EEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEE-EC
T ss_pred EEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEE-cC
Confidence 999998887765544432 378999999999999887 65
No 155
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.73 E-value=5.5e-17 Score=156.73 Aligned_cols=175 Identities=13% Similarity=0.159 Sum_probs=136.3
Q ss_pred CCceEEE-EeeCCCeEEEEecC-----------CCCcEEEEEEe-cCCCEEEEEcCCCcEEEEeCCCCeeeEEeccccC-
Q psy3337 95 KEKNLRF-GFKTFDSVQTVFAG-----------SESLQRVVRLS-RNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSK- 160 (297)
Q Consensus 95 ~d~~i~~-~~~~~~~~~~~~~~-----------h~~~v~~~~~s-~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~- 160 (297)
.++.|++ +... ..+..+. + |...+.+++|+ |||++|++++ ++.|++|++..++.. .+..|..
T Consensus 263 ~~~~i~~~d~~~-~~l~~l~-~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~-~~~~~~~~ 338 (1045)
T 1k32_A 263 KGGSIYIFNPDT-EKIEKIE-IGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVL-KVPEPLRI 338 (1045)
T ss_dssp ETTEEEEECTTT-CCEEECC-CCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEE-ECSCCSCE
T ss_pred eCCEEEEecCCc-eEeeeec-cCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceE-EccCCCcc
Confidence 3677887 6633 3344443 3 34468899999 9999999887 789999999877644 4666777
Q ss_pred CeeEEEEccCCCEEEEEeCCCcEE-EEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCC
Q psy3337 161 EIDDVDFSISGEQIVSIAKDGKAF-VWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRG 239 (297)
Q Consensus 161 ~v~~~~~sp~~~~l~s~~~d~~v~-lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~ 239 (297)
.+..++|+ +++.|++++.+..+. +||+.+++.. .+..+. ..+..++|+|||++|++...
T Consensus 339 ~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~-~l~~~~----------~~~~~~~~SpDG~~la~~~~-------- 398 (1045)
T 1k32_A 339 RYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAE-KFEENL----------GNVFAMGVDRNGKFAVVAND-------- 398 (1045)
T ss_dssp EEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEE-ECCCCC----------CSEEEEEECTTSSEEEEEET--------
T ss_pred eEEeeeEc-CCCeEEEEECCCceEEEEECCCCCce-EecCCc----------cceeeeEECCCCCEEEEECC--------
Confidence 89999999 999999998888888 8998776543 332321 12335789999999998655
Q ss_pred CCeEEEEeCCCCceEEEeccCCC-eEEEEEcCCCCEEEEEecCCC----------eEEEEEeCCce
Q psy3337 240 ISYVQQWDVDSGRLRLAREMKES-LSALAVRDDGRFVAVGTMFTG----------SVFVYIAFSLQ 294 (297)
Q Consensus 240 d~~i~~wd~~~~~~~~~~~~~~~-v~~~~~s~dg~~l~~~~~~dg----------~i~vwd~~~~~ 294 (297)
++.|++||+.+++....+..+.. +.+++|||||++|++++. ++ .|++||+.+++
T Consensus 399 ~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~-~~~~~~~~~~~~~i~l~d~~~g~ 463 (1045)
T 1k32_A 399 RFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFP-LKHGETDGYVMQAIHVYDMEGRK 463 (1045)
T ss_dssp TSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEE-ECSSTTCSCCEEEEEEEETTTTE
T ss_pred CCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEec-CccccccCCCCCeEEEEECCCCc
Confidence 89999999999998888766655 899999999999988876 54 89999998876
No 156
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.73 E-value=1.8e-16 Score=153.13 Aligned_cols=181 Identities=8% Similarity=-0.049 Sum_probs=138.5
Q ss_pred CceEEE-EeeCCCeEEEEecCCCC-cEEEEEEecCCCEEEEEcCCCcEE-EEeCCCCeeeEEeccccCCeeEEEEccCCC
Q psy3337 96 EKNLRF-GFKTFDSVQTVFAGSES-LQRVVRLSRNGDLMVTGGTDGHLR-LWSFPKMKPLLHIEAHSKEIDDVDFSISGE 172 (297)
Q Consensus 96 d~~i~~-~~~~~~~~~~~~~~h~~-~v~~~~~s~~g~~l~s~~~d~~i~-iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~ 172 (297)
++.+++ +..++... .+. .|.. .+..++|+ ||+.|++++.+..+. +||+.+++.. .+..|...+..++|+|||+
T Consensus 316 ~~~i~~~~~~~~~~~-~~~-~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~-~l~~~~~~~~~~~~SpDG~ 391 (1045)
T 1k32_A 316 RGQAFIQDVSGTYVL-KVP-EPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAE-KFEENLGNVFAMGVDRNGK 391 (1045)
T ss_dssp TTEEEEECTTSSBEE-ECS-CCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEE-ECCCCCCSEEEEEECTTSS
T ss_pred cCEEEEEcCCCCceE-Ecc-CCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCce-EecCCccceeeeEECCCCC
Confidence 567777 66666543 344 6777 89999999 999999988888888 9998876654 4447888999999999999
Q ss_pred EEEEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCc--ccccCCCCeEEEEeCCC
Q psy3337 173 QIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPL--AQNKRGISYVQQWDVDS 250 (297)
Q Consensus 173 ~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~--~~~g~~d~~i~~wd~~~ 250 (297)
+|++++.++.|++||+.+++....+..|.. .+..++|+|||++|++.+... -..+..++.|++||+.+
T Consensus 392 ~la~~~~~~~v~~~d~~tg~~~~~~~~~~~----------~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~ 461 (1045)
T 1k32_A 392 FAVVANDRFEIMTVDLETGKPTVIERSREA----------MITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEG 461 (1045)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEECSSS----------CCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTT
T ss_pred EEEEECCCCeEEEEECCCCceEEeccCCCC----------CccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCC
Confidence 999999999999999999887666544431 123477999999998865400 00002246999999998
Q ss_pred CceEEEeccCCC-eEEEEEcCCCCEEEEEecCCCeEEEEEeCC
Q psy3337 251 GRLRLAREMKES-LSALAVRDDGRFVAVGTMFTGSVFVYIAFS 292 (297)
Q Consensus 251 ~~~~~~~~~~~~-v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~ 292 (297)
++ ...+..+.. +.+++|+|||++|++++. ++...+|+...
T Consensus 462 g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~-~~~~~~~~~~~ 502 (1045)
T 1k32_A 462 RK-IFAATTENSHDYAPAFDADSKNLYYLSY-RSLDPSPDRVV 502 (1045)
T ss_dssp TE-EEECSCSSSBEEEEEECTTSCEEEEEES-CCCCCEECSSS
T ss_pred Cc-EEEeeCCCcccCCceEcCCCCEEEEEec-ccCCcCcchhc
Confidence 87 555555554 889999999999999998 88888887644
No 157
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.71 E-value=2.5e-15 Score=127.32 Aligned_cols=181 Identities=14% Similarity=0.147 Sum_probs=122.4
Q ss_pred CCceEEE-EeeCCCe--EEEEecCCCCcEEEEEEecCCCEEEEEc-CCCcEEEEeCC-CCe--eeEEecc---------c
Q psy3337 95 KEKNLRF-GFKTFDS--VQTVFAGSESLQRVVRLSRNGDLMVTGG-TDGHLRLWSFP-KMK--PLLHIEA---------H 158 (297)
Q Consensus 95 ~d~~i~~-~~~~~~~--~~~~~~~h~~~v~~~~~s~~g~~l~s~~-~d~~i~iwd~~-~~~--~~~~~~~---------~ 158 (297)
.++.|++ ++.+++. +..+. .+...+..++|+|+|++|++++ .++.|.+|++. ++. .+..+.. +
T Consensus 61 ~~~~v~~~~~~~g~~~~~~~~~-~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~ 139 (347)
T 3hfq_A 61 DEGGIAAWQIDGQTAHKLNTVV-APGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQD 139 (347)
T ss_dssp TEEEEEEEEEETTEEEEEEEEE-EESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCS
T ss_pred CCceEEEEEecCCcEEEeeeee-cCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCcccc
Confidence 4678888 8876653 33333 4666778999999999888877 78899999996 332 3333321 1
Q ss_pred cCCeeEEEEccCCCEEEEEeCCCcEEEEEcC-CCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCccccc
Q psy3337 159 SKEIDDVDFSISGEQIVSIAKDGKAFVWNSK-NGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNK 237 (297)
Q Consensus 159 ~~~v~~~~~sp~~~~l~s~~~d~~v~lwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g 237 (297)
...+.+++|+|+++++++...++.|.+||+. +++.........+.+ .....++|+|||++++++.
T Consensus 140 ~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g-------~~p~~~~~spdg~~l~v~~------- 205 (347)
T 3hfq_A 140 GSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAG-------FGPRHLVFSPDGQYAFLAG------- 205 (347)
T ss_dssp SCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTT-------CCEEEEEECTTSSEEEEEE-------
T ss_pred CCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCC-------CCCceEEECCCCCEEEEEe-------
Confidence 2248899999999966666678899999998 454322211111111 0122478999999877753
Q ss_pred CCCCeEEEEeCCC--Cce--EEEeccC-------CCeEEEEEcCCCCEEE-EEecCCCeEEEEEeC
Q psy3337 238 RGISYVQQWDVDS--GRL--RLAREMK-------ESLSALAVRDDGRFVA-VGTMFTGSVFVYIAF 291 (297)
Q Consensus 238 ~~d~~i~~wd~~~--~~~--~~~~~~~-------~~v~~~~~s~dg~~l~-~~~~~dg~i~vwd~~ 291 (297)
..++.|.+|++.. ++. +..+... ..+..++|+|||++|+ +... ++.|.+|++.
T Consensus 206 ~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~-~~~v~v~~~~ 270 (347)
T 3hfq_A 206 ELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRG-YNTLAVFAVT 270 (347)
T ss_dssp TTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEET-TTEEEEEEEC
T ss_pred CCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCC-CCEEEEEEEC
Confidence 3478999999874 443 2222221 2388999999999875 5556 8999999986
No 158
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.71 E-value=3.3e-17 Score=152.20 Aligned_cols=193 Identities=9% Similarity=-0.017 Sum_probs=132.7
Q ss_pred CCceEEE-EeeCCCeEEEEecCCCC---cEEEEEEecCCCEEEEEcC---------CCcEEEEeCCCCeee--EEecccc
Q psy3337 95 KEKNLRF-GFKTFDSVQTVFAGSES---LQRVVRLSRNGDLMVTGGT---------DGHLRLWSFPKMKPL--LHIEAHS 159 (297)
Q Consensus 95 ~d~~i~~-~~~~~~~~~~~~~~h~~---~v~~~~~s~~g~~l~s~~~---------d~~i~iwd~~~~~~~--~~~~~~~ 159 (297)
.|++|++ +..+++....+. +|.. .+.+++|||||++|++++. ++.|++||+.+++.+ ..+ .
T Consensus 34 ~d~~i~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l---~ 109 (719)
T 1z68_A 34 ADNNIVLYNIETGQSYTILS-NRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNEL---P 109 (719)
T ss_dssp TTSCEEEEESSSCCEEEEEC-HHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC---C
T ss_pred CCCCEEEEEcCCCcEEEEEc-cccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceec---C
Confidence 5889999 888888766654 4433 3889999999999998876 789999999988763 223 2
Q ss_pred CCeeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEe-----------eeeeeeeeCCCCeEEEE
Q psy3337 160 KEIDDVDFSISGEQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKR-----------CRYGLVEDSPKRSRLFT 228 (297)
Q Consensus 160 ~~v~~~~~sp~~~~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~s~~~~~l~~ 228 (297)
..+..++|||||+.|+.+. ++.|++||+.+++.......... ..++.. .....++|+|||+.|++
T Consensus 110 ~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~---~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~ 185 (719)
T 1z68_A 110 RPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRE---NKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAY 185 (719)
T ss_dssp SSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBT---TTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEE
T ss_pred cccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCc---CCeEcccccceeeeecccCcccEEECCCCCEEEE
Confidence 4688999999999999885 78999999988776543211111 111100 01135889999999998
Q ss_pred eccCc------------------------cccc--CCCCeEEEEeCCCCceE---EE-----eccCCC-eEEEEEcCCCC
Q psy3337 229 LANPL------------------------AQNK--RGISYVQQWDVDSGRLR---LA-----REMKES-LSALAVRDDGR 273 (297)
Q Consensus 229 ~~~~~------------------------~~~g--~~d~~i~~wd~~~~~~~---~~-----~~~~~~-v~~~~~s~dg~ 273 (297)
.+... -..| .....|++||+.+++.. .. +..+.. +.+++||||++
T Consensus 186 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~ 265 (719)
T 1z68_A 186 AEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDER 265 (719)
T ss_dssp EEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSE
T ss_pred EEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCe
Confidence 76410 0000 11238999999987652 21 223554 89999999988
Q ss_pred EEEEEecC-C--CeEEEEE----eCCcee
Q psy3337 274 FVAVGTMF-T--GSVFVYI----AFSLQM 295 (297)
Q Consensus 274 ~l~~~~~~-d--g~i~vwd----~~~~~~ 295 (297)
++++.... + ..|.+|| +.+++.
T Consensus 266 ~~~~~~~~~~~~~~l~~~d~~~~~~~g~~ 294 (719)
T 1z68_A 266 VCLQWLKRVQNVSVLSICDFREDWQTWDC 294 (719)
T ss_dssp EEEEEEESSTTEEEEEEEEECSSSSSEEC
T ss_pred EEEEEeccccCeEEEEEEcccCCCCCCce
Confidence 77775430 2 3588999 777664
No 159
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.70 E-value=3e-16 Score=142.37 Aligned_cols=178 Identities=10% Similarity=0.005 Sum_probs=127.3
Q ss_pred CCCCCceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCEEEEEcCC----CcEEEEeCCCCeeeEEeccccCCeeEEE
Q psy3337 92 IDSKEKNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTD----GHLRLWSFPKMKPLLHIEAHSKEIDDVD 166 (297)
Q Consensus 92 ~~~~d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d----~~i~iwd~~~~~~~~~~~~~~~~v~~~~ 166 (297)
+++.++.. + ++.+++...... .+. .+++|||||++|++++.+ ..|++||+.+++.. .+..|...+..++
T Consensus 128 s~~~~~~~-l~d~~~g~~~~l~~-~~~---~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~-~l~~~~~~~~~~~ 201 (582)
T 3o4h_A 128 GATEDRVA-LYALDGGGLRELAR-LPG---FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR-VFDSGEGSFSSAS 201 (582)
T ss_dssp EECSSCEE-EEEEETTEEEEEEE-ESS---CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCE-EECCSSCEEEEEE
T ss_pred ecCCCCce-EEEccCCcEEEeec-CCC---ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce-EeecCCCccccce
Confidence 44455555 6 888887655443 333 689999999999988777 78999999887754 6778888899999
Q ss_pred EccCCCEEEEEeCCC--cEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEE
Q psy3337 167 FSISGEQIVSIAKDG--KAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQ 244 (297)
Q Consensus 167 ~sp~~~~l~s~~~d~--~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~ 244 (297)
|+|||+.|+++..++ .|++||+.+++.. .+..+........ .......+|+|||..+++... ++.++
T Consensus 202 ~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~spdg~~~~~~~~--------~g~~~ 270 (582)
T 3o4h_A 202 ISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYR--PTAITWLGYLPDGRLAVVARR--------EGRSA 270 (582)
T ss_dssp ECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHC--CSEEEEEEECTTSCEEEEEEE--------TTEEE
T ss_pred ECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhh--hccccceeEcCCCcEEEEEEc--------CCcEE
Confidence 999999999888888 8999999988776 5444321100000 001112338999976666444 89999
Q ss_pred EEeCCCCceEEEeccCCCeEEEEEcCCCCEEEEEecCCC---eEEEEEeCC
Q psy3337 245 QWDVDSGRLRLAREMKESLSALAVRDDGRFVAVGTMFTG---SVFVYIAFS 292 (297)
Q Consensus 245 ~wd~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~dg---~i~vwd~~~ 292 (297)
+|++ ++..... ...+.+++|+ +|+++++++. +. .+++||+.+
T Consensus 271 l~~~--g~~~~~~--~~~v~~~~~s-dg~~l~~~s~-~~~p~~l~~~d~~~ 315 (582)
T 3o4h_A 271 VFID--GERVEAP--QGNHGRVVLW-RGKLVTSHTS-LSTPPRIVSLPSGE 315 (582)
T ss_dssp EEET--TEEECCC--SSEEEEEEEE-TTEEEEEEEE-TTEEEEEEEETTCC
T ss_pred EEEE--CCeeccC--CCceEEEEec-CCEEEEEEcC-CCCCCeEEEEcCCC
Confidence 9999 6655422 2348999999 9999988887 64 466666543
No 160
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.69 E-value=2e-14 Score=118.37 Aligned_cols=179 Identities=16% Similarity=0.095 Sum_probs=130.1
Q ss_pred CceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCeeeEEec--cccCCeeEEEEccCCC
Q psy3337 96 EKNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIE--AHSKEIDDVDFSISGE 172 (297)
Q Consensus 96 d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~--~~~~~v~~~~~sp~~~ 172 (297)
++.|++ + .+++.+..+...+...+.+++++|+|+++++...++.|.+||. .++.+..+. .+...+.+++++|+++
T Consensus 99 ~~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~p~~i~~~~~g~ 176 (286)
T 1q7f_A 99 THQIQIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQ-NGNVLHKFGCSKHLEFPNGVVVNDKQE 176 (286)
T ss_dssp GCEEEEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECT-TSCEEEEEECTTTCSSEEEEEECSSSE
T ss_pred CCEEEEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcC-CCCEEEEeCCCCccCCcEEEEECCCCC
Confidence 566766 5 6677766664345567899999999998888888899999995 455555553 3445689999999999
Q ss_pred EEEEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCC-eEEEEeCCCC
Q psy3337 173 QIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGIS-YVQQWDVDSG 251 (297)
Q Consensus 173 ~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~-~i~~wd~~~~ 251 (297)
++++...++.|++||. +++.+..+..+... .....++++++|..+++... ++ .|.+||.. +
T Consensus 177 l~v~~~~~~~i~~~~~-~g~~~~~~~~~g~~--------~~p~~i~~d~~G~l~v~~~~--------~~~~i~~~~~~-g 238 (286)
T 1q7f_A 177 IFISDNRAHCVKVFNY-EGQYLRQIGGEGIT--------NYPIGVGINSNGEILIADNH--------NNFNLTIFTQD-G 238 (286)
T ss_dssp EEEEEGGGTEEEEEET-TCCEEEEESCTTTS--------CSEEEEEECTTCCEEEEECS--------SSCEEEEECTT-S
T ss_pred EEEEECCCCEEEEEcC-CCCEEEEEccCCcc--------CCCcEEEECCCCCEEEEeCC--------CCEEEEEECCC-C
Confidence 8888788899999997 45555555432110 11224778999987766433 54 99999964 6
Q ss_pred ceEEEeccCC---CeEEEEEcCCCCEEEEEecCCCeEEEEEeCCceec
Q psy3337 252 RLRLAREMKE---SLSALAVRDDGRFVAVGTMFTGSVFVYIAFSLQMC 296 (297)
Q Consensus 252 ~~~~~~~~~~---~v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~~~~~ 296 (297)
+.+..+..+. .+.+++++|+|+++++ +. ++.|++|++....++
T Consensus 239 ~~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~-~~~v~v~~~~~~~pv 284 (286)
T 1q7f_A 239 QLISALESKVKHAQCFDVALMDDGSVVLA-SK-DYRLYIYRYVQLAPV 284 (286)
T ss_dssp CEEEEEEESSCCSCEEEEEEETTTEEEEE-ET-TTEEEEEECSCCCCT
T ss_pred CEEEEEcccCCCCcceeEEECCCCcEEEE-CC-CCeEEEEEccccccc
Confidence 6666665432 2789999999987666 67 999999998776554
No 161
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.68 E-value=5.4e-15 Score=126.27 Aligned_cols=197 Identities=12% Similarity=0.086 Sum_probs=140.4
Q ss_pred CCCceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCEEEEEc----------CCCcEEEEeCCCCeeeEEeccc----
Q psy3337 94 SKEKNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGG----------TDGHLRLWSFPKMKPLLHIEAH---- 158 (297)
Q Consensus 94 ~~d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~----------~d~~i~iwd~~~~~~~~~~~~~---- 158 (297)
..|+.|.+ |..+++.+..+. .+..+ .++|+|||++++++. .++.|.+||..+++.+..+...
T Consensus 28 ~~d~~v~v~D~~t~~~~~~i~-~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~ 104 (361)
T 2oiz_A 28 LTESRVHVYDYTNGKFLGMVP-TAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRV 104 (361)
T ss_dssp GGGCEEEEEETTTCCEEEEEE-CCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBC
T ss_pred cccCeEEEEECCCCeEEEEec-CCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCcccc
Confidence 34778888 999999888887 55554 899999999998876 3678999999998888777532
Q ss_pred --cCCeeEEEEccCCCEEEEEeC--CCcEEEEEcCCCceeee-eeccC-------CC-----------CceEEEEe----
Q psy3337 159 --SKEIDDVDFSISGEQIVSIAK--DGKAFVWNSKNGSLSKE-LKWNT-------PD-----------NIKYLFKR---- 211 (297)
Q Consensus 159 --~~~v~~~~~sp~~~~l~s~~~--d~~v~lwd~~~~~~~~~-~~~~~-------~~-----------~~~~~~~~---- 211 (297)
......++|+|+|++|+++.. ++.|.+||+.+++.+.. +.... |. +....+..
T Consensus 105 ~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g 184 (361)
T 2oiz_A 105 QGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDG 184 (361)
T ss_dssp CBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEETTSSEEEEEECTTS
T ss_pred ccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEECCCCcEEEEEECCCC
Confidence 345678999999999998864 68899999998877665 32110 00 00000000
Q ss_pred ---------------------------------------------------------------------eeeeeeeeCCC
Q psy3337 212 ---------------------------------------------------------------------CRYGLVEDSPK 222 (297)
Q Consensus 212 ---------------------------------------------------------------------~~~~~~~~s~~ 222 (297)
.....++++|+
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~d 264 (361)
T 2oiz_A 185 KVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRA 264 (361)
T ss_dssp SEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETT
T ss_pred cEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecC
Confidence 00001566777
Q ss_pred CeEEEEeccCccccc---CCCCeEEEEeCCCCceEEEeccCCCeEEEEEcCCCCEEEEEecCCCeEEEEEeCCc--eec
Q psy3337 223 RSRLFTLANPLAQNK---RGISYVQQWDVDSGRLRLAREMKESLSALAVRDDGRFVAVGTMFTGSVFVYIAFSL--QMC 296 (297)
Q Consensus 223 ~~~l~~~~~~~~~~g---~~d~~i~~wd~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~~--~~~ 296 (297)
+..++.+..+.-..+ .....|.+||+.+++.+..+..+. +.+++|+|||++|++++ ++.|.+||+.++ +.+
T Consensus 265 g~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~-p~~ia~spdg~~l~v~n--~~~v~v~D~~t~~l~~~ 340 (361)
T 2oiz_A 265 SGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD-ALSMTIDQQRNLMLTLD--GGNVNVYDISQPEPKLL 340 (361)
T ss_dssp TTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT-CCEEEEETTTTEEEEEC--SSCEEEEECSSSSCEEE
T ss_pred CCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC-eeEEEECCCCCEEEEeC--CCeEEEEECCCCcceee
Confidence 666665431000000 013589999999999999998888 99999999999988777 499999999999 764
No 162
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.65 E-value=1.2e-15 Score=141.85 Aligned_cols=139 Identities=11% Similarity=0.109 Sum_probs=106.0
Q ss_pred EEEEecCCCEEEEEcCCCcEEEEeCCCCeeeEEeccccC---CeeEEEEccCCCEEEEEeC---------CCcEEEEEcC
Q psy3337 122 VVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSK---EIDDVDFSISGEQIVSIAK---------DGKAFVWNSK 189 (297)
Q Consensus 122 ~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~---~v~~~~~sp~~~~l~s~~~---------d~~v~lwd~~ 189 (297)
.++|+|+|+++++ +.|+.|++||+.+++....+..|.. .+.+++|||||++|++++. ++.|++||+.
T Consensus 20 ~~~~s~dg~~~~~-~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~ 98 (719)
T 1z68_A 20 FPNWISGQEYLHQ-SADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLS 98 (719)
T ss_dssp CCEESSSSEEEEE-CTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETT
T ss_pred ccEECCCCeEEEE-cCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECC
Confidence 7899999965554 4699999999999988777765544 4899999999999998876 7899999999
Q ss_pred CCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCCCceEEEec-cCCC-e----
Q psy3337 190 NGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSGRLRLARE-MKES-L---- 263 (297)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~-~~~~-v---- 263 (297)
+++.+...... ..+..++|||||+.|+++. ++.|++||+.+++...... ++.. |
T Consensus 99 ~g~~~~~~~l~-----------~~~~~~~~SPDG~~la~~~---------~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~ 158 (719)
T 1z68_A 99 NGEFVRGNELP-----------RPIQYLCWSPVGSKLAYVY---------QNNIYLKQRPGDPPFQITFNGRENKIFNGI 158 (719)
T ss_dssp TTEECCSSCCC-----------SSBCCEEECSSTTCEEEEE---------TTEEEEESSTTSCCEECCCCCBTTTEEESS
T ss_pred CCccccceecC-----------cccccceECCCCCEEEEEE---------CCeEEEEeCCCCCcEEEecCCCcCCeEccc
Confidence 88763111111 1133478999999999864 6799999999887765432 2221 2
Q ss_pred -------------EEEEEcCCCCEEEEEecCC
Q psy3337 264 -------------SALAVRDDGRFVAVGTMFT 282 (297)
Q Consensus 264 -------------~~~~~s~dg~~l~~~~~~d 282 (297)
.+++|||||++|++++. |
T Consensus 159 ~~~v~~ee~~~~~~~~~wSPDG~~la~~~~-d 189 (719)
T 1z68_A 159 PDWVYEEEMLATKYALWWSPNGKFLAYAEF-N 189 (719)
T ss_dssp CCHHHHHHTTCSSCCEEECTTSSEEEEEEE-E
T ss_pred ccceeeeecccCcccEEECCCCCEEEEEEE-C
Confidence 48999999999999886 5
No 163
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.65 E-value=2e-15 Score=140.77 Aligned_cols=186 Identities=11% Similarity=0.002 Sum_probs=120.4
Q ss_pred ceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCeeeEE-eccccCCe------------
Q psy3337 97 KNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLH-IEAHSKEI------------ 162 (297)
Q Consensus 97 ~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~-~~~~~~~v------------ 162 (297)
+.+.+ ++.+++.. .+. .|...+..++|||||+.||.+ .++.|++||+.+++..+. ..++...+
T Consensus 92 ~~~~~~d~~~~~~~-~l~-~~~~~~~~~~~SPdG~~la~~-~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee 168 (740)
T 4a5s_A 92 ASYDIYDLNKRQLI-TEE-RIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEE 168 (740)
T ss_dssp EEEEEEETTTTEEC-CSS-CCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHH
T ss_pred eEEEEEECCCCcEE-Ecc-cCCCcceeeEECCCCCEEEEE-ECCeEEEEECCCCceEEEcCCCCccceecCcccccccch
Confidence 55667 88887654 344 777889999999999999988 468999999988775432 22332222
Q ss_pred -----eEEEEccCCCEEEEEeCCC------------------------------------cEEEEEcCC---Cce--eee
Q psy3337 163 -----DDVDFSISGEQIVSIAKDG------------------------------------KAFVWNSKN---GSL--SKE 196 (297)
Q Consensus 163 -----~~~~~sp~~~~l~s~~~d~------------------------------------~v~lwd~~~---~~~--~~~ 196 (297)
..+.|||||+.|+..+.|. +|++||+.+ ++. ...
T Consensus 169 ~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~ 248 (740)
T 4a5s_A 169 VFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQ 248 (740)
T ss_dssp TSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEE
T ss_pred hcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEE
Confidence 3589999999999875432 366777766 531 122
Q ss_pred eeccCC--CCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCCCc----eEE--Ee--ccCCC-eE-
Q psy3337 197 LKWNTP--DNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSGR----LRL--AR--EMKES-LS- 264 (297)
Q Consensus 197 ~~~~~~--~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~----~~~--~~--~~~~~-v~- 264 (297)
+..... .... .+..++|+|||+.++.... .++.+..|++||+.+++ +.. .+ ..+.. |.
T Consensus 249 l~~~~~~~~~~~------~~~~~~wspdg~~~~~~~~----r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~ 318 (740)
T 4a5s_A 249 ITAPASMLIGDH------YLCDVTWATQERISLQWLR----RIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGR 318 (740)
T ss_dssp ECCCHHHHTSCE------EEEEEEEEETTEEEEEEEE----SSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSS
T ss_pred ecCCccCCCCCe------EEEEEEEeCCCeEEEEEeC----CCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEcc
Confidence 211000 0001 2335889999997665443 13456689999999877 221 11 22332 33
Q ss_pred ----EEEEcCCCCEEE-EEecCCC--eEEEEEeCCcee
Q psy3337 265 ----ALAVRDDGRFVA-VGTMFTG--SVFVYIAFSLQM 295 (297)
Q Consensus 265 ----~~~~s~dg~~l~-~~~~~dg--~i~vwd~~~~~~ 295 (297)
.+.|+|||+.|+ ..+..+| .|++||+.+++.
T Consensus 319 ~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~ 356 (740)
T 4a5s_A 319 FRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDC 356 (740)
T ss_dssp SSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSC
T ss_pred CcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCce
Confidence 789999999877 6654244 688888876543
No 164
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.65 E-value=2.3e-14 Score=123.04 Aligned_cols=187 Identities=11% Similarity=0.041 Sum_probs=136.3
Q ss_pred eEEEEeeCCCeEEEEecCCCCcEEE-----EEEecCCCEEEEEcC-CC--cEEEEeCCCCeeeEEeccccCCeeEEEEcc
Q psy3337 98 NLRFGFKTFDSVQTVFAGSESLQRV-----VRLSRNGDLMVTGGT-DG--HLRLWSFPKMKPLLHIEAHSKEIDDVDFSI 169 (297)
Q Consensus 98 ~i~~~~~~~~~~~~~~~~h~~~v~~-----~~~s~~g~~l~s~~~-d~--~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp 169 (297)
.+.++..++..+..+. .|...... .+|||||++|+.++. ++ .|.+||+.+++.......+...+..+.|+|
T Consensus 12 ~~~~~~~~g~~~~~lt-~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~sp 90 (388)
T 3pe7_A 12 DTYQDASTGAQVTRLT-PPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSP 90 (388)
T ss_dssp EEEECTTTCCEEEECS-CTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECT
T ss_pred eEEecCCCCcceEEec-CCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcC
Confidence 4445777788887777 67666555 889999999998887 66 488899999887776666666666789999
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccC--------------ccc
Q psy3337 170 SGEQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANP--------------LAQ 235 (297)
Q Consensus 170 ~~~~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~--------------~~~ 235 (297)
|++.|+.++.++.|++||+.+++....+..+. ..... ....++|++..++..... ...
T Consensus 91 dg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~----~~~~~----~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~ 162 (388)
T 3pe7_A 91 DDDALFYVKDGRNLMRVDLATLEENVVYQVPA----EWVGY----GTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFY 162 (388)
T ss_dssp TSSEEEEEETTTEEEEEETTTCCEEEEEECCT----TEEEE----EEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHG
T ss_pred CCCEEEEEeCCCeEEEEECCCCcceeeeechh----hcccc----cceeECCCCCeeccccccCcccccccccchhhhhh
Confidence 99999999999999999999887765554332 11110 112358999988754310 011
Q ss_pred ccCCCCeEEEEeCCCCceEEEeccCCCeEEEEEcC-CCCEEEEEecCCC------eEEEEEeCCce
Q psy3337 236 NKRGISYVQQWDVDSGRLRLAREMKESLSALAVRD-DGRFVAVGTMFTG------SVFVYIAFSLQ 294 (297)
Q Consensus 236 ~g~~d~~i~~wd~~~~~~~~~~~~~~~v~~~~~s~-dg~~l~~~~~~dg------~i~vwd~~~~~ 294 (297)
....+..|++||+.+++..........+..++|+| ||+.|+.... ++ .|.++|+.+++
T Consensus 163 ~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~-~~~~~~~~~l~~~d~~~~~ 227 (388)
T 3pe7_A 163 FTKPCCRLMRVDLKTGESTVILQENQWLGHPIYRPYDDSTVAFCHE-GPHDLVDARMWLINEDGTN 227 (388)
T ss_dssp GGCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEEC-SCTTTSSCSEEEEETTSCC
T ss_pred ccCCcceEEEEECCCCceEEeecCCccccccEECCCCCCEEEEEEe-cCCCCCcceEEEEeCCCCc
Confidence 23456899999999987766655555599999999 9999988775 43 78888876543
No 165
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.65 E-value=3.7e-15 Score=139.00 Aligned_cols=193 Identities=11% Similarity=-0.009 Sum_probs=133.8
Q ss_pred CceEEE-EeeCCCeEEEEecCCCCc-----EEEEEEecCCCEEEEEcCC---------CcEEEEeCCCCeeeEEeccccC
Q psy3337 96 EKNLRF-GFKTFDSVQTVFAGSESL-----QRVVRLSRNGDLMVTGGTD---------GHLRLWSFPKMKPLLHIEAHSK 160 (297)
Q Consensus 96 d~~i~~-~~~~~~~~~~~~~~h~~~-----v~~~~~s~~g~~l~s~~~d---------~~i~iwd~~~~~~~~~~~~~~~ 160 (297)
|++|++ ++.+++....+. +|... ...++|||||++|+.++.+ +.+.+||+.+++.. .+..|..
T Consensus 35 ~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~-~l~~~~~ 112 (740)
T 4a5s_A 35 ENNILVFNAEYGNSSVFLE-NSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLI-TEERIPN 112 (740)
T ss_dssp TTEEEEEETTTCCEEEEEC-TTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC-CSSCCCT
T ss_pred CCcEEEEECCCCceEEEEe-chhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEE-EcccCCC
Confidence 889999 999998876666 66532 2347899999999998876 56679999998754 4667788
Q ss_pred CeeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEe-----------eeeeeeeeCCCCeEEEEe
Q psy3337 161 EIDDVDFSISGEQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKR-----------CRYGLVEDSPKRSRLFTL 229 (297)
Q Consensus 161 ~v~~~~~sp~~~~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~s~~~~~l~~~ 229 (297)
.+..++|||||+.||.+ .|+.|++||+.++...+... .... ...+.. .....++|||||+.|+..
T Consensus 113 ~~~~~~~SPdG~~la~~-~~~~i~~~~~~~~~~~~lt~-~g~~--~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~ 188 (740)
T 4a5s_A 113 NTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYRITW-TGKE--DIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYA 188 (740)
T ss_dssp TEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEECCS-CCBT--TTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEE
T ss_pred cceeeEECCCCCEEEEE-ECCeEEEEECCCCceEEEcC-CCCc--cceecCcccccccchhcCCCcceEECCCCCEEEEE
Confidence 89999999999999988 46899999998876543221 1100 111110 112247899999999887
Q ss_pred ccC--------------------------cccccCCC--CeEEEEeCCC---C---ceEEEec-----cCCC-eEEEEEc
Q psy3337 230 ANP--------------------------LAQNKRGI--SYVQQWDVDS---G---RLRLARE-----MKES-LSALAVR 269 (297)
Q Consensus 230 ~~~--------------------------~~~~g~~d--~~i~~wd~~~---~---~~~~~~~-----~~~~-v~~~~~s 269 (297)
... +-..|... ..|++||+.+ + +...... .+.. +..++|+
T Consensus 189 ~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ws 268 (740)
T 4a5s_A 189 QFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWA 268 (740)
T ss_dssp EEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEE
T ss_pred EEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEe
Confidence 431 00112222 2689999998 7 3333322 2444 9999999
Q ss_pred CCCCEEEEEecC---CCeEEEEEeCCce
Q psy3337 270 DDGRFVAVGTMF---TGSVFVYIAFSLQ 294 (297)
Q Consensus 270 ~dg~~l~~~~~~---dg~i~vwd~~~~~ 294 (297)
|||+.++..... +..|++||+.+++
T Consensus 269 pdg~~~~~~~~r~~~~~~i~~~d~~tg~ 296 (740)
T 4a5s_A 269 TQERISLQWLRRIQNYSVMDICDYDESS 296 (740)
T ss_dssp ETTEEEEEEEESSTTEEEEEEEEEETTT
T ss_pred CCCeEEEEEeCCCCCEEEEEEEECCCCc
Confidence 999977665431 3479999998876
No 166
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.63 E-value=3.5e-14 Score=116.66 Aligned_cols=188 Identities=13% Similarity=0.090 Sum_probs=147.8
Q ss_pred CCCCCCCceEEE-EeeCCCeEEEEecCCC-CcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCeeeEEecccc-CCeeEEE
Q psy3337 90 NSIDSKEKNLRF-GFKTFDSVQTVFAGSE-SLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHS-KEIDDVD 166 (297)
Q Consensus 90 ~~~~~~d~~i~~-~~~~~~~~~~~~~~h~-~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~v~~~~ 166 (297)
..+++.++.|.+ |..+|+.+..+. .+. ..+.++.++|+|++|+ +.++.|..||. +++.+..+..+. ..+.++.
T Consensus 8 lv~~~~~~~v~~~d~~tG~~~w~~~-~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~~ 83 (276)
T 3no2_A 8 LVGGSGWNKIAIINKDTKEIVWEYP-LEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQTAR 83 (276)
T ss_dssp EEECTTCSEEEEEETTTTEEEEEEE-CCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEEEEE
T ss_pred EEeeCCCCEEEEEECCCCeEEEEeC-CCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCccccccE
Confidence 446788999999 988999998887 444 4678999999999888 35778999998 899998888653 4788999
Q ss_pred EccCCCEEEEEeC-CCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEE
Q psy3337 167 FSISGEQIVSIAK-DGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQ 245 (297)
Q Consensus 167 ~sp~~~~l~s~~~-d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~ 245 (297)
+.|+|+++++.+. ++.|..+|. +|+.+..+......... ......+...++|.++++... ++.|..
T Consensus 84 ~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~----~~~~~~v~~~~~G~~lv~~~~--------~~~v~~ 150 (276)
T 3no2_A 84 ILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERP----HAQFRQINKNKKGNYLVPLFA--------TSEVRE 150 (276)
T ss_dssp ECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSG----GGSCSCCEECTTSCEEEEETT--------TTEEEE
T ss_pred ECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcc----cccccCceECCCCCEEEEecC--------CCEEEE
Confidence 9999999999887 778888885 77777766532110000 001123456899999988554 899999
Q ss_pred EeCCCCceEEEeccCCCeEEEEEcCCCCEEEEEecCCCeEEEEEeCCceec
Q psy3337 246 WDVDSGRLRLAREMKESLSALAVRDDGRFVAVGTMFTGSVFVYIAFSLQMC 296 (297)
Q Consensus 246 wd~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~~~~~ 296 (297)
||.. |+.+..+.....+.++.+.++|+.++++.. ++.|..||..+|+.+
T Consensus 151 ~d~~-G~~~w~~~~~~~~~~~~~~~~g~~~v~~~~-~~~v~~~d~~tG~~~ 199 (276)
T 3no2_A 151 IAPN-GQLLNSVKLSGTPFSSAFLDNGDCLVACGD-AHCFVQLNLESNRIV 199 (276)
T ss_dssp ECTT-SCEEEEEECSSCCCEEEECTTSCEEEECBT-TSEEEEECTTTCCEE
T ss_pred ECCC-CCEEEEEECCCCccceeEcCCCCEEEEeCC-CCeEEEEeCcCCcEE
Confidence 9998 999998887666778888999999999998 889999999988764
No 167
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.63 E-value=8.3e-14 Score=118.59 Aligned_cols=192 Identities=13% Similarity=0.095 Sum_probs=124.3
Q ss_pred CCCCceEEE-Ee--eCCCeEEEEecCCCCcEEEEEEecCCCEEEEEcCC----CcEEEEeCCC--Ce--eeEEeccccCC
Q psy3337 93 DSKEKNLRF-GF--KTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTD----GHLRLWSFPK--MK--PLLHIEAHSKE 161 (297)
Q Consensus 93 ~~~d~~i~~-~~--~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d----~~i~iwd~~~--~~--~~~~~~~~~~~ 161 (297)
.+.++.|.+ .+ .+++....... +...+..++|+|+|++|++++.+ +.|.+|++.. ++ .+..+..+...
T Consensus 23 ~~~~~~i~~~~~d~~~g~~~~~~~~-~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~ 101 (361)
T 3scy_A 23 SGNSKGIYTFRFNEETGESLPLSDA-EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGAD 101 (361)
T ss_dssp SSSCCEEEEEEEETTTCCEEEEEEE-ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSC
T ss_pred CCCCCCEEEEEEeCCCCCEEEeecc-cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCC
Confidence 345667777 44 55665444332 56667789999999999988876 7999998864 44 33344445566
Q ss_pred eeEEEEccCCCEEEEEe-CCCcEEEEEcCCCceeeeee---ccCCCCce-EEEEeeeeeeeeeCCCCeEEEEeccCcccc
Q psy3337 162 IDDVDFSISGEQIVSIA-KDGKAFVWNSKNGSLSKELK---WNTPDNIK-YLFKRCRYGLVEDSPKRSRLFTLANPLAQN 236 (297)
Q Consensus 162 v~~~~~sp~~~~l~s~~-~d~~v~lwd~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~ 236 (297)
...+++ ++++|++++ .++.|.+|++.....+..+. .+...+.. ..........++|+|+|++++++..
T Consensus 102 p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~----- 174 (361)
T 3scy_A 102 PCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDL----- 174 (361)
T ss_dssp EEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEET-----
T ss_pred cEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeC-----
Confidence 778888 788777766 57899999997543332221 11000000 0000011234789999998777532
Q ss_pred cCCCCeEEEEeCCCCc-------e-------EEEeccCCCeEEEEEcCCCCEEEEEecCCCeEEEEEeCCce
Q psy3337 237 KRGISYVQQWDVDSGR-------L-------RLAREMKESLSALAVRDDGRFVAVGTMFTGSVFVYIAFSLQ 294 (297)
Q Consensus 237 g~~d~~i~~wd~~~~~-------~-------~~~~~~~~~v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~~~ 294 (297)
.++.|.+|++.... . ...+.....+..++|+|||++|++++..++.|.+||+.+++
T Consensus 175 --~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~ 244 (361)
T 3scy_A 175 --GTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGM 244 (361)
T ss_dssp --TTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTE
T ss_pred --CCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCc
Confidence 47899999887532 2 11222333489999999999888777338999999998664
No 168
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.61 E-value=4.5e-13 Score=112.82 Aligned_cols=188 Identities=10% Similarity=0.048 Sum_probs=133.2
Q ss_pred CCCCCceEEE-EeeCCC--eEEEEe--------cCCCCcEEEEEEec-CCCEEEEEc-CCCcEEEEeCCCCeeeEEeccc
Q psy3337 92 IDSKEKNLRF-GFKTFD--SVQTVF--------AGSESLQRVVRLSR-NGDLMVTGG-TDGHLRLWSFPKMKPLLHIEAH 158 (297)
Q Consensus 92 ~~~~d~~i~~-~~~~~~--~~~~~~--------~~h~~~v~~~~~s~-~g~~l~s~~-~d~~i~iwd~~~~~~~~~~~~~ 158 (297)
+...++.|++ +. .+. .+..+. .++......++++| +++++++.+ .++.|++|| .+++.+..+...
T Consensus 107 ~d~~~~~v~~~~~-~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~~~~ 184 (329)
T 3fvz_A 107 TDVALHQVFKLDP-HSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQWGEE 184 (329)
T ss_dssp EETTTTEEEEECT-TCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEECEE
T ss_pred EECCCCEEEEEeC-CCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEeccC
Confidence 4445566666 44 333 344441 13444688999999 788888886 689999999 567766666422
Q ss_pred ----------cCCeeEEEEccC-CCEEEEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEE
Q psy3337 159 ----------SKEIDDVDFSIS-GEQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLF 227 (297)
Q Consensus 159 ----------~~~v~~~~~sp~-~~~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~ 227 (297)
-.....++++|+ +.++++...++.|++||..+++.+..+....... . ...++++| +..+.
T Consensus 185 g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~--~------~~~~~~~p-g~~~~ 255 (329)
T 3fvz_A 185 SSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGR--N------VFAISYIP-GFLFA 255 (329)
T ss_dssp CCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTT--C------EEEEEEET-TEEEE
T ss_pred CCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCC--C------cceeeecC-CEEEE
Confidence 234889999998 7777777788999999998888888775432211 1 11366788 43333
Q ss_pred EeccCcccccCCCCeEEEEeCCCCceEEEec---cCCC-eEEEEEcCCCCEEEEEecCCCeEEEEEeCC
Q psy3337 228 TLANPLAQNKRGISYVQQWDVDSGRLRLARE---MKES-LSALAVRDDGRFVAVGTMFTGSVFVYIAFS 292 (297)
Q Consensus 228 ~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~---~~~~-v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~ 292 (297)
. .....++...+..|++||+.+++.+..+. .+.. +..++++|+|.++++... ++.|++|++..
T Consensus 256 ~-~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~-~~~I~~~~~~~ 322 (329)
T 3fvz_A 256 V-NGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAH-TNTVWKFTLTE 322 (329)
T ss_dssp E-ECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESS-SCCEEEEEEEE
T ss_pred e-CCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECC-CCEEEEEeCCc
Confidence 3 33344556667899999999999998874 3333 999999999977777777 99999999864
No 169
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.59 E-value=1.4e-13 Score=117.59 Aligned_cols=181 Identities=10% Similarity=0.078 Sum_probs=119.8
Q ss_pred eEEE-Eee-CCCeEEEEe-cCCCCcEEEEEEecCCCE--EEEEc-------------CCCcEEEEeCC-CCeeeEEec--
Q psy3337 98 NLRF-GFK-TFDSVQTVF-AGSESLQRVVRLSRNGDL--MVTGG-------------TDGHLRLWSFP-KMKPLLHIE-- 156 (297)
Q Consensus 98 ~i~~-~~~-~~~~~~~~~-~~h~~~v~~~~~s~~g~~--l~s~~-------------~d~~i~iwd~~-~~~~~~~~~-- 156 (297)
.|.+ ++. +++...... ..+. .+.+++|+|+|++ ++++. .++.+.+|++. +++....+.
T Consensus 61 ~v~~~~~~~~g~~~~~~~~~~~g-~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~ 139 (365)
T 1jof_A 61 KWSSFAVKSPTEIVHEASHPIGG-HPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNY 139 (365)
T ss_dssp EEEEEEEEETTEEEEEEEEECCS-SGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEE
T ss_pred eEEEEEECCCCCEEEeeEeecCC-CCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeE
Confidence 7887 776 776544332 1112 2456899999984 55553 68999999997 465543333
Q ss_pred --cccCCeeEEEEccCCCEEEEEeC-CCcEEEEEcC-CCceee--eeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEec
Q psy3337 157 --AHSKEIDDVDFSISGEQIVSIAK-DGKAFVWNSK-NGSLSK--ELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLA 230 (297)
Q Consensus 157 --~~~~~v~~~~~sp~~~~l~s~~~-d~~v~lwd~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~ 230 (297)
.+...+.+++|+|+|++|+++.. ++.|++||+. +++... .+....+ + .....++|+|+|++++++.
T Consensus 140 ~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~-g-------~~p~~~~~spdg~~l~v~~ 211 (365)
T 1jof_A 140 EYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDP-G-------DHPRWVAMHPTGNYLYALM 211 (365)
T ss_dssp ECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSST-T-------CCEEEEEECTTSSEEEEEE
T ss_pred EeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCC-C-------CCCCEeEECCCCCEEEEEE
Confidence 24567999999999998887764 6799999998 665432 2221100 1 1123478999999988754
Q ss_pred cCcccccCCCCeEEEEeCC--CCceEE------Eecc----CC-------CeEEEE-EcCCCCEEEEEecCCC-----eE
Q psy3337 231 NPLAQNKRGISYVQQWDVD--SGRLRL------AREM----KE-------SLSALA-VRDDGRFVAVGTMFTG-----SV 285 (297)
Q Consensus 231 ~~~~~~g~~d~~i~~wd~~--~~~~~~------~~~~----~~-------~v~~~~-~s~dg~~l~~~~~~dg-----~i 285 (297)
. .++.|.+|++. +++... .+.. +. .+..++ |+|||++|+++...++ .|
T Consensus 212 ~-------~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i 284 (365)
T 1jof_A 212 E-------AGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYI 284 (365)
T ss_dssp T-------TTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEE
T ss_pred C-------CCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeE
Confidence 3 36789998765 465421 2221 12 478999 9999999887764123 89
Q ss_pred EEEEeC-Cce
Q psy3337 286 FVYIAF-SLQ 294 (297)
Q Consensus 286 ~vwd~~-~~~ 294 (297)
.+|++. +++
T Consensus 285 ~v~~~~~~g~ 294 (365)
T 1jof_A 285 AGFKLRDCGS 294 (365)
T ss_dssp EEEEECTTSC
T ss_pred EEEEECCCCC
Confidence 999995 554
No 170
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.58 E-value=1.6e-13 Score=117.67 Aligned_cols=181 Identities=13% Similarity=0.030 Sum_probs=127.8
Q ss_pred eEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCeeeEEeccccCCeeEEE--EccCCCEE
Q psy3337 98 NLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVD--FSISGEQI 174 (297)
Q Consensus 98 ~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~--~sp~~~~l 174 (297)
.|.+ ++.+++...... ++...+..+.|+|||+.|+.++.++.|++||+.+++....+..+...+.... ++|+++++
T Consensus 61 ~l~~~d~~~g~~~~lt~-~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l 139 (388)
T 3pe7_A 61 NYYLLDLNTQVATQLTE-GRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKL 139 (388)
T ss_dssp EEEEEETTTCEEEECCC-SSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEE
T ss_pred eEEEEeCCCCceEEeee-CCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCee
Confidence 4777 888877665554 6666555778999999999999999999999999887666665665554444 48999988
Q ss_pred EEE----------------------eCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCC-CCeEEEEecc
Q psy3337 175 VSI----------------------AKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSP-KRSRLFTLAN 231 (297)
Q Consensus 175 ~s~----------------------~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-~~~~l~~~~~ 231 (297)
+.. ..+..|++||+.+++...... +. ..+..+.|+| ||+.|+.+..
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~-~~----------~~~~~~~~sp~dg~~l~~~~~ 208 (388)
T 3pe7_A 140 VGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQ-EN----------QWLGHPIYRPYDDSTVAFCHE 208 (388)
T ss_dssp EEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEE-ES----------SCEEEEEEETTEEEEEEEEEC
T ss_pred ccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeec-CC----------ccccccEECCCCCCEEEEEEe
Confidence 743 234679999998886543332 21 1233577999 9999888764
Q ss_pred CcccccC---CCCeEEEEeCCCCceEEEeccCC--CeEEEEEcCCCCEEEEEecCCC----eEEEEEeCCcee
Q psy3337 232 PLAQNKR---GISYVQQWDVDSGRLRLAREMKE--SLSALAVRDDGRFVAVGTMFTG----SVFVYIAFSLQM 295 (297)
Q Consensus 232 ~~~~~g~---~d~~i~~wd~~~~~~~~~~~~~~--~v~~~~~s~dg~~l~~~~~~dg----~i~vwd~~~~~~ 295 (297)
+. ....|.++|+..++......... .+..++|+|||+.|+..+..++ .|++||+.+++.
T Consensus 209 -----~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~ 276 (388)
T 3pe7_A 209 -----GPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLEN 276 (388)
T ss_dssp -----SCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCE
T ss_pred -----cCCCCCcceEEEEeCCCCceEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCce
Confidence 22 14488999988665554444442 3788999999998765443122 399999988763
No 171
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.56 E-value=1.2e-12 Score=117.80 Aligned_cols=196 Identities=11% Similarity=0.056 Sum_probs=141.5
Q ss_pred CCCCCCceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCEEEEEcCCCcEEEEeCC--CCeeeEEeccccCCeeEEEE
Q psy3337 91 SIDSKEKNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFP--KMKPLLHIEAHSKEIDDVDF 167 (297)
Q Consensus 91 ~~~~~d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~--~~~~~~~~~~~~~~v~~~~~ 167 (297)
.+...+++|.+ |..+++.+..+..+ ..+..+.|+|||+++++++.|+.|.+||+. +++.+..+.... ....++|
T Consensus 171 V~~~~~~~V~viD~~t~~v~~~i~~g--~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~-~P~~ia~ 247 (567)
T 1qks_A 171 VTLRDAGQIALIDGSTYEIKTVLDTG--YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGS-EARSIET 247 (567)
T ss_dssp EEETTTTEEEEEETTTCCEEEEEECS--SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCS-EEEEEEE
T ss_pred EEeCCCCeEEEEECCCCeEEEEEeCC--CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCC-CCceeEE
Confidence 35667889999 99999999888633 245699999999999999999999999995 777777776533 4679999
Q ss_pred c----cCCCEEEEEeC-CCcEEEEEcCCCceeeeeeccCCCCceEEEE-eeeeeeeeeCCCCeEEEEeccCcccccCCCC
Q psy3337 168 S----ISGEQIVSIAK-DGKAFVWNSKNGSLSKELKWNTPDNIKYLFK-RCRYGLVEDSPKRSRLFTLANPLAQNKRGIS 241 (297)
Q Consensus 168 s----p~~~~l~s~~~-d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~ 241 (297)
+ |||++++++.. +++|.++|..+.+.+..+...........+. ..++..+..++++..++.. -...+
T Consensus 248 s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~-------~~~~g 320 (567)
T 1qks_A 248 SKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVN-------VKETG 320 (567)
T ss_dssp CCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEE-------ETTTT
T ss_pred ccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEE-------ecCCC
Confidence 9 69998887764 5999999999988887765321000000000 1133345667775544432 23479
Q ss_pred eEEEEeCCCCce--EEEeccCCCeEEEEEcCCCCEEEEEecCCCeEEEEEeCCceec
Q psy3337 242 YVQQWDVDSGRL--RLAREMKESLSALAVRDDGRFVAVGTMFTGSVFVYIAFSLQMC 296 (297)
Q Consensus 242 ~i~~wd~~~~~~--~~~~~~~~~v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~~~~~ 296 (297)
.|.++|....+. +..+........+.|+|+|++|+++...++.|.++|+.+++.+
T Consensus 321 ~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~ 377 (567)
T 1qks_A 321 KILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLV 377 (567)
T ss_dssp EEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEE
T ss_pred eEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEE
Confidence 999999987542 2333333348889999999998877654899999999998764
No 172
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.55 E-value=1.7e-13 Score=126.05 Aligned_cols=187 Identities=11% Similarity=-0.015 Sum_probs=123.2
Q ss_pred CCCceEEE-EeeCCCeEEEEecCCCCcEE---------EEEEe--cCCCE-EEEEcC-CCcEEEEeCC--C-CeeeEEec
Q psy3337 94 SKEKNLRF-GFKTFDSVQTVFAGSESLQR---------VVRLS--RNGDL-MVTGGT-DGHLRLWSFP--K-MKPLLHIE 156 (297)
Q Consensus 94 ~~d~~i~~-~~~~~~~~~~~~~~h~~~v~---------~~~~s--~~g~~-l~s~~~-d~~i~iwd~~--~-~~~~~~~~ 156 (297)
..++...| ....+.....+. .|...+. ...|+ |||+. |+..+. +..|++|++. . ++ ...+.
T Consensus 44 ~~~~~~~l~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~-~~~l~ 121 (662)
T 3azo_A 44 AEAGRATLVRRRADGAEESAL-PAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAV-PRPLT 121 (662)
T ss_dssp TTTTEEEEEEECTTSCEEESS-CTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCC-CEECS
T ss_pred ccCCcEEEEEECCCCCcceeC-CCCccccccccccCCccceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCC-CEecc
Confidence 44566666 334444455565 5655555 56666 99988 766544 5677777765 2 33 44555
Q ss_pred c-----ccCCeeEEEEccCCCEEEEEeCC----------CcEEEEEcCC------Cceeeeee-ccCCCCceEEEEeeee
Q psy3337 157 A-----HSKEIDDVDFSISGEQIVSIAKD----------GKAFVWNSKN------GSLSKELK-WNTPDNIKYLFKRCRY 214 (297)
Q Consensus 157 ~-----~~~~v~~~~~sp~~~~l~s~~~d----------~~v~lwd~~~------~~~~~~~~-~~~~~~~~~~~~~~~~ 214 (297)
. |...+.+++|+|||+.|++++.+ ..|++||+.+ +.. ..+. .+. . .+
T Consensus 122 ~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~l~~~~~----~------~~ 190 (662)
T 3azo_A 122 PVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAV-RELSDDAH----R------FV 190 (662)
T ss_dssp CCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGS-EESSCSCS----S------EE
T ss_pred CCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCce-eEEEecCC----C------cc
Confidence 5 66778999999999999988876 5899999987 443 3332 221 1 12
Q ss_pred eeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCC-CC---ceEEEeccCC-CeEEEEEcCCCCEEEEEecCCC--eEEE
Q psy3337 215 GLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVD-SG---RLRLAREMKE-SLSALAVRDDGRFVAVGTMFTG--SVFV 287 (297)
Q Consensus 215 ~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~-~~---~~~~~~~~~~-~v~~~~~s~dg~~l~~~~~~dg--~i~v 287 (297)
..++|+|||++|+..+...-...-....|++||+. ++ +.......+. .+..++|+|||++++++.. ++ .|++
T Consensus 191 ~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~-~~~~~l~~ 269 (662)
T 3azo_A 191 TGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDR-TGWWNLHR 269 (662)
T ss_dssp CCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECT-TSSCEEEE
T ss_pred cCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECC-CCCeEEEE
Confidence 24779999999988654100000012589999999 57 4444445543 4999999999997777777 88 6677
Q ss_pred EEeCCce
Q psy3337 288 YIAFSLQ 294 (297)
Q Consensus 288 wd~~~~~ 294 (297)
||+.+++
T Consensus 270 ~~~~~~~ 276 (662)
T 3azo_A 270 VDPATGA 276 (662)
T ss_dssp ECTTTCC
T ss_pred EECCCCc
Confidence 7765554
No 173
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.54 E-value=9.8e-13 Score=110.75 Aligned_cols=188 Identities=13% Similarity=0.068 Sum_probs=132.2
Q ss_pred CCceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCe-eeEEe---------ccccCCee
Q psy3337 95 KEKNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMK-PLLHI---------EAHSKEID 163 (297)
Q Consensus 95 ~d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~-~~~~~---------~~~~~~v~ 163 (297)
.+++|.+ +..+++.+..+..++......++++|+|+++++...++.|++||..... .+..+ ..+-....
T Consensus 67 ~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~ 146 (329)
T 3fvz_A 67 EEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPT 146 (329)
T ss_dssp CSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEE
T ss_pred cCCcEEEEECCCCeEEeccCCCccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCc
Confidence 3567888 8888888766643455678899999999999999899999999975442 45555 23445689
Q ss_pred EEEEcc-CCCEEEEEe-CCCcEEEEEcCCCceeeeeeccCCC----CceEEEEeeeeeeeeeCCC-CeEEEEeccCcccc
Q psy3337 164 DVDFSI-SGEQIVSIA-KDGKAFVWNSKNGSLSKELKWNTPD----NIKYLFKRCRYGLVEDSPK-RSRLFTLANPLAQN 236 (297)
Q Consensus 164 ~~~~sp-~~~~l~s~~-~d~~v~lwd~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~s~~-~~~l~~~~~~~~~~ 236 (297)
.++|+| ++.++++.+ .++.|++|| .++..+..+...... ...+ .....++++|+ +..+++-
T Consensus 147 ~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~----~~p~gia~d~~~g~l~v~d------- 214 (329)
T 3fvz_A 147 DVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQF----SVPHSLALVPHLDQLCVAD------- 214 (329)
T ss_dssp EEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEECEECCSSSCCTTEE----SCEEEEEEETTTTEEEEEE-------
T ss_pred EEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEeccCCCCCCCCCccc----CCCcEEEEECCCCEEEEEE-------
Confidence 999999 788888876 689999999 567776665432210 0011 11235888998 5555553
Q ss_pred cCCCCeEEEEeCCCCceEEEecc--CC-CeEEEEEcC------CCCEEEEEecCCCeEEEEEeCCceec
Q psy3337 237 KRGISYVQQWDVDSGRLRLAREM--KE-SLSALAVRD------DGRFVAVGTMFTGSVFVYIAFSLQMC 296 (297)
Q Consensus 237 g~~d~~i~~wd~~~~~~~~~~~~--~~-~v~~~~~s~------dg~~l~~~~~~dg~i~vwd~~~~~~~ 296 (297)
..++.|++||..+++.+..+.. +. .+.+++|+| +|...++... +..|++||+.+++.+
T Consensus 215 -~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~-~~~v~~~~~~~g~~~ 281 (329)
T 3fvz_A 215 -RENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQE-PVQGFVMNFSSGEII 281 (329)
T ss_dssp -TTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSC-CCCEEEEETTTCCEE
T ss_pred -CCCCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCEEeccCC-CcEEEEEEcCCCeEE
Confidence 3478999999998998888754 23 388999999 3332223333 558999998887654
No 174
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.52 E-value=3.3e-12 Score=103.99 Aligned_cols=182 Identities=8% Similarity=-0.032 Sum_probs=122.9
Q ss_pred CceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCeeeEEeccccCCeeEEEEccCCCEE
Q psy3337 96 EKNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQI 174 (297)
Q Consensus 96 d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l 174 (297)
++.|.+ +..... ...+.......+..++++|+|+++++...++.|.+|+..+.............+.+++++|+++++
T Consensus 86 ~~~i~~~d~~~~~-~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~ 164 (270)
T 1rwi_B 86 NNRVVTLAAGSNN-QTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVY 164 (270)
T ss_dssp TTEEEEECTTCSC-CEECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEE
T ss_pred CCEEEEEeCCCce-EeeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEE
Confidence 455555 544433 222321333568899999999988887788899999865544333222333467899999999977
Q ss_pred EEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCCCceE
Q psy3337 175 VSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSGRLR 254 (297)
Q Consensus 175 ~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~~ 254 (297)
++...++.|.+||.............. .....++++++|..+++.. .++.|.+||.......
T Consensus 165 v~~~~~~~i~~~~~~~~~~~~~~~~~~----------~~p~~i~~d~~g~l~v~~~--------~~~~v~~~~~~~~~~~ 226 (270)
T 1rwi_B 165 VTDTDNNRVVKLEAESNNQVVLPFTDI----------TAPWGIAVDEAGTVYVTEH--------NTNQVVKLLAGSTTST 226 (270)
T ss_dssp EEEGGGTEEEEECTTTCCEEECCCSSC----------CSEEEEEECTTCCEEEEET--------TTSCEEEECTTCSCCE
T ss_pred EEECCCCEEEEEecCCCceEeecccCC----------CCceEEEECCCCCEEEEEC--------CCCcEEEEcCCCCcce
Confidence 777778899999987654432211110 1123477899996555533 3788999999765444
Q ss_pred EEeccC-CCeEEEEEcCCCCEEEEEecCCCeEEEEEeCCceecC
Q psy3337 255 LAREMK-ESLSALAVRDDGRFVAVGTMFTGSVFVYIAFSLQMCR 297 (297)
Q Consensus 255 ~~~~~~-~~v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~~~~~~ 297 (297)
.....+ ..+.+++++++|+++++... ++.|++|++...+..+
T Consensus 227 ~~~~~~~~~p~~i~~~~~g~l~v~~~~-~~~v~~~~~~~~~~~~ 269 (270)
T 1rwi_B 227 VLPFTGLNTPLAVAVDSDRTVYVADRG-NDRVVKLTSLEHHHHH 269 (270)
T ss_dssp ECCCCSCSCEEEEEECTTCCEEEEEGG-GTEEEEECCCGGGSCC
T ss_pred eeccCCCCCceeEEECCCCCEEEEECC-CCEEEEEcCCCccccC
Confidence 332222 34899999999998888888 9999999998876653
No 175
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.52 E-value=5.8e-12 Score=105.85 Aligned_cols=184 Identities=13% Similarity=0.043 Sum_probs=125.8
Q ss_pred CCceEEEEeeCCCeEEEEecCCCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCeeeEEeccccCCeeEEEEccCCCEE
Q psy3337 95 KEKNLRFGFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQI 174 (297)
Q Consensus 95 ~d~~i~~~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l 174 (297)
.++.++.+ .++....+. .+...+.+++|+|+|++++++..++.|.+||..+++....+..+...+.+++|+|+++++
T Consensus 25 ~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~ 101 (333)
T 2dg1_A 25 SESELQTI--TAEPWLEIS-KKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLF 101 (333)
T ss_dssp CGGGSCEE--ECEEEEEEE-SSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEE
T ss_pred ecccCccc--ccceeEEEe-ccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEE
Confidence 34455544 344555666 666678999999999988888899999999998877655443566789999999999988
Q ss_pred EEEeCC----CcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCC
Q psy3337 175 VSIAKD----GKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDS 250 (297)
Q Consensus 175 ~s~~~d----~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~ 250 (297)
++...+ +.|.+||..++.....+....+ ......++++|+|..+++..... .....+.|..||..+
T Consensus 102 v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~--------~~~~~~i~~d~~g~l~v~~~~~~--~~~~~~~l~~~~~~~ 171 (333)
T 2dg1_A 102 VCYLGDFKSTGGIFAATENGDNLQDIIEDLST--------AYCIDDMVFDSKGGFYFTDFRGY--STNPLGGVYYVSPDF 171 (333)
T ss_dssp EEECTTSSSCCEEEEECTTSCSCEEEECSSSS--------CCCEEEEEECTTSCEEEEECCCB--TTBCCEEEEEECTTS
T ss_pred EEeCCCCCCCceEEEEeCCCCEEEEEEccCcc--------CCcccceEECCCCCEEEEecccc--ccCCCceEEEEeCCC
Confidence 877666 6899999887655433321111 11234577899998776643200 001135677777776
Q ss_pred CceEEEeccCCCeEEEEEcCCCCEEEEE-ecCCCeEEEEEeCC
Q psy3337 251 GRLRLAREMKESLSALAVRDDGRFVAVG-TMFTGSVFVYIAFS 292 (297)
Q Consensus 251 ~~~~~~~~~~~~v~~~~~s~dg~~l~~~-~~~dg~i~vwd~~~ 292 (297)
++..........+..++|+|+|++|+++ .. ++.|.+||+.+
T Consensus 172 ~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~-~~~i~~~d~~~ 213 (333)
T 2dg1_A 172 RTVTPIIQNISVANGIALSTDEKVLWVTETT-ANRLHRIALED 213 (333)
T ss_dssp CCEEEEEEEESSEEEEEECTTSSEEEEEEGG-GTEEEEEEECT
T ss_pred CEEEEeecCCCcccceEECCCCCEEEEEeCC-CCeEEEEEecC
Confidence 5554433333348899999999866554 45 78999999853
No 176
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.52 E-value=1.2e-11 Score=105.89 Aligned_cols=194 Identities=11% Similarity=0.000 Sum_probs=134.4
Q ss_pred eEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCEEEEEc----------CCCcEEEEeCCCCeeeEEeccc-------c
Q psy3337 98 NLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGG----------TDGHLRLWSFPKMKPLLHIEAH-------S 159 (297)
Q Consensus 98 ~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~----------~d~~i~iwd~~~~~~~~~~~~~-------~ 159 (297)
+|.+ |..+++.+..+..+ ..+ .++++|||++++.+. .++.|.+||..+++.+..+... .
T Consensus 48 ~v~v~D~~t~~~~~~i~~g-~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g 124 (373)
T 2mad_H 48 QQWVLDAGSGSILGHVNGG-FLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVG 124 (373)
T ss_pred EEEEEECCCCeEEEEecCC-CCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccC
Confidence 6777 99999988887633 333 899999999998875 3678999999988877766422 1
Q ss_pred CCeeEEEEccCCCEEEEEeC--CCcEEEEEcCCCceeee-eeccC----------------CCCc---------------
Q psy3337 160 KEIDDVDFSISGEQIVSIAK--DGKAFVWNSKNGSLSKE-LKWNT----------------PDNI--------------- 205 (297)
Q Consensus 160 ~~v~~~~~sp~~~~l~s~~~--d~~v~lwd~~~~~~~~~-~~~~~----------------~~~~--------------- 205 (297)
.....+.|+|||++|+.+.. ++.|.++| .+++.+.. +.... +++.
T Consensus 125 ~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~~~~~~~~~~~~~~~~~~dg~~~~vd~~g~~~~~~~ 203 (373)
T 2mad_H 125 PYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGL 203 (373)
T ss_pred CCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCceEEEEeCCCceEEEEcCCCCEEEEECCCcEEEEEe
Confidence 23458999999999998874 47899999 98887766 43210 0000
Q ss_pred ----------------------eEEEEe-----------------------------------eeeeeeeeCCCCeEEEE
Q psy3337 206 ----------------------KYLFKR-----------------------------------CRYGLVEDSPKRSRLFT 228 (297)
Q Consensus 206 ----------------------~~~~~~-----------------------------------~~~~~~~~s~~~~~l~~ 228 (297)
.+.+.. .....+.++|++..++.
T Consensus 204 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV 283 (373)
T 2mad_H 204 VGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYL 283 (373)
T ss_pred ccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEE
Confidence 000000 00011455666666665
Q ss_pred eccCccccc---CCCCeEEEEeCCCCceEEEeccCCCeEEEEEcCCCC-EEEEEecCCCeEEEEEeCCceec
Q psy3337 229 LANPLAQNK---RGISYVQQWDVDSGRLRLAREMKESLSALAVRDDGR-FVAVGTMFTGSVFVYIAFSLQMC 296 (297)
Q Consensus 229 ~~~~~~~~g---~~d~~i~~wd~~~~~~~~~~~~~~~v~~~~~s~dg~-~l~~~~~~dg~i~vwd~~~~~~~ 296 (297)
.... ...+ ...+.|.++|+.+++.+..+.......++.|+|||+ .++++...++.|.+||+.+++.+
T Consensus 284 ~~~~-~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv 354 (373)
T 2mad_H 284 LTSE-QSAWKLHAAAKEVTSVTGLVGQTSSQISLGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQD 354 (373)
T ss_pred Eecc-CCcccccCCCCeEEEEECCCCEEEEEEECCCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEE
Confidence 4320 0000 023589999999999999987766689999999999 67777622899999999998875
No 177
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.52 E-value=9.2e-13 Score=113.87 Aligned_cols=196 Identities=10% Similarity=0.048 Sum_probs=138.4
Q ss_pred ceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCEEEEEc----------CCCcEEEEeCCCCeeeEEeccc-------
Q psy3337 97 KNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGG----------TDGHLRLWSFPKMKPLLHIEAH------- 158 (297)
Q Consensus 97 ~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~----------~d~~i~iwd~~~~~~~~~~~~~------- 158 (297)
+.|.+ |..+++.+.++..+.. + .+.++|||++|+.+. .++.|.++|..+++.+..+.-.
T Consensus 99 ~~VsVID~~t~~vv~~I~vG~~-P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~ 175 (426)
T 3c75_H 99 TQQFVIDGSTGRILGMTDGGFL-P--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLV 175 (426)
T ss_dssp EEEEEEETTTTEEEEEEEECSS-C--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCB
T ss_pred CeEEEEECCCCEEEEEEECCCC-C--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCcccccc
Confidence 78888 9999999999885543 3 799999999887765 4678999999999988776421
Q ss_pred cCCeeEEEEccCCCEEEEEeC--CCcEEEEEcCCCceeeeeeccC----------------CCCceEEEEe---------
Q psy3337 159 SKEIDDVDFSISGEQIVSIAK--DGKAFVWNSKNGSLSKELKWNT----------------PDNIKYLFKR--------- 211 (297)
Q Consensus 159 ~~~v~~~~~sp~~~~l~s~~~--d~~v~lwd~~~~~~~~~~~~~~----------------~~~~~~~~~~--------- 211 (297)
......+.|+|||++|+++.. ++.|.+.|+.+++.+..+.... +++....+..
T Consensus 176 g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~ 255 (426)
T 3c75_H 176 GTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSLARVDFADGETKVTN 255 (426)
T ss_dssp SCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEE
T ss_pred CCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEe
Confidence 234568999999999998864 5789999999988766654310 0010000000
Q ss_pred ---------------------------------------------------------------eeeeeeeeCCCCeEEEE
Q psy3337 212 ---------------------------------------------------------------CRYGLVEDSPKRSRLFT 228 (297)
Q Consensus 212 ---------------------------------------------------------------~~~~~~~~s~~~~~l~~ 228 (297)
.....++++|++..++.
T Consensus 256 ~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyV 335 (426)
T 3c75_H 256 TEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYL 335 (426)
T ss_dssp CCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEE
T ss_pred eeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEE
Confidence 00001445555555554
Q ss_pred eccCcccccC---CCCeEEEEeCCCCceEEEeccCCCeEEEEEcCCCC-EEEEEecCCCeEEEEEeCCceec
Q psy3337 229 LANPLAQNKR---GISYVQQWDVDSGRLRLAREMKESLSALAVRDDGR-FVAVGTMFTGSVFVYIAFSLQMC 296 (297)
Q Consensus 229 ~~~~~~~~g~---~d~~i~~wd~~~~~~~~~~~~~~~v~~~~~s~dg~-~l~~~~~~dg~i~vwd~~~~~~~ 296 (297)
.... ...++ ..+.|.++|+.+.+.+..+.......++.|+|||+ ++++....++.|.++|+.+++.+
T Consensus 336 a~~~-~~~gthk~~s~~VsVID~~T~kvv~~I~vg~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv 406 (426)
T 3c75_H 336 LVDQ-RDEWKHKAASRFVVVLNAETGERINKIELGHEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEEL 406 (426)
T ss_dssp EEEE-CCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEE
T ss_pred Eecc-cccccccCCCCEEEEEECCCCeEEEEEECCCCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEE
Confidence 3210 00000 13579999999999999988766689999999999 88888843899999999998865
No 178
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.50 E-value=1.2e-12 Score=120.44 Aligned_cols=176 Identities=13% Similarity=-0.003 Sum_probs=121.4
Q ss_pred CceEEE-Eee--C-CCeEEEEecC-----CCCcEEEEEEecCCCEEEEEcCC----------CcEEEEeCCC------Ce
Q psy3337 96 EKNLRF-GFK--T-FDSVQTVFAG-----SESLQRVVRLSRNGDLMVTGGTD----------GHLRLWSFPK------MK 150 (297)
Q Consensus 96 d~~i~~-~~~--~-~~~~~~~~~~-----h~~~v~~~~~s~~g~~l~s~~~d----------~~i~iwd~~~------~~ 150 (297)
+..|++ +.. . +. ...+. . |...+..++|+|||+.|++++.+ ..|++||+.+ ++
T Consensus 101 ~~~l~~~~~~~~g~~~-~~~l~-~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 178 (662)
T 3azo_A 101 DQRLYAFEPDAPGGAV-PRPLT-PVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSA 178 (662)
T ss_dssp TCCEEEECTTSTTCCC-CEECS-CCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGG
T ss_pred CCeEEEEcCCCCCCCC-CEecc-CCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCc
Confidence 556666 554 2 43 44444 4 67788999999999999988876 5899999987 54
Q ss_pred eeEEec-cccCCeeEEEEccCCCEEEEEeCC--------CcEEEEEcC-CCc--eeeeee-ccCCCCceEEEEeeeeeee
Q psy3337 151 PLLHIE-AHSKEIDDVDFSISGEQIVSIAKD--------GKAFVWNSK-NGS--LSKELK-WNTPDNIKYLFKRCRYGLV 217 (297)
Q Consensus 151 ~~~~~~-~~~~~v~~~~~sp~~~~l~s~~~d--------~~v~lwd~~-~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~ 217 (297)
. ..+. .+...+..++|+|||++|+.++.+ ..|++||+. ++. ....+. .+. ..+..+
T Consensus 179 ~-~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~----------~~~~~~ 247 (662)
T 3azo_A 179 V-RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPE----------EAIAQA 247 (662)
T ss_dssp S-EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETT----------BCEEEE
T ss_pred e-eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCC----------ceEcce
Confidence 4 4555 566788899999999999987754 379999998 562 222222 211 123347
Q ss_pred eeCCCCeEEEEeccCcccccCCCC--eEEEEeCCCCceEEEeccCCC---------eEEEEEcCCCCEEEEEecCCCeEE
Q psy3337 218 EDSPKRSRLFTLANPLAQNKRGIS--YVQQWDVDSGRLRLAREMKES---------LSALAVRDDGRFVAVGTMFTGSVF 286 (297)
Q Consensus 218 ~~s~~~~~l~~~~~~~~~~g~~d~--~i~~wd~~~~~~~~~~~~~~~---------v~~~~~s~dg~~l~~~~~~dg~i~ 286 (297)
.|+|||+.+++.. .++ .|++||+.+++.......+.. +..++|+|++++++++.. +.++
T Consensus 248 ~~spdg~l~~~~~--------~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~--~~~~ 317 (662)
T 3azo_A 248 EWAPDGSLIVATD--------RTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK--GAAV 317 (662)
T ss_dssp EECTTSCEEEEEC--------TTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS--SSCE
T ss_pred EECCCCeEEEEEC--------CCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc--CccE
Confidence 7999999555533 355 788888877776655444322 457889999998888774 7777
Q ss_pred EE--EeCCce
Q psy3337 287 VY--IAFSLQ 294 (297)
Q Consensus 287 vw--d~~~~~ 294 (297)
|| |+.+++
T Consensus 318 l~~~d~~~~~ 327 (662)
T 3azo_A 318 LGILDPESGE 327 (662)
T ss_dssp EEEEETTTTE
T ss_pred EEEEECCCCc
Confidence 77 655443
No 179
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.50 E-value=9.5e-12 Score=102.89 Aligned_cols=172 Identities=12% Similarity=-0.005 Sum_probs=120.5
Q ss_pred EEEEecCCCCcEEEEEEecCCC-EEEEEcCCCcEEEEeCCCCeeeEEeccccCCeeEEEEccCCCEEEEEeCCCcEEEEE
Q psy3337 109 VQTVFAGSESLQRVVRLSRNGD-LMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAKDGKAFVWN 187 (297)
Q Consensus 109 ~~~~~~~h~~~v~~~~~s~~g~-~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~d~~v~lwd 187 (297)
+..+. .+.....+++|+|+|+ +++++..++.|..||..++ ...+..+...+.+++++|+++++++...++.|.+||
T Consensus 20 ~~~l~-~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d 96 (296)
T 3e5z_A 20 ARRLA-DGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQR 96 (296)
T ss_dssp CEEEE-CCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEEC
T ss_pred EEEEe-cCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEc
Confidence 44454 5566678999999998 7888888999999998876 566666777899999999999888777778999999
Q ss_pred cCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEecc----Cc-----ccccCCCCeEEEEeCCCCceEEEec
Q psy3337 188 SKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLAN----PL-----AQNKRGISYVQQWDVDSGRLRLARE 258 (297)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~----~~-----~~~g~~d~~i~~wd~~~~~~~~~~~ 258 (297)
..+++.......... ........++++|+|..+++... .. .......+.|..++.. ++......
T Consensus 97 ~~~g~~~~~~~~~~~------~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~ 169 (296)
T 3e5z_A 97 EPGGEWESIADSFEG------KKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIR 169 (296)
T ss_dssp STTCCEEEEECEETT------EECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEEC
T ss_pred CCCCcEEEEeeccCC------CCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeec
Confidence 988765433221110 01112345788999987776321 00 0000013467777766 55544443
Q ss_pred cCCCeEEEEEcCCCCEEEEEecCCCeEEEEEeC
Q psy3337 259 MKESLSALAVRDDGRFVAVGTMFTGSVFVYIAF 291 (297)
Q Consensus 259 ~~~~v~~~~~s~dg~~l~~~~~~dg~i~vwd~~ 291 (297)
....+..++|+|||+.|++.+. ++.|++|++.
T Consensus 170 ~~~~~~gi~~s~dg~~lv~~~~-~~~i~~~~~~ 201 (296)
T 3e5z_A 170 DRVKPNGLAFLPSGNLLVSDTG-DNATHRYCLN 201 (296)
T ss_dssp CCSSEEEEEECTTSCEEEEETT-TTEEEEEEEC
T ss_pred CCCCCccEEECCCCCEEEEeCC-CCeEEEEEEC
Confidence 3344899999999999977777 8999999986
No 180
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.49 E-value=1e-11 Score=104.41 Aligned_cols=180 Identities=14% Similarity=0.094 Sum_probs=123.0
Q ss_pred CCCCCceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCEEEEEcCC----CcEEEEeCCCCeeeEEec--cccCCeeE
Q psy3337 92 IDSKEKNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTD----GHLRLWSFPKMKPLLHIE--AHSKEIDD 164 (297)
Q Consensus 92 ~~~~d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d----~~i~iwd~~~~~~~~~~~--~~~~~v~~ 164 (297)
++..++.|.+ +..+++...... .+...+.+++|+|+|+++++...+ +.|.+||..++.....+. .+...+.+
T Consensus 61 ~~~~~~~i~~~d~~~~~~~~~~~-~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~ 139 (333)
T 2dg1_A 61 LDVFEGNIFKINPETKEIKRPFV-SHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDD 139 (333)
T ss_dssp EETTTCEEEEECTTTCCEEEEEE-CSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEE
T ss_pred EECCCCEEEEEeCCCCcEEEEee-CCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccc
Confidence 4556677887 777777655444 566789999999999988877666 689999988776543332 23457899
Q ss_pred EEEccCCCEEEEEeC------CCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccC
Q psy3337 165 VDFSISGEQIVSIAK------DGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKR 238 (297)
Q Consensus 165 ~~~sp~~~~l~s~~~------d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~ 238 (297)
++++|+++++++... .+.|..||..+++... +... ......++|+|+++.++.+. +
T Consensus 140 i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~----------~~~~~~i~~~~dg~~l~v~~-------~ 201 (333)
T 2dg1_A 140 MVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTP-IIQN----------ISVANGIALSTDEKVLWVTE-------T 201 (333)
T ss_dssp EEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEE-EEEE----------ESSEEEEEECTTSSEEEEEE-------G
T ss_pred eEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEE-eecC----------CCcccceEECCCCCEEEEEe-------C
Confidence 999999988877654 2456666655444322 2111 01123478999998766543 2
Q ss_pred CCCeEEEEeCCC-CceEEE--------eccCCCeEEEEEcCCCCEEEEEecCCCeEEEEEeC
Q psy3337 239 GISYVQQWDVDS-GRLRLA--------REMKESLSALAVRDDGRFVAVGTMFTGSVFVYIAF 291 (297)
Q Consensus 239 ~d~~i~~wd~~~-~~~~~~--------~~~~~~v~~~~~s~dg~~l~~~~~~dg~i~vwd~~ 291 (297)
.++.|.+||+.+ +..+.. +..+..+..++++++|+++++... ++.|.+||..
T Consensus 202 ~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~-~~~v~~~d~~ 262 (333)
T 2dg1_A 202 TANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYG-QGRVLVFNKR 262 (333)
T ss_dssp GGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEET-TTEEEEECTT
T ss_pred CCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcC-CCEEEEECCC
Confidence 367999999964 433221 122234889999999998888777 8999999974
No 181
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.49 E-value=1.1e-13 Score=118.80 Aligned_cols=182 Identities=12% Similarity=-0.008 Sum_probs=120.8
Q ss_pred CceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCeeeEEeccccCCeeE----------
Q psy3337 96 EKNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDD---------- 164 (297)
Q Consensus 96 d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~---------- 164 (297)
+..|++ ++.+++...... ++......+.|+|||++|+.++.++.|++||+.+++....+..+......
T Consensus 59 ~~~l~~~d~~~~~~~~l~~-~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~ 137 (396)
T 3c5m_A 59 NRNYYLLNLETQQAVQLTE-GKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCT 137 (396)
T ss_dssp SCEEEEEETTTTEEEECCC-SSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSS
T ss_pred CceEEEEECCCCcEEEeec-CCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCC
Confidence 346777 777776543332 33332334789999999999999999999999888765555434332222
Q ss_pred ---------EEEccCCCEEEEE-----eCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCC-CCeEEEEe
Q psy3337 165 ---------VDFSISGEQIVSI-----AKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSP-KRSRLFTL 229 (297)
Q Consensus 165 ---------~~~sp~~~~l~s~-----~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-~~~~l~~~ 229 (297)
+.|+|+++.++.. ..+..|++||+.+++...... +. ..+..+.|+| ++..|+.+
T Consensus 138 ~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~-~~----------~~~~~~~~sp~dg~~l~~~ 206 (396)
T 3c5m_A 138 KLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQ-DT----------AWLGHPIYRPFDDSTVGFC 206 (396)
T ss_dssp EEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEE-ES----------SCEEEEEEETTEEEEEEEE
T ss_pred ccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeecc-CC----------cccccceECCCCCCEEEEE
Confidence 3567777766544 356789999998876544332 11 1233477899 78877776
Q ss_pred ccCcccccCCC---CeEEEEeCCCCceEEEeccC-C-CeEEEEEcCCCCEEEEEecCC-----CeEEEEEeCCcee
Q psy3337 230 ANPLAQNKRGI---SYVQQWDVDSGRLRLAREMK-E-SLSALAVRDDGRFVAVGTMFT-----GSVFVYIAFSLQM 295 (297)
Q Consensus 230 ~~~~~~~g~~d---~~i~~wd~~~~~~~~~~~~~-~-~v~~~~~s~dg~~l~~~~~~d-----g~i~vwd~~~~~~ 295 (297)
.. +..+ ..|++||+..++........ . .+..++|+|||++|+.++. + +.|++||+.+++.
T Consensus 207 ~~-----~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~-~~~~~~~~l~~~d~~~g~~ 276 (396)
T 3c5m_A 207 HE-----GPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSY-FKGQTDRVIYKANPETLEN 276 (396)
T ss_dssp EC-----SCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECTTSSCEEEEEE-ETTTCCEEEEEECTTTCCE
T ss_pred ec-----CCCCCCCceEEEEECCCCceeEeeccCCCccccceEECCCCCEEEEEec-CCCCccceEEEEECCCCCe
Confidence 53 2211 57999999876654444422 2 2888999999998877765 4 4599999987753
No 182
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.48 E-value=1.8e-11 Score=100.34 Aligned_cols=163 Identities=12% Similarity=0.076 Sum_probs=123.8
Q ss_pred CCceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCEEEEEcC-CCcEEEEeCCCCeeeEEec------cccCCeeEEE
Q psy3337 95 KEKNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGT-DGHLRLWSFPKMKPLLHIE------AHSKEIDDVD 166 (297)
Q Consensus 95 ~d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~-d~~i~iwd~~~~~~~~~~~------~~~~~v~~~~ 166 (297)
.++.|+. +. +|+.+..+..+....+.++.+.|+|+++++.+. ++.|..+|. +++.+..+. .+......++
T Consensus 54 ~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~ 131 (276)
T 3no2_A 54 YSKGAKMITR-DGRELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQIN 131 (276)
T ss_dssp CBSEEEEECT-TSCEEEEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCE
T ss_pred CCCCEEEECC-CCCEEEEEcCCCCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCce
Confidence 3556766 77 899888887333457889999999999999877 778888885 677766654 2223456678
Q ss_pred EccCCCEEEEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEE
Q psy3337 167 FSISGEQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQW 246 (297)
Q Consensus 167 ~sp~~~~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~w 246 (297)
+.++|+++++...++.|.+||.. |+.+.++...... ..+...+++..+++.. .++.|..+
T Consensus 132 ~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~~~~-----------~~~~~~~~g~~~v~~~--------~~~~v~~~ 191 (276)
T 3no2_A 132 KNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLSGTP-----------FSSAFLDNGDCLVACG--------DAHCFVQL 191 (276)
T ss_dssp ECTTSCEEEEETTTTEEEEECTT-SCEEEEEECSSCC-----------CEEEECTTSCEEEECB--------TTSEEEEE
T ss_pred ECCCCCEEEEecCCCEEEEECCC-CCEEEEEECCCCc-----------cceeEcCCCCEEEEeC--------CCCeEEEE
Confidence 89999999999999999999987 9988888654211 1144578898888744 37789999
Q ss_pred eCCCCceEEEeccCC------C-eEEEEEcCCCCEEEEEe
Q psy3337 247 DVDSGRLRLAREMKE------S-LSALAVRDDGRFVAVGT 279 (297)
Q Consensus 247 d~~~~~~~~~~~~~~------~-v~~~~~s~dg~~l~~~~ 279 (297)
|..+|+.+..+.... . +.++...++|..+++..
T Consensus 192 d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 192 NLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp CTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred eCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEec
Confidence 999999988875321 1 78899999999988875
No 183
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.47 E-value=4.2e-13 Score=115.23 Aligned_cols=189 Identities=9% Similarity=-0.007 Sum_probs=122.8
Q ss_pred EEeeCCCeEEEEecCCCCc-----EEEEEEecCCCEEEEEcCC---CcEEEEeCCCCeeeEEeccccCCeeEEEEccCCC
Q psy3337 101 FGFKTFDSVQTVFAGSESL-----QRVVRLSRNGDLMVTGGTD---GHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGE 172 (297)
Q Consensus 101 ~~~~~~~~~~~~~~~h~~~-----v~~~~~s~~g~~l~s~~~d---~~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~ 172 (297)
++..++..+..+. .+... +..++|+|||++|+..... ..|.+||+.+++.......+......+.|+||++
T Consensus 15 ~d~~~g~~~~~l~-~~~~~~~~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~ 93 (396)
T 3c5m_A 15 VDSDTQVKVTRLT-PTDIICHRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDER 93 (396)
T ss_dssp ECTTTCCEEEECS-CTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSS
T ss_pred ecCCCCcceEEEe-cCCCCccceeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCC
Confidence 3667777777665 44332 6688999999998776443 4688899988876544333332333488999999
Q ss_pred EEEEEeCCCcEEEEEcCCCceeeeeeccCC---CCceEEEEee------eeeeeeeCCCCeEEEEeccCcccccCCCCeE
Q psy3337 173 QIVSIAKDGKAFVWNSKNGSLSKELKWNTP---DNIKYLFKRC------RYGLVEDSPKRSRLFTLANPLAQNKRGISYV 243 (297)
Q Consensus 173 ~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~---~~~~~~~~~~------~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i 243 (297)
+|+.++.++.|++||+.+++.......+.. .+..+.+... ....+.++|+++.++.... ..+..+..|
T Consensus 94 ~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~---~~~~~~~~l 170 (396)
T 3c5m_A 94 AFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEF---YHTNPTCRL 170 (396)
T ss_dssp EEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHH---HHTCCCEEE
T ss_pred EEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeee---ccCCCcceE
Confidence 999999999999999988876544443321 1000000000 0001356777776654320 001347799
Q ss_pred EEEeCCCCceEEEeccCCCeEEEEEcC-CCCEEEEEecCC------CeEEEEEeCCce
Q psy3337 244 QQWDVDSGRLRLAREMKESLSALAVRD-DGRFVAVGTMFT------GSVFVYIAFSLQ 294 (297)
Q Consensus 244 ~~wd~~~~~~~~~~~~~~~v~~~~~s~-dg~~l~~~~~~d------g~i~vwd~~~~~ 294 (297)
++||+.+++..........+..+.|+| ++..|+..+. + ..|.+||+.+++
T Consensus 171 ~~~d~~~g~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~-~~~~~~~~~l~~~d~~~~~ 227 (396)
T 3c5m_A 171 IKVDIETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHE-GPHDLVDARMWLVNEDGSN 227 (396)
T ss_dssp EEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEEC-SCSSSCSCCCEEEETTSCC
T ss_pred EEEECCCCcEEeeccCCcccccceECCCCCCEEEEEec-CCCCCCCceEEEEECCCCc
Confidence 999999888766665555599999999 8887776654 3 368889886653
No 184
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.47 E-value=2e-11 Score=102.70 Aligned_cols=186 Identities=8% Similarity=-0.001 Sum_probs=132.0
Q ss_pred CCCCCceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCeeeEEecccc-----CCeeEE
Q psy3337 92 IDSKEKNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHS-----KEIDDV 165 (297)
Q Consensus 92 ~~~~d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-----~~v~~~ 165 (297)
+...++.|.+ |..+++.+.++. . ......++++++++.+++...++.|.+||..+++....+.... .....+
T Consensus 59 ~~~~~~~v~viD~~t~~~~~~i~-~-~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i 136 (328)
T 3dsm_A 59 VVNNSHVIFAIDINTFKEVGRIT-G-FTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQM 136 (328)
T ss_dssp EEGGGTEEEEEETTTCCEEEEEE-C-CSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCE
T ss_pred EEcCCCEEEEEECcccEEEEEcC-C-CCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceE
Confidence 4445678888 999999988885 3 3456899999999655555589999999999998777665332 145677
Q ss_pred EEccCCCEEEEEe--CCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCc--ccccCCCC
Q psy3337 166 DFSISGEQIVSIA--KDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPL--AQNKRGIS 241 (297)
Q Consensus 166 ~~sp~~~~l~s~~--~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~--~~~g~~d~ 241 (297)
++ .+ ..|+.+. .++.|.+||+.+++.+..+.... ....+.++|+|+.+++..... ..-....+
T Consensus 137 ~~-~~-~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~-----------~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~ 203 (328)
T 3dsm_A 137 VQ-YG-KYVYVNCWSYQNRILKIDTETDKVVDELTIGI-----------QPTSLVMDKYNKMWTITDGGYEGSPYGYEAP 203 (328)
T ss_dssp EE-ET-TEEEEEECTTCCEEEEEETTTTEEEEEEECSS-----------CBCCCEECTTSEEEEEBCCBCTTCSSCBCCC
T ss_pred EE-EC-CEEEEEcCCCCCEEEEEECCCCeEEEEEEcCC-----------CccceEEcCCCCEEEEECCCccCCccccCCc
Confidence 77 34 4455444 48899999999998877665321 012367799998666643200 00000127
Q ss_pred eEEEEeCCCCceEEEeccC--CCeEEEEEcCCCCEEEEEecCCCeEEEEEeCCcee
Q psy3337 242 YVQQWDVDSGRLRLAREMK--ESLSALAVRDDGRFVAVGTMFTGSVFVYIAFSLQM 295 (297)
Q Consensus 242 ~i~~wd~~~~~~~~~~~~~--~~v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~~~~ 295 (297)
.|.+||..+++....+... ..+..++|+|++++|+++. . .|.+||+.+++.
T Consensus 204 ~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~--~-~v~~~d~~t~~~ 256 (328)
T 3dsm_A 204 SLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWIN--N-DIWRMPVEADRV 256 (328)
T ss_dssp EEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEES--S-SEEEEETTCSSC
T ss_pred eEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEc--c-EEEEEECCCCce
Confidence 8999999999888776543 2489999999999998865 3 899999988764
No 185
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.45 E-value=3.1e-11 Score=99.21 Aligned_cols=179 Identities=11% Similarity=0.108 Sum_probs=125.8
Q ss_pred CCCCCceEEE-EeeCCCeEEEEec-----CCCCcEEEEEEe-cCCCEEEEEcC-CCcEEEEeCCCCeeeEEecc-ccCCe
Q psy3337 92 IDSKEKNLRF-GFKTFDSVQTVFA-----GSESLQRVVRLS-RNGDLMVTGGT-DGHLRLWSFPKMKPLLHIEA-HSKEI 162 (297)
Q Consensus 92 ~~~~d~~i~~-~~~~~~~~~~~~~-----~h~~~v~~~~~s-~~g~~l~s~~~-d~~i~iwd~~~~~~~~~~~~-~~~~v 162 (297)
+...++.|.+ +.. ++.+..+.. ++...+..++++ ++++++++... ++.|.+|| .+++.+..+.. +...+
T Consensus 46 ~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d-~~g~~~~~~~~~~~~~~ 123 (286)
T 1q7f_A 46 ADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN-QYGQFVRKFGATILQHP 123 (286)
T ss_dssp EEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC-TTSCEEEEECTTTCSCE
T ss_pred EECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC-CCCcEEEEecCccCCCc
Confidence 4445667777 544 666555531 244578899995 67776666643 88999999 56776666642 34578
Q ss_pred eEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCe
Q psy3337 163 DDVDFSISGEQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISY 242 (297)
Q Consensus 163 ~~~~~sp~~~~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~ 242 (297)
.+++++|+++++++...++.|.+||. .++.+..+...... .....++++|++..+++... ++.
T Consensus 124 ~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~--------~~p~~i~~~~~g~l~v~~~~--------~~~ 186 (286)
T 1q7f_A 124 RGVTVDNKGRIIVVECKVMRVIIFDQ-NGNVLHKFGCSKHL--------EFPNGVVVNDKQEIFISDNR--------AHC 186 (286)
T ss_dssp EEEEECTTSCEEEEETTTTEEEEECT-TSCEEEEEECTTTC--------SSEEEEEECSSSEEEEEEGG--------GTE
T ss_pred eEEEEeCCCCEEEEECCCCEEEEEcC-CCCEEEEeCCCCcc--------CCcEEEEECCCCCEEEEECC--------CCE
Confidence 99999999998888778899999996 45555555321110 01234788999986666333 789
Q ss_pred EEEEeCCCCceEEEeccC---CCeEEEEEcCCCCEEEEEecCCC-eEEEEEeC
Q psy3337 243 VQQWDVDSGRLRLAREMK---ESLSALAVRDDGRFVAVGTMFTG-SVFVYIAF 291 (297)
Q Consensus 243 i~~wd~~~~~~~~~~~~~---~~v~~~~~s~dg~~l~~~~~~dg-~i~vwd~~ 291 (297)
|++||.. ++.+..+... ..+..++++++|+++++... ++ .|.+||..
T Consensus 187 i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~-~~~~i~~~~~~ 237 (286)
T 1q7f_A 187 VKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNH-NNFNLTIFTQD 237 (286)
T ss_dssp EEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECS-SSCEEEEECTT
T ss_pred EEEEcCC-CCEEEEEccCCccCCCcEEEECCCCCEEEEeCC-CCEEEEEECCC
Confidence 9999985 6666666544 34899999999998888877 76 99999954
No 186
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.43 E-value=1.3e-11 Score=104.12 Aligned_cols=163 Identities=11% Similarity=0.201 Sum_probs=108.7
Q ss_pred CCceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCEEEEEcCC---C--cEEEEeCCCCeeeEEeccccCCeeEEEEc
Q psy3337 95 KEKNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTD---G--HLRLWSFPKMKPLLHIEAHSKEIDDVDFS 168 (297)
Q Consensus 95 ~d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d---~--~i~iwd~~~~~~~~~~~~~~~~v~~~~~s 168 (297)
.+..|++ ++.+++.. .+ ..+..++|||||++|+..+.+ + .|.+||+.+++....... .. +..++|+
T Consensus 41 ~~~~l~~~d~~~~~~~-~l-----~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~-~~-~~~~~ws 112 (347)
T 2gop_A 41 YENTIVIENLKNNARR-FI-----ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEA-KN-IRSLEWN 112 (347)
T ss_dssp EEEEEEEEETTTCCEE-EE-----ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEE-SE-EEEEEEC
T ss_pred ccceEEEEeCCCCceE-Ec-----ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcC-CC-ccceeEC
Confidence 3567777 77777643 23 357789999999999887654 2 488889888776554443 33 9999999
Q ss_pred cCCCEEEEEeCC---------------------------CcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCC
Q psy3337 169 ISGEQIVSIAKD---------------------------GKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSP 221 (297)
Q Consensus 169 p~~~~l~s~~~d---------------------------~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 221 (297)
||++.|+.++.+ ..|++||+.+++.+..+... .+..+.|+|
T Consensus 113 pdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~~------------~~~~~~~sp 180 (347)
T 2gop_A 113 EDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEKP------------RFSSGIWHR 180 (347)
T ss_dssp TTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEEE------------TTCEEEEET
T ss_pred CCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecCC------------CcccccCCC
Confidence 999988887632 56889999887663444321 233467899
Q ss_pred CCeEEEEeccCcccccC-----C-CCeEEEEeCCCCceEEEeccCCCeEEEEEcCCCCEEEEEecCC--------CeEEE
Q psy3337 222 KRSRLFTLANPLAQNKR-----G-ISYVQQWDVDSGRLRLAREMKESLSALAVRDDGRFVAVGTMFT--------GSVFV 287 (297)
Q Consensus 222 ~~~~l~~~~~~~~~~g~-----~-d~~i~~wd~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~d--------g~i~v 287 (297)
+| .+++... .. . ...|+++| +++....... ..+..+ +|||++|+.++. + ..|.+
T Consensus 181 dg-~~~~~~~-----~~~~~~~~~~~~l~~~d--~~~~~~l~~~-~~~~~~--spdg~~l~~~~~-~~~~~~~~~~~l~~ 248 (347)
T 2gop_A 181 DK-IVVNVPH-----REIIPQYFKFWDIYIWE--DGKEEKMFEK-VSFYAV--DSDGERILLYGK-PEKKYMSEHNKLYI 248 (347)
T ss_dssp TE-EEEEEEC-----CCSSCCSSCCEEEEEEE--TTEEEEEEEE-ESEEEE--EECSSCEEEEEC-CSSSCCCSSCEEEE
T ss_pred Ce-EEEEEec-----ccccccccccccEEEeC--CCceEEeccC-cceeeE--CCCCCEEEEEEc-cccCCccccceEEE
Confidence 99 6665432 11 1 23566666 5554443333 335544 999999887775 4 36888
Q ss_pred EE
Q psy3337 288 YI 289 (297)
Q Consensus 288 wd 289 (297)
||
T Consensus 249 ~d 250 (347)
T 2gop_A 249 YD 250 (347)
T ss_dssp EC
T ss_pred EC
Confidence 87
No 187
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.43 E-value=6.6e-12 Score=116.53 Aligned_cols=167 Identities=12% Similarity=0.059 Sum_probs=113.3
Q ss_pred CCCCcEEEEEEecCCCEEEEEcCCC-----cEEEEeCCCCeeeEEeccccCCeeEEEEccCCCEEEEEeCCCc-------
Q psy3337 115 GSESLQRVVRLSRNGDLMVTGGTDG-----HLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAKDGK------- 182 (297)
Q Consensus 115 ~h~~~v~~~~~s~~g~~l~s~~~d~-----~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~d~~------- 182 (297)
+|...+..++|||||++|+.+..++ .|++||+.+++.+.....+ ..+..++|+|||+.|+.++.++.
T Consensus 122 ~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~ 200 (710)
T 2xdw_A 122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGT 200 (710)
T ss_dssp TSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSS
T ss_pred CCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-cccceEEEEeCCCEEEEEEECCcccccccc
Confidence 3445688999999999998765433 8999999999876533322 23678999999999999888766
Q ss_pred ---------EEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCC-CCeEEEEeCCC--
Q psy3337 183 ---------AFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRG-ISYVQQWDVDS-- 250 (297)
Q Consensus 183 ---------v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~-d~~i~~wd~~~-- 250 (297)
|++|++.+++....+....+....+. ..+.|+|||++|+.... .+.. +..|++||+.+
T Consensus 201 ~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~------~~~~~SpDg~~l~~~~~----~~~~~~~~l~~~d~~~~~ 270 (710)
T 2xdw_A 201 ETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWM------GGAELSDDGRYVLLSIR----EGCDPVNRLWYCDLQQES 270 (710)
T ss_dssp CCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCE------EEEEECTTSCEEEEEEE----CSSSSCCEEEEEEGGGSS
T ss_pred ccccCCCCEEEEEECCCCcccceEEeccCCCCeEE------EEEEEcCCCCEEEEEEE----ccCCCccEEEEEECcccc
Confidence 99999987763212211111110111 23678999999888653 1222 67899999986
Q ss_pred ----Cc-eEEEeccCCC-eEEEEEcCCCCEEEEEecCC---CeEEEEEeCCc
Q psy3337 251 ----GR-LRLAREMKES-LSALAVRDDGRFVAVGTMFT---GSVFVYIAFSL 293 (297)
Q Consensus 251 ----~~-~~~~~~~~~~-v~~~~~s~dg~~l~~~~~~d---g~i~vwd~~~~ 293 (297)
+. ....+..+.. +.. .|+|+|..|+..+..+ +.|.+||+.++
T Consensus 271 ~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~ 321 (710)
T 2xdw_A 271 NGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDP 321 (710)
T ss_dssp SSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSC
T ss_pred cccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCC
Confidence 42 3444444433 444 5889999887766512 36999998875
No 188
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.42 E-value=2.4e-11 Score=102.26 Aligned_cols=189 Identities=10% Similarity=0.042 Sum_probs=132.1
Q ss_pred CCCCCceEEE-EeeCCCeEEEEec-----CCCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCeeeEEeccccCCeeEE
Q psy3337 92 IDSKEKNLRF-GFKTFDSVQTVFA-----GSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDV 165 (297)
Q Consensus 92 ~~~~d~~i~~-~~~~~~~~~~~~~-----~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~ 165 (297)
-++.+++|.+ |..+++....+.. ........+.+. +++.+++...++.|.+||..+++.+.++. .......+
T Consensus 12 ~g~~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~-~~~~p~~i 89 (328)
T 3dsm_A 12 FQYSNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRIT-GFTSPRYI 89 (328)
T ss_dssp TTSCCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEE-CCSSEEEE
T ss_pred CCCCCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcC-CCCCCcEE
Confidence 3556889999 9999887665421 122345677774 45566666778999999999999888885 34578899
Q ss_pred EEccCCCEEEEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEE
Q psy3337 166 DFSISGEQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQ 245 (297)
Q Consensus 166 ~~sp~~~~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~ 245 (297)
+++++++.+++...++.|.+||+.+++....+......+.. .....+++ ++..++.+.. ..++.|.+
T Consensus 90 ~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~-----~~p~~i~~--~~~~lyv~~~------~~~~~v~v 156 (328)
T 3dsm_A 90 HFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMES-----GSTEQMVQ--YGKYVYVNCW------SYQNRILK 156 (328)
T ss_dssp EEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTT-----CBCCCEEE--ETTEEEEEEC------TTCCEEEE
T ss_pred EEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccC-----CCcceEEE--ECCEEEEEcC------CCCCEEEE
Confidence 99999855445448899999999998877666532200000 00011344 3344444321 13789999
Q ss_pred EeCCCCceEEEeccCCCeEEEEEcCCCCEEEEEecCC----------CeEEEEEeCCceec
Q psy3337 246 WDVDSGRLRLAREMKESLSALAVRDDGRFVAVGTMFT----------GSVFVYIAFSLQMC 296 (297)
Q Consensus 246 wd~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~d----------g~i~vwd~~~~~~~ 296 (297)
||+.+++.+..+........+.++|+|++++++.. + +.|.+||..+++.+
T Consensus 157 iD~~t~~~~~~i~~g~~p~~i~~~~dG~l~v~~~~-~~~~~~~~~~~~~v~~id~~t~~v~ 216 (328)
T 3dsm_A 157 IDTETDKVVDELTIGIQPTSLVMDKYNKMWTITDG-GYEGSPYGYEAPSLYRIDAETFTVE 216 (328)
T ss_dssp EETTTTEEEEEEECSSCBCCCEECTTSEEEEEBCC-BCTTCSSCBCCCEEEEEETTTTEEE
T ss_pred EECCCCeEEEEEEcCCCccceEEcCCCCEEEEECC-CccCCccccCCceEEEEECCCCeEE
Confidence 99999998888876555788999999997777765 5 78999999887653
No 189
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.42 E-value=1.6e-11 Score=113.93 Aligned_cols=185 Identities=10% Similarity=0.018 Sum_probs=125.9
Q ss_pred CCCCceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCEEEEEcCCCc----------------EEEEeCCCCee----
Q psy3337 93 DSKEKNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGH----------------LRLWSFPKMKP---- 151 (297)
Q Consensus 93 ~~~d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~----------------i~iwd~~~~~~---- 151 (297)
++...+|++ ++.+++.+.... .+. .+..++|+|||+.|+.++.++. |++|++.++..
T Consensus 147 G~~~~~i~v~d~~tg~~~~~~~-~~~-~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~ 224 (710)
T 2xdw_A 147 GSDWVTIKFMKVDGAKELPDVL-ERV-KFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDIL 224 (710)
T ss_dssp TCSCEEEEEEETTTTEEEEEEE-EEE-CSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEE
T ss_pred CCceEEEEEEECCCCCCCcccc-cCc-ccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceE
Confidence 333448999 999988776443 222 2568999999999999888766 99999987652
Q ss_pred eEEeccccCCeeEEEEccCCCEEEEEeC-----CCcEEEEEcCC------Cc-eeeeeeccCCCCceEEEEeeeeeeeee
Q psy3337 152 LLHIEAHSKEIDDVDFSISGEQIVSIAK-----DGKAFVWNSKN------GS-LSKELKWNTPDNIKYLFKRCRYGLVED 219 (297)
Q Consensus 152 ~~~~~~~~~~v~~~~~sp~~~~l~s~~~-----d~~v~lwd~~~------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (297)
+.....|...+..+.|+|||++|+..+. +..|++||+.+ +. ....+..+.... . ..|
T Consensus 225 v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~--~---------~~~ 293 (710)
T 2xdw_A 225 CAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGE--Y---------DYV 293 (710)
T ss_dssp EECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSC--E---------EEE
T ss_pred EeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcE--E---------EEE
Confidence 2222334556889999999999887764 56899999976 43 344444332111 0 125
Q ss_pred CCCCeEEEEeccCcccccCCCCeEEEEeCCCCc---eEEEeccCC--CeEEEEEcCCCCEEEEEecCCCe--EEEEEeCC
Q psy3337 220 SPKRSRLFTLANPLAQNKRGISYVQQWDVDSGR---LRLAREMKE--SLSALAVRDDGRFVAVGTMFTGS--VFVYIAFS 292 (297)
Q Consensus 220 s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~---~~~~~~~~~--~v~~~~~s~dg~~l~~~~~~dg~--i~vwd~~~ 292 (297)
+|+|..|+..+. .+.....|.+||+.++. ....+.... .+..++|++++.++++... ++. |++||+.+
T Consensus 294 s~dg~~l~~~s~----~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~-~g~~~l~~~~~~~ 368 (710)
T 2xdw_A 294 TNEGTVFTFKTN----RHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLH-DVKNTLQLHDLAT 368 (710)
T ss_dssp EEETTEEEEEEC----TTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEE-TTEEEEEEEETTT
T ss_pred eccCCEEEEEEC----CCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEE-CCEEEEEEEECCC
Confidence 788888877654 12235689999998764 233344434 3888999988888888888 874 56677756
Q ss_pred cee
Q psy3337 293 LQM 295 (297)
Q Consensus 293 ~~~ 295 (297)
++.
T Consensus 369 g~~ 371 (710)
T 2xdw_A 369 GAL 371 (710)
T ss_dssp CCE
T ss_pred CCE
Confidence 653
No 190
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.41 E-value=1.5e-11 Score=103.84 Aligned_cols=171 Identities=8% Similarity=0.082 Sum_probs=113.0
Q ss_pred eEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCEEEEEcCC---------------------------CcEEEEeCCCC
Q psy3337 98 NLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTD---------------------------GHLRLWSFPKM 149 (297)
Q Consensus 98 ~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d---------------------------~~i~iwd~~~~ 149 (297)
.|++ ++.+++...... .+ . +..++|+|||+.|+.++.+ ..|++||+.++
T Consensus 86 ~l~~~~~~~g~~~~l~~-~~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~ 162 (347)
T 2gop_A 86 EIWVADLETLSSKKILE-AK-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESE 162 (347)
T ss_dssp EEEEEETTTTEEEEEEE-ES-E-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTT
T ss_pred eEEEEECCCCceEEEEc-CC-C-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCC
Confidence 4666 777776555443 33 3 8999999999988887632 57999999888
Q ss_pred eeeEEeccccCCeeEEEEccCCCEEEEEeCCC-------cEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCC
Q psy3337 150 KPLLHIEAHSKEIDDVDFSISGEQIVSIAKDG-------KAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPK 222 (297)
Q Consensus 150 ~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~d~-------~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 222 (297)
+.+..+.. . .+..+.|+|++ +++++..+. ...||.+.+++. ..+..+ ..+ ..++|+
T Consensus 163 ~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~-~~l~~~-----------~~~--~~~spd 225 (347)
T 2gop_A 163 EVIEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKE-EKMFEK-----------VSF--YAVDSD 225 (347)
T ss_dssp EEEEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEE-EEEEEE-----------ESE--EEEEEC
T ss_pred eEEeeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCce-EEeccC-----------cce--eeECCC
Confidence 76455554 3 78899999999 777776542 344554434432 333211 111 123899
Q ss_pred CeEEEEeccCcccccCCCCeEEEEeCCCCceEEEeccCCC-eEE-EEEcCCCCEEEEEecCCCeEEEEEeCCce
Q psy3337 223 RSRLFTLANPLAQNKRGISYVQQWDVDSGRLRLAREMKES-LSA-LAVRDDGRFVAVGTMFTGSVFVYIAFSLQ 294 (297)
Q Consensus 223 ~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~-v~~-~~~s~dg~~l~~~~~~dg~i~vwd~~~~~ 294 (297)
|+.|+..+............|++|| +++.......+.. +.. +.|+ || ++++++. ++.++|| +.+++
T Consensus 226 g~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~-~~~~~l~-~~~g~ 293 (347)
T 2gop_A 226 GERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK-VYFTLFE-EGSVNLY-IWDGE 293 (347)
T ss_dssp SSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE-EEEEEEE-TTEEEEE-EESSS
T ss_pred CCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc-EEEEEec-CCcEEEE-EcCCc
Confidence 9988876541000001235799999 6666555555544 776 9999 88 8888888 9999999 86544
No 191
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.41 E-value=6.1e-11 Score=97.99 Aligned_cols=178 Identities=13% Similarity=-0.000 Sum_probs=118.8
Q ss_pred CCCCceEEE-EeeCCCeEEEEe--cC-CCCcEEEEEEecCCCEEEE----Ec-------------CCCcEEEEeCCCCee
Q psy3337 93 DSKEKNLRF-GFKTFDSVQTVF--AG-SESLQRVVRLSRNGDLMVT----GG-------------TDGHLRLWSFPKMKP 151 (297)
Q Consensus 93 ~~~d~~i~~-~~~~~~~~~~~~--~~-h~~~v~~~~~s~~g~~l~s----~~-------------~d~~i~iwd~~~~~~ 151 (297)
...++.|.+ +..+++...... .+ ....+..++++|+|+++++ |. ..+.|..++.. ++
T Consensus 86 ~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~- 163 (296)
T 3e5z_A 86 SHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT- 163 (296)
T ss_dssp ETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC-
T ss_pred ecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CC-
Confidence 334456766 776777543322 01 1224567999999998887 33 13456666654 44
Q ss_pred eEEeccccCCeeEEEEccCCCEEEEEeCCCcEEEEEcC-CCce---eeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEE
Q psy3337 152 LLHIEAHSKEIDDVDFSISGEQIVSIAKDGKAFVWNSK-NGSL---SKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLF 227 (297)
Q Consensus 152 ~~~~~~~~~~v~~~~~sp~~~~l~s~~~d~~v~lwd~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~ 227 (297)
+..+..+......++|+|+++.|++.+.++.|.+||+. ++.. ...+..+. .....++++++|..++
T Consensus 164 ~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~----------~~p~~i~~d~~G~l~v 233 (296)
T 3e5z_A 164 LSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEP----------GKTDGLRVDAGGLIWA 233 (296)
T ss_dssp EEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSS----------SCCCSEEEBTTSCEEE
T ss_pred EEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCC----------CCCCeEEECCCCCEEE
Confidence 34445566678999999999988777778999999987 4543 22221110 0112377899998665
Q ss_pred EeccCcccccCCCCeEEEEeCCCCceEEEeccCCCeEEEEE-cCCCCEEEEEecCCCeEEEEEeCCcee
Q psy3337 228 TLANPLAQNKRGISYVQQWDVDSGRLRLAREMKESLSALAV-RDDGRFVAVGTMFTGSVFVYIAFSLQM 295 (297)
Q Consensus 228 ~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~v~~~~~-s~dg~~l~~~~~~dg~i~vwd~~~~~~ 295 (297)
+. ++.|.+||.. ++.+..+..+..+.+++| +|+++.|++++. + .+..++..+.+.
T Consensus 234 ~~----------~~~v~~~~~~-g~~~~~~~~~~~~~~~~f~~~d~~~L~v~t~-~-~l~~~~~~~~~~ 289 (296)
T 3e5z_A 234 SA----------GDGVHVLTPD-GDELGRVLTPQTTSNLCFGGPEGRTLYMTVS-T-EFWSIETNVRGL 289 (296)
T ss_dssp EE----------TTEEEEECTT-SCEEEEEECSSCCCEEEEESTTSCEEEEEET-T-EEEEEECSCCBC
T ss_pred Ec----------CCeEEEECCC-CCEEEEEECCCCceeEEEECCCCCEEEEEcC-C-eEEEEEcccccc
Confidence 52 5789999987 777777776555889999 689999999986 5 566667766543
No 192
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.41 E-value=2.7e-11 Score=103.03 Aligned_cols=198 Identities=10% Similarity=0.025 Sum_probs=132.3
Q ss_pred CceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCEEEEEc----------CCCcEEEEeCCCCeeeEEeccc------
Q psy3337 96 EKNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGG----------TDGHLRLWSFPKMKPLLHIEAH------ 158 (297)
Q Consensus 96 d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~----------~d~~i~iwd~~~~~~~~~~~~~------ 158 (297)
++.|.+ |..+++.+.++..+.. + . ++++|||++++.+. .++.|.+||..+++.+..+.-.
T Consensus 58 ~~~V~ViD~~t~~v~~~I~vG~~-P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~ 134 (386)
T 3sjl_D 58 VTQQFVIDGEAGRVIGMIDGGFL-P-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFL 134 (386)
T ss_dssp SEEEEEEETTTTEEEEEEEECSS-C-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCC
T ss_pred CCEEEEEECCCCeEEEEEECCCC-C-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccc
Confidence 678888 9999999988884544 3 3 99999999887765 3678999999999988877432
Q ss_pred -cCCeeEEEEccCCCEEEEEeC--CCcEEEEEcCCCceeeeeeccC----------------CCCceEEEEee---e---
Q psy3337 159 -SKEIDDVDFSISGEQIVSIAK--DGKAFVWNSKNGSLSKELKWNT----------------PDNIKYLFKRC---R--- 213 (297)
Q Consensus 159 -~~~v~~~~~sp~~~~l~s~~~--d~~v~lwd~~~~~~~~~~~~~~----------------~~~~~~~~~~~---~--- 213 (297)
......+.|+|||++++++.. ++.|.++|+.+++.+.++.... +++....+... .
T Consensus 135 ~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~ 214 (386)
T 3sjl_D 135 VGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEI 214 (386)
T ss_dssp BSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSCEEEEECCSSSCCEE
T ss_pred cCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCcceeecCCCceeEEECCCCCEEEEECCCCCeEEE
Confidence 124668999999999888864 6899999999988776664211 11111111000 0
Q ss_pred -----e--------eeeee-CCCCeEEEEeccC-----------------------------------------------
Q psy3337 214 -----Y--------GLVED-SPKRSRLFTLANP----------------------------------------------- 232 (297)
Q Consensus 214 -----~--------~~~~~-s~~~~~l~~~~~~----------------------------------------------- 232 (297)
+ ...+| .++|++++.....
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~l 294 (386)
T 3sjl_D 215 THTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRI 294 (386)
T ss_dssp EECCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEE
T ss_pred eecceeccccccccccceeEcCCCcEEEEeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeE
Confidence 0 00122 1344332211110
Q ss_pred ccccc-----C---CCCeEEEEeCCCCceEEEeccCCCeEEEEEcCCCC-EEEEEecCCCeEEEEEeCCceec
Q psy3337 233 LAQNK-----R---GISYVQQWDVDSGRLRLAREMKESLSALAVRDDGR-FVAVGTMFTGSVFVYIAFSLQMC 296 (297)
Q Consensus 233 ~~~~g-----~---~d~~i~~wd~~~~~~~~~~~~~~~v~~~~~s~dg~-~l~~~~~~dg~i~vwd~~~~~~~ 296 (297)
++... + ....|.++|+.+++.+..+.....+.++.+++|++ +|++....++.|.++|..+++.+
T Consensus 295 yV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~ 367 (386)
T 3sjl_D 295 YLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEEL 367 (386)
T ss_dssp EEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEE
T ss_pred EEEeccccccccCCCCCEEEEEECCCCeEEEEEECCCCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEE
Confidence 00000 0 12468888888888888887766688999999997 66665543899999999999875
No 193
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.40 E-value=2.2e-11 Score=103.87 Aligned_cols=133 Identities=13% Similarity=0.118 Sum_probs=103.2
Q ss_pred CCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCeeeEEeccccCCeeEEEEccCCCEEEEEeCCCcEEEEEcCCCceee
Q psy3337 116 SESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAKDGKAFVWNSKNGSLSK 195 (297)
Q Consensus 116 h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~d~~v~lwd~~~~~~~~ 195 (297)
+.. |+.++| |+++|+++ .++.|++||+.+.........|...+.++.+.+. .+++++.||.|.+||+.++....
T Consensus 87 lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~ 160 (388)
T 1xip_A 87 IPD-VIFVCF--HGDQVLVS-TRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ 160 (388)
T ss_dssp CTT-EEEEEE--ETTEEEEE-ESSEEEEEESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE
T ss_pred CCC-eeEEEE--CCCEEEEE-cCCcEEEEEchhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc
Confidence 445 899999 89999999 8899999999877666666677888988887765 38888999999999998776542
Q ss_pred eeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCCCce--EEEe------c---cCCC-e
Q psy3337 196 ELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSGRL--RLAR------E---MKES-L 263 (297)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~--~~~~------~---~~~~-v 263 (297)
+ ...+.+++|+|+| ++. |..|+.+++|+...+++ ...+ . .+.. |
T Consensus 161 -~-------------~~~Vs~v~WSpkG--~~v--------g~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V 216 (388)
T 1xip_A 161 -L-------------AQNVTSFDVTNSQ--LAV--------LLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSP 216 (388)
T ss_dssp -E-------------EESEEEEEECSSE--EEE--------EETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEE
T ss_pred -c-------------cCCceEEEEcCCc--eEE--------EEcCCcEEEEcCCCccccccceecCCcccccccCCCeeE
Confidence 1 1234568999999 344 34489999999987775 5555 2 2334 9
Q ss_pred EEEEEcCCCCEEEEE
Q psy3337 264 SALAVRDDGRFVAVG 278 (297)
Q Consensus 264 ~~~~~s~dg~~l~~~ 278 (297)
.+++|.+++.++++=
T Consensus 217 ~sI~wl~~~~flv~y 231 (388)
T 1xip_A 217 LSVTILSPQDFLAVF 231 (388)
T ss_dssp EEEEESSSSEEEEEE
T ss_pred EEEEEecCCeEEEEE
Confidence 999999999998863
No 194
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.38 E-value=9.4e-12 Score=115.23 Aligned_cols=166 Identities=8% Similarity=-0.079 Sum_probs=109.5
Q ss_pred CCCCcEEEEEEecCCCEEE-----EEcCCCcEEEEeCCCCeeeEEeccccCCe--eEEEEccCCCEEEEEeCCCc-----
Q psy3337 115 GSESLQRVVRLSRNGDLMV-----TGGTDGHLRLWSFPKMKPLLHIEAHSKEI--DDVDFSISGEQIVSIAKDGK----- 182 (297)
Q Consensus 115 ~h~~~v~~~~~s~~g~~l~-----s~~~d~~i~iwd~~~~~~~~~~~~~~~~v--~~~~~sp~~~~l~s~~~d~~----- 182 (297)
+|...+..++|||||++|| .|+.+..|++||+.+++.+. ..+...+ ..++|+|||+.|+.++.|..
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~--~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~ 195 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK--VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKV 195 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS--SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCG
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcC--CcccCcccccceEEecCCCEEEEEEecCCCCCcc
Confidence 4555789999999999998 44456789999999988641 1122222 68999999999999988776
Q ss_pred --------EEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccC-CCCeEEEEeCCCCce
Q psy3337 183 --------AFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKR-GISYVQQWDVDSGRL 253 (297)
Q Consensus 183 --------v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~-~d~~i~~wd~~~~~~ 253 (297)
|++|++.++.....+....+..... +..+.|+|||++|+.... .. ....|++|+..+++.
T Consensus 196 ~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~------~~~~~~SpDG~~l~~~~~-----~~~~~~~l~~~~~~~~~~ 264 (695)
T 2bkl_A 196 DERPGYTTIRYHTLGTEPSKDTVVHERTGDPTT------FLQSDLSRDGKYLFVYIL-----RGWSENDVYWKRPGEKDF 264 (695)
T ss_dssp GGGGGGCEEEEEETTSCGGGCEEEECCCCCTTC------EEEEEECTTSCCEEEEEE-----ETTTEEEEEEECTTCSSC
T ss_pred ccCCCCCEEEEEECCCCchhceEEEecCCCCEE------EEEEEECCCCCEEEEEEe-----CCCCceEEEEEcCCCCce
Confidence 9999998776321111111111011 224678999999888654 11 234788888776665
Q ss_pred EEEeccCCCeEEEEEcCCCCEEEEEec--CCCeEEEEEeCCce
Q psy3337 254 RLAREMKESLSALAVRDDGRFVAVGTM--FTGSVFVYIAFSLQ 294 (297)
Q Consensus 254 ~~~~~~~~~v~~~~~s~dg~~l~~~~~--~dg~i~vwd~~~~~ 294 (297)
.........+....+ ++|.+++.+.. .++.|.+||+.+++
T Consensus 265 ~~l~~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~ 306 (695)
T 2bkl_A 265 RLLVKGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPA 306 (695)
T ss_dssp EEEEECSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCS
T ss_pred EEeecCCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCC
Confidence 544444444666666 66664444432 15789999987754
No 195
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.36 E-value=2.3e-11 Score=103.43 Aligned_cols=189 Identities=10% Similarity=-0.021 Sum_probs=130.8
Q ss_pred eEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCEEEEEc----------CCCcEEEEeCCCCeeeEEeccc-------c
Q psy3337 98 NLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGG----------TDGHLRLWSFPKMKPLLHIEAH-------S 159 (297)
Q Consensus 98 ~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~----------~d~~i~iwd~~~~~~~~~~~~~-------~ 159 (297)
++.+ |..+++.+.++..+.. + .+.++||+++++.+. .++.|.+||+.+++.+.++... .
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~-P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g 123 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFL-S--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVG 123 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTT-C--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBS
T ss_pred eEEEEECCCCeEEEEEeCCCC-C--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccC
Confidence 7778 9999999999985654 4 799999999888775 3688999999999998888643 1
Q ss_pred CCeeEEEEccCCCEEEEEeC--CCcEEE--EEcCCCceeeeeecc----------------CCC----------------
Q psy3337 160 KEIDDVDFSISGEQIVSIAK--DGKAFV--WNSKNGSLSKELKWN----------------TPD---------------- 203 (297)
Q Consensus 160 ~~v~~~~~sp~~~~l~s~~~--d~~v~l--wd~~~~~~~~~~~~~----------------~~~---------------- 203 (297)
.....++|+|||++++++.. +..+.+ +|+.+ +..+... .++
T Consensus 124 ~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~ 200 (368)
T 1mda_H 124 PRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAG 200 (368)
T ss_dssp CCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCE
T ss_pred CCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccccCC
Confidence 34678999999999998864 456888 88754 1111000 000
Q ss_pred ---------------------CceEE---------EEe-------------------------eeeeeeeeCCCCeEEEE
Q psy3337 204 ---------------------NIKYL---------FKR-------------------------CRYGLVEDSPKRSRLFT 228 (297)
Q Consensus 204 ---------------------~~~~~---------~~~-------------------------~~~~~~~~s~~~~~l~~ 228 (297)
...+. +.. .....++++|+++.++.
T Consensus 201 ~v~~~~t~~i~vg~~P~~~~~~~~~~~vs~~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV 280 (368)
T 1mda_H 201 IVGAQCTGAQNCSSQAAQANYPGMLVWAVASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMI 280 (368)
T ss_dssp ECCCCSCTTSCBCSCCEEETTTTEEEECBSSCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEE
T ss_pred eEEEEeeeeeeCCCCccccccCCEEEEEcCCEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEE
Confidence 00000 000 00011567888887776
Q ss_pred eccC----cccccCCCCeEEEEeCCCCceEEEeccCCCeEEEEEcCCCCE-EEEEe-cCCCeEEEEEeCCceec
Q psy3337 229 LANP----LAQNKRGISYVQQWDVDSGRLRLAREMKESLSALAVRDDGRF-VAVGT-MFTGSVFVYIAFSLQMC 296 (297)
Q Consensus 229 ~~~~----~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~v~~~~~s~dg~~-l~~~~-~~dg~i~vwd~~~~~~~ 296 (297)
...+ .+. . ...+.++|+.+++.+..+........++|+|||++ +++.. . ++.|.++|+.+++.+
T Consensus 281 ~~~~~~~~~~~--~-~~~~~ViD~~t~~vv~~i~vg~~p~gi~~s~Dg~~l~va~~~~-~~~VsVID~~t~kvv 350 (368)
T 1mda_H 281 LTVEHSRSCLA--A-AENTSSVTASVGQTSGPISNGHDSDAIIAAQDGASDNYANSAG-TEVLDIYDAASDQDQ 350 (368)
T ss_dssp EEEECSSCTTS--C-EEEEEEEESSSCCEEECCEEEEEECEEEECCSSSCEEEEEETT-TTEEEEEESSSCEEE
T ss_pred EeccccCcccc--c-CCCEEEEECCCCeEEEEEECCCCcceEEECCCCCEEEEEccCC-CCeEEEEECCCCcEE
Confidence 4210 000 0 23456999999999998887767999999999985 45555 5 899999999999875
No 196
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.30 E-value=4.6e-11 Score=101.93 Aligned_cols=144 Identities=10% Similarity=0.080 Sum_probs=103.6
Q ss_pred cEEEEEEecCCCEEEEEcCCCcEEEEeCCCCe-----------eeEEeccccCCeeEEEEccCCCEEEEEeCCCcEEEEE
Q psy3337 119 LQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMK-----------PLLHIEAHSKEIDDVDFSISGEQIVSIAKDGKAFVWN 187 (297)
Q Consensus 119 ~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~-----------~~~~~~~~~~~v~~~~~sp~~~~l~s~~~d~~v~lwd 187 (297)
.+..+++++...++++|+.++ +.+|++.+.. +.... .+.. |+.++| ++++|+++ .++.|++||
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~f--d~~~L~v~-~~~~l~v~d 112 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCF--HGDQVLVS-TRNALYSLD 112 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEE--ETTEEEEE-ESSEEEEEE
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEE--CCCEEEEE-cCCcEEEEE
Confidence 578999999999999999885 6669864322 11222 3556 999999 89999998 889999999
Q ss_pred cCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCCCceEEEeccCCCeEEEE
Q psy3337 188 SKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSGRLRLAREMKESLSALA 267 (297)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~v~~~~ 267 (297)
+++.........+.-. +..+.+.+.. ++.+.. ||.|.+||+.++.... ....|++++
T Consensus 113 v~sl~~~~~~~~~~~~----------v~~i~~~~p~--~av~~~--------dG~L~v~dl~~~~~~~---~~~~Vs~v~ 169 (388)
T 1xip_A 113 LEELSEFRTVTSFEKP----------VFQLKNVNNT--LVILNS--------VNDLSALDLRTKSTKQ---LAQNVTSFD 169 (388)
T ss_dssp SSSTTCEEEEEECSSC----------EEEEEECSSE--EEEEET--------TSEEEEEETTTCCEEE---EEESEEEEE
T ss_pred chhhhccCccceeecc----------eeeEEecCCC--EEEEEC--------CCCEEEEEccCCcccc---ccCCceEEE
Confidence 9866544444333211 1122233322 666444 9999999999877654 223599999
Q ss_pred EcCCCCEEEEEecCCCeEEEEEeCCce
Q psy3337 268 VRDDGRFVAVGTMFTGSVFVYIAFSLQ 294 (297)
Q Consensus 268 ~s~dg~~l~~~~~~dg~i~vwd~~~~~ 294 (297)
|||+| ++.|.. ||.+++|+...++
T Consensus 170 WSpkG--~~vg~~-dg~i~~~~~~~~~ 193 (388)
T 1xip_A 170 VTNSQ--LAVLLK-DRSFQSFAWRNGE 193 (388)
T ss_dssp ECSSE--EEEEET-TSCEEEEEEETTE
T ss_pred EcCCc--eEEEEc-CCcEEEEcCCCcc
Confidence 99999 678888 9999999887655
No 197
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.29 E-value=4.7e-10 Score=91.12 Aligned_cols=180 Identities=9% Similarity=-0.036 Sum_probs=116.7
Q ss_pred CCCCCceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCeeeEEec-cccCCeeEEEEcc
Q psy3337 92 IDSKEKNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIE-AHSKEIDDVDFSI 169 (297)
Q Consensus 92 ~~~~d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~v~~~~~sp 169 (297)
+...++.|.+ +..++... .+...+...+.+++++++|+++++.. ++.|.+||...... ..+. .....+.+++++|
T Consensus 41 ~~~~~~~i~~~~~~~~~~~-~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~-~~~~~~~~~~p~~i~~~~ 117 (270)
T 1rwi_B 41 SEGMYGRVVKLATGSTGTT-VLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQ-TVLPFDGLNYPEGLAVDT 117 (270)
T ss_dssp ECSSSCEEEEECC-----E-ECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCC-EECCCCSCSSEEEEEECT
T ss_pred ccCCCCcEEEecCCCcccc-eEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceE-eeeecCCcCCCcceEECC
Confidence 3345566666 55443322 22113334577999999999776666 88999999875543 3332 2335689999999
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCC
Q psy3337 170 SGEQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVD 249 (297)
Q Consensus 170 ~~~~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~ 249 (297)
+++++++...++.|.+|+..+........... .....+++++++..+++... ++.|.+||..
T Consensus 118 ~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~----------~~p~~i~~~~~g~l~v~~~~--------~~~i~~~~~~ 179 (270)
T 1rwi_B 118 QGAVYVADRGNNRVVKLAAGSKTQTVLPFTGL----------NDPDGVAVDNSGNVYVTDTD--------NNRVVKLEAE 179 (270)
T ss_dssp TCCEEEEEGGGTEEEEECTTCCSCEECCCCSC----------CSCCCEEECTTCCEEEEEGG--------GTEEEEECTT
T ss_pred CCCEEEEECCCCEEEEEECCCceeEeeccccC----------CCceeEEEeCCCCEEEEECC--------CCEEEEEecC
Confidence 99988877778899999765443322111100 01223778999985555333 6799999998
Q ss_pred CCceEEEeccC-CCeEEEEEcCCCCEEEEEecCCCeEEEEEeCCc
Q psy3337 250 SGRLRLAREMK-ESLSALAVRDDGRFVAVGTMFTGSVFVYIAFSL 293 (297)
Q Consensus 250 ~~~~~~~~~~~-~~v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~~ 293 (297)
........... ..+.+++++++|.++++... ++.|.+||....
T Consensus 180 ~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~-~~~v~~~~~~~~ 223 (270)
T 1rwi_B 180 SNNQVVLPFTDITAPWGIAVDEAGTVYVTEHN-TNQVVKLLAGST 223 (270)
T ss_dssp TCCEEECCCSSCCSEEEEEECTTCCEEEEETT-TSCEEEECTTCS
T ss_pred CCceEeecccCCCCceEEEECCCCCEEEEECC-CCcEEEEcCCCC
Confidence 76654433333 34899999999977777777 889999998654
No 198
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.27 E-value=3.5e-10 Score=104.72 Aligned_cols=179 Identities=11% Similarity=0.019 Sum_probs=120.0
Q ss_pred CCCCCceEEE-EeeCCCeE-EEEecCCCCcEEEEEEecCCCEEEEEcCCCc-------------EEEEeCCCCe----ee
Q psy3337 92 IDSKEKNLRF-GFKTFDSV-QTVFAGSESLQRVVRLSRNGDLMVTGGTDGH-------------LRLWSFPKMK----PL 152 (297)
Q Consensus 92 ~~~~d~~i~~-~~~~~~~~-~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~-------------i~iwd~~~~~----~~ 152 (297)
.++.+.+|++ ++.+++.+ .... .... ...++|+|||+.|+.++.|.. |++|++.++. .+
T Consensus 142 ~G~~~~~i~v~dl~tg~~~~~~~~-~~~~-~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv 219 (695)
T 2bkl_A 142 NAADEAVLHVIDVDSGEWSKVDVI-EGGK-YATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVV 219 (695)
T ss_dssp TTCSCCEEEEEETTTCCBCSSCCB-SCCT-TCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEE
T ss_pred CCCceEEEEEEECCCCCCcCCccc-Cccc-ccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEE
Confidence 4666789999 99998865 2211 1111 158999999999999988776 9999998765 33
Q ss_pred EEeccccCCeeEEEEccCCCEEEEEeCCC----cEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEE
Q psy3337 153 LHIEAHSKEIDDVDFSISGEQIVSIAKDG----KAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFT 228 (297)
Q Consensus 153 ~~~~~~~~~v~~~~~sp~~~~l~s~~~d~----~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~ 228 (297)
.....|...+..+.|+|||++|+.++.++ .|++||..++. ...+..+... . ....+ +++. ++.
T Consensus 220 ~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~-~~~l~~~~~~--~--------~~~~~-~~g~-l~~ 286 (695)
T 2bkl_A 220 HERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKD-FRLLVKGVGA--K--------YEVHA-WKDR-FYV 286 (695)
T ss_dssp ECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSS-CEEEEECSSC--C--------EEEEE-ETTE-EEE
T ss_pred EecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCc-eEEeecCCCc--e--------EEEEe-cCCc-EEE
Confidence 33344556789999999999998877665 67777665543 3333333211 0 01223 5666 555
Q ss_pred eccCcccccCCCCeEEEEeCCCCce---EEEeccC-CC-eEEEEEcCCCCEEEEEecCCCeEEEEEeC
Q psy3337 229 LANPLAQNKRGISYVQQWDVDSGRL---RLAREMK-ES-LSALAVRDDGRFVAVGTMFTGSVFVYIAF 291 (297)
Q Consensus 229 ~~~~~~~~g~~d~~i~~wd~~~~~~---~~~~~~~-~~-v~~~~~s~dg~~l~~~~~~dg~i~vwd~~ 291 (297)
.+. ....++.|.+||+.+++. ...+..+ .. +..++|+ ++.++++... |+..+||.+.
T Consensus 287 ~s~----~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~-dg~~~l~~~~ 348 (695)
T 2bkl_A 287 LTD----EGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLK-DATSEVRVAT 348 (695)
T ss_dssp EEC----TTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEE-TTEEEEEEEE
T ss_pred EEC----CCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEE-CCEEEEEEEe
Confidence 433 023468999999987653 4444443 33 8889998 7788888888 9988888654
No 199
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.26 E-value=4.1e-10 Score=104.99 Aligned_cols=166 Identities=10% Similarity=0.008 Sum_probs=106.6
Q ss_pred CCCCcEEEEEEecCCCEEEEEcCC-----CcEEEEeCCCCeeeEEeccccCCeeEEEEccCCCEEEEEeCCCc-------
Q psy3337 115 GSESLQRVVRLSRNGDLMVTGGTD-----GHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAKDGK------- 182 (297)
Q Consensus 115 ~h~~~v~~~~~s~~g~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~d~~------- 182 (297)
+|...+..++|||||++|+.+..+ ..|++||+.+++.+.. ..+...+..++|+|| +.|+.++.++.
T Consensus 160 ~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~-~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~ 237 (741)
T 1yr2_A 160 DGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLAD-ELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQ 237 (741)
T ss_dssp ---EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEE-EEEEEESCCCEESTT-SEEEEEECCCC-------
T ss_pred CCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCc-cCCCceeccEEEECC-CEEEEEEecCcccccccc
Confidence 344468899999999999876543 4699999999887543 112222468999999 98888876654
Q ss_pred -------EEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCccccc-CCCCeEEEEeCCCC--c
Q psy3337 183 -------AFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNK-RGISYVQQWDVDSG--R 252 (297)
Q Consensus 183 -------v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g-~~d~~i~~wd~~~~--~ 252 (297)
|++|++.++.....+....+....+ +..+.|+|||++|+..... + .....|++||+.++ +
T Consensus 238 ~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~------~~~~~~SpDG~~l~~~~~~----~~~~~~~l~~~d~~~~~~~ 307 (741)
T 1yr2_A 238 ALNYNQTVWLHRLGTPQSADQPVFATPELPKR------GHGASVSSDGRWVVITSSE----GTDPVNTVHVARVTNGKIG 307 (741)
T ss_dssp -CCCCCEEEEEETTSCGGGCEEEECCTTCTTC------EEEEEECTTSCEEEEEEEC----TTCSCCEEEEEEEETTEEC
T ss_pred cCCCCCEEEEEECCCCchhCEEEeccCCCCeE------EEEEEECCCCCEEEEEEEc----cCCCcceEEEEECCCCCCc
Confidence 8899987765321221111111011 2246789999988876540 1 12458999999876 4
Q ss_pred -eEEEeccCCCeEEEEEcCCCCEEEEEecC---CCeEEEEEeCCc
Q psy3337 253 -LRLAREMKESLSALAVRDDGRFVAVGTMF---TGSVFVYIAFSL 293 (297)
Q Consensus 253 -~~~~~~~~~~v~~~~~s~dg~~l~~~~~~---dg~i~vwd~~~~ 293 (297)
..........+... ++|+|..|+..+.. ++.|.+||+.++
T Consensus 308 ~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~ 351 (741)
T 1yr2_A 308 PVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGS 351 (741)
T ss_dssp CCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSS
T ss_pred ccEEecCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCC
Confidence 33333333334444 35899988887751 245999998774
No 200
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.25 E-value=4.8e-10 Score=95.55 Aligned_cols=142 Identities=13% Similarity=0.121 Sum_probs=103.2
Q ss_pred CCCcEEEEeCCCCeeeEEeccccCCeeEEEEccCCCEEEEEe----------CCCcEEEEEcCCCceeeeeeccCCCCce
Q psy3337 137 TDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIA----------KDGKAFVWNSKNGSLSKELKWNTPDNIK 206 (297)
Q Consensus 137 ~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~----------~d~~v~lwd~~~~~~~~~~~~~~~~~~~ 206 (297)
.|+.|.+||..+++.+..+..+..+ .++|+||+++++++. .++.|.+||+.+++.+..+.......
T Consensus 29 ~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~-- 104 (361)
T 2oiz_A 29 TESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRV-- 104 (361)
T ss_dssp GGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBC--
T ss_pred ccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCcccc--
Confidence 4789999999999988888766554 899999999999886 36789999999888887775431000
Q ss_pred EEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCCCceEEE-eccCCCeEEEEEcCCC-CEEEEEecCCCe
Q psy3337 207 YLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSGRLRLA-REMKESLSALAVRDDG-RFVAVGTMFTGS 284 (297)
Q Consensus 207 ~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~-~~~~~~v~~~~~s~dg-~~l~~~~~~dg~ 284 (297)
........++++|||++|+++.. ..++.|.+||+.+++.+.. +.... ...+.+.|++ ..+++.+. ||.
T Consensus 105 --~~g~~p~~i~~spdg~~l~v~n~------~~~~~v~v~d~~~~~~~~~~i~~~~-~~~v~~~p~~~~~~~~~~~-dg~ 174 (361)
T 2oiz_A 105 --QGLNYDGLFRQTTDGKFIVLQNA------SPATSIGIVDVAKGDYVEDVTAAAG-CWSVIPQPNRPRSFMTICG-DGG 174 (361)
T ss_dssp --CBCCCGGGEEECTTSSEEEEEEE------SSSEEEEEEETTTTEEEEEEGGGTT-EEEEEECTTSSSEEEEEET-TSS
T ss_pred --ccCCCcceEEECCCCCEEEEECC------CCCCeEEEEECCCCcEEEEEecCCC-cceeEEcCCCCeeEEEECC-CCc
Confidence 00001123778999999998653 1257999999999998887 65433 2335667765 56667777 888
Q ss_pred EEEEEeCC
Q psy3337 285 VFVYIAFS 292 (297)
Q Consensus 285 i~vwd~~~ 292 (297)
+.+|++..
T Consensus 175 ~~~v~~~~ 182 (361)
T 2oiz_A 175 LLTINLGE 182 (361)
T ss_dssp EEEEEECT
T ss_pred EEEEEECC
Confidence 88888754
No 201
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.24 E-value=2.3e-09 Score=92.88 Aligned_cols=184 Identities=5% Similarity=-0.072 Sum_probs=112.9
Q ss_pred eEEE-EeeCCCeEEEE---ecCCCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCeeeEE----eccccCCe--eEEEE
Q psy3337 98 NLRF-GFKTFDSVQTV---FAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLH----IEAHSKEI--DDVDF 167 (297)
Q Consensus 98 ~i~~-~~~~~~~~~~~---~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~----~~~~~~~v--~~~~~ 167 (297)
.|.+ +...+.....+ .......+.+++++|++..|+.+..++.|+.||..++..... ..++...- ..++|
T Consensus 195 ~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~ 274 (409)
T 3hrp_A 195 TVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIY 274 (409)
T ss_dssp EEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEE
T ss_pred eEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEE
Confidence 5555 66655543343 112445667899999554555577788999999987653222 22222222 39999
Q ss_pred ccC-CCEEEEEeCCCcEEEEEcCCCceeeeeeccC-CCCc-eEEE---EeeeeeeeeeCCCCeEEEEeccCcccccCCCC
Q psy3337 168 SIS-GEQIVSIAKDGKAFVWNSKNGSLSKELKWNT-PDNI-KYLF---KRCRYGLVEDSPKRSRLFTLANPLAQNKRGIS 241 (297)
Q Consensus 168 sp~-~~~l~s~~~d~~v~lwd~~~~~~~~~~~~~~-~~~~-~~~~---~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~ 241 (297)
+|+ +.++++-..++.|+.|+.... +..+.++. ..+. .-.. ....-..++++|+|..+++-. ...+
T Consensus 275 ~p~~g~lyv~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~-------~~~~ 345 (409)
T 3hrp_A 275 YFVDSNFYMSDQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDG-------FKGY 345 (409)
T ss_dssp ETTTTEEEEEETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEET-------TTTC
T ss_pred eCCCCEEEEEeCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeC-------CCCC
Confidence 995 556666667889999987533 33333221 0000 0000 001123588999998555532 0378
Q ss_pred eEEEEeCCCCceEEEecc---------------CCCeEEEEEcCCCCEEEEEecCCCeEEEEEeC
Q psy3337 242 YVQQWDVDSGRLRLAREM---------------KESLSALAVRDDGRFVAVGTMFTGSVFVYIAF 291 (297)
Q Consensus 242 ~i~~wd~~~~~~~~~~~~---------------~~~v~~~~~s~dg~~l~~~~~~dg~i~vwd~~ 291 (297)
.|+.|++.++........ -.....++++++|.++++-.. ++.|+.++++
T Consensus 346 ~I~~~~~~~G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~-n~~Ir~i~~e 409 (409)
T 3hrp_A 346 CLRKLDILDGYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAW-GKAIRKYAVE 409 (409)
T ss_dssp EEEEEETTTTEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEEST-TCEEEEEEEC
T ss_pred EEEEEECCCCEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECC-CCeEEEEEeC
Confidence 999999877765433321 123899999999877777777 8999988763
No 202
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.23 E-value=1.7e-08 Score=82.79 Aligned_cols=154 Identities=9% Similarity=-0.023 Sum_probs=108.5
Q ss_pred CCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCeeeE-EeccccCCeeEEEEccCCCEEEEEeCCCcEEEEEcCCCcee
Q psy3337 116 SESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLL-HIEAHSKEIDDVDFSISGEQIVSIAKDGKAFVWNSKNGSLS 194 (297)
Q Consensus 116 h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~-~~~~~~~~v~~~~~sp~~~~l~s~~~d~~v~lwd~~~~~~~ 194 (297)
....+..++++++|+++++...++.|.+||. +++... .+..+...+..+++.++++++++...++.|..||. +++..
T Consensus 97 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~ 174 (299)
T 2z2n_A 97 PDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDIT 174 (299)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEE
T ss_pred cCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEE
Confidence 4557889999999998888878889999998 554332 23334557899999999988887777789999998 66543
Q ss_pred eeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCCCceEEE-eccC-CCeEEEEEcCCC
Q psy3337 195 KELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSGRLRLA-REMK-ESLSALAVRDDG 272 (297)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~-~~~~-~~v~~~~~s~dg 272 (297)
. +...... . ....+++++++..+++.. ..+.|.+||. +++.... +... ..+.+++++++|
T Consensus 175 ~-~~~~~~~--~------~~~~i~~~~~g~l~v~~~--------~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g 236 (299)
T 2z2n_A 175 E-FKIPTPA--S------GPVGITKGNDDALWFVEI--------IGNKIGRITT-SGEITEFKIPTPNARPHAITAGAGI 236 (299)
T ss_dssp E-EECSSTT--C------CEEEEEECTTSSEEEEET--------TTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTT
T ss_pred E-eeCCCCC--C------cceeEEECCCCCEEEEcc--------CCceEEEECC-CCcEEEEECCCCCCCceeEEECCCC
Confidence 3 2111111 1 122477899988665533 3678999999 6664432 2222 349999999999
Q ss_pred CEEEEEecCCCeEEEEEe
Q psy3337 273 RFVAVGTMFTGSVFVYIA 290 (297)
Q Consensus 273 ~~l~~~~~~dg~i~vwd~ 290 (297)
+..++... ++.|.+||.
T Consensus 237 ~l~v~~~~-~~~i~~~d~ 253 (299)
T 2z2n_A 237 DLWFTEWG-ANKIGRLTS 253 (299)
T ss_dssp CEEEEETT-TTEEEEEET
T ss_pred CEEEeccC-CceEEEECC
Confidence 86666556 789999997
No 203
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.20 E-value=3.8e-09 Score=87.37 Aligned_cols=181 Identities=11% Similarity=0.088 Sum_probs=114.5
Q ss_pred CCCCCceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCeeeEEecc----ccCCeeEEE
Q psy3337 92 IDSKEKNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEA----HSKEIDDVD 166 (297)
Q Consensus 92 ~~~~d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~----~~~~v~~~~ 166 (297)
+...++.|.. +..+++. ..+ .....+.+++++|+|+++++. ++.|.+||..+++....... ....+.+++
T Consensus 30 ~d~~~~~i~~~d~~~~~~-~~~--~~~~~~~~i~~~~dG~l~v~~--~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~ 104 (297)
T 3g4e_A 30 VDIPAKKVCRWDSFTKQV-QRV--TMDAPVSSVALRQSGGYVATI--GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGK 104 (297)
T ss_dssp EETTTTEEEEEETTTCCE-EEE--ECSSCEEEEEEBTTSSEEEEE--TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEE
T ss_pred EECCCCEEEEEECCCCcE-EEE--eCCCceEEEEECCCCCEEEEE--CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEE
Confidence 3344556666 6666554 333 345678999999999955553 56799999987764332221 123578999
Q ss_pred EccCCCEEEEEeCC---------CcEEEEEcCC-CceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccc
Q psy3337 167 FSISGEQIVSIAKD---------GKAFVWNSKN-GSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQN 236 (297)
Q Consensus 167 ~sp~~~~l~s~~~d---------~~v~lwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~ 236 (297)
++|+|+++++.... ..-.||.+.. ++... +... ....+.++|+|+++.|+.+..
T Consensus 105 ~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~-~~~~----------~~~pngi~~spdg~~lyv~~~----- 168 (297)
T 3g4e_A 105 VDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKK-YFDQ----------VDISNGLDWSLDHKIFYYIDS----- 168 (297)
T ss_dssp ECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEE-EEEE----------ESBEEEEEECTTSCEEEEEEG-----
T ss_pred ECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEE-Eeec----------cccccceEEcCCCCEEEEecC-----
Confidence 99999977754321 2234554432 32221 1110 011235889999998776532
Q ss_pred cCCCCeEEEEeC--CCCceE-----EEeccC-CCeEEEEEcCCCCEEEEEecCCCeEEEEEeCCceec
Q psy3337 237 KRGISYVQQWDV--DSGRLR-----LAREMK-ESLSALAVRDDGRFVAVGTMFTGSVFVYIAFSLQMC 296 (297)
Q Consensus 237 g~~d~~i~~wd~--~~~~~~-----~~~~~~-~~v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~~~~~ 296 (297)
..+.|.+||+ .++... ..+... ..+..++++++|++.++... ++.|.+||..+++.+
T Consensus 169 --~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~-~~~v~~~d~~tG~~~ 233 (297)
T 3g4e_A 169 --LSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYN-GGRVIRLDPVTGKRL 233 (297)
T ss_dssp --GGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEET-TTEEEEECTTTCCEE
T ss_pred --CCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcC-CCEEEEEcCCCceEE
Confidence 3678999987 445432 222222 23889999999988777777 889999999887754
No 204
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.20 E-value=3.4e-09 Score=87.88 Aligned_cols=159 Identities=10% Similarity=0.085 Sum_probs=106.6
Q ss_pred CcEEEEEEecCCCEEEEEcCC---------------CcEEEEeCCCCeeeEEeccccCCeeEEEEc----cCCCEEEEE-
Q psy3337 118 SLQRVVRLSRNGDLMVTGGTD---------------GHLRLWSFPKMKPLLHIEAHSKEIDDVDFS----ISGEQIVSI- 177 (297)
Q Consensus 118 ~~v~~~~~s~~g~~l~s~~~d---------------~~i~iwd~~~~~~~~~~~~~~~~v~~~~~s----p~~~~l~s~- 177 (297)
..+.+++++++|+++++...+ +.|..||.. ++... +..+......++|+ |+++.|+.+
T Consensus 117 ~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~-~~~~~~~~~~i~~~~~~d~dg~~l~v~~ 194 (314)
T 1pjx_A 117 QGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQ-VDTAFQFPNGIAVRHMNDGRPYQLIVAE 194 (314)
T ss_dssp BCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEE-EEEEESSEEEEEEEECTTSCEEEEEEEE
T ss_pred cCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEE-eccCCCCcceEEEecccCCCCCEEEEEE
Confidence 347899999999888777655 567777765 54432 33344457889999 999765554
Q ss_pred eCCCcEEEEEcC-CCceee--eeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCCCceE
Q psy3337 178 AKDGKAFVWNSK-NGSLSK--ELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSGRLR 254 (297)
Q Consensus 178 ~~d~~v~lwd~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~~ 254 (297)
..++.|.+||+. ++.... .+.. .+.. . ......++++++|..+++... ++.|.+||..+++.+
T Consensus 195 ~~~~~i~~~~~~~~g~~~~~~~~~~-~~~~-~----~~~p~~i~~d~~G~l~v~~~~--------~~~i~~~d~~~g~~~ 260 (314)
T 1pjx_A 195 TPTKKLWSYDIKGPAKIENKKVWGH-IPGT-H----EGGADGMDFDEDNNLLVANWG--------SSHIEVFGPDGGQPK 260 (314)
T ss_dssp TTTTEEEEEEEEETTEEEEEEEEEE-CCCC-S----SCEEEEEEEBTTCCEEEEEET--------TTEEEEECTTCBSCS
T ss_pred CCCCeEEEEECCCCCccccceEEEE-CCCC-C----CCCCCceEECCCCCEEEEEcC--------CCEEEEEcCCCCcEe
Confidence 567899999986 443211 1110 0100 0 011234778999987766433 689999999877766
Q ss_pred EEeccCCC-eEEEEEcCCCCEEEEEecCCCeEEEEEeCC
Q psy3337 255 LAREMKES-LSALAVRDDGRFVAVGTMFTGSVFVYIAFS 292 (297)
Q Consensus 255 ~~~~~~~~-v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~ 292 (297)
..+..+.. +.+++|+|+|+.|++++..++.|..|++..
T Consensus 261 ~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 261 MRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp EEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred EEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 66666544 999999999996665554268999999864
No 205
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.20 E-value=1.3e-12 Score=111.71 Aligned_cols=177 Identities=16% Similarity=0.036 Sum_probs=100.5
Q ss_pred CCCCCceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCeeeEEeccccCC-ee-EEEEc
Q psy3337 92 IDSKEKNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKE-ID-DVDFS 168 (297)
Q Consensus 92 ~~~~d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~-v~-~~~~s 168 (297)
.++.|+.|+. |..+|+.+-.+. . +.+.+..+.+++..+++++.|+.|+.||..+++.+..+..+... +. +..+.
T Consensus 14 ~gs~dg~v~a~d~~tG~~~W~~~-~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp~~~ 90 (369)
T 2hz6_A 14 VSTLDGSLHAVSKRTGSIKWTLK-E--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQASPCRS 90 (369)
T ss_dssp EEETTSEEEEEETTTCCEEEEEE-C--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTCSCC-
T ss_pred EEcCCCEEEEEECCCCCEEEEec-C--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccCceEe
Confidence 5667888888 999999988886 4 44555556677888888899999999999999887766543211 11 11111
Q ss_pred cCCCEEEEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeC
Q psy3337 169 ISGEQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDV 248 (297)
Q Consensus 169 p~~~~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~ 248 (297)
.+..+++++.|+.|+.||..+|+.+..+..+.. ..++|++..+++.+ .++.|+.||.
T Consensus 91 -~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~--------------~~~~p~~~~v~~~~--------~dg~v~a~d~ 147 (369)
T 2hz6_A 91 -SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAFA--------------DSLSPSTSLLYLGR--------TEYTITMYDT 147 (369)
T ss_dssp -----CCCCEEEEEEEEECCC------------------------------------EEEEE--------EEEEEECCCS
T ss_pred -cCCEEEEEeCCCEEEEEECCCCcEEEEecCCCc--------------ccccccCCEEEEEe--------cCCEEEEEEC
Confidence 345677788899999999999988877654321 22356777777744 4899999999
Q ss_pred CCCceEEEeccCCCeEEEEEcCCC---CEEEEEecCCCeEEEEEeCCceec
Q psy3337 249 DSGRLRLAREMKESLSALAVRDDG---RFVAVGTMFTGSVFVYIAFSLQMC 296 (297)
Q Consensus 249 ~~~~~~~~~~~~~~v~~~~~s~dg---~~l~~~~~~dg~i~vwd~~~~~~~ 296 (297)
.+|+.+..+.... ...+.++++. ..+++++. ||.|+.||..+++.+
T Consensus 148 ~tG~~~W~~~~~~-~~~~~~~~~~~~~~~v~~~~~-dg~v~a~d~~tG~~~ 196 (369)
T 2hz6_A 148 KTRELRWNATYFD-YAASLPEDDVDYKMSHFVSNG-DGLVVTVDSESGDVL 196 (369)
T ss_dssp SSSSCCCEEEEEE-ECCBCCCCCTTCCCCEEEEET-SCEEEEECTTTCCEE
T ss_pred CCCCEEEeEeccc-ccCccccCCccccceEEEECC-CCEEEEEECCCCcEE
Confidence 9988765543221 2233344432 56777888 999999999988754
No 206
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.18 E-value=4e-09 Score=94.91 Aligned_cols=148 Identities=16% Similarity=0.074 Sum_probs=114.0
Q ss_pred cCCCEEEEEcCCCcEEEEeCCCCeeeEEeccccCCeeEEEEccCCCEEEEEeCCCcEEEEEcC--CCceeeeeeccCCCC
Q psy3337 127 RNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAKDGKAFVWNSK--NGSLSKELKWNTPDN 204 (297)
Q Consensus 127 ~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~d~~v~lwd~~--~~~~~~~~~~~~~~~ 204 (297)
|.+.++++...++.|.++|..+++.+..+.. ...+..+.|+||++++++++.|+.|.+||+. +++.+..+....
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~-g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~--- 240 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEIKTVLDT-GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGS--- 240 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCEEEEEEC-SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCS---
T ss_pred CCceEEEEeCCCCeEEEEECCCCeEEEEEeC-CCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCC---
Confidence 4456777888899999999999998888864 3357799999999999999999999999996 777776664321
Q ss_pred ceEEEEeeeeeeeeeC----CCCeEEEEeccCcccccCCCCeEEEEeCCCCceEEEeccC-----------C-CeEEEEE
Q psy3337 205 IKYLFKRCRYGLVEDS----PKRSRLFTLANPLAQNKRGISYVQQWDVDSGRLRLAREMK-----------E-SLSALAV 268 (297)
Q Consensus 205 ~~~~~~~~~~~~~~~s----~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~-----------~-~v~~~~~ 268 (297)
. -..++++ |||++++++.. .++.|.++|..+.+.+..+... . .+..+..
T Consensus 241 -~-------P~~ia~s~~~~pDGk~l~v~n~-------~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~ 305 (567)
T 1qks_A 241 -E-------ARSIETSKMEGWEDKYAIAGAY-------WPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILA 305 (567)
T ss_dssp -E-------EEEEEECCSTTCTTTEEEEEEE-------ETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEE
T ss_pred -C-------CceeEEccccCCCCCEEEEEEc-------cCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEE
Confidence 1 1137789 69999988754 4689999999999888776532 2 3788899
Q ss_pred cCCCCEEEEEecCCCeEEEEEeCCc
Q psy3337 269 RDDGRFVAVGTMFTGSVFVYIAFSL 293 (297)
Q Consensus 269 s~dg~~l~~~~~~dg~i~vwd~~~~ 293 (297)
++++..++.....+|.|.++|..+.
T Consensus 306 s~~~~~~vv~~~~~g~v~~vd~~~~ 330 (567)
T 1qks_A 306 SHYRPEFIVNVKETGKILLVDYTDL 330 (567)
T ss_dssp CSSSSEEEEEETTTTEEEEEETTCS
T ss_pred cCCCCEEEEEecCCCeEEEEecCCC
Confidence 9987665554443799999997653
No 207
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.18 E-value=7.2e-09 Score=86.01 Aligned_cols=173 Identities=9% Similarity=-0.043 Sum_probs=114.5
Q ss_pred eEEEEecCCCCcEEEEEEecCCC-EEEEEcCCCcEEEEeCCCCeeeEEeccccCCeeEEEEccCCCEEEEEeCCCcEEEE
Q psy3337 108 SVQTVFAGSESLQRVVRLSRNGD-LMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAKDGKAFVW 186 (297)
Q Consensus 108 ~~~~~~~~h~~~v~~~~~s~~g~-~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~d~~v~lw 186 (297)
.+..+. ..........|+|+|+ ++++...++.|..|+. +++ ...+..+...+..++++++|+++++...++.|.+|
T Consensus 36 ~~~~l~-~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~ 112 (305)
T 3dr2_A 36 RLLTLY-DQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRS 112 (305)
T ss_dssp CCEEEE-CCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEE
T ss_pred ceEEEe-cCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEE
Confidence 344554 4555677999999998 6677778899999997 454 34555566778999999999977766666889999
Q ss_pred EcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEec----cC-----cccccCCCCeEEEEeCCCCceEEEe
Q psy3337 187 NSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLA----NP-----LAQNKRGISYVQQWDVDSGRLRLAR 257 (297)
Q Consensus 187 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~----~~-----~~~~g~~d~~i~~wd~~~~~~~~~~ 257 (297)
+.. ++. ..+...... ........++++|+|..+++-. .. ........+.|+.||..+++.....
T Consensus 113 ~~~-g~~-~~~~~~~~~-----~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~ 185 (305)
T 3dr2_A 113 DAD-GQA-HLLVGRYAG-----KRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA 185 (305)
T ss_dssp CTT-SCE-EEEECEETT-----EECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE
T ss_pred CCC-CCE-EEEEeccCC-----CccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe
Confidence 975 543 222211100 0111234578899998777521 00 0000011357888888777655444
Q ss_pred ccCCCeEEEEEcCCCCEEEEEecCC------CeEEEEEeCC
Q psy3337 258 EMKESLSALAVRDDGRFVAVGTMFT------GSVFVYIAFS 292 (297)
Q Consensus 258 ~~~~~v~~~~~s~dg~~l~~~~~~d------g~i~vwd~~~ 292 (297)
.......++|+|||+.|+++.. . +.|++|++..
T Consensus 186 -~~~~p~gl~~spdg~~lyv~~~-~~~~~~~~~i~~~~~~~ 224 (305)
T 3dr2_A 186 -DLDHPNGLAFSPDEQTLYVSQT-PEQGHGSVEITAFAWRD 224 (305)
T ss_dssp -EESSEEEEEECTTSSEEEEEEC-CC---CCCEEEEEEEET
T ss_pred -cCCCCcceEEcCCCCEEEEEec-CCcCCCCCEEEEEEecC
Confidence 3334789999999998888776 5 6899999864
No 208
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.16 E-value=2.5e-08 Score=81.83 Aligned_cols=176 Identities=7% Similarity=0.015 Sum_probs=118.6
Q ss_pred CceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCee-eEEeccccCCeeEEEEccCCCE
Q psy3337 96 EKNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKP-LLHIEAHSKEIDDVDFSISGEQ 173 (297)
Q Consensus 96 d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~-~~~~~~~~~~v~~~~~sp~~~~ 173 (297)
++.|.+ +.. ++........+...+.+++++++|+++++...++.|..||.. ++. ...+......+.++++.|++++
T Consensus 35 ~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l 112 (299)
T 2z2n_A 35 ANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-GIIKEYTLPNPDSAPYGITEGPNGDI 112 (299)
T ss_dssp TTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCE
T ss_pred CCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-CcEEEEeCCCcCCCceeeEECCCCCE
Confidence 455555 555 443322212345678999999999988887778899999976 332 2222234557899999999988
Q ss_pred EEEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCCCce
Q psy3337 174 IVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSGRL 253 (297)
Q Consensus 174 l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~ 253 (297)
+++...++.|.+||. +++... +...... .....+++++++..+++.. ..+.|..||. +++.
T Consensus 113 ~v~~~~~~~i~~~d~-~g~~~~-~~~~~~~--------~~~~~i~~~~~g~l~v~~~--------~~~~i~~~~~-~g~~ 173 (299)
T 2z2n_A 113 WFTEMNGNRIGRITD-DGKIRE-YELPNKG--------SYPSFITLGSDNALWFTEN--------QNNAIGRITE-SGDI 173 (299)
T ss_dssp EEEETTTTEEEEECT-TCCEEE-EECSSTT--------CCEEEEEECTTSCEEEEET--------TTTEEEEECT-TCCE
T ss_pred EEEecCCceEEEECC-CCCEEE-ecCCCCC--------CCCceEEEcCCCCEEEEeC--------CCCEEEEEcC-CCcE
Confidence 888777889999998 554432 2111111 1123477899997666533 3678999999 6665
Q ss_pred EEE-eccCC-CeEEEEEcCCCCEEEEEecCCCeEEEEEeCCce
Q psy3337 254 RLA-REMKE-SLSALAVRDDGRFVAVGTMFTGSVFVYIAFSLQ 294 (297)
Q Consensus 254 ~~~-~~~~~-~v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~~~ 294 (297)
... +.... .+.+++++++|.+.++... ++.|.+||. +++
T Consensus 174 ~~~~~~~~~~~~~~i~~~~~g~l~v~~~~-~~~i~~~~~-~g~ 214 (299)
T 2z2n_A 174 TEFKIPTPASGPVGITKGNDDALWFVEII-GNKIGRITT-SGE 214 (299)
T ss_dssp EEEECSSTTCCEEEEEECTTSSEEEEETT-TTEEEEECT-TCC
T ss_pred EEeeCCCCCCcceeEEECCCCCEEEEccC-CceEEEECC-CCc
Confidence 543 22222 3889999999997777666 789999998 554
No 209
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.15 E-value=2.7e-09 Score=99.50 Aligned_cols=175 Identities=13% Similarity=0.119 Sum_probs=116.2
Q ss_pred ceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCEEEEEcCCCc--------------EEEEeCCCCe----eeEEecc
Q psy3337 97 KNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGH--------------LRLWSFPKMK----PLLHIEA 157 (297)
Q Consensus 97 ~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~--------------i~iwd~~~~~----~~~~~~~ 157 (297)
.+|++ ++.+++.+.... +...+..++|+|| +.|+.++.++. |++|++.++. .+.....
T Consensus 189 ~~i~v~dl~tg~~~~~~~--~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~ 265 (741)
T 1yr2_A 189 RTVKFVGVADGKPLADEL--KWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPE 265 (741)
T ss_dssp EEEEEEETTTCCEEEEEE--EEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTT
T ss_pred EEEEEEECCCCCCCCccC--CCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCC
Confidence 57888 999988765422 2222357899999 99988877654 8999987665 2222233
Q ss_pred ccCCeeEEEEccCCCEEEEEeCCC-----cEEEEEcCCC--ceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEec
Q psy3337 158 HSKEIDDVDFSISGEQIVSIAKDG-----KAFVWNSKNG--SLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLA 230 (297)
Q Consensus 158 ~~~~v~~~~~sp~~~~l~s~~~d~-----~v~lwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~ 230 (297)
+...+..+.|+|||++|+..+.++ .|++||+.++ +....+..+... ... . ++|+|..|+..+
T Consensus 266 ~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~--~~~--------~-~~~dg~~l~~~s 334 (741)
T 1yr2_A 266 LPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKA--QWD--------F-VDGVGDQLWFVS 334 (741)
T ss_dssp CTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSS--CEE--------E-EEEETTEEEEEE
T ss_pred CCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCc--eEE--------E-EeccCCEEEEEE
Confidence 334588999999999988776543 7999999876 313444333211 110 1 247888888766
Q ss_pred cCcccccCCCCeEEEEeCCCC--ceEEEeccCCC-eEEEEEcCCCCEEEEEecCCCeEEEEEeC
Q psy3337 231 NPLAQNKRGISYVQQWDVDSG--RLRLAREMKES-LSALAVRDDGRFVAVGTMFTGSVFVYIAF 291 (297)
Q Consensus 231 ~~~~~~g~~d~~i~~wd~~~~--~~~~~~~~~~~-v~~~~~s~dg~~l~~~~~~dg~i~vwd~~ 291 (297)
.. +...+.|.+||+.++ +....+..+.. +..++|+ ++.++++... |+..+||.+.
T Consensus 335 ~~----~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~-dg~~~l~~~~ 392 (741)
T 1yr2_A 335 GD----GAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIH-DAKSQVLAFD 392 (741)
T ss_dssp CT----TCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEE-TTEEEEEEEE
T ss_pred CC----CCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEE-CCEEEEEEEe
Confidence 51 233577999999874 34444555544 7778887 6677788888 8887777554
No 210
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.14 E-value=5.2e-09 Score=89.90 Aligned_cols=194 Identities=13% Similarity=0.130 Sum_probs=128.5
Q ss_pred cCCCCCCCceEEE-EeeCC----CeEEEEe------cCCCCcEEEEEEecCCCEEEEEcCC------CcEEEEeCCCCee
Q psy3337 89 LNSIDSKEKNLRF-GFKTF----DSVQTVF------AGSESLQRVVRLSRNGDLMVTGGTD------GHLRLWSFPKMKP 151 (297)
Q Consensus 89 l~~~~~~d~~i~~-~~~~~----~~~~~~~------~~h~~~v~~~~~s~~g~~l~s~~~d------~~i~iwd~~~~~~ 151 (297)
|-.++..+++|.+ |..+. +...++. ......-..+..+|+| +++++..+ +.|.++|..+.+.
T Consensus 98 l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v 176 (462)
T 2ece_A 98 LIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEP 176 (462)
T ss_dssp EEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCE
T ss_pred EEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeE
Confidence 3446777788999 88655 4555551 0011234577889999 77776665 7899999999999
Q ss_pred eEEecccc---CCeeEEEEccCCCEEEEEe-------------------CCCcEEEEEcCCCceeeeeeccCCCCceEEE
Q psy3337 152 LLHIEAHS---KEIDDVDFSISGEQIVSIA-------------------KDGKAFVWNSKNGSLSKELKWNTPDNIKYLF 209 (297)
Q Consensus 152 ~~~~~~~~---~~v~~~~~sp~~~~l~s~~-------------------~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~ 209 (297)
+.++.... ..-..+.|+|+++.++++. .+.+|.+||+.+++.+.++....+......+
T Consensus 177 ~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i 256 (462)
T 2ece_A 177 LGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALEL 256 (462)
T ss_dssp EEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEE
T ss_pred EEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCcccee
Confidence 88886332 2245688999999988885 3689999999988877777653211001111
Q ss_pred EeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCCCce--EEEe--cc-----------------CCCeEEEEE
Q psy3337 210 KRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSGRL--RLAR--EM-----------------KESLSALAV 268 (297)
Q Consensus 210 ~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~--~~~~--~~-----------------~~~v~~~~~ 268 (297)
.++++|++++++.+.. +-.-..++.|.+|....++. ...+ .. ...+..+.+
T Consensus 257 ------~f~~~Pdg~~aYV~~e--~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~l 328 (462)
T 2ece_A 257 ------RPLHDPTKLMGFINMV--VSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDI 328 (462)
T ss_dssp ------EECSSTTCCEEEEEEE--EETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEE
T ss_pred ------EeeECCCCCEEEEEEe--eeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEE
Confidence 1345999998887542 00001367787766554321 1111 10 123788999
Q ss_pred cCCCCEEEEEecCCCeEEEEEeC
Q psy3337 269 RDDGRFVAVGTMFTGSVFVYIAF 291 (297)
Q Consensus 269 s~dg~~l~~~~~~dg~i~vwd~~ 291 (297)
||||++|.++....+.|.+||+.
T Consensus 329 S~DGrfLYVSnrg~d~VavfdV~ 351 (462)
T 2ece_A 329 SLDDKFLYLSLWGIGEVRQYDIS 351 (462)
T ss_dssp CTTSCEEEEEETTTTEEEEEECS
T ss_pred CCCCCEEEEEeCCCCEEEEEEec
Confidence 99999999988878999999985
No 211
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.14 E-value=6.8e-08 Score=79.21 Aligned_cols=172 Identities=7% Similarity=-0.068 Sum_probs=114.9
Q ss_pred CceEEE-EeeCCCeEEEEe-cCCCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCeeeE-EeccccCCeeEEEEccCCC
Q psy3337 96 EKNLRF-GFKTFDSVQTVF-AGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLL-HIEAHSKEIDDVDFSISGE 172 (297)
Q Consensus 96 d~~i~~-~~~~~~~~~~~~-~~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~-~~~~~~~~v~~~~~sp~~~ 172 (297)
++.|.. +.. ++.. .+. ......+.++++.++|+++++...++.|..||.. ++... .+......+.++++.++++
T Consensus 82 ~~~v~~~d~~-g~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~ 158 (300)
T 2qc5_A 82 ANKIGKLSKK-GGFT-EYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNA 158 (300)
T ss_dssp TTEEEEECTT-SCEE-EEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSS
T ss_pred CCeEEEECCC-CCeE-EecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCC
Confidence 445555 555 5443 332 2344668899999999988888778899999987 55432 2333455789999999999
Q ss_pred EEEEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCCCc
Q psy3337 173 QIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSGR 252 (297)
Q Consensus 173 ~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~ 252 (297)
++++...++.|..||. +++... +...... . ....+++++++..+++... .+.|.+||. +++
T Consensus 159 l~v~~~~~~~i~~~~~-~g~~~~-~~~~~~~--~------~~~~i~~d~~g~l~v~~~~--------~~~i~~~~~-~g~ 219 (300)
T 2qc5_A 159 LWFTENQNNSIGRITN-TGKLEE-YPLPTNA--A------APVGITSGNDGALWFVEIM--------GNKIGRITT-TGE 219 (300)
T ss_dssp EEEEETTTTEEEEECT-TCCEEE-EECSSTT--C------CEEEEEECTTSSEEEEETT--------TTEEEEECT-TCC
T ss_pred EEEEecCCCeEEEECC-CCcEEE-eeCCCCC--C------CcceEEECCCCCEEEEccC--------CCEEEEEcC-CCc
Confidence 7777666788999998 554432 3221111 1 1224678888876655332 578999998 455
Q ss_pred eEEE-eccC-CCeEEEEEcCCCCEEEEEecCCCeEEEEEe
Q psy3337 253 LRLA-REMK-ESLSALAVRDDGRFVAVGTMFTGSVFVYIA 290 (297)
Q Consensus 253 ~~~~-~~~~-~~v~~~~~s~dg~~l~~~~~~dg~i~vwd~ 290 (297)
.... +... ..+.+++++++|+..++... ++.|..||.
T Consensus 220 ~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~-~~~i~~~~~ 258 (300)
T 2qc5_A 220 ISEYDIPTPNARPHAITAGKNSEIWFTEWG-ANQIGRITN 258 (300)
T ss_dssp EEEEECSSTTCCEEEEEECSTTCEEEEETT-TTEEEEECT
T ss_pred EEEEECCCCCCCceEEEECCCCCEEEeccC-CCeEEEECC
Confidence 4433 2222 33899999999986666655 789999987
No 212
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.13 E-value=1.1e-08 Score=84.79 Aligned_cols=181 Identities=9% Similarity=0.034 Sum_probs=117.3
Q ss_pred CCCCceEEE-EeeCCCeEEEEe---cCCCCcEEEEEEecC-CCEEEEEcCCCcEEEEeCCCCeeeEE-ecc----ccCCe
Q psy3337 93 DSKEKNLRF-GFKTFDSVQTVF---AGSESLQRVVRLSRN-GDLMVTGGTDGHLRLWSFPKMKPLLH-IEA----HSKEI 162 (297)
Q Consensus 93 ~~~d~~i~~-~~~~~~~~~~~~---~~h~~~v~~~~~s~~-g~~l~s~~~d~~i~iwd~~~~~~~~~-~~~----~~~~v 162 (297)
+..++.|.+ +..+++...... .++...+.+++++++ |+++++.. .+.|.+||.. ++.... ... ....+
T Consensus 42 ~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~-~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~ 119 (314)
T 1pjx_A 42 GKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM-RLGLLVVQTD-GTFEEIAKKDSEGRRMQGC 119 (314)
T ss_dssp TEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEET-TTEEEEEETT-SCEEECCSBCTTSCBCBCC
T ss_pred CCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC-CCCEEEEeCC-CCEEEEEeccCCCccccCC
Confidence 345667777 767776543221 125567889999999 76555554 4479999988 664332 221 12358
Q ss_pred eEEEEccCCCEEEEEeCC---------------CcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeC----CCC
Q psy3337 163 DDVDFSISGEQIVSIAKD---------------GKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDS----PKR 223 (297)
Q Consensus 163 ~~~~~sp~~~~l~s~~~d---------------~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s----~~~ 223 (297)
.+++++|+++++++...+ +.|..||.. ++........ .....++++ |++
T Consensus 120 ~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~-----------~~~~~i~~~~~~d~dg 187 (314)
T 1pjx_A 120 NDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAF-----------QFPNGIAVRHMNDGRP 187 (314)
T ss_dssp CEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEE-----------SSEEEEEEEECTTSCE
T ss_pred cCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCC-----------CCcceEEEecccCCCC
Confidence 899999999888776654 567777764 4432221110 112346778 999
Q ss_pred eEEEEeccCcccccCCCCeEEEEeCC-CCc-----eEEEeccC--CCeEEEEEcCCCCEEEEEecCCCeEEEEEeCCcee
Q psy3337 224 SRLFTLANPLAQNKRGISYVQQWDVD-SGR-----LRLAREMK--ESLSALAVRDDGRFVAVGTMFTGSVFVYIAFSLQM 295 (297)
Q Consensus 224 ~~l~~~~~~~~~~g~~d~~i~~wd~~-~~~-----~~~~~~~~--~~v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~~~~ 295 (297)
+.++.+. ..++.|.+||+. +++ ....+..+ ..+..++++++|+++++... ++.|.+||..+++.
T Consensus 188 ~~l~v~~-------~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~-~~~i~~~d~~~g~~ 259 (314)
T 1pjx_A 188 YQLIVAE-------TPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWG-SSHIEVFGPDGGQP 259 (314)
T ss_dssp EEEEEEE-------TTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEET-TTEEEEECTTCBSC
T ss_pred CEEEEEE-------CCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcC-CCEEEEEcCCCCcE
Confidence 7766643 236899999986 444 22333434 33889999999998888877 89999999886654
No 213
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.11 E-value=4.4e-08 Score=79.05 Aligned_cols=180 Identities=9% Similarity=0.018 Sum_probs=122.7
Q ss_pred CceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCEE-EEEcCCCcEEEEeCCCCeeeEEeccccCCeeEEEEccCCCE
Q psy3337 96 EKNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDLM-VTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQ 173 (297)
Q Consensus 96 d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l-~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~ 173 (297)
++.|++ |+.+++.+..+..+.......+++. ++.| ++.-.++.+.++|..+.+.+.++..... ....+++|+..
T Consensus 43 ~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~v~~~i~~g~~--~g~glt~Dg~~ 118 (266)
T 2iwa_A 43 RSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSNIKNFTHQMK--DGWGLATDGKI 118 (266)
T ss_dssp TCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTEEEEEEECCSS--SCCEEEECSSS
T ss_pred CCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCCcEEEEEECCCC--CeEEEEECCCE
Confidence 568888 9999999988763333333345554 4444 4555688999999999998888853212 23446668887
Q ss_pred EEEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCCCce
Q psy3337 174 IVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSGRL 253 (297)
Q Consensus 174 l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~ 253 (297)
++.+..++.|.++|..+.+.+..+...... .. ....+.+.+. ++...+... .++.|.+.|..+++.
T Consensus 119 l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~--~p---~~~~nele~~-dg~lyvn~~--------~~~~V~vID~~tg~V 184 (266)
T 2iwa_A 119 LYGSDGTSILYEIDPHTFKLIKKHNVKYNG--HR---VIRLNELEYI-NGEVWANIW--------QTDCIARISAKDGTL 184 (266)
T ss_dssp EEEECSSSEEEEECTTTCCEEEEEECEETT--EE---CCCEEEEEEE-TTEEEEEET--------TSSEEEEEETTTCCE
T ss_pred EEEECCCCeEEEEECCCCcEEEEEEECCCC--cc---cccceeEEEE-CCEEEEecC--------CCCeEEEEECCCCcE
Confidence 777777899999999998887776532100 00 0012235566 665444432 368999999999999
Q ss_pred EEEeccC--------------CCeEEEEEcCCCCEEEEEecCCCeEEEEEeCCc
Q psy3337 254 RLAREMK--------------ESLSALAVRDDGRFVAVGTMFTGSVFVYIAFSL 293 (297)
Q Consensus 254 ~~~~~~~--------------~~v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~~ 293 (297)
+..+... .....++|+|+++.|++++...+.|.+.++...
T Consensus 185 ~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 185 LGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp EEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred EEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 8887642 136899999998766555543889999888654
No 214
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.11 E-value=1.7e-08 Score=87.45 Aligned_cols=186 Identities=11% Similarity=0.032 Sum_probs=116.0
Q ss_pred CCCCceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCEEEEEcCCC--cEEEEeCCCCeeeEEe----ccccCCeeEE
Q psy3337 93 DSKEKNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDG--HLRLWSFPKMKPLLHI----EAHSKEIDDV 165 (297)
Q Consensus 93 ~~~d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~--~i~iwd~~~~~~~~~~----~~~~~~v~~~ 165 (297)
...++.|+. +..++....... .... .. ++|+|+++.|+++..++ .|.+|+...+.....+ ......+.++
T Consensus 148 d~~~~~I~~id~~~g~~~~~~~-~~~~-~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~i 224 (409)
T 3hrp_A 148 QRDDPRVRLISVDDNKVTTVHP-GFKG-GK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAV 224 (409)
T ss_dssp ETTTTEEEEEETTTTEEEEEEE-TCCB-CB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBC
T ss_pred ecCCCcEEEEECCCCEEEEeec-cCCC-Cc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhcCCcEEE
Confidence 334456666 665555444333 3222 23 99999999998888766 7888887655433333 2245668899
Q ss_pred EEccCCCEEEEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEE
Q psy3337 166 DFSISGEQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQ 245 (297)
Q Consensus 166 ~~sp~~~~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~ 245 (297)
+++|++..|+.+..++.|+.||+.++.. ..+......+.. ....+..++++|++..|+.+. ...+.|+.
T Consensus 225 av~p~~g~lyv~d~~~~I~~~d~~~~~~-~~~~~~~~~g~~---~~~P~~~ia~~p~~g~lyv~d-------~~~~~I~~ 293 (409)
T 3hrp_A 225 ALDETEEWLYFVDSNKNFGRFNVKTQEV-TLIKQLELSGSL---GTNPGPYLIYYFVDSNFYMSD-------QNLSSVYK 293 (409)
T ss_dssp EECTTSSEEEEECTTCEEEEEETTTCCE-EEEEECCCCSCC---CCSSCCEEEEETTTTEEEEEE-------TTTTEEEE
T ss_pred EEeCCCCeEEEEECCCcEEEEECCCCCE-EEEecccccCCC---CCCccccEEEeCCCCEEEEEe-------CCCCEEEE
Confidence 9999555555577788999999987653 222111000000 000011478899644455432 24789999
Q ss_pred EeCCCCceEEEeccC----------------CCeEEEEEcCCCCEEEEEe-cCCCeEEEEEeCCcee
Q psy3337 246 WDVDSGRLRLAREMK----------------ESLSALAVRDDGRFVAVGT-MFTGSVFVYIAFSLQM 295 (297)
Q Consensus 246 wd~~~~~~~~~~~~~----------------~~v~~~~~s~dg~~l~~~~-~~dg~i~vwd~~~~~~ 295 (297)
|+.... +..+.++ .....++++|+|+++++-. . ++.|+.|++.+++.
T Consensus 294 ~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~-~~~I~~~~~~~G~v 357 (409)
T 3hrp_A 294 ITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFK-GYCLRKLDILDGYV 357 (409)
T ss_dssp ECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTT-TCEEEEEETTTTEE
T ss_pred EecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCC-CCEEEEEECCCCEE
Confidence 998743 2222222 2378999999999777776 7 99999999776653
No 215
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.10 E-value=7.1e-09 Score=88.20 Aligned_cols=154 Identities=7% Similarity=-0.026 Sum_probs=103.4
Q ss_pred EecCCCEEEEEcC-----CCcEEEEeCCCCeeeEEeccccCCeeEEEEccCCCEEEEEe----------CCCcEEEEEcC
Q psy3337 125 LSRNGDLMVTGGT-----DGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIA----------KDGKAFVWNSK 189 (297)
Q Consensus 125 ~s~~g~~l~s~~~-----d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~----------~d~~v~lwd~~ 189 (297)
..|+++.++.... ++.|.++|..+++.+..+..-..+ . ++++||+++++++. .++.|.+||..
T Consensus 40 ~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~ 117 (386)
T 3sjl_D 40 PAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPV 117 (386)
T ss_dssp CCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTT
T ss_pred cCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECC
Confidence 3577777766654 679999999999998888754444 4 99999999888765 36789999999
Q ss_pred CCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCCCceEEEeccCCCeEEEEEc
Q psy3337 190 NGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSGRLRLAREMKESLSALAVR 269 (297)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~v~~~~~s 269 (297)
+.+.+..+...... ... ....-..++++|||++++.... ..++.|.++|+.+++.+..+..... ...+.
T Consensus 118 t~~v~~~I~v~~g~--r~~-~g~~P~~~a~spDGk~lyVan~------~~~~~VsVID~~t~~vv~tI~v~g~--~~~~P 186 (386)
T 3sjl_D 118 TLLPTADIELPDAP--RFL-VGTYPWMTSLTPDGKTLLFYQF------SPAPAVGVVDLEGKAFKRMLDVPDC--YHIFP 186 (386)
T ss_dssp TCCEEEEEEETTCC--CCC-BSCCGGGEEECTTSSEEEEEEC------SSSCEEEEEETTTTEEEEEEECCSE--EEEEE
T ss_pred CCeEEEEEECCCcc--ccc-cCCCCceEEEcCCCCEEEEEEc------CCCCeEEEEECCCCcEEEEEECCCc--ceeec
Confidence 99988877532100 000 0000113778999999988642 1257999999999999988865432 11222
Q ss_pred CCCCEEEEEecCCCeEEEEEeCC
Q psy3337 270 DDGRFVAVGTMFTGSVFVYIAFS 292 (297)
Q Consensus 270 ~dg~~l~~~~~~dg~i~vwd~~~ 292 (297)
...+.+++.+. ||.+.+.++.+
T Consensus 187 ~g~~~~~~~~~-DG~~~~v~~~~ 208 (386)
T 3sjl_D 187 TAPDTFFMHCR-DGSLAKVAFGT 208 (386)
T ss_dssp EETTEEEEEET-TSCEEEEECCS
T ss_pred CCCceeEEECC-CCCEEEEECCC
Confidence 23344445555 66666666544
No 216
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.10 E-value=3.4e-09 Score=98.04 Aligned_cols=167 Identities=13% Similarity=0.079 Sum_probs=106.0
Q ss_pred CCCCcEEEEEEecCCCEEEE-----EcCCCcEEEEeCCCCeeeEEeccccCCeeEEEEccCCCEEEEEeCCCc-------
Q psy3337 115 GSESLQRVVRLSRNGDLMVT-----GGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAKDGK------- 182 (297)
Q Consensus 115 ~h~~~v~~~~~s~~g~~l~s-----~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~d~~------- 182 (297)
+|...+..++|||||++||. |+....|++||+.+++.+... .+......++|+ |++.|+.++.+..
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~-~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~ 203 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETP-LKDVKFSGISWL-GNEGFFYSSYDKPDGSELSA 203 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEE-EEEEESCCCEEE-TTTEEEEEESSCCC------
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccc-cCCceeccEEEe-CCCEEEEEEecCcccccccc
Confidence 45557889999999998884 333357999999999865431 111113578999 9999998887743
Q ss_pred ------EEEEEcCCCceeeeeeccCCC-CceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCCCc-eE
Q psy3337 183 ------AFVWNSKNGSLSKELKWNTPD-NIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSGR-LR 254 (297)
Q Consensus 183 ------v~lwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~-~~ 254 (297)
|++|++.++.....+....+. ...+ +..+.++|||++|+.... .+.....|+++|+.++. ..
T Consensus 204 ~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~------~~~~~~SpDg~~l~~~~~----~~~~~~~i~~~d~~~~~~~~ 273 (693)
T 3iuj_A 204 RTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHR------YVGATVTEDDRFLLISAA----NSTSGNRLYVKDLSQENAPL 273 (693)
T ss_dssp -CCCCEEEEEETTSCGGGCEEEESCSGGGCCS------EEEEEECTTSCEEEEEEE----SSSSCCEEEEEETTSTTCCC
T ss_pred cCCCcEEEEEECCCCcccceEEEecCCCCCeE------EEEEEEcCCCCEEEEEEc----cCCCCcEEEEEECCCCCCce
Confidence 999998776432111111111 0011 123668999998866543 13345699999998753 33
Q ss_pred EEeccCCC-eEEEEEcCCCCEEEEEecCC---CeEEEEEeCCce
Q psy3337 255 LAREMKES-LSALAVRDDGRFVAVGTMFT---GSVFVYIAFSLQ 294 (297)
Q Consensus 255 ~~~~~~~~-v~~~~~s~dg~~l~~~~~~d---g~i~vwd~~~~~ 294 (297)
..+..+.. .... |+++|..|+..+..+ +.|.++|+.++.
T Consensus 274 ~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~ 316 (693)
T 3iuj_A 274 LTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPG 316 (693)
T ss_dssp EEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCC
T ss_pred EEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCC
Confidence 34444433 4444 677777665554313 579999987754
No 217
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.10 E-value=3.1e-08 Score=79.98 Aligned_cols=166 Identities=13% Similarity=0.062 Sum_probs=114.5
Q ss_pred CeEEEEecCCCCcEEEEEEecCCCEEEEEcC--CCcEEEEeCCCCeeeEEecccc-CCeeEEEEccCCCEEEE-EeCCCc
Q psy3337 107 DSVQTVFAGSESLQRVVRLSRNGDLMVTGGT--DGHLRLWSFPKMKPLLHIEAHS-KEIDDVDFSISGEQIVS-IAKDGK 182 (297)
Q Consensus 107 ~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~--d~~i~iwd~~~~~~~~~~~~~~-~~v~~~~~sp~~~~l~s-~~~d~~ 182 (297)
+.+.++..+.......+.|+|++.++++.+. ++.|.++|+.+++.+..+.-.. .....+++. +..|+. .-.++.
T Consensus 10 ~vv~~~p~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~ 87 (266)
T 2iwa_A 10 EVLNEFPHDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNI 87 (266)
T ss_dssp EEEEEEECCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSE
T ss_pred eEEEEEECCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCE
Confidence 4456664333345689999998755555443 6799999999999888765222 223355554 445544 446789
Q ss_pred EEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCCCceEEEeccCC-
Q psy3337 183 AFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSGRLRLAREMKE- 261 (297)
Q Consensus 183 v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~- 261 (297)
+.++|..+.+.+.++....+.+ +.+++|++.++.... ++.|.++|..+.+.+..+....
T Consensus 88 v~viD~~t~~v~~~i~~g~~~g------------~glt~Dg~~l~vs~g--------s~~l~viD~~t~~v~~~I~Vg~~ 147 (266)
T 2iwa_A 88 GFIYDRRTLSNIKNFTHQMKDG------------WGLATDGKILYGSDG--------TSILYEIDPHTFKLIKKHNVKYN 147 (266)
T ss_dssp EEEEETTTTEEEEEEECCSSSC------------CEEEECSSSEEEECS--------SSEEEEECTTTCCEEEEEECEET
T ss_pred EEEEECCCCcEEEEEECCCCCe------------EEEEECCCEEEEECC--------CCeEEEEECCCCcEEEEEEECCC
Confidence 9999999999888875432222 224667887876433 7899999999988887776421
Q ss_pred -----CeEEEEEcCCCCEEEEEecCCCeEEEEEeCCceec
Q psy3337 262 -----SLSALAVRDDGRFVAVGTMFTGSVFVYIAFSLQMC 296 (297)
Q Consensus 262 -----~v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~~~~~ 296 (297)
.+..+.|. +|+..+.... ++.|.+.|+.+++.+
T Consensus 148 ~~p~~~~nele~~-dg~lyvn~~~-~~~V~vID~~tg~V~ 185 (266)
T 2iwa_A 148 GHRVIRLNELEYI-NGEVWANIWQ-TDCIARISAKDGTLL 185 (266)
T ss_dssp TEECCCEEEEEEE-TTEEEEEETT-SSEEEEEETTTCCEE
T ss_pred CcccccceeEEEE-CCEEEEecCC-CCeEEEEECCCCcEE
Confidence 26788888 7754444445 889999999998865
No 218
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.09 E-value=2.8e-11 Score=103.54 Aligned_cols=146 Identities=13% Similarity=0.119 Sum_probs=82.2
Q ss_pred CCCEEEEEcCCCcEEEEeCCCCeeeEEeccccCCeeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeeccCCCCceE
Q psy3337 128 NGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKY 207 (297)
Q Consensus 128 ~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~ 207 (297)
++..+++++.|+.|+.||..+|+.+..+.. ..+.+..+.+++..+++++.|+.|+.||..+|+.+..+..+.+..
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~--- 82 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPEL--- 82 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHH---
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccc---
Confidence 567899999999999999999999988876 456666666778788888899999999999888766554321110
Q ss_pred EEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCCCceEEEeccCCCeEEEEEcCCCCEEEEEecCCCeEEE
Q psy3337 208 LFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSGRLRLAREMKESLSALAVRDDGRFVAVGTMFTGSVFV 287 (297)
Q Consensus 208 ~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~dg~i~v 287 (297)
. .. ..... ++..+++ |+.++.|+.||..+|+.+..+..+.. ..++|++..|++++. |+.|+.
T Consensus 83 ~-~~----sp~~~-~~~~v~~--------g~~dg~v~a~D~~tG~~~w~~~~~~~---~~~~p~~~~v~~~~~-dg~v~a 144 (369)
T 2hz6_A 83 V-QA----SPCRS-SDGILYM--------GKKQDIWYVIDLLTGEKQQTLSSAFA---DSLSPSTSLLYLGRT-EYTITM 144 (369)
T ss_dssp H-TT----CSCC------CCC--------CEEEEEEEEECCC-------------------------EEEEEE-EEEEEC
T ss_pred c-cc----CceEe-cCCEEEE--------EeCCCEEEEEECCCCcEEEEecCCCc---ccccccCCEEEEEec-CCEEEE
Confidence 0 00 00011 2333444 45589999999999998877765542 345678889999998 999999
Q ss_pred EEeCCceec
Q psy3337 288 YIAFSLQMC 296 (297)
Q Consensus 288 wd~~~~~~~ 296 (297)
||..+++.+
T Consensus 145 ~d~~tG~~~ 153 (369)
T 2hz6_A 145 YDTKTRELR 153 (369)
T ss_dssp CCSSSSSCC
T ss_pred EECCCCCEE
Confidence 999998754
No 219
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.09 E-value=6.7e-09 Score=95.83 Aligned_cols=201 Identities=12% Similarity=0.132 Sum_probs=135.0
Q ss_pred CCceEEE-EeeCCCeEEEEecC-CC-----------------------------CcEEEEEEecCCCEEEEEcCCCc---
Q psy3337 95 KEKNLRF-GFKTFDSVQTVFAG-SE-----------------------------SLQRVVRLSRNGDLMVTGGTDGH--- 140 (297)
Q Consensus 95 ~d~~i~~-~~~~~~~~~~~~~~-h~-----------------------------~~v~~~~~s~~g~~l~s~~~d~~--- 140 (297)
.++.|+. |..+|+.+-.+... +. .....++++|++.+++.+..++.
T Consensus 181 ~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~ 260 (689)
T 1yiq_A 181 VRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWD 260 (689)
T ss_dssp CBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSC
T ss_pred CCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccc
Confidence 3678887 99999988766511 10 00125788998889998887763
Q ss_pred ----------------EEEEeCCCCeeeEEecc--cc-------CCeeEEEEccCCC---EEEEEeCCCcEEEEEcCCCc
Q psy3337 141 ----------------LRLWSFPKMKPLLHIEA--HS-------KEIDDVDFSISGE---QIVSIAKDGKAFVWNSKNGS 192 (297)
Q Consensus 141 ----------------i~iwd~~~~~~~~~~~~--~~-------~~v~~~~~sp~~~---~l~s~~~d~~v~lwd~~~~~ 192 (297)
|..||..+|+.+..++. |. ..+.......+|+ .++.++.+|.++++|..+|+
T Consensus 261 ~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~ 340 (689)
T 1yiq_A 261 PKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGE 340 (689)
T ss_dssp HHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCC
T ss_pred cCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCC
Confidence 99999999999887764 21 1122222223554 78889999999999999999
Q ss_pred eeeeeeccC------------------------CCCceEEEEee-----eeeeeeeCCCCeEEEEeccCc----------
Q psy3337 193 LSKELKWNT------------------------PDNIKYLFKRC-----RYGLVEDSPKRSRLFTLANPL---------- 233 (297)
Q Consensus 193 ~~~~~~~~~------------------------~~~~~~~~~~~-----~~~~~~~s~~~~~l~~~~~~~---------- 233 (297)
.+....... +.......... .+..++++|+...+++.....
T Consensus 341 ~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~ 420 (689)
T 1yiq_A 341 LLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEA 420 (689)
T ss_dssp EEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSC
T ss_pred EeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeecccc
Confidence 875433211 00001111110 123477888888777653310
Q ss_pred ---------cccc------------------CCCCeEEEEeCCCCceEEEeccCCCeEEEEEcCCCCEEEEEecCCCeEE
Q psy3337 234 ---------AQNK------------------RGISYVQQWDVDSGRLRLAREMKESLSALAVRDDGRFVAVGTMFTGSVF 286 (297)
Q Consensus 234 ---------~~~g------------------~~d~~i~~wd~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~dg~i~ 286 (297)
...| ..++.|..||+.+|+.+-.+..+..+....++..+..+++|+. ||.|+
T Consensus 421 ~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~gt~-dg~l~ 499 (689)
T 1yiq_A 421 PKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTIFNGGTLSTAGNLVFEGSA-DGRVI 499 (689)
T ss_dssp CCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECT-TSEEE
T ss_pred ccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCCccCccceECCCEEEEECC-CCcEE
Confidence 0001 1248899999999999988877665554566778889999999 99999
Q ss_pred EEEeCCceec
Q psy3337 287 VYIAFSLQMC 296 (297)
Q Consensus 287 vwd~~~~~~~ 296 (297)
.||..+|+.|
T Consensus 500 a~D~~tG~~l 509 (689)
T 1yiq_A 500 AYAADTGEKL 509 (689)
T ss_dssp EEETTTCCEE
T ss_pred EEECCCCccc
Confidence 9999999875
No 220
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.07 E-value=7.7e-08 Score=80.60 Aligned_cols=176 Identities=13% Similarity=0.088 Sum_probs=111.1
Q ss_pred CCCCceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCeeeEEecc----ccCCeeEEEE
Q psy3337 93 DSKEKNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEA----HSKEIDDVDF 167 (297)
Q Consensus 93 ~~~d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~----~~~~v~~~~~ 167 (297)
+..++.|.. +..+++. ..+. ....+.+++|+|+|+++++. .+ .|.+||..+++....... ....+.++++
T Consensus 67 d~~~~~i~~~d~~~~~~-~~~~--~~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~ 141 (326)
T 2ghs_A 67 NILERELHELHLASGRK-TVHA--LPFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTLHAELESDLPGNRSNDGRM 141 (326)
T ss_dssp EGGGTEEEEEETTTTEE-EEEE--CSSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEEEECSSTTCTTEEEEEEEE
T ss_pred ECCCCEEEEEECCCCcE-EEEE--CCCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEEEEeeCCCCCCCCCCCCEEE
Confidence 334556666 6665543 3332 34578999999999877765 34 499999887764322211 1235889999
Q ss_pred ccCCCEEEEEeC------CCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCC
Q psy3337 168 SISGEQIVSIAK------DGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGIS 241 (297)
Q Consensus 168 sp~~~~l~s~~~------d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~ 241 (297)
+|+|+++++... .+.|..++ +++.. .+... ......++|+|+++.++.+. +.++
T Consensus 142 d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~-~~~~~----------~~~~~~i~~s~dg~~lyv~~-------~~~~ 201 (326)
T 2ghs_A 142 HPSGALWIGTMGRKAETGAGSIYHVA--KGKVT-KLFAD----------ISIPNSICFSPDGTTGYFVD-------TKVN 201 (326)
T ss_dssp CTTSCEEEEEEETTCCTTCEEEEEEE--TTEEE-EEEEE----------ESSEEEEEECTTSCEEEEEE-------TTTC
T ss_pred CCCCCEEEEeCCCcCCCCceEEEEEe--CCcEE-EeeCC----------CcccCCeEEcCCCCEEEEEE-------CCCC
Confidence 999997775542 24555555 44332 22111 01123578999998877653 2368
Q ss_pred eEEEEeCC--CC-c-----eEEEeccCCC-eEEEEEcCCCCEEEEEecCCCeEEEEEeCCcee
Q psy3337 242 YVQQWDVD--SG-R-----LRLAREMKES-LSALAVRDDGRFVAVGTMFTGSVFVYIAFSLQM 295 (297)
Q Consensus 242 ~i~~wd~~--~~-~-----~~~~~~~~~~-v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~~~~ 295 (297)
.|.+||+. ++ + ....+..... +..++++++|.+.++... ++.|.+||. +++.
T Consensus 202 ~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~-~~~v~~~d~-~g~~ 262 (326)
T 2ghs_A 202 RLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWG-EGAVDRYDT-DGNH 262 (326)
T ss_dssp EEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEET-TTEEEEECT-TCCE
T ss_pred EEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeC-CCEEEEECC-CCCE
Confidence 99999986 55 3 2223332233 789999999987777766 789999997 4443
No 221
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.05 E-value=2.6e-08 Score=88.53 Aligned_cols=182 Identities=11% Similarity=0.038 Sum_probs=126.3
Q ss_pred CCCCCCceEEE-EeeCCCeEEEEecCCCCcEEEEEE-e-cCCCEEEEEc------------------CCCcEEEEeCCCC
Q psy3337 91 SIDSKEKNLRF-GFKTFDSVQTVFAGSESLQRVVRL-S-RNGDLMVTGG------------------TDGHLRLWSFPKM 149 (297)
Q Consensus 91 ~~~~~d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~-s-~~g~~l~s~~------------------~d~~i~iwd~~~~ 149 (297)
.....+..|.+ |+.+.++...+..........+++ + |+++++++++ .++.+.+.|..+.
T Consensus 106 Vnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~ 185 (595)
T 1fwx_A 106 MNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKW 185 (595)
T ss_dssp EEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTT
T ss_pred EEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCC
Confidence 34445556766 888888777554233345678888 5 9999998884 3467999999999
Q ss_pred eeeEEeccccCCeeEEEEccCCCEEEEEeCCC--------------------------------------cEEEEEcCC-
Q psy3337 150 KPLLHIEAHSKEIDDVDFSISGEQIVSIAKDG--------------------------------------KAFVWNSKN- 190 (297)
Q Consensus 150 ~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~d~--------------------------------------~v~lwd~~~- 190 (297)
+.+.++.--. ....++++|+|+++++.+.+. .|.+.|.++
T Consensus 186 ~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~ 264 (595)
T 1fwx_A 186 EVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKE 264 (595)
T ss_dssp EEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGG
T ss_pred eEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCccc
Confidence 8887776322 457788999999999887553 234444443
Q ss_pred -Cce-eeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCCCc------------eEEE
Q psy3337 191 -GSL-SKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSGR------------LRLA 256 (297)
Q Consensus 191 -~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~------------~~~~ 256 (297)
++. +..+.. ...-..+.++|||++++.... .+.+|.++|+.+.+ .+..
T Consensus 265 ~~~~~~~~Ipv-----------g~~PhGv~~sPDGk~v~V~~~-------~s~~VsVid~~~~~~~~~~~l~~~~~v~~~ 326 (595)
T 1fwx_A 265 ASSLFTRYIPI-----------ANNPHGCNMAPDKKHLCVAGK-------LSPTVTVLDVTRFDAVFYENADPRSAVVAE 326 (595)
T ss_dssp GCCSSEEEEEE-----------ESSCCCEEECTTSSEEEEECT-------TSSBEEEEEGGGHHHHHHSCCCGGGGEEEC
T ss_pred CCceeEEEEec-----------CCCceEEEEcCCCCEEEEeCC-------CCCeEEEEECcccccccccccCcccceEEE
Confidence 222 122211 111224788999999988643 57899999999653 4556
Q ss_pred eccCCCeEEEEEcCCCCEEEEEecCCCeEEEEEeCC
Q psy3337 257 REMKESLSALAVRDDGRFVAVGTMFTGSVFVYIAFS 292 (297)
Q Consensus 257 ~~~~~~v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~ 292 (297)
+........++|+|+| ++.+....|+.|.+||+.+
T Consensus 327 v~vG~gP~h~aF~~dG-~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 327 PELGLGPLHTAFDGRG-NAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp CBCCSCEEEEEECTTS-EEEEEETTTTEEEEEEHHH
T ss_pred cCCCCCcceEEECCCC-eEEEEEecCCcEEEEEhhH
Confidence 6555669999999999 6665555599999999876
No 222
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.03 E-value=3.5e-07 Score=75.46 Aligned_cols=164 Identities=12% Similarity=0.011 Sum_probs=103.6
Q ss_pred CCCCcEEEEEEecCC-CEEEEEcCCCcEEEEeCCCCeeeEEeccccCCeeEEEEccCCCEEEEEeCCCcEEEEEcCCCce
Q psy3337 115 GSESLQRVVRLSRNG-DLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAKDGKAFVWNSKNGSL 193 (297)
Q Consensus 115 ~h~~~v~~~~~s~~g-~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~d~~v~lwd~~~~~~ 193 (297)
.+.....+..|+|++ .++++...++.|..||..+++. ..+. ....+.+++++|+++++++ . +..|.+||..+++.
T Consensus 10 ~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~-~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~ 85 (297)
T 3g4e_A 10 ENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRVT-MDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQSA 85 (297)
T ss_dssp CCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEEE-CSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTEE
T ss_pred cCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EEEe-CCCceEEEEECCCCCEEEE-E-CCeEEEEECCCCcE
Confidence 344455689999964 5667777789999999987654 2332 3567999999999995554 3 56799999987764
Q ss_pred eeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCccc---ccCCCCeEEEEeCCCCceEEEeccCCCeEEEEEcC
Q psy3337 194 SKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQ---NKRGISYVQQWDVDSGRLRLAREMKESLSALAVRD 270 (297)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~---~g~~d~~i~~wd~~~~~~~~~~~~~~~v~~~~~s~ 270 (297)
....... +.. . ...+..++++|+|+.+++....... .....+.|+.++.. ++.............++|+|
T Consensus 86 ~~~~~~~-~~~-~----~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~~~~~~~~~~pngi~~sp 158 (297)
T 3g4e_A 86 VVLATVD-NDK-K----NNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-HHVKKYFDQVDISNGLDWSL 158 (297)
T ss_dssp EEEEECC-TTC-S----SEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-SCEEEEEEEESBEEEEEECT
T ss_pred EEEEecC-CCC-C----CCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC-CCEEEEeeccccccceEEcC
Confidence 3222211 110 0 1234458889999966654220000 00123455555554 44443333333478999999
Q ss_pred CCCEEEEE-ecCCCeEEEEEe
Q psy3337 271 DGRFVAVG-TMFTGSVFVYIA 290 (297)
Q Consensus 271 dg~~l~~~-~~~dg~i~vwd~ 290 (297)
|++.|+.+ +. ++.|.+|++
T Consensus 159 dg~~lyv~~~~-~~~i~~~~~ 178 (297)
T 3g4e_A 159 DHKIFYYIDSL-SYSVDAFDY 178 (297)
T ss_dssp TSCEEEEEEGG-GTEEEEEEE
T ss_pred CCCEEEEecCC-CCcEEEEec
Confidence 99877554 45 789999997
No 223
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.02 E-value=4.3e-08 Score=83.73 Aligned_cols=153 Identities=7% Similarity=-0.050 Sum_probs=104.5
Q ss_pred ecCCCEEEEEcC--CC---cEEEEeCCCCeeeEEeccccCCeeEEEEccCCCEEEEEe----------CCCcEEEEEcCC
Q psy3337 126 SRNGDLMVTGGT--DG---HLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIA----------KDGKAFVWNSKN 190 (297)
Q Consensus 126 s~~g~~l~s~~~--d~---~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~----------~d~~v~lwd~~~ 190 (297)
.|++++++.... .. .|.+||..+++.+..+.....+ .++++||+++++.+. .++.|.+||..+
T Consensus 29 ~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t 106 (373)
T 2mad_H 29 GADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVT 106 (373)
T ss_pred CCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCC
Confidence 466766666543 22 7899999999988877654433 999999999998875 367899999998
Q ss_pred CceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCCCceEEE-eccCCCeEEEEEc
Q psy3337 191 GSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSGRLRLA-REMKESLSALAVR 269 (297)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~-~~~~~~v~~~~~s 269 (297)
.+.+..+....+. ... ....-..+.++|||++|+.+.. ..+..|.++| .+++.+.. +..... +.+.
T Consensus 107 ~~~~~~i~~~~~~--~~~-~g~~p~~~~~spDG~~l~v~n~------~~~~~v~viD-~t~~~~~~~i~~~~~---~~~~ 173 (373)
T 2mad_H 107 FLPIADIELPDAP--RFD-VGPYSWMNANTPNNADLLFFQF------AAGPAVGLVV-QGGSSDDQLLSSPTC---YHIH 173 (373)
T ss_pred CcEEEEEECCCcc--ccc-cCCCccceEECCCCCEEEEEec------CCCCeEEEEE-CCCCEEeEEcCCCce---EEEE
Confidence 8887776532100 000 0000113778999999998653 1247899999 99998877 655432 4455
Q ss_pred CCC-CEEEEEecCCCeEEEEEeCCcee
Q psy3337 270 DDG-RFVAVGTMFTGSVFVYIAFSLQM 295 (297)
Q Consensus 270 ~dg-~~l~~~~~~dg~i~vwd~~~~~~ 295 (297)
|++ +.+++.+. ||.+.+||. +++.
T Consensus 174 ~~~~~~~~~~~~-dg~~~~vd~-~g~~ 198 (373)
T 2mad_H 174 PGAPSTFYLLCA-QGGLAKTDH-AGGA 198 (373)
T ss_pred eCCCceEEEEcC-CCCEEEEEC-CCcE
Confidence 655 34455566 889988888 6654
No 224
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.01 E-value=2.3e-08 Score=92.10 Aligned_cols=200 Identities=15% Similarity=0.160 Sum_probs=135.6
Q ss_pred CceEEE-EeeCCCeEEEEecCCCC-------------------------------cEEEEEEecCCCEEEEEcCCC----
Q psy3337 96 EKNLRF-GFKTFDSVQTVFAGSES-------------------------------LQRVVRLSRNGDLMVTGGTDG---- 139 (297)
Q Consensus 96 d~~i~~-~~~~~~~~~~~~~~h~~-------------------------------~v~~~~~s~~g~~l~s~~~d~---- 139 (297)
++.|+. |..+|+.+-.+...... ....++++|++..++.+..++
T Consensus 189 ~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~ 268 (677)
T 1kb0_A 189 RGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWS 268 (677)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSC
T ss_pred CCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCcccc
Confidence 678888 99999988777621111 012578899988888887664
Q ss_pred ---------------cEEEEeCCCCeeeEEecc--cc-------CCeeEEEEccCC---CEEEEEeCCCcEEEEEcCCCc
Q psy3337 140 ---------------HLRLWSFPKMKPLLHIEA--HS-------KEIDDVDFSISG---EQIVSIAKDGKAFVWNSKNGS 192 (297)
Q Consensus 140 ---------------~i~iwd~~~~~~~~~~~~--~~-------~~v~~~~~sp~~---~~l~s~~~d~~v~lwd~~~~~ 192 (297)
.|..+|..+++.+..++. |. ....-+....+| ..++.++.+|.++++|..+|+
T Consensus 269 ~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~ 348 (677)
T 1kb0_A 269 HKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGK 348 (677)
T ss_dssp HHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCC
T ss_pred CCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCC
Confidence 499999999998877653 21 112223333467 678899999999999999999
Q ss_pred eeeeeeccCCC-------CceEEE-------------Ee-----eeeeeeeeCCCCeEEEEeccCc--c-------ccc-
Q psy3337 193 LSKELKWNTPD-------NIKYLF-------------KR-----CRYGLVEDSPKRSRLFTLANPL--A-------QNK- 237 (297)
Q Consensus 193 ~~~~~~~~~~~-------~~~~~~-------------~~-----~~~~~~~~s~~~~~l~~~~~~~--~-------~~g- 237 (297)
.+..+...... .....+ .. ..+..++++|++..+++..... . ..|
T Consensus 349 ~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~ 428 (677)
T 1kb0_A 349 FISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQ 428 (677)
T ss_dssp EEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTC
T ss_pred EeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeeccccccccc
Confidence 88766532100 000000 00 0112467889888777753310 0 000
Q ss_pred -------------------------CCCCeEEEEeCCCCceEEEeccCCCeEEEEEcCCCCEEEEEecCCCeEEEEEeCC
Q psy3337 238 -------------------------RGISYVQQWDVDSGRLRLAREMKESLSALAVRDDGRFVAVGTMFTGSVFVYIAFS 292 (297)
Q Consensus 238 -------------------------~~d~~i~~wd~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~ 292 (297)
...+.|..||+.+++.+-.+.....+.+..++.++..+++++. ||.+++||+.+
T Consensus 429 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~~~g~~v~~g~~-dg~l~a~D~~t 507 (677)
T 1kb0_A 429 AGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSPWNGGTLTTAGNVVFQGTA-DGRLVAYHAAT 507 (677)
T ss_dssp CCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECT-TSEEEEEETTT
T ss_pred ccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCCCCCcCcceEeCCCEEEEECC-CCcEEEEECCC
Confidence 0237899999999999888776555556667778888999998 99999999999
Q ss_pred ceec
Q psy3337 293 LQMC 296 (297)
Q Consensus 293 ~~~~ 296 (297)
++.+
T Consensus 508 G~~l 511 (677)
T 1kb0_A 508 GEKL 511 (677)
T ss_dssp CCEE
T ss_pred Ccee
Confidence 9875
No 225
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.99 E-value=3.4e-07 Score=74.99 Aligned_cols=174 Identities=10% Similarity=0.038 Sum_probs=115.7
Q ss_pred CCceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCeee-EEeccccCCeeEEEEccCCC
Q psy3337 95 KEKNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPL-LHIEAHSKEIDDVDFSISGE 172 (297)
Q Consensus 95 ~d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~-~~~~~~~~~v~~~~~sp~~~ 172 (297)
.++.|.+ +.. ++........+...+.+++++++|+++++...++.|..||.. ++.. ..+......+.++++.++++
T Consensus 39 ~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~ 116 (300)
T 2qc5_A 39 KANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGD 116 (300)
T ss_dssp TTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTC
T ss_pred CCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEEecCCCCCCCCccceECCCCC
Confidence 3455555 555 444332222344678899999999988887778899999987 5543 22232346789999999999
Q ss_pred EEEEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCCCc
Q psy3337 173 QIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSGR 252 (297)
Q Consensus 173 ~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~ 252 (297)
++++...++.|..||.. ++.. .+...... . ....+++.+++..+++.. ..+.|..||. +++
T Consensus 117 l~v~~~~~~~i~~~~~~-g~~~-~~~~~~~~--~------~~~~i~~d~~g~l~v~~~--------~~~~i~~~~~-~g~ 177 (300)
T 2qc5_A 117 IWFTQLNGDRIGKLTAD-GTIY-EYDLPNKG--S------YPAFITLGSDNALWFTEN--------QNNSIGRITN-TGK 177 (300)
T ss_dssp EEEEETTTTEEEEECTT-SCEE-EEECSSTT--C------CEEEEEECTTSSEEEEET--------TTTEEEEECT-TCC
T ss_pred EEEEccCCCeEEEECCC-CCEE-EccCCCCC--C------CceeEEECCCCCEEEEec--------CCCeEEEECC-CCc
Confidence 88887778899999986 5443 22211111 1 123467889998555533 2678999998 555
Q ss_pred eEEE-eccCC-CeEEEEEcCCCCEEEEEecCCCeEEEEEe
Q psy3337 253 LRLA-REMKE-SLSALAVRDDGRFVAVGTMFTGSVFVYIA 290 (297)
Q Consensus 253 ~~~~-~~~~~-~v~~~~~s~dg~~l~~~~~~dg~i~vwd~ 290 (297)
.... ..... .+..++++++|.+.++... .+.|.+||.
T Consensus 178 ~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~-~~~i~~~~~ 216 (300)
T 2qc5_A 178 LEEYPLPTNAAAPVGITSGNDGALWFVEIM-GNKIGRITT 216 (300)
T ss_dssp EEEEECSSTTCCEEEEEECTTSSEEEEETT-TTEEEEECT
T ss_pred EEEeeCCCCCCCcceEEECCCCCEEEEccC-CCEEEEEcC
Confidence 4432 22222 3899999999987777666 778999987
No 226
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.98 E-value=7.9e-08 Score=76.84 Aligned_cols=163 Identities=12% Similarity=0.098 Sum_probs=113.8
Q ss_pred CeEEEEecCCCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCeeeEEeccccCCee--EEEEccCCCEEEEEeCCCcEE
Q psy3337 107 DSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEID--DVDFSISGEQIVSIAKDGKAF 184 (297)
Q Consensus 107 ~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~--~~~~sp~~~~l~s~~~d~~v~ 184 (297)
+.+.++..+.......+.|+ ++.++.+.+.+|.|+++|+.+++.+..+ -. .... .+++..+ ++++..-.++.+.
T Consensus 44 ~Vv~~~phd~~~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~-~~~FgeGit~~g~-~Ly~ltw~~~~v~ 119 (268)
T 3nok_A 44 HIIREYPHATNAFTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-RL-GNIFAEGLASDGE-RLYQLTWTEGLLF 119 (268)
T ss_dssp EEEEEEECCTTCCEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-EC-TTCCEEEEEECSS-CEEEEESSSCEEE
T ss_pred EEEEEEcCCCccccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-CC-CCcceeEEEEeCC-EEEEEEccCCEEE
Confidence 44566643445566788887 4567778888899999999999988776 22 2333 3555432 3444445688999
Q ss_pred EEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCCCceEEEeccCC---
Q psy3337 185 VWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSGRLRLAREMKE--- 261 (297)
Q Consensus 185 lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~--- 261 (297)
+||..+.+.+.++... +.+ ..++++++.|+.... ++.|.++|..+.+.+..+....
T Consensus 120 V~D~~Tl~~~~ti~~~-~eG------------wGLt~Dg~~L~vSdG--------s~~l~~iDp~T~~v~~~I~V~~~g~ 178 (268)
T 3nok_A 120 TWSGMPPQRERTTRYS-GEG------------WGLCYWNGKLVRSDG--------GTMLTFHEPDGFALVGAVQVKLRGQ 178 (268)
T ss_dssp EEETTTTEEEEEEECS-SCC------------CCEEEETTEEEEECS--------SSEEEEECTTTCCEEEEEECEETTE
T ss_pred EEECCcCcEEEEEeCC-Cce------------eEEecCCCEEEEECC--------CCEEEEEcCCCCeEEEEEEeCCCCc
Confidence 9999999999888753 221 223456777777443 7899999999998888776522
Q ss_pred ---CeEEEEEcCCCCEEEEEecCCCeEEEEEeCCceec
Q psy3337 262 ---SLSALAVRDDGRFVAVGTMFTGSVFVYIAFSLQMC 296 (297)
Q Consensus 262 ---~v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~~~~~ 296 (297)
.++.+.|. +|+..+..-. +..|.+.|..+++.+
T Consensus 179 ~v~~lNeLe~~-dG~lyanvw~-s~~I~vIDp~TG~V~ 214 (268)
T 3nok_A 179 PVELINELECA-NGVIYANIWH-SSDVLEIDPATGTVV 214 (268)
T ss_dssp ECCCEEEEEEE-TTEEEEEETT-CSEEEEECTTTCBEE
T ss_pred ccccccccEEe-CCEEEEEECC-CCeEEEEeCCCCcEE
Confidence 25667776 7764444445 889999999999865
No 227
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.97 E-value=5.6e-08 Score=80.58 Aligned_cols=149 Identities=9% Similarity=-0.029 Sum_probs=97.8
Q ss_pred cEEEEEEecCCCEEEE----EcC-------------CCcEEEEeCCCCeeeEEeccccCCeeEEEEccCCCEEEEEeCC-
Q psy3337 119 LQRVVRLSRNGDLMVT----GGT-------------DGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAKD- 180 (297)
Q Consensus 119 ~v~~~~~s~~g~~l~s----~~~-------------d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~d- 180 (297)
.+..++++|+|+++++ |.. .+.|+.||..+++..... .......++|+|+++.|+.+...
T Consensus 132 ~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl~~spdg~~lyv~~~~~ 209 (305)
T 3dr2_A 132 SPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHPNGLAFSPDEQTLYVSQTPE 209 (305)
T ss_dssp CCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSEEEEEECTTSSEEEEEECCC
T ss_pred CCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCCCcceEEcCCCCEEEEEecCC
Confidence 3567999999998886 332 256788887666644333 44567889999999988777665
Q ss_pred -----CcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCCCceEE
Q psy3337 181 -----GKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSGRLRL 255 (297)
Q Consensus 181 -----~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~~~ 255 (297)
+.|.+||+..+. +........ ........++++++|...++ . .+.|.+|+.. ++.+.
T Consensus 210 ~~~~~~~i~~~~~~~~~-l~~~~~~~~------~~~~~pdgi~~d~~G~lwv~-~---------~~gv~~~~~~-g~~~~ 271 (305)
T 3dr2_A 210 QGHGSVEITAFAWRDGA-LHDRRHFAS------VPDGLPDGFCVDRGGWLWSS-S---------GTGVCVFDSD-GQLLG 271 (305)
T ss_dssp ---CCCEEEEEEEETTE-EEEEEEEEC------CSSSCCCSEEECTTSCEEEC-C---------SSEEEEECTT-SCEEE
T ss_pred cCCCCCEEEEEEecCCC-ccCCeEEEE------CCCCCCCeEEECCCCCEEEe-c---------CCcEEEECCC-CCEEE
Confidence 689999987543 211100000 00001123667889984433 2 2359999984 77777
Q ss_pred EeccCCCeEEEEEcCCCCEEEEEecCCCeEEEEE
Q psy3337 256 AREMKESLSALAVRDDGRFVAVGTMFTGSVFVYI 289 (297)
Q Consensus 256 ~~~~~~~v~~~~~s~dg~~l~~~~~~dg~i~vwd 289 (297)
.+..+..+.+++|+|+++.|+.++. ++ +..++
T Consensus 272 ~~~~~~~~~~~~f~~d~~~L~it~~-~~-l~~~~ 303 (305)
T 3dr2_A 272 HIPTPGTASNCTFDQAQQRLFITGG-PC-LWMLP 303 (305)
T ss_dssp EEECSSCCCEEEECTTSCEEEEEET-TE-EEEEE
T ss_pred EEECCCceeEEEEeCCCCEEEEEcC-Ce-EEEEE
Confidence 7776666899999999999998886 54 44434
No 228
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.97 E-value=4.1e-07 Score=76.15 Aligned_cols=161 Identities=9% Similarity=-0.049 Sum_probs=103.1
Q ss_pred cEEEEEEecCC-CEEEEEcCCCcEEEEeCCCCeeeEEeccccCCeeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeee
Q psy3337 119 LQRVVRLSRNG-DLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAKDGKAFVWNSKNGSLSKEL 197 (297)
Q Consensus 119 ~v~~~~~s~~g-~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~d~~v~lwd~~~~~~~~~~ 197 (297)
...+..|+|++ .++++...++.|..||..+++.. .+. ....+.+++|+|+++++++. .+ .|.+||..+++... +
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~-~~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~~-~ 124 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLASGRKT-VHA-LPFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTL-H 124 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEE-CSSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEE-E
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEE-CCCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEEE-E
Confidence 45688999975 56667777889999999877643 332 34579999999999877764 44 49999998776532 2
Q ss_pred eccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCCCceEEEeccCCCeEEEEEcCCCCEEEE
Q psy3337 198 KWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSGRLRLAREMKESLSALAVRDDGRFVAV 277 (297)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~ 277 (297)
....... ....+..+.++|+|..+++..... .....+.|+.++ +++.............++|+|||+.|+.
T Consensus 125 ~~~~~~~-----~~~~~~~i~~d~~G~l~v~~~~~~--~~~~~~~l~~~~--~g~~~~~~~~~~~~~~i~~s~dg~~lyv 195 (326)
T 2ghs_A 125 AELESDL-----PGNRSNDGRMHPSGALWIGTMGRK--AETGAGSIYHVA--KGKVTKLFADISIPNSICFSPDGTTGYF 195 (326)
T ss_dssp ECSSTTC-----TTEEEEEEEECTTSCEEEEEEETT--CCTTCEEEEEEE--TTEEEEEEEEESSEEEEEECTTSCEEEE
T ss_pred eeCCCCC-----CCCCCCCEEECCCCCEEEEeCCCc--CCCCceEEEEEe--CCcEEEeeCCCcccCCeEEcCCCCEEEE
Confidence 2111100 012344578899998665532100 000135677777 4554433332234789999999987765
Q ss_pred EecCCCeEEEEEeC--Cc
Q psy3337 278 GTMFTGSVFVYIAF--SL 293 (297)
Q Consensus 278 ~~~~dg~i~vwd~~--~~ 293 (297)
+...++.|.+||+. ++
T Consensus 196 ~~~~~~~I~~~d~~~~~G 213 (326)
T 2ghs_A 196 VDTKVNRLMRVPLDARTG 213 (326)
T ss_dssp EETTTCEEEEEEBCTTTC
T ss_pred EECCCCEEEEEEcccccC
Confidence 54327899999985 55
No 229
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.95 E-value=1.5e-07 Score=75.17 Aligned_cols=165 Identities=18% Similarity=0.168 Sum_probs=113.9
Q ss_pred CeEEEEecCCCCcEEEEEEecCCCEEEEEcCCC--cEEEEeCCCCeeeEEeccccCCeeEEEEccCCCEEEEEe-CCCcE
Q psy3337 107 DSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDG--HLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIA-KDGKA 183 (297)
Q Consensus 107 ~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~--~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~-~d~~v 183 (297)
+.+.++..+.......+.|+ ++.++.+.+.+| .|+.+|+.+++.+..+.-.. ........+++..|+... .++.+
T Consensus 32 ~vv~~~phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~-~~FgeGit~~g~~ly~ltw~~~~v 109 (262)
T 3nol_A 32 QIVHSYPHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGK-RYFGEGISDWKDKIVGLTWKNGLG 109 (262)
T ss_dssp EEEEEEECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCT-TCCEEEEEEETTEEEEEESSSSEE
T ss_pred EEEEEecCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCC-ccceeEEEEeCCEEEEEEeeCCEE
Confidence 34555543445556889998 676667777766 89999999999888775433 333333333455555554 58899
Q ss_pred EEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCCCceEEEeccC---
Q psy3337 184 FVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSGRLRLAREMK--- 260 (297)
Q Consensus 184 ~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~--- 260 (297)
.+||..+.+.+.++.... .+ ..+++++..|+.... +..|.++|..+.+.+..+...
T Consensus 110 ~v~D~~t~~~~~ti~~~~-eG------------~glt~dg~~L~~SdG--------s~~i~~iDp~T~~v~~~I~V~~~g 168 (262)
T 3nol_A 110 FVWNIRNLRQVRSFNYDG-EG------------WGLTHNDQYLIMSDG--------TPVLRFLDPESLTPVRTITVTAHG 168 (262)
T ss_dssp EEEETTTCCEEEEEECSS-CC------------CCEEECSSCEEECCS--------SSEEEEECTTTCSEEEEEECEETT
T ss_pred EEEECccCcEEEEEECCC-Cc------------eEEecCCCEEEEECC--------CCeEEEEcCCCCeEEEEEEeccCC
Confidence 999999999998887532 21 223466777777432 678999999999888877652
Q ss_pred ---CCeEEEEEcCCCCEEEEEecCCCeEEEEEeCCceec
Q psy3337 261 ---ESLSALAVRDDGRFVAVGTMFTGSVFVYIAFSLQMC 296 (297)
Q Consensus 261 ---~~v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~~~~~ 296 (297)
..++.+.|. +|+..+..-. ++.|.+.|..+++.+
T Consensus 169 ~~~~~lNELe~~-~G~lyan~w~-~~~I~vIDp~tG~V~ 205 (262)
T 3nol_A 169 EELPELNELEWV-DGEIFANVWQ-TNKIVRIDPETGKVT 205 (262)
T ss_dssp EECCCEEEEEEE-TTEEEEEETT-SSEEEEECTTTCBEE
T ss_pred ccccccceeEEE-CCEEEEEEcc-CCeEEEEECCCCcEE
Confidence 125567776 6765544445 889999999998865
No 230
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.95 E-value=6.3e-08 Score=89.56 Aligned_cols=182 Identities=8% Similarity=0.013 Sum_probs=116.0
Q ss_pred CCCCCceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCEEEEEcCCCc-------------EEEEeCCCCe----eeE
Q psy3337 92 IDSKEKNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGH-------------LRLWSFPKMK----PLL 153 (297)
Q Consensus 92 ~~~~d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~-------------i~iwd~~~~~----~~~ 153 (297)
.|+...+|++ |+.+++.+.....+. ....++|+ ||+.|+.+..+.. |++|++.++. .+.
T Consensus 150 ~G~~~~~i~v~dl~tg~~~~~~~~~~--k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~ 226 (693)
T 3iuj_A 150 AGSDWREIHLMDVESKQPLETPLKDV--KFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVF 226 (693)
T ss_dssp SSCCEEEEEEEETTTCSEEEEEEEEE--ESCCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEE
T ss_pred CCCceEEEEEEECCCCCCCccccCCc--eeccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEE
Confidence 4555578999 999998765432111 12478899 9999998887743 9999987654 233
Q ss_pred Eecc-ccCCeeEEEEccCCCEEEEEeC----CCcEEEEEcCCCc-eeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEE
Q psy3337 154 HIEA-HSKEIDDVDFSISGEQIVSIAK----DGKAFVWNSKNGS-LSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLF 227 (297)
Q Consensus 154 ~~~~-~~~~v~~~~~sp~~~~l~s~~~----d~~v~lwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~ 227 (297)
.... |...+.++.|+|||++|+.... +..|++||+.++. ....+..+... ... . +++++..|+
T Consensus 227 ~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~--~~~--------~-~~~~g~~l~ 295 (693)
T 3iuj_A 227 GAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDA--DVS--------L-VDNKGSTLY 295 (693)
T ss_dssp SCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSS--CEE--------E-EEEETTEEE
T ss_pred ecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCc--eEE--------E-EeccCCEEE
Confidence 3333 4456788999999998865432 3589999997663 33444333211 111 1 355666666
Q ss_pred EeccCcccccCCCCeEEEEeCCCCce--EEEeccC-CCeEEEEEcCCCCEEEEEecCCC--eEEEEEeCCc
Q psy3337 228 TLANPLAQNKRGISYVQQWDVDSGRL--RLAREMK-ESLSALAVRDDGRFVAVGTMFTG--SVFVYIAFSL 293 (297)
Q Consensus 228 ~~~~~~~~~g~~d~~i~~wd~~~~~~--~~~~~~~-~~v~~~~~s~dg~~l~~~~~~dg--~i~vwd~~~~ 293 (297)
..++ .+...+.|..+|+.++.. ...+..+ ..+. .|++++++|+.....++ .|++||+..+
T Consensus 296 ~~t~----~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g~ 360 (693)
T 3iuj_A 296 LLTN----RDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYEGK 360 (693)
T ss_dssp EEEC----TTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTTSC
T ss_pred EEEC----CCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECCCC
Confidence 5544 122357899999988654 2333333 3354 89999998877765144 6888888654
No 231
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.91 E-value=4.1e-07 Score=78.25 Aligned_cols=187 Identities=9% Similarity=0.023 Sum_probs=123.4
Q ss_pred CceEEEEeeC-----CCeEEEEecCC-CCcEEEEEE-----------e--cCCCEEE-EEcCCCcEEEEeCCCC----ee
Q psy3337 96 EKNLRFGFKT-----FDSVQTVFAGS-ESLQRVVRL-----------S--RNGDLMV-TGGTDGHLRLWSFPKM----KP 151 (297)
Q Consensus 96 d~~i~~~~~~-----~~~~~~~~~~h-~~~v~~~~~-----------s--~~g~~l~-s~~~d~~i~iwd~~~~----~~ 151 (297)
|....||+.. ++.+..+...+ ........| + +++++|+ ++..++.|+++|+.+. +.
T Consensus 43 d~la~vDvdp~s~ty~~vi~~~~~p~~gde~HH~gwn~css~~~~~~~~~~~r~~l~v~~l~s~~I~viD~~t~p~~p~~ 122 (462)
T 2ece_A 43 DFIAVVDVNPKSETYSKIVHKVELPYINDELHHFGWNACSSALCPNGKPNIERRFLIVPGLRSSRIYIIDTKPNPREPKI 122 (462)
T ss_dssp CEEEEEECCTTSTTTTSEEEEEECSSSCCCBCCCEESCCGGGGSTTCCTTCCSCEEEEEBTTTCCEEEEECCSCTTSCEE
T ss_pred CeEEEEECCCCCCCcceEEEEEECCCCCCcccccchhhhhhhcccccCCCccCCEEEEccCCCCeEEEEECCCCCCCcee
Confidence 4334447766 77777776222 223444455 6 7777665 5667889999998644 55
Q ss_pred eEEec------c-ccCCeeEEEEccCCCEEEEEeCC------CcEEEEEcCCCceeeeeecc-CCCCceEEEEeeeeeee
Q psy3337 152 LLHIE------A-HSKEIDDVDFSISGEQIVSIAKD------GKAFVWNSKNGSLSKELKWN-TPDNIKYLFKRCRYGLV 217 (297)
Q Consensus 152 ~~~~~------~-~~~~v~~~~~sp~~~~l~s~~~d------~~v~lwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 217 (297)
...+. . ....-..+...|+| +++++..+ +.|.++|..+++.+.++... .+....+ .+
T Consensus 123 ~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Y--------d~ 193 (462)
T 2ece_A 123 IKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAY--------DF 193 (462)
T ss_dssp EEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCC--------CE
T ss_pred eeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccc--------eE
Confidence 55552 1 11245677889999 76666555 78999999999998887633 2221111 25
Q ss_pred eeCCCCeEEEEeccC-----------cccccCCCCeEEEEeCCCCceEEEeccCC---CeEEEEE--cCCCCEEEEEec-
Q psy3337 218 EDSPKRSRLFTLANP-----------LAQNKRGISYVQQWDVDSGRLRLAREMKE---SLSALAV--RDDGRFVAVGTM- 280 (297)
Q Consensus 218 ~~s~~~~~l~~~~~~-----------~~~~g~~d~~i~~wd~~~~~~~~~~~~~~---~v~~~~~--s~dg~~l~~~~~- 280 (297)
.|+|+++.+++.... ..+.+....+|.+||+.+++.+..+.... ....+.| +|+|+++.++++
T Consensus 194 ~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~ 273 (462)
T 2ece_A 194 WWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVV 273 (462)
T ss_dssp EEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEE
T ss_pred EECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEee
Confidence 579999988887420 00001346899999999998888887642 2566656 999999888774
Q ss_pred ----CCCeEEEEEeC
Q psy3337 281 ----FTGSVFVYIAF 291 (297)
Q Consensus 281 ----~dg~i~vwd~~ 291 (297)
.+++|.+|...
T Consensus 274 ~~~~Lss~V~v~~~d 288 (462)
T 2ece_A 274 SLKDLSSSIWLWFYE 288 (462)
T ss_dssp ETTTCCEEEEEEEEE
T ss_pred eccCCCceEEEEEec
Confidence 48889776543
No 232
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.90 E-value=2.9e-07 Score=73.62 Aligned_cols=172 Identities=12% Similarity=-0.008 Sum_probs=116.5
Q ss_pred CcCCCCCCCceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCC-CEEEEEcCCCcEEEEeCCCCeeeEEeccccCCeeEE
Q psy3337 88 ILNSIDSKEKNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNG-DLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDV 165 (297)
Q Consensus 88 ~l~~~~~~d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g-~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~ 165 (297)
.|-.+.+.++.|+. |+.+++.+..+. .....-..+++ ++ +..+....++.+.+||..+.+.+.++... ..-..+
T Consensus 66 ~Ly~stG~~g~v~~iD~~Tgkv~~~~l-~~~~FgeGit~--~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~-~eGwGL 141 (268)
T 3nok_A 66 HFFESTGHQGTLRQLSLESAQPVWMER-LGNIFAEGLAS--DGERLYQLTWTEGLLFTWSGMPPQRERTTRYS-GEGWGL 141 (268)
T ss_dssp EEEEEETTTTEEEECCSSCSSCSEEEE-CTTCCEEEEEE--CSSCEEEEESSSCEEEEEETTTTEEEEEEECS-SCCCCE
T ss_pred EEEEEcCCCCEEEEEECCCCcEEeEEC-CCCcceeEEEE--eCCEEEEEEccCCEEEEEECCcCcEEEEEeCC-CceeEE
Confidence 44557777778988 999999888773 44333233444 44 44445557889999999999999888743 222344
Q ss_pred EEccCCCEEEEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEE
Q psy3337 166 DFSISGEQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQ 245 (297)
Q Consensus 166 ~~sp~~~~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~ 245 (297)
+ +++..|+.+..++.|.++|..+.+.+..+....... . ....+.+.|. +|...+.... +..|.+
T Consensus 142 t--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~-~----v~~lNeLe~~-dG~lyanvw~--------s~~I~v 205 (268)
T 3nok_A 142 C--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQ-P----VELINELECA-NGVIYANIWH--------SSDVLE 205 (268)
T ss_dssp E--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTE-E----CCCEEEEEEE-TTEEEEEETT--------CSEEEE
T ss_pred e--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCc-c----cccccccEEe-CCEEEEEECC--------CCeEEE
Confidence 4 567888877778999999999998887775432110 0 0112235555 6764544333 779999
Q ss_pred EeCCCCceEEEeccC--------------CCeEEEEEcCCCCEEEEEe
Q psy3337 246 WDVDSGRLRLAREMK--------------ESLSALAVRDDGRFVAVGT 279 (297)
Q Consensus 246 wd~~~~~~~~~~~~~--------------~~v~~~~~s~dg~~l~~~~ 279 (297)
.|..+++.+..+... ...+.++|+|+++.|++.+
T Consensus 206 IDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 206 IDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp ECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred EeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 999999998876532 1278999999876665555
No 233
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.90 E-value=8.3e-08 Score=81.00 Aligned_cols=163 Identities=9% Similarity=0.088 Sum_probs=105.6
Q ss_pred CcEEEEEEecCCCEEEEEc--CCCcEEEEeCCCCeeeEEec-------cccCCeeEEEEccCCCEEEEEeC-----CCcE
Q psy3337 118 SLQRVVRLSRNGDLMVTGG--TDGHLRLWSFPKMKPLLHIE-------AHSKEIDDVDFSISGEQIVSIAK-----DGKA 183 (297)
Q Consensus 118 ~~v~~~~~s~~g~~l~s~~--~d~~i~iwd~~~~~~~~~~~-------~~~~~v~~~~~sp~~~~l~s~~~-----d~~v 183 (297)
.....++++|+|+.+++.. .++.++||.+.+++. ..+. .|-..+.+++++++++++++-.. +..|
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~-~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i 95 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGL-IPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKL 95 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEE-EESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCe-ecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeE
Confidence 5678999999999988863 234245555445543 3222 24467999999999886665433 5789
Q ss_pred EEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCCCceEEEeccC---
Q psy3337 184 FVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSGRLRLAREMK--- 260 (297)
Q Consensus 184 ~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~--- 260 (297)
.+||+.+++.+..+..+..... .......+++++++..++.... ++..++.|.+||+.+++..+.+..|
T Consensus 96 ~~~d~~tg~~~~~~~~~~~~~~----~~~~~~~v~vd~~~g~~yvtd~----~~~~~~~i~v~d~~~g~~~r~~~~~~~~ 167 (343)
T 2qe8_A 96 VAWDTLNNQLSRVIYLPPPITL----SNSFVNDLAVDLIHNFVYISDP----APDDKAALIRVDLQTGLAARVLQGYPGI 167 (343)
T ss_dssp EEEETTTTEEEEEEECCTTTSC----TTCCCCEEEEETTTTEEEEEEC----CSGGGCEEEEEETTTCCEEEECTTCTTT
T ss_pred EEEECCCCeEEEEEECChhhcc----cccccceEEEecCCCEEEEEcC----ccCCCCeEEEEECCCCCEEEEecCCCcc
Confidence 9999999987777654321110 0012345778876544444321 0113689999999888776655331
Q ss_pred ---------------------------CCeEEEEEcCCCCEEEEEecCCC-eEEEEEe
Q psy3337 261 ---------------------------ESLSALAVRDDGRFVAVGTMFTG-SVFVYIA 290 (297)
Q Consensus 261 ---------------------------~~v~~~~~s~dg~~l~~~~~~dg-~i~vwd~ 290 (297)
..+..++|+|||+.|+++.. ++ .++.++.
T Consensus 168 ~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~-~~~~l~~~~~ 224 (343)
T 2qe8_A 168 APEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPM-HSTSMYRIKS 224 (343)
T ss_dssp SCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEES-SCSEEEEEEH
T ss_pred cccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeC-CCCeEEEEEH
Confidence 12588999999999988877 55 5555553
No 234
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.89 E-value=1.3e-07 Score=79.76 Aligned_cols=172 Identities=9% Similarity=0.032 Sum_probs=111.1
Q ss_pred CCCCcEEEEEEecCCCEEEEEcC-----CCcEEEEeCCCCeeeEEeccc------cCCeeEEEEccCCCEE-EEEe---C
Q psy3337 115 GSESLQRVVRLSRNGDLMVTGGT-----DGHLRLWSFPKMKPLLHIEAH------SKEIDDVDFSISGEQI-VSIA---K 179 (297)
Q Consensus 115 ~h~~~v~~~~~s~~g~~l~s~~~-----d~~i~iwd~~~~~~~~~~~~~------~~~v~~~~~sp~~~~l-~s~~---~ 179 (297)
+|...+..++++++++++++-.. +..|.+||+.+++.+..+... ...+..++++|++..+ ++-. .
T Consensus 64 ~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~ 143 (343)
T 2qe8_A 64 ITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDD 143 (343)
T ss_dssp CCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGG
T ss_pred cceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCC
Confidence 45567889999999876665433 578999999998876655432 2356899999865454 4444 5
Q ss_pred CCcEEEEEcCCCceeeeeeccC---CCCceEEE----------------EeeeeeeeeeCCCCeEEEEeccCcccccCCC
Q psy3337 180 DGKAFVWNSKNGSLSKELKWNT---PDNIKYLF----------------KRCRYGLVEDSPKRSRLFTLANPLAQNKRGI 240 (297)
Q Consensus 180 d~~v~lwd~~~~~~~~~~~~~~---~~~~~~~~----------------~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d 240 (297)
++.|.+||+.+++....+..|. +....+.+ .......++++|+++.|+.... ..
T Consensus 144 ~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~-------~~ 216 (343)
T 2qe8_A 144 KAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPM-------HS 216 (343)
T ss_dssp GCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEES-------SC
T ss_pred CCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeC-------CC
Confidence 7899999998887766554321 10000100 0112356899999998888654 13
Q ss_pred CeEEEEeCC---CCc-----e---EEEeccCCCeEEEEEcCCCCEEEEEecCCCeEEEEEeCCce
Q psy3337 241 SYVQQWDVD---SGR-----L---RLAREMKESLSALAVRDDGRFVAVGTMFTGSVFVYIAFSLQ 294 (297)
Q Consensus 241 ~~i~~wd~~---~~~-----~---~~~~~~~~~v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~~~ 294 (297)
..|+.++.. .+. . +..+........++++++|.++++... ++.|.+||..+++
T Consensus 217 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~-~~~V~~~d~~~G~ 280 (343)
T 2qe8_A 217 TSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLA-HSAIGVITSADRA 280 (343)
T ss_dssp SEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGG-GTEEEEEETTTTE
T ss_pred CeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccC-CCeEEEEECCCCC
Confidence 366666532 111 0 111111123667999999998888888 9999999985554
No 235
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.88 E-value=4.7e-07 Score=72.34 Aligned_cols=172 Identities=8% Similarity=0.053 Sum_probs=114.5
Q ss_pred CCCCCCCc--eEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCEEEEE-cCCCcEEEEeCCCCeeeEEeccccCCeeEE
Q psy3337 90 NSIDSKEK--NLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTG-GTDGHLRLWSFPKMKPLLHIEAHSKEIDDV 165 (297)
Q Consensus 90 ~~~~~~d~--~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~-~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~ 165 (297)
-.+.+.++ .|+. |+.+++.+..+..+. ......+.++++.|... ..++.+.+||..+.+.+.++.... ...
T Consensus 56 yestG~~g~S~v~~vD~~Tgkv~~~~~l~~--~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~---eG~ 130 (262)
T 3nol_A 56 YESTGLNGRSSIRKVDIESGKTLQQIELGK--RYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVRSFNYDG---EGW 130 (262)
T ss_dssp EEEEEETTEEEEEEECTTTCCEEEEEECCT--TCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEEEEECSS---CCC
T ss_pred EEECCCCCCceEEEEECCCCcEEEEEecCC--ccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEEEEECCC---Cce
Confidence 44444443 7887 999999998886322 23343344445555544 458899999999999998887432 223
Q ss_pred EEccCCCEEEEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEE
Q psy3337 166 DFSISGEQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQ 245 (297)
Q Consensus 166 ~~sp~~~~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~ 245 (297)
.+.+++..|+.+..++.|.++|..+.+.+..+...... .. ....+.+.+. +|...+.... +..|.+
T Consensus 131 glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g--~~---~~~lNELe~~-~G~lyan~w~--------~~~I~v 196 (262)
T 3nol_A 131 GLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHG--EE---LPELNELEWV-DGEIFANVWQ--------TNKIVR 196 (262)
T ss_dssp CEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETT--EE---CCCEEEEEEE-TTEEEEEETT--------SSEEEE
T ss_pred EEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCC--cc---ccccceeEEE-CCEEEEEEcc--------CCeEEE
Confidence 34457777777666788999999999888776542100 00 0112234554 6765544333 779999
Q ss_pred EeCCCCceEEEeccC-------------CCeEEEEEcCCCCEEEEEec
Q psy3337 246 WDVDSGRLRLAREMK-------------ESLSALAVRDDGRFVAVGTM 280 (297)
Q Consensus 246 wd~~~~~~~~~~~~~-------------~~v~~~~~s~dg~~l~~~~~ 280 (297)
.|..+++.+..+... ...+.++|+|+++.|++.+.
T Consensus 197 IDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 197 IDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp ECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred EECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 999999998887542 12689999999888777763
No 236
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.87 E-value=1e-07 Score=82.42 Aligned_cols=112 Identities=7% Similarity=-0.022 Sum_probs=82.2
Q ss_pred CcEEEEeCCCCeeeEEeccccCCeeEEEEccCCCEEEEEe----------CCCcEEEEEcCCCceeeeeeccCCCCceEE
Q psy3337 139 GHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIA----------KDGKAFVWNSKNGSLSKELKWNTPDNIKYL 208 (297)
Q Consensus 139 ~~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~----------~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~ 208 (297)
+.|.++|..+++.+..+..-..+ .+.++||+++|+++. .++.|.++|..+++.+..+....+. .+.
T Consensus 99 ~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~--r~~ 174 (426)
T 3c75_H 99 TQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAP--RFL 174 (426)
T ss_dssp EEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCC--CCC
T ss_pred CeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCcc--ccc
Confidence 68999999999999888754444 899999999888775 3678999999999988877542000 000
Q ss_pred EEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCCCceEEEeccCC
Q psy3337 209 FKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSGRLRLAREMKE 261 (297)
Q Consensus 209 ~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~ 261 (297)
....-..+.++|||++++.... ..++.|.++|+.+++.+..+....
T Consensus 175 -~g~~P~~~~~spDGk~lyV~n~------~~~~~VsVID~~t~kvv~~I~v~g 220 (426)
T 3c75_H 175 -VGTYQWMNALTPDNKNLLFYQF------SPAPAVGVVDLEGKTFDRMLDVPD 220 (426)
T ss_dssp -BSCCGGGSEECTTSSEEEEEEC------SSSCEEEEEETTTTEEEEEEECCS
T ss_pred -cCCCcceEEEcCCCCEEEEEec------CCCCeEEEEECCCCeEEEEEEcCC
Confidence 0000113678999999998653 125789999999999988887543
No 237
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.83 E-value=5.5e-08 Score=86.43 Aligned_cols=186 Identities=5% Similarity=-0.017 Sum_probs=122.6
Q ss_pred CCCCCCCceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCEEEEEcCCC-----------------------------
Q psy3337 90 NSIDSKEKNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDG----------------------------- 139 (297)
Q Consensus 90 ~~~~~~d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~----------------------------- 139 (297)
......++.+.+ |..+.+.+.++..+-. -..++++|+|+++++.+.+.
T Consensus 168 ~~~~~~~~~vtvID~~t~~v~~qI~Vgg~--pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v 245 (595)
T 1fwx_A 168 EDVANYVNVFTAVDADKWEVAWQVLVSGN--LDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAI 245 (595)
T ss_dssp TCGGGEEEEEEEEETTTTEEEEEEEESSC--CCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHH
T ss_pred ccccccCceEEEEECCCCeEEEEEEeCCC--ccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEec
Confidence 344566778888 9999888888773332 24688999999988877543
Q ss_pred ---------cEEEEeCCC--Cee-eEEeccccCCeeEEEEccCCCEEEEEe-CCCcEEEEEcCCCceee--------eee
Q psy3337 140 ---------HLRLWSFPK--MKP-LLHIEAHSKEIDDVDFSISGEQIVSIA-KDGKAFVWNSKNGSLSK--------ELK 198 (297)
Q Consensus 140 ---------~i~iwd~~~--~~~-~~~~~~~~~~v~~~~~sp~~~~l~s~~-~d~~v~lwd~~~~~~~~--------~~~ 198 (297)
.|.+.|..+ ++. +..+.. .....++.++|||+++++++ .+.+|.++|+.+.+... ...
T Consensus 246 ~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~ 324 (595)
T 1fwx_A 246 AAGDYQELNGVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVV 324 (595)
T ss_dssp HHTCSEEETTEEEEECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEE
T ss_pred cCCCeeEECcEEEEeCcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceE
Confidence 466777666 444 344432 23567899999999887766 57899999998542100 000
Q ss_pred ccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCC----------CceEEEeccCCCeE----
Q psy3337 199 WNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDS----------GRLRLAREMKESLS---- 264 (297)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~----------~~~~~~~~~~~~v~---- 264 (297)
...+.+ ..-..++|+|+| ++++... .++.|.+||+.. .+.+..+..+-.+-
T Consensus 325 ~~v~vG-------~gP~h~aF~~dG-~aY~t~~-------ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~ 389 (595)
T 1fwx_A 325 AEPELG-------LGPLHTAFDGRG-NAYTSLF-------LDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKT 389 (595)
T ss_dssp ECCBCC-------SCEEEEEECTTS-EEEEEET-------TTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEE
T ss_pred EEcCCC-------CCcceEEECCCC-eEEEEEe-------cCCcEEEEEhhHhhhhhcccccceeEEEeeccccccccee
Confidence 010111 011237899999 6666543 489999999987 56777877765532
Q ss_pred --EEEEcCCCCEEEEEecCC-CeE-----------EEEEeCCc
Q psy3337 265 --ALAVRDDGRFVAVGTMFT-GSV-----------FVYIAFSL 293 (297)
Q Consensus 265 --~~~~s~dg~~l~~~~~~d-g~i-----------~vwd~~~~ 293 (297)
.+.++|||++|++...+. .++ .++|+..+
T Consensus 390 ~~g~t~~~DGk~l~~~Nk~skdr~~~~gp~~~~~~ql~dis~~ 432 (595)
T 1fwx_A 390 VMGETLDATNDWLVCLSKFSKDRFLNVGPLKPENDQLIDISGD 432 (595)
T ss_dssp TTTTSTTCCSSEEEEEESCCTTSSCCCCSSCCEEEEEEECSSS
T ss_pred ccceEeCCCCCEEEEcCCCCccccccCCCCCCCcceEEEcCCC
Confidence 224579999999987643 233 78888543
No 238
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.81 E-value=1.7e-06 Score=68.47 Aligned_cols=164 Identities=12% Similarity=0.130 Sum_probs=110.3
Q ss_pred eEEEEecCCCCcEEEEEEecCCCEEEEEcCC--CcEEEEeCCCCeeeEEeccccCCeeEEEEccCCCEEE-EEeCCCcEE
Q psy3337 108 SVQTVFAGSESLQRVVRLSRNGDLMVTGGTD--GHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIV-SIAKDGKAF 184 (297)
Q Consensus 108 ~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d--~~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~-s~~~d~~v~ 184 (297)
.+.++..........+.|++ +.++.+.+.+ ..|+.+|+.+++.+..+.-.. ........+.+..|+ ..-.++.+.
T Consensus 11 v~~~~phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~-~~fgeGi~~~~~~ly~ltw~~~~v~ 88 (243)
T 3mbr_X 11 VVKRYPHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPP-PYFGAGIVAWRDRLIQLTWRNHEGF 88 (243)
T ss_dssp EEEEEECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCT-TCCEEEEEEETTEEEEEESSSSEEE
T ss_pred EEEEcCCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCC-CcceeEEEEeCCEEEEEEeeCCEEE
Confidence 45555434456677999986 5566666665 489999999999887775332 222222223344444 444688999
Q ss_pred EEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCCCceEEEeccC----
Q psy3337 185 VWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSGRLRLAREMK---- 260 (297)
Q Consensus 185 lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~---- 260 (297)
+||..+.+.+.++.... .+ ..+.+++..|+.... ++.|.++|..+.+.+..+...
T Consensus 89 v~D~~tl~~~~ti~~~~-~G------------wglt~dg~~L~vSdg--------s~~l~~iDp~t~~~~~~I~V~~~g~ 147 (243)
T 3mbr_X 89 VYDLATLTPRARFRYPG-EG------------WALTSDDSHLYMSDG--------TAVIRKLDPDTLQQVGSIKVTAGGR 147 (243)
T ss_dssp EEETTTTEEEEEEECSS-CC------------CEEEECSSCEEEECS--------SSEEEEECTTTCCEEEEEECEETTE
T ss_pred EEECCcCcEEEEEeCCC-Cc------------eEEeeCCCEEEEECC--------CCeEEEEeCCCCeEEEEEEEccCCc
Confidence 99999999998886532 11 223456666666433 778999999999888877653
Q ss_pred --CCeEEEEEcCCCCEEEEEecCCCeEEEEEeCCceec
Q psy3337 261 --ESLSALAVRDDGRFVAVGTMFTGSVFVYIAFSLQMC 296 (297)
Q Consensus 261 --~~v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~~~~~ 296 (297)
..++.+.|. +|+..+..-. +..|.+.|..+++.+
T Consensus 148 ~~~~lNeLe~~-~G~lyanvw~-s~~I~vIDp~tG~V~ 183 (243)
T 3mbr_X 148 PLDNLNELEWV-NGELLANVWL-TSRIARIDPASGKVV 183 (243)
T ss_dssp ECCCEEEEEEE-TTEEEEEETT-TTEEEEECTTTCBEE
T ss_pred ccccceeeEEe-CCEEEEEECC-CCeEEEEECCCCCEE
Confidence 225666665 6665544445 789999999998865
No 239
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.78 E-value=4.6e-06 Score=66.01 Aligned_cols=165 Identities=10% Similarity=-0.028 Sum_probs=109.5
Q ss_pred ceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCEE-EEEcCCCcEEEEeCCCCeeeEEeccccCCeeEEEEccCCCEE
Q psy3337 97 KNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDLM-VTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQI 174 (297)
Q Consensus 97 ~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l-~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l 174 (297)
..|+. |+.+++.+..+..... .......+.++.| .....++.+.+||..+.+.+.++.... .-..++ +++..|
T Consensus 43 S~v~~vD~~tgkv~~~~~l~~~--~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~-~Gwglt--~dg~~L 117 (243)
T 3mbr_X 43 SSVRKVDLETGRILQRAEVPPP--YFGAGIVAWRDRLIQLTWRNHEGFVYDLATLTPRARFRYPG-EGWALT--SDDSHL 117 (243)
T ss_dssp CEEEEEETTTCCEEEEEECCTT--CCEEEEEEETTEEEEEESSSSEEEEEETTTTEEEEEEECSS-CCCEEE--ECSSCE
T ss_pred ceEEEEECCCCCEEEEEeCCCC--cceeEEEEeCCEEEEEEeeCCEEEEEECCcCcEEEEEeCCC-CceEEe--eCCCEE
Confidence 47887 9999999988862222 2233333334444 445568899999999999998887433 223444 567777
Q ss_pred EEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCCCceE
Q psy3337 175 VSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSGRLR 254 (297)
Q Consensus 175 ~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~~ 254 (297)
+.+..++.|.++|..+.+.+..+...... .. ....+.+.+. +|...+.+.. +..|.+.|..+|+.+
T Consensus 118 ~vSdgs~~l~~iDp~t~~~~~~I~V~~~g---~~--~~~lNeLe~~-~G~lyanvw~--------s~~I~vIDp~tG~V~ 183 (243)
T 3mbr_X 118 YMSDGTAVIRKLDPDTLQQVGSIKVTAGG---RP--LDNLNELEWV-NGELLANVWL--------TSRIARIDPASGKVV 183 (243)
T ss_dssp EEECSSSEEEEECTTTCCEEEEEECEETT---EE--CCCEEEEEEE-TTEEEEEETT--------TTEEEEECTTTCBEE
T ss_pred EEECCCCeEEEEeCCCCeEEEEEEEccCC---cc--cccceeeEEe-CCEEEEEECC--------CCeEEEEECCCCCEE
Confidence 77777899999999999888777543210 00 0111234444 5665544333 679999999999998
Q ss_pred EEeccC-------------C-CeEEEEEcCCCCEEEEEec
Q psy3337 255 LAREMK-------------E-SLSALAVRDDGRFVAVGTM 280 (297)
Q Consensus 255 ~~~~~~-------------~-~v~~~~~s~dg~~l~~~~~ 280 (297)
..+... . ..+.++++|+++.|++.+.
T Consensus 184 ~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 184 AWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp EEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred EEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 876522 1 2789999998777766663
No 240
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.75 E-value=6e-07 Score=82.59 Aligned_cols=200 Identities=14% Similarity=0.162 Sum_probs=131.8
Q ss_pred CceEEE-EeeCCCeEEEEec--CCCC----------------------------cEEEEEEecCCCEEEEEcCCC-----
Q psy3337 96 EKNLRF-GFKTFDSVQTVFA--GSES----------------------------LQRVVRLSRNGDLMVTGGTDG----- 139 (297)
Q Consensus 96 d~~i~~-~~~~~~~~~~~~~--~h~~----------------------------~v~~~~~s~~g~~l~s~~~d~----- 139 (297)
++.|+. |..+|+.+-.+.. +... ....++++|+...++.+..++
T Consensus 177 ~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~ 256 (668)
T 1kv9_A 177 RGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNR 256 (668)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCH
T ss_pred CCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCcccc
Confidence 577887 9999998877751 1100 012468888888888887766
Q ss_pred --------------cEEEEeCCCCeeeEEecc--cc-------CCeeEEEEccCCC---EEEEEeCCCcEEEEEcCCCce
Q psy3337 140 --------------HLRLWSFPKMKPLLHIEA--HS-------KEIDDVDFSISGE---QIVSIAKDGKAFVWNSKNGSL 193 (297)
Q Consensus 140 --------------~i~iwd~~~~~~~~~~~~--~~-------~~v~~~~~sp~~~---~l~s~~~d~~v~lwd~~~~~~ 193 (297)
.|..+|..+++.+..++. |. .+.....+..+++ .++.++.+|.++++|..+|+.
T Consensus 257 ~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~ 336 (668)
T 1kv9_A 257 EVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKL 336 (668)
T ss_dssp HHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCE
T ss_pred CCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCE
Confidence 399999999999887764 22 2222223334665 688889999999999999998
Q ss_pred eeeeeccCC---------------------CCceEEEEee-----eeeeeeeCCCCeEEEEeccCc--------------
Q psy3337 194 SKELKWNTP---------------------DNIKYLFKRC-----RYGLVEDSPKRSRLFTLANPL-------------- 233 (297)
Q Consensus 194 ~~~~~~~~~---------------------~~~~~~~~~~-----~~~~~~~s~~~~~l~~~~~~~-------------- 233 (297)
+........ .......... .+..++++|+...++......
T Consensus 337 l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~ 416 (668)
T 1kv9_A 337 ISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTR 416 (668)
T ss_dssp EEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCC
T ss_pred eccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccc
Confidence 754432210 0000011111 112367788877766532210
Q ss_pred -------------cc-ccCCCCeEEEEeCCCCceEEEeccCCCeEEEEEcCCCCEEEEEecCCCeEEEEEeCCceec
Q psy3337 234 -------------AQ-NKRGISYVQQWDVDSGRLRLAREMKESLSALAVRDDGRFVAVGTMFTGSVFVYIAFSLQMC 296 (297)
Q Consensus 234 -------------~~-~g~~d~~i~~wd~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~~~~~ 296 (297)
.. ....++.|..||+.+++.+-.......+....+...+.+|++++. ||.|++||..+++.+
T Consensus 417 ~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t~gg~vf~g~~-dg~l~a~d~~tG~~l 492 (668)
T 1kv9_A 417 KAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQGTA-AGQMHAYSADKGEAL 492 (668)
T ss_dssp SSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECT-TSEEEEEETTTCCEE
T ss_pred cccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCCCCcCceeEeCCCEEEEECC-cccchhhhhhcChhh
Confidence 00 223458999999999999877766555444455567888999998 999999999999865
No 241
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.70 E-value=2.1e-05 Score=63.52 Aligned_cols=183 Identities=9% Similarity=-0.060 Sum_probs=109.3
Q ss_pred CCCceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCC-EEEEEcCCCcEEEEeCCCCeeeEEeccccCCeeEEEEccCC
Q psy3337 94 SKEKNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGD-LMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISG 171 (297)
Q Consensus 94 ~~d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~-~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~ 171 (297)
...+.|.. ++........+. ........++++|++. .+++-...+.|.++++........+.........++++|++
T Consensus 55 ~~~~~I~~~~~~g~~~~~~~~-~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~ 133 (267)
T 1npe_A 55 ISEPSIGRASLHGGEPTTIIR-QDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVR 133 (267)
T ss_dssp TTTTEEEEEESSSCCCEEEEC-TTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTT
T ss_pred CCCCEEEEEecCCCCcEEEEE-CCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCC
Confidence 34456665 665544332222 2224568999999754 44555667889999986433222222222457899999976
Q ss_pred CEEEEEeC---CCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeC
Q psy3337 172 EQIVSIAK---DGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDV 248 (297)
Q Consensus 172 ~~l~s~~~---d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~ 248 (297)
..|+.+.. .+.|..+++. +.....+... .. . .-..++++|++..|+.+.. ..+.|.++|+
T Consensus 134 g~lyv~~~~~~~~~I~~~~~d-g~~~~~~~~~-~~--~------~P~gia~d~~~~~lyv~d~-------~~~~I~~~~~ 196 (267)
T 1npe_A 134 GNLYWTDWNRDNPKIETSHMD-GTNRRILAQD-NL--G------LPNGLTFDAFSSQLCWVDA-------GTHRAECLNP 196 (267)
T ss_dssp TEEEEEECCSSSCEEEEEETT-SCCCEEEECT-TC--S------CEEEEEEETTTTEEEEEET-------TTTEEEEEET
T ss_pred CEEEEEECCCCCcEEEEEecC-CCCcEEEEEC-CC--C------CCcEEEEcCCCCEEEEEEC-------CCCEEEEEec
Confidence 66655543 3678888875 3322222111 00 0 1124778998877776543 3579999999
Q ss_pred CCCceEEEeccCCCeEEEEEcCCCCEEEEEecCCCeEEEEEeCCceec
Q psy3337 249 DSGRLRLAREMKESLSALAVRDDGRFVAVGTMFTGSVFVYIAFSLQMC 296 (297)
Q Consensus 249 ~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~~~~~ 296 (297)
........+........+++. +..|+++....+.|.++|..+++.+
T Consensus 197 ~g~~~~~~~~~~~~P~gi~~d--~~~lyva~~~~~~v~~~d~~~g~~~ 242 (267)
T 1npe_A 197 AQPGRRKVLEGLQYPFAVTSY--GKNLYYTDWKTNSVIAMDLAISKEM 242 (267)
T ss_dssp TEEEEEEEEECCCSEEEEEEE--TTEEEEEETTTTEEEEEETTTTEEE
T ss_pred CCCceEEEecCCCCceEEEEe--CCEEEEEECCCCeEEEEeCCCCCce
Confidence 865444444433336677654 5566655542789999999887754
No 242
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.65 E-value=7.3e-06 Score=69.73 Aligned_cols=185 Identities=9% Similarity=0.060 Sum_probs=111.4
Q ss_pred CCCCceEEE-EeeCCCeEEEEecCC--------CCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCeeeEEeccccCCee
Q psy3337 93 DSKEKNLRF-GFKTFDSVQTVFAGS--------ESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEID 163 (297)
Q Consensus 93 ~~~d~~i~~-~~~~~~~~~~~~~~h--------~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~ 163 (297)
++.++.|.. |..+|+.+-...... ...+.+. ...++..++.++.++.|..+|..+++.+..+........
T Consensus 59 ~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~ 137 (376)
T 3q7m_A 59 ADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGG-VTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALS 137 (376)
T ss_dssp ECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEE-EEEETTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCS
T ss_pred EcCCCeEEEEEccCCceeeeecCccccccccccCcccccC-ceEeCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEc
Confidence 445666766 888998876665221 2222222 222456788888999999999999998877654433222
Q ss_pred EEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeE
Q psy3337 164 DVDFSISGEQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYV 243 (297)
Q Consensus 164 ~~~~sp~~~~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i 243 (297)
..... +..++.++.++.|..+|..+|+.+..+....+.. ... ........ ++ .++. +..++.|
T Consensus 138 ~p~~~--~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~---~~~--~~~~~~~~-~~-~v~~--------g~~~g~l 200 (376)
T 3q7m_A 138 RPVVS--DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSL---SLR--GESAPTTA-FG-AAVV--------GGDNGRV 200 (376)
T ss_dssp CCEEE--TTEEEEECTTSEEEEEETTTCCEEEEEECCC--------C--CCCCCEEE-TT-EEEE--------CCTTTEE
T ss_pred CCEEE--CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCce---eec--CCCCcEEE-CC-EEEE--------EcCCCEE
Confidence 22222 3477788899999999999998887765433210 000 00001111 22 3444 4458899
Q ss_pred EEEeCCCCceEEEeccCCC--------eEEEEEcC--CCCEEEEEecCCCeEEEEEeCCceec
Q psy3337 244 QQWDVDSGRLRLAREMKES--------LSALAVRD--DGRFVAVGTMFTGSVFVYIAFSLQMC 296 (297)
Q Consensus 244 ~~wd~~~~~~~~~~~~~~~--------v~~~~~s~--dg~~l~~~~~~dg~i~vwd~~~~~~~ 296 (297)
..+|..+|+.+........ +..+...| .+..+++++. ++.+..+|..+++.+
T Consensus 201 ~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~-~g~l~~~d~~tG~~~ 262 (376)
T 3q7m_A 201 SAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAY-NGNLTALDLRSGQIM 262 (376)
T ss_dssp EEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECT-TSCEEEEETTTCCEE
T ss_pred EEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEec-CcEEEEEECCCCcEE
Confidence 9999999988766543211 00011111 3456667777 888888888887653
No 243
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.63 E-value=2.5e-05 Score=63.11 Aligned_cols=161 Identities=10% Similarity=-0.039 Sum_probs=100.9
Q ss_pred CcEEEEEEecCCCEE-EEEcCCCcEEEEeCCCCeeeEEeccccCCeeEEEEccCCCEEEEE-eCCCcEEEEEcCCCceee
Q psy3337 118 SLQRVVRLSRNGDLM-VTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSI-AKDGKAFVWNSKNGSLSK 195 (297)
Q Consensus 118 ~~v~~~~~s~~g~~l-~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~-~~d~~v~lwd~~~~~~~~ 195 (297)
..+..++|+++++.| ++-..++.|..+++........+.........++++|++..|+.+ ...+.|.++++.... ..
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~-~~ 114 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQ-RR 114 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CE
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCC-EE
Confidence 356799999976544 555567899999987654433333233467899999976555544 456789999985432 22
Q ss_pred eeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCCCceEEEecc-CCCeEEEEEcCCCCE
Q psy3337 196 ELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSGRLRLAREM-KESLSALAVRDDGRF 274 (297)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~-~~~v~~~~~s~dg~~ 274 (297)
.+.... . ..-..++++|++..|+.+.. +...+.|..+++........... ......++++|++..
T Consensus 115 ~~~~~~-~--------~~P~~i~vd~~~g~lyv~~~-----~~~~~~I~~~~~dg~~~~~~~~~~~~~P~gia~d~~~~~ 180 (267)
T 1npe_A 115 VLFDTG-L--------VNPRGIVTDPVRGNLYWTDW-----NRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQ 180 (267)
T ss_dssp EEECSS-C--------SSEEEEEEETTTTEEEEEEC-----CSSSCEEEEEETTSCCCEEEECTTCSCEEEEEEETTTTE
T ss_pred EEEECC-C--------CCccEEEEeeCCCEEEEEEC-----CCCCcEEEEEecCCCCcEEEEECCCCCCcEEEEcCCCCE
Confidence 221110 0 11124778997666666543 22246888888864322222222 233889999998887
Q ss_pred EEEEecCCCeEEEEEeCCc
Q psy3337 275 VAVGTMFTGSVFVYIAFSL 293 (297)
Q Consensus 275 l~~~~~~dg~i~vwd~~~~ 293 (297)
|..+....+.|.++|+...
T Consensus 181 lyv~d~~~~~I~~~~~~g~ 199 (267)
T 1npe_A 181 LCWVDAGTHRAECLNPAQP 199 (267)
T ss_dssp EEEEETTTTEEEEEETTEE
T ss_pred EEEEECCCCEEEEEecCCC
Confidence 7666653789999998654
No 244
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.62 E-value=3.4e-06 Score=77.68 Aligned_cols=161 Identities=11% Similarity=0.058 Sum_probs=108.2
Q ss_pred eEEE-EeeCCCeEEEEecC-CC-------CcEEEEEEecCC---CEEEEEcCCCcEEEEeCCCCeeeEEecccc------
Q psy3337 98 NLRF-GFKTFDSVQTVFAG-SE-------SLQRVVRLSRNG---DLMVTGGTDGHLRLWSFPKMKPLLHIEAHS------ 159 (297)
Q Consensus 98 ~i~~-~~~~~~~~~~~~~~-h~-------~~v~~~~~s~~g---~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~------ 159 (297)
+|.. |..+|+.+-.+... |. .....+....+| ..++.++.+|.++++|..+++.+..+....
T Consensus 284 sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~ 363 (677)
T 1kb0_A 284 SIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASG 363 (677)
T ss_dssp EEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEE
T ss_pred EEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccc
Confidence 3555 88999988777622 31 122233444577 689999999999999999999876654211
Q ss_pred -----CCe------------------------eEEEEccCCCEEEEEeC-------------------------------
Q psy3337 160 -----KEI------------------------DDVDFSISGEQIVSIAK------------------------------- 179 (297)
Q Consensus 160 -----~~v------------------------~~~~~sp~~~~l~s~~~------------------------------- 179 (297)
..+ ..++|+|+..++++...
T Consensus 364 ~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g 443 (677)
T 1kb0_A 364 YDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTA 443 (677)
T ss_dssp ECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCC
T ss_pred cCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccc
Confidence 001 15788998888877543
Q ss_pred ------------CCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEe
Q psy3337 180 ------------DGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWD 247 (297)
Q Consensus 180 ------------d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd 247 (297)
.+.|..||+.+++.+..+....+.. ...+..++..++. ++.++.+++||
T Consensus 444 ~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~-----------~g~~~~~g~~v~~--------g~~dg~l~a~D 504 (677)
T 1kb0_A 444 KFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSPWN-----------GGTLTTAGNVVFQ--------GTADGRLVAYH 504 (677)
T ss_dssp EEECSSCCCSCCEEEEEEEETTTTEEEEEEEESSSCC-----------CCEEEETTTEEEE--------ECTTSEEEEEE
T ss_pred cccccccCCCCCccEEEEEeCCCCcEEeecCCCCCCc-----------CcceEeCCCEEEE--------ECCCCcEEEEE
Confidence 2679999999998877765433211 0112334555665 45599999999
Q ss_pred CCCCceEEEeccCCC--eEEEEEcCCCCEEEE
Q psy3337 248 VDSGRLRLAREMKES--LSALAVRDDGRFVAV 277 (297)
Q Consensus 248 ~~~~~~~~~~~~~~~--v~~~~~s~dg~~l~~ 277 (297)
..+|+++..+..... ..-+.|.++|+.+++
T Consensus 505 ~~tG~~lw~~~~~~~~~~~p~~y~~~G~~~v~ 536 (677)
T 1kb0_A 505 AATGEKLWEAPTGTGVVAAPSTYMVDGRQYVS 536 (677)
T ss_dssp TTTCCEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred CCCCceeeeeeCCCCcccCCEEEEeCCEEEEE
Confidence 999999998876543 345666788875544
No 245
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.55 E-value=1.6e-05 Score=67.55 Aligned_cols=185 Identities=12% Similarity=0.069 Sum_probs=113.4
Q ss_pred CCCCCceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCeeeEEeccccCCe-----eEE
Q psy3337 92 IDSKEKNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEI-----DDV 165 (297)
Q Consensus 92 ~~~~d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v-----~~~ 165 (297)
.++.++.|.. |..+|+.+-... ............ +..++.++.++.|..+|..+++.+..+....... ...
T Consensus 108 v~~~~g~l~a~d~~tG~~~W~~~-~~~~~~~~p~~~--~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~ 184 (376)
T 3q7m_A 108 IGSEKAQVYALNTSDGTVAWQTK-VAGEALSRPVVS--DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAP 184 (376)
T ss_dssp EEETTSEEEEEETTTCCEEEEEE-CSSCCCSCCEEE--TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCC
T ss_pred EEcCCCEEEEEECCCCCEEEEEe-CCCceEcCCEEE--CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCc
Confidence 3455677776 889998876665 222111111222 4478888899999999999999887765432211 122
Q ss_pred EEccCCCEEEEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCC--CCeEEEEeccCcccccCCCCeE
Q psy3337 166 DFSISGEQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSP--KRSRLFTLANPLAQNKRGISYV 243 (297)
Q Consensus 166 ~~sp~~~~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~--~~~~l~~~~~~~~~~g~~d~~i 243 (297)
... +..++.++.++.+..+|..+|+.+.......+.+..- . ..+..+...| .+..++. ++.++.|
T Consensus 185 ~~~--~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~-~--~~~~~~~~~p~~~~~~v~~--------~~~~g~l 251 (376)
T 3q7m_A 185 TTA--FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTE-I--DRLSDVDTTPVVVNGVVFA--------LAYNGNL 251 (376)
T ss_dssp EEE--TTEEEECCTTTEEEEEETTTCCEEEEEECCC--------------CCCCCCEEETTEEEE--------ECTTSCE
T ss_pred EEE--CCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcc-c--ccccccCCCcEEECCEEEE--------EecCcEE
Confidence 222 3467778889999999999998877665433211000 0 0000000011 1234444 3348899
Q ss_pred EEEeCCCCceEEEeccCCCeEEEEEcCCCCEEEEEecCCCeEEEEEeCCceec
Q psy3337 244 QQWDVDSGRLRLAREMKESLSALAVRDDGRFVAVGTMFTGSVFVYIAFSLQMC 296 (297)
Q Consensus 244 ~~wd~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~~~~~ 296 (297)
..+|..+|+.+....... ...+.. ++..|++++. ++.|..+|..+++.+
T Consensus 252 ~~~d~~tG~~~w~~~~~~-~~~~~~--~~~~l~~~~~-~g~l~~~d~~tG~~~ 300 (376)
T 3q7m_A 252 TALDLRSGQIMWKRELGS-VNDFIV--DGNRIYLVDQ-NDRVMALTIDGGVTL 300 (376)
T ss_dssp EEEETTTCCEEEEECCCC-EEEEEE--ETTEEEEEET-TCCEEEEETTTCCEE
T ss_pred EEEECCCCcEEeeccCCC-CCCceE--ECCEEEEEcC-CCeEEEEECCCCcEE
Confidence 999999998886655332 444444 4677888888 999999999988753
No 246
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.54 E-value=8.6e-06 Score=73.45 Aligned_cols=173 Identities=13% Similarity=0.135 Sum_probs=109.2
Q ss_pred EEEecCCCEEEEEcCC----------------CcEEEEeCCCCeeeEEeccc--cC----CeeE---EEEccCCC---EE
Q psy3337 123 VRLSRNGDLMVTGGTD----------------GHLRLWSFPKMKPLLHIEAH--SK----EIDD---VDFSISGE---QI 174 (297)
Q Consensus 123 ~~~s~~g~~l~s~~~d----------------~~i~iwd~~~~~~~~~~~~~--~~----~v~~---~~~sp~~~---~l 174 (297)
+++.++...++.+..+ +.|..+|..+++.+..++.. .. .+.. +...++|+ .+
T Consensus 240 ~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v 319 (571)
T 2ad6_A 240 YAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLL 319 (571)
T ss_dssp CEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEE
T ss_pred EEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEE
Confidence 5667766666666532 35999999999988777532 11 1111 22224674 57
Q ss_pred EEEeCCCcEEEEEcCCCceeeeeeccC-C---------CCc--------------eEEEEee-----eeeeeeeCCCCeE
Q psy3337 175 VSIAKDGKAFVWNSKNGSLSKELKWNT-P---------DNI--------------KYLFKRC-----RYGLVEDSPKRSR 225 (297)
Q Consensus 175 ~s~~~d~~v~lwd~~~~~~~~~~~~~~-~---------~~~--------------~~~~~~~-----~~~~~~~s~~~~~ 225 (297)
+.++.+|.++++|..+|+.+..+.... . .+. ....... .+..++++|+...
T Consensus 320 ~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~ 399 (571)
T 2ad6_A 320 SHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRT 399 (571)
T ss_dssp EEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTE
T ss_pred EEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCE
Confidence 788899999999999998877654321 0 000 0001100 1134678888777
Q ss_pred EEEeccCc---------------cccc--------------CCCCeEEEEeCCCCceEEEeccCCCeEEEEEcCCCCEEE
Q psy3337 226 LFTLANPL---------------AQNK--------------RGISYVQQWDVDSGRLRLAREMKESLSALAVRDDGRFVA 276 (297)
Q Consensus 226 l~~~~~~~---------------~~~g--------------~~d~~i~~wd~~~~~~~~~~~~~~~v~~~~~s~dg~~l~ 276 (297)
++...... ...| ..++.|..||+.+++.+-.+.....+.+..+...+..++
T Consensus 400 ~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~~~~~~~~~t~gg~v~ 479 (571)
T 2ad6_A 400 LYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFAAWGGTLYTKGGLVW 479 (571)
T ss_dssp EEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEE
T ss_pred EEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCCCCccceeEEECCCEEE
Confidence 77654310 0001 246899999999999887776544433333344566777
Q ss_pred EEecCCCeEEEEEeCCceec
Q psy3337 277 VGTMFTGSVFVYIAFSLQMC 296 (297)
Q Consensus 277 ~~~~~dg~i~vwd~~~~~~~ 296 (297)
+++. ||.|+.||..+++.+
T Consensus 480 ~g~~-dg~l~a~D~~tG~~l 498 (571)
T 2ad6_A 480 YATL-DGYLKALDNKDGKEL 498 (571)
T ss_dssp EECT-TSEEEEEETTTCCEE
T ss_pred EEcC-CCeEEEEECCCCCEE
Confidence 7888 999999999999865
No 247
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.52 E-value=6.7e-07 Score=75.95 Aligned_cols=126 Identities=6% Similarity=-0.078 Sum_probs=88.9
Q ss_pred cEEEEeCCCCeeeEEeccccCCeeEEEEccCCCEEEEEe----------CCCcEEEEEcCCCceeeeeecc---------
Q psy3337 140 HLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIA----------KDGKAFVWNSKNGSLSKELKWN--------- 200 (297)
Q Consensus 140 ~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~----------~d~~v~lwd~~~~~~~~~~~~~--------- 200 (297)
.|.++|..+++.+.++.....+ .+.++||+++++++. .++.|.+||+.+++.+.++..+
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~ 124 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGP 124 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSC
T ss_pred eEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCC
Confidence 7889999999999888755555 799999999988886 3688999999999999888643
Q ss_pred CCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEE--EeCCCCceEEEeccCCCeEEEEEcCCCC-EEEE
Q psy3337 201 TPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQ--WDVDSGRLRLAREMKESLSALAVRDDGR-FVAV 277 (297)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~--wd~~~~~~~~~~~~~~~v~~~~~s~dg~-~l~~ 277 (297)
.|. .+.++|||++++.+.. .....+.+ +|+.+ +..+..... ..+.|+|. .+++
T Consensus 125 ~P~------------~ia~SpDGk~lyVan~------~~~~~v~V~~iD~~t---v~~i~v~~~---~~~~p~g~~~~~~ 180 (368)
T 1mda_H 125 RVH------------IIGNCASSACLLFFLF------GSSAAAGLSVPGASD---DQLTKSASC---FHIHPGAAATHYL 180 (368)
T ss_dssp CTT------------SEEECTTSSCEEEEEC------SSSCEEEEEETTTEE---EEEEECSSC---CCCEEEETTEEEC
T ss_pred Ccc------------eEEEcCCCCEEEEEcc------CCCCeEEEEEEchhh---ceEEECCCc---eEEccCCCeEEEE
Confidence 233 2778999999998753 11356888 99877 344433221 12234443 3334
Q ss_pred EecCCCeEEEEEeCC
Q psy3337 278 GTMFTGSVFVYIAFS 292 (297)
Q Consensus 278 ~~~~dg~i~vwd~~~ 292 (297)
.+. ||.+.+.|+.+
T Consensus 181 ~~~-dg~~~~vd~~~ 194 (368)
T 1mda_H 181 GSC-PASLAASDLAA 194 (368)
T ss_dssp CCC-TTSCEEEECCS
T ss_pred EcC-CCCEEEEECcc
Confidence 445 77777777665
No 248
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.50 E-value=4.2e-06 Score=77.24 Aligned_cols=192 Identities=10% Similarity=0.042 Sum_probs=118.8
Q ss_pred CCCCceEEE-EeeCCCeEEEEecCCCC----------cE-EEEEEecCCCEEEEEcCCCcEEEEeCCCCeeeEEeccc--
Q psy3337 93 DSKEKNLRF-GFKTFDSVQTVFAGSES----------LQ-RVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAH-- 158 (297)
Q Consensus 93 ~~~d~~i~~-~~~~~~~~~~~~~~h~~----------~v-~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~-- 158 (297)
++.++.|.- |..+|+.+-.+. .+.. .+ ..+.+ ++..++.++.|+.|..+|..+|+.+..+...
T Consensus 76 ~~~~~~v~AlD~~tG~~~W~~~-~~~~~~~~~~~~~~~~~~~~~~--~~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~ 152 (689)
T 1yiq_A 76 TGPFSVVYALDARDGRLIWKYD-PQSDRHRAGEACCDAVNRGVAV--WKGKVYVGVLDGRLEAIDAKTGQRAWSVDTRAD 152 (689)
T ss_dssp ECGGGCEEEEETTTCCEEEEEC-CCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCSC
T ss_pred EcCCCeEEEEECCCCceeEEEc-CCCCccccccccccCCCCccEE--ECCEEEEEccCCEEEEEECCCCCEeeeecCcCC
Confidence 344566666 889999887775 2211 00 11222 3567888899999999999999988777542
Q ss_pred cCCeeEEEEcc---CCCEEEEEe-----CCCcEEEEEcCCCceeeeeecc--CCCCc----eE---------------EE
Q psy3337 159 SKEIDDVDFSI---SGEQIVSIA-----KDGKAFVWNSKNGSLSKELKWN--TPDNI----KY---------------LF 209 (297)
Q Consensus 159 ~~~v~~~~~sp---~~~~l~s~~-----~d~~v~lwd~~~~~~~~~~~~~--~~~~~----~~---------------~~ 209 (297)
......+..+| ++..++..+ .++.|+.||..+|+.+-.+... .|... .+ .-
T Consensus 153 ~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~ 232 (689)
T 1yiq_A 153 HKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGG 232 (689)
T ss_dssp TTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCE
T ss_pred CCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCceeeecCC
Confidence 11111122222 444443322 3789999999999988776521 11100 00 00
Q ss_pred EeeeeeeeeeCCCCeEEEEeccCcccccCCCC-------------------eEEEEeCCCCceEEEecc--CC-------
Q psy3337 210 KRCRYGLVEDSPKRSRLFTLANPLAQNKRGIS-------------------YVQQWDVDSGRLRLAREM--KE------- 261 (297)
Q Consensus 210 ~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~-------------------~i~~wd~~~~~~~~~~~~--~~------- 261 (297)
....+..++++|+...++.... ++ .|..||..+|+.+-.+.. +.
T Consensus 233 g~~~w~~~~~d~~~~~vy~~~~--------~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~ 304 (689)
T 1yiq_A 233 GGTAWDSFAYDPELNLLYIGVG--------NGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTAT 304 (689)
T ss_dssp ECCCCSCEEEETTTTEEEEECC--------CEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCC
T ss_pred CCccccceeEcCCCCEEEEeCC--------CCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCC
Confidence 1111234677888777777543 33 499999999999877654 21
Q ss_pred -CeEEEEEcCCCC---EEEEEecCCCeEEEEEeCCceec
Q psy3337 262 -SLSALAVRDDGR---FVAVGTMFTGSVFVYIAFSLQMC 296 (297)
Q Consensus 262 -~v~~~~~s~dg~---~l~~~~~~dg~i~vwd~~~~~~~ 296 (297)
.+....+..+|+ .|+.++. +|.++++|..+|+.+
T Consensus 305 ~~~~l~d~~~~G~~~~~v~~~~~-~G~l~~lD~~tG~~l 342 (689)
T 1yiq_A 305 QHMILAELPIDGKPRKVLMQAPK-NGFFYVIDRATGELL 342 (689)
T ss_dssp SCEEEEEEEETTEEEEEEEECCT-TSEEEEEETTTCCEE
T ss_pred CCcEEEeeccCCcEEEEEEEECC-CCeEEEEECCCCCEe
Confidence 122223333665 7888998 999999999999875
No 249
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.50 E-value=2.2e-06 Score=79.93 Aligned_cols=158 Identities=8% Similarity=0.070 Sum_probs=95.6
Q ss_pred cEEEEEEe-cCCCEEEEEcC-C----CcEEEEeCCCC-eeeE-EeccccCCeeEEEEccCCCEEEEEeCC-----CcEEE
Q psy3337 119 LQRVVRLS-RNGDLMVTGGT-D----GHLRLWSFPKM-KPLL-HIEAHSKEIDDVDFSISGEQIVSIAKD-----GKAFV 185 (297)
Q Consensus 119 ~v~~~~~s-~~g~~l~s~~~-d----~~i~iwd~~~~-~~~~-~~~~~~~~v~~~~~sp~~~~l~s~~~d-----~~v~l 185 (297)
.+...+|| |||++||.+.. + ..|+++|+.++ +.+. .+. .....+.|+||++.|+....| ..|++
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~ 251 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENKVWR 251 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCCEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCCCCEEEE
Confidence 57789999 99998885432 2 25999999988 6321 111 124578999999888776654 25778
Q ss_pred EEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCCC--ce--EEEeccCC
Q psy3337 186 WNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSG--RL--RLAREMKE 261 (297)
Q Consensus 186 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~--~~--~~~~~~~~ 261 (297)
+++.++.....+....+.. .+. ..+.|+|||++|+.... ......|+++|+.++ +. ........
T Consensus 252 ~~lgt~~~~~~lv~~~~~~-~~~------~~~~~SpDg~~l~~~~~-----~~~~~~l~~~d~~~~~~~~~~~~l~~~~~ 319 (751)
T 2xe4_A 252 HVMGKLQSEDVCLYEEHNP-LFS------AFMYKAADTNTLCIGSQ-----SPETAEVHLLDLRKGNAHNTLEIVRPREK 319 (751)
T ss_dssp EETTSCGGGCEEEEECCCT-TCE------EEEEECTTSSEEEEEEE-----CSSCEEEEEEESSSCTTCCCEEESSCCCT
T ss_pred EECCCCchhcEEEEecCCC-ceE------EEEEECCCCCEEEEEec-----CCCCceEEEEECCCCCCCceeEEeecCCC
Confidence 8887664221111111111 111 23678999999888664 334668999999875 33 33333333
Q ss_pred C-eEEEEEcCCCCEEEEEecCC----CeEEEEEeCC
Q psy3337 262 S-LSALAVRDDGRFVAVGTMFT----GSVFVYIAFS 292 (297)
Q Consensus 262 ~-v~~~~~s~dg~~l~~~~~~d----g~i~vwd~~~ 292 (297)
. ..++.|+.++.+++.... + ..|.++|+.+
T Consensus 320 ~~~~s~~~~~g~~l~~~t~~-~~a~~~~L~~~d~~~ 354 (751)
T 2xe4_A 320 GVRYDVQMHGTSHLVILTNE-GGAVNHKLLIAPRGQ 354 (751)
T ss_dssp TCCEEEEEETTTEEEEEECT-TTCTTCEEEEEETTS
T ss_pred CceEEEeeeeCCEEEEEeCC-CCCCCcEEEEEcCCC
Confidence 3 566665544444444443 3 3677777654
No 250
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.47 E-value=2e-05 Score=71.17 Aligned_cols=157 Identities=15% Similarity=0.080 Sum_probs=98.6
Q ss_pred CcEEEEeCCCCeeeEEecc--ccC----CeeE-EEEc---cCCC---EEEEEeCCCcEEEEEcCCCceeeeeeccCCC--
Q psy3337 139 GHLRLWSFPKMKPLLHIEA--HSK----EIDD-VDFS---ISGE---QIVSIAKDGKAFVWNSKNGSLSKELKWNTPD-- 203 (297)
Q Consensus 139 ~~i~iwd~~~~~~~~~~~~--~~~----~v~~-~~~s---p~~~---~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~-- 203 (297)
+.|..+|..+++.+..++. |.. .+.. +.+. .+|+ .++.++.+|.++++|..+|+.+..+......
T Consensus 291 ~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~ 370 (582)
T 1flg_A 291 SGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITW 370 (582)
T ss_dssp SEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCS
T ss_pred ceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCccc
Confidence 5799999999999887753 321 1111 1222 4664 6788999999999999999988766543200
Q ss_pred ----------------------------CceEEEEeee-----eeeeeeCCCCeEEEEeccCcc---------------c
Q psy3337 204 ----------------------------NIKYLFKRCR-----YGLVEDSPKRSRLFTLANPLA---------------Q 235 (297)
Q Consensus 204 ----------------------------~~~~~~~~~~-----~~~~~~s~~~~~l~~~~~~~~---------------~ 235 (297)
.......... +..++++|+...++....... .
T Consensus 371 ~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~ 450 (582)
T 1flg_A 371 ASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAY 450 (582)
T ss_dssp EEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCC
T ss_pred cccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCce
Confidence 0000111110 124567777666665432100 0
Q ss_pred c----------cCCCCeEEEEeCCCCceEEEeccCCCeEEEEEcCCCCEEEEEecCCCeEEEEEeCCceec
Q psy3337 236 N----------KRGISYVQQWDVDSGRLRLAREMKESLSALAVRDDGRFVAVGTMFTGSVFVYIAFSLQMC 296 (297)
Q Consensus 236 ~----------g~~d~~i~~wd~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~~~~~ 296 (297)
. ...++.|..||+.+++.+-.......+..-.+...+..++.++. ||.++.||..+|+.+
T Consensus 451 ~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g~~-dg~l~A~D~~tG~~l 520 (582)
T 1flg_A 451 LGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTGTG-DGYFKAFDAKSGKEL 520 (582)
T ss_dssp CCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEEECT-TSEEEEEETTTCCEE
T ss_pred eccceeecCCCCCCcceEEEEECCCCCEEEEecCCCCCcccceEeCCCEEEEECC-CCcEEEEECCCCCEE
Confidence 0 12468999999999998876655433322222235677888999 999999999999875
No 251
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.46 E-value=1.1e-05 Score=67.10 Aligned_cols=171 Identities=10% Similarity=0.027 Sum_probs=108.6
Q ss_pred CCCCceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCeeeEEeccccCCeeEEEEccCC
Q psy3337 93 DSKEKNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISG 171 (297)
Q Consensus 93 ~~~d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~ 171 (297)
++.++.+.. +.. ++...... .+...+.++...+++. |+.++.++.|..||.. ++.+..+......+.++.+.+++
T Consensus 113 ~t~~~~l~~~d~~-g~~~~~~~-~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g 188 (330)
T 3hxj_A 113 TSMDGHLYAINTD-GTEKWRFK-TKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDG 188 (330)
T ss_dssp ECTTSEEEEECTT-SCEEEEEE-CSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTC
T ss_pred EecCCEEEEEcCC-CCEEEEEc-CCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCC
Confidence 344555555 665 66655554 4444556667777776 6667788999999988 87777776556677888888888
Q ss_pred CEEEEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCCC
Q psy3337 172 EQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSG 251 (297)
Q Consensus 172 ~~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~ 251 (297)
.+++. + +.|..|| .+++.+..+..... .+..+...+++...+. +.++.|..+|. ++
T Consensus 189 ~l~v~-t--~~l~~~d-~~g~~~~~~~~~~~----------~~~~~~~~~~g~l~v~---------t~~~gl~~~~~-~g 244 (330)
T 3hxj_A 189 TIYFG-S--DKVYAIN-PDGTEKWNFYAGYW----------TVTRPAISEDGTIYVT---------SLDGHLYAINP-DG 244 (330)
T ss_dssp CEEEE-S--SSEEEEC-TTSCEEEEECCSSC----------CCSCCEECTTSCEEEE---------ETTTEEEEECT-TS
T ss_pred EEEEE-e--CEEEEEC-CCCcEEEEEccCCc----------ceeceEECCCCeEEEE---------cCCCeEEEECC-CC
Confidence 75554 4 7899999 67766655443211 1223445667654433 23678888874 46
Q ss_pred ceEEEeccCCC-eEEEEEcCCCCEEEEEecCCCeEEEEEeCCce
Q psy3337 252 RLRLAREMKES-LSALAVRDDGRFVAVGTMFTGSVFVYIAFSLQ 294 (297)
Q Consensus 252 ~~~~~~~~~~~-v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~~~ 294 (297)
+.+..+..... +.++.+.+++ .|.+++. +|.|..+|. +++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~g-~l~v~t~-~ggl~~~d~-~g~ 285 (330)
T 3hxj_A 245 TEKWRFKTGKRIESSPVIGNTD-TIYFGSY-DGHLYAINP-DGT 285 (330)
T ss_dssp CEEEEEECSSCCCSCCEECTTS-CEEEECT-TCEEEEECT-TSC
T ss_pred CEeEEeeCCCCccccceEcCCC-eEEEecC-CCCEEEECC-CCc
Confidence 65555554443 4556665555 4566776 888888885 554
No 252
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.45 E-value=2.3e-05 Score=70.89 Aligned_cols=200 Identities=13% Similarity=0.131 Sum_probs=125.2
Q ss_pred CceEEE-EeeCCCeEEEEecCCCCc------------------------------------E-EEEEEecCCCEEEEEcC
Q psy3337 96 EKNLRF-GFKTFDSVQTVFAGSESL------------------------------------Q-RVVRLSRNGDLMVTGGT 137 (297)
Q Consensus 96 d~~i~~-~~~~~~~~~~~~~~h~~~------------------------------------v-~~~~~s~~g~~l~s~~~ 137 (297)
++.|+- |..+|+.+-.+....... + ...++.++..+++.+..
T Consensus 181 ~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g 260 (599)
T 1w6s_A 181 RGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTG 260 (599)
T ss_dssp CCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECC
T ss_pred CCeEEEEECCCCcEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCC
Confidence 678887 999999887765221110 0 13456677777777765
Q ss_pred C----------------CcEEEEeCCCCeeeEEeccccCC------e---eEEEEc-cCC---CEEEEEeCCCcEEEEEc
Q psy3337 138 D----------------GHLRLWSFPKMKPLLHIEAHSKE------I---DDVDFS-ISG---EQIVSIAKDGKAFVWNS 188 (297)
Q Consensus 138 d----------------~~i~iwd~~~~~~~~~~~~~~~~------v---~~~~~s-p~~---~~l~s~~~d~~v~lwd~ 188 (297)
+ +.|..+|..+++.+..++..... + .-+... .+| ..++.++.+|.++++|.
T Consensus 261 ~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~ 340 (599)
T 1w6s_A 261 NPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDR 340 (599)
T ss_dssp CCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEET
T ss_pred CCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEEC
Confidence 5 37999999999988777643211 1 112222 467 46777889999999999
Q ss_pred CCCceeeeeeccC----------CCC--------------ceEEEEe-----eeeeeeeeCCCCeEEEEeccC-------
Q psy3337 189 KNGSLSKELKWNT----------PDN--------------IKYLFKR-----CRYGLVEDSPKRSRLFTLANP------- 232 (297)
Q Consensus 189 ~~~~~~~~~~~~~----------~~~--------------~~~~~~~-----~~~~~~~~s~~~~~l~~~~~~------- 232 (297)
++|+.+....... ..+ ....... ..+..++++|+...++.....
T Consensus 341 ~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~ 420 (599)
T 1w6s_A 341 TDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEP 420 (599)
T ss_dssp TTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEE
T ss_pred CCCCEeecccccCCcccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeec
Confidence 9999887654221 000 0000000 112356778887777664321
Q ss_pred ----------cc------cc--cC------CCCeEEEEeCCCCceEEEeccCCCeEEEEEcCCCCEEEEEecCCCeEEEE
Q psy3337 233 ----------LA------QN--KR------GISYVQQWDVDSGRLRLAREMKESLSALAVRDDGRFVAVGTMFTGSVFVY 288 (297)
Q Consensus 233 ----------~~------~~--g~------~d~~i~~wd~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~dg~i~vw 288 (297)
.+ .. .+ ..+.|..||+.+++.+-.......+.+-.+...+..++.++. ||.|+.|
T Consensus 421 ~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagg~vf~gt~-dg~l~A~ 499 (599)
T 1w6s_A 421 FMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKMERFAVWGGTMATAGDLVFYGTL-DGYLKAR 499 (599)
T ss_dssp CCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECT-TSEEEEE
T ss_pred ccccccCCcceecccceeccCCcCCcccCCCcCeEEEEECCCCCEEeEecCCCCccCcceEecCCEEEEECC-CCeEEEE
Confidence 10 00 01 458999999999998877654332222222335677778998 9999999
Q ss_pred EeCCceec
Q psy3337 289 IAFSLQMC 296 (297)
Q Consensus 289 d~~~~~~~ 296 (297)
|..+|+.+
T Consensus 500 D~~tG~~l 507 (599)
T 1w6s_A 500 DSDTGDLL 507 (599)
T ss_dssp ETTTCCEE
T ss_pred ECCCCCEE
Confidence 99999875
No 253
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.39 E-value=2.7e-05 Score=64.60 Aligned_cols=172 Identities=11% Similarity=0.116 Sum_probs=110.3
Q ss_pred CCCCceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCeeeEEeccccCCeeEEEEccCC
Q psy3337 93 DSKEKNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISG 171 (297)
Q Consensus 93 ~~~d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~ 171 (297)
++.++.|.. +.. ++.+..+. .....+.++.+.+++..++ ++ +.|..+| .+++.+..+......+.++...+++
T Consensus 153 gt~~~~l~~~d~~-g~~~~~~~-~~~~~~~~~~~d~~g~l~v-~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g 226 (330)
T 3hxj_A 153 GSNDNYLYAINPD-GTEKWRFK-TNDAITSAASIGKDGTIYF-GS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDG 226 (330)
T ss_dssp ECTTSEEEEECTT-SCEEEEEE-CSSCCCSCCEECTTCCEEE-ES--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTS
T ss_pred EcCCCEEEEECCC-CCEeEEEe-cCCCceeeeEEcCCCEEEE-Ee--CEEEEEC-CCCcEEEEEccCCcceeceEECCCC
Confidence 344455555 666 66665655 4445566777777877544 44 7899999 7777777776666678889998887
Q ss_pred CEEEEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCCC
Q psy3337 172 EQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSG 251 (297)
Q Consensus 172 ~~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~ 251 (297)
.+ ..++.++.|..+|. ++..+..+....+. ...+...+++. |+. ++.++.|..+|. ++
T Consensus 227 ~l-~v~t~~~gl~~~~~-~g~~~~~~~~~~~~----------~~~~~~~~~g~-l~v--------~t~~ggl~~~d~-~g 284 (330)
T 3hxj_A 227 TI-YVTSLDGHLYAINP-DGTEKWRFKTGKRI----------ESSPVIGNTDT-IYF--------GSYDGHLYAINP-DG 284 (330)
T ss_dssp CE-EEEETTTEEEEECT-TSCEEEEEECSSCC----------CSCCEECTTSC-EEE--------ECTTCEEEEECT-TS
T ss_pred eE-EEEcCCCeEEEECC-CCCEeEEeeCCCCc----------cccceEcCCCe-EEE--------ecCCCCEEEECC-CC
Confidence 54 45567788888874 56555554432211 01123345554 444 334778999996 67
Q ss_pred ceEEEeccCCC-eEEEEEcCCCCEEEEEecCCCeEEEEEeCCce
Q psy3337 252 RLRLAREMKES-LSALAVRDDGRFVAVGTMFTGSVFVYIAFSLQ 294 (297)
Q Consensus 252 ~~~~~~~~~~~-v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~~~ 294 (297)
+.+..+..... +.++...++|.+ ..++. +|.+++...+..+
T Consensus 285 ~~~~~~~~~~~~~~~~~~d~~g~l-~~gt~-~G~~~~~~~~~~~ 326 (330)
T 3hxj_A 285 TEKWNFETGSWIIATPVIDENGTI-YFGTR-NGKFYALFNLEHH 326 (330)
T ss_dssp CEEEEEECSSCCCSCCEECTTCCE-EEECT-TSCEEEEEC----
T ss_pred cEEEEEEcCCccccceEEcCCCEE-EEEcC-CCeEEEEeccccc
Confidence 77766665544 778888788764 55777 9999988765443
No 254
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.38 E-value=3.9e-05 Score=63.80 Aligned_cols=165 Identities=12% Similarity=0.093 Sum_probs=101.7
Q ss_pred EEEEEEecCCCEEEEEcCCCcEEEEeCCCCeeeEEecc--------------------ccCCeeEEEEcc-CCCEEEEEe
Q psy3337 120 QRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEA--------------------HSKEIDDVDFSI-SGEQIVSIA 178 (297)
Q Consensus 120 v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~--------------------~~~~v~~~~~sp-~~~~l~s~~ 178 (297)
..+++|+++|++++++..++.|..||..+++.. .+.. ....+..+++.+ +++ |+.+.
T Consensus 21 p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~-l~v~d 98 (322)
T 2fp8_A 21 PNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ-LYIVD 98 (322)
T ss_dssp CCCEECCTTCSSEEEECTTSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE-EEEEE
T ss_pred ceEEEEcCCCCEEEEEcCCCeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcCCCCc-EEEEE
Confidence 357889999987888888999999998765432 2210 113578999998 555 55554
Q ss_pred CCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCC-CCeEEEEeccC---------cccccCCCCeEEEEeC
Q psy3337 179 KDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSP-KRSRLFTLANP---------LAQNKRGISYVQQWDV 248 (297)
Q Consensus 179 ~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-~~~~l~~~~~~---------~~~~g~~d~~i~~wd~ 248 (297)
..+.|..+|..++.. ..+..... + . .......+++.+ +|...++-... .+..+...+.|..||.
T Consensus 99 ~~~~i~~~d~~~g~~-~~~~~~~~-~--~--~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~ 172 (322)
T 2fp8_A 99 CYYHLSVVGSEGGHA-TQLATSVD-G--V--PFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDP 172 (322)
T ss_dssp TTTEEEEECTTCEEC-EEEESEET-T--E--ECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEET
T ss_pred CCCCEEEEeCCCCEE-EEecccCC-C--C--cccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeC
Confidence 555588888765432 22221100 0 0 011234577899 88765553220 0011233578999998
Q ss_pred CCCceEEEeccCCCeEEEEEcCCCCEEEEEecCCCeEEEEEeCC
Q psy3337 249 DSGRLRLAREMKESLSALAVRDDGRFVAVGTMFTGSVFVYIAFS 292 (297)
Q Consensus 249 ~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~ 292 (297)
.+++.......-.....++|+|+|++|+++....+.|.+|++..
T Consensus 173 ~~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~ 216 (322)
T 2fp8_A 173 STKETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEG 216 (322)
T ss_dssp TTTEEEEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSS
T ss_pred CCCEEEEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCC
Confidence 87765433332233678999999997766643168999999864
No 255
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.32 E-value=0.00012 Score=63.57 Aligned_cols=151 Identities=9% Similarity=0.073 Sum_probs=92.7
Q ss_pred EEEEEEec-CCCEEEEEcCCCcEEEEeCCCCeeeEEeccccCCeeEEEEccCCCEEEEEeCC-C----cEEEEEcCCCce
Q psy3337 120 QRVVRLSR-NGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAKD-G----KAFVWNSKNGSL 193 (297)
Q Consensus 120 v~~~~~s~-~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~d-~----~v~lwd~~~~~~ 193 (297)
...++++| ++..|+.+...+.|+.+|+..+...... ........++|++++++|+.+... + .+.+++. .+..
T Consensus 139 P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~-~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g~~ 216 (430)
T 3tc9_A 139 AVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVY-SGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ESGF 216 (430)
T ss_dssp CCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEE-CCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GGTS
T ss_pred CCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEe-cCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CCce
Confidence 45889998 3545555555488999998776644333 344568899999999966666542 2 2333443 3322
Q ss_pred e--eeeeccCCCCceEEEEeeeeeeeeeCC-CCeEEEEeccCcccccCCCCeEEEEeCCCCceEEEecc--CCCeEEEEE
Q psy3337 194 S--KELKWNTPDNIKYLFKRCRYGLVEDSP-KRSRLFTLANPLAQNKRGISYVQQWDVDSGRLRLAREM--KESLSALAV 268 (297)
Q Consensus 194 ~--~~~~~~~~~~~~~~~~~~~~~~~~~s~-~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~--~~~v~~~~~ 268 (297)
. ..+.. ......++++| ++..+++-. ..+.|..++...+........ ......++|
T Consensus 217 ~~~~~l~~-----------~~~p~giavdp~~g~lyv~d~--------~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~ 277 (430)
T 3tc9_A 217 KVITELTK-----------GQNCNGAETHPINGELYFNSW--------NAGQVFRYDFTTQETTPLFTIQDSGWEFHIQF 277 (430)
T ss_dssp CSEEEEEE-----------CSSCCCEEECTTTCCEEEEET--------TTTEEEEEETTTTEEEEEEECSSSSCCEEEEE
T ss_pred eeeeeecc-----------CCCceEEEEeCCCCEEEEEEC--------CCCEEEEEECCCCcEEEEEEcCCCCcceeEEE
Confidence 1 11110 01112367899 555444422 367899999987654332222 233789999
Q ss_pred cCCCCEEEEEecCCCeEEEEEeC
Q psy3337 269 RDDGRFVAVGTMFTGSVFVYIAF 291 (297)
Q Consensus 269 s~dg~~l~~~~~~dg~i~vwd~~ 291 (297)
+|+|++|+.+....+.|..++..
T Consensus 278 ~pdG~~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 278 HPSGNYAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp CTTSSEEEEEETTTTEEEEEEEE
T ss_pred cCCCCEEEEEECCCCEEEEEeCC
Confidence 99999666655437889998865
No 256
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.29 E-value=0.00056 Score=56.73 Aligned_cols=176 Identities=6% Similarity=-0.100 Sum_probs=106.6
Q ss_pred eEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCC-EEEEEcCCCcEEEEeCCC----CeeeEEeccccCCeeEEEEccCC
Q psy3337 98 NLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGD-LMVTGGTDGHLRLWSFPK----MKPLLHIEAHSKEIDDVDFSISG 171 (297)
Q Consensus 98 ~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~-~l~s~~~d~~i~iwd~~~----~~~~~~~~~~~~~v~~~~~sp~~ 171 (297)
.|+. ++.+.+....+ .......+++|++.++ .+++-...+.|..+++.. ......+...-.....+++.+.+
T Consensus 11 ~I~~i~~~~~~~~~~~--~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~ 88 (316)
T 1ijq_A 11 EVRKMTLDRSEYTSLI--PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIH 88 (316)
T ss_dssp SEEEEETTSCCCEEEE--CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTT
T ss_pred eEEEEECCCcceEehh--cCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecC
Confidence 4666 88777665544 3344567999998654 455556678999999875 22222232223456789998755
Q ss_pred CEE-EEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCC
Q psy3337 172 EQI-VSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDS 250 (297)
Q Consensus 172 ~~l-~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~ 250 (297)
..| ++-...+.|.++|+... ....+.... . .....++++|.+..|+.+.. + ..+.|..+++..
T Consensus 89 ~~ly~~d~~~~~I~~~~~~g~-~~~~~~~~~-~--------~~P~~iavdp~~g~ly~~d~-----~-~~~~I~~~~~dG 152 (316)
T 1ijq_A 89 SNIYWTDSVLGTVSVADTKGV-KRKTLFREN-G--------SKPRAIVVDPVHGFMYWTDW-----G-TPAKIKKGGLNG 152 (316)
T ss_dssp TEEEEEETTTTEEEEEETTSS-SEEEEEECT-T--------CCEEEEEEETTTTEEEEEEC-----S-SSCEEEEEETTS
T ss_pred CeEEEEECCCCEEEEEeCCCC-ceEEEEECC-C--------CCcceEEeCCCCCEEEEEcc-----C-CCCeEEEEcCCC
Confidence 545 44456788999998643 222222110 0 01224677887666666543 1 136888888864
Q ss_pred CceEEEe-cc-CCCeEEEEEcCCCCEEEEEecCCCeEEEEEeCC
Q psy3337 251 GRLRLAR-EM-KESLSALAVRDDGRFVAVGTMFTGSVFVYIAFS 292 (297)
Q Consensus 251 ~~~~~~~-~~-~~~v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~ 292 (297)
.....+ .. -.....++++|++..|..+....+.|..+|+..
T Consensus 153 -~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg 195 (316)
T 1ijq_A 153 -VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 195 (316)
T ss_dssp -CCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred -CCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCC
Confidence 333333 22 233889999998877776665367899999753
No 257
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.22 E-value=0.00071 Score=54.09 Aligned_cols=184 Identities=10% Similarity=0.081 Sum_probs=111.1
Q ss_pred CCceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCee---eEEec------cccCCeeE
Q psy3337 95 KEKNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKP---LLHIE------AHSKEIDD 164 (297)
Q Consensus 95 ~d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~---~~~~~------~~~~~v~~ 164 (297)
.++.|.. +.. ++.++.+..+-....-.+++.+++.++++.-.++.+.++++..... +.... ........
T Consensus 47 ~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EG 125 (255)
T 3qqz_A 47 KPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEG 125 (255)
T ss_dssp TTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEE
T ss_pred CCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcce
Confidence 3555555 776 7877777523224467899999988777776788899998764332 22221 12345689
Q ss_pred EEEccCCCEEEEEeCCCcEEEEEcC---CCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCC
Q psy3337 165 VDFSISGEQIVSIAKDGKAFVWNSK---NGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGIS 241 (297)
Q Consensus 165 ~~~sp~~~~l~s~~~d~~v~lwd~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~ 241 (297)
|+|+|.+..|+++.......+|.+. ....+..+....... . .....+..++++|....++.++. ...
T Consensus 126 LA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~-~--~~~~d~S~l~~dp~tg~lliLS~-------~s~ 195 (255)
T 3qqz_A 126 LAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQR-Q--FTLDDVSGAEFNQQKNTLLVLSH-------ESR 195 (255)
T ss_dssp EEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHH-T--CCSSCCCEEEEETTTTEEEEEET-------TTT
T ss_pred EEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhcc-c--cccCCceeEEEcCCCCeEEEEEC-------CCC
Confidence 9999998777766655455555543 111122211100000 0 00112456888998777777654 468
Q ss_pred eEEEEeCCCCceEEEeccC----------CCeEEEEEcCCCCEEEEEecCCCeEEEEEeCC
Q psy3337 242 YVQQWDVDSGRLRLAREMK----------ESLSALAVRDDGRFVAVGTMFTGSVFVYIAFS 292 (297)
Q Consensus 242 ~i~~wd~~~~~~~~~~~~~----------~~v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~ 292 (297)
.|..+|.. |+.+..+... .....|+|.++|+..+ .++ .+.+++|.-.+
T Consensus 196 ~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyI-vsE-~n~~y~f~~~~ 253 (255)
T 3qqz_A 196 ALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYI-VSE-PNRFYRFTPQS 253 (255)
T ss_dssp EEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEE-EET-TTEEEEEEC--
T ss_pred eEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEE-EcC-CceEEEEEecC
Confidence 89999977 5566555432 2378999999998444 466 67777776543
No 258
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.19 E-value=7.9e-05 Score=68.51 Aligned_cols=195 Identities=14% Similarity=0.122 Sum_probs=117.1
Q ss_pred CCCCceEEE-EeeCCCeEEEEecCCCC---------cE-EEEEEecCCCEEEEEcCCCcEEEEeCCCCeeeEEecccc--
Q psy3337 93 DSKEKNLRF-GFKTFDSVQTVFAGSES---------LQ-RVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHS-- 159 (297)
Q Consensus 93 ~~~d~~i~~-~~~~~~~~~~~~~~h~~---------~v-~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-- 159 (297)
++.++.|.- |..+|+.+-.+...... .+ ..+++ .+..++.++.|+.|..+|..+|+.+..+....
T Consensus 72 ~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~ 149 (668)
T 1kv9_A 72 SMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVAL--WGDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPA 149 (668)
T ss_dssp EEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--EBTEEEEECTTSEEEEEETTTCCEEEEEECSCTT
T ss_pred ECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEE--ECCEEEEEcCCCEEEEEECCCCCEeeeeccCCCC
Confidence 334556665 88899888776511110 00 11222 35578888899999999999999887775421
Q ss_pred --CCeeE-EEEccCCCEEEEEeC------CCcEEEEEcCCCceeeeeecc--CCCCce----E---------------EE
Q psy3337 160 --KEIDD-VDFSISGEQIVSIAK------DGKAFVWNSKNGSLSKELKWN--TPDNIK----Y---------------LF 209 (297)
Q Consensus 160 --~~v~~-~~~sp~~~~l~s~~~------d~~v~lwd~~~~~~~~~~~~~--~~~~~~----~---------------~~ 209 (297)
..+.+ ..+ .++ .++.+.. ++.|+.+|..+|+.+-.+... .|.... + ..
T Consensus 150 ~~~~~~~~P~v-~~~-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~ 227 (668)
T 1kv9_A 150 KPYSITGAPRV-VKG-KVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGG 227 (668)
T ss_dssp SSCBCCSCCEE-ETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCE
T ss_pred CcceecCCCEE-ECC-EEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCC
Confidence 11111 111 134 4444432 589999999999998777532 111100 0 00
Q ss_pred EeeeeeeeeeCCCCeEEEEeccCcccccC-----------C----CCeEEEEeCCCCceEEEeccC----------CCeE
Q psy3337 210 KRCRYGLVEDSPKRSRLFTLANPLAQNKR-----------G----ISYVQQWDVDSGRLRLAREMK----------ESLS 264 (297)
Q Consensus 210 ~~~~~~~~~~s~~~~~l~~~~~~~~~~g~-----------~----d~~i~~wd~~~~~~~~~~~~~----------~~v~ 264 (297)
....+..++++|+...++..... +. . .+.|..+|..+|+.+-.++.. ..+.
T Consensus 228 gg~~w~~~a~d~~~~~vy~~~~~----g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~ 303 (668)
T 1kv9_A 228 GGTVWDSMAYDPELDLLYVGTGN----GSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQIT 303 (668)
T ss_dssp ECCCCSCEEEETTTTEEEEECCC----EESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEE
T ss_pred CCccccceEEcCCCCEEEEeCCC----CCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcE
Confidence 11112245677777777664330 00 0 125999999999988776542 1222
Q ss_pred EEEEcCCCC---EEEEEecCCCeEEEEEeCCceec
Q psy3337 265 ALAVRDDGR---FVAVGTMFTGSVFVYIAFSLQMC 296 (297)
Q Consensus 265 ~~~~s~dg~---~l~~~~~~dg~i~vwd~~~~~~~ 296 (297)
...+..+|+ .|+.++. +|.++++|..+|+.+
T Consensus 304 ~~d~~~~G~~~~~v~~~~~-~G~l~~lD~~tG~~l 337 (668)
T 1kv9_A 304 LAELNIDGKPRKVLMQAPK-NGFFYVLDRTNGKLI 337 (668)
T ss_dssp EEEEEETTEEEEEEEECCT-TSEEEEEETTTCCEE
T ss_pred EEEeccCCcEEEEEEEECC-CCEEEEEECCCCCEe
Confidence 223334775 6888888 999999999999875
No 259
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.18 E-value=0.00016 Score=59.68 Aligned_cols=162 Identities=6% Similarity=0.011 Sum_probs=104.1
Q ss_pred CCcEEEEEEecCCCEEE-EEcCCCcEEEEeCCCCeeeE-Eecc----cc--CCeeEEEE---ccCCCEEEEEe-------
Q psy3337 117 ESLQRVVRLSRNGDLMV-TGGTDGHLRLWSFPKMKPLL-HIEA----HS--KEIDDVDF---SISGEQIVSIA------- 178 (297)
Q Consensus 117 ~~~v~~~~~s~~g~~l~-s~~~d~~i~iwd~~~~~~~~-~~~~----~~--~~v~~~~~---sp~~~~l~s~~------- 178 (297)
...-.++.|++....|. +.-..++|..||...+.... .+.. .. ..+..|.| .|+++++++..
T Consensus 12 ~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~ 91 (334)
T 2p9w_A 12 NLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNF 91 (334)
T ss_dssp TCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCT
T ss_pred ccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccc
Confidence 33345889988554454 55579999999987554332 2322 11 13679999 68887777543
Q ss_pred ------CCCcEEEEEcC---CCceeeeeeccC--CC-----CceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCC-C
Q psy3337 179 ------KDGKAFVWNSK---NGSLSKELKWNT--PD-----NIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGI-S 241 (297)
Q Consensus 179 ------~d~~v~lwd~~---~~~~~~~~~~~~--~~-----~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d-~ 241 (297)
.+..|..||+. +++.+....... .. +..+ ...+.++..++|+..++.+. . +
T Consensus 92 ~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~----~~~nDvavD~~GnaYVt~s~--------~~~ 159 (334)
T 2p9w_A 92 ADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRP----FGVVQSAQDRDGNSYVAFAL--------GMP 159 (334)
T ss_dssp TSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCC----EEEEEEEECTTSCEEEEEEE--------SSC
T ss_pred cccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccc----cCCceeEECCCCCEEEeCCC--------CCC
Confidence 26779999998 777765554211 00 0000 12346788999987777544 4 6
Q ss_pred eEEEEeCCCCceEEEec--c---CCC--eEEEEEcCCCCEEEEEecCCCeEEEEEeCC
Q psy3337 242 YVQQWDVDSGRLRLARE--M---KES--LSALAVRDDGRFVAVGTMFTGSVFVYIAFS 292 (297)
Q Consensus 242 ~i~~wd~~~~~~~~~~~--~---~~~--v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~ 292 (297)
.|..++.... .+..+. . ... .+.|+++|+|..|++... .|.|..+|+.+
T Consensus 160 ~I~rV~pdG~-~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~-~g~L~~fD~~~ 215 (334)
T 2p9w_A 160 AIARVSADGK-TVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG-PRALTAFDVSK 215 (334)
T ss_dssp EEEEECTTSC-CEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS-SSSEEEEECSS
T ss_pred eEEEEeCCCC-EEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC-CCeEEEEcCCC
Confidence 6777776633 222221 1 111 679999999999999998 99999999763
No 260
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.14 E-value=0.0019 Score=54.37 Aligned_cols=177 Identities=8% Similarity=-0.021 Sum_probs=105.9
Q ss_pred eEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCE-EEEEcCCCcEEEEeCCCCeeeEEeccccCCeeEEEEccCCCEE-
Q psy3337 98 NLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDL-MVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQI- 174 (297)
Q Consensus 98 ~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~-l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l- 174 (297)
.|+. ++...... .+. .....+..++|++..+. +++-...+.|..+++........+.........+++.+.+..|
T Consensus 54 ~I~~i~~~g~~~~-~~~-~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly 131 (349)
T 3v64_C 54 DIRQVLPHRSEYT-LLL-NNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLY 131 (349)
T ss_dssp CEEEECTTSCCEE-EEE-CSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEE
T ss_pred ceEEEeCCCCeeE-Eee-cCCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEE
Confidence 3544 65544433 333 33344689999986554 4555567889999987655433333333456789999855554
Q ss_pred EEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCCCceE
Q psy3337 175 VSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSGRLR 254 (297)
Q Consensus 175 ~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~~ 254 (297)
++-...+.|.+.++.... ...+.... . ..-..++++|.+..|+.+.. +. .+.|..+++......
T Consensus 132 ~~d~~~~~I~~~~~dG~~-~~~l~~~~-l--------~~P~~iavdp~~g~ly~td~-----~~-~~~I~r~~~dG~~~~ 195 (349)
T 3v64_C 132 WTDSGTSRIEVANLDGAH-RKVLLWQS-L--------EKPRAIALHPMEGTIYWTDW-----GN-TPRIEASSMDGSGRR 195 (349)
T ss_dssp EEETTTTEEEEEETTSCS-CEEEECTT-C--------SCEEEEEEETTTTEEEEEEC-----SS-SCEEEEEETTSCSCE
T ss_pred EEcCCCCeEEEEcCCCCc-eEEEEeCC-C--------CCcceEEEecCcCeEEEecc-----CC-CCEEEEEeCCCCCcE
Confidence 454556789999986432 22221111 0 01124777887666666543 11 378999988753333
Q ss_pred EEecc-CCCeEEEEEcCCCCEEEEEecCCCeEEEEEeCC
Q psy3337 255 LAREM-KESLSALAVRDDGRFVAVGTMFTGSVFVYIAFS 292 (297)
Q Consensus 255 ~~~~~-~~~v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~ 292 (297)
..+.. -.....++|+|++..|..+....+.|..+|+..
T Consensus 196 ~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG 234 (349)
T 3v64_C 196 IIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDG 234 (349)
T ss_dssp ESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred EEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCC
Confidence 22222 223889999998777776665377899998754
No 261
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.13 E-value=0.0013 Score=54.91 Aligned_cols=175 Identities=13% Similarity=0.218 Sum_probs=109.5
Q ss_pred CceEEE-EeeCCCeEEEEecCCCCcEEEEEEecC----CC---E-EEEEcC--CCcEEEEeC--CCCeeeEEecc-----
Q psy3337 96 EKNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRN----GD---L-MVTGGT--DGHLRLWSF--PKMKPLLHIEA----- 157 (297)
Q Consensus 96 d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~----g~---~-l~s~~~--d~~i~iwd~--~~~~~~~~~~~----- 157 (297)
.+-+.+ |+ +|+.++.+. . +.++.+.+-|+ |+ + +++.-. +++|.+|++ .++ .+..+..
T Consensus 49 ~~gL~Vydl-~G~~l~~~~-~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~-~l~~i~~~~~pv 123 (355)
T 3amr_A 49 KSGLVVYSL-DGKMLHSYN-T--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNG-TLQSMTDPDHPI 123 (355)
T ss_dssp TTEEEEEET-TSCEEEEEC-C--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTC-CEEECSCTTSCE
T ss_pred CCCEEEEcC-CCcEEEEcc-C--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCC-ceeeccccccCc
Confidence 345777 88 888888875 2 45667766663 32 2 333334 578999976 333 3444421
Q ss_pred -cc-CCeeEEEE--ccC-CC-EEEEEeCCCcEEEEEcC---CC----ceeeeeeccCCCCceEEEEeeeeeeeeeCCCCe
Q psy3337 158 -HS-KEIDDVDF--SIS-GE-QIVSIAKDGKAFVWNSK---NG----SLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRS 224 (297)
Q Consensus 158 -~~-~~v~~~~~--sp~-~~-~l~s~~~d~~v~lwd~~---~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 224 (297)
.. ..+..+++ +|. +. ++++...+|.+..|++. .+ +.++++.... ....+...+...
T Consensus 124 ~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgs-----------q~EgcvvDd~~g 192 (355)
T 3amr_A 124 ATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNS-----------QTEGMAADDEYG 192 (355)
T ss_dssp ECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSS-----------CEEEEEEETTTT
T ss_pred CCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCC-----------CcceEEEcCCCC
Confidence 11 56777888 774 43 67778888999999883 22 3455554322 122244567777
Q ss_pred EEEEeccCcccccCCCCeEEEEeCC-----CCceEEEeccC---CCeEEEEE--cCCCC-EEEEEecCCCeEEEEEeC-C
Q psy3337 225 RLFTLANPLAQNKRGISYVQQWDVD-----SGRLRLAREMK---ESLSALAV--RDDGR-FVAVGTMFTGSVFVYIAF-S 292 (297)
Q Consensus 225 ~l~~~~~~~~~~g~~d~~i~~wd~~-----~~~~~~~~~~~---~~v~~~~~--s~dg~-~l~~~~~~dg~i~vwd~~-~ 292 (297)
.|+... ++..|+.++.. +++.+..+... ..+..|++ .++|+ +|++++..+.++.+||.. +
T Consensus 193 ~Lyv~e--------Ed~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~ 264 (355)
T 3amr_A 193 RLYIAE--------EDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGK 264 (355)
T ss_dssp EEEEEE--------TTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTT
T ss_pred eEEEec--------ccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCC
Confidence 777744 47778888865 34566555332 23888888 45666 777777547899999986 4
Q ss_pred ce
Q psy3337 293 LQ 294 (297)
Q Consensus 293 ~~ 294 (297)
.+
T Consensus 265 ~~ 266 (355)
T 3amr_A 265 NK 266 (355)
T ss_dssp CC
T ss_pred Cc
Confidence 43
No 262
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.12 E-value=0.0019 Score=53.12 Aligned_cols=154 Identities=13% Similarity=0.088 Sum_probs=93.5
Q ss_pred CcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCeeeEEeccccCCeeEEEEccCCCEEEEEeCC--CcEEEEEcCCCceee
Q psy3337 118 SLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAKD--GKAFVWNSKNGSLSK 195 (297)
Q Consensus 118 ~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~d--~~v~lwd~~~~~~~~ 195 (297)
.....++|+++|+++++-..++.|..||.... ....+. ....+..+++.++++++++.... ..|..+|..+++...
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~ 109 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVET 109 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEE
Confidence 45679999999997778778899999997653 333332 23468899999999966655432 247777877776533
Q ss_pred eeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCCCce-EEEe-------c--cC-CCeE
Q psy3337 196 ELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSGRL-RLAR-------E--MK-ESLS 264 (297)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~-~~~~-------~--~~-~~v~ 264 (297)
.... +.. .+. ..++..+++..+++- ...+.|+++|...++. +... . .. ....
T Consensus 110 ~~~~--~~~-~~~------~g~~~~~~~~~~v~d--------~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pn 172 (306)
T 2p4o_A 110 LLTL--PDA-IFL------NGITPLSDTQYLTAD--------SYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAAN 172 (306)
T ss_dssp EEEC--TTC-SCE------EEEEESSSSEEEEEE--------TTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEE
T ss_pred EEeC--CCc-ccc------CcccccCCCcEEEEE--------CCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCC
Confidence 2221 111 111 112334455434332 2367899999876431 2111 0 11 1245
Q ss_pred EEEEcCCCCEEEEEecCCCeEEEEEeCC
Q psy3337 265 ALAVRDDGRFVAVGTMFTGSVFVYIAFS 292 (297)
Q Consensus 265 ~~~~s~dg~~l~~~~~~dg~i~vwd~~~ 292 (297)
.+ +|++++|+++....+.|.+|++..
T Consensus 173 gi--s~dg~~lyv~d~~~~~I~~~~~~~ 198 (306)
T 2p4o_A 173 GL--KRFGNFLYVSNTEKMLLLRIPVDS 198 (306)
T ss_dssp EE--EEETTEEEEEETTTTEEEEEEBCT
T ss_pred Cc--CcCCCEEEEEeCCCCEEEEEEeCC
Confidence 55 888887766665378999999864
No 263
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.12 E-value=0.0024 Score=54.79 Aligned_cols=178 Identities=5% Similarity=-0.095 Sum_probs=107.3
Q ss_pred ceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCEE-EEEcCCCcEEEEeCCCC----eeeEEeccccCCeeEEEEccC
Q psy3337 97 KNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDLM-VTGGTDGHLRLWSFPKM----KPLLHIEAHSKEIDDVDFSIS 170 (297)
Q Consensus 97 ~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l-~s~~~d~~i~iwd~~~~----~~~~~~~~~~~~v~~~~~sp~ 170 (297)
..|+. ++........+ .....+..++|++....| ++-...+.|+.+++... .....+.........+++.+.
T Consensus 92 ~~I~~i~l~~~~~~~~~--~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~ 169 (400)
T 3p5b_L 92 HEVRKMTLDRSEYTSLI--PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI 169 (400)
T ss_dssp TEEEEECTTSCSCEEEE--CSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETT
T ss_pred ceeEEEccCCcceeEec--cccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEec
Confidence 45555 66655544433 344567899999865544 55556788988988652 223333334456788999884
Q ss_pred CCEE-EEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCC
Q psy3337 171 GEQI-VSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVD 249 (297)
Q Consensus 171 ~~~l-~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~ 249 (297)
+..| ++-...+.|.+.++........+. ... ..-..++++|.+..|+.+.. + ..+.|...++.
T Consensus 170 ~~~lY~~d~~~~~I~~~~~~g~~~~~l~~-~~~---------~~P~~iavdp~~g~ly~td~-----~-~~~~I~~~~~d 233 (400)
T 3p5b_L 170 HSNIYWTDSVLGTVSVADTKGVKRKTLFR-ENG---------SKPRAIVVDPVHGFMYWTDW-----G-TPAKIKKGGLN 233 (400)
T ss_dssp TTEEEEEETTTTEEEEECTTTCSEEEEEE-CSS---------CCEEEEEEETTTTEEEEEEC-----S-SSCCEEEEETT
T ss_pred CCceEEEECCCCeEEEEeCCCCceEEEEe-CCC---------CCcceEEEecccCeEEEEeC-----C-CCCEEEEEeCC
Confidence 4444 444567788888886443222221 110 01123677887666666543 2 23689999887
Q ss_pred CCceEEEeccC-CCeEEEEEcCCCCEEEEEecCCCeEEEEEeCC
Q psy3337 250 SGRLRLAREMK-ESLSALAVRDDGRFVAVGTMFTGSVFVYIAFS 292 (297)
Q Consensus 250 ~~~~~~~~~~~-~~v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~ 292 (297)
.......+... .....|++++++..|..+....+.|..+|+..
T Consensus 234 G~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG 277 (400)
T 3p5b_L 234 GVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 277 (400)
T ss_dssp SCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCC
Confidence 54333333332 34899999998888777765367899988754
No 264
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.11 E-value=0.001 Score=56.84 Aligned_cols=177 Identities=7% Similarity=-0.024 Sum_probs=106.0
Q ss_pred eEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCC-EEEEEcCCCcEEEEeCCCCeeeEEeccccCCeeEEEEccCCCEEE
Q psy3337 98 NLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGD-LMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIV 175 (297)
Q Consensus 98 ~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~-~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~ 175 (297)
.|+. ++........+ .....+..++|++.+. ++++-...+.|..+++........+.........+++.+.+..|+
T Consensus 97 ~I~~i~~~~~~~~~~~--~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY 174 (386)
T 3v65_B 97 DIRQVLPHRSEYTLLL--NNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLY 174 (386)
T ss_dssp CEEEECTTSCCCEEEE--CSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEE
T ss_pred cceeeccCCCcEEEEe--cCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEE
Confidence 4554 66555443333 3334467999998554 555656678899999876554333333334567899988555554
Q ss_pred -EEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCCCceE
Q psy3337 176 -SIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSGRLR 254 (297)
Q Consensus 176 -s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~~ 254 (297)
+-...+.|.+.++.... ...+.... . ..-..++++|.+..|+.+.. +. .+.|..+++......
T Consensus 175 ~~d~~~~~I~~~~~dg~~-~~~l~~~~-l--------~~P~giavdp~~g~ly~td~-----~~-~~~I~r~~~dG~~~~ 238 (386)
T 3v65_B 175 WTDSGTSRIEVANLDGAH-RKVLLWQS-L--------EKPRAIALHPMEGTIYWTDW-----GN-TPRIEASSMDGSGRR 238 (386)
T ss_dssp EEETTTTEEEECBTTSCS-CEEEECSS-C--------SCEEEEEEETTTTEEEEEEC-----SS-SCEEEEEETTSCSCE
T ss_pred EEcCCCCeEEEEeCCCCc-eEEeecCC-C--------CCCcEEEEEcCCCeEEEecc-----CC-CCEEEEEeCCCCCcE
Confidence 44456788888875332 22221111 0 01124677887776766543 11 378999998754333
Q ss_pred EEeccC-CCeEEEEEcCCCCEEEEEecCCCeEEEEEeCC
Q psy3337 255 LAREMK-ESLSALAVRDDGRFVAVGTMFTGSVFVYIAFS 292 (297)
Q Consensus 255 ~~~~~~-~~v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~ 292 (297)
...... .....|+|+|++..|..+....+.|..+|+..
T Consensus 239 ~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG 277 (386)
T 3v65_B 239 IIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDG 277 (386)
T ss_dssp EEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTS
T ss_pred EEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCC
Confidence 333222 23789999987777766665377899888753
No 265
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.10 E-value=0.0006 Score=61.54 Aligned_cols=160 Identities=13% Similarity=0.076 Sum_probs=100.4
Q ss_pred ceEEE-EeeCCCeEEEEec-CCC--------CcEEEEEEe-cCCC---EEEEEcCCCcEEEEeCCCCeeeEEecccc---
Q psy3337 97 KNLRF-GFKTFDSVQTVFA-GSE--------SLQRVVRLS-RNGD---LMVTGGTDGHLRLWSFPKMKPLLHIEAHS--- 159 (297)
Q Consensus 97 ~~i~~-~~~~~~~~~~~~~-~h~--------~~v~~~~~s-~~g~---~l~s~~~d~~i~iwd~~~~~~~~~~~~~~--- 159 (297)
+.|.- |..+|+.+-.+.. .|. .++. +... .+|+ .++.++.+|.++++|..+++.+..+....
T Consensus 291 ~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~ 369 (582)
T 1flg_A 291 SGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNIT 369 (582)
T ss_dssp SEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCC
T ss_pred ceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCcc
Confidence 45665 9999998887762 232 1221 2222 4674 78889999999999999999876554321
Q ss_pred ----------CC--------------------------------eeEEEEccCCCEEEEEe-------------------
Q psy3337 160 ----------KE--------------------------------IDDVDFSISGEQIVSIA------------------- 178 (297)
Q Consensus 160 ----------~~--------------------------------v~~~~~sp~~~~l~s~~------------------- 178 (297)
.+ -..++++|+..++++..
T Consensus 370 ~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~ 449 (582)
T 1flg_A 370 WASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSA 449 (582)
T ss_dssp SEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSC
T ss_pred ccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCc
Confidence 00 01346677655555432
Q ss_pred --------------CCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEE
Q psy3337 179 --------------KDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQ 244 (297)
Q Consensus 179 --------------~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~ 244 (297)
.++.|..||+.+++.+-......+..... + ...+..++. |+.|+.|+
T Consensus 450 ~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~---------~--~tagglvf~--------g~~dg~l~ 510 (582)
T 1flg_A 450 YLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHLPLWAGV---------L--ATAGNLVFT--------GTGDGYFK 510 (582)
T ss_dssp CCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESSCCCSCC---------E--EETTTEEEE--------ECTTSEEE
T ss_pred eeccceeecCCCCCCcceEEEEECCCCCEEEEecCCCCCcccc---------e--EeCCCEEEE--------ECCCCcEE
Confidence 25778889988888776655332211000 0 112334444 55699999
Q ss_pred EEeCCCCceEEEeccCCCeE--EEEEcCCCCEEE
Q psy3337 245 QWDVDSGRLRLAREMKESLS--ALAVRDDGRFVA 276 (297)
Q Consensus 245 ~wd~~~~~~~~~~~~~~~v~--~~~~s~dg~~l~ 276 (297)
.||.++|+.+-.+.....+. -+.+..+|+..+
T Consensus 511 A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~qYv 544 (582)
T 1flg_A 511 AFDAKSGKELWKFQTGSGIVSPPITWEQDGEQYL 544 (582)
T ss_dssp EEETTTCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred EEECCCCCEEEEecCCCCcccCceEEEECCEEEE
Confidence 99999999998887765533 366777887433
No 266
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.08 E-value=7.2e-05 Score=69.77 Aligned_cols=180 Identities=10% Similarity=0.083 Sum_probs=97.2
Q ss_pred CCCCceEEE-EeeCC-CeEEEEecCCCCcEEEEEEecCCCEEEEEcCC-----CcEEEEeCCCCee--eEEec-cccCCe
Q psy3337 93 DSKEKNLRF-GFKTF-DSVQTVFAGSESLQRVVRLSRNGDLMVTGGTD-----GHLRLWSFPKMKP--LLHIE-AHSKEI 162 (297)
Q Consensus 93 ~~~d~~i~~-~~~~~-~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d-----~~i~iwd~~~~~~--~~~~~-~~~~~v 162 (297)
++...+|++ ++.++ +.+.... ......++|+|||+.|+....| ..|+++++.++.. ...+. .+....
T Consensus 197 G~~~~~l~v~dl~~g~~~l~~~~---~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~ 273 (751)
T 2xe4_A 197 GNEVYTIEFKRISDPSQTIADKV---SGTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFS 273 (751)
T ss_dssp SSSCEEEEEEETTCTTCCCCCCE---EEECSCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCE
T ss_pred CCceEEEEEEECCCCCEeCCccc---cCceeeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceE
Confidence 334456888 88887 6321111 1112468899999888876655 3588888876542 22332 223456
Q ss_pred eEEEEccCCCEEEEEeC---CCcEEEEEcCCCc-ee--eeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccc
Q psy3337 163 DDVDFSISGEQIVSIAK---DGKAFVWNSKNGS-LS--KELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQN 236 (297)
Q Consensus 163 ~~~~~sp~~~~l~s~~~---d~~v~lwd~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~ 236 (297)
..+.|+|||++|+..+. ...|+++|+.++. .. ..+.... .. ..+ .+.|+. +..|+..++. .
T Consensus 274 ~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~-~~--~~~------s~~~~~-g~~l~~~t~~---~ 340 (751)
T 2xe4_A 274 AFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPRE-KG--VRY------DVQMHG-TSHLVILTNE---G 340 (751)
T ss_dssp EEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCC-TT--CCE------EEEEET-TTEEEEEECT---T
T ss_pred EEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCC-CC--ceE------EEeeee-CCEEEEEeCC---C
Confidence 78899999998886653 3468888987652 12 2222111 11 001 122222 5555554440 0
Q ss_pred cCCCCeEEEEeCCCC-ceEE-EeccCCC--eEEEEEcCCCCEEEEEecCCCe--EEEEEe
Q psy3337 237 KRGISYVQQWDVDSG-RLRL-AREMKES--LSALAVRDDGRFVAVGTMFTGS--VFVYIA 290 (297)
Q Consensus 237 g~~d~~i~~wd~~~~-~~~~-~~~~~~~--v~~~~~s~dg~~l~~~~~~dg~--i~vwd~ 290 (297)
+.....|..+|+.++ +... .+..... +..+.+. .+.++++... ++. |.++++
T Consensus 341 ~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~-~~~lv~~~~~-~g~~~l~~~dl 398 (751)
T 2xe4_A 341 GAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVR-SNYLVVAGRR-AGLTRIWTMMA 398 (751)
T ss_dssp TCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEEC-SSEEEEEEEE-TTEEEEEEEEC
T ss_pred CCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEE-CCEEEEEEEe-CCEEEEEEEec
Confidence 123457888888752 2222 2333333 5556554 2344555565 775 455564
No 267
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.07 E-value=0.00061 Score=61.37 Aligned_cols=161 Identities=9% Similarity=-0.014 Sum_probs=101.2
Q ss_pred eEEE-EeeCCCeEEEEec-CCC--------CcEEEEEEecCCC---EEEEEcCCCcEEEEeCCCCeeeEEecccc-----
Q psy3337 98 NLRF-GFKTFDSVQTVFA-GSE--------SLQRVVRLSRNGD---LMVTGGTDGHLRLWSFPKMKPLLHIEAHS----- 159 (297)
Q Consensus 98 ~i~~-~~~~~~~~~~~~~-~h~--------~~v~~~~~s~~g~---~l~s~~~d~~i~iwd~~~~~~~~~~~~~~----- 159 (297)
.|.. |..+|+.+-.+.. .|. .++ -+...++|+ .++.++.+|.++++|..+++.+..+....
T Consensus 273 ~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~-l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~ 351 (571)
T 2ad6_A 273 TIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMV-LTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVF 351 (571)
T ss_dssp EEEEEETTTCCEEEEEESSTTCSSCCCCCCCCE-EEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSE
T ss_pred EEEEEecCCCcEEEEecCCCCcccccccCCCCE-EEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCcccc
Confidence 4555 9999998877762 221 222 223335774 57788899999999999998876654211
Q ss_pred --------CCe--------------------------eEEEEccCCCEEEEEe---------------------------
Q psy3337 160 --------KEI--------------------------DDVDFSISGEQIVSIA--------------------------- 178 (297)
Q Consensus 160 --------~~v--------------------------~~~~~sp~~~~l~s~~--------------------------- 178 (297)
.++ ..++++|+..+|+...
T Consensus 352 ~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~ 431 (571)
T 2ad6_A 352 KKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAM 431 (571)
T ss_dssp EEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEE
T ss_pred ccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCcccccccee
Confidence 111 2467888777776653
Q ss_pred ----------CCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeC
Q psy3337 179 ----------KDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDV 248 (297)
Q Consensus 179 ----------~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~ 248 (297)
.++.|..||+.+++.+.++....+... ......+..++. ++.|+.|+.||.
T Consensus 432 ~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~~~~~-----------~~~~t~gg~v~~--------g~~dg~l~a~D~ 492 (571)
T 2ad6_A 432 YPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFAAWG-----------GTLYTKGGLVWY--------ATLDGYLKALDN 492 (571)
T ss_dssp EECTTSTTSCCCEEEEEECTTTCCEEEEEEESSCCCS-----------BCEEETTTEEEE--------ECTTSEEEEEET
T ss_pred ccCccccCCCCCCeEEEEECCCCCEEEEecCCCCccc-----------eeEEECCCEEEE--------EcCCCeEEEEEC
Confidence 347788899888887766653321110 001112334554 455999999999
Q ss_pred CCCceEEEeccCCCe--EEEEEcCCCCEEEEE
Q psy3337 249 DSGRLRLAREMKESL--SALAVRDDGRFVAVG 278 (297)
Q Consensus 249 ~~~~~~~~~~~~~~v--~~~~~s~dg~~l~~~ 278 (297)
.+|+++..+.....+ ..+.+..+|+.++..
T Consensus 493 ~tG~~lw~~~~~~~~~~~p~~~~~~G~~yv~~ 524 (571)
T 2ad6_A 493 KDGKELWNFKMPSGGIGSPMTYSFKGKQYIGS 524 (571)
T ss_dssp TTCCEEEEEECSSCCCSCCEEEEETTEEEEEE
T ss_pred CCCCEEEEEeCCCCcEeeeEEEEECCEEEEEE
Confidence 999999888765442 234455777755443
No 268
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.05 E-value=0.0015 Score=55.80 Aligned_cols=156 Identities=6% Similarity=-0.073 Sum_probs=94.0
Q ss_pred EEEEEEecCC-CEEEEEcCCCcEEEEeCCCCeeeEEeccccCCeeEEEEccCCCEEEEEeC-C-CcEEEEEcCCCceeee
Q psy3337 120 QRVVRLSRNG-DLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAK-D-GKAFVWNSKNGSLSKE 196 (297)
Q Consensus 120 v~~~~~s~~g-~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~-d-~~v~lwd~~~~~~~~~ 196 (297)
...+++.+.+ +++++-...+.|.+.++........+...-.....+++.|.+..|+.+.. . +.|..+++... ....
T Consensus 161 p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~-~~~~ 239 (386)
T 3v65_B 161 PGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGS-GRRI 239 (386)
T ss_dssp CCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-SCEE
T ss_pred ccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCC-CcEE
Confidence 3578888754 45556666778888887644333333333456789999997766665543 3 67888887532 2222
Q ss_pred eeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCCCceEEEeccC-CCeEEEEEcCCCCEE
Q psy3337 197 LKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSGRLRLAREMK-ESLSALAVRDDGRFV 275 (297)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~-~~v~~~~~s~dg~~l 275 (297)
+.... . . .-..|+++|++..|+.+.. ..+.|..+|+........+... .....+++ ..+..+
T Consensus 240 ~~~~~-~--~------~PnGlavd~~~~~lY~aD~-------~~~~I~~~d~dG~~~~~~~~~~~~~P~giav-~~~~ly 302 (386)
T 3v65_B 240 IADTH-L--F------WPNGLTIDYAGRRMYWVDA-------KHHVIERANLDGSHRKAVISQGLPHPFAITV-FEDSLY 302 (386)
T ss_dssp EECSS-C--S------CEEEEEEEGGGTEEEEEET-------TTTEEEEECTTSCSCEEEECSSCSSEEEEEE-ETTEEE
T ss_pred EEECC-C--C------CeeeEEEeCCCCEEEEEEC-------CCCEEEEEeCCCCeeEEEEECCCCCceEEEE-ECCEEE
Confidence 21110 0 0 1124788987777777643 3578999998754333333322 23788888 344444
Q ss_pred EEEecCCCeEEEEEeCCce
Q psy3337 276 AVGTMFTGSVFVYIAFSLQ 294 (297)
Q Consensus 276 ~~~~~~dg~i~vwd~~~~~ 294 (297)
++-.. .+.|..++..+++
T Consensus 303 ~td~~-~~~V~~~~~~~G~ 320 (386)
T 3v65_B 303 WTDWH-TKSINSANKFTGK 320 (386)
T ss_dssp EEETT-TTEEEEEETTTCC
T ss_pred EeeCC-CCeEEEEECCCCc
Confidence 44445 8889988865554
No 269
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.04 E-value=0.0023 Score=53.83 Aligned_cols=156 Identities=6% Similarity=-0.052 Sum_probs=94.0
Q ss_pred EEEEEEecCC-CEEEEEcCCCcEEEEeCCCCeeeEEeccccCCeeEEEEccCCCEEEEEe-CC-CcEEEEEcCCCceeee
Q psy3337 120 QRVVRLSRNG-DLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIA-KD-GKAFVWNSKNGSLSKE 196 (297)
Q Consensus 120 v~~~~~s~~g-~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~-~d-~~v~lwd~~~~~~~~~ 196 (297)
...+++.+.+ +++++-...+.|.+.++........+...-.....++++|.+..|+.+. .. +.|..+++... ....
T Consensus 118 p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~-~~~~ 196 (349)
T 3v64_C 118 PGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGS-GRRI 196 (349)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-SCEE
T ss_pred ccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCC-CcEE
Confidence 4578898754 5556666778899999865433333333345678999999666655554 34 67888887532 2222
Q ss_pred eeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCCCceEEEeccC-CCeEEEEEcCCCCEE
Q psy3337 197 LKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSGRLRLAREMK-ESLSALAVRDDGRFV 275 (297)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~-~~v~~~~~s~dg~~l 275 (297)
+.... + ..-..++++|++..|+.+.. ..+.|..+|+........+... .....+++. ++...
T Consensus 197 ~~~~~-----~----~~PnGla~d~~~~~lY~aD~-------~~~~I~~~~~dG~~~~~~~~~~~~~P~giav~-~~~ly 259 (349)
T 3v64_C 197 IADTH-----L----FWPNGLTIDYAGRRMYWVDA-------KHHVIERANLDGSHRKAVISQGLPHPFAITVF-EDSLY 259 (349)
T ss_dssp SCCSS-----C----SCEEEEEEETTTTEEEEEET-------TTTEEEEEETTSCSCEEEECSSCSSEEEEEEE-TTEEE
T ss_pred EEECC-----C----CCcceEEEeCCCCEEEEEEC-------CCCEEEEEeCCCCceEEEEeCCCCCceEEEEE-CCEEE
Confidence 21110 0 01124788987777777643 3578999998754333333322 237788883 44444
Q ss_pred EEEecCCCeEEEEEeCCce
Q psy3337 276 AVGTMFTGSVFVYIAFSLQ 294 (297)
Q Consensus 276 ~~~~~~dg~i~vwd~~~~~ 294 (297)
++-.. .+.|..++..+++
T Consensus 260 ~td~~-~~~V~~~~~~~G~ 277 (349)
T 3v64_C 260 WTDWH-TKSINSANKFTGK 277 (349)
T ss_dssp EEETT-TTEEEEEETTTCC
T ss_pred EecCC-CCeEEEEEccCCC
Confidence 44444 7888888865554
No 270
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.02 E-value=0.0015 Score=54.15 Aligned_cols=151 Identities=11% Similarity=0.023 Sum_probs=89.8
Q ss_pred cEEEEEEec-CCCEEEEEcCCCcEEEEeCCCCeeeEEecc-----ccCCeeEEEEcc-CCCEEEEEeC------------
Q psy3337 119 LQRVVRLSR-NGDLMVTGGTDGHLRLWSFPKMKPLLHIEA-----HSKEIDDVDFSI-SGEQIVSIAK------------ 179 (297)
Q Consensus 119 ~v~~~~~s~-~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~-----~~~~v~~~~~sp-~~~~l~s~~~------------ 179 (297)
.+..+++.+ +++ |+.+...+.|..+|..++.. ..+.. .......+++.| +|+++++-..
T Consensus 81 ~p~gi~~~~~~g~-l~v~d~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~ 158 (322)
T 2fp8_A 81 RTYDISYNLQNNQ-LYIVDCYYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIM 158 (322)
T ss_dssp CEEEEEEETTTTE-EEEEETTTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHH
T ss_pred CCceEEEcCCCCc-EEEEECCCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceeh
Confidence 467899998 665 44444445588888765542 22211 113468899999 9987776432
Q ss_pred -----CCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCCC---
Q psy3337 180 -----DGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSG--- 251 (297)
Q Consensus 180 -----d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~--- 251 (297)
++.|..||..+++.......- ..-..++++|++..|+.+.. ..+.|.+|++...
T Consensus 159 ~~~~~~g~v~~~d~~~~~~~~~~~~~-----------~~p~gia~~~dg~~lyv~d~-------~~~~I~~~~~~~~~~~ 220 (322)
T 2fp8_A 159 DTSDKTGRLIKYDPSTKETTLLLKEL-----------HVPGGAEVSADSSFVLVAEF-------LSHQIVKYWLEGPKKG 220 (322)
T ss_dssp HHTCCCEEEEEEETTTTEEEEEEEEE-----------SCCCEEEECTTSSEEEEEEG-------GGTEEEEEESSSTTTT
T ss_pred cccCCCceEEEEeCCCCEEEEeccCC-----------ccCcceEECCCCCEEEEEeC-------CCCeEEEEECCCCcCC
Confidence 367888887666532221110 01123788999987766532 2578999998742
Q ss_pred ceEEEeccCCCeEEEEEcCCCCEEEEEec---------CCCeEEEEEe
Q psy3337 252 RLRLAREMKESLSALAVRDDGRFVAVGTM---------FTGSVFVYIA 290 (297)
Q Consensus 252 ~~~~~~~~~~~v~~~~~s~dg~~l~~~~~---------~dg~i~vwd~ 290 (297)
.......... ...+++.++|++.++... ..+.|..+|.
T Consensus 221 ~~~~~~~~~g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~ 267 (322)
T 2fp8_A 221 TAEVLVKIPN-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDE 267 (322)
T ss_dssp CEEEEEECSS-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECT
T ss_pred ccceEEeCCC-CCCeEECCCCCEEEEecCcccccccCCCccEEEEECC
Confidence 2111111222 788999999986554431 0245777765
No 271
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.99 E-value=0.0016 Score=56.55 Aligned_cols=153 Identities=13% Similarity=0.130 Sum_probs=89.6
Q ss_pred EEEEEEecC--CCEEEEEcCCCcEEEEeCCCCeeeEEeccccCCeeEEEEccCCCEEEEEeCC---C-cEEEEEcCCCce
Q psy3337 120 QRVVRLSRN--GDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAKD---G-KAFVWNSKNGSL 193 (297)
Q Consensus 120 v~~~~~s~~--g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~d---~-~v~lwd~~~~~~ 193 (297)
...++|+|+ ...|+.+...+.|+.+|+.++...... ........++|+++++++++.... . .+...+...+..
T Consensus 141 P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~-~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~~ 219 (433)
T 4hw6_A 141 IWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKT-TNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGFT 219 (433)
T ss_dssp CCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEEC-CCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTTC
T ss_pred CceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEee-cCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCee
Confidence 458999995 344555544489999998777654433 344568899999999944443321 1 133333221110
Q ss_pred e-eeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCCCceEEEe-cc--CCCeEEEEEc
Q psy3337 194 S-KELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSGRLRLAR-EM--KESLSALAVR 269 (297)
Q Consensus 194 ~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~-~~--~~~v~~~~~s 269 (297)
. ..+. .......++++|+...|+.+.. ..+.|+.+|..++.....+ .. ......++|+
T Consensus 220 ~~~~~~-----------~~~~P~giavd~~~G~lyv~d~-------~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~d 281 (433)
T 4hw6_A 220 ERLSLC-----------NARGAKTCAVHPQNGKIYYTRY-------HHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWH 281 (433)
T ss_dssp CEEEEE-----------ECSSBCCCEECTTTCCEEECBT-------TCSEEEEECTTTCCEEEEEEECSCCSSCEEEEEC
T ss_pred cccccc-----------ccCCCCEEEEeCCCCeEEEEEC-------CCCEEEEEECCCCeEEEEEeccCCCCCcccEEEe
Confidence 0 0000 0111223778884334544322 3678999999877663222 22 1224579999
Q ss_pred CCCCEEEEEecCCCeEEEEEeC
Q psy3337 270 DDGRFVAVGTMFTGSVFVYIAF 291 (297)
Q Consensus 270 ~dg~~l~~~~~~dg~i~vwd~~ 291 (297)
|+|++|+.+....+.|+.+++.
T Consensus 282 pdG~~LYvad~~~~~I~~~~~d 303 (433)
T 4hw6_A 282 PTGDWAYIIYNGKHCIYRVDYN 303 (433)
T ss_dssp TTSSEEEEEETTTTEEEEEEBC
T ss_pred CCCCEEEEEeCCCCEEEEEeCC
Confidence 9999766665437889998864
No 272
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.98 E-value=0.00095 Score=53.38 Aligned_cols=165 Identities=10% Similarity=0.073 Sum_probs=102.2
Q ss_pred CCCCcEEEEEEecCCCEEE-EEcCCCcEEEEeCCCCeeeEEecc-ccCCeeEEEEccCCCEEEEEeCCCcEEEEEcCCCc
Q psy3337 115 GSESLQRVVRLSRNGDLMV-TGGTDGHLRLWSFPKMKPLLHIEA-HSKEIDDVDFSISGEQIVSIAKDGKAFVWNSKNGS 192 (297)
Q Consensus 115 ~h~~~v~~~~~s~~g~~l~-s~~~d~~i~iwd~~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~s~~~d~~v~lwd~~~~~ 192 (297)
+-...+..++|+|+++.|+ +...++.|...|.. ++.++.+.- -....-.|++.+++.++++.-.++.+.++++....
T Consensus 24 g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~ 102 (255)
T 3qqz_A 24 GITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNS 102 (255)
T ss_dssp TCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECTTC
T ss_pred CcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCC
Confidence 6556799999999876554 57778899999987 777776642 12457889999998877776677889999886543
Q ss_pred ee---eeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCC-CCceEEEecc-------C-
Q psy3337 193 LS---KELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVD-SGRLRLAREM-------K- 260 (297)
Q Consensus 193 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~-~~~~~~~~~~-------~- 260 (297)
.+ ......... ......+..++++|++..|+++.. .....|+.|+-. ....+..+.. .
T Consensus 103 ~i~~~~~~~~~~~~----~~~N~g~EGLA~d~~~~~L~va~E------~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~ 172 (255)
T 3qqz_A 103 EVKILKKIKIPLQE----SPTNCGFEGLAYSRQDHTFWFFKE------KNPIEVYKVNGLLSSNELHISKDKALQRQFTL 172 (255)
T ss_dssp CEEEEEEEECCCSS----CCCSSCCEEEEEETTTTEEEEEEE------SSSEEEEEEESTTCSSCCEEEECHHHHHTCCS
T ss_pred eeeeeeeecccccc----ccccCCcceEEEeCCCCEEEEEEC------cCCceEEEEcccccCCceeeecchhhcccccc
Confidence 22 222111000 001122456899999988888654 112256666511 1111222211 1
Q ss_pred CCeEEEEEcCCC-CEEEEEecCCCeEEEEEeC
Q psy3337 261 ESLSALAVRDDG-RFVAVGTMFTGSVFVYIAF 291 (297)
Q Consensus 261 ~~v~~~~~s~dg-~~l~~~~~~dg~i~vwd~~ 291 (297)
..+.+++++|.. ++++.... ...|.++|..
T Consensus 173 ~d~S~l~~dp~tg~lliLS~~-s~~L~~~d~~ 203 (255)
T 3qqz_A 173 DDVSGAEFNQQKNTLLVLSHE-SRALQEVTLV 203 (255)
T ss_dssp SCCCEEEEETTTTEEEEEETT-TTEEEEECTT
T ss_pred CCceeEEEcCCCCeEEEEECC-CCeEEEEcCC
Confidence 127899999954 45555555 7778888754
No 273
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.96 E-value=0.00083 Score=60.73 Aligned_cols=198 Identities=10% Similarity=0.101 Sum_probs=114.8
Q ss_pred CceEEE-Ee-eCCCeEEEEecCCCC----------cEEEEEEecCCCE----EEEEcCCCcEEEEeCCCCeeeEEecccc
Q psy3337 96 EKNLRF-GF-KTFDSVQTVFAGSES----------LQRVVRLSRNGDL----MVTGGTDGHLRLWSFPKMKPLLHIEAHS 159 (297)
Q Consensus 96 d~~i~~-~~-~~~~~~~~~~~~h~~----------~v~~~~~s~~g~~----l~s~~~d~~i~iwd~~~~~~~~~~~~~~ 159 (297)
++.|.- |. .+|+.+-.+...... ....++++|.+.. ++.++.|+.|..+|..+|+.+.......
T Consensus 72 ~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG~~~W~~~~~~ 151 (599)
T 1w6s_A 72 PNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETGETVWKVENSD 151 (599)
T ss_dssp TTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTCCEEEEEECCC
T ss_pred CCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCCCEEEeecCCC
Confidence 555555 98 899988776522110 0123556554444 8888899999999999999887654322
Q ss_pred ----CCee-EEEEccCCCEEEEEe------CCCcEEEEEcCCCceeeeeeccCCCCc-----------------------
Q psy3337 160 ----KEID-DVDFSISGEQIVSIA------KDGKAFVWNSKNGSLSKELKWNTPDNI----------------------- 205 (297)
Q Consensus 160 ----~~v~-~~~~sp~~~~l~s~~------~d~~v~lwd~~~~~~~~~~~~~~~~~~----------------------- 205 (297)
..+. ...+. ++ .++.++ .++.|+.+|..+|+.+-.+....+...
T Consensus 152 ~~~~~~~~ssP~v~-~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~t 229 (599)
T 1w6s_A 152 IKVGSTLTIAPYVV-KD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGT 229 (599)
T ss_dssp GGGTCBCCSCCEEE-TT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHT
T ss_pred CCccceeecCCEEE-CC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCcccccccccccccccccccccccccc
Confidence 0121 11111 44 455444 379999999999998877654322100
Q ss_pred ----eEEE-EeeeeeeeeeCCCCeEEEEeccC------cccccC--CCCeEEEEeCCCCceEEEeccCC----------C
Q psy3337 206 ----KYLF-KRCRYGLVEDSPKRSRLFTLANP------LAQNKR--GISYVQQWDVDSGRLRLAREMKE----------S 262 (297)
Q Consensus 206 ----~~~~-~~~~~~~~~~s~~~~~l~~~~~~------~~~~g~--~d~~i~~wd~~~~~~~~~~~~~~----------~ 262 (297)
.+.. ....+..+++.++...++..... ....+. ....|..+|..+|+.+-.++... .
T Consensus 230 w~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~ 309 (599)
T 1w6s_A 230 WEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNV 309 (599)
T ss_dssp SSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCC
T ss_pred CCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCc
Confidence 0000 00001123445565556654320 000000 02489999999999887765421 1
Q ss_pred eEEEEEc-CCC---CEEEEEecCCCeEEEEEeCCceec
Q psy3337 263 LSALAVR-DDG---RFVAVGTMFTGSVFVYIAFSLQMC 296 (297)
Q Consensus 263 v~~~~~s-~dg---~~l~~~~~~dg~i~vwd~~~~~~~ 296 (297)
..-+... .+| ..++.++. +|.++++|..+|+.+
T Consensus 310 p~l~d~~~~~G~~~~~v~~~~~-~G~l~~lD~~tG~~l 346 (599)
T 1w6s_A 310 MMLSEQKDKDGKARKLLTHPDR-NGIVYTLDRTDGALV 346 (599)
T ss_dssp CEEEEEECTTSCEEEEEEEECT-TSEEEEEETTTCCEE
T ss_pred cEEEeccccCCcEEEEEEEECC-CcEEEEEECCCCCEe
Confidence 1112222 567 46777888 999999999999865
No 274
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.96 E-value=0.0054 Score=50.72 Aligned_cols=158 Identities=10% Similarity=-0.024 Sum_probs=95.9
Q ss_pred cEEEEEEecCC-CEEEEEcCCCcEEEEeCCCCeeeEEeccccCCeeEEEEccCCCEEEEEeCC--CcEEEEEcCCCceee
Q psy3337 119 LQRVVRLSRNG-DLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAKD--GKAFVWNSKNGSLSK 195 (297)
Q Consensus 119 ~v~~~~~s~~g-~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~d--~~v~lwd~~~~~~~~ 195 (297)
....+++.+.+ ++.++-...+.|.++++........+.........+++.|.+..|+.+... +.|..+++. |....
T Consensus 78 ~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~d-G~~~~ 156 (316)
T 1ijq_A 78 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN-GVDIY 156 (316)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT-SCCEE
T ss_pred CcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCC-CCCeE
Confidence 34688998754 455566678899999986543332333334567899999976666655543 678888874 33333
Q ss_pred eeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCCCceEEEecc---CCCeEEEEEcCCC
Q psy3337 196 ELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSGRLRLAREM---KESLSALAVRDDG 272 (297)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~---~~~v~~~~~s~dg 272 (297)
.+.... . ..-..++++|++..|+.+.. ..+.|..+|+........... ......+++. .+
T Consensus 157 ~~~~~~-~--------~~P~gla~d~~~~~lY~~D~-------~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~-~~ 219 (316)
T 1ijq_A 157 SLVTEN-I--------QWPNGITLDLLSGRLYWVDS-------KLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-ED 219 (316)
T ss_dssp EEECSS-C--------SCEEEEEEETTTTEEEEEET-------TTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE-TT
T ss_pred EEEECC-C--------CCceEEEEeccCCEEEEEEC-------CCCeEEEEecCCCceEEEeecCCccCCcEEEEEE-CC
Confidence 221110 0 01124788988877777643 357899999975332222222 1236788885 34
Q ss_pred CEEEEEecCCCeEEEEEeCCcee
Q psy3337 273 RFVAVGTMFTGSVFVYIAFSLQM 295 (297)
Q Consensus 273 ~~l~~~~~~dg~i~vwd~~~~~~ 295 (297)
..+++-.. .+.|..++..+++.
T Consensus 220 ~ly~~d~~-~~~V~~~~~~~g~~ 241 (316)
T 1ijq_A 220 KVFWTDII-NEAIFSANRLTGSD 241 (316)
T ss_dssp EEEEEETT-TTEEEEEETTTCCC
T ss_pred EEEEEECC-CCeEEEEeCCCCcc
Confidence 44444444 78999999776653
No 275
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.92 E-value=0.0018 Score=56.80 Aligned_cols=153 Identities=8% Similarity=0.081 Sum_probs=92.9
Q ss_pred EEEEEEecC-C-CEEEEEcCCCcEEEEeCCCCeeeEEeccc---cCCeeEEEE-------ccCCCEEEEEeCCC------
Q psy3337 120 QRVVRLSRN-G-DLMVTGGTDGHLRLWSFPKMKPLLHIEAH---SKEIDDVDF-------SISGEQIVSIAKDG------ 181 (297)
Q Consensus 120 v~~~~~s~~-g-~~l~s~~~d~~i~iwd~~~~~~~~~~~~~---~~~v~~~~~-------sp~~~~l~s~~~d~------ 181 (297)
...++|+|. . +++++-...+.|++.|+.++.....+... ......++| ++++..|+.+...+
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~ 220 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDES 220 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGE
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccC
Confidence 568999983 4 44444444567899998877654433321 235889999 99999676665543
Q ss_pred -cEEEEEcCC-Ccee-----eeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCC-----
Q psy3337 182 -KAFVWNSKN-GSLS-----KELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVD----- 249 (297)
Q Consensus 182 -~v~lwd~~~-~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~----- 249 (297)
.|.+++... +... ..+. ....-..++.+|++..|+.+.. ..+.|..+|+.
T Consensus 221 ~~V~~i~r~~~G~~~~~~~~~~v~-----------~~~~p~giavdp~~g~LYvtd~-------~~g~V~r~d~~~~~~~ 282 (496)
T 3kya_A 221 PSVYIIKRNADGTFDDRSDIQLIA-----------AYKQCNGATIHPINGELYFNSY-------EKGQVFRLDLVDYFKT 282 (496)
T ss_dssp EEEEEEECCTTSCCSTTSCEEEEE-----------EESCCCCEEECTTTCCEEEEET-------TTTEEEEECHHHHHHH
T ss_pred ceEEEEecCCCCceeecccceeec-----------cCCCceEEEEcCCCCeEEEEEC-------CCCEEEEEeccccccc
Confidence 266666433 2221 1111 0011123677996666665433 36789999987
Q ss_pred --CCce--------------EEEeccCCCeEEEEEcCCCCEEEEEecCCCeEEEEEe
Q psy3337 250 --SGRL--------------RLAREMKESLSALAVRDDGRFVAVGTMFTGSVFVYIA 290 (297)
Q Consensus 250 --~~~~--------------~~~~~~~~~v~~~~~s~dg~~l~~~~~~dg~i~vwd~ 290 (297)
++.. +.........+.++|+|+|++|..+......|+.++.
T Consensus 283 ~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~ 339 (496)
T 3kya_A 283 IKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDY 339 (496)
T ss_dssp HHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred ccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEec
Confidence 4443 2222222337899999999976655542778888665
No 276
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.90 E-value=0.0089 Score=51.22 Aligned_cols=159 Identities=9% Similarity=-0.017 Sum_probs=97.2
Q ss_pred CcEEEEEEec-CCCEEEEEcCCCcEEEEeCCCCeeeEEeccccCCeeEEEEccCCCEEEEEeC--CCcEEEEEcCCCcee
Q psy3337 118 SLQRVVRLSR-NGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAK--DGKAFVWNSKNGSLS 194 (297)
Q Consensus 118 ~~v~~~~~s~-~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~--d~~v~lwd~~~~~~~ 194 (297)
.....+++.+ .+++.++-...+.|.+.++........+...-.....|++.|.+.+|+.+.. .+.|...++... ..
T Consensus 159 ~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~-~~ 237 (400)
T 3p5b_L 159 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV-DI 237 (400)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSC-SC
T ss_pred CCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCC-cc
Confidence 3456888988 4555566667788999998755443334334445789999997666666553 367888887533 22
Q ss_pred eeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCCCceEEEeccC---CCeEEEEEcCC
Q psy3337 195 KELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSGRLRLAREMK---ESLSALAVRDD 271 (297)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~---~~v~~~~~s~d 271 (297)
..+.... + ..-..|++++++..|+.+.. ....|..+|+............ ....++++. .
T Consensus 238 ~~~~~~~-----l----~~P~glavd~~~~~lY~aD~-------~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~ 300 (400)
T 3p5b_L 238 YSLVTEN-----I----QWPNGITLDLLSGRLYWVDS-------KLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-E 300 (400)
T ss_dssp EEEECSS-----C----SCEEEEEEETTTTEEEEEET-------TTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE-T
T ss_pred EEEEECC-----C----CceEEEEEEeCCCEEEEEEC-------CCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe-C
Confidence 2221110 0 01123788988887877643 3578999998754433333321 226677773 3
Q ss_pred CCEEEEEecCCCeEEEEEeCCcee
Q psy3337 272 GRFVAVGTMFTGSVFVYIAFSLQM 295 (297)
Q Consensus 272 g~~l~~~~~~dg~i~vwd~~~~~~ 295 (297)
+..+++-.. .+.|..+|..+++.
T Consensus 301 ~~lywtd~~-~~~V~~~~~~~G~~ 323 (400)
T 3p5b_L 301 DKVFWTDII-NEAIFSANRLTGSD 323 (400)
T ss_dssp TEEEEEESS-SCSEEEEESSSCCC
T ss_pred CEEEEecCC-CCeEEEEEcCCCCc
Confidence 344444444 78899998777653
No 277
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.89 E-value=0.0064 Score=50.37 Aligned_cols=157 Identities=8% Similarity=-0.056 Sum_probs=95.3
Q ss_pred EEEEEEecC-CCEEEEEcCCCcEEEEeCCCCeeeEEeccccCCeeEEEEccCCCEEEEEeC--CCcEEEEEcCCCceeee
Q psy3337 120 QRVVRLSRN-GDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAK--DGKAFVWNSKNGSLSKE 196 (297)
Q Consensus 120 v~~~~~s~~-g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~--d~~v~lwd~~~~~~~~~ 196 (297)
...+++.+. ++++++-...+.|.++++........+.........+++.|.+..|+.+.. .+.|...++. |.....
T Consensus 81 p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~d-G~~~~~ 159 (318)
T 3sov_A 81 PDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMD-GSSRFI 159 (318)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETT-SCSCEE
T ss_pred ccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcC-CCCeEE
Confidence 457888874 455566667788999997643322223334456789999997666666553 4678888875 322222
Q ss_pred eeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCCCceEEEeccC-CCeEEEEEcCCCCEE
Q psy3337 197 LKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSGRLRLAREMK-ESLSALAVRDDGRFV 275 (297)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~-~~v~~~~~s~dg~~l 275 (297)
+.... + ..-..++++|++..|+.+.. ..+.|..+|+............ .....+++.. +..+
T Consensus 160 ~~~~~-----l----~~Pnglavd~~~~~lY~aD~-------~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~-~~ly 222 (318)
T 3sov_A 160 IINSE-----I----YWPNGLTLDYEEQKLYWADA-------KLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFE-DILY 222 (318)
T ss_dssp EECSS-----C----SCEEEEEEETTTTEEEEEET-------TTTEEEEEETTSCSCEEEECSCCSCEEEEEEET-TEEE
T ss_pred EEECC-----C----CCccEEEEeccCCEEEEEEC-------CCCEEEEEcCCCCceEEEecCCCCCceEEEEeC-CEEE
Confidence 21110 0 01124788997777777543 3678999998753333333322 2377888853 3344
Q ss_pred EEEecCCCeEEEEEeCCcee
Q psy3337 276 AVGTMFTGSVFVYIAFSLQM 295 (297)
Q Consensus 276 ~~~~~~dg~i~vwd~~~~~~ 295 (297)
++-.. .+.|..++..+++.
T Consensus 223 wtd~~-~~~V~~~~~~~G~~ 241 (318)
T 3sov_A 223 WTDWS-THSILACNKYTGEG 241 (318)
T ss_dssp EEETT-TTEEEEEETTTCCS
T ss_pred EEecC-CCeEEEEECCCCCc
Confidence 44444 78999999877654
No 278
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.84 E-value=0.0047 Score=51.19 Aligned_cols=179 Identities=11% Similarity=0.046 Sum_probs=104.4
Q ss_pred ceEEE-EeeCCC-eEEEEecCCCCcEEEEEEecC-CCEEEEEcCCCcEEEEeCCCCee-eEEeccccCCeeEEEEccCCC
Q psy3337 97 KNLRF-GFKTFD-SVQTVFAGSESLQRVVRLSRN-GDLMVTGGTDGHLRLWSFPKMKP-LLHIEAHSKEIDDVDFSISGE 172 (297)
Q Consensus 97 ~~i~~-~~~~~~-~~~~~~~~h~~~v~~~~~s~~-g~~l~s~~~d~~i~iwd~~~~~~-~~~~~~~~~~v~~~~~sp~~~ 172 (297)
..|+. ++.... ....+. .....+.++.|++. +.++++-...+.|..+++..... ...+...-.....+++.+.+.
T Consensus 13 ~~I~~i~l~~~~~~~~~~~-~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g 91 (318)
T 3sov_A 13 RDLRLVDATNGKENATIVV-GGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGE 91 (318)
T ss_dssp EEEEEEETTCTTSCCEEEE-EEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTT
T ss_pred CeEEEEECCCCceEEEEEe-cCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCC
Confidence 45666 766553 111221 22234668999985 45556666778899999876532 122222234567899987554
Q ss_pred EE-EEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCCC
Q psy3337 173 QI-VSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSG 251 (297)
Q Consensus 173 ~l-~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~ 251 (297)
.| ++-...+.|.++++... ....+.... . ..-..+++.|.+..|+.+.. + ..+.|...++...
T Consensus 92 ~ly~~d~~~~~I~~~~~dG~-~~~~l~~~~-~--------~~P~giavdp~~g~ly~td~-----~-~~~~I~r~~~dG~ 155 (318)
T 3sov_A 92 KLYWTDSETNRIEVSNLDGS-LRKVLFWQE-L--------DQPRAIALDPSSGFMYWTDW-----G-EVPKIERAGMDGS 155 (318)
T ss_dssp EEEEEETTTTEEEEEETTSC-SCEEEECSS-C--------SSEEEEEEEGGGTEEEEEEC-----S-SSCEEEEEETTSC
T ss_pred eEEEEECCCCEEEEEECCCC-cEEEEEeCC-C--------CCccEEEEeCCCCEEEEEec-----C-CCCEEEEEEcCCC
Confidence 44 44456678999998543 222221111 0 01123667876666666442 1 2478888888743
Q ss_pred ceEEEecc-CCCeEEEEEcCCCCEEEEEecCCCeEEEEEeCC
Q psy3337 252 RLRLAREM-KESLSALAVRDDGRFVAVGTMFTGSVFVYIAFS 292 (297)
Q Consensus 252 ~~~~~~~~-~~~v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~ 292 (297)
........ -.....++|+|++..|..+....+.|..+|+..
T Consensus 156 ~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG 197 (318)
T 3sov_A 156 SRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDG 197 (318)
T ss_dssp SCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCC
Confidence 32222222 233789999998777776665378899998753
No 279
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.79 E-value=0.0089 Score=54.40 Aligned_cols=182 Identities=8% Similarity=-0.032 Sum_probs=111.8
Q ss_pred CCceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCE-EEEEcCCCcEEEEeCCCCeeeEEeccccCCeeEEEEccCCC
Q psy3337 95 KEKNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDL-MVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGE 172 (297)
Q Consensus 95 ~d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~-l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~ 172 (297)
....|+. ++.+......+....-..+..++|++.... +++-..++.|..+++........+.........+++.+.+.
T Consensus 13 ~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~ 92 (628)
T 4a0p_A 13 RRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGK 92 (628)
T ss_dssp ETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTT
T ss_pred eCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCC
Confidence 3446666 887665444433233345779999996544 45666778899998865433333332234577899987665
Q ss_pred EEEEE-eCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCCC
Q psy3337 173 QIVSI-AKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSG 251 (297)
Q Consensus 173 ~l~s~-~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~ 251 (297)
.|+.+ ...+.|.+.++.... ...+.... . ..-..+++.|....|+.... | ..+.|...++...
T Consensus 93 ~LY~tD~~~~~I~v~~~dG~~-~~~l~~~~-l--------~~P~~iavdp~~G~lY~tD~-----g-~~~~I~r~~~dG~ 156 (628)
T 4a0p_A 93 NLYWADTGTNRIEVSKLDGQH-RQVLVWKD-L--------DSPRALALDPAEGFMYWTEW-----G-GKPKIDRAAMDGS 156 (628)
T ss_dssp EEEEEETTTTEEEEEETTSTT-CEEEECSS-C--------CCEEEEEEETTTTEEEEEEC-----S-SSCEEEEEETTSC
T ss_pred EEEEEECCCCEEEEEecCCCc-EEEEEeCC-C--------CCcccEEEccCCCeEEEeCC-----C-CCCEEEEEeCCCC
Confidence 55544 456788898885432 22222111 0 01124778886556666542 2 2468888888754
Q ss_pred ceEEEeccCCCeEEEEEcCCCCEEEEEecCCCeEEEEEeCC
Q psy3337 252 RLRLAREMKESLSALAVRDDGRFVAVGTMFTGSVFVYIAFS 292 (297)
Q Consensus 252 ~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~ 292 (297)
........-.....+++++++..|..+....+.|..+|+..
T Consensus 157 ~~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG 197 (628)
T 4a0p_A 157 ERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLG 197 (628)
T ss_dssp SCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred ceEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCC
Confidence 44333443344899999998887777765477888888754
No 280
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.78 E-value=0.004 Score=51.90 Aligned_cols=146 Identities=14% Similarity=0.154 Sum_probs=91.9
Q ss_pred CCEEEEEcCCCcEEEEeCCCCeeeEEeccccCCeeEEEEccC----CC---EEEEEeC---CCcEEEEEcC--CCceeee
Q psy3337 129 GDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSIS----GE---QIVSIAK---DGKAFVWNSK--NGSLSKE 196 (297)
Q Consensus 129 g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~----~~---~l~s~~~---d~~v~lwd~~--~~~~~~~ 196 (297)
..+++.....+-+.+||+ +++.+..+.. +.++.+..-|+ ++ ++++... +++|.+|++. ++ .+..
T Consensus 40 ~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~-~l~~ 115 (355)
T 3amr_A 40 NSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNG-TLQS 115 (355)
T ss_dssp GCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTC-CEEE
T ss_pred ccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCC-ceee
Confidence 345555566778999999 8888888753 56777777663 22 2333333 5789999773 33 3444
Q ss_pred eecc-CCCCceEEEEeeeeeeeee--CCC-Ce-EEEEeccCcccccCCCCeEEEEeCC-------CCceEEEeccCCCeE
Q psy3337 197 LKWN-TPDNIKYLFKRCRYGLVED--SPK-RS-RLFTLANPLAQNKRGISYVQQWDVD-------SGRLRLAREMKESLS 264 (297)
Q Consensus 197 ~~~~-~~~~~~~~~~~~~~~~~~~--s~~-~~-~l~~~~~~~~~~g~~d~~i~~wd~~-------~~~~~~~~~~~~~v~ 264 (297)
+... .|.... ......+++ +|. +. +++... .++.+..|++. +.+.++.+.....+.
T Consensus 116 i~~~~~pv~t~----~~~pyGlcly~~~~~g~~yafV~~--------k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~E 183 (355)
T 3amr_A 116 MTDPDHPIATA----INEVYGFTLYHSQKTGKYYAMVTG--------KEGEFEQYELKADKNGYISGKKVRAFKMNSQTE 183 (355)
T ss_dssp CSCTTSCEECC----CSSCCCEEEEECTTTCCEEEEEEC--------SSSEEEEEEEEECTTSCEEEEEEEEEECSSCEE
T ss_pred ccccccCcCCC----CCCeeEEEEEecCCCCcEEEEEEC--------CCCeEEEEEEEeCCCCcccceEEEEecCCCCcc
Confidence 4210 010000 001111334 564 43 444433 37899999882 346778888877799
Q ss_pred EEEEcCCCCEEEEEecCCCeEEEEEeC
Q psy3337 265 ALAVRDDGRFVAVGTMFTGSVFVYIAF 291 (297)
Q Consensus 265 ~~~~s~dg~~l~~~~~~dg~i~vwd~~ 291 (297)
.+.+.+....|+.+-+ +.-|..++..
T Consensus 184 gcvvDd~~g~Lyv~eE-d~GIw~~da~ 209 (355)
T 3amr_A 184 GMAADDEYGRLYIAEE-DEAIWKFSAE 209 (355)
T ss_dssp EEEEETTTTEEEEEET-TTEEEEEECS
T ss_pred eEEEcCCCCeEEEecc-cceEEEEeCC
Confidence 9999999999999999 8777777754
No 281
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.78 E-value=0.013 Score=54.63 Aligned_cols=173 Identities=6% Similarity=-0.107 Sum_probs=103.3
Q ss_pred EeeCCCeEEEEecCCCCcEEEEEEecCC-CEEEEEcCCCcEEEEeCCCC----eeeEEeccccCCeeEEEEccCCCEEEE
Q psy3337 102 GFKTFDSVQTVFAGSESLQRVVRLSRNG-DLMVTGGTDGHLRLWSFPKM----KPLLHIEAHSKEIDDVDFSISGEQIVS 176 (297)
Q Consensus 102 ~~~~~~~~~~~~~~h~~~v~~~~~s~~g-~~l~s~~~d~~i~iwd~~~~----~~~~~~~~~~~~v~~~~~sp~~~~l~s 176 (297)
++........+ .....+..++|++.. .++++-...+.|+.+++... .....+.........|++.+.+..|+.
T Consensus 410 ~l~~~~~~~l~--~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~ 487 (791)
T 3m0c_C 410 TLDRSEYTSLI--PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYW 487 (791)
T ss_dssp CTTSCCCEEEE--CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEE
T ss_pred eccCCcceeee--cCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEE
Confidence 44444433333 334456799999854 45556666788988888642 223333334456778999987755554
Q ss_pred E-eCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCCCceEE
Q psy3337 177 I-AKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSGRLRL 255 (297)
Q Consensus 177 ~-~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~~~ 255 (297)
+ ...+.|.+.++... ....+....- ..-..|+++|.+..||.+.. | ..+.|.+.++.......
T Consensus 488 tD~~~~~I~v~~ldG~-~~~~l~~~~l---------~~P~gIaVDp~~g~LYwtD~-----g-~~~~I~~~~~dG~~~~~ 551 (791)
T 3m0c_C 488 TDSVLGTVSVADTKGV-KRKTLFRENG---------SKPRAIVVDPVHGFMYWTDW-----G-TPAKIKKGGLNGVDIYS 551 (791)
T ss_dssp EETTTTEEEEEETTSS-SEEEEEECTT---------CCEEEEEEETTTTEEEEEEC-----S-SSCEEEEEETTSCCEEE
T ss_pred EecCCCeEEEEeCCCC-eEEEEEeCCC---------CCcceEEEecCCCCEEEecC-----C-CCCeEEEEecCCCceEE
Confidence 4 45688999998643 3333321110 01124778887666666543 1 13678888887544333
Q ss_pred EeccC-CCeEEEEEcCCCCEEEEEecCCCeEEEEEeCC
Q psy3337 256 AREMK-ESLSALAVRDDGRFVAVGTMFTGSVFVYIAFS 292 (297)
Q Consensus 256 ~~~~~-~~v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~ 292 (297)
.+... .....|++++.+..|+.+......|..+++..
T Consensus 552 lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG 589 (791)
T 3m0c_C 552 LVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 589 (791)
T ss_dssp EECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred EEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCC
Confidence 33333 34899999987777777665367888888753
No 282
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.73 E-value=0.0036 Score=54.32 Aligned_cols=159 Identities=13% Similarity=0.102 Sum_probs=91.0
Q ss_pred CCCCcEEEEEEecCCCEEEEEcCC---C-cEEEEeCCCCee-eEEeccccCCeeEEEEcc-CCCEEEEEeCCCcEEEEEc
Q psy3337 115 GSESLQRVVRLSRNGDLMVTGGTD---G-HLRLWSFPKMKP-LLHIEAHSKEIDDVDFSI-SGEQIVSIAKDGKAFVWNS 188 (297)
Q Consensus 115 ~h~~~v~~~~~s~~g~~l~s~~~d---~-~i~iwd~~~~~~-~~~~~~~~~~v~~~~~sp-~~~~l~s~~~d~~v~lwd~ 188 (297)
........++|+++|+++++.... . .+...+...+.. ...+. .-.....++++| ++.++++-..++.|+.+|.
T Consensus 179 ~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~ 257 (433)
T 4hw6_A 179 TNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDP 257 (433)
T ss_dssp CCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECT
T ss_pred cCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCeecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEEC
Confidence 344557899999999955554321 1 233333221111 01121 233456789999 6766666666788999998
Q ss_pred CCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCC--Cce--EEEeccC----
Q psy3337 189 KNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDS--GRL--RLAREMK---- 260 (297)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~--~~~--~~~~~~~---- 260 (297)
.++.....+....... . -..++++|++..|+.+.. ..+.|+.+++.. +.. ...+.+.
T Consensus 258 ~~g~~~~~~~~~~~~~--~------~~~ia~dpdG~~LYvad~-------~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~ 322 (433)
T 4hw6_A 258 ATGTLTEEEVMMDTKG--S------NFHIVWHPTGDWAYIIYN-------GKHCIYRVDYNRETGKLAVPYIVCGQHSSP 322 (433)
T ss_dssp TTCCEEEEEEECSCCS--S------CEEEEECTTSSEEEEEET-------TTTEEEEEEBCTTTCCBCCCEEEEECTTCC
T ss_pred CCCeEEEEEeccCCCC--C------cccEEEeCCCCEEEEEeC-------CCCEEEEEeCCCCCcccCcEEEEEecCCCC
Confidence 7776533332111110 0 013789999997776543 367899987652 321 1111111
Q ss_pred ------------CCeEEEEE---------cCCCCEEEEEecCCCeEEEEEe
Q psy3337 261 ------------ESLSALAV---------RDDGRFVAVGTMFTGSVFVYIA 290 (297)
Q Consensus 261 ------------~~v~~~~~---------s~dg~~l~~~~~~dg~i~vwd~ 290 (297)
.....+++ .++|.+.++-.. .+.|+.++.
T Consensus 323 g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~-n~~I~~~~~ 372 (433)
T 4hw6_A 323 GWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRD-SHTVRVLTP 372 (433)
T ss_dssp CCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETT-TTEEEEECT
T ss_pred ccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECC-CCEEEEECC
Confidence 12677999 667766666555 788888874
No 283
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.65 E-value=0.0015 Score=59.82 Aligned_cols=197 Identities=9% Similarity=-0.068 Sum_probs=95.2
Q ss_pred CCceEEE-EeeCCCeEEEEecCCCCcE-EEEEEecCCCEEEEEc-CC-----CcEEEEeCCCCeeeEEe----ccccCCe
Q psy3337 95 KEKNLRF-GFKTFDSVQTVFAGSESLQ-RVVRLSRNGDLMVTGG-TD-----GHLRLWSFPKMKPLLHI----EAHSKEI 162 (297)
Q Consensus 95 ~d~~i~~-~~~~~~~~~~~~~~h~~~v-~~~~~s~~g~~l~s~~-~d-----~~i~iwd~~~~~~~~~~----~~~~~~v 162 (297)
.+..+.+ |+.+.+....-. .+..+. .++++.+++++++.|+ .+ ..+.+||..+.+-...- ......-
T Consensus 263 ~~~~v~~yd~~t~~W~~~~~-~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~ 341 (656)
T 1k3i_A 263 DAKKTSLYDSSSDSWIPGPD-MQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTAD 341 (656)
T ss_dssp STTCEEEEEGGGTEEEECCC-CSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCC
T ss_pred CCCceEEecCcCCceeECCC-CCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCcccccccccc
Confidence 4456777 887765443222 222221 3556667999999998 44 57999999876522210 0000000
Q ss_pred eEEEEccCCCEEEEEeCC---------CcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCC-CCeEEEEeccC
Q psy3337 163 DDVDFSISGEQIVSIAKD---------GKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSP-KRSRLFTLANP 232 (297)
Q Consensus 163 ~~~~~sp~~~~l~s~~~d---------~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-~~~~l~~~~~~ 232 (297)
....+..++..++.++.+ ..+..||..+.............. ........-..+.+.. +++.++..+..
T Consensus 342 ~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~-~~~~~~~~~~av~~~~~~~~i~v~GG~~ 420 (656)
T 1k3i_A 342 KQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNR-GVAPDAMCGNAVMYDAVKGKILTFGGSP 420 (656)
T ss_dssp TTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETT-EECCCCBTCEEEEEETTTTEEEEECCBS
T ss_pred ccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCcccccc-ccCCCCCCCceEeccCCCCeEEEEeCCC
Confidence 001122345555555444 356788887655433221110000 0000000001122322 45555443210
Q ss_pred cccccCCCC---eEEEEeCCCCceEEEe--ccCCC--eEEEEEcCCCCEEEEEecCC-----------CeEEEEEeCCce
Q psy3337 233 LAQNKRGIS---YVQQWDVDSGRLRLAR--EMKES--LSALAVRDDGRFVAVGTMFT-----------GSVFVYIAFSLQ 294 (297)
Q Consensus 233 ~~~~g~~d~---~i~~wd~~~~~~~~~~--~~~~~--v~~~~~s~dg~~l~~~~~~d-----------g~i~vwd~~~~~ 294 (297)
......... .|.+||..+.+-.... ..+.. -.++++.|+|++++.|+. + ..+.+||..+.+
T Consensus 421 ~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~-~~~~~~~~~~~~~~v~~ydp~t~~ 499 (656)
T 1k3i_A 421 DYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQ-RRGIPFEDSTPVFTPEIYVPEQDT 499 (656)
T ss_dssp SSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCB-SBCCTTCCCSBCCCCEEEEGGGTE
T ss_pred CCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCc-ccCcCcCCCCcccceEEEcCCCCc
Confidence 000000011 6888888775543332 22222 345667789999999986 4 468999987654
No 284
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.61 E-value=0.023 Score=53.09 Aligned_cols=158 Identities=11% Similarity=-0.021 Sum_probs=96.2
Q ss_pred CcEEEEEEecCC-CEEEEEcCCCcEEEEeCCCCeeeEEeccccCCeeEEEEccCCCEEEEEeC--CCcEEEEEcCCCcee
Q psy3337 118 SLQRVVRLSRNG-DLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAK--DGKAFVWNSKNGSLS 194 (297)
Q Consensus 118 ~~v~~~~~s~~g-~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~--d~~v~lwd~~~~~~~ 194 (297)
.....|++.+.+ +++++-...+.|.+.++........+.........|++.|...+|+.+.. .+.|...++. |...
T Consensus 471 ~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~d-G~~~ 549 (791)
T 3m0c_C 471 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN-GVDI 549 (791)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT-SCCE
T ss_pred CCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecC-CCce
Confidence 345688898876 45556667789999998754433333334456889999997666666553 2678888875 3333
Q ss_pred eeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCCCceEEEeccC---CCeEEEEEcCC
Q psy3337 195 KELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSGRLRLAREMK---ESLSALAVRDD 271 (297)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~---~~v~~~~~s~d 271 (297)
..+.... + ..-..|++++.+..||.+.. ....|..+++........+... ....+|++.
T Consensus 550 ~~lv~~~-----l----~~P~GLavD~~~~~LYwaD~-------~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~-- 611 (791)
T 3m0c_C 550 YSLVTEN-----I----QWPNGITLDLLSGRLYWVDS-------KLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-- 611 (791)
T ss_dssp EEEECSS-----C----SCEEEEEEETTTTEEEEEET-------TTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE--
T ss_pred EEEEeCC-----C----CCceEEEEecCCCeEEEEeC-------CCCcEEEEecCCCceEEEecCCCccCCCCEEEEe--
Confidence 3332111 0 01123777877777777643 3568999999754444443332 125677764
Q ss_pred CCEEEEEecCCCeEEEEEeCCce
Q psy3337 272 GRFVAVGTMFTGSVFVYIAFSLQ 294 (297)
Q Consensus 272 g~~l~~~~~~dg~i~vwd~~~~~ 294 (297)
+..|+......+.|...|..+++
T Consensus 612 ~~~lYwtD~~~~~I~~~dk~tG~ 634 (791)
T 3m0c_C 612 EDKVFWTDIINEAIFSANRLTGS 634 (791)
T ss_dssp TTEEEEEETTTTEEEEEETTTCC
T ss_pred CCEEEEEECCCCEEEEEeCCCCc
Confidence 34555555437888888876664
No 285
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.56 E-value=0.029 Score=50.94 Aligned_cols=178 Identities=12% Similarity=0.084 Sum_probs=101.8
Q ss_pred CceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCEEE-EEcCCCcEEEEeCCCCee-eEEeccccCCeeEEEEccCCC
Q psy3337 96 EKNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDLMV-TGGTDGHLRLWSFPKMKP-LLHIEAHSKEIDDVDFSISGE 172 (297)
Q Consensus 96 d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~-s~~~d~~i~iwd~~~~~~-~~~~~~~~~~v~~~~~sp~~~ 172 (297)
.+.|+. ++........+..........++|++.+..|+ +-...+.|..+++..... ...+...-.....+++.+.+.
T Consensus 17 ~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~ 96 (619)
T 3s94_A 17 RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGE 96 (619)
T ss_dssp SSBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTT
T ss_pred cccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCC
Confidence 345666 76654311222213344567999999665555 444567888888865432 223333335688999999666
Q ss_pred EEEEE-eCCCcEEEEEcCCCceeeeeec---cCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeC
Q psy3337 173 QIVSI-AKDGKAFVWNSKNGSLSKELKW---NTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDV 248 (297)
Q Consensus 173 ~l~s~-~~d~~v~lwd~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~ 248 (297)
.|+.+ ...+.|.+.++... ....+.. ..|. .|++.|.+..|+.... | ..+.|...++
T Consensus 97 ~ly~~d~~~~~I~v~~~dG~-~~~~l~~~~l~~P~------------~Iavdp~~g~ly~tD~-----g-~~~~I~r~~~ 157 (619)
T 3s94_A 97 KLYWTDSETNRIEVSNLDGS-LRKVLFWQELDQPR------------AIALDPSSGFMYWTDW-----G-EVPKIERAGM 157 (619)
T ss_dssp EEEEEETTTTEEEEEETTSC-SCEEEECSSCSCCC------------CEEEETTTTEEEEEEC-----S-SSCEEEEEET
T ss_pred EEEEEeCCCCEEEEEECCCC-CEEEEEeCCCCCCc------------eEEEecCCCeEEEecc-----C-CCCEEEEEEC
Confidence 55554 45688999998643 3222321 1122 3677887666666543 2 2467777777
Q ss_pred CCCceEEEecc-CCCeEEEEEcCCCCEEEEEecCCCeEEEEEeCC
Q psy3337 249 DSGRLRLAREM-KESLSALAVRDDGRFVAVGTMFTGSVFVYIAFS 292 (297)
Q Consensus 249 ~~~~~~~~~~~-~~~v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~ 292 (297)
........... -.....+++++++..|..+....+.|..+|+..
T Consensus 158 dG~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG 202 (619)
T 3s94_A 158 DGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDG 202 (619)
T ss_dssp TSCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSC
T ss_pred CCCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCC
Confidence 64333333322 233899999998777776665477888888754
No 286
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.55 E-value=0.024 Score=46.36 Aligned_cols=156 Identities=8% Similarity=-0.086 Sum_probs=88.5
Q ss_pred EeeCCCeEEEEecCCCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCee-eEEec---------cccCCeeEEEEccCC
Q psy3337 102 GFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKP-LLHIE---------AHSKEIDDVDFSISG 171 (297)
Q Consensus 102 ~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~-~~~~~---------~~~~~v~~~~~sp~~ 171 (297)
+..+++...............++..+++..+++-..++.|+.+|..+++. +.... ..-.....+ +|++
T Consensus 101 d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg 178 (306)
T 2p4o_A 101 VKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFG 178 (306)
T ss_dssp ECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEET
T ss_pred cCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCC
Confidence 55555543222211222334555555555555655688999999775431 21110 111234555 7888
Q ss_pred CEEEEE-eCCCcEEEEEcCC-Cce--eeeee-ccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEE
Q psy3337 172 EQIVSI-AKDGKAFVWNSKN-GSL--SKELK-WNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQW 246 (297)
Q Consensus 172 ~~l~s~-~~d~~v~lwd~~~-~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~w 246 (297)
..|+.+ ...+.|..||+.. +.. ...+. ...|. .++++++|..+++... .+.|.++
T Consensus 179 ~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~~~P~------------gi~vd~dG~l~va~~~--------~~~V~~~ 238 (306)
T 2p4o_A 179 NFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNID------------DFAFDVEGNLYGATHI--------YNSVVRI 238 (306)
T ss_dssp TEEEEEETTTTEEEEEEBCTTSCBCCCEEEEESCCCS------------SEEEBTTCCEEEECBT--------TCCEEEE
T ss_pred CEEEEEeCCCCEEEEEEeCCCCCCCccEEEeccCCCC------------CeEECCCCCEEEEeCC--------CCeEEEE
Confidence 766555 4568899999864 321 11110 11122 3778999976555332 6789999
Q ss_pred eCCCCceEE--EeccC-CCeEEEEEc---CCCCEEEEEec
Q psy3337 247 DVDSGRLRL--AREMK-ESLSALAVR---DDGRFVAVGTM 280 (297)
Q Consensus 247 d~~~~~~~~--~~~~~-~~v~~~~~s---~dg~~l~~~~~ 280 (297)
|.. ++... .+... ..+.+++|. |+++.|++++.
T Consensus 239 ~~~-G~~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~ 277 (306)
T 2p4o_A 239 APD-RSTTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTN 277 (306)
T ss_dssp CTT-CCEEEEECGGGTCTTEEEEEECCSTTTTTEEEEEEC
T ss_pred CCC-CCEEEEeecccccCCceEEEEecccCCCCEEEEECC
Confidence 976 66533 34433 348999998 89888777664
No 287
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.54 E-value=0.00052 Score=63.39 Aligned_cols=155 Identities=11% Similarity=0.024 Sum_probs=90.7
Q ss_pred EEEEEEecC-CCEEEEEcCCCcEEEEeCCCCeeeEEeccccCCeeEEEEccCCCEEEEEeC-C-CcEEEEEcCCCceeee
Q psy3337 120 QRVVRLSRN-GDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAK-D-GKAFVWNSKNGSLSKE 196 (297)
Q Consensus 120 v~~~~~s~~-g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~-d-~~v~lwd~~~~~~~~~ 196 (297)
...+++.+. ++++++-...+.|.++++........+.........|++.|.+.+|+.+.. . +.|.++++.. .....
T Consensus 455 P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG-~~~~~ 533 (699)
T 1n7d_A 455 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG-VDIYS 533 (699)
T ss_dssp CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSS-CCCCE
T ss_pred cceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCC-CCeeE
Confidence 346777754 455555566788999997654433333323345678999996655555443 2 6777777642 22222
Q ss_pred ee---ccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCCCceEEEeccC---CCeEEEEEcC
Q psy3337 197 LK---WNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSGRLRLAREMK---ESLSALAVRD 270 (297)
Q Consensus 197 ~~---~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~---~~v~~~~~s~ 270 (297)
+. ...|. .|+++|++..|+.+.. ..+.|.++++........+... .....|++..
T Consensus 534 l~~~~l~~Pn------------Glavd~~~~~LY~aD~-------~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~ 594 (699)
T 1n7d_A 534 LVTENIQWPN------------GITLDLLSGRLYWVDS-------KLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE 594 (699)
T ss_dssp ESCSSCSSCC------------CEEECTTTCCEEEEET-------TTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEET
T ss_pred EEeCCCCCcc------------EEEEeccCCEEEEEec-------CCCeEEEEccCCCceEEEEecCCcCCCceEeEEEC
Confidence 21 11122 3788998777777543 3578999999753333333211 1255666654
Q ss_pred CCCEEEEEecCCCeEEEEEeCCceec
Q psy3337 271 DGRFVAVGTMFTGSVFVYIAFSLQMC 296 (297)
Q Consensus 271 dg~~l~~~~~~dg~i~vwd~~~~~~~ 296 (297)
+ .++++... .+.|..++..+++.+
T Consensus 595 ~-~lywtd~~-~~~V~~~d~~~G~~~ 618 (699)
T 1n7d_A 595 D-KVFWTDII-NEAIFSANRLTGSDV 618 (699)
T ss_dssp T-EEEEECST-TTCEEEEETTTEEEE
T ss_pred C-EEEEEeCC-CCeEEEEEccCCCce
Confidence 3 34444444 789999998776643
No 288
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.54 E-value=0.0003 Score=64.93 Aligned_cols=175 Identities=6% Similarity=-0.109 Sum_probs=98.7
Q ss_pred ceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCEEEEE-cCCCcEEEEeCCC----CeeeEEeccccCCeeEEEEccC
Q psy3337 97 KNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTG-GTDGHLRLWSFPK----MKPLLHIEAHSKEIDDVDFSIS 170 (297)
Q Consensus 97 ~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~-~~d~~i~iwd~~~----~~~~~~~~~~~~~v~~~~~sp~ 170 (297)
..|+. ++.+.+....+. ....+..++|++.+..|+.. ...+.|+.+++.. ......+.........|++.+.
T Consensus 386 ~~I~~id~~~~~~~~~~~--~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~ 463 (699)
T 1n7d_A 386 HEVRKMTLDRSEYTSLIP--NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI 463 (699)
T ss_dssp TC-CEECTTSCCEECCSC--CCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCS
T ss_pred cceEEEeCCCCcceeeec--cCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEee
Confidence 34555 666555443332 22345689999876655544 4567899999875 2222222222234567888864
Q ss_pred CC-EEEEEeCCCcEEEEEcCCCceeeeeec---cCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEE
Q psy3337 171 GE-QIVSIAKDGKAFVWNSKNGSLSKELKW---NTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQW 246 (297)
Q Consensus 171 ~~-~l~s~~~d~~v~lwd~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~w 246 (297)
+. ++++-...+.|.++++..... ..+.. ..|. .++++|.+..|+.+.. + ..+.|.++
T Consensus 464 ~g~LY~tD~~~~~I~v~d~dg~~~-~~l~~~~~~~P~------------giavDp~~g~ly~td~-----~-~~~~I~~~ 524 (699)
T 1n7d_A 464 HSNIYWTDSVLGTVSVADTKGVKR-KTLFREQGSKPR------------AIVVDPVHGFMYWTDW-----G-TPAKIKKG 524 (699)
T ss_dssp SSBCEECCTTTSCEEEEBSSSCCE-EEECCCSSCCCC------------CEECCSSSSCCEECCC-----S-SSCCEEBC
T ss_pred CCcEEEEeccCCeEEEEecCCCce-EEEEeCCCCCcc------------eEEEccCCCcEEEccc-----C-CCCeEEEE
Confidence 44 444445567899999764432 22211 1122 3667887666666432 1 13678887
Q ss_pred eCCCCceEEEecc-CCCeEEEEEcCCCCEEEEEecCCCeEEEEEeCC
Q psy3337 247 DVDSGRLRLAREM-KESLSALAVRDDGRFVAVGTMFTGSVFVYIAFS 292 (297)
Q Consensus 247 d~~~~~~~~~~~~-~~~v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~ 292 (297)
++........+.. -.....|+|+|++..|+.+....+.|.++++..
T Consensus 525 ~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG 571 (699)
T 1n7d_A 525 GLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 571 (699)
T ss_dssp CSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSS
T ss_pred eCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCC
Confidence 7764222222222 223778999998766666554377899998753
No 289
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.45 E-value=0.034 Score=52.07 Aligned_cols=156 Identities=8% Similarity=0.022 Sum_probs=96.8
Q ss_pred CcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCeeeEEec----cccCCeeEEEEccCCCEEEEEeCCCcEEEEEcCCCce
Q psy3337 118 SLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIE----AHSKEIDDVDFSISGEQIVSIAKDGKAFVWNSKNGSL 193 (297)
Q Consensus 118 ~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~----~~~~~v~~~~~sp~~~~l~s~~~d~~v~lwd~~~~~~ 193 (297)
..|.++...++|+.|..|..++-|.+||..+++...... .+...|.++...+++++.+.. . +-+.+||..+++.
T Consensus 406 ~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt-~-~Gl~~~~~~~~~~ 483 (795)
T 4a2l_A 406 NNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGT-L-SALVRFNPEQRSF 483 (795)
T ss_dssp SCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEE-S-SCEEEEETTTTEE
T ss_pred ccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEe-c-CceeEEeCCCCeE
Confidence 568899998888857777777779999988766432211 134578999998888866654 4 4588999877644
Q ss_pred eeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCCCceEEEec-------cC-CCeEE
Q psy3337 194 SKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSGRLRLARE-------MK-ESLSA 265 (297)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~-------~~-~~v~~ 265 (297)
........+.. +....+..+...++|...+.. . +.|..||..+++. .+. .. ..|.+
T Consensus 484 ~~~~~~~~~~~----~~~~~i~~i~~d~~g~lWigt---------~-~Gl~~~~~~~~~~--~~~~~~~~~~l~~~~i~~ 547 (795)
T 4a2l_A 484 TTIEKEKDGTP----VVSKQITTLFRDSHKRLWIGG---------E-EGLSVFKQEGLDI--QKASILPVSNVTKLFTNC 547 (795)
T ss_dssp EECCBCTTCCB----CCCCCEEEEEECTTCCEEEEE---------S-SCEEEEEEETTEE--EECCCSCSCGGGGSCEEE
T ss_pred EEccccccccc----cCCceEEEEEECCCCCEEEEe---------C-CceEEEeCCCCeE--EEecCCCCCCCCCCeeEE
Confidence 32211100000 011123345667777755442 2 5688899877655 222 11 23899
Q ss_pred EEEcCCCCEEEEEecCCCeEEEEEeCCce
Q psy3337 266 LAVRDDGRFVAVGTMFTGSVFVYIAFSLQ 294 (297)
Q Consensus 266 ~~~s~dg~~l~~~~~~dg~i~vwd~~~~~ 294 (297)
+...++|.+.+ |+. . -|..||..+.+
T Consensus 548 i~~d~~g~lWi-gT~-~-Gl~~~d~~~~~ 573 (795)
T 4a2l_A 548 IYEASNGIIWV-GTR-E-GFYCFNEKDKQ 573 (795)
T ss_dssp EEECTTSCEEE-EES-S-CEEEEETTTTE
T ss_pred EEECCCCCEEE-EeC-C-CceeECCCCCc
Confidence 99988887544 554 4 57788876543
No 290
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.44 E-value=0.028 Score=52.62 Aligned_cols=160 Identities=10% Similarity=0.090 Sum_probs=100.7
Q ss_pred CCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCeeeEEec-------cccCCeeEEEEccCCCEEEEEeCCCcEEEEEcC
Q psy3337 117 ESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIE-------AHSKEIDDVDFSISGEQIVSIAKDGKAFVWNSK 189 (297)
Q Consensus 117 ~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~-------~~~~~v~~~~~sp~~~~l~s~~~d~~v~lwd~~ 189 (297)
...|.++...++|.+.+ |..+ -|.+||..+++...... -....|.++...++|.+. .|+.++-|..|+..
T Consensus 262 ~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lW-igt~~~Gl~~~~~~ 338 (795)
T 4a2l_A 262 SNYIRSLAMDSQNRLWI-GTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGGMW-LGTYFGGLNYYHPI 338 (795)
T ss_dssp CSBEEEEEECTTSCEEE-EESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSCEE-EEESSSCEEEECGG
T ss_pred CCeEEEEEEcCCCCEEE-EeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcCEE-EEECCCCeEEeCCC
Confidence 35689999998887544 4445 58899987765433211 123569999999988755 46666778888875
Q ss_pred CCceeeeeeccC-CCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCCCceEEEecc---------
Q psy3337 190 NGSLSKELKWNT-PDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSGRLRLAREM--------- 259 (297)
Q Consensus 190 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~--------- 259 (297)
++.. ..+.... +.. .....+..+...++|...+ |+.++-|..||..+++.......
T Consensus 339 ~~~~-~~~~~~~~~~~----l~~~~V~~i~~d~~g~lWi---------Gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~ 404 (795)
T 4a2l_A 339 RNRF-KNIRNIPYKNS----LSDNVVSCIVEDKDKNLWI---------GTNDGGLNLYNPITQRFTSYTLQEDESARGIG 404 (795)
T ss_dssp GGSS-EEECCCTTSSS----CSCSSEEEEEECTTSCEEE---------EESSSCEEEECTTTCCEEEECCC------CCS
T ss_pred cccc-eEEcCCCCCCC----CCCCeeEEEEECCCCCEEE---------EECCCCeEEEcCCCCcEEEEecCCCCcccCCC
Confidence 5432 2221110 000 0112233466677776444 33467899999887654433211
Q ss_pred CCCeEEEEEcCCCCEEEEEecCCCeEEEEEeCCce
Q psy3337 260 KESLSALAVRDDGRFVAVGTMFTGSVFVYIAFSLQ 294 (297)
Q Consensus 260 ~~~v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~~~ 294 (297)
...|.++...++|+.|.+|+. ++-|.+||..+++
T Consensus 405 ~~~v~~i~~d~~g~~lWigt~-~~Gl~~~d~~~~~ 438 (795)
T 4a2l_A 405 SNNIKAVYVDEKKSLVYIGTH-AGGLSILHRNSGQ 438 (795)
T ss_dssp CSCEEEEEEETTTTEEEEEET-TTEEEEEETTTCC
T ss_pred CccEEEEEEcCCCCEEEEEeC-cCceeEEeCCCCc
Confidence 233999999989886777887 7889999987654
No 291
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.40 E-value=0.024 Score=47.60 Aligned_cols=159 Identities=13% Similarity=0.152 Sum_probs=88.7
Q ss_pred EEEEecCCCEEEEE------------cCCCcEEEEeCCC--Ceee-EEecc-----ccCCeeEEEEcc--CCC-EEEEE-
Q psy3337 122 VVRLSRNGDLMVTG------------GTDGHLRLWSFPK--MKPL-LHIEA-----HSKEIDDVDFSI--SGE-QIVSI- 177 (297)
Q Consensus 122 ~~~~s~~g~~l~s~------------~~d~~i~iwd~~~--~~~~-~~~~~-----~~~~v~~~~~sp--~~~-~l~s~- 177 (297)
.+...|+|..++++ ..+|.|.++|+.+ ++.. ..+.+ .......+.+.+ ++. +|+.+
T Consensus 54 Di~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvn 133 (355)
T 3sre_A 54 DLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVN 133 (355)
T ss_dssp EEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEE
T ss_pred eeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEE
Confidence 55567776555554 2689999999873 2221 12222 234567788766 454 34443
Q ss_pred eC--CCcEEEEEcCCCc-ee---eeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCc---------ccccCCCCe
Q psy3337 178 AK--DGKAFVWNSKNGS-LS---KELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPL---------AQNKRGISY 242 (297)
Q Consensus 178 ~~--d~~v~lwd~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~---------~~~g~~d~~ 242 (297)
.. +.+|.+|++.... .. ..+... + ....+.+...++|...++...-+ ...+...+.
T Consensus 134 h~~~~s~ielf~~d~~~~~~~~~~~~~g~-~--------~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~ 204 (355)
T 3sre_A 134 HPGSSSTVEVFKFQEEEKSLLHLKTIRHK-L--------LPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSF 204 (355)
T ss_dssp CSTTCCEEEEEEEETTTTEEEEEEEECCT-T--------CSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEE
T ss_pred CCCCCCeEEEEEEECCCCEEEEEeccccC-C--------CCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccE
Confidence 22 4677787765432 21 122111 1 11234577788888666533100 001223466
Q ss_pred EEEEeCCCCceEEEeccCCCeEEEEEcCCCCEEEEEecCCCeEEEEEeC
Q psy3337 243 VQQWDVDSGRLRLAREMKESLSALAVRDDGRFVAVGTMFTGSVFVYIAF 291 (297)
Q Consensus 243 i~~wd~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~dg~i~vwd~~ 291 (297)
|+.+|.. +.......-...+.++||||++.|+.+....+.|+.|++.
T Consensus 205 vyr~d~~--~~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~ 251 (355)
T 3sre_A 205 VTYYSPN--DVRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKH 251 (355)
T ss_dssp EEEECTT--CCEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEEC
T ss_pred EEEEECC--eEEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEEC
Confidence 7777663 3333333334479999999999887766437899999985
No 292
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.37 E-value=0.037 Score=47.83 Aligned_cols=70 Identities=13% Similarity=0.094 Sum_probs=49.4
Q ss_pred EEEEEEec-CCCEEEEEcCCCcEEEEeCCCCeeeEEec-cccCCeeEEEEccCCCEEEEE-eCCCcEEEEEcC
Q psy3337 120 QRVVRLSR-NGDLMVTGGTDGHLRLWSFPKMKPLLHIE-AHSKEIDDVDFSISGEQIVSI-AKDGKAFVWNSK 189 (297)
Q Consensus 120 v~~~~~s~-~g~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~s~-~~d~~v~lwd~~ 189 (297)
...++++| +|.++++-..++.|..++...+....... ........++|+|++++|+.+ ...+.|..++..
T Consensus 228 p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 228 CNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp CCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred ceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCC
Confidence 35788999 77777777778899999987665422222 122346789999999955544 567889998765
No 293
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.32 E-value=0.017 Score=47.64 Aligned_cols=185 Identities=13% Similarity=0.157 Sum_probs=106.1
Q ss_pred CCCCCceEEE-EeeCCCeEEEEecC----CC--CcEEEEEE---ecCCCEEEEEc-------------CCCcEEEEeCC-
Q psy3337 92 IDSKEKNLRF-GFKTFDSVQTVFAG----SE--SLQRVVRL---SRNGDLMVTGG-------------TDGHLRLWSFP- 147 (297)
Q Consensus 92 ~~~~d~~i~~-~~~~~~~~~~~~~~----h~--~~v~~~~~---s~~g~~l~s~~-------------~d~~i~iwd~~- 147 (297)
+.-..++|.. +...+........+ .. ..+..+.| .|+++++++.. .+..|..||+.
T Consensus 30 s~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~ 109 (334)
T 2p9w_A 30 SNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPL 109 (334)
T ss_dssp EETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSC
T ss_pred EeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCc
Confidence 3334556655 55444433332212 11 13579999 68887777543 26779999998
Q ss_pred --CCeeeEEec--ccc-----------CCeeEEEEccCCCEEEEEeCC-CcEEEEEcCCCceeeeeeccCCCCceEEEEe
Q psy3337 148 --KMKPLLHIE--AHS-----------KEIDDVDFSISGEQIVSIAKD-GKAFVWNSKNGSLSKELKWNTPDNIKYLFKR 211 (297)
Q Consensus 148 --~~~~~~~~~--~~~-----------~~v~~~~~sp~~~~l~s~~~d-~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~ 211 (297)
+++.+.... ... ....+++..++|+..++++.. +.|...+.. |+.+..+....|... ..
T Consensus 110 ~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pd-G~~~~~~~~~~~~~~----~~ 184 (334)
T 2p9w_A 110 SENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSAD-GKTVSTFAWESGNGG----QR 184 (334)
T ss_dssp CTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTT-SCCEEEEEECCCCSS----SC
T ss_pred CCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCC-CCEEeeeeecCCCcc----cc
Confidence 777665432 211 247899999999999988888 887777764 333333321211100 11
Q ss_pred eeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCCCce--EEEec-cC----CCeEEE-EEcCCCCEEEEEecCCC
Q psy3337 212 CRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSGRL--RLARE-MK----ESLSAL-AVRDDGRFVAVGTMFTG 283 (297)
Q Consensus 212 ~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~--~~~~~-~~----~~v~~~-~~s~dg~~l~~~~~~dg 283 (297)
..++-++++|+|..|+.... .+.|..+|+..... +..-. +. .....+ ..-.+|+.|+++....+
T Consensus 185 ~G~nGIv~~pdg~~Liv~~~--------~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~vllV~~~~~~ 256 (334)
T 2p9w_A 185 PGYSGITFDPHSNKLIAFGG--------PRALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPVGNESVLVGARAPY 256 (334)
T ss_dssp CSCSEEEEETTTTEEEEESS--------SSSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEETTEEEEEEEETTE
T ss_pred cCcceEEEeCCCCEEEEEcC--------CCeEEEEcCCCCcceeecccccCCcccccCcccccccccCCEEEEEEcCCCC
Confidence 22345889999998888543 89999999885322 21110 11 113343 33347777444443155
Q ss_pred eEEEEE
Q psy3337 284 SVFVYI 289 (297)
Q Consensus 284 ~i~vwd 289 (297)
.+.+.+
T Consensus 257 ~~~l~S 262 (334)
T 2p9w_A 257 AISFRS 262 (334)
T ss_dssp EEEEEC
T ss_pred EEEEEC
Confidence 555444
No 294
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.29 E-value=0.043 Score=46.12 Aligned_cols=154 Identities=14% Similarity=0.079 Sum_probs=80.9
Q ss_pred CcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCe-eeEEec---cccCCeeEEEEccC---CCEEEEEeC----C----Cc
Q psy3337 118 SLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMK-PLLHIE---AHSKEIDDVDFSIS---GEQIVSIAK----D----GK 182 (297)
Q Consensus 118 ~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~-~~~~~~---~~~~~v~~~~~sp~---~~~l~s~~~----d----~~ 182 (297)
.....++|.|+|+++++ ..++.|+++| .+++ .+..+. ........|+|+|+ +..|+.+.. + ..
T Consensus 29 ~~P~~ia~~pdG~l~V~-e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~ 106 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLVT-ERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNR 106 (354)
T ss_dssp SCEEEEEEEETTEEEEE-ETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEE
T ss_pred CCCeEEEEcCCCeEEEE-eCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceE
Confidence 34579999999985555 5569999997 4454 222221 12346889999997 444444332 2 56
Q ss_pred EEEEEcCCC--ce--eeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCccc-----ccCCCCeEEEEeCCCC--
Q psy3337 183 AFVWNSKNG--SL--SKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQ-----NKRGISYVQQWDVDSG-- 251 (297)
Q Consensus 183 v~lwd~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~-----~g~~d~~i~~wd~~~~-- 251 (297)
|..|+.... .. ...+....|.. . ...-..+.|.|||...++.....-. ..+..+.|..++....
T Consensus 107 v~r~~~~~~~~~~~~~~~l~~~~~~~-~----~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p 181 (354)
T 3a9g_A 107 VIRGRLDGSTFKLKEVKTLIDGIPGA-Y----IHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPP 181 (354)
T ss_dssp EEEEEECSSSCCEEEEEEEEEEEECC-S----SCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCC
T ss_pred EEEEEECCCCcCcCccEEEEEcCCCC-C----CcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCC
Confidence 777776543 11 01110000000 0 0011347899999866664321000 0112356777776532
Q ss_pred ------ceEEEeccCCCeEEEEEcC-CCCEEEEE
Q psy3337 252 ------RLRLAREMKESLSALAVRD-DGRFVAVG 278 (297)
Q Consensus 252 ------~~~~~~~~~~~v~~~~~s~-dg~~l~~~ 278 (297)
.....-.++.....++|+| +|.++++-
T Consensus 182 ~~npf~~~~i~a~G~rnp~Gla~d~~~g~l~v~d 215 (354)
T 3a9g_A 182 ADNPFPNSPIWSYGHRNPQGIDWHRASGVMVATE 215 (354)
T ss_dssp TTSSSTTCCEEEECCSCCCEEEECTTTCCEEEEE
T ss_pred CCCCCCCCcEEEEccCCcceEEEeCCCCCEEEEe
Confidence 1111112344477899999 56655543
No 295
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.28 E-value=0.036 Score=46.48 Aligned_cols=153 Identities=8% Similarity=0.063 Sum_probs=80.8
Q ss_pred cEEEEEEecCCCEEEEEcCCCcEEEEeCCCCee--eEEec---cccCCeeEEEEccC---CCEEEEEeC-C-----CcEE
Q psy3337 119 LQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKP--LLHIE---AHSKEIDDVDFSIS---GEQIVSIAK-D-----GKAF 184 (297)
Q Consensus 119 ~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~--~~~~~---~~~~~v~~~~~sp~---~~~l~s~~~-d-----~~v~ 184 (297)
.-..++|.|+|+++++ ..++.|++++ +++. +..+. ........|+|+|+ +..|+.+.. . ..|.
T Consensus 32 ~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~ 108 (352)
T 2ism_A 32 VPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVV 108 (352)
T ss_dssp CEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEE
T ss_pred CceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEE
Confidence 4579999999986655 4569999998 4432 22221 12346889999998 445544432 2 5677
Q ss_pred EEEcCCCce--eeeeeccCC--CCceEEEEeeeeeeeeeCCCCeEEEEeccCccc-----ccCCCCeEEEEeCCCC----
Q psy3337 185 VWNSKNGSL--SKELKWNTP--DNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQ-----NKRGISYVQQWDVDSG---- 251 (297)
Q Consensus 185 lwd~~~~~~--~~~~~~~~~--~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~-----~g~~d~~i~~wd~~~~---- 251 (297)
.|+...+.. ...+....| .. . ...-..++|.|||...++.....-. ..+..+.|..++....
T Consensus 109 r~~~~~~~~~~~~~l~~~~p~~~~-~----~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~ 183 (352)
T 2ism_A 109 RLRHLGERGVLDRVVLDGIPARPH-G----LHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPG 183 (352)
T ss_dssp EEEECSSCEEEEEEEEEEECCCTT-C----CCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTT
T ss_pred EEEeCCCCcCceEEEEEeCCCCCC-C----CcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCC
Confidence 788764321 011100001 00 0 0011347899999765554321000 0012367777776530
Q ss_pred ---------ceEEEeccCCCeEEEEEcC-CCCEEEEEe
Q psy3337 252 ---------RLRLAREMKESLSALAVRD-DGRFVAVGT 279 (297)
Q Consensus 252 ---------~~~~~~~~~~~v~~~~~s~-dg~~l~~~~ 279 (297)
.....-.++.....++|+| +|.++++-.
T Consensus 184 npf~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~ 221 (352)
T 2ism_A 184 NPFLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEH 221 (352)
T ss_dssp CTTTTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEE
T ss_pred CcccCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEc
Confidence 1111112334478899999 566555443
No 296
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.19 E-value=0.07 Score=45.60 Aligned_cols=146 Identities=16% Similarity=0.173 Sum_probs=89.4
Q ss_pred cCCCEEEEEcCCCcEEEEeCCCCeeeEEeccc----cCCeeEEEEccCCCEEEEEeCCCcEEEEEcCCCcee--------
Q psy3337 127 RNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAH----SKEIDDVDFSISGEQIVSIAKDGKAFVWNSKNGSLS-------- 194 (297)
Q Consensus 127 ~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~----~~~v~~~~~sp~~~~l~s~~~d~~v~lwd~~~~~~~-------- 194 (297)
.+|..++.+ .++.||.-++.....-+.+... -..+..+..+|+|++||..+ +..|.|-.+..+...
T Consensus 30 ~n~t~i~~a-~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~ 107 (452)
T 3pbp_A 30 QNGTRIVFI-QDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQD 107 (452)
T ss_dssp TTTTEEEEE-ETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHH
T ss_pred cCCCEEEEE-ECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCccccccc
Confidence 355555554 3467777777643333333322 22578899999999999875 458888888633211
Q ss_pred ----eeeeccCCCCceEEEEeeeeeeeeeCCCC---eEEEEeccCcccccCCCCeEEEEeCCCC--ceEEEec------c
Q psy3337 195 ----KELKWNTPDNIKYLFKRCRYGLVEDSPKR---SRLFTLANPLAQNKRGISYVQQWDVDSG--RLRLARE------M 259 (297)
Q Consensus 195 ----~~~~~~~~~~~~~~~~~~~~~~~~~s~~~---~~l~~~~~~~~~~g~~d~~i~~wd~~~~--~~~~~~~------~ 259 (297)
+.+.... . .......+..+.|+|-+ ..|++... |+.|++||+... ++. .+. +
T Consensus 108 ~~q~~ty~l~~-~---~~~~~s~I~qVlWHPl~~~ds~LVVLts--------D~~Ir~yDl~~s~~~P~-~L~k~~~~fg 174 (452)
T 3pbp_A 108 AFQIFHYSIDE-E---EVGPKSSIKKVLFHPKSYRDSCIVVLKE--------DDTITMFDILNSQEKPI-VLNKPNNSFG 174 (452)
T ss_dssp TTEEEEEEGGG-C---C--CCCCEEEEEECTTBGGGCEEEEEET--------TSCEEEEETTCTTSCCE-EESCCCSEEE
T ss_pred ccceeEEEcCC-c---ccCCCCceeEEEeccccCCCCeEEEEec--------CCEEEEEEcccCCCCCc-chhccccccC
Confidence 1111110 0 00012345668889864 46777766 999999999862 222 221 1
Q ss_pred ---C-CCeEEEEEcCCCCEEEEEe--cCCCeEEEE
Q psy3337 260 ---K-ESLSALAVRDDGRFVAVGT--MFTGSVFVY 288 (297)
Q Consensus 260 ---~-~~v~~~~~s~dg~~l~~~~--~~dg~i~vw 288 (297)
. ..|.+++|.+++-.|...+ . +|.|+-.
T Consensus 175 ~d~~~~ev~S~~Fg~~~lTLYvl~~t~-~GDIYAl 208 (452)
T 3pbp_A 175 LDARVNDITDLEFSKDGLTLYCLNTTE-GGDIFAF 208 (452)
T ss_dssp SCSSCCCEEEEEECTTSSCEEEEECTT-SCEEEEE
T ss_pred CCcccceEEEEEEcCCCcEEEEEecCC-CCCEEEE
Confidence 1 2389999999888777755 7 7887654
No 297
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.10 E-value=0.053 Score=49.23 Aligned_cols=159 Identities=9% Similarity=-0.042 Sum_probs=93.0
Q ss_pred CcEEEEEEecCC-CEEEEEcCCCcEEEEeCCCCeeeEEeccccCCeeEEEEccCCCEEEEEeC--CCcEEEEEcCCCcee
Q psy3337 118 SLQRVVRLSRNG-DLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAK--DGKAFVWNSKNGSLS 194 (297)
Q Consensus 118 ~~v~~~~~s~~g-~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~--d~~v~lwd~~~~~~~ 194 (297)
.....+++.+.+ +++++-...+.|.+.++........+...-.....|++.|.+..|+.+.. .+.|...++. |...
T Consensus 84 ~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~d-G~~~ 162 (619)
T 3s94_A 84 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMD-GSSR 162 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETT-SCSC
T ss_pred CCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECC-CCce
Confidence 456789999855 45556667789999998654332223234455789999997666665553 3566666664 3322
Q ss_pred eeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCCCceEEEeccC-CCeEEEEEcCCCC
Q psy3337 195 KELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSGRLRLAREMK-ESLSALAVRDDGR 273 (297)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~-~~v~~~~~s~dg~ 273 (297)
..+.... . . .-..+++++++..|+.+.. ..+.|..+|+............ ....++++..+
T Consensus 163 ~~l~~~~-~--~------~P~Glald~~~~~LY~aD~-------~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~-- 224 (619)
T 3s94_A 163 FIIINSE-I--Y------WPNGLTLDYEEQKLYWADA-------KLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED-- 224 (619)
T ss_dssp EEEECSS-C--S------SEEEEEEETTTTEEEEEET-------TTCCEEEESSSCCEEC---------CCCEEESSS--
T ss_pred EEEEeCC-C--C------CCcEEEEEccCCEEEEEeC-------CCCeEEEecCCCCccEEEEeCCCCCceEEEEeCC--
Confidence 2222110 0 0 1123778887777777643 3578999998753322222211 12567777655
Q ss_pred EEEEEecCCCeEEEEEeCCcee
Q psy3337 274 FVAVGTMFTGSVFVYIAFSLQM 295 (297)
Q Consensus 274 ~l~~~~~~dg~i~vwd~~~~~~ 295 (297)
.|+.+....+.|...|..+++.
T Consensus 225 ~ly~td~~~~~V~~~d~~tg~~ 246 (619)
T 3s94_A 225 ILYWTDWSTHSILACNKYTGEG 246 (619)
T ss_dssp EEEEECTTTCSEEEEESSSCCC
T ss_pred EEEEecCCCCEEEEEECCCCcc
Confidence 5555554378899999877753
No 298
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.09 E-value=0.094 Score=43.39 Aligned_cols=164 Identities=12% Similarity=0.122 Sum_probs=91.3
Q ss_pred CCCeEEEEecCCCCcEEEEEEecCCCEEEEEcCCCcEEEEeC--CCCeeeEEeccccCCeeEEEEccCCCEEEEEeCCCc
Q psy3337 105 TFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSF--PKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAKDGK 182 (297)
Q Consensus 105 ~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~--~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~d~~ 182 (297)
.|+....+..++...+..+.+.|++.+++.+...+..+-+|- .+.+.+. ......+..+.+.+++++++ ++.+|.
T Consensus 150 gG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~~--~~~~~~~~~~~~~~~g~~~~-~~~~G~ 226 (327)
T 2xbg_A 150 SGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPHN--RTTSRRLHNMGFTPDGRLWM-IVNGGK 226 (327)
T ss_dssp TTSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEEE--CCSSSCEEEEEECTTSCEEE-EETTTE
T ss_pred CCCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeECC--CCCCCccceeEECCCCCEEE-EeCCce
Confidence 344444443355667889999999888877654433344442 2333332 23456788999999887664 456787
Q ss_pred EEEEEcCCCceeeeeecc-CCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCCCceEEEecc--
Q psy3337 183 AFVWNSKNGSLSKELKWN-TPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSGRLRLAREM-- 259 (297)
Q Consensus 183 v~lwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~-- 259 (297)
+++.+...++.-..+... .+.. ..+..+.+.+++..++... ++.| .+..+.|+.-..+..
T Consensus 227 ~~~s~~D~G~tW~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~g~---------~g~i-~~S~DgG~tW~~~~~~~ 289 (327)
T 2xbg_A 227 IAFSDPDNSENWGELLSPLRRNS-------VGFLDLAYRTPNEVWLAGG---------AGAL-LCSQDGGQTWQQDVDVK 289 (327)
T ss_dssp EEEEETTEEEEECCCBCTTSSCC-------SCEEEEEESSSSCEEEEES---------TTCE-EEESSTTSSCEECGGGT
T ss_pred EEEecCCCCCeeEeccCCcccCC-------cceEEEEecCCCEEEEEeC---------CCeE-EEeCCCCcccEEcCccC
Confidence 777643324333322211 0110 0123456777766555422 4555 344454554444432
Q ss_pred --CCCeEEEEEcCCCCEEEEEecCCCeEEEEEe
Q psy3337 260 --KESLSALAVRDDGRFVAVGTMFTGSVFVYIA 290 (297)
Q Consensus 260 --~~~v~~~~~s~dg~~l~~~~~~dg~i~vwd~ 290 (297)
+..+.++.|.+++..++ ++. +|.|.-++-
T Consensus 290 ~~~~~~~~v~~~~~~~~~~-~G~-~G~i~~~~~ 320 (327)
T 2xbg_A 290 KVPSNFYKILFFSPDQGFI-LGQ-KGILLRYVT 320 (327)
T ss_dssp TSSSCCCEEEEEETTEEEE-ECS-TTEEEEECC
T ss_pred CCCCCeEEEEEECCCceEE-EcC-CceEEEEcC
Confidence 23488898886666554 455 888876653
No 299
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=97.01 E-value=0.15 Score=44.38 Aligned_cols=169 Identities=9% Similarity=0.089 Sum_probs=87.8
Q ss_pred CcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCee--eEEecc------ccCCeeEEEEccC---CCEEEEEe-C------
Q psy3337 118 SLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKP--LLHIEA------HSKEIDDVDFSIS---GEQIVSIA-K------ 179 (297)
Q Consensus 118 ~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~--~~~~~~------~~~~v~~~~~sp~---~~~l~s~~-~------ 179 (297)
...+.++|.|+|+++++-...+.|++++..+++. +..+.. ....+..|+|+|+ +..|+.+. .
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~ 106 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKST 106 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC-
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCC
Confidence 3457999999999777765545788887655543 222321 2356779999995 44444433 2
Q ss_pred ------CCcEEEEEcCCC--ce--eeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCccc--------------
Q psy3337 180 ------DGKAFVWNSKNG--SL--SKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQ-------------- 235 (297)
Q Consensus 180 ------d~~v~lwd~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~-------------- 235 (297)
...|.-|++..+ .. ...+....|.. . ...-..|.|.|||.+.++....-..
T Consensus 107 ~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~-~----~H~~~~l~f~pDG~Lyv~~Gd~~~~~~~~~~~~~~~~~~ 181 (454)
T 1cru_A 107 DKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSS-K----DHQSGRLVIGPDQKIYYTIGDQGRNQLAYLFLPNQAQHT 181 (454)
T ss_dssp -CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCC-S----SCCEEEEEECTTSCEEEEECCTTTTSGGGTTSCCCTTCC
T ss_pred ccccccccEEEEEEECCCCCCcCCcEEEEEcCCCC-C----CCCCCeEeECCCCeEEEEECCCCCCCccccccccccccc
Confidence 124555554322 11 11111000100 0 0112458899999877776541000
Q ss_pred -------c---cCCCCeEEEEeCCCC----c------eEEEe-ccCCCeEEEEEcCCCCEEEEEecCCCeEEEEEeC
Q psy3337 236 -------N---KRGISYVQQWDVDSG----R------LRLAR-EMKESLSALAVRDDGRFVAVGTMFTGSVFVYIAF 291 (297)
Q Consensus 236 -------~---g~~d~~i~~wd~~~~----~------~~~~~-~~~~~v~~~~~s~dg~~l~~~~~~dg~i~vwd~~ 291 (297)
. .+..+.|.-++.... . ....+ .++.....++|+|+|.+.++-...++.-.|.-+.
T Consensus 182 p~~~~~~aq~~~~~~G~IlRi~~dG~ip~~Npf~~~~~~ei~a~G~RNp~gla~dp~G~L~~~d~g~~~~dein~i~ 258 (454)
T 1cru_A 182 PTQQELNGKDYHTYMGKVLRLNLDGSIPKDNPSFNGVVSHIYTLGHRNPQGLAFTPNGKLLQSEQGPNSDDEINLIV 258 (454)
T ss_dssp CCHHHHHTTCCTTCSSEEEEECTTSCCCTTCCEETTEECSEEEBCCSEEEEEEECTTSCEEEEEECSSSCEEEEECC
T ss_pred cccccccccCCCCCCeeEEEEeCCCCCCCCCCCCCCCcceEEEECCCCcceEEECCCCCEEEEecCCCCCeEEEEec
Confidence 0 011356666665432 0 11122 2445589999999887665543214444444443
No 300
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.00 E-value=0.053 Score=45.52 Aligned_cols=154 Identities=8% Similarity=-0.046 Sum_probs=77.6
Q ss_pred cEEEEEEecCCC-EEEEEcCCCcEEEEeCCCCeee---EEe----ccccCCeeEEEEccC---CCEEEEE-eC-------
Q psy3337 119 LQRVVRLSRNGD-LMVTGGTDGHLRLWSFPKMKPL---LHI----EAHSKEIDDVDFSIS---GEQIVSI-AK------- 179 (297)
Q Consensus 119 ~v~~~~~s~~g~-~l~s~~~d~~i~iwd~~~~~~~---~~~----~~~~~~v~~~~~sp~---~~~l~s~-~~------- 179 (297)
....++|.|+|+ ++++ ...+.|++++.. +... ..+ .........|+|+|+ +..|+.+ ..
T Consensus 19 ~P~~i~~~pdG~~l~V~-e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~ 96 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLIT-LRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKA 96 (353)
T ss_dssp SEEEEEECSTTCCEEEE-ETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCE
T ss_pred CcEEEEEcCCCCEEEEE-eCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCc
Confidence 357999999998 5554 567899999853 3321 111 112345789999995 4444433 22
Q ss_pred CCcEEEEEcCCCc----eeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcc-----cccCCCCeEEEEeCCC
Q psy3337 180 DGKAFVWNSKNGS----LSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLA-----QNKRGISYVQQWDVDS 250 (297)
Q Consensus 180 d~~v~lwd~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~-----~~g~~d~~i~~wd~~~ 250 (297)
...|..|++..+. ....+....|.... ....-..+.|.|||.+.++.....- -..+..+.|.-++...
T Consensus 97 ~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~---~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG 173 (353)
T 2g8s_A 97 GTAVGYGRLSDDLSKVTDFRTVFRQMPKLST---GNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQG 173 (353)
T ss_dssp EEEEEEEEECTTSSBEEEEEEEEECSSCCBS---SSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTS
T ss_pred eeEEEEEEECCCCCCCCceEEEEEECCCCCC---CcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCC
Confidence 2346666664321 11111100010000 0000124789999976666433000 0001235777777653
Q ss_pred Cc------------eEEEe-ccCCCeEEEEEcC-CCCEEEE
Q psy3337 251 GR------------LRLAR-EMKESLSALAVRD-DGRFVAV 277 (297)
Q Consensus 251 ~~------------~~~~~-~~~~~v~~~~~s~-dg~~l~~ 277 (297)
.- ....+ .++.....++|+| +|++.++
T Consensus 174 ~~p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~ 214 (353)
T 2g8s_A 174 EIPDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLN 214 (353)
T ss_dssp CCCTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEE
T ss_pred CCCCCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEE
Confidence 20 11111 2344488999999 5554443
No 301
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.98 E-value=0.13 Score=43.05 Aligned_cols=157 Identities=11% Similarity=0.039 Sum_probs=85.8
Q ss_pred CCCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCee--eEEe----ccccCCeeEEEEccC---CCEEEEE-e--CCCc
Q psy3337 115 GSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKP--LLHI----EAHSKEIDDVDFSIS---GEQIVSI-A--KDGK 182 (297)
Q Consensus 115 ~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~--~~~~----~~~~~~v~~~~~sp~---~~~l~s~-~--~d~~ 182 (297)
..-..-+.++|.|||+++++--..|.|++++...++. +..+ .........|+|+|+ ...|+.. + .+..
T Consensus 29 ~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~ 108 (347)
T 3das_A 29 TGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNR 108 (347)
T ss_dssp CCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEE
T ss_pred cCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCE
Confidence 3344567999999999888776689999998665543 2222 123456889999995 3334332 2 3445
Q ss_pred EEEEEcCCCc----e---eee-eeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccc-----cCCCCeEEEEeCC
Q psy3337 183 AFVWNSKNGS----L---SKE-LKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQN-----KRGISYVQQWDVD 249 (297)
Q Consensus 183 v~lwd~~~~~----~---~~~-~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~-----g~~d~~i~~wd~~ 249 (297)
|.-|.+..+. . ... +... |.. ....-..|.|.|||.+.++.....-.. .+..+.|.-.+..
T Consensus 109 v~R~~~~~~~~~~~~~~~~~~i~~~~-p~~-----~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~d 182 (347)
T 3das_A 109 IVRMLYDEKKPSGEQLGAPDTVFRGI-PKG-----VIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPD 182 (347)
T ss_dssp EEEEEBCTTSCTTCCBCCCEEEEEEE-CCC-----SSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTT
T ss_pred EEEEEeCCCCcccccCCCcEEEEEcC-CCC-----CCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCC
Confidence 6556554321 0 011 1100 000 000113488999998777764310000 0124566666665
Q ss_pred CC--------c-eEEEeccCCCeEEEEEcCCCCEEEEE
Q psy3337 250 SG--------R-LRLAREMKESLSALAVRDDGRFVAVG 278 (297)
Q Consensus 250 ~~--------~-~~~~~~~~~~v~~~~~s~dg~~l~~~ 278 (297)
.. . .+. -.++.....++|+|+|.+.++=
T Consensus 183 G~ip~~nPf~~~~i~-a~G~RNp~Gla~dp~G~L~~~d 219 (347)
T 3das_A 183 GEPAPGNPFPGSPVY-SYGHRNVQGLAWDDKQRLFASE 219 (347)
T ss_dssp SSBCTTCSSTTCCEE-EBCCSBCCEEEECTTCCEEEEE
T ss_pred CCccCCCCCCCCeEE-eeCCCCcceEEECCCCCEEEEe
Confidence 32 1 111 1244457899999987766543
No 302
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=96.96 E-value=0.21 Score=45.34 Aligned_cols=155 Identities=8% Similarity=-0.093 Sum_probs=93.6
Q ss_pred cEEEEEEecCCC-EEEEEcCCCcEEEEeCCCCeeeEEeccccCCeeEEEEccCCCEEEEEeC--CCcEEEEEcCCCceee
Q psy3337 119 LQRVVRLSRNGD-LMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAK--DGKAFVWNSKNGSLSK 195 (297)
Q Consensus 119 ~v~~~~~s~~g~-~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~--d~~v~lwd~~~~~~~~ 195 (297)
....+++.+.+. +.++-...+.|.+.++........+...-....+|++.|....|+.+.. .+.|...++.... ..
T Consensus 81 ~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~-~~ 159 (628)
T 4a0p_A 81 YPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSE-RT 159 (628)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS-CE
T ss_pred CcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCc-eE
Confidence 356888887654 5556666788999998644322223233456789999996556665553 4567777765332 22
Q ss_pred eeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCCCceEEEeccC-CCeEEEEEcCCCCE
Q psy3337 196 ELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSGRLRLAREMK-ESLSALAVRDDGRF 274 (297)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~-~~v~~~~~s~dg~~ 274 (297)
.+.... ..-..+++++++..|+.+.. ..+.|..+|+..... ..+... ....++++.. + .
T Consensus 160 ~l~~~~----------~~P~GlalD~~~~~LY~aD~-------~~~~I~~~d~dG~~~-~v~~~~l~~P~glav~~-~-~ 219 (628)
T 4a0p_A 160 TLVPNV----------GRANGLTIDYAKRRLYWTDL-------DTNLIESSNMLGLNR-EVIADDLPHPFGLTQYQ-D-Y 219 (628)
T ss_dssp EEECSC----------SSEEEEEEETTTTEEEEEET-------TTTEEEEEETTSCSC-EEEEECCSCEEEEEEET-T-E
T ss_pred EEECCC----------CCcceEEEccccCEEEEEEC-------CCCEEEEEcCCCCce-EEeeccCCCceEEEEEC-C-E
Confidence 221110 01123778888777777643 367899999976433 233222 2367888864 3 4
Q ss_pred EEEEecCCCeEEEEEeCCce
Q psy3337 275 VAVGTMFTGSVFVYIAFSLQ 294 (297)
Q Consensus 275 l~~~~~~dg~i~vwd~~~~~ 294 (297)
|+......+.|...|..+++
T Consensus 220 ly~tD~~~~~I~~~dk~tg~ 239 (628)
T 4a0p_A 220 IYWTDWSRRSIERANKTSGQ 239 (628)
T ss_dssp EEEEETTTTEEEEEETTTCC
T ss_pred EEEecCCCCEEEEEECCCCC
Confidence 54444437889999876664
No 303
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=96.90 E-value=0.015 Score=53.15 Aligned_cols=120 Identities=8% Similarity=-0.008 Sum_probs=70.9
Q ss_pred EEEEec-CCCEEEEEcCCC-----------cEEEEeCCCCe--eeEEecc-ccCCeeEEEEccCCCEEEEEeC-CCcEEE
Q psy3337 122 VVRLSR-NGDLMVTGGTDG-----------HLRLWSFPKMK--PLLHIEA-HSKEIDDVDFSISGEQIVSIAK-DGKAFV 185 (297)
Q Consensus 122 ~~~~s~-~g~~l~s~~~d~-----------~i~iwd~~~~~--~~~~~~~-~~~~v~~~~~sp~~~~l~s~~~-d~~v~l 185 (297)
++++.| +++.++.|+.+. .+.+||+.+++ .+..+.. +.....++++.+++++++.|+. +..+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 567777 888888887543 58899987765 2333322 2333446788889999999984 468999
Q ss_pred EEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCCCc
Q psy3337 186 WNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSGR 252 (297)
Q Consensus 186 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~ 252 (297)
||+.+.+-...-. .+.... ...++..++++.++..+.. -.+..-..+.+||..+.+
T Consensus 270 yd~~t~~W~~~~~--~~~~R~-------~~s~~~~~dg~iyv~GG~~--~~~~~~~~~e~yd~~t~~ 325 (656)
T 1k3i_A 270 YDSSSDSWIPGPD--MQVARG-------YQSSATMSDGRVFTIGGSW--SGGVFEKNGEVYSPSSKT 325 (656)
T ss_dssp EEGGGTEEEECCC--CSSCCS-------SCEEEECTTSCEEEECCCC--CSSSCCCCEEEEETTTTE
T ss_pred ecCcCCceeECCC--CCcccc-------ccceEEecCCeEEEEeCcc--cCCcccccceEeCCCCCc
Confidence 9988664332211 111100 0123345677766663310 000112579999998755
No 304
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=96.77 E-value=0.25 Score=43.33 Aligned_cols=115 Identities=16% Similarity=0.078 Sum_probs=66.8
Q ss_pred cEEEEEE-------ecCCCEEEEEcCCC-------cEEEEeCCC-Ceee-----EEeccccCCeeEEEEccC-CCEEEEE
Q psy3337 119 LQRVVRL-------SRNGDLMVTGGTDG-------HLRLWSFPK-MKPL-----LHIEAHSKEIDDVDFSIS-GEQIVSI 177 (297)
Q Consensus 119 ~v~~~~~-------s~~g~~l~s~~~d~-------~i~iwd~~~-~~~~-----~~~~~~~~~v~~~~~sp~-~~~l~s~ 177 (297)
....++| +++|++|+.+...+ .|.+++... +... ..+.. ......++++|+ +.++++-
T Consensus 187 ~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~-~~~p~giavdp~~g~LYvtd 265 (496)
T 3kya_A 187 RIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAA-YKQCNGATIHPINGELYFNS 265 (496)
T ss_dssp BEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEE-ESCCCCEEECTTTCCEEEEE
T ss_pred CCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeecc-CCCceEEEEcCCCCeEEEEE
Confidence 4789999 99998666555443 266665433 2221 22221 124567899995 5555556
Q ss_pred eCCCcEEEEEcC-------CCce-----------eeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCC
Q psy3337 178 AKDGKAFVWNSK-------NGSL-----------SKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRG 239 (297)
Q Consensus 178 ~~d~~v~lwd~~-------~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~ 239 (297)
..++.|..+|+. ++.. ...+. ..+.. . .-..++++|+|..|+.+.. .
T Consensus 266 ~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~-~~~~~-~------~p~~ia~~p~G~~lYvaD~-------~ 330 (496)
T 3kya_A 266 YEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLF-TIADP-S------WEFQIFIHPTGKYAYFGVI-------N 330 (496)
T ss_dssp TTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEE-ECSSS-S------CCEEEEECTTSSEEEEEET-------T
T ss_pred CCCCEEEEEecccccccccCceeecccccccccccceeE-ecCCC-C------CceEEEEcCCCCEEEEEeC-------C
Confidence 677889999987 4443 11111 00110 0 1124889999997666532 3
Q ss_pred CCeEEEEeCC
Q psy3337 240 ISYVQQWDVD 249 (297)
Q Consensus 240 d~~i~~wd~~ 249 (297)
.+.|+.++..
T Consensus 331 ~h~I~kid~d 340 (496)
T 3kya_A 331 NHYFMRSDYD 340 (496)
T ss_dssp TTEEEEEEEE
T ss_pred CCEEEEEecC
Confidence 6788886654
No 305
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.71 E-value=0.32 Score=45.31 Aligned_cols=154 Identities=14% Similarity=0.108 Sum_probs=92.9
Q ss_pred CcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCeeeEEe---ccccCCeeEEEEccCCCEEEEEeCCCcEEEEEcCCCcee
Q psy3337 118 SLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHI---EAHSKEIDDVDFSISGEQIVSIAKDGKAFVWNSKNGSLS 194 (297)
Q Consensus 118 ~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~---~~~~~~v~~~~~sp~~~~l~s~~~d~~v~lwd~~~~~~~ 194 (297)
..|.++...++|+ |..|..++-|..||..++...... ......|.++...+++.+.+ |+.++-|..+|..+++..
T Consensus 363 ~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~ 440 (781)
T 3v9f_A 363 KVVSSVCDDGQGK-LWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKKFQ 440 (781)
T ss_dssp SCEEEEEECTTSC-EEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEE-EETTEEEEEECSSSCEEE
T ss_pred cceEEEEEcCCCC-EEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEE-EeccCCEEEEcCCCCcEE
Confidence 5688998888876 556665666888997654322111 12345688999888887555 666667889998766432
Q ss_pred eeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCCCceEEEeccC------CCeEEEEE
Q psy3337 195 KELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSGRLRLAREMK------ESLSALAV 268 (297)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~------~~v~~~~~ 268 (297)
.+.... .. ...+..+...+++...+. +. +.|..||..+++........ ..|.++..
T Consensus 441 -~~~~~~-~~------~~~v~~i~~d~~g~lwig---------t~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~ 502 (781)
T 3v9f_A 441 -IIELEK-NE------LLDVRVFYEDKNKKIWIG---------TH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQ 502 (781)
T ss_dssp -ECCSTT-TC------CCCEEEEEECTTSEEEEE---------ET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEE
T ss_pred -EeccCC-CC------CCeEEEEEECCCCCEEEE---------EC-CceEEEeCCCCeEEecccCcccccccceeEEEEE
Confidence 221110 00 012223556777765543 22 56889998876544332221 33899999
Q ss_pred cCCCCEEEEEecCCCeEEEEEeCCc
Q psy3337 269 RDDGRFVAVGTMFTGSVFVYIAFSL 293 (297)
Q Consensus 269 s~dg~~l~~~~~~dg~i~vwd~~~~ 293 (297)
.++|.+.+. +. ++-|..||..+.
T Consensus 503 d~~g~lWig-t~-~~Gl~~~~~~~~ 525 (781)
T 3v9f_A 503 DSEGRFWIG-TF-GGGVGIYTPDMQ 525 (781)
T ss_dssp CTTCCEEEE-ES-SSCEEEECTTCC
T ss_pred cCCCCEEEE-Ec-CCCEEEEeCCCC
Confidence 988876554 43 445777876554
No 306
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.68 E-value=0.13 Score=43.94 Aligned_cols=141 Identities=16% Similarity=0.122 Sum_probs=86.4
Q ss_pred CCceEEE-EeeCCCeEEEEecCC---CCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCe------------eeEEecc-
Q psy3337 95 KEKNLRF-GFKTFDSVQTVFAGS---ESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMK------------PLLHIEA- 157 (297)
Q Consensus 95 ~d~~i~~-~~~~~~~~~~~~~~h---~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~------------~~~~~~~- 157 (297)
.++.||. ++..+...+.+...+ -..|..+..||+|++||..+ +..|.|-.+..+. ..+.+.-
T Consensus 39 ~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~ 117 (452)
T 3pbp_A 39 QDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSID 117 (452)
T ss_dssp ETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGG
T ss_pred ECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccccccceeEEEcC
Confidence 3567887 666444555555221 22477899999999999875 5578888876321 1122221
Q ss_pred -----ccCCeeEEEEcc---CCCEEEEEeCCCcEEEEEcCCCc--eeeeeeccCCCCceEEE--EeeeeeeeeeCCCCeE
Q psy3337 158 -----HSKEIDDVDFSI---SGEQIVSIAKDGKAFVWNSKNGS--LSKELKWNTPDNIKYLF--KRCRYGLVEDSPKRSR 225 (297)
Q Consensus 158 -----~~~~v~~~~~sp---~~~~l~s~~~d~~v~lwd~~~~~--~~~~~~~~~~~~~~~~~--~~~~~~~~~~s~~~~~ 225 (297)
...+|..+.|+| .+..|++-..|+.|++||+.... +. .+.-.. . .+.. ....+.+++|.+++-.
T Consensus 118 ~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~--~-~fg~d~~~~ev~S~~Fg~~~lT 193 (452)
T 3pbp_A 118 EEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPN--N-SFGLDARVNDITDLEFSKDGLT 193 (452)
T ss_dssp GCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCC--S-EEESCSSCCCEEEEEECTTSSC
T ss_pred CcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccc--c-ccCCCcccceEEEEEEcCCCcE
Confidence 246799999999 45689999999999999997522 22 232110 0 1100 0023446788888877
Q ss_pred EEEeccCcccccCCCCeEEEE
Q psy3337 226 LFTLANPLAQNKRGISYVQQW 246 (297)
Q Consensus 226 l~~~~~~~~~~g~~d~~i~~w 246 (297)
|+.+.. +..|.|+-.
T Consensus 194 LYvl~~------t~~GDIYAl 208 (452)
T 3pbp_A 194 LYCLNT------TEGGDIFAF 208 (452)
T ss_dssp EEEEEC------TTSCEEEEE
T ss_pred EEEEec------CCCCCEEEE
Confidence 777441 235666654
No 307
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.52 E-value=0.31 Score=45.47 Aligned_cols=155 Identities=12% Similarity=0.087 Sum_probs=90.8
Q ss_pred CCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCeeeEEeccc-----cCCeeEEEEccCCCEEEEEeCCCcEEEEEcCCC
Q psy3337 117 ESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAH-----SKEIDDVDFSISGEQIVSIAKDGKAFVWNSKNG 191 (297)
Q Consensus 117 ~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~-----~~~v~~~~~sp~~~~l~s~~~d~~v~lwd~~~~ 191 (297)
...|.++...++|++. .|.. +-|..||..+++........ ...|.++...+++++.+. +.++-|..||..++
T Consensus 449 ~~~v~~i~~d~~g~lw-igt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWig-t~~~Gl~~~~~~~~ 525 (781)
T 3v9f_A 449 LLDVRVFYEDKNKKIW-IGTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIG-TFGGGVGIYTPDMQ 525 (781)
T ss_dssp CCCEEEEEECTTSEEE-EEET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEE-ESSSCEEEECTTCC
T ss_pred CCeEEEEEECCCCCEE-EEEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEE-EcCCCEEEEeCCCC
Confidence 4578899888887644 4444 56888998776543322211 357899999988876654 44344778887665
Q ss_pred ceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCCCceEEEec--c-C-CCeEEEE
Q psy3337 192 SLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSGRLRLARE--M-K-ESLSALA 267 (297)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~--~-~-~~v~~~~ 267 (297)
+. ..+...... ....+..+...++|...+.. ..|-|..||..+++....-. + . ..|.++.
T Consensus 526 ~~-~~~~~~~~l------~~~~i~~i~~d~~g~lWi~T---------~~Glv~~~d~~~~~~~~~~~~~gl~~~~i~~i~ 589 (781)
T 3v9f_A 526 LV-RKFNQYEGF------CSNTINQIYRSSKGQMWLAT---------GEGLVCFPSARNFDYQVFQRKEGLPNTHIRAIS 589 (781)
T ss_dssp EE-EEECTTTTC------SCSCEEEEEECTTSCEEEEE---------TTEEEEESCTTTCCCEEECGGGTCSCCCCCEEE
T ss_pred eE-EEccCCCCC------CCCeeEEEEECCCCCEEEEE---------CCCceEEECCCCCcEEEccccCCCCCceEEEEE
Confidence 43 333211100 11123345567777755542 24444888887765432211 1 1 2388888
Q ss_pred EcCCCCEEEEEecCCCeEEEEEeCCc
Q psy3337 268 VRDDGRFVAVGTMFTGSVFVYIAFSL 293 (297)
Q Consensus 268 ~s~dg~~l~~~~~~dg~i~vwd~~~~ 293 (297)
..++|.+.+++ . +| |..|+..+.
T Consensus 590 ~d~~g~lW~~t-~-~G-l~~~~~~~~ 612 (781)
T 3v9f_A 590 EDKNGNIWAST-N-TG-ISCYITSKK 612 (781)
T ss_dssp ECSSSCEEEEC-S-SC-EEEEETTTT
T ss_pred ECCCCCEEEEc-C-Cc-eEEEECCCC
Confidence 88888765554 3 55 666676544
No 308
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.31 E-value=0.4 Score=40.17 Aligned_cols=165 Identities=8% Similarity=0.036 Sum_probs=93.0
Q ss_pred CCceEEE-EeeC--CCeEEEEe-cC-----CCCcEEEEEEec--CCC-EE-EEEcC--CCcEEEEeCCCC--e--eeEEe
Q psy3337 95 KEKNLRF-GFKT--FDSVQTVF-AG-----SESLQRVVRLSR--NGD-LM-VTGGT--DGHLRLWSFPKM--K--PLLHI 155 (297)
Q Consensus 95 ~d~~i~~-~~~~--~~~~~~~~-~~-----h~~~v~~~~~s~--~g~-~l-~s~~~--d~~i~iwd~~~~--~--~~~~~ 155 (297)
.++.|.+ ++.+ ++. ..+. .+ ..-....+.+.+ ++. +| ++-.. +..|.+|++... . .+..+
T Consensus 81 ~~G~I~~~d~~~~~~~~-~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~ 159 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAV-SELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTI 159 (355)
T ss_dssp -CCEEEEEETTSSSCCE-EECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEE
T ss_pred CCCeEEEEecCCCCCce-EEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEecc
Confidence 5677777 8763 332 2222 13 123567788766 453 34 44333 467788776532 2 23344
Q ss_pred ccc-cCCeeEEEEccCCCEEEEEeC---C--------------CcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeee
Q psy3337 156 EAH-SKEIDDVDFSISGEQIVSIAK---D--------------GKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLV 217 (297)
Q Consensus 156 ~~~-~~~v~~~~~sp~~~~l~s~~~---d--------------~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (297)
.+. -...+++.+.++|+++++... | +.|+.+|. ++ +..+. -....-+.+
T Consensus 160 ~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~-~~~~~----------~~l~~pNGi 226 (355)
T 3sre_A 160 RHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--ND-VRVVA----------EGFDFANGI 226 (355)
T ss_dssp CCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--TC-CEEEE----------EEESSEEEE
T ss_pred ccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--Ce-EEEee----------cCCcccCcc
Confidence 332 235789999999988777541 1 33444443 21 11111 011122458
Q ss_pred eeCCCCeEEEEeccCcccccCCCCeEEEEeCCC-Cce--EEEeccCCCeEEEEEcC-CCCEEEEEec
Q psy3337 218 EDSPKRSRLFTLANPLAQNKRGISYVQQWDVDS-GRL--RLAREMKESLSALAVRD-DGRFVAVGTM 280 (297)
Q Consensus 218 ~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~-~~~--~~~~~~~~~v~~~~~s~-dg~~l~~~~~ 280 (297)
+|+||++.++.+.. ..+.|+.|++.. ++. ...+......-.+++.+ +|++.+++..
T Consensus 227 a~spDg~~lYvadt-------~~~~I~~~~~~~~g~l~~~~~~~~~g~PDGi~vD~e~G~lwva~~~ 286 (355)
T 3sre_A 227 NISPDGKYVYIAEL-------LAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDLWVGCHP 286 (355)
T ss_dssp EECTTSSEEEEEEG-------GGTEEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCCEEEEEES
T ss_pred eECCCCCEEEEEeC-------CCCeEEEEEECCCCcEecCEEEeCCCCCceEEEeCCCCcEEEEecC
Confidence 99999998888653 357899999864 432 22343333378899999 5988776654
No 309
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=96.24 E-value=0.4 Score=39.57 Aligned_cols=184 Identities=8% Similarity=0.041 Sum_probs=103.6
Q ss_pred eEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCeeeEEeccccCCeeEEEEccCCCEEEE
Q psy3337 98 NLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVS 176 (297)
Q Consensus 98 ~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s 176 (297)
++.+ |+.++....... -.+. +.-.+|..+.+|--. ..++.++|+++.+.+..+.- ...|.--.|-.+. .|+.
T Consensus 50 ~VvIiDl~n~~~~~Rrp--i~Ad--sAIMnP~~~ViALra-g~~LQiFnletK~klks~~~-~e~VvfWkWis~~-~L~l 122 (365)
T 2xzh_A 50 QVVIIDMNDPSNPIRRP--ISAD--SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLN-TVAL 122 (365)
T ss_dssp EEEEEETTSTTSCEEEE--CCCS--EEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEEC-SSCEEEEEECSSS-EEEE
T ss_pred EEEEEECCCCCCccccc--cccc--eeeeCCCccEEEEec-CCeEEEechHHhhhhcceec-CCccEEEEecCCC-eEEE
Confidence 4555 666655432222 1111 445688888777665 67899999999988877764 4578888886544 4444
Q ss_pred EeCCCcEEEEEcCC-CceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccC-----------------------
Q psy3337 177 IAKDGKAFVWNSKN-GSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANP----------------------- 232 (297)
Q Consensus 177 ~~~d~~v~lwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~----------------------- 232 (297)
.+ +..|+-|++.. ..+.+.+..|..... +++-....+++.+.++.++..
T Consensus 123 VT-~taVyHWs~~~~s~P~kvFdR~~~L~~------~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~i 195 (365)
T 2xzh_A 123 VT-DNAVYHWSMEGESQPVKMFDRHSSLAG------CQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPI 195 (365)
T ss_dssp EE-SSEEEEEESSTTCCCEEEEECCGGGTT------CEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEEEEE
T ss_pred Ec-CCcEEEEcccCCCCCceeeecchhccc------ceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccccccee
Confidence 43 34799999863 345555554431110 111111112222221111110
Q ss_pred -----------------------cccccCCCCeEEEEeCCCC---c------eEEEeccC---CC-eEEEEEcCCCCEEE
Q psy3337 233 -----------------------LAQNKRGISYVQQWDVDSG---R------LRLAREMK---ES-LSALAVRDDGRFVA 276 (297)
Q Consensus 233 -----------------------~~~~g~~d~~i~~wd~~~~---~------~~~~~~~~---~~-v~~~~~s~dg~~l~ 276 (297)
+...+...+.+++.++... . .+..+-.+ .. ..++.+|+--..+.
T Consensus 196 eGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviy 275 (365)
T 2xzh_A 196 EGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVF 275 (365)
T ss_dssp CCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEE
T ss_pred eeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEE
Confidence 0001222357777777331 1 11111111 22 67888888777888
Q ss_pred EEecCCCeEEEEEeCCceec
Q psy3337 277 VGTMFTGSVFVYIAFSLQMC 296 (297)
Q Consensus 277 ~~~~~dg~i~vwd~~~~~~~ 296 (297)
.-+. -|.|++||+.|+.++
T Consensus 276 viTK-~G~ihlyDleTgt~i 294 (365)
T 2xzh_A 276 LITK-YGYIHLYDLETGTCI 294 (365)
T ss_dssp EEET-TSEEEEEETTTCCEE
T ss_pred EEeC-CcEEEEEEcccCcEE
Confidence 8888 999999999999875
No 310
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.11 E-value=0.12 Score=40.00 Aligned_cols=139 Identities=9% Similarity=-0.038 Sum_probs=77.4
Q ss_pred cEEEEEEecCCCEEEEEcCCCcEEEEeCCCCeee------EEec--cccCCeeEEEEccCCCEEEEEeCCCcEEEEEcCC
Q psy3337 119 LQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPL------LHIE--AHSKEIDDVDFSISGEQIVSIAKDGKAFVWNSKN 190 (297)
Q Consensus 119 ~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~------~~~~--~~~~~v~~~~~sp~~~~l~s~~~d~~v~lwd~~~ 190 (297)
.+..++|+|+|.+.+. .+|.++-.+..+.... ..+- +-. ...++.|.|+|.+.++ .||.|+-++..+
T Consensus 42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~-~F~a~~fD~~G~LYav--~dG~iyr~~pP~ 116 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWN-QFQFLFFDPNGYLYAV--SKDKLYKASPPQ 116 (236)
T ss_dssp TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGG-GCSEEEECTTSCEEEE--ETTEEEEESCCC
T ss_pred cceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccc-cceEEEECCCCCEEEe--CCCEEEEeCCCc
Confidence 5679999999986666 6777766665442211 1110 111 1478999999988777 569888877543
Q ss_pred CceeeeeeccCCCCceEEEEe---eeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCCCc------eEEEec-cC
Q psy3337 191 GSLSKELKWNTPDNIKYLFKR---CRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSGR------LRLARE-MK 260 (297)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~------~~~~~~-~~ 260 (297)
...-.-+.. ...+.. ..+..|.+.|+|...+.. ++.++-+...++. ....+- ..
T Consensus 117 ~~~~~Wl~~------a~~vg~~gw~~~~~lff~p~G~Lyav~----------dg~lyr~~~P~~~~~~wl~~~~~~g~~g 180 (236)
T 1tl2_A 117 SDTDNWIAR------ATEVGSGGWSGFKFLFFHPNGYLYAVH----------GQQFYKALPPVSNQDNWLARATKIGQGG 180 (236)
T ss_dssp STTCCHHHH------SEEEECSSGGGEEEEEECTTSCEEEEE----------TTEEEEECCCSSTTCCHHHHCEEEESSS
T ss_pred CCCCceecc------ccEeccCCCCceEEEEECCCceEEEEe----------CCcEEecCCCCCCCcccccccceeccCC
Confidence 211111100 001100 134457889999866553 4566554444322 111221 12
Q ss_pred CC-eEEEEEcCCCCEEEEE
Q psy3337 261 ES-LSALAVRDDGRFVAVG 278 (297)
Q Consensus 261 ~~-v~~~~~s~dg~~l~~~ 278 (297)
.. -+-+.|+++|.+.++.
T Consensus 181 ~~~yr~l~f~~~G~l~~v~ 199 (236)
T 1tl2_A 181 WDTFKFLFFSSVGTLFGVQ 199 (236)
T ss_dssp GGGEEEEEECTTSCEEEEE
T ss_pred cceEEEEEECCCCcEEEEe
Confidence 22 4557788888877665
No 311
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=95.81 E-value=0.64 Score=38.27 Aligned_cols=145 Identities=14% Similarity=0.100 Sum_probs=78.8
Q ss_pred CCcEEEEEEecCCCEEEEEcCCCcEE-EEeCCCCeee-EEeccccCCeeEEEEccCCCEEEEEeCCCcEEEEEcCCCcee
Q psy3337 117 ESLQRVVRLSRNGDLMVTGGTDGHLR-LWSFPKMKPL-LHIEAHSKEIDDVDFSISGEQIVSIAKDGKAFVWNSKNGSLS 194 (297)
Q Consensus 117 ~~~v~~~~~s~~g~~l~s~~~d~~i~-iwd~~~~~~~-~~~~~~~~~v~~~~~sp~~~~l~s~~~d~~v~lwd~~~~~~~ 194 (297)
...+..+.+.+++..++.+. ++.|. -.| .++.- .....+...+..+.+.|++.+++.+...+..+-+|- .+..-
T Consensus 121 ~~~~~~i~~~~~~~~~~~~~-~g~v~~S~D--gG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~-gG~tW 196 (327)
T 2xbg_A 121 PGSPRLIKALGNGSAEMITN-VGAIYRTKD--SGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEP-GQTAW 196 (327)
T ss_dssp SSCEEEEEEEETTEEEEEET-TCCEEEESS--TTSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSEEEEECT-TCSSC
T ss_pred CCCeEEEEEECCCCEEEEeC-CccEEEEcC--CCCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCC-CCCce
Confidence 34577888887777666654 55543 233 23221 112234557889999999888776654443333442 12222
Q ss_pred eeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCCCceEEEecc-----CCCeEEEEEc
Q psy3337 195 KELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSGRLRLAREM-----KESLSALAVR 269 (297)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~-----~~~v~~~~~s 269 (297)
..+....+ ..+..+.+.+++..++. .. ++.+++.+...++.-..+.. ...+.++.+.
T Consensus 197 ~~~~~~~~---------~~~~~~~~~~~g~~~~~-~~--------~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~ 258 (327)
T 2xbg_A 197 EPHNRTTS---------RRLHNMGFTPDGRLWMI-VN--------GGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYR 258 (327)
T ss_dssp EEEECCSS---------SCEEEEEECTTSCEEEE-ET--------TTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEES
T ss_pred eECCCCCC---------CccceeEECCCCCEEEE-eC--------CceEEEecCCCCCeeEeccCCcccCCcceEEEEec
Confidence 22211111 12234667888865544 22 56777664333433333221 1238899999
Q ss_pred CCCCEEEEEecCCCeE
Q psy3337 270 DDGRFVAVGTMFTGSV 285 (297)
Q Consensus 270 ~dg~~l~~~~~~dg~i 285 (297)
+++..++++. +|.|
T Consensus 259 ~~~~~~~~g~--~g~i 272 (327)
T 2xbg_A 259 TPNEVWLAGG--AGAL 272 (327)
T ss_dssp SSSCEEEEES--TTCE
T ss_pred CCCEEEEEeC--CCeE
Confidence 8888777665 5665
No 312
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=95.79 E-value=0.072 Score=44.34 Aligned_cols=148 Identities=11% Similarity=0.144 Sum_probs=81.5
Q ss_pred CEEEEEcCCCcEEEEeCCCCeeeEEecccc-CCeeEEEE--cc-CCCEEEEE-eCCCcEEEEEcCCCceeeeeeccCCCC
Q psy3337 130 DLMVTGGTDGHLRLWSFPKMKPLLHIEAHS-KEIDDVDF--SI-SGEQIVSI-AKDGKAFVWNSKNGSLSKELKWNTPDN 204 (297)
Q Consensus 130 ~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~v~~~~~--sp-~~~~l~s~-~~d~~v~lwd~~~~~~~~~~~~~~~~~ 204 (297)
..++.++.||.|.-+|..+|+.+..+.... .++....- .+ ++..++.. +.||.|+.++..+|.....+.......
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 368888999999999999999998886541 22221110 01 22333333 589999999998885544333221000
Q ss_pred c-eEEEEeeeeeeeeeC----CCCeEEEEeccCcccccCCCCeEEEEeCCCCceEEEeccCCC--------eEEEEEc--
Q psy3337 205 I-KYLFKRCRYGLVEDS----PKRSRLFTLANPLAQNKRGISYVQQWDVDSGRLRLAREMKES--------LSALAVR-- 269 (297)
Q Consensus 205 ~-~~~~~~~~~~~~~~s----~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~--------v~~~~~s-- 269 (297)
. .+...... +... ..+..+++ |+.++.+...|+.+|+.+..+..... ..|....
T Consensus 91 ~SP~~~~~~p---vv~~~~~~~~~g~Vy~--------Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~ 159 (339)
T 2be1_A 91 TSPLHLKTNI---VVNDSGKIVEDEKVYT--------GSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKI 159 (339)
T ss_dssp TCSEEEECC-------------CCEEEEE--------CEEEEEEEEEETTTCCEEEEESTTCBCC---------------
T ss_pred ccccccCCCc---eeecccccccCCEEEE--------EecCCEEEEEECCCCcEEEEEecCCCccccccccccccccccc
Confidence 0 01100000 0000 13445666 55699999999999999988865421 0111111
Q ss_pred ---CCCCEEEEEecCCCeEEEEE
Q psy3337 270 ---DDGRFVAVGTMFTGSVFVYI 289 (297)
Q Consensus 270 ---~dg~~l~~~~~~dg~i~vwd 289 (297)
..+..|+.+.. +..+.+.+
T Consensus 160 ~~d~~~~~v~ig~~-~y~v~~~~ 181 (339)
T 2be1_A 160 KLQECENMIVIGKT-IFELGIHS 181 (339)
T ss_dssp -----CCEEEEEEE-EEECEECC
T ss_pred ccccCCCeEEEecc-eEEEEEEC
Confidence 12356776666 66666644
No 313
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=95.71 E-value=0.64 Score=37.49 Aligned_cols=149 Identities=13% Similarity=0.078 Sum_probs=73.2
Q ss_pred CCCEEEEEcCC-----CcEEEEeCCCCe--eeEEeccccCCeeEEEEccCCCEEEEEeCC-----CcEEEEEcCCCceee
Q psy3337 128 NGDLMVTGGTD-----GHLRLWSFPKMK--PLLHIEAHSKEIDDVDFSISGEQIVSIAKD-----GKAFVWNSKNGSLSK 195 (297)
Q Consensus 128 ~g~~l~s~~~d-----~~i~iwd~~~~~--~~~~~~~~~~~v~~~~~sp~~~~l~s~~~d-----~~v~lwd~~~~~~~~ 195 (297)
++..++.|+.+ ..+.+||+.+.+ .+..+.........+. -++.+++.|+.+ ..+.+||+.+.+-..
T Consensus 112 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~ 189 (301)
T 2vpj_A 112 GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVV--ASGVIYCLGGYDGLNILNSVEKYDPHTGHWTN 189 (301)
T ss_dssp TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEE--ETTEEEEECCBCSSCBCCCEEEEETTTTEEEE
T ss_pred CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEE--ECCEEEEECCCCCCcccceEEEEeCCCCcEEe
Confidence 67777777654 358889987654 2222221111112222 266677777654 458889987764332
Q ss_pred eeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccC-CCCeEEEEeCCCCceEEE--eccCCCeEEEEEcCCC
Q psy3337 196 ELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKR-GISYVQQWDVDSGRLRLA--REMKESLSALAVRDDG 272 (297)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~-~d~~i~~wd~~~~~~~~~--~~~~~~v~~~~~s~dg 272 (297)
. . ..|..... ...+.+ ++..++..+.. +. ....+.+||+.+.+-... +.....-.+++. -++
T Consensus 190 ~-~-~~p~~r~~------~~~~~~--~~~i~v~GG~~----~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~ 254 (301)
T 2vpj_A 190 V-T-PMATKRSG------AGVALL--NDHIYVVGGFD----GTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATV-LRG 254 (301)
T ss_dssp E-C-CCSSCCBS------CEEEEE--TTEEEEECCBC----SSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETT
T ss_pred C-C-CCCccccc------ceEEEE--CCEEEEEeCCC----CCcccceEEEEeCCCCcEEECCCCCCcccceeEEE-ECC
Confidence 2 1 11111000 001111 34433332210 00 135799999987543222 221111112222 267
Q ss_pred CEEEEEecCC-----CeEEEEEeCCce
Q psy3337 273 RFVAVGTMFT-----GSVFVYIAFSLQ 294 (297)
Q Consensus 273 ~~l~~~~~~d-----g~i~vwd~~~~~ 294 (297)
++++.|+. + ..+.+||+.+.+
T Consensus 255 ~i~v~GG~-~~~~~~~~v~~yd~~~~~ 280 (301)
T 2vpj_A 255 RLYAIAGY-DGNSLLSSIECYDPIIDS 280 (301)
T ss_dssp EEEEECCB-CSSSBEEEEEEEETTTTE
T ss_pred EEEEEcCc-CCCcccccEEEEcCCCCe
Confidence 78788775 5 467888887643
No 314
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=95.70 E-value=0.14 Score=45.32 Aligned_cols=106 Identities=10% Similarity=0.056 Sum_probs=68.9
Q ss_pred CCeeEEEEccCCCEEEEEe-CCCcEEEEEcCCCce-----e----eeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEe
Q psy3337 160 KEIDDVDFSISGEQIVSIA-KDGKAFVWNSKNGSL-----S----KELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTL 229 (297)
Q Consensus 160 ~~v~~~~~sp~~~~l~s~~-~d~~v~lwd~~~~~~-----~----~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~ 229 (297)
.....+.++|||++++.++ .+.++.++|++.-.. + ..+....+.+.. -...+|.++|....++
T Consensus 323 ksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlG-------PlHt~Fd~~G~aYTtl 395 (638)
T 3sbq_A 323 KNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLG-------PLHTTFDGRGNAYTTL 395 (638)
T ss_dssp SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSC-------EEEEEECSSSEEEEEE
T ss_pred CCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCc-------ccEEEECCCCceEeee
Confidence 3456789999999988776 478999999863211 0 001111111101 1136789999655555
Q ss_pred ccCcccccCCCCeEEEEeCCCC----------ceEEEeccCCCeEEEEE------cCCCCEEEEEec
Q psy3337 230 ANPLAQNKRGISYVQQWDVDSG----------RLRLAREMKESLSALAV------RDDGRFVAVGTM 280 (297)
Q Consensus 230 ~~~~~~~g~~d~~i~~wd~~~~----------~~~~~~~~~~~v~~~~~------s~dg~~l~~~~~ 280 (297)
.. |..|..|++... ..+..+..|-.+-.+.- .|||+||++...
T Consensus 396 fi--------dSqvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~lnK 454 (638)
T 3sbq_A 396 FI--------DSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALSK 454 (638)
T ss_dssp TT--------TTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEES
T ss_pred ee--------cceEEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEecc
Confidence 55 899999998753 56777777766555544 578999998764
No 315
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=95.65 E-value=0.67 Score=37.39 Aligned_cols=150 Identities=15% Similarity=0.101 Sum_probs=71.4
Q ss_pred CCCEEEEEcCCC-----cEEEEeCCCCee--eEEeccccCCeeEEEEccCCCEEEEEeCC-------CcEEEEEcCCCce
Q psy3337 128 NGDLMVTGGTDG-----HLRLWSFPKMKP--LLHIEAHSKEIDDVDFSISGEQIVSIAKD-------GKAFVWNSKNGSL 193 (297)
Q Consensus 128 ~g~~l~s~~~d~-----~i~iwd~~~~~~--~~~~~~~~~~v~~~~~sp~~~~l~s~~~d-------~~v~lwd~~~~~~ 193 (297)
++..++.|+.++ .+.+||+.+.+- +..+.........+. -++.+++.|+.+ ..+.+||+.+.+-
T Consensus 108 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W 185 (302)
T 2xn4_A 108 NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGV--VGGLLYAVGGYDVASRQCLSTVECYNATTNEW 185 (302)
T ss_dssp TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCEETTTTEECCCEEEEETTTTEE
T ss_pred CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEE--ECCEEEEEeCCCCCCCccccEEEEEeCCCCcE
Confidence 677777777653 577888876542 222221111111222 256666666542 3588899876643
Q ss_pred eeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCCCceEE--EeccCCCeEEEEEcCC
Q psy3337 194 SKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSGRLRL--AREMKESLSALAVRDD 271 (297)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~~~--~~~~~~~v~~~~~s~d 271 (297)
...- ..|..... ...+.+ ++..++..+.. .......+.+||+.+.+=.. .+.....-.+++. .+
T Consensus 186 ~~~~--~~p~~r~~------~~~~~~--~~~iyv~GG~~---~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~ 251 (302)
T 2xn4_A 186 TYIA--EMSTRRSG------AGVGVL--NNLLYAVGGHD---GPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCA-VN 251 (302)
T ss_dssp EEEC--CCSSCCBS------CEEEEE--TTEEEEECCBS---SSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ET
T ss_pred EECC--CCcccccc------ccEEEE--CCEEEEECCCC---CCcccceEEEEeCCCCCEeeCCCCCCccccCeEEE-EC
Confidence 3221 11111000 000111 34433332210 00113479999998754222 2221111112222 26
Q ss_pred CCEEEEEecCCC-----eEEEEEeCCce
Q psy3337 272 GRFVAVGTMFTG-----SVFVYIAFSLQ 294 (297)
Q Consensus 272 g~~l~~~~~~dg-----~i~vwd~~~~~ 294 (297)
+++++.|+. ++ .+.+||+.+.+
T Consensus 252 ~~i~v~GG~-~~~~~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 252 GLLYVVGGD-DGSCNLASVEYYNPTTDK 278 (302)
T ss_dssp TEEEEECCB-CSSSBCCCEEEEETTTTE
T ss_pred CEEEEECCc-CCCcccccEEEEcCCCCe
Confidence 778888876 53 48999987643
No 316
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=95.61 E-value=0.54 Score=38.38 Aligned_cols=148 Identities=10% Similarity=0.025 Sum_probs=79.4
Q ss_pred CceEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCEEEEEc--C--CCcEEEEeCCCCeeeEEeccccCCeeEEEEccC
Q psy3337 96 EKNLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGG--T--DGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSIS 170 (297)
Q Consensus 96 d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~--~--d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~ 170 (297)
...|+. ++..++... +. .. . +..|++++++|+-.. . ...|+..++. +.....+..+.. .+|+|+
T Consensus 87 ~~~Iy~i~~dg~~~~~-l~-~~--~--~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~d-Gs~~~~lt~~~~----~~~~~~ 155 (302)
T 3s25_A 87 RNSLCRIKRNGHGSTV-LD-PD--P--CIYASLIGNYIYYLHYDTQTATSLYRIRID-GEEKKKIKNHYL----FTCNTS 155 (302)
T ss_dssp SEEEEEEETTSCCCEE-EE-CS--C--EEEEEEETTEEEEEEESSSSCEEEEEEETT-SCCCEEEESSCC----CCSEEE
T ss_pred CCeEEEEeCCCCcceE-ee-cC--C--ccEEEEeCCEEEEEeecCCCCceEEEEECC-CCCeEEEeCCCc----eEeeEE
Confidence 455666 666655332 32 21 1 347888998888765 3 3445555554 333444443432 456778
Q ss_pred CCEEEEEeC-CCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCC
Q psy3337 171 GEQIVSIAK-DGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVD 249 (297)
Q Consensus 171 ~~~l~s~~~-d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~ 249 (297)
++.|+-.+. ...|.+.++..+.....+... .. ..+.|++.+|+.... +. ...|..-++.
T Consensus 156 g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~~~-----~~---------~~~~P~g~~iy~t~~-----~~-~~~I~~~~ld 215 (302)
T 3s25_A 156 DRYFYYNNPKNGQLYRYDTASQSEALFYDCN-----CY---------KPVVLDDTNVYYMDV-----NR-DNAIVHVNIN 215 (302)
T ss_dssp TTEEEEECTTTCCEEEEETTTTEEEEEECSC-----EE---------EEEEEETTEEEEEEG-----GG-TTEEEEECSS
T ss_pred CCEEEEEeCCCceEEEEECCCCCEEEEeCCC-----cc---------ceeeecCCEEEEEEc-----CC-CcEEEEEECC
Confidence 888886655 577888887655433222210 11 123577877777654 11 2467666766
Q ss_pred CCceEEEeccCCCeEEEEEcCCCCEEEEE
Q psy3337 250 SGRLRLAREMKESLSALAVRDDGRFVAVG 278 (297)
Q Consensus 250 ~~~~~~~~~~~~~v~~~~~s~dg~~l~~~ 278 (297)
.... ..+.. ..+ ..|+|++.+|..+
T Consensus 216 G~~~-~~Lt~-~~~--~~~~~~g~~Iy~~ 240 (302)
T 3s25_A 216 NPNP-VVLTE-ANI--EHYNVYGSLIFYQ 240 (302)
T ss_dssp SCCC-EECSC-SCE--EEEEEETTEEEEE
T ss_pred CCCe-EEEeC-CCc--ceEEECCCEEEEE
Confidence 5432 22221 123 2366667766654
No 317
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=95.52 E-value=0.77 Score=37.13 Aligned_cols=149 Identities=11% Similarity=0.043 Sum_probs=73.6
Q ss_pred cCCCEEEEEcCC----CcEEEEeCCCCee--eEEeccccCCeeEEEEccCCCEEEEEeCC------CcEEEEEcCCCcee
Q psy3337 127 RNGDLMVTGGTD----GHLRLWSFPKMKP--LLHIEAHSKEIDDVDFSISGEQIVSIAKD------GKAFVWNSKNGSLS 194 (297)
Q Consensus 127 ~~g~~l~s~~~d----~~i~iwd~~~~~~--~~~~~~~~~~v~~~~~sp~~~~l~s~~~d------~~v~lwd~~~~~~~ 194 (297)
.++.+++.|+.+ ..+.+||+.+.+- +..+.........+.+ ++.+++.|+.+ ..+.+||+.+.+-.
T Consensus 54 ~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~ 131 (306)
T 3ii7_A 54 WDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWH 131 (306)
T ss_dssp ETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEE
T ss_pred ECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceE
Confidence 366777787755 5788899877642 2222211111122222 56677777654 45889998876433
Q ss_pred eeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccC-C----CCeEEEEeCCCCceE--EEeccCCCeEEEE
Q psy3337 195 KELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKR-G----ISYVQQWDVDSGRLR--LAREMKESLSALA 267 (297)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~-~----d~~i~~wd~~~~~~~--~~~~~~~~v~~~~ 267 (297)
..- ..|.... . ...+. -+++.++..+. .+. . ...+.+||+.+.+=. ..+.....-.+++
T Consensus 132 ~~~--~~p~~r~-~-----~~~~~--~~~~iyv~GG~----~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~ 197 (306)
T 3ii7_A 132 TKP--SMLTQRC-S-----HGMVE--ANGLIYVCGGS----LGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLV 197 (306)
T ss_dssp EEC--CCSSCCB-S-----CEEEE--ETTEEEEECCE----ESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEE
T ss_pred eCC--CCcCCcc-e-----eEEEE--ECCEEEEECCC----CCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEE
Confidence 221 1111100 0 00011 13443333221 011 1 456899999875422 2222111112222
Q ss_pred EcCCCCEEEEEecCC-----CeEEEEEeCCc
Q psy3337 268 VRDDGRFVAVGTMFT-----GSVFVYIAFSL 293 (297)
Q Consensus 268 ~s~dg~~l~~~~~~d-----g~i~vwd~~~~ 293 (297)
.. ++++++.|+. + ..+.+||+.+.
T Consensus 198 ~~-~~~i~v~GG~-~~~~~~~~~~~yd~~~~ 226 (306)
T 3ii7_A 198 FV-KDKIFAVGGQ-NGLGGLDNVEYYDIKLN 226 (306)
T ss_dssp EE-TTEEEEECCE-ETTEEBCCEEEEETTTT
T ss_pred EE-CCEEEEEeCC-CCCCCCceEEEeeCCCC
Confidence 22 6677777764 4 35888888764
No 318
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=95.40 E-value=1.2 Score=38.42 Aligned_cols=184 Identities=8% Similarity=0.052 Sum_probs=105.2
Q ss_pred eEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCeeeEEeccccCCeeEEEEccCCCEEEE
Q psy3337 98 NLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVS 176 (297)
Q Consensus 98 ~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s 176 (297)
.+.+ |+.++..+.... -.+. +.-.+|..+.+|--. ..++.|||+++...+..+.- ...|.-..|-.+. .|+.
T Consensus 49 ~vvIiDl~~~~~~~rrp--i~Ad--sAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~-~e~VvfWkWis~~-~l~l 121 (494)
T 1bpo_A 49 QVVIIDMNDPSNPIRRP--ISAD--SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLN-TVAL 121 (494)
T ss_dssp EEEEEETTSTTSCEEEE--CCCS--EEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEEC-SSCCCEEEEEETT-EEEE
T ss_pred eEEEEECCCCCcceecc--cccc--eeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceec-CCCceEEEecCCC-eEEE
Confidence 5555 776655443322 1111 556788888777654 67899999999888877764 3467788886543 4544
Q ss_pred EeCCCcEEEEEcCC-CceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccC-----------------------
Q psy3337 177 IAKDGKAFVWNSKN-GSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANP----------------------- 232 (297)
Q Consensus 177 ~~~d~~v~lwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~----------------------- 232 (297)
.+ +..|+-|++.. ..+.+.+..|.... .+++-....+++.++++.++..
T Consensus 122 VT-~taVyHWsi~~~s~P~kvFdR~~~L~------~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~i 194 (494)
T 1bpo_A 122 VT-DNAVYHWSMEGESQPVKMFDRHSSLA------GCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPI 194 (494)
T ss_dssp EC-SSEEEEEESSSSCCCEEEEECCGGGT------TCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCEEEE
T ss_pred Ec-CCeeEEecccCCCCchhheecchhcc------cceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccccchh
Confidence 43 45799999863 34555555443111 0111112223333322222110
Q ss_pred -----------------------cccccCCCCeEEEEeCCCC---------ceEEEeccC---CC-eEEEEEcCCCCEEE
Q psy3337 233 -----------------------LAQNKRGISYVQQWDVDSG---------RLRLAREMK---ES-LSALAVRDDGRFVA 276 (297)
Q Consensus 233 -----------------------~~~~g~~d~~i~~wd~~~~---------~~~~~~~~~---~~-v~~~~~s~dg~~l~ 276 (297)
+.......+.+++.++... +.+..+-.+ .. ..++.+|+.-..+.
T Consensus 195 eGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviy 274 (494)
T 1bpo_A 195 EGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVF 274 (494)
T ss_dssp CCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEE
T ss_pred eeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEE
Confidence 0001222367777776431 111111111 22 67888888878888
Q ss_pred EEecCCCeEEEEEeCCceec
Q psy3337 277 VGTMFTGSVFVYIAFSLQMC 296 (297)
Q Consensus 277 ~~~~~dg~i~vwd~~~~~~~ 296 (297)
.-+. -|.|++||+.|+.++
T Consensus 275 viTK-~G~i~lyDleTgt~i 293 (494)
T 1bpo_A 275 LITK-YGYIHLYDLETGTCI 293 (494)
T ss_dssp EEET-TSEEEEEETTTCCEE
T ss_pred EEec-CceEEEEecccceee
Confidence 8888 999999999999865
No 319
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=95.40 E-value=0.39 Score=40.04 Aligned_cols=117 Identities=9% Similarity=-0.073 Sum_probs=62.8
Q ss_pred EeccccCCeeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCC---CeEEEEec
Q psy3337 154 HIEAHSKEIDDVDFSISGEQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPK---RSRLFTLA 230 (297)
Q Consensus 154 ~~~~~~~~v~~~~~sp~~~~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~---~~~l~~~~ 230 (297)
.+...-...+.|+|.|+|++|++--..|.|++++...+.......... ...........|+++|+ ...|+...
T Consensus 26 ~va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~----v~~~g~~GllGia~~Pdf~~~g~lYv~y 101 (347)
T 3das_A 26 TVATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPG----VSPSGEGGLLGIALSPDYASDHMVYAYF 101 (347)
T ss_dssp EEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTT----CCCBTTBSEEEEEECTTHHHHCEEEEEE
T ss_pred EeecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCc----eeecCCCCceeeEeccccccCCEEEEEE
Confidence 333334567899999999977776558999999876554321111110 00000011234788985 34444432
Q ss_pred cCcccccCCCCeEEEEeCCCC----------ce-EEEeccCC--CeEEEEEcCCCCEEEEEe
Q psy3337 231 NPLAQNKRGISYVQQWDVDSG----------RL-RLAREMKE--SLSALAVRDDGRFVAVGT 279 (297)
Q Consensus 231 ~~~~~~g~~d~~i~~wd~~~~----------~~-~~~~~~~~--~v~~~~~s~dg~~l~~~~ 279 (297)
. ...+..|.-|.+..+ +. +..+.... ....|.|.|||.+.++.+
T Consensus 102 t-----~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~G 158 (347)
T 3das_A 102 T-----SASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTG 158 (347)
T ss_dssp E-----CSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECB
T ss_pred e-----cCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEEC
Confidence 1 122456666665431 11 12232211 156799999998766643
No 320
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=95.00 E-value=1.1 Score=36.01 Aligned_cols=151 Identities=15% Similarity=0.103 Sum_probs=73.3
Q ss_pred cCCCEEEEEcCC-----CcEEEEeCCCCe-----eeEEeccccCCeeEEEEccCCCEEEEEeCC-----CcEEEEEcCCC
Q psy3337 127 RNGDLMVTGGTD-----GHLRLWSFPKMK-----PLLHIEAHSKEIDDVDFSISGEQIVSIAKD-----GKAFVWNSKNG 191 (297)
Q Consensus 127 ~~g~~l~s~~~d-----~~i~iwd~~~~~-----~~~~~~~~~~~v~~~~~sp~~~~l~s~~~d-----~~v~lwd~~~~ 191 (297)
.++..++.|+.+ ..+.+||+.+.+ .+..+.........+.+ ++.+++.|+.+ ..+.+||+.+.
T Consensus 61 ~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~ 138 (301)
T 2vpj_A 61 LHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNID 138 (301)
T ss_dssp ETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTT
T ss_pred ECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCC
Confidence 366777777755 468899987654 22222211111122222 56666666643 35888998766
Q ss_pred ceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCCCceEEE--eccCCCeEEEEEc
Q psy3337 192 SLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSGRLRLA--REMKESLSALAVR 269 (297)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~--~~~~~~v~~~~~s 269 (297)
+-...-..+.+.. . ...+.. +++.++..+.. .......+.+||+.+.+=... +.....-.+++.
T Consensus 139 ~W~~~~~~p~~r~-~-------~~~~~~--~~~iyv~GG~~---~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~- 204 (301)
T 2vpj_A 139 QWSMLGDMQTARE-G-------AGLVVA--SGVIYCLGGYD---GLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVAL- 204 (301)
T ss_dssp EEEEEEECSSCCB-S-------CEEEEE--TTEEEEECCBC---SSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-
T ss_pred eEEECCCCCCCcc-c-------ceEEEE--CCEEEEECCCC---CCcccceEEEEeCCCCcEEeCCCCCcccccceEEE-
Confidence 4332211111110 0 000111 44433332210 001135789999887543222 221111112222
Q ss_pred CCCCEEEEEecCC-----CeEEEEEeCCce
Q psy3337 270 DDGRFVAVGTMFT-----GSVFVYIAFSLQ 294 (297)
Q Consensus 270 ~dg~~l~~~~~~d-----g~i~vwd~~~~~ 294 (297)
-++++++.|+. + ..+.+||+.+.+
T Consensus 205 ~~~~i~v~GG~-~~~~~~~~v~~yd~~~~~ 233 (301)
T 2vpj_A 205 LNDHIYVVGGF-DGTAHLSSVEAYNIRTDS 233 (301)
T ss_dssp ETTEEEEECCB-CSSSBCCCEEEEETTTTE
T ss_pred ECCEEEEEeCC-CCCcccceEEEEeCCCCc
Confidence 26777777775 4 358899987653
No 321
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=94.84 E-value=1.5 Score=36.57 Aligned_cols=62 Identities=13% Similarity=-0.018 Sum_probs=36.6
Q ss_pred CCcEEEEEEecC---CCEEEEEcC-C-----CcEEEEeCCCCe-----ee-EEec---cccCCeeEEEEccCCCEEEEEe
Q psy3337 117 ESLQRVVRLSRN---GDLMVTGGT-D-----GHLRLWSFPKMK-----PL-LHIE---AHSKEIDDVDFSISGEQIVSIA 178 (297)
Q Consensus 117 ~~~v~~~~~s~~---g~~l~s~~~-d-----~~i~iwd~~~~~-----~~-~~~~---~~~~~v~~~~~sp~~~~l~s~~ 178 (297)
......++|+|+ +..|..+.. . +.|..|+...+. .+ ..+. ........++|.|+|.++++.+
T Consensus 74 ~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 74 ESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp TCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred CCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 345789999998 545544332 2 567778776431 11 1233 1112346899999997666543
No 322
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=94.79 E-value=1.4 Score=35.97 Aligned_cols=140 Identities=9% Similarity=0.001 Sum_probs=80.2
Q ss_pred EEEEecCCCEEEEEcCC--------------CcEEEEeCCCCeeeEEeccccCCeeEEEEccCCCEEEEEe--CC--CcE
Q psy3337 122 VVRLSRNGDLMVTGGTD--------------GHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIA--KD--GKA 183 (297)
Q Consensus 122 ~~~~s~~g~~l~s~~~d--------------~~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~--~d--~~v 183 (297)
+--++++|.+|+.+... ..|+..++...+.. .+.. .. +..|++++..|+-.. .+ ..|
T Consensus 57 ~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~-~l~~--~~--~~~~s~~g~~Iy~~~~~~~~~~~I 131 (302)
T 3s25_A 57 AMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGST-VLDP--DP--CIYASLIGNYIYYLHYDTQTATSL 131 (302)
T ss_dssp EEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCE-EEEC--SC--EEEEEEETTEEEEEEESSSSCEEE
T ss_pred eeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcce-Eeec--CC--ccEEEEeCCEEEEEeecCCCCceE
Confidence 34568899988876543 35666676655432 2221 11 236788888888765 33 445
Q ss_pred EEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCCCceEEEeccCCCe
Q psy3337 184 FVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSGRLRLAREMKESL 263 (297)
Q Consensus 184 ~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~v 263 (297)
+..++. |.....+..+. . .+++|+++.|+.... ....|.+.++..+.....+.+ ..
T Consensus 132 y~~~~d-Gs~~~~lt~~~----~----------~~~~~~g~~iy~t~~-------g~~~Iy~~~l~g~~~~~l~~~--~~ 187 (302)
T 3s25_A 132 YRIRID-GEEKKKIKNHY----L----------FTCNTSDRYFYYNNP-------KNGQLYRYDTASQSEALFYDC--NC 187 (302)
T ss_dssp EEEETT-SCCCEEEESSC----C----------CCSEEETTEEEEECT-------TTCCEEEEETTTTEEEEEECS--CE
T ss_pred EEEECC-CCCeEEEeCCC----c----------eEeeEECCEEEEEeC-------CCceEEEEECCCCCEEEEeCC--Cc
Confidence 555654 33333333221 0 235777888887542 357899999886654444432 22
Q ss_pred EEEEEcCCCCEEEEEecCCC--eEEEEEeCC
Q psy3337 264 SALAVRDDGRFVAVGTMFTG--SVFVYIAFS 292 (297)
Q Consensus 264 ~~~~~s~dg~~l~~~~~~dg--~i~vwd~~~ 292 (297)
. ..++|++.+|+.... ++ .|..-++..
T Consensus 188 ~-~~~~P~g~~iy~t~~-~~~~~I~~~~ldG 216 (302)
T 3s25_A 188 Y-KPVVLDDTNVYYMDV-NRDNAIVHVNINN 216 (302)
T ss_dssp E-EEEEEETTEEEEEEG-GGTTEEEEECSSS
T ss_pred c-ceeeecCCEEEEEEc-CCCcEEEEEECCC
Confidence 2 235699998887765 43 455555543
No 323
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=94.73 E-value=1.3 Score=35.65 Aligned_cols=149 Identities=13% Similarity=0.101 Sum_probs=72.1
Q ss_pred CCCEEEEEcCC------CcEEEEeCCCCee--eEEeccccCCeeEEEEccCCCEEEEEeC---------CCcEEEEEcCC
Q psy3337 128 NGDLMVTGGTD------GHLRLWSFPKMKP--LLHIEAHSKEIDDVDFSISGEQIVSIAK---------DGKAFVWNSKN 190 (297)
Q Consensus 128 ~g~~l~s~~~d------~~i~iwd~~~~~~--~~~~~~~~~~v~~~~~sp~~~~l~s~~~---------d~~v~lwd~~~ 190 (297)
++++++.|+.+ ..+.+||+.+.+- +..+.........+. -++.+++.|+. -..+.+||+.+
T Consensus 101 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~ 178 (306)
T 3ii7_A 101 EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVE--ANGLIYVCGGSLGNNVSGRVLNSCEVYDPAT 178 (306)
T ss_dssp TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCEESCTTTCEECCCEEEEETTT
T ss_pred CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEE--ECCEEEEECCCCCCCCcccccceEEEeCCCC
Confidence 67777787765 4688999877642 212221111111222 25666666653 34588999877
Q ss_pred CceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCCCce--EEEeccCCC-eEEEE
Q psy3337 191 GSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSGRL--RLAREMKES-LSALA 267 (297)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~--~~~~~~~~~-v~~~~ 267 (297)
.+-... . ..|.... . ...+.. +++.++..+.. ....-..+.+||+.+.+= +..+..... ...+.
T Consensus 179 ~~W~~~-~-~~p~~r~-~-----~~~~~~--~~~i~v~GG~~---~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~ 245 (306)
T 3ii7_A 179 ETWTEL-C-PMIEARK-N-----HGLVFV--KDKIFAVGGQN---GLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAA 245 (306)
T ss_dssp TEEEEE-C-CCSSCCB-S-----CEEEEE--TTEEEEECCEE---TTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEE
T ss_pred CeEEEC-C-Cccchhh-c-----ceEEEE--CCEEEEEeCCC---CCCCCceEEEeeCCCCcEEECCCCCCCccceeEEE
Confidence 643222 1 1111100 0 001111 34433332110 000124689999987532 222222111 22333
Q ss_pred EcCCCCEEEEEecCC-----CeEEEEEeCCce
Q psy3337 268 VRDDGRFVAVGTMFT-----GSVFVYIAFSLQ 294 (297)
Q Consensus 268 ~s~dg~~l~~~~~~d-----g~i~vwd~~~~~ 294 (297)
+ ++++++.|+. + ..+.+||+.+.+
T Consensus 246 ~--~~~i~v~GG~-~~~~~~~~~~~yd~~~~~ 274 (306)
T 3ii7_A 246 V--GSIVYVLAGF-QGVGRLGHILEYNTETDK 274 (306)
T ss_dssp E--TTEEEEEECB-CSSSBCCEEEEEETTTTE
T ss_pred E--CCEEEEEeCc-CCCeeeeeEEEEcCCCCe
Confidence 3 6778888874 4 568899987643
No 324
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=94.73 E-value=1.5 Score=36.21 Aligned_cols=159 Identities=12% Similarity=0.165 Sum_probs=90.5
Q ss_pred CcEEEEEEecCCCEEEEEc-------CCCcEEEEeCCCCeeeEEeccccCCeeEEEEccC---CCEEEEEeC---CCcEE
Q psy3337 118 SLQRVVRLSRNGDLMVTGG-------TDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSIS---GEQIVSIAK---DGKAF 184 (297)
Q Consensus 118 ~~v~~~~~s~~g~~l~s~~-------~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~---~~~l~s~~~---d~~v~ 184 (297)
..|..-..+++.++++..+ -.|.+.+|..+.+ .-+.+.+|......+.+..+ ..+|+.+.. .+.++
T Consensus 152 ~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLh 230 (365)
T 2xzh_A 152 CQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLH 230 (365)
T ss_dssp CEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT-EEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEE
T ss_pred ceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccc-ccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEE
Confidence 3455666777888776543 2367888987654 34567777655444433221 123443332 25788
Q ss_pred EEEcCCC---cee-----eeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCCCceEEE
Q psy3337 185 VWNSKNG---SLS-----KELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSGRLRLA 256 (297)
Q Consensus 185 lwd~~~~---~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~ 256 (297)
+.++... ... ..+..+......+.+ .+..++.-..++.+.. -|.|++||+.++.++..
T Consensus 231 IiEi~~~~~~~~~f~kk~vdi~fppea~~DFPV------amqvs~kygviyviTK--------~G~ihlyDleTgt~i~~ 296 (365)
T 2xzh_A 231 IIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPV------AMQISEKHDVVFLITK--------YGYIHLYDLETGTCIYM 296 (365)
T ss_dssp EEECSSCCTTCCCCCCEEEEECCCTTCTTCCEE------EEEEETTTTEEEEEET--------TSEEEEEETTTCCEEEE
T ss_pred EEEcCCCCCCCCCcccccceeeCCccccCCceE------EEEecccCCEEEEEeC--------CcEEEEEEcccCcEEEE
Confidence 8887432 111 111111111112222 2455666666777665 89999999999999887
Q ss_pred eccCCC-eEEEEEcCCCCEEEEEecCCCeEEEEEeCC
Q psy3337 257 REMKES-LSALAVRDDGRFVAVGTMFTGSVFVYIAFS 292 (297)
Q Consensus 257 ~~~~~~-v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~ 292 (297)
-+-... |...+-+.+..-++.... .|.|.--.+..
T Consensus 297 nrIS~d~iF~ta~~~~~~Gi~~Vnr-~GqVl~v~v~~ 332 (365)
T 2xzh_A 297 NRISGETIFVTAPHEATAGIIGVNR-KGQVLSVCVEE 332 (365)
T ss_dssp EECCSSCEEEEEEEGGGTEEEEEET-TCEEEEEEECT
T ss_pred eccCCCceEEecccCCCCcEEEEcC-CCEEEEEEECc
Confidence 665444 555555444444444446 78777666544
No 325
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=94.59 E-value=1.2 Score=44.27 Aligned_cols=73 Identities=5% Similarity=0.170 Sum_probs=47.4
Q ss_pred EEEEecCCCEEEEEcCCCcEEEEeCCCCeeeEEeccccCCeeEEEEccCCCEEEEEeCCCcEEEEEcCC-Cceeeeee
Q psy3337 122 VVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAKDGKAFVWNSKN-GSLSKELK 198 (297)
Q Consensus 122 ~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~d~~v~lwd~~~-~~~~~~~~ 198 (297)
+.-.+|..+.+|--. ..++.|||+++...+..+.- ...|.-..|-.+. .|+..+ +..|+-|++.. ..+...+.
T Consensus 70 sAIMnP~~~iiALra-g~~lQiFnl~~k~klks~~~-~e~VvfWkWis~~-~l~lVT-~~aVyHW~~~~~s~P~k~fd 143 (1630)
T 1xi4_A 70 SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLN-TVALVT-DNAVYHWSMEGESQPVKMFD 143 (1630)
T ss_pred hhccCCCcceEEEec-CCeEEEeehHHhhhhccccc-CCCceEEEecCCC-eeEEEc-CCeEEEeccCCCCccHHHHh
Confidence 445678777776654 67899999988777666653 3467788886543 344332 35799999963 23433343
No 326
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=94.31 E-value=0.29 Score=40.69 Aligned_cols=109 Identities=12% Similarity=0.175 Sum_probs=66.8
Q ss_pred CEEEEEeCCCcEEEEEcCCCceeeeeecc--CCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCC
Q psy3337 172 EQIVSIAKDGKAFVWNSKNGSLSKELKWN--TPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVD 249 (297)
Q Consensus 172 ~~l~s~~~d~~v~lwd~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~ 249 (297)
.+++.++.||.|+-+|..+|+.+-.+... .|. ..... -....++..++.. ...||.|+.++..
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~----~~~~~----~~~~~~~~~~vv~-------p~~dG~l~a~~~~ 75 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPL----IEIQE----PSRLETYETLIIE-------PFGDGNIYYFNAH 75 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCS----EECCC----SCTTTSSEEEEEC-------CSTTTEEEEEETT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCc----EEecC----CccccCCcEEEEE-------ECCCCEEEEEECC
Confidence 36888999999999999999988887654 111 11000 0001122322221 1358999999998
Q ss_pred CCceEEEeccCCCe--EEEEEc-----------CCCCEEEEEecCCCeEEEEEeCCceec
Q psy3337 250 SGRLRLAREMKESL--SALAVR-----------DDGRFVAVGTMFTGSVFVYIAFSLQMC 296 (297)
Q Consensus 250 ~~~~~~~~~~~~~v--~~~~~s-----------~dg~~l~~~~~~dg~i~vwd~~~~~~~ 296 (297)
+|.....+....-+ .-+... ..+..+++|+. +|.+...|+.+|+.+
T Consensus 76 ~G~~~~~~~~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~-~g~l~ald~~tG~~~ 134 (339)
T 2be1_A 76 QGLQKLPLSIRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSM-RTIMYTINMLNGEII 134 (339)
T ss_dssp TEEEEEEEEHHHHHTTCSEEEECC----------CCEEEEECEE-EEEEEEEETTTCCEE
T ss_pred CCcEEeeeccccceeccccccCCCceeecccccccCCEEEEEec-CCEEEEEECCCCcEE
Confidence 87555443322111 001111 14567888998 999999999999875
No 327
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=94.24 E-value=1.8 Score=35.02 Aligned_cols=150 Identities=11% Similarity=0.103 Sum_probs=72.1
Q ss_pred CCCEEEEEcCC-----CcEEEEeCCCCee--eEEeccccCCeeEEEEccCCCEEEEEeCC-----CcEEEEEcCCCceee
Q psy3337 128 NGDLMVTGGTD-----GHLRLWSFPKMKP--LLHIEAHSKEIDDVDFSISGEQIVSIAKD-----GKAFVWNSKNGSLSK 195 (297)
Q Consensus 128 ~g~~l~s~~~d-----~~i~iwd~~~~~~--~~~~~~~~~~v~~~~~sp~~~~l~s~~~d-----~~v~lwd~~~~~~~~ 195 (297)
++++++.|+.+ ..+.+||+.+.+- +..+.........+.+ ++.+++.|+.+ ..+.+||+.+.+-..
T Consensus 121 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 198 (308)
T 1zgk_A 121 DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRM 198 (308)
T ss_dssp TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEE
T ss_pred CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEee
Confidence 66777777643 3688899876542 2122211111122222 56666776654 458889987654322
Q ss_pred eeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCCCceEEE--eccCCCeEEEEEcCCCC
Q psy3337 196 ELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSGRLRLA--REMKESLSALAVRDDGR 273 (297)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~--~~~~~~v~~~~~s~dg~ 273 (297)
. . ..|.. ... ...+.+ ++..++..+.. .......+.+||+.+.+=... +.....-.+++. -+++
T Consensus 199 ~-~-~~p~~-r~~-----~~~~~~--~~~iyv~GG~~---~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~ 264 (308)
T 1zgk_A 199 I-T-AMNTI-RSG-----AGVCVL--HNCIYAAGGYD---GQDQLNSVERYDVETETWTFVAPMKHRRSALGITV-HQGR 264 (308)
T ss_dssp C-C-CCSSC-CBS-----CEEEEE--TTEEEEECCBC---SSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTE
T ss_pred C-C-CCCCc-ccc-----ceEEEE--CCEEEEEeCCC---CCCccceEEEEeCCCCcEEECCCCCCCccceEEEE-ECCE
Confidence 1 1 11111 000 001112 34433332210 001135799999987542222 221111122222 2677
Q ss_pred EEEEEecCC-----CeEEEEEeCCce
Q psy3337 274 FVAVGTMFT-----GSVFVYIAFSLQ 294 (297)
Q Consensus 274 ~l~~~~~~d-----g~i~vwd~~~~~ 294 (297)
+++.|+. + ..+.+||+.+.+
T Consensus 265 i~v~GG~-~~~~~~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 265 IYVLGGY-DGHTFLDSVECYDPDTDT 289 (308)
T ss_dssp EEEECCB-CSSCBCCEEEEEETTTTE
T ss_pred EEEEcCc-CCCcccceEEEEcCCCCE
Confidence 8888775 4 457889887653
No 328
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=93.61 E-value=3.3 Score=35.87 Aligned_cols=115 Identities=8% Similarity=0.046 Sum_probs=59.9
Q ss_pred cCCeeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeeccC----CCCceEEEEeeeeeeeeeCCC---CeEEEEecc
Q psy3337 159 SKEIDDVDFSISGEQIVSIAKDGKAFVWNSKNGSLSKELKWNT----PDNIKYLFKRCRYGLVEDSPK---RSRLFTLAN 231 (297)
Q Consensus 159 ~~~v~~~~~sp~~~~l~s~~~d~~v~lwd~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~s~~---~~~l~~~~~ 231 (297)
-...+.|+|.|+|+++++-...+.|++++..++.......... +.+ ......|+++|+ +..|+....
T Consensus 26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g------~~Gllgia~~Pdf~~~g~lYv~~s 99 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADG------QNGLLGFAFHPDFKNNPYIYISGT 99 (454)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTS------SCSEEEEEECTTTTTSCEEEEEEE
T ss_pred CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCC------CCceeEEEECCCcCcCCEEEEEEe
Confidence 3456799999999977765444578888765554322111111 000 011224788996 555655442
Q ss_pred CcccccCC-----CCeEEEEeCCCC-------ceE-EEeccC--CCeEEEEEcCCCCEEEEEe
Q psy3337 232 PLAQNKRG-----ISYVQQWDVDSG-------RLR-LAREMK--ESLSALAVRDDGRFVAVGT 279 (297)
Q Consensus 232 ~~~~~g~~-----d~~i~~wd~~~~-------~~~-~~~~~~--~~v~~~~~s~dg~~l~~~~ 279 (297)
.....+.. ...|..|++..+ +.+ ..+... .....|+|.|||.+.++.+
T Consensus 100 ~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 100 FKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp EECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred ccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 00000000 235666665321 111 122221 1278999999998766644
No 329
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=93.06 E-value=2.9 Score=33.71 Aligned_cols=150 Identities=13% Similarity=0.027 Sum_probs=71.6
Q ss_pred CCCEEEEEcC----C-----CcEEEEeCCCCee--eEEeccccCCeeEEEEccCCCEEEEEeCC-----CcEEEEEcCCC
Q psy3337 128 NGDLMVTGGT----D-----GHLRLWSFPKMKP--LLHIEAHSKEIDDVDFSISGEQIVSIAKD-----GKAFVWNSKNG 191 (297)
Q Consensus 128 ~g~~l~s~~~----d-----~~i~iwd~~~~~~--~~~~~~~~~~v~~~~~sp~~~~l~s~~~d-----~~v~lwd~~~~ 191 (297)
++.+++.|+. + ..+.+||+.+.+- +..+.........+.+ ++.+++.|+.+ ..+.+||+.+.
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~ 147 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERD 147 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTT
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCC
Confidence 6677777775 2 4688899876542 2222211111122222 56666666543 35888898765
Q ss_pred ceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCCCceEEE--eccCCCeEEEEEc
Q psy3337 192 SLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSGRLRLA--REMKESLSALAVR 269 (297)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~--~~~~~~v~~~~~s 269 (297)
+-...-..+.+.. . ...+.+ ++..++..+.. .......+.+||+.+.+=... +.....-.+++..
T Consensus 148 ~W~~~~~~p~~r~-~-------~~~~~~--~~~iyv~GG~~---~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~ 214 (308)
T 1zgk_A 148 EWHLVAPMLTRRI-G-------VGVAVL--NRLLYAVGGFD---GTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL 214 (308)
T ss_dssp EEEECCCCSSCCB-S-------CEEEEE--TTEEEEECCBC---SSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE
T ss_pred eEeECCCCCcccc-c-------eEEEEE--CCEEEEEeCCC---CCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE
Confidence 4322211111110 0 001112 34433332210 000135689999887542221 2111111222222
Q ss_pred CCCCEEEEEecCC-----CeEEEEEeCCce
Q psy3337 270 DDGRFVAVGTMFT-----GSVFVYIAFSLQ 294 (297)
Q Consensus 270 ~dg~~l~~~~~~d-----g~i~vwd~~~~~ 294 (297)
++++++.|+. + ..+.+||+.+.+
T Consensus 215 -~~~iyv~GG~-~~~~~~~~v~~yd~~~~~ 242 (308)
T 1zgk_A 215 -HNCIYAAGGY-DGQDQLNSVERYDVETET 242 (308)
T ss_dssp -TTEEEEECCB-CSSSBCCCEEEEETTTTE
T ss_pred -CCEEEEEeCC-CCCCccceEEEEeCCCCc
Confidence 6777787775 4 458899987643
No 330
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=93.03 E-value=4 Score=35.18 Aligned_cols=159 Identities=12% Similarity=0.166 Sum_probs=94.2
Q ss_pred CcEEEEEEecCCCEEEEEc-------CCCcEEEEeCCCCeeeEEeccccCCeeEEEEccC---CCEEEEEeCC---CcEE
Q psy3337 118 SLQRVVRLSRNGDLMVTGG-------TDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSIS---GEQIVSIAKD---GKAF 184 (297)
Q Consensus 118 ~~v~~~~~s~~g~~l~s~~-------~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~---~~~l~s~~~d---~~v~ 184 (297)
..|..-..+++.++++..+ ..|.+.+|..+.+ .-+.+.+|......+.+..+ ..+|+.+... +.++
T Consensus 151 ~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLh 229 (494)
T 1bpo_A 151 CQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLH 229 (494)
T ss_dssp CEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTC-CEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEE
T ss_pred ceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccc-ccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEE
Confidence 4466667788888877443 2467889987654 34677788766555544322 1244444443 7888
Q ss_pred EEEcCCC---ce-----eeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCCCceEEE
Q psy3337 185 VWNSKNG---SL-----SKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSGRLRLA 256 (297)
Q Consensus 185 lwd~~~~---~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~ 256 (297)
+.++... .. ...+..+......+.+ .+..++.-..++.+.. -|.|++||+.++.++..
T Consensus 230 i~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPv------amqvs~kygviyviTK--------~G~i~lyDleTgt~i~~ 295 (494)
T 1bpo_A 230 IIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPV------AMQISEKHDVVFLITK--------YGYIHLYDLETGTCIYM 295 (494)
T ss_dssp EEECSCCCTTCCCCCCEEEECCCCTTSTTCCEE------EEEEETTTTEEEEEET--------TSEEEEEETTTCCEEEE
T ss_pred EEEcCCCccCCCCccceeeeeeCCcccccCcee------EEEecccCCEEEEEec--------CceEEEEecccceeeee
Confidence 8888432 11 1111111111112222 2556777777777665 89999999999999887
Q ss_pred eccCCC-eEEEEEcCCCCEEEEEecCCCeEEEEEeCC
Q psy3337 257 REMKES-LSALAVRDDGRFVAVGTMFTGSVFVYIAFS 292 (297)
Q Consensus 257 ~~~~~~-v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~ 292 (297)
-+-... |...+-..+..-++.... .|.|.--.+..
T Consensus 296 nrIs~~~iF~t~~~~~~~Gi~~Vnr-~GqVl~v~v~e 331 (494)
T 1bpo_A 296 NRISGETIFVTAPHEATAGIIGVNR-KGQVLSVCVEE 331 (494)
T ss_dssp EECCSSCEEEEEEETTTTEEEEEET-TCEEEEEEECT
T ss_pred ecccCCceEEecccCCCCcEEEEcc-CceEEEEEEcc
Confidence 665444 655555554444555556 78777666544
No 331
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=92.73 E-value=3.2 Score=33.29 Aligned_cols=149 Identities=15% Similarity=0.102 Sum_probs=72.0
Q ss_pred CCCEEEEEcCC-----CcEEEEeCCCCee--eEEeccccCCeeEEEEccCCCEEEEEeCCC-----cEEEEEcCCCceee
Q psy3337 128 NGDLMVTGGTD-----GHLRLWSFPKMKP--LLHIEAHSKEIDDVDFSISGEQIVSIAKDG-----KAFVWNSKNGSLSK 195 (297)
Q Consensus 128 ~g~~l~s~~~d-----~~i~iwd~~~~~~--~~~~~~~~~~v~~~~~sp~~~~l~s~~~d~-----~v~lwd~~~~~~~~ 195 (297)
++..++.|+.+ ..+.+||..+.+- +..+.........+.+ ++.+++.|+.++ .+.+||+.+.+-..
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~ 138 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFH 138 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTEEEE
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCeEee
Confidence 66777777754 3588899876542 2222211111122222 566777776553 47788887654332
Q ss_pred eeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccC---CCCeEEEEeCCCCceEE--EeccCCCeEEEEEcC
Q psy3337 196 ELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKR---GISYVQQWDVDSGRLRL--AREMKESLSALAVRD 270 (297)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~---~d~~i~~wd~~~~~~~~--~~~~~~~v~~~~~s~ 270 (297)
.-. .|..... . ..+. -+++.++..+. .+. ....+.+||+.+.+=.. .+.....-.+++. -
T Consensus 139 ~~~--~p~~r~~-~-----~~~~--~~~~iyv~GG~----~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~ 203 (302)
T 2xn4_A 139 VAP--MNTRRSS-V-----GVGV--VGGLLYAVGGY----DVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGV-L 203 (302)
T ss_dssp ECC--CSSCCBS-C-----EEEE--ETTEEEEECCE----ETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEE-E
T ss_pred cCC--CCCcccC-c-----eEEE--ECCEEEEEeCC----CCCCCccccEEEEEeCCCCcEEECCCCccccccccEEE-E
Confidence 211 1111000 0 0011 13443333221 011 13468999998754222 2222111122222 2
Q ss_pred CCCEEEEEecCCC-----eEEEEEeCCce
Q psy3337 271 DGRFVAVGTMFTG-----SVFVYIAFSLQ 294 (297)
Q Consensus 271 dg~~l~~~~~~dg-----~i~vwd~~~~~ 294 (297)
++++++.|+. ++ .+.+||+.+.+
T Consensus 204 ~~~iyv~GG~-~~~~~~~~~~~yd~~~~~ 231 (302)
T 2xn4_A 204 NNLLYAVGGH-DGPLVRKSVEVYDPTTNA 231 (302)
T ss_dssp TTEEEEECCB-SSSSBCCCEEEEETTTTE
T ss_pred CCEEEEECCC-CCCcccceEEEEeCCCCC
Confidence 6777788775 53 68899987643
No 332
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=92.53 E-value=3.5 Score=33.31 Aligned_cols=63 Identities=17% Similarity=0.066 Sum_probs=35.2
Q ss_pred CCCEEEEEcCC--------CcEEEEeCCCCe--eeEEeccccCCeeEEEEccCCCEEEEEeC-C-----CcEEEEEcCCC
Q psy3337 128 NGDLMVTGGTD--------GHLRLWSFPKMK--PLLHIEAHSKEIDDVDFSISGEQIVSIAK-D-----GKAFVWNSKNG 191 (297)
Q Consensus 128 ~g~~l~s~~~d--------~~i~iwd~~~~~--~~~~~~~~~~~v~~~~~sp~~~~l~s~~~-d-----~~v~lwd~~~~ 191 (297)
++..++.|+.+ ..+.+||+.+.+ .+..+....... ++. .-++.+++.|+. + ..+.+||+.+.
T Consensus 98 ~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~-~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~ 175 (315)
T 4asc_A 98 LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGH-TVL-SHMDLVYVIGGKGSDRKCLNKMCVYDPKKF 175 (315)
T ss_dssp TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSC-EEE-EETTEEEEECCBCTTSCBCCCEEEEETTTT
T ss_pred CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccce-eEE-EECCEEEEEeCCCCCCcccceEEEEeCCCC
Confidence 56677777642 458899987654 222222111111 122 235667777765 2 46889998766
Q ss_pred c
Q psy3337 192 S 192 (297)
Q Consensus 192 ~ 192 (297)
+
T Consensus 176 ~ 176 (315)
T 4asc_A 176 E 176 (315)
T ss_dssp E
T ss_pred e
Confidence 4
No 333
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=91.98 E-value=2.4 Score=35.29 Aligned_cols=115 Identities=12% Similarity=0.100 Sum_probs=56.3
Q ss_pred CCeeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCC---CeEEEEeccCcccc
Q psy3337 160 KEIDDVDFSISGEQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPK---RSRLFTLANPLAQN 236 (297)
Q Consensus 160 ~~v~~~~~sp~~~~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~---~~~l~~~~~~~~~~ 236 (297)
.....|+|.|+|+.|+.+...+.|++++. .+.....+... +. ...........++++|+ +..|+......-..
T Consensus 18 ~~P~~i~~~pdG~~l~V~e~~G~i~~~~~-~g~~~~~~~~~-~~--v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~ 93 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITLRGGELRHWQA-GKGLSAPLSGV-PD--VWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDD 93 (353)
T ss_dssp SSEEEEEECSTTCCEEEEETTTEEEEEET-TTEECCCCBSC-CC--CCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSS
T ss_pred CCcEEEEEcCCCCEEEEEeCCceEEEEeC-CCceeeEecCC-cc--cccCCCCCceeEEECCCCCCCCEEEEEEeCCCCC
Confidence 35689999999983444557799999985 34322111110 00 00000011234788996 55555543200000
Q ss_pred cCCCCeEEEEeCCCC--c---e--E-EEecc----CCCeEEEEEcCCCCEEEEE
Q psy3337 237 KRGISYVQQWDVDSG--R---L--R-LAREM----KESLSALAVRDDGRFVAVG 278 (297)
Q Consensus 237 g~~d~~i~~wd~~~~--~---~--~-~~~~~----~~~v~~~~~s~dg~~l~~~ 278 (297)
+.....|..|++... . . + ..+.. +.....++|.|||.+.++.
T Consensus 94 g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~ 147 (353)
T 2g8s_A 94 GKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIAL 147 (353)
T ss_dssp SCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEE
T ss_pred CCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEE
Confidence 000235666766432 1 1 1 11211 1114679999999655543
No 334
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=91.94 E-value=4.2 Score=32.86 Aligned_cols=180 Identities=12% Similarity=0.107 Sum_probs=82.9
Q ss_pred eEEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCEEEEEcC----C-------CcEEEEeCCCCee--eEEeccccCCee
Q psy3337 98 NLRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGT----D-------GHLRLWSFPKMKP--LLHIEAHSKEID 163 (297)
Q Consensus 98 ~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~----d-------~~i~iwd~~~~~~--~~~~~~~~~~v~ 163 (297)
.+.. |+.+++....-...............++..++.|+. + ..+.+||..+.+- +..+........
T Consensus 14 ~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~ 93 (315)
T 4asc_A 14 GAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCLFG 93 (315)
T ss_dssp EEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEESCE
T ss_pred ceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhcee
Confidence 4555 777766443111122233334444557788888873 1 1277888876542 112211111111
Q ss_pred EEEEccCCCEEEEEeCC--------CcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCccc
Q psy3337 164 DVDFSISGEQIVSIAKD--------GKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQ 235 (297)
Q Consensus 164 ~~~~sp~~~~l~s~~~d--------~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~ 235 (297)
.+.+ ++.+++.|+.+ ..+.+||+.+.+-...-. .|.. . ....+..-+++ |+..+.. ..
T Consensus 94 ~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~--~p~~-r-------~~~~~~~~~~~-iyv~GG~-~~ 159 (315)
T 4asc_A 94 LGEA--LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDP--LPYV-V-------YGHTVLSHMDL-VYVIGGK-GS 159 (315)
T ss_dssp EEEE--TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCC--CSSC-C-------BSCEEEEETTE-EEEECCB-CT
T ss_pred EEEE--CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCC--CCCc-c-------cceeEEEECCE-EEEEeCC-CC
Confidence 1222 55666666632 458889987764322111 1111 0 00000112344 3333210 00
Q ss_pred ccCCCCeEEEEeCCCCceEE--EeccCCCeEEEEEcCCCCEEEEEecCCC-----eEEEEEeCCc
Q psy3337 236 NKRGISYVQQWDVDSGRLRL--AREMKESLSALAVRDDGRFVAVGTMFTG-----SVFVYIAFSL 293 (297)
Q Consensus 236 ~g~~d~~i~~wd~~~~~~~~--~~~~~~~v~~~~~s~dg~~l~~~~~~dg-----~i~vwd~~~~ 293 (297)
.+..-..+.+||+.+.+=.. .+.....-.+++. -++++++.|+. ++ .+.+||+.+.
T Consensus 160 ~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~-~~~~~~~~~~~yd~~~~ 222 (315)
T 4asc_A 160 DRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATV-HDGRIIVAAGV-TDTGLTSSAEVYSITDN 222 (315)
T ss_dssp TSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEEEEE-CSSSEEEEEEEEETTTT
T ss_pred CCcccceEEEEeCCCCeEEECCCCCCchhceEEEE-ECCEEEEEecc-CCCCccceEEEEECCCC
Confidence 01113578999998753222 2221111122222 26777777776 54 5888888764
No 335
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=90.69 E-value=5.7 Score=32.08 Aligned_cols=64 Identities=17% Similarity=0.193 Sum_probs=34.8
Q ss_pred CCCEEEEEcCC-------CcEEEEeCCCCeee--EEeccccCCeeEEEEccCCCEEEEEeC------CCcEEEEEcCCCc
Q psy3337 128 NGDLMVTGGTD-------GHLRLWSFPKMKPL--LHIEAHSKEIDDVDFSISGEQIVSIAK------DGKAFVWNSKNGS 192 (297)
Q Consensus 128 ~g~~l~s~~~d-------~~i~iwd~~~~~~~--~~~~~~~~~v~~~~~sp~~~~l~s~~~------d~~v~lwd~~~~~ 192 (297)
++..++.|+.+ ..+.+||+.+.+-. ..+....... ++.. .++.+++.|+. -..+.+||+.+.+
T Consensus 109 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~-~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~ 186 (318)
T 2woz_A 109 DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGH-NVIS-HNGMIYCLGGKTDDKKCTNRVFIYNPKKGD 186 (318)
T ss_dssp TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESC-EEEE-ETTEEEEECCEESSSCBCCCEEEEETTTTE
T ss_pred CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCccccc-EEEE-ECCEEEEEcCCCCCCCccceEEEEcCCCCE
Confidence 66777777754 35788888765422 1221111111 1222 35666666653 2358899988764
Q ss_pred e
Q psy3337 193 L 193 (297)
Q Consensus 193 ~ 193 (297)
-
T Consensus 187 W 187 (318)
T 2woz_A 187 W 187 (318)
T ss_dssp E
T ss_pred E
Confidence 3
No 336
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=90.39 E-value=1.5 Score=39.05 Aligned_cols=69 Identities=14% Similarity=0.188 Sum_probs=48.9
Q ss_pred EEEEEecCCCEEEEE-cCCCcEEEEeCCCC------ee-------eEEeccccCCeeEEEEccCCCEEEEEeCCCcEEEE
Q psy3337 121 RVVRLSRNGDLMVTG-GTDGHLRLWSFPKM------KP-------LLHIEAHSKEIDDVDFSISGEQIVSIAKDGKAFVW 186 (297)
Q Consensus 121 ~~~~~s~~g~~l~s~-~~d~~i~iwd~~~~------~~-------~~~~~~~~~~v~~~~~sp~~~~l~s~~~d~~v~lw 186 (297)
..+.++|||++++.+ ..+.++.++|++.. +. +.... -.......+|.++|.-..+---|..|.-|
T Consensus 326 HGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~~G~aYTtlfidSqvvkW 404 (638)
T 3sbq_A 326 HGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDGRGNAYTTLFIDSQVVKW 404 (638)
T ss_dssp CCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECSSSEEEEEETTTTEEEEE
T ss_pred cceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECCCCceEeeeeecceEEEE
Confidence 478899999887654 56889999998632 11 12222 23456788999999545555679999999
Q ss_pred EcCC
Q psy3337 187 NSKN 190 (297)
Q Consensus 187 d~~~ 190 (297)
++..
T Consensus 405 ni~~ 408 (638)
T 3sbq_A 405 NMEE 408 (638)
T ss_dssp EHHH
T ss_pred eccH
Confidence 9864
No 337
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=89.73 E-value=7.5 Score=31.94 Aligned_cols=53 Identities=6% Similarity=-0.003 Sum_probs=28.5
Q ss_pred eEEEEeCCCC--ceEEEeccCCCeEEEEEcCCCCEEEEEecCCC------eEEEEEeCCceec
Q psy3337 242 YVQQWDVDSG--RLRLAREMKESLSALAVRDDGRFVAVGTMFTG------SVFVYIAFSLQMC 296 (297)
Q Consensus 242 ~i~~wd~~~~--~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~dg------~i~vwd~~~~~~~ 296 (297)
.+.+||+.+. +.+..+.....- ..++..++++++.|+. ++ .|.++++.+.+.+
T Consensus 286 ~~~~yd~~~~~W~~~~~~p~~r~~-~~~~~~~~~i~v~GG~-~~~~~~~~~v~~l~~~~~~~~ 346 (357)
T 2uvk_A 286 STDIHLWHNGKWDKSGELSQGRAY-GVSLPWNNSLLIIGGE-TAGGKAVTDSVLITVKDNKVT 346 (357)
T ss_dssp CCEEEECC---CEEEEECSSCCBS-SEEEEETTEEEEEEEE-CGGGCEEEEEEEEEC-CCSCE
T ss_pred eEEEEecCCCceeeCCCCCCCccc-ceeEEeCCEEEEEeee-CCCCCEeeeEEEEEEcCcEeE
Confidence 5788998863 344443332221 1223347788888885 43 3666688776643
No 338
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=88.72 E-value=11 Score=32.63 Aligned_cols=51 Identities=14% Similarity=0.200 Sum_probs=33.4
Q ss_pred EEEEEEecCCC-EEEEEcCCCcEEEEeCCCC---eeeEEec---------cccCCeeEEEEccC
Q psy3337 120 QRVVRLSRNGD-LMVTGGTDGHLRLWSFPKM---KPLLHIE---------AHSKEIDDVDFSIS 170 (297)
Q Consensus 120 v~~~~~s~~g~-~l~s~~~d~~i~iwd~~~~---~~~~~~~---------~~~~~v~~~~~sp~ 170 (297)
-+.++|.|+|. .|+.+...|.|++++.... ..+..+. ........|+|+|+
T Consensus 16 P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~ 79 (463)
T 2wg3_C 16 PVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPN 79 (463)
T ss_dssp EEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTT
T ss_pred ceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCC
Confidence 46899999995 4555567899999975322 1222221 11356789999996
No 339
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=88.11 E-value=7.7 Score=30.03 Aligned_cols=101 Identities=9% Similarity=-0.024 Sum_probs=60.6
Q ss_pred CCeeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeeccCCCCceEEE---EeeeeeeeeeCCCCeEEEEeccCcccc
Q psy3337 160 KEIDDVDFSISGEQIVSIAKDGKAFVWNSKNGSLSKELKWNTPDNIKYLF---KRCRYGLVEDSPKRSRLFTLANPLAQN 236 (297)
Q Consensus 160 ~~v~~~~~sp~~~~l~s~~~d~~v~lwd~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~s~~~~~l~~~~~~~~~~ 236 (297)
..+..++|+|++.+.++ .+|.++-.+..+.....-+.. . ..+ .-..|..+.|.|+|.+.++ .
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s-~-----t~IG~~Gw~~F~a~~fD~~G~LYav--~----- 105 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGR-A-----KKIGNGGWNQFQFLFFDPNGYLYAV--S----- 105 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHH-C-----EEEECSCGGGCSEEEECTTSCEEEE--E-----
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCCccccccc-c-----cEecccccccceEEEECCCCCEEEe--C-----
Confidence 36789999999986666 667766666544222111100 0 000 0012456888999976655 3
Q ss_pred cCCCCeEEEEeCCCCceE------EEeccC--CCeEEEEEcCCCCEEEEE
Q psy3337 237 KRGISYVQQWDVDSGRLR------LAREMK--ESLSALAVRDDGRFVAVG 278 (297)
Q Consensus 237 g~~d~~i~~wd~~~~~~~------~~~~~~--~~v~~~~~s~dg~~l~~~ 278 (297)
|+.|+-++..+...- ..+-.. ..+..|.|.|+|.+-++.
T Consensus 106 ---dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~ 152 (236)
T 1tl2_A 106 ---KDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH 152 (236)
T ss_dssp ---TTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE
T ss_pred ---CCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe
Confidence 799999987542111 111111 238999999999888777
No 340
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=87.79 E-value=9 Score=33.23 Aligned_cols=30 Identities=13% Similarity=0.192 Sum_probs=22.9
Q ss_pred CCeeEEEEccCCC-EEEEEeCCCcEEEEEcC
Q psy3337 160 KEIDDVDFSISGE-QIVSIAKDGKAFVWNSK 189 (297)
Q Consensus 160 ~~v~~~~~sp~~~-~l~s~~~d~~v~lwd~~ 189 (297)
...+.|+|.|++. .|+++...|.|++++..
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~ 44 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPE 44 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTT
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCC
Confidence 4567999999986 45555788999999753
No 341
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=87.50 E-value=11 Score=31.20 Aligned_cols=61 Identities=10% Similarity=-0.014 Sum_probs=35.4
Q ss_pred CcEEEEEEecC---CCEEEEEcC----C----CcEEEEeCCCC-------eee-EEecc-ccCCeeEEEEccCCCEEEEE
Q psy3337 118 SLQRVVRLSRN---GDLMVTGGT----D----GHLRLWSFPKM-------KPL-LHIEA-HSKEIDDVDFSISGEQIVSI 177 (297)
Q Consensus 118 ~~v~~~~~s~~---g~~l~s~~~----d----~~i~iwd~~~~-------~~~-~~~~~-~~~~v~~~~~sp~~~~l~s~ 177 (297)
.....++|+|+ +..|..+.. + +.|..|+.... +.+ ..+.. .......|+|.|||.++++.
T Consensus 73 ~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~ 152 (354)
T 3a9g_A 73 AGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITT 152 (354)
T ss_dssp CSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEEC
T ss_pred CceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEE
Confidence 45789999997 444444332 3 56777776543 111 11221 11234679999999876664
Q ss_pred e
Q psy3337 178 A 178 (297)
Q Consensus 178 ~ 178 (297)
+
T Consensus 153 G 153 (354)
T 3a9g_A 153 G 153 (354)
T ss_dssp C
T ss_pred C
Confidence 3
No 342
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=86.26 E-value=3.8 Score=36.49 Aligned_cols=65 Identities=11% Similarity=-0.007 Sum_probs=43.4
Q ss_pred eeeeeCCCCeEEEEeccCc----ccccCCCCeEEEEeCCCCceEEEeccCC--CeEEEEEcCCCCEEEEEe
Q psy3337 215 GLVEDSPKRSRLFTLANPL----AQNKRGISYVQQWDVDSGRLRLAREMKE--SLSALAVRDDGRFVAVGT 279 (297)
Q Consensus 215 ~~~~~s~~~~~l~~~~~~~----~~~g~~d~~i~~wd~~~~~~~~~~~~~~--~v~~~~~s~dg~~l~~~~ 279 (297)
..|.|.++|.+.+...... ...+.....+..++..++++...+.... .++.++|+||++.|.+.-
T Consensus 479 DnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 479 DGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp EEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 3588899998766332210 0011123367888888888877776542 399999999999988765
No 343
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=85.60 E-value=13 Score=29.97 Aligned_cols=179 Identities=14% Similarity=0.081 Sum_probs=81.4
Q ss_pred EEE-EeeCCCeEEEEecCCCCcEEEEEEecCCCEEEEEcC----CC-------cEEEEeCCCCeee--EEeccccCCeeE
Q psy3337 99 LRF-GFKTFDSVQTVFAGSESLQRVVRLSRNGDLMVTGGT----DG-------HLRLWSFPKMKPL--LHIEAHSKEIDD 164 (297)
Q Consensus 99 i~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~----d~-------~i~iwd~~~~~~~--~~~~~~~~~v~~ 164 (297)
+.. |+.+.+....-...............++..++.|+. ++ .+.+||..+.+-. ..+.........
T Consensus 26 ~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~ 105 (318)
T 2woz_A 26 AVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFGL 105 (318)
T ss_dssp EEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCEE
T ss_pred eEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccce
Confidence 444 777666444211121222233344557788888873 12 1778887765422 122211111112
Q ss_pred EEEccCCCEEEEEeCC-------CcEEEEEcCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCccccc
Q psy3337 165 VDFSISGEQIVSIAKD-------GKAFVWNSKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNK 237 (297)
Q Consensus 165 ~~~sp~~~~l~s~~~d-------~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g 237 (297)
+.+ ++.+++.|+.+ ..+.+||+.+.+-...- ..|.. ... . .++ ..+++.++..+.. ..+
T Consensus 106 ~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~--~~p~~-r~~-----~-~~~-~~~~~iyv~GG~~--~~~ 171 (318)
T 2woz_A 106 GEV--DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVK--NLPIK-VYG-----H-NVI-SHNGMIYCLGGKT--DDK 171 (318)
T ss_dssp EEE--TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEEC--CCSSC-EES-----C-EEE-EETTEEEEECCEE--SSS
T ss_pred EEE--CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECC--CCCCc-ccc-----c-EEE-EECCEEEEEcCCC--CCC
Confidence 222 56677777653 34778888765433221 11111 000 0 011 1244433332110 000
Q ss_pred CCCCeEEEEeCCCCce--EEEeccCCCeEEEEEcCCCCEEEEEecCC-----CeEEEEEeCCc
Q psy3337 238 RGISYVQQWDVDSGRL--RLAREMKESLSALAVRDDGRFVAVGTMFT-----GSVFVYIAFSL 293 (297)
Q Consensus 238 ~~d~~i~~wd~~~~~~--~~~~~~~~~v~~~~~s~dg~~l~~~~~~d-----g~i~vwd~~~~ 293 (297)
.....+.+||+.+.+= +..+.....-.+++. -+++.++.|+. + ..+.+||+.+.
T Consensus 172 ~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~-~~~~~~~~~~~yd~~~~ 232 (318)
T 2woz_A 172 KCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAI-HKGKIVIAGGV-TEDGLSASVEAFDLKTN 232 (318)
T ss_dssp CBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEEEEE-ETTEEEEEEEEEETTTC
T ss_pred CccceEEEEcCCCCEEEECCCCCCCcccceEEE-ECCEEEEEcCc-CCCCccceEEEEECCCC
Confidence 1134699999987542 222221111122222 26677777764 3 35778887664
No 344
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=83.77 E-value=23 Score=35.61 Aligned_cols=157 Identities=13% Similarity=0.201 Sum_probs=83.4
Q ss_pred CcEEEEEEecCCCEEEEEc-------CCCcEEEEeCCCCeeeEEeccccCCeeEEEEcc---CCCEEEEEeC---CCcEE
Q psy3337 118 SLQRVVRLSRNGDLMVTGG-------TDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSI---SGEQIVSIAK---DGKAF 184 (297)
Q Consensus 118 ~~v~~~~~s~~g~~l~s~~-------~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp---~~~~l~s~~~---d~~v~ 184 (297)
..|..-..+++.++++..| ..|.+.+|..+.+ ..+.+.+|......+.... ...+|+.+.. .+.++
T Consensus 151 ~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~-~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLh 229 (1630)
T 1xi4_A 151 CQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLH 229 (1630)
T ss_pred CeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccc-cchhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEE
Confidence 3455666778888877433 4578888887643 3345667766554444421 1223333322 36888
Q ss_pred EEEcCCC---ceeee---eeccC-CCC-ceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCCCceEEE
Q psy3337 185 VWNSKNG---SLSKE---LKWNT-PDN-IKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSGRLRLA 256 (297)
Q Consensus 185 lwd~~~~---~~~~~---~~~~~-~~~-~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~ 256 (297)
|.++... ..... ....- |+. ..+.+ .+..++.-..++.++. -|.|++||+.++.++..
T Consensus 230 i~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv------~~~vs~k~g~iy~itk--------~G~~~~~d~~t~~~i~~ 295 (1630)
T 1xi4_A 230 IIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPV------AMQISEKHDVVFLITK--------YGYIHLYDLETGTCIYM 295 (1630)
T ss_pred EEecCCCccCCCCCccccccccCCcccccCcce------EEEeccccCEEEEEec--------CceEEEEecccchhhhh
Confidence 8887432 11110 00000 110 01111 2455666666766555 89999999999988765
Q ss_pred eccCCC-eEEEEEcC-CCCEEEEEecCCCeEEEEEeC
Q psy3337 257 REMKES-LSALAVRD-DGRFVAVGTMFTGSVFVYIAF 291 (297)
Q Consensus 257 ~~~~~~-v~~~~~s~-dg~~l~~~~~~dg~i~vwd~~ 291 (297)
-+-... |...+-+. .+..+.+. . .|.|.--.+.
T Consensus 296 ~ris~~~iF~~~~~~~~~g~~~vn-r-~G~vl~v~v~ 330 (1630)
T 1xi4_A 296 NRISGETIFVTAPHEATAGIIGVN-R-KGQVLSVCVE 330 (1630)
T ss_pred ccccCCceEEeccCCCCCceEEEc-C-CceEEEEEEc
Confidence 544333 44334333 34344333 4 6666554443
No 345
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=83.63 E-value=4.7 Score=38.59 Aligned_cols=39 Identities=15% Similarity=0.090 Sum_probs=33.5
Q ss_pred CeeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeec
Q psy3337 161 EIDDVDFSISGEQIVSIAKDGKAFVWNSKNGSLSKELKW 199 (297)
Q Consensus 161 ~v~~~~~sp~~~~l~s~~~d~~v~lwd~~~~~~~~~~~~ 199 (297)
.+.+++..++..++++-+.|+++++|++.+++++.+...
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~dL 275 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIEL 275 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEEC
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeecc
Confidence 466777778888999999999999999999999887653
No 346
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=82.90 E-value=7.2 Score=35.01 Aligned_cols=64 Identities=11% Similarity=-0.018 Sum_probs=43.3
Q ss_pred eeeeCCCCeEEEEeccC----cccccCCCCeEEEEeCCCCceEEEeccCCC--eEEEEEcCCCCEEEEEe
Q psy3337 216 LVEDSPKRSRLFTLANP----LAQNKRGISYVQQWDVDSGRLRLAREMKES--LSALAVRDDGRFVAVGT 279 (297)
Q Consensus 216 ~~~~s~~~~~l~~~~~~----~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~--v~~~~~s~dg~~l~~~~ 279 (297)
.|+|+|.|.+++.-... ....+-....+.+.+..++++.+.+..+.. ++.++|+||++.|++.-
T Consensus 480 NL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvni 549 (592)
T 3zwu_A 480 GLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp EEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred ceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEEE
Confidence 48899999865554320 000111234577778888888887777643 99999999999987753
No 347
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=82.45 E-value=19 Score=29.46 Aligned_cols=52 Identities=19% Similarity=0.259 Sum_probs=27.9
Q ss_pred CCCEEEEEcC-C---------CcEEEEeCCCCee--eEEeccccCCeeEEEEccCCCEEEEEeCC
Q psy3337 128 NGDLMVTGGT-D---------GHLRLWSFPKMKP--LLHIEAHSKEIDDVDFSISGEQIVSIAKD 180 (297)
Q Consensus 128 ~g~~l~s~~~-d---------~~i~iwd~~~~~~--~~~~~~~~~~v~~~~~sp~~~~l~s~~~d 180 (297)
++.+++.|+. + ..+.+||+.+.+= +..+.. .......+...++.+++.|+.+
T Consensus 65 ~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p-~~r~~~~~~~~~~~iyv~GG~~ 128 (357)
T 2uvk_A 65 DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAP-MGMAGHVTFVHNGKAYVTGGVN 128 (357)
T ss_dssp TTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCS-SCCSSEEEEEETTEEEEEECCC
T ss_pred CCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCC-cccccceEEEECCEEEEEeCcC
Confidence 6677777776 2 4688999876542 222220 1111111122467777888754
No 348
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=81.74 E-value=31 Score=31.54 Aligned_cols=159 Identities=11% Similarity=0.066 Sum_probs=77.2
Q ss_pred CCCEEEEEcCC------CcEEEEeCCCCe--eeEEeccccCCeeEEEEccCCCEEEEEeCCC--cEEEEEcCCCceeeee
Q psy3337 128 NGDLMVTGGTD------GHLRLWSFPKMK--PLLHIEAHSKEIDDVDFSISGEQIVSIAKDG--KAFVWNSKNGSLSKEL 197 (297)
Q Consensus 128 ~g~~l~s~~~d------~~i~iwd~~~~~--~~~~~~~~~~~v~~~~~sp~~~~l~s~~~d~--~v~lwd~~~~~~~~~~ 197 (297)
++..++.||.+ ..+.+||+.+.+ .+..+..... -.++....++.+++.|+.++ .+.+||+.+..-...-
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~-~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~ 529 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRF-RHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVT 529 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCB-SCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECC
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcc-cceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEcc
Confidence 77777887754 357888987643 2222221111 12233324778888887654 6899998876432211
Q ss_pred e-ccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCccccc-CCCCeEEEEeCCCCce-----EEEec---cCCC-eEEE
Q psy3337 198 K-WNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNK-RGISYVQQWDVDSGRL-----RLARE---MKES-LSAL 266 (297)
Q Consensus 198 ~-~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g-~~d~~i~~wd~~~~~~-----~~~~~---~~~~-v~~~ 266 (297)
. +..|.. .. ....+.+..+...|+..+.. ...+ .....+.+||+.+.+- ...+. .... -.++
T Consensus 530 ~~g~~p~~-r~-----~~~a~v~~~~~~~iyv~GG~-~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~ 602 (695)
T 2zwa_A 530 PKDEFFQN-SL-----VSAGLEFDPVSKQGIILGGG-FMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQI 602 (695)
T ss_dssp CSSGGGGS-CC-----BSCEEEEETTTTEEEEECCB-CTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEE
T ss_pred CCCCCCCc-cc-----ceeEEEEeCCCCEEEEECCc-CCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceE
Confidence 1 001110 00 00112334442334433320 0000 1135789999987651 11221 1111 2233
Q ss_pred EEcCCCCEEEEEecC-------CCeEEEEEeCCce
Q psy3337 267 AVRDDGRFVAVGTMF-------TGSVFVYIAFSLQ 294 (297)
Q Consensus 267 ~~s~dg~~l~~~~~~-------dg~i~vwd~~~~~ 294 (297)
+...++++++.|+.. ...+.+||+.+.+
T Consensus 603 ~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~ 637 (695)
T 2zwa_A 603 KYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSET 637 (695)
T ss_dssp EEEETTEEEEECCBCSSCCCCTTTSEEEEETTTTE
T ss_pred EEeCCCEEEEECCccCCCCCCCCCeEEEEECCCCe
Confidence 333347788887740 2458899987653
No 349
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=81.38 E-value=43 Score=32.86 Aligned_cols=173 Identities=11% Similarity=0.073 Sum_probs=96.8
Q ss_pred CceEEE-EeeCCCeEEEEecCCCCcEEEEEEe---cC-CCEEEEEc----------CCCcEEEEeCCCCeeeEEe-cccc
Q psy3337 96 EKNLRF-GFKTFDSVQTVFAGSESLQRVVRLS---RN-GDLMVTGG----------TDGHLRLWSFPKMKPLLHI-EAHS 159 (297)
Q Consensus 96 d~~i~~-~~~~~~~~~~~~~~h~~~v~~~~~s---~~-g~~l~s~~----------~d~~i~iwd~~~~~~~~~~-~~~~ 159 (297)
-..+++ |..+.+.+..+.-.....+.+++.- .+ ..+|+.|. ..|.|.+|++..++..... ....
T Consensus 806 ~s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~ 885 (1158)
T 3ei3_A 806 VHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVK 885 (1158)
T ss_dssp EEEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEES
T ss_pred eEEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcC
Confidence 356888 9888888777663444555666532 22 36788775 3478999998644322111 1235
Q ss_pred CCeeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeecc-CCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccC
Q psy3337 160 KEIDDVDFSISGEQIVSIAKDGKAFVWNSKNGSLSKELKWN-TPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKR 238 (297)
Q Consensus 160 ~~v~~~~~sp~~~~l~s~~~d~~v~lwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~ 238 (297)
+.|++++-. +| +|+++ ...+|++|++...+.+. .... -+. +..+.....+.+++. |.
T Consensus 886 g~v~al~~~-~g-~Lla~-ig~~l~vy~l~~~~~L~-~~~~~~~~----------i~~~~l~~~~~~I~v--------gD 943 (1158)
T 3ei3_A 886 GAVYSMVEF-NG-KLLAS-INSTVRLYEWTTEKELR-TECNHYNN----------IMALYLKTKGDFILV--------GD 943 (1158)
T ss_dssp SCEEEEEEE-TT-EEEEE-ETTEEEEEEECTTSCEE-EEEEECCC----------SCEEEEEEETTEEEE--------EE
T ss_pred CcCEEEeee-CC-EEEEE-cCCEEEEEECCCCceEE-EEeecccc----------EEEEEEeccCCEEEE--------EE
Confidence 678888744 45 44444 34789999997655433 1110 000 000111122444554 33
Q ss_pred CCCeEEE--EeCCCCceEEEecc--CCCeEEEEEcCCCCEEEEEecCCCeEEEEEeCC
Q psy3337 239 GISYVQQ--WDVDSGRLRLAREM--KESLSALAVRDDGRFVAVGTMFTGSVFVYIAFS 292 (297)
Q Consensus 239 ~d~~i~~--wd~~~~~~~~~~~~--~~~v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~ 292 (297)
.-..+.+ |+....+....-.. ...++++.+-.+ ..++.+.. +|.+.++....
T Consensus 944 ~~~Sv~~~~y~~~~~~L~~~a~D~~~~~vta~~~ld~-~t~l~aD~-~gNl~vl~~~~ 999 (1158)
T 3ei3_A 944 LMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDD-DNFLGAEN-AFNLFVCQKDS 999 (1158)
T ss_dssp SSBCEEEEEEETTTTEEEEEEECCSCBCEEEEEEEET-TEEEEEET-TSEEEEEEECT
T ss_pred hhheEEEEEEEcCCCeEEEEEeecccccEEEEEEEcc-CcEEEEcC-CCcEEEEecCC
Confidence 3455555 44444443333222 223888888655 46677888 99999987654
No 350
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=80.96 E-value=44 Score=32.75 Aligned_cols=74 Identities=12% Similarity=-0.041 Sum_probs=47.9
Q ss_pred cEEEEEEecCCCEEEEEcCCCcEEEEeCCCCeee--EEeccccCCeeEEEEccC------CCEEEEEeC-CCcEEEEEcC
Q psy3337 119 LQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPL--LHIEAHSKEIDDVDFSIS------GEQIVSIAK-DGKAFVWNSK 189 (297)
Q Consensus 119 ~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~--~~~~~~~~~v~~~~~sp~------~~~l~s~~~-d~~v~lwd~~ 189 (297)
.|...+.+ +.+++.+. ++.+.++.+..++.. ... .-...|.|+++.|. +.+++.|.. |++++|+++.
T Consensus 515 ~I~~As~n--~~~vvva~-g~~l~~fel~~~~L~~~~~~-~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~ 590 (1158)
T 3ei3_A 515 NISVASCN--SSQVVVAV-GRALYYLQIHPQELRQISHT-EMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLP 590 (1158)
T ss_dssp CCCEEEEC--SSEEEEEE-TTEEEEEEEETTEEEEEEEE-ECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETT
T ss_pred EEEEEEeC--CCEEEEEE-CCEEEEEEeeCCceeeeccc-CCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECC
Confidence 34444443 23555554 567777777655322 121 12457999999863 468999997 9999999998
Q ss_pred CCceeee
Q psy3337 190 NGSLSKE 196 (297)
Q Consensus 190 ~~~~~~~ 196 (297)
+.+.+..
T Consensus 591 ~l~~~~~ 597 (1158)
T 3ei3_A 591 SFELLHK 597 (1158)
T ss_dssp TCCEEEE
T ss_pred CCCeEEE
Confidence 7655543
No 351
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=80.32 E-value=36 Score=31.31 Aligned_cols=154 Identities=8% Similarity=0.087 Sum_probs=83.7
Q ss_pred CcEEEEEEecCCCEEEEEcCCCcEEEEeCCCCeeeEEeccccCCeeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeee
Q psy3337 118 SLQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAKDGKAFVWNSKNGSLSKEL 197 (297)
Q Consensus 118 ~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~d~~v~lwd~~~~~~~~~~ 197 (297)
..|.++....+| .|..|..+| +..||..+.+...........|.++.. .++ .|..++.+ -+..||..+++.. .+
T Consensus 63 ~~i~~i~~d~~g-~lWigT~~G-l~~yd~~~~~f~~~~~~~~~~i~~i~~-~~g-~lWigt~~-Gl~~~~~~~~~~~-~~ 136 (758)
T 3ott_A 63 TRIYCGVIIDNT-YLYMGTDNG-ILVYNYRADRYEQPETDFPTDVRTMAL-QGD-TLWLGALN-GLYTYQLQSRKLT-SF 136 (758)
T ss_dssp SCEEEEEEETTT-EEEEEETTE-EEEEETTTTEECCCSCCCCSCEEEEEE-ETT-EEEEEETT-EEEEEETTTCCEE-EE
T ss_pred ceEEEEEEcCCC-cEEEEeCCC-eEEEeCCCCEEECcccCCCceEEEEEe-cCC-cEEEEcCC-cceeEeCCCCeEE-Ee
Confidence 458888777776 466666555 788998765432211112234666654 355 45555555 5888998765432 22
Q ss_pred eccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCCCceEEE-eccC----C-CeEEEEEcCC
Q psy3337 198 KWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSGRLRLA-REMK----E-SLSALAVRDD 271 (297)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~-~~~~----~-~v~~~~~s~d 271 (297)
...... .....+..+....++...+.. .+-|..++..+++.... .... . .|.++...++
T Consensus 137 ~~~~~~-----l~~~~i~~i~~d~~g~lWigt----------~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~ 201 (758)
T 3ott_A 137 DTRRNG-----LPNNTIYSIIRTKDNQIYVGT----------YNGLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTT 201 (758)
T ss_dssp CHHHHC-----CSCSCEEEEEECTTCCEEEEE----------TTEEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETT
T ss_pred ccCCCC-----cCCCeEEEEEEcCCCCEEEEe----------CCCHhhCccCCCceEEecCCCccccccceeEEEEEECC
Confidence 110000 000112234455666654432 23577888876553321 1111 1 2888888877
Q ss_pred CCEEEEEecCCCeEEEEEeCCce
Q psy3337 272 GRFVAVGTMFTGSVFVYIAFSLQ 294 (297)
Q Consensus 272 g~~l~~~~~~dg~i~vwd~~~~~ 294 (297)
+..|..|+. . -+..+|..+++
T Consensus 202 ~~~lWigt~-~-Gl~~~~~~~~~ 222 (758)
T 3ott_A 202 RQCVWIGTE-G-YLFQYFPSTGQ 222 (758)
T ss_dssp TTEEEEEEE-E-EEEEEETTTTE
T ss_pred CCEEEEEEC-C-CCeEEcCCCCe
Confidence 776666775 4 47778776543
No 352
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=78.90 E-value=8.3 Score=34.60 Aligned_cols=58 Identities=10% Similarity=0.078 Sum_probs=40.7
Q ss_pred EEEEEEecCCCEEEEEcCC------------CcEEEEeCCCCeeeEEeccc-cCCeeEEEEccCCCEEEEE
Q psy3337 120 QRVVRLSRNGDLMVTGGTD------------GHLRLWSFPKMKPLLHIEAH-SKEIDDVDFSISGEQIVSI 177 (297)
Q Consensus 120 v~~~~~s~~g~~l~s~~~d------------~~i~iwd~~~~~~~~~~~~~-~~~v~~~~~sp~~~~l~s~ 177 (297)
.--|.|+|.|++++.-..+ +.+.+.+..+++..+.+.++ ..+++.++|+||++.|++.
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 3578999999876654332 23555666677766555554 4589999999999887765
No 353
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=77.89 E-value=42 Score=30.71 Aligned_cols=152 Identities=9% Similarity=0.059 Sum_probs=75.4
Q ss_pred cCCCEEEEEcCC----CcEEEEeCCCCee--eE-E-----eccccCCeeEEEEcc-CCCEEEEEeCC------CcEEEEE
Q psy3337 127 RNGDLMVTGGTD----GHLRLWSFPKMKP--LL-H-----IEAHSKEIDDVDFSI-SGEQIVSIAKD------GKAFVWN 187 (297)
Q Consensus 127 ~~g~~l~s~~~d----~~i~iwd~~~~~~--~~-~-----~~~~~~~v~~~~~sp-~~~~l~s~~~d------~~v~lwd 187 (297)
.++..++.||.+ ..+.+||..+.+- +. . +..... -.++...+ ++.+++.|+.+ ..+.+||
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~-~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd 474 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARM-CHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFD 474 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCB-SCEEEEETTTTEEEEECCBSSTTCBCCCCEEEE
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCcccc-ceEEEEEccCCEEEEEcCCCCCCCccccEEEEe
Confidence 466777777753 4688888876542 22 1 111111 12333333 67777777643 3477888
Q ss_pred cCCCceeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCCCceEEEe-----ccCCC
Q psy3337 188 SKNGSLSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSGRLRLAR-----EMKES 262 (297)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~-----~~~~~ 262 (297)
+.+..-...- ..|.. ... . ..+.-.++..++..+. . ..+.+.+||+.+.+=...- .....
T Consensus 475 ~~t~~W~~~~--~~p~~-R~~-----h-~~~~~~~~~iyv~GG~-----~-~~~~v~~yd~~t~~W~~~~~~g~~p~~r~ 539 (695)
T 2zwa_A 475 MKTREWSMIK--SLSHT-RFR-----H-SACSLPDGNVLILGGV-----T-EGPAMLLYNVTEEIFKDVTPKDEFFQNSL 539 (695)
T ss_dssp TTTTEEEECC--CCSBC-CBS-----C-EEEECTTSCEEEECCB-----C-SSCSEEEEETTTTEEEECCCSSGGGGSCC
T ss_pred CCCCcEEECC--CCCCC-ccc-----c-eEEEEcCCEEEEECCC-----C-CCCCEEEEECCCCceEEccCCCCCCCccc
Confidence 8765332221 11111 000 0 1112135554444322 1 1127999999875422211 11111
Q ss_pred -eEEEEEcCC-CCEEEEEecC------CCeEEEEEeCCce
Q psy3337 263 -LSALAVRDD-GRFVAVGTMF------TGSVFVYIAFSLQ 294 (297)
Q Consensus 263 -v~~~~~s~d-g~~l~~~~~~------dg~i~vwd~~~~~ 294 (297)
..++.+..+ ++.++.|+.. -..+.+||+.+.+
T Consensus 540 ~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 540 VSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp BSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred ceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCc
Confidence 233555555 6677777641 1458899987754
No 354
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=72.03 E-value=24 Score=31.55 Aligned_cols=60 Identities=8% Similarity=0.045 Sum_probs=41.9
Q ss_pred cEEEEEEecCCCEEEEEcC------------CCcEEEEeCCCCeeeEEeccc-cCCeeEEEEccCCCEEEEEe
Q psy3337 119 LQRVVRLSRNGDLMVTGGT------------DGHLRLWSFPKMKPLLHIEAH-SKEIDDVDFSISGEQIVSIA 178 (297)
Q Consensus 119 ~v~~~~~s~~g~~l~s~~~------------d~~i~iwd~~~~~~~~~~~~~-~~~v~~~~~sp~~~~l~s~~ 178 (297)
....|.|.++|.+.++-.. .+.|..++..+++....+... ...++.++|+||++.|+++-
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 3568999999987773221 225677777777765555433 35789999999999887763
No 355
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=71.24 E-value=45 Score=27.99 Aligned_cols=145 Identities=8% Similarity=0.004 Sum_probs=80.7
Q ss_pred cEEEEeCCCC--eeeEEeccc------cCCeeEEEEc---cC----CCEEEEEe-CCCcEEEEEcCCCceeeeeeccC-C
Q psy3337 140 HLRLWSFPKM--KPLLHIEAH------SKEIDDVDFS---IS----GEQIVSIA-KDGKAFVWNSKNGSLSKELKWNT-P 202 (297)
Q Consensus 140 ~i~iwd~~~~--~~~~~~~~~------~~~v~~~~~s---p~----~~~l~s~~-~d~~v~lwd~~~~~~~~~~~~~~-~ 202 (297)
.|.+||+.+. +.++++.-. ...+..+.+. |. +.+++.+. ...-|.++|+.+++..+.+.... |
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~p 203 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKA 203 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSC
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCcc
Confidence 5888999998 877765422 3457788887 22 33444443 46779999999987766553111 2
Q ss_pred CC-ceEEEE------eeeeeeeeeCCC----CeEEEEeccCcccccCCCCeEEEEe---CCC---CceEEEeccC---CC
Q psy3337 203 DN-IKYLFK------RCRYGLVEDSPK----RSRLFTLANPLAQNKRGISYVQQWD---VDS---GRLRLAREMK---ES 262 (297)
Q Consensus 203 ~~-~~~~~~------~~~~~~~~~s~~----~~~l~~~~~~~~~~g~~d~~i~~wd---~~~---~~~~~~~~~~---~~ 262 (297)
+. ..+.+. ...+..++.+|+ ++.|+.... . ...++-.. ++. ...+..+-.. ..
T Consensus 204 d~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~pl-----s--s~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~ 276 (381)
T 3q6k_A 204 ERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAG-----S--AIKVYSVNTKELKQKGGKLNPELLGNRGKYND 276 (381)
T ss_dssp CSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEES-----S--CSEEEEEEHHHHSSTTCCCCCEEEEECCTTCC
T ss_pred ccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEEC-----C--CCcEEEEEHHHhhCcchhhceEEeeecCCCCC
Confidence 21 111111 123446888888 777777554 0 11222222 111 1112222111 22
Q ss_pred eEEEEEc-CCCCEEEEEecCCCeEEEEEeCC
Q psy3337 263 LSALAVR-DDGRFVAVGTMFTGSVFVYIAFS 292 (297)
Q Consensus 263 v~~~~~s-~dg~~l~~~~~~dg~i~vwd~~~ 292 (297)
-..+++. .+|..+++--. ...|..|+..+
T Consensus 277 ~~~~~~D~~~G~ly~~~~~-~~aI~~w~~~~ 306 (381)
T 3q6k_A 277 AIALAYDPKTKVIFFAEAN-TKQVSCWNTQK 306 (381)
T ss_dssp EEEEEECTTTCEEEEEESS-SSEEEEEETTS
T ss_pred cceEEEeCCCCeEEEEecc-CCeEEEEeCCC
Confidence 4456675 56766666666 88999999865
No 356
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=70.94 E-value=5.2 Score=38.28 Aligned_cols=33 Identities=6% Similarity=-0.070 Sum_probs=29.9
Q ss_pred eEEEEEcCCCCEEEEEecCCCeEEEEEeCCceec
Q psy3337 263 LSALAVRDDGRFVAVGTMFTGSVFVYIAFSLQMC 296 (297)
Q Consensus 263 v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~~~~~ 296 (297)
+.+++..++..++++-+. |+++|+|++.+++++
T Consensus 238 ~~~~~~~~~~~~lftl~~-D~~LRiWsl~t~~~v 270 (950)
T 4gq2_M 238 IISMIFLSTYNVLVMLSL-DYKLKVLDLSTNQCV 270 (950)
T ss_dssp EEEEEEETTTTEEEEEET-TCEEEEEETTTTEEE
T ss_pred EEEEeecCCCcEEEEEEC-CCEEEEEECCCCCeE
Confidence 777888889999999999 999999999999875
No 357
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=69.94 E-value=4.6 Score=39.48 Aligned_cols=39 Identities=15% Similarity=0.090 Sum_probs=32.3
Q ss_pred CeeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeec
Q psy3337 161 EIDDVDFSISGEQIVSIAKDGKAFVWNSKNGSLSKELKW 199 (297)
Q Consensus 161 ~v~~~~~sp~~~~l~s~~~d~~v~lwd~~~~~~~~~~~~ 199 (297)
.+.+++..++..++++-+.|+++++|++.+++++.+...
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~DL 277 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIEL 277 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEEC
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeech
Confidence 345566677888999999999999999999999887653
No 358
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=66.24 E-value=11 Score=34.57 Aligned_cols=36 Identities=11% Similarity=0.252 Sum_probs=29.7
Q ss_pred eeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeec
Q psy3337 162 IDDVDFSISGEQIVSIAKDGKAFVWNSKNGSLSKELKW 199 (297)
Q Consensus 162 v~~~~~sp~~~~l~s~~~d~~v~lwd~~~~~~~~~~~~ 199 (297)
|.++.+ +..++++-+.|.++|+|++.+++++.+...
T Consensus 224 Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 224 ISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred EEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 554444 467999999999999999999998887765
No 359
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=60.83 E-value=1e+02 Score=28.26 Aligned_cols=147 Identities=12% Similarity=0.043 Sum_probs=76.8
Q ss_pred cEEEEEEecCCCEEEEEcCCCcEEEEeCCCCeeeEEecc---ccCCeeEEEEccCCCEEEEEeCCCcEEEEEcCCCceee
Q psy3337 119 LQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEA---HSKEIDDVDFSISGEQIVSIAKDGKAFVWNSKNGSLSK 195 (297)
Q Consensus 119 ~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~---~~~~v~~~~~sp~~~~l~s~~~d~~v~lwd~~~~~~~~ 195 (297)
.|.++...++|++.+.++..+-+..+|..+++....... ....+.++....+|.+.+. +..| +..||..++...
T Consensus 473 ~i~~i~~d~~g~lWi~~~t~~Gl~~~d~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~lWig-t~~G-l~~~~~~~~~~~- 549 (758)
T 3ott_A 473 FINQIIPDNEGNVWVLLYNNKGIDKINPRTREVTKLFADELTGEKSPNYLLCDEDGLLWVG-FHGG-VMRINPKDESQQ- 549 (758)
T ss_dssp CEEEEEECTTSCEEEEETTCSSEEEEETTTTEEEEECTTTSCGGGCEEEEEECTTSCEEEE-ETTE-EEEECC--CCCC-
T ss_pred eeeeEEEcCCCCEEEEccCCCCcEEEeCCCCceEEecCCCcCCCcccceEEECCCCCEEEE-ecCc-eEEEecCCCceE-
Confidence 488888888888665444455688899877654332111 1245778888888877654 4444 888887655332
Q ss_pred eeeccC-CCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCCCceEEEeccCC-CeEEEEEc-CCC
Q psy3337 196 ELKWNT-PDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDSGRLRLAREMKE-SLSALAVR-DDG 272 (297)
Q Consensus 196 ~~~~~~-~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~-~v~~~~~s-~dg 272 (297)
.+.... |. ..+..+... +|...++. ..-|..+|..+.+... +.... .+....+. ++|
T Consensus 550 ~~~~~gl~~--------~~i~~i~~~-~g~lWi~t----------~~Gl~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~G 609 (758)
T 3ott_A 550 SISFGSFSN--------NEILSMTCV-KNSIWVST----------TNGLWIIDRKTMDARQ-QNMTNKRFTSLLFDPKED 609 (758)
T ss_dssp BCCCCC-----------CCEEEEEEE-TTEEEEEE----------SSCEEEEETTTCCEEE-C--CCCCCSEEEEETTTT
T ss_pred EecccCCCc--------cceEEEEEC-CCCEEEEC----------CCCeEEEcCCCceeEE-ecCCCCceeeeEEECCCC
Confidence 121110 11 111223333 56544432 3458888888765432 22112 23344444 455
Q ss_pred CEEEEEecCCCeEEEEEeC
Q psy3337 273 RFVAVGTMFTGSVFVYIAF 291 (297)
Q Consensus 273 ~~l~~~~~~dg~i~vwd~~ 291 (297)
. |..|+. +|. ..++..
T Consensus 610 ~-l~fG~~-~Gl-~~f~p~ 625 (758)
T 3ott_A 610 C-VYLGGA-DGF-GISHSN 625 (758)
T ss_dssp E-EEEECB-SEE-EEEEC-
T ss_pred c-EEEecC-Cce-EEEChh
Confidence 4 555565 664 445544
No 360
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=60.39 E-value=5.4 Score=39.03 Aligned_cols=33 Identities=6% Similarity=-0.070 Sum_probs=28.8
Q ss_pred eEEEEEcCCCCEEEEEecCCCeEEEEEeCCceec
Q psy3337 263 LSALAVRDDGRFVAVGTMFTGSVFVYIAFSLQMC 296 (297)
Q Consensus 263 v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~~~~~ 296 (297)
+.+++..++..+|++-+. |+++|+|++.+++++
T Consensus 240 ~vs~~~~~~~~~lftL~~-D~~LRiWsl~t~~~v 272 (1139)
T 4fhn_B 240 IISMIFLSTYNVLVMLSL-DYKLKVLDLSTNQCV 272 (1139)
T ss_dssp BSCCEEETTTTEEEEEBT-TCEEEEEETTTTEEE
T ss_pred eEEeeccCCccEEEEEeC-CCEEEEEECCCCCeE
Confidence 556667788899999999 999999999999875
No 361
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=55.20 E-value=16 Score=33.52 Aligned_cols=31 Identities=16% Similarity=0.173 Sum_probs=25.8
Q ss_pred eEEEEEcCCCCEEEEEecCCCeEEEEEeCCceec
Q psy3337 263 LSALAVRDDGRFVAVGTMFTGSVFVYIAFSLQMC 296 (297)
Q Consensus 263 v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~~~~~ 296 (297)
|.++.+ +..+|++-+. |.++|+|++.+++++
T Consensus 224 Is~~~~--~~~fLftL~~-Dh~LRiWsL~t~~lv 254 (729)
T 3f7f_A 224 ISCKLF--HERYLIVLTQ-NCHLKIWDLTSFTLI 254 (729)
T ss_dssp EEEEEE--TTTEEEEEET-TCEEEEEETTTTEEE
T ss_pred EEEecc--CCcEEEEEEc-CCeEEEEEcCCCceE
Confidence 555544 5789999999 999999999999865
No 362
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=41.41 E-value=2.1e+02 Score=26.23 Aligned_cols=72 Identities=14% Similarity=0.248 Sum_probs=39.8
Q ss_pred EEEEE-EecCCCEEEEE----c-CCCcEEEEeCCCCeeeE-Eec-cccC------CeeEEEEccCCCEEEEEe-------
Q psy3337 120 QRVVR-LSRNGDLMVTG----G-TDGHLRLWSFPKMKPLL-HIE-AHSK------EIDDVDFSISGEQIVSIA------- 178 (297)
Q Consensus 120 v~~~~-~s~~g~~l~s~----~-~d~~i~iwd~~~~~~~~-~~~-~~~~------~v~~~~~sp~~~~l~s~~------- 178 (297)
...+. ++|++++++.+ + .-..++++|+.+++.+. .|. .... ....++|..+..++++..
T Consensus 131 ~~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~~ 210 (711)
T 4hvt_A 131 YRGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEIT 210 (711)
T ss_dssp EEEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCBC
T ss_pred EeceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECCCEEEEEeCCCCCCcC
Confidence 34555 88999877643 2 22368999999988653 222 0000 113457764444444321
Q ss_pred ---CCCcEEEEEcCCC
Q psy3337 179 ---KDGKAFVWNSKNG 191 (297)
Q Consensus 179 ---~d~~v~lwd~~~~ 191 (297)
....|+.|.+-+.
T Consensus 211 ~~~~~~~v~~~~~Gt~ 226 (711)
T 4hvt_A 211 SSLYPNSLYIWKRGES 226 (711)
T ss_dssp TTSSBCEEEEEETTSC
T ss_pred cCCCCCEEEEEECCCC
Confidence 1245777876554
No 363
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=38.19 E-value=1.5e+02 Score=23.43 Aligned_cols=156 Identities=12% Similarity=0.053 Sum_probs=79.1
Q ss_pred cEEEEEEecCCCEEEEEcCCCcEEEE---eCCCCeeeEEeccccCCeeEEEEcc-CCCEEEEEeCCCcEEEEEcCCCc--
Q psy3337 119 LQRVVRLSRNGDLMVTGGTDGHLRLW---SFPKMKPLLHIEAHSKEIDDVDFSI-SGEQIVSIAKDGKAFVWNSKNGS-- 192 (297)
Q Consensus 119 ~v~~~~~s~~g~~l~s~~~d~~i~iw---d~~~~~~~~~~~~~~~~v~~~~~sp-~~~~l~s~~~d~~v~lwd~~~~~-- 192 (297)
.+..+........|+.-+.+|.++-- ++........+. ....|..+.... +..+++..+.+|.++...+....
T Consensus 25 ~~~~~~~~~t~~~ll~fT~~G~v~~~~~~~lp~~~~~~ll~-~~e~i~~v~~~~~~~~~~v~~T~~G~iKr~~l~~~~~~ 103 (276)
T 3no0_A 25 PVVNILRVPFTEGLFLVSNRGRVYWIAGSQALQGSKVSLKS-REEKIVGAFIREKFGNRLLLATKKGYVKKIPLAEFEYK 103 (276)
T ss_dssp CEEEEEEEETTSCEEEEETTSEEEEECSHHHHTSEECCCSS-TTCCEEEEEEGGGSCSEEEEEETTSEEEEEEGGGTTTC
T ss_pred eEEEEEEECCCCEEEEEcCCCeEEEEEhhhCccCcccccCC-CCCEEEEEECCcCCCCEEEEEeCCCEEEEEEHHHhhhh
Confidence 34444444444455555667766543 333221111133 344566654421 46789999999999998865432
Q ss_pred --eeeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEeccCcccccCCCCeEEEEeCCC---------CceEEEeccCC
Q psy3337 193 --LSKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLANPLAQNKRGISYVQQWDVDS---------GRLRLAREMKE 261 (297)
Q Consensus 193 --~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~---------~~~~~~~~~~~ 261 (297)
-+..+.....+ . +.. +........++..+. .|.+..+.... |.....+...+
T Consensus 104 ~~G~~~i~lkegD--~-l~~------~~~~~~~~~ill~T~--------~G~~~r~~~~eip~~gR~a~Gv~~i~L~~~d 166 (276)
T 3no0_A 104 AQGMPIIKLTEGD--E-VVS------IASSVDETHILLFTK--------KGRVARFSVREVPPSTPGARGVQGIKLEKND 166 (276)
T ss_dssp STTEECSCCCTTC--C-EEE------EEECCSSCEEEEEET--------TSEEEEEEGGGSCBCCTTCCCEECCCCCTTC
T ss_pred cCCeEEEecCCCC--E-EEE------EEEeCCCCEEEEEEC--------CCEEEEEEhhhCCCcCCCCCCEEEEccCCCC
Confidence 11111111111 1 111 111223334444433 67766665322 21222233334
Q ss_pred CeEEEEEcCCCCEEEEEecCCCeEEEEEeCCc
Q psy3337 262 SLSALAVRDDGRFVAVGTMFTGSVFVYIAFSL 293 (297)
Q Consensus 262 ~v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~~ 293 (297)
.|.++...+++..|+..+. .|.++...+...
T Consensus 167 ~vv~~~~~~~~~~ll~~T~-~G~~kr~~~~e~ 197 (276)
T 3no0_A 167 ETSGLRIWNGEPYLLVITA-KGRVKKISHEEI 197 (276)
T ss_dssp CEEEEEEESSCSEEEEEET-TSCEEEEEGGGS
T ss_pred EEEEEEEeCCCCEEEEEeC-CCcEEEeEHHHc
Confidence 4666665566678888888 999988887543
No 364
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=31.85 E-value=1.9e+02 Score=22.76 Aligned_cols=65 Identities=12% Similarity=0.193 Sum_probs=32.8
Q ss_pred cEEEEEEecCCCEEEEEcCCCcEEEEeCCCCeeeEEeccccCCeeEEEEccCCCEEEEEeCCCcEEEEEcC
Q psy3337 119 LQRVVRLSRNGDLMVTGGTDGHLRLWSFPKMKPLLHIEAHSKEIDDVDFSISGEQIVSIAKDGKAFVWNSK 189 (297)
Q Consensus 119 ~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~d~~v~lwd~~ 189 (297)
.|..++...... ++. . ||.|+.|=....-.+..-..-...|..++..... .+.-. ||.|+.|-..
T Consensus 64 ~i~~ia~G~~hs-~~l-~-~G~v~~wG~n~~Gqlg~P~~~~~~v~~ia~G~~h--s~al~-~G~v~~wG~n 128 (282)
T 3qhy_B 64 GVDAIAAGNYHS-LAL-K-DGEVIAWGGNEDGQTTVPAEARSGVDAIAAGAWA--SYALK-DGKVIAWGDD 128 (282)
T ss_dssp CCCEEEECSSEE-EEE-E-TTEEEEEECCTTSTTCCCGGGSSSEEEEEEETTE--EEEEE-TTEEEEEECC
T ss_pred CEEEEEeCCCEE-EEE-E-CCEEEEeeCCCCCCCCCCcccCCCeEEEECcCCE--EEEEe-CCeEEEecCC
Confidence 344555443322 222 3 7888888654321111000112357777765443 33334 8999999764
No 365
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=30.59 E-value=2.2e+02 Score=23.14 Aligned_cols=116 Identities=14% Similarity=0.102 Sum_probs=62.6
Q ss_pred CCeeEEE-Ecc--CCCEEEEEeCCCcEEEEEcCCCce-----eeeeeccCCCCceEEEEeeeeeeeeeCCCCeEEEEecc
Q psy3337 160 KEIDDVD-FSI--SGEQIVSIAKDGKAFVWNSKNGSL-----SKELKWNTPDNIKYLFKRCRYGLVEDSPKRSRLFTLAN 231 (297)
Q Consensus 160 ~~v~~~~-~sp--~~~~l~s~~~d~~v~lwd~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~ 231 (297)
..|.++. +.. +..+++..+.+|.++--.+..... +..+.....+ .+ ... ...+.+ ..|+..+.
T Consensus 95 e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke~D--~l-v~~-----~~~~~~-d~ill~T~ 165 (327)
T 3uc1_A 95 ERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRDND--EL-VGA-----VLCSAG-DDLLLVSA 165 (327)
T ss_dssp CCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCTTC--CE-EEE-----EEECTT-CEEEEEET
T ss_pred CEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECCCC--EE-EEE-----EEecCC-CEEEEEEC
Confidence 3455443 332 577999999999999887653221 1111111111 11 110 111222 33444333
Q ss_pred CcccccCCCCeEEEEeCC--C---------CceEEEeccCCCeEEEEEcCCCCEEEEEecCCCeEEEEEeCCc
Q psy3337 232 PLAQNKRGISYVQQWDVD--S---------GRLRLAREMKESLSALAVRDDGRFVAVGTMFTGSVFVYIAFSL 293 (297)
Q Consensus 232 ~~~~~g~~d~~i~~wd~~--~---------~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~~ 293 (297)
.|.+..+... . |.....+...+.|.++...+++.+|+..+. .|.++.-.+...
T Consensus 166 --------~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~-~G~~Krt~l~e~ 229 (327)
T 3uc1_A 166 --------NGQSIRFSATDEALRPMGRATSGVQGMRFNIDDRLLSLNVVREGTYLLVATS-GGYAKRTAIEEY 229 (327)
T ss_dssp --------TSEEEEEECCTTTSCCCCTTSBCEESSCCCTTCCEEEEEECCTTCEEEEEET-TSEEEEEEGGGS
T ss_pred --------CCeEEEEECcccccCcCCcCCCCeeeecCCCCCEEEEEEEECCCCEEEEEeC-CCcEEEEEHHHc
Confidence 6777666655 2 111112333344777766666778899998 999988876543
No 366
>4eqa_C PA1845 protein, putative uncharacterized protein; type VI secretion, T6S, antitoxin-toxin complex, unknown FUN; 1.60A {Pseudomonas aeruginosa} PDB: 4fgi_B
Probab=26.93 E-value=1.4e+02 Score=19.57 Aligned_cols=15 Identities=7% Similarity=0.228 Sum_probs=9.8
Q ss_pred EEeccCCceeeEEEe
Q psy3337 14 VVAGQENSNQLYKIT 28 (297)
Q Consensus 14 ~~~g~d~~~~~~~~~ 28 (297)
.-+|.|.++|+.--+
T Consensus 19 mfggedehvrvmfsn 33 (153)
T 4eqa_C 19 MFGGEDEHVRVMFSN 33 (153)
T ss_dssp EEEEECSSEEEEEEC
T ss_pred ccCCccceEEEEecc
Confidence 346778888875433
No 367
>3vpj_E TSE1-specific immunity protein; hydrolase-hydrolase inhibitor complex; 2.50A {Pseudomonas aeruginosa}
Probab=26.30 E-value=1.5e+02 Score=20.04 Aligned_cols=30 Identities=23% Similarity=0.293 Sum_probs=15.0
Q ss_pred EEEEecCCCEEEE---EcCCCcEEEEeCCCCee
Q psy3337 122 VVRLSRNGDLMVT---GGTDGHLRLWSFPKMKP 151 (297)
Q Consensus 122 ~~~~s~~g~~l~s---~~~d~~i~iwd~~~~~~ 151 (297)
.+-++.||+.++. .+....+.-||..+-+.
T Consensus 111 gvflsqdgrrvlmhefsgssaelvsydsatckv 143 (192)
T 3vpj_E 111 GVFLSQDGRRVLMHEFSGSSAELVSYDSATCKV 143 (192)
T ss_dssp EEEEETTSSEEEEEEEETTEEEEEEEETTTCCE
T ss_pred cEEEecCCceeeeeeccCCchheeeccCceeEE
Confidence 4556677765542 22233445566555443
No 368
>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1
Probab=24.71 E-value=1.6e+02 Score=19.66 Aligned_cols=14 Identities=21% Similarity=0.233 Sum_probs=8.7
Q ss_pred eEEEEEcCCCCEEE
Q psy3337 263 LSALAVRDDGRFVA 276 (297)
Q Consensus 263 v~~~~~s~dg~~l~ 276 (297)
...+.+.++|.+++
T Consensus 94 ~~~l~l~~~Gnlvl 107 (119)
T 1b2p_A 94 HYVLVLQPDRNVVI 107 (119)
T ss_dssp CEEEEECTTSCEEE
T ss_pred CEEEEEECCCcEEE
Confidence 45566777777544
No 369
>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A*
Probab=23.07 E-value=1.6e+02 Score=19.20 Aligned_cols=24 Identities=21% Similarity=0.167 Sum_probs=14.2
Q ss_pred eEEEEEcCCCCEEEEEecCCCeEEEEEeCC
Q psy3337 263 LSALAVRDDGRFVAVGTMFTGSVFVYIAFS 292 (297)
Q Consensus 263 v~~~~~s~dg~~l~~~~~~dg~i~vwd~~~ 292 (297)
...+.+.++|.+++. ++ .+|...+
T Consensus 84 ~~~l~l~~dGnlvl~----~~--~~W~S~~ 107 (110)
T 3a0c_A 84 HYVLVLQQDRNVVIY----GP--VVWATGS 107 (110)
T ss_dssp CCEEEECTTSCEEEE----CS--EEEECSC
T ss_pred CEEEEEeCCccEEEE----CC--CEecCCC
Confidence 456777788876552 33 4676543
No 370
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=21.40 E-value=3.6e+02 Score=22.51 Aligned_cols=165 Identities=10% Similarity=0.041 Sum_probs=90.1
Q ss_pred eEEE-EeeCC--CeEEEEecC-----CCCcEEEEEEe---cC----CCEE-EEEcCCCcEEEEeCCCCeeeEEec-----
Q psy3337 98 NLRF-GFKTF--DSVQTVFAG-----SESLQRVVRLS---RN----GDLM-VTGGTDGHLRLWSFPKMKPLLHIE----- 156 (297)
Q Consensus 98 ~i~~-~~~~~--~~~~~~~~~-----h~~~v~~~~~s---~~----g~~l-~s~~~d~~i~iwd~~~~~~~~~~~----- 156 (297)
.|.+ |+.++ +.++.+.-. ....+..+.+. |+ +.++ ++=.....|.++|+.+++.-+.+.
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~p 203 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKA 203 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSC
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCcc
Confidence 3444 99998 888777511 24567888888 22 2232 333456789999998877544331
Q ss_pred ---------cc----cCCeeEEEEccC----CCEEEEEeCCCcEEEEEcC-----CCce---eeeeeccCCCCceEEEEe
Q psy3337 157 ---------AH----SKEIDDVDFSIS----GEQIVSIAKDGKAFVWNSK-----NGSL---SKELKWNTPDNIKYLFKR 211 (297)
Q Consensus 157 ---------~~----~~~v~~~~~sp~----~~~l~s~~~d~~v~lwd~~-----~~~~---~~~~~~~~~~~~~~~~~~ 211 (297)
+. ...+..|+++|+ ++.|+-....+. ++|.+. .... +..+....+.
T Consensus 204 d~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~-~ly~V~T~~L~~~~~~~~v~~~G~kg~~-------- 274 (381)
T 3q6k_A 204 ERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAI-KVYSVNTKELKQKGGKLNPELLGNRGKY-------- 274 (381)
T ss_dssp CSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCS-EEEEEEHHHHSSTTCCCCCEEEEECCTT--------
T ss_pred ccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCC-cEEEEEHHHhhCcchhhceEEeeecCCC--------
Confidence 10 136778888887 666666554432 334332 2111 1111000000
Q ss_pred eeeeeeeeC-CCCeEEEEeccCcccccCCCCeEEEEeCCCC----ceEEEeccCCC---eEEEEEcCCCCEEEEEe
Q psy3337 212 CRYGLVEDS-PKRSRLFTLANPLAQNKRGISYVQQWDVDSG----RLRLAREMKES---LSALAVRDDGRFVAVGT 279 (297)
Q Consensus 212 ~~~~~~~~s-~~~~~l~~~~~~~~~~g~~d~~i~~wd~~~~----~~~~~~~~~~~---v~~~~~s~dg~~l~~~~ 279 (297)
..-..++.. .+|..+++.-. ...|..|+..+. +....+..... +..+.+.++|.+-+...
T Consensus 275 s~~~~~~~D~~~G~ly~~~~~--------~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~~g~Lwv~sn 342 (381)
T 3q6k_A 275 NDAIALAYDPKTKVIFFAEAN--------TKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDSKGGLWFMSN 342 (381)
T ss_dssp CCEEEEEECTTTCEEEEEESS--------SSEEEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECTTSCEEEEEC
T ss_pred CCcceEEEeCCCCeEEEEecc--------CCeEEEEeCCCCccccCceEEEEECCCccccCeEEECCCCeEEEEEC
Confidence 001123454 56766666544 789999998751 12222222223 78888887876555443
No 371
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=20.17 E-value=4.3e+02 Score=22.94 Aligned_cols=50 Identities=12% Similarity=0.106 Sum_probs=32.3
Q ss_pred cCCCCeEEEEeCCC-Cc-------eEEEec---cCCCeEEEEEcCCCCEEEEEecCCCeEEE
Q psy3337 237 KRGISYVQQWDVDS-GR-------LRLARE---MKESLSALAVRDDGRFVAVGTMFTGSVFV 287 (297)
Q Consensus 237 g~~d~~i~~wd~~~-~~-------~~~~~~---~~~~v~~~~~s~dg~~l~~~~~~dg~i~v 287 (297)
|+.+|.|.-.-+.. +. .+..+. ...+|..|.++++..+|.+++. ++.++|
T Consensus 427 GT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~-~~V~~v 487 (495)
T 1q47_A 427 GTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGST-AGVAQL 487 (495)
T ss_dssp EETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBS-SCEEEE
T ss_pred eCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEEC-CeEEEE
Confidence 77788776554432 11 222333 2345999999999999999997 665554
Done!