Query psy3338
Match_columns 152
No_of_seqs 150 out of 1721
Neff 11.2
Searched_HMMs 46136
Date Fri Aug 16 22:23:59 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3338.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/3338hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4412|consensus 100.0 1.2E-29 2.6E-34 154.2 5.8 126 21-148 38-166 (226)
2 KOG4412|consensus 100.0 1.2E-28 2.6E-33 149.9 8.7 136 12-149 63-200 (226)
3 PHA02791 ankyrin-like protein; 99.9 1.9E-25 4.2E-30 149.6 12.6 127 21-148 61-221 (284)
4 KOG0508|consensus 99.9 1.1E-26 2.3E-31 159.3 5.6 130 20-150 82-212 (615)
5 PHA02791 ankyrin-like protein; 99.9 8.3E-25 1.8E-29 146.6 12.1 128 15-146 24-153 (284)
6 PHA02875 ankyrin repeat protei 99.9 8.6E-25 1.9E-29 154.6 12.8 127 20-148 101-229 (413)
7 PHA02875 ankyrin repeat protei 99.9 9E-25 1.9E-29 154.5 12.3 120 28-148 74-195 (413)
8 PHA02743 Viral ankyrin protein 99.9 1.2E-24 2.5E-29 136.2 10.4 127 21-149 20-156 (166)
9 KOG0509|consensus 99.9 4.7E-25 1E-29 155.6 8.6 127 21-148 77-205 (600)
10 PHA02878 ankyrin repeat protei 99.9 6E-24 1.3E-28 152.7 12.5 128 18-149 164-295 (477)
11 PHA02884 ankyrin repeat protei 99.9 6.3E-24 1.4E-28 142.6 11.3 119 17-136 28-152 (300)
12 PHA02878 ankyrin repeat protei 99.9 6.9E-24 1.5E-28 152.4 11.6 106 42-148 155-262 (477)
13 PHA02859 ankyrin repeat protei 99.9 1.2E-23 2.6E-28 136.1 11.5 131 17-149 47-187 (209)
14 PHA03100 ankyrin repeat protei 99.9 1.3E-23 2.9E-28 151.0 11.9 127 20-148 175-310 (480)
15 PHA02741 hypothetical protein; 99.9 9.8E-24 2.1E-28 132.5 9.8 128 18-147 18-158 (169)
16 PHA02874 ankyrin repeat protei 99.9 2.6E-23 5.7E-28 147.8 13.1 128 19-148 33-184 (434)
17 PHA02874 ankyrin repeat protei 99.9 2.7E-23 5.9E-28 147.8 13.2 130 18-149 65-218 (434)
18 PHA02859 ankyrin repeat protei 99.9 2E-23 4.4E-28 135.0 10.2 128 18-149 18-153 (209)
19 KOG0509|consensus 99.9 3.2E-24 6.9E-29 151.5 6.9 129 20-150 111-241 (600)
20 PLN03192 Voltage-dependent pot 99.9 3.4E-23 7.3E-28 156.6 12.0 126 22-149 526-683 (823)
21 PHA03100 ankyrin repeat protei 99.9 4.7E-23 1E-27 148.2 10.9 129 18-148 65-203 (480)
22 PHA02716 CPXV016; CPX019; EVM0 99.9 1E-22 2.3E-27 150.3 12.4 129 18-148 209-393 (764)
23 PHA03095 ankyrin-like protein; 99.9 1.4E-22 3E-27 145.5 11.8 133 15-149 41-182 (471)
24 PHA02946 ankyin-like protein; 99.9 1.8E-22 4E-27 143.5 11.5 132 14-148 65-202 (446)
25 PHA03095 ankyrin-like protein; 99.9 3.5E-22 7.6E-27 143.4 12.5 130 18-148 184-317 (471)
26 PHA02716 CPXV016; CPX019; EVM0 99.9 2.3E-22 4.9E-27 148.5 11.5 130 18-149 174-347 (764)
27 PHA02876 ankyrin repeat protei 99.9 5.1E-22 1.1E-26 148.0 12.4 131 18-149 338-471 (682)
28 KOG0508|consensus 99.9 3.1E-23 6.8E-28 142.5 5.3 119 22-143 118-237 (615)
29 PHA02736 Viral ankyrin protein 99.9 1.2E-22 2.7E-27 125.7 7.1 129 18-148 14-153 (154)
30 PHA02798 ankyrin-like protein; 99.9 4.4E-22 9.5E-27 143.4 10.5 130 19-149 34-176 (489)
31 PHA02989 ankyrin repeat protei 99.9 6.5E-22 1.4E-26 142.7 11.4 129 19-149 33-175 (494)
32 PHA02798 ankyrin-like protein; 99.9 8.9E-22 1.9E-26 141.9 11.9 78 17-95 105-189 (489)
33 PHA02795 ankyrin-like protein; 99.9 8.2E-22 1.8E-26 137.5 11.2 126 22-149 150-290 (437)
34 KOG0510|consensus 99.9 2.9E-22 6.2E-27 145.1 8.9 129 18-148 270-404 (929)
35 KOG0502|consensus 99.9 1.3E-22 2.9E-27 127.3 6.2 130 11-143 150-280 (296)
36 PHA02989 ankyrin repeat protei 99.9 2E-21 4.4E-26 140.2 11.9 57 89-145 257-313 (494)
37 PHA02946 ankyin-like protein; 99.9 2.5E-21 5.4E-26 137.7 12.1 126 22-149 38-168 (446)
38 PF12796 Ank_2: Ankyrin repeat 99.9 1.2E-20 2.7E-25 106.5 11.2 88 58-150 1-88 (89)
39 PHA02917 ankyrin-like protein; 99.9 2.6E-21 5.7E-26 142.7 10.4 125 23-148 104-257 (661)
40 PHA02876 ankyrin repeat protei 99.9 9.3E-21 2E-25 141.3 12.7 129 18-148 270-402 (682)
41 KOG0512|consensus 99.8 5.7E-21 1.2E-25 116.0 7.7 117 24-141 65-184 (228)
42 PHA02795 ankyrin-like protein; 99.8 1.5E-20 3.2E-25 131.3 10.2 128 19-149 114-249 (437)
43 KOG4177|consensus 99.8 1.1E-20 2.3E-25 143.0 9.4 119 27-146 512-631 (1143)
44 PHA02917 ankyrin-like protein; 99.8 3.4E-20 7.5E-25 136.8 10.6 139 7-148 18-165 (661)
45 PHA02730 ankyrin-like protein; 99.8 4.8E-20 1E-24 134.3 10.9 129 19-148 376-525 (672)
46 PF12796 Ank_2: Ankyrin repeat 99.8 1.6E-20 3.5E-25 106.0 6.1 88 26-118 1-89 (89)
47 KOG0195|consensus 99.8 1.6E-20 3.5E-25 122.6 6.4 130 17-148 30-160 (448)
48 KOG0502|consensus 99.8 3.4E-20 7.4E-25 116.6 6.8 104 46-150 152-255 (296)
49 PHA02730 ankyrin-like protein; 99.8 1.3E-19 2.7E-24 132.2 9.7 129 18-148 38-182 (672)
50 KOG4177|consensus 99.8 1.2E-19 2.5E-24 137.5 9.7 131 18-150 471-602 (1143)
51 KOG0514|consensus 99.8 4E-20 8.7E-25 123.7 6.1 126 15-142 262-394 (452)
52 KOG0195|consensus 99.8 1.6E-19 3.6E-24 118.0 7.8 121 27-148 6-127 (448)
53 KOG0510|consensus 99.8 2E-19 4.3E-24 130.6 8.3 128 19-148 223-368 (929)
54 PHA02741 hypothetical protein; 99.8 1.5E-18 3.4E-23 108.9 11.0 102 47-149 14-127 (169)
55 cd00204 ANK ankyrin repeats; 99.8 1.5E-18 3.2E-23 103.3 10.5 121 19-141 5-126 (126)
56 PHA02743 Viral ankyrin protein 99.8 1.6E-18 3.4E-23 108.5 9.1 106 43-149 9-123 (166)
57 PHA02792 ankyrin-like protein; 99.8 1.2E-18 2.7E-23 126.0 9.5 126 22-148 339-480 (631)
58 KOG0512|consensus 99.8 1E-18 2.2E-23 106.3 7.1 115 17-133 93-210 (228)
59 PLN03192 Voltage-dependent pot 99.8 3.6E-18 7.7E-23 129.6 10.5 120 11-132 548-700 (823)
60 KOG4214|consensus 99.8 3.3E-19 7.2E-24 97.5 3.4 102 26-129 6-108 (117)
61 PHA02792 ankyrin-like protein; 99.8 2.1E-18 4.6E-23 124.8 7.8 127 16-143 66-239 (631)
62 PHA02884 ankyrin repeat protei 99.8 2.2E-17 4.8E-22 111.2 11.8 101 48-149 26-132 (300)
63 KOG0514|consensus 99.8 1.7E-18 3.8E-23 116.0 5.8 90 53-143 339-429 (452)
64 TIGR00870 trp transient-recept 99.7 3.9E-18 8.4E-23 128.4 6.5 124 19-144 126-280 (743)
65 KOG0505|consensus 99.7 7.6E-18 1.6E-22 117.5 6.3 136 13-150 65-260 (527)
66 KOG3676|consensus 99.7 3.8E-17 8.3E-22 118.8 7.5 123 19-143 182-330 (782)
67 cd00204 ANK ankyrin repeats; 99.7 8.4E-16 1.8E-20 91.4 12.2 99 49-148 2-100 (126)
68 COG0666 Arp FOG: Ankyrin repea 99.7 3.7E-16 8E-21 101.9 10.5 122 21-144 73-203 (235)
69 TIGR00870 trp transient-recept 99.7 3.9E-16 8.4E-21 117.7 11.2 61 88-148 128-202 (743)
70 PHA02736 Viral ankyrin protein 99.7 5.5E-17 1.2E-21 100.5 5.3 96 18-115 52-153 (154)
71 KOG4214|consensus 99.7 4.7E-16 1E-20 85.2 7.9 92 56-149 4-95 (117)
72 KOG0507|consensus 99.7 1.2E-16 2.5E-21 115.7 6.4 127 15-143 43-170 (854)
73 PTZ00322 6-phosphofructo-2-kin 99.7 3.5E-16 7.6E-21 116.2 8.1 101 26-127 86-194 (664)
74 PF13857 Ank_5: Ankyrin repeat 99.6 4.8E-16 1E-20 79.9 4.7 55 40-95 1-56 (56)
75 PTZ00322 6-phosphofructo-2-kin 99.6 4.5E-15 9.8E-20 110.4 11.4 87 56-143 84-170 (664)
76 PF13637 Ank_4: Ankyrin repeat 99.6 4.1E-15 8.9E-20 75.9 6.5 53 89-141 2-54 (54)
77 PF13637 Ank_4: Ankyrin repeat 99.6 5.8E-15 1.3E-19 75.4 6.5 54 54-108 1-54 (54)
78 KOG1710|consensus 99.6 4.6E-15 9.9E-20 97.2 6.9 122 21-143 12-134 (396)
79 KOG0505|consensus 99.6 5.9E-15 1.3E-19 103.3 7.0 128 21-149 39-226 (527)
80 KOG0515|consensus 99.6 4.3E-15 9.3E-20 104.2 6.0 117 25-142 553-673 (752)
81 KOG0507|consensus 99.6 3.6E-15 7.7E-20 108.2 5.4 121 27-148 8-142 (854)
82 PF13857 Ank_5: Ankyrin repeat 99.6 5.5E-15 1.2E-19 75.9 4.6 55 73-128 1-56 (56)
83 KOG0515|consensus 99.5 2E-13 4.3E-18 96.0 8.3 89 59-148 555-643 (752)
84 KOG4369|consensus 99.5 1.2E-14 2.6E-19 109.6 1.3 128 22-150 758-886 (2131)
85 COG0666 Arp FOG: Ankyrin repea 99.5 2.2E-12 4.7E-17 84.0 11.5 101 48-149 67-175 (235)
86 KOG3676|consensus 99.4 4.6E-12 1E-16 93.0 8.7 126 21-146 143-298 (782)
87 KOG0818|consensus 99.3 7.5E-12 1.6E-16 87.6 7.3 93 57-149 136-228 (669)
88 KOG4369|consensus 99.3 8.7E-13 1.9E-17 99.9 2.4 141 9-151 778-922 (2131)
89 KOG0783|consensus 99.2 1.1E-11 2.3E-16 91.6 3.4 84 47-130 45-128 (1267)
90 KOG1710|consensus 99.2 2.1E-10 4.7E-15 75.6 8.5 94 54-148 12-106 (396)
91 KOG0506|consensus 99.2 8E-11 1.7E-15 82.2 5.9 93 52-145 504-597 (622)
92 PF13606 Ank_3: Ankyrin repeat 99.1 3E-10 6.5E-15 50.4 3.8 28 54-81 2-29 (30)
93 KOG0506|consensus 99.1 7.6E-11 1.6E-15 82.3 2.1 86 26-112 510-597 (622)
94 PF13606 Ank_3: Ankyrin repeat 99.0 4.8E-10 1E-14 49.7 3.4 28 121-148 2-29 (30)
95 KOG0782|consensus 99.0 6.3E-10 1.4E-14 79.6 5.7 116 27-143 871-989 (1004)
96 PF00023 Ank: Ankyrin repeat H 99.0 1.4E-09 3E-14 49.4 4.3 31 54-84 2-32 (33)
97 KOG0818|consensus 98.9 1.5E-09 3.3E-14 76.3 5.1 85 25-110 136-222 (669)
98 PF00023 Ank: Ankyrin repeat H 98.8 1.1E-08 2.4E-13 46.4 4.4 30 89-118 3-32 (33)
99 KOG0705|consensus 98.8 2.3E-08 4.9E-13 71.8 7.9 90 58-147 628-720 (749)
100 KOG0705|consensus 98.8 5.3E-09 1.1E-13 74.9 4.5 86 28-114 630-720 (749)
101 KOG0522|consensus 98.8 2.3E-08 4.9E-13 71.0 6.3 85 24-109 22-109 (560)
102 KOG0522|consensus 98.7 7.7E-08 1.7E-12 68.4 7.7 87 56-143 22-110 (560)
103 KOG2384|consensus 98.7 8.6E-08 1.9E-12 59.8 6.7 69 44-113 2-71 (223)
104 KOG0511|consensus 98.7 2.3E-08 5E-13 68.5 4.5 62 26-87 40-102 (516)
105 KOG0782|consensus 98.7 2.3E-08 5E-13 71.9 3.9 91 19-110 896-989 (1004)
106 KOG0511|consensus 98.6 2.4E-07 5.3E-12 63.6 7.9 69 57-126 39-107 (516)
107 KOG3609|consensus 98.6 1.1E-07 2.3E-12 71.0 5.5 119 22-148 25-158 (822)
108 KOG0521|consensus 98.6 8.9E-08 1.9E-12 72.5 4.8 88 53-141 655-742 (785)
109 KOG0783|consensus 98.5 4E-08 8.8E-13 73.4 2.3 69 80-149 45-114 (1267)
110 KOG2384|consensus 98.3 3.2E-06 6.8E-11 53.0 6.4 67 78-145 3-70 (223)
111 KOG0520|consensus 98.2 9.3E-07 2E-11 67.5 1.9 123 18-143 571-702 (975)
112 KOG0521|consensus 98.0 2.3E-06 5E-11 65.1 1.8 89 17-107 652-741 (785)
113 KOG0520|consensus 97.7 3E-05 6.5E-10 59.6 3.1 95 52-148 572-668 (975)
114 smart00248 ANK ankyrin repeats 97.6 0.00022 4.7E-09 30.1 3.8 26 54-79 2-27 (30)
115 smart00248 ANK ankyrin repeats 97.5 0.00019 4.1E-09 30.3 3.5 27 121-147 2-28 (30)
116 KOG2505|consensus 97.5 0.00035 7.5E-09 50.2 6.2 62 67-129 404-471 (591)
117 KOG2505|consensus 97.5 0.00011 2.3E-09 52.7 3.6 75 21-96 389-471 (591)
118 KOG3609|consensus 97.3 0.00042 9.1E-09 52.6 4.7 89 27-122 67-165 (822)
119 PF06128 Shigella_OspC: Shigel 96.9 0.0091 2E-07 39.0 7.1 94 55-148 180-281 (284)
120 PF03158 DUF249: Multigene fam 93.9 0.12 2.5E-06 32.9 3.7 45 92-142 147-191 (192)
121 PF11929 DUF3447: Domain of un 93.2 0.29 6.2E-06 26.4 4.2 48 55-110 7-54 (76)
122 PF11929 DUF3447: Domain of un 91.6 0.55 1.2E-05 25.3 4.0 48 89-143 7-54 (76)
123 PF06128 Shigella_OspC: Shigel 89.3 1.8 4E-05 28.8 5.5 50 64-114 227-280 (284)
124 PF03158 DUF249: Multigene fam 81.4 5.2 0.00011 25.7 4.5 45 58-109 147-191 (192)
125 KOG1709|consensus 66.0 12 0.00026 25.0 3.5 40 40-79 1-40 (271)
126 KOG3836|consensus 64.6 3.3 7.2E-05 31.4 0.9 51 29-79 403-454 (605)
127 KOG1709|consensus 57.7 12 0.00026 25.0 2.5 41 73-114 1-41 (271)
128 KOG4591|consensus 44.2 24 0.00052 23.2 2.2 45 89-133 223-272 (280)
129 KOG3836|consensus 35.4 9.6 0.00021 29.2 -0.6 52 63-115 405-456 (605)
130 PF04405 ScdA_N: Domain of Unk 28.0 92 0.002 15.7 3.7 34 100-136 12-45 (56)
131 TIGR00847 ccoS cytochrome oxid 22.3 85 0.0018 15.6 1.6 14 25-38 21-35 (51)
132 PF03597 CcoS: Cytochrome oxid 20.6 97 0.0021 14.9 1.6 14 25-38 20-34 (45)
133 PF12645 HTH_16: Helix-turn-he 20.2 1.5E+02 0.0033 15.4 2.5 20 57-76 2-21 (65)
No 1
>KOG4412|consensus
Probab=99.96 E-value=1.2e-29 Score=154.25 Aligned_cols=126 Identities=36% Similarity=0.447 Sum_probs=69.7
Q ss_pred CChhHHHHHHHcCCCC-CCCcC-CCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhc-CCCCCccccCCCcCHHHHHHH
Q psy3338 21 EHIPLTIILLTTGRYP-PGHLP-ICSVDPNIPDNAGYTALHYAARSNNKPICLLLISR-GANVNAVTRAGQATPLHRAAS 97 (152)
Q Consensus 21 ~~~~~~~~a~~~g~~~-v~~Ll-~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~-~~~~~~~~~~~~~~~l~~a~~ 97 (152)
+.+|+ |+|+..|+.+ +++|+ +.+..+|.+|..|+||||+|+..|+.++++-|+.+ |++++...+.| .|+||+|+.
T Consensus 38 ~Rt~L-Hwa~S~g~~eiv~fLlsq~nv~~ddkDdaGWtPlhia~s~g~~evVk~Ll~r~~advna~tn~G-~T~LHyAag 115 (226)
T KOG4412|consen 38 GRTPL-HWACSFGHVEIVYFLLSQPNVKPDDKDDAGWTPLHIAASNGNDEVVKELLNRSGADVNATTNGG-QTCLHYAAG 115 (226)
T ss_pred CCcee-eeeeecCchhHHHHHHhcCCCCCCCccccCCchhhhhhhcCcHHHHHHHhcCCCCCcceecCCC-cceehhhhc
Confidence 44444 3455555555 55555 34555555555555555555555555555555555 55555555444 555555555
Q ss_pred cCCHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHhCCccc
Q psy3338 98 AANEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKISQILLERFSDLQ 148 (152)
Q Consensus 98 ~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~~~~ 148 (152)
.|+.++.++|++.|+.+..+|..|+||||.|+..|..+++++|+..|+.++
T Consensus 116 K~r~eIaqlLle~ga~i~~kD~~~qtplHRAAavGklkvie~Li~~~a~~n 166 (226)
T KOG4412|consen 116 KGRLEIAQLLLEKGALIRIKDKQGQTPLHRAAAVGKLKVIEYLISQGAPLN 166 (226)
T ss_pred CChhhHHHHHHhcCCCCcccccccCchhHHHHhccchhhHHHHHhcCCCCC
Confidence 555555555555555555555555555555555555555555555555544
No 2
>KOG4412|consensus
Probab=99.96 E-value=1.2e-28 Score=149.93 Aligned_cols=136 Identities=29% Similarity=0.392 Sum_probs=125.5
Q ss_pred CCCccccCCCChhHHHHHHHcCCCC-CCCcCCC-CCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCc
Q psy3338 12 LPTCKPILPEHIPLTIILLTTGRYP-PGHLPIC-SVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQA 89 (152)
Q Consensus 12 ~~~~~~~~~~~~~~~~~a~~~g~~~-v~~Ll~~-~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~ 89 (152)
.+.......||+|+ |.|+..|+.+ |+.|+.+ |+|+|..+..|.|+||||+-.|..++.++|+++|+.++.+|..+ .
T Consensus 63 v~~ddkDdaGWtPl-hia~s~g~~evVk~Ll~r~~advna~tn~G~T~LHyAagK~r~eIaqlLle~ga~i~~kD~~~-q 140 (226)
T KOG4412|consen 63 VKPDDKDDAGWTPL-HIAASNGNDEVVKELLNRSGADVNATTNGGQTCLHYAAGKGRLEIAQLLLEKGALIRIKDKQG-Q 140 (226)
T ss_pred CCCCCccccCCchh-hhhhhcCcHHHHHHHhcCCCCCcceecCCCcceehhhhcCChhhHHHHHHhcCCCCccccccc-C
Confidence 33444567799999 5578888888 9999988 99999999999999999999999999999999999999999999 8
Q ss_pred CHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHhCCcccc
Q psy3338 90 TPLHRAASAANEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKISQILLERFSDLQT 149 (152)
Q Consensus 90 ~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~~~~~ 149 (152)
||||-|+..|..+++++|+..|+.++..|.+|+||||.|...++.++...|+++|+++.-
T Consensus 141 tplHRAAavGklkvie~Li~~~a~~n~qDk~G~TpL~~al~e~~~d~a~lLV~~gAd~~~ 200 (226)
T KOG4412|consen 141 TPLHRAAAVGKLKVIEYLISQGAPLNTQDKYGFTPLHHALAEGHPDVAVLLVRAGADTDR 200 (226)
T ss_pred chhHHHHhccchhhHHHHHhcCCCCCcccccCccHHHHHHhccCchHHHHHHHhccceee
Confidence 999999999999999999999999999999999999999999999999999999998763
No 3
>PHA02791 ankyrin-like protein; Provisional
Probab=99.93 E-value=1.9e-25 Score=149.63 Aligned_cols=127 Identities=19% Similarity=0.193 Sum_probs=72.7
Q ss_pred CChhHHHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCC------------
Q psy3338 21 EHIPLTIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAG------------ 87 (152)
Q Consensus 21 ~~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~------------ 87 (152)
+.||+ +.|+..|+.+ +++|+..|++++.+|..|.||||+|+..|+.+++++|+.+|++++..+..+
T Consensus 61 ~~TpL-h~Aa~~g~~eiV~lLL~~Gadvn~~d~~G~TpLh~Aa~~g~~eivk~Ll~~gadin~~~~~g~~TpL~~Aa~~g 139 (284)
T PHA02791 61 NEFPL-HQAATLEDTKIVKILLFSGMDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLN 139 (284)
T ss_pred CCCHH-HHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccCCCCCcHHHHHHHHcC
Confidence 44554 3355556655 666666666666666666666666666666666666666555554433332
Q ss_pred --------------------CcCHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCcH-HHHHHhcCcHHHHHHHHHhCCc
Q psy3338 88 --------------------QATPLHRAASAANEEIVTLLLDNGADSTLKDSDGLTA-LDRSRKESHEKISQILLERFSD 146 (152)
Q Consensus 88 --------------------~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~-l~~a~~~~~~~i~~~L~~~~~~ 146 (152)
+.||||+|+..|+.+++++|+++|++++.++..|.|| ||+|+..|+.+++++|+++|++
T Consensus 140 ~~eivk~LL~~~~~~~d~~~g~TpLh~Aa~~g~~eiv~lLL~~gAd~n~~d~~g~t~~L~~Aa~~~~~e~v~lLl~~Ga~ 219 (284)
T PHA02791 140 DVSIVSYFLSEIPSTFDLAILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDLEMLQALFKYDIN 219 (284)
T ss_pred CHHHHHHHHhcCCcccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHCCCC
Confidence 1455555555555555565555555555555555544 5666666666666666666655
Q ss_pred cc
Q psy3338 147 LQ 148 (152)
Q Consensus 147 ~~ 148 (152)
++
T Consensus 220 in 221 (284)
T PHA02791 220 IY 221 (284)
T ss_pred Cc
Confidence 54
No 4
>KOG0508|consensus
Probab=99.93 E-value=1.1e-26 Score=159.33 Aligned_cols=130 Identities=25% Similarity=0.246 Sum_probs=122.8
Q ss_pred CCChhHHHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHHHc
Q psy3338 20 PEHIPLTIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAASA 98 (152)
Q Consensus 20 ~~~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~~ 98 (152)
-.+.|.++.|+..|+++ |+.|+.+|+++|.....+.|||..||.-|+.++++||+++|++++..++.| .|.|++||..
T Consensus 82 IegappLWaAsaAGHl~vVk~L~~~ga~VN~tT~TNStPLraACfDG~leivKyLvE~gad~~IanrhG-hTcLmIa~yk 160 (615)
T KOG0508|consen 82 IEGAPPLWAASAAGHLEVVKLLLRRGASVNDTTRTNSTPLRAACFDGHLEIVKYLVEHGADPEIANRHG-HTCLMIACYK 160 (615)
T ss_pred cCCCchhhHHhccCcHHHHHHHHHhcCccccccccCCccHHHHHhcchhHHHHHHHHcCCCCcccccCC-CeeEEeeecc
Confidence 35566678899999999 999999999999999999999999999999999999999999999999999 8999999999
Q ss_pred CCHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHhCCccccc
Q psy3338 99 ANEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKISQILLERFSDLQTN 150 (152)
Q Consensus 99 ~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~~~~~~ 150 (152)
|+.+++++|++.|++++.++..|+|+||.|.+.|+.+++++|+.+|+.+..+
T Consensus 161 Gh~~I~qyLle~gADvn~ks~kGNTALH~caEsG~vdivq~Ll~~ga~i~~d 212 (615)
T KOG0508|consen 161 GHVDIAQYLLEQGADVNAKSYKGNTALHDCAESGSVDIVQLLLKHGAKIDVD 212 (615)
T ss_pred CchHHHHHHHHhCCCcchhcccCchHHHhhhhcccHHHHHHHHhCCceeeec
Confidence 9999999999999999999999999999999999999999999999887644
No 5
>PHA02791 ankyrin-like protein; Provisional
Probab=99.93 E-value=8.3e-25 Score=146.60 Aligned_cols=128 Identities=18% Similarity=0.173 Sum_probs=110.9
Q ss_pred ccccCCCChhHHHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHH
Q psy3338 15 CKPILPEHIPLTIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLH 93 (152)
Q Consensus 15 ~~~~~~~~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~ 93 (152)
......|.||+ ++|+..|+.+ +++|++.|++++..+ |.||||+|+..|+.+++++|+..|++++..+..+ +||||
T Consensus 24 ~~~D~~G~TpL-h~Aa~~g~~eiv~~Ll~~ga~~n~~d--~~TpLh~Aa~~g~~eiV~lLL~~Gadvn~~d~~G-~TpLh 99 (284)
T PHA02791 24 FKADVHGHSAL-YYAIADNNVRLVCTLLNAGALKNLLE--NEFPLHQAATLEDTKIVKILLFSGMDDSQFDDKG-NTALY 99 (284)
T ss_pred CCCCCCCCcHH-HHHHHcCCHHHHHHHHHCcCCCcCCC--CCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCC-CCHHH
Confidence 34566788888 6688999999 999999999988765 6899999999999999999999999999998888 89999
Q ss_pred HHHHcCCHHHHHHHHhcCCCCCccCCCCC-cHHHHHHhcCcHHHHHHHHHhCCc
Q psy3338 94 RAASAANEEIVTLLLDNGADSTLKDSDGL-TALDRSRKESHEKISQILLERFSD 146 (152)
Q Consensus 94 ~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~-~~l~~a~~~~~~~i~~~L~~~~~~ 146 (152)
+|+..|+.+++++|++.|++++.++..|+ |||++|+..|+.+++++|++++++
T Consensus 100 ~Aa~~g~~eivk~Ll~~gadin~~~~~g~~TpL~~Aa~~g~~eivk~LL~~~~~ 153 (284)
T PHA02791 100 YAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPS 153 (284)
T ss_pred HHHHcCCHHHHHHHHHCCCCcCccCCCCCcHHHHHHHHcCCHHHHHHHHhcCCc
Confidence 99999999999999999999887776664 777877777777777777777654
No 6
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.93 E-value=8.6e-25 Score=154.57 Aligned_cols=127 Identities=24% Similarity=0.323 Sum_probs=102.0
Q ss_pred CCChhHHHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHHHc
Q psy3338 20 PEHIPLTIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAASA 98 (152)
Q Consensus 20 ~~~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~~ 98 (152)
.|.||+ ++|+..|+.+ +++|++.|++++.++..|.||||+|+..|+.+++++|+++|++++..+..| +||||+|+..
T Consensus 101 ~g~tpL-~~A~~~~~~~iv~~Ll~~gad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~~~~d~~g-~TpL~~A~~~ 178 (413)
T PHA02875 101 DGMTPL-HLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDIEDCCG-CTPLIIAMAK 178 (413)
T ss_pred CCCCHH-HHHHHhCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCC-CCHHHHHHHc
Confidence 456666 5577788888 888888888888888888888888888888888888888888888777777 7888888888
Q ss_pred CCHHHHHHHHhcCCCCCccCCCC-CcHHHHHHhcCcHHHHHHHHHhCCccc
Q psy3338 99 ANEEIVTLLLDNGADSTLKDSDG-LTALDRSRKESHEKISQILLERFSDLQ 148 (152)
Q Consensus 99 ~~~~~~~~Ll~~g~~~~~~~~~~-~~~l~~a~~~~~~~i~~~L~~~~~~~~ 148 (152)
|+.+++++|++.|++++..+..| .+|+++|+..++.+++++|+++|++++
T Consensus 179 g~~eiv~~Ll~~ga~~n~~~~~~~~t~l~~A~~~~~~~iv~~Ll~~gad~n 229 (413)
T PHA02875 179 GDIAICKMLLDSGANIDYFGKNGCVAALCYAIENNKIDIVRLFIKRGADCN 229 (413)
T ss_pred CCHHHHHHHHhCCCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHHCCcCcc
Confidence 88888888888888887777665 477777888888888888888888775
No 7
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.92 E-value=9e-25 Score=154.48 Aligned_cols=120 Identities=24% Similarity=0.250 Sum_probs=92.6
Q ss_pred HHHHcCCCC-CCCcCCCCCCCC-CCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHHHcCCHHHHH
Q psy3338 28 ILLTTGRYP-PGHLPICSVDPN-IPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAASAANEEIVT 105 (152)
Q Consensus 28 ~a~~~g~~~-v~~Ll~~~~~~~-~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~ 105 (152)
.|+..|+.+ +++|++.|.+.+ ..+..|.||||+|+..|+.+++++|+++|++++..+..+ .||||+|+..|+.++++
T Consensus 74 ~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~gad~~~~~~~g-~tpLh~A~~~~~~~~v~ 152 (413)
T PHA02875 74 DAVEEGDVKAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGADPDIPNTDK-FSPLHLAVMMGDIKGIE 152 (413)
T ss_pred HHHHCCCHHHHHHHHHcCCcccccccCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCC-CCHHHHHHHcCCHHHHH
Confidence 344444444 444444443322 234467888888888888888888888888888777777 78888888888888888
Q ss_pred HHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHhCCccc
Q psy3338 106 LLLDNGADSTLKDSDGLTALDRSRKESHEKISQILLERFSDLQ 148 (152)
Q Consensus 106 ~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~~~~ 148 (152)
+|++.|++++.++..|.||||+|+..|+.+++++|+++|++++
T Consensus 153 ~Ll~~g~~~~~~d~~g~TpL~~A~~~g~~eiv~~Ll~~ga~~n 195 (413)
T PHA02875 153 LLIDHKACLDIEDCCGCTPLIIAMAKGDIAICKMLLDSGANID 195 (413)
T ss_pred HHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCC
Confidence 8888888888888888888888888888888888888888876
No 8
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.92 E-value=1.2e-24 Score=136.17 Aligned_cols=127 Identities=23% Similarity=0.173 Sum_probs=112.4
Q ss_pred CChhHHHHHHHcCCCC-----CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHH---HHHHHhcCCCCCcccc-CCCcCH
Q psy3338 21 EHIPLTIILLTTGRYP-----PGHLPICSVDPNIPDNAGYTALHYAARSNNKPI---CLLLISRGANVNAVTR-AGQATP 91 (152)
Q Consensus 21 ~~~~~~~~a~~~g~~~-----v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~---~~~L~~~~~~~~~~~~-~~~~~~ 91 (152)
+.+++ +.|++.|+.+ +++|.+.|.+++.+|..|.||||+|+..|..+. +++|+..|++++.++. .+ +||
T Consensus 20 ~~~~l-~~a~~~g~~~~l~~~~~~l~~~g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~~d~~~g-~Tp 97 (166)
T PHA02743 20 EQNTF-LRICRTGNIYELMEVAPFISGDGHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADINARELGTG-NTL 97 (166)
T ss_pred CCcHH-HHHHHcCCHHHHHHHHHHHhhcchhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCCCCCCCCC-CcH
Confidence 44554 6688888874 456778899999999999999999999988654 7999999999998874 56 899
Q ss_pred HHHHHHcCCHHHHHHHHh-cCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHhCCcccc
Q psy3338 92 LHRAASAANEEIVTLLLD-NGADSTLKDSDGLTALDRSRKESHEKISQILLERFSDLQT 149 (152)
Q Consensus 92 l~~a~~~~~~~~~~~Ll~-~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~~~~~ 149 (152)
||+|+..++.+++++|+. .|++++.++..|.|||++|+..++.+++++|+++|+++++
T Consensus 98 Lh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~ 156 (166)
T PHA02743 98 LHIAASTKNYELAEWLCRQLGVNLGAINYQHETAYHIAYKMRDRRMMEILRANGAVCDD 156 (166)
T ss_pred HHHHHHhCCHHHHHHHHhccCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 999999999999999995 7999999999999999999999999999999999999875
No 9
>KOG0509|consensus
Probab=99.92 E-value=4.7e-25 Score=155.59 Aligned_cols=127 Identities=30% Similarity=0.349 Sum_probs=100.2
Q ss_pred CChhHHHHHHHcCCCC-CCCcCCCCCCCCCCC-CCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHHHc
Q psy3338 21 EHIPLTIILLTTGRYP-PGHLPICSVDPNIPD-NAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAASA 98 (152)
Q Consensus 21 ~~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~-~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~~ 98 (152)
++..++|+|+-+++++ +++|+++|+|+|..+ ..+.||||+|+++|+..++..|+++|+++..+|..| .+|+|.|+++
T Consensus 77 ~g~tlLHWAAiNNrl~v~r~li~~gadvn~~gG~l~stPLHWAar~G~~~vv~lLlqhGAdpt~~D~~G-~~~lHla~~~ 155 (600)
T KOG0509|consen 77 EGVTLLHWAAINNRLDVARYLISHGADVNAIGGVLGSTPLHWAARNGHISVVDLLLQHGADPTLKDKQG-LTPLHLAAQF 155 (600)
T ss_pred CCccceeHHHHcCcHHHHHHHHHcCCCccccCCCCCCCcchHHHHcCcHHHHHHHHHcCCCCceecCCC-CcHHHHHHHh
Confidence 5555567788888888 888888888888777 467788888888888888888888888888888777 7888888888
Q ss_pred CCHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHhCCccc
Q psy3338 99 ANEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKISQILLERFSDLQ 148 (152)
Q Consensus 99 ~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~~~~ 148 (152)
++.-++-+++.+|.+++.+|..|+|||++|+..|....+..|+..|+.+.
T Consensus 156 ~~~~~vayll~~~~d~d~~D~~grTpLmwAaykg~~~~v~~LL~f~a~~~ 205 (600)
T KOG0509|consen 156 GHTALVAYLLSKGADIDLRDNNGRTPLMWAAYKGFALFVRRLLKFGASLL 205 (600)
T ss_pred CchHHHHHHHHhcccCCCcCCCCCCHHHHHHHhcccHHHHHHHHhccccc
Confidence 88888888888888888888888888888888877766777777776654
No 10
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.91 E-value=6e-24 Score=152.66 Aligned_cols=128 Identities=31% Similarity=0.411 Sum_probs=116.2
Q ss_pred cCC-CChhHHHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHH
Q psy3338 18 ILP-EHIPLTIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRA 95 (152)
Q Consensus 18 ~~~-~~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a 95 (152)
... |.||+ |+|+..|+.+ +++|++.|++++.+|..|.||||+|+..|+.+++++|+++|++++.++..+ .||||+|
T Consensus 164 ~~~~g~tpL-h~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in~~d~~g-~TpLh~A 241 (477)
T PHA02878 164 DRHKGNTAL-HYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDARDKCG-NTPLHIS 241 (477)
T ss_pred CCCCCCCHH-HHHHhCCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCC-CCHHHHH
Confidence 344 77887 5688999999 999999999999999999999999999999999999999999999999888 8999999
Q ss_pred HHc-CCHHHHHHHHhcCCCCCccCC-CCCcHHHHHHhcCcHHHHHHHHHhCCcccc
Q psy3338 96 ASA-ANEEIVTLLLDNGADSTLKDS-DGLTALDRSRKESHEKISQILLERFSDLQT 149 (152)
Q Consensus 96 ~~~-~~~~~~~~Ll~~g~~~~~~~~-~~~~~l~~a~~~~~~~i~~~L~~~~~~~~~ 149 (152)
+.. ++.+++++|++.|++++.++. .|.||||+| .+..+++++|+++|++++.
T Consensus 242 ~~~~~~~~iv~~Ll~~gadvn~~~~~~g~TpLh~A--~~~~~~v~~Ll~~gadin~ 295 (477)
T PHA02878 242 VGYCKDYDILKLLLEHGVDVNAKSYILGLTALHSS--IKSERKLKLLLEYGADINS 295 (477)
T ss_pred HHhcCCHHHHHHHHHcCCCCCccCCCCCCCHHHHH--ccCHHHHHHHHHCCCCCCC
Confidence 976 689999999999999998875 799999999 5678999999999999874
No 11
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.91 E-value=6.3e-24 Score=142.59 Aligned_cols=119 Identities=22% Similarity=0.199 Sum_probs=107.5
Q ss_pred ccCCCChhHHHHHHHcCCCC-CCCcCCCCCCCCCCC----CCCccHHHHHHHcCCHHHHHHHHhcCCCCCcccc-CCCcC
Q psy3338 17 PILPEHIPLTIILLTTGRYP-PGHLPICSVDPNIPD----NAGYTALHYAARSNNKPICLLLISRGANVNAVTR-AGQAT 90 (152)
Q Consensus 17 ~~~~~~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~----~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~-~~~~~ 90 (152)
....+.+++++.|+..|+.+ +++|+++|+|++.++ ..|.||||+|+..++.+++++|+++|++++..+. .+ .|
T Consensus 28 ~d~~~~~~lL~~A~~~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g-~T 106 (300)
T PHA02884 28 KNKICIANILYSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAK-IT 106 (300)
T ss_pred cCcCCCCHHHHHHHHcCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCC-CC
Confidence 34568899999999999999 999999999999874 5899999999999999999999999999997654 45 89
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHH
Q psy3338 91 PLHRAASAANEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKI 136 (152)
Q Consensus 91 ~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i 136 (152)
|||.|+..++.+++++|++.|++++.++..|.||+++|+..++.++
T Consensus 107 pLh~Aa~~~~~eivklLL~~GAdin~kd~~G~TpL~~A~~~~~~~~ 152 (300)
T PHA02884 107 PLYISVLHGCLKCLEILLSYGADINIQTNDMVTPIELALMICNNFL 152 (300)
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCChhH
Confidence 9999999999999999999999999999999999999988654433
No 12
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.91 E-value=6.9e-24 Score=152.36 Aligned_cols=106 Identities=38% Similarity=0.511 Sum_probs=53.5
Q ss_pred CCCCCCCCCCCC-CccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHHHcCCHHHHHHHHhcCCCCCccCCC
Q psy3338 42 ICSVDPNIPDNA-GYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAASAANEEIVTLLLDNGADSTLKDSD 120 (152)
Q Consensus 42 ~~~~~~~~~~~~-g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~ 120 (152)
++|++++..+.. |.||||+|+..|+.+++++|+++|++++..+..+ +||||.|+..++.+++++|++.|++++.++..
T Consensus 155 ~~gadin~~~~~~g~tpLh~A~~~~~~~iv~~Ll~~gad~n~~d~~g-~tpLh~A~~~~~~~iv~~Ll~~ga~in~~d~~ 233 (477)
T PHA02878 155 SYGADINMKDRHKGNTALHYATENKDQRLTELLLSYGANVNIPDKTN-NSPLHHAVKHYNKPIVHILLENGASTDARDKC 233 (477)
T ss_pred HcCCCCCccCCCCCCCHHHHHHhCCCHHHHHHHHHCCCCCCCcCCCC-CCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCC
Confidence 344444444444 5555555555555555555555555554444444 45555555555555555555555555555555
Q ss_pred CCcHHHHHHhc-CcHHHHHHHHHhCCccc
Q psy3338 121 GLTALDRSRKE-SHEKISQILLERFSDLQ 148 (152)
Q Consensus 121 ~~~~l~~a~~~-~~~~i~~~L~~~~~~~~ 148 (152)
|.||||+|+.. ++.+++++|+++|++++
T Consensus 234 g~TpLh~A~~~~~~~~iv~~Ll~~gadvn 262 (477)
T PHA02878 234 GNTPLHISVGYCKDYDILKLLLEHGVDVN 262 (477)
T ss_pred CCCHHHHHHHhcCCHHHHHHHHHcCCCCC
Confidence 55555555543 34555555555555443
No 13
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.91 E-value=1.2e-23 Score=136.11 Aligned_cols=131 Identities=21% Similarity=0.158 Sum_probs=111.4
Q ss_pred ccCCCChhHHHHHHHc--CCCC-CCCcCCCCCCCCCCC-CCCccHHHHHHHc---CCHHHHHHHHhcCCCCCccccCCCc
Q psy3338 17 PILPEHIPLTIILLTT--GRYP-PGHLPICSVDPNIPD-NAGYTALHYAARS---NNKPICLLLISRGANVNAVTRAGQA 89 (152)
Q Consensus 17 ~~~~~~~~~~~~a~~~--g~~~-v~~Ll~~~~~~~~~~-~~g~~~L~~a~~~---g~~~~~~~L~~~~~~~~~~~~~~~~ 89 (152)
....+.||++. |+.+ ++.+ +++|+++|++++.++ ..|.||||+|+.. ++.+++++|+++|++++.++..+ .
T Consensus 47 ~~~~g~TpLh~-a~~~~~~~~eiv~~Ll~~gadvn~~~~~~g~TpLh~a~~~~~~~~~eiv~~Ll~~gadin~~d~~G-~ 124 (209)
T PHA02859 47 CNDLYETPIFS-CLEKDKVNVEILKFLIENGADVNFKTRDNNLSALHHYLSFNKNVEPEILKILIDSGSSITEEDEDG-K 124 (209)
T ss_pred cCccCCCHHHH-HHHcCCCCHHHHHHHHHCCCCCCccCCCCCCCHHHHHHHhCccccHHHHHHHHHCCCCCCCcCCCC-C
Confidence 34557888865 5554 4778 999999999999987 4899999998754 47899999999999999999888 8
Q ss_pred CHHHHHHH--cCCHHHHHHHHhcCCCCCccCCCCCcHHHH-HHhcCcHHHHHHHHHhCCcccc
Q psy3338 90 TPLHRAAS--AANEEIVTLLLDNGADSTLKDSDGLTALDR-SRKESHEKISQILLERFSDLQT 149 (152)
Q Consensus 90 ~~l~~a~~--~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~-a~~~~~~~i~~~L~~~~~~~~~ 149 (152)
||+|+|+. .++.+++++|++.|++++.++..|.||+|. +...++.+++++|+++|++++.
T Consensus 125 TpLh~a~~~~~~~~~iv~~Li~~gadin~~d~~g~t~Lh~~a~~~~~~~iv~~Ll~~Gadi~~ 187 (209)
T PHA02859 125 NLLHMYMCNFNVRINVIKLLIDSGVSFLNKDFDNNNILYSYILFHSDKKIFDFLTSLGIDINE 187 (209)
T ss_pred CHHHHHHHhccCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHhcCCHHHHHHHHHcCCCCCC
Confidence 99999876 467899999999999999999999999995 5667889999999999998874
No 14
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.91 E-value=1.3e-23 Score=151.01 Aligned_cols=127 Identities=31% Similarity=0.309 Sum_probs=77.2
Q ss_pred CCChhHHHHHHHcCCCC-CCCcCCCCCCCCCCCCCC------ccHHHHHHHcCC--HHHHHHHHhcCCCCCccccCCCcC
Q psy3338 20 PEHIPLTIILLTTGRYP-PGHLPICSVDPNIPDNAG------YTALHYAARSNN--KPICLLLISRGANVNAVTRAGQAT 90 (152)
Q Consensus 20 ~~~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g------~~~L~~a~~~g~--~~~~~~L~~~~~~~~~~~~~~~~~ 90 (152)
.|.||+ ++|+..|+.+ +++|+++|++++..+..| .||||.|+..|+ .+++++|+++|++++.++..+ .|
T Consensus 175 ~g~tpL-~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~g~din~~d~~g-~T 252 (480)
T PHA03100 175 YGYTPL-HIAVEKGNIDVIKFLLDNGADINAGDIETLLFTIFETPLHIAACYNEITLEVVNYLLSYGVPINIKDVYG-FT 252 (480)
T ss_pred CCCCHH-HHHHHhCCHHHHHHHHHcCCCccCCCCCCCcHHHHHhHHHHHHHhCcCcHHHHHHHHHcCCCCCCCCCCC-CC
Confidence 344444 3355555555 555555555555555555 555555555555 556666666666666555555 56
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHhCCccc
Q psy3338 91 PLHRAASAANEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKISQILLERFSDLQ 148 (152)
Q Consensus 91 ~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~~~~ 148 (152)
|||+|+..++.+++++|++.|++++.++..|.||+++|+..++.+++++|+++|++++
T Consensus 253 pL~~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpl~~A~~~~~~~iv~~Ll~~g~~i~ 310 (480)
T PHA03100 253 PLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIAILNNNKEIFKLLLNNGPSIK 310 (480)
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHhCCHHHHHHHHhcCCCHH
Confidence 6666666666666666666666666666666666666666666666666666666554
No 15
>PHA02741 hypothetical protein; Provisional
Probab=99.91 E-value=9.8e-24 Score=132.46 Aligned_cols=128 Identities=23% Similarity=0.240 Sum_probs=112.7
Q ss_pred cCCCChhHHHHHHHcCCCC-CCCcC------CCCCCCCCCCCCCccHHHHHHHcCC----HHHHHHHHhcCCCCCcccc-
Q psy3338 18 ILPEHIPLTIILLTTGRYP-PGHLP------ICSVDPNIPDNAGYTALHYAARSNN----KPICLLLISRGANVNAVTR- 85 (152)
Q Consensus 18 ~~~~~~~~~~~a~~~g~~~-v~~Ll------~~~~~~~~~~~~g~~~L~~a~~~g~----~~~~~~L~~~~~~~~~~~~- 85 (152)
...+.+|+ |+|++.|+.+ ++.|+ ..|++++.+|..|.||||+|+..|+ .+++++|+..|++++.++.
T Consensus 18 ~~~g~t~L-h~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~~~~~ 96 (169)
T PHA02741 18 NSEGENFF-HEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINAQEML 96 (169)
T ss_pred ccCCCCHH-HHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCCCCcC
Confidence 34567777 6688999999 88764 2368899999999999999999998 5889999999999998875
Q ss_pred CCCcCHHHHHHHcCCHHHHHHHHh-cCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHhCCcc
Q psy3338 86 AGQATPLHRAASAANEEIVTLLLD-NGADSTLKDSDGLTALDRSRKESHEKISQILLERFSDL 147 (152)
Q Consensus 86 ~~~~~~l~~a~~~~~~~~~~~Ll~-~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~~~ 147 (152)
.+ +||||+|+..++.+++++|+. .|++++..+..|.|||++|+..++.+++++|++.++..
T Consensus 97 ~g-~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~~g~tpL~~A~~~~~~~iv~~L~~~~~~~ 158 (169)
T PHA02741 97 EG-DTALHLAAHRRDHDLAEWLCCQPGIDLHFCNADNKSPFELAIDNEDVAMMQILREIVATS 158 (169)
T ss_pred CC-CCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHh
Confidence 56 899999999999999999997 59999999999999999999999999999999886543
No 16
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.91 E-value=2.6e-23 Score=147.84 Aligned_cols=128 Identities=24% Similarity=0.237 Sum_probs=79.8
Q ss_pred CCCChhHHHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCC------------------
Q psy3338 19 LPEHIPLTIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGAN------------------ 79 (152)
Q Consensus 19 ~~~~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~------------------ 79 (152)
..+.||+ +.|++.|+.+ +++|++.|++++..+..|.+|||+|+..|+.+++++|+++|++
T Consensus 33 ~~~~tpL-~~A~~~g~~~iv~~Ll~~Ga~~n~~~~~~~t~L~~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~i~~ll 111 (434)
T PHA02874 33 DETTTPL-IDAIRSGDAKIVELFIKHGADINHINTKIPHPLLTAIKIGAHDIIKLLIDNGVDTSILPIPCIEKDMIKTIL 111 (434)
T ss_pred CCCCCHH-HHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcchhccCCHHHHHHHH
Confidence 3455555 4566777777 7777777777766666666666666666666666666655432
Q ss_pred -----CCccccCCCcCHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHhCCccc
Q psy3338 80 -----VNAVTRAGQATPLHRAASAANEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKISQILLERFSDLQ 148 (152)
Q Consensus 80 -----~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~~~~ 148 (152)
++..+..+ .||||+|+..|+.+++++|++.|++++.++..|.||||+|+..++.+++++|+++|++++
T Consensus 112 ~~g~d~n~~~~~g-~T~Lh~A~~~~~~~~v~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n 184 (434)
T PHA02874 112 DCGIDVNIKDAEL-KTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYAN 184 (434)
T ss_pred HCcCCCCCCCCCC-ccHHHHHHHCCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCC
Confidence 23334444 566666666666666666666666666666666666666666666666666666665543
No 17
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.91 E-value=2.7e-23 Score=147.77 Aligned_cols=130 Identities=25% Similarity=0.318 Sum_probs=112.3
Q ss_pred cCCCChhHHHHHHHcCCCC-CCCcCCCC-----------------------CCCCCCCCCCccHHHHHHHcCCHHHHHHH
Q psy3338 18 ILPEHIPLTIILLTTGRYP-PGHLPICS-----------------------VDPNIPDNAGYTALHYAARSNNKPICLLL 73 (152)
Q Consensus 18 ~~~~~~~~~~~a~~~g~~~-v~~Ll~~~-----------------------~~~~~~~~~g~~~L~~a~~~g~~~~~~~L 73 (152)
...+.+|+ +.|+..|+.+ +++|+++| ++++.++..|.||||+|+..|+.+++++|
T Consensus 65 ~~~~~t~L-~~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~i~~ll~~g~d~n~~~~~g~T~Lh~A~~~~~~~~v~~L 143 (434)
T PHA02874 65 NTKIPHPL-LTAIKIGAHDIIKLLIDNGVDTSILPIPCIEKDMIKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKML 143 (434)
T ss_pred CCCCCCHH-HHHHHcCCHHHHHHHHHCCCCCCcchhccCCHHHHHHHHHCcCCCCCCCCCCccHHHHHHHCCCHHHHHHH
Confidence 34466776 5577888887 77776655 45677888899999999999999999999
Q ss_pred HhcCCCCCccccCCCcCHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHhCCcccc
Q psy3338 74 ISRGANVNAVTRAGQATPLHRAASAANEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKISQILLERFSDLQT 149 (152)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~~~~~ 149 (152)
+++|++++..+..+ .||||+|+..++.+++++|++.|++++..+..|.||||+|+..|+.+++++|+++|++++.
T Consensus 144 l~~gad~n~~d~~g-~tpLh~A~~~~~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~i~~ 218 (434)
T PHA02874 144 FEYGADVNIEDDNG-CYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGESPLHNAAEYGDYACIKLLIDHGNHIMN 218 (434)
T ss_pred HhCCCCCCCcCCCC-CCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCcC
Confidence 99999999888877 8999999999999999999999999999999999999999999999999999999988653
No 18
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.90 E-value=2e-23 Score=135.05 Aligned_cols=128 Identities=22% Similarity=0.230 Sum_probs=109.7
Q ss_pred cCCCChhHHHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcC--CHHHHHHHHhcCCCCCccccCCCcCHHHH
Q psy3338 18 ILPEHIPLTIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSN--NKPICLLLISRGANVNAVTRAGQATPLHR 94 (152)
Q Consensus 18 ~~~~~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g--~~~~~~~L~~~~~~~~~~~~~~~~~~l~~ 94 (152)
....++|+ +.|+..|+.+ ++.|++. ++..+..|.||||+|+..+ +.+++++|+++|++++.++...++||||+
T Consensus 18 ~~~~~~pL-~~A~~~~~~~~vk~Li~~---~n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~~~~g~TpLh~ 93 (209)
T PHA02859 18 FYRYCNPL-FYYVEKDDIEGVKKWIKF---VNDCNDLYETPIFSCLEKDKVNVEILKFLIENGADVNFKTRDNNLSALHH 93 (209)
T ss_pred hhccCcHH-HHHHHhCcHHHHHHHHHh---hhccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccCCCCCCCHHHH
Confidence 45567775 7799999999 9999865 4667889999999999865 89999999999999998875333899999
Q ss_pred HHHc---CCHHHHHHHHhcCCCCCccCCCCCcHHHHHHh--cCcHHHHHHHHHhCCcccc
Q psy3338 95 AASA---ANEEIVTLLLDNGADSTLKDSDGLTALDRSRK--ESHEKISQILLERFSDLQT 149 (152)
Q Consensus 95 a~~~---~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~--~~~~~i~~~L~~~~~~~~~ 149 (152)
|+.. +..+++++|++.|++++.++..|.||||+|+. .++.+++++|+++|++++.
T Consensus 94 a~~~~~~~~~eiv~~Ll~~gadin~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~ 153 (209)
T PHA02859 94 YLSFNKNVEPEILKILIDSGSSITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLN 153 (209)
T ss_pred HHHhCccccHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCccc
Confidence 8764 47899999999999999999999999999876 4679999999999999864
No 19
>KOG0509|consensus
Probab=99.90 E-value=3.2e-24 Score=151.45 Aligned_cols=129 Identities=29% Similarity=0.357 Sum_probs=118.2
Q ss_pred CCChhHHHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHHHc
Q psy3338 20 PEHIPLTIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAASA 98 (152)
Q Consensus 20 ~~~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~~ 98 (152)
-+.||+ |+|+++|++. +..|+++|+|++.+|.+|.+|+|.|+..|+...+-||+.++++++.+|..+ +|||++|+.+
T Consensus 111 l~stPL-HWAar~G~~~vv~lLlqhGAdpt~~D~~G~~~lHla~~~~~~~~vayll~~~~d~d~~D~~g-rTpLmwAayk 188 (600)
T KOG0509|consen 111 LGSTPL-HWAARNGHISVVDLLLQHGADPTLKDKQGLTPLHLAAQFGHTALVAYLLSKGADIDLRDNNG-RTPLMWAAYK 188 (600)
T ss_pred CCCCcc-hHHHHcCcHHHHHHHHHcCCCCceecCCCCcHHHHHHHhCchHHHHHHHHhcccCCCcCCCC-CCHHHHHHHh
Confidence 356776 7799999999 999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred CCHHHHHHHHhcCCCCCccC-CCCCcHHHHHHhcCcHHHHHHHHHhCCccccc
Q psy3338 99 ANEEIVTLLLDNGADSTLKD-SDGLTALDRSRKESHEKISQILLERFSDLQTN 150 (152)
Q Consensus 99 ~~~~~~~~Ll~~g~~~~~~~-~~~~~~l~~a~~~~~~~i~~~L~~~~~~~~~~ 150 (152)
|....+..|+..|+.+...| ..|.||||+|+..|+..++..|++-|++.+..
T Consensus 189 g~~~~v~~LL~f~a~~~~~d~~~g~TpLHwa~~~gN~~~v~Ll~~g~~~~d~~ 241 (600)
T KOG0509|consen 189 GFALFVRRLLKFGASLLLTDDNHGNTPLHWAVVGGNLTAVKLLLEGGADLDKT 241 (600)
T ss_pred cccHHHHHHHHhcccccccccccCCchHHHHHhcCCcceEehhhhcCCccccc
Confidence 99988899999999998887 79999999999999999999666666776643
No 20
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.90 E-value=3.4e-23 Score=156.61 Aligned_cols=126 Identities=28% Similarity=0.378 Sum_probs=102.0
Q ss_pred ChhHHHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHH------
Q psy3338 22 HIPLTIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHR------ 94 (152)
Q Consensus 22 ~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~------ 94 (152)
.+++ +.|+..|+.+ ++.|++.|+|++..|..|.||||+|+..|+.+++++|+++|++++.++..+ +||||.
T Consensus 526 ~~~L-~~Aa~~g~~~~l~~Ll~~G~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~~d~~G-~TpL~~A~~~g~ 603 (823)
T PLN03192 526 ASNL-LTVASTGNAALLEELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANG-NTALWNAISAKH 603 (823)
T ss_pred hhHH-HHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCCCCCcCCCC-CCHHHHHHHhCC
Confidence 3444 4466777777 888888888888888888888888888888888888888888887777666 677765
Q ss_pred -------------------------HHHcCCHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHhCCcccc
Q psy3338 95 -------------------------AASAANEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKISQILLERFSDLQT 149 (152)
Q Consensus 95 -------------------------a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~~~~~ 149 (152)
|+..|+.++++.|++.|++++.+|..|.||||+|+..|+.+++++|+++|++++.
T Consensus 604 ~~iv~~L~~~~~~~~~~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~GAdv~~ 683 (823)
T PLN03192 604 HKIFRILYHFASISDPHAAGDLLCTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQVAMAEDHVDMVRLLIMNGADVDK 683 (823)
T ss_pred HHHHHHHHhcCcccCcccCchHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCC
Confidence 4555566677778889999999999999999999999999999999999999874
No 21
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.90 E-value=4.7e-23 Score=148.22 Aligned_cols=129 Identities=29% Similarity=0.369 Sum_probs=107.7
Q ss_pred cCCCChhHHHH-----HHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHH--HcCCHHHHHHHHhcCCCCCccccCCCc
Q psy3338 18 ILPEHIPLTII-----LLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAA--RSNNKPICLLLISRGANVNAVTRAGQA 89 (152)
Q Consensus 18 ~~~~~~~~~~~-----a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~--~~g~~~~~~~L~~~~~~~~~~~~~~~~ 89 (152)
...+.+|+ +. |+..|+.+ ++.|++.|++++..|..|.||||+|+ ..|+.+++++|+++|++++..+..+ .
T Consensus 65 ~~~~~t~L-~~~~~~~a~~~~~~~iv~~Ll~~ga~i~~~d~~g~tpL~~A~~~~~~~~~iv~~Ll~~g~~~~~~~~~g-~ 142 (480)
T PHA03100 65 TKNNSTPL-HYLSNIKYNLTDVKEIVKLLLEYGANVNAPDNNGITPLLYAISKKSNSYSIVEYLLDNGANVNIKNSDG-E 142 (480)
T ss_pred cccCcCHH-HHHHHHHHHhhchHHHHHHHHHCCCCCCCCCCCCCchhhHHHhcccChHHHHHHHHHcCCCCCccCCCC-C
Confidence 34455665 66 77888888 88888888888888888888888888 8888888888888888888777777 7
Q ss_pred CHHHHHHHcC--CHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHhCCccc
Q psy3338 90 TPLHRAASAA--NEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKISQILLERFSDLQ 148 (152)
Q Consensus 90 ~~l~~a~~~~--~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~~~~ 148 (152)
||+|+|+..+ +.+++++|++.|++++.++..|.||||+|+..|+.+++++|+++|++++
T Consensus 143 t~L~~A~~~~~~~~~iv~~Ll~~g~din~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~ 203 (480)
T PHA03100 143 NLLHLYLESNKIDLKILKLLIDKGVDINAKNRYGYTPLHIAVEKGNIDVIKFLLDNGADIN 203 (480)
T ss_pred cHHHHHHHcCCChHHHHHHHHHCCCCcccccCCCCCHHHHHHHhCCHHHHHHHHHcCCCcc
Confidence 8888888888 8888888888888888888888888888888888888888888888776
No 22
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.89 E-value=1e-22 Score=150.28 Aligned_cols=129 Identities=21% Similarity=0.207 Sum_probs=74.0
Q ss_pred cCCCChhHHHHHHHcCCC--C-CCCcCCCCCCCCCCCCCCccHHHHH---------------------------------
Q psy3338 18 ILPEHIPLTIILLTTGRY--P-PGHLPICSVDPNIPDNAGYTALHYA--------------------------------- 61 (152)
Q Consensus 18 ~~~~~~~~~~~a~~~g~~--~-v~~Ll~~~~~~~~~~~~g~~~L~~a--------------------------------- 61 (152)
...|.||++ +|+..|+. + +++|+++|+|++.+|..|.||||+|
T Consensus 209 D~~G~TPLH-~Aa~~g~~~~eIVklLLe~GADVN~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~ 287 (764)
T PHA02716 209 NNHLITPLH-TYLITGNVCASVIKKIIELGGDMDMKCVNGMSPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMILHS 287 (764)
T ss_pred CCCCCCHHH-HHHHcCCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhhhccCHHHHHHHHHhccccccccchhhhHH
Confidence 344555553 34455543 4 6666666666666666666666543
Q ss_pred ----HHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHHH--cCCHHHHHHHHhcCCCCCccCCCCCcHHHHHHh-----
Q psy3338 62 ----ARSNNKPICLLLISRGANVNAVTRAGQATPLHRAAS--AANEEIVTLLLDNGADSTLKDSDGLTALDRSRK----- 130 (152)
Q Consensus 62 ----~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~--~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~----- 130 (152)
+..|+.+++++|+++|++++.++..| +||||+|+. .++.+++++|++.|++++.++..|+||||+|+.
T Consensus 288 ~i~AA~~g~leiVklLLe~GAdIN~kD~~G-~TPLH~Aaa~~~~~~eIVklLLe~GADIN~kD~~G~TPLH~A~~~lav~ 366 (764)
T PHA02716 288 YITLARNIDISVVYSFLQPGVKLHYKDSAG-RTCLHQYILRHNISTDIIKLLHEYGNDLNEPDNIGNTVLHTYLSMLSVV 366 (764)
T ss_pred HHHHHHcCCHHHHHHHHhCCCceeccCCCC-CCHHHHHHHHhCCCchHHHHHHHcCCCCccCCCCCCCHHHHHHHhhhhh
Confidence 23345556666666666666555555 566665543 345566666666666666666666666665543
Q ss_pred ---------cCcHHHHHHHHHhCCccc
Q psy3338 131 ---------ESHEKISQILLERFSDLQ 148 (152)
Q Consensus 131 ---------~~~~~i~~~L~~~~~~~~ 148 (152)
.++.+++++|+++|++++
T Consensus 367 ~~ld~~~~~~~~~eVVklLL~~GADIn 393 (764)
T PHA02716 367 NILDPETDNDIRLDVIQCLISLGADIT 393 (764)
T ss_pred ccccccccccChHHHHHHHHHCCCCCC
Confidence 245566666666666654
No 23
>PHA03095 ankyrin-like protein; Provisional
Probab=99.89 E-value=1.4e-22 Score=145.49 Aligned_cols=133 Identities=29% Similarity=0.341 Sum_probs=114.7
Q ss_pred ccccCCCChhHHHHHHHcC---CCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcC-CHHHHHHHHhcCCCCCccccCCCc
Q psy3338 15 CKPILPEHIPLTIILLTTG---RYP-PGHLPICSVDPNIPDNAGYTALHYAARSN-NKPICLLLISRGANVNAVTRAGQA 89 (152)
Q Consensus 15 ~~~~~~~~~~~~~~a~~~g---~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g-~~~~~~~L~~~~~~~~~~~~~~~~ 89 (152)
......|.||++. |+..+ +.+ ++.|++.|+|++.++..|.||||+|+..| ..+++++|+++|++++..+..+ +
T Consensus 41 n~~~~~g~t~Lh~-a~~~~~~~~~~iv~~Ll~~Gadin~~~~~g~TpLh~A~~~~~~~~iv~lLl~~ga~in~~~~~g-~ 118 (471)
T PHA03095 41 NFRGEYGKTPLHL-YLHYSSEKVKDIVRLLLEAGADVNAPERCGFTPLHLYLYNATTLDVIKLLIKAGADVNAKDKVG-R 118 (471)
T ss_pred ccCCCCCCCHHHH-HHHhcCCChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCcHHHHHHHHHcCCCCCCCCCCC-C
Confidence 3344557788855 56666 667 99999999999999999999999999999 5999999999999999988888 8
Q ss_pred CHHHHHH--HcCCHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcC--cHHHHHHHHHhCCcccc
Q psy3338 90 TPLHRAA--SAANEEIVTLLLDNGADSTLKDSDGLTALDRSRKES--HEKISQILLERFSDLQT 149 (152)
Q Consensus 90 ~~l~~a~--~~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~--~~~i~~~L~~~~~~~~~ 149 (152)
||||+|+ ..++.+++++|++.|++++..+..|.|||++++..+ ..+++++|+++|+++..
T Consensus 119 tpLh~a~~~~~~~~~iv~~Ll~~gad~~~~d~~g~tpL~~a~~~~~~~~~iv~~Ll~~g~~~~~ 182 (471)
T PHA03095 119 TPLHVYLSGFNINPKVIRLLLRKGADVNALDLYGMTPLAVLLKSRNANVELLRLLIDAGADVYA 182 (471)
T ss_pred CHHHHHhhCCcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCcc
Confidence 9999999 556789999999999999999999999999988766 57899999999988764
No 24
>PHA02946 ankyin-like protein; Provisional
Probab=99.89 E-value=1.8e-22 Score=143.46 Aligned_cols=132 Identities=20% Similarity=0.228 Sum_probs=80.1
Q ss_pred CccccCCCChhHHHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCC--HHHHHHHHhcCCCCCc-cccCCCc
Q psy3338 14 TCKPILPEHIPLTIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNN--KPICLLLISRGANVNA-VTRAGQA 89 (152)
Q Consensus 14 ~~~~~~~~~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~--~~~~~~L~~~~~~~~~-~~~~~~~ 89 (152)
.......|.||+ |+|+..|+.+ +++|+++|++++.+|..|.||||+|+..+. .+++++|+++|++++. .+..+ .
T Consensus 65 vn~~d~~G~TpL-h~Aa~~g~~eiv~lLL~~GAdin~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~Gadin~~~d~~g-~ 142 (446)
T PHA02946 65 PNETDDDGNYPL-HIASKINNNRIVAMLLTHGADPNACDKQHKTPLYYLSGTDDEVIERINLLVQYGAKINNSVDEEG-C 142 (446)
T ss_pred CCccCCCCCCHH-HHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCcccccCCCC-C
Confidence 334455677777 4567777777 888888888888888888888887776553 5677777777777664 23333 5
Q ss_pred CHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCc--HHHHHHHHHhCCccc
Q psy3338 90 TPLHRAASAANEEIVTLLLDNGADSTLKDSDGLTALDRSRKESH--EKISQILLERFSDLQ 148 (152)
Q Consensus 90 ~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~--~~i~~~L~~~~~~~~ 148 (152)
||++ |+..+..+++++|++.|++++..+..|+||||+|+..++ .+++++|+++|++++
T Consensus 143 tpL~-aa~~~~~~vv~~Ll~~gad~~~~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~Gadin 202 (446)
T PHA02946 143 GPLL-ACTDPSERVFKKIMSIGFEARIVDKFGKNHIHRHLMSDNPKASTISWMMKLGISPS 202 (446)
T ss_pred cHHH-HHHCCChHHHHHHHhccccccccCCCCCCHHHHHHHhcCCCHHHHHHHHHcCCCCc
Confidence 5554 344455555555555555555555555555555444322 345555555555544
No 25
>PHA03095 ankyrin-like protein; Provisional
Probab=99.89 E-value=3.5e-22 Score=143.38 Aligned_cols=130 Identities=28% Similarity=0.266 Sum_probs=112.6
Q ss_pred cCCCChhHHHHHHH-cCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCH--HHHHHHHhcCCCCCccccCCCcCHHH
Q psy3338 18 ILPEHIPLTIILLT-TGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNK--PICLLLISRGANVNAVTRAGQATPLH 93 (152)
Q Consensus 18 ~~~~~~~~~~~a~~-~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~--~~~~~L~~~~~~~~~~~~~~~~~~l~ 93 (152)
...+.+|++.++.. .++.+ ++.|++.|++++.+|..|.||||+|+..|+. .+++.|+..|++++..+..| +||||
T Consensus 184 d~~g~t~Lh~~~~~~~~~~~i~~~Ll~~g~~~~~~d~~g~tpLh~Aa~~~~~~~~~v~~ll~~g~din~~d~~g-~TpLh 262 (471)
T PHA03095 184 DDRFRSLLHHHLQSFKPRARIVRELIRAGCDPAATDMLGNTPLHSMATGSSCKRSLVLPLLIAGISINARNRYG-QTPLH 262 (471)
T ss_pred CCCCCCHHHHHHHHCCCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCchHHHHHHHHHcCCCCCCcCCCC-CCHHH
Confidence 45577787665443 34445 8889999999999999999999999998874 57888899999999998777 89999
Q ss_pred HHHHcCCHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHhCCccc
Q psy3338 94 RAASAANEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKISQILLERFSDLQ 148 (152)
Q Consensus 94 ~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~~~~ 148 (152)
+|+..|+.+++++|++.|++++..+..|.||+++|+..++.++++.|++++++++
T Consensus 263 ~A~~~~~~~~v~~LL~~gad~n~~~~~g~tpl~~A~~~~~~~~v~~LL~~~~~~~ 317 (471)
T PHA03095 263 YAAVFNNPRACRRLIALGADINAVSSDGNTPLSLMVRNNNGRAVRAALAKNPSAE 317 (471)
T ss_pred HHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCCHHHHHHHHHhCCCHH
Confidence 9999999999999999999999999999999999999999999999999988874
No 26
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.89 E-value=2.3e-22 Score=148.51 Aligned_cols=130 Identities=22% Similarity=0.178 Sum_probs=112.6
Q ss_pred cCCCChhHHHHHHH--cCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCC--HHHHHHHHhcCCCCCccccCCCcCHH
Q psy3338 18 ILPEHIPLTIILLT--TGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNN--KPICLLLISRGANVNAVTRAGQATPL 92 (152)
Q Consensus 18 ~~~~~~~~~~~a~~--~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~--~~~~~~L~~~~~~~~~~~~~~~~~~l 92 (152)
...|.+|++. |+. .++.+ +++|+++|++++.+|..|.||||+|+..|+ .+++++|+++|++++.++..+ +|||
T Consensus 174 d~~G~TpLH~-A~~n~~~~~eIVklLLe~GADVN~kD~~G~TPLH~Aa~~g~~~~eIVklLLe~GADVN~kD~~G-~TPL 251 (764)
T PHA02716 174 KKTGYGILHA-YLGNMYVDIDILEWLCNNGVNVNLQNNHLITPLHTYLITGNVCASVIKKIIELGGDMDMKCVNG-MSPI 251 (764)
T ss_pred CCCCCcHHHH-HHHhccCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCCCCCCCC-CCHH
Confidence 4568888865 443 35667 999999999999999999999999999995 489999999999999999888 8999
Q ss_pred HHH-------------------------------------HHcCCHHHHHHHHhcCCCCCccCCCCCcHHHHHHh--cCc
Q psy3338 93 HRA-------------------------------------ASAANEEIVTLLLDNGADSTLKDSDGLTALDRSRK--ESH 133 (152)
Q Consensus 93 ~~a-------------------------------------~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~--~~~ 133 (152)
|.| +..|+.+++++|++.|++++.++..|+||||+|+. .++
T Consensus 252 h~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i~AA~~g~leiVklLLe~GAdIN~kD~~G~TPLH~Aaa~~~~~ 331 (764)
T PHA02716 252 MTYIINIDNINPEITNIYIESLDGNKVKNIPMILHSYITLARNIDISVVYSFLQPGVKLHYKDSAGRTCLHQYILRHNIS 331 (764)
T ss_pred HHHHHhhhccCHHHHHHHHHhccccccccchhhhHHHHHHHHcCCHHHHHHHHhCCCceeccCCCCCCHHHHHHHHhCCC
Confidence 965 34577889999999999999999999999998764 457
Q ss_pred HHHHHHHHHhCCcccc
Q psy3338 134 EKISQILLERFSDLQT 149 (152)
Q Consensus 134 ~~i~~~L~~~~~~~~~ 149 (152)
.+++++|+++|++++.
T Consensus 332 ~eIVklLLe~GADIN~ 347 (764)
T PHA02716 332 TDIIKLLHEYGNDLNE 347 (764)
T ss_pred chHHHHHHHcCCCCcc
Confidence 8999999999999864
No 27
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.88 E-value=5.1e-22 Score=148.03 Aligned_cols=131 Identities=27% Similarity=0.241 Sum_probs=110.2
Q ss_pred cCCCChhHHHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHH
Q psy3338 18 ILPEHIPLTIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAA 96 (152)
Q Consensus 18 ~~~~~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~ 96 (152)
...+.||+++++...++.+ ++.|++.|++++.+|..|.||||+|+..|+.+++++|+++|++++..+..+ .||||+|+
T Consensus 338 d~~g~TpLh~A~~~~~~~~iv~lLl~~gadin~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~gad~~~~~~~g-~T~Lh~A~ 416 (682)
T PHA02876 338 DRLYITPLHQASTLDRNKDIVITLLELGANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGADIEALSQKI-GTALHFAL 416 (682)
T ss_pred ccCCCcHHHHHHHhCCcHHHHHHHHHcCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCccccCCCC-CchHHHHH
Confidence 3456677765444455566 778888899999999999999999999999999999999999998888877 79999998
Q ss_pred HcCC-HHHHHHHHhcCCCCCccCCCCCcHHHHHHhcC-cHHHHHHHHHhCCcccc
Q psy3338 97 SAAN-EEIVTLLLDNGADSTLKDSDGLTALDRSRKES-HEKISQILLERFSDLQT 149 (152)
Q Consensus 97 ~~~~-~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~-~~~i~~~L~~~~~~~~~ 149 (152)
..+. ..++++|++.|++++.++..|+||||+|+..+ +.+++++|+++|++++.
T Consensus 417 ~~~~~~~~vk~Ll~~gadin~~d~~G~TpLh~Aa~~~~~~~iv~lLl~~Gad~n~ 471 (682)
T PHA02876 417 CGTNPYMSVKTLIDRGANVNSKNKDLSTPLHYACKKNCKLDVIEMLLDNGADVNA 471 (682)
T ss_pred HcCCHHHHHHHHHhCCCCCCcCCCCCChHHHHHHHhCCcHHHHHHHHHCCCCCCC
Confidence 7665 45688999999999999999999999999877 68999999999998874
No 28
>KOG0508|consensus
Probab=99.88 E-value=3.1e-23 Score=142.51 Aligned_cols=119 Identities=32% Similarity=0.407 Sum_probs=111.9
Q ss_pred ChhHHHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHHHcCC
Q psy3338 22 HIPLTIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAASAAN 100 (152)
Q Consensus 22 ~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~~~~ 100 (152)
.||+ ..|+.-|+++ +++|+++|+|+++.+..|.|+||+||..|+.+++++|++.|++++.++..| +|+||.+++.|+
T Consensus 118 StPL-raACfDG~leivKyLvE~gad~~IanrhGhTcLmIa~ykGh~~I~qyLle~gADvn~ks~kG-NTALH~caEsG~ 195 (615)
T KOG0508|consen 118 STPL-RAACFDGHLEIVKYLVEHGADPEIANRHGHTCLMIACYKGHVDIAQYLLEQGADVNAKSYKG-NTALHDCAESGS 195 (615)
T ss_pred CccH-HHHHhcchhHHHHHHHHcCCCCcccccCCCeeEEeeeccCchHHHHHHHHhCCCcchhcccC-chHHHhhhhccc
Confidence 3666 7799999999 999999999999999999999999999999999999999999999999988 999999999999
Q ss_pred HHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHh
Q psy3338 101 EEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKISQILLER 143 (152)
Q Consensus 101 ~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~ 143 (152)
.+++++|+..|+.+. .|.+|.|||..|...|+.+++++|++.
T Consensus 196 vdivq~Ll~~ga~i~-~d~~GmtPL~~Aa~tG~~~iVe~L~~~ 237 (615)
T KOG0508|consen 196 VDIVQLLLKHGAKID-VDGHGMTPLLLAAVTGHTDIVERLLQC 237 (615)
T ss_pred HHHHHHHHhCCceee-ecCCCCchHHHHhhhcchHHHHHHhcC
Confidence 999999999998875 466799999999999999999999964
No 29
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.88 E-value=1.2e-22 Score=125.74 Aligned_cols=129 Identities=20% Similarity=0.170 Sum_probs=105.2
Q ss_pred cCCCChhHHHHHHHcCCCC-CCCcCCC-----CCCCCCCCCCCccHHHHHHHcCCHH---HHHHHHhcCCCCCcccc-CC
Q psy3338 18 ILPEHIPLTIILLTTGRYP-PGHLPIC-----SVDPNIPDNAGYTALHYAARSNNKP---ICLLLISRGANVNAVTR-AG 87 (152)
Q Consensus 18 ~~~~~~~~~~~a~~~g~~~-v~~Ll~~-----~~~~~~~~~~g~~~L~~a~~~g~~~---~~~~L~~~~~~~~~~~~-~~ 87 (152)
...|.||+ |+|++.|+.. +..+... +..++.+|..|.||||+|+..|..+ ++++|++.|++++.++. .+
T Consensus 14 d~~g~tpL-h~A~~~g~~~~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~~~~~~g 92 (154)
T PHA02736 14 DIEGENIL-HYLCRNGGVTDLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADINGKERVFG 92 (154)
T ss_pred CCCCCCHH-HHHHHhCCHHHHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcCCCccccCCCCC
Confidence 34588887 5577888743 2211111 1123356788999999999999874 68899999999998875 56
Q ss_pred CcCHHHHHHHcCCHHHHHHHHh-cCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHhCCccc
Q psy3338 88 QATPLHRAASAANEEIVTLLLD-NGADSTLKDSDGLTALDRSRKESHEKISQILLERFSDLQ 148 (152)
Q Consensus 88 ~~~~l~~a~~~~~~~~~~~Ll~-~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~~~~ 148 (152)
+||||+|+..++.+++++|+. .|++++.++..|.|||++|+..++.+++++|+++|++.+
T Consensus 93 -~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tpL~~A~~~~~~~i~~~Ll~~ga~~~ 153 (154)
T PHA02736 93 -NTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPYYVACERHDAKMMNILRAKGAQCK 153 (154)
T ss_pred -CcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 899999999999999999997 589999999999999999999999999999999998764
No 30
>PHA02798 ankyrin-like protein; Provisional
Probab=99.88 E-value=4.4e-22 Score=143.45 Aligned_cols=130 Identities=30% Similarity=0.318 Sum_probs=107.6
Q ss_pred CCCChhHHHHHHHc-CCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHc-----CCHHHHHHHHhcCCCCCccccCCCcCH
Q psy3338 19 LPEHIPLTIILLTT-GRYP-PGHLPICSVDPNIPDNAGYTALHYAARS-----NNKPICLLLISRGANVNAVTRAGQATP 91 (152)
Q Consensus 19 ~~~~~~~~~~a~~~-g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~-----g~~~~~~~L~~~~~~~~~~~~~~~~~~ 91 (152)
..+.+++..+.... ++.+ +++|+++|+|++.+|..|.||||.++.. +..+++++|+++|++++..+..| +||
T Consensus 34 ~~~~~~~~~yl~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~GadiN~~d~~G-~Tp 112 (489)
T PHA02798 34 VNEYSIFQKYLQRDSPSTDIVKLFINLGANVNGLDNEYSTPLCTILSNIKDYKHMLDIVKILIENGADINKKNSDG-ETP 112 (489)
T ss_pred cccchHHHHHHhCCCCCHHHHHHHHHCCCCCCCCCCCCCChHHHHHHhHHhHHhHHHHHHHHHHCCCCCCCCCCCc-CcH
Confidence 44666555444333 3556 9999999999999999999999988754 56789999999999999888887 899
Q ss_pred HHHHHHcC---CHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCc---HHHHHHHHHhCCcccc
Q psy3338 92 LHRAASAA---NEEIVTLLLDNGADSTLKDSDGLTALDRSRKESH---EKISQILLERFSDLQT 149 (152)
Q Consensus 92 l~~a~~~~---~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~---~~i~~~L~~~~~~~~~ 149 (152)
||+|+..+ +.+++++|++.|++++.++..|.||||+|+..++ .+++++|+++|++++.
T Consensus 113 Lh~a~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gadin~ 176 (489)
T PHA02798 113 LYCLLSNGYINNLEILLFMIENGADTTLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEKGVDINT 176 (489)
T ss_pred HHHHHHcCCcChHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCcchHHHHHHHHHhCCCccc
Confidence 99998875 6789999999999999999999999999999887 8999999999988753
No 31
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.88 E-value=6.5e-22 Score=142.70 Aligned_cols=129 Identities=23% Similarity=0.215 Sum_probs=95.7
Q ss_pred CCCChhHHHHHHHcC-CCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcC------CHHHHHHHHhcCCCCCccccCCCcC
Q psy3338 19 LPEHIPLTIILLTTG-RYP-PGHLPICSVDPNIPDNAGYTALHYAARSN------NKPICLLLISRGANVNAVTRAGQAT 90 (152)
Q Consensus 19 ~~~~~~~~~~a~~~g-~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g------~~~~~~~L~~~~~~~~~~~~~~~~~ 90 (152)
..|.+|++++++..+ +.+ +++|+++|+|++.++ .+.||||.|+..+ ..+++++|+++|++++.++..| .|
T Consensus 33 ~~g~t~l~~~~~~~~~~~~iv~~Ll~~GAdvn~~~-~~~tpL~~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g-~t 110 (494)
T PHA02989 33 YRGNSILLLYLKRKDVKIKIVKLLIDNGADVNYKG-YIETPLCAVLRNREITSNKIKKIVKLLLKFGADINLKTFNG-VS 110 (494)
T ss_pred cCCCCHHHHHHhcCCCChHHHHHHHHcCCCccCCC-CCCCcHHHHHhccCcchhhHHHHHHHHHHCCCCCCCCCCCC-Cc
Confidence 557777766665554 567 888888888888765 4678888776654 3567888888888888777777 78
Q ss_pred HHHHHHHc---CCHHHHHHHHhcCCCC-CccCCCCCcHHHHHHhc--CcHHHHHHHHHhCCcccc
Q psy3338 91 PLHRAASA---ANEEIVTLLLDNGADS-TLKDSDGLTALDRSRKE--SHEKISQILLERFSDLQT 149 (152)
Q Consensus 91 ~l~~a~~~---~~~~~~~~Ll~~g~~~-~~~~~~~~~~l~~a~~~--~~~~i~~~L~~~~~~~~~ 149 (152)
|||.|+.. ++.+++++|++.|+++ +.++..|.||||+|+.. ++.+++++|+++|++++.
T Consensus 111 pL~~a~~~~~~~~~eiv~~Ll~~Gadin~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~~Gadi~~ 175 (494)
T PHA02989 111 PIVCFIYNSNINNCDMLRFLLSKGINVNDVKNSRGYNLLHMYLESFSVKKDVIKILLSFGVNLFE 175 (494)
T ss_pred HHHHHHHhcccCcHHHHHHHHHCCCCcccccCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCccc
Confidence 88876654 5678888888888888 67777888888877653 467888888888887654
No 32
>PHA02798 ankyrin-like protein; Provisional
Probab=99.88 E-value=8.9e-22 Score=141.85 Aligned_cols=78 Identities=24% Similarity=0.309 Sum_probs=43.2
Q ss_pred ccCCCChhHHHHHHHcC---CCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCC---HHHHHHHHhcCCCCCccccCCCc
Q psy3338 17 PILPEHIPLTIILLTTG---RYP-PGHLPICSVDPNIPDNAGYTALHYAARSNN---KPICLLLISRGANVNAVTRAGQA 89 (152)
Q Consensus 17 ~~~~~~~~~~~~a~~~g---~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~---~~~~~~L~~~~~~~~~~~~~~~~ 89 (152)
....|.||++. |+.++ +.+ +++|+++|+|++.+|..|.||||+|+..++ .+++++|+++|++++..+...+.
T Consensus 105 ~d~~G~TpLh~-a~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gadin~~~~~~~~ 183 (489)
T PHA02798 105 KNSDGETPLYC-LLSNGYINNLEILLFMIENGADTTLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEKGVDINTHNNKEKY 183 (489)
T ss_pred CCCCcCcHHHH-HHHcCCcChHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCcchHHHHHHHHHhCCCcccccCcCCC
Confidence 33456666643 44433 334 666666666666666666666666666665 66666666666655544322223
Q ss_pred CHHHHH
Q psy3338 90 TPLHRA 95 (152)
Q Consensus 90 ~~l~~a 95 (152)
||+|.+
T Consensus 184 t~Lh~~ 189 (489)
T PHA02798 184 DTLHCY 189 (489)
T ss_pred cHHHHH
Confidence 444443
No 33
>PHA02795 ankyrin-like protein; Provisional
Probab=99.88 E-value=8.2e-22 Score=137.50 Aligned_cols=126 Identities=24% Similarity=0.225 Sum_probs=97.5
Q ss_pred ChhHHHHHHHcCCCC-CCCcCCCCCCCCCCC------CCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHH
Q psy3338 22 HIPLTIILLTTGRYP-PGHLPICSVDPNIPD------NAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHR 94 (152)
Q Consensus 22 ~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~------~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~ 94 (152)
.+|+ +.|+..|+.+ +++|+.+|++..... ..+.+++|.|+..+..+++++|+++|++++.++..| .||||+
T Consensus 150 ~t~l-h~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~GADIN~kD~~G-~TpLh~ 227 (437)
T PHA02795 150 LNAY-FRGICKKESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYIEDINQLDAGG-RTLLYR 227 (437)
T ss_pred CCHH-HHHHHcCcHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhCcCCcCcCCCCC-CCHHHH
Confidence 4555 4566677777 777777776322111 235667777777777788888888888888888777 899999
Q ss_pred HHHcCCHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcC--------cHHHHHHHHHhCCcccc
Q psy3338 95 AASAANEEIVTLLLDNGADSTLKDSDGLTALDRSRKES--------HEKISQILLERFSDLQT 149 (152)
Q Consensus 95 a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~--------~~~i~~~L~~~~~~~~~ 149 (152)
|+..|+.+++++|++.|++++.++..|.||||+|+..| +.+++++|+++|++++.
T Consensus 228 Aa~~g~~eiVelLL~~GAdIN~~d~~G~TpLh~Aa~~g~~~~~~~~~~eIvelLL~~gadI~~ 290 (437)
T PHA02795 228 AIYAGYIDLVSWLLENGANVNAVMSNGYTCLDVAVDRGSVIARRETHLKILEILLREPLSIDC 290 (437)
T ss_pred HHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCcccccccHHHHHHHHHhCCCCCCc
Confidence 99999999999999999999999999999999998887 36899999998887763
No 34
>KOG0510|consensus
Probab=99.88 E-value=2.9e-22 Score=145.06 Aligned_cols=129 Identities=27% Similarity=0.250 Sum_probs=116.4
Q ss_pred cCCCChhHHHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHh-cCC-CCCccccCCCcCHHHH
Q psy3338 18 ILPEHIPLTIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLIS-RGA-NVNAVTRAGQATPLHR 94 (152)
Q Consensus 18 ~~~~~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~-~~~-~~~~~~~~~~~~~l~~ 94 (152)
...|.||+ |+|++.|..+ +..|+..|++++.++.++.||||.|+.+|++.+++.|++ .+. ..+..|..+ .||+|.
T Consensus 270 d~dg~tpL-H~a~r~G~~~svd~Ll~~Ga~I~~kn~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~g-~tpLHl 347 (929)
T KOG0510|consen 270 DNDGCTPL-HYAARQGGPESVDNLLGFGASINSKNKDEESPLHFAAIYGRINTVERLLQESDTRLLNESDLHG-MTPLHL 347 (929)
T ss_pred cccCCchH-HHHHHcCChhHHHHHHHcCCcccccCCCCCCchHHHHHcccHHHHHHHHhCcCccccccccccC-CCchhh
Confidence 45577887 7799999999 999999999999999999999999999999999999998 543 345566666 999999
Q ss_pred HHHcCCHHHHHHHHhcCCCCC---ccCCCCCcHHHHHHhcCcHHHHHHHHHhCCccc
Q psy3338 95 AASAANEEIVTLLLDNGADST---LKDSDGLTALDRSRKESHEKISQILLERFSDLQ 148 (152)
Q Consensus 95 a~~~~~~~~~~~Ll~~g~~~~---~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~~~~ 148 (152)
|++.|+..++++|++.|+... ..|.+|.||||.|+..|+..++++|+.+|+++.
T Consensus 348 aa~~gH~~v~qlLl~~GA~~~~~~e~D~dg~TaLH~Aa~~g~~~av~~Li~~Ga~I~ 404 (929)
T KOG0510|consen 348 AAKSGHDRVVQLLLNKGALFLNMSEADSDGNTALHLAAKYGNTSAVQKLISHGADIG 404 (929)
T ss_pred hhhcCHHHHHHHHHhcChhhhcccccccCCchhhhHHHHhccHHHHHHHHHcCCcee
Confidence 999999999999999998876 458899999999999999999999999999984
No 35
>KOG0502|consensus
Probab=99.87 E-value=1.3e-22 Score=127.35 Aligned_cols=130 Identities=28% Similarity=0.304 Sum_probs=116.6
Q ss_pred CCCCccccCCCChhHHHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCc
Q psy3338 11 DLPTCKPILPEHIPLTIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQA 89 (152)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~ 89 (152)
....+.....|.||+ .+|++.|++. |++|+..|+|++...+...++|..|++.|..++++.|+.++.++|..|..| -
T Consensus 150 ~n~VN~~De~GfTpL-iWAaa~G~i~vV~fLL~~GAdp~~lgk~resALsLAt~ggytdiV~lLL~r~vdVNvyDwNG-g 227 (296)
T KOG0502|consen 150 NNKVNACDEFGFTPL-IWAAAKGHIPVVQFLLNSGADPDALGKYRESALSLATRGGYTDIVELLLTREVDVNVYDWNG-G 227 (296)
T ss_pred hccccCccccCchHh-HHHHhcCchHHHHHHHHcCCChhhhhhhhhhhHhHHhcCChHHHHHHHHhcCCCcceeccCC-C
Confidence 334455667799999 4588999999 999999999999999999999999999999999999999999999999888 6
Q ss_pred CHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHh
Q psy3338 90 TPLHRAASAANEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKISQILLER 143 (152)
Q Consensus 90 ~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~ 143 (152)
|||.+|++.++.+|++.|++.|++++..+..|++++..|+..|+. ++++++++
T Consensus 228 TpLlyAvrgnhvkcve~Ll~sGAd~t~e~dsGy~~mdlAValGyr-~Vqqvie~ 280 (296)
T KOG0502|consen 228 TPLLYAVRGNHVKCVESLLNSGADVTQEDDSGYWIMDLAVALGYR-IVQQVIEK 280 (296)
T ss_pred ceeeeeecCChHHHHHHHHhcCCCcccccccCCcHHHHHHHhhhH-HHHHHHHH
Confidence 999999999999999999999999999999999999999999998 55555544
No 36
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.87 E-value=2e-21 Score=140.16 Aligned_cols=57 Identities=26% Similarity=0.224 Sum_probs=33.1
Q ss_pred cCHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHhCC
Q psy3338 89 ATPLHRAASAANEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKISQILLERFS 145 (152)
Q Consensus 89 ~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~ 145 (152)
+||||+|+..++.+++++|++.|++++.++..|.|||++|+..++.++++.|+++++
T Consensus 257 ~TpL~~Aa~~~~~~~v~~LL~~Gadin~~d~~G~TpL~~A~~~~~~~iv~~LL~~~p 313 (494)
T PHA02989 257 FNPLLISAKVDNYEAFNYLLKLGDDIYNVSKDGDTVLTYAIKHGNIDMLNRILQLKP 313 (494)
T ss_pred CCHHHHHHHhcCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCC
Confidence 555555555555555555555555555555555555555555555555555555544
No 37
>PHA02946 ankyin-like protein; Provisional
Probab=99.87 E-value=2.5e-21 Score=137.70 Aligned_cols=126 Identities=24% Similarity=0.274 Sum_probs=108.7
Q ss_pred ChhHHHHHHHcC-CCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHHHcC
Q psy3338 22 HIPLTIILLTTG-RYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAASAA 99 (152)
Q Consensus 22 ~~~~~~~a~~~g-~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~~~ 99 (152)
.++++.++...+ +.+ +++|++.|++++.+|..|.||||+|+..|+.+++++|+++|++++.++..+ +||||+|+..+
T Consensus 38 ~~~Lh~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~G~TpLh~Aa~~g~~eiv~lLL~~GAdin~~d~~g-~TpLh~A~~~~ 116 (446)
T PHA02946 38 YHILHAYCGIKGLDERFVEELLHRGYSPNETDDDGNYPLHIASKINNNRIVAMLLTHGADPNACDKQH-KTPLYYLSGTD 116 (446)
T ss_pred ChHHHHHHHhcCCCHHHHHHHHHCcCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCC-CCHHHHHHHcC
Confidence 355554443333 445 999999999999999999999999999999999999999999999999888 89999998765
Q ss_pred C--HHHHHHHHhcCCCCCc-cCCCCCcHHHHHHhcCcHHHHHHHHHhCCcccc
Q psy3338 100 N--EEIVTLLLDNGADSTL-KDSDGLTALDRSRKESHEKISQILLERFSDLQT 149 (152)
Q Consensus 100 ~--~~~~~~Ll~~g~~~~~-~~~~~~~~l~~a~~~~~~~i~~~L~~~~~~~~~ 149 (152)
. .+++++|+++|++++. .+..|.|||+ |+..+..+++++|+++|++++.
T Consensus 117 ~~~~e~v~lLl~~Gadin~~~d~~g~tpL~-aa~~~~~~vv~~Ll~~gad~~~ 168 (446)
T PHA02946 117 DEVIERINLLVQYGAKINNSVDEEGCGPLL-ACTDPSERVFKKIMSIGFEARI 168 (446)
T ss_pred CchHHHHHHHHHcCCCcccccCCCCCcHHH-HHHCCChHHHHHHHhccccccc
Confidence 4 7899999999999985 6889999997 6667899999999999988763
No 38
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.86 E-value=1.2e-20 Score=106.51 Aligned_cols=88 Identities=42% Similarity=0.588 Sum_probs=80.1
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHH
Q psy3338 58 LHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAASAANEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKIS 137 (152)
Q Consensus 58 L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~ 137 (152)
||+|+..|+.+++++|++.+.+++. + ++|+|+|+..|+.+++++|++.|.+++.++..|+||+++|+..++.+++
T Consensus 1 L~~A~~~~~~~~~~~ll~~~~~~~~----~-~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~ 75 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEKGADINL----G-NTALHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAENGNLEIV 75 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHTTSTTTS----S-SBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTHHHHH
T ss_pred CHHHHHcCCHHHHHHHHHCcCCCCC----C-CCHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHcCCHHHH
Confidence 7899999999999999998887776 4 7999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCccccc
Q psy3338 138 QILLERFSDLQTN 150 (152)
Q Consensus 138 ~~L~~~~~~~~~~ 150 (152)
++|+++|++++..
T Consensus 76 ~~Ll~~g~~~~~~ 88 (89)
T PF12796_consen 76 KLLLEHGADVNIR 88 (89)
T ss_dssp HHHHHTTT-TTSS
T ss_pred HHHHHcCCCCCCc
Confidence 9999999998753
No 39
>PHA02917 ankyrin-like protein; Provisional
Probab=99.86 E-value=2.6e-21 Score=142.67 Aligned_cols=125 Identities=20% Similarity=0.132 Sum_probs=107.7
Q ss_pred hhHHHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHH--HcCCHHHHHHHHhcCCCCCccccC---C---------
Q psy3338 23 IPLTIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAA--RSNNKPICLLLISRGANVNAVTRA---G--------- 87 (152)
Q Consensus 23 ~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~--~~g~~~~~~~L~~~~~~~~~~~~~---~--------- 87 (152)
.+++++|+.+|+.+ +++|+++|+|++.+|..|.||||.++ ..|+.+++++|+++|++++..+.. |
T Consensus 104 ~~~~~~a~~~~~~e~vk~Ll~~Gadin~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~d~~~~~g~~~~~~~~~ 183 (661)
T PHA02917 104 NIFSYMKSKNVDVDLIKVLVEHGFDLSVKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVLYEDEDDEYGYAYDDYQPR 183 (661)
T ss_pred chHHHHHhhcCCHHHHHHHHHcCCCCCccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCcccccccccccccccccccc
Confidence 46667889999999 99999999999999999999999654 578999999999999999755422 1
Q ss_pred -CcCHHHHHHH-----------cCCHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcH--HHHHHHHHhCCccc
Q psy3338 88 -QATPLHRAAS-----------AANEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHE--KISQILLERFSDLQ 148 (152)
Q Consensus 88 -~~~~l~~a~~-----------~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~--~i~~~L~~~~~~~~ 148 (152)
+.||||+|+. .++.+++++|++.|++++.++..|.||||+|+..|+. +++++|++ |+++.
T Consensus 184 ~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadvn~~d~~G~TpLh~A~~~g~~~~eivk~Li~-g~d~~ 257 (661)
T PHA02917 184 NCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIKPSSIDKNYCTALQYYIKSSHIDIDIVKLLMK-GIDNT 257 (661)
T ss_pred ccccHHHHHHhhcccccccccccCcHHHHHHHHHCCCCcccCCCCCCcHHHHHHHcCCCcHHHHHHHHh-CCccc
Confidence 1499999986 4588999999999999999999999999999999985 79999974 87653
No 40
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.86 E-value=9.3e-21 Score=141.35 Aligned_cols=129 Identities=27% Similarity=0.263 Sum_probs=100.9
Q ss_pred cCCCChhHHHHHHHcCCCC--CCCcCCCCCCCCCCCCCCccHHHHHHHcC-CHHHHHHHHhcCCCCCccccCCCcCHHHH
Q psy3338 18 ILPEHIPLTIILLTTGRYP--PGHLPICSVDPNIPDNAGYTALHYAARSN-NKPICLLLISRGANVNAVTRAGQATPLHR 94 (152)
Q Consensus 18 ~~~~~~~~~~~a~~~g~~~--v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g-~~~~~~~L~~~~~~~~~~~~~~~~~~l~~ 94 (152)
...|.||++ +|+..|+.+ ++.|++.|++++.+|..|.||||+|+..| ..+++++|+..|++++..+..+ +||||+
T Consensus 270 d~~g~TpLh-~Aa~~~~~~~iv~lLl~~gadin~~d~~g~TpLh~Aa~~g~~~~~v~~Ll~~gadin~~d~~g-~TpLh~ 347 (682)
T PHA02876 270 DDCKNTPLH-HASQAPSLSRLVPKLLERGADVNAKNIKGETPLYLMAKNGYDTENIRTLIMLGADVNAADRLY-ITPLHQ 347 (682)
T ss_pred CCCCCCHHH-HHHhCCCHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCCHHHHHHHHHcCCCCCCcccCC-CcHHHH
Confidence 345777774 466666654 77778888888888888888888888888 4778888888888888777777 788888
Q ss_pred HHHcC-CHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHhCCccc
Q psy3338 95 AASAA-NEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKISQILLERFSDLQ 148 (152)
Q Consensus 95 a~~~~-~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~~~~ 148 (152)
|+..+ ..++++.|++.|++++.++..|.||||+|+..++.+++++|+++|++++
T Consensus 348 A~~~~~~~~iv~lLl~~gadin~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~gad~~ 402 (682)
T PHA02876 348 ASTLDRNKDIVITLLELGANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGADIE 402 (682)
T ss_pred HHHhCCcHHHHHHHHHcCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcc
Confidence 87754 5677778888888888888888888888888888888888888887765
No 41
>KOG0512|consensus
Probab=99.85 E-value=5.7e-21 Score=115.96 Aligned_cols=117 Identities=31% Similarity=0.327 Sum_probs=102.9
Q ss_pred hHHHHHHHcCCCC-CCCcCCCCCC-CCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHHHcCCH
Q psy3338 24 PLTIILLTTGRYP-PGHLPICSVD-PNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAASAANE 101 (152)
Q Consensus 24 ~~~~~a~~~g~~~-v~~Ll~~~~~-~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~~~~~ 101 (152)
-++.+|+..+.+. |+.|++..++ +|.+|..|+||||-|+.+|+.+++..|+..|++.+.+...| |||||.||...+.
T Consensus 65 rl~lwaae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~~G-WTPLhSAckWnN~ 143 (228)
T KOG0512|consen 65 RLLLWAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKTNEG-WTPLHSACKWNNF 143 (228)
T ss_pred HHHHHHHhhccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCCcccccccC-ccchhhhhcccch
Confidence 3567888888888 9988876654 89999999999999999999999999999999999998888 9999999999999
Q ss_pred HHHHHHHhcCCCCCccCCCCCcHHHHHHhcCc-HHHHHHHH
Q psy3338 102 EIVTLLLDNGADSTLKDSDGLTALDRSRKESH-EKISQILL 141 (152)
Q Consensus 102 ~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~-~~i~~~L~ 141 (152)
+++..|+.+|++++.......||||+|+...+ ...+.+|+
T Consensus 144 ~va~~LLqhgaDVnA~t~g~ltpLhlaa~~rn~r~t~~~Ll 184 (228)
T KOG0512|consen 144 EVAGRLLQHGADVNAQTKGLLTPLHLAAGNRNSRDTLELLL 184 (228)
T ss_pred hHHHHHHhccCcccccccccchhhHHhhcccchHHHHHHHh
Confidence 99999999999999999999999999988765 44555554
No 42
>PHA02795 ankyrin-like protein; Provisional
Probab=99.84 E-value=1.5e-20 Score=131.26 Aligned_cols=128 Identities=13% Similarity=-0.019 Sum_probs=109.9
Q ss_pred CCCChhHHHHHH-HcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccc------cCCCcC
Q psy3338 19 LPEHIPLTIILL-TTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVT------RAGQAT 90 (152)
Q Consensus 19 ~~~~~~~~~~a~-~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~------~~~~~~ 90 (152)
....++++.++. ..|+.+ +++|+++|+|++.++ +.||+|.|+..++.+++++|+.+|++..... ..+ .+
T Consensus 114 ~~~~~~L~~~~~n~~n~~eiV~~LI~~GADIn~~~--~~t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~-~t 190 (437)
T PHA02795 114 NSVQDLLLYYLSNAYVEIDIVDFMVDHGAVIYKIE--CLNAYFRGICKKESSVVEFILNCGIPDENDVKLDLYKIIQ-YT 190 (437)
T ss_pred ccccHHHHHHHHhcCCCHHHHHHHHHCCCCCCCCC--CCCHHHHHHHcCcHHHHHHHHhcCCcccccccchhhhhhc-cc
Confidence 446777755443 268888 999999999998854 4799999999999999999999997543222 224 68
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHhCCcccc
Q psy3338 91 PLHRAASAANEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKISQILLERFSDLQT 149 (152)
Q Consensus 91 ~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~~~~~ 149 (152)
++|.+...+..+++++|++.|++++.++..|.|||++|+..|+.+++++|+++|++++.
T Consensus 191 ~l~~a~~~~~~eIve~LIs~GADIN~kD~~G~TpLh~Aa~~g~~eiVelLL~~GAdIN~ 249 (437)
T PHA02795 191 RGFLVDEPTVLEIYKLCIPYIEDINQLDAGGRTLLYRAIYAGYIDLVSWLLENGANVNA 249 (437)
T ss_pred hhHHHHhcCHHHHHHHHHhCcCCcCcCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999875
No 43
>KOG4177|consensus
Probab=99.84 E-value=1.1e-20 Score=142.99 Aligned_cols=119 Identities=28% Similarity=0.381 Sum_probs=107.3
Q ss_pred HHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHHHcCCHHHHH
Q psy3338 27 IILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAASAANEEIVT 105 (152)
Q Consensus 27 ~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~ 105 (152)
+.+...+... ++.++++|++++.++..|+||||.|+.+|+..+|++|+++|++++.+++.+ +||||.|+..|+.+++.
T Consensus 512 hla~~~~~v~~~~~l~~~ga~v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~gAdv~ak~~~G-~TPLH~Aa~~G~~~i~~ 590 (1143)
T KOG4177|consen 512 HLAADEDTVKVAKILLEHGANVDLRTGRGYTPLHVAVHYGNVDLVKFLLEHGADVNAKDKLG-YTPLHQAAQQGHNDIAE 590 (1143)
T ss_pred hhhhhhhhHHHHHHHhhcCCceehhcccccchHHHHHhcCCchHHHHhhhCCccccccCCCC-CChhhHHHHcChHHHHH
Confidence 3344555555 667777888999999999999999999999999999999999999999777 99999999999999999
Q ss_pred HHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHhCCc
Q psy3338 106 LLLDNGADSTLKDSDGLTALDRSRKESHEKISQILLERFSD 146 (152)
Q Consensus 106 ~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~~ 146 (152)
+|+++|+++|..+.+|.|||++|...|+.++++.|+..+..
T Consensus 591 LLlk~GA~vna~d~~g~TpL~iA~~lg~~~~~k~l~~~~~~ 631 (1143)
T KOG4177|consen 591 LLLKHGASVNAADLDGFTPLHIAVRLGYLSVVKLLKVVTAT 631 (1143)
T ss_pred HHHHcCCCCCcccccCcchhHHHHHhcccchhhHHHhccCc
Confidence 99999999999999999999999999999999999988877
No 44
>PHA02917 ankyrin-like protein; Provisional
Probab=99.83 E-value=3.4e-20 Score=136.81 Aligned_cols=139 Identities=12% Similarity=0.070 Sum_probs=112.4
Q ss_pred hhccCCCCccccCCCChhHHHH--HHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHH----HHHHHHhcCCC
Q psy3338 7 FCWNDLPTCKPILPEHIPLTII--LLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKP----ICLLLISRGAN 79 (152)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~--a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~----~~~~L~~~~~~ 79 (152)
+...+.+.......|.||+|.+ ++..|+.+ ++.|++.|++++.++..|.||||+|+..|+.+ +++.|++.+..
T Consensus 18 l~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~v~~Ll~~ga~v~~~~~~g~TpL~~Aa~~g~~~v~~~~~~~Ll~~~~~ 97 (661)
T PHA02917 18 MLRDRDPNDTRNQFKNNALHAYLFNEHCNNVEVVKLLLDSGTNPLHKNWRQLTPLEEYTNSRHVKVNKDIAMALLEATGY 97 (661)
T ss_pred HHhccCcccccCCCCCcHHHHHHHhhhcCcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCChhHHHHHHHHHHhccCC
Confidence 3334444444467789998653 45558889 99999999999999999999999999999854 56777766443
Q ss_pred CCccccCCCcCHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCcHHHHH--HhcCcHHHHHHHHHhCCccc
Q psy3338 80 VNAVTRAGQATPLHRAASAANEEIVTLLLDNGADSTLKDSDGLTALDRS--RKESHEKISQILLERFSDLQ 148 (152)
Q Consensus 80 ~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a--~~~~~~~i~~~L~~~~~~~~ 148 (152)
.+..+ . .+++++|+..++.+++++|++.|++++.++..|.|||+.+ ...++.+++++|+++|++++
T Consensus 98 ~n~~~--~-~~~~~~a~~~~~~e~vk~Ll~~Gadin~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn 165 (661)
T PHA02917 98 SNIND--F-NIFSYMKSKNVDVDLIKVLVEHGFDLSVKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVL 165 (661)
T ss_pred CCCCC--c-chHHHHHhhcCCHHHHHHHHHcCCCCCccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCcc
Confidence 44433 2 3677889999999999999999999999999999999954 45789999999999999986
No 45
>PHA02730 ankyrin-like protein; Provisional
Probab=99.83 E-value=4.8e-20 Score=134.33 Aligned_cols=129 Identities=17% Similarity=0.135 Sum_probs=110.3
Q ss_pred CCCChhHHHHHHHcCC---CC-CCCcCCCCC--CCCCCCCCCccHHHH---HHHcC---------CHHHHHHHHhcCCCC
Q psy3338 19 LPEHIPLTIILLTTGR---YP-PGHLPICSV--DPNIPDNAGYTALHY---AARSN---------NKPICLLLISRGANV 80 (152)
Q Consensus 19 ~~~~~~~~~~a~~~g~---~~-v~~Ll~~~~--~~~~~~~~g~~~L~~---a~~~g---------~~~~~~~L~~~~~~~ 80 (152)
..|.||++.+|..+++ .+ +++|+++|+ +++.+|..|.||||. +...+ ..+++++|+.+|+++
T Consensus 376 ~~G~TpLH~Aa~~nnn~i~~eIvelLIs~Ga~~dIN~kd~~G~T~Lh~~i~a~~~n~~~~~~e~~~~~ivk~LIs~GADI 455 (672)
T PHA02730 376 TDNNYPLHDYFVNNNNIVDVNVVRFIVENNGHMAINHVSNNGRLCMYGLILSRFNNCGYHCYETILIDVFDILSKYMDDI 455 (672)
T ss_pred CCCCcHHHHHHHHcCCcchHHHHHHHHHcCCCccccccccCCCchHhHHHHHHhccccccccchhHHHHHHHHHhcccch
Confidence 6789999776666654 57 999999987 688899999999984 33232 235689999999999
Q ss_pred CccccCCCcCHHHHHHHcCCHHHHHHHHhcCCCCCccCC-CCCcHHHHHHhc--CcHHHHHHHHHhCCccc
Q psy3338 81 NAVTRAGQATPLHRAASAANEEIVTLLLDNGADSTLKDS-DGLTALDRSRKE--SHEKISQILLERFSDLQ 148 (152)
Q Consensus 81 ~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~-~~~~~l~~a~~~--~~~~i~~~L~~~~~~~~ 148 (152)
+.++..| +||||+|+..++.+++++|++.|++++..+. .|.||+++|+.. ++.+++++|+++|++++
T Consensus 456 NakD~~G-~TPLh~Aa~~~~~eive~LI~~GAdIN~~d~~~g~TaL~~Aa~~~~~~~eIv~~LLs~ga~i~ 525 (672)
T PHA02730 456 DMIDNEN-KTLLYYAVDVNNIQFARRLLEYGASVNTTSRSIINTAIQKSSYRRENKTKLVDLLLSYHPTLE 525 (672)
T ss_pred hccCCCC-CCHHHHHHHhCCHHHHHHHHHCCCCCCCCCCcCCcCHHHHHHHhhcCcHHHHHHHHHcCCCHH
Confidence 9999888 8999999999999999999999999999996 599999999874 78999999999999875
No 46
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.83 E-value=1.6e-20 Score=106.03 Aligned_cols=88 Identities=41% Similarity=0.558 Sum_probs=79.5
Q ss_pred HHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHHHcCCHHHH
Q psy3338 26 TIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAASAANEEIV 104 (152)
Q Consensus 26 ~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~ 104 (152)
++.|++.|+.+ +++|++.+.+++. |.||||+|+..|+.+++++|+++|++++..+..+ +||+|+|+..++.+++
T Consensus 1 L~~A~~~~~~~~~~~ll~~~~~~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g-~t~L~~A~~~~~~~~~ 75 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEKGADINL----GNTALHYAAENGNLEIVKLLLENGADINSQDKNG-NTALHYAAENGNLEIV 75 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHTTSTTTS----SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTS-SBHHHHHHHTTHHHHH
T ss_pred CHHHHHcCCHHHHHHHHHCcCCCCC----CCCHHHHHHHcCCHHHHHHHHHhcccccccCCCC-CCHHHHHHHcCCHHHH
Confidence 47899999999 9999999988877 8899999999999999999999999999998777 9999999999999999
Q ss_pred HHHHhcCCCCCccC
Q psy3338 105 TLLLDNGADSTLKD 118 (152)
Q Consensus 105 ~~Ll~~g~~~~~~~ 118 (152)
++|+++|++++.+|
T Consensus 76 ~~Ll~~g~~~~~~n 89 (89)
T PF12796_consen 76 KLLLEHGADVNIRN 89 (89)
T ss_dssp HHHHHTTT-TTSS-
T ss_pred HHHHHcCCCCCCcC
Confidence 99999999988764
No 47
>KOG0195|consensus
Probab=99.82 E-value=1.6e-20 Score=122.64 Aligned_cols=130 Identities=26% Similarity=0.271 Sum_probs=88.3
Q ss_pred ccCCCChhHHHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHH
Q psy3338 17 PILPEHIPLTIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRA 95 (152)
Q Consensus 17 ~~~~~~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a 95 (152)
...-+.+|+ |+|++.|+.. ++.|+..|+.+|..+....||||.|+..|+.++++.|+++.++++..+..| +||||+|
T Consensus 30 gddhgfspl-hwaakegh~aivemll~rgarvn~tnmgddtplhlaaahghrdivqkll~~kadvnavnehg-ntplhya 107 (448)
T KOG0195|consen 30 GDDHGFSPL-HWAAKEGHVAIVEMLLSRGARVNSTNMGDDTPLHLAAAHGHRDIVQKLLSRKADVNAVNEHG-NTPLHYA 107 (448)
T ss_pred ccccCcchh-hhhhhcccHHHHHHHHhcccccccccCCCCcchhhhhhcccHHHHHHHHHHhcccchhhccC-CCchhhh
Confidence 334455555 5567777777 777777777777777666777777777777777777777777777777766 6777777
Q ss_pred HHcCCHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHhCCccc
Q psy3338 96 ASAANEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKISQILLERFSDLQ 148 (152)
Q Consensus 96 ~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~~~~ 148 (152)
|..|...+.+-|+..|+.++..+++|.||+..|...-..-+.+.-.++|.+++
T Consensus 108 cfwgydqiaedli~~ga~v~icnk~g~tpldkakp~l~~~l~e~aek~gq~~n 160 (448)
T KOG0195|consen 108 CFWGYDQIAEDLISCGAAVNICNKKGMTPLDKAKPMLKNTLLEIAEKHGQSPN 160 (448)
T ss_pred hhhcHHHHHHHHHhccceeeecccCCCCchhhhchHHHHHHHHHHHHhCCCCC
Confidence 77777777777777777777777777777776654433334444444554443
No 48
>KOG0502|consensus
Probab=99.82 E-value=3.4e-20 Score=116.61 Aligned_cols=104 Identities=28% Similarity=0.373 Sum_probs=98.8
Q ss_pred CCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCcHH
Q psy3338 46 DPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAASAANEEIVTLLLDNGADSTLKDSDGLTAL 125 (152)
Q Consensus 46 ~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~l 125 (152)
.+|..|+.|.|||.+|++.|+.+++++|++.|+++....... .++|..|+..|..+++++|+.++.++|..|..|.|||
T Consensus 152 ~VN~~De~GfTpLiWAaa~G~i~vV~fLL~~GAdp~~lgk~r-esALsLAt~ggytdiV~lLL~r~vdVNvyDwNGgTpL 230 (296)
T KOG0502|consen 152 KVNACDEFGFTPLIWAAAKGHIPVVQFLLNSGADPDALGKYR-ESALSLATRGGYTDIVELLLTREVDVNVYDWNGGTPL 230 (296)
T ss_pred cccCccccCchHhHHHHhcCchHHHHHHHHcCCChhhhhhhh-hhhHhHHhcCChHHHHHHHHhcCCCcceeccCCCcee
Confidence 467889999999999999999999999999999999888777 7999999999999999999999999999999999999
Q ss_pred HHHHhcCcHHHHHHHHHhCCccccc
Q psy3338 126 DRSRKESHEKISQILLERFSDLQTN 150 (152)
Q Consensus 126 ~~a~~~~~~~i~~~L~~~~~~~~~~ 150 (152)
-+|++-++.++++.|++.|++++.+
T Consensus 231 lyAvrgnhvkcve~Ll~sGAd~t~e 255 (296)
T KOG0502|consen 231 LYAVRGNHVKCVESLLNSGADVTQE 255 (296)
T ss_pred eeeecCChHHHHHHHHhcCCCcccc
Confidence 9999999999999999999998754
No 49
>PHA02730 ankyrin-like protein; Provisional
Probab=99.81 E-value=1.3e-19 Score=132.17 Aligned_cols=129 Identities=16% Similarity=0.098 Sum_probs=109.4
Q ss_pred cCCCChhHHHHHHHcC---CCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcC--CHHHHHHHHhcCCCC--CccccCCCc
Q psy3338 18 ILPEHIPLTIILLTTG---RYP-PGHLPICSVDPNIPDNAGYTALHYAARSN--NKPICLLLISRGANV--NAVTRAGQA 89 (152)
Q Consensus 18 ~~~~~~~~~~~a~~~g---~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g--~~~~~~~L~~~~~~~--~~~~~~~~~ 89 (152)
...|.||+|+ |+.+| +.+ ++.|+++|+|++.+|..|.||||+|+..+ +.+++++|++.|++. +..+..+ .
T Consensus 38 d~~G~TaLh~-A~~~~~~~~~eivklLLs~GAdin~kD~~G~TPLh~Aa~~~~~~~eIv~~Ll~~~~~~~~~~~~~~~-d 115 (672)
T PHA02730 38 DRRGNNALHC-YVSNKCDTDIKIVRLLLSRGVERLCRNNEGLTPLGVYSKRKYVKSQIVHLLISSYSNASNELTSNIN-D 115 (672)
T ss_pred CCCCCcHHHH-HHHcCCcCcHHHHHHHHhCCCCCcccCCCCCChHHHHHHcCCCcHHHHHHHHhcCCCCCcccccccC-C
Confidence 3457888855 55565 578 99999999999999999999999999977 799999999997655 5566556 7
Q ss_pred CHHHHHHH--cCCHHHHHHHHh-cCCCCCccCC-----CCCcHHHHHHhcCcHHHHHHHHHhCCccc
Q psy3338 90 TPLHRAAS--AANEEIVTLLLD-NGADSTLKDS-----DGLTALDRSRKESHEKISQILLERFSDLQ 148 (152)
Q Consensus 90 ~~l~~a~~--~~~~~~~~~Ll~-~g~~~~~~~~-----~~~~~l~~a~~~~~~~i~~~L~~~~~~~~ 148 (152)
+|++.++. .++.+++++|+. .+++++.... .|.+|++++...++.+|+++|+++|++++
T Consensus 116 ~~l~~y~~s~n~~~~~vk~Li~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~eIvklLi~~g~~v~ 182 (672)
T PHA02730 116 FDLYSYMSSDNIDLRLLKYLIVDKRIRPSKNTNYYIHCLGLVDIYVTTPNPRPEVLLWLLKSECYST 182 (672)
T ss_pred chHHHHHHhcCCcHHHHHHHHHhcCCChhhhhhhhccccchhhhhHhcCCCchHHHHHHHHcCCccc
Confidence 89999888 888999999996 6677765532 78999999999999999999999999984
No 50
>KOG4177|consensus
Probab=99.81 E-value=1.2e-19 Score=137.46 Aligned_cols=131 Identities=30% Similarity=0.436 Sum_probs=104.3
Q ss_pred cCCCChhHHHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHH
Q psy3338 18 ILPEHIPLTIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAA 96 (152)
Q Consensus 18 ~~~~~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~ 96 (152)
...|.||+ +.|+..|+.+ +..|++.++..+.....+-+++|.+...+....++.++.+|+.++.++..+ .||||.|+
T Consensus 471 s~~G~T~L-hlaaq~Gh~~~~~llle~~~~~~~~~~~~l~~lhla~~~~~v~~~~~l~~~ga~v~~~~~r~-~TpLh~A~ 548 (1143)
T KOG4177|consen 471 SKQGFTPL-HLAAQEGHTEVVQLLLEGGANDNLDAKKGLTPLHLAADEDTVKVAKILLEHGANVDLRTGRG-YTPLHVAV 548 (1143)
T ss_pred ccccCcch-hhhhccCCchHHHHhhhcCCccCccchhccchhhhhhhhhhHHHHHHHhhcCCceehhcccc-cchHHHHH
Confidence 34455555 4455666666 555555555555555566666666666666666667777778888888877 89999999
Q ss_pred HcCCHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHhCCccccc
Q psy3338 97 SAANEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKISQILLERFSDLQTN 150 (152)
Q Consensus 97 ~~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~~~~~~ 150 (152)
.+|+.+++++|+++|++++.+++.|+||||.|+..|+.+|+.+|+++|++++..
T Consensus 549 ~~g~v~~VkfLLe~gAdv~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~vna~ 602 (1143)
T KOG4177|consen 549 HYGNVDLVKFLLEHGADVNAKDKLGYTPLHQAAQQGHNDIAELLLKHGASVNAA 602 (1143)
T ss_pred hcCCchHHHHhhhCCccccccCCCCCChhhHHHHcChHHHHHHHHHcCCCCCcc
Confidence 999999999999999999999999999999999999999999999999999853
No 51
>KOG0514|consensus
Probab=99.81 E-value=4e-20 Score=123.72 Aligned_cols=126 Identities=27% Similarity=0.332 Sum_probs=66.8
Q ss_pred ccccCCCChhHHHHHHHcCCCC-CCCcCCCC-CCCCCCCCCCccHHHHHHHcC-----CHHHHHHHHhcCCCCCccccCC
Q psy3338 15 CKPILPEHIPLTIILLTTGRYP-PGHLPICS-VDPNIPDNAGYTALHYAARSN-----NKPICLLLISRGANVNAVTRAG 87 (152)
Q Consensus 15 ~~~~~~~~~~~~~~a~~~g~~~-v~~Ll~~~-~~~~~~~~~g~~~L~~a~~~g-----~~~~~~~L~~~~~~~~~~~~~~ 87 (152)
+.+...|.|.+ |+++.+++++ |..|++.| +++|..+..|+||+++++... +.++|..|+..| ++|.+-...
T Consensus 262 NlaDsNGNTAL-HYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mg-nVNaKAsQ~ 339 (452)
T KOG0514|consen 262 NLADSNGNTAL-HYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMG-DVNAKASQH 339 (452)
T ss_pred hhhcCCCCeee-eeeecccchHHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhcc-Ccchhhhhh
Confidence 34555666666 5677777777 77777665 466666666666655544321 233444444433 233222222
Q ss_pred CcCHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHH
Q psy3338 88 QATPLHRAASAANEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKISQILLE 142 (152)
Q Consensus 88 ~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~ 142 (152)
|.|+|++|+.+|+.++++.|+..|+++|..|.+|.|+|++|+++|+.+|+++|+.
T Consensus 340 gQTALMLAVSHGr~d~vk~LLacgAdVNiQDdDGSTALMCA~EHGhkEivklLLA 394 (452)
T KOG0514|consen 340 GQTALMLAVSHGRVDMVKALLACGADVNIQDDDGSTALMCAAEHGHKEIVKLLLA 394 (452)
T ss_pred cchhhhhhhhcCcHHHHHHHHHccCCCccccCCccHHHhhhhhhChHHHHHHHhc
Confidence 2455555555555555555555555555555555555555555555555555543
No 52
>KOG0195|consensus
Probab=99.80 E-value=1.6e-19 Score=118.00 Aligned_cols=121 Identities=27% Similarity=0.330 Sum_probs=106.1
Q ss_pred HHHHHcCCCCCCCcC-CCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHHHcCCHHHHH
Q psy3338 27 IILLTTGRYPPGHLP-ICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAASAANEEIVT 105 (152)
Q Consensus 27 ~~a~~~g~~~v~~Ll-~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~ 105 (152)
.++-+.+.+.|+..+ +..-|.|..|..|.+|||+||+.|+..+++.|+++|+.++..+... .||||.|+.+|+.++++
T Consensus 6 ~wcregna~qvrlwld~tehdln~gddhgfsplhwaakegh~aivemll~rgarvn~tnmgd-dtplhlaaahghrdivq 84 (448)
T KOG0195|consen 6 GWCREGNAFQVRLWLDDTEHDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGARVNSTNMGD-DTPLHLAAAHGHRDIVQ 84 (448)
T ss_pred hhhhcCCeEEEEEEecCcccccccccccCcchhhhhhhcccHHHHHHHHhcccccccccCCC-CcchhhhhhcccHHHHH
Confidence 333333333455444 4567899999999999999999999999999999999999888766 79999999999999999
Q ss_pred HHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHhCCccc
Q psy3338 106 LLLDNGADSTLKDSDGLTALDRSRKESHEKISQILLERFSDLQ 148 (152)
Q Consensus 106 ~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~~~~ 148 (152)
.|+...++++..+..|.||||+||.-|+..+.+-|+..|+.++
T Consensus 85 kll~~kadvnavnehgntplhyacfwgydqiaedli~~ga~v~ 127 (448)
T KOG0195|consen 85 KLLSRKADVNAVNEHGNTPLHYACFWGYDQIAEDLISCGAAVN 127 (448)
T ss_pred HHHHHhcccchhhccCCCchhhhhhhcHHHHHHHHHhccceee
Confidence 9999999999999999999999999999999999999998765
No 53
>KOG0510|consensus
Probab=99.80 E-value=2e-19 Score=130.60 Aligned_cols=128 Identities=27% Similarity=0.307 Sum_probs=110.4
Q ss_pred CCCChhHHHHHHHcCCCC-CCCcCCCCCC---------------CCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCc
Q psy3338 19 LPEHIPLTIILLTTGRYP-PGHLPICSVD---------------PNIPDNAGYTALHYAARSNNKPICLLLISRGANVNA 82 (152)
Q Consensus 19 ~~~~~~~~~~a~~~g~~~-v~~Ll~~~~~---------------~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~ 82 (152)
..+.+|+ |.|+++|+++ ++..++.|.. ++..|..|.||||+||+.|..+.+..|+..|++++.
T Consensus 223 n~~~~pL-hlAve~g~~e~lk~~L~n~~~~a~~~~~~~~q~kelv~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~I~~ 301 (929)
T KOG0510|consen 223 NEKATPL-HLAVEGGDIEMLKMCLQNGKKIADVQLDAMQQEKELVNDEDNDGCTPLHYAARQGGPESVDNLLGFGASINS 301 (929)
T ss_pred CCCCcch-hhhhhcCCHHHHHHHHhCccccchhhhHHHHHHHHHhhcccccCCchHHHHHHcCChhHHHHHHHcCCcccc
Confidence 3455666 7799999999 8888876532 345788899999999999999999999999999999
Q ss_pred cccCCCcCHHHHHHHcCCHHHHHHHHh-cC-CCCCccCCCCCcHHHHHHhcCcHHHHHHHHHhCCccc
Q psy3338 83 VTRAGQATPLHRAASAANEEIVTLLLD-NG-ADSTLKDSDGLTALDRSRKESHEKISQILLERFSDLQ 148 (152)
Q Consensus 83 ~~~~~~~~~l~~a~~~~~~~~~~~Ll~-~g-~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~~~~ 148 (152)
++..+ .||||.|+++|+.++++.|++ .+ ...+..|..|.||||+|++.|+..+++.|+++|+...
T Consensus 302 kn~d~-~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tpLHlaa~~gH~~v~qlLl~~GA~~~ 368 (929)
T KOG0510|consen 302 KNKDE-ESPLHFAAIYGRINTVERLLQESDTRLLNESDLHGMTPLHLAAKSGHDRVVQLLLNKGALFL 368 (929)
T ss_pred cCCCC-CCchHHHHHcccHHHHHHHHhCcCccccccccccCCCchhhhhhcCHHHHHHHHHhcChhhh
Confidence 98888 899999999999999999997 44 4467788899999999999999999999999998765
No 54
>PHA02741 hypothetical protein; Provisional
Probab=99.80 E-value=1.5e-18 Score=108.92 Aligned_cols=102 Identities=26% Similarity=0.277 Sum_probs=89.9
Q ss_pred CCCCCCCCccHHHHHHHcCCHHHHHHHHh------cCCCCCccccCCCcCHHHHHHHcCC----HHHHHHHHhcCCCCCc
Q psy3338 47 PNIPDNAGYTALHYAARSNNKPICLLLIS------RGANVNAVTRAGQATPLHRAASAAN----EEIVTLLLDNGADSTL 116 (152)
Q Consensus 47 ~~~~~~~g~~~L~~a~~~g~~~~~~~L~~------~~~~~~~~~~~~~~~~l~~a~~~~~----~~~~~~Ll~~g~~~~~ 116 (152)
++.++..|.||||+|+..|+.+++++|+. .+++++.++..+ +||||+|+..++ .+++++|++.|++++.
T Consensus 14 ~~~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g-~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~ 92 (169)
T PHA02741 14 IAEKNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAG-QMCIHIAAEKHEAQLAAEIIDHLIELGADINA 92 (169)
T ss_pred hhccccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCC-CcHHHHHHHcCChHHHHHHHHHHHHcCCCCCC
Confidence 45677889999999999999999998853 357788888877 899999999998 5889999999999999
Q ss_pred cCC-CCCcHHHHHHhcCcHHHHHHHHH-hCCcccc
Q psy3338 117 KDS-DGLTALDRSRKESHEKISQILLE-RFSDLQT 149 (152)
Q Consensus 117 ~~~-~~~~~l~~a~~~~~~~i~~~L~~-~~~~~~~ 149 (152)
++. .|.||||+|+..++.+++++|+. .|++++.
T Consensus 93 ~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~ 127 (169)
T PHA02741 93 QEMLEGDTALHLAAHRRDHDLAEWLCCQPGIDLHF 127 (169)
T ss_pred CCcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCc
Confidence 885 89999999999999999999997 5887764
No 55
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.80 E-value=1.5e-18 Score=103.34 Aligned_cols=121 Identities=38% Similarity=0.532 Sum_probs=110.2
Q ss_pred CCCChhHHHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHHH
Q psy3338 19 LPEHIPLTIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAAS 97 (152)
Q Consensus 19 ~~~~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~ 97 (152)
..|.+|+ +.|++.++.+ +++|++.+.+.+.++..|.+|+|+|+..++.+++++|+..+...+..+..+ .+|+|+|+.
T Consensus 5 ~~g~t~l-~~a~~~~~~~~i~~li~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~-~~~l~~a~~ 82 (126)
T cd00204 5 EDGRTPL-HLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDG-NTPLHLAAR 82 (126)
T ss_pred cCCCCHH-HHHHHcCcHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCCCC-CCHHHHHHH
Confidence 4567777 5688999999 999999999988999999999999999999999999999998888777667 899999999
Q ss_pred cCCHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHH
Q psy3338 98 AANEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKISQILL 141 (152)
Q Consensus 98 ~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~ 141 (152)
.++.+++++|+..+.+.+..+..+.+|+++|...+..+++++|+
T Consensus 83 ~~~~~~~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll 126 (126)
T cd00204 83 NGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGHLEVVKLLL 126 (126)
T ss_pred cCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCHHHHHHhC
Confidence 99999999999999888889999999999999999999998874
No 56
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.78 E-value=1.6e-18 Score=108.51 Aligned_cols=106 Identities=16% Similarity=0.174 Sum_probs=92.8
Q ss_pred CCCCCCCCCCCCccHHHHHHHcCCH----HHHHHHHhcCCCCCccccCCCcCHHHHHHHcCCHH---HHHHHHhcCCCCC
Q psy3338 43 CSVDPNIPDNAGYTALHYAARSNNK----PICLLLISRGANVNAVTRAGQATPLHRAASAANEE---IVTLLLDNGADST 115 (152)
Q Consensus 43 ~~~~~~~~~~~g~~~L~~a~~~g~~----~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~~~~~~---~~~~Ll~~g~~~~ 115 (152)
++++++..+..+.++||.|++.|+. +++++|.+.+.+++..+..+ +||||+|+..+..+ ++++|++.|++++
T Consensus 9 ~~~~~~~~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~~~d~~g-~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin 87 (166)
T PHA02743 9 NNLGAVEIDEDEQNTFLRICRTGNIYELMEVAPFISGDGHLLHRYDHHG-RQCTHMVAWYDRANAVMKIELLVNMGADIN 87 (166)
T ss_pred cchHHhhhccCCCcHHHHHHHcCCHHHHHHHHHHHhhcchhhhccCCCC-CcHHHHHHHhCccCHHHHHHHHHHcCCCCC
Confidence 4677888888899999999999998 56667888898888888888 89999999998765 4799999999999
Q ss_pred ccC-CCCCcHHHHHHhcCcHHHHHHHHH-hCCcccc
Q psy3338 116 LKD-SDGLTALDRSRKESHEKISQILLE-RFSDLQT 149 (152)
Q Consensus 116 ~~~-~~~~~~l~~a~~~~~~~i~~~L~~-~~~~~~~ 149 (152)
.++ ..|.||||+|+..++.+++++|+. .|++++.
T Consensus 88 ~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~ 123 (166)
T PHA02743 88 ARELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGA 123 (166)
T ss_pred CCCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCccC
Confidence 988 589999999999999999999995 7888764
No 57
>PHA02792 ankyrin-like protein; Provisional
Probab=99.78 E-value=1.2e-18 Score=125.97 Aligned_cols=126 Identities=18% Similarity=0.145 Sum_probs=109.3
Q ss_pred ChhHHHHHHHcCCCC-CCCcCCCCCCCCCCCCCC--ccHHHHHHHcCCHH---HHHHHHhcCCCCCccccCCCcCHHHHH
Q psy3338 22 HIPLTIILLTTGRYP-PGHLPICSVDPNIPDNAG--YTALHYAARSNNKP---ICLLLISRGANVNAVTRAGQATPLHRA 95 (152)
Q Consensus 22 ~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g--~~~L~~a~~~g~~~---~~~~L~~~~~~~~~~~~~~~~~~l~~a 95 (152)
+....+.|+..|+.+ +++|+++|+|++.+|..| .||||+|+.....+ ++++|+.+|++++.++..+ +||||+|
T Consensus 339 ~~n~~~~Aa~~gn~eIVelLIs~GADIN~kD~~g~~~TpLh~A~~n~~~~v~~IlklLIs~GADIN~kD~~G-~TPLh~A 417 (631)
T PHA02792 339 HINKYFQKFDNRDPKVVEYILKNGNVVVEDDDNIINIMPLFPTLSIHESDVLSILKLCKPYIDDINKIDKHG-RSILYYC 417 (631)
T ss_pred cchHHHHHHHcCCHHHHHHHHHcCCchhhhcCCCCChhHHHHHHHhccHhHHHHHHHHHhcCCccccccccC-cchHHHH
Confidence 344456788999999 999999999999998764 69999987766543 5788999999999999888 8999999
Q ss_pred HHcCCHHHHHHHHhcCCCCCccCCCCCcHHHHHHh----------cCcHHHHHHHHHhCCccc
Q psy3338 96 ASAANEEIVTLLLDNGADSTLKDSDGLTALDRSRK----------ESHEKISQILLERFSDLQ 148 (152)
Q Consensus 96 ~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~----------~~~~~i~~~L~~~~~~~~ 148 (152)
+..++.+++++|++.|++++.++..|.||+++|.. ....++++.|+++|++++
T Consensus 418 a~~~n~eivelLLs~GADIN~kD~~G~TpL~~A~~~~~~~~~~i~~~~~~il~lLLs~~p~i~ 480 (631)
T PHA02792 418 IESHSVSLVEWLIDNGADINITTKYGSTCIGICVILAHACIPEIAELYIKILEIILSKLPTIE 480 (631)
T ss_pred HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHHHhcccHHHHHHHHHHHHHHHhcCCChh
Confidence 99999999999999999999999999999999976 223568999999998875
No 58
>KOG0512|consensus
Probab=99.78 E-value=1e-18 Score=106.30 Aligned_cols=115 Identities=33% Similarity=0.362 Sum_probs=101.1
Q ss_pred ccCCCChhHHHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHH
Q psy3338 17 PILPEHIPLTIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRA 95 (152)
Q Consensus 17 ~~~~~~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a 95 (152)
...++-||+ |-|+.+|+.+ +..|+..|++++.+...|+||||.||+..+.+++.+|+++|++++...... .||||.|
T Consensus 93 rD~D~YTpL-HRAaYn~h~div~~ll~~gAn~~a~T~~GWTPLhSAckWnN~~va~~LLqhgaDVnA~t~g~-ltpLhla 170 (228)
T KOG0512|consen 93 RDEDEYTPL-HRAAYNGHLDIVHELLLSGANKEAKTNEGWTPLHSACKWNNFEVAGRLLQHGADVNAQTKGL-LTPLHLA 170 (228)
T ss_pred cccccccHH-HHHHhcCchHHHHHHHHccCCcccccccCccchhhhhcccchhHHHHHHhccCccccccccc-chhhHHh
Confidence 455677888 5699999999 999999999999999999999999999999999999999999999888777 8999999
Q ss_pred HHcCCH-HHHHHHH-hcCCCCCccCCCCCcHHHHHHhcCc
Q psy3338 96 ASAANE-EIVTLLL-DNGADSTLKDSDGLTALDRSRKESH 133 (152)
Q Consensus 96 ~~~~~~-~~~~~Ll-~~g~~~~~~~~~~~~~l~~a~~~~~ 133 (152)
+...+. ..+.+|+ ..+.+...++..+.||+.+|.+.+.
T Consensus 171 a~~rn~r~t~~~Ll~dryi~pg~~nn~eeta~~iARRT~~ 210 (228)
T KOG0512|consen 171 AGNRNSRDTLELLLHDRYIHPGLKNNLEETAFDIARRTSM 210 (228)
T ss_pred hcccchHHHHHHHhhccccChhhhcCccchHHHHHHHhhh
Confidence 987654 5566666 6778888889999999999998754
No 59
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.77 E-value=3.6e-18 Score=129.62 Aligned_cols=120 Identities=26% Similarity=0.258 Sum_probs=100.1
Q ss_pred CCCCccccCCCChhHHHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHc-------------------------
Q psy3338 11 DLPTCKPILPEHIPLTIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARS------------------------- 64 (152)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~------------------------- 64 (152)
+.........|.||+ |.|+..|+.+ ++.|+++|++++.+|..|.||||+|+..
T Consensus 548 G~d~n~~d~~G~TpL-h~Aa~~g~~~~v~~Ll~~gadin~~d~~G~TpL~~A~~~g~~~iv~~L~~~~~~~~~~~~~~~L 626 (823)
T PLN03192 548 KLDPDIGDSKGRTPL-HIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAISAKHHKIFRILYHFASISDPHAAGDLL 626 (823)
T ss_pred CCCCCCCCCCCCCHH-HHHHHcChHHHHHHHHhcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHhcCcccCcccCchHH
Confidence 334445566788888 5588899999 9999999999999999999998865554
Q ss_pred ------CCHHHHHHHHhcCCCCCccccCCCcCHHHHHHHcCCHHHHHHHHhcCCCCCccCCCC-CcHHHHHHhcC
Q psy3338 65 ------NNKPICLLLISRGANVNAVTRAGQATPLHRAASAANEEIVTLLLDNGADSTLKDSDG-LTALDRSRKES 132 (152)
Q Consensus 65 ------g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~-~~~l~~a~~~~ 132 (152)
|+.++++.|+++|++++..+..+ +||||+|+..|+.+++++|++.|++++..+..| .+|..++....
T Consensus 627 ~~Aa~~g~~~~v~~Ll~~Gadin~~d~~G-~TpLh~A~~~g~~~iv~~Ll~~GAdv~~~~~~g~~t~~~l~~~~~ 700 (823)
T PLN03192 627 CTAAKRNDLTAMKELLKQGLNVDSEDHQG-ATALQVAMAEDHVDMVRLLIMNGADVDKANTDDDFSPTELRELLQ 700 (823)
T ss_pred HHHHHhCCHHHHHHHHHCCCCCCCCCCCC-CCHHHHHHHCCcHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHHH
Confidence 45556666778899999998888 899999999999999999999999999999888 89988765543
No 60
>KOG4214|consensus
Probab=99.77 E-value=3.3e-19 Score=97.49 Aligned_cols=102 Identities=31% Similarity=0.388 Sum_probs=90.9
Q ss_pred HHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHHHcCCHHHH
Q psy3338 26 TIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAASAANEEIV 104 (152)
Q Consensus 26 ~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~ 104 (152)
+.+++++|.++ |+..+..|.+++..- .|.+|||+|+-.|..++++||+..|++++.+|..+ .|||..|+..|+.+++
T Consensus 6 ~~W~vkNG~~DeVk~~v~~g~nVn~~~-ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKyg-ITPLLsAvwEGH~~cV 83 (117)
T KOG4214|consen 6 VAWNVKNGEIDEVKQSVNEGLNVNEIY-GGRTPLHYAADYGQLSILEFLISIGANIQDKDKYG-ITPLLSAVWEGHRDCV 83 (117)
T ss_pred HhhhhccCcHHHHHHHHHccccHHHHh-CCcccchHhhhcchHHHHHHHHHhccccCCccccC-CcHHHHHHHHhhHHHH
Confidence 36788999999 998888887777543 78999999999999999999999999999999999 9999999999999999
Q ss_pred HHHHhcCCCCCccCCCCCcHHHHHH
Q psy3338 105 TLLLDNGADSTLKDSDGLTALDRSR 129 (152)
Q Consensus 105 ~~Ll~~g~~~~~~~~~~~~~l~~a~ 129 (152)
++|+..|++...+..+|.+.+..+-
T Consensus 84 klLL~~GAdrt~~~PdG~~~~eate 108 (117)
T KOG4214|consen 84 KLLLQNGADRTIHAPDGTALIEATE 108 (117)
T ss_pred HHHHHcCcccceeCCCchhHHhhcc
Confidence 9999999999888888988876543
No 61
>PHA02792 ankyrin-like protein; Provisional
Probab=99.76 E-value=2.1e-18 Score=124.79 Aligned_cols=127 Identities=14% Similarity=0.077 Sum_probs=111.4
Q ss_pred cccCCCChhHHHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHH-cCCHHHHHHHHhcCCCCC------------
Q psy3338 16 KPILPEHIPLTIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAAR-SNNKPICLLLISRGANVN------------ 81 (152)
Q Consensus 16 ~~~~~~~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~-~g~~~~~~~L~~~~~~~~------------ 81 (152)
.....+..+++..|+.+|++| +++|+.+|+|++.++..+.+|+++|+. .++.+++++|+++|++..
T Consensus 66 ~~n~~~~~~~~~~~s~n~~lElvk~LI~~GAdvN~~~n~~~~~l~ya~~~~~~~eivk~Ll~~Gad~~~~~~~g~~~~~~ 145 (631)
T PHA02792 66 YKNINDFDIFEYLCSDNIDIELLKLLISKGLEINSIKNGINIVEKYATTSNPNVDVFKLLLDKGIPTCSNIQYGYKIIIE 145 (631)
T ss_pred cCccCCccHHHHHHHhcccHHHHHHHHHcCCCcccccCCCCcceeEeecCCCChHHHHHHHHCCCCcccccccCcchhhh
Confidence 345567778889999999999 999999999999999999999999965 699999999999998632
Q ss_pred ------------------------ccccCCCcCHHHHHHHcC-------CHHHHHHHHhcCCCCCccCCCCCcHHHHHHh
Q psy3338 82 ------------------------AVTRAGQATPLHRAASAA-------NEEIVTLLLDNGADSTLKDSDGLTALDRSRK 130 (152)
Q Consensus 82 ------------------------~~~~~~~~~~l~~a~~~~-------~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~ 130 (152)
..+..| .||||+++..+ ..++++.|+++|++++..+..|.||||+|+.
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g-~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~~~~~d~~g~t~l~~~~~ 224 (631)
T PHA02792 146 QITRAEYYNWDDELDDYDYDYTTDYDDRMG-KTVLYYYIITRSQDGYATSLDVINYLISHEKEMRYYTYREHTTLYYYVD 224 (631)
T ss_pred hcccccccchhhhccccccccccccCCCCC-CchHHHHHhhCCcccccCCHHHHHHHHhCCCCcCccCCCCChHHHHHHH
Confidence 123334 89999999998 8999999999999999999999999999999
Q ss_pred cC--cHHHHHHHHHh
Q psy3338 131 ES--HEKISQILLER 143 (152)
Q Consensus 131 ~~--~~~i~~~L~~~ 143 (152)
.. ..+++++|+..
T Consensus 225 ~~~i~~ei~~~L~~~ 239 (631)
T PHA02792 225 KCDIKREIFDALFDS 239 (631)
T ss_pred cccchHHHHHHHHhc
Confidence 99 78999999864
No 62
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.76 E-value=2.2e-17 Score=111.21 Aligned_cols=101 Identities=22% Similarity=0.203 Sum_probs=88.5
Q ss_pred CCCCCCCcc-HHHHHHHcCCHHHHHHHHhcCCCCCccc----cCCCcCHHHHHHHcCCHHHHHHHHhcCCCCCcc-CCCC
Q psy3338 48 NIPDNAGYT-ALHYAARSNNKPICLLLISRGANVNAVT----RAGQATPLHRAASAANEEIVTLLLDNGADSTLK-DSDG 121 (152)
Q Consensus 48 ~~~~~~g~~-~L~~a~~~g~~~~~~~L~~~~~~~~~~~----~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~-~~~~ 121 (152)
..+|..|.+ +|+.|++.|+.+++++|+++|++++.++ ..+ .||||+|+..++.+++++|++.|++++.. +..|
T Consensus 26 ~~~d~~~~~~lL~~A~~~~~~eivk~LL~~GAdiN~~~~~sd~~g-~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g 104 (300)
T PHA02884 26 KKKNKICIANILYSSIKFHYTDIIDAILKLGADPEAPFPLSENSK-TNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAK 104 (300)
T ss_pred hccCcCCCCHHHHHHHHcCCHHHHHHHHHCCCCccccCcccCCCC-CCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCC
Confidence 345666665 5677788899999999999999999764 355 89999999999999999999999999985 4579
Q ss_pred CcHHHHHHhcCcHHHHHHHHHhCCcccc
Q psy3338 122 LTALDRSRKESHEKISQILLERFSDLQT 149 (152)
Q Consensus 122 ~~~l~~a~~~~~~~i~~~L~~~~~~~~~ 149 (152)
.||||.|+..++.+++++|+++|++++.
T Consensus 105 ~TpLh~Aa~~~~~eivklLL~~GAdin~ 132 (300)
T PHA02884 105 ITPLYISVLHGCLKCLEILLSYGADINI 132 (300)
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCCCC
Confidence 9999999999999999999999999874
No 63
>KOG0514|consensus
Probab=99.75 E-value=1.7e-18 Score=115.97 Aligned_cols=90 Identities=36% Similarity=0.448 Sum_probs=65.1
Q ss_pred CCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHHHcCCHHHHHHHHh-cCCCCCccCCCCCcHHHHHHhc
Q psy3338 53 AGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAASAANEEIVTLLLD-NGADSTLKDSDGLTALDRSRKE 131 (152)
Q Consensus 53 ~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~-~g~~~~~~~~~~~~~l~~a~~~ 131 (152)
.|+|+|++|+..|..++++.|+.+|+++|..|..| .|+|++|+.+|+++++++|+. -+++....|.+|.|+|.+|...
T Consensus 339 ~gQTALMLAVSHGr~d~vk~LLacgAdVNiQDdDG-STALMCA~EHGhkEivklLLA~p~cd~sLtD~DgSTAl~IAlea 417 (452)
T KOG0514|consen 339 HGQTALMLAVSHGRVDMVKALLACGADVNIQDDDG-STALMCAAEHGHKEIVKLLLAVPSCDISLTDVDGSTALSIALEA 417 (452)
T ss_pred hcchhhhhhhhcCcHHHHHHHHHccCCCccccCCc-cHHHhhhhhhChHHHHHHHhccCcccceeecCCCchhhhhHHhc
Confidence 46777777777777777777777777777777766 577777777777777777774 3667777777777777777777
Q ss_pred CcHHHHHHHHHh
Q psy3338 132 SHEKISQILLER 143 (152)
Q Consensus 132 ~~~~i~~~L~~~ 143 (152)
|+.+|.-+|..|
T Consensus 418 gh~eIa~mlYa~ 429 (452)
T KOG0514|consen 418 GHREIAVMLYAH 429 (452)
T ss_pred CchHHHHHHHHH
Confidence 777777776655
No 64
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.74 E-value=3.9e-18 Score=128.43 Aligned_cols=124 Identities=19% Similarity=0.141 Sum_probs=105.4
Q ss_pred CCCChhHHHHHHHcCCCC-CCCcCCCCCCCCCCC--------------CCCccHHHHHHHcCCHHHHHHHHhcCCCCCcc
Q psy3338 19 LPEHIPLTIILLTTGRYP-PGHLPICSVDPNIPD--------------NAGYTALHYAARSNNKPICLLLISRGANVNAV 83 (152)
Q Consensus 19 ~~~~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~--------------~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~ 83 (152)
..|.||+ |.|+.+|+.+ ++.|+++|++++.++ ..|.+|||.|+..|+.+++++|+++|++++..
T Consensus 126 ~~G~TpL-hlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gadin~~ 204 (743)
T TIGR00870 126 TPGITAL-HLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPADILTA 204 (743)
T ss_pred CCCCcHH-HHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcCCcchhhH
Confidence 4688888 5588999999 999999999998653 25899999999999999999999999999999
Q ss_pred ccCCCcCHHHHHHHcC---------CHHHHHHHHhcCCCC-------CccCCCCCcHHHHHHhcCcHHHHHHHHHhC
Q psy3338 84 TRAGQATPLHRAASAA---------NEEIVTLLLDNGADS-------TLKDSDGLTALDRSRKESHEKISQILLERF 144 (152)
Q Consensus 84 ~~~~~~~~l~~a~~~~---------~~~~~~~Ll~~g~~~-------~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~ 144 (152)
+..+ +||+|+|+..+ ...+.+.+++.+... +..|..|.||+++|+..|+.+++++|++.+
T Consensus 205 d~~g-~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~el~~i~N~~g~TPL~~A~~~g~~~l~~lLL~~~ 280 (743)
T TIGR00870 205 DSLG-NTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLRDSKELEVILNHQGLTPLKLAAKEGRIVLFRLKLAIK 280 (743)
T ss_pred hhhh-hHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCChHhhhhhcCCCCCCchhhhhhcCCccHHHHHHHHH
Confidence 9888 89999999886 234556666554443 556889999999999999999999999864
No 65
>KOG0505|consensus
Probab=99.73 E-value=7.6e-18 Score=117.48 Aligned_cols=136 Identities=29% Similarity=0.328 Sum_probs=116.2
Q ss_pred CCccccCCCChhHHHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCc---------
Q psy3338 13 PTCKPILPEHIPLTIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNA--------- 82 (152)
Q Consensus 13 ~~~~~~~~~~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~--------- 82 (152)
.......+|-|++|. ++.-.+.+ |++|++.|++++..|..|+||||.|+.-|+..++++|++.|+++..
T Consensus 65 ~~~~~n~DglTalhq-~~id~~~e~v~~l~e~ga~Vn~~d~e~wtPlhaaascg~~~i~~~li~~gA~~~avNsdg~~P~ 143 (527)
T KOG0505|consen 65 SPNLCNVDGLTALHQ-ACIDDNLEMVKFLVENGANVNAQDNEGWTPLHAAASCGYLNIVEYLIQHGANLLAVNSDGNMPY 143 (527)
T ss_pred CccccCCccchhHHH-HHhcccHHHHHHHHHhcCCccccccccCCcchhhcccccHHHHHHHHHhhhhhhhccCCCCCcc
Confidence 334455667777755 66667777 9999999999999999999999999999999999999987654322
Q ss_pred --------------------------------------------------cccCCCcCHHHHHHHcCCHHHHHHHHhcCC
Q psy3338 83 --------------------------------------------------VTRAGQATPLHRAASAANEEIVTLLLDNGA 112 (152)
Q Consensus 83 --------------------------------------------------~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~ 112 (152)
.+..| -|.+|.|.-.|.+++..+|+..|.
T Consensus 144 dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~~G~~~d~~~~rG-~T~lHvAaa~Gy~e~~~lLl~ag~ 222 (527)
T KOG0505|consen 144 DLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLNAGAELDARHARG-ATALHVAAANGYTEVAALLLQAGY 222 (527)
T ss_pred ccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHhcccccccccccc-chHHHHHHhhhHHHHHHHHHHhcc
Confidence 22233 699999999999999999999999
Q ss_pred CCCccCCCCCcHHHHHHhcCcHHHHHHHHHhCCccccc
Q psy3338 113 DSTLKDSDGLTALDRSRKESHEKISQILLERFSDLQTN 150 (152)
Q Consensus 113 ~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~~~~~~ 150 (152)
+++.+|.+|++|||.|+.=|..++.+.|+++|++++..
T Consensus 223 ~~~~~D~dgWtPlHAAA~Wg~~~~~elL~~~ga~~d~~ 260 (527)
T KOG0505|consen 223 SVNIKDYDGWTPLHAAAHWGQEDACELLVEHGADMDAK 260 (527)
T ss_pred CcccccccCCCcccHHHHhhhHhHHHHHHHhhcccchh
Confidence 99999999999999999999999999999999998753
No 66
>KOG3676|consensus
Probab=99.70 E-value=3.8e-17 Score=118.85 Aligned_cols=123 Identities=28% Similarity=0.301 Sum_probs=111.9
Q ss_pred CCCChhHHHHHHHcCCCC-CCCcCCCCCCCCCC-----------------------CCCCccHHHHHHHcCCHHHHHHHH
Q psy3338 19 LPEHIPLTIILLTTGRYP-PGHLPICSVDPNIP-----------------------DNAGYTALHYAARSNNKPICLLLI 74 (152)
Q Consensus 19 ~~~~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~-----------------------~~~g~~~L~~a~~~g~~~~~~~L~ 74 (152)
-.|.|++ |.|+.+.+.+ |+.|++.|+|++.+ -.+|+.||.+|+--++.+++++|+
T Consensus 182 Y~GqSaL-HiAIv~~~~~~V~lLl~~gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl 260 (782)
T KOG3676|consen 182 YYGQSAL-HIAIVNRDAELVRLLLAAGADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLL 260 (782)
T ss_pred hcCcchH-HHHHHhccHHHHHHHHHcCCchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHH
Confidence 3477777 6688999999 99999999988642 236889999999999999999999
Q ss_pred hcCCCCCccccCCCcCHHHHHHHcCCHHHHHHHHhcCCC--CCccCCCCCcHHHHHHhcCcHHHHHHHHHh
Q psy3338 75 SRGANVNAVTRAGQATPLHRAASAANEEIVTLLLDNGAD--STLKDSDGLTALDRSRKESHEKISQILLER 143 (152)
Q Consensus 75 ~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~--~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~ 143 (152)
++|+|++..|..| +|.||..+.+...++.+++++.|++ ...+|..|-|||.+|++.|..+|.+.+++.
T Consensus 261 ~~gAd~~aqDS~G-NTVLH~lVi~~~~~My~~~L~~ga~~l~~v~N~qgLTPLtLAaklGk~emf~~ile~ 330 (782)
T KOG3676|consen 261 AHGADPNAQDSNG-NTVLHMLVIHFVTEMYDLALELGANALEHVRNNQGLTPLTLAAKLGKKEMFQHILER 330 (782)
T ss_pred hcCCCCCccccCC-ChHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCChHHHHHHhhhHHHHHHHHHh
Confidence 9999999999988 9999999999889999999999999 888999999999999999999999999987
No 67
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.70 E-value=8.4e-16 Score=91.37 Aligned_cols=99 Identities=38% Similarity=0.562 Sum_probs=90.3
Q ss_pred CCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCcHHHHH
Q psy3338 49 IPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAASAANEEIVTLLLDNGADSTLKDSDGLTALDRS 128 (152)
Q Consensus 49 ~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a 128 (152)
.++..|.||||+|++.++.+++++|+..+.+.+..+..+ .+|++.|+..+..+++++|+..+.+++..+..+.+|+++|
T Consensus 2 ~~~~~g~t~l~~a~~~~~~~~i~~li~~~~~~~~~~~~g-~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~l~~a 80 (126)
T cd00204 2 ARDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDG-RTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGNTPLHLA 80 (126)
T ss_pred CcCcCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccCCCC-CcHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHH
Confidence 345679999999999999999999999999877777777 8999999999999999999999988888889999999999
Q ss_pred HhcCcHHHHHHHHHhCCccc
Q psy3338 129 RKESHEKISQILLERFSDLQ 148 (152)
Q Consensus 129 ~~~~~~~i~~~L~~~~~~~~ 148 (152)
+..++.+++++|++++.+++
T Consensus 81 ~~~~~~~~~~~L~~~~~~~~ 100 (126)
T cd00204 81 ARNGNLDVVKLLLKHGADVN 100 (126)
T ss_pred HHcCcHHHHHHHHHcCCCCc
Confidence 99999999999999885554
No 68
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.69 E-value=3.7e-16 Score=101.88 Aligned_cols=122 Identities=35% Similarity=0.460 Sum_probs=110.7
Q ss_pred CChhHHHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCC-----HHHHHHHHhcCC---CCCccccCCCcCH
Q psy3338 21 EHIPLTIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNN-----KPICLLLISRGA---NVNAVTRAGQATP 91 (152)
Q Consensus 21 ~~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~-----~~~~~~L~~~~~---~~~~~~~~~~~~~ 91 (152)
..+++ +.++..+..+ +++++..|.+++.++..|.||||+|+..++ .+++++|+..|+ ..+..+..+ +||
T Consensus 73 ~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~g-~tp 150 (235)
T COG0666 73 GRLPL-HSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDEDG-NTP 150 (235)
T ss_pred ccCHH-HHHHHcCcHHHHHHHHHcCCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCCCC-Cch
Confidence 44555 6677888888 889999999999999999999999999999 999999999999 455557777 999
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHhC
Q psy3338 92 LHRAASAANEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKISQILLERF 144 (152)
Q Consensus 92 l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~ 144 (152)
+|+|+..|+.+++..+++.|.+++..+..|.|+++.|+..+...+++.+.+.+
T Consensus 151 l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~l~~~~ 203 (235)
T COG0666 151 LHWAALNGDADIVELLLEAGADPNSRNSYGVTALDPAAKNGRIELVKLLLDKG 203 (235)
T ss_pred hHHHHHcCchHHHHHHHhcCCCCcccccCCCcchhhhcccchHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999865
No 69
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.69 E-value=3.9e-16 Score=117.75 Aligned_cols=61 Identities=33% Similarity=0.373 Sum_probs=52.6
Q ss_pred CcCHHHHHHHcCCHHHHHHHHhcCCCCCccC--------------CCCCcHHHHHHhcCcHHHHHHHHHhCCccc
Q psy3338 88 QATPLHRAASAANEEIVTLLLDNGADSTLKD--------------SDGLTALDRSRKESHEKISQILLERFSDLQ 148 (152)
Q Consensus 88 ~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~--------------~~~~~~l~~a~~~~~~~i~~~L~~~~~~~~ 148 (152)
|.||||+|+..|+.+++++|+++|++++.++ ..|.+||+.|+..++.+++++|+++|++++
T Consensus 128 G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gadin 202 (743)
T TIGR00870 128 GITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPADIL 202 (743)
T ss_pred CCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcCCcchh
Confidence 3799999999999999999999998887542 358899999999999999999999998765
No 70
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.68 E-value=5.5e-17 Score=100.48 Aligned_cols=96 Identities=21% Similarity=0.186 Sum_probs=84.1
Q ss_pred cCCCChhHHHHHHHcCCCC----CCCcCCCCCCCCCCCC-CCccHHHHHHHcCCHHHHHHHHh-cCCCCCccccCCCcCH
Q psy3338 18 ILPEHIPLTIILLTTGRYP----PGHLPICSVDPNIPDN-AGYTALHYAARSNNKPICLLLIS-RGANVNAVTRAGQATP 91 (152)
Q Consensus 18 ~~~~~~~~~~~a~~~g~~~----v~~Ll~~~~~~~~~~~-~g~~~L~~a~~~g~~~~~~~L~~-~~~~~~~~~~~~~~~~ 91 (152)
...|.||+ |+|+..|+.+ +++|++.|++++.++. .|.||||+|+..|+.+++++|+. .+++++..+..+ .||
T Consensus 52 d~~g~t~L-h~a~~~~~~~~~e~v~~Ll~~gadin~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g-~tp 129 (154)
T PHA02736 52 NRHGKQCV-HIVSNPDKADPQEKLKLLMEWGADINGKERVFGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAF-KTP 129 (154)
T ss_pred cCCCCEEE-EeecccCchhHHHHHHHHHHcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCC-CCH
Confidence 34577888 5577888764 6788999999999984 89999999999999999999997 589999888888 899
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCC
Q psy3338 92 LHRAASAANEEIVTLLLDNGADST 115 (152)
Q Consensus 92 l~~a~~~~~~~~~~~Ll~~g~~~~ 115 (152)
+|+|+..++.+++++|+..|++.+
T Consensus 130 L~~A~~~~~~~i~~~Ll~~ga~~~ 153 (154)
T PHA02736 130 YYVACERHDAKMMNILRAKGAQCK 153 (154)
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCC
Confidence 999999999999999999987753
No 71
>KOG4214|consensus
Probab=99.68 E-value=4.7e-16 Score=85.24 Aligned_cols=92 Identities=27% Similarity=0.353 Sum_probs=83.2
Q ss_pred cHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHH
Q psy3338 56 TALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAASAANEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEK 135 (152)
Q Consensus 56 ~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~ 135 (152)
-.+.++.++|..+-++..+..|.+++.. .++++|+|+|+-+|+.+++++|+..|++++.+|++|-|||-.|+..|+.+
T Consensus 4 ~~~~W~vkNG~~DeVk~~v~~g~nVn~~--~ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKygITPLLsAvwEGH~~ 81 (117)
T KOG4214|consen 4 MSVAWNVKNGEIDEVKQSVNEGLNVNEI--YGGRTPLHYAADYGQLSILEFLISIGANIQDKDKYGITPLLSAVWEGHRD 81 (117)
T ss_pred hhHhhhhccCcHHHHHHHHHccccHHHH--hCCcccchHhhhcchHHHHHHHHHhccccCCccccCCcHHHHHHHHhhHH
Confidence 3578899999999999999888766543 35589999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCcccc
Q psy3338 136 ISQILLERFSDLQT 149 (152)
Q Consensus 136 i~~~L~~~~~~~~~ 149 (152)
++++|++.|++...
T Consensus 82 cVklLL~~GAdrt~ 95 (117)
T KOG4214|consen 82 CVKLLLQNGADRTI 95 (117)
T ss_pred HHHHHHHcCcccce
Confidence 99999999998763
No 72
>KOG0507|consensus
Probab=99.67 E-value=1.2e-16 Score=115.66 Aligned_cols=127 Identities=26% Similarity=0.288 Sum_probs=116.3
Q ss_pred ccccCCCChhHHHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHH
Q psy3338 15 CKPILPEHIPLTIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLH 93 (152)
Q Consensus 15 ~~~~~~~~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~ 93 (152)
+.+...+.|.++| |+.+|+.. ++.|++...-++..|..|.+|||+|+..|+.++++.++..+..++.....+ .+|+|
T Consensus 43 n~qd~~gfTalhh-a~Lng~~~is~llle~ea~ldl~d~kg~~plhlaaw~g~~e~vkmll~q~d~~na~~~e~-~tplh 120 (854)
T KOG0507|consen 43 NLQDYSGFTLLHH-AVLNGQNQISKLLLDYEALLDLCDTKGILPLHLAAWNGNLEIVKMLLLQTDILNAVNIEN-ETPLH 120 (854)
T ss_pred cccCccchhHHHH-HHhcCchHHHHHHhcchhhhhhhhccCcceEEehhhcCcchHHHHHHhcccCCCcccccC-cCccc
Confidence 3444467787755 78899999 999999999999999999999999999999999999999998888888777 89999
Q ss_pred HHHHcCCHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHh
Q psy3338 94 RAASAANEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKISQILLER 143 (152)
Q Consensus 94 ~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~ 143 (152)
.++++|+.+++.+|+.+|++...++..+.|++.+|++.|..+++..|++.
T Consensus 121 laaqhgh~dvv~~Ll~~~adp~i~nns~~t~ldlA~qfgr~~Vvq~ll~~ 170 (854)
T KOG0507|consen 121 LAAQHGHLEVVFYLLKKNADPFIRNNSKETVLDLASRFGRAEVVQMLLQK 170 (854)
T ss_pred hhhhhcchHHHHHHHhcCCCccccCcccccHHHHHHHhhhhHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999999987
No 73
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.66 E-value=3.5e-16 Score=116.22 Aligned_cols=101 Identities=27% Similarity=0.328 Sum_probs=78.3
Q ss_pred HHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHHHcCCHHHH
Q psy3338 26 TIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAASAANEEIV 104 (152)
Q Consensus 26 ~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~ 104 (152)
++.|+..|+.+ ++.|++.|++++.+|..|.||||+|+..|+.+++++|+++|++++..+..+ +||||+|+..++.+++
T Consensus 86 L~~aa~~G~~~~vk~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G-~TpLh~A~~~g~~~iv 164 (664)
T PTZ00322 86 LCQLAASGDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDG-KTPLELAEENGFREVV 164 (664)
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCC-CCHHHHHHHCCcHHHH
Confidence 35567778888 888888888888888888888888888888888888888888888777777 7888888888888888
Q ss_pred HHHHhc-------CCCCCccCCCCCcHHHH
Q psy3338 105 TLLLDN-------GADSTLKDSDGLTALDR 127 (152)
Q Consensus 105 ~~Ll~~-------g~~~~~~~~~~~~~l~~ 127 (152)
++|+.+ |++.+..+..|.+|+..
T Consensus 165 ~~Ll~~~~~~~~~ga~~~~~~~~g~~~~~~ 194 (664)
T PTZ00322 165 QLLSRHSQCHFELGANAKPDSFTGKPPSLE 194 (664)
T ss_pred HHHHhCCCcccccCCCCCccccCCCCccch
Confidence 888877 66666666666655543
No 74
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.63 E-value=4.8e-16 Score=79.86 Aligned_cols=55 Identities=42% Similarity=0.568 Sum_probs=27.2
Q ss_pred cCCCC-CCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHH
Q psy3338 40 LPICS-VDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRA 95 (152)
Q Consensus 40 Ll~~~-~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a 95 (152)
|+++| .+++.+|..|.||||+|+..|+.+++++|++.|++++.++..+ +||+++|
T Consensus 1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G-~Tpl~~A 56 (56)
T PF13857_consen 1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDG-QTPLHYA 56 (56)
T ss_dssp -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS---HHHH-
T ss_pred CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCC-CCHHHhC
Confidence 45555 6777777788888888888888888888887788888777777 7888775
No 75
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.63 E-value=4.5e-15 Score=110.37 Aligned_cols=87 Identities=32% Similarity=0.454 Sum_probs=83.5
Q ss_pred cHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHH
Q psy3338 56 TALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAASAANEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEK 135 (152)
Q Consensus 56 ~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~ 135 (152)
..|+.|+..|+.+.++.|+..|++++..+..+ +||||+|+..|+.+++++|++.|++++.++..|.|||++|+..++.+
T Consensus 84 ~~L~~aa~~G~~~~vk~LL~~Gadin~~d~~G-~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~ 162 (664)
T PTZ00322 84 VELCQLAASGDAVGARILLTGGADPNCRDYDG-RTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFRE 162 (664)
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCC-CcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHH
Confidence 35888999999999999999999999998888 89999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHh
Q psy3338 136 ISQILLER 143 (152)
Q Consensus 136 i~~~L~~~ 143 (152)
++++|+++
T Consensus 163 iv~~Ll~~ 170 (664)
T PTZ00322 163 VVQLLSRH 170 (664)
T ss_pred HHHHHHhC
Confidence 99999998
No 76
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.61 E-value=4.1e-15 Score=75.94 Aligned_cols=53 Identities=47% Similarity=0.640 Sum_probs=27.2
Q ss_pred cCHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHH
Q psy3338 89 ATPLHRAASAANEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKISQILL 141 (152)
Q Consensus 89 ~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~ 141 (152)
+||+|+|+..|+.+++++|++.|.+++..|.+|.||+|+|+..|+.+++++|+
T Consensus 2 ~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 2 RTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred ChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 45555555555555555555555555555555555555555555555555553
No 77
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.60 E-value=5.8e-15 Score=75.36 Aligned_cols=54 Identities=52% Similarity=0.730 Sum_probs=45.2
Q ss_pred CccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHHHcCCHHHHHHHH
Q psy3338 54 GYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAASAANEEIVTLLL 108 (152)
Q Consensus 54 g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll 108 (152)
|.||||+|++.|+.+++++|++.|.+++..+..+ +||+|+|+..|+.+++++|+
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g-~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDEDG-RTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS---HHHHHHHTT-HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCC-CCHHHHHHHccCHHHHHHHC
Confidence 6799999999999999999999999999998887 89999999999999999885
No 78
>KOG1710|consensus
Probab=99.59 E-value=4.6e-15 Score=97.17 Aligned_cols=122 Identities=29% Similarity=0.291 Sum_probs=105.4
Q ss_pred CChhHHHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHHHcC
Q psy3338 21 EHIPLTIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAASAA 99 (152)
Q Consensus 21 ~~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~~~ 99 (152)
...|+ ..++..|+.+ ...|+.---+++.+|..|+++|..|+..|+.++++.|++.|+|+|......+.|||+.|+..|
T Consensus 12 ~~~~L-le~i~Kndt~~a~~LLs~vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALSG 90 (396)
T KOG1710|consen 12 PKSPL-LEAIDKNDTEAALALLSTVRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALSG 90 (396)
T ss_pred hhhHH-HHHHccCcHHHHHHHHHHhhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHcC
Confidence 44455 4566777777 777776655689999999999999999999999999999999998665555589999999999
Q ss_pred CHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHh
Q psy3338 100 NEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKISQILLER 143 (152)
Q Consensus 100 ~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~ 143 (152)
+.++..+|++.|+.....|.-|+|+-.+|+.-|+.+++..+-++
T Consensus 91 n~dvcrllldaGa~~~~vNsvgrTAaqmAAFVG~H~CV~iINN~ 134 (396)
T KOG1710|consen 91 NQDVCRLLLDAGARMYLVNSVGRTAAQMAAFVGHHECVAIINNH 134 (396)
T ss_pred CchHHHHHHhccCccccccchhhhHHHHHHHhcchHHHHHHhcc
Confidence 99999999999999999999999999999999999988766544
No 79
>KOG0505|consensus
Probab=99.58 E-value=5.9e-15 Score=103.27 Aligned_cols=128 Identities=30% Similarity=0.376 Sum_probs=113.1
Q ss_pred CChhHHHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHHHcC
Q psy3338 21 EHIPLTIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAASAA 99 (152)
Q Consensus 21 ~~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~~~ 99 (152)
.....+..|+..|+++ +..|+..|++++..+..|.|+||.+|...+.+++++|+++|++++..+..+ |||+|.|+.-|
T Consensus 39 ~~sa~~l~A~~~~d~~ev~~ll~~ga~~~~~n~DglTalhq~~id~~~e~v~~l~e~ga~Vn~~d~e~-wtPlhaaascg 117 (527)
T KOG0505|consen 39 EDSAVFLEACSRGDLEEVRKLLNRGASPNLCNVDGLTALHQACIDDNLEMVKFLVENGANVNAQDNEG-WTPLHAAASCG 117 (527)
T ss_pred CchHHHHhccccccHHHHHHHhccCCCccccCCccchhHHHHHhcccHHHHHHHHHhcCCcccccccc-CCcchhhcccc
Confidence 3445567889999999 999999999999999999999999999999999999999999999999988 99999999999
Q ss_pred CHHHHHHHHhcCCCCCccC-----------------------------------------------------------CC
Q psy3338 100 NEEIVTLLLDNGADSTLKD-----------------------------------------------------------SD 120 (152)
Q Consensus 100 ~~~~~~~Ll~~g~~~~~~~-----------------------------------------------------------~~ 120 (152)
+..++.+|+..|+++...| ..
T Consensus 118 ~~~i~~~li~~gA~~~avNsdg~~P~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~~G~~~d~~~~r 197 (527)
T KOG0505|consen 118 YLNIVEYLIQHGANLLAVNSDGNMPYDLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLNAGAELDARHAR 197 (527)
T ss_pred cHHHHHHHHHhhhhhhhccCCCCCccccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHhccccccccccc
Confidence 9999999999887743222 34
Q ss_pred CCcHHHHHHhcCcHHHHHHHHHhCCcccc
Q psy3338 121 GLTALDRSRKESHEKISQILLERFSDLQT 149 (152)
Q Consensus 121 ~~~~l~~a~~~~~~~i~~~L~~~~~~~~~ 149 (152)
|.|.+|.|...|+.++..+|+++|.+++.
T Consensus 198 G~T~lHvAaa~Gy~e~~~lLl~ag~~~~~ 226 (527)
T KOG0505|consen 198 GATALHVAAANGYTEVAALLLQAGYSVNI 226 (527)
T ss_pred cchHHHHHHhhhHHHHHHHHHHhccCccc
Confidence 78999999999999999999999888764
No 80
>KOG0515|consensus
Probab=99.57 E-value=4.3e-15 Score=104.19 Aligned_cols=117 Identities=34% Similarity=0.396 Sum_probs=98.6
Q ss_pred HHHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHHHcCCHHH
Q psy3338 25 LTIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAASAANEEI 103 (152)
Q Consensus 25 ~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~ 103 (152)
++.=|+..|.+| |.-++..-.|+...+..|.|+||-|+..|+.+||+||+++|+++|..|..| |||||+|+.-++..+
T Consensus 553 LLLDaaLeGEldlVq~~i~ev~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdG-WTPLHCAASCNnv~~ 631 (752)
T KOG0515|consen 553 LLLDAALEGELDLVQRIIYEVTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNAADSDG-WTPLHCAASCNNVPM 631 (752)
T ss_pred HHHhhhhcchHHHHHHHHHhhcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCC-CchhhhhhhcCchHH
Confidence 455678888888 888887777888888899999999999999999999999999999999888 999999999999999
Q ss_pred HHHHHhcCCCCCccC-CCCCcHHHHHHh--cCcHHHHHHHHH
Q psy3338 104 VTLLLDNGADSTLKD-SDGLTALDRSRK--ESHEKISQILLE 142 (152)
Q Consensus 104 ~~~Ll~~g~~~~~~~-~~~~~~l~~a~~--~~~~~i~~~L~~ 142 (152)
++.|++.|+.+-... .++.|+...|-. .|+.++.+||..
T Consensus 632 ckqLVe~GaavfAsTlSDmeTa~eKCee~eeGY~~CsqyL~~ 673 (752)
T KOG0515|consen 632 CKQLVESGAAVFASTLSDMETAAEKCEEMEEGYDQCSQYLYG 673 (752)
T ss_pred HHHHHhccceEEeeecccccchhhhcchhhhhHHHHHHHHHH
Confidence 999999987664433 477888876543 667888888863
No 81
>KOG0507|consensus
Probab=99.57 E-value=3.6e-15 Score=108.17 Aligned_cols=121 Identities=28% Similarity=0.296 Sum_probs=106.8
Q ss_pred HHHHHcCCCC-CCCcCCC-------------CCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHH
Q psy3338 27 IILLTTGRYP-PGHLPIC-------------SVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPL 92 (152)
Q Consensus 27 ~~a~~~g~~~-v~~Ll~~-------------~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l 92 (152)
.-|++.|+++ +..|++. ..+.+..|..|.|+||.|+.+|+.++++.|+++.+.++..+..+ ..|+
T Consensus 8 ~~a~ka~d~~tva~ll~~~~~r~~~l~~~trsds~n~qd~~gfTalhha~Lng~~~is~llle~ea~ldl~d~kg-~~pl 86 (854)
T KOG0507|consen 8 IDACKAGDYDTVALLLSSKKGRSGLLFFTTRSDSHNLQDYSGFTLLHHAVLNGQNQISKLLLDYEALLDLCDTKG-ILPL 86 (854)
T ss_pred HHhhhcccHHHHHHhccCCCCCCCCCCCCCCCccccccCccchhHHHHHHhcCchHHHHHHhcchhhhhhhhccC-cceE
Confidence 3466777777 6666543 23567788899999999999999999999999999999888777 8999
Q ss_pred HHHHHcCCHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHhCCccc
Q psy3338 93 HRAASAANEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKISQILLERFSDLQ 148 (152)
Q Consensus 93 ~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~~~~ 148 (152)
|+|+..|+.+++++++..+..++..+..|.+|||.++.+++.+++.+|+++|++..
T Consensus 87 hlaaw~g~~e~vkmll~q~d~~na~~~e~~tplhlaaqhgh~dvv~~Ll~~~adp~ 142 (854)
T KOG0507|consen 87 HLAAWNGNLEIVKMLLLQTDILNAVNIENETPLHLAAQHGHLEVVFYLLKKNADPF 142 (854)
T ss_pred EehhhcCcchHHHHHHhcccCCCcccccCcCccchhhhhcchHHHHHHHhcCCCcc
Confidence 99999999999999999998899999999999999999999999999999998864
No 82
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.57 E-value=5.5e-15 Score=75.90 Aligned_cols=55 Identities=51% Similarity=0.732 Sum_probs=32.9
Q ss_pred HHhcC-CCCCccccCCCcCHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCcHHHHH
Q psy3338 73 LISRG-ANVNAVTRAGQATPLHRAASAANEEIVTLLLDNGADSTLKDSDGLTALDRS 128 (152)
Q Consensus 73 L~~~~-~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a 128 (152)
|++++ .+++..+..+ .||||+|+..|+.+++++|+..|++++.+|.+|+||+++|
T Consensus 1 LL~~~~~~~n~~d~~G-~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 1 LLEHGPADVNAQDKYG-NTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA 56 (56)
T ss_dssp -----T--TT---TTS---HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred CCccCcCCCcCcCCCC-CcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence 45666 7888888888 8999999999999999999999999999999999999986
No 83
>KOG0515|consensus
Probab=99.48 E-value=2e-13 Score=96.01 Aligned_cols=89 Identities=26% Similarity=0.280 Sum_probs=82.8
Q ss_pred HHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHH
Q psy3338 59 HYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAASAANEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKISQ 138 (152)
Q Consensus 59 ~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~ 138 (152)
.-|+.-|-+++|+..+..-.|+...+..| .|+||-|+-.|+.+++++|+++|+++|..|.+||||||+|+..++..|.+
T Consensus 555 LDaaLeGEldlVq~~i~ev~DpSqpNdEG-ITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCNnv~~ck 633 (752)
T KOG0515|consen 555 LDAALEGELDLVQRIIYEVTDPSQPNDEG-ITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCNNVPMCK 633 (752)
T ss_pred HhhhhcchHHHHHHHHHhhcCCCCCCccc-hhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcCchHHHH
Confidence 44788899999999998888888888777 99999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCccc
Q psy3338 139 ILLERFSDLQ 148 (152)
Q Consensus 139 ~L~~~~~~~~ 148 (152)
.|++.|+-+-
T Consensus 634 qLVe~Gaavf 643 (752)
T KOG0515|consen 634 QLVESGAAVF 643 (752)
T ss_pred HHHhccceEE
Confidence 9999998764
No 84
>KOG4369|consensus
Probab=99.46 E-value=1.2e-14 Score=109.64 Aligned_cols=128 Identities=23% Similarity=0.276 Sum_probs=115.5
Q ss_pred ChhHHHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHHHcCC
Q psy3338 22 HIPLTIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAASAAN 100 (152)
Q Consensus 22 ~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~~~~ 100 (152)
.+++ ..|+.+|+.| ++.|+..|+++..+|..|.+||..|+..|+..+|+-|+.+.+++.......+.|+|.+||..|+
T Consensus 758 ~t~L-T~acaggh~e~vellv~rganiehrdkkgf~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~lSlacsggr 836 (2131)
T KOG4369|consen 758 KTNL-TSACAGGHREEVELLVVRGANIEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLSLACSGGR 836 (2131)
T ss_pred cccc-cccccCccHHHHHHHHHhcccccccccccchhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceEEEecCCCc
Confidence 3444 5688999999 9999999999999999999999999999999999999999999886655555899999999999
Q ss_pred HHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHhCCccccc
Q psy3338 101 EEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKISQILLERFSDLQTN 150 (152)
Q Consensus 101 ~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~~~~~~ 150 (152)
++++++|+..|++...++-...||+.+|..-|+.++++.|+.+|.+++..
T Consensus 837 ~~vvelLl~~gankehrnvsDytPlsla~Sggy~~iI~~llS~GseInSr 886 (2131)
T KOG4369|consen 837 TRVVELLLNAGANKEHRNVSDYTPLSLARSGGYTKIIHALLSSGSEINSR 886 (2131)
T ss_pred chHHHHHHHhhccccccchhhcCchhhhcCcchHHHHHHHhhcccccccc
Confidence 99999999999999999999999999999999999999999999888754
No 85
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.46 E-value=2.2e-12 Score=84.05 Aligned_cols=101 Identities=39% Similarity=0.504 Sum_probs=91.9
Q ss_pred CCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHHHcCC-----HHHHHHHHhcCC---CCCccCC
Q psy3338 48 NIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAASAAN-----EEIVTLLLDNGA---DSTLKDS 119 (152)
Q Consensus 48 ~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~~~~-----~~~~~~Ll~~g~---~~~~~~~ 119 (152)
...+..+.++++.++..+..+++.+++..+.+++..+..+ .||+|+|+..++ .++++.|++.|. ..+..+.
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g-~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~ 145 (235)
T COG0666 67 AARDLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADG-DTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDE 145 (235)
T ss_pred ccCCccccCHHHHHHHcCcHHHHHHHHHcCCCcccccCCC-CcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCC
Confidence 3445568899999999999999999999999998888888 899999999999 999999999999 6666799
Q ss_pred CCCcHHHHHHhcCcHHHHHHHHHhCCcccc
Q psy3338 120 DGLTALDRSRKESHEKISQILLERFSDLQT 149 (152)
Q Consensus 120 ~~~~~l~~a~~~~~~~i~~~L~~~~~~~~~ 149 (152)
.|.||+++|+..|..+++..|++.|++++.
T Consensus 146 ~g~tpl~~A~~~~~~~~~~~ll~~~~~~~~ 175 (235)
T COG0666 146 DGNTPLHWAALNGDADIVELLLEAGADPNS 175 (235)
T ss_pred CCCchhHHHHHcCchHHHHHHHhcCCCCcc
Confidence 999999999999999999999999998764
No 86
>KOG3676|consensus
Probab=99.36 E-value=4.6e-12 Score=92.96 Aligned_cols=126 Identities=29% Similarity=0.291 Sum_probs=98.8
Q ss_pred CChhHHHHHH--HcCCCC-CCCcCCCC----CCCCCCC-CCCccHHHHHHHcCCHHHHHHHHhcCCCCCccc--------
Q psy3338 21 EHIPLTIILL--TTGRYP-PGHLPICS----VDPNIPD-NAGYTALHYAARSNNKPICLLLISRGANVNAVT-------- 84 (152)
Q Consensus 21 ~~~~~~~~a~--~~g~~~-v~~Ll~~~----~~~~~~~-~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~-------- 84 (152)
|.|-+|.++. ..++-+ ++.|++.- .|+...+ ..|.||||.|+.+.+.++|++|+..|+|++.+.
T Consensus 143 GET~Lh~~lL~~~~~~n~la~~LL~~~p~lind~~~~eeY~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~G~FF~~~ 222 (782)
T KOG3676|consen 143 GETLLHKALLNLSDGHNELARVLLEIFPKLINDIYTSEEYYGQSALHIAIVNRDAELVRLLLAAGADVHARACGAFFCPD 222 (782)
T ss_pred hhhHHHHHHhcCchhHHHHHHHHHHHhHHHhhhhhhhHhhcCcchHHHHHHhccHHHHHHHHHcCCchhhHhhccccCcc
Confidence 4455544333 333334 55555431 2333333 369999999999999999999999999877522
Q ss_pred -c-------------CCCcCHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHhCCc
Q psy3338 85 -R-------------AGQATPLHRAASAANEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKISQILLERFSD 146 (152)
Q Consensus 85 -~-------------~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~~ 146 (152)
. ..|..||..|+-.++++++++|+++|+|++.+|..|+|.||+.+.+-..+|.++++++|++
T Consensus 223 dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~gAd~~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~ 298 (782)
T KOG3676|consen 223 DQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLAHGADPNAQDSNGNTVLHMLVIHFVTEMYDLALELGAN 298 (782)
T ss_pred cccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHhcCCCCCccccCCChHHHHHHHHHHHHHHHHHHhcCCC
Confidence 1 1136899999999999999999999999999999999999999999899999999999998
No 87
>KOG0818|consensus
Probab=99.32 E-value=7.5e-12 Score=87.55 Aligned_cols=93 Identities=35% Similarity=0.468 Sum_probs=85.3
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHH
Q psy3338 57 ALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAASAANEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKI 136 (152)
Q Consensus 57 ~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i 136 (152)
-||.+++.|+.+++-.|+.-|+++|..+...|.||||.|++.|+..-+++|+-+|+++...|..|.||+.+|...|+.++
T Consensus 136 QLhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~~GmtP~~~AR~~gH~~l 215 (669)
T KOG0818|consen 136 QLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQDSSGMTPVDYARQGGHHEL 215 (669)
T ss_pred HHHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCCCCCCCcHHHHHHhcCchHH
Confidence 48999999999999999999999999888877999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCcccc
Q psy3338 137 SQILLERFSDLQT 149 (152)
Q Consensus 137 ~~~L~~~~~~~~~ 149 (152)
.+.|++..-++.+
T Consensus 216 aeRl~e~~y~vtD 228 (669)
T KOG0818|consen 216 AERLVEIQYELTD 228 (669)
T ss_pred HHHHHHHHHHHHH
Confidence 9988876554443
No 88
>KOG4369|consensus
Probab=99.30 E-value=8.7e-13 Score=99.91 Aligned_cols=141 Identities=23% Similarity=0.261 Sum_probs=119.9
Q ss_pred ccCCCCccccCCCChhHHHHHHHcCCCC-CCCcCCCCCCCCC-CCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccC
Q psy3338 9 WNDLPTCKPILPEHIPLTIILLTTGRYP-PGHLPICSVDPNI-PDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRA 86 (152)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~-~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~ 86 (152)
..+.........|.+|+++ |+..|+.. |+.|+++.++++. .|..+.|+|.+||-.|..++++.|+..|++-..++..
T Consensus 778 ~rganiehrdkkgf~plIm-aatagh~tvV~~llk~ha~veaQsdrtkdt~lSlacsggr~~vvelLl~~gankehrnvs 856 (2131)
T KOG4369|consen 778 VRGANIEHRDKKGFVPLIM-AATAGHITVVQDLLKAHADVEAQSDRTKDTMLSLACSGGRTRVVELLLNAGANKEHRNVS 856 (2131)
T ss_pred Hhcccccccccccchhhhh-hcccCchHHHHHHHhhhhhhhhhcccccCceEEEecCCCcchHHHHHHHhhccccccchh
Confidence 3334444456678888854 77889999 9999999988874 5567999999999999999999999999988777777
Q ss_pred CCcCHHHHHHHcCCHHHHHHHHhcCCCCCccC--CCCCcHHHHHHhcCcHHHHHHHHHhCCcccccc
Q psy3338 87 GQATPLHRAASAANEEIVTLLLDNGADSTLKD--SDGLTALDRSRKESHEKISQILLERFSDLQTNI 151 (152)
Q Consensus 87 ~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~--~~~~~~l~~a~~~~~~~i~~~L~~~~~~~~~~~ 151 (152)
. .||+.+|...|..+++..|+..|..++.+. +-|-.||.+|..+|+....+.|++.|.+++.+|
T Consensus 857 D-ytPlsla~Sggy~~iI~~llS~GseInSrtgSklgisPLmlatmngh~~at~~ll~~gsdiNaqI 922 (2131)
T KOG4369|consen 857 D-YTPLSLARSGGYTKIIHALLSSGSEINSRTGSKLGISPLMLATMNGHQAATLSLLQPGSDINAQI 922 (2131)
T ss_pred h-cCchhhhcCcchHHHHHHHhhcccccccccccccCcchhhhhhhccccHHHHHHhcccchhcccc
Confidence 7 899999999999999999999998877654 467899999999999999999999999998765
No 89
>KOG0783|consensus
Probab=99.20 E-value=1.1e-11 Score=91.62 Aligned_cols=84 Identities=33% Similarity=0.444 Sum_probs=80.1
Q ss_pred CCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCcHHH
Q psy3338 47 PNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAASAANEEIVTLLLDNGADSTLKDSDGLTALD 126 (152)
Q Consensus 47 ~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~ 126 (152)
.+++|..|.++||.++.-+..++++||+++|+++...|...|+||||-|+.+|+.+++..|+.+|..+..+|++|..||.
T Consensus 45 anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~SL~i~Dkeglsplq 124 (1267)
T KOG0783|consen 45 ANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKGRSLRIKDKEGLSPLQ 124 (1267)
T ss_pred hhHHHhhccceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhhhchHHHHHHHHhcCCceEEecccCCCHHH
Confidence 67899999999999999999999999999999999999888899999999999999999999999999999999999999
Q ss_pred HHHh
Q psy3338 127 RSRK 130 (152)
Q Consensus 127 ~a~~ 130 (152)
.-++
T Consensus 125 ~~~r 128 (1267)
T KOG0783|consen 125 FLSR 128 (1267)
T ss_pred HHhh
Confidence 8766
No 90
>KOG1710|consensus
Probab=99.18 E-value=2.1e-10 Score=75.63 Aligned_cols=94 Identities=27% Similarity=0.269 Sum_probs=84.4
Q ss_pred CccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHHHcCCHHHHHHHHhcCCCCCccC-CCCCcHHHHHHhcC
Q psy3338 54 GYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAASAANEEIVTLLLDNGADSTLKD-SDGLTALDRSRKES 132 (152)
Q Consensus 54 g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~-~~~~~~l~~a~~~~ 132 (152)
-..||..+...++.+....|++---.++..|..| .++|..|+..|+.+++++|++.|+++|... ..+.|||+.|+-.|
T Consensus 12 ~~~~Lle~i~Kndt~~a~~LLs~vr~vn~~D~sG-Ms~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALSG 90 (396)
T KOG1710|consen 12 PKSPLLEAIDKNDTEAALALLSTVRQVNQRDPSG-MSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALSG 90 (396)
T ss_pred hhhHHHHHHccCcHHHHHHHHHHhhhhhccCCCc-ccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHcC
Confidence 4578999999999998888887766688899888 999999999999999999999999998754 47899999999999
Q ss_pred cHHHHHHHHHhCCccc
Q psy3338 133 HEKISQILLERFSDLQ 148 (152)
Q Consensus 133 ~~~i~~~L~~~~~~~~ 148 (152)
+.++...|++.|+...
T Consensus 91 n~dvcrllldaGa~~~ 106 (396)
T KOG1710|consen 91 NQDVCRLLLDAGARMY 106 (396)
T ss_pred CchHHHHHHhccCccc
Confidence 9999999999998764
No 91
>KOG0506|consensus
Probab=99.16 E-value=8e-11 Score=82.15 Aligned_cols=93 Identities=26% Similarity=0.328 Sum_probs=84.1
Q ss_pred CCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHHHcCCHHHHHHHHh-cCCCCCccCCCCCcHHHHHHh
Q psy3338 52 NAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAASAANEEIVTLLLD-NGADSTLKDSDGLTALDRSRK 130 (152)
Q Consensus 52 ~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~-~g~~~~~~~~~~~~~l~~a~~ 130 (152)
..+...+.+|++.|+...++.+.-.|.++..+|... +|+||.|+-.|+.+++++|++ .+.+.+.+|++|+|||.-|..
T Consensus 504 ~~~~i~~~~aa~~GD~~alrRf~l~g~D~~~~DyD~-RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~~ 582 (622)
T KOG0506|consen 504 NDTVINVMYAAKNGDLSALRRFALQGMDLETKDYDD-RTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAKH 582 (622)
T ss_pred ccchhhhhhhhhcCCHHHHHHHHHhccccccccccc-chhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhHh
Confidence 345678999999999999999888899999998888 899999999999999999996 478899999999999999999
Q ss_pred cCcHHHHHHHHHhCC
Q psy3338 131 ESHEKISQILLERFS 145 (152)
Q Consensus 131 ~~~~~i~~~L~~~~~ 145 (152)
.++.+++++|.+...
T Consensus 583 F~h~~v~k~L~~~~~ 597 (622)
T KOG0506|consen 583 FKHKEVVKLLEEAQY 597 (622)
T ss_pred cCcHHHHHHHHHHhc
Confidence 999999999988754
No 92
>PF13606 Ank_3: Ankyrin repeat
Probab=99.07 E-value=3e-10 Score=50.36 Aligned_cols=28 Identities=46% Similarity=0.631 Sum_probs=18.8
Q ss_pred CccHHHHHHHcCCHHHHHHHHhcCCCCC
Q psy3338 54 GYTALHYAARSNNKPICLLLISRGANVN 81 (152)
Q Consensus 54 g~~~L~~a~~~g~~~~~~~L~~~~~~~~ 81 (152)
|+||||+||..|+.+++++|+++|++++
T Consensus 2 G~T~Lh~A~~~g~~e~v~~Ll~~gadvn 29 (30)
T PF13606_consen 2 GNTPLHLAASNGNIEIVKYLLEHGADVN 29 (30)
T ss_pred CCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence 5666777776666666776666666654
No 93
>KOG0506|consensus
Probab=99.05 E-value=7.6e-11 Score=82.27 Aligned_cols=86 Identities=23% Similarity=0.295 Sum_probs=78.8
Q ss_pred HHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHh-cCCCCCccccCCCcCHHHHHHHcCCHHH
Q psy3338 26 TIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLIS-RGANVNAVTRAGQATPLHRAASAANEEI 103 (152)
Q Consensus 26 ~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~-~~~~~~~~~~~~~~~~l~~a~~~~~~~~ 103 (152)
+++|++.|+++ ++-+.-.|.|++.+|....|+||.|+.-|+.+++++|+. .+.+++.+|+++ +|||.-|..+++.++
T Consensus 510 ~~~aa~~GD~~alrRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~-rtPlDdA~~F~h~~v 588 (622)
T KOG0506|consen 510 VMYAAKNGDLSALRRFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWG-RTPLDDAKHFKHKEV 588 (622)
T ss_pred hhhhhhcCCHHHHHHHHHhcccccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccC-CCcchHhHhcCcHHH
Confidence 47799999999 888888899999999999999999999999999999996 578889999999 899999999999999
Q ss_pred HHHHHhcCC
Q psy3338 104 VTLLLDNGA 112 (152)
Q Consensus 104 ~~~Ll~~g~ 112 (152)
+++|-+...
T Consensus 589 ~k~L~~~~~ 597 (622)
T KOG0506|consen 589 VKLLEEAQY 597 (622)
T ss_pred HHHHHHHhc
Confidence 999987644
No 94
>PF13606 Ank_3: Ankyrin repeat
Probab=99.02 E-value=4.8e-10 Score=49.69 Aligned_cols=28 Identities=29% Similarity=0.350 Sum_probs=15.4
Q ss_pred CCcHHHHHHhcCcHHHHHHHHHhCCccc
Q psy3338 121 GLTALDRSRKESHEKISQILLERFSDLQ 148 (152)
Q Consensus 121 ~~~~l~~a~~~~~~~i~~~L~~~~~~~~ 148 (152)
|+||||+|+..|+.+++++|+++|++++
T Consensus 2 G~T~Lh~A~~~g~~e~v~~Ll~~gadvn 29 (30)
T PF13606_consen 2 GNTPLHLAASNGNIEIVKYLLEHGADVN 29 (30)
T ss_pred CCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence 4555555555555555555555555543
No 95
>KOG0782|consensus
Probab=99.02 E-value=6.3e-10 Score=79.61 Aligned_cols=116 Identities=24% Similarity=0.362 Sum_probs=100.8
Q ss_pred HHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCC--CCccccCCCcCHHHHHHHcCCHHH
Q psy3338 27 IILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGAN--VNAVTRAGQATPLHRAASAANEEI 103 (152)
Q Consensus 27 ~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~--~~~~~~~~~~~~l~~a~~~~~~~~ 103 (152)
..|+..+++- +......|.++..++..-.+.||+|+..|+-++++|++++|.. ++..+..+ .|+||.|+-.++..+
T Consensus 871 l~av~~~D~~klqE~h~~gg~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~g-et~lhkaa~~~~r~v 949 (1004)
T KOG0782|consen 871 LRAVLSSDLMKLQETHLNGGSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETG-ETALHKAACQRNRAV 949 (1004)
T ss_pred HHHHHhccHHHHHHHHhcCCceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhh-hHHHHHHHHhcchHH
Confidence 4456666655 6666677888888888889999999999999999999999864 45566666 899999999999999
Q ss_pred HHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHh
Q psy3338 104 VTLLLDNGADSTLKDSDGLTALDRSRKESHEKISQILLER 143 (152)
Q Consensus 104 ~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~ 143 (152)
+++|++.|+.+-..|..|.||-.-|.+.+..++.-||.++
T Consensus 950 c~~lvdagasl~ktd~kg~tp~eraqqa~d~dlaayle~r 989 (1004)
T KOG0782|consen 950 CQLLVDAGASLRKTDSKGKTPQERAQQAGDPDLAAYLESR 989 (1004)
T ss_pred HHHHHhcchhheecccCCCChHHHHHhcCCchHHHHHhhh
Confidence 9999999999999999999999999999999999999865
No 96
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.99 E-value=1.4e-09 Score=49.44 Aligned_cols=31 Identities=45% Similarity=0.689 Sum_probs=19.2
Q ss_pred CccHHHHHHHcCCHHHHHHHHhcCCCCCccc
Q psy3338 54 GYTALHYAARSNNKPICLLLISRGANVNAVT 84 (152)
Q Consensus 54 g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~ 84 (152)
|.||||+|+..|+.+++++|+++|++++.++
T Consensus 2 G~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d 32 (33)
T PF00023_consen 2 GNTPLHYAAQRGHPDIVKLLLKHGADINARD 32 (33)
T ss_dssp SBBHHHHHHHTTCHHHHHHHHHTTSCTTCBC
T ss_pred cccHHHHHHHHHHHHHHHHHHHCcCCCCCCC
Confidence 5566666666666666666666666665443
No 97
>KOG0818|consensus
Probab=98.94 E-value=1.5e-09 Score=76.33 Aligned_cols=85 Identities=25% Similarity=0.236 Sum_probs=75.8
Q ss_pred HHHHHHHcCCCC-CCCcCCCCCCCCCCCC-CCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHHHcCCHH
Q psy3338 25 LTIILLTTGRYP-PGHLPICSVDPNIPDN-AGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAASAANEE 102 (152)
Q Consensus 25 ~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~-~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~~~~~~ 102 (152)
-+|..++.|+.+ .--|+..|+++|+.+. .|.||||.|++.|+.--+++|+-+|+|++..+..| .||+.+|-..|+.+
T Consensus 136 QLhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~~G-mtP~~~AR~~gH~~ 214 (669)
T KOG0818|consen 136 QLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQDSSG-MTPVDYARQGGHHE 214 (669)
T ss_pred HHHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCCCCCC-CcHHHHHHhcCchH
Confidence 468889999999 7778889999998885 59999999999999999999999999999999988 99999999999988
Q ss_pred HHHHHHhc
Q psy3338 103 IVTLLLDN 110 (152)
Q Consensus 103 ~~~~Ll~~ 110 (152)
+.+.|++.
T Consensus 215 laeRl~e~ 222 (669)
T KOG0818|consen 215 LAERLVEI 222 (669)
T ss_pred HHHHHHHH
Confidence 87766543
No 98
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.83 E-value=1.1e-08 Score=46.41 Aligned_cols=30 Identities=50% Similarity=0.734 Sum_probs=24.2
Q ss_pred cCHHHHHHHcCCHHHHHHHHhcCCCCCccC
Q psy3338 89 ATPLHRAASAANEEIVTLLLDNGADSTLKD 118 (152)
Q Consensus 89 ~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~ 118 (152)
+||||+|+..++.+++++|++.|++++.++
T Consensus 3 ~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d 32 (33)
T PF00023_consen 3 NTPLHYAAQRGHPDIVKLLLKHGADINARD 32 (33)
T ss_dssp BBHHHHHHHTTCHHHHHHHHHTTSCTTCBC
T ss_pred ccHHHHHHHHHHHHHHHHHHHCcCCCCCCC
Confidence 788888888888888888888888877655
No 99
>KOG0705|consensus
Probab=98.83 E-value=2.3e-08 Score=71.76 Aligned_cols=90 Identities=26% Similarity=0.304 Sum_probs=66.1
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCC---ccccCCCcCHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcH
Q psy3338 58 LHYAARSNNKPICLLLISRGANVN---AVTRAGQATPLHRAASAANEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHE 134 (152)
Q Consensus 58 L~~a~~~g~~~~~~~L~~~~~~~~---~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~ 134 (152)
|.-|....+...+-.|+.+|.... .....++.|+||+|+..|+..+.++|+=+|+++..+|..|.|+|.||...|..
T Consensus 628 Ll~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~l~yar~a~sq 707 (749)
T KOG0705|consen 628 LLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMARDAHGRTALFYARQAGSQ 707 (749)
T ss_pred HHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccceecccCCchhhhhHhhcccH
Confidence 344555556666667777764322 12222337888888888888888888888888888888888888888888888
Q ss_pred HHHHHHHHhCCcc
Q psy3338 135 KISQILLERFSDL 147 (152)
Q Consensus 135 ~i~~~L~~~~~~~ 147 (152)
+++++|+++|+..
T Consensus 708 ec~d~llq~gcp~ 720 (749)
T KOG0705|consen 708 ECIDVLLQYGCPD 720 (749)
T ss_pred HHHHHHHHcCCCc
Confidence 8888888888653
No 100
>KOG0705|consensus
Probab=98.82 E-value=5.3e-09 Score=74.87 Aligned_cols=86 Identities=29% Similarity=0.307 Sum_probs=70.5
Q ss_pred HHHHcCCCC-CCCcCCCCCC----CCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHHHcCCHH
Q psy3338 28 ILLTTGRYP-PGHLPICSVD----PNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAASAANEE 102 (152)
Q Consensus 28 ~a~~~g~~~-v~~Ll~~~~~----~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~~~~~~ 102 (152)
.|+...++. +..|+.+|.. -...+..|.|+||+||+.|+..+.++|+++|+|+..+|..+ +|+|.||-+.|..+
T Consensus 630 ~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rda~g-~t~l~yar~a~sqe 708 (749)
T KOG0705|consen 630 RAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMARDAHG-RTALFYARQAGSQE 708 (749)
T ss_pred HHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccceecccCC-chhhhhHhhcccHH
Confidence 344444444 6667776643 22344568999999999999999999999999999999998 89999999999999
Q ss_pred HHHHHHhcCCCC
Q psy3338 103 IVTLLLDNGADS 114 (152)
Q Consensus 103 ~~~~Ll~~g~~~ 114 (152)
++..|+.+|+..
T Consensus 709 c~d~llq~gcp~ 720 (749)
T KOG0705|consen 709 CIDVLLQYGCPD 720 (749)
T ss_pred HHHHHHHcCCCc
Confidence 999999998764
No 101
>KOG0522|consensus
Probab=98.77 E-value=2.3e-08 Score=70.96 Aligned_cols=85 Identities=31% Similarity=0.343 Sum_probs=67.2
Q ss_pred hHHHHHHHcCCCC-CCC-c-CCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHHHcCC
Q psy3338 24 PLTIILLTTGRYP-PGH-L-PICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAASAAN 100 (152)
Q Consensus 24 ~~~~~a~~~g~~~-v~~-L-l~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~~~~ 100 (152)
+.+|+++...+.+ +.. | .+....++.+|-.|.||||.|+..|+.+.++.|+..|+++..++..| |+|||-|+..|+
T Consensus 22 ~~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~g-Ws~L~EAv~~g~ 100 (560)
T KOG0522|consen 22 KPLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNEG-WSPLHEAVSTGN 100 (560)
T ss_pred cccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCcccccccc-ccHHHHHHHcCC
Confidence 3456666666666 333 2 23455678888889999999999999999999999999999888888 899999999999
Q ss_pred HHHHHHHHh
Q psy3338 101 EEIVTLLLD 109 (152)
Q Consensus 101 ~~~~~~Ll~ 109 (152)
.+++..++.
T Consensus 101 ~q~i~~vlr 109 (560)
T KOG0522|consen 101 EQIITEVLR 109 (560)
T ss_pred HHHHHHHHH
Confidence 887766653
No 102
>KOG0522|consensus
Probab=98.72 E-value=7.7e-08 Score=68.37 Aligned_cols=87 Identities=24% Similarity=0.374 Sum_probs=74.0
Q ss_pred cHHHHHHHcCCHHHHHHHH--hcCCCCCccccCCCcCHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCc
Q psy3338 56 TALHYAARSNNKPICLLLI--SRGANVNAVTRAGQATPLHRAASAANEEIVTLLLDNGADSTLKDSDGLTALDRSRKESH 133 (152)
Q Consensus 56 ~~L~~a~~~g~~~~~~~L~--~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~ 133 (152)
.|+|++......+-....+ +....++..|..+ +||||+|+..|+...+..|+..|+++..+|..|++||+-|+..|+
T Consensus 22 ~~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g-~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~~g~ 100 (560)
T KOG0522|consen 22 KPLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPG-RTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWSPLHEAVSTGN 100 (560)
T ss_pred cccchhhhccchhhHHHHHhhhhhceeccccCCC-CccHHHHHHhcCHHHHHHHHhcCCCccccccccccHHHHHHHcCC
Confidence 4588888887776555433 3345677788888 899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHh
Q psy3338 134 EKISQILLER 143 (152)
Q Consensus 134 ~~i~~~L~~~ 143 (152)
.+++..++.+
T Consensus 101 ~q~i~~vlr~ 110 (560)
T KOG0522|consen 101 EQIITEVLRH 110 (560)
T ss_pred HHHHHHHHHH
Confidence 9988887765
No 103
>KOG2384|consensus
Probab=98.70 E-value=8.6e-08 Score=59.85 Aligned_cols=69 Identities=25% Similarity=0.304 Sum_probs=61.7
Q ss_pred CCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcC-CCCCccccCCCcCHHHHHHHcCCHHHHHHHHhcCCC
Q psy3338 44 SVDPNIPDNAGYTALHYAARSNNKPICLLLISRG-ANVNAVTRAGQATPLHRAASAANEEIVTLLLDNGAD 113 (152)
Q Consensus 44 ~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~-~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~ 113 (152)
+.++|.+|..|+|+++.|+.-|+.+.+.||+.+| +.+...+..+ ...+.+|.+.|....+..|.+.-.+
T Consensus 2 e~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ss-ldaaqlaek~g~~~fvh~lfe~~~e 71 (223)
T KOG2384|consen 2 EGNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESS-LDAAQLAEKGGAQAFVHSLFENDRE 71 (223)
T ss_pred CCCccchhhhcchHHHHHhhhcchhHHHHHhccCccccccccccc-chHHHHHHhcChHHHHHHHHHHhcc
Confidence 4578999999999999999999999999999999 8888888888 8999999999999999999876433
No 104
>KOG0511|consensus
Probab=98.70 E-value=2.3e-08 Score=68.48 Aligned_cols=62 Identities=21% Similarity=0.142 Sum_probs=52.8
Q ss_pred HHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCC
Q psy3338 26 TIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAG 87 (152)
Q Consensus 26 ~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~ 87 (152)
++.|++.|+.+ |+.|++-|.++|..|.+..+||.+|+--|+.+++++|+++|+.++.....|
T Consensus 40 lceacR~GD~d~v~~LVetgvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~rdtf~G 102 (516)
T KOG0511|consen 40 LCEACRAGDVDRVRYLVETGVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAICSRDTFDG 102 (516)
T ss_pred HHHHhhcccHHHHHHHHHhCCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCcccccccCc
Confidence 47889999999 999999999999999999999999999999999999999998887433333
No 105
>KOG0782|consensus
Probab=98.67 E-value=2.3e-08 Score=71.85 Aligned_cols=91 Identities=29% Similarity=0.399 Sum_probs=81.4
Q ss_pred CCCChhHHHHHHHcCCCC-CCCcCCCCCC--CCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHH
Q psy3338 19 LPEHIPLTIILLTTGRYP-PGHLPICSVD--PNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRA 95 (152)
Q Consensus 19 ~~~~~~~~~~a~~~g~~~-v~~Ll~~~~~--~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a 95 (152)
-+.+..++|+|+..|+-+ |++++++|.. ++..|+.|+|+||-|+..++..++.+|++.|+.+...|..+ .||-.-|
T Consensus 896 ~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r~vc~~lvdagasl~ktd~kg-~tp~era 974 (1004)
T KOG0782|consen 896 GPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNRAVCQLLVDAGASLRKTDSKG-KTPQERA 974 (1004)
T ss_pred CcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchHHHHHHHhcchhheecccCC-CChHHHH
Confidence 456677889999999999 9999999864 56677899999999999999999999999999999888888 8999999
Q ss_pred HHcCCHHHHHHHHhc
Q psy3338 96 ASAANEEIVTLLLDN 110 (152)
Q Consensus 96 ~~~~~~~~~~~Ll~~ 110 (152)
.+.|++++.-+|-++
T Consensus 975 qqa~d~dlaayle~r 989 (1004)
T KOG0782|consen 975 QQAGDPDLAAYLESR 989 (1004)
T ss_pred HhcCCchHHHHHhhh
Confidence 999999999888643
No 106
>KOG0511|consensus
Probab=98.64 E-value=2.4e-07 Score=63.65 Aligned_cols=69 Identities=35% Similarity=0.423 Sum_probs=60.4
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCcHHH
Q psy3338 57 ALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAASAANEEIVTLLLDNGADSTLKDSDGLTALD 126 (152)
Q Consensus 57 ~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~ 126 (152)
-|..||+.|+.+.+++|++.|.++|..|++. ++||.+|+.-||.+++++|+++|+--.....+|...+.
T Consensus 39 elceacR~GD~d~v~~LVetgvnVN~vD~fD-~spL~lAsLcGHe~vvklLLenGAiC~rdtf~G~RC~Y 107 (516)
T KOG0511|consen 39 ELCEACRAGDVDRVRYLVETGVNVNAVDRFD-SSPLYLASLCGHEDVVKLLLENGAICSRDTFDGDRCHY 107 (516)
T ss_pred HHHHHhhcccHHHHHHHHHhCCCcchhhccc-ccHHHHHHHcCcHHHHHHHHHcCCcccccccCcchhhh
Confidence 5889999999999999999999999999999 89999999999999999999999865544446655543
No 107
>KOG3609|consensus
Probab=98.58 E-value=1.1e-07 Score=71.01 Aligned_cols=119 Identities=23% Similarity=0.186 Sum_probs=95.9
Q ss_pred ChhHHHHHHHcCCCC-CCCcCCC----CCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHH
Q psy3338 22 HIPLTIILLTTGRYP-PGHLPIC----SVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAA 96 (152)
Q Consensus 22 ~~~~~~~a~~~g~~~-v~~Ll~~----~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~ 96 (152)
...-+..+++.|+.. |+..++. ..++|..|..|.++|+.|..+.+.++.++|++++... + .++.+|+
T Consensus 25 ~e~~fL~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~------g--dALL~aI 96 (822)
T KOG3609|consen 25 GEKGFLLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE------G--DALLLAI 96 (822)
T ss_pred hhHHHHHHHHcCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCcccc------c--hHHHHHH
Confidence 334457789999998 7777653 2468889999999999999999999999999876544 3 5888999
Q ss_pred HcCCHHHHHHHHhcCCCC----------CccCCCCCcHHHHHHhcCcHHHHHHHHHhCCccc
Q psy3338 97 SAANEEIVTLLLDNGADS----------TLKDSDGLTALDRSRKESHEKISQILLERFSDLQ 148 (152)
Q Consensus 97 ~~~~~~~~~~Ll~~g~~~----------~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~~~~ 148 (152)
..|..+.++.++..-... ...-..+-||+.+|+..++.||+++|+.+|+.+.
T Consensus 97 ~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~~i~ 158 (822)
T KOG3609|consen 97 AVGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQCLLTRGHCIP 158 (822)
T ss_pred HHHHHHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcchHHHHHHHHcCCCCC
Confidence 999999999998753222 1122367899999999999999999999999875
No 108
>KOG0521|consensus
Probab=98.57 E-value=8.9e-08 Score=72.50 Aligned_cols=88 Identities=35% Similarity=0.522 Sum_probs=80.0
Q ss_pred CCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcC
Q psy3338 53 AGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAASAANEEIVTLLLDNGADSTLKDSDGLTALDRSRKES 132 (152)
Q Consensus 53 ~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~ 132 (152)
.|.++||.|+..|..-++++|+++|++++..+..+ ++|+|.+...|+......++++|++.+..+..|.+|+.+|....
T Consensus 655 ~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g-~~plh~~~~~g~~~~~~~ll~~~a~~~a~~~~~~~~l~~a~~~~ 733 (785)
T KOG0521|consen 655 IGCSLLHVAVGTGDSGAVELLLQNGADVNALDSKG-RTPLHHATASGHTSIACLLLKRGADPNAFDPDGKLPLDIAMEAA 733 (785)
T ss_pred cccchhhhhhccchHHHHHHHHhcCCcchhhhccC-CCcchhhhhhcccchhhhhccccccccccCccCcchhhHHhhhc
Confidence 57899999999999999999999999999999988 89999999999999999999999999999999999999998776
Q ss_pred cHHHHHHHH
Q psy3338 133 HEKISQILL 141 (152)
Q Consensus 133 ~~~i~~~L~ 141 (152)
+.+++-++.
T Consensus 734 ~~d~~~l~~ 742 (785)
T KOG0521|consen 734 NADIVLLLR 742 (785)
T ss_pred cccHHHHHh
Confidence 666554443
No 109
>KOG0783|consensus
Probab=98.54 E-value=4e-08 Score=73.38 Aligned_cols=69 Identities=30% Similarity=0.399 Sum_probs=63.7
Q ss_pred CCccccCCCcCHHHHHHHcCCHHHHHHHHhcCCCCCccCC-CCCcHHHHHHhcCcHHHHHHHHHhCCcccc
Q psy3338 80 VNAVTRAGQATPLHRAASAANEEIVTLLLDNGADSTLKDS-DGLTALDRSRKESHEKISQILLERFSDLQT 149 (152)
Q Consensus 80 ~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~-~~~~~l~~a~~~~~~~i~~~L~~~~~~~~~ 149 (152)
.+.+|..| ++++|+++..+...+++||+.+|+++..+|. .|+||||-|+.+|+.+++-.|+.+|..+..
T Consensus 45 anikD~~G-R~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~SL~i 114 (1267)
T KOG0783|consen 45 ANIKDRYG-RTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKGRSLRI 114 (1267)
T ss_pred hhHHHhhc-cceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhhhchHHHHHHHHhcCCceEE
Confidence 66788888 8999999999999999999999999988886 899999999999999999999999987753
No 110
>KOG2384|consensus
Probab=98.32 E-value=3.2e-06 Score=53.03 Aligned_cols=67 Identities=30% Similarity=0.301 Sum_probs=61.9
Q ss_pred CCCCccccCCCcCHHHHHHHcCCHHHHHHHHhcC-CCCCccCCCCCcHHHHHHhcCcHHHHHHHHHhCC
Q psy3338 78 ANVNAVTRAGQATPLHRAASAANEEIVTLLLDNG-ADSTLKDSDGLTALDRSRKESHEKISQILLERFS 145 (152)
Q Consensus 78 ~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g-~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~ 145 (152)
.++|.+|..+ ||++++|+..|..+.+.+|+.+| +.+...+..+.+++.+|-+.|..++++.|.+...
T Consensus 3 ~~in~rD~fg-WTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~ 70 (223)
T KOG2384|consen 3 GNINARDAFG-WTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFENDR 70 (223)
T ss_pred CCccchhhhc-chHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHhc
Confidence 4678888888 99999999999999999999999 8899999999999999999999999999998743
No 111
>KOG0520|consensus
Probab=98.16 E-value=9.3e-07 Score=67.47 Aligned_cols=123 Identities=24% Similarity=0.266 Sum_probs=88.1
Q ss_pred cCCCChhHHHHHHHcCCCC-CCCcCCC-CCCCCCCCCCCccHHHHHHHcCCHHHHHHH-HhcCCCCCccccCCCcCHHHH
Q psy3338 18 ILPEHIPLTIILLTTGRYP-PGHLPIC-SVDPNIPDNAGYTALHYAARSNNKPICLLL-ISRGANVNAVTRAGQATPLHR 94 (152)
Q Consensus 18 ~~~~~~~~~~~a~~~g~~~-v~~Ll~~-~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L-~~~~~~~~~~~~~~~~~~l~~ 94 (152)
-.++++-+ +.++..+..- ++.+++- +......|..|...+|+ |..+..++.-++ ...|..++.+|..| |||||+
T Consensus 571 ~~r~~lll-hL~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hf-ca~lg~ewA~ll~~~~~~ai~i~D~~G-~tpL~w 647 (975)
T KOG0520|consen 571 NFRDMLLL-HLLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHF-CAALGYEWAFLPISADGVAIDIRDRNG-WTPLHW 647 (975)
T ss_pred CCcchHHH-HHHHHHhHHHHHHHHhcccccCchhhcccCCChhhH-hhhcCCceeEEEEeecccccccccCCC-Ccccch
Confidence 34455444 5566666555 6666664 55556666677777888 444555554444 46788889999888 999999
Q ss_pred HHHcCCHHHHHHHHhcCCCCCc------cCCCCCcHHHHHHhcCcHHHHHHHHHh
Q psy3338 95 AASAANEEIVTLLLDNGADSTL------KDSDGLTALDRSRKESHEKISQILLER 143 (152)
Q Consensus 95 a~~~~~~~~~~~Ll~~g~~~~~------~~~~~~~~l~~a~~~~~~~i~~~L~~~ 143 (152)
|..+|+..++..|++.|.+... ....|.|+..+|...|+..+..+|-+.
T Consensus 648 Aa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~lse~ 702 (975)
T KOG0520|consen 648 AAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLSEK 702 (975)
T ss_pred HhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHHhhh
Confidence 9999999999999877665432 234688999999999999988888765
No 112
>KOG0521|consensus
Probab=98.02 E-value=2.3e-06 Score=65.08 Aligned_cols=89 Identities=36% Similarity=0.377 Sum_probs=75.9
Q ss_pred ccCCCChhHHHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHH
Q psy3338 17 PILPEHIPLTIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRA 95 (152)
Q Consensus 17 ~~~~~~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a 95 (152)
.+..+.+++ |.|+..|..- +++|++.|+++|.+|..|.+|+|.+...|+......++.+|++.+..+..+ ..|+.+|
T Consensus 652 ~~~~~~s~l-h~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a~~~~~-~~~l~~a 729 (785)
T KOG0521|consen 652 VLCIGCSLL-HVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHATASGHTSIACLLLKRGADPNAFDPDG-KLPLDIA 729 (785)
T ss_pred hhhcccchh-hhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhhhhcccchhhhhccccccccccCccC-cchhhHH
Confidence 344556666 6688888888 999999999999999999999999999999999999999999999999888 8999999
Q ss_pred HHcCCHHHHHHH
Q psy3338 96 ASAANEEIVTLL 107 (152)
Q Consensus 96 ~~~~~~~~~~~L 107 (152)
....+.+..-++
T Consensus 730 ~~~~~~d~~~l~ 741 (785)
T KOG0521|consen 730 MEAANADIVLLL 741 (785)
T ss_pred hhhccccHHHHH
Confidence 877655554333
No 113
>KOG0520|consensus
Probab=97.71 E-value=3e-05 Score=59.63 Aligned_cols=95 Identities=22% Similarity=0.204 Sum_probs=73.3
Q ss_pred CCCccHHHHHHHcCCHHHHHHHHhc-CCCCCccccCCCcCHHHHHHHcCCHHHHHHHH-hcCCCCCccCCCCCcHHHHHH
Q psy3338 52 NAGYTALHYAARSNNKPICLLLISR-GANVNAVTRAGQATPLHRAASAANEEIVTLLL-DNGADSTLKDSDGLTALDRSR 129 (152)
Q Consensus 52 ~~g~~~L~~a~~~g~~~~~~~L~~~-~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll-~~g~~~~~~~~~~~~~l~~a~ 129 (152)
-.|++.+|+++..+..-.++.+++- +......+..+ .-.+|. |..++.+..-+++ -.|..++.+|..|+||||+|.
T Consensus 572 ~r~~lllhL~a~~lyawLie~~~e~~~~~~~eld~d~-qgV~hf-ca~lg~ewA~ll~~~~~~ai~i~D~~G~tpL~wAa 649 (975)
T KOG0520|consen 572 FRDMLLLHLLAELLYAWLIEKVIEWAGSGDLELDRDG-QGVIHF-CAALGYEWAFLPISADGVAIDIRDRNGWTPLHWAA 649 (975)
T ss_pred CcchHHHHHHHHHhHHHHHHHHhcccccCchhhcccC-CChhhH-hhhcCCceeEEEEeecccccccccCCCCcccchHh
Confidence 4588999999999988888888864 44444455555 567887 4445555554444 467889999999999999999
Q ss_pred hcCcHHHHHHHHHhCCccc
Q psy3338 130 KESHEKISQILLERFSDLQ 148 (152)
Q Consensus 130 ~~~~~~i~~~L~~~~~~~~ 148 (152)
..|+..++..|++.|++..
T Consensus 650 ~~G~e~l~a~l~~lga~~~ 668 (975)
T KOG0520|consen 650 FRGREKLVASLIELGADPG 668 (975)
T ss_pred hcCHHHHHHHHHHhccccc
Confidence 9999999999998877643
No 114
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=97.57 E-value=0.00022 Score=30.07 Aligned_cols=26 Identities=42% Similarity=0.661 Sum_probs=15.0
Q ss_pred CccHHHHHHHcCCHHHHHHHHhcCCC
Q psy3338 54 GYTALHYAARSNNKPICLLLISRGAN 79 (152)
Q Consensus 54 g~~~L~~a~~~g~~~~~~~L~~~~~~ 79 (152)
|.+|+|+++..++.++++.|++.+.+
T Consensus 2 ~~~~l~~~~~~~~~~~~~~ll~~~~~ 27 (30)
T smart00248 2 GRTPLHLAAENGNLEVVKLLLDKGAD 27 (30)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 44566666666666666666555543
No 115
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=97.55 E-value=0.00019 Score=30.27 Aligned_cols=27 Identities=22% Similarity=0.436 Sum_probs=14.6
Q ss_pred CCcHHHHHHhcCcHHHHHHHHHhCCcc
Q psy3338 121 GLTALDRSRKESHEKISQILLERFSDL 147 (152)
Q Consensus 121 ~~~~l~~a~~~~~~~i~~~L~~~~~~~ 147 (152)
+.+|+++|+..+..++++.|++++.++
T Consensus 2 ~~~~l~~~~~~~~~~~~~~ll~~~~~~ 28 (30)
T smart00248 2 GRTPLHLAAENGNLEVVKLLLDKGADI 28 (30)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 445555555555555555555555443
No 116
>KOG2505|consensus
Probab=97.54 E-value=0.00035 Score=50.18 Aligned_cols=62 Identities=26% Similarity=0.194 Sum_probs=46.2
Q ss_pred HHHHHHHHhcCCCCCcc------ccCCCcCHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCcHHHHHH
Q psy3338 67 KPICLLLISRGANVNAV------TRAGQATPLHRAASAANEEIVTLLLDNGADSTLKDSDGLTALDRSR 129 (152)
Q Consensus 67 ~~~~~~L~~~~~~~~~~------~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~ 129 (152)
...+++|..++...|.. +... .|+||+|+.+|..+++.++++.|+++..+|..|.||+.++.
T Consensus 404 p~~ie~lken~lsgnf~~~pe~~~~lt-sT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~ 471 (591)
T KOG2505|consen 404 PDSIEALKENLLSGNFDVTPEANDYLT-STFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLSA 471 (591)
T ss_pred hhHHHHHHhcCCccccccccccccccc-chHHHHHHhcchHHHHHHHHHhcCCchhcccCCCCcccccc
Confidence 45677777777665422 2223 58888888888888888888888888888888888887765
No 117
>KOG2505|consensus
Probab=97.53 E-value=0.00011 Score=52.66 Aligned_cols=75 Identities=24% Similarity=0.243 Sum_probs=58.0
Q ss_pred CChhHHHHHHHcCCCC--CCCcCCCCCCCCC------CCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHH
Q psy3338 21 EHIPLTIILLTTGRYP--PGHLPICSVDPNI------PDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPL 92 (152)
Q Consensus 21 ~~~~~~~~a~~~g~~~--v~~Ll~~~~~~~~------~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l 92 (152)
..|.-+......+... +++|.+++.+.|+ .+..-.|+||+|+..|...++.+|+..|+|+..++..| .||+
T Consensus 389 ~~Te~i~s~lkk~~~p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~G-rtpy 467 (591)
T KOG2505|consen 389 KKTEHIISRLKKKPEPDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGAG-RTPY 467 (591)
T ss_pred hhhHHHHHHHhccCchhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchhcccCC-CCcc
Confidence 3444444445555555 8888877766543 23346789999999999999999999999999999999 8999
Q ss_pred HHHH
Q psy3338 93 HRAA 96 (152)
Q Consensus 93 ~~a~ 96 (152)
.++.
T Consensus 468 ~ls~ 471 (591)
T KOG2505|consen 468 SLSA 471 (591)
T ss_pred cccc
Confidence 9877
No 118
>KOG3609|consensus
Probab=97.32 E-value=0.00042 Score=52.62 Aligned_cols=89 Identities=24% Similarity=0.160 Sum_probs=65.9
Q ss_pred HHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCC---------CccccCCCcCHHHHHH
Q psy3338 27 IILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANV---------NAVTRAGQATPLHRAA 96 (152)
Q Consensus 27 ~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~---------~~~~~~~~~~~l~~a~ 96 (152)
+.|..+.+.+ ++.|++.+... ..+|.+|+..|..+.++.++.+-... +......+.||+..|+
T Consensus 67 ~iai~nenle~~eLLl~~~~~~-------gdALL~aI~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAA 139 (822)
T KOG3609|consen 67 HIAIDNENLELQELLLDTSSEE-------GDALLLAIAVGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAA 139 (822)
T ss_pred ecccccccHHHHHHHhcCcccc-------chHHHHHHHHHHHHHHHHHHhcccccchhccccccCcccCCCCccHHHHHH
Confidence 5677777777 77777765444 34899999999999999998753322 1111222389999999
Q ss_pred HcCCHHHHHHHHhcCCCCCccCCCCC
Q psy3338 97 SAANEEIVTLLLDNGADSTLKDSDGL 122 (152)
Q Consensus 97 ~~~~~~~~~~Ll~~g~~~~~~~~~~~ 122 (152)
..++.++++.|+.+|..+..+.....
T Consensus 140 h~NnyEil~~Ll~kg~~i~~PH~~~C 165 (822)
T KOG3609|consen 140 HLNNFEILQCLLTRGHCIPIPHDIRC 165 (822)
T ss_pred HhcchHHHHHHHHcCCCCCCCccccc
Confidence 99999999999999998876554443
No 119
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=96.89 E-value=0.0091 Score=39.05 Aligned_cols=94 Identities=17% Similarity=0.192 Sum_probs=63.1
Q ss_pred ccHHHHHHHcCCHHHHHHHHhcCCCC--CccccCCCcCHHHHHHH--cCCHHHHHHHHhcC-CCCCc---cCCCCCcHHH
Q psy3338 55 YTALHYAARSNNKPICLLLISRGANV--NAVTRAGQATPLHRAAS--AANEEIVTLLLDNG-ADSTL---KDSDGLTALD 126 (152)
Q Consensus 55 ~~~L~~a~~~g~~~~~~~L~~~~~~~--~~~~~~~~~~~l~~a~~--~~~~~~~~~Ll~~g-~~~~~---~~~~~~~~l~ 126 (152)
.+++-++...+..+++-+|+.+-... +...-..+..-+-++.. .-...++++.+++| ++++. +-.+|.|.|.
T Consensus 180 ~~Am~~si~~~K~dva~~lls~f~ft~~dv~~~~~~~ydieY~LS~h~a~~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLD 259 (284)
T PF06128_consen 180 HQAMWLSIGNAKEDVALYLLSKFNFTKQDVASMEKELYDIEYLLSEHSASYKVLEYFINRGLVDVNKKFQKVNSGDTMLD 259 (284)
T ss_pred HHHHHHHhcccHHHHHHHHHhhcceecchhhhcCcchhhHHHHHhhcCCcHHHHHHHHhccccccchhhhccCCcchHHH
Confidence 45677788888888888888652111 00000000223333333 33567889999988 55553 4458999999
Q ss_pred HHHhcCcHHHHHHHHHhCCccc
Q psy3338 127 RSRKESHEKISQILLERFSDLQ 148 (152)
Q Consensus 127 ~a~~~~~~~i~~~L~~~~~~~~ 148 (152)
.|.+++..+++.+|+++|+-..
T Consensus 260 NA~Ky~~~emi~~Llk~GA~~~ 281 (284)
T PF06128_consen 260 NAMKYKNSEMIAFLLKYGAISG 281 (284)
T ss_pred hHHhcCcHHHHHHHHHcCcccc
Confidence 9999999999999999998543
No 120
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=93.91 E-value=0.12 Score=32.89 Aligned_cols=45 Identities=24% Similarity=0.319 Sum_probs=31.3
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHH
Q psy3338 92 LHRAASAANEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKISQILLE 142 (152)
Q Consensus 92 l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~ 142 (152)
+..|+..|-...+.-.+.+|.+++. +.|..|+..++..++.+++.
T Consensus 147 l~~a~~kgll~F~letlkygg~~~~------~vls~Av~ynhRkIL~yfi~ 191 (192)
T PF03158_consen 147 LEKAAAKGLLPFVLETLKYGGNVDI------IVLSQAVKYNHRKILDYFIR 191 (192)
T ss_pred HHHHHHCCCHHHHHHHHHcCCcccH------HHHHHHHHhhHHHHHHHhhc
Confidence 4567777777766666666655432 67888888888888887764
No 121
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=93.19 E-value=0.29 Score=26.42 Aligned_cols=48 Identities=25% Similarity=0.317 Sum_probs=37.7
Q ss_pred ccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHHHcCCHHHHHHHHhc
Q psy3338 55 YTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAASAANEEIVTLLLDN 110 (152)
Q Consensus 55 ~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~ 110 (152)
...+..|...|+.++++..++.+ .++ ...+..|+..-+-+++++|++.
T Consensus 7 ~~tl~~Ai~GGN~eII~~c~~~~-~~~-------~~~l~~AI~~H~n~i~~~l~~~ 54 (76)
T PF11929_consen 7 KKTLEYAIIGGNFEIINICLKKN-KPD-------NDCLEYAIKSHNNEIADWLIEN 54 (76)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHh-ccH-------HHHHHHHHHHhhHHHHHHHHHh
Confidence 35788999999999999888654 111 3578889998899999999875
No 122
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=91.59 E-value=0.55 Score=25.31 Aligned_cols=48 Identities=23% Similarity=0.313 Sum_probs=39.1
Q ss_pred cCHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHh
Q psy3338 89 ATPLHRAASAANEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKISQILLER 143 (152)
Q Consensus 89 ~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~ 143 (152)
...+..|+..|..++++.+++.+ .+ ....+..|+..-+.+++++|++.
T Consensus 7 ~~tl~~Ai~GGN~eII~~c~~~~-~~------~~~~l~~AI~~H~n~i~~~l~~~ 54 (76)
T PF11929_consen 7 KKTLEYAIIGGNFEIINICLKKN-KP------DNDCLEYAIKSHNNEIADWLIEN 54 (76)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHh-cc------HHHHHHHHHHHhhHHHHHHHHHh
Confidence 45688999999999999988643 11 25568999999999999999976
No 123
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=89.31 E-value=1.8 Score=28.77 Aligned_cols=50 Identities=34% Similarity=0.436 Sum_probs=38.6
Q ss_pred cCCHHHHHHHHhcCC-CCCc---cccCCCcCHHHHHHHcCCHHHHHHHHhcCCCC
Q psy3338 64 SNNKPICLLLISRGA-NVNA---VTRAGQATPLHRAASAANEEIVTLLLDNGADS 114 (152)
Q Consensus 64 ~g~~~~~~~L~~~~~-~~~~---~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~ 114 (152)
..+..++++++.+|. +++. +..+| .|-|.-|+.++..+++..|+++|+-.
T Consensus 227 ~a~~kvL~~Fi~~Glv~vN~~F~~~NSG-dtMLDNA~Ky~~~emi~~Llk~GA~~ 280 (284)
T PF06128_consen 227 SASYKVLEYFINRGLVDVNKKFQKVNSG-DTMLDNAMKYKNSEMIAFLLKYGAIS 280 (284)
T ss_pred CCcHHHHHHHHhccccccchhhhccCCc-chHHHhHHhcCcHHHHHHHHHcCccc
Confidence 345668899998884 3442 33445 79999999999999999999999843
No 124
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=81.41 E-value=5.2 Score=25.75 Aligned_cols=45 Identities=24% Similarity=0.322 Sum_probs=34.3
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHHHcCCHHHHHHHHh
Q psy3338 58 LHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAASAANEEIVTLLLD 109 (152)
Q Consensus 58 L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~ 109 (152)
|..|+..|-.+.+.-.+.+|-+++ .+.+..|+.+++.+++.+++.
T Consensus 147 l~~a~~kgll~F~letlkygg~~~-------~~vls~Av~ynhRkIL~yfi~ 191 (192)
T PF03158_consen 147 LEKAAAKGLLPFVLETLKYGGNVD-------IIVLSQAVKYNHRKILDYFIR 191 (192)
T ss_pred HHHHHHCCCHHHHHHHHHcCCccc-------HHHHHHHHHhhHHHHHHHhhc
Confidence 456888888777666667766554 478999999999999888763
No 125
>KOG1709|consensus
Probab=66.01 E-value=12 Score=25.03 Aligned_cols=40 Identities=20% Similarity=0.102 Sum_probs=34.7
Q ss_pred cCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCC
Q psy3338 40 LPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGAN 79 (152)
Q Consensus 40 Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~ 79 (152)
|++.|+..|..|..+.|+=.+|.+.++.+..+.|++.|+.
T Consensus 1 lle~ga~wn~id~~n~t~gd~a~ern~~rly~~lv~~gv~ 40 (271)
T KOG1709|consen 1 LLEYGAGWNFIDYENKTVGDLALERNQSRLYRRLVEAGVP 40 (271)
T ss_pred CcccCCCccccChhhCCchHHHHHccHHHHHHHHHHcCCc
Confidence 5778899999999999999999999999988988887653
No 126
>KOG3836|consensus
Probab=64.62 E-value=3.3 Score=31.44 Aligned_cols=51 Identities=24% Similarity=0.198 Sum_probs=39.7
Q ss_pred HHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCC
Q psy3338 29 LLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGAN 79 (152)
Q Consensus 29 a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~ 79 (152)
+...+-.. +-.|.+.+..++..|..+.+|+|+++..|+.++++.+.....+
T Consensus 403 ~~~~~~ss~v~~lik~~~~~~~~d~f~~~p~~~~~~sgdp~~~~~~~~~~~~ 454 (605)
T KOG3836|consen 403 AALNNSSSLVFTLIKKGAHPNDDDKFGFTPLHIPQISGDPRIIQLLLNCKVA 454 (605)
T ss_pred hhhcCCccceeeeecccCccchhcccccccccccCCCCCHHHhhhhhhhhhh
Confidence 34455555 6677778888999999999999999999999998888765433
No 127
>KOG1709|consensus
Probab=57.68 E-value=12 Score=25.00 Aligned_cols=41 Identities=22% Similarity=0.220 Sum_probs=35.0
Q ss_pred HHhcCCCCCccccCCCcCHHHHHHHcCCHHHHHHHHhcCCCC
Q psy3338 73 LISRGANVNAVTRAGQATPLHRAASAANEEIVTLLLDNGADS 114 (152)
Q Consensus 73 L~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~ 114 (152)
|+++|+..|..+... .|+=..|.+.++..+.+.|++.|+..
T Consensus 1 lle~ga~wn~id~~n-~t~gd~a~ern~~rly~~lv~~gv~S 41 (271)
T KOG1709|consen 1 LLEYGAGWNFIDYEN-KTVGDLALERNQSRLYRRLVEAGVPS 41 (271)
T ss_pred CcccCCCccccChhh-CCchHHHHHccHHHHHHHHHHcCCch
Confidence 356788888888888 89999999999999999999888764
No 128
>KOG4591|consensus
Probab=44.21 E-value=24 Score=23.23 Aligned_cols=45 Identities=24% Similarity=0.361 Sum_probs=32.0
Q ss_pred cCHHHHHHHcCCHHHH-HHHHhcCCC----CCccCCCCCcHHHHHHhcCc
Q psy3338 89 ATPLHRAASAANEEIV-TLLLDNGAD----STLKDSDGLTALDRSRKESH 133 (152)
Q Consensus 89 ~~~l~~a~~~~~~~~~-~~Ll~~g~~----~~~~~~~~~~~l~~a~~~~~ 133 (152)
..|||.++..++.+++ -++++..+. +|..|..|..+|.+|.....
T Consensus 223 e~~LHk~iki~REDVl~LYfie~dakiP~~LNd~D~nG~~ALdiAL~~~~ 272 (280)
T KOG4591|consen 223 ENPLHKAIKIEREDVLFLYFIEMDAKIPGILNDADHNGALALDIALCREL 272 (280)
T ss_pred cchhHHhhhccccceeeehhhhccccccccccccCCCchHHHHHHHHHHH
Confidence 5789999998888875 455566544 35567788888888766543
No 129
>KOG3836|consensus
Probab=35.40 E-value=9.6 Score=29.17 Aligned_cols=52 Identities=29% Similarity=0.447 Sum_probs=35.7
Q ss_pred HcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHHHcCCHHHHHHHHhcCCCCC
Q psy3338 63 RSNNKPICLLLISRGANVNAVTRAGQATPLHRAASAANEEIVTLLLDNGADST 115 (152)
Q Consensus 63 ~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~ 115 (152)
..+....+-.|+..+...+..+..+ .+|+|+++..|..++++.++..-.+..
T Consensus 405 ~~~~ss~v~~lik~~~~~~~~d~f~-~~p~~~~~~sgdp~~~~~~~~~~~~~~ 456 (605)
T KOG3836|consen 405 LNNSSSLVFTLIKKGAHPNDDDKFG-FTPLHIPQISGDPRIIQLLLNCKVAIS 456 (605)
T ss_pred hcCCccceeeeecccCccchhcccc-cccccccCCCCCHHHhhhhhhhhhhhh
Confidence 3333334444556667777777777 899999999999998887776544433
No 130
>PF04405 ScdA_N: Domain of Unknown function (DUF542) ; InterPro: IPR007500 This is a domain of unknown function found at the N terminus of genes involved in cell wall development and nitrous oxide protection. ScdA is required for normal cell growth and development; mutants have an increased level of peptidoglycan cross-linking and aberrant cellular morphology suggesting a role for ScdA in cell wall metabolism []. NorA1, NorA2, and YtfE are involved in the nitrous oxide response. NorA1 and NorA2, which are similar to YtfE, are co-transcribed with the membrane-bound nitrous oxide (NO) reductases. The genes appear to be involved in NO protection but their function is unknown [, ].
Probab=28.01 E-value=92 Score=15.70 Aligned_cols=34 Identities=15% Similarity=0.167 Sum_probs=20.2
Q ss_pred CHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHH
Q psy3338 100 NEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKI 136 (152)
Q Consensus 100 ~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i 136 (152)
.+.....+-.+|.+... .|..+|.-|+.....+.
T Consensus 12 ~p~~a~vf~~~gIDfCC---gG~~~L~eA~~~~~ld~ 45 (56)
T PF04405_consen 12 DPRAARVFRKYGIDFCC---GGNRSLEEACEEKGLDP 45 (56)
T ss_pred ChHHHHHHHHcCCcccC---CCCchHHHHHHHcCCCH
Confidence 44555666666766544 56667776666554433
No 131
>TIGR00847 ccoS cytochrome oxidase maturation protein, cbb3-type. CcoS from Rhodobacter capsulatus has been shown essential for incorporation of redox-active prosthetic groups (heme, Cu) into cytochrome cbb(3) oxidase. FixS of Bradyrhizobium japonicum appears to have the same function. Members of this family are found so far in organisms with a cbb3-type cytochrome oxidase, including Neisseria meningitidis, Helicobacter pylori, Campylobacter jejuni, Caulobacter crescentus, Bradyrhizobium japonicum, and Rhodobacter capsulatus.
Probab=22.31 E-value=85 Score=15.60 Aligned_cols=14 Identities=21% Similarity=0.309 Sum_probs=10.4
Q ss_pred HHHHHHHcCCCC-CC
Q psy3338 25 LTIILLTTGRYP-PG 38 (152)
Q Consensus 25 ~~~~a~~~g~~~-v~ 38 (152)
.+.+|+++|++| .+
T Consensus 21 ~f~Wavk~GQfDDle 35 (51)
T TIGR00847 21 AFLWSLKSGQYDDLK 35 (51)
T ss_pred HHHHHHccCCCCCCc
Confidence 356888899887 55
No 132
>PF03597 CcoS: Cytochrome oxidase maturation protein cbb3-type; InterPro: IPR004714 Cytochrome cbb3 oxidases are found almost exclusively in Proteobacteria, and represent a distinctive class of proton-pumping respiratory haem-copper oxidases (HCO) that lack many of the key structural features that contribute to the reaction cycle of the intensely studied mitochondrial cytochrome c oxidase (CcO). Expression of cytochrome cbb3 oxidase allows human pathogens to colonise anoxic tissues and agronomically important diazotrophs to sustain nitrogen fixation []. Genes encoding a cytochrome cbb3 oxidase were initially designated fixNOQP (ccoNOQP), the ccoNOQP operon is always found close to a second gene cluster, known as fixGHIS (ccoGHIS) whose expression is necessary for the assembly of a functional cbb3 oxidase. On the basis of their derived amino acid sequences each of the four proteins encoded by the ccoGHIS operon are thought to be membrane-bound. It has been suggested that they may function in concert as a multi-subunit complex, possibly playing a role in the uptake and metabolism of copper required for the assembly of the binuclear centre of cytochrome cbb3 oxidase.
Probab=20.60 E-value=97 Score=14.88 Aligned_cols=14 Identities=7% Similarity=0.221 Sum_probs=9.8
Q ss_pred HHHHHHHcCCCC-CC
Q psy3338 25 LTIILLTTGRYP-PG 38 (152)
Q Consensus 25 ~~~~a~~~g~~~-v~ 38 (152)
.+.+|+++|++| .+
T Consensus 20 ~f~Wavk~GQfdD~e 34 (45)
T PF03597_consen 20 AFLWAVKSGQFDDLE 34 (45)
T ss_pred HHHHHHccCCCCCCc
Confidence 346788888877 44
No 133
>PF12645 HTH_16: Helix-turn-helix domain; InterPro: IPR024760 This domain appears to be a helix-turn-helix domain, suggesting a transcriptional regulatory protein. Some proteins with this domain are annotated as conjugative transposon proteins.
Probab=20.24 E-value=1.5e+02 Score=15.41 Aligned_cols=20 Identities=10% Similarity=0.097 Sum_probs=12.9
Q ss_pred HHHHHHHcCCHHHHHHHHhc
Q psy3338 57 ALHYAARSNNKPICLLLISR 76 (152)
Q Consensus 57 ~L~~a~~~g~~~~~~~L~~~ 76 (152)
++..+|..|+.+.++.++.+
T Consensus 2 ~vI~~A~~GD~~A~~~IL~~ 21 (65)
T PF12645_consen 2 EVIKAAKQGDPEAMEEILKH 21 (65)
T ss_pred HHHHHHHcCCHHHHHHHHHH
Confidence 34566777777776666643
Done!