Query psy3338
Match_columns 152
No_of_seqs 150 out of 1721
Neff 11.2
Searched_HMMs 29240
Date Fri Aug 16 22:24:23 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3338.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/3338hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 100.0 3.4E-33 1.1E-37 174.6 11.7 137 11-149 27-164 (169)
2 4gpm_A Engineered protein OR26 100.0 2.7E-31 9.3E-36 165.9 11.4 123 26-149 8-131 (169)
3 1d9s_A Cyclin-dependent kinase 100.0 4E-31 1.4E-35 159.8 8.5 130 14-146 5-136 (136)
4 1n0r_A 4ANK, 4 ankyrin repeats 100.0 3.1E-29 1.1E-33 149.1 11.2 124 21-146 2-126 (126)
5 2jab_A H10-2-G3; HER2, darpin, 100.0 4.1E-29 1.4E-33 150.9 10.8 122 21-144 14-136 (136)
6 4b93_B Ankyrin repeat domain-c 100.0 8.1E-29 2.8E-33 165.2 13.1 133 15-149 80-213 (269)
7 1bi7_B P16INK4A, MTS1, multipl 100.0 8.8E-30 3E-34 157.1 6.1 129 18-149 9-139 (156)
8 3v30_A DNA-binding protein rfx 100.0 7E-29 2.4E-33 155.2 10.0 131 17-149 32-163 (172)
9 3v31_A Ankyrin repeat family A 100.0 1E-28 3.6E-33 153.7 10.6 133 16-150 31-164 (167)
10 3v31_A Ankyrin repeat family A 100.0 7.8E-29 2.7E-33 154.3 9.9 128 20-149 2-130 (167)
11 2y1l_E Darpin-8.4; hydrolase-i 100.0 1.9E-28 6.5E-33 152.9 11.3 123 25-148 17-140 (169)
12 1ihb_A P18-INK4C(INK6), cyclin 100.0 7.6E-29 2.6E-33 153.6 9.3 128 16-146 33-162 (162)
13 2rfm_A Putative ankyrin repeat 100.0 2E-28 6.8E-33 155.7 11.4 130 18-149 32-162 (192)
14 2y1l_E Darpin-8.4; hydrolase-i 100.0 3.5E-28 1.2E-32 151.7 12.0 127 16-144 42-169 (169)
15 3f6q_A Integrin-linked protein 100.0 1.6E-28 5.4E-33 154.6 10.1 132 16-149 34-166 (179)
16 1awc_B Protein (GA binding pro 100.0 4.3E-28 1.5E-32 149.1 11.2 121 18-140 31-152 (153)
17 3twr_A Tankyrase-2; ankyrin re 100.0 2.4E-28 8.2E-33 151.8 9.9 122 21-145 42-164 (165)
18 2rfm_A Putative ankyrin repeat 100.0 5.5E-28 1.9E-32 153.6 10.8 126 17-144 64-190 (192)
19 2vge_A RELA-associated inhibit 100.0 1.4E-28 4.7E-33 160.6 7.5 123 26-149 25-151 (229)
20 1awc_B Protein (GA binding pro 99.9 1.6E-27 5.5E-32 146.5 10.6 124 23-149 4-128 (153)
21 1ihb_A P18-INK4C(INK6), cyclin 99.9 1.8E-27 6E-32 147.4 10.5 124 21-147 5-129 (162)
22 3v30_A DNA-binding protein rfx 99.9 1.1E-27 3.9E-32 149.7 9.6 126 22-149 3-130 (172)
23 3f6q_A Integrin-linked protein 99.9 1.9E-27 6.6E-32 149.6 10.4 127 21-149 5-133 (179)
24 3aji_A 26S proteasome non-ATPa 99.9 4.8E-27 1.7E-31 153.0 12.7 129 18-148 70-199 (231)
25 1oy3_D Transcription factor in 99.9 5E-27 1.7E-31 156.7 13.0 103 47-149 151-253 (282)
26 2f8y_A Notch homolog 1, transl 99.9 6E-27 2.1E-31 151.8 13.0 131 18-150 89-220 (223)
27 1ikn_D Protein (I-kappa-B-alph 99.9 9.8E-27 3.4E-31 152.1 13.8 130 18-149 42-179 (236)
28 1bd8_A P19INK4D CDK4/6 inhibit 99.9 3E-27 1E-31 145.6 10.3 124 16-143 31-155 (156)
29 3twr_A Tankyrase-2; ankyrin re 99.9 6E-27 2.1E-31 145.5 11.7 127 21-149 8-136 (165)
30 1yyh_A HN1;, notch 1, ankyrin 99.9 6.5E-27 2.2E-31 154.5 11.5 110 31-141 133-243 (253)
31 3c5r_A BARD-1, BRCA1-associate 99.9 4.5E-28 1.5E-32 146.4 5.5 129 16-146 5-134 (137)
32 2rfa_A Transient receptor pote 99.9 6.4E-27 2.2E-31 152.5 11.0 128 20-149 2-149 (232)
33 1yyh_A HN1;, notch 1, ankyrin 99.9 1.8E-26 6.2E-31 152.4 13.1 134 14-149 83-218 (253)
34 2dzn_A Probable 26S proteasome 99.9 1.4E-26 4.9E-31 150.4 12.4 130 18-149 69-203 (228)
35 3jxi_A Vanilloid receptor-rela 99.9 9.8E-28 3.4E-32 158.8 6.6 128 20-149 92-253 (260)
36 1s70_B 130 kDa myosin-binding 99.9 1.4E-26 4.8E-31 155.9 12.4 134 15-149 67-260 (299)
37 2xai_A ASB-9, ankyrin repeat a 99.9 2E-26 7E-31 152.8 12.7 132 15-149 30-162 (261)
38 3hra_A Ankyrin repeat family p 99.9 1.8E-26 6.3E-31 147.3 11.8 132 16-149 34-173 (201)
39 4b93_B Ankyrin repeat domain-c 99.9 1.7E-26 5.8E-31 154.0 11.9 129 19-149 50-180 (269)
40 2xai_A ASB-9, ankyrin repeat a 99.9 1.2E-26 4.3E-31 153.9 11.1 127 20-149 2-129 (261)
41 2etb_A Transient receptor pote 99.9 1.6E-27 5.5E-32 157.6 6.8 128 19-148 88-248 (256)
42 3aji_A 26S proteasome non-ATPa 99.9 1.7E-26 5.9E-31 150.3 11.5 130 18-149 37-167 (231)
43 1ycs_B 53BP2, P53BP2; ankyrin 99.9 1.1E-26 3.9E-31 152.3 10.5 126 22-149 38-167 (239)
44 1ycs_B 53BP2, P53BP2; ankyrin 99.9 3.9E-27 1.3E-31 154.5 8.2 127 20-149 4-131 (239)
45 3aaa_C Myotrophin, protein V-1 99.9 3.2E-27 1.1E-31 140.2 6.7 114 21-136 7-121 (123)
46 2f8y_A Notch homolog 1, transl 99.9 4.5E-26 1.6E-30 147.6 12.7 128 19-148 23-152 (223)
47 2rfa_A Transient receptor pote 99.9 1.7E-26 5.8E-31 150.5 10.6 128 18-147 34-184 (232)
48 2pnn_A Transient receptor pote 99.9 4.3E-27 1.5E-31 156.9 7.9 126 19-146 99-258 (273)
49 1ikn_D Protein (I-kappa-B-alph 99.9 1.2E-26 4.1E-31 151.7 9.9 130 17-148 74-211 (236)
50 3b7b_A Euchromatic histone-lys 99.9 6.6E-26 2.2E-30 148.1 12.9 127 20-148 76-204 (237)
51 3ljn_A Hypothetical protein; a 99.9 8.1E-27 2.8E-31 161.2 8.8 129 17-147 134-270 (364)
52 3b7b_A Euchromatic histone-lys 99.9 8.6E-26 2.9E-30 147.5 12.5 128 19-148 42-171 (237)
53 3d9h_A CDNA FLJ77766, highly s 99.9 5.6E-26 1.9E-30 152.6 11.7 129 17-148 55-184 (285)
54 1oy3_D Transcription factor in 99.9 2E-26 7E-31 153.8 9.6 131 17-149 41-220 (282)
55 3d9h_A CDNA FLJ77766, highly s 99.9 7.6E-26 2.6E-30 151.9 12.3 130 16-148 87-217 (285)
56 3ehr_A Osteoclast-stimulating 99.9 3.7E-27 1.3E-31 152.9 5.7 126 21-148 73-200 (222)
57 1k1a_A B-cell lymphoma 3-encod 99.9 8.3E-26 2.8E-30 147.8 12.2 127 20-148 78-210 (241)
58 1n11_A Ankyrin; clathrin, BAND 99.9 7.2E-26 2.5E-30 159.7 12.4 131 17-149 241-372 (437)
59 1bd8_A P19INK4D CDK4/6 inhibit 99.9 2.2E-26 7.7E-31 141.6 8.3 123 22-148 3-127 (156)
60 1n0q_A 3ANK, 3 ankyrin repeats 99.9 2.5E-25 8.4E-30 125.9 12.0 93 53-146 1-93 (93)
61 2etb_A Transient receptor pote 99.9 3E-26 1E-30 151.5 9.5 129 17-147 39-207 (256)
62 3hra_A Ankyrin repeat family p 99.9 7.3E-26 2.5E-30 144.5 10.9 128 15-144 66-201 (201)
63 3lvq_E ARF-GAP with SH3 domain 99.9 6.9E-26 2.4E-30 162.4 11.5 125 24-149 134-268 (497)
64 3ui2_A Signal recognition part 99.9 3.6E-26 1.2E-30 150.4 9.2 124 20-146 44-185 (244)
65 3kea_A K1L; tropism, ANK repea 99.9 1.7E-26 5.9E-31 155.1 7.6 127 17-147 27-155 (285)
66 3deo_A Signal recognition part 99.9 4.3E-26 1.5E-30 144.0 8.8 109 20-131 43-153 (183)
67 3t8k_A Uncharacterized protein 99.9 4.7E-27 1.6E-31 148.8 4.3 128 19-148 36-181 (186)
68 1k1a_A B-cell lymphoma 3-encod 99.9 3.1E-25 1.1E-29 145.1 12.6 132 16-149 41-178 (241)
69 2dzn_A Probable 26S proteasome 99.9 1.6E-25 5.4E-30 145.5 10.6 130 17-148 32-168 (228)
70 1dcq_A PYK2-associated protein 99.9 1.6E-25 5.4E-30 149.9 10.8 122 26-148 134-265 (278)
71 1wdy_A 2-5A-dependent ribonucl 99.9 3.2E-25 1.1E-29 147.9 12.1 129 19-149 146-281 (285)
72 4hbd_A KN motif and ankyrin re 99.9 6.8E-26 2.3E-30 151.5 8.6 125 18-144 108-273 (276)
73 1n11_A Ankyrin; clathrin, BAND 99.9 1.6E-25 5.6E-30 157.9 10.5 124 21-146 14-138 (437)
74 3kea_A K1L; tropism, ANK repea 99.9 4.1E-26 1.4E-30 153.2 7.0 127 20-148 61-188 (285)
75 1wdy_A 2-5A-dependent ribonucl 99.9 3.3E-25 1.1E-29 147.9 11.3 126 22-149 6-133 (285)
76 2b0o_E UPLC1; arfgap, structur 99.9 1.6E-25 5.4E-30 151.4 9.6 122 25-147 154-285 (301)
77 3utm_A Tankyrase-1; tankyrase, 99.9 6.8E-25 2.3E-29 150.3 12.8 60 89-148 248-307 (351)
78 4hbd_A KN motif and ankyrin re 99.9 1.2E-25 4.2E-30 150.3 8.8 93 17-111 179-273 (276)
79 2pnn_A Transient receptor pote 99.9 1.1E-25 3.7E-30 150.1 8.5 129 18-148 51-220 (273)
80 3utm_A Tankyrase-1; tankyrase, 99.9 8.1E-25 2.8E-29 149.9 12.6 125 23-149 26-152 (351)
81 1s70_B 130 kDa myosin-binding 99.9 3.1E-25 1.1E-29 149.4 10.3 127 21-149 40-227 (299)
82 3c5r_A BARD-1, BRCA1-associate 99.9 1.4E-24 4.9E-29 131.0 12.2 104 44-149 1-104 (137)
83 3jxi_A Vanilloid receptor-rela 99.9 1.9E-25 6.6E-30 147.8 9.0 129 19-148 44-212 (260)
84 3ljn_A Hypothetical protein; a 99.9 2.3E-25 7.9E-30 153.9 9.4 98 50-148 134-238 (364)
85 1sw6_A Regulatory protein SWI6 99.9 7.9E-26 2.7E-30 154.5 6.9 131 17-149 127-311 (327)
86 2fo1_E LIN-12 protein; beta-ba 99.9 1.6E-24 5.4E-29 150.4 13.4 129 19-149 123-266 (373)
87 3jue_A Arfgap with coiled-coil 99.9 6.1E-25 2.1E-29 151.9 10.2 121 25-146 202-326 (368)
88 3eu9_A Huntingtin-interacting 99.9 1.4E-24 4.7E-29 141.7 11.1 127 21-148 9-136 (240)
89 4g8k_A 2-5A-dependent ribonucl 99.9 5.3E-24 1.8E-28 145.7 12.7 105 38-148 223-328 (337)
90 2fo1_E LIN-12 protein; beta-ba 99.9 9.6E-25 3.3E-29 151.5 9.0 109 37-146 254-371 (373)
91 1d9s_A Cyclin-dependent kinase 99.9 3.1E-24 1.1E-28 129.4 9.6 104 44-149 2-106 (136)
92 2l6b_A NR1C; ankyrin, consensu 99.9 4.4E-24 1.5E-28 125.2 9.1 100 49-149 4-103 (115)
93 3eu9_A Huntingtin-interacting 99.9 6.7E-24 2.3E-28 138.4 10.9 125 21-147 76-203 (240)
94 3aaa_C Myotrophin, protein V-1 99.9 4.8E-23 1.7E-27 122.1 11.5 98 51-149 4-101 (123)
95 4g8k_A 2-5A-dependent ribonucl 99.9 2.3E-23 7.7E-28 142.6 10.7 126 22-149 26-153 (337)
96 2vge_A RELA-associated inhibit 99.9 1.4E-22 4.9E-27 132.1 12.7 112 37-149 1-115 (229)
97 1n0q_A 3ANK, 3 ankyrin repeats 99.9 2.2E-23 7.6E-28 117.8 7.2 91 21-113 2-93 (93)
98 3t8k_A Uncharacterized protein 99.9 3.2E-24 1.1E-28 135.8 2.7 124 22-149 7-149 (186)
99 3deo_A Signal recognition part 99.9 1.8E-23 6.3E-28 131.9 5.9 118 30-149 8-138 (183)
100 2jab_A H10-2-G3; HER2, darpin, 99.9 2.6E-22 8.9E-27 120.9 10.4 98 51-149 11-108 (136)
101 1n0r_A 4ANK, 4 ankyrin repeats 99.9 1.7E-21 5.9E-26 115.4 12.0 96 53-149 1-96 (126)
102 2l6b_A NR1C; ankyrin, consensu 99.9 4.1E-23 1.4E-27 121.0 4.5 106 18-125 6-112 (115)
103 2zgd_A 3 repeat synthetic anky 99.9 1.7E-21 5.8E-26 113.3 10.4 93 47-140 17-109 (110)
104 1bi7_B P16INK4A, MTS1, multipl 99.9 8.2E-22 2.8E-26 121.3 8.5 100 48-149 6-106 (156)
105 3ehr_A Osteoclast-stimulating 99.9 1.8E-21 6.2E-26 126.1 10.2 98 51-149 70-168 (222)
106 1sw6_A Regulatory protein SWI6 99.9 1.4E-22 4.7E-27 138.5 4.6 117 27-144 102-228 (327)
107 2b0o_E UPLC1; arfgap, structur 99.8 3.1E-22 1.1E-26 135.3 3.4 109 18-134 187-299 (301)
108 2aja_A Ankyrin repeat family p 99.8 5.4E-23 1.8E-27 142.6 -1.0 123 21-146 92-224 (376)
109 3ui2_A Signal recognition part 99.8 9.1E-21 3.1E-25 124.6 9.5 96 52-149 43-139 (244)
110 3lvq_E ARF-GAP with SH3 domain 99.8 5.5E-20 1.9E-24 131.9 6.6 105 18-124 168-276 (497)
111 2aja_A Ankyrin repeat family p 99.8 8.4E-23 2.9E-27 141.7 -7.9 118 21-148 128-252 (376)
112 2zgd_A 3 repeat synthetic anky 99.8 1.3E-19 4.5E-24 105.3 5.5 88 18-107 21-109 (110)
113 1dcq_A PYK2-associated protein 99.8 1.6E-19 5.5E-24 120.8 6.6 95 18-114 166-264 (278)
114 3jue_A Arfgap with coiled-coil 99.8 2.1E-18 7.3E-23 119.3 10.3 96 53-149 198-296 (368)
115 1gp8_A Protein (scaffolding pr 34.2 35 0.0012 15.1 2.7 18 125-142 17-34 (40)
116 3qil_A Clathrin heavy chain 1; 31.0 32 0.0011 19.8 2.0 31 79-110 27-57 (125)
117 2dag_A Ubiquitin carboxyl-term 30.7 42 0.0014 17.3 2.3 12 135-146 40-51 (74)
118 1vek_A UBP14, ubiquitin-specif 23.8 50 0.0017 17.5 1.9 11 67-77 30-40 (84)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=3.4e-33 Score=174.55 Aligned_cols=137 Identities=35% Similarity=0.433 Sum_probs=121.1
Q ss_pred CCCCccccCCCChhHHHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCc
Q psy3338 11 DLPTCKPILPEHIPLTIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQA 89 (152)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~ 89 (152)
+.........|.||+ ++|+..++.+ +++|++.|++++.+|..|.||||+|+..|+.+++++|+++|++++.++..+ +
T Consensus 27 Gadvn~~d~~g~t~l-~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gadvn~~d~~G-~ 104 (169)
T 4gpm_A 27 GADVNASDSDGRTPL-HHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDG-R 104 (169)
T ss_dssp TCCTTCCCTTSCCHH-HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTS-C
T ss_pred CCCCCCcCCCCCCHH-HHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCC-C
Confidence 344445566788887 5688999999 999999999999999999999999999999999999999999999999888 8
Q ss_pred CHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHhCCcccc
Q psy3338 90 TPLHRAASAANEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKISQILLERFSDLQT 149 (152)
Q Consensus 90 ~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~~~~~ 149 (152)
||||+|+..|+.+++++|++.|++++.++..|.|||++|+..|+.+++++|+++|++++-
T Consensus 105 TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~ie~ 164 (169)
T 4gpm_A 105 TPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLEH 164 (169)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC------
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCC
Confidence 999999999999999999999999999999999999999999999999999999999874
No 2
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.97 E-value=2.7e-31 Score=165.91 Aligned_cols=123 Identities=38% Similarity=0.542 Sum_probs=118.6
Q ss_pred HHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHHHcCCHHHH
Q psy3338 26 TIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAASAANEEIV 104 (152)
Q Consensus 26 ~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~ 104 (152)
++.|++.|+.+ |+.|++.|+|++.+|..|.||||+|+..++.+++++|+++|++++.++..+ +||||+|+..|+.+++
T Consensus 8 L~~Aa~~G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g-~TpLh~A~~~g~~~~v 86 (169)
T 4gpm_A 8 LIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDG-RTPLHHAAENGHKEVV 86 (169)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTS-CCHHHHHHHTTCHHHH
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCC-CCHHHHHHHcCCHHHH
Confidence 46799999999 999999999999999999999999999999999999999999999999888 8999999999999999
Q ss_pred HHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHhCCcccc
Q psy3338 105 TLLLDNGADSTLKDSDGLTALDRSRKESHEKISQILLERFSDLQT 149 (152)
Q Consensus 105 ~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~~~~~ 149 (152)
++|++.|++++.++..|+|||++|+..|+.+++++|+++|++++.
T Consensus 87 ~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~ 131 (169)
T 4gpm_A 87 KLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNT 131 (169)
T ss_dssp HHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccc
Confidence 999999999999999999999999999999999999999998864
No 3
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.97 E-value=4e-31 Score=159.75 Aligned_cols=130 Identities=21% Similarity=0.222 Sum_probs=121.2
Q ss_pred CccccCCCChhHHHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccC-CCcCH
Q psy3338 14 TCKPILPEHIPLTIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRA-GQATP 91 (152)
Q Consensus 14 ~~~~~~~~~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~-~~~~~ 91 (152)
.......+.+|+ +.|+..|+.+ +++|++.|++++.++..|.||||+|+. |+.+++++|+++|++++..+.. + +||
T Consensus 5 ~~~~~~~g~t~L-~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g-~t~ 81 (136)
T 1d9s_A 5 IHMLGGSSDAGL-ATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATL-TRP 81 (136)
T ss_dssp CSCCCCCCSCHH-HHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTT-BCH
T ss_pred ccCCCCCCccHH-HHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCC-CCH
Confidence 334456677887 6688999999 999999999999999999999999999 9999999999999999999988 6 899
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHhCCc
Q psy3338 92 LHRAASAANEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKISQILLERFSD 146 (152)
Q Consensus 92 l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~~ 146 (152)
||+|+..++.+++++|++.|++++.++..|.|||++|+..++.+++++|+++|++
T Consensus 82 L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 82 VHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp HHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 9999999999999999999999999999999999999999999999999999985
No 4
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.96 E-value=3.1e-29 Score=149.09 Aligned_cols=124 Identities=36% Similarity=0.496 Sum_probs=117.9
Q ss_pred CChhHHHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHHHcC
Q psy3338 21 EHIPLTIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAASAA 99 (152)
Q Consensus 21 ~~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~~~ 99 (152)
|.||+ +.|+..|+.+ +++|++.|.+++..+..|.||||+|+..|+.+++++|+++|++++..+..+ +||+|+|+..+
T Consensus 2 g~t~L-~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g-~t~l~~A~~~~ 79 (126)
T 1n0r_A 2 GRTPL-HLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNG-RTPLHLAARNG 79 (126)
T ss_dssp CCCHH-HHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTS-CCHHHHHHHTT
T ss_pred CccHH-HHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCC-CcHHHHHHHcC
Confidence 56777 6688999999 999999999999999999999999999999999999999999999888888 89999999999
Q ss_pred CHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHhCCc
Q psy3338 100 NEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKISQILLERFSD 146 (152)
Q Consensus 100 ~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~~ 146 (152)
+.+++++|++.|++++.++..|.||+++|+..++.+++++|+++|++
T Consensus 80 ~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 80 HLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred hHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 99999999999999999999999999999999999999999999985
No 5
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.96 E-value=4.1e-29 Score=150.89 Aligned_cols=122 Identities=34% Similarity=0.358 Sum_probs=114.9
Q ss_pred CChhHHHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHHHcC
Q psy3338 21 EHIPLTIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAASAA 99 (152)
Q Consensus 21 ~~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~~~ 99 (152)
+.+|+ +.|+..|+.+ +++|++.|++++.+|..|.||||+|+..|+.+++++|+++|++++..+..+ +||||+|+..+
T Consensus 14 ~~t~l-~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g-~t~L~~A~~~~ 91 (136)
T 2jab_A 14 LGKKL-LEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIG-FTPLHLAAFIG 91 (136)
T ss_dssp HHHHH-HHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTC-CCHHHHHHHHT
T ss_pred ccHHH-HHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCC-CCHHHHHHHcC
Confidence 44444 7799999999 999999999999999999999999999999999999999999999988888 89999999999
Q ss_pred CHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHhC
Q psy3338 100 NEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKISQILLERF 144 (152)
Q Consensus 100 ~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~ 144 (152)
+.+++++|++.|++++.++..|.|||++|+..++.+++++|+++|
T Consensus 92 ~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 92 HLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred CHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 999999999999999999999999999999999999999999876
No 6
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.96 E-value=8.1e-29 Score=165.17 Aligned_cols=133 Identities=25% Similarity=0.273 Sum_probs=123.3
Q ss_pred ccccCCCChhHHHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHH
Q psy3338 15 CKPILPEHIPLTIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLH 93 (152)
Q Consensus 15 ~~~~~~~~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~ 93 (152)
......|.||+ ++|+..|+.+ +++|++.|++++.++..|.||+++|+..++.+++++|+++|++++.++..+ +||||
T Consensus 80 n~~d~~G~TpL-h~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g-~TpL~ 157 (269)
T 4b93_B 80 NVTSQDGSSPL-HVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSG-NTPLI 157 (269)
T ss_dssp TCCCTTSCCHH-HHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTC-CCHHH
T ss_pred CCcCCCCCCHH-HHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCC-CCHHH
Confidence 34456688888 5688999999 999999999999999999999999999999999999999999999998888 89999
Q ss_pred HHHHcCCHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHhCCcccc
Q psy3338 94 RAASAANEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKISQILLERFSDLQT 149 (152)
Q Consensus 94 ~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~~~~~ 149 (152)
+|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|+++|++++.
T Consensus 158 ~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~ 213 (269)
T 4b93_B 158 YACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQV 213 (269)
T ss_dssp HHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCC
T ss_pred HHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999998863
No 7
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.96 E-value=8.8e-30 Score=157.15 Aligned_cols=129 Identities=22% Similarity=0.278 Sum_probs=116.5
Q ss_pred cCCCChhHHHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcC-HHHHH
Q psy3338 18 ILPEHIPLTIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQAT-PLHRA 95 (152)
Q Consensus 18 ~~~~~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~-~l~~a 95 (152)
...+.+|+ ++|+..|+.+ +++|++.|++++.++..|.||||+|+ .|+.+++++|+++|++++..+..+ +| |||+|
T Consensus 9 ~~~~~t~L-~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g-~ttpL~~A 85 (156)
T 1bi7_B 9 MEPSADWL-ATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPAT-LTRPVHDA 85 (156)
T ss_dssp -CCSTTHH-HHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTT-CCCHHHHH
T ss_pred CccchHHH-HHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCC-CcHHHHHH
Confidence 45567777 6688999999 99999999999999999999999985 899999999999999999999888 78 99999
Q ss_pred HHcCCHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHhCCcccc
Q psy3338 96 ASAANEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKISQILLERFSDLQT 149 (152)
Q Consensus 96 ~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~~~~~ 149 (152)
+..|+.+++++|++.|++++.++..|.|||++|+..++.+++++|+++|++++.
T Consensus 86 ~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~ 139 (156)
T 1bi7_B 86 AREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRG 139 (156)
T ss_dssp HHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC-----
T ss_pred HHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCc
Confidence 999999999999999999999999999999999999999999999999998864
No 8
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.96 E-value=7e-29 Score=155.21 Aligned_cols=131 Identities=27% Similarity=0.306 Sum_probs=122.0
Q ss_pred ccCCCChhHHHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHH
Q psy3338 17 PILPEHIPLTIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRA 95 (152)
Q Consensus 17 ~~~~~~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a 95 (152)
....+.||+ ++|+..|+.+ +++|++.|++++.++..|.||||+|+..|+.+++++|+++|++++..+..+ +||||+|
T Consensus 32 ~~~~g~t~L-~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g-~t~L~~A 109 (172)
T 3v30_A 32 PDERGFTPL-IWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLLERDVDINIYDWNG-GTPLLYA 109 (172)
T ss_dssp CCTTSCCHH-HHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTS-CCHHHHH
T ss_pred CCCCCCCHH-HHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCC-CCHHHHH
Confidence 345677887 6688999999 999999999999999999999999999999999999999999999988888 8999999
Q ss_pred HHcCCHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHhCCcccc
Q psy3338 96 ASAANEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKISQILLERFSDLQT 149 (152)
Q Consensus 96 ~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~~~~~ 149 (152)
+..++.+++++|++.|++++.++..|.||+++|+..++.+++++|+++|+++..
T Consensus 110 ~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~~~ 163 (172)
T 3v30_A 110 VRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIENHILKLFQ 163 (172)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHHSC
T ss_pred HHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCcHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999987653
No 9
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.96 E-value=1e-28 Score=153.74 Aligned_cols=133 Identities=23% Similarity=0.333 Sum_probs=112.9
Q ss_pred cccCCCChhHHHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHH
Q psy3338 16 KPILPEHIPLTIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHR 94 (152)
Q Consensus 16 ~~~~~~~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~ 94 (152)
.....+.||+ ++|+..|+.+ +++|++.|++++..+..|.||||+|+..|+.+++++|+++|++++..+..+ +||||+
T Consensus 31 ~~~~~g~t~L-~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g-~t~L~~ 108 (167)
T 3v31_A 31 HTDEEGFTPL-MWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNG-GTPLLY 108 (167)
T ss_dssp CCCTTSCCHH-HHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTS-CCHHHH
T ss_pred CCCCCCCCHH-HHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCcCCCCC-CCHHHH
Confidence 3445567776 5678888888 888888888888888888999999999999999999998888888888777 789999
Q ss_pred HHHcCCHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHhCCccccc
Q psy3338 95 AASAANEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKISQILLERFSDLQTN 150 (152)
Q Consensus 95 a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~~~~~~ 150 (152)
|+..++.+++++|++.|++++.++..|.||+++|+..|+.+++++|++++.++..+
T Consensus 109 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~~~~ 164 (167)
T 3v31_A 109 AVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVIESHLLKLLQN 164 (167)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHHCSS
T ss_pred HHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHHHHHHHHH
Confidence 99999999999999888888888888999999999999999999998888776544
No 10
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.96 E-value=7.8e-29 Score=154.30 Aligned_cols=128 Identities=25% Similarity=0.276 Sum_probs=120.6
Q ss_pred CCChhHHHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHHHc
Q psy3338 20 PEHIPLTIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAASA 98 (152)
Q Consensus 20 ~~~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~~ 98 (152)
.+.||+ +.|+..|+.+ +++|++.+.+++.+|..|.||||+|+..|+.+++++|+++|++++..+..+ .||+|+|+..
T Consensus 2 ~~~t~L-~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g-~t~L~~A~~~ 79 (167)
T 3v31_A 2 ANSLSV-HQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGR-ESALSLACSK 79 (167)
T ss_dssp TTCCCH-HHHHHTTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTC-CCHHHHHHHH
T ss_pred CCcchH-HHHHHCCCHHHHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCC-CcHHHHHHHc
Confidence 356777 6688999999 999999999999999999999999999999999999999999999888888 8999999999
Q ss_pred CCHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHhCCcccc
Q psy3338 99 ANEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKISQILLERFSDLQT 149 (152)
Q Consensus 99 ~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~~~~~ 149 (152)
++.+++++|++.|++++..+..|.|||++|+..++.+++++|+++|++++.
T Consensus 80 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~ 130 (167)
T 3v31_A 80 GYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTI 130 (167)
T ss_dssp TCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred CCHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 999999999999999999999999999999999999999999999998763
No 11
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.96 E-value=1.9e-28 Score=152.94 Aligned_cols=123 Identities=37% Similarity=0.440 Sum_probs=90.3
Q ss_pred HHHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHHHcCCHHH
Q psy3338 25 LTIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAASAANEEI 103 (152)
Q Consensus 25 ~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~ 103 (152)
.++.|++.|+.+ +++|++.|++++.+|..|.||||+|+..|+.+++++|+++|++++..+..+ +||||+|+..++.++
T Consensus 17 ~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g-~t~L~~A~~~~~~~~ 95 (169)
T 2y1l_E 17 KLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAG-MTPLRLAALFGHLEI 95 (169)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTS-CCHHHHHHHTTCHHH
T ss_pred hHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCC-CCHHHHHHHcCCHHH
Confidence 346677777777 777777777777777777777777777777777777777777777666666 677777777777777
Q ss_pred HHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHhCCccc
Q psy3338 104 VTLLLDNGADSTLKDSDGLTALDRSRKESHEKISQILLERFSDLQ 148 (152)
Q Consensus 104 ~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~~~~ 148 (152)
+++|++.|++++..+..|.|||++|+..++.+++++|+++|++++
T Consensus 96 ~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 140 (169)
T 2y1l_E 96 VEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVN 140 (169)
T ss_dssp HHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred HHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 777777777777777777777777777777777777777777654
No 12
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.96 E-value=7.6e-29 Score=153.56 Aligned_cols=128 Identities=22% Similarity=0.287 Sum_probs=103.0
Q ss_pred cccCCCChhHHHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHH
Q psy3338 16 KPILPEHIPLTIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHR 94 (152)
Q Consensus 16 ~~~~~~~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~ 94 (152)
.....+.+|++. |+. |+.+ +++|++.|++++.++..|.||||+|+..|+.+++++|+++|++++..+..+ +||||+
T Consensus 33 ~~~~~g~t~L~~-A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g-~t~L~~ 109 (162)
T 1ihb_A 33 AQNGFGRTALQV-MKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEG-NLPLHL 109 (162)
T ss_dssp CCCTTSCCHHHH-CCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTS-CCHHHH
T ss_pred ccCccCccHHHH-HHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCC-CCHHHH
Confidence 344557777744 555 8888 888888888888888888888888888888888888888888888877777 788888
Q ss_pred HHHcCCHHHHHHHHhcCCC-CCccCCCCCcHHHHHHhcCcHHHHHHHHHhCCc
Q psy3338 95 AASAANEEIVTLLLDNGAD-STLKDSDGLTALDRSRKESHEKISQILLERFSD 146 (152)
Q Consensus 95 a~~~~~~~~~~~Ll~~g~~-~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~~ 146 (152)
|+..|+.+++++|++.|.+ ++..+..|.||+++|+..++.+++++|+++|++
T Consensus 110 A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 110 AAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGAG 162 (162)
T ss_dssp HHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC--
T ss_pred HHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCC
Confidence 8888888888888888876 577888888888888888888888888888874
No 13
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.96 E-value=2e-28 Score=155.67 Aligned_cols=130 Identities=28% Similarity=0.279 Sum_probs=111.1
Q ss_pred cCCCChhHHHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHH
Q psy3338 18 ILPEHIPLTIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAA 96 (152)
Q Consensus 18 ~~~~~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~ 96 (152)
...+.||+ ++|+..|+.+ +++|++.|.+++.++..|.||||+|+..|+.+++++|+++|++++..+..+ +||||+|+
T Consensus 32 d~~g~t~L-~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g-~t~L~~A~ 109 (192)
T 2rfm_A 32 DSYNRTPL-MVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSG-KTPLMWSI 109 (192)
T ss_dssp CTTCCCHH-HHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTS-CCHHHHHH
T ss_pred CCCCCCHH-HHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCC-CcHHHHHH
Confidence 34567777 5577888888 888888888888888888999999999999999999998888888888777 78999999
Q ss_pred HcCCHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHhCCcccc
Q psy3338 97 SAANEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKISQILLERFSDLQT 149 (152)
Q Consensus 97 ~~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~~~~~ 149 (152)
..++.+++++|++.|++++.++..|.|||++|+..++.+++++|+++|++++.
T Consensus 110 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~ 162 (192)
T 2rfm_A 110 IFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISA 162 (192)
T ss_dssp HHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTC
T ss_pred HcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC
Confidence 98999999999888888888888889999999998889999999988888763
No 14
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.96 E-value=3.5e-28 Score=151.75 Aligned_cols=127 Identities=35% Similarity=0.379 Sum_probs=118.3
Q ss_pred cccCCCChhHHHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHH
Q psy3338 16 KPILPEHIPLTIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHR 94 (152)
Q Consensus 16 ~~~~~~~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~ 94 (152)
.....+.+|+ +.|+..|+.+ +++|++.|++++.+|..|.||||+|+..|+.+++++|+++|++++..+..+ .||||+
T Consensus 42 ~~~~~g~t~L-~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g-~t~L~~ 119 (169)
T 2y1l_E 42 AEDASGWTPL-HLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEG-HTPLHL 119 (169)
T ss_dssp CCCTTSCCHH-HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTS-CCHHHH
T ss_pred CCCCCCCCHH-HHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCC-CCHHHH
Confidence 3445677777 6688999999 999999999999999999999999999999999999999999999988888 899999
Q ss_pred HHHcCCHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHhC
Q psy3338 95 AASAANEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKISQILLERF 144 (152)
Q Consensus 95 a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~ 144 (152)
|+..++.+++++|++.|++++.++..|.||+++|+..++.+++++|+++|
T Consensus 120 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 120 AAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred HHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999876
No 15
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.96 E-value=1.6e-28 Score=154.59 Aligned_cols=132 Identities=23% Similarity=0.248 Sum_probs=118.1
Q ss_pred cccCCCChhHHHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHH
Q psy3338 16 KPILPEHIPLTIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHR 94 (152)
Q Consensus 16 ~~~~~~~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~ 94 (152)
.....+.||+ ++|+..|+.+ +++|++.|++++.++..|.||||+|+..|+.+++++|+++|++++..+..+ .||||+
T Consensus 34 ~~~~~g~t~L-~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g-~t~L~~ 111 (179)
T 3f6q_A 34 QGDDHGFSPL-HWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHG-NVPLHY 111 (179)
T ss_dssp CCCTTSCCHH-HHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTS-CCHHHH
T ss_pred ccCCCCCCHH-HHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCC-CCHHHH
Confidence 3445577777 5688899999 999999999999999999999999999999999999999999999888877 899999
Q ss_pred HHHcCCHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHhCCcccc
Q psy3338 95 AASAANEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKISQILLERFSDLQT 149 (152)
Q Consensus 95 a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~~~~~ 149 (152)
|+..++.+++++|++.|++++.++..|.||+++|+..++.+++++|+++|++++.
T Consensus 112 A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~g~~~~~ 166 (179)
T 3f6q_A 112 ACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRERAEKMGQNLNR 166 (179)
T ss_dssp HHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHHHHHHHHHHHHHTTCCCSC
T ss_pred HHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHHHHHHHHHHHHHHHHhhcCccc
Confidence 9999999999999999999999999999999999999999999999999998874
No 16
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.95 E-value=4.3e-28 Score=149.05 Aligned_cols=121 Identities=29% Similarity=0.343 Sum_probs=93.8
Q ss_pred cCCCChhHHHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHH
Q psy3338 18 ILPEHIPLTIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAA 96 (152)
Q Consensus 18 ~~~~~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~ 96 (152)
...+.||+ ++|+..|+.+ +++|++.|++++.++..|.||||+|+..|+.+++++|+++|++++..+..+ +||+|+|+
T Consensus 31 ~~~g~t~L-~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g-~t~L~~A~ 108 (153)
T 1awc_B 31 DWLGTSPL-HLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLK-MTALHWAT 108 (153)
T ss_dssp CTTCCCHH-HHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTS-CCHHHHHH
T ss_pred CCCCCCHH-HHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHHcCCCCCCCCCCC-CCHHHHHH
Confidence 44466666 5567777777 778888888888777778888888888888888888888888777777666 78888888
Q ss_pred HcCCHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHH
Q psy3338 97 SAANEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKISQIL 140 (152)
Q Consensus 97 ~~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L 140 (152)
..++.+++++|++.|++++.++..|.||+++|+..|+.+++++|
T Consensus 109 ~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 109 EHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 88888888888888888777777888888888888888877776
No 17
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.95 E-value=2.4e-28 Score=151.81 Aligned_cols=122 Identities=32% Similarity=0.385 Sum_probs=81.2
Q ss_pred CChhHHHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHHHcC
Q psy3338 21 EHIPLTIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAASAA 99 (152)
Q Consensus 21 ~~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~~~ 99 (152)
+.||+ ++|+..|+.+ +++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++..+..+ +||||+|+..+
T Consensus 42 g~t~L-~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g-~t~L~~A~~~~ 119 (165)
T 3twr_A 42 QSTPL-HFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWK-FTPLHEAAAKG 119 (165)
T ss_dssp CCCHH-HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTC-CCHHHHHHHTT
T ss_pred CCCHH-HHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCCCcCCCC-CCHHHHHHHcC
Confidence 44555 4466666666 666777777776666667777777777777777777777776666666655 67777777777
Q ss_pred CHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHhCC
Q psy3338 100 NEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKISQILLERFS 145 (152)
Q Consensus 100 ~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~ 145 (152)
+.+++++|++.|++++.++..|.||+++|.. ++.+++++|+++|+
T Consensus 120 ~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~-~~~~i~~~L~~~gA 164 (165)
T 3twr_A 120 KYEICKLLLQHGADPTKKNRDGNTPLDLVKD-GDTDIQDLLRGDAA 164 (165)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT-TCHHHHHHHHTC--
T ss_pred CHHHHHHHHHcCCCCcccCCCCCChhHhHhc-CChHHHHHHhhccc
Confidence 7777777777676666666677777776555 66677777766654
No 18
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.95 E-value=5.5e-28 Score=153.61 Aligned_cols=126 Identities=29% Similarity=0.321 Sum_probs=118.7
Q ss_pred ccCCCChhHHHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHH
Q psy3338 17 PILPEHIPLTIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRA 95 (152)
Q Consensus 17 ~~~~~~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a 95 (152)
....+.||+ ++|+..|+.+ +++|++.|++++.+|..|.||||+|+..|+.+++++|+++|++++..+..+ .||||+|
T Consensus 64 ~~~~g~t~L-~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g-~t~L~~A 141 (192)
T 2rfm_A 64 KDIEGSTAL-IWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEG-ETPLIVA 141 (192)
T ss_dssp CCTTSCCHH-HHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTC-CCHHHHH
T ss_pred ccccCccHH-HHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCC-CCHHHHH
Confidence 345577887 6688999999 999999999999999999999999999999999999999999999998888 8999999
Q ss_pred HHcCCHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHhC
Q psy3338 96 ASAANEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKISQILLERF 144 (152)
Q Consensus 96 ~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~ 144 (152)
+..++.+++++|++.|++++.++..|.||+++|+..++.+++++|+++|
T Consensus 142 ~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 142 SKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQEVIKIFTEVR 190 (192)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCcHHHHHHHHhcc
Confidence 9999999999999999999999999999999999999999999999876
No 19
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.95 E-value=1.4e-28 Score=160.57 Aligned_cols=123 Identities=32% Similarity=0.359 Sum_probs=116.8
Q ss_pred HHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHHHcCCHHHH
Q psy3338 26 TIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAASAANEEIV 104 (152)
Q Consensus 26 ~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~ 104 (152)
++.|+..|+.+ +++|++.|++++.+|..|.||||+|+..|+.+++++|+++|++++..+..+ +||||+|+..|+.+++
T Consensus 25 L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~d~~g-~tpLh~A~~~g~~~~v 103 (229)
T 2vge_A 25 LLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVNSPDSHG-WTPLHCAASCNDTVIC 103 (229)
T ss_dssp HHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTC-CCHHHHHHHTTCHHHH
T ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCC-CCHHHHHHHcCCHHHH
Confidence 57799999999 999999999999999999999999999999999999999999999999888 8999999999999999
Q ss_pred HHHHhcCCCCCccC-CCCCcHHHHH--HhcCcHHHHHHHHHhCCcccc
Q psy3338 105 TLLLDNGADSTLKD-SDGLTALDRS--RKESHEKISQILLERFSDLQT 149 (152)
Q Consensus 105 ~~Ll~~g~~~~~~~-~~~~~~l~~a--~~~~~~~i~~~L~~~~~~~~~ 149 (152)
++|++.|++++..+ ..|.|||++| +..++.+++++|+++|++++.
T Consensus 104 ~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~ 151 (229)
T 2vge_A 104 MALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGL 151 (229)
T ss_dssp HHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTT
T ss_pred HHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCccc
Confidence 99999999999886 6999999999 999999999999999988763
No 20
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.95 E-value=1.6e-27 Score=146.48 Aligned_cols=124 Identities=29% Similarity=0.359 Sum_probs=116.1
Q ss_pred hhHHHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHHHcCCH
Q psy3338 23 IPLTIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAASAANE 101 (152)
Q Consensus 23 ~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~~~~~ 101 (152)
+++ +.|+..|+.+ +++|++.|.+++ .+..|.||||+|+..|+.+++++|+++|++++..+..+ +||||+|+..++.
T Consensus 4 ~~L-~~A~~~g~~~~v~~Ll~~g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g-~t~L~~A~~~~~~ 80 (153)
T 1awc_B 4 KKL-LEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVD-RTPLHMAASEGHA 80 (153)
T ss_dssp HHH-HHHHHHTCHHHHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTC-CCHHHHHHHHTCH
T ss_pred HHH-HHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCC-CCHHHHHHHcChH
Confidence 444 6799999999 999999999886 58889999999999999999999999999999888888 8999999999999
Q ss_pred HHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHhCCcccc
Q psy3338 102 EIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKISQILLERFSDLQT 149 (152)
Q Consensus 102 ~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~~~~~ 149 (152)
+++++|++.|++++.++..|.|||++|+..++.+++++|+++|++++.
T Consensus 81 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~ 128 (153)
T 1awc_B 81 NIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHT 128 (153)
T ss_dssp HHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccc
Confidence 999999999999999999999999999999999999999999998863
No 21
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.95 E-value=1.8e-27 Score=147.39 Aligned_cols=124 Identities=27% Similarity=0.285 Sum_probs=117.0
Q ss_pred CChhHHHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHHHcC
Q psy3338 21 EHIPLTIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAASAA 99 (152)
Q Consensus 21 ~~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~~~ 99 (152)
..+|+ +.|+..|+.+ +++|++.|.+++.++..|.||||+|+. |+.+++++|+++|++++..+..+ +||||+|+..+
T Consensus 5 ~~~~L-~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g-~t~L~~A~~~~ 81 (162)
T 1ihb_A 5 WGNEL-ASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTG-FAVIHDAARAG 81 (162)
T ss_dssp CHHHH-HHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTS-CCHHHHHHHHT
T ss_pred HhhHH-HHHHHcCCHHHHHHHHhCCCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCC-CCHHHHHHHcC
Confidence 34555 7799999999 999999999999999999999999999 99999999999999999988888 89999999999
Q ss_pred CHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHhCCcc
Q psy3338 100 NEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKISQILLERFSDL 147 (152)
Q Consensus 100 ~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~~~ 147 (152)
+.+++++|++.|++++.++..|.|||++|+..++.+++++|+++|++.
T Consensus 82 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 129 (162)
T 1ihb_A 82 FLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASN 129 (162)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCC
T ss_pred CHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCC
Confidence 999999999999999999999999999999999999999999999874
No 22
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.95 E-value=1.1e-27 Score=149.68 Aligned_cols=126 Identities=25% Similarity=0.318 Sum_probs=117.6
Q ss_pred ChhHHHHHHHcCCCC-CCCcCCCCCC-CCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHHHcC
Q psy3338 22 HIPLTIILLTTGRYP-PGHLPICSVD-PNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAASAA 99 (152)
Q Consensus 22 ~~~~~~~a~~~g~~~-v~~Ll~~~~~-~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~~~ 99 (152)
.+|+ +.|+..|+.+ +++|++.+.+ ++.++..|.||||+|+..|+.+++++|+++|++++..+..+ .||||+|+..+
T Consensus 3 ~~~L-~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g-~t~L~~A~~~~ 80 (172)
T 3v30_A 3 SLSI-HQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKER-ESALSLASTGG 80 (172)
T ss_dssp -CCH-HHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTC-CCHHHHHHHTT
T ss_pred hhhH-HHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccC-CCHHHHHHHCC
Confidence 4555 6688999999 9999998877 88899999999999999999999999999999999988888 89999999999
Q ss_pred CHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHhCCcccc
Q psy3338 100 NEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKISQILLERFSDLQT 149 (152)
Q Consensus 100 ~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~~~~~ 149 (152)
+.+++++|++.|++++.++..|.||||+|+..++.+++++|+++|++++.
T Consensus 81 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~ 130 (172)
T 3v30_A 81 YTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTT 130 (172)
T ss_dssp CHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred CHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccc
Confidence 99999999999999999999999999999999999999999999998864
No 23
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.95 E-value=1.9e-27 Score=149.60 Aligned_cols=127 Identities=25% Similarity=0.296 Sum_probs=117.7
Q ss_pred CChhHHHHHHHcCCCC-CCCcCCC-CCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHHHc
Q psy3338 21 EHIPLTIILLTTGRYP-PGHLPIC-SVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAASA 98 (152)
Q Consensus 21 ~~~~~~~~a~~~g~~~-v~~Ll~~-~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~~ 98 (152)
+.+++ +.|+..|+.+ +++|++. +.+++.++..|.||||+|+..|+.+++++|+++|++++..+..+ +||||+|+..
T Consensus 5 ~~~~l-~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g-~t~L~~A~~~ 82 (179)
T 3f6q_A 5 FMDDI-FTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGD-DTPLHLAASH 82 (179)
T ss_dssp --CCH-HHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTC-CCHHHHHHHT
T ss_pred HHHHH-HHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCC-CCHHHHHHHc
Confidence 34455 6799999999 9999987 67899999999999999999999999999999999999998888 8999999999
Q ss_pred CCHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHhCCcccc
Q psy3338 99 ANEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKISQILLERFSDLQT 149 (152)
Q Consensus 99 ~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~~~~~ 149 (152)
++.+++++|++.|++++..+..|.|||++|+..++.+++++|+++|++++.
T Consensus 83 ~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~ 133 (179)
T 3f6q_A 83 GHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSI 133 (179)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSB
T ss_pred CCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcch
Confidence 999999999999999999999999999999999999999999999998863
No 24
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.95 E-value=4.8e-27 Score=152.95 Aligned_cols=129 Identities=29% Similarity=0.366 Sum_probs=94.3
Q ss_pred cCCCChhHHHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHH
Q psy3338 18 ILPEHIPLTIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAA 96 (152)
Q Consensus 18 ~~~~~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~ 96 (152)
...+.||+ ++|+..|+.+ +++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++..+..+ .||+|+|+
T Consensus 70 ~~~g~t~L-~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g-~t~L~~A~ 147 (231)
T 3aji_A 70 DDAGWSPL-HIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYD-ATAMHRAA 147 (231)
T ss_dssp CTTSCCHH-HHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTS-CCHHHHHH
T ss_pred CCCCCCHH-HHHHHcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCC-CcHHHHHH
Confidence 34455665 4466667777 777777777777777777777777777777777777777777777666666 67777777
Q ss_pred HcCCHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHhCCccc
Q psy3338 97 SAANEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKISQILLERFSDLQ 148 (152)
Q Consensus 97 ~~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~~~~ 148 (152)
..|+.+++++|++.|++++.++..|.|||++|+..++.+++++|+++|++++
T Consensus 148 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~ 199 (231)
T 3aji_A 148 AKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIY 199 (231)
T ss_dssp HHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSC
T ss_pred HcCCHHHHHHHHhcCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCC
Confidence 7777777777777777777777777777777777777777777777777765
No 25
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.95 E-value=5e-27 Score=156.73 Aligned_cols=103 Identities=26% Similarity=0.310 Sum_probs=88.7
Q ss_pred CCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCcHHH
Q psy3338 47 PNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAASAANEEIVTLLLDNGADSTLKDSDGLTALD 126 (152)
Q Consensus 47 ~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~ 126 (152)
++.++..|.||||+|+..|+.+++++|+++|++++..+...++||||+|+..|+.+++++|++.|++++.++..|.|||+
T Consensus 151 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~ 230 (282)
T 1oy3_D 151 LEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLG 230 (282)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred CCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHHH
Confidence 56667778888888888888888888888888888777552389999999999999999999999999999999999999
Q ss_pred HHHhcCcHHHHHHHHHhCCcccc
Q psy3338 127 RSRKESHEKISQILLERFSDLQT 149 (152)
Q Consensus 127 ~a~~~~~~~i~~~L~~~~~~~~~ 149 (152)
+|+..++.+++++|+++|++++.
T Consensus 231 ~A~~~~~~~~v~~Ll~~ga~~~~ 253 (282)
T 1oy3_D 231 SALLRPNPILARLLRAHGAPEPE 253 (282)
T ss_dssp HHHTSSCHHHHHHHHHTTCCCCC
T ss_pred HHHHcCCcHHHHHHHHcCCCcCc
Confidence 99999999999999999998764
No 26
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.95 E-value=6e-27 Score=151.76 Aligned_cols=131 Identities=27% Similarity=0.278 Sum_probs=96.5
Q ss_pred cCCCChhHHHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHH
Q psy3338 18 ILPEHIPLTIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAA 96 (152)
Q Consensus 18 ~~~~~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~ 96 (152)
...+.+|+ ++|+..|+.+ +++|++.|++++.++..|.||||+|+..|+.+++++|+++|++++..+..+ .||+|+|+
T Consensus 89 ~~~g~t~L-~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g-~t~L~~A~ 166 (223)
T 2f8y_A 89 MHDGTTPL-ILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNRE-ETPLFLAA 166 (223)
T ss_dssp CTTCCCHH-HHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTC-CCHHHHHH
T ss_pred CCCCCcHH-HHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCC-cCHHHHHH
Confidence 34455665 4466777777 777777777777777777777777777777777777777777777777666 67777777
Q ss_pred HcCCHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHhCCccccc
Q psy3338 97 SAANEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKISQILLERFSDLQTN 150 (152)
Q Consensus 97 ~~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~~~~~~ 150 (152)
..++.+++++|++.|++++.++..|.||+++|+..++.+++++|+++|+...+.
T Consensus 167 ~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g~~~~~~ 220 (223)
T 2f8y_A 167 REGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNLVRSPQ 220 (223)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCSSCC-
T ss_pred HcCCHHHHHHHHHcCCCCccccccCCCHHHHHHHhcchHHHHHHHHcCCCcccc
Confidence 777777777777777777777777777777777777777777777777766543
No 27
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.95 E-value=9.8e-27 Score=152.11 Aligned_cols=130 Identities=25% Similarity=0.276 Sum_probs=111.3
Q ss_pred cCCCChhHHHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCC------CCccccCCCcC
Q psy3338 18 ILPEHIPLTIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGAN------VNAVTRAGQAT 90 (152)
Q Consensus 18 ~~~~~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~------~~~~~~~~~~~ 90 (152)
...+.||+ ++|+..|+.+ +++|+++|++++.++..|.||||+|+..|+.+++++|++++.+ .+..+..+ .|
T Consensus 42 ~~~g~t~L-~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g-~t 119 (236)
T 1ikn_D 42 NNLQQTPL-HLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNG-HT 119 (236)
T ss_dssp CTTCCCHH-HHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTC-CC
T ss_pred CCCCCCHH-HHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCC-CC
Confidence 34567777 5688899999 9999999999999999999999999999999999999988765 34455556 89
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCCCccCC-CCCcHHHHHHhcCcHHHHHHHHHhCCcccc
Q psy3338 91 PLHRAASAANEEIVTLLLDNGADSTLKDS-DGLTALDRSRKESHEKISQILLERFSDLQT 149 (152)
Q Consensus 91 ~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~-~~~~~l~~a~~~~~~~i~~~L~~~~~~~~~ 149 (152)
|||+|+..|+.+++++|++.|++++.++. .|.||||+|+..|+.+++++|+++|++++.
T Consensus 120 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~ 179 (236)
T 1ikn_D 120 CLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNR 179 (236)
T ss_dssp HHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCC
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc
Confidence 99999999999999999999999888887 899999999999999999999999888763
No 28
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.95 E-value=3e-27 Score=145.56 Aligned_cols=124 Identities=25% Similarity=0.357 Sum_probs=113.2
Q ss_pred cccCCCChhHHHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHH
Q psy3338 16 KPILPEHIPLTIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHR 94 (152)
Q Consensus 16 ~~~~~~~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~ 94 (152)
.....+.||++. +..|+.+ +++|++.|++++.+|..|.||||+|+..|+.+++++|+++|++++..+..+ +||||+
T Consensus 31 ~~~~~g~t~L~~--~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g-~t~L~~ 107 (156)
T 1bd8_A 31 ALNRFGKTALQV--MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTG-ALPIHL 107 (156)
T ss_dssp CCCTTSCCHHHH--SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTS-CCHHHH
T ss_pred ccCCCCCcHHHH--HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCC-CcHHHH
Confidence 345568888866 7789999 999999999999999999999999999999999999999999999888887 899999
Q ss_pred HHHcCCHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHh
Q psy3338 95 AASAANEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKISQILLER 143 (152)
Q Consensus 95 a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~ 143 (152)
|+..|+.+++++|++. .+++.++..|.||+++|+..|+.+++++|+++
T Consensus 108 A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 108 AVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp HHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred HHHhChHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 9999999999999988 88999999999999999999999999999875
No 29
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.95 E-value=6e-27 Score=145.48 Aligned_cols=127 Identities=27% Similarity=0.325 Sum_probs=117.4
Q ss_pred CChhHHHHHHHcCCCC-CCCcCC-CCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHHHc
Q psy3338 21 EHIPLTIILLTTGRYP-PGHLPI-CSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAASA 98 (152)
Q Consensus 21 ~~~~~~~~a~~~g~~~-v~~Ll~-~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~~ 98 (152)
+.+|+ +.|+..|+.+ +++|++ .+.+++..+..|.||||+|+..|+.+++++|+++|++++..+..+ +||||+|+..
T Consensus 8 ~~~~l-~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g-~t~L~~A~~~ 85 (165)
T 3twr_A 8 ADRQL-LEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGG-LVPLHNACSY 85 (165)
T ss_dssp HHHHH-HHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTS-CCHHHHHHHT
T ss_pred hhHHH-HHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCC-CCHHHHHHHc
Confidence 44555 6789999999 999987 566788888899999999999999999999999999999999888 8999999999
Q ss_pred CCHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHhCCcccc
Q psy3338 99 ANEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKISQILLERFSDLQT 149 (152)
Q Consensus 99 ~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~~~~~ 149 (152)
++.+++++|++.|++++.++..|.|||++|+..++.+++++|+++|++++.
T Consensus 86 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~ 136 (165)
T 3twr_A 86 GHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTK 136 (165)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred CcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcc
Confidence 999999999999999999999999999999999999999999999998763
No 30
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.94 E-value=6.5e-27 Score=154.54 Aligned_cols=110 Identities=28% Similarity=0.310 Sum_probs=43.9
Q ss_pred HcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHHHcCCHHHHHHHHh
Q psy3338 31 TTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAASAANEEIVTLLLD 109 (152)
Q Consensus 31 ~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~ 109 (152)
..|+.+ +++|++.|++++.+|..|.||||+|+..|+.+++++|+++|++++..+..+ .||||+|+..|+.+++++|++
T Consensus 133 ~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g-~tpL~~A~~~~~~~~v~~Ll~ 211 (253)
T 1yyh_A 133 RLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNRE-ETPLFLAAREGSYETAKVLLD 211 (253)
T ss_dssp HHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTS-CCHHHHHHHHTCHHHHHHHHH
T ss_pred HcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCC-CCHHHHHHHCCCHHHHHHHHH
Confidence 333333 333444444444333334444444444444444444444444333333333 344444444444444444444
Q ss_pred cCCCCCccCCCCCcHHHHHHhcCcHHHHHHHH
Q psy3338 110 NGADSTLKDSDGLTALDRSRKESHEKISQILL 141 (152)
Q Consensus 110 ~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~ 141 (152)
.|++++.++..|.||+++|+..|+.+|+++|.
T Consensus 212 ~ga~~~~~d~~g~tpl~~A~~~g~~~i~~~l~ 243 (253)
T 1yyh_A 212 HFANRDITDHMDRLPRDIAQERMHHDIVRLLD 243 (253)
T ss_dssp TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHH
T ss_pred cCCCccccccCCCCHHHHHHHcCCHHHHHHHH
Confidence 44443333334444444444444444444433
No 31
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.94 E-value=4.5e-28 Score=146.40 Aligned_cols=129 Identities=29% Similarity=0.331 Sum_probs=114.8
Q ss_pred cccCCCChhHHHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHH
Q psy3338 16 KPILPEHIPLTIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHR 94 (152)
Q Consensus 16 ~~~~~~~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~ 94 (152)
.....|.||+ ++|+..|+.+ +++|++.|++++.+|..|.||||+|+..|+.+++++|+++|++++..+..+ +||||+
T Consensus 5 ~~~~~g~t~L-~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g-~t~L~~ 82 (137)
T 3c5r_A 5 FTNHRGETLL-HIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQN-DSPLHD 82 (137)
T ss_dssp CCCTTCCCHH-HHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGG-CCHHHH
T ss_pred CcCCCCCCHH-HHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCC-CCHHHH
Confidence 3445678888 5688899999 999999999999999999999999999999999999999999999988888 899999
Q ss_pred HHHcCCHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHhCCc
Q psy3338 95 AASAANEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKISQILLERFSD 146 (152)
Q Consensus 95 a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~~ 146 (152)
|+..++.+++++|++.|++++.++..|.||+++|+..+..+++.+|.+.+..
T Consensus 83 A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~~s 134 (137)
T 3c5r_A 83 AAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNESS 134 (137)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC------
T ss_pred HHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhhccccccC
Confidence 9999999999999999999999999999999999999999999888876544
No 32
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.94 E-value=6.4e-27 Score=152.52 Aligned_cols=128 Identities=23% Similarity=0.279 Sum_probs=113.7
Q ss_pred CCChhHHHHHHHcCCCC-CCCcCCC-CCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCC-----CccccCCCcCHH
Q psy3338 20 PEHIPLTIILLTTGRYP-PGHLPIC-SVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANV-----NAVTRAGQATPL 92 (152)
Q Consensus 20 ~~~~~~~~~a~~~g~~~-v~~Ll~~-~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~-----~~~~~~~~~~~l 92 (152)
.|.||+ +.|+..|+.+ +++|++. |++++.+|..|.||||+|+..|+.+++++|+++++++ +..+..+ +|||
T Consensus 2 ~g~t~L-~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g-~t~L 79 (232)
T 2rfa_A 2 IWESPL-LLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEG-QTAL 79 (232)
T ss_dssp CTTCHH-HHHHHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTT-CCHH
T ss_pred CCCCHH-HHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCC-cCHH
Confidence 366777 6688999999 9999987 9999999999999999999999999999999998876 4455566 8999
Q ss_pred HHHHHcCCHHHHHHHHhcCCCCCccCC-------------CCCcHHHHHHhcCcHHHHHHHHHhCCcccc
Q psy3338 93 HRAASAANEEIVTLLLDNGADSTLKDS-------------DGLTALDRSRKESHEKISQILLERFSDLQT 149 (152)
Q Consensus 93 ~~a~~~~~~~~~~~Ll~~g~~~~~~~~-------------~~~~~l~~a~~~~~~~i~~~L~~~~~~~~~ 149 (152)
|+|+..|+.+++++|++.|++++..+. .|.||||+|+..|+.+++++|+++|++++.
T Consensus 80 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~ 149 (232)
T 2rfa_A 80 HIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRA 149 (232)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC
Confidence 999999999999999999999887765 799999999999999999999999998763
No 33
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.94 E-value=1.8e-26 Score=152.41 Aligned_cols=134 Identities=25% Similarity=0.254 Sum_probs=123.5
Q ss_pred CccccCCCChhHHHHHHHcCCCC-CCCcCCCCC-CCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCH
Q psy3338 14 TCKPILPEHIPLTIILLTTGRYP-PGHLPICSV-DPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATP 91 (152)
Q Consensus 14 ~~~~~~~~~~~~~~~a~~~g~~~-v~~Ll~~~~-~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~ 91 (152)
.......+.||+ ++|+..|+.+ +++|++.+. +++.++..|.||||+|+..|+.+++++|+++|++++..+..+ +||
T Consensus 83 ~~~~~~~g~t~L-~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g-~t~ 160 (253)
T 1yyh_A 83 ANIQDNMGRTPL-HAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLG-KSA 160 (253)
T ss_dssp TTCCCTTSCCHH-HHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTS-CBH
T ss_pred CCCCCCCCCCHH-HHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCC-CCH
Confidence 333455677887 5688999999 999999887 899999999999999999999999999999999999999888 899
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHhCCcccc
Q psy3338 92 LHRAASAANEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKISQILLERFSDLQT 149 (152)
Q Consensus 92 l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~~~~~ 149 (152)
||+|+..|+.+++++|++.|++++.++..|.|||++|+..|+.+++++|+++|++++.
T Consensus 161 L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~ 218 (253)
T 1yyh_A 161 LHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDI 218 (253)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccc
Confidence 9999999999999999999999999999999999999999999999999999998863
No 34
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.94 E-value=1.4e-26 Score=150.36 Aligned_cols=130 Identities=26% Similarity=0.292 Sum_probs=117.1
Q ss_pred cCCCChhHHHHHHHcCCCC-CCCcCCCC--CCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHH
Q psy3338 18 ILPEHIPLTIILLTTGRYP-PGHLPICS--VDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHR 94 (152)
Q Consensus 18 ~~~~~~~~~~~a~~~g~~~-v~~Ll~~~--~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~ 94 (152)
...+.+|+ ++|+..|+.+ +++|+++| .+++..+..|.||||+|+..|+.+++++|+++|++++..+..+ +||||+
T Consensus 69 ~~~g~t~L-~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g-~t~L~~ 146 (228)
T 2dzn_A 69 DDSGWTPF-HIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFN-QIPLHR 146 (228)
T ss_dssp CTTSCCHH-HHHHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTS-CCHHHH
T ss_pred CCCCCCHH-HHHHHcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCC-CCHHHH
Confidence 34567777 5688889999 99999988 8888899999999999999999999999999999999888877 899999
Q ss_pred HHHcCCHHHHHHHHhcC-CCCCccCCCCCcHHHHHHhcCcHHHHHHHH-HhCCcccc
Q psy3338 95 AASAANEEIVTLLLDNG-ADSTLKDSDGLTALDRSRKESHEKISQILL-ERFSDLQT 149 (152)
Q Consensus 95 a~~~~~~~~~~~Ll~~g-~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~-~~~~~~~~ 149 (152)
|+..|+.+++++|++.| .+++.++..|.|||++|+..++.+++++|+ ++|++++.
T Consensus 147 A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~ 203 (228)
T 2dzn_A 147 AASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDL 203 (228)
T ss_dssp HHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCC
T ss_pred HHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCc
Confidence 99999999999999998 899999999999999999999999999999 88998763
No 35
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.94 E-value=9.8e-28 Score=158.85 Aligned_cols=128 Identities=23% Similarity=0.191 Sum_probs=118.2
Q ss_pred CCChhHHHHHHHcCCCC-CCCcCCCCCCCCCCC--------------CCCccHHHHHHHcCCHHHHHHHHh---cCCCCC
Q psy3338 20 PEHIPLTIILLTTGRYP-PGHLPICSVDPNIPD--------------NAGYTALHYAARSNNKPICLLLIS---RGANVN 81 (152)
Q Consensus 20 ~~~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~--------------~~g~~~L~~a~~~g~~~~~~~L~~---~~~~~~ 81 (152)
.+.||+ ++|+..|+.+ +++|+++|++++.++ ..|.||||+|+..|+.+++++|++ +|++++
T Consensus 92 ~g~t~L-~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~ 170 (260)
T 3jxi_A 92 RGQTAL-HIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLR 170 (260)
T ss_dssp ESBCHH-HHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTT
T ss_pred CCCCHH-HHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCc
Confidence 677887 6688999999 999999999999998 689999999999999999999999 999999
Q ss_pred ccccCCCcCHHHHHHHcCC---------HHHHHHHHhcCCCC-------CccCCCCCcHHHHHHhcCcHHHHHHHHHhCC
Q psy3338 82 AVTRAGQATPLHRAASAAN---------EEIVTLLLDNGADS-------TLKDSDGLTALDRSRKESHEKISQILLERFS 145 (152)
Q Consensus 82 ~~~~~~~~~~l~~a~~~~~---------~~~~~~Ll~~g~~~-------~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~ 145 (152)
..+..+ +||||+|+..++ .+++++|++.|+++ +.++..|.|||++|+..|+.+++++|+++|+
T Consensus 171 ~~d~~g-~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~ 249 (260)
T 3jxi_A 171 RQDSRG-NTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIRREI 249 (260)
T ss_dssp CCCTTS-CCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHH
T ss_pred ccCCCC-CcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCCHHHHHHHHHhCC
Confidence 999888 899999998887 68999999999888 6789999999999999999999999999998
Q ss_pred cccc
Q psy3338 146 DLQT 149 (152)
Q Consensus 146 ~~~~ 149 (152)
+..+
T Consensus 250 ~~~~ 253 (260)
T 3jxi_A 250 ADAA 253 (260)
T ss_dssp HHHC
T ss_pred Cccc
Confidence 7653
No 36
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.94 E-value=1.4e-26 Score=155.94 Aligned_cols=134 Identities=30% Similarity=0.358 Sum_probs=116.8
Q ss_pred ccccCCCChhHHHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccC-------
Q psy3338 15 CKPILPEHIPLTIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRA------- 86 (152)
Q Consensus 15 ~~~~~~~~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~------- 86 (152)
......|.||+ ++|+..|+.+ +++|++.|++++.+|..|.||||+|+..|+.+++++|+++|++++..+..
T Consensus 67 ~~~~~~g~t~L-~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~ 145 (299)
T 1s70_B 67 NYANVDGLTAL-HQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDI 145 (299)
T ss_dssp TCBCTTCCBHH-HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred cccCCCCCCHH-HHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHH
Confidence 33445677887 5688999999 99999999999999999999999999999999999999998877654321
Q ss_pred ----------------------------------------------------CCcCHHHHHHHcCCHHHHHHHHhcCCCC
Q psy3338 87 ----------------------------------------------------GQATPLHRAASAANEEIVTLLLDNGADS 114 (152)
Q Consensus 87 ----------------------------------------------------~~~~~l~~a~~~~~~~~~~~Ll~~g~~~ 114 (152)
.+.||||+|+..|+.+++++|++.|+++
T Consensus 146 A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~ 225 (299)
T 1s70_B 146 AEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDV 225 (299)
T ss_dssp CCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCT
T ss_pred HHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCC
Confidence 1368999999999999999999999999
Q ss_pred CccCCCCCcHHHHHHhcCcHHHHHHHHHhCCcccc
Q psy3338 115 TLKDSDGLTALDRSRKESHEKISQILLERFSDLQT 149 (152)
Q Consensus 115 ~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~~~~~ 149 (152)
+.++..|.||||+|+..|+.+++++|+++|++++.
T Consensus 226 ~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~ 260 (299)
T 1s70_B 226 NIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEA 260 (299)
T ss_dssp TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred CCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCC
Confidence 99999999999999999999999999999998763
No 37
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.94 E-value=2e-26 Score=152.83 Aligned_cols=132 Identities=23% Similarity=0.131 Sum_probs=108.8
Q ss_pred ccccCCCChhHHHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHH
Q psy3338 15 CKPILPEHIPLTIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLH 93 (152)
Q Consensus 15 ~~~~~~~~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~ 93 (152)
......+.||+ ++|+..|+.+ +++|++.|++++.+|..|.||||+|+..|+.+++++|+++|++++..+ .+ .||+|
T Consensus 30 ~~~~~~g~t~L-~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~g-~t~L~ 106 (261)
T 2xai_A 30 NIITADHVSPL-HEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPES-DL-ASPIH 106 (261)
T ss_dssp SCCCTTCCCHH-HHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCSC-TT-CCHHH
T ss_pred CCcCCCCCCHH-HHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCC-CC-CCHHH
Confidence 33445677777 5577888888 889998899999888889999999999999999999998888887433 34 78888
Q ss_pred HHHHcCCHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHhCCcccc
Q psy3338 94 RAASAANEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKISQILLERFSDLQT 149 (152)
Q Consensus 94 ~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~~~~~ 149 (152)
+|+..|+.+++++|++.|.+++..+..|.|||++|+..++.+++++|+++|++++.
T Consensus 107 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~ 162 (261)
T 2xai_A 107 EAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ 162 (261)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTTC
T ss_pred HHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCC
Confidence 88888888888888888888888888888888888888888888888888887753
No 38
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.94 E-value=1.8e-26 Score=147.31 Aligned_cols=132 Identities=22% Similarity=0.262 Sum_probs=116.8
Q ss_pred cccCCCChhHHHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHH-hcCCCCCccccCCCcCHHH
Q psy3338 16 KPILPEHIPLTIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLI-SRGANVNAVTRAGQATPLH 93 (152)
Q Consensus 16 ~~~~~~~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~-~~~~~~~~~~~~~~~~~l~ 93 (152)
.....+.||+ ++|+..|+.+ +++|+++|++++.++..|.||||+|+..|+.+++++|+ ..+.+++..+..+ .||||
T Consensus 34 ~~~~~g~t~L-~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g-~t~L~ 111 (201)
T 3hra_A 34 EVDTEGNTPL-NIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYG-GNALI 111 (201)
T ss_dssp CCCTTSCCHH-HHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTS-CCSHH
T ss_pred CCCCCCCCHH-HHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCC-CcHHH
Confidence 3445677777 6688999999 99999999999999999999999999999999999999 6667888888777 89999
Q ss_pred HHHHcCCHHHHHHHHhcC-CCCCccCCCCCcHHHHHHhcCc-----HHHHHHHHHhCCcccc
Q psy3338 94 RAASAANEEIVTLLLDNG-ADSTLKDSDGLTALDRSRKESH-----EKISQILLERFSDLQT 149 (152)
Q Consensus 94 ~a~~~~~~~~~~~Ll~~g-~~~~~~~~~~~~~l~~a~~~~~-----~~i~~~L~~~~~~~~~ 149 (152)
+|+..++.+++++|++.| .+++.++..|.||||+|+..+. .+++++|+++|++++.
T Consensus 112 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~ 173 (201)
T 3hra_A 112 PAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSI 173 (201)
T ss_dssp HHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTC
T ss_pred HHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCCc
Confidence 999999999999999988 8899999999999999998887 8999999999988863
No 39
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.94 E-value=1.7e-26 Score=153.96 Aligned_cols=129 Identities=26% Similarity=0.316 Sum_probs=102.8
Q ss_pred CCCChhHHHHHHHcCCC-C-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHH
Q psy3338 19 LPEHIPLTIILLTTGRY-P-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAA 96 (152)
Q Consensus 19 ~~~~~~~~~~a~~~g~~-~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~ 96 (152)
..+.+|++. |+..+.. . ++.|++.|++++.+|..|.||||+|+..|+.+++++|++.+++++..+..+ .||+++|+
T Consensus 50 ~~~~t~L~~-a~~~~~~~~~v~~Ll~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g-~t~l~~a~ 127 (269)
T 4b93_B 50 PEFCHPLCQ-CPKCAPAQKRLAKVPASGLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQ-AVPLHLAC 127 (269)
T ss_dssp --------------------------CCCCTTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTC-CCHHHHHH
T ss_pred ccCCCHHHH-HHHhCCHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCC-CCcccccc
Confidence 346677755 4455554 4 899999999999999999999999999999999999999999999888888 89999999
Q ss_pred HcCCHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHhCCcccc
Q psy3338 97 SAANEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKISQILLERFSDLQT 149 (152)
Q Consensus 97 ~~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~~~~~ 149 (152)
..++.+++++|++.|++++.++..|.|||++|+..|+.+++++|+++|++++.
T Consensus 128 ~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~ 180 (269)
T 4b93_B 128 QQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINA 180 (269)
T ss_dssp HHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTC
T ss_pred ccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCc
Confidence 99999999999999999999999999999999999999999999999999874
No 40
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.94 E-value=1.2e-26 Score=153.86 Aligned_cols=127 Identities=23% Similarity=0.251 Sum_probs=117.4
Q ss_pred CCChhHHHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHHHc
Q psy3338 20 PEHIPLTIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAASA 98 (152)
Q Consensus 20 ~~~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~~ 98 (152)
.|.||+ ++|+..|+.+ +++|++.|++++.+|..|.||||+|+..|+.+++++|+++|++++..+..+ +||||+|+..
T Consensus 2 ~g~t~L-~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g-~t~L~~A~~~ 79 (261)
T 2xai_A 2 SDWSPM-HEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADW-HTPLFNACVS 79 (261)
T ss_dssp --CCHH-HHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTS-CCHHHHHHHH
T ss_pred CCCCHH-HHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCC-CCHHHHHHHc
Confidence 467887 6688999999 999999999999999999999999999999999999999999999998888 8999999999
Q ss_pred CCHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHhCCcccc
Q psy3338 99 ANEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKISQILLERFSDLQT 149 (152)
Q Consensus 99 ~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~~~~~ 149 (152)
|+.+++++|++.|++++. +..|.|||++|+..|+.+++++|+++|++++.
T Consensus 80 ~~~~~v~~Ll~~g~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~ 129 (261)
T 2xai_A 80 GSWDCVNLLLQHGASVQP-ESDLASPIHEAARRGHVECVNSLIAYGGNIDH 129 (261)
T ss_dssp TCHHHHHHHHHTTCCSSC-SCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred CCHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCc
Confidence 999999999999999875 45699999999999999999999999998864
No 41
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.94 E-value=1.6e-27 Score=157.57 Aligned_cols=128 Identities=23% Similarity=0.236 Sum_probs=118.7
Q ss_pred CCCChhHHHHHHHcCCCC-CCCcCCCCCCCCCCCCC-------------CccHHHHHHHcCCHHHHHHHHh---cCCCCC
Q psy3338 19 LPEHIPLTIILLTTGRYP-PGHLPICSVDPNIPDNA-------------GYTALHYAARSNNKPICLLLIS---RGANVN 81 (152)
Q Consensus 19 ~~~~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~-------------g~~~L~~a~~~g~~~~~~~L~~---~~~~~~ 81 (152)
..+.||+ ++|+..|+.+ +++|++.|++++.++.. |.||||+|+..|+.+++++|++ +|++++
T Consensus 88 ~~g~t~L-~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n 166 (256)
T 2etb_A 88 YQGHSAL-HIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLE 166 (256)
T ss_dssp TTTCCHH-HHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTT
T ss_pred ccCCCHH-HHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcC
Confidence 4577887 6688999999 99999999999999886 9999999999999999999999 999999
Q ss_pred ccccCCCcCHHHHHHH--cCCHH-------HHHHHHhcCCCC-------CccCCCCCcHHHHHHhcCcHHHHHHHHHhCC
Q psy3338 82 AVTRAGQATPLHRAAS--AANEE-------IVTLLLDNGADS-------TLKDSDGLTALDRSRKESHEKISQILLERFS 145 (152)
Q Consensus 82 ~~~~~~~~~~l~~a~~--~~~~~-------~~~~Ll~~g~~~-------~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~ 145 (152)
..+..+ +||||+|+. .++.+ ++++|++.|+++ +.++..|.|||++|+..|+.+++++|+++|+
T Consensus 167 ~~d~~g-~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~ 245 (256)
T 2etb_A 167 ATDSLG-NTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQREF 245 (256)
T ss_dssp CCCTTS-CCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHH
T ss_pred ccCCCC-CCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHhCCHHHHHHHHhCCC
Confidence 999888 899999999 78888 999999999998 8899999999999999999999999999987
Q ss_pred ccc
Q psy3338 146 DLQ 148 (152)
Q Consensus 146 ~~~ 148 (152)
+..
T Consensus 246 ~~~ 248 (256)
T 2etb_A 246 SGA 248 (256)
T ss_dssp HHH
T ss_pred CCC
Confidence 754
No 42
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.94 E-value=1.7e-26 Score=150.34 Aligned_cols=130 Identities=33% Similarity=0.402 Sum_probs=122.0
Q ss_pred cCCCChhHHHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHH
Q psy3338 18 ILPEHIPLTIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAA 96 (152)
Q Consensus 18 ~~~~~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~ 96 (152)
...+.||+ ++|+..|+.+ +++|++.|++++.+|..|.||||+|+..|+.+++++|+++|++++..+..+ .||||+|+
T Consensus 37 ~~~g~t~L-~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g-~t~L~~A~ 114 (231)
T 3aji_A 37 DQDSRTAL-HWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNG-CTPLHYAA 114 (231)
T ss_dssp CTTSCCHH-HHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTS-CCHHHHHH
T ss_pred CCCCCCHH-HHHHHcCcHHHHHHHHHhCCCCCCcCCCCCCHHHHHHHcCHHHHHHHHHHcCCCCCCCCCCC-CCHHHHHH
Confidence 45577777 6688999999 999999999999999999999999999999999999999999999888888 89999999
Q ss_pred HcCCHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHhCCcccc
Q psy3338 97 SAANEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKISQILLERFSDLQT 149 (152)
Q Consensus 97 ~~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~~~~~ 149 (152)
..++.+++++|++.|.+++..+..|.|||++|+..|+.+++++|+++|++++.
T Consensus 115 ~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~ 167 (231)
T 3aji_A 115 SKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNI 167 (231)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCC
T ss_pred HcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccc
Confidence 99999999999999999999999999999999999999999999999998764
No 43
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.94 E-value=1.1e-26 Score=152.29 Aligned_cols=126 Identities=29% Similarity=0.362 Sum_probs=108.6
Q ss_pred ChhHHHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHHHcCC
Q psy3338 22 HIPLTIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAASAAN 100 (152)
Q Consensus 22 ~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~~~~ 100 (152)
.+| ++.|+..|+.+ +++|++.|++++.+|..|.||||+|+..|+.+++++|+++|++++..+..+ +||||+|+..|+
T Consensus 38 ~t~-L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g-~tpL~~A~~~~~ 115 (239)
T 1ycs_B 38 LAL-LLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDG-WTPLHCAASCNN 115 (239)
T ss_dssp HHH-HHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTC-CCHHHHHHHTTC
T ss_pred hHH-HHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCC-CCHHHHHHHcCC
Confidence 344 46788888888 899999999999999899999999999999999999999999988888877 899999999999
Q ss_pred HHHHHHHHhcCCCCCccCCCCC-cHHHHH--HhcCcHHHHHHHHHhCCcccc
Q psy3338 101 EEIVTLLLDNGADSTLKDSDGL-TALDRS--RKESHEKISQILLERFSDLQT 149 (152)
Q Consensus 101 ~~~~~~Ll~~g~~~~~~~~~~~-~~l~~a--~~~~~~~i~~~L~~~~~~~~~ 149 (152)
.+++++|++.|++++..+..+. ||+++| +..|+.+++++|+++|++++.
T Consensus 116 ~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a~~~~ 167 (239)
T 1ycs_B 116 VQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMGI 167 (239)
T ss_dssp HHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhccHHHHHHHHHhhhcccc
Confidence 9999999999999888887776 999988 777888999999998887764
No 44
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.94 E-value=3.9e-27 Score=154.51 Aligned_cols=127 Identities=18% Similarity=0.160 Sum_probs=91.9
Q ss_pred CCChhHHHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHHHc
Q psy3338 20 PEHIPLTIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAASA 98 (152)
Q Consensus 20 ~~~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~~ 98 (152)
.|.||+ +.|+..|+.+ ++.|+++|++++.. ..|.||||.|+..|+.+++++|++.|++++..+..+ +||||+|+..
T Consensus 4 ~g~t~L-~~a~~~~~~~~~~~ll~~g~~~~~~-~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g-~t~L~~A~~~ 80 (239)
T 1ycs_B 4 TGQVSL-PPGKRTNLRKTGSERIAHGMRVKFN-PLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEG-ITALHNAVCA 80 (239)
T ss_dssp -----------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTS-CCHHHHHHHH
T ss_pred cccccC-chhhhhhhHHHHHHHhccCCCcccC-chhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCC-CCHHHHHHHc
Confidence 467777 6688889999 99999999999864 678999999999999999999999999999999888 8999999999
Q ss_pred CCHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHhCCcccc
Q psy3338 99 ANEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKISQILLERFSDLQT 149 (152)
Q Consensus 99 ~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~~~~~ 149 (152)
|+.+++++|++.|++++.++..|.||||+|+..|+.+++++|+++|++++.
T Consensus 81 g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~ 131 (239)
T 1ycs_B 81 GHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFA 131 (239)
T ss_dssp TCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred CCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcce
Confidence 999999999999999999999999999999999999999999999999863
No 45
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.94 E-value=3.2e-27 Score=140.22 Aligned_cols=114 Identities=30% Similarity=0.390 Sum_probs=104.1
Q ss_pred CChhHHHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHHHcC
Q psy3338 21 EHIPLTIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAASAA 99 (152)
Q Consensus 21 ~~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~~~ 99 (152)
+.+|+ +.|+..|+.+ +++|++.|.+++.+|..|.||||+|+..|+.+++++|+++|++++..+..+ +||||+|+..+
T Consensus 7 ~~~~l-~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g-~tpL~~A~~~~ 84 (123)
T 3aaa_C 7 CDKEF-MWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHH-ITPLLSAVYEG 84 (123)
T ss_dssp CHHHH-HHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTS-CCHHHHHHHHT
T ss_pred cchHH-HHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCC-CCHHHHHHHcC
Confidence 44565 6799999999 999999999999999999999999999999999999999999999999888 89999999999
Q ss_pred CHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHH
Q psy3338 100 NEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKI 136 (152)
Q Consensus 100 ~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i 136 (152)
+.+++++|++.|++++.++..|.||+++|...+..++
T Consensus 85 ~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~l 121 (123)
T 3aaa_C 85 HVSCVKLLLSKGADKTVKGPDGLTAFEATDNQAIKAL 121 (123)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHCCCHHHHHH
T ss_pred CHHHHHHHHHcCCCCCCcCCCCCCHHHHhCCHHHHHH
Confidence 9999999999999999999999999999965544433
No 46
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.94 E-value=4.5e-26 Score=147.62 Aligned_cols=128 Identities=27% Similarity=0.306 Sum_probs=73.6
Q ss_pred CCCChhHHHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCC-CCCccccCCCcCHHHHHH
Q psy3338 19 LPEHIPLTIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGA-NVNAVTRAGQATPLHRAA 96 (152)
Q Consensus 19 ~~~~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~-~~~~~~~~~~~~~l~~a~ 96 (152)
..+.||+ ++|+..|+.+ +++|++.|++++.++..|.||||+|+..|+.+++++|++++. +++..+..+ .||+|+|+
T Consensus 23 ~~g~t~L-~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g-~t~L~~A~ 100 (223)
T 2f8y_A 23 RTGETAL-HLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDG-TTPLILAA 100 (223)
T ss_dssp TTCCCHH-HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTC-CCHHHHHH
T ss_pred CCCCchH-HHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCC-CcHHHHHH
Confidence 3455554 4456666666 666666666666666666666666666666666666665554 444444444 45555555
Q ss_pred HcCCHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHhCCccc
Q psy3338 97 SAANEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKISQILLERFSDLQ 148 (152)
Q Consensus 97 ~~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~~~~ 148 (152)
..++.+++++|++.|++++..+..|.|||++|+..++.+++++|+++|++++
T Consensus 101 ~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 152 (223)
T 2f8y_A 101 RLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKD 152 (223)
T ss_dssp HHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred HhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 5555555555555555555555555555555555555555555555555443
No 47
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.94 E-value=1.7e-26 Score=150.54 Aligned_cols=128 Identities=29% Similarity=0.262 Sum_probs=68.7
Q ss_pred cCCCChhHHHHHHHcCCCC-CCCcCCCCCCC-----CCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCcccc------
Q psy3338 18 ILPEHIPLTIILLTTGRYP-PGHLPICSVDP-----NIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTR------ 85 (152)
Q Consensus 18 ~~~~~~~~~~~a~~~g~~~-v~~Ll~~~~~~-----~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~------ 85 (152)
...|.||+ ++|+..|+.+ +++|++.|.++ +.+|..|.||||+|+..|+.+++++|+++|++++..+.
T Consensus 34 ~~~g~t~L-~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~ 112 (232)
T 2rfa_A 34 GAMGETAL-HIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHY 112 (232)
T ss_dssp CTTSCCHH-HHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSC
T ss_pred CCCCCCHH-HHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcceee
Confidence 34445554 3355555555 55555555443 44444555555555555555555555555555554432
Q ss_pred -------CCCcCHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHH----HHHHHhCCcc
Q psy3338 86 -------AGQATPLHRAASAANEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKIS----QILLERFSDL 147 (152)
Q Consensus 86 -------~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~----~~L~~~~~~~ 147 (152)
.+ .||||+|+..|+.+++++|++.|++++.++..|.||||+|+..++.+++ ++|+++|++.
T Consensus 113 ~~~~~~~~g-~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~ 184 (232)
T 2rfa_A 113 RPHNLIYYG-EHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGD 184 (232)
T ss_dssp CTTCSCCCC-SSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSC
T ss_pred cccccccCC-CCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCch
Confidence 23 5555555555555555555555555555555555555555555555544 5555555543
No 48
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.94 E-value=4.3e-27 Score=156.88 Aligned_cols=126 Identities=22% Similarity=0.239 Sum_probs=116.7
Q ss_pred CCCChhHHHHHHHcCCCC-CCCcCCCCCCCCCCCC--------------CCccHHHHHHHcCCHHHHHHHHh---cCCCC
Q psy3338 19 LPEHIPLTIILLTTGRYP-PGHLPICSVDPNIPDN--------------AGYTALHYAARSNNKPICLLLIS---RGANV 80 (152)
Q Consensus 19 ~~~~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~--------------~g~~~L~~a~~~g~~~~~~~L~~---~~~~~ 80 (152)
..+.||+ ++|+..|+.+ +++|+++|++++.++. .|.||||+|+..|+.+++++|++ +|+++
T Consensus 99 ~~g~tpL-~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~ 177 (273)
T 2pnn_A 99 YKGQTAL-HIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADI 177 (273)
T ss_dssp TTTCCHH-HHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCT
T ss_pred CCCCCHH-HHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCc
Confidence 4678888 5688999999 9999999999999987 79999999999999999999999 99999
Q ss_pred CccccCCCcCHHHHHHHcCC---------HHHHHHHHhcCCCCC-------ccCCCCCcHHHHHHhcCcHHHHHHHHHhC
Q psy3338 81 NAVTRAGQATPLHRAASAAN---------EEIVTLLLDNGADST-------LKDSDGLTALDRSRKESHEKISQILLERF 144 (152)
Q Consensus 81 ~~~~~~~~~~~l~~a~~~~~---------~~~~~~Ll~~g~~~~-------~~~~~~~~~l~~a~~~~~~~i~~~L~~~~ 144 (152)
+.++..+ +||||+|+..++ .+++++|++.|++++ .++..|.|||++|+..|+.+++++|+++|
T Consensus 178 ~~~d~~g-~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~g 256 (273)
T 2pnn_A 178 SARDSVG-NTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQRE 256 (273)
T ss_dssp TCCCTTS-CCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred eeeCCCC-CcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhChHHHHHHHHHCC
Confidence 9999888 899999999988 799999999998886 48899999999999999999999999999
Q ss_pred Cc
Q psy3338 145 SD 146 (152)
Q Consensus 145 ~~ 146 (152)
+.
T Consensus 257 a~ 258 (273)
T 2pnn_A 257 IH 258 (273)
T ss_dssp TC
T ss_pred CC
Confidence 93
No 49
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.94 E-value=1.2e-26 Score=151.69 Aligned_cols=130 Identities=28% Similarity=0.298 Sum_probs=119.1
Q ss_pred ccCCCChhHHHHHHHcCCCC-CCCcCCCCCC------CCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCcccc-CCC
Q psy3338 17 PILPEHIPLTIILLTTGRYP-PGHLPICSVD------PNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTR-AGQ 88 (152)
Q Consensus 17 ~~~~~~~~~~~~a~~~g~~~-v~~Ll~~~~~------~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~-~~~ 88 (152)
....+.+|+ ++|+..|+.+ +++|++.+.+ ++..+..|.||||+|+..|+.+++++|+++|++++..+. .+
T Consensus 74 ~~~~g~t~L-~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g- 151 (236)
T 1ikn_D 74 RDFRGNTPL-HLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNG- 151 (236)
T ss_dssp CCTTCCCHH-HHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTC-
T ss_pred cCCCCCCHH-HHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCC-
Confidence 445677887 6688999999 9999998876 466778899999999999999999999999999998887 66
Q ss_pred cCHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHhCCccc
Q psy3338 89 ATPLHRAASAANEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKISQILLERFSDLQ 148 (152)
Q Consensus 89 ~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~~~~ 148 (152)
+||||+|+..|+.+++++|++.|++++.++..|.||+++|+..++.+++++|+++|++..
T Consensus 152 ~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~ 211 (236)
T 1ikn_D 152 RTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENL 211 (236)
T ss_dssp CCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGGG
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCCCHHHHHHccCchHHHHHHHHcchhhh
Confidence 899999999999999999999999999999999999999999999999999999999765
No 50
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.94 E-value=6.6e-26 Score=148.10 Aligned_cols=127 Identities=24% Similarity=0.307 Sum_probs=85.5
Q ss_pred CCChhHHHHHHHcCCCC-CCCcCCCC-CCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHHH
Q psy3338 20 PEHIPLTIILLTTGRYP-PGHLPICS-VDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAAS 97 (152)
Q Consensus 20 ~~~~~~~~~a~~~g~~~-v~~Ll~~~-~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~ 97 (152)
.+.+|+ +.|+..|+.+ +++|++.+ .+++..+..|.||||+|+..|+.+++++|+++|++++..+..+ .||+|+|+.
T Consensus 76 ~g~t~L-~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g-~t~L~~A~~ 153 (237)
T 3b7b_A 76 EGSTCL-HLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEE-NICLHWAAF 153 (237)
T ss_dssp TSCCHH-HHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTS-CCHHHHHHH
T ss_pred CCCcHH-HHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCC-CCHHHHHHH
Confidence 344554 4455666666 66666665 5666666666666666666666666666666666666666555 677777777
Q ss_pred cCCHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHhCCccc
Q psy3338 98 AANEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKISQILLERFSDLQ 148 (152)
Q Consensus 98 ~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~~~~ 148 (152)
.|+.+++++|++.|++++..+..|.|||++|+..++.+++++|+++|++++
T Consensus 154 ~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~ 204 (237)
T 3b7b_A 154 SGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVT 204 (237)
T ss_dssp HCCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTT
T ss_pred CCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCC
Confidence 777777777777777777666677777777777777777777777776654
No 51
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.94 E-value=8.1e-27 Score=161.19 Aligned_cols=129 Identities=18% Similarity=0.183 Sum_probs=120.4
Q ss_pred ccCCCChhHHHHHHHcC--CCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCC-----CCccccCCC
Q psy3338 17 PILPEHIPLTIILLTTG--RYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGAN-----VNAVTRAGQ 88 (152)
Q Consensus 17 ~~~~~~~~~~~~a~~~g--~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~-----~~~~~~~~~ 88 (152)
....+.||+ ++|+..| +.+ +++|++.|++++.+|..|.||||+|+..|+.+++++|+++|++ ++..+..+
T Consensus 134 ~~~~g~t~L-~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g- 211 (364)
T 3ljn_A 134 KHCKGQTAL-HWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQG- 211 (364)
T ss_dssp EEESCCCHH-HHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTC-
T ss_pred CCCCCCCHH-HHHHHcCCchHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCC-
Confidence 334578888 5588889 889 9999999999999999999999999999999999999999988 88888888
Q ss_pred cCHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHhCCcc
Q psy3338 89 ATPLHRAASAANEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKISQILLERFSDL 147 (152)
Q Consensus 89 ~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~~~ 147 (152)
+||||+|+..|+.+++++|++.|++++..+..|.|||++|+..|+.+++++|+++|+++
T Consensus 212 ~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~ 270 (364)
T 3ljn_A 212 NSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVF 270 (364)
T ss_dssp CCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTCCHHHHHHHHHHSCHH
T ss_pred CcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHHcCCch
Confidence 89999999999999999999999999999999999999999999999999999998775
No 52
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.94 E-value=8.6e-26 Score=147.54 Aligned_cols=128 Identities=26% Similarity=0.336 Sum_probs=94.4
Q ss_pred CCCChhHHHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcC-CCCCccccCCCcCHHHHHH
Q psy3338 19 LPEHIPLTIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRG-ANVNAVTRAGQATPLHRAA 96 (152)
Q Consensus 19 ~~~~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~-~~~~~~~~~~~~~~l~~a~ 96 (152)
..+.+|+ +.|+..|+.+ +++|++.|++++.++..|.||||+|+..|+.+++++|++++ .+++..+..+ .||+|+|+
T Consensus 42 ~~g~t~L-~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g-~t~L~~A~ 119 (237)
T 3b7b_A 42 EDQRTPL-MEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGG-WTPMIWAT 119 (237)
T ss_dssp TTCCCHH-HHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTS-CCHHHHHH
T ss_pred CCCCCHH-HHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCC-CCHHHHHH
Confidence 4455665 4566777777 77777777777777777777777777777777777777776 5666666656 67777777
Q ss_pred HcCCHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHhCCccc
Q psy3338 97 SAANEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKISQILLERFSDLQ 148 (152)
Q Consensus 97 ~~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~~~~ 148 (152)
..++.+++++|++.|.+++.++..|.|||++|+..|+.+++++|+++|++++
T Consensus 120 ~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~ 171 (237)
T 3b7b_A 120 EYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLH 171 (237)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTT
T ss_pred HcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCC
Confidence 7777777777777777777777777777777777777777777777777765
No 53
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.94 E-value=5.6e-26 Score=152.55 Aligned_cols=129 Identities=22% Similarity=0.241 Sum_probs=73.5
Q ss_pred ccCCCChhHHHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHH
Q psy3338 17 PILPEHIPLTIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRA 95 (152)
Q Consensus 17 ~~~~~~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a 95 (152)
....|.||+ ++|+..|+.+ +++|++.|++++.+|..|.||||+|+..|+.+++++|+++|++++..+..+ +||||+|
T Consensus 55 ~~~~g~t~L-~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g-~t~L~~A 132 (285)
T 3d9h_A 55 DAVSDWSPM-HEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADW-HTPLFNA 132 (285)
T ss_dssp SSCCSCCHH-HHHHHTTCHHHHHHHHHTTCCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTC-CCHHHHH
T ss_pred CCccCCCHH-HHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCC-CCHHHHH
Confidence 344455555 4455666666 666666666666666666666666666666666666666666666555555 5555555
Q ss_pred HHcCCHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHhCCccc
Q psy3338 96 ASAANEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKISQILLERFSDLQ 148 (152)
Q Consensus 96 ~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~~~~ 148 (152)
+..|+.+++++|++.|.+++..+ .|.|||++|+..|+.+++++|+++|++++
T Consensus 133 ~~~~~~~~v~~Ll~~g~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~ 184 (285)
T 3d9h_A 133 CVSGSWDCVNLLLQHGASVQPES-DLASPIHEAARRGHVECVNSLIAYGGNID 184 (285)
T ss_dssp HHHTCHHHHHHHHHTTCCSSCSC-TTSCHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred HHcCHHHHHHHHHHCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCCC
Confidence 55555555555555555544322 35555555555555555555555554443
No 54
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.94 E-value=2e-26 Score=153.78 Aligned_cols=131 Identities=24% Similarity=0.277 Sum_probs=113.7
Q ss_pred ccCCCChhHHHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCC----------------
Q psy3338 17 PILPEHIPLTIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGAN---------------- 79 (152)
Q Consensus 17 ~~~~~~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~---------------- 79 (152)
....|.||+ ++|+..|+.+ +++|+++|++++.++..|.||||+|+..|+.+++++|++++++
T Consensus 41 ~~~~g~t~L-~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~ 119 (282)
T 1oy3_D 41 QNDLGQTAL-HLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDC 119 (282)
T ss_dssp CCTTSCCHH-HHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------
T ss_pred cCCCCCCHH-HHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhccccc
Confidence 345577887 5688899999 9999999999999999999999999999999999999987654
Q ss_pred -------------------------------CCccccCCCcCHHHHHHHcCCHHHHHHHHhcCCCCCccCC-CCCcHHHH
Q psy3338 80 -------------------------------VNAVTRAGQATPLHRAASAANEEIVTLLLDNGADSTLKDS-DGLTALDR 127 (152)
Q Consensus 80 -------------------------------~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~-~~~~~l~~ 127 (152)
++..+..+ .||||+|+..|+.+++++|++.|++++..+. .|.||||+
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~ 198 (282)
T 1oy3_D 120 TPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDG-HTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHL 198 (282)
T ss_dssp ------------------------CCCGGGGTTCCCTTS-CCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHH
T ss_pred CcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCC-cCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHH
Confidence 44455566 8999999999999999999999999988875 49999999
Q ss_pred HHhcCcHHHHHHHHHhCCcccc
Q psy3338 128 SRKESHEKISQILLERFSDLQT 149 (152)
Q Consensus 128 a~~~~~~~i~~~L~~~~~~~~~ 149 (152)
|+..|+.+++++|+++|++++.
T Consensus 199 A~~~~~~~~v~~Ll~~gad~~~ 220 (282)
T 1oy3_D 199 AVEAQAASVLELLLKAGADPTA 220 (282)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTC
T ss_pred HHHcCCHHHHHHHHHcCCCCcc
Confidence 9999999999999999998864
No 55
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.94 E-value=7.6e-26 Score=151.88 Aligned_cols=130 Identities=24% Similarity=0.138 Sum_probs=104.2
Q ss_pred cccCCCChhHHHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHH
Q psy3338 16 KPILPEHIPLTIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHR 94 (152)
Q Consensus 16 ~~~~~~~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~ 94 (152)
.....|.||+ ++|+..|+.+ +++|++.|++++.+|..|.||||+|+..|+.+++++|+++|++++..+. + .||||+
T Consensus 87 ~~~~~g~t~L-~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-g-~t~L~~ 163 (285)
T 3d9h_A 87 IITADHVSPL-HEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESD-L-ASPIHE 163 (285)
T ss_dssp EECTTCCCHH-HHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCSCT-T-SCHHHH
T ss_pred CcCCCCCCHH-HHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCCCC-C-CCHHHH
Confidence 3445677777 5577888888 8888888888888888888888888888888888888888887765443 4 688888
Q ss_pred HHHcCCHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHhCCccc
Q psy3338 95 AASAANEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKISQILLERFSDLQ 148 (152)
Q Consensus 95 a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~~~~ 148 (152)
|+..|+.+++++|++.|.+++.++..|.|||++|+..++.+++++|+++|++++
T Consensus 164 A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~ 217 (285)
T 3d9h_A 164 AARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVN 217 (285)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred HHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCC
Confidence 888888888888888888888888888888888888888888888888887765
No 56
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.94 E-value=3.7e-27 Score=152.95 Aligned_cols=126 Identities=25% Similarity=0.253 Sum_probs=110.4
Q ss_pred CChhHHHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhc-CCCCCccccCCCcCHHHHHHHc
Q psy3338 21 EHIPLTIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISR-GANVNAVTRAGQATPLHRAASA 98 (152)
Q Consensus 21 ~~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~-~~~~~~~~~~~~~~~l~~a~~~ 98 (152)
+.+|+ +.|+..|+.+ +++|++.|++++.+|..|.||||+|+..|+.+++++|+++ |++++..+..+ +||||+|+..
T Consensus 73 g~t~L-~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g-~tpL~~A~~~ 150 (222)
T 3ehr_A 73 IDNPL-HEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLG-DTALHAAAWK 150 (222)
T ss_dssp ESCHH-HHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTS-CCHHHHHHHH
T ss_pred ccccc-ccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCC-CCHHHHHHHc
Confidence 45676 6688999999 9999999999999999999999999999999999999998 99999999888 8999999999
Q ss_pred CCHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHhCCccc
Q psy3338 99 ANEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKISQILLERFSDLQ 148 (152)
Q Consensus 99 ~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~~~~ 148 (152)
|+.+++++|++.|++++.++..|.||+++|+..+..++++.|+.+++...
T Consensus 151 ~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~ 200 (222)
T 3ehr_A 151 GYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRT 200 (222)
T ss_dssp TCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC----------
T ss_pred CCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhhh
Confidence 99999999999999999999999999999999999999999999988765
No 57
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.94 E-value=8.3e-26 Score=147.80 Aligned_cols=127 Identities=24% Similarity=0.297 Sum_probs=81.6
Q ss_pred CCChhHHHHHHHcCCCC-CCCcCCCCC----CCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccc-cCCCcCHHH
Q psy3338 20 PEHIPLTIILLTTGRYP-PGHLPICSV----DPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVT-RAGQATPLH 93 (152)
Q Consensus 20 ~~~~~~~~~a~~~g~~~-v~~Ll~~~~----~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~-~~~~~~~l~ 93 (152)
.+.+|+ ++|+..|+.+ +++|++.+. +++..+..|.||||+|+..|+.+++++|+++|++++..+ ..+ .||+|
T Consensus 78 ~g~t~l-~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g-~t~L~ 155 (241)
T 1k1a_A 78 HGQTAA-HLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSG-RSPLI 155 (241)
T ss_dssp TSCCHH-HHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTC-CCHHH
T ss_pred CCCCHH-HHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCC-CcHHH
Confidence 344444 3455555555 555555554 555555566666666666666666666666666666555 334 67777
Q ss_pred HHHHcCCHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHhCCccc
Q psy3338 94 RAASAANEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKISQILLERFSDLQ 148 (152)
Q Consensus 94 ~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~~~~ 148 (152)
+|+..++.+++++|++.|++++.++..|.|||++|+..++.+++++|+++|++++
T Consensus 156 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~ 210 (241)
T 1k1a_A 156 HAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSS 210 (241)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCC
Confidence 7777777777777777777777777777777777777777777777777776655
No 58
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.93 E-value=7.2e-26 Score=159.71 Aligned_cols=131 Identities=28% Similarity=0.402 Sum_probs=115.6
Q ss_pred ccCCCChhHHHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHH
Q psy3338 17 PILPEHIPLTIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRA 95 (152)
Q Consensus 17 ~~~~~~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a 95 (152)
....+.||+ +.|+..|+.+ +++|++.+++++..+..|.||||+|+..|+.+++++|+++|++++..+..+ +||||+|
T Consensus 241 ~~~~g~t~L-~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g-~t~L~~A 318 (437)
T 1n11_A 241 ESVQGVTPL-HLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMG-YTPLHVA 318 (437)
T ss_dssp CCTTCCCHH-HHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCSSC-CCHHHHH
T ss_pred CCCCCCCHH-HHHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccCCCCCCCC-CCHHHHH
Confidence 344567777 5578888888 899999999999989899999999999999999999999999998888877 8999999
Q ss_pred HHcCCHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHhCCcccc
Q psy3338 96 ASAANEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKISQILLERFSDLQT 149 (152)
Q Consensus 96 ~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~~~~~ 149 (152)
+..|+.+++++|++.|++++.++..|.|||++|+..|+.+++++|+++|++++.
T Consensus 319 ~~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~ 372 (437)
T 1n11_A 319 SHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNE 372 (437)
T ss_dssp HHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCC
T ss_pred HHcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHCChHHHHHHHHHCcCCCCC
Confidence 999999999999999999999999999999999999999999999999988764
No 59
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.93 E-value=2.2e-26 Score=141.62 Aligned_cols=123 Identities=26% Similarity=0.344 Sum_probs=113.9
Q ss_pred ChhHHHHHHHcCCCC-CCCcCCC-CCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHHHcC
Q psy3338 22 HIPLTIILLTTGRYP-PGHLPIC-SVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAASAA 99 (152)
Q Consensus 22 ~~~~~~~a~~~g~~~-v~~Ll~~-~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~~~ 99 (152)
.+|+ +.|+..|+.+ +++|++. +.+++..+..|.||||+ +..|+.+++++|+++|++++..+..+ +||||+|+..|
T Consensus 3 ~~~L-~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g-~t~L~~A~~~~ 79 (156)
T 1bd8_A 3 GDRL-SGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSG-TSPVHDAARTG 79 (156)
T ss_dssp HHHH-HHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTS-CCHHHHHHHTT
T ss_pred chHH-HHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCC-CCHHHHHHHcC
Confidence 3455 6799999999 9999987 45899999999999999 99999999999999999999998888 89999999999
Q ss_pred CHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHhCCccc
Q psy3338 100 NEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKISQILLERFSDLQ 148 (152)
Q Consensus 100 ~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~~~~ 148 (152)
+.+++++|++.|++++.++..|.||||+|+..|+.+++++|+++ ++++
T Consensus 80 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~ 127 (156)
T 1bd8_A 80 FLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLH 127 (156)
T ss_dssp CHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTT
T ss_pred cHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCC
Confidence 99999999999999999999999999999999999999999988 6665
No 60
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.93 E-value=2.5e-25 Score=125.94 Aligned_cols=93 Identities=41% Similarity=0.582 Sum_probs=88.1
Q ss_pred CCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcC
Q psy3338 53 AGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAASAANEEIVTLLLDNGADSTLKDSDGLTALDRSRKES 132 (152)
Q Consensus 53 ~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~ 132 (152)
.|.||||+|+..|+.+++++|+++|++++.++..+ +||||+|+..++.+++++|++.|++++.++..|.|||++|+..+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g-~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~ 79 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNG-RTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNG 79 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTS-CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCC-CCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Confidence 47899999999999999999999999999999888 89999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHhCCc
Q psy3338 133 HEKISQILLERFSD 146 (152)
Q Consensus 133 ~~~i~~~L~~~~~~ 146 (152)
+.+++++|+++|++
T Consensus 80 ~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 80 HLEVVKLLLEAGAY 93 (93)
T ss_dssp CHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHcCCC
Confidence 99999999999975
No 61
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.93 E-value=3e-26 Score=151.45 Aligned_cols=129 Identities=25% Similarity=0.195 Sum_probs=116.3
Q ss_pred ccCCCChhHHHHHHHc---CCCC-CCCcCCCCCCCCC-----------CCCCCccHHHHHHHcCCHHHHHHHHhcCCCCC
Q psy3338 17 PILPEHIPLTIILLTT---GRYP-PGHLPICSVDPNI-----------PDNAGYTALHYAARSNNKPICLLLISRGANVN 81 (152)
Q Consensus 17 ~~~~~~~~~~~~a~~~---g~~~-v~~Ll~~~~~~~~-----------~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~ 81 (152)
....|.||+ ++|+.. |+.+ +++|++.|++++. +|..|.||||+|+..|+.+++++|+++|++++
T Consensus 39 ~d~~g~t~L-~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~ 117 (256)
T 2etb_A 39 EGSTGKTCL-MKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVH 117 (256)
T ss_dssp BTTTTBCHH-HHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred CCCCCCCHH-HHHHHccccchHHHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 456788888 557787 9999 9999999877663 34679999999999999999999999999999
Q ss_pred ccccC-------------CCcCHHHHHHHcCCHHHHHHHHh---cCCCCCccCCCCCcHHHHHHh--cCcHH-------H
Q psy3338 82 AVTRA-------------GQATPLHRAASAANEEIVTLLLD---NGADSTLKDSDGLTALDRSRK--ESHEK-------I 136 (152)
Q Consensus 82 ~~~~~-------------~~~~~l~~a~~~~~~~~~~~Ll~---~g~~~~~~~~~~~~~l~~a~~--~~~~~-------i 136 (152)
..+.. + .||||+|+..|+.+++++|++ .|++++.++..|+||||+|+. .++.+ +
T Consensus 118 ~~~~~~~~~~~~~~~~~~g-~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~i 196 (256)
T 2etb_A 118 LRACGRFFQKHQGTCFYFG-ELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHM 196 (256)
T ss_dssp CCCCSGGGSCCSSSCCCSC-SSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHH
T ss_pred cccccccccccccccccCC-CCHHHHHHHcCCHHHHHHHHhccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHH
Confidence 88875 5 899999999999999999999 999999999999999999999 78888 9
Q ss_pred HHHHHHhCCcc
Q psy3338 137 SQILLERFSDL 147 (152)
Q Consensus 137 ~~~L~~~~~~~ 147 (152)
+++|+++|+++
T Consensus 197 v~~Ll~~ga~~ 207 (256)
T 2etb_A 197 YDGLLQMGARL 207 (256)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHcCCCc
Confidence 99999999988
No 62
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.93 E-value=7.3e-26 Score=144.53 Aligned_cols=128 Identities=27% Similarity=0.311 Sum_probs=117.3
Q ss_pred ccccCCCChhHHHHHHHcCCCC-CCCcC-CCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcC-CCCCccccCCCcCH
Q psy3338 15 CKPILPEHIPLTIILLTTGRYP-PGHLP-ICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRG-ANVNAVTRAGQATP 91 (152)
Q Consensus 15 ~~~~~~~~~~~~~~a~~~g~~~-v~~Ll-~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~-~~~~~~~~~~~~~~ 91 (152)
......+.+|+ ++|+..|+.+ +++|+ ..+.+++..+..|.||||+|+..|+.+++++|++++ .+++..+..+ +||
T Consensus 66 ~~~~~~g~t~l-~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g-~t~ 143 (201)
T 3hra_A 66 NLQNSISDSPY-LYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFG-YTA 143 (201)
T ss_dssp TCCCTTSCCHH-HHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTS-CCH
T ss_pred CCCCCCCCCHH-HHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCC-CCH
Confidence 33445677887 5688999999 99999 667799999999999999999999999999999999 8999888888 899
Q ss_pred HHHHHHcCC-----HHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHhC
Q psy3338 92 LHRAASAAN-----EEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKISQILLERF 144 (152)
Q Consensus 92 l~~a~~~~~-----~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~ 144 (152)
||+|+..+. .+++++|++.|++++.++..|.||+++|+..|+.+++++|+++|
T Consensus 144 L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 144 LIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp HHHHHHSSCCSHHHHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred HHHHHHhccchhhHHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 999999988 89999999999999999999999999999999999999999886
No 63
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.93 E-value=6.9e-26 Score=162.38 Aligned_cols=125 Identities=22% Similarity=0.231 Sum_probs=115.5
Q ss_pred hHHHHHHHcCCCC-CCCcCCCCCCCCCC------CCCCccHHHHHHH---cCCHHHHHHHHhcCCCCCccccCCCcCHHH
Q psy3338 24 PLTIILLTTGRYP-PGHLPICSVDPNIP------DNAGYTALHYAAR---SNNKPICLLLISRGANVNAVTRAGQATPLH 93 (152)
Q Consensus 24 ~~~~~a~~~g~~~-v~~Ll~~~~~~~~~------~~~g~~~L~~a~~---~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~ 93 (152)
..++.|+..|+.+ ++.|++.|++++.. +..|.||||+|+. .|+.+++++|+++|++++..+..+ +||||
T Consensus 134 ~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g-~TpLh 212 (497)
T 3lvq_E 134 QRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADG-NTALH 212 (497)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSS-CCHHH
T ss_pred HHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCC-CcHHH
Confidence 4468899999999 99999999999987 8899999999976 899999999999999999999888 89999
Q ss_pred HHHHcCCHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHhCCcccc
Q psy3338 94 RAASAANEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKISQILLERFSDLQT 149 (152)
Q Consensus 94 ~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~~~~~ 149 (152)
+|+..|+.+++++|++.|++++.+|..|.|||++|+..|+.+++++|+++|++++.
T Consensus 213 ~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~ 268 (497)
T 3lvq_E 213 YAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFA 268 (497)
T ss_dssp HHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC----
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999874
No 64
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.93 E-value=3.6e-26 Score=150.41 Aligned_cols=124 Identities=29% Similarity=0.352 Sum_probs=112.8
Q ss_pred CCChhHHHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccc-cCCCcCHHHHHHH
Q psy3338 20 PEHIPLTIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVT-RAGQATPLHRAAS 97 (152)
Q Consensus 20 ~~~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~-~~~~~~~l~~a~~ 97 (152)
.+.||+ +.|+..|+.+ ++.|++ |.+++.+|..|.||||+|+..|+.+++++|+++|++++..+ ..+ +||||+|+.
T Consensus 44 ~g~t~L-~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g-~t~L~~A~~ 120 (244)
T 3ui2_A 44 EYETPW-WTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGG-LTALHMAAG 120 (244)
T ss_dssp HHHHHH-HHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSC-CCHHHHHHH
T ss_pred CCCCHH-HHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCC-CCHHHHHHH
Confidence 355666 6789999999 999999 99999999999999999999999999999999999999888 445 899999999
Q ss_pred cCCHHHHHHHHhcCCCCCccCCCCCcHHHHHH----------------hcCcHHHHHHHHHhCCc
Q psy3338 98 AANEEIVTLLLDNGADSTLKDSDGLTALDRSR----------------KESHEKISQILLERFSD 146 (152)
Q Consensus 98 ~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~----------------~~~~~~i~~~L~~~~~~ 146 (152)
.|+.+++++|++.|++++.++..|.|||++|+ ..|+.+++++|.+++.+
T Consensus 121 ~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~~l~~a~~~g~~~iv~~L~~~~~~ 185 (244)
T 3ui2_A 121 YVRPEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPMQFGRRIGLEKVINVLEGQVFE 185 (244)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHEE
T ss_pred cCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHhccCCCCHHHHHHHcChHHHHHHHHHhccc
Confidence 99999999999999999999999999998887 66889999999987544
No 65
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.93 E-value=1.7e-26 Score=155.06 Aligned_cols=127 Identities=17% Similarity=0.144 Sum_probs=80.8
Q ss_pred ccCCCChhHHHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHH
Q psy3338 17 PILPEHIPLTIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRA 95 (152)
Q Consensus 17 ~~~~~~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a 95 (152)
....|.||+ ++|+..|+.+ +++|++.|++++.++ |.||||+|+..|+.+++++|+++|++++..+..+ +||||+|
T Consensus 27 ~d~~g~t~L-~~A~~~g~~~~v~~Ll~~g~~~~~~~--g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g-~t~L~~A 102 (285)
T 3kea_A 27 ADVHGHSAS-YYAIADNNVRLVCTLLNAGALKNLLE--NEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKG-NTALYYA 102 (285)
T ss_dssp CCTTSCCHH-HHHHHTTCHHHHHHHHHTTGGGSCCT--TCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTS-CCHHHHH
T ss_pred cCCCCCCHH-HHHHHcCCHHHHHHHHhCCCCCCCCC--CCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCC-CcHHHHH
Confidence 334455555 4456666666 666666666666553 5666666666666666666666666666666555 6666666
Q ss_pred HHcCCHHHHHHHHhcCCCCCccCCCC-CcHHHHHHhcCcHHHHHHHHHhCCcc
Q psy3338 96 ASAANEEIVTLLLDNGADSTLKDSDG-LTALDRSRKESHEKISQILLERFSDL 147 (152)
Q Consensus 96 ~~~~~~~~~~~Ll~~g~~~~~~~~~~-~~~l~~a~~~~~~~i~~~L~~~~~~~ 147 (152)
+..|+.+++++|++.|++++..+..| .|||++|+..|+.+++++|+++|++.
T Consensus 103 ~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~ 155 (285)
T 3kea_A 103 VDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPST 155 (285)
T ss_dssp HHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTT
T ss_pred HHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCcc
Confidence 66666666666666666666666666 56666666666666666666666554
No 66
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.93 E-value=4.3e-26 Score=143.98 Aligned_cols=109 Identities=30% Similarity=0.358 Sum_probs=100.7
Q ss_pred CCChhHHHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccc-cCCCcCHHHHHHH
Q psy3338 20 PEHIPLTIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVT-RAGQATPLHRAAS 97 (152)
Q Consensus 20 ~~~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~-~~~~~~~l~~a~~ 97 (152)
.+.||+ +.|+..|+.+ ++.|++ |.+++.+|..|.||||+|+..|+.+++++|+++|++++..+ ..+ +||||+|+.
T Consensus 43 ~g~t~L-~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g-~tpL~~A~~ 119 (183)
T 3deo_A 43 EYETPW-WTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGG-LTALHMAAG 119 (183)
T ss_dssp HHHHHH-HHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSS-CCHHHHHHH
T ss_pred CCCCHH-HHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCC-CCHHHHHHh
Confidence 345666 6689999999 999999 99999999999999999999999999999999999999888 555 899999999
Q ss_pred cCCHHHHHHHHhcCCCCCccCCCCCcHHHHHHhc
Q psy3338 98 AANEEIVTLLLDNGADSTLKDSDGLTALDRSRKE 131 (152)
Q Consensus 98 ~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~ 131 (152)
.|+.+++++|++.|++++.++..|.|||++|+..
T Consensus 120 ~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~ 153 (183)
T 3deo_A 120 YVRPEVVEALVELGADIEVEDERGLTALELAREI 153 (183)
T ss_dssp TTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHH
T ss_pred cCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHh
Confidence 9999999999999999999999999999988876
No 67
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.93 E-value=4.7e-27 Score=148.80 Aligned_cols=128 Identities=15% Similarity=0.175 Sum_probs=113.1
Q ss_pred CCCChhHHHHHHHcCCC----C-CCCcCCCCCCCCCCCCCCccHHHHHHHcCC------HHHHHHHHhcCCCCCccccCC
Q psy3338 19 LPEHIPLTIILLTTGRY----P-PGHLPICSVDPNIPDNAGYTALHYAARSNN------KPICLLLISRGANVNAVTRAG 87 (152)
Q Consensus 19 ~~~~~~~~~~a~~~g~~----~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~------~~~~~~L~~~~~~~~~~~~~~ 87 (152)
..|.||+ |+|+.+|+. + +++|+++|+|++.+|..|.||||+|+..|+ .+++++|+++|++++.++..+
T Consensus 36 ~~g~T~L-h~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g 114 (186)
T 3t8k_A 36 VLKSNIL-YDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPY 114 (186)
T ss_dssp HHTTTHH-HHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGG
T ss_pred cCCCCHH-HHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCc
Confidence 4478888 557777764 5 899999999999999999999999999987 578999999999999999888
Q ss_pred Cc-CHHHHHHHcC-----CHHHHHHHHh-cCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHhCCccc
Q psy3338 88 QA-TPLHRAASAA-----NEEIVTLLLD-NGADSTLKDSDGLTALDRSRKESHEKISQILLERFSDLQ 148 (152)
Q Consensus 88 ~~-~~l~~a~~~~-----~~~~~~~Ll~-~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~~~~ 148 (152)
+ ||||+|+..+ ..+++++|++ .|++++.+|..|.|||++|+..++.+++++|.++..+.+
T Consensus 115 -~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~~~~~~ 181 (186)
T 3t8k_A 115 -KIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQKPIALKMMEDYIKKYN 181 (186)
T ss_dssp -TBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHTTTCHHHHHHHHHHHHHHT
T ss_pred -CchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHHHHHHh
Confidence 7 9999999854 3568999999 999999999999999999999999999999998865544
No 68
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.93 E-value=3.1e-25 Score=145.08 Aligned_cols=132 Identities=25% Similarity=0.274 Sum_probs=114.8
Q ss_pred cccCCCChhHHHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCC----CCCccccCCCcC
Q psy3338 16 KPILPEHIPLTIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGA----NVNAVTRAGQAT 90 (152)
Q Consensus 16 ~~~~~~~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~----~~~~~~~~~~~~ 90 (152)
.....+.||+ ++|+..|+.+ +++|++.|++++.++..|.||||+|+..|+.+++++|++.+. +++..+..+ .|
T Consensus 41 ~~~~~g~t~L-~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g-~t 118 (241)
T 1k1a_A 41 IYNNLRQTPL-HLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDG-LT 118 (241)
T ss_dssp CCCTTSCCHH-HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTS-CC
T ss_pred cccccCCCHH-HHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCC-Cc
Confidence 3445577777 5688889999 999999999999999999999999999999999999998876 677777777 89
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCCCccC-CCCCcHHHHHHhcCcHHHHHHHHHhCCcccc
Q psy3338 91 PLHRAASAANEEIVTLLLDNGADSTLKD-SDGLTALDRSRKESHEKISQILLERFSDLQT 149 (152)
Q Consensus 91 ~l~~a~~~~~~~~~~~Ll~~g~~~~~~~-~~~~~~l~~a~~~~~~~i~~~L~~~~~~~~~ 149 (152)
|+|+|+..++.+++++|++.|.+++..+ ..|.|||++|+..++.+++++|+++|++++.
T Consensus 119 ~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~ 178 (241)
T 1k1a_A 119 ALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNA 178 (241)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 9999999999999999999999988887 7899999999999999999999999988764
No 69
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.93 E-value=1.6e-25 Score=145.46 Aligned_cols=130 Identities=25% Similarity=0.287 Sum_probs=117.4
Q ss_pred ccCCCChhHHHHHHHcCCCC-CCCcCCCC--CCCCC-CCCCCccHHHHHHHcCCHHHHHHHHhcC--CCCCccccCCCcC
Q psy3338 17 PILPEHIPLTIILLTTGRYP-PGHLPICS--VDPNI-PDNAGYTALHYAARSNNKPICLLLISRG--ANVNAVTRAGQAT 90 (152)
Q Consensus 17 ~~~~~~~~~~~~a~~~g~~~-v~~Ll~~~--~~~~~-~~~~g~~~L~~a~~~g~~~~~~~L~~~~--~~~~~~~~~~~~~ 90 (152)
....+.||+ ++|+..|+.+ +++|++.| .+++. .+..|.||||+|+..|+.+++++|+++| .+++..+..+ .|
T Consensus 32 ~~~~g~t~L-~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g-~t 109 (228)
T 2dzn_A 32 KDQDGRIPL-HWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQG-VT 109 (228)
T ss_dssp CCTTSCCHH-HHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCTTCCCTTC-CC
T ss_pred CCCCCCCHH-HHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcccccCCcCC-CC
Confidence 455677887 6688999999 99999999 55555 7789999999999999999999999998 8888888777 89
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHhC-Cccc
Q psy3338 91 PLHRAASAANEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKISQILLERF-SDLQ 148 (152)
Q Consensus 91 ~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~-~~~~ 148 (152)
|||+|+..++.+++++|++.|++++.++..|.|||++|+..|+.+++++|+++| ++++
T Consensus 110 ~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~ 168 (228)
T 2dzn_A 110 CLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVN 168 (228)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSC
T ss_pred HHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCccccc
Confidence 999999999999999999999999999999999999999999999999999999 7665
No 70
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.93 E-value=1.6e-25 Score=149.88 Aligned_cols=122 Identities=26% Similarity=0.265 Sum_probs=113.1
Q ss_pred HHHHHHcCCCC-CCCcCCCCCCC------CCCCCCCccHHHHHHHc---CCHHHHHHHHhcCCCCCccccCCCcCHHHHH
Q psy3338 26 TIILLTTGRYP-PGHLPICSVDP------NIPDNAGYTALHYAARS---NNKPICLLLISRGANVNAVTRAGQATPLHRA 95 (152)
Q Consensus 26 ~~~a~~~g~~~-v~~Ll~~~~~~------~~~~~~g~~~L~~a~~~---g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a 95 (152)
++.|+..|+.+ +..++..|.++ +..+..|.||||+|+.. |+.+++++|+++|++++..+..+ +||||+|
T Consensus 134 l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g-~TpLh~A 212 (278)
T 1dcq_A 134 LCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKG-STALHYC 212 (278)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTC-CCHHHHH
T ss_pred hhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCC-CCHHHHH
Confidence 46788999999 98899999884 44578899999999999 89999999999999999999888 8999999
Q ss_pred HHcCCHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHhCCccc
Q psy3338 96 ASAANEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKISQILLERFSDLQ 148 (152)
Q Consensus 96 ~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~~~~ 148 (152)
+..|+.+++++|++.|++++.+|..|.|||++|+..|+.+++++|+++|++..
T Consensus 213 ~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~ 265 (278)
T 1dcq_A 213 CLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGRF 265 (278)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTCC
T ss_pred HHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 99999999999999999999999999999999999999999999999998654
No 71
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.93 E-value=3.2e-25 Score=147.95 Aligned_cols=129 Identities=29% Similarity=0.263 Sum_probs=120.5
Q ss_pred CCCChhHHHHHHHcCCCC-CCCcCCC-CCCCCCCCCCCccHHHHHHHcCC----HHHHHHHHhcCCCCCccccCCCcCHH
Q psy3338 19 LPEHIPLTIILLTTGRYP-PGHLPIC-SVDPNIPDNAGYTALHYAARSNN----KPICLLLISRGANVNAVTRAGQATPL 92 (152)
Q Consensus 19 ~~~~~~~~~~a~~~g~~~-v~~Ll~~-~~~~~~~~~~g~~~L~~a~~~g~----~~~~~~L~~~~~~~~~~~~~~~~~~l 92 (152)
..+.+|+ +.|+..|+.+ +++|++. |.+++.++..|.||||+|+..++ .+++++|+++|++++.++..+ +|||
T Consensus 146 ~~g~t~L-~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g-~t~L 223 (285)
T 1wdy_A 146 KGGATAL-MDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERG-KTPL 223 (285)
T ss_dssp CCCCCHH-HHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTS-CCHH
T ss_pred cCCCcHH-HHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCC-CcHH
Confidence 4466777 6688999999 9999987 99999999999999999999999 899999999999999988888 8999
Q ss_pred HHHHHcCCHHHHHHHHh-cCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHhCCcccc
Q psy3338 93 HRAASAANEEIVTLLLD-NGADSTLKDSDGLTALDRSRKESHEKISQILLERFSDLQT 149 (152)
Q Consensus 93 ~~a~~~~~~~~~~~Ll~-~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~~~~~ 149 (152)
|+|+..|+.+++++|++ .|++++.++..|.|||++|+..++.+++++|+++|++++.
T Consensus 224 ~~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~Ga~~~~ 281 (285)
T 1wdy_A 224 ILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDC 281 (285)
T ss_dssp HHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSCSCC
T ss_pred HHHHHcCCHHHHHHHHhccCCCccccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCc
Confidence 99999999999999998 8999999999999999999999999999999999999874
No 72
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.93 E-value=6.8e-26 Score=151.54 Aligned_cols=125 Identities=27% Similarity=0.325 Sum_probs=80.0
Q ss_pred cCCCChhHHHHHHHcCCCC-CCCcCCCCC-CCCCCCCC--------------------------------------CccH
Q psy3338 18 ILPEHIPLTIILLTTGRYP-PGHLPICSV-DPNIPDNA--------------------------------------GYTA 57 (152)
Q Consensus 18 ~~~~~~~~~~~a~~~g~~~-v~~Ll~~~~-~~~~~~~~--------------------------------------g~~~ 57 (152)
...|.||+ ++|+..|+.+ +++|++.|. +++..+.. |.||
T Consensus 108 d~~g~T~L-h~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tp 186 (276)
T 4hbd_A 108 DSNGNTAL-HYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAGQTA 186 (276)
T ss_dssp CTTSCCHH-HHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCH
T ss_pred CCCCCCHH-HHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCCCCH
Confidence 34566776 4567777777 777777776 55555544 5566
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHHHcCCHHHHHHHHh-cCCCCCccCCCCCcHHHHHHhcCcHHH
Q psy3338 58 LHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAASAANEEIVTLLLD-NGADSTLKDSDGLTALDRSRKESHEKI 136 (152)
Q Consensus 58 L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~-~g~~~~~~~~~~~~~l~~a~~~~~~~i 136 (152)
||+|+..|+.+++++|+++|++++..+..+ +||||+|+..|+.+++++|++ .|++++.++..|.|||++|+..|+.++
T Consensus 187 Lh~A~~~g~~~~v~~Ll~~gad~n~~d~~G-~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~~~i 265 (276)
T 4hbd_A 187 LMLAVSHGRVDVVKALLACEADVNVQDDDG-STALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALDAGQSEI 265 (276)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCTTS-CCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHTCHHH
T ss_pred HHHHHHcCCHHHHHHHHhCCCCCCCCCCCC-CCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcCCHHH
Confidence 666666666666666666666666666555 566666666666666666665 566666666666666666666666666
Q ss_pred HHHHHHhC
Q psy3338 137 SQILLERF 144 (152)
Q Consensus 137 ~~~L~~~~ 144 (152)
+++|++++
T Consensus 266 v~~Ll~~~ 273 (276)
T 4hbd_A 266 ASMLYSRM 273 (276)
T ss_dssp HHHHHHHC
T ss_pred HHHHHhcc
Confidence 66666553
No 73
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.93 E-value=1.6e-25 Score=157.89 Aligned_cols=124 Identities=31% Similarity=0.428 Sum_probs=63.5
Q ss_pred CChhHHHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHHHcC
Q psy3338 21 EHIPLTIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAASAA 99 (152)
Q Consensus 21 ~~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~~~ 99 (152)
|.||+ ++|+..|+.+ +++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++..+..+ +||||+|+..|
T Consensus 14 g~t~L-~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g-~t~L~~A~~~g 91 (437)
T 1n11_A 14 GLTPL-HVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDD-QTPLHCAARIG 91 (437)
T ss_dssp -CCHH-HHHHHHTCHHHHHHHHHTTCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTS-CCHHHHHHHHT
T ss_pred CCCHH-HHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCC-CCHHHHHHHCC
Confidence 44444 3344555555 555555555555555555555555555555555555555555555444444 45555555555
Q ss_pred CHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHhCCc
Q psy3338 100 NEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKISQILLERFSD 146 (152)
Q Consensus 100 ~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~~ 146 (152)
+.+++++|++.|++++..+..|.|||++|+..|+.+++++|++++++
T Consensus 92 ~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~ 138 (437)
T 1n11_A 92 HTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEAS 138 (437)
T ss_dssp CHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC
T ss_pred CHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCC
Confidence 55555555555555555555555555555555555555555544443
No 74
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.93 E-value=4.1e-26 Score=153.24 Aligned_cols=127 Identities=20% Similarity=0.201 Sum_probs=94.3
Q ss_pred CCChhHHHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHHHc
Q psy3338 20 PEHIPLTIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAASA 98 (152)
Q Consensus 20 ~~~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~~ 98 (152)
.|.||+ ++|+..|+.+ +++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++..+..++.||||+|+..
T Consensus 61 ~g~t~L-~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~ 139 (285)
T 3kea_A 61 ENEFPL-HQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVML 139 (285)
T ss_dssp TTCCHH-HHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHT
T ss_pred CCCCHH-HHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHc
Confidence 467776 5577888888 88888888888888888888888888888888888888888888777665534777777777
Q ss_pred CCHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHhCCccc
Q psy3338 99 ANEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKISQILLERFSDLQ 148 (152)
Q Consensus 99 ~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~~~~ 148 (152)
|+.+++++|++.|.+.... ..|.|||++|+..|+.+++++|+++|++++
T Consensus 140 ~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n 188 (285)
T 3kea_A 140 NDVSIVSYFLSEIPSTFDL-AILLSCIHITIKNGHVDMMILLLDYMTSTN 188 (285)
T ss_dssp TCHHHHHHHHTTSCTTCCC-STHHHHHHHHHHTTCHHHHHHHHHHHHHTC
T ss_pred CCHHHHHHHHhCCCccccc-cCCccHHHHHHHcChHHHHHHHHHcCCCCC
Confidence 7777777777776655222 266677777777777777777777766655
No 75
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.93 E-value=3.3e-25 Score=147.87 Aligned_cols=126 Identities=25% Similarity=0.297 Sum_probs=118.2
Q ss_pred ChhHHHHHHHcCCCC-CCCcCCCCCCCCCC-CCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHHHcC
Q psy3338 22 HIPLTIILLTTGRYP-PGHLPICSVDPNIP-DNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAASAA 99 (152)
Q Consensus 22 ~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~-~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~~~ 99 (152)
.++ ++.|++.|+.+ +++|++.|.+++.. +..|.||||+|+..|+.+++++|+++|++++..+..+ .||||+|+..|
T Consensus 6 ~~~-L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g-~t~L~~A~~~~ 83 (285)
T 1wdy_A 6 NHL-LIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNG-ATPFLLAAIAG 83 (285)
T ss_dssp HHH-HHHHHHTTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTC-CCHHHHHHHHT
T ss_pred chH-HHHHHHcCCHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCC-CCHHHHHHHcC
Confidence 344 47799999999 99999999999988 7789999999999999999999999999999888888 89999999999
Q ss_pred CHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHhCCcccc
Q psy3338 100 NEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKISQILLERFSDLQT 149 (152)
Q Consensus 100 ~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~~~~~ 149 (152)
+.+++++|++.|++++..+..|.|||++|+..++.+++++|+++|++++.
T Consensus 84 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~ 133 (285)
T 1wdy_A 84 SVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNL 133 (285)
T ss_dssp CHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred CHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCccc
Confidence 99999999999999999999999999999999999999999999998763
No 76
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.93 E-value=1.6e-25 Score=151.43 Aligned_cols=122 Identities=22% Similarity=0.220 Sum_probs=115.0
Q ss_pred HHHHHHHcCCCC-CCCcCCCCCCCCC------CCCCCccHHHHHHHc---CCHHHHHHHHhcCCCCCccccCCCcCHHHH
Q psy3338 25 LTIILLTTGRYP-PGHLPICSVDPNI------PDNAGYTALHYAARS---NNKPICLLLISRGANVNAVTRAGQATPLHR 94 (152)
Q Consensus 25 ~~~~a~~~g~~~-v~~Ll~~~~~~~~------~~~~g~~~L~~a~~~---g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~ 94 (152)
.++.|+..|+.+ ++.|++.|.+++. .+..|.||||+|+.. |+.+++++|+++|++++..+..+ +||||+
T Consensus 154 ~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G-~TpLh~ 232 (301)
T 2b0o_E 154 RLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADG-NTALHY 232 (301)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTC-CCHHHH
T ss_pred HHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCC-CCHHHH
Confidence 357799999999 9999999999998 688999999999997 89999999999999999999888 899999
Q ss_pred HHHcCCHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHhCCcc
Q psy3338 95 AASAANEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKISQILLERFSDL 147 (152)
Q Consensus 95 a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~~~ 147 (152)
|+..|+.+++++|++.|++++.+|..|.|||++|+..++.+++++|+++|++.
T Consensus 233 A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~~ 285 (301)
T 2b0o_E 233 AALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGT 285 (301)
T ss_dssp HHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHT
T ss_pred HHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCC
Confidence 99999999999999999999999999999999999999999999999998764
No 77
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.93 E-value=6.8e-25 Score=150.27 Aligned_cols=60 Identities=37% Similarity=0.444 Sum_probs=35.7
Q ss_pred cCHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHhCCccc
Q psy3338 89 ATPLHRAASAANEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKISQILLERFSDLQ 148 (152)
Q Consensus 89 ~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~~~~ 148 (152)
+||||+|+..|+.+++++|++.|++++.++..|.|||++|+..|+.+++++|+++|++++
T Consensus 248 ~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~ 307 (351)
T 3utm_A 248 MTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPS 307 (351)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCC
Confidence 455666666566666666666665555555566666666666666666666666655544
No 78
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.93 E-value=1.2e-25 Score=150.27 Aligned_cols=93 Identities=28% Similarity=0.409 Sum_probs=84.8
Q ss_pred ccCCCChhHHHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHh-cCCCCCccccCCCcCHHHH
Q psy3338 17 PILPEHIPLTIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLIS-RGANVNAVTRAGQATPLHR 94 (152)
Q Consensus 17 ~~~~~~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~-~~~~~~~~~~~~~~~~l~~ 94 (152)
....|.||+ ++|+..|+.+ +++|++.|++++.+|..|.||||+|+..|+.+++++|++ .|++++..+..+ +||+++
T Consensus 179 ~~~~g~tpL-h~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g-~TpL~~ 256 (276)
T 4hbd_A 179 ASQAGQTAL-MLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDG-STALMV 256 (276)
T ss_dssp CTTTCCCHH-HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTS-CCHHHH
T ss_pred cCCCCCCHH-HHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCC-CCHHHH
Confidence 344578888 5688999999 999999999999999999999999999999999999999 899999999888 899999
Q ss_pred HHHcCCHHHHHHHHhcC
Q psy3338 95 AASAANEEIVTLLLDNG 111 (152)
Q Consensus 95 a~~~~~~~~~~~Ll~~g 111 (152)
|+..|+.+++++|+++.
T Consensus 257 A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 257 ALDAGQSEIASMLYSRM 273 (276)
T ss_dssp HHHHTCHHHHHHHHHHC
T ss_pred HHHcCCHHHHHHHHhcc
Confidence 99999999999999763
No 79
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.93 E-value=1.1e-25 Score=150.10 Aligned_cols=129 Identities=26% Similarity=0.244 Sum_probs=114.5
Q ss_pred cCCCChhHHHHHHHc---CCCC-CCCcCCCCCCC-----------CCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCc
Q psy3338 18 ILPEHIPLTIILLTT---GRYP-PGHLPICSVDP-----------NIPDNAGYTALHYAARSNNKPICLLLISRGANVNA 82 (152)
Q Consensus 18 ~~~~~~~~~~~a~~~---g~~~-v~~Ll~~~~~~-----------~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~ 82 (152)
...+.||++. |+.. |+.+ +++|++.|+++ ..+|..|.||||+|+..|+.+++++|+++|++++.
T Consensus 51 ~~~g~tpL~~-A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~ 129 (273)
T 2pnn_A 51 PETGKTCLLK-AMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQA 129 (273)
T ss_dssp TTTCCCHHHH-HHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred CcCCCCHHHH-HHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCc
Confidence 4578899855 5554 9999 99999987542 22567899999999999999999999999999998
Q ss_pred ccc--------------CCCcCHHHHHHHcCCHHHHHHHHh---cCCCCCccCCCCCcHHHHHHhcCc---------HHH
Q psy3338 83 VTR--------------AGQATPLHRAASAANEEIVTLLLD---NGADSTLKDSDGLTALDRSRKESH---------EKI 136 (152)
Q Consensus 83 ~~~--------------~~~~~~l~~a~~~~~~~~~~~Ll~---~g~~~~~~~~~~~~~l~~a~~~~~---------~~i 136 (152)
.+. .+ .||||+|+..|+.+++++|++ .|++++.++..|+||||+|+..++ .++
T Consensus 130 ~~~~~~~~~~~~~~~~~~g-~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~ 208 (273)
T 2pnn_A 130 AANGDFFKKTKGRPGFYFG-ELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSM 208 (273)
T ss_dssp CBCSGGGSSCSSSCCCCSC-BSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHH
T ss_pred cccccccccccccccccCC-CCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHH
Confidence 886 46 899999999999999999999 999999999999999999999887 799
Q ss_pred HHHHHHhCCccc
Q psy3338 137 SQILLERFSDLQ 148 (152)
Q Consensus 137 ~~~L~~~~~~~~ 148 (152)
+++|+++|++++
T Consensus 209 v~~Ll~~ga~~n 220 (273)
T 2pnn_A 209 YNEILILGAKLH 220 (273)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHhhhhcc
Confidence 999999999885
No 80
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.92 E-value=8.1e-25 Score=149.89 Aligned_cols=125 Identities=29% Similarity=0.321 Sum_probs=116.1
Q ss_pred hhHHHHHHHcCCCC-CCCcCC-CCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHHHcCC
Q psy3338 23 IPLTIILLTTGRYP-PGHLPI-CSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAASAAN 100 (152)
Q Consensus 23 ~~~~~~a~~~g~~~-v~~Ll~-~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~~~~ 100 (152)
+++ +.|++.|+.+ ++.|+. .+.+++.+|..|.||||+|+..|+.+++++|+++|++++..+..+ +||||+|+..|+
T Consensus 26 ~~L-~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g-~t~L~~A~~~g~ 103 (351)
T 3utm_A 26 DEL-LEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGG-LVPLHNACSYGH 103 (351)
T ss_dssp HHH-HHHHHHTCHHHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTC-CCHHHHHHHTTC
T ss_pred hhH-HHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCC-CcHHHHHHHCCC
Confidence 444 7788999999 777775 589999999999999999999999999999999999999998888 899999999999
Q ss_pred HHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHhCCcccc
Q psy3338 101 EEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKISQILLERFSDLQT 149 (152)
Q Consensus 101 ~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~~~~~ 149 (152)
.+++++|++.|++++..+..|.|||++|+..|+.+++++|+++|++++.
T Consensus 104 ~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~ 152 (351)
T 3utm_A 104 YEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTL 152 (351)
T ss_dssp HHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcc
Confidence 9999999999999999999999999999999999999999999998763
No 81
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.92 E-value=3.1e-25 Score=149.39 Aligned_cols=127 Identities=27% Similarity=0.327 Sum_probs=112.5
Q ss_pred CChhHHHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHHHcC
Q psy3338 21 EHIPLTIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAASAA 99 (152)
Q Consensus 21 ~~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~~~ 99 (152)
+.+| ++.|+..|+.+ +++|++.|++++..|..|.||||+|+..|+.+++++|+++|++++..+..+ +||||+|+..|
T Consensus 40 ~~t~-l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g-~tpL~~A~~~g 117 (299)
T 1s70_B 40 DGAV-FLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEG-WIPLHAAASCG 117 (299)
T ss_dssp HHHH-HHHHHHHTCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTS-CCHHHHHHHHT
T ss_pred CccH-HHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCC-CcHHHHHHHcC
Confidence 3454 47799999999 999999999999999999999999999999999999999999999988888 89999999999
Q ss_pred CHHHHHHHHhcCCCCCccCC------------------------------------------------------------
Q psy3338 100 NEEIVTLLLDNGADSTLKDS------------------------------------------------------------ 119 (152)
Q Consensus 100 ~~~~~~~Ll~~g~~~~~~~~------------------------------------------------------------ 119 (152)
+.+++++|++.|++++..+.
T Consensus 118 ~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 197 (299)
T 1s70_B 118 YLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAK 197 (299)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTT
T ss_pred CHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcC
Confidence 99999999999998876554
Q ss_pred CCCcHHHHHHhcCcHHHHHHHHHhCCcccc
Q psy3338 120 DGLTALDRSRKESHEKISQILLERFSDLQT 149 (152)
Q Consensus 120 ~~~~~l~~a~~~~~~~i~~~L~~~~~~~~~ 149 (152)
.|.||||+|+..|+.+++++|+++|++++.
T Consensus 198 ~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~ 227 (299)
T 1s70_B 198 SGGTALHVAAAKGYTEVLKLLIQARYDVNI 227 (299)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHTTTCCTTC
T ss_pred CCCCHHHHHHHCCcHHHHHHHHHcCCCCCC
Confidence 466777788888888888888888887763
No 82
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.92 E-value=1.4e-24 Score=130.95 Aligned_cols=104 Identities=28% Similarity=0.394 Sum_probs=96.7
Q ss_pred CCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCc
Q psy3338 44 SVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAASAANEEIVTLLLDNGADSTLKDSDGLT 123 (152)
Q Consensus 44 ~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~ 123 (152)
|+|+ .+|..|.||||+|+..|+.+++++|+++|++++..+..+ +||||+|+..++.+++++|++.|++++.++..|.|
T Consensus 1 G~d~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g-~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t 78 (137)
T 3c5r_A 1 GIDP-FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAG-WTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDS 78 (137)
T ss_dssp ---C-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTS-CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCC
T ss_pred CCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCC-CCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCC
Confidence 5677 788999999999999999999999999999999988888 89999999999999999999999999999999999
Q ss_pred HHHHHHhcCcHHHHHHHHHhCCcccc
Q psy3338 124 ALDRSRKESHEKISQILLERFSDLQT 149 (152)
Q Consensus 124 ~l~~a~~~~~~~i~~~L~~~~~~~~~ 149 (152)
|||+|+..++.+++++|+++|++++.
T Consensus 79 ~L~~A~~~~~~~~v~~Ll~~ga~~~~ 104 (137)
T 3c5r_A 79 PLHDAAKNGHVDIVKLLLSYGASRNA 104 (137)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 99999999999999999999998863
No 83
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.92 E-value=1.9e-25 Score=147.81 Aligned_cols=129 Identities=29% Similarity=0.263 Sum_probs=113.6
Q ss_pred CCCChhHHHHHH--HcCCCC-CCCcCCCCCC-----------CCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccc
Q psy3338 19 LPEHIPLTIILL--TTGRYP-PGHLPICSVD-----------PNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVT 84 (152)
Q Consensus 19 ~~~~~~~~~~a~--~~g~~~-v~~Ll~~~~~-----------~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~ 84 (152)
..|.||++.++. +.|+.+ +++|++.|.+ .+..|..|.||||+|+..|+.+++++|+++|++++..+
T Consensus 44 ~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~ 123 (260)
T 3jxi_A 44 STGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQA 123 (260)
T ss_dssp TTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred CCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccc
Confidence 558899865432 679999 9999997743 44555689999999999999999999999999999887
Q ss_pred --------------cCCCcCHHHHHHHcCCHHHHHHHHh---cCCCCCccCCCCCcHHHHHHhcCc---------HHHHH
Q psy3338 85 --------------RAGQATPLHRAASAANEEIVTLLLD---NGADSTLKDSDGLTALDRSRKESH---------EKISQ 138 (152)
Q Consensus 85 --------------~~~~~~~l~~a~~~~~~~~~~~Ll~---~g~~~~~~~~~~~~~l~~a~~~~~---------~~i~~ 138 (152)
..+ +||||+|+..|+.+++++|++ .|++++.++..|+||||+|+..++ .++++
T Consensus 124 ~~~~~~~~~~~~~~~~g-~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~ 202 (260)
T 3jxi_A 124 RGRFFQPKDEGGYFYFG-ELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYD 202 (260)
T ss_dssp EECCCSSSCCCCSCCSC-SSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHH
T ss_pred cccccCcccccccccCC-CCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHH
Confidence 356 899999999999999999999 999999999999999999998777 69999
Q ss_pred HHHHhCCccc
Q psy3338 139 ILLERFSDLQ 148 (152)
Q Consensus 139 ~L~~~~~~~~ 148 (152)
+|+++|++++
T Consensus 203 ~Ll~~ga~~~ 212 (260)
T 3jxi_A 203 LLLIKCAKLF 212 (260)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHhCcccc
Confidence 9999999874
No 84
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.92 E-value=2.3e-25 Score=153.92 Aligned_cols=98 Identities=24% Similarity=0.298 Sum_probs=58.6
Q ss_pred CCCCCccHHHHHHHcC--CHHHHHHHHhcCCCCCccccCCCcCHHHHHHHcCCHHHHHHHHhcCCC-----CCccCCCCC
Q psy3338 50 PDNAGYTALHYAARSN--NKPICLLLISRGANVNAVTRAGQATPLHRAASAANEEIVTLLLDNGAD-----STLKDSDGL 122 (152)
Q Consensus 50 ~~~~g~~~L~~a~~~g--~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~-----~~~~~~~~~ 122 (152)
++..|.||||+|+..| +.+++++|+++|++++..+..+ +||||+|+..|+.+++++|++.|.+ ++..+..|.
T Consensus 134 ~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g-~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~ 212 (364)
T 3ljn_A 134 KHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKAD-ETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGN 212 (364)
T ss_dssp EEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTS-CCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCC
T ss_pred CCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCCC-CCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCC
Confidence 4445556666666666 5566666666666665555555 5666666666666666666655555 555555666
Q ss_pred cHHHHHHhcCcHHHHHHHHHhCCccc
Q psy3338 123 TALDRSRKESHEKISQILLERFSDLQ 148 (152)
Q Consensus 123 ~~l~~a~~~~~~~i~~~L~~~~~~~~ 148 (152)
||||+|+..|+.+++++|+++|++++
T Consensus 213 t~L~~A~~~g~~~~v~~Ll~~gad~~ 238 (364)
T 3ljn_A 213 SHLHWAILINWEDVAMRFVEMGIDVN 238 (364)
T ss_dssp CTTHHHHTTTCHHHHHHHHTTTCCTT
T ss_pred cHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 66666666666666666666665554
No 85
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.92 E-value=7.9e-26 Score=154.49 Aligned_cols=131 Identities=21% Similarity=0.096 Sum_probs=115.7
Q ss_pred ccCCCChhHHHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCC---HHHHHHHHhcC-CCCCccccCCCcCH
Q psy3338 17 PILPEHIPLTIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNN---KPICLLLISRG-ANVNAVTRAGQATP 91 (152)
Q Consensus 17 ~~~~~~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~---~~~~~~L~~~~-~~~~~~~~~~~~~~ 91 (152)
....|.||+ |+|+..|+.+ +++|+++|++++.+|..|.||||+|+..|+ .++++.|++.+ .+++..+..+ +||
T Consensus 127 ~d~~g~TpL-h~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g-~tp 204 (327)
T 1sw6_A 127 VDEHGNTPL-HWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMN-RTI 204 (327)
T ss_dssp CSTTCCCHH-HHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTC-CCH
T ss_pred cCCCCCcHH-HHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCCCCC-CCH
Confidence 456788888 6688999999 999999999999999999999999999998 67777777776 6788888888 899
Q ss_pred HHHHHH----cCCHHHHHHHHhcCC---------------------------------------------CCCccCCCCC
Q psy3338 92 LHRAAS----AANEEIVTLLLDNGA---------------------------------------------DSTLKDSDGL 122 (152)
Q Consensus 92 l~~a~~----~~~~~~~~~Ll~~g~---------------------------------------------~~~~~~~~~~ 122 (152)
||+|+. .|+.+++++|++.+. +++.++..|+
T Consensus 205 Lh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~~~n~~d~~G~ 284 (327)
T 1sw6_A 205 LHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGD 284 (327)
T ss_dssp HHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHHTTTCCCTTSC
T ss_pred HHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHHHHHHHhCCCCCCCCCC
Confidence 999999 899999999987632 4777888999
Q ss_pred cHHHHHHhcCcHHHHHHHHHhCCcccc
Q psy3338 123 TALDRSRKESHEKISQILLERFSDLQT 149 (152)
Q Consensus 123 ~~l~~a~~~~~~~i~~~L~~~~~~~~~ 149 (152)
||||+|+..|+.+++++|+++|++++.
T Consensus 285 TpLh~A~~~g~~~~v~~Ll~~Gad~~~ 311 (327)
T 1sw6_A 285 TCLNIAARLGNISIVDALLDYGADPFI 311 (327)
T ss_dssp CHHHHHHHHCCHHHHHHHHHTTCCTTC
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCcc
Confidence 999999999999999999999999864
No 86
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.92 E-value=1.6e-24 Score=150.39 Aligned_cols=129 Identities=19% Similarity=0.231 Sum_probs=119.3
Q ss_pred CCCChhHHHHHHHcCCCC-CCCcC--------CCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCc
Q psy3338 19 LPEHIPLTIILLTTGRYP-PGHLP--------ICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQA 89 (152)
Q Consensus 19 ~~~~~~~~~~a~~~g~~~-v~~Ll--------~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~ 89 (152)
..|.||+ ++|+..|+.+ +++|+ +.|++++.+|..|.||||+|+..|+.+++++|+++|++++..+..+ .
T Consensus 123 ~~g~t~L-h~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g-~ 200 (373)
T 2fo1_E 123 RHNRTVL-HWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSE-R 200 (373)
T ss_dssp SSCCCHH-HHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTC-C
T ss_pred cCCCCHH-HHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCCcccCCCC-C
Confidence 4577887 6688999999 99887 7899999999999999999999999999999999999999988888 8
Q ss_pred CHHHHHHHcCCHHHHHHHHhcC---CCCCccCCCCCcHHHHHHhcC---cHHHHHHHHHhCCcccc
Q psy3338 90 TPLHRAASAANEEIVTLLLDNG---ADSTLKDSDGLTALDRSRKES---HEKISQILLERFSDLQT 149 (152)
Q Consensus 90 ~~l~~a~~~~~~~~~~~Ll~~g---~~~~~~~~~~~~~l~~a~~~~---~~~i~~~L~~~~~~~~~ 149 (152)
||||+|+..|+.+++++|++.+ .+++..+..|.|||++|+..+ +.+++++|+++|++++.
T Consensus 201 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~ 266 (373)
T 2fo1_E 201 SALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDY 266 (373)
T ss_dssp CHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSC
T ss_pred CHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCccc
Confidence 9999999999999999999987 788999999999999999998 89999999999998863
No 87
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.92 E-value=6.1e-25 Score=151.91 Aligned_cols=121 Identities=26% Similarity=0.313 Sum_probs=113.7
Q ss_pred HHHHHHHc-CCCC-CCCcCCCCCCCCCCC--CCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHHHcCC
Q psy3338 25 LTIILLTT-GRYP-PGHLPICSVDPNIPD--NAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAASAAN 100 (152)
Q Consensus 25 ~~~~a~~~-g~~~-v~~Ll~~~~~~~~~~--~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~~~~ 100 (152)
.++.|+.. |+.+ +++|++.|++++..+ ..|.||||+|+..|+.+++++|+++|++++..+..+ +||||+|+..|+
T Consensus 202 ~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G-~TpLh~A~~~g~ 280 (368)
T 3jue_A 202 LLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAG-RGPLHHATILGH 280 (368)
T ss_dssp HHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTS-CCHHHHHHHHTC
T ss_pred HHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCC-CCHHHHHHHcCc
Confidence 45678888 9999 999999999999998 789999999999999999999999999999999888 899999999999
Q ss_pred HHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHhCCc
Q psy3338 101 EEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKISQILLERFSD 146 (152)
Q Consensus 101 ~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~~ 146 (152)
.+++++|++.|++++..|..|.|||++|+..++.+++++|+..+..
T Consensus 281 ~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~ 326 (368)
T 3jue_A 281 TGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAKMR 326 (368)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC-
T ss_pred HHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCC
Confidence 9999999999999999999999999999999999999999988744
No 88
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.92 E-value=1.4e-24 Score=141.67 Aligned_cols=127 Identities=27% Similarity=0.363 Sum_probs=103.1
Q ss_pred CChhHHHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHHHcC
Q psy3338 21 EHIPLTIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAASAA 99 (152)
Q Consensus 21 ~~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~~~ 99 (152)
+.+++ +.|+..|+.+ +++|++.|.+++.++..|.||||+|+..|+.+++++|++++.+.+......+.||||+|+..+
T Consensus 9 ~~~~l-~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~ 87 (240)
T 3eu9_A 9 STWDI-VKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQG 87 (240)
T ss_dssp GGCCH-HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHT
T ss_pred cchHH-HHHHHcCChHHHHHHHHcCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHcC
Confidence 34454 5688888888 888888888888888888888888888888888888888888777555543378888888888
Q ss_pred CHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHhCCccc
Q psy3338 100 NEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKISQILLERFSDLQ 148 (152)
Q Consensus 100 ~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~~~~ 148 (152)
+.+++++|++.|++++..+..|.|||++|+..++.+++++|+++|++++
T Consensus 88 ~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~ 136 (240)
T 3eu9_A 88 HLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVD 136 (240)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred CHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCcc
Confidence 8888888888888888888888888888888888888888888887765
No 89
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.91 E-value=5.3e-24 Score=145.73 Aligned_cols=105 Identities=20% Similarity=0.215 Sum_probs=50.4
Q ss_pred CCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhc-CCCCCccccCCCcCHHHHHHHcCCHHHHHHHHhcCCCCCc
Q psy3338 38 GHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISR-GANVNAVTRAGQATPLHRAASAANEEIVTLLLDNGADSTL 116 (152)
Q Consensus 38 ~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~-~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~ 116 (152)
++|+++|++++.+|..|.||||+|+..|+.+++++|+.. +++++.++..| +||||+|+..|+.+++++|+++|++++.
T Consensus 223 ~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G-~TpL~~A~~~g~~~iv~~Ll~~GAd~n~ 301 (337)
T 4g8k_A 223 HLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDG-KTALLLAVELKLKKIAELLCKRGASTDC 301 (337)
T ss_dssp HHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTS-CBHHHHHHHTTCHHHHHHHHTTSCSSTT
T ss_pred HHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCC-CCHHHHHHHcCCHHHHHHHHHCCCCCCC
Confidence 334444445554444555555555555555555544432 44444444444 4555555555555555555555544432
Q ss_pred cCCCCCcHHHHHHhcCcHHHHHHHHHhCCccc
Q psy3338 117 KDSDGLTALDRSRKESHEKISQILLERFSDLQ 148 (152)
Q Consensus 117 ~~~~~~~~l~~a~~~~~~~i~~~L~~~~~~~~ 148 (152)
.+||++|+..++.+++++|+++|++++
T Consensus 302 -----~~~L~~A~~~~~~~iv~~Ll~~GA~~d 328 (337)
T 4g8k_A 302 -----GDLVMTARRNYDHSLVKVLLSHGAKED 328 (337)
T ss_dssp -----CCHHHHHHHTTCHHHHHHHHHTTCCC-
T ss_pred -----CCHHHHHHHcCCHHHHHHHHHCcCCCC
Confidence 234555555555555555555555443
No 90
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.91 E-value=9.6e-25 Score=151.50 Aligned_cols=109 Identities=28% Similarity=0.343 Sum_probs=54.8
Q ss_pred CCCcCCCCCCCCC--------CCCCCccHHHHHHHcCCHHHHHHHHhcC-CCCCccccCCCcCHHHHHHHcCCHHHHHHH
Q psy3338 37 PGHLPICSVDPNI--------PDNAGYTALHYAARSNNKPICLLLISRG-ANVNAVTRAGQATPLHRAASAANEEIVTLL 107 (152)
Q Consensus 37 v~~Ll~~~~~~~~--------~~~~g~~~L~~a~~~g~~~~~~~L~~~~-~~~~~~~~~~~~~~l~~a~~~~~~~~~~~L 107 (152)
+++|++.|++++. .|..|.||||+|+..|+.+++++|++++ ++++..+..+ +||||+|+..|+.+++++|
T Consensus 254 v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g-~TpL~~A~~~g~~~iv~~L 332 (373)
T 2fo1_E 254 AKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDG-KTPIMLAAQEGRIEVVMYL 332 (373)
T ss_dssp HHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTC-CCHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCC-CCHHHHHHHcCCHHHHHHH
Confidence 4455555544443 3334555555555555555555555443 4555444444 4555555555555555555
Q ss_pred HhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHhCCc
Q psy3338 108 LDNGADSTLKDSDGLTALDRSRKESHEKISQILLERFSD 146 (152)
Q Consensus 108 l~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~~ 146 (152)
++.|++++.++..|.|||++|+..|+.+++++|++++++
T Consensus 333 l~~gad~~~~d~~g~t~l~~A~~~g~~~iv~~Ll~~~a~ 371 (373)
T 2fo1_E 333 IQQGASVEAVDATDHTARQLAQANNHHNIVDIFDRCRPE 371 (373)
T ss_dssp HHTTCCSSCCCSSSCCHHHHHHHTTCHHHHHHHHTTC--
T ss_pred HHcCCCccCCCCCCCCHHHHHHHcCCHHHHHHHHhcCcc
Confidence 555555555555555555555555555555555555443
No 91
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.91 E-value=3.1e-24 Score=129.39 Aligned_cols=104 Identities=20% Similarity=0.233 Sum_probs=98.8
Q ss_pred CCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHHHcCCHHHHHHHHhcCCCCCccCCC-CC
Q psy3338 44 SVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAASAANEEIVTLLLDNGADSTLKDSD-GL 122 (152)
Q Consensus 44 ~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~-~~ 122 (152)
+.+++..+..|.||||+|+..|+.+++++|+++|++++..+..+ +||||+|+. ++.+++++|++.|++++.++.. |.
T Consensus 2 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g-~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~ 79 (136)
T 1d9s_A 2 SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFG-RRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLT 79 (136)
T ss_dssp CCCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTC-CTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTB
T ss_pred CCCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCC-CCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCC
Confidence 46788999999999999999999999999999999999998888 899999999 9999999999999999999999 99
Q ss_pred cHHHHHHhcCcHHHHHHHHHhCCcccc
Q psy3338 123 TALDRSRKESHEKISQILLERFSDLQT 149 (152)
Q Consensus 123 ~~l~~a~~~~~~~i~~~L~~~~~~~~~ 149 (152)
||||+|+..++.+++++|+++|++++.
T Consensus 80 t~L~~A~~~~~~~~v~~Ll~~ga~~~~ 106 (136)
T 1d9s_A 80 RPVHDAAREGFLDTLVVLHRAGARLDV 106 (136)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTCCCCCC
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCCc
Confidence 999999999999999999999998763
No 92
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.91 E-value=4.4e-24 Score=125.17 Aligned_cols=100 Identities=37% Similarity=0.522 Sum_probs=93.5
Q ss_pred CCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCcHHHHH
Q psy3338 49 IPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAASAANEEIVTLLLDNGADSTLKDSDGLTALDRS 128 (152)
Q Consensus 49 ~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a 128 (152)
.+|..|.||||+|+..|+.+++++|+++|++++..+..+ +||||+|+..++.+++++|++.|++++.++..|.|||++|
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g-~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A 82 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDG-NTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLA 82 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSS-CCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCC-CCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHH
Confidence 567889999999999999999999999999999888877 8999999999999999999999999999999999999999
Q ss_pred HhcCcHHHHHHHHHhCCcccc
Q psy3338 129 RKESHEKISQILLERFSDLQT 149 (152)
Q Consensus 129 ~~~~~~~i~~~L~~~~~~~~~ 149 (152)
+..++.+++++|+++|++++.
T Consensus 83 ~~~~~~~~~~~Ll~~ga~~n~ 103 (115)
T 2l6b_A 83 KKNGHHEIVKLLDAKGADVNA 103 (115)
T ss_dssp HTTTCHHHHHHHHTTSSSHHH
T ss_pred HHCCCHHHHHHHHHcCCCCCc
Confidence 999999999999999999874
No 93
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.91 E-value=6.7e-24 Score=138.41 Aligned_cols=125 Identities=26% Similarity=0.359 Sum_probs=57.2
Q ss_pred CChhHHHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHHHcC
Q psy3338 21 EHIPLTIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAASAA 99 (152)
Q Consensus 21 ~~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~~~ 99 (152)
+.+|+ +.|+..|+.+ +++|++.|++++.++..|.||||+|+..|+.+++++|+++|++++..+..+ .||+|+|+..+
T Consensus 76 ~~t~L-~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g-~t~l~~a~~~~ 153 (240)
T 3eu9_A 76 NSTPL-HWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNG-MTPLMWAAYRT 153 (240)
T ss_dssp TBCHH-HHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTS-CCHHHHHHHHC
T ss_pred CCChh-HHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCC-CcHHHHHHHhC
Confidence 33443 3345555555 555555555555555555555555555555555555555555444433333 33333333222
Q ss_pred C-HHHHHHHHhcCCCCCccCC-CCCcHHHHHHhcCcHHHHHHHHHhCCcc
Q psy3338 100 N-EEIVTLLLDNGADSTLKDS-DGLTALDRSRKESHEKISQILLERFSDL 147 (152)
Q Consensus 100 ~-~~~~~~Ll~~g~~~~~~~~-~~~~~l~~a~~~~~~~i~~~L~~~~~~~ 147 (152)
. .+++++|++.|.+++..+. .|.|||++|+..++.+++++|+++|+++
T Consensus 154 ~~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 203 (240)
T 3eu9_A 154 HSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANV 203 (240)
T ss_dssp CSSTTHHHHHHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCT
T ss_pred ChHHHHHHHHhcCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 2 2333333333333333332 3444444444444444444444444443
No 94
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.90 E-value=4.8e-23 Score=122.08 Aligned_cols=98 Identities=26% Similarity=0.331 Sum_probs=91.4
Q ss_pred CCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCcHHHHHHh
Q psy3338 51 DNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAASAANEEIVTLLLDNGADSTLKDSDGLTALDRSRK 130 (152)
Q Consensus 51 ~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~ 130 (152)
+..|.+|||+|+..|+.+++++|++.+.+++..+..+ +||||+|+..++.+++++|++.|++++.++..|+||||+|+.
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g-~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~ 82 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGG-RKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVY 82 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTS-SCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCC-CcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHH
Confidence 4578899999999999999999999999999988888 899999999999999999999999999999999999999999
Q ss_pred cCcHHHHHHHHHhCCcccc
Q psy3338 131 ESHEKISQILLERFSDLQT 149 (152)
Q Consensus 131 ~~~~~i~~~L~~~~~~~~~ 149 (152)
.++.+++++|+++|++++.
T Consensus 83 ~~~~~~v~~Ll~~ga~~~~ 101 (123)
T 3aaa_C 83 EGHVSCVKLLLSKGADKTV 101 (123)
T ss_dssp HTCHHHHHHHHHTTCCTTC
T ss_pred cCCHHHHHHHHHcCCCCCC
Confidence 9999999999999998763
No 95
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.90 E-value=2.3e-23 Score=142.62 Aligned_cols=126 Identities=25% Similarity=0.296 Sum_probs=117.9
Q ss_pred ChhHHHHHHHcCCCC-CCCcCCCCCCCCCCCC-CCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHHHcC
Q psy3338 22 HIPLTIILLTTGRYP-PGHLPICSVDPNIPDN-AGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAASAA 99 (152)
Q Consensus 22 ~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~-~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~~~ 99 (152)
.++ ++.|+++|+++ |++|+++|+|++.++. .|.||||+|+..|+.+++++|+++|++++..+..+ .++++.++..+
T Consensus 26 ~t~-L~~Av~~g~~~~V~~LL~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~-~~~~~~~~~~~ 103 (337)
T 4g8k_A 26 NHL-LIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNG-ATPFILAAIAG 103 (337)
T ss_dssp HHH-HHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTC-CCHHHHHHHHT
T ss_pred ChH-HHHHHHcCCHHHHHHHHHCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCC-CchhHHHHhcc
Confidence 444 47799999999 9999999999999876 59999999999999999999999999999999888 89999999999
Q ss_pred CHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHhCCcccc
Q psy3338 100 NEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKISQILLERFSDLQT 149 (152)
Q Consensus 100 ~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~~~~~ 149 (152)
...+...++..+.+++..+..|.||+++|+..|+.+++++|+++|++++.
T Consensus 104 ~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~ 153 (337)
T 4g8k_A 104 SVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNL 153 (337)
T ss_dssp CHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred cchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcch
Confidence 99999999999999999999999999999999999999999999998763
No 96
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.89 E-value=1.4e-22 Score=132.10 Aligned_cols=112 Identities=21% Similarity=0.191 Sum_probs=95.9
Q ss_pred CCCcCCCCCCCCCCCC---CCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHHHcCCHHHHHHHHhcCCC
Q psy3338 37 PGHLPICSVDPNIPDN---AGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAASAANEEIVTLLLDNGAD 113 (152)
Q Consensus 37 v~~Ll~~~~~~~~~~~---~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~ 113 (152)
++.|++.|.+++..+. .+.||||+|+..|+.+++++|+++|++++..+..+ +||||+|+..|+.+++++|++.|++
T Consensus 1 v~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g-~tpLh~A~~~g~~~~v~~Ll~~ga~ 79 (229)
T 2vge_A 1 MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEG-ITALHNAICGANYSIVDFLITAGAN 79 (229)
T ss_dssp ---------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTS-CCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred CeehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCC-CCHHHHHHHcCCHHHHHHHHHCCCC
Confidence 4678888888776554 56678999999999999999999999999998888 8999999999999999999999999
Q ss_pred CCccCCCCCcHHHHHHhcCcHHHHHHHHHhCCcccc
Q psy3338 114 STLKDSDGLTALDRSRKESHEKISQILLERFSDLQT 149 (152)
Q Consensus 114 ~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~~~~~ 149 (152)
++..+..|.|||++|+..|+.+++++|+++|++++.
T Consensus 80 ~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~ 115 (229)
T 2vge_A 80 VNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFA 115 (229)
T ss_dssp TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTC
T ss_pred CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccc
Confidence 999999999999999999999999999999999864
No 97
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.89 E-value=2.2e-23 Score=117.84 Aligned_cols=91 Identities=38% Similarity=0.512 Sum_probs=84.9
Q ss_pred CChhHHHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHHHcC
Q psy3338 21 EHIPLTIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAASAA 99 (152)
Q Consensus 21 ~~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~~~ 99 (152)
|.||+ ++|+..|+.+ +++|++.|++++.+|..|.||||+|+..|+.+++++|+++|++++.++..+ +||+|+|+..|
T Consensus 2 g~t~L-~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g-~t~l~~A~~~~ 79 (93)
T 1n0q_A 2 GRTPL-HLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNG-RTPLHLAARNG 79 (93)
T ss_dssp -CCHH-HHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTS-CCHHHHHHHTT
T ss_pred CCcHH-HHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCC-CCHHHHHHHcC
Confidence 67787 6688999999 999999999999999999999999999999999999999999999999888 89999999999
Q ss_pred CHHHHHHHHhcCCC
Q psy3338 100 NEEIVTLLLDNGAD 113 (152)
Q Consensus 100 ~~~~~~~Ll~~g~~ 113 (152)
+.+++++|++.|++
T Consensus 80 ~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 80 HLEVVKLLLEAGAY 93 (93)
T ss_dssp CHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHcCCC
Confidence 99999999998864
No 98
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.89 E-value=3.2e-24 Score=135.77 Aligned_cols=124 Identities=18% Similarity=0.143 Sum_probs=106.9
Q ss_pred ChhHHHHHHHcCCCC-CCCcCCCCCCCCCCC-CCCccHHHHHHHcCCH----HHHHHHHhcCCCCCccccCCCcCHHHHH
Q psy3338 22 HIPLTIILLTTGRYP-PGHLPICSVDPNIPD-NAGYTALHYAARSNNK----PICLLLISRGANVNAVTRAGQATPLHRA 95 (152)
Q Consensus 22 ~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~-~~g~~~L~~a~~~g~~----~~~~~L~~~~~~~~~~~~~~~~~~l~~a 95 (152)
.+++ +.|++.|+.+ ++.++..+ ++.++ ..|.||||+|+..|+. +++++|+++|++++.++..+ +||||+|
T Consensus 7 ~~~l-~~Aa~~g~~~~~~~l~~~~--~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g-~TpLh~a 82 (186)
T 3t8k_A 7 YRTV-SAAAMLGTYEDFLELFEKG--YEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEG-TTLFFPL 82 (186)
T ss_dssp CSSH-HHHHHHSCHHHHHHHHHHS--SSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTC-CCTHHHH
T ss_pred ccHH-HHHHHcCCHHHHHHHHhcC--cccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCC-CcHHHHH
Confidence 3444 6688999999 88887765 44555 6799999999999975 48999999999999999888 8999999
Q ss_pred HHcCC------HHHHHHHHhcCCCCCccCCCCC-cHHHHHHhcC-----cHHHHHHHHH-hCCcccc
Q psy3338 96 ASAAN------EEIVTLLLDNGADSTLKDSDGL-TALDRSRKES-----HEKISQILLE-RFSDLQT 149 (152)
Q Consensus 96 ~~~~~------~~~~~~Ll~~g~~~~~~~~~~~-~~l~~a~~~~-----~~~i~~~L~~-~~~~~~~ 149 (152)
+..++ .+++++|++.|++++.+|..|. ||||+|+..+ ..+++++|++ +|++++.
T Consensus 83 ~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~ 149 (186)
T 3t8k_A 83 FQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLI 149 (186)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTC
T ss_pred HHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcc
Confidence 99887 5789999999999999999999 9999999944 4579999999 9999874
No 99
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.89 E-value=1.8e-23 Score=131.91 Aligned_cols=118 Identities=25% Similarity=0.203 Sum_probs=101.1
Q ss_pred HHcCCCC-CCCcCCCCCCCCC-----------CCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHHH
Q psy3338 30 LTTGRYP-PGHLPICSVDPNI-----------PDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAAS 97 (152)
Q Consensus 30 ~~~g~~~-v~~Ll~~~~~~~~-----------~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~ 97 (152)
++.|..+ +++|++.+..... .+..|.||||+|+..|+.+++++|++ +.+++..+..+ +||||+|+.
T Consensus 8 a~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g-~t~L~~A~~ 85 (183)
T 3deo_A 8 SRTAGEGAMEYLIEWKDGHSPSWVPSSYIAADVVSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENG-RTALLFVAG 85 (183)
T ss_dssp EEEETTTEEEEEEEETTCCCCEEEEGGGSCHHHHHHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTS-CCHHHHHHH
T ss_pred HHhcCCchhHHHHHHhCCCCccccchhcccccCCCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCC-CCHHHHHHH
Confidence 3455556 6666654322211 24578999999999999999999999 99999998888 899999999
Q ss_pred cCCHHHHHHHHhcCCCCCccC-CCCCcHHHHHHhcCcHHHHHHHHHhCCcccc
Q psy3338 98 AANEEIVTLLLDNGADSTLKD-SDGLTALDRSRKESHEKISQILLERFSDLQT 149 (152)
Q Consensus 98 ~~~~~~~~~Ll~~g~~~~~~~-~~~~~~l~~a~~~~~~~i~~~L~~~~~~~~~ 149 (152)
.|+.+++++|++.|++++..+ ..|.||||+|+..|+.+++++|+++|++++.
T Consensus 86 ~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~ 138 (183)
T 3deo_A 86 LGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEV 138 (183)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHHTTCHHHHHHHHHHTCCTTC
T ss_pred cCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCcC
Confidence 999999999999999999888 8899999999999999999999999998863
No 100
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.88 E-value=2.6e-22 Score=120.91 Aligned_cols=98 Identities=34% Similarity=0.399 Sum_probs=92.3
Q ss_pred CCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCcHHHHHHh
Q psy3338 51 DNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAASAANEEIVTLLLDNGADSTLKDSDGLTALDRSRK 130 (152)
Q Consensus 51 ~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~ 130 (152)
...+.||||+|+..|+.+++++|+++|++++..+..+ +||||+|+..++.+++++|++.|++++..+..|.||||+|+.
T Consensus 11 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g-~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~ 89 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYG-LTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAF 89 (136)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTS-CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred cccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCC-CCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHH
Confidence 3468899999999999999999999999999988888 899999999999999999999999999999999999999999
Q ss_pred cCcHHHHHHHHHhCCcccc
Q psy3338 131 ESHEKISQILLERFSDLQT 149 (152)
Q Consensus 131 ~~~~~i~~~L~~~~~~~~~ 149 (152)
.++.+++++|+++|++++.
T Consensus 90 ~~~~~~v~~Ll~~g~~~~~ 108 (136)
T 2jab_A 90 IGHLEIAEVLLKHGADVNA 108 (136)
T ss_dssp HTCHHHHHHHHHTTCCTTC
T ss_pred cCCHHHHHHHHHcCCCCcC
Confidence 9999999999999998763
No 101
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.88 E-value=1.7e-21 Score=115.37 Aligned_cols=96 Identities=41% Similarity=0.601 Sum_probs=91.3
Q ss_pred CCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcC
Q psy3338 53 AGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAASAANEEIVTLLLDNGADSTLKDSDGLTALDRSRKES 132 (152)
Q Consensus 53 ~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~ 132 (152)
.|.||||+|+..|+.+++++|++++.+++..+..+ .||+|+|+..++.+++++|++.|.+++.++..|.|||++|+..+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g-~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~ 79 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNG-RTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNG 79 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTS-CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCC-CcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcC
Confidence 48899999999999999999999999999888877 89999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHhCCcccc
Q psy3338 133 HEKISQILLERFSDLQT 149 (152)
Q Consensus 133 ~~~i~~~L~~~~~~~~~ 149 (152)
+.+++++|+++|++++.
T Consensus 80 ~~~~~~~Ll~~g~~~~~ 96 (126)
T 1n0r_A 80 HLEVVKLLLEAGADVNA 96 (126)
T ss_dssp CHHHHHHHHHTTCCTTC
T ss_pred hHHHHHHHHHcCCCCcc
Confidence 99999999999998763
No 102
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.87 E-value=4.1e-23 Score=120.99 Aligned_cols=106 Identities=31% Similarity=0.367 Sum_probs=96.4
Q ss_pred cCCCChhHHHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHH
Q psy3338 18 ILPEHIPLTIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAA 96 (152)
Q Consensus 18 ~~~~~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~ 96 (152)
...+.+|+ ++|+..|+.+ +++|++.|++++.+|..|.||||+|+..|+.+++++|+++|++++..+..+ +|||++|+
T Consensus 6 d~~g~t~L-~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g-~tpl~~A~ 83 (115)
T 2l6b_A 6 SKDGNTPL-HNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDG-NTPEHLAK 83 (115)
T ss_dssp SCSSCCHH-HHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTC-CCTTHHHH
T ss_pred CCCCCCHH-HHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCC-CCHHHHHH
Confidence 45677887 6688999999 999999999999999999999999999999999999999999999998888 89999999
Q ss_pred HcCCHHHHHHHHhcCCCCCccCCCCCcHH
Q psy3338 97 SAANEEIVTLLLDNGADSTLKDSDGLTAL 125 (152)
Q Consensus 97 ~~~~~~~~~~Ll~~g~~~~~~~~~~~~~l 125 (152)
..++.+++++|++.|++++..+..+.+|-
T Consensus 84 ~~~~~~~~~~Ll~~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 84 KNGHHEIVKLLDAKGADVNARSWGSSHHH 112 (115)
T ss_dssp TTTCHHHHHHHHTTSSSHHHHSCCCC---
T ss_pred HCCCHHHHHHHHHcCCCCCcCCccccccc
Confidence 99999999999999999999999988874
No 103
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.87 E-value=1.7e-21 Score=113.34 Aligned_cols=93 Identities=35% Similarity=0.424 Sum_probs=84.9
Q ss_pred CCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCcHHH
Q psy3338 47 PNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAASAANEEIVTLLLDNGADSTLKDSDGLTALD 126 (152)
Q Consensus 47 ~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~ 126 (152)
+...+..|.|+||+|+..|+.+++++|+++|++++..+..+ +||||+|+..|+.+++++|++.|++++.++..|.|||+
T Consensus 17 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g-~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~ 95 (110)
T 2zgd_A 17 GSHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNG-STPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFD 95 (110)
T ss_dssp -----CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTC-CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred ccccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCC-CCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHH
Confidence 44567789999999999999999999999999999998877 89999999999999999999999999999999999999
Q ss_pred HHHhcCcHHHHHHH
Q psy3338 127 RSRKESHEKISQIL 140 (152)
Q Consensus 127 ~a~~~~~~~i~~~L 140 (152)
+|+..++.+++++|
T Consensus 96 ~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 96 ISIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHHTCHHHHHHH
T ss_pred HHHHcCCHHHHHHh
Confidence 99999999999987
No 104
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.86 E-value=8.2e-22 Score=121.33 Aligned_cols=100 Identities=22% Similarity=0.222 Sum_probs=91.3
Q ss_pred CCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCc-HHH
Q psy3338 48 NIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAASAANEEIVTLLLDNGADSTLKDSDGLT-ALD 126 (152)
Q Consensus 48 ~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~-~l~ 126 (152)
+..+..|.||||+|+..|+.+++++|+++|++++..+..+ +||||+|+ .|+.+++++|++.|++++.++..|.| |||
T Consensus 6 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g-~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~ 83 (156)
T 1bi7_B 6 GSSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYG-RRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVH 83 (156)
T ss_dssp ----CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSS-CCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHH
T ss_pred cCCCccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCC-CCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHH
Confidence 4456779999999999999999999999999999998888 89999985 89999999999999999999999999 999
Q ss_pred HHHhcCcHHHHHHHHHhCCcccc
Q psy3338 127 RSRKESHEKISQILLERFSDLQT 149 (152)
Q Consensus 127 ~a~~~~~~~i~~~L~~~~~~~~~ 149 (152)
+|+..|+.+++++|+++|++++.
T Consensus 84 ~A~~~~~~~~v~~Ll~~ga~~~~ 106 (156)
T 1bi7_B 84 DAAREGFLDTLVVLHRAGARLDV 106 (156)
T ss_dssp HHHHHTCHHHHHHHHHHTCCSSC
T ss_pred HHHHCCCHHHHHHHHHcCCCCcc
Confidence 99999999999999999998864
No 105
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.86 E-value=1.8e-21 Score=126.11 Aligned_cols=98 Identities=23% Similarity=0.263 Sum_probs=92.6
Q ss_pred CCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHHHcCCHHHHHHHHhc-CCCCCccCCCCCcHHHHHH
Q psy3338 51 DNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAASAANEEIVTLLLDN-GADSTLKDSDGLTALDRSR 129 (152)
Q Consensus 51 ~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~-g~~~~~~~~~~~~~l~~a~ 129 (152)
+..|.||||+|+..|+.+++++|++.|++++..+..+ +||||+|+..|+.+++++|++. |++++.++..|.|||++|+
T Consensus 70 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g-~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~ 148 (222)
T 3ehr_A 70 AESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAG-STALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAA 148 (222)
T ss_dssp EEEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTS-CCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHH
T ss_pred ccccccccccccccCcHHHHHHHHhCCCCccccCCCC-CCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHH
Confidence 3457899999999999999999999999999888888 8999999999999999999998 9999999999999999999
Q ss_pred hcCcHHHHHHHHHhCCcccc
Q psy3338 130 KESHEKISQILLERFSDLQT 149 (152)
Q Consensus 130 ~~~~~~i~~~L~~~~~~~~~ 149 (152)
..|+.+++++|+++|++++.
T Consensus 149 ~~~~~~~v~~Ll~~ga~~~~ 168 (222)
T 3ehr_A 149 WKGYADIVQLLLAKGARTDL 168 (222)
T ss_dssp HHTCHHHHHHHHHHTCCSCC
T ss_pred HcCCHHHHHHHHHcCCCCcc
Confidence 99999999999999998864
No 106
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.86 E-value=1.4e-22 Score=138.49 Aligned_cols=117 Identities=21% Similarity=0.197 Sum_probs=102.8
Q ss_pred HHHHHcCCCC-CCCcCCCCCCCCC-CCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHHHcCC---H
Q psy3338 27 IILLTTGRYP-PGHLPICSVDPNI-PDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAASAAN---E 101 (152)
Q Consensus 27 ~~a~~~g~~~-v~~Ll~~~~~~~~-~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~~~~---~ 101 (152)
+.++..+..+ ++.|++.|++++. +|..|.||||+|+..|+.+++++|+++|++++..+..+ +||||+|+..|+ .
T Consensus 102 ~~a~~~~~~~~~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g-~TpLh~A~~~g~~~~~ 180 (327)
T 1sw6_A 102 HVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMG-ESCLVKAVKSVNNYDS 180 (327)
T ss_dssp --CHHHHHHHHHHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTC-CCHHHHHHHSSHHHHT
T ss_pred HHHHHhhHHHHHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCC-CCHHHHHHHhcccccH
Confidence 4555555566 7888999999999 89999999999999999999999999999999999888 899999999988 5
Q ss_pred HHHHHHHhcC-CCCCccCCCCCcHHHHHHh----cCcHHHHHHHHHhC
Q psy3338 102 EIVTLLLDNG-ADSTLKDSDGLTALDRSRK----ESHEKISQILLERF 144 (152)
Q Consensus 102 ~~~~~Ll~~g-~~~~~~~~~~~~~l~~a~~----~~~~~i~~~L~~~~ 144 (152)
++++.|++.+ .+++.++..|+||||+|+. .|+.+++++|++.+
T Consensus 181 ~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~ 228 (327)
T 1sw6_A 181 GTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDIL 228 (327)
T ss_dssp TCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHH
T ss_pred HHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHH
Confidence 6667777665 6788999999999999999 89999999999884
No 107
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.85 E-value=3.1e-22 Score=135.29 Aligned_cols=109 Identities=26% Similarity=0.212 Sum_probs=91.5
Q ss_pred cCCCChhHHHHHHHc---CCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHH
Q psy3338 18 ILPEHIPLTIILLTT---GRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLH 93 (152)
Q Consensus 18 ~~~~~~~~~~~a~~~---g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~ 93 (152)
...+.||++. |+.. |+.+ +++|++.|++++.+|..|.||||+|+..|+.+++++|+++|++++.++..+ .|||+
T Consensus 187 ~~~g~t~Lh~-A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G-~TpL~ 264 (301)
T 2b0o_E 187 QAPEELVLHL-AVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAG-ETALD 264 (301)
T ss_dssp CSCEECHHHH-HHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCCSCCCTTS-CCHHH
T ss_pred CCCCccHHHH-HHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCC-CCHHH
Confidence 4567788855 5555 7788 999999999999999999999999999999999999999999999999888 89999
Q ss_pred HHHHcCCHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcH
Q psy3338 94 RAASAANEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHE 134 (152)
Q Consensus 94 ~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~ 134 (152)
+|+..++.+++++|++.|.+ .|.|||++|+..|+.
T Consensus 265 ~A~~~~~~~iv~~Ll~~ga~------~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 265 IARKKHHKECEELLEQAQAG------TFAFPLHVDYSWVIS 299 (301)
T ss_dssp HHHHHTCHHHHHHHHHHHHH------TTSSCCC--------
T ss_pred HHHHcCCHHHHHHHHHhcCC------CCCChhHHHHhcCCc
Confidence 99999999999999998765 588999999988764
No 108
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.84 E-value=5.4e-23 Score=142.64 Aligned_cols=123 Identities=12% Similarity=0.109 Sum_probs=100.7
Q ss_pred CChhHHHHHHHcCCCC-CCCcCCCCCCC---CCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCC---CccccCCCcCHHH
Q psy3338 21 EHIPLTIILLTTGRYP-PGHLPICSVDP---NIPDNAGYTALHYAARSNNKPICLLLISRGANV---NAVTRAGQATPLH 93 (152)
Q Consensus 21 ~~~~~~~~a~~~g~~~-v~~Ll~~~~~~---~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~---~~~~~~~~~~~l~ 93 (152)
+.||+ +.|+..|+.+ +++|++.|.+. +..+..|.||||+|+..|+.+++++|+++|++. +.... . +||||
T Consensus 92 ~~T~L-h~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~-~-~TpLh 168 (376)
T 2aja_A 92 SEVIC-FVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAE-N-YHAFR 168 (376)
T ss_dssp HHHHH-HHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHH-H-HHHHH
T ss_pred cCCHH-HHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCC-C-CCHHH
Confidence 34666 6789999999 99999998732 234456889999999999999999999999762 22222 2 69999
Q ss_pred HHHHcCCHHHHHHHHhcCCCCCc--cCCCCCcHHHHHH-hcCcHHHHHHHHHhCCc
Q psy3338 94 RAASAANEEIVTLLLDNGADSTL--KDSDGLTALDRSR-KESHEKISQILLERFSD 146 (152)
Q Consensus 94 ~a~~~~~~~~~~~Ll~~g~~~~~--~~~~~~~~l~~a~-~~~~~~i~~~L~~~~~~ 146 (152)
+|+..|+.+++++|++.|++++. .+..|.|||++|+ ..|+.+++++|+++|++
T Consensus 169 ~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga~ 224 (376)
T 2aja_A 169 LAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVM 224 (376)
T ss_dssp HHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHHH
T ss_pred HHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCCc
Confidence 99999999999999999998776 7788999999999 99999999999987643
No 109
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.84 E-value=9.1e-21 Score=124.61 Aligned_cols=96 Identities=28% Similarity=0.327 Sum_probs=90.9
Q ss_pred CCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHHHcCCHHHHHHHHhcCCCCCccC-CCCCcHHHHHHh
Q psy3338 52 NAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAASAANEEIVTLLLDNGADSTLKD-SDGLTALDRSRK 130 (152)
Q Consensus 52 ~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~-~~~~~~l~~a~~ 130 (152)
..|.||||+|+..|+.+++++|++ +.+++..+..+ +||||+|+..|+.+++++|++.|++++..+ ..|.||||+|+.
T Consensus 43 ~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g-~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~ 120 (244)
T 3ui2_A 43 SEYETPWWTAARKADEQALSQLLE-DRDVDAVDENG-RTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAG 120 (244)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTS-CBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHH
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCC-CCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHH
Confidence 468999999999999999999999 99999999888 899999999999999999999999999888 789999999999
Q ss_pred cCcHHHHHHHHHhCCcccc
Q psy3338 131 ESHEKISQILLERFSDLQT 149 (152)
Q Consensus 131 ~~~~~i~~~L~~~~~~~~~ 149 (152)
.|+.+++++|+++|++++.
T Consensus 121 ~g~~~~v~~Ll~~ga~~~~ 139 (244)
T 3ui2_A 121 YVRPEVVEALVELGADIEV 139 (244)
T ss_dssp TTCHHHHHHHHHTTCCTTC
T ss_pred cCCHHHHHHHHHCCCCCCC
Confidence 9999999999999999863
No 110
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.80 E-value=5.5e-20 Score=131.91 Aligned_cols=105 Identities=26% Similarity=0.216 Sum_probs=86.5
Q ss_pred cCCCChhHHHHHHH---cCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHH
Q psy3338 18 ILPEHIPLTIILLT---TGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLH 93 (152)
Q Consensus 18 ~~~~~~~~~~~a~~---~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~ 93 (152)
...|.||+|. |+. .|+.+ +++|+++|+|++.+|..|.||||+|+..|+.+++++|+++|++++..+..+ +||||
T Consensus 168 ~~~g~t~Lh~-A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g-~tpl~ 245 (497)
T 3lvq_E 168 QAPEELVLHL-AVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAG-ETALD 245 (497)
T ss_dssp CCSCBCHHHH-HHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHHHHHTTTTCHHHHHHHHHTCCCCSCCCTTC-CCHHH
T ss_pred ccccchHHHH-HHHhcccccHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCC-CCHHH
Confidence 4568888855 644 88888 999999999999999999999999999999999999999999999999888 89999
Q ss_pred HHHHcCCHHHHHHHHhcCCCCCccCCCCCcH
Q psy3338 94 RAASAANEEIVTLLLDNGADSTLKDSDGLTA 124 (152)
Q Consensus 94 ~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~ 124 (152)
+|+..|+.+++++|++.|++++.......++
T Consensus 246 ~A~~~~~~~~~~~Ll~~ga~~~~~~~h~~~~ 276 (497)
T 3lvq_E 246 IARKKHHKECEELLEQAQAGTFAFPLHVDYS 276 (497)
T ss_dssp HHHHTTCHHHHHHHHHTCC------------
T ss_pred HHHHcCCHHHHHHHHHhCCCCCCCcceeecc
Confidence 9999999999999999999987644433333
No 111
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.80 E-value=8.4e-23 Score=141.67 Aligned_cols=118 Identities=13% Similarity=0.099 Sum_probs=102.1
Q ss_pred CChhHHHHHHHcCCCC-CCCcCCCCCCC---CCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCc--cccCCCcCHHHH
Q psy3338 21 EHIPLTIILLTTGRYP-PGHLPICSVDP---NIPDNAGYTALHYAARSNNKPICLLLISRGANVNA--VTRAGQATPLHR 94 (152)
Q Consensus 21 ~~~~~~~~a~~~g~~~-v~~Ll~~~~~~---~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~--~~~~~~~~~l~~ 94 (152)
+.+|+ ++|+.+|+.+ +++|+++|+++ +..+.. .||||+|+..|+.+++++|+++|++++. .+..+ +||||+
T Consensus 128 ~~tpL-~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g-~TpL~~ 204 (376)
T 2aja_A 128 NYQAF-RLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAEN-YYAFRW 204 (376)
T ss_dssp HHHHH-HHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHH-HHHHHH
T ss_pred CCCHH-HHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCC-CCHHHH
Confidence 45666 7799999999 99999999752 333333 8999999999999999999999999776 66667 899999
Q ss_pred HH-HcCCHHHHHHHHhcCCCCCccCCCCCcHHHHHHhcCcHHHHHHHHHhCCccc
Q psy3338 95 AA-SAANEEIVTLLLDNGADSTLKDSDGLTALDRSRKESHEKISQILLERFSDLQ 148 (152)
Q Consensus 95 a~-~~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~~~~ 148 (152)
|+ ..|+.+++++|++.|. .+.||+++|+..|+.+++++|+++|++++
T Consensus 205 Aa~~~G~~eiv~~Ll~~ga-------~~~taL~~Aa~~g~~evv~lL~~~ga~~~ 252 (376)
T 2aja_A 205 AAVGRGHHNVINFLLDCPV-------MLAYAEIHEFEYGEKYVNPFIARHVNRLK 252 (376)
T ss_dssp HHSTTCCHHHHHHHTTSHH-------HHHHHHHCTTTTTTTTHHHHHHHHHHHHH
T ss_pred HHHHCCCHHHHHHHHhCCC-------ccchHHHHHHHCCCHHHHHHHHhcCcccc
Confidence 99 9999999999998663 38899999999999999999999998764
No 112
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.79 E-value=1.3e-19 Score=105.29 Aligned_cols=88 Identities=26% Similarity=0.293 Sum_probs=80.3
Q ss_pred cCCCChhHHHHHHHcCCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHHHHH
Q psy3338 18 ILPEHIPLTIILLTTGRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLHRAA 96 (152)
Q Consensus 18 ~~~~~~~~~~~a~~~g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~~a~ 96 (152)
...+.+++ +.|+..|+.+ +++|++.|++++.+|..|.||||+|+..|+.+++++|+++|++++..+..+ +||+|+|+
T Consensus 21 ~~~g~t~L-~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g-~tpl~~A~ 98 (110)
T 2zgd_A 21 GSDLGKKL-LEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFG-KTAFDISI 98 (110)
T ss_dssp -CCHHHHH-HHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTS-CCHHHHHH
T ss_pred CCccchHH-HHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCC-CcHHHHHH
Confidence 34456666 6788999999 999999999999999999999999999999999999999999999999888 89999999
Q ss_pred HcCCHHHHHHH
Q psy3338 97 SAANEEIVTLL 107 (152)
Q Consensus 97 ~~~~~~~~~~L 107 (152)
..++.+++++|
T Consensus 99 ~~~~~~~~~~L 109 (110)
T 2zgd_A 99 DNGNEDLAEIL 109 (110)
T ss_dssp HHTCHHHHHHH
T ss_pred HcCCHHHHHHh
Confidence 99999999876
No 113
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.79 E-value=1.6e-19 Score=120.81 Aligned_cols=95 Identities=23% Similarity=0.271 Sum_probs=86.5
Q ss_pred cCCCChhHHHHHHHc---CCCC-CCCcCCCCCCCCCCCCCCccHHHHHHHcCCHHHHHHHHhcCCCCCccccCCCcCHHH
Q psy3338 18 ILPEHIPLTIILLTT---GRYP-PGHLPICSVDPNIPDNAGYTALHYAARSNNKPICLLLISRGANVNAVTRAGQATPLH 93 (152)
Q Consensus 18 ~~~~~~~~~~~a~~~---g~~~-v~~Ll~~~~~~~~~~~~g~~~L~~a~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~l~ 93 (152)
...|.||++. |+.. |+.+ +++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.++..+ .||||
T Consensus 166 ~~~g~t~Lh~-A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g-~tpL~ 243 (278)
T 1dcq_A 166 HEPDETALHL-AVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESG-ETPLD 243 (278)
T ss_dssp SSTTCBHHHH-HHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTS-CCHHH
T ss_pred ccCCCCcchH-HHHhcccchHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCccCCC-CCHHH
Confidence 4568899855 5566 7788 999999999999999999999999999999999999999999999999888 89999
Q ss_pred HHHHcCCHHHHHHHHhcCCCC
Q psy3338 94 RAASAANEEIVTLLLDNGADS 114 (152)
Q Consensus 94 ~a~~~~~~~~~~~Ll~~g~~~ 114 (152)
+|+..|+.+++++|++.|++.
T Consensus 244 ~A~~~~~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 244 IAKRLKHEHCEELLTQALSGR 264 (278)
T ss_dssp HHHHTTCHHHHHHHHHHHTTC
T ss_pred HHHHcCCHHHHHHHHHcCCCC
Confidence 999999999999999987653
No 114
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.77 E-value=2.1e-18 Score=119.29 Aligned_cols=96 Identities=29% Similarity=0.336 Sum_probs=90.2
Q ss_pred CCccHHHHHHHc-CCHHHHHHHHhcCCCCCccc--cCCCcCHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCcHHHHHH
Q psy3338 53 AGYTALHYAARS-NNKPICLLLISRGANVNAVT--RAGQATPLHRAASAANEEIVTLLLDNGADSTLKDSDGLTALDRSR 129 (152)
Q Consensus 53 ~g~~~L~~a~~~-g~~~~~~~L~~~~~~~~~~~--~~~~~~~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~l~~a~ 129 (152)
.+.++||.|+.. |+.+++++|+..|++++..+ ..+ .||||+|+..|+.+++++|++.|++++..+..|.||||+|+
T Consensus 198 ~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g-~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~ 276 (368)
T 3jue_A 198 HPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDN-ATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHAT 276 (368)
T ss_dssp CHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTC-CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred CCCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCC-CCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH
Confidence 456799999999 99999999999999999887 566 89999999999999999999999999999999999999999
Q ss_pred hcCcHHHHHHHHHhCCcccc
Q psy3338 130 KESHEKISQILLERFSDLQT 149 (152)
Q Consensus 130 ~~~~~~i~~~L~~~~~~~~~ 149 (152)
..|+.+++++|+++|++++.
T Consensus 277 ~~g~~~~v~~LL~~Gad~~~ 296 (368)
T 3jue_A 277 ILGHTGLACLFLKRGADLGA 296 (368)
T ss_dssp HHTCHHHHHHHHHTTCCTTC
T ss_pred HcCcHHHHHHHHHCcCCCCC
Confidence 99999999999999999864
No 115
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=34.19 E-value=35 Score=15.13 Aligned_cols=18 Identities=11% Similarity=0.143 Sum_probs=10.8
Q ss_pred HHHHHhcCcHHHHHHHHH
Q psy3338 125 LDRSRKESHEKISQILLE 142 (152)
Q Consensus 125 l~~a~~~~~~~i~~~L~~ 142 (152)
+..|+..|..+-++.|..
T Consensus 17 iyvA~seGd~etv~~Le~ 34 (40)
T 1gp8_A 17 MDAAASKGDVETYRKLKA 34 (40)
T ss_dssp HHHHHTTSCHHHHHHHHH
T ss_pred HHHHHhcCCHHHHHHHHH
Confidence 345666666666666554
No 116
>3qil_A Clathrin heavy chain 1; clathrin trimerization domain, endocytosis, structural prote; 3.92A {Bos taurus}
Probab=31.04 E-value=32 Score=19.84 Aligned_cols=31 Identities=13% Similarity=0.136 Sum_probs=18.6
Q ss_pred CCCccccCCCcCHHHHHHHcCCHHHHHHHHhc
Q psy3338 79 NVNAVTRAGQATPLHRAASAANEEIVTLLLDN 110 (152)
Q Consensus 79 ~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~ 110 (152)
.+..+|... .-++..|+..++.++++-|+..
T Consensus 27 ~L~KkDkLy-kDAietAa~S~d~elaEeLL~y 57 (125)
T 3qil_A 27 ELAKKDSLY-KDAMQYASESKDTELAEELLQW 57 (125)
T ss_dssp CCCSCCCCS-SHHHHTTTSSCCSHHHHHHHHH
T ss_pred HHHHhcccH-HHHHHHHHHcCCHHHHHHHHHH
Confidence 334445444 4566777777777776666654
No 117
>2dag_A Ubiquitin carboxyl-terminal hydrolase 5; isopeptidase T, ubiquitin specific protease 5 (USP 5), UBA domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=30.74 E-value=42 Score=17.26 Aligned_cols=12 Identities=8% Similarity=0.238 Sum_probs=5.4
Q ss_pred HHHHHHHHhCCc
Q psy3338 135 KISQILLERFSD 146 (152)
Q Consensus 135 ~i~~~L~~~~~~ 146 (152)
.-++||+++..+
T Consensus 40 ~A~ewL~~~~~d 51 (74)
T 2dag_A 40 AAMNWVMSHMDD 51 (74)
T ss_dssp HHHHHHHHHTTS
T ss_pred HHHHHHHhCCCC
Confidence 344455544433
No 118
>1vek_A UBP14, ubiquitin-specific protease 14, putative; UBA domain, three helix bundle, ubiquitin associated domain, structural genomics; NMR {Arabidopsis thaliana} SCOP: a.5.2.1
Probab=23.85 E-value=50 Score=17.47 Aligned_cols=11 Identities=36% Similarity=0.489 Sum_probs=4.9
Q ss_pred HHHHHHHHhcC
Q psy3338 67 KPICLLLISRG 77 (152)
Q Consensus 67 ~~~~~~L~~~~ 77 (152)
.+.+..|++-|
T Consensus 30 e~~v~~L~~MG 40 (84)
T 1vek_A 30 EEIVAQLVSMG 40 (84)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHcC
Confidence 34444444443
Done!