Your job contains 1 sequence.
>psy3344
MVLFNLYDDWLKTISSYTAFSRLILILRALHSDLRWSKQTDVGITHFRSGMSHDEDQLIP
NLYRYIQPWESEFIDSQRVWAEYALKRQEANAQNRRLTLEDLEDSWDRGIPRINTLFQKD
RHTLAYDKGWRIRTEFKQYQDMNHTNSYGIIRGLQFASFIVQYYGLVLDLLVLGLQRASE
MAGPPQMPNDFLTFQDTATELAHPIRLYCRYVDKVHLFLRHTLAYDKGWRIRTEFKQYQV
LKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFCAYGN
WFPGSKPLIQQALAKIMKANPALYVLRERIRKALQLYSSEPTEPYLSSQNYGELFSNQII
WFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLA
FSRLILILRALHVNTERTKVILKPDKSTITEPHHIWPSLSDDEWIKVEVQLKDLILADYG
KKNNVNVASLTQSEIRDIILGMEISAPSAQRQQIAEIEKQTKEQSQLTATTTRTVNKHGD
EIITSTTSNYETATFGSKTEWRVRAISATNLHLRTNHIYVSSDDIKETGYTYILPKNVLK
KFVTISDLRAQIAGYLYGVSPADNPQVKEIRCIVMPPQWGTHQTVHLPASLPGHPYLKEM
EPLGWIHTQPNELPQLSPQDVTSHAKIMADNASWDGVRHDPNMKYDLQLANPKEFYHEIH
RPAHFLNFSSLEDGDGIVNKWNTALIGLMTYFRESVVNTQELLDLLVKCENKIQTRIKIG
LNSKMPSRFPPAVFDQELDALEIETVQKETIHPRKSYKMNSSCADVLLFAAYKWNVSRPS
LLADSKGKFPPVVFYTPKELGGLGMLSMGHVLIPQVRELFKYNWGFIYTVSLDFYDNMSH
YVNSMEISAPSAQRQQIAEIEKQTKEQSQLTATTTRTVNKHGDEIITSTTSNYETATFGS
KTEWRVRAISATNLHLRTNHIYVSSDDIKETGYTYILPKNVLKKFVTISDLRAQIAGYLY
DHLVCGRHERVSSDHTQDIRRQSDHQTFIFHSQIIWFVDDTNVYRVTIHKTFEGNLTTKP
INGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLGEKTVVITCSFTPGSCSLTAYKLTPS
GFEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQSSWNYNFMGVRHDPNMK
YDLQLANPKEFYHEIHRPAHFLNFSSLEDGDGVILKPDKSTITEPHHIWPSLSDDEWIKV
EVQLKDLILADYGKSRQSFSRI
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy3344
(1282 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|A7Z025 - symbol:PRPF8 "PRPF8 protein" species:9... 1330 0. 5
UNIPROTKB|E2R4X9 - symbol:PRPF8 "Uncharacterized protein"... 1330 0. 5
UNIPROTKB|Q6P2Q9 - symbol:PRPF8 "Pre-mRNA-processing-spli... 1330 0. 5
UNIPROTKB|F1RHH8 - symbol:PRPF8 "Uncharacterized protein"... 1330 0. 5
UNIPROTKB|E1BZT5 - symbol:PRPF8 "Uncharacterized protein"... 1329 0. 5
ZFIN|ZDB-GENE-030131-577 - symbol:prpf8 "pre-mRNA process... 1323 0. 5
WB|WBGene00004187 - symbol:prp-8 species:6239 "Caenorhabd... 1232 1.0e-309 6
MGI|MGI:2179381 - symbol:Prpf8 "pre-mRNA processing facto... 1330 1.8e-294 5
UNIPROTKB|G3V6H2 - symbol:Prpf8 "Pre-mRNA processing fact... 1330 1.8e-294 5
TAIR|locus:2141791 - symbol:AT4G38780 species:3702 "Arabi... 1116 1.1e-288 5
FB|FBgn0033688 - symbol:Prp8 "pre-mRNA processing factor ... 1341 1.7e-278 5
DICTYBASE|DDB_G0274229 - symbol:prpf8 "putative U5 small ... 1090 3.1e-273 5
POMBASE|SPAC4F8.12c - symbol:spp42 "U5 snRNP complex subu... 962 1.5e-242 5
UNIPROTKB|G4N5D4 - symbol:MGG_05244 "Pre-mRNA-processing-... 944 3.3e-233 5
ASPGD|ASPL0000077099 - symbol:prp8 species:162425 "Emeric... 966 1.9e-228 5
CGD|CAL0002209 - symbol:PRP8 species:5476 "Candida albica... 778 5.1e-196 5
SGD|S000001208 - symbol:PRP8 "Component of the U4/U6-U5 s... 669 3.5e-172 4
RGD|1305467 - symbol:Prpf8 "PRP8 pre-mRNA processing fact... 1330 2.3e-162 3
UNIPROTKB|I3L0J9 - symbol:PRPF8 "Pre-mRNA-processing-spli... 189 1.6e-10 1
>UNIPROTKB|A7Z025 [details] [associations]
symbol:PRPF8 "PRPF8 protein" species:9913 "Bos taurus"
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
InterPro:IPR000555 InterPro:IPR012591 InterPro:IPR012592
Pfam:PF01398 Pfam:PF08082 Pfam:PF08083 ProDom:PD149576
SMART:SM00232 GO:GO:0000398 GO:GO:0071013 eggNOG:COG5178
GeneTree:ENSGT00390000015210 HOGENOM:HOG000184103 KO:K12856
OMA:EEFTHRD InterPro:IPR012984 InterPro:IPR021983
InterPro:IPR019581 InterPro:IPR019580 InterPro:IPR019582
Pfam:PF08084 Pfam:PF12134 Pfam:PF10598 Pfam:PF10597 Pfam:PF10596
CTD:10594 HOVERGEN:HBG052796 OrthoDB:EOG45HRWF EMBL:DAAA02048662
EMBL:BC153223 IPI:IPI00687395 RefSeq:NP_001099108.1
UniGene:Bt.44664 SMR:A7Z025 STRING:A7Z025
Ensembl:ENSBTAT00000046260 GeneID:507371 KEGG:bta:507371
InParanoid:A7Z025 NextBio:20868029 Uniprot:A7Z025
Length = 2335
Score = 1330 (473.2 bits), Expect = 0., Sum P(5) = 0.
Identities = 254/277 (91%), Positives = 261/277 (94%)
Query: 420 AFSRLILILRALHVNTERTKVILKPDKSTITEPHHIWPSLSDDEWIKVEVQLKDLILADY 479
AFSRLILILRALHVN +R KVILKPDK+TITEPHHIWP+L+D+EWIKVEVQLKDLILADY
Sbjct: 1932 AFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWIKVEVQLKDLILADY 1991
Query: 480 GKKNNVNVASLTQSEIRDIILGMEISAPSAQRQQIAEIEKQTKEQSQLTATTTRTVNKHG 539
GKKNNVNVASLTQSEIRDIILGMEISAPS QRQQIAEIEKQTKEQSQLTAT TRTVNKHG
Sbjct: 1992 GKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQSQLTATQTRTVNKHG 2051
Query: 540 DEIITSTTSNYETATFGSKTEWRVRAISATNLHLRTNHIYVSSDDIKETGYTYILPKNVL 599
DEIITSTTSNYET TF SKTEWRVRAISA NLHLRTNHIYVSSDDIKETGYTYILPKNVL
Sbjct: 2052 DEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDIKETGYTYILPKNVL 2111
Query: 600 KKFVTISDLRAQIAGYLYGVSPADNPQVKEIRCIVMPPQWGTHQTVHLPASLPGHPYLKE 659
KKF+ ISDLRAQIAGYLYGVSP DNPQVKEIRCIVM PQWGTHQTVHLP LP H YLKE
Sbjct: 2112 KKFICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLPGQLPQHEYLKE 2171
Query: 660 MEPLGWIHTQPNELPQLSPQDVTSHAKIMADNASWDG 696
MEPLGWIHTQPNE PQLSPQDVT+HAKIMADN SWDG
Sbjct: 2172 MEPLGWIHTQPNESPQLSPQDVTTHAKIMADNPSWDG 2208
Score = 651 (234.2 bits), Expect = 0., Sum P(5) = 0.
Identities = 127/153 (83%), Positives = 136/153 (88%)
Query: 294 LFCAYGNWFPGSKPLIQQALAKIMKANPALYVLRERIRKALQLYSSEPTEPYLSSQNYGE 353
L AYGNWFPGSKPLIQQA+AKIMKANPALYVLRERIRK LQLYSSEPTEPYLSSQNYGE
Sbjct: 1711 LHSAYGNWFPGSKPLIQQAMAKIMKANPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGE 1770
Query: 354 LFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQ 413
LFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQ
Sbjct: 1771 LFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQ 1830
Query: 414 KRLGQLA----FSRLILILRALHVNTERTKVIL 442
KRLGQLA + ++R+L V + ++I+
Sbjct: 1831 KRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIV 1863
Score = 613 (220.8 bits), Expect = 0., Sum P(5) = 0.
Identities = 105/117 (89%), Positives = 116/117 (99%)
Query: 1115 GEKTVVITCSFTPGSCSLTAYKLTPSGFEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRF 1174
GEKT++ITCSFTPGSC+LTAYKLTPSG+EWGRQNTDKGNNPKGYLPSHYERVQMLLSDRF
Sbjct: 2208 GEKTIIITCSFTPGSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRF 2267
Query: 1175 LGFFMVPAQSSWNYNFMGVRHDPNMKYDLQLANPKEFYHEIHRPAHFLNFSSLEDGD 1231
LGFFMVPAQSSWNYNFMGVRHDPNMKY+LQLANPKEFYHE+HRP+HFLNF+ L++G+
Sbjct: 2268 LGFFMVPAQSSWNYNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQEGE 2324
Score = 575 (207.5 bits), Expect = 0., Sum P(4) = 0.
Identities = 105/109 (96%), Positives = 108/109 (99%)
Query: 32 SDLRWSKQTDVGITHFRSGMSHDEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAN 91
SDLRWSKQTDVGITHFRSGMSH+EDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEA
Sbjct: 1338 SDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAI 1397
Query: 92 AQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRIRTEFKQYQ 140
AQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWR+RT+FKQYQ
Sbjct: 1398 AQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRTDFKQYQ 1446
Score = 550 (198.7 bits), Expect = 6.8e-241, Sum P(5) = 6.8e-241
Identities = 109/116 (93%), Positives = 110/116 (94%)
Query: 905 MEISAPSAQRQQIAEIEKQTKEQSQLTATTTRTVNKHGDEIITSTTSNYETATFGSKTEW 964
MEISAPS QRQQIAEIEKQTKEQSQLTAT TRTVNKHGDEIITSTTSNYET TF SKTEW
Sbjct: 2014 MEISAPSQQRQQIAEIEKQTKEQSQLTATQTRTVNKHGDEIITSTTSNYETQTFSSKTEW 2073
Query: 965 RVRAISATNLHLRTNHIYVSSDDIKETGYTYILPKNVLKKFVTISDLRAQIAGYLY 1020
RVRAISA NLHLRTNHIYVSSDDIKETGYTYILPKNVLKKF+ ISDLRAQIAGYLY
Sbjct: 2074 RVRAISAANLHLRTNHIYVSSDDIKETGYTYILPKNVLKKFICISDLRAQIAGYLY 2129
Score = 435 (158.2 bits), Expect = 0., Sum P(5) = 0.
Identities = 76/86 (88%), Positives = 79/86 (91%)
Query: 220 RHTLAYDKGWRIRTEFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILE 279
RHTLAYDKGWR+RT+FKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILE
Sbjct: 1427 RHTLAYDKGWRVRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILE 1486
Query: 280 HTLFKGTYFPTWEGLFCAYGNWFPGS 305
HTLFKGTYFPTWEGLF + F S
Sbjct: 1487 HTLFKGTYFPTWEGLFWEKASGFEES 1512
Score = 341 (125.1 bits), Expect = 1.0e-178, Sum P(5) = 1.0e-178
Identities = 68/88 (77%), Positives = 75/88 (85%)
Query: 1032 SSDHTQDIRRQSDHQTFIFHSQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPR 1091
SS+ T+ ++ +F +QIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPR
Sbjct: 1755 SSEPTEPYLSSQNYGE-LFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPR 1813
Query: 1092 TGQLFLKIIHTSVWAGQKRLGQLGE-KT 1118
TGQLFLKIIHTSVWAGQKRLGQL + KT
Sbjct: 1814 TGQLFLKIIHTSVWAGQKRLGQLAKWKT 1841
Score = 336 (123.3 bits), Expect = 0., Sum P(5) = 0.
Identities = 61/84 (72%), Positives = 68/84 (80%)
Query: 139 YQDMNHTNSYGIIRGLQFASFIVQYYXXXXXXXXXXXQRASEMAGPPQMPNDFLTFQDTA 198
Y+DMNHTNSYGIIRGLQFASFIVQYY RASEMAGPPQMPNDFL+FQD A
Sbjct: 1019 YKDMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDIA 1078
Query: 199 TELAHPIRLYCRYVDKVHLFLRHT 222
TE AHPIRL+CRY+D++H+F R T
Sbjct: 1079 TEAAHPIRLFCRYIDRIHIFFRFT 1102
Score = 291 (107.5 bits), Expect = 1.5e-185, Sum P(5) = 1.5e-185
Identities = 59/67 (88%), Positives = 61/67 (91%)
Query: 737 IVNKWNTALIGLMTYFRESVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPAVF-- 794
IVNKWNTALIGLMTYFRE+VVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPP VF
Sbjct: 1259 IVNKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYT 1318
Query: 795 DQELDAL 801
+EL L
Sbjct: 1319 PKELGGL 1325
Score = 272 (100.8 bits), Expect = 1.1e-200, Sum P(5) = 1.1e-200
Identities = 52/54 (96%), Positives = 54/54 (100%)
Query: 793 VFDQELDALEIETVQKETIHPRKSYKMNSSCADVLLFAAYKWNVSRPSLLADSK 846
VFDQELDALEIETVQKETIHPRKSYKMNSSCAD+LLFA+YKWNVSRPSLLADSK
Sbjct: 1596 VFDQELDALEIETVQKETIHPRKSYKMNSSCADILLFASYKWNVSRPSLLADSK 1649
Score = 212 (79.7 bits), Expect = 4.7e-146, Sum P(4) = 4.7e-146
Identities = 38/42 (90%), Positives = 42/42 (100%)
Query: 1233 VILKPDKSTITEPHHIWPSLSDDEWIKVEVQLKDLILADYGK 1274
VILKPDK+TITEPHHIWP+L+D+EWIKVEVQLKDLILADYGK
Sbjct: 1952 VILKPDKTTITEPHHIWPTLTDEEWIKVEVQLKDLILADYGK 1993
Score = 199 (75.1 bits), Expect = 1.8e-294, Sum P(5) = 1.8e-294
Identities = 33/45 (73%), Positives = 42/45 (93%)
Query: 691 NASWDGVRHDPNMKYDLQLANPKEFYHEIHRPAHFLNFSSLEDGD 735
N ++ GVRHDPNMKY+LQLANPKEFYHE+HRP+HFLNF+ L++G+
Sbjct: 2280 NYNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQEGE 2324
Score = 157 (60.3 bits), Expect = 1.3e-209, Sum P(3) = 1.3e-209
Identities = 31/31 (100%), Positives = 31/31 (100%)
Query: 1 MVLFNLYDDWLKTISSYTAFSRLILILRALH 31
MVLFNLYDDWLKTISSYTAFSRLILILRALH
Sbjct: 1914 MVLFNLYDDWLKTISSYTAFSRLILILRALH 1944
Score = 149 (57.5 bits), Expect = 3.0e-147, Sum P(4) = 3.0e-147
Identities = 34/54 (62%), Positives = 37/54 (68%)
Query: 848 KFPPVVFYTPKELGGLGMLSMGHVLIPQVRELFKYNWGFIYTVSLD-FYDNMSH 900
+FPPVVFYTPKELGGLGMLSMGHVLIPQ +L W V + F MSH
Sbjct: 1310 RFPPVVFYTPKELGGLGMLSMGHVLIPQ-SDL---RWSKQTDVGITHFRSGMSH 1359
Score = 48 (22.0 bits), Expect = 3.8e-177, Sum P(5) = 3.8e-177
Identities = 16/45 (35%), Positives = 24/45 (53%)
Query: 410 W-AGQKRLGQLAFSRLILILRALHVNTERTKVILKPDKSTITEPH 453
W G K L Q A ++++ AL+V ER + L+ S TEP+
Sbjct: 1718 WFPGSKPLIQQAMAKIMKANPALYVLRERIRKGLQLYSSEPTEPY 1762
>UNIPROTKB|E2R4X9 [details] [associations]
symbol:PRPF8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA] InterPro:IPR000555 InterPro:IPR012591
InterPro:IPR012592 Pfam:PF01398 Pfam:PF08082 Pfam:PF08083
ProDom:PD149576 SMART:SM00232 GO:GO:0000398 GO:GO:0071013
GeneTree:ENSGT00390000015210 KO:K12856 OMA:EEFTHRD
InterPro:IPR012984 InterPro:IPR021983 InterPro:IPR019581
InterPro:IPR019580 InterPro:IPR019582 Pfam:PF08084 Pfam:PF12134
Pfam:PF10598 Pfam:PF10597 Pfam:PF10596 CTD:10594 EMBL:AAEX03006697
EMBL:AAEX03006696 RefSeq:XP_854384.1 ProteinModelPortal:E2R4X9
Ensembl:ENSCAFT00000030519 GeneID:480651 KEGG:cfa:480651
Uniprot:E2R4X9
Length = 2335
Score = 1330 (473.2 bits), Expect = 0., Sum P(5) = 0.
Identities = 254/277 (91%), Positives = 261/277 (94%)
Query: 420 AFSRLILILRALHVNTERTKVILKPDKSTITEPHHIWPSLSDDEWIKVEVQLKDLILADY 479
AFSRLILILRALHVN +R KVILKPDK+TITEPHHIWP+L+D+EWIKVEVQLKDLILADY
Sbjct: 1932 AFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWIKVEVQLKDLILADY 1991
Query: 480 GKKNNVNVASLTQSEIRDIILGMEISAPSAQRQQIAEIEKQTKEQSQLTATTTRTVNKHG 539
GKKNNVNVASLTQSEIRDIILGMEISAPS QRQQIAEIEKQTKEQSQLTAT TRTVNKHG
Sbjct: 1992 GKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQSQLTATQTRTVNKHG 2051
Query: 540 DEIITSTTSNYETATFGSKTEWRVRAISATNLHLRTNHIYVSSDDIKETGYTYILPKNVL 599
DEIITSTTSNYET TF SKTEWRVRAISA NLHLRTNHIYVSSDDIKETGYTYILPKNVL
Sbjct: 2052 DEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDIKETGYTYILPKNVL 2111
Query: 600 KKFVTISDLRAQIAGYLYGVSPADNPQVKEIRCIVMPPQWGTHQTVHLPASLPGHPYLKE 659
KKF+ ISDLRAQIAGYLYGVSP DNPQVKEIRCIVM PQWGTHQTVHLP LP H YLKE
Sbjct: 2112 KKFICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLPGQLPQHEYLKE 2171
Query: 660 MEPLGWIHTQPNELPQLSPQDVTSHAKIMADNASWDG 696
MEPLGWIHTQPNE PQLSPQDVT+HAKIMADN SWDG
Sbjct: 2172 MEPLGWIHTQPNESPQLSPQDVTTHAKIMADNPSWDG 2208
Score = 651 (234.2 bits), Expect = 0., Sum P(5) = 0.
Identities = 127/153 (83%), Positives = 136/153 (88%)
Query: 294 LFCAYGNWFPGSKPLIQQALAKIMKANPALYVLRERIRKALQLYSSEPTEPYLSSQNYGE 353
L AYGNWFPGSKPLIQQA+AKIMKANPALYVLRERIRK LQLYSSEPTEPYLSSQNYGE
Sbjct: 1711 LHSAYGNWFPGSKPLIQQAMAKIMKANPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGE 1770
Query: 354 LFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQ 413
LFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQ
Sbjct: 1771 LFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQ 1830
Query: 414 KRLGQLA----FSRLILILRALHVNTERTKVIL 442
KRLGQLA + ++R+L V + ++I+
Sbjct: 1831 KRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIV 1863
Score = 613 (220.8 bits), Expect = 0., Sum P(5) = 0.
Identities = 105/117 (89%), Positives = 116/117 (99%)
Query: 1115 GEKTVVITCSFTPGSCSLTAYKLTPSGFEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRF 1174
GEKT++ITCSFTPGSC+LTAYKLTPSG+EWGRQNTDKGNNPKGYLPSHYERVQMLLSDRF
Sbjct: 2208 GEKTIIITCSFTPGSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRF 2267
Query: 1175 LGFFMVPAQSSWNYNFMGVRHDPNMKYDLQLANPKEFYHEIHRPAHFLNFSSLEDGD 1231
LGFFMVPAQSSWNYNFMGVRHDPNMKY+LQLANPKEFYHE+HRP+HFLNF+ L++G+
Sbjct: 2268 LGFFMVPAQSSWNYNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQEGE 2324
Score = 575 (207.5 bits), Expect = 0., Sum P(4) = 0.
Identities = 105/109 (96%), Positives = 108/109 (99%)
Query: 32 SDLRWSKQTDVGITHFRSGMSHDEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAN 91
SDLRWSKQTDVGITHFRSGMSH+EDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEA
Sbjct: 1338 SDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAI 1397
Query: 92 AQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRIRTEFKQYQ 140
AQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWR+RT+FKQYQ
Sbjct: 1398 AQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRTDFKQYQ 1446
Score = 550 (198.7 bits), Expect = 6.8e-241, Sum P(5) = 6.8e-241
Identities = 109/116 (93%), Positives = 110/116 (94%)
Query: 905 MEISAPSAQRQQIAEIEKQTKEQSQLTATTTRTVNKHGDEIITSTTSNYETATFGSKTEW 964
MEISAPS QRQQIAEIEKQTKEQSQLTAT TRTVNKHGDEIITSTTSNYET TF SKTEW
Sbjct: 2014 MEISAPSQQRQQIAEIEKQTKEQSQLTATQTRTVNKHGDEIITSTTSNYETQTFSSKTEW 2073
Query: 965 RVRAISATNLHLRTNHIYVSSDDIKETGYTYILPKNVLKKFVTISDLRAQIAGYLY 1020
RVRAISA NLHLRTNHIYVSSDDIKETGYTYILPKNVLKKF+ ISDLRAQIAGYLY
Sbjct: 2074 RVRAISAANLHLRTNHIYVSSDDIKETGYTYILPKNVLKKFICISDLRAQIAGYLY 2129
Score = 435 (158.2 bits), Expect = 0., Sum P(5) = 0.
Identities = 76/86 (88%), Positives = 79/86 (91%)
Query: 220 RHTLAYDKGWRIRTEFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILE 279
RHTLAYDKGWR+RT+FKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILE
Sbjct: 1427 RHTLAYDKGWRVRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILE 1486
Query: 280 HTLFKGTYFPTWEGLFCAYGNWFPGS 305
HTLFKGTYFPTWEGLF + F S
Sbjct: 1487 HTLFKGTYFPTWEGLFWEKASGFEES 1512
Score = 341 (125.1 bits), Expect = 1.0e-178, Sum P(5) = 1.0e-178
Identities = 68/88 (77%), Positives = 75/88 (85%)
Query: 1032 SSDHTQDIRRQSDHQTFIFHSQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPR 1091
SS+ T+ ++ +F +QIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPR
Sbjct: 1755 SSEPTEPYLSSQNYGE-LFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPR 1813
Query: 1092 TGQLFLKIIHTSVWAGQKRLGQLGE-KT 1118
TGQLFLKIIHTSVWAGQKRLGQL + KT
Sbjct: 1814 TGQLFLKIIHTSVWAGQKRLGQLAKWKT 1841
Score = 336 (123.3 bits), Expect = 0., Sum P(5) = 0.
Identities = 61/84 (72%), Positives = 68/84 (80%)
Query: 139 YQDMNHTNSYGIIRGLQFASFIVQYYXXXXXXXXXXXQRASEMAGPPQMPNDFLTFQDTA 198
Y+DMNHTNSYGIIRGLQFASFIVQYY RASEMAGPPQMPNDFL+FQD A
Sbjct: 1019 YKDMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDIA 1078
Query: 199 TELAHPIRLYCRYVDKVHLFLRHT 222
TE AHPIRL+CRY+D++H+F R T
Sbjct: 1079 TEAAHPIRLFCRYIDRIHIFFRFT 1102
Score = 291 (107.5 bits), Expect = 1.5e-185, Sum P(5) = 1.5e-185
Identities = 59/67 (88%), Positives = 61/67 (91%)
Query: 737 IVNKWNTALIGLMTYFRESVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPAVF-- 794
IVNKWNTALIGLMTYFRE+VVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPP VF
Sbjct: 1259 IVNKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYT 1318
Query: 795 DQELDAL 801
+EL L
Sbjct: 1319 PKELGGL 1325
Score = 272 (100.8 bits), Expect = 1.1e-200, Sum P(5) = 1.1e-200
Identities = 52/54 (96%), Positives = 54/54 (100%)
Query: 793 VFDQELDALEIETVQKETIHPRKSYKMNSSCADVLLFAAYKWNVSRPSLLADSK 846
VFDQELDALEIETVQKETIHPRKSYKMNSSCAD+LLFA+YKWNVSRPSLLADSK
Sbjct: 1596 VFDQELDALEIETVQKETIHPRKSYKMNSSCADILLFASYKWNVSRPSLLADSK 1649
Score = 212 (79.7 bits), Expect = 4.7e-146, Sum P(4) = 4.7e-146
Identities = 38/42 (90%), Positives = 42/42 (100%)
Query: 1233 VILKPDKSTITEPHHIWPSLSDDEWIKVEVQLKDLILADYGK 1274
VILKPDK+TITEPHHIWP+L+D+EWIKVEVQLKDLILADYGK
Sbjct: 1952 VILKPDKTTITEPHHIWPTLTDEEWIKVEVQLKDLILADYGK 1993
Score = 199 (75.1 bits), Expect = 1.8e-294, Sum P(5) = 1.8e-294
Identities = 33/45 (73%), Positives = 42/45 (93%)
Query: 691 NASWDGVRHDPNMKYDLQLANPKEFYHEIHRPAHFLNFSSLEDGD 735
N ++ GVRHDPNMKY+LQLANPKEFYHE+HRP+HFLNF+ L++G+
Sbjct: 2280 NYNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQEGE 2324
Score = 157 (60.3 bits), Expect = 1.3e-209, Sum P(3) = 1.3e-209
Identities = 31/31 (100%), Positives = 31/31 (100%)
Query: 1 MVLFNLYDDWLKTISSYTAFSRLILILRALH 31
MVLFNLYDDWLKTISSYTAFSRLILILRALH
Sbjct: 1914 MVLFNLYDDWLKTISSYTAFSRLILILRALH 1944
Score = 149 (57.5 bits), Expect = 3.0e-147, Sum P(4) = 3.0e-147
Identities = 34/54 (62%), Positives = 37/54 (68%)
Query: 848 KFPPVVFYTPKELGGLGMLSMGHVLIPQVRELFKYNWGFIYTVSLD-FYDNMSH 900
+FPPVVFYTPKELGGLGMLSMGHVLIPQ +L W V + F MSH
Sbjct: 1310 RFPPVVFYTPKELGGLGMLSMGHVLIPQ-SDL---RWSKQTDVGITHFRSGMSH 1359
Score = 48 (22.0 bits), Expect = 3.8e-177, Sum P(5) = 3.8e-177
Identities = 16/45 (35%), Positives = 24/45 (53%)
Query: 410 W-AGQKRLGQLAFSRLILILRALHVNTERTKVILKPDKSTITEPH 453
W G K L Q A ++++ AL+V ER + L+ S TEP+
Sbjct: 1718 WFPGSKPLIQQAMAKIMKANPALYVLRERIRKGLQLYSSEPTEPY 1762
>UNIPROTKB|Q6P2Q9 [details] [associations]
symbol:PRPF8 "Pre-mRNA-processing-splicing factor 8"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=TAS] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006397 "mRNA processing" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] Reactome:REACT_71 InterPro:IPR000555
InterPro:IPR012591 InterPro:IPR012592 Pfam:PF01398 Pfam:PF08082
Pfam:PF08083 ProDom:PD149576 SMART:SM00232 EMBL:AF092565
GO:GO:0005654 GO:GO:0016607 Reactome:REACT_1675 GO:GO:0005682
GO:GO:0003723 Orphanet:791 GO:GO:0000398 GO:GO:0071013
eggNOG:COG5178 HOGENOM:HOG000184103 KO:K12856 OMA:EEFTHRD
InterPro:IPR012984 InterPro:IPR021983 InterPro:IPR019581
InterPro:IPR019580 InterPro:IPR019582 Pfam:PF08084 Pfam:PF12134
Pfam:PF10598 Pfam:PF10597 Pfam:PF10596 EMBL:AB007510 EMBL:BC064370
IPI:IPI00007928 RefSeq:NP_006436.3 UniGene:Hs.181368 PDB:3E9L
PDB:3ENB PDB:3LRU PDBsum:3E9L PDBsum:3ENB PDBsum:3LRU
ProteinModelPortal:Q6P2Q9 SMR:Q6P2Q9 DIP:DIP-29614N IntAct:Q6P2Q9
MINT:MINT-1131724 STRING:Q6P2Q9 PhosphoSite:Q6P2Q9 DMDM:67460824
PaxDb:Q6P2Q9 PeptideAtlas:Q6P2Q9 PRIDE:Q6P2Q9 DNASU:10594
Ensembl:ENST00000304992 Ensembl:ENST00000572621 GeneID:10594
KEGG:hsa:10594 UCSC:uc002fte.3 CTD:10594 GeneCards:GC17M001553
HGNC:HGNC:17340 HPA:CAB009941 HPA:CAB015457 MIM:600059 MIM:607300
neXtProt:NX_Q6P2Q9 PharmGKB:PA33815 HOVERGEN:HBG052796
InParanoid:Q6P2Q9 OrthoDB:EOG45HRWF ChiTaRS:PRPF8
EvolutionaryTrace:Q6P2Q9 GenomeRNAi:10594 NextBio:40233
ArrayExpress:Q6P2Q9 Bgee:Q6P2Q9 CleanEx:HS_PRPF8
Genevestigator:Q6P2Q9 GermOnline:ENSG00000174231 Uniprot:Q6P2Q9
Length = 2335
Score = 1330 (473.2 bits), Expect = 0., Sum P(5) = 0.
Identities = 254/277 (91%), Positives = 261/277 (94%)
Query: 420 AFSRLILILRALHVNTERTKVILKPDKSTITEPHHIWPSLSDDEWIKVEVQLKDLILADY 479
AFSRLILILRALHVN +R KVILKPDK+TITEPHHIWP+L+D+EWIKVEVQLKDLILADY
Sbjct: 1932 AFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWIKVEVQLKDLILADY 1991
Query: 480 GKKNNVNVASLTQSEIRDIILGMEISAPSAQRQQIAEIEKQTKEQSQLTATTTRTVNKHG 539
GKKNNVNVASLTQSEIRDIILGMEISAPS QRQQIAEIEKQTKEQSQLTAT TRTVNKHG
Sbjct: 1992 GKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQSQLTATQTRTVNKHG 2051
Query: 540 DEIITSTTSNYETATFGSKTEWRVRAISATNLHLRTNHIYVSSDDIKETGYTYILPKNVL 599
DEIITSTTSNYET TF SKTEWRVRAISA NLHLRTNHIYVSSDDIKETGYTYILPKNVL
Sbjct: 2052 DEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDIKETGYTYILPKNVL 2111
Query: 600 KKFVTISDLRAQIAGYLYGVSPADNPQVKEIRCIVMPPQWGTHQTVHLPASLPGHPYLKE 659
KKF+ ISDLRAQIAGYLYGVSP DNPQVKEIRCIVM PQWGTHQTVHLP LP H YLKE
Sbjct: 2112 KKFICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLPGQLPQHEYLKE 2171
Query: 660 MEPLGWIHTQPNELPQLSPQDVTSHAKIMADNASWDG 696
MEPLGWIHTQPNE PQLSPQDVT+HAKIMADN SWDG
Sbjct: 2172 MEPLGWIHTQPNESPQLSPQDVTTHAKIMADNPSWDG 2208
Score = 651 (234.2 bits), Expect = 0., Sum P(5) = 0.
Identities = 127/153 (83%), Positives = 136/153 (88%)
Query: 294 LFCAYGNWFPGSKPLIQQALAKIMKANPALYVLRERIRKALQLYSSEPTEPYLSSQNYGE 353
L AYGNWFPGSKPLIQQA+AKIMKANPALYVLRERIRK LQLYSSEPTEPYLSSQNYGE
Sbjct: 1711 LHSAYGNWFPGSKPLIQQAMAKIMKANPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGE 1770
Query: 354 LFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQ 413
LFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQ
Sbjct: 1771 LFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQ 1830
Query: 414 KRLGQLA----FSRLILILRALHVNTERTKVIL 442
KRLGQLA + ++R+L V + ++I+
Sbjct: 1831 KRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIV 1863
Score = 613 (220.8 bits), Expect = 0., Sum P(5) = 0.
Identities = 105/117 (89%), Positives = 116/117 (99%)
Query: 1115 GEKTVVITCSFTPGSCSLTAYKLTPSGFEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRF 1174
GEKT++ITCSFTPGSC+LTAYKLTPSG+EWGRQNTDKGNNPKGYLPSHYERVQMLLSDRF
Sbjct: 2208 GEKTIIITCSFTPGSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRF 2267
Query: 1175 LGFFMVPAQSSWNYNFMGVRHDPNMKYDLQLANPKEFYHEIHRPAHFLNFSSLEDGD 1231
LGFFMVPAQSSWNYNFMGVRHDPNMKY+LQLANPKEFYHE+HRP+HFLNF+ L++G+
Sbjct: 2268 LGFFMVPAQSSWNYNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQEGE 2324
Score = 575 (207.5 bits), Expect = 0., Sum P(4) = 0.
Identities = 105/109 (96%), Positives = 108/109 (99%)
Query: 32 SDLRWSKQTDVGITHFRSGMSHDEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAN 91
SDLRWSKQTDVGITHFRSGMSH+EDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEA
Sbjct: 1338 SDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAI 1397
Query: 92 AQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRIRTEFKQYQ 140
AQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWR+RT+FKQYQ
Sbjct: 1398 AQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRTDFKQYQ 1446
Score = 550 (198.7 bits), Expect = 6.8e-241, Sum P(5) = 6.8e-241
Identities = 109/116 (93%), Positives = 110/116 (94%)
Query: 905 MEISAPSAQRQQIAEIEKQTKEQSQLTATTTRTVNKHGDEIITSTTSNYETATFGSKTEW 964
MEISAPS QRQQIAEIEKQTKEQSQLTAT TRTVNKHGDEIITSTTSNYET TF SKTEW
Sbjct: 2014 MEISAPSQQRQQIAEIEKQTKEQSQLTATQTRTVNKHGDEIITSTTSNYETQTFSSKTEW 2073
Query: 965 RVRAISATNLHLRTNHIYVSSDDIKETGYTYILPKNVLKKFVTISDLRAQIAGYLY 1020
RVRAISA NLHLRTNHIYVSSDDIKETGYTYILPKNVLKKF+ ISDLRAQIAGYLY
Sbjct: 2074 RVRAISAANLHLRTNHIYVSSDDIKETGYTYILPKNVLKKFICISDLRAQIAGYLY 2129
Score = 435 (158.2 bits), Expect = 0., Sum P(5) = 0.
Identities = 76/86 (88%), Positives = 79/86 (91%)
Query: 220 RHTLAYDKGWRIRTEFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILE 279
RHTLAYDKGWR+RT+FKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILE
Sbjct: 1427 RHTLAYDKGWRVRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILE 1486
Query: 280 HTLFKGTYFPTWEGLFCAYGNWFPGS 305
HTLFKGTYFPTWEGLF + F S
Sbjct: 1487 HTLFKGTYFPTWEGLFWEKASGFEES 1512
Score = 341 (125.1 bits), Expect = 1.0e-178, Sum P(5) = 1.0e-178
Identities = 68/88 (77%), Positives = 75/88 (85%)
Query: 1032 SSDHTQDIRRQSDHQTFIFHSQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPR 1091
SS+ T+ ++ +F +QIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPR
Sbjct: 1755 SSEPTEPYLSSQNYGE-LFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPR 1813
Query: 1092 TGQLFLKIIHTSVWAGQKRLGQLGE-KT 1118
TGQLFLKIIHTSVWAGQKRLGQL + KT
Sbjct: 1814 TGQLFLKIIHTSVWAGQKRLGQLAKWKT 1841
Score = 336 (123.3 bits), Expect = 0., Sum P(5) = 0.
Identities = 61/84 (72%), Positives = 68/84 (80%)
Query: 139 YQDMNHTNSYGIIRGLQFASFIVQYYXXXXXXXXXXXQRASEMAGPPQMPNDFLTFQDTA 198
Y+DMNHTNSYGIIRGLQFASFIVQYY RASEMAGPPQMPNDFL+FQD A
Sbjct: 1019 YKDMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDIA 1078
Query: 199 TELAHPIRLYCRYVDKVHLFLRHT 222
TE AHPIRL+CRY+D++H+F R T
Sbjct: 1079 TEAAHPIRLFCRYIDRIHIFFRFT 1102
Score = 291 (107.5 bits), Expect = 1.5e-185, Sum P(5) = 1.5e-185
Identities = 59/67 (88%), Positives = 61/67 (91%)
Query: 737 IVNKWNTALIGLMTYFRESVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPAVF-- 794
IVNKWNTALIGLMTYFRE+VVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPP VF
Sbjct: 1259 IVNKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYT 1318
Query: 795 DQELDAL 801
+EL L
Sbjct: 1319 PKELGGL 1325
Score = 272 (100.8 bits), Expect = 1.1e-200, Sum P(5) = 1.1e-200
Identities = 52/54 (96%), Positives = 54/54 (100%)
Query: 793 VFDQELDALEIETVQKETIHPRKSYKMNSSCADVLLFAAYKWNVSRPSLLADSK 846
VFDQELDALEIETVQKETIHPRKSYKMNSSCAD+LLFA+YKWNVSRPSLLADSK
Sbjct: 1596 VFDQELDALEIETVQKETIHPRKSYKMNSSCADILLFASYKWNVSRPSLLADSK 1649
Score = 212 (79.7 bits), Expect = 4.7e-146, Sum P(4) = 4.7e-146
Identities = 38/42 (90%), Positives = 42/42 (100%)
Query: 1233 VILKPDKSTITEPHHIWPSLSDDEWIKVEVQLKDLILADYGK 1274
VILKPDK+TITEPHHIWP+L+D+EWIKVEVQLKDLILADYGK
Sbjct: 1952 VILKPDKTTITEPHHIWPTLTDEEWIKVEVQLKDLILADYGK 1993
Score = 199 (75.1 bits), Expect = 1.8e-294, Sum P(5) = 1.8e-294
Identities = 33/45 (73%), Positives = 42/45 (93%)
Query: 691 NASWDGVRHDPNMKYDLQLANPKEFYHEIHRPAHFLNFSSLEDGD 735
N ++ GVRHDPNMKY+LQLANPKEFYHE+HRP+HFLNF+ L++G+
Sbjct: 2280 NYNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQEGE 2324
Score = 157 (60.3 bits), Expect = 1.3e-209, Sum P(3) = 1.3e-209
Identities = 31/31 (100%), Positives = 31/31 (100%)
Query: 1 MVLFNLYDDWLKTISSYTAFSRLILILRALH 31
MVLFNLYDDWLKTISSYTAFSRLILILRALH
Sbjct: 1914 MVLFNLYDDWLKTISSYTAFSRLILILRALH 1944
Score = 149 (57.5 bits), Expect = 3.0e-147, Sum P(4) = 3.0e-147
Identities = 34/54 (62%), Positives = 37/54 (68%)
Query: 848 KFPPVVFYTPKELGGLGMLSMGHVLIPQVRELFKYNWGFIYTVSLD-FYDNMSH 900
+FPPVVFYTPKELGGLGMLSMGHVLIPQ +L W V + F MSH
Sbjct: 1310 RFPPVVFYTPKELGGLGMLSMGHVLIPQ-SDL---RWSKQTDVGITHFRSGMSH 1359
Score = 48 (22.0 bits), Expect = 3.8e-177, Sum P(5) = 3.8e-177
Identities = 16/45 (35%), Positives = 24/45 (53%)
Query: 410 W-AGQKRLGQLAFSRLILILRALHVNTERTKVILKPDKSTITEPH 453
W G K L Q A ++++ AL+V ER + L+ S TEP+
Sbjct: 1718 WFPGSKPLIQQAMAKIMKANPALYVLRERIRKGLQLYSSEPTEPY 1762
>UNIPROTKB|F1RHH8 [details] [associations]
symbol:PRPF8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
InterPro:IPR000555 InterPro:IPR012591 InterPro:IPR012592
Pfam:PF01398 Pfam:PF08082 Pfam:PF08083 ProDom:PD149576
SMART:SM00232 GO:GO:0005681 GO:GO:0000398
GeneTree:ENSGT00390000015210 OMA:EEFTHRD InterPro:IPR012984
InterPro:IPR021983 InterPro:IPR019581 InterPro:IPR019580
InterPro:IPR019582 Pfam:PF08084 Pfam:PF12134 Pfam:PF10598
Pfam:PF10597 Pfam:PF10596 EMBL:FP312656 Ensembl:ENSSSCT00000019391
Uniprot:F1RHH8
Length = 2240
Score = 1330 (473.2 bits), Expect = 0., Sum P(5) = 0.
Identities = 254/277 (91%), Positives = 261/277 (94%)
Query: 420 AFSRLILILRALHVNTERTKVILKPDKSTITEPHHIWPSLSDDEWIKVEVQLKDLILADY 479
AFSRLILILRALHVN +R KVILKPDK+TITEPHHIWP+L+D+EWIKVEVQLKDLILADY
Sbjct: 1835 AFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWIKVEVQLKDLILADY 1894
Query: 480 GKKNNVNVASLTQSEIRDIILGMEISAPSAQRQQIAEIEKQTKEQSQLTATTTRTVNKHG 539
GKKNNVNVASLTQSEIRDIILGMEISAPS QRQQIAEIEKQTKEQSQLTAT TRTVNKHG
Sbjct: 1895 GKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQSQLTATQTRTVNKHG 1954
Query: 540 DEIITSTTSNYETATFGSKTEWRVRAISATNLHLRTNHIYVSSDDIKETGYTYILPKNVL 599
DEIITSTTSNYET TF SKTEWRVRAISA NLHLRTNHIYVSSDDIKETGYTYILPKNVL
Sbjct: 1955 DEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDIKETGYTYILPKNVL 2014
Query: 600 KKFVTISDLRAQIAGYLYGVSPADNPQVKEIRCIVMPPQWGTHQTVHLPASLPGHPYLKE 659
KKF+ ISDLRAQIAGYLYGVSP DNPQVKEIRCIVM PQWGTHQTVHLP LP H YLKE
Sbjct: 2015 KKFICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLPGQLPQHEYLKE 2074
Query: 660 MEPLGWIHTQPNELPQLSPQDVTSHAKIMADNASWDG 696
MEPLGWIHTQPNE PQLSPQDVT+HAKIMADN SWDG
Sbjct: 2075 MEPLGWIHTQPNESPQLSPQDVTTHAKIMADNPSWDG 2111
Score = 651 (234.2 bits), Expect = 0., Sum P(5) = 0.
Identities = 127/153 (83%), Positives = 136/153 (88%)
Query: 294 LFCAYGNWFPGSKPLIQQALAKIMKANPALYVLRERIRKALQLYSSEPTEPYLSSQNYGE 353
L AYGNWFPGSKPLIQQA+AKIMKANPALYVLRERIRK LQLYSSEPTEPYLSSQNYGE
Sbjct: 1614 LHSAYGNWFPGSKPLIQQAMAKIMKANPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGE 1673
Query: 354 LFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQ 413
LFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQ
Sbjct: 1674 LFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQ 1733
Query: 414 KRLGQLA----FSRLILILRALHVNTERTKVIL 442
KRLGQLA + ++R+L V + ++I+
Sbjct: 1734 KRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIV 1766
Score = 602 (217.0 bits), Expect = 0., Sum P(5) = 0.
Identities = 105/119 (88%), Positives = 116/119 (97%)
Query: 1115 GEKTVVITCSFTPGSCSLTAYKLTPSGFEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRF 1174
GEKT++ITCSFTPGSC+LTAYKLTPSG+EWGRQNTDKGNNPKGYLPSHYERVQMLLSDRF
Sbjct: 2111 GEKTIIITCSFTPGSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRF 2170
Query: 1175 LGFFMVPAQSSWNYNFM--GVRHDPNMKYDLQLANPKEFYHEIHRPAHFLNFSSLEDGD 1231
LGFFMVPAQSSWNYNFM GVRHDPNMKY+LQLANPKEFYHE+HRP+HFLNF+ L++G+
Sbjct: 2171 LGFFMVPAQSSWNYNFMVQGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQEGE 2229
Score = 575 (207.5 bits), Expect = 0., Sum P(4) = 0.
Identities = 105/109 (96%), Positives = 108/109 (99%)
Query: 32 SDLRWSKQTDVGITHFRSGMSHDEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAN 91
SDLRWSKQTDVGITHFRSGMSH+EDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEA
Sbjct: 1241 SDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAI 1300
Query: 92 AQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRIRTEFKQYQ 140
AQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWR+RT+FKQYQ
Sbjct: 1301 AQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRTDFKQYQ 1349
Score = 550 (198.7 bits), Expect = 7.0e-240, Sum P(5) = 7.0e-240
Identities = 109/116 (93%), Positives = 110/116 (94%)
Query: 905 MEISAPSAQRQQIAEIEKQTKEQSQLTATTTRTVNKHGDEIITSTTSNYETATFGSKTEW 964
MEISAPS QRQQIAEIEKQTKEQSQLTAT TRTVNKHGDEIITSTTSNYET TF SKTEW
Sbjct: 1917 MEISAPSQQRQQIAEIEKQTKEQSQLTATQTRTVNKHGDEIITSTTSNYETQTFSSKTEW 1976
Query: 965 RVRAISATNLHLRTNHIYVSSDDIKETGYTYILPKNVLKKFVTISDLRAQIAGYLY 1020
RVRAISA NLHLRTNHIYVSSDDIKETGYTYILPKNVLKKF+ ISDLRAQIAGYLY
Sbjct: 1977 RVRAISAANLHLRTNHIYVSSDDIKETGYTYILPKNVLKKFICISDLRAQIAGYLY 2032
Score = 435 (158.2 bits), Expect = 0., Sum P(5) = 0.
Identities = 76/86 (88%), Positives = 79/86 (91%)
Query: 220 RHTLAYDKGWRIRTEFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILE 279
RHTLAYDKGWR+RT+FKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILE
Sbjct: 1330 RHTLAYDKGWRVRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILE 1389
Query: 280 HTLFKGTYFPTWEGLFCAYGNWFPGS 305
HTLFKGTYFPTWEGLF + F S
Sbjct: 1390 HTLFKGTYFPTWEGLFWEKASGFEES 1415
Score = 341 (125.1 bits), Expect = 1.3e-177, Sum P(5) = 1.3e-177
Identities = 68/88 (77%), Positives = 75/88 (85%)
Query: 1032 SSDHTQDIRRQSDHQTFIFHSQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPR 1091
SS+ T+ ++ +F +QIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPR
Sbjct: 1658 SSEPTEPYLSSQNYGE-LFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPR 1716
Query: 1092 TGQLFLKIIHTSVWAGQKRLGQLGE-KT 1118
TGQLFLKIIHTSVWAGQKRLGQL + KT
Sbjct: 1717 TGQLFLKIIHTSVWAGQKRLGQLAKWKT 1744
Score = 336 (123.3 bits), Expect = 0., Sum P(5) = 0.
Identities = 61/84 (72%), Positives = 68/84 (80%)
Query: 139 YQDMNHTNSYGIIRGLQFASFIVQYYXXXXXXXXXXXQRASEMAGPPQMPNDFLTFQDTA 198
Y+DMNHTNSYGIIRGLQFASFIVQYY RASEMAGPPQMPNDFL+FQD A
Sbjct: 922 YKDMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDIA 981
Query: 199 TELAHPIRLYCRYVDKVHLFLRHT 222
TE AHPIRL+CRY+D++H+F R T
Sbjct: 982 TEAAHPIRLFCRYIDRIHIFFRFT 1005
Score = 291 (107.5 bits), Expect = 1.9e-184, Sum P(5) = 1.9e-184
Identities = 59/67 (88%), Positives = 61/67 (91%)
Query: 737 IVNKWNTALIGLMTYFRESVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPAVF-- 794
IVNKWNTALIGLMTYFRE+VVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPP VF
Sbjct: 1162 IVNKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYT 1221
Query: 795 DQELDAL 801
+EL L
Sbjct: 1222 PKELGGL 1228
Score = 272 (100.8 bits), Expect = 1.4e-199, Sum P(5) = 1.4e-199
Identities = 52/54 (96%), Positives = 54/54 (100%)
Query: 793 VFDQELDALEIETVQKETIHPRKSYKMNSSCADVLLFAAYKWNVSRPSLLADSK 846
VFDQELDALEIETVQKETIHPRKSYKMNSSCAD+LLFA+YKWNVSRPSLLADSK
Sbjct: 1499 VFDQELDALEIETVQKETIHPRKSYKMNSSCADILLFASYKWNVSRPSLLADSK 1552
Score = 212 (79.7 bits), Expect = 3.6e-146, Sum P(4) = 3.6e-146
Identities = 38/42 (90%), Positives = 42/42 (100%)
Query: 1233 VILKPDKSTITEPHHIWPSLSDDEWIKVEVQLKDLILADYGK 1274
VILKPDK+TITEPHHIWP+L+D+EWIKVEVQLKDLILADYGK
Sbjct: 1855 VILKPDKTTITEPHHIWPTLTDEEWIKVEVQLKDLILADYGK 1896
Score = 196 (74.1 bits), Expect = 1.4e-294, Sum P(5) = 1.4e-294
Identities = 32/40 (80%), Positives = 39/40 (97%)
Query: 696 GVRHDPNMKYDLQLANPKEFYHEIHRPAHFLNFSSLEDGD 735
GVRHDPNMKY+LQLANPKEFYHE+HRP+HFLNF+ L++G+
Sbjct: 2190 GVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQEGE 2229
Score = 157 (60.3 bits), Expect = 1.0e-208, Sum P(3) = 1.0e-208
Identities = 31/31 (100%), Positives = 31/31 (100%)
Query: 1 MVLFNLYDDWLKTISSYTAFSRLILILRALH 31
MVLFNLYDDWLKTISSYTAFSRLILILRALH
Sbjct: 1817 MVLFNLYDDWLKTISSYTAFSRLILILRALH 1847
Score = 149 (57.5 bits), Expect = 3.9e-146, Sum P(4) = 3.9e-146
Identities = 34/54 (62%), Positives = 37/54 (68%)
Query: 848 KFPPVVFYTPKELGGLGMLSMGHVLIPQVRELFKYNWGFIYTVSLD-FYDNMSH 900
+FPPVVFYTPKELGGLGMLSMGHVLIPQ +L W V + F MSH
Sbjct: 1213 RFPPVVFYTPKELGGLGMLSMGHVLIPQ-SDL---RWSKQTDVGITHFRSGMSH 1262
Score = 48 (22.0 bits), Expect = 4.8e-176, Sum P(5) = 4.8e-176
Identities = 16/45 (35%), Positives = 24/45 (53%)
Query: 410 W-AGQKRLGQLAFSRLILILRALHVNTERTKVILKPDKSTITEPH 453
W G K L Q A ++++ AL+V ER + L+ S TEP+
Sbjct: 1621 WFPGSKPLIQQAMAKIMKANPALYVLRERIRKGLQLYSSEPTEPY 1665
>UNIPROTKB|E1BZT5 [details] [associations]
symbol:PRPF8 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR000555 InterPro:IPR012591 InterPro:IPR012592
Pfam:PF01398 Pfam:PF08082 Pfam:PF08083 ProDom:PD149576
SMART:SM00232 GO:GO:0000398 GO:GO:0071013
GeneTree:ENSGT00390000015210 KO:K12856 OMA:EEFTHRD
InterPro:IPR012984 InterPro:IPR021983 InterPro:IPR019581
InterPro:IPR019580 InterPro:IPR019582 Pfam:PF08084 Pfam:PF12134
Pfam:PF10598 Pfam:PF10597 Pfam:PF10596 CTD:10594 EMBL:AADN02025906
IPI:IPI00583105 RefSeq:XP_415805.2 PRIDE:E1BZT5
Ensembl:ENSGALT00000004650 GeneID:417559 KEGG:gga:417559
NextBio:20820843 Uniprot:E1BZT5
Length = 2335
Score = 1329 (472.9 bits), Expect = 0., Sum P(5) = 0.
Identities = 253/277 (91%), Positives = 261/277 (94%)
Query: 420 AFSRLILILRALHVNTERTKVILKPDKSTITEPHHIWPSLSDDEWIKVEVQLKDLILADY 479
AFSRLILILRALHVN +R KVILKPDK+TITEPHHIWP+L+D+EWIKVEVQLKDLILADY
Sbjct: 1932 AFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWIKVEVQLKDLILADY 1991
Query: 480 GKKNNVNVASLTQSEIRDIILGMEISAPSAQRQQIAEIEKQTKEQSQLTATTTRTVNKHG 539
GKKNNVNVASLTQSEIRDIILGMEISAPS QRQQIAEIEKQTKEQSQLTAT TRTVNKHG
Sbjct: 1992 GKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQSQLTATQTRTVNKHG 2051
Query: 540 DEIITSTTSNYETATFGSKTEWRVRAISATNLHLRTNHIYVSSDDIKETGYTYILPKNVL 599
DEIITSTTSNYET TF SKTEWRVRAISA NLHLRTNHIYVSSDDIKETGYTYILPKNVL
Sbjct: 2052 DEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDIKETGYTYILPKNVL 2111
Query: 600 KKFVTISDLRAQIAGYLYGVSPADNPQVKEIRCIVMPPQWGTHQTVHLPASLPGHPYLKE 659
KKF+ ISDLRAQIAGYLYGVSP DNPQVKEIRCIVM PQWGTHQTVHLP LP H YLKE
Sbjct: 2112 KKFICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLPGQLPQHEYLKE 2171
Query: 660 MEPLGWIHTQPNELPQLSPQDVTSHAKIMADNASWDG 696
MEPLGWIHTQPNE PQLSPQDVT+HAK+MADN SWDG
Sbjct: 2172 MEPLGWIHTQPNESPQLSPQDVTTHAKVMADNPSWDG 2208
Score = 651 (234.2 bits), Expect = 0., Sum P(5) = 0.
Identities = 127/153 (83%), Positives = 136/153 (88%)
Query: 294 LFCAYGNWFPGSKPLIQQALAKIMKANPALYVLRERIRKALQLYSSEPTEPYLSSQNYGE 353
L AYGNWFPGSKPLIQQA+AKIMKANPALYVLRERIRK LQLYSSEPTEPYLSSQNYGE
Sbjct: 1711 LHSAYGNWFPGSKPLIQQAMAKIMKANPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGE 1770
Query: 354 LFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQ 413
LFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQ
Sbjct: 1771 LFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQ 1830
Query: 414 KRLGQLA----FSRLILILRALHVNTERTKVIL 442
KRLGQLA + ++R+L V + ++I+
Sbjct: 1831 KRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIV 1863
Score = 609 (219.4 bits), Expect = 0., Sum P(5) = 0.
Identities = 104/117 (88%), Positives = 115/117 (98%)
Query: 1115 GEKTVVITCSFTPGSCSLTAYKLTPSGFEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRF 1174
GEKT++ITCSFTPGSC+LTAYKLTPSG+EWGRQNTDKGNNPKGYLPSHYERVQMLLSDRF
Sbjct: 2208 GEKTIIITCSFTPGSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRF 2267
Query: 1175 LGFFMVPAQSSWNYNFMGVRHDPNMKYDLQLANPKEFYHEIHRPAHFLNFSSLEDGD 1231
LGFFMVPAQ SWNYNFMGVRHDPNMKY+LQLANPKEFYHE+HRP+HFLNF+ L++G+
Sbjct: 2268 LGFFMVPAQGSWNYNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQEGE 2324
Score = 575 (207.5 bits), Expect = 0., Sum P(4) = 0.
Identities = 105/109 (96%), Positives = 108/109 (99%)
Query: 32 SDLRWSKQTDVGITHFRSGMSHDEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAN 91
SDLRWSKQTDVGITHFRSGMSH+EDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEA
Sbjct: 1338 SDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAI 1397
Query: 92 AQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRIRTEFKQYQ 140
AQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWR+RT+FKQYQ
Sbjct: 1398 AQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRTDFKQYQ 1446
Score = 550 (198.7 bits), Expect = 1.1e-240, Sum P(5) = 1.1e-240
Identities = 109/116 (93%), Positives = 110/116 (94%)
Query: 905 MEISAPSAQRQQIAEIEKQTKEQSQLTATTTRTVNKHGDEIITSTTSNYETATFGSKTEW 964
MEISAPS QRQQIAEIEKQTKEQSQLTAT TRTVNKHGDEIITSTTSNYET TF SKTEW
Sbjct: 2014 MEISAPSQQRQQIAEIEKQTKEQSQLTATQTRTVNKHGDEIITSTTSNYETQTFSSKTEW 2073
Query: 965 RVRAISATNLHLRTNHIYVSSDDIKETGYTYILPKNVLKKFVTISDLRAQIAGYLY 1020
RVRAISA NLHLRTNHIYVSSDDIKETGYTYILPKNVLKKF+ ISDLRAQIAGYLY
Sbjct: 2074 RVRAISAANLHLRTNHIYVSSDDIKETGYTYILPKNVLKKFICISDLRAQIAGYLY 2129
Score = 435 (158.2 bits), Expect = 0., Sum P(5) = 0.
Identities = 76/86 (88%), Positives = 79/86 (91%)
Query: 220 RHTLAYDKGWRIRTEFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILE 279
RHTLAYDKGWR+RT+FKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILE
Sbjct: 1427 RHTLAYDKGWRVRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILE 1486
Query: 280 HTLFKGTYFPTWEGLFCAYGNWFPGS 305
HTLFKGTYFPTWEGLF + F S
Sbjct: 1487 HTLFKGTYFPTWEGLFWEKASGFEES 1512
Score = 341 (125.1 bits), Expect = 1.8e-178, Sum P(5) = 1.8e-178
Identities = 68/88 (77%), Positives = 75/88 (85%)
Query: 1032 SSDHTQDIRRQSDHQTFIFHSQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPR 1091
SS+ T+ ++ +F +QIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPR
Sbjct: 1755 SSEPTEPYLSSQNYGE-LFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPR 1813
Query: 1092 TGQLFLKIIHTSVWAGQKRLGQLGE-KT 1118
TGQLFLKIIHTSVWAGQKRLGQL + KT
Sbjct: 1814 TGQLFLKIIHTSVWAGQKRLGQLAKWKT 1841
Score = 338 (124.0 bits), Expect = 0., Sum P(5) = 0.
Identities = 61/84 (72%), Positives = 69/84 (82%)
Query: 139 YQDMNHTNSYGIIRGLQFASFIVQYYXXXXXXXXXXXQRASEMAGPPQMPNDFLTFQDTA 198
Y+DMNHTNSYGIIRGLQFASFIVQYY RASEMAGPPQMPNDFL+FQD A
Sbjct: 1019 YKDMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDIA 1078
Query: 199 TELAHPIRLYCRYVDKVHLFLRHT 222
TE+AHPIRL+CRY+D++H+F R T
Sbjct: 1079 TEVAHPIRLFCRYIDRIHIFFRFT 1102
Score = 291 (107.5 bits), Expect = 2.6e-185, Sum P(5) = 2.6e-185
Identities = 59/67 (88%), Positives = 61/67 (91%)
Query: 737 IVNKWNTALIGLMTYFRESVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPAVF-- 794
IVNKWNTALIGLMTYFRE+VVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPP VF
Sbjct: 1259 IVNKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYT 1318
Query: 795 DQELDAL 801
+EL L
Sbjct: 1319 PKELGGL 1325
Score = 272 (100.8 bits), Expect = 1.9e-200, Sum P(5) = 1.9e-200
Identities = 52/54 (96%), Positives = 54/54 (100%)
Query: 793 VFDQELDALEIETVQKETIHPRKSYKMNSSCADVLLFAAYKWNVSRPSLLADSK 846
VFDQELDALEIETVQKETIHPRKSYKMNSSCAD+LLFA+YKWNVSRPSLLADSK
Sbjct: 1596 VFDQELDALEIETVQKETIHPRKSYKMNSSCADILLFASYKWNVSRPSLLADSK 1649
Score = 212 (79.7 bits), Expect = 2.9e-146, Sum P(4) = 2.9e-146
Identities = 38/42 (90%), Positives = 42/42 (100%)
Query: 1233 VILKPDKSTITEPHHIWPSLSDDEWIKVEVQLKDLILADYGK 1274
VILKPDK+TITEPHHIWP+L+D+EWIKVEVQLKDLILADYGK
Sbjct: 1952 VILKPDKTTITEPHHIWPTLTDEEWIKVEVQLKDLILADYGK 1993
Score = 199 (75.1 bits), Expect = 1.4e-294, Sum P(5) = 1.4e-294
Identities = 33/45 (73%), Positives = 42/45 (93%)
Query: 691 NASWDGVRHDPNMKYDLQLANPKEFYHEIHRPAHFLNFSSLEDGD 735
N ++ GVRHDPNMKY+LQLANPKEFYHE+HRP+HFLNF+ L++G+
Sbjct: 2280 NYNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQEGE 2324
Score = 157 (60.3 bits), Expect = 4.2e-209, Sum P(3) = 4.2e-209
Identities = 31/31 (100%), Positives = 31/31 (100%)
Query: 1 MVLFNLYDDWLKTISSYTAFSRLILILRALH 31
MVLFNLYDDWLKTISSYTAFSRLILILRALH
Sbjct: 1914 MVLFNLYDDWLKTISSYTAFSRLILILRALH 1944
Score = 149 (57.5 bits), Expect = 5.2e-147, Sum P(4) = 5.2e-147
Identities = 34/54 (62%), Positives = 37/54 (68%)
Query: 848 KFPPVVFYTPKELGGLGMLSMGHVLIPQVRELFKYNWGFIYTVSLD-FYDNMSH 900
+FPPVVFYTPKELGGLGMLSMGHVLIPQ +L W V + F MSH
Sbjct: 1310 RFPPVVFYTPKELGGLGMLSMGHVLIPQ-SDL---RWSKQTDVGITHFRSGMSH 1359
Score = 48 (22.0 bits), Expect = 6.7e-177, Sum P(5) = 6.7e-177
Identities = 16/45 (35%), Positives = 24/45 (53%)
Query: 410 W-AGQKRLGQLAFSRLILILRALHVNTERTKVILKPDKSTITEPH 453
W G K L Q A ++++ AL+V ER + L+ S TEP+
Sbjct: 1718 WFPGSKPLIQQAMAKIMKANPALYVLRERIRKGLQLYSSEPTEPY 1762
>ZFIN|ZDB-GENE-030131-577 [details] [associations]
symbol:prpf8 "pre-mRNA processing factor 8"
species:7955 "Danio rerio" [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR000555 InterPro:IPR012591 InterPro:IPR012592
Pfam:PF01398 Pfam:PF08082 Pfam:PF08083 ProDom:PD149576
SMART:SM00232 ZFIN:ZDB-GENE-030131-577 GO:GO:0005681 GO:GO:0000398
GeneTree:ENSGT00390000015210 InterPro:IPR012984 InterPro:IPR021983
InterPro:IPR019581 InterPro:IPR019580 InterPro:IPR019582
Pfam:PF08084 Pfam:PF12134 Pfam:PF10598 Pfam:PF10597 Pfam:PF10596
EMBL:CR522882 IPI:IPI00932332 PRIDE:F1R7P3
Ensembl:ENSDART00000134601 ArrayExpress:F1R7P3 Bgee:F1R7P3
Uniprot:F1R7P3
Length = 2342
Score = 1323 (470.8 bits), Expect = 0., Sum P(5) = 0.
Identities = 252/277 (90%), Positives = 260/277 (93%)
Query: 420 AFSRLILILRALHVNTERTKVILKPDKSTITEPHHIWPSLSDDEWIKVEVQLKDLILADY 479
AFSRLILILRALHVN +R KVILKPDK+TITEPHHIWP+L+D+EWIKVEVQLKDLILADY
Sbjct: 1939 AFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWIKVEVQLKDLILADY 1998
Query: 480 GKKNNVNVASLTQSEIRDIILGMEISAPSAQRQQIAEIEKQTKEQSQLTATTTRTVNKHG 539
GKKNNVNVASLTQSEIRDIILGMEISAPS QRQQIAEIEKQTKEQSQLTAT TRTVNKHG
Sbjct: 1999 GKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQSQLTATQTRTVNKHG 2058
Query: 540 DEIITSTTSNYETATFGSKTEWRVRAISATNLHLRTNHIYVSSDDIKETGYTYILPKNVL 599
DEIITSTTSNYET TF SKTEWRVRAISA NLHLRTNHIYVSSDDIKETGYTYILPKNVL
Sbjct: 2059 DEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDIKETGYTYILPKNVL 2118
Query: 600 KKFVTISDLRAQIAGYLYGVSPADNPQVKEIRCIVMPPQWGTHQTVHLPASLPGHPYLKE 659
KKF+ ISDLRAQIAGYLYG SP DNPQVKEIRCIVM PQWGTHQTVHLP LP H YLKE
Sbjct: 2119 KKFICISDLRAQIAGYLYGTSPPDNPQVKEIRCIVMVPQWGTHQTVHLPNQLPQHEYLKE 2178
Query: 660 MEPLGWIHTQPNELPQLSPQDVTSHAKIMADNASWDG 696
MEPLGWIHTQPNE PQLSPQDVT+HAK+MADN SWDG
Sbjct: 2179 MEPLGWIHTQPNESPQLSPQDVTTHAKVMADNPSWDG 2215
Score = 637 (229.3 bits), Expect = 0., Sum P(5) = 0.
Identities = 124/153 (81%), Positives = 134/153 (87%)
Query: 294 LFCAYGNWFPGSKPLIQQALAKIMKANPALYVLRERIRKALQLYSSEPTEPYLSSQNYGE 353
L AYGNWFPG+KPLIQQA+AKIMKANPALYVLRERIRK LQLYSSEPTEPYLSSQNYGE
Sbjct: 1718 LHSAYGNWFPGAKPLIQQAMAKIMKANPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGE 1777
Query: 354 LFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQ 413
LFSNQIIWFVDDTNVYRVTIHK EGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQ
Sbjct: 1778 LFSNQIIWFVDDTNVYRVTIHKAIEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQ 1837
Query: 414 KRLGQLA----FSRLILILRALHVNTERTKVIL 442
KRLGQLA + ++R+L V + ++I+
Sbjct: 1838 KRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIV 1870
Score = 613 (220.8 bits), Expect = 0., Sum P(5) = 0.
Identities = 105/117 (89%), Positives = 115/117 (98%)
Query: 1115 GEKTVVITCSFTPGSCSLTAYKLTPSGFEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRF 1174
GEKT++ITCSFTPGSC+LTAYKLTPSG+EWGRQNTDKGNNPKGYLPSHYERVQMLLSDRF
Sbjct: 2215 GEKTIIITCSFTPGSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRF 2274
Query: 1175 LGFFMVPAQSSWNYNFMGVRHDPNMKYDLQLANPKEFYHEIHRPAHFLNFSSLEDGD 1231
LGFFMVP Q SWNYNFMGVRHDPNMKYDLQLANPKEFYHE+HRP+HFLNF+SL++G+
Sbjct: 2275 LGFFMVPGQVSWNYNFMGVRHDPNMKYDLQLANPKEFYHEVHRPSHFLNFASLQEGE 2331
Score = 575 (207.5 bits), Expect = 0., Sum P(4) = 0.
Identities = 105/109 (96%), Positives = 108/109 (99%)
Query: 32 SDLRWSKQTDVGITHFRSGMSHDEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAN 91
SDLRWSKQTDVGITHFRSGMSH+EDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEA
Sbjct: 1345 SDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAI 1404
Query: 92 AQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRIRTEFKQYQ 140
AQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWR+RT+FKQYQ
Sbjct: 1405 AQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRTDFKQYQ 1453
Score = 550 (198.7 bits), Expect = 8.3e-240, Sum P(5) = 8.3e-240
Identities = 109/116 (93%), Positives = 110/116 (94%)
Query: 905 MEISAPSAQRQQIAEIEKQTKEQSQLTATTTRTVNKHGDEIITSTTSNYETATFGSKTEW 964
MEISAPS QRQQIAEIEKQTKEQSQLTAT TRTVNKHGDEIITSTTSNYET TF SKTEW
Sbjct: 2021 MEISAPSQQRQQIAEIEKQTKEQSQLTATQTRTVNKHGDEIITSTTSNYETQTFSSKTEW 2080
Query: 965 RVRAISATNLHLRTNHIYVSSDDIKETGYTYILPKNVLKKFVTISDLRAQIAGYLY 1020
RVRAISA NLHLRTNHIYVSSDDIKETGYTYILPKNVLKKF+ ISDLRAQIAGYLY
Sbjct: 2081 RVRAISAANLHLRTNHIYVSSDDIKETGYTYILPKNVLKKFICISDLRAQIAGYLY 2136
Score = 435 (158.2 bits), Expect = 0., Sum P(5) = 0.
Identities = 76/86 (88%), Positives = 79/86 (91%)
Query: 220 RHTLAYDKGWRIRTEFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILE 279
RHTLAYDKGWR+RT+FKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILE
Sbjct: 1434 RHTLAYDKGWRVRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILE 1493
Query: 280 HTLFKGTYFPTWEGLFCAYGNWFPGS 305
HTLFKGTYFPTWEGLF + F S
Sbjct: 1494 HTLFKGTYFPTWEGLFWEKASGFEES 1519
Score = 341 (125.1 bits), Expect = 0., Sum P(5) = 0.
Identities = 62/82 (75%), Positives = 68/82 (82%)
Query: 139 YQDMNHTNSYGIIRGLQFASFIVQYYXXXXXXXXXXXQRASEMAGPPQMPNDFLTFQDTA 198
Y+DMNHTNSYGIIRGLQFASFIVQYY RASEMAGPPQMPNDFL+FQDTA
Sbjct: 1026 YKDMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDTA 1085
Query: 199 TELAHPIRLYCRYVDKVHLFLR 220
TE AHPIRLYCRY+D++H+F R
Sbjct: 1086 TESAHPIRLYCRYIDRIHIFFR 1107
Score = 330 (121.2 bits), Expect = 4.4e-178, Sum P(5) = 4.4e-178
Identities = 66/88 (75%), Positives = 73/88 (82%)
Query: 1032 SSDHTQDIRRQSDHQTFIFHSQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPR 1091
SS+ T+ ++ +F +QIIWFVDDTNVYRVTIHK EGNLTTKPINGAIFIFNPR
Sbjct: 1762 SSEPTEPYLSSQNYGE-LFSNQIIWFVDDTNVYRVTIHKAIEGNLTTKPINGAIFIFNPR 1820
Query: 1092 TGQLFLKIIHTSVWAGQKRLGQLGE-KT 1118
TGQLFLKIIHTSVWAGQKRLGQL + KT
Sbjct: 1821 TGQLFLKIIHTSVWAGQKRLGQLAKWKT 1848
Score = 291 (107.5 bits), Expect = 4.6e-186, Sum P(5) = 4.6e-186
Identities = 59/67 (88%), Positives = 61/67 (91%)
Query: 737 IVNKWNTALIGLMTYFRESVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPAVF-- 794
IVNKWNTALIGLMTYFRE+VVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPP VF
Sbjct: 1266 IVNKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYT 1325
Query: 795 DQELDAL 801
+EL L
Sbjct: 1326 PKELGGL 1332
Score = 272 (100.8 bits), Expect = 3.4e-201, Sum P(5) = 3.4e-201
Identities = 52/54 (96%), Positives = 54/54 (100%)
Query: 793 VFDQELDALEIETVQKETIHPRKSYKMNSSCADVLLFAAYKWNVSRPSLLADSK 846
VFDQELDALEIETVQKETIHPRKSYKMNSSCAD+LLFA+YKWNVSRPSLLADSK
Sbjct: 1603 VFDQELDALEIETVQKETIHPRKSYKMNSSCADILLFASYKWNVSRPSLLADSK 1656
Score = 212 (79.7 bits), Expect = 5.4e-145, Sum P(4) = 5.4e-145
Identities = 38/42 (90%), Positives = 42/42 (100%)
Query: 1233 VILKPDKSTITEPHHIWPSLSDDEWIKVEVQLKDLILADYGK 1274
VILKPDK+TITEPHHIWP+L+D+EWIKVEVQLKDLILADYGK
Sbjct: 1959 VILKPDKTTITEPHHIWPTLTDEEWIKVEVQLKDLILADYGK 2000
Score = 209 (78.6 bits), Expect = 8.8e-294, Sum P(5) = 8.8e-294
Identities = 35/45 (77%), Positives = 43/45 (95%)
Query: 691 NASWDGVRHDPNMKYDLQLANPKEFYHEIHRPAHFLNFSSLEDGD 735
N ++ GVRHDPNMKYDLQLANPKEFYHE+HRP+HFLNF+SL++G+
Sbjct: 2287 NYNFMGVRHDPNMKYDLQLANPKEFYHEVHRPSHFLNFASLQEGE 2331
Score = 157 (60.3 bits), Expect = 7.5e-209, Sum P(3) = 7.5e-209
Identities = 31/31 (100%), Positives = 31/31 (100%)
Query: 1 MVLFNLYDDWLKTISSYTAFSRLILILRALH 31
MVLFNLYDDWLKTISSYTAFSRLILILRALH
Sbjct: 1921 MVLFNLYDDWLKTISSYTAFSRLILILRALH 1951
Score = 149 (57.5 bits), Expect = 9.1e-148, Sum P(4) = 9.1e-148
Identities = 34/54 (62%), Positives = 37/54 (68%)
Query: 848 KFPPVVFYTPKELGGLGMLSMGHVLIPQVRELFKYNWGFIYTVSLD-FYDNMSH 900
+FPPVVFYTPKELGGLGMLSMGHVLIPQ +L W V + F MSH
Sbjct: 1317 RFPPVVFYTPKELGGLGMLSMGHVLIPQ-SDL---RWSKQTDVGITHFRSGMSH 1366
Score = 47 (21.6 bits), Expect = 1.5e-177, Sum P(5) = 1.5e-177
Identities = 16/45 (35%), Positives = 24/45 (53%)
Query: 410 W-AGQKRLGQLAFSRLILILRALHVNTERTKVILKPDKSTITEPH 453
W G K L Q A ++++ AL+V ER + L+ S TEP+
Sbjct: 1725 WFPGAKPLIQQAMAKIMKANPALYVLRERIRKGLQLYSSEPTEPY 1769
>WB|WBGene00004187 [details] [associations]
symbol:prp-8 species:6239 "Caenorhabditis elegans"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0018996
"molting cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] InterPro:IPR000555 InterPro:IPR012591
InterPro:IPR012592 Pfam:PF01398 Pfam:PF08082 Pfam:PF08083
ProDom:PD149576 SMART:SM00232 GO:GO:0009792 GO:GO:0006898
GO:GO:0040007 GO:GO:0016477 GO:GO:0008406 GO:GO:0002119
GO:GO:0018996 GO:GO:0005681 GO:GO:0003723 GO:GO:0040035
GO:GO:0000398 EMBL:FO080718 PIR:S44625 RefSeq:NP_498785.1 PDB:2P87
PDB:2P8R PDBsum:2P87 PDBsum:2P8R ProteinModelPortal:P34369
SMR:P34369 DIP:DIP-27427N MINT:MINT-1103137 STRING:P34369
PaxDb:P34369 PRIDE:P34369 EnsemblMetazoa:C50C3.6 GeneID:176153
KEGG:cel:CELE_C50C3.6 UCSC:C50C3.6 CTD:176153 WormBase:C50C3.6
eggNOG:COG5178 GeneTree:ENSGT00390000015210 HOGENOM:HOG000184103
InParanoid:P34369 KO:K12856 OMA:EEFTHRD EvolutionaryTrace:P34369
NextBio:891352 InterPro:IPR012984 InterPro:IPR021983
InterPro:IPR019581 InterPro:IPR019580 InterPro:IPR019582
Pfam:PF08084 Pfam:PF12134 Pfam:PF10598 Pfam:PF10597 Pfam:PF10596
Uniprot:P34369
Length = 2329
Score = 1232 (438.7 bits), Expect = 1.0e-309, Sum P(6) = 1.0e-309
Identities = 223/277 (80%), Positives = 258/277 (93%)
Query: 420 AFSRLILILRALHVNTERTKVILKPDKSTITEPHHIWPSLSDDEWIKVEVQLKDLILADY 479
AFSR++LI+R +H+N ++TKVILKPDK+TITEPHHIWP+LSDD+WIKVE+ LKD+ILADY
Sbjct: 1925 AFSRVVLIMRGMHINPDKTKVILKPDKTTITEPHHIWPTLSDDDWIKVELALKDMILADY 1984
Query: 480 GKKNNVNVASLTQSEIRDIILGMEISAPSAQRQQIAEIEKQTKEQSQLTATTTRTVNKHG 539
GKKNNVNVASLTQSE+RDIILGMEISAPS QRQQIA+IEKQTKEQSQ+TATTTRTVNKHG
Sbjct: 1985 GKKNNVNVASLTQSEVRDIILGMEISAPSQQRQQIADIEKQTKEQSQVTATTTRTVNKHG 2044
Query: 540 DEIITSTTSNYETATFGSKTEWRVRAISATNLHLRTNHIYVSSDDIKETGYTYILPKNVL 599
DEIIT+TTSNYETA+F S+TEWRVRAIS+TNLHLRT HIYV+SDD+K+TGYTYILPKN+L
Sbjct: 2045 DEIITATTSNYETASFASRTEWRVRAISSTNLHLRTQHIYVNSDDVKDTGYTYILPKNIL 2104
Query: 600 KKFVTISDLRAQIAGYLYGVSPADNPQVKEIRCIVMPPQWGTHQTVHLPASLPGHPYLKE 659
KKF+TISDLR QIAG++YGVSP DNPQVKEIRCIV+ PQ G+HQ V+LP LP H L++
Sbjct: 2105 KKFITISDLRTQIAGFMYGVSPPDNPQVKEIRCIVLVPQTGSHQQVNLPTQLPDHELLRD 2164
Query: 660 MEPLGWIHTQPNELPQLSPQDVTSHAKIMADNASWDG 696
EPLGW+HTQPNELPQLSPQDVT+HAK++ DN SWDG
Sbjct: 2165 FEPLGWMHTQPNELPQLSPQDVTTHAKLLTDNISWDG 2201
Score = 629 (226.5 bits), Expect = 1.0e-309, Sum P(6) = 1.0e-309
Identities = 121/153 (79%), Positives = 134/153 (87%)
Query: 294 LFCAYGNWFPGSKPLIQQALAKIMKANPALYVLRERIRKALQLYSSEPTEPYLSSQNYGE 353
L+ AYGNWFPG KPLI+QA+AKI+KANPA YVLRERIRK LQLYSSEPTEPYL+SQNYGE
Sbjct: 1704 LYSAYGNWFPGMKPLIRQAMAKIIKANPAFYVLRERIRKGLQLYSSEPTEPYLTSQNYGE 1763
Query: 354 LFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQ 413
LFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQ
Sbjct: 1764 LFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQ 1823
Query: 414 KRLGQLA----FSRLILILRALHVNTERTKVIL 442
KRL QLA + ++R+L V + ++I+
Sbjct: 1824 KRLSQLAKWKTAEEVAALIRSLPVEEQPRQIIV 1856
Score = 544 (196.6 bits), Expect = 4.4e-291, Sum P(4) = 4.4e-291
Identities = 98/110 (89%), Positives = 105/110 (95%)
Query: 32 SDLRWSKQTDVG-ITHFRSGMSHDEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEA 90
SDLRW +QT+ G +THFRSGMSHDEDQLIPNLYRYIQPWE+EF+DS RVWAEYALKRQEA
Sbjct: 1330 SDLRWMQQTEAGGVTHFRSGMSHDEDQLIPNLYRYIQPWEAEFVDSVRVWAEYALKRQEA 1389
Query: 91 NAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRIRTEFKQYQ 140
NAQNRRLTLEDL+DSWDRGIPRINTLFQKDRHTLAYDKGWR+RTEFK YQ
Sbjct: 1390 NAQNRRLTLEDLDDSWDRGIPRINTLFQKDRHTLAYDKGWRVRTEFKAYQ 1439
Score = 529 (191.3 bits), Expect = 4.2e-218, Sum P(6) = 4.2e-218
Identities = 99/116 (85%), Positives = 112/116 (96%)
Query: 905 MEISAPSAQRQQIAEIEKQTKEQSQLTATTTRTVNKHGDEIITSTTSNYETATFGSKTEW 964
MEISAPS QRQQIA+IEKQTKEQSQ+TATTTRTVNKHGDEIIT+TTSNYETA+F S+TEW
Sbjct: 2007 MEISAPSQQRQQIADIEKQTKEQSQVTATTTRTVNKHGDEIITATTSNYETASFASRTEW 2066
Query: 965 RVRAISATNLHLRTNHIYVSSDDIKETGYTYILPKNVLKKFVTISDLRAQIAGYLY 1020
RVRAIS+TNLHLRT HIYV+SDD+K+TGYTYILPKN+LKKF+TISDLR QIAG++Y
Sbjct: 2067 RVRAISSTNLHLRTQHIYVNSDDVKDTGYTYILPKNILKKFITISDLRTQIAGFMY 2122
Score = 495 (179.3 bits), Expect = 1.0e-309, Sum P(6) = 1.0e-309
Identities = 85/115 (73%), Positives = 99/115 (86%)
Query: 1115 GEKTVVITCSFTPGSCSLTAYKLTPSGFEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRF 1174
GEKTV+ITCSFTPGS SLTAYKLTPSG+EWG+ NTDKGNNPKGY+P+HYE+VQMLLSDRF
Sbjct: 2201 GEKTVMITCSFTPGSVSLTAYKLTPSGYEWGKANTDKGNNPKGYMPTHYEKVQMLLSDRF 2260
Query: 1175 LGFFMVPAQSSWNYNFMGVRHDPNMKYDLQLANPKEFYHEIHRPAHFLNFSSLED 1229
LG+FMVP+ WNYNF G R P MK+D+ L+NPKE+YHE HRP HF NF + +D
Sbjct: 2261 LGYFMVPSNGVWNYNFQGQRWSPAMKFDVCLSNPKEYYHEDHRPVHFHNFKAFDD 2315
Score = 428 (155.7 bits), Expect = 1.0e-309, Sum P(6) = 1.0e-309
Identities = 74/86 (86%), Positives = 78/86 (90%)
Query: 220 RHTLAYDKGWRIRTEFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILE 279
RHTLAYDKGWR+RTEFK YQ+LKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILE
Sbjct: 1420 RHTLAYDKGWRVRTEFKAYQILKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILE 1479
Query: 280 HTLFKGTYFPTWEGLFCAYGNWFPGS 305
HTLF+GTYFPTWEGLF + F S
Sbjct: 1480 HTLFRGTYFPTWEGLFWERASGFEES 1505
Score = 336 (123.3 bits), Expect = 1.4e-158, Sum P(6) = 1.4e-158
Identities = 70/109 (64%), Positives = 82/109 (75%)
Query: 1011 LRAQIAGYLYDHLVCGRHERVSSDHTQDIRRQSDHQTFIFHSQIIWFVDDTNVYRVTIHK 1070
++A A Y+ + + SS+ T+ ++ +F +QIIWFVDDTNVYRVTIHK
Sbjct: 1727 IKANPAFYVLRERIRKGLQLYSSEPTEPYLTSQNYGE-LFSNQIIWFVDDTNVYRVTIHK 1785
Query: 1071 TFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLGE-KT 1118
TFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRL QL + KT
Sbjct: 1786 TFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLSQLAKWKT 1834
Score = 298 (110.0 bits), Expect = 1.0e-309, Sum P(6) = 1.0e-309
Identities = 54/82 (65%), Positives = 64/82 (78%)
Query: 139 YQDMNHTNSYGIIRGLQFASFIVQYYXXXXXXXXXXXQRASEMAGPPQMPNDFLTFQDTA 198
Y+DMNHTNS+GIIRGLQFASFIVQ+Y +RASE+AGPPQ PN+FL FQD A
Sbjct: 1011 YKDMNHTNSFGIIRGLQFASFIVQFYGLVLDLLVLGLRRASEIAGPPQCPNEFLQFQDVA 1070
Query: 199 TELAHPIRLYCRYVDKVHLFLR 220
TE+ HPIRLYCRY+D+V + R
Sbjct: 1071 TEIGHPIRLYCRYIDRVWIMFR 1092
Score = 290 (107.1 bits), Expect = 4.3e-164, Sum P(7) = 4.3e-164
Identities = 56/58 (96%), Positives = 57/58 (98%)
Query: 737 IVNKWNTALIGLMTYFRESVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPAVF 794
IVNKWNTALIGLMTYFRE+VVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPP VF
Sbjct: 1251 IVNKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVF 1308
Score = 266 (98.7 bits), Expect = 4.5e-179, Sum P(6) = 4.5e-179
Identities = 51/54 (94%), Positives = 53/54 (98%)
Query: 793 VFDQELDALEIETVQKETIHPRKSYKMNSSCADVLLFAAYKWNVSRPSLLADSK 846
VFDQELDALEI+TVQKETIHPRKSYKMNSSCADVLLFA YKWNVSRPSL+ADSK
Sbjct: 1589 VFDQELDALEIQTVQKETIHPRKSYKMNSSCADVLLFAQYKWNVSRPSLMADSK 1642
Score = 206 (77.6 bits), Expect = 3.1e-137, Sum P(5) = 3.1e-137
Identities = 37/46 (80%), Positives = 42/46 (91%)
Query: 1229 DGDGVILKPDKSTITEPHHIWPSLSDDEWIKVEVQLKDLILADYGK 1274
D VILKPDK+TITEPHHIWP+LSDD+WIKVE+ LKD+ILADYGK
Sbjct: 1941 DKTKVILKPDKTTITEPHHIWPTLSDDDWIKVELALKDMILADYGK 1986
Score = 145 (56.1 bits), Expect = 2.7e-185, Sum P(3) = 2.7e-185
Identities = 26/31 (83%), Positives = 30/31 (96%)
Query: 1 MVLFNLYDDWLKTISSYTAFSRLILILRALH 31
MVLFNLYDDWLKTISSYTAFSR++LI+R +H
Sbjct: 1907 MVLFNLYDDWLKTISSYTAFSRVVLIMRGMH 1937
Score = 145 (56.1 bits), Expect = 5.7e-126, Sum P(6) = 5.7e-126
Identities = 26/28 (92%), Positives = 28/28 (100%)
Query: 848 KFPPVVFYTPKELGGLGMLSMGHVLIPQ 875
+FPPVVFYTPKE+GGLGMLSMGHVLIPQ
Sbjct: 1302 RFPPVVFYTPKEIGGLGMLSMGHVLIPQ 1329
Score = 138 (53.6 bits), Expect = 4.1e-130, Sum P(5) = 4.1e-130
Identities = 30/88 (34%), Positives = 48/88 (54%)
Query: 658 KEMEPLGWIHTQPNELPQLSPQDVTSHAKIMAD---NASWDGVRHDPNMKYDLQLANPKE 714
K P G++ T ++ L + + ++ N ++ G R P MK+D+ L+NPKE
Sbjct: 2237 KGNNPKGYMPTHYEKVQMLLSDRFLGYFMVPSNGVWNYNFQGQRWSPAMKFDVCLSNPKE 2296
Query: 715 FYHEIHRPAHFLNFSSLED--GDGIVNK 740
+YHE HRP HF NF + +D G G ++
Sbjct: 2297 YYHEDHRPVHFHNFKAFDDPLGTGSADR 2324
Score = 43 (20.2 bits), Expect = 9.8e-156, Sum P(6) = 9.8e-156
Identities = 15/45 (33%), Positives = 23/45 (51%)
Query: 410 W-AGQKRLGQLAFSRLILILRALHVNTERTKVILKPDKSTITEPH 453
W G K L + A +++I A +V ER + L+ S TEP+
Sbjct: 1711 WFPGMKPLIRQAMAKIIKANPAFYVLRERIRKGLQLYSSEPTEPY 1755
Score = 41 (19.5 bits), Expect = 5.9e-205, Sum P(5) = 5.9e-205
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 396 RTGQLFLKIIHTSVWAGQKRLGQLAFS 422
RT Q FLK+ S+ R+ Q+ S
Sbjct: 1216 RTAQCFLKVDEESLSKFHNRIRQILMS 1242
Score = 39 (18.8 bits), Expect = 1.0e-309, Sum P(6) = 1.0e-309
Identities = 8/38 (21%), Positives = 19/38 (50%)
Query: 26 ILRALHSDLRWSKQTDVGITHFRSGMSHDEDQLIPNLY 63
+++ LH+D W++ D+ R+ + + P +Y
Sbjct: 271 LVKDLHTDEDWNEFNDINKVIIRAPIRTEYRIAFPFMY 308
Score = 38 (18.4 bits), Expect = 4.6e-65, Sum P(4) = 4.6e-65
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 1091 RTGQLFLKIIHTSVWAGQKRLGQL 1114
RT Q FLK+ S+ R+ Q+
Sbjct: 1216 RTAQCFLKVDEESLSKFHNRIRQI 1239
>MGI|MGI:2179381 [details] [associations]
symbol:Prpf8 "pre-mRNA processing factor 8" species:10090
"Mus musculus" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISO] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] [GO:0005682 "U5 snRNP" evidence=ISO] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=ISO]
InterPro:IPR000555 InterPro:IPR012591 InterPro:IPR012592
Pfam:PF01398 Pfam:PF08082 Pfam:PF08083 ProDom:PD149576
SMART:SM00232 MGI:MGI:2179381 GO:GO:0016607 GO:GO:0003723
GO:GO:0000398 GO:GO:0071013 EMBL:AL591496 eggNOG:COG5178
GeneTree:ENSGT00390000015210 KO:K12856 OMA:EEFTHRD
InterPro:IPR012984 InterPro:IPR021983 InterPro:IPR019581
InterPro:IPR019580 InterPro:IPR019582 Pfam:PF08084 Pfam:PF12134
Pfam:PF10598 Pfam:PF10597 Pfam:PF10596 CTD:10594 HOVERGEN:HBG052796
OrthoDB:EOG45HRWF ChiTaRS:PRPF8 EMBL:AB047391 EMBL:BC034648
EMBL:BC054103 EMBL:BC093481 EMBL:AK041017 IPI:IPI00121596
RefSeq:NP_619600.2 UniGene:Mm.3757 ProteinModelPortal:Q99PV0
SMR:Q99PV0 IntAct:Q99PV0 STRING:Q99PV0 PhosphoSite:Q99PV0
PaxDb:Q99PV0 PRIDE:Q99PV0 DNASU:192159 Ensembl:ENSMUST00000018449
Ensembl:ENSMUST00000102510 GeneID:192159 KEGG:mmu:192159
UCSC:uc007kdx.1 InParanoid:A5D6Q4 NextBio:371143 Bgee:Q99PV0
CleanEx:MM_PRPF8 Genevestigator:Q99PV0
GermOnline:ENSMUSG00000020850 Uniprot:Q99PV0
Length = 2335
Score = 1330 (473.2 bits), Expect = 1.8e-294, Sum P(5) = 1.8e-294
Identities = 253/277 (91%), Positives = 262/277 (94%)
Query: 420 AFSRLILILRALHVNTERTKVILKPDKSTITEPHHIWPSLSDDEWIKVEVQLKDLILADY 479
AFSRLILILRALHVN +R KVILKPDK+T+TEPHHIWP+L+D+EWIKVEVQLKDLILADY
Sbjct: 1932 AFSRLILILRALHVNNDRAKVILKPDKTTVTEPHHIWPTLTDEEWIKVEVQLKDLILADY 1991
Query: 480 GKKNNVNVASLTQSEIRDIILGMEISAPSAQRQQIAEIEKQTKEQSQLTATTTRTVNKHG 539
GKKNNVNVASLTQSEIRDIILGMEISAPS QRQQIAEIEKQTKEQSQLTAT TRTVNKHG
Sbjct: 1992 GKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQSQLTATQTRTVNKHG 2051
Query: 540 DEIITSTTSNYETATFGSKTEWRVRAISATNLHLRTNHIYVSSDDIKETGYTYILPKNVL 599
DEIITSTTSNYET TF SKTEWRVRAISA NLHLRTNHIYVSSDDIKETGYTYILPKNVL
Sbjct: 2052 DEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDIKETGYTYILPKNVL 2111
Query: 600 KKFVTISDLRAQIAGYLYGVSPADNPQVKEIRCIVMPPQWGTHQTVHLPASLPGHPYLKE 659
KKF+ ISDLRAQIAGYLYGVSP DNPQVKEIRCIVM PQWGTHQTVHLP+ LP H YLKE
Sbjct: 2112 KKFICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLPSQLPQHEYLKE 2171
Query: 660 MEPLGWIHTQPNELPQLSPQDVTSHAKIMADNASWDG 696
MEPLGWIHTQPNE PQLSPQDVT+HAKIMADN SWDG
Sbjct: 2172 MEPLGWIHTQPNESPQLSPQDVTTHAKIMADNPSWDG 2208
Score = 1107 (394.7 bits), Expect = 1.5e-251, Sum P(4) = 1.5e-251
Identities = 226/327 (69%), Positives = 250/327 (76%)
Query: 905 MEISAPSAQRQQIAEIEKQTKEQSQLTATTTRTVNKHGDEIITSTTSNYETATFGSKTEW 964
MEISAPS QRQQIAEIEKQTKEQSQLTAT TRTVNKHGDEIITSTTSNYET TF SKTEW
Sbjct: 2014 MEISAPSQQRQQIAEIEKQTKEQSQLTATQTRTVNKHGDEIITSTTSNYETQTFSSKTEW 2073
Query: 965 RVRAISATNLHLRTNHIYVSSDDIKETGYTYILPKNVLKKFVTISDLRAQIAGYLYDHLV 1024
RVRAISA NLHLRTNHIYVSSDDIKETGYTYILPKNVLKKF+ ISDLRAQIAGYLY
Sbjct: 2074 RVRAISAANLHLRTNHIYVSSDDIKETGYTYILPKNVLKKFICISDLRAQIAGYLYGVSP 2133
Query: 1025 CGRHERVSSDHTQDIRRQSDHQTFIFHSQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGA 1084
+ + + HQT SQ+ + Y + G + T+P
Sbjct: 2134 PDNPQVKEIRCIVMVPQWGTHQTVHLPSQL-----PQHEYLKEMEPL--GWIHTQPNE-- 2184
Query: 1085 IFIFNPRTGQLFLKIIHTSVWAGQKRLGQLGEKTVVITCSFTPGSCSLTAYKLTPSGFEW 1144
+P+ + H + A GEKT++ITCSFTPGSC+LTAYKLTPSG+EW
Sbjct: 2185 ----SPQLSPQDVTT-HAKIMADNPSWD--GEKTIIITCSFTPGSCTLTAYKLTPSGYEW 2237
Query: 1145 GRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQSSWNYNFMGVRHDPNMKYDLQ 1204
GRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQSSWNYNFMGVRHDPNMKY+LQ
Sbjct: 2238 GRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQSSWNYNFMGVRHDPNMKYELQ 2297
Query: 1205 LANPKEFYHEIHRPAHFLNFSSLEDGD 1231
LANPKEFYHE+HRP+HFLNF+ L++G+
Sbjct: 2298 LANPKEFYHEVHRPSHFLNFALLQEGE 2324
Score = 651 (234.2 bits), Expect = 1.8e-294, Sum P(5) = 1.8e-294
Identities = 127/153 (83%), Positives = 136/153 (88%)
Query: 294 LFCAYGNWFPGSKPLIQQALAKIMKANPALYVLRERIRKALQLYSSEPTEPYLSSQNYGE 353
L AYGNWFPGSKPLIQQA+AKIMKANPALYVLRERIRK LQLYSSEPTEPYLSSQNYGE
Sbjct: 1711 LHSAYGNWFPGSKPLIQQAMAKIMKANPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGE 1770
Query: 354 LFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQ 413
LFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQ
Sbjct: 1771 LFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQ 1830
Query: 414 KRLGQLA----FSRLILILRALHVNTERTKVIL 442
KRLGQLA + ++R+L V + ++I+
Sbjct: 1831 KRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIV 1863
Score = 575 (207.5 bits), Expect = 3.7e-276, Sum P(4) = 3.7e-276
Identities = 105/109 (96%), Positives = 108/109 (99%)
Query: 32 SDLRWSKQTDVGITHFRSGMSHDEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAN 91
SDLRWSKQTDVGITHFRSGMSH+EDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEA
Sbjct: 1338 SDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAI 1397
Query: 92 AQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRIRTEFKQYQ 140
AQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWR+RT+FKQYQ
Sbjct: 1398 AQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRTDFKQYQ 1446
Score = 435 (158.2 bits), Expect = 1.8e-294, Sum P(5) = 1.8e-294
Identities = 76/86 (88%), Positives = 79/86 (91%)
Query: 220 RHTLAYDKGWRIRTEFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILE 279
RHTLAYDKGWR+RT+FKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILE
Sbjct: 1427 RHTLAYDKGWRVRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILE 1486
Query: 280 HTLFKGTYFPTWEGLFCAYGNWFPGS 305
HTLFKGTYFPTWEGLF + F S
Sbjct: 1487 HTLFKGTYFPTWEGLFWEKASGFEES 1512
Score = 341 (125.1 bits), Expect = 2.7e-135, Sum P(5) = 2.7e-135
Identities = 68/88 (77%), Positives = 75/88 (85%)
Query: 1032 SSDHTQDIRRQSDHQTFIFHSQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPR 1091
SS+ T+ ++ +F +QIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPR
Sbjct: 1755 SSEPTEPYLSSQNYGE-LFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPR 1813
Query: 1092 TGQLFLKIIHTSVWAGQKRLGQLGE-KT 1118
TGQLFLKIIHTSVWAGQKRLGQL + KT
Sbjct: 1814 TGQLFLKIIHTSVWAGQKRLGQLAKWKT 1841
Score = 336 (123.3 bits), Expect = 1.8e-294, Sum P(5) = 1.8e-294
Identities = 61/84 (72%), Positives = 68/84 (80%)
Query: 139 YQDMNHTNSYGIIRGLQFASFIVQYYXXXXXXXXXXXQRASEMAGPPQMPNDFLTFQDTA 198
Y+DMNHTNSYGIIRGLQFASFIVQYY RASEMAGPPQMPNDFL+FQD A
Sbjct: 1019 YKDMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDIA 1078
Query: 199 TELAHPIRLYCRYVDKVHLFLRHT 222
TE AHPIRL+CRY+D++H+F R T
Sbjct: 1079 TEAAHPIRLFCRYIDRIHIFFRFT 1102
Score = 291 (107.5 bits), Expect = 2.0e-196, Sum P(4) = 2.0e-196
Identities = 59/67 (88%), Positives = 61/67 (91%)
Query: 737 IVNKWNTALIGLMTYFRESVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPAVF-- 794
IVNKWNTALIGLMTYFRE+VVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPP VF
Sbjct: 1259 IVNKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYT 1318
Query: 795 DQELDAL 801
+EL L
Sbjct: 1319 PKELGGL 1325
Score = 272 (100.8 bits), Expect = 1.3e-211, Sum P(4) = 1.3e-211
Identities = 52/54 (96%), Positives = 54/54 (100%)
Query: 793 VFDQELDALEIETVQKETIHPRKSYKMNSSCADVLLFAAYKWNVSRPSLLADSK 846
VFDQELDALEIETVQKETIHPRKSYKMNSSCAD+LLFA+YKWNVSRPSLLADSK
Sbjct: 1596 VFDQELDALEIETVQKETIHPRKSYKMNSSCADILLFASYKWNVSRPSLLADSK 1649
Score = 211 (79.3 bits), Expect = 6.0e-146, Sum P(4) = 6.0e-146
Identities = 37/42 (88%), Positives = 42/42 (100%)
Query: 1233 VILKPDKSTITEPHHIWPSLSDDEWIKVEVQLKDLILADYGK 1274
VILKPDK+T+TEPHHIWP+L+D+EWIKVEVQLKDLILADYGK
Sbjct: 1952 VILKPDKTTVTEPHHIWPTLTDEEWIKVEVQLKDLILADYGK 1993
Score = 199 (75.1 bits), Expect = 1.8e-294, Sum P(5) = 1.8e-294
Identities = 33/45 (73%), Positives = 42/45 (93%)
Query: 691 NASWDGVRHDPNMKYDLQLANPKEFYHEIHRPAHFLNFSSLEDGD 735
N ++ GVRHDPNMKY+LQLANPKEFYHE+HRP+HFLNF+ L++G+
Sbjct: 2280 NYNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQEGE 2324
Score = 157 (60.3 bits), Expect = 5.9e-166, Sum P(3) = 5.9e-166
Identities = 31/31 (100%), Positives = 31/31 (100%)
Query: 1 MVLFNLYDDWLKTISSYTAFSRLILILRALH 31
MVLFNLYDDWLKTISSYTAFSRLILILRALH
Sbjct: 1914 MVLFNLYDDWLKTISSYTAFSRLILILRALH 1944
Score = 149 (57.5 bits), Expect = 1.9e-155, Sum P(3) = 1.9e-155
Identities = 34/54 (62%), Positives = 37/54 (68%)
Query: 848 KFPPVVFYTPKELGGLGMLSMGHVLIPQVRELFKYNWGFIYTVSLD-FYDNMSH 900
+FPPVVFYTPKELGGLGMLSMGHVLIPQ +L W V + F MSH
Sbjct: 1310 RFPPVVFYTPKELGGLGMLSMGHVLIPQ-SDL---RWSKQTDVGITHFRSGMSH 1359
Score = 48 (22.0 bits), Expect = 3.4e-80, Sum P(4) = 3.4e-80
Identities = 16/45 (35%), Positives = 24/45 (53%)
Query: 410 W-AGQKRLGQLAFSRLILILRALHVNTERTKVILKPDKSTITEPH 453
W G K L Q A ++++ AL+V ER + L+ S TEP+
Sbjct: 1718 WFPGSKPLIQQAMAKIMKANPALYVLRERIRKGLQLYSSEPTEPY 1762
Score = 39 (18.8 bits), Expect = 2.9e-79, Sum P(4) = 2.9e-79
Identities = 13/52 (25%), Positives = 24/52 (46%)
Query: 294 LFCAYGNWFPGSKPLIQQALAKIMKANPALYVLRERIRKALQLYSSEPTEPY 345
LF Y +W A ++++ AL+V +R + L+ + TEP+
Sbjct: 1916 LFNLYDDWLKTISSYT--AFSRLILILRALHVNNDRAKVILKPDKTTVTEPH 1965
>UNIPROTKB|G3V6H2 [details] [associations]
symbol:Prpf8 "Pre-mRNA processing factor 8, isoform CRA_a"
species:10116 "Rattus norvegicus" [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] InterPro:IPR000555 InterPro:IPR012591
InterPro:IPR012592 Pfam:PF01398 Pfam:PF08082 Pfam:PF08083
ProDom:PD149576 SMART:SM00232 RGD:1305467 GO:GO:0005681
EMBL:CH473948 GO:GO:0000398 GeneTree:ENSGT00390000015210 KO:K12856
OMA:EEFTHRD InterPro:IPR012984 InterPro:IPR021983
InterPro:IPR019581 InterPro:IPR019580 InterPro:IPR019582
Pfam:PF08084 Pfam:PF12134 Pfam:PF10598 Pfam:PF10597 Pfam:PF10596
CTD:10594 RefSeq:NP_001178519.1 UniGene:Rn.106432
ProteinModelPortal:G3V6H2 SMR:G3V6H2 PRIDE:G3V6H2
Ensembl:ENSRNOT00000005016 GeneID:287530 KEGG:rno:287530
NextBio:626419 Uniprot:G3V6H2
Length = 2335
Score = 1330 (473.2 bits), Expect = 1.8e-294, Sum P(5) = 1.8e-294
Identities = 253/277 (91%), Positives = 262/277 (94%)
Query: 420 AFSRLILILRALHVNTERTKVILKPDKSTITEPHHIWPSLSDDEWIKVEVQLKDLILADY 479
AFSRLILILRALHVN +R KVILKPDK+T+TEPHHIWP+L+D+EWIKVEVQLKDLILADY
Sbjct: 1932 AFSRLILILRALHVNNDRAKVILKPDKTTVTEPHHIWPTLTDEEWIKVEVQLKDLILADY 1991
Query: 480 GKKNNVNVASLTQSEIRDIILGMEISAPSAQRQQIAEIEKQTKEQSQLTATTTRTVNKHG 539
GKKNNVNVASLTQSEIRDIILGMEISAPS QRQQIAEIEKQTKEQSQLTAT TRTVNKHG
Sbjct: 1992 GKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQSQLTATQTRTVNKHG 2051
Query: 540 DEIITSTTSNYETATFGSKTEWRVRAISATNLHLRTNHIYVSSDDIKETGYTYILPKNVL 599
DEIITSTTSNYET TF SKTEWRVRAISA NLHLRTNHIYVSSDDIKETGYTYILPKNVL
Sbjct: 2052 DEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDIKETGYTYILPKNVL 2111
Query: 600 KKFVTISDLRAQIAGYLYGVSPADNPQVKEIRCIVMPPQWGTHQTVHLPASLPGHPYLKE 659
KKF+ ISDLRAQIAGYLYGVSP DNPQVKEIRCIVM PQWGTHQTVHLP+ LP H YLKE
Sbjct: 2112 KKFICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLPSQLPQHEYLKE 2171
Query: 660 MEPLGWIHTQPNELPQLSPQDVTSHAKIMADNASWDG 696
MEPLGWIHTQPNE PQLSPQDVT+HAKIMADN SWDG
Sbjct: 2172 MEPLGWIHTQPNESPQLSPQDVTTHAKIMADNPSWDG 2208
Score = 1107 (394.7 bits), Expect = 1.5e-251, Sum P(4) = 1.5e-251
Identities = 226/327 (69%), Positives = 250/327 (76%)
Query: 905 MEISAPSAQRQQIAEIEKQTKEQSQLTATTTRTVNKHGDEIITSTTSNYETATFGSKTEW 964
MEISAPS QRQQIAEIEKQTKEQSQLTAT TRTVNKHGDEIITSTTSNYET TF SKTEW
Sbjct: 2014 MEISAPSQQRQQIAEIEKQTKEQSQLTATQTRTVNKHGDEIITSTTSNYETQTFSSKTEW 2073
Query: 965 RVRAISATNLHLRTNHIYVSSDDIKETGYTYILPKNVLKKFVTISDLRAQIAGYLYDHLV 1024
RVRAISA NLHLRTNHIYVSSDDIKETGYTYILPKNVLKKF+ ISDLRAQIAGYLY
Sbjct: 2074 RVRAISAANLHLRTNHIYVSSDDIKETGYTYILPKNVLKKFICISDLRAQIAGYLYGVSP 2133
Query: 1025 CGRHERVSSDHTQDIRRQSDHQTFIFHSQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGA 1084
+ + + HQT SQ+ + Y + G + T+P
Sbjct: 2134 PDNPQVKEIRCIVMVPQWGTHQTVHLPSQL-----PQHEYLKEMEPL--GWIHTQPNE-- 2184
Query: 1085 IFIFNPRTGQLFLKIIHTSVWAGQKRLGQLGEKTVVITCSFTPGSCSLTAYKLTPSGFEW 1144
+P+ + H + A GEKT++ITCSFTPGSC+LTAYKLTPSG+EW
Sbjct: 2185 ----SPQLSPQDVTT-HAKIMADNPSWD--GEKTIIITCSFTPGSCTLTAYKLTPSGYEW 2237
Query: 1145 GRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQSSWNYNFMGVRHDPNMKYDLQ 1204
GRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQSSWNYNFMGVRHDPNMKY+LQ
Sbjct: 2238 GRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQSSWNYNFMGVRHDPNMKYELQ 2297
Query: 1205 LANPKEFYHEIHRPAHFLNFSSLEDGD 1231
LANPKEFYHE+HRP+HFLNF+ L++G+
Sbjct: 2298 LANPKEFYHEVHRPSHFLNFALLQEGE 2324
Score = 651 (234.2 bits), Expect = 1.8e-294, Sum P(5) = 1.8e-294
Identities = 127/153 (83%), Positives = 136/153 (88%)
Query: 294 LFCAYGNWFPGSKPLIQQALAKIMKANPALYVLRERIRKALQLYSSEPTEPYLSSQNYGE 353
L AYGNWFPGSKPLIQQA+AKIMKANPALYVLRERIRK LQLYSSEPTEPYLSSQNYGE
Sbjct: 1711 LHSAYGNWFPGSKPLIQQAMAKIMKANPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGE 1770
Query: 354 LFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQ 413
LFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQ
Sbjct: 1771 LFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQ 1830
Query: 414 KRLGQLA----FSRLILILRALHVNTERTKVIL 442
KRLGQLA + ++R+L V + ++I+
Sbjct: 1831 KRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIV 1863
Score = 575 (207.5 bits), Expect = 3.7e-276, Sum P(4) = 3.7e-276
Identities = 105/109 (96%), Positives = 108/109 (99%)
Query: 32 SDLRWSKQTDVGITHFRSGMSHDEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAN 91
SDLRWSKQTDVGITHFRSGMSH+EDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEA
Sbjct: 1338 SDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAI 1397
Query: 92 AQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRIRTEFKQYQ 140
AQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWR+RT+FKQYQ
Sbjct: 1398 AQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRTDFKQYQ 1446
Score = 435 (158.2 bits), Expect = 1.8e-294, Sum P(5) = 1.8e-294
Identities = 76/86 (88%), Positives = 79/86 (91%)
Query: 220 RHTLAYDKGWRIRTEFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILE 279
RHTLAYDKGWR+RT+FKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILE
Sbjct: 1427 RHTLAYDKGWRVRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILE 1486
Query: 280 HTLFKGTYFPTWEGLFCAYGNWFPGS 305
HTLFKGTYFPTWEGLF + F S
Sbjct: 1487 HTLFKGTYFPTWEGLFWEKASGFEES 1512
Score = 341 (125.1 bits), Expect = 2.7e-135, Sum P(5) = 2.7e-135
Identities = 68/88 (77%), Positives = 75/88 (85%)
Query: 1032 SSDHTQDIRRQSDHQTFIFHSQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPR 1091
SS+ T+ ++ +F +QIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPR
Sbjct: 1755 SSEPTEPYLSSQNYGE-LFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPR 1813
Query: 1092 TGQLFLKIIHTSVWAGQKRLGQLGE-KT 1118
TGQLFLKIIHTSVWAGQKRLGQL + KT
Sbjct: 1814 TGQLFLKIIHTSVWAGQKRLGQLAKWKT 1841
Score = 336 (123.3 bits), Expect = 1.8e-294, Sum P(5) = 1.8e-294
Identities = 61/84 (72%), Positives = 68/84 (80%)
Query: 139 YQDMNHTNSYGIIRGLQFASFIVQYYXXXXXXXXXXXQRASEMAGPPQMPNDFLTFQDTA 198
Y+DMNHTNSYGIIRGLQFASFIVQYY RASEMAGPPQMPNDFL+FQD A
Sbjct: 1019 YKDMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDIA 1078
Query: 199 TELAHPIRLYCRYVDKVHLFLRHT 222
TE AHPIRL+CRY+D++H+F R T
Sbjct: 1079 TEAAHPIRLFCRYIDRIHIFFRFT 1102
Score = 291 (107.5 bits), Expect = 2.0e-196, Sum P(4) = 2.0e-196
Identities = 59/67 (88%), Positives = 61/67 (91%)
Query: 737 IVNKWNTALIGLMTYFRESVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPAVF-- 794
IVNKWNTALIGLMTYFRE+VVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPP VF
Sbjct: 1259 IVNKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYT 1318
Query: 795 DQELDAL 801
+EL L
Sbjct: 1319 PKELGGL 1325
Score = 272 (100.8 bits), Expect = 1.3e-211, Sum P(4) = 1.3e-211
Identities = 52/54 (96%), Positives = 54/54 (100%)
Query: 793 VFDQELDALEIETVQKETIHPRKSYKMNSSCADVLLFAAYKWNVSRPSLLADSK 846
VFDQELDALEIETVQKETIHPRKSYKMNSSCAD+LLFA+YKWNVSRPSLLADSK
Sbjct: 1596 VFDQELDALEIETVQKETIHPRKSYKMNSSCADILLFASYKWNVSRPSLLADSK 1649
Score = 211 (79.3 bits), Expect = 6.0e-146, Sum P(4) = 6.0e-146
Identities = 37/42 (88%), Positives = 42/42 (100%)
Query: 1233 VILKPDKSTITEPHHIWPSLSDDEWIKVEVQLKDLILADYGK 1274
VILKPDK+T+TEPHHIWP+L+D+EWIKVEVQLKDLILADYGK
Sbjct: 1952 VILKPDKTTVTEPHHIWPTLTDEEWIKVEVQLKDLILADYGK 1993
Score = 199 (75.1 bits), Expect = 1.8e-294, Sum P(5) = 1.8e-294
Identities = 33/45 (73%), Positives = 42/45 (93%)
Query: 691 NASWDGVRHDPNMKYDLQLANPKEFYHEIHRPAHFLNFSSLEDGD 735
N ++ GVRHDPNMKY+LQLANPKEFYHE+HRP+HFLNF+ L++G+
Sbjct: 2280 NYNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQEGE 2324
Score = 157 (60.3 bits), Expect = 5.9e-166, Sum P(3) = 5.9e-166
Identities = 31/31 (100%), Positives = 31/31 (100%)
Query: 1 MVLFNLYDDWLKTISSYTAFSRLILILRALH 31
MVLFNLYDDWLKTISSYTAFSRLILILRALH
Sbjct: 1914 MVLFNLYDDWLKTISSYTAFSRLILILRALH 1944
Score = 149 (57.5 bits), Expect = 1.9e-155, Sum P(3) = 1.9e-155
Identities = 34/54 (62%), Positives = 37/54 (68%)
Query: 848 KFPPVVFYTPKELGGLGMLSMGHVLIPQVRELFKYNWGFIYTVSLD-FYDNMSH 900
+FPPVVFYTPKELGGLGMLSMGHVLIPQ +L W V + F MSH
Sbjct: 1310 RFPPVVFYTPKELGGLGMLSMGHVLIPQ-SDL---RWSKQTDVGITHFRSGMSH 1359
Score = 48 (22.0 bits), Expect = 3.4e-80, Sum P(4) = 3.4e-80
Identities = 16/45 (35%), Positives = 24/45 (53%)
Query: 410 W-AGQKRLGQLAFSRLILILRALHVNTERTKVILKPDKSTITEPH 453
W G K L Q A ++++ AL+V ER + L+ S TEP+
Sbjct: 1718 WFPGSKPLIQQAMAKIMKANPALYVLRERIRKGLQLYSSEPTEPY 1762
Score = 39 (18.8 bits), Expect = 2.9e-79, Sum P(4) = 2.9e-79
Identities = 13/52 (25%), Positives = 24/52 (46%)
Query: 294 LFCAYGNWFPGSKPLIQQALAKIMKANPALYVLRERIRKALQLYSSEPTEPY 345
LF Y +W A ++++ AL+V +R + L+ + TEP+
Sbjct: 1916 LFNLYDDWLKTISSYT--AFSRLILILRALHVNNDRAKVILKPDKTTVTEPH 1965
>TAIR|locus:2141791 [details] [associations]
symbol:AT4G38780 species:3702 "Arabidopsis thaliana"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=ISM] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0007062 "sister
chromatid cohesion" evidence=RCA] [GO:0007129 "synapsis"
evidence=RCA] [GO:0007131 "reciprocal meiotic recombination"
evidence=RCA] [GO:0010332 "response to gamma radiation"
evidence=RCA] [GO:0032204 "regulation of telomere maintenance"
evidence=RCA] [GO:0032504 "multicellular organism reproduction"
evidence=RCA] [GO:0042138 "meiotic DNA double-strand break
formation" evidence=RCA] [GO:0043247 "telomere maintenance in
response to DNA damage" evidence=RCA] [GO:0045132 "meiotic
chromosome segregation" evidence=RCA] InterPro:IPR000555
InterPro:IPR012591 InterPro:IPR012592 Pfam:PF01398 Pfam:PF08082
Pfam:PF08083 ProDom:PD149576 SMART:SM00232 GO:GO:0009506
EMBL:CP002687 GO:GO:0005681 GO:GO:0000398 KO:K12856
InterPro:IPR012984 InterPro:IPR021983 InterPro:IPR019581
InterPro:IPR019580 InterPro:IPR019582 Pfam:PF08084 Pfam:PF12134
Pfam:PF10598 Pfam:PF10597 Pfam:PF10596 IPI:IPI00520220
RefSeq:NP_195589.2 UniGene:At.31150 ProteinModelPortal:F4JUG5
SMR:F4JUG5 PRIDE:F4JUG5 EnsemblPlants:AT4G38780.1 GeneID:830033
KEGG:ath:AT4G38780 OMA:STTISPY ArrayExpress:F4JUG5 Uniprot:F4JUG5
Length = 2332
Score = 1116 (397.9 bits), Expect = 1.1e-288, Sum P(5) = 1.1e-288
Identities = 204/276 (73%), Positives = 238/276 (86%)
Query: 420 AFSRLILILRALHVNTERTKVILKPDKSTITEPHHIWPSLSDDEWIKVEVQLKDLILADY 479
AF RLILILRALHVN E+ K++LKPD S +TEP+HIWPSL+DD+W+KVEV L+DLIL+DY
Sbjct: 1931 AFQRLILILRALHVNNEKAKMLLKPDMSVVTEPNHIWPSLTDDQWMKVEVALRDLILSDY 1990
Query: 480 GKKNNVNVASLTQSEIRDIILGMEISAPSAQRQQIAEIEKQTKEQSQLTATTTRTVNKHG 539
KKN VN ++LTQSEIRDIILG EI+ PS QRQQIAEIEKQ KE SQLTA TTRT N HG
Sbjct: 1991 AKKNKVNTSALTQSEIRDIILGAEITPPSQQRQQIAEIEKQAKEASQLTAVTTRTTNVHG 2050
Query: 540 DEIITSTTSNYETATFGSKTEWRVRAISATNLHLRTNHIYVSSDDIKETGYTYILPKNVL 599
DE+I++T S YE + FGSKT+WRVRAISATNL+LR NHIYV+SDDIKETGYTYI+PKN+L
Sbjct: 2051 DELISTTISPYEQSAFGSKTDWRVRAISATNLYLRVNHIYVNSDDIKETGYTYIMPKNIL 2110
Query: 600 KKFVTISDLRAQIAGYLYGVSPADNPQVKEIRCIVMPPQWGTHQTVHLPASLPGHPYLKE 659
KKF+ I+DLR QIAGYLYG+SP DNPQVKEIRC+VM PQ G HQ V LP+SLP H +L +
Sbjct: 2111 KKFICIADLRTQIAGYLYGISPPDNPQVKEIRCVVMVPQCGNHQQVQLPSSLPEHQFLDD 2170
Query: 660 MEPLGWIHTQPNELPQLSPQDVTSHAKIMADNASWD 695
+EPLGWIHTQPNELPQLSPQDVT H +++ +N WD
Sbjct: 2171 LEPLGWIHTQPNELPQLSPQDVTFHTRVLENNKQWD 2206
Score = 624 (224.7 bits), Expect = 1.1e-288, Sum P(5) = 1.1e-288
Identities = 121/153 (79%), Positives = 133/153 (86%)
Query: 294 LFCAYGNWFPGSKPLIQQALAKIMKANPALYVLRERIRKALQLYSSEPTEPYLSSQNYGE 353
L A+GNWFPGSKPL+ QA+ KIMK+NPALYVLRERIRK LQLYSSEPTEPYLSSQNYGE
Sbjct: 1710 LHSAFGNWFPGSKPLLAQAMNKIMKSNPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGE 1769
Query: 354 LFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQ 413
+FSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPING IFIFNPRTGQLFLKIIHTSVWAGQ
Sbjct: 1770 IFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGVIFIFNPRTGQLFLKIIHTSVWAGQ 1829
Query: 414 KRLGQLA----FSRLILILRALHVNTERTKVIL 442
KRLGQLA + ++R+L V + +VI+
Sbjct: 1830 KRLGQLAKWKTAEEVAALVRSLPVEEQPKQVIV 1862
Score = 559 (201.8 bits), Expect = 1.8e-276, Sum P(4) = 1.8e-276
Identities = 101/109 (92%), Positives = 107/109 (98%)
Query: 32 SDLRWSKQTDVGITHFRSGMSHDEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAN 91
SDLR+S QTDVG++HFRSGMSH+EDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEA
Sbjct: 1337 SDLRYSNQTDVGVSHFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAQ 1396
Query: 92 AQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRIRTEFKQYQ 140
AQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWR+RT+FKQYQ
Sbjct: 1397 AQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRTDFKQYQ 1445
Score = 468 (169.8 bits), Expect = 3.8e-206, Sum P(5) = 3.8e-206
Identities = 89/115 (77%), Positives = 101/115 (87%)
Query: 906 EISAPSAQRQQIAEIEKQTKEQSQLTATTTRTVNKHGDEIITSTTSNYETATFGSKTEWR 965
EI+ PS QRQQIAEIEKQ KE SQLTA TTRT N HGDE+I++T S YE + FGSKT+WR
Sbjct: 2014 EITPPSQQRQQIAEIEKQAKEASQLTAVTTRTTNVHGDELISTTISPYEQSAFGSKTDWR 2073
Query: 966 VRAISATNLHLRTNHIYVSSDDIKETGYTYILPKNVLKKFVTISDLRAQIAGYLY 1020
VRAISATNL+LR NHIYV+SDDIKETGYTYI+PKN+LKKF+ I+DLR QIAGYLY
Sbjct: 2074 VRAISATNLYLRVNHIYVNSDDIKETGYTYIMPKNILKKFICIADLRTQIAGYLY 2128
Score = 466 (169.1 bits), Expect = 1.1e-288, Sum P(5) = 1.1e-288
Identities = 81/132 (61%), Positives = 98/132 (74%)
Query: 1101 HTSVWAGQKRLGQLGEKTVVITCSFTPGSCSLTAYKLTPSGFEWGRQNTDKGNNPKGYLP 1160
HT V K+ EK +++TCSFTPGSCSLT+YKLT +G+EWGR N D G+NP GYLP
Sbjct: 2195 HTRVLENNKQWD--AEKCIILTCSFTPGSCSLTSYKLTQAGYEWGRLNKDTGSNPHGYLP 2252
Query: 1161 SHYERVQMLLSDRFLGFFMVPAQSSWNYNFMGVRHDPNMKYDLQLANPKEFYHEIHRPAH 1220
+HYE+VQMLLSDRF GF+MVP WNYNFMG H ++ Y L L PKE+YH++HRP H
Sbjct: 2253 THYEKVQMLLSDRFFGFYMVPENGPWNYNFMGANHTVSINYSLTLGTPKEYYHQVHRPTH 2312
Query: 1221 FLNFSSLE-DGD 1231
FL FS +E DGD
Sbjct: 2313 FLQFSKMEEDGD 2324
Score = 427 (155.4 bits), Expect = 1.1e-288, Sum P(5) = 1.1e-288
Identities = 74/86 (86%), Positives = 78/86 (90%)
Query: 220 RHTLAYDKGWRIRTEFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILE 279
RHTLAYDKGWR+RT+FKQYQ LKQNPFWWTHQRHDGKLWNLNNYRTD+IQALGGVEGILE
Sbjct: 1426 RHTLAYDKGWRVRTDFKQYQALKQNPFWWTHQRHDGKLWNLNNYRTDVIQALGGVEGILE 1485
Query: 280 HTLFKGTYFPTWEGLFCAYGNWFPGS 305
HTLFKGTYFPTWEGLF + F S
Sbjct: 1486 HTLFKGTYFPTWEGLFWEKASGFEES 1511
Score = 339 (124.4 bits), Expect = 5.3e-151, Sum P(5) = 5.3e-151
Identities = 68/88 (77%), Positives = 74/88 (84%)
Query: 1032 SSDHTQDIRRQSDHQTFIFHSQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPR 1091
SS+ T+ ++ IF +QIIWFVDDTNVYRVTIHKTFEGNLTTKPING IFIFNPR
Sbjct: 1754 SSEPTEPYLSSQNYGE-IFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGVIFIFNPR 1812
Query: 1092 TGQLFLKIIHTSVWAGQKRLGQLGE-KT 1118
TGQLFLKIIHTSVWAGQKRLGQL + KT
Sbjct: 1813 TGQLFLKIIHTSVWAGQKRLGQLAKWKT 1840
Score = 279 (103.3 bits), Expect = 8.1e-148, Sum P(6) = 8.1e-148
Identities = 52/58 (89%), Positives = 56/58 (96%)
Query: 737 IVNKWNTALIGLMTYFRESVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPAVF 794
IVNKWNTALIGLMTYFRE+ V+TQELLDLLVKCENKIQTR+KIGLNSKMPSRFPP +F
Sbjct: 1258 IVNKWNTALIGLMTYFREATVHTQELLDLLVKCENKIQTRVKIGLNSKMPSRFPPVIF 1315
Score = 272 (100.8 bits), Expect = 1.1e-288, Sum P(5) = 1.1e-288
Identities = 48/84 (57%), Positives = 62/84 (73%)
Query: 139 YQDMNHTNSYGIIRGLQFASFIVQYYXXXXXXXXXXXQRASEMAGPPQMPNDFLTFQDTA 198
Y+DM++TN+YG+IRGLQFASF+VQ+Y RASE+AGPPQ PN+F+T+ DT
Sbjct: 1017 YKDMSYTNTYGLIRGLQFASFVVQFYGLVLDLLLLGLTRASEIAGPPQRPNEFMTYWDTK 1076
Query: 199 TELAHPIRLYCRYVDKVHLFLRHT 222
E HPIRLY RY+DKVH+ + T
Sbjct: 1077 VETRHPIRLYSRYIDKVHIMFKFT 1100
Score = 239 (89.2 bits), Expect = 1.5e-164, Sum P(5) = 1.5e-164
Identities = 46/57 (80%), Positives = 52/57 (91%)
Query: 793 VFDQELDALEIETVQKETIHPRKSYKMNSSCADVLLFAAYKWNVSRPSLLADSKGKF 849
V DQEL+ LEIETVQKETIHPRKSYKMNSSCADVLLFAA+KW +S+PSL+A+SK F
Sbjct: 1595 VLDQELEPLEIETVQKETIHPRKSYKMNSSCADVLLFAAHKWPMSKPSLIAESKDVF 1651
Score = 175 (66.7 bits), Expect = 1.4e-131, Sum P(4) = 1.4e-131
Identities = 29/45 (64%), Positives = 39/45 (86%)
Query: 1233 VILKPDKSTITEPHHIWPSLSDDEWIKVEVQLKDLILADYGKSRQ 1277
++LKPD S +TEP+HIWPSL+DD+W+KVEV L+DLIL+DY K +
Sbjct: 1951 MLLKPDMSVVTEPNHIWPSLTDDQWMKVEVALRDLILSDYAKKNK 1995
Score = 149 (57.5 bits), Expect = 6.1e-125, Sum P(6) = 6.1e-125
Identities = 48/133 (36%), Positives = 63/133 (47%)
Query: 848 KFPPVVFYTPKELGGLGMLSMGHVLIPQVRELFKYNWGFIYTVSLDFYDNMSH------- 900
+FPPV+FYTPKE+GGLGMLSMGH+LIPQ +L +Y+ VS F MSH
Sbjct: 1309 RFPPVIFYTPKEIGGLGMLSMGHILIPQ-SDL-RYSNQTDVGVS-HFRSGMSHEEDQLIP 1365
Query: 901 ----YVNSMEISAPSAQRQQIAEIEKQTKEQSQLTATTTRTVNKHGDEIIT--STTSNYE 954
Y+ E +QR K+ + Q+Q T + D I +T +
Sbjct: 1366 NLYRYIQPWESEFIDSQRVWAEYALKRQEAQAQNRRLTLEDLEDSWDRGIPRINTLFQKD 1425
Query: 955 TATFGSKTEWRVR 967
T WRVR
Sbjct: 1426 RHTLAYDKGWRVR 1438
Score = 140 (54.3 bits), Expect = 3.4e-169, Sum P(3) = 3.4e-169
Identities = 26/31 (83%), Positives = 28/31 (90%)
Query: 1 MVLFNLYDDWLKTISSYTAFSRLILILRALH 31
M LFN+YDDWL T+SSYTAF RLILILRALH
Sbjct: 1913 MALFNIYDDWLMTVSSYTAFQRLILILRALH 1943
Score = 138 (53.6 bits), Expect = 1.1e-127, Sum P(4) = 1.1e-127
Identities = 29/79 (36%), Positives = 44/79 (55%)
Query: 662 PLGWIHTQPNELPQLSPQDVTSHAKIMADNASWD----GVRHDPNMKYDLQLANPKEFYH 717
P G++ T ++ Q+ D ++ +N W+ G H ++ Y L L PKE+YH
Sbjct: 2247 PHGYLPTHYEKV-QMLLSDRFFGFYMVPENGPWNYNFMGANHTVSINYSLTLGTPKEYYH 2305
Query: 718 EIHRPAHFLNFSSLE-DGD 735
++HRP HFL FS +E DGD
Sbjct: 2306 QVHRPTHFLQFSKMEEDGD 2324
Score = 41 (19.5 bits), Expect = 8.8e-144, Sum P(5) = 8.8e-144
Identities = 15/45 (33%), Positives = 23/45 (51%)
Query: 410 W-AGQKRLGQLAFSRLILILRALHVNTERTKVILKPDKSTITEPH 453
W G K L A ++++ AL+V ER + L+ S TEP+
Sbjct: 1717 WFPGSKPLLAQAMNKIMKSNPALYVLRERIRKGLQLYSSEPTEPY 1761
Score = 37 (18.1 bits), Expect = 1.3e-247, Sum P(5) = 1.3e-247
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 254 DGKLWNLNNYRTDMIQALGGVEGILEH 280
DG +WNL N +T A+ + EH
Sbjct: 1210 DG-VWNLQNEQTKERTAVAFLRADDEH 1235
>FB|FBgn0033688 [details] [associations]
symbol:Prp8 "pre-mRNA processing factor 8" species:7227
"Drosophila melanogaster" [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC;ISS;IMP] [GO:0005681 "spliceosomal
complex" evidence=ISS] [GO:0005682 "U5 snRNP" evidence=ISS]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR000555 InterPro:IPR012591
InterPro:IPR012592 Pfam:PF01398 Pfam:PF08082 Pfam:PF08083
ProDom:PD149576 SMART:SM00232 EMBL:AE013599 GO:GO:0022008
GO:GO:0005682 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013
eggNOG:COG5178 GeneTree:ENSGT00390000015210 KO:K12856 OMA:EEFTHRD
InterPro:IPR012984 InterPro:IPR021983 InterPro:IPR019581
InterPro:IPR019580 InterPro:IPR019582 Pfam:PF08084 Pfam:PF12134
Pfam:PF10598 Pfam:PF10597 Pfam:PF10596 RefSeq:NP_610735.1
UniGene:Dm.574 ProteinModelPortal:A1Z8U0 SMR:A1Z8U0 STRING:A1Z8U0
PaxDb:A1Z8U0 PRIDE:A1Z8U0 EnsemblMetazoa:FBtr0088016 GeneID:36304
KEGG:dme:Dmel_CG8877 UCSC:CG8877-RA CTD:36304 FlyBase:FBgn0033688
InParanoid:A1Z8U0 OrthoDB:EOG47D7WV PhylomeDB:A1Z8U0
GenomeRNAi:36304 NextBio:797832 Bgee:A1Z8U0 Uniprot:A1Z8U0
Length = 2396
Score = 1341 (477.1 bits), Expect = 1.7e-278, Sum P(5) = 1.7e-278
Identities = 252/277 (90%), Positives = 268/277 (96%)
Query: 420 AFSRLILILRALHVNTERTKVILKPDKSTITEPHHIWPSLSDDEWIKVEVQLKDLILADY 479
AFSRLILILRALHVNTERTK+ILKPDK+TITE HHIWP+L+D+EWIKVEVQLKDLILADY
Sbjct: 1992 AFSRLILILRALHVNTERTKIILKPDKTTITEAHHIWPTLTDEEWIKVEVQLKDLILADY 2051
Query: 480 GKKNNVNVASLTQSEIRDIILGMEISAPSAQRQQIAEIEKQTKEQSQLTATTTRTVNKHG 539
GKKNNVNVASLTQSEIRDIILGMEISAPSAQRQQIAEIEKQTKEQ+QLTATTTRT NKHG
Sbjct: 2052 GKKNNVNVASLTQSEIRDIILGMEISAPSAQRQQIAEIEKQTKEQNQLTATTTRTTNKHG 2111
Query: 540 DEIITSTTSNYETATFGSKTEWRVRAISATNLHLRTNHIYVSSDDIKETGYTYILPKNVL 599
DEIITSTTSNYET TF SKTEWRVRAISATNLHLRTNHIYVSSDDIKETGYTYILPKN+L
Sbjct: 2112 DEIITSTTSNYETQTFSSKTEWRVRAISATNLHLRTNHIYVSSDDIKETGYTYILPKNIL 2171
Query: 600 KKFVTISDLRAQIAGYLYGVSPADNPQVKEIRCIVMPPQWGTHQTVHLPASLPGHPYLKE 659
KKFVTISDLRAQIAGYLYGVSP DNPQVKEIRCIVMPPQWGTHQT++LP +LP H YLK+
Sbjct: 2172 KKFVTISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMPPQWGTHQTINLPNTLPTHQYLKD 2231
Query: 660 MEPLGWIHTQPNELPQLSPQDVTSHAKIMADNASWDG 696
MEPLGWIHTQPNELPQLSPQD+T+HAKIM +N++WDG
Sbjct: 2232 MEPLGWIHTQPNELPQLSPQDITTHAKIMQENSNWDG 2268
Score = 1114 (397.2 bits), Expect = 1.2e-253, Sum P(5) = 1.2e-253
Identities = 233/329 (70%), Positives = 254/329 (77%)
Query: 905 MEISAPSAQRQQIAEIEKQTKEQSQLTATTTRTVNKHGDEIITSTTSNYETATFGSKTEW 964
MEISAPSAQRQQIAEIEKQTKEQ+QLTATTTRT NKHGDEIITSTTSNYET TF SKTEW
Sbjct: 2074 MEISAPSAQRQQIAEIEKQTKEQNQLTATTTRTTNKHGDEIITSTTSNYETQTFSSKTEW 2133
Query: 965 RVRAISATNLHLRTNHIYVSSDDIKETGYTYILPKNVLKKFVTISDLRAQIAGYLYDHLV 1024
RVRAISATNLHLRTNHIYVSSDDIKETGYTYILPKN+LKKFVTISDLRAQIAGYLY
Sbjct: 2134 RVRAISATNLHLRTNHIYVSSDDIKETGYTYILPKNILKKFVTISDLRAQIAGYLYG--- 2190
Query: 1025 CGRHERVSSDHTQDIRRQSDHQTFIFHSQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGA 1084
VS ++ + + + Q W T T+ T + +P+ G
Sbjct: 2191 ------VSPPDNPQVK---EIRCIVMPPQ--WGTHQTINLPNTL-PTHQYLKDMEPL-GW 2237
Query: 1085 IFIFNPRTGQLFLKIIHTSVWAGQKRLGQLGEKTVVITCSFTPGSCSLTAYKLTPSGFEW 1144
I QL + I T Q+ GEKT+VITCSFTPGSCSLTAYKLTPSGFEW
Sbjct: 2238 IHTQPNELPQLSPQDITTHAKIMQENSNWDGEKTIVITCSFTPGSCSLTAYKLTPSGFEW 2297
Query: 1145 GRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQSSWNYNFMGVRHDPNMKYDLQ 1204
G +NTDKGNNPKGYLPSHYERVQMLLS++FLGFFMVPAQSSWNYNFMGVRHDPNMKY+LQ
Sbjct: 2298 GSKNTDKGNNPKGYLPSHYERVQMLLSNKFLGFFMVPAQSSWNYNFMGVRHDPNMKYELQ 2357
Query: 1205 LANPKEFYHEIHRPAHFLNFSSLEDG-DG 1232
LANPKEFYHE+HR +HFL FS+LEDG DG
Sbjct: 2358 LANPKEFYHELHRTSHFLLFSNLEDGGDG 2386
Score = 642 (231.1 bits), Expect = 1.7e-278, Sum P(5) = 1.7e-278
Identities = 126/153 (82%), Positives = 135/153 (88%)
Query: 294 LFCAYGNWFPGSKPLIQQALAKIMKANPALYVLRERIRKALQLYSSEPTEPYLSSQNYGE 353
L AYGNWFPG K LIQQA+AKIMKANPALYVLRERIRKALQLYSSEPTEPYLSSQNYGE
Sbjct: 1771 LHSAYGNWFPGCKTLIQQAMAKIMKANPALYVLRERIRKALQLYSSEPTEPYLSSQNYGE 1830
Query: 354 LFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQ 413
LFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQ
Sbjct: 1831 LFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQ 1890
Query: 414 KRLGQLA----FSRLILILRALHVNTERTKVIL 442
KRLGQLA + ++R+L V + ++I+
Sbjct: 1891 KRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIV 1923
Score = 592 (213.5 bits), Expect = 1.1e-259, Sum P(3) = 1.1e-259
Identities = 109/109 (100%), Positives = 109/109 (100%)
Query: 32 SDLRWSKQTDVGITHFRSGMSHDEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAN 91
SDLRWSKQTDVGITHFRSGMSHDEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAN
Sbjct: 1398 SDLRWSKQTDVGITHFRSGMSHDEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAN 1457
Query: 92 AQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRIRTEFKQYQ 140
AQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRIRTEFKQYQ
Sbjct: 1458 AQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRIRTEFKQYQ 1506
Score = 439 (159.6 bits), Expect = 1.7e-278, Sum P(5) = 1.7e-278
Identities = 78/86 (90%), Positives = 79/86 (91%)
Query: 220 RHTLAYDKGWRIRTEFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILE 279
RHTLAYDKGWRIRTEFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILE
Sbjct: 1487 RHTLAYDKGWRIRTEFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILE 1546
Query: 280 HTLFKGTYFPTWEGLFCAYGNWFPGS 305
HTLFKGTYFPTWEGLF + F S
Sbjct: 1547 HTLFKGTYFPTWEGLFWEKASGFEES 1572
Score = 342 (125.4 bits), Expect = 7.8e-134, Sum P(6) = 7.8e-134
Identities = 71/109 (65%), Positives = 83/109 (76%)
Query: 1011 LRAQIAGYLYDHLVCGRHERVSSDHTQDIRRQSDHQTFIFHSQIIWFVDDTNVYRVTIHK 1070
++A A Y+ + + SS+ T+ ++ +F +QIIWFVDDTNVYRVTIHK
Sbjct: 1794 MKANPALYVLRERIRKALQLYSSEPTEPYLSSQNYGE-LFSNQIIWFVDDTNVYRVTIHK 1852
Query: 1071 TFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLGE-KT 1118
TFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQL + KT
Sbjct: 1853 TFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKT 1901
Score = 335 (123.0 bits), Expect = 1.7e-278, Sum P(5) = 1.7e-278
Identities = 61/82 (74%), Positives = 66/82 (80%)
Query: 139 YQDMNHTNSYGIIRGLQFASFIVQYYXXXXXXXXXXXQRASEMAGPPQMPNDFLTFQDTA 198
Y+DMNHTNSYGIIRGLQF+SFI QYY R+SEMAGPPQMPNDFLTFQDT
Sbjct: 1079 YKDMNHTNSYGIIRGLQFSSFITQYYGLVLDLLVLGLHRSSEMAGPPQMPNDFLTFQDTV 1138
Query: 199 TELAHPIRLYCRYVDKVHLFLR 220
TE AHPIRLYCRYVD++HLF R
Sbjct: 1139 TETAHPIRLYCRYVDRIHLFFR 1160
Score = 291 (107.5 bits), Expect = 1.2e-198, Sum P(5) = 1.2e-198
Identities = 59/67 (88%), Positives = 61/67 (91%)
Query: 737 IVNKWNTALIGLMTYFRESVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPAVF-- 794
IVNKWNTALIGLMTYFRE+VVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPP VF
Sbjct: 1319 IVNKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYT 1378
Query: 795 DQELDAL 801
+EL L
Sbjct: 1379 PKELGGL 1385
Score = 267 (99.0 bits), Expect = 3.4e-214, Sum P(5) = 3.4e-214
Identities = 51/54 (94%), Positives = 53/54 (98%)
Query: 793 VFDQELDALEIETVQKETIHPRKSYKMNSSCADVLLFAAYKWNVSRPSLLADSK 846
VFDQELDALEIETVQKETIHPRKSYKMNSSCAD+LLF AYKWNVSRPSLLAD+K
Sbjct: 1656 VFDQELDALEIETVQKETIHPRKSYKMNSSCADILLFPAYKWNVSRPSLLADTK 1709
Score = 203 (76.5 bits), Expect = 7.4e-144, Sum P(5) = 7.4e-144
Identities = 36/42 (85%), Positives = 41/42 (97%)
Query: 1233 VILKPDKSTITEPHHIWPSLSDDEWIKVEVQLKDLILADYGK 1274
+ILKPDK+TITE HHIWP+L+D+EWIKVEVQLKDLILADYGK
Sbjct: 2012 IILKPDKTTITEAHHIWPTLTDEEWIKVEVQLKDLILADYGK 2053
Score = 196 (74.1 bits), Expect = 4.0e-143, Sum P(5) = 4.0e-143
Identities = 42/84 (50%), Positives = 53/84 (63%)
Query: 658 KEMEPLGWIHTQPNELPQLSPQDVTSHAKIMADNASWD----GVRHDPNMKYDLQLANPK 713
K P G++ + + L + A + SW+ GVRHDPNMKY+LQLANPK
Sbjct: 2304 KGNNPKGYLPSHYERVQMLLSNKFLGFFMVPAQS-SWNYNFMGVRHDPNMKYELQLANPK 2362
Query: 714 EFYHEIHRPAHFLNFSSLEDG-DG 736
EFYHE+HR +HFL FS+LEDG DG
Sbjct: 2363 EFYHELHRTSHFLLFSNLEDGGDG 2386
Score = 158 (60.7 bits), Expect = 5.7e-149, Sum P(2) = 5.7e-149
Identities = 32/38 (84%), Positives = 34/38 (89%)
Query: 1 MVLFNLYDDWLKTISSYTAFSRLILILRALHSDLRWSK 38
MVLFNLYDDWLKTISSYTAFSRLILILRALH + +K
Sbjct: 1974 MVLFNLYDDWLKTISSYTAFSRLILILRALHVNTERTK 2011
Score = 150 (57.9 bits), Expect = 1.4e-105, Sum P(6) = 1.4e-105
Identities = 46/130 (35%), Positives = 62/130 (47%)
Query: 848 KFPPVVFYTPKELGGLGMLSMGHVLIPQ--VRELFKYNWGFIYTVSLDFYD------NMS 899
+FPPVVFYTPKELGGLGMLSMGHVLIPQ +R + + G + S +D N+
Sbjct: 1370 RFPPVVFYTPKELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHDEDQLIPNLY 1429
Query: 900 HYVNSMEISAPSAQRQQIAEIEKQTKEQSQLTATTTRTVNKHGDEIIT--STTSNYETAT 957
Y+ E +QR K+ + +Q T + D I +T + T
Sbjct: 1430 RYIQPWESEFIDSQRVWAEYALKRQEANAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHT 1489
Query: 958 FGSKTEWRVR 967
WR+R
Sbjct: 1490 LAYDKGWRIR 1499
Score = 49 (22.3 bits), Expect = 2.8e-191, Sum P(5) = 2.8e-191
Identities = 16/45 (35%), Positives = 24/45 (53%)
Query: 410 W-AGQKRLGQLAFSRLILILRALHVNTERTKVILKPDKSTITEPH 453
W G K L Q A ++++ AL+V ER + L+ S TEP+
Sbjct: 1778 WFPGCKTLIQQAMAKIMKANPALYVLRERIRKALQLYSSEPTEPY 1822
Score = 44 (20.5 bits), Expect = 1.7e-278, Sum P(5) = 1.7e-278
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 99 LEDLEDSWDRGIPRINTLFQKDRHTLAYDK 128
+ +L+D WD G N L + R Y+K
Sbjct: 1019 INNLQDVWDVGEGECNVLLES-RFEKLYEK 1047
Score = 43 (20.2 bits), Expect = 1.8e-113, Sum P(3) = 1.8e-113
Identities = 18/60 (30%), Positives = 25/60 (41%)
Query: 786 PSRFPPAVFDQE-LDALEIETVQKETIHPRKSYKMNSSCADVLLF--AAY-KWNVSRPSL 841
P + V D E L+A++IE E K + + D Y KWN+S P L
Sbjct: 235 PLDYADNVLDVEPLEAIQIELDNDEDNAVYKWFYDHRPLVDTQFVNGTTYRKWNLSLPQL 294
Score = 43 (20.2 bits), Expect = 1.8e-113, Sum P(3) = 1.8e-113
Identities = 32/116 (27%), Positives = 47/116 (40%)
Query: 713 KEFYHEIHRPAHFLNFSSLEDGDGIVNKWNTALIGLMTYFRESVVNTQELLD--LLVKCE 770
K FY HRP L + +G KWN +L L T +R + +L+D +
Sbjct: 265 KWFYD--HRP---LVDTQFVNGT-TYRKWNLSLPQLATLYRLANQLLTDLVDNNFFYLFD 318
Query: 771 NKIQTRIKIGLNSKMPS--RFPPAVFDQEL---DALEIETVQKETIH-P-RKSYKM 819
K K LN +P +F P + D + D E + K I P R Y++
Sbjct: 319 PKSFFTAK-ALNMAIPGGPKFEPLIKDHNVGDEDWNEFNDINKVIIRQPIRTEYRI 373
Score = 37 (18.1 bits), Expect = 1.8e-113, Sum P(3) = 1.8e-113
Identities = 6/17 (35%), Positives = 12/17 (70%)
Query: 888 YTVSLDF-YDNMSHYVN 903
Y ++ + Y+NM H+V+
Sbjct: 371 YRIAFPYLYNNMPHFVH 387
>DICTYBASE|DDB_G0274229 [details] [associations]
symbol:prpf8 "putative U5 small nuclear
ribonucleoprotein" species:44689 "Dictyostelium discoideum"
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA;ISS] [GO:0006397 "mRNA processing" evidence=IEA;ISS]
[GO:0005682 "U5 snRNP" evidence=ISS] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000555 InterPro:IPR012591 InterPro:IPR012592
Pfam:PF01398 Pfam:PF08082 Pfam:PF08083 ProDom:PD149576
SMART:SM00232 dictyBase:DDB_G0274229 GO:GO:0008380 GO:GO:0016607
GO:GO:0006397 GenomeReviews:CM000151_GR GO:GO:0005681 GO:GO:0005682
GO:GO:0003723 EMBL:AAFI02000012 GO:GO:0000398 eggNOG:COG5178
KO:K12856 OMA:EEFTHRD InterPro:IPR012984 InterPro:IPR021983
InterPro:IPR019581 InterPro:IPR019580 InterPro:IPR019582
Pfam:PF08084 Pfam:PF12134 Pfam:PF10598 Pfam:PF10597 Pfam:PF10596
RefSeq:XP_644240.1 ProteinModelPortal:Q8T295 SMR:Q8T295
STRING:Q8T295 PRIDE:Q8T295 EnsemblProtists:DDB0233128
GeneID:8619668 KEGG:ddi:DDB_G0274229 ProtClustDB:CLSZ2428995
Uniprot:Q8T295
Length = 2327
Score = 1090 (388.8 bits), Expect = 3.1e-273, Sum P(5) = 3.1e-273
Identities = 206/279 (73%), Positives = 236/279 (84%)
Query: 420 AFSRLILILRALHVNTERTKVILKPDKSTITEPHHIWPSLSDDEWIKVEVQLKDLILADY 479
AF RLILILRALHVN ERTK+ILKP+K+ IT+PHHIWP+L++ EW+ VE LKDLILAD+
Sbjct: 1920 AFLRLILILRALHVNLERTKIILKPNKNVITQPHHIWPTLTEQEWLTVEGSLKDLILADF 1979
Query: 480 GKKNNVNVASLTQSEIRDIILGMEISAPSAQRQ-QIAEIEKQTKEQSQLTATTTRTVNKH 538
GK+NNVNVASLTQSEIRDIILGMEISAPS QR+ QIAEIEKQ E S LTA T R+ N H
Sbjct: 1980 GKRNNVNVASLTQSEIRDIILGMEISAPSQQREDQIAEIEKQKTEASHLTAVTVRSTNIH 2039
Query: 539 GDEIITSTTSNYETATFGSKTEWRVRAISATNLHLRTNHIYVSSDDIKETG-YTYILPKN 597
G+EIIT+ TS +E F SKT+WRVRAISATNLHLRTN IYV+SD+ KETG +TY+ PKN
Sbjct: 2040 GEEIITTATSPHEQKVFSSKTDWRVRAISATNLHLRTNQIYVNSDNAKETGGFTYVFPKN 2099
Query: 598 VLKKFVTISDLRAQIAGYLYGVSPADNPQVKEIRCIVMPPQWGTHQTVHLPASLPGHPYL 657
+LKKF+TI+DLR QI GY YG+SP DNP VKEIRCIVMPPQWGT V +P LP H YL
Sbjct: 2100 ILKKFITIADLRTQIMGYCYGISPPDNPSVKEIRCIVMPPQWGTPVHVTVPNQLPEHEYL 2159
Query: 658 KEMEPLGWIHTQPNELPQLSPQDVTSHAKIMADNASWDG 696
K++EPLGWIHTQP ELPQLSPQDV +H+KIM+DN SWDG
Sbjct: 2160 KDLEPLGWIHTQPTELPQLSPQDVITHSKIMSDNKSWDG 2198
Score = 594 (214.2 bits), Expect = 3.1e-273, Sum P(5) = 3.1e-273
Identities = 112/152 (73%), Positives = 132/152 (86%)
Query: 294 LFCAYGNWFPGSKPLIQQALAKIMKANPALYVLRERIRKALQLYSSEPTEPYLSSQNYGE 353
++ ++GNWF G KPL+Q+A+AKI+K+NPALYVLRERIRK LQLYSSEPTEPYLSSQN+GE
Sbjct: 1699 IYSSFGNWFLGVKPLVQKAMAKILKSNPALYVLRERIRKGLQLYSSEPTEPYLSSQNFGE 1758
Query: 354 LFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQ 413
LFSN+I+WFVDD+NVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHT VW GQ
Sbjct: 1759 LFSNKIMWFVDDSNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTDVWLGQ 1818
Query: 414 KRLGQLA----FSRLILILRALHVNTERTKVI 441
KRLGQLA + ++R+L V + ++I
Sbjct: 1819 KRLGQLAKWKTAEEVAALIRSLPVEEQPKQII 1850
Score = 509 (184.2 bits), Expect = 2.9e-256, Sum P(4) = 2.9e-256
Identities = 91/109 (83%), Positives = 100/109 (91%)
Query: 32 SDLRWSKQTDVGITHFRSGMSHDEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAN 91
SDL++SKQTD GITHF SGMSHDEDQLIPNLYRYIQPWE E DSQRVWAEYA+K +EA
Sbjct: 1327 SDLKYSKQTDTGITHFTSGMSHDEDQLIPNLYRYIQPWEQEIKDSQRVWAEYAIKYEEAK 1386
Query: 92 AQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRIRTEFKQYQ 140
+QN+ LTLEDLEDSWDRGIPRINTLFQK RHTLAYDKGWR+RT++KQYQ
Sbjct: 1387 SQNKNLTLEDLEDSWDRGIPRINTLFQKSRHTLAYDKGWRVRTDWKQYQ 1435
Score = 414 (150.8 bits), Expect = 3.1e-273, Sum P(5) = 3.1e-273
Identities = 72/86 (83%), Positives = 78/86 (90%)
Query: 220 RHTLAYDKGWRIRTEFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILE 279
RHTLAYDKGWR+RT++KQYQVLK NPFWWT+QRHDGKLWNLNNYRTD+IQALGGVEGILE
Sbjct: 1416 RHTLAYDKGWRVRTDWKQYQVLKNNPFWWTNQRHDGKLWNLNNYRTDIIQALGGVEGILE 1475
Query: 280 HTLFKGTYFPTWEGLFCAYGNWFPGS 305
HTLFKGTYFPTWEGLF + F S
Sbjct: 1476 HTLFKGTYFPTWEGLFWEKASGFEES 1501
Score = 410 (149.4 bits), Expect = 3.4e-187, Sum P(5) = 3.4e-187
Identities = 82/118 (69%), Positives = 95/118 (80%)
Query: 905 MEISAPSAQRQ-QIAEIEKQTKEQSQLTATTTRTVNKHGDEIITSTTSNYETATFGSKTE 963
MEISAPS QR+ QIAEIEKQ E S LTA T R+ N HG+EIIT+ TS +E F SKT+
Sbjct: 2002 MEISAPSQQREDQIAEIEKQKTEASHLTAVTVRSTNIHGEEIITTATSPHEQKVFSSKTD 2061
Query: 964 WRVRAISATNLHLRTNHIYVSSDDIKETG-YTYILPKNVLKKFVTISDLRAQIAGYLY 1020
WRVRAISATNLHLRTN IYV+SD+ KETG +TY+ PKN+LKKF+TI+DLR QI GY Y
Sbjct: 2062 WRVRAISATNLHLRTNQIYVNSDNAKETGGFTYVFPKNILKKFITIADLRTQIMGYCY 2119
Score = 381 (139.2 bits), Expect = 3.1e-273, Sum P(5) = 3.1e-273
Identities = 74/129 (57%), Positives = 90/129 (69%)
Query: 1099 IIHTSVWAGQKRLGQLGEKTVVITCSFTPGSCSLTAYKLTPSGFEWGRQNTDKGNNPKGY 1158
I H+ + + K GEKTV+I+ S C+LTAY LTPSGFEWG+ N D N +GY
Sbjct: 2184 ITHSKIMSDNKSWD--GEKTVIISVSVA-WPCTLTAYHLTPSGFEWGKNNKDSLNY-QGY 2239
Query: 1159 LPSHYERVQMLLSDRFLGFFMVPAQSSWNYNFMGVRHDPNMKYDLQLANPKEFYHEIHRP 1218
P YE+VQMLLSDRFLGF+MVP + SWNYNFMGV+H NM Y L+L PK FY E HRP
Sbjct: 2240 QPQFYEKVQMLLSDRFLGFYMVPDRGSWNYNFMGVKHSTNMTYGLKLDYPKNFYDESHRP 2299
Query: 1219 AHFLNFSSL 1227
AHF N++ +
Sbjct: 2300 AHFQNWTQM 2308
Score = 320 (117.7 bits), Expect = 2.2e-114, Sum P(5) = 2.2e-114
Identities = 60/71 (84%), Positives = 66/71 (92%)
Query: 1049 IFHSQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQ 1108
+F ++I+WFVDD+NVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHT VW GQ
Sbjct: 1759 LFSNKIMWFVDDSNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTDVWLGQ 1818
Query: 1109 KRLGQLGE-KT 1118
KRLGQL + KT
Sbjct: 1819 KRLGQLAKWKT 1829
Score = 280 (103.6 bits), Expect = 3.1e-273, Sum P(5) = 3.1e-273
Identities = 51/84 (60%), Positives = 60/84 (71%)
Query: 139 YQDMNHTNSYGIIRGLQFASFIVQYYXXXXXXXXXXXQRASEMAGPPQMPNDFLTFQDTA 198
Y+DMNHTNSYG+IRGLQFASFI QYY +RAS +AGPP +PN FLTF
Sbjct: 1008 YKDMNHTNSYGLIRGLQFASFIFQYYGLVLDLLVLGLERASALAGPPNLPNSFLTFPSVQ 1067
Query: 199 TELAHPIRLYCRYVDKVHLFLRHT 222
TE AHPIRLY RYVD++H+ + T
Sbjct: 1068 TETAHPIRLYSRYVDRIHVLYKFT 1091
Score = 267 (99.0 bits), Expect = 1.2e-130, Sum P(5) = 1.2e-130
Identities = 51/67 (76%), Positives = 60/67 (89%)
Query: 737 IVNKWNTALIGLMTYFRESVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPAVF-- 794
IVNKWNTALIGLMTY+RE+VV T+E+LD+LV+CENKIQTR+KIGLNSKMP+RFPP VF
Sbjct: 1248 IVNKWNTALIGLMTYYREAVVTTREMLDILVRCENKIQTRVKIGLNSKMPNRFPPVVFYT 1307
Query: 795 DQELDAL 801
+EL L
Sbjct: 1308 PKELGGL 1314
Score = 214 (80.4 bits), Expect = 4.4e-146, Sum P(5) = 4.4e-146
Identities = 41/57 (71%), Positives = 46/57 (80%)
Query: 793 VFDQELDALEIETVQKETIHPRKSYKMNSSCADVLLFAAYKWNVSRPSLLADSKGKF 849
VFDQELD LEI V KE IHPRKSYKMNSSCAD+LL A +KW VSRPSLL D++ +
Sbjct: 1585 VFDQELDNLEISVVNKEAIHPRKSYKMNSSCADILLRATHKWQVSRPSLLNDNRDTY 1641
Score = 168 (64.2 bits), Expect = 5.7e-127, Sum P(4) = 5.7e-127
Identities = 28/42 (66%), Positives = 37/42 (88%)
Query: 1233 VILKPDKSTITEPHHIWPSLSDDEWIKVEVQLKDLILADYGK 1274
+ILKP+K+ IT+PHHIWP+L++ EW+ VE LKDLILAD+GK
Sbjct: 1940 IILKPNKNVITQPHHIWPTLTEQEWLTVEGSLKDLILADFGK 1981
Score = 160 (61.4 bits), Expect = 8.2e-65, Sum P(3) = 8.2e-65
Identities = 64/222 (28%), Positives = 98/222 (44%)
Query: 760 QELLDLLVKCENKIQTRIKIGLNSKMPSRFPPAVFDQELDALEIETVQKETIHPRKSYKM 819
Q L + + + + + RI++ L + + F V + + T +E + +
Sbjct: 1216 QAFLRVDTESQERFENRIRMILMASGSTTFTKIVNKWNTALIGLMTYYREAVVTTREM-- 1273
Query: 820 NSSCADVLLFAAYKWNVSRPSLLADSK--GKFPPVVFYTPKELGGLGMLSMGHVLIPQVR 877
D+L+ K +R + +SK +FPPVVFYTPKELGGLGMLSMGHVLIPQ
Sbjct: 1274 ----LDILVRCENKIQ-TRVKIGLNSKMPNRFPPVVFYTPKELGGLGMLSMGHVLIPQ-S 1327
Query: 878 ELFKYN----WGFIYTVSLDFYD------NMSHYVNSMEISAPSAQRQQIAEIEKQTKEQ 927
+L KY+ G + S +D N+ Y+ E +QR K + +
Sbjct: 1328 DL-KYSKQTDTGITHFTSGMSHDEDQLIPNLYRYIQPWEQEIKDSQRVWAEYAIKYEEAK 1386
Query: 928 SQLTATTTRTVNKHGDEIITSTTSNYETA--TFGSKTEWRVR 967
SQ T + D I + ++ + T WRVR
Sbjct: 1387 SQNKNLTLEDLEDSWDRGIPRINTLFQKSRHTLAYDKGWRVR 1428
Score = 145 (56.1 bits), Expect = 5.8e-158, Sum P(3) = 5.8e-158
Identities = 29/38 (76%), Positives = 32/38 (84%)
Query: 1 MVLFNLYDDWLKTISSYTAFSRLILILRALHSDLRWSK 38
MVLFN+YDDWL TI SYTAF RLILILRALH +L +K
Sbjct: 1902 MVLFNIYDDWLSTIHSYTAFLRLILILRALHVNLERTK 1939
Score = 121 (47.7 bits), Expect = 7.4e-246, Sum P(5) = 7.4e-246
Identities = 23/49 (46%), Positives = 31/49 (63%)
Query: 687 IMADNASWD----GVRHDPNMKYDLQLANPKEFYHEIHRPAHFLNFSSL 731
++ D SW+ GV+H NM Y L+L PK FY E HRPAHF N++ +
Sbjct: 2260 MVPDRGSWNYNFMGVKHSTNMTYGLKLDYPKNFYDESHRPAHFQNWTQM 2308
Score = 47 (21.6 bits), Expect = 1.3e-128, Sum P(5) = 1.3e-128
Identities = 16/45 (35%), Positives = 24/45 (53%)
Query: 410 W-AGQKRLGQLAFSRLILILRALHVNTERTKVILKPDKSTITEPH 453
W G K L Q A ++++ AL+V ER + L+ S TEP+
Sbjct: 1706 WFLGVKPLVQKAMAKILKSNPALYVLRERIRKGLQLYSSEPTEPY 1750
Score = 39 (18.8 bits), Expect = 7.5e-66, Sum P(3) = 7.5e-66
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 801 LEIETVQKETIHPRKSY 817
L +VQ ET HP + Y
Sbjct: 1061 LTFPSVQTETAHPIRLY 1077
>POMBASE|SPAC4F8.12c [details] [associations]
symbol:spp42 "U5 snRNP complex subunit Spp42"
species:4896 "Schizosaccharomyces pombe" [GO:0000393 "spliceosomal
conformational changes to generate catalytic conformation"
evidence=IGI] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004843
"ubiquitin-specific protease activity" evidence=ISM] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0005682 "U5 snRNP"
evidence=ISS] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=ISS] InterPro:IPR000555 InterPro:IPR012591
InterPro:IPR012592 Pfam:PF01398 Pfam:PF08082 Pfam:PF08083
ProDom:PD149576 SMART:SM00232 PomBase:SPAC4F8.12c EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0005681 GO:GO:0005682 GO:GO:0003723
GO:GO:0004843 GO:GO:0046540 GO:GO:0000393 eggNOG:COG5178
HOGENOM:HOG000184103 KO:K12856 InterPro:IPR012984
InterPro:IPR021983 InterPro:IPR019581 InterPro:IPR019580
InterPro:IPR019582 Pfam:PF08084 Pfam:PF12134 Pfam:PF10598
Pfam:PF10597 Pfam:PF10596 OrthoDB:EOG4Q2HPK PIR:T38841
RefSeq:NP_593861.1 ProteinModelPortal:O14187 SMR:O14187
IntAct:O14187 STRING:O14187 PRIDE:O14187 EnsemblFungi:SPAC4F8.12c.1
GeneID:2543413 KEGG:spo:SPAC4F8.12c OMA:WAPHPFN NextBio:20804428
Uniprot:O14187
Length = 2363
Score = 962 (343.7 bits), Expect = 1.5e-242, Sum P(5) = 1.5e-242
Identities = 184/280 (65%), Positives = 230/280 (82%)
Query: 420 AFSRLILILRALHVNTERTKVILKPDKSTITEPHHIWPSLSDDEWIKVEVQLKDLILADY 479
AFSRLILILRAL+VNTE+TK+IL+PDKS IT+ +H+WP+L D +W+ VE +L+DLILADY
Sbjct: 1956 AFSRLILILRALNVNTEKTKLILRPDKSIITKENHVWPNLDDQQWLDVEPKLRDLILADY 2015
Query: 480 GKKNNVNVASLTQSEIRDIILGMEISAPSAQRQQIAEIEKQTKEQSQLTATTTRTVNKHG 539
KKNN+NVASLT SE+RDIILGM I+APS QRQQIAEIEKQ +E +Q+TA TT+T N HG
Sbjct: 2016 AKKNNINVASLTNSEVRDIILGMTITAPSLQRQQIAEIEKQGRENAQVTAVTTKTTNVHG 2075
Query: 540 DEIITSTTSNYETATFGSKTEWRVRAISATNLHLRTNHIYVSSDDIKET-GYTYILPKNV 598
DE++ +TTS YE F SKTEWR RAIS+ +L LRT +IYV+SD+I ET YTYILP+N+
Sbjct: 2076 DEMVVTTTSAYENEKFSSKTEWRNRAISSISLPLRTKNIYVNSDNISETFPYTYILPQNL 2135
Query: 599 LKKFVTISDLRAQIAGYLYGVSPADNPQVKEIRCIVMPPQWGTHQTVHLPASLPG--HP- 655
L+KFVTISDLR Q+AGY+YG SP+DNPQ+KEIRCI + PQ G+ + V LP+ LP P
Sbjct: 2136 LRKFVTISDLRTQVAGYMYGKSPSDNPQIKEIRCIALVPQLGSIRNVQLPSKLPHDLQPS 2195
Query: 656 YLKEMEPLGWIHTQPNELPQLSPQDVTSHAKIMADNASWD 695
L+++EPLGWIHTQ +ELP LS DVT+HAKI++ + WD
Sbjct: 2196 ILEDLEPLGWIHTQSSELPYLSSVDVTTHAKILSSHPEWD 2235
Score = 580 (209.2 bits), Expect = 1.5e-242, Sum P(5) = 1.5e-242
Identities = 114/150 (76%), Positives = 126/150 (84%)
Query: 297 AYGNWFPGSKPLIQQALAKIMKANPALYVLRERIRKALQLYSSEPTEPYLSSQNYGELFS 356
AYGNW PG KPLIQQ++ KIMKANPALYVLRERIRK LQLY+SEP E YLSS NY ELFS
Sbjct: 1738 AYGNWIPGMKPLIQQSMNKIMKANPALYVLRERIRKGLQLYASEPQEQYLSSSNYAELFS 1797
Query: 357 NQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRL 416
NQI FVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLK+IHTSVWAGQKRL
Sbjct: 1798 NQIQLFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKVIHTSVWAGQKRL 1857
Query: 417 GQLA----FSRLILILRALHVNTERTKVIL 442
GQLA + ++R+L V + ++I+
Sbjct: 1858 GQLAKWKTAEEVAALIRSLPVEEQPRQIIV 1887
Score = 537 (194.1 bits), Expect = 6.8e-233, Sum P(4) = 6.8e-233
Identities = 98/109 (89%), Positives = 103/109 (94%)
Query: 32 SDLRWSKQTDVGITHFRSGMSHDEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAN 91
SDLRWSKQTD GITHFRSGM+ + + LIPNLYRYIQPWESEFIDSQRVWAEYA+KRQEA
Sbjct: 1362 SDLRWSKQTDTGITHFRSGMTTNGEHLIPNLYRYIQPWESEFIDSQRVWAEYAMKRQEAL 1421
Query: 92 AQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRIRTEFKQYQ 140
QNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWR+RTEFKQYQ
Sbjct: 1422 QQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRTEFKQYQ 1470
Score = 400 (145.9 bits), Expect = 2.8e-169, Sum P(5) = 2.8e-169
Identities = 82/150 (54%), Positives = 110/150 (73%)
Query: 874 PQVRELFKYNWGFIYTVSLDFYDN--MSHYVNSMEISAPSAQRQQIAEIEKQTKEQSQLT 931
P++R+L ++ +++ N + + M I+APS QRQQIAEIEKQ +E +Q+T
Sbjct: 2005 PKLRDLILADYAKKNNINVASLTNSEVRDIILGMTITAPSLQRQQIAEIEKQGRENAQVT 2064
Query: 932 ATTTRTVNKHGDEIITSTTSNYETATFGSKTEWRVRAISATNLHLRTNHIYVSSDDIKET 991
A TT+T N HGDE++ +TTS YE F SKTEWR RAIS+ +L LRT +IYV+SD+I ET
Sbjct: 2065 AVTTKTTNVHGDEMVVTTTSAYENEKFSSKTEWRNRAISSISLPLRTKNIYVNSDNISET 2124
Query: 992 -GYTYILPKNVLKKFVTISDLRAQIAGYLY 1020
YTYILP+N+L+KFVTISDLR Q+AGY+Y
Sbjct: 2125 FPYTYILPQNLLRKFVTISDLRTQVAGYMY 2154
Score = 384 (140.2 bits), Expect = 1.5e-242, Sum P(5) = 1.5e-242
Identities = 67/86 (77%), Positives = 73/86 (84%)
Query: 220 RHTLAYDKGWRIRTEFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILE 279
RHTLAYDKGWR+RTEFKQYQ+LK NPFWWT QRHDGKLW LNNYR D+IQALGGVEGILE
Sbjct: 1451 RHTLAYDKGWRVRTEFKQYQLLKNNPFWWTSQRHDGKLWQLNNYRVDVIQALGGVEGILE 1510
Query: 280 HTLFKGTYFPTWEGLFCAYGNWFPGS 305
HT+FK T FP+WEGLF + F S
Sbjct: 1511 HTMFKATGFPSWEGLFWEKASGFEES 1536
Score = 320 (117.7 bits), Expect = 4.3e-124, Sum P(5) = 4.3e-124
Identities = 63/77 (81%), Positives = 68/77 (88%)
Query: 1043 SDHQTFIFHSQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHT 1102
S + +F +QI FVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLK+IHT
Sbjct: 1789 SSNYAELFSNQIQLFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKVIHT 1848
Query: 1103 SVWAGQKRLGQLGE-KT 1118
SVWAGQKRLGQL + KT
Sbjct: 1849 SVWAGQKRLGQLAKWKT 1865
Score = 277 (102.6 bits), Expect = 1.5e-242, Sum P(5) = 1.5e-242
Identities = 53/116 (45%), Positives = 70/116 (60%)
Query: 1117 KTVVITCSFTPGSCSLTAYKLTPSGFEWGRQNTDKGNNPK-GYLPSHYERVQMLLSDRFL 1175
K V +T S+ PGS SL AY ++ G EWG +N D ++ GY PS E+ Q+LLSDR
Sbjct: 2237 KAVTLTVSYIPGSISLAAYTVSKEGIEWGSKNMDINSDEAIGYEPSMAEKCQLLLSDRIQ 2296
Query: 1176 GFFMVPAQSSWNYNFMGVRHDPNMKYDLQLANPKEFYHEIHRPAHFLNFSSLEDGD 1231
GFF+VP + WNYNF G P M Y L+L P F+ HRP H ++++ LE D
Sbjct: 2297 GFFLVPEEGVWNYNFNGASFSPKMTYSLKLDVPLPFFALEHRPTHVISYTELETND 2352
Score = 269 (99.8 bits), Expect = 1.5e-242, Sum P(5) = 1.5e-242
Identities = 49/84 (58%), Positives = 62/84 (73%)
Query: 139 YQDMNHTNSYGIIRGLQFASFIVQYYXXXXXXXXXXXQRASEMAGPPQMPNDFLTFQDTA 198
Y+DM+HTNSYG++RGLQF+SFI Q+Y QRA+E+AGP PNDFL F+D A
Sbjct: 1042 YKDMSHTNSYGLVRGLQFSSFIWQFYGLVLDLLILGLQRATEIAGPADAPNDFLHFKDQA 1101
Query: 199 TELAHPIRLYCRYVDKVHLFLRHT 222
TE +HPIRLY RY+DKV++ R T
Sbjct: 1102 TETSHPIRLYTRYIDKVYIMFRFT 1125
Score = 254 (94.5 bits), Expect = 5.9e-119, Sum P(5) = 5.9e-119
Identities = 50/67 (74%), Positives = 57/67 (85%)
Query: 737 IVNKWNTALIGLMTYFRESVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPAVF-- 794
I NKWNTALI LMTY+RE+ ++T ELLDLLVKCE+KIQTR+KI LNSKMPSRFPPAVF
Sbjct: 1283 IANKWNTALIALMTYYREAAISTPELLDLLVKCESKIQTRVKISLNSKMPSRFPPAVFYS 1342
Query: 795 DQELDAL 801
+EL L
Sbjct: 1343 PKELGGL 1349
Score = 241 (89.9 bits), Expect = 1.5e-132, Sum P(5) = 1.5e-132
Identities = 45/54 (83%), Positives = 51/54 (94%)
Query: 793 VFDQELDALEIETVQKETIHPRKSYKMNSSCADVLLFAAYKWNVSRPSLLADSK 846
V DQEL++L+IETVQKETIHPRKSYKMNSSCAD+LL AAYKWNVSRPSLL D++
Sbjct: 1620 VLDQELESLQIETVQKETIHPRKSYKMNSSCADILLLAAYKWNVSRPSLLNDNR 1673
Score = 150 (57.9 bits), Expect = 3.6e-119, Sum P(4) = 3.6e-119
Identities = 25/42 (59%), Positives = 35/42 (83%)
Query: 1233 VILKPDKSTITEPHHIWPSLSDDEWIKVEVQLKDLILADYGK 1274
+IL+PDKS IT+ +H+WP+L D +W+ VE +L+DLILADY K
Sbjct: 1976 LILRPDKSIITKENHVWPNLDDQQWLDVEPKLRDLILADYAK 2017
Score = 148 (57.2 bits), Expect = 8.0e-29, Sum P(2) = 8.0e-29
Identities = 45/107 (42%), Positives = 67/107 (62%)
Query: 1 MVLFNLYDDWLKTISSYTAFSRLILILRALHSDLRWSKQTDVGITHFRSGMSHDEDQLIP 60
MVLFNLYDDWL+++SSYTAFSRLILILRAL+ + +++T + + +S ++ E+ + P
Sbjct: 1938 MVLFNLYDDWLQSVSSYTAFSRLILILRALNVN---TEKTKLILRPDKSIITK-ENHVWP 1993
Query: 61 NLYRYIQPW---ESEFIDSQRVWAEYALKRQEANAQNRRLTLEDLED 104
NL Q W E + D + A+YA K+ N + LT ++ D
Sbjct: 1994 NLDD--QQWLDVEPKLRDL--ILADYA-KKNNINVAS--LTNSEVRD 2033
Score = 143 (55.4 bits), Expect = 1.8e-77, Sum P(5) = 1.8e-77
Identities = 46/138 (33%), Positives = 61/138 (44%)
Query: 840 SLLADSKGKFPPVVFYTPKELGGLGMLSMGHVLIPQ--VRELFKYNWGFIY------TVS 891
SL + +FPP VFY+PKELGGLGMLSMGHVLIPQ +R + + G + T
Sbjct: 1326 SLNSKMPSRFPPAVFYSPKELGGLGMLSMGHVLIPQSDLRWSKQTDTGITHFRSGMTTNG 1385
Query: 892 LDFYDNMSHYVNSMEISAPSAQRQQIAEIEKQTKEQSQLTATTTRTVNKHGDEIIT--ST 949
N+ Y+ E +QR K+ + Q T + D I +T
Sbjct: 1386 EHLIPNLYRYIQPWESEFIDSQRVWAEYAMKRQEALQQNRRLTLEDLEDSWDRGIPRINT 1445
Query: 950 TSNYETATFGSKTEWRVR 967
+ T WRVR
Sbjct: 1446 LFQKDRHTLAYDKGWRVR 1463
Score = 86 (35.3 bits), Expect = 1.9e-222, Sum P(5) = 1.9e-222
Identities = 16/45 (35%), Positives = 25/45 (55%)
Query: 691 NASWDGVRHDPNMKYDLQLANPKEFYHEIHRPAHFLNFSSLEDGD 735
N +++G P M Y L+L P F+ HRP H ++++ LE D
Sbjct: 2308 NYNFNGASFSPKMTYSLKLDVPLPFFALEHRPTHVISYTELETND 2352
Score = 38 (18.4 bits), Expect = 2.0e-96, Sum P(5) = 2.0e-96
Identities = 10/33 (30%), Positives = 13/33 (39%)
Query: 539 GDEIITSTTSNYETATFGSKTEWRVRAISATNL 571
G T + + TA T +R AIS L
Sbjct: 1276 GSTTFTKIANKWNTALIALMTYYREAAISTPEL 1308
Score = 38 (18.4 bits), Expect = 8.9e-68, Sum P(4) = 8.9e-68
Identities = 10/33 (30%), Positives = 13/33 (39%)
Query: 942 GDEIITSTTSNYETATFGSKTEWRVRAISATNL 974
G T + + TA T +R AIS L
Sbjct: 1276 GSTTFTKIANKWNTALIALMTYYREAAISTPEL 1308
Score = 37 (18.1 bits), Expect = 3.1e-111, Sum P(5) = 3.1e-111
Identities = 13/46 (28%), Positives = 19/46 (41%)
Query: 671 NELPQLSPQDVTSHAKIMADNASWDGVRHDPNMKYDLQLANPKEFY 716
N +P + P S KIM N + +R L + P+E Y
Sbjct: 1741 NWIPGMKPLIQQSMNKIMKANPALYVLRERIRKGLQLYASEPQEQY 1786
>UNIPROTKB|G4N5D4 [details] [associations]
symbol:MGG_05244 "Pre-mRNA-processing-splicing factor 8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR000555
InterPro:IPR012591 InterPro:IPR012592 Pfam:PF08082 Pfam:PF08083
ProDom:PD149576 SMART:SM00232 EMBL:CM001233 GO:GO:0005681
GO:GO:0000398 KO:K12856 InterPro:IPR012984 InterPro:IPR021983
InterPro:IPR019581 InterPro:IPR019580 InterPro:IPR019582
Pfam:PF08084 Pfam:PF12134 Pfam:PF10598 Pfam:PF10597 Pfam:PF10596
RefSeq:XP_003712798.1 ProteinModelPortal:G4N5D4 SMR:G4N5D4
EnsemblFungi:MGG_05244T0 GeneID:2675312 KEGG:mgr:MGG_05244
Uniprot:G4N5D4
Length = 2373
Score = 944 (337.4 bits), Expect = 3.3e-233, Sum P(5) = 3.3e-233
Identities = 182/276 (65%), Positives = 217/276 (78%)
Query: 420 AFSRLILILRALHVNTERTKVILKPDKSTITEPHHIWPSLSDDEWIKVEVQLKDLILADY 479
AFSRL+LILRALHVN ++TK+IL+PDK+ IT+ HHIWPS +D+EWIKVE QL+DLIL DY
Sbjct: 1967 AFSRLVLILRALHVNQDKTKLILRPDKTVITQDHHIWPSFTDEEWIKVETQLRDLILNDY 2026
Query: 480 GKKNNVNVASLTQSEIRDIILGMEISAPSAQRQQIAEIEKQTKEQSQLTATTTRTVNKHG 539
GKKNNVNV+SLT SE+RDIILGMEIS+PS QRQQ AEIEKQ +EQ QLTA TT+T N HG
Sbjct: 2027 GKKNNVNVSSLTSSEVRDIILGMEISSPSMQRQQAAEIEKQQQEQQQLTAVTTKTQNVHG 2086
Query: 540 DEIITSTTSNYETATFGSKTEWRVRAISATNLHLRTNHIYVSSDDIKETGYTYILPKNVL 599
+EII +TTS +E TF SKTEWR RAI+++NL R N+IYVSS D TY++P N+L
Sbjct: 2087 EEIIVTTTSQFEQQTFASKTEWRTRAIASSNLRTRANNIYVSSTDGSLDDITYVMPNNIL 2146
Query: 600 KKFVTISDLRAQIAGYLYGVSPADNPQVKEIRCIVMPPQWGTHQTVHLPASLPGHPYLKE 659
KKF+ I+DLR Q+AGYLYG SPADN QVKEI+CIV+ PQ G + V LP +LP H LK
Sbjct: 2147 KKFIQIADLRVQVAGYLYGSSPADNSQVKEIKCIVLVPQIGGLRNVQLPQNLPVHDTLKS 2206
Query: 660 MEPLGWIHTQP-NELPQLSPQDVTSHAKIMADNASW 694
MEPLG IHT NELP +S DVT HAK+ + W
Sbjct: 2207 MEPLGVIHTMSGNELPYMSAVDVTEHAKLRDAHPEW 2242
Score = 551 (199.0 bits), Expect = 3.3e-233, Sum P(5) = 3.3e-233
Identities = 110/153 (71%), Positives = 126/153 (82%)
Query: 294 LFCAYGNWFPGSKPLIQQALAKIMKANPALYVLRERIRKALQLYSSEPTEPYLSSQNYGE 353
LF YG +FPG K LIQQA+AKIMK+NPALYVLRERIRK LQLY+SE + +L+SQNY E
Sbjct: 1746 LFGGYGQYFPGLKVLIQQAMAKIMKSNPALYVLRERIRKGLQLYASESNQEFLNSQNYSE 1805
Query: 354 LFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQ 413
LFSNQ F+DDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQ
Sbjct: 1806 LFSNQTQLFIDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQ 1865
Query: 414 KRLGQLA----FSRLILILRALHVNTERTKVIL 442
KRLGQLA + ++R+L V + ++I+
Sbjct: 1866 KRLGQLAKWKTAEEVAALIRSLPVEEQPKQLIV 1898
Score = 455 (165.2 bits), Expect = 3.4e-220, Sum P(4) = 3.4e-220
Identities = 83/113 (73%), Positives = 98/113 (86%)
Query: 32 SDLRWSKQTDVGITHFRSGMSHDEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAN 91
SD R SKQTD GI+HFR+GM+HDE+ LIP++YRY+ WESEFIDSQRVW EY+ KR EAN
Sbjct: 1373 SDKRLSKQTDTGISHFRAGMTHDEETLIPSIYRYVTSWESEFIDSQRVWTEYSQKRLEAN 1432
Query: 92 AQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRIRTEFKQYQDMNH 144
QNRRLTLEDLEDSWDRG+PRI TLFQKDR TL++DKG+R+R+EFK YQ M +
Sbjct: 1433 QQNRRLTLEDLEDSWDRGLPRIATLFQKDRSTLSFDKGFRVRSEFKIYQLMRN 1485
Score = 389 (142.0 bits), Expect = 1.5e-160, Sum P(5) = 1.5e-160
Identities = 79/148 (53%), Positives = 104/148 (70%)
Query: 875 QVRELFKYNWGFIYTVSLDFYDN--MSHYVNSMEISAPSAQRQQIAEIEKQTKEQSQLTA 932
Q+R+L ++G V++ + + + MEIS+PS QRQQ AEIEKQ +EQ QLTA
Sbjct: 2017 QLRDLILNDYGKKNNVNVSSLTSSEVRDIILGMEISSPSMQRQQAAEIEKQQQEQQQLTA 2076
Query: 933 TTTRTVNKHGDEIITSTTSNYETATFGSKTEWRVRAISATNLHLRTNHIYVSSDDIKETG 992
TT+T N HG+EII +TTS +E TF SKTEWR RAI+++NL R N+IYVSS D
Sbjct: 2077 VTTKTQNVHGEEIIVTTTSQFEQQTFASKTEWRTRAIASSNLRTRANNIYVSSTDGSLDD 2136
Query: 993 YTYILPKNVLKKFVTISDLRAQIAGYLY 1020
TY++P N+LKKF+ I+DLR Q+AGYLY
Sbjct: 2137 ITYVMPNNILKKFIQIADLRVQVAGYLY 2164
Score = 327 (120.2 bits), Expect = 3.3e-233, Sum P(5) = 3.3e-233
Identities = 58/86 (67%), Positives = 70/86 (81%)
Query: 220 RHTLAYDKGWRIRTEFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILE 279
R TL++DKG+R+R+EFK YQ+++ NPFWWT QRHDGKLW LN+YRTD+IQALGGVE ILE
Sbjct: 1462 RSTLSFDKGFRVRSEFKIYQLMRNNPFWWTSQRHDGKLWQLNSYRTDVIQALGGVETILE 1521
Query: 280 HTLFKGTYFPTWEGLFCAYGNWFPGS 305
HTLFK T F +WEGLF + F S
Sbjct: 1522 HTLFKATGFSSWEGLFWEKASGFEES 1547
Score = 318 (117.0 bits), Expect = 7.9e-118, Sum P(5) = 7.9e-118
Identities = 63/88 (71%), Positives = 72/88 (81%)
Query: 1032 SSDHTQDIRRQSDHQTFIFHSQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPR 1091
+S+ Q+ ++ +F +Q F+DDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPR
Sbjct: 1790 ASESNQEFLNSQNYSE-LFSNQTQLFIDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPR 1848
Query: 1092 TGQLFLKIIHTSVWAGQKRLGQLGE-KT 1118
TGQLFLKIIHTSVWAGQKRLGQL + KT
Sbjct: 1849 TGQLFLKIIHTSVWAGQKRLGQLAKWKT 1876
Score = 286 (105.7 bits), Expect = 3.3e-233, Sum P(5) = 3.3e-233
Identities = 53/118 (44%), Positives = 77/118 (65%)
Query: 1115 GEKTVVITCSFTPGSCSLTAYKLTPSGFEWGRQNTD-KGNNPKGYLPSHYERVQMLLSDR 1173
G +T+ +T SFTPGS SL+A+ LTP G++WG N D + + P+G+ + E+ ++LLS R
Sbjct: 2246 GRETLTVTVSFTPGSVSLSAWALTPQGYKWGVDNKDIQSDQPQGFTTTMGEKRKLLLSPR 2305
Query: 1174 FLGFFMVPAQSSWNYNFMGVRHDPNMK--YDLQLANPKEFYHEIHRPAHFLNFSSLED 1229
+ GFF+VP WNY+FMG +K ++L P FY ++HRP HF NF+ LED
Sbjct: 2306 YKGFFLVPDNGKWNYSFMGSAFSGMLKKPVPVKLDTPAPFYSDVHRPLHFQNFAELED 2363
Score = 276 (102.2 bits), Expect = 3.3e-233, Sum P(5) = 3.3e-233
Identities = 51/84 (60%), Positives = 61/84 (72%)
Query: 139 YQDMNHTNSYGIIRGLQFASFIVQYYXXXXXXXXXXXQRASEMAGPPQMPNDFLTFQDTA 198
Y+DMNH NSYG+IRGLQF++F+ QYY QRASE+AGPPQ PNDFL F+D
Sbjct: 1054 YKDMNHVNSYGMIRGLQFSAFVFQYYGLILDLLLLGPQRASEIAGPPQSPNDFLQFKDRE 1113
Query: 199 TELAHPIRLYCRYVDKVHLFLRHT 222
TE HPIRLY RY+DK+ + LR T
Sbjct: 1114 TETKHPIRLYSRYIDKIWVCLRFT 1137
Score = 244 (91.0 bits), Expect = 6.7e-117, Sum P(5) = 6.7e-117
Identities = 48/67 (71%), Positives = 55/67 (82%)
Query: 737 IVNKWNTALIGLMTYFRESVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPAVF-- 794
I NKWNTALI L TY+RE+ V+T +LLD +VKCE KIQTR+KIGLNSKMPSRFPPAVF
Sbjct: 1294 IANKWNTALIALFTYYREAAVSTVDLLDTIVKCETKIQTRVKIGLNSKMPSRFPPAVFYT 1353
Query: 795 DQELDAL 801
+EL L
Sbjct: 1354 PKELGGL 1360
Score = 227 (85.0 bits), Expect = 1.4e-125, Sum P(5) = 1.4e-125
Identities = 42/54 (77%), Positives = 49/54 (90%)
Query: 793 VFDQELDALEIETVQKETIHPRKSYKMNSSCADVLLFAAYKWNVSRPSLLADSK 846
VFDQEL++L IET QKETIHPRKSYKMNSSCAD+ LFA +KWNV+RPS+L D+K
Sbjct: 1631 VFDQELESLGIETCQKETIHPRKSYKMNSSCADIQLFATHKWNVTRPSMLFDTK 1684
Score = 179 (68.1 bits), Expect = 9.7e-114, Sum P(4) = 9.7e-114
Identities = 31/47 (65%), Positives = 39/47 (82%)
Query: 1228 EDGDGVILKPDKSTITEPHHIWPSLSDDEWIKVEVQLKDLILADYGK 1274
+D +IL+PDK+ IT+ HHIWPS +D+EWIKVE QL+DLIL DYGK
Sbjct: 1982 QDKTKLILRPDKTVITQDHHIWPSFTDEEWIKVETQLRDLILNDYGK 2028
Score = 152 (58.6 bits), Expect = 5.6e-133, Sum P(3) = 5.6e-133
Identities = 29/31 (93%), Positives = 31/31 (100%)
Query: 1 MVLFNLYDDWLKTISSYTAFSRLILILRALH 31
MVLFNLYDDWLK+ISSYTAFSRL+LILRALH
Sbjct: 1949 MVLFNLYDDWLKSISSYTAFSRLVLILRALH 1979
Score = 121 (47.7 bits), Expect = 2.2e-84, Sum P(5) = 2.2e-84
Identities = 21/27 (77%), Positives = 24/27 (88%)
Query: 848 KFPPVVFYTPKELGGLGMLSMGHVLIP 874
+FPP VFYTPKELGGLGM+S H+LIP
Sbjct: 1345 RFPPAVFYTPKELGGLGMISGSHILIP 1371
Score = 88 (36.0 bits), Expect = 2.2e-212, Sum P(5) = 2.2e-212
Identities = 19/53 (35%), Positives = 28/53 (52%)
Query: 687 IMADNASWD----GVRHDPNMK--YDLQLANPKEFYHEIHRPAHFLNFSSLED 733
++ DN W+ G +K ++L P FY ++HRP HF NF+ LED
Sbjct: 2311 LVPDNGKWNYSFMGSAFSGMLKKPVPVKLDTPAPFYSDVHRPLHFQNFAELED 2363
Score = 43 (20.2 bits), Expect = 5.2e-45, Sum P(4) = 5.2e-45
Identities = 14/44 (31%), Positives = 20/44 (45%)
Query: 890 VSLDFYDNMSHYV-NSMEISAP-SAQRQQIAEIEKQTKEQSQLT 931
V + + + YV N + P S Q+Q + KQTK Q T
Sbjct: 478 VRVSYQKLLKTYVLNELHTKKPKSLQKQNLLSTLKQTKFFQQTT 521
Score = 40 (19.1 bits), Expect = 2.5e-207, Sum P(5) = 2.5e-207
Identities = 15/56 (26%), Positives = 23/56 (41%)
Query: 832 YKWNVSRPSLLADSKGKFPPVVFYTPKELGGLGMLSMGHVLIPQVRELFKYNWGFI 887
YKW V + +D F + K L L G L+P + K+N+ F+
Sbjct: 2273 YKWGVDNKDIQSDQPQGFTTTMGEKRKLL--LSPRYKGFFLVP---DNGKWNYSFM 2323
Score = 39 (18.8 bits), Expect = 3.5e-92, Sum P(5) = 3.5e-92
Identities = 15/49 (30%), Positives = 21/49 (42%)
Query: 482 KNNVNVASLTQSEIRDIILG-MEISAP-SAQRQQIAEIEKQTKEQSQLT 528
K V V Q ++ +L + P S Q+Q + KQTK Q T
Sbjct: 473 KQPVKVRVSYQKLLKTYVLNELHTKKPKSLQKQNLLSTLKQTKFFQQTT 521
Score = 38 (18.4 bits), Expect = 2.1e-95, Sum P(5) = 2.1e-95
Identities = 13/52 (25%), Positives = 20/52 (38%)
Query: 521 TKEQSQLTATTTRTV-NKHGDEIITSTTSNYETATFGSKTEWRVRAISATNL 571
T+E Q R + G T + + TA T +R A+S +L
Sbjct: 1268 TEEDIQKFNNRIRQILMSSGSTTFTKIANKWNTALIALFTYYREAAVSTVDL 1319
Score = 38 (18.4 bits), Expect = 3.2e-69, Sum P(4) = 3.2e-69
Identities = 13/52 (25%), Positives = 20/52 (38%)
Query: 924 TKEQSQLTATTTRTV-NKHGDEIITSTTSNYETATFGSKTEWRVRAISATNL 974
T+E Q R + G T + + TA T +R A+S +L
Sbjct: 1268 TEEDIQKFNNRIRQILMSSGSTTFTKIANKWNTALIALFTYYREAAVSTVDL 1319
>ASPGD|ASPL0000077099 [details] [associations]
symbol:prp8 species:162425 "Emericella nidulans"
[GO:0016539 "intein-mediated protein splicing" evidence=IDA]
[GO:0000393 "spliceosomal conformational changes to generate
catalytic conformation" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=IEA] InterPro:IPR000555 InterPro:IPR004042
InterPro:IPR007868 InterPro:IPR012591 InterPro:IPR012592
Pfam:PF05203 Pfam:PF08082 Pfam:PF08083 ProDom:PD149576
PROSITE:PS50819 SMART:SM00232 GO:GO:0005681 GO:GO:0004519
EMBL:BN001303 GO:GO:0000398 EMBL:AACD01000078 KO:K12856
InterPro:IPR012984 InterPro:IPR021983 InterPro:IPR019581
InterPro:IPR019582 Pfam:PF08084 Pfam:PF12134 Pfam:PF10598
Pfam:PF10597 OrthoDB:EOG4Q2HPK OMA:WAPHPFN RefSeq:XP_662127.1
ProteinModelPortal:Q5B4K7 SMR:Q5B4K7 STRING:Q5B4K7
EnsemblFungi:CADANIAT00005917 GeneID:2872315 KEGG:ani:AN4523.2
GO:GO:0030908 Uniprot:Q5B4K7
Length = 2945
Score = 966 (345.1 bits), Expect = 1.9e-228, Sum P(5) = 1.9e-228
Identities = 185/277 (66%), Positives = 221/277 (79%)
Query: 420 AFSRLILILRALHVNTERTKVILKPDKSTITEPHHIWPSLSDDEWIKVEVQLKDLILADY 479
AFSRLILILRALHVN ++ K+IL+PDKS IT HHIWPSLSD++W+KVEVQL+DLIL DY
Sbjct: 2542 AFSRLILILRALHVNIDKAKIILRPDKSVITLEHHIWPSLSDEDWMKVEVQLRDLILNDY 2601
Query: 480 GKKNNVNVASLTQSEIRDIILGMEISAPSAQRQQIAEIEKQTKEQSQLTATTTRTVNKHG 539
GKKNNVNV SLT SE+RDIILGMEISAPS QRQQ AEIEKQ +E QLTA TT+T N G
Sbjct: 2602 GKKNNVNVQSLTSSEVRDIILGMEISAPSLQRQQAAEIEKQQEEAKQLTAVTTKTQNVRG 2661
Query: 540 DEIITSTTSNYETATFGSKTEWRVRAISATNLHLRTNHIYVSSDDIKETGYTYILPKNVL 599
++II +TTS YE +F SKTEWR RAI+ +NL R N+IYVSSDDI++ GYTYI+PKN+L
Sbjct: 2662 EDIIVTTTSQYEQQSFASKTEWRTRAIATSNLRTRANNIYVSSDDIRDEGYTYIMPKNIL 2721
Query: 600 KKFVTISDLRAQIAGYLYGVSPADNPQVKEIRCIVMPPQWGTHQTVHLPASLPGHPYLKE 659
K+F+ I+DLR Q+AG+LYG SP DN QVKEIR IVM PQ G + V LP LP H YL
Sbjct: 2722 KRFIMIADLRVQVAGFLYGSSPPDNDQVKEIRTIVMVPQVGNTREVQLPQQLPQHDYLNS 2781
Query: 660 MEPLGWIHT-QPNELPQLSPQDVTSHAKIMADNASWD 695
+EPLG IHT NE P ++ QDVT H+++M ++SWD
Sbjct: 2782 LEPLGVIHTISGNEPPYMTAQDVTQHSRLMNAHSSWD 2818
Score = 558 (201.5 bits), Expect = 1.9e-228, Sum P(5) = 1.9e-228
Identities = 117/174 (67%), Positives = 137/174 (78%)
Query: 294 LFCAYGNWFPGSKPLIQQALAKIMKANPALYVLRERIRKALQLYSSEPTEPYLSSQNYGE 353
L+ AYG +FPG K LIQQA+AKIMKANPALYVLRERIRK LQLY+SE + +L+SQNY E
Sbjct: 2321 LYSAYGQYFPGLKTLIQQAMAKIMKANPALYVLRERIRKGLQLYASESNQEFLNSQNYSE 2380
Query: 354 LFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQ 413
LFS QI F+DDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQ
Sbjct: 2381 LFSPQIQLFIDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQ 2440
Query: 414 KRLGQLA----FSRLILILRALHVNTERTKVILKPDKSTIT--EPHHI-WPSLS 460
KRLGQLA + ++R+L V E+ K ++ K + E H + +P++S
Sbjct: 2441 KRLGQLAKWKTAEEVAALIRSLPVE-EQPKQLIVTRKGLLDPLEVHLLDFPNIS 2493
Score = 488 (176.8 bits), Expect = 2.1e-227, Sum P(5) = 2.1e-227
Identities = 88/111 (79%), Positives = 99/111 (89%)
Query: 32 SDLRWSKQTDVGITHFRSGMSHDEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAN 91
SD RWSKQTD GITHFR+GMSHDE+ LIPN++RYI PWE+EFIDSQRVW EY+ KR EA
Sbjct: 1357 SDKRWSKQTDTGITHFRAGMSHDEETLIPNIFRYIIPWEAEFIDSQRVWMEYSQKRMEAQ 1416
Query: 92 AQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRIRTEFKQYQDM 142
QNRRLTLEDLEDSWDRG+PRINTLFQKDR TL++DKG+R+R EFKQYQ M
Sbjct: 1417 QQNRRLTLEDLEDSWDRGLPRINTLFQKDRSTLSFDKGFRLRAEFKQYQLM 1467
Score = 410 (149.4 bits), Expect = 5.8e-156, Sum P(5) = 5.8e-156
Identities = 81/148 (54%), Positives = 108/148 (72%)
Query: 875 QVRELFKYNWGFIYTVSLDFYDN--MSHYVNSMEISAPSAQRQQIAEIEKQTKEQSQLTA 932
Q+R+L ++G V++ + + + MEISAPS QRQQ AEIEKQ +E QLTA
Sbjct: 2592 QLRDLILNDYGKKNNVNVQSLTSSEVRDIILGMEISAPSLQRQQAAEIEKQQEEAKQLTA 2651
Query: 933 TTTRTVNKHGDEIITSTTSNYETATFGSKTEWRVRAISATNLHLRTNHIYVSSDDIKETG 992
TT+T N G++II +TTS YE +F SKTEWR RAI+ +NL R N+IYVSSDDI++ G
Sbjct: 2652 VTTKTQNVRGEDIIVTTTSQYEQQSFASKTEWRTRAIATSNLRTRANNIYVSSDDIRDEG 2711
Query: 993 YTYILPKNVLKKFVTISDLRAQIAGYLY 1020
YTYI+PKN+LK+F+ I+DLR Q+AG+LY
Sbjct: 2712 YTYIMPKNILKRFIMIADLRVQVAGFLY 2739
Score = 321 (118.1 bits), Expect = 3.8e-110, Sum P(6) = 3.8e-110
Identities = 64/88 (72%), Positives = 72/88 (81%)
Query: 1032 SSDHTQDIRRQSDHQTFIFHSQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPR 1091
+S+ Q+ ++ +F QI F+DDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPR
Sbjct: 2365 ASESNQEFLNSQNYSE-LFSPQIQLFIDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPR 2423
Query: 1092 TGQLFLKIIHTSVWAGQKRLGQLGE-KT 1118
TGQLFLKIIHTSVWAGQKRLGQL + KT
Sbjct: 2424 TGQLFLKIIHTSVWAGQKRLGQLAKWKT 2451
Score = 287 (106.1 bits), Expect = 1.9e-228, Sum P(5) = 1.9e-228
Identities = 52/82 (63%), Positives = 61/82 (74%)
Query: 139 YQDMNHTNSYGIIRGLQFASFIVQYYXXXXXXXXXXXQRASEMAGPPQMPNDFLTFQDTA 198
Y+DMNHTNSYG+IRGLQF+ F+ Q+Y QRASEMAGPPQ PNDFL F+D A
Sbjct: 1038 YKDMNHTNSYGLIRGLQFSGFVFQFYGLMIDLLLLGLQRASEMAGPPQSPNDFLQFRDRA 1097
Query: 199 TELAHPIRLYCRYVDKVHLFLR 220
TE HPIRLY RY+DK+ +F R
Sbjct: 1098 TETRHPIRLYTRYIDKIWVFFR 1119
Score = 281 (104.0 bits), Expect = 1.9e-228, Sum P(5) = 1.9e-228
Identities = 54/117 (46%), Positives = 76/117 (64%)
Query: 1116 EKTVVITCSFTPGSCSLTAYKLTPSGFEWGRQNTDK-GNNPKGYLPSHYERVQMLLSDRF 1174
+KTV +T SFTPGS SL A+ LTP G++WG +N D + P+G+ S E+ Q+LLSD+
Sbjct: 2819 KKTVTMTVSFTPGSVSLAAWGLTPQGYKWGAENRDTTSDQPQGFSTSMGEKCQLLLSDKI 2878
Query: 1175 LGFFMVPAQSSWNYNFMGVRHDPNMKYDL--QLANPKEFYHEIHRPAHFLNFSSLED 1229
G+F+VP + WNY+FMG + K + ++ P FY + HRP HF NF+ LED
Sbjct: 2879 RGYFLVPEDNVWNYSFMGSSYGSVEKRPVYVKIDTPLRFYDDQHRPLHFQNFAELED 2935
Score = 255 (94.8 bits), Expect = 1.9e-228, Sum P(5) = 1.9e-228
Identities = 48/76 (63%), Positives = 56/76 (73%)
Query: 220 RHTLAYDKGWRIRTEFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILE 279
R TL++DKG+R+R EFKQYQ++K NPFWWT QRHDGKLWNLN YRTD+IQALG
Sbjct: 1446 RSTLSFDKGFRLRAEFKQYQLMKSNPFWWTSQRHDGKLWNLNAYRTDVIQALGA------ 1499
Query: 280 HTLFKGTYFPTWEGLF 295
FP+WEGLF
Sbjct: 1500 --------FPSWEGLF 1507
Score = 242 (90.2 bits), Expect = 1.1e-119, Sum P(5) = 1.1e-119
Identities = 48/67 (71%), Positives = 54/67 (80%)
Query: 737 IVNKWNTALIGLMTYFRESVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPAVF-- 794
I NKWNTALI L TY+RE+ V+T LLD +VKCE KIQTR+KIGLNSKMPSRFPPAVF
Sbjct: 1278 IANKWNTALIALFTYYREAAVSTVNLLDTIVKCETKIQTRVKIGLNSKMPSRFPPAVFYT 1337
Query: 795 DQELDAL 801
+EL L
Sbjct: 1338 PKELGGL 1344
Score = 233 (87.1 bits), Expect = 6.3e-120, Sum P(6) = 6.3e-120
Identities = 44/59 (74%), Positives = 50/59 (84%)
Query: 793 VFDQELDALEIETVQKETIHPRKSYKMNSSCADVLLFAAYKWNVSRPSLLADSKGKFPP 851
VFDQEL+ L IE VQKETIHPRKSYKMNSSCAD+LLFA KWNV+RPS+L D+K + P
Sbjct: 2206 VFDQELEQLGIEAVQKETIHPRKSYKMNSSCADILLFATNKWNVTRPSILFDTKDVYEP 2264
Score = 181 (68.8 bits), Expect = 8.2e-108, Sum P(4) = 8.2e-108
Identities = 32/42 (76%), Positives = 38/42 (90%)
Query: 1233 VILKPDKSTITEPHHIWPSLSDDEWIKVEVQLKDLILADYGK 1274
+IL+PDKS IT HHIWPSLSD++W+KVEVQL+DLIL DYGK
Sbjct: 2562 IILRPDKSVITLEHHIWPSLSDEDWMKVEVQLRDLILNDYGK 2603
Score = 150 (57.9 bits), Expect = 4.9e-134, Sum P(3) = 4.9e-134
Identities = 30/38 (78%), Positives = 34/38 (89%)
Query: 1 MVLFNLYDDWLKTISSYTAFSRLILILRALHSDLRWSK 38
MVLFNLYD+WLKTIS YTAFSRLILILRALH ++ +K
Sbjct: 2524 MVLFNLYDEWLKTISPYTAFSRLILILRALHVNIDKAK 2561
Score = 121 (47.7 bits), Expect = 1.5e-87, Sum P(5) = 1.5e-87
Identities = 21/27 (77%), Positives = 24/27 (88%)
Query: 848 KFPPVVFYTPKELGGLGMLSMGHVLIP 874
+FPP VFYTPKELGGLGM+S H+LIP
Sbjct: 1329 RFPPAVFYTPKELGGLGMISGSHILIP 1355
Score = 80 (33.2 bits), Expect = 2.6e-207, Sum P(5) = 2.6e-207
Identities = 21/58 (36%), Positives = 30/58 (51%)
Query: 676 LSPQDVTSHAKIMADNASWDGVRHDPNMKYDLQLANPKEFYHEIHRPAHFLNFSSLED 733
L P+D + M +S+ V P Y +++ P FY + HRP HF NF+ LED
Sbjct: 2883 LVPEDNVWNYSFMG--SSYGSVEKRP--VY-VKIDTPLRFYDDQHRPLHFQNFAELED 2935
Score = 46 (21.3 bits), Expect = 3.3e-99, Sum P(5) = 3.3e-99
Identities = 25/117 (21%), Positives = 51/117 (43%)
Query: 469 VQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSAQRQQI-AEIEKQTKEQS-- 525
++ D + Y K N + S++ E+R + ++ + + + + ++ TKE++
Sbjct: 1187 IEWDDTFASVYSKDNPNLLFSMSGFEVRILPKCRNLNEEFSVKDSVWSLVDNSTKERTAH 1246
Query: 526 ---QLTATTTRTVNKHGDEIITS---TT-----SNYETATFGSKTEWRVRAISATNL 571
Q+T + N +I+ S TT + + TA T +R A+S NL
Sbjct: 1247 AFLQVTEEDIQKFNNRIRQILMSSGSTTFTKIANKWNTALIALFTYYREAAVSTVNL 1303
Score = 44 (20.5 bits), Expect = 2.1e-227, Sum P(5) = 2.1e-227
Identities = 16/50 (32%), Positives = 23/50 (46%)
Query: 212 VDKVHLFLRH--TLAYDKGWRIRTEFK-----QYQVLKQNP-----FWWT 249
VDK L+LRH + ++ G+ +FK Q L Q P WW+
Sbjct: 2100 VDKDQLYLRHDYVVLHNSGFEESMKFKKLTNAQRSGLNQIPNRRFTLWWS 2149
Score = 43 (20.2 bits), Expect = 3.0e-70, Sum P(4) = 3.0e-70
Identities = 14/52 (26%), Positives = 20/52 (38%)
Query: 924 TKEQSQLTATTTRTV-NKHGDEIITSTTSNYETATFGSKTEWRVRAISATNL 974
T+E Q R + G T + + TA T +R A+S NL
Sbjct: 1252 TEEDIQKFNNRIRQILMSSGSTTFTKIANKWNTALIALFTYYREAAVSTVNL 1303
Score = 41 (19.5 bits), Expect = 5.3e-94, Sum P(5) = 5.3e-94
Identities = 8/27 (29%), Positives = 11/27 (40%)
Query: 636 PPQWGTHQTVHLPASLPGHPYLKEMEP 662
PP WG +P + P Y +P
Sbjct: 9 PPGWGASAPPSMPLAPPPPGYQPPADP 35
Score = 39 (18.8 bits), Expect = 7.6e-171, Sum P(4) = 7.6e-171
Identities = 28/128 (21%), Positives = 53/128 (41%)
Query: 315 KIMKANPALYVLRERIRKA--LQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYR-- 370
++MK+NP + + K L Y ++ + + ++ LF + + T + R
Sbjct: 1465 QLMKSNPFWWTSQRHDGKLWNLNAYRTDVIQALGAFPSWEGLFWEKAC-LANGTQLLRYD 1523
Query: 371 ---VTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAFSRLILI 427
V + EG+L P G FN +G+ L I G K + + ++++
Sbjct: 1524 GTKVNVEDVKEGDLLLGPDGGPRRAFNVVSGKDRLYRIKID---GDKEDLVVTANHILVL 1580
Query: 428 LRALHVNT 435
RA +NT
Sbjct: 1581 HRAKAMNT 1588
Score = 39 (18.8 bits), Expect = 6.3e-120, Sum P(6) = 6.3e-120
Identities = 7/30 (23%), Positives = 16/30 (53%)
Query: 559 TEWRVRAISATNLHLRTNHIYVSSDDIKET 588
TEW + L+LR +++ + + +E+
Sbjct: 2093 TEWAGFRVDKDQLYLRHDYVVLHNSGFEES 2122
Score = 39 (18.8 bits), Expect = 4.6e-91, Sum P(5) = 4.6e-91
Identities = 7/30 (23%), Positives = 16/30 (53%)
Query: 962 TEWRVRAISATNLHLRTNHIYVSSDDIKET 991
TEW + L+LR +++ + + +E+
Sbjct: 2093 TEWAGFRVDKDQLYLRHDYVVLHNSGFEES 2122
>CGD|CAL0002209 [details] [associations]
symbol:PRP8 species:5476 "Candida albicans" [GO:0005682 "U5
snRNP" evidence=IEA] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IEA] [GO:0030623 "U5 snRNA binding"
evidence=IEA] [GO:0000244 "assembly of spliceosomal tri-snRNP"
evidence=IEA] [GO:0000389 "mRNA 3'-splice site recognition"
evidence=IEA] InterPro:IPR000555 InterPro:IPR012591
InterPro:IPR012592 Pfam:PF08082 Pfam:PF08083 ProDom:PD149576
SMART:SM00232 CGD:CAL0002209 GO:GO:0005681 EMBL:AACQ01000073
EMBL:AACQ01000072 GO:GO:0000398 InterPro:IPR015425 SUPFAM:SSF101447
eggNOG:COG5178 KO:K12856 InterPro:IPR012984 InterPro:IPR021983
InterPro:IPR019581 InterPro:IPR019580 InterPro:IPR019582
Pfam:PF08084 Pfam:PF12134 Pfam:PF10598 Pfam:PF10597 Pfam:PF10596
RefSeq:XP_716196.1 RefSeq:XP_716279.1 ProteinModelPortal:Q5A322
STRING:Q5A322 GeneID:3642125 GeneID:3642177 KEGG:cal:CaO19.13800
KEGG:cal:CaO19.6442 Uniprot:Q5A322
Length = 2416
Score = 778 (278.9 bits), Expect = 5.1e-196, Sum P(5) = 5.1e-196
Identities = 150/274 (54%), Positives = 199/274 (72%)
Query: 420 AFSRLILILRALHVNTERTKVILKPDKSTITEPHHIWPSLSDDEWIKVEVQLKDLILADY 479
AFSR+ILILRAL+++TE IL+P + +T+ HHIWPSLSD++W+ VE QL+DLIL+DY
Sbjct: 2009 AFSRVILILRALNIDTETANHILRPSANIVTQDHHIWPSLSDEQWVDVEAQLRDLILSDY 2068
Query: 480 GKKNNVNVASLTQSEIRDIILGMEISAPSAQRQQIAEIE--KQTK--EQSQLTATTTRTV 535
KK NVN+ SLTQSE+RD+ILG +I APS +RQ+IAEIE K E +LTA T T
Sbjct: 2069 SKKYNVNIQSLTQSEVRDLILGQDIRAPSVKRQEIAEIEDGKSNNQVENKELTALKTTTT 2128
Query: 536 NKHGDEIITSTTSNYETATFGSKTEWRVRAISATNLHLRTNHIYVSSDDI--KETGYTYI 593
N HG+EI T TT+NYE +TF S+ EWR RAI+A NLHLR +IYVSS++ E +TYI
Sbjct: 2129 NVHGEEITTVTTTNYEQSTFSSRNEWRNRAIAANNLHLRAKNIYVSSEEFVDDENSFTYI 2188
Query: 594 LPKNVLKKFVTISDLRAQIAGYLYGVSPADNPQVKEIRCIVMPPQWGTHQTVHLPASLPG 653
LPKN+L+K + ISDLR Q+ +LYG SPAD+ VKEI+CI + PQ G ++ P +LP
Sbjct: 2189 LPKNILQKLIQISDLRIQVGAFLYGKSPADHVGVKEIKCIAIVPQLGNVNSIQFPNTLPD 2248
Query: 654 HP-YLKEMEPLGWIHTQPNELPQLSPQDVTSHAK 686
YLK++E LGW+HTQ E ++ D+T+ ++
Sbjct: 2249 QVGYLKDLELLGWVHTQSQEFSYMTSFDITTQSR 2282
Score = 518 (187.4 bits), Expect = 5.1e-196, Sum P(5) = 5.1e-196
Identities = 95/127 (74%), Positives = 108/127 (85%)
Query: 294 LFCAYGNWFPGSKPLIQQALAKIMKANPALYVLRERIRKALQLYSSEPTEPYLSSQNYGE 353
++ YGNWFPG KPL+ A+ +IMKANPALYVLRERIRK LQLY S+P E +L+S NY E
Sbjct: 1788 MYDVYGNWFPGLKPLVHNAMREIMKANPALYVLRERIRKGLQLYQSQPQEAFLNSNNYAE 1847
Query: 354 LFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQ 413
LF+N FVDDTNVYRVT+HKTFEGNL TKPING IFI NP++GQLFLKIIHTSVW+GQ
Sbjct: 1848 LFNNDTQLFVDDTNVYRVTVHKTFEGNLATKPINGCIFILNPKSGQLFLKIIHTSVWSGQ 1907
Query: 414 KRLGQLA 420
KRLGQLA
Sbjct: 1908 KRLGQLA 1914
Score = 466 (169.1 bits), Expect = 1.6e-188, Sum P(4) = 1.6e-188
Identities = 80/108 (74%), Positives = 98/108 (90%)
Query: 32 SDLRWSKQTDVGITHFRSGMSHDEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAN 91
SDLRWSKQTD GITHFR+GM+H ++++IP ++RY+ WE+EF+DSQRVWAEYA+KRQEA
Sbjct: 1416 SDLRWSKQTDTGITHFRAGMTHQDEKIIPTIFRYVTSWENEFLDSQRVWAEYAIKRQEAI 1475
Query: 92 AQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRIRTEFKQY 139
QNRRLT ED+E++WDRG+PRI+TLFQKDRHTLAYDKG RIR EFKQ+
Sbjct: 1476 EQNRRLTFEDMENNWDRGLPRISTLFQKDRHTLAYDKGHRIRREFKQF 1523
Score = 334 (122.6 bits), Expect = 7.8e-147, Sum P(5) = 7.8e-147
Identities = 72/154 (46%), Positives = 98/154 (63%)
Query: 875 QVRELFKYNWGFIYTVSLDFY--DNMSHYVNSMEISAPSAQRQQIAEIE--KQTK--EQS 928
Q+R+L ++ Y V++ + + +I APS +RQ+IAEIE K E
Sbjct: 2059 QLRDLILSDYSKKYNVNIQSLTQSEVRDLILGQDIRAPSVKRQEIAEIEDGKSNNQVENK 2118
Query: 929 QLTATTTRTVNKHGDEIITSTTSNYETATFGSKTEWRVRAISATNLHLRTNHIYVSSDDI 988
+LTA T T N HG+EI T TT+NYE +TF S+ EWR RAI+A NLHLR +IYVSS++
Sbjct: 2119 ELTALKTTTTNVHGEEITTVTTTNYEQSTFSSRNEWRNRAIAANNLHLRAKNIYVSSEEF 2178
Query: 989 --KETGYTYILPKNVLKKFVTISDLRAQIAGYLY 1020
E +TYILPKN+L+K + ISDLR Q+ +LY
Sbjct: 2179 VDDENSFTYILPKNILQKLIQISDLRIQVGAFLY 2212
Score = 331 (121.6 bits), Expect = 5.1e-196, Sum P(5) = 5.1e-196
Identities = 60/86 (69%), Positives = 67/86 (77%)
Query: 220 RHTLAYDKGWRIRTEFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILE 279
RHTLAYDKG RIR EFKQ+ + + NPFWWT HDGKLWNLN YRTD+IQALGG+E ILE
Sbjct: 1505 RHTLAYDKGHRIRREFKQFSLARFNPFWWTSNHHDGKLWNLNAYRTDVIQALGGIETILE 1564
Query: 280 HTLFKGTYFPTWEGLFCAYGNWFPGS 305
HTLFKGT F +WEGLF + F S
Sbjct: 1565 HTLFKGTGFDSWEGLFWEKASGFEDS 1590
Score = 288 (106.4 bits), Expect = 7.8e-107, Sum P(5) = 7.8e-107
Identities = 54/80 (67%), Positives = 65/80 (81%)
Query: 1037 QDIRRQSDHQTFIFHSQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLF 1096
Q+ S++ +F++ FVDDTNVYRVT+HKTFEGNL TKPING IFI NP++GQLF
Sbjct: 1836 QEAFLNSNNYAELFNNDTQLFVDDTNVYRVTVHKTFEGNLATKPINGCIFILNPKSGQLF 1895
Query: 1097 LKIIHTSVWAGQKRLGQLGE 1116
LKIIHTSVW+GQKRLGQL +
Sbjct: 1896 LKIIHTSVWSGQKRLGQLAK 1915
Score = 265 (98.3 bits), Expect = 5.1e-196, Sum P(5) = 5.1e-196
Identities = 47/114 (41%), Positives = 72/114 (63%)
Query: 1119 VVITCSFTPGSCSLTAYKLTPSGFEWGRQNTDK-GNNPKGYLPSHYERVQMLLSDRFLGF 1177
V +T ++TPGS +++++++T GF+WGR N D P G+ + ++ Q+++SD+ G
Sbjct: 2292 VTMTVAYTPGSVTVSSFEITKEGFDWGRTNNDMMSETPSGFSKDYAKKNQLIMSDKIAGT 2351
Query: 1178 FMVPAQSSWNYNFMGVRHDPNMKYDLQLANPKEFYHEIHRPAHFLNFSSLEDGD 1231
FMVP WNY FMG + YDL+L P FY E+HRP HF NF+ +E G+
Sbjct: 2352 FMVPDDDIWNYFFMGAIFNAAELYDLKLDIPLTFYDELHRPIHFSNFTHIEAGN 2405
Score = 253 (94.1 bits), Expect = 5.1e-196, Sum P(5) = 5.1e-196
Identities = 47/82 (57%), Positives = 57/82 (69%)
Query: 139 YQDMNHTNSYGIIRGLQFASFIVQYYXXXXXXXXXXXQRASEMAGPPQMPNDFLTFQDTA 198
++DMNH N YGIIRGLQFASF+ QYY RA E+AGP Q PN+FL F+D
Sbjct: 1098 FKDMNHVNQYGIIRGLQFASFVYQYYGLVVDLLILGLDRALEIAGPVQNPNNFLQFKDLE 1157
Query: 199 TELAHPIRLYCRYVDKVHLFLR 220
TE A PIRLY RY+DK+H+F +
Sbjct: 1158 TETASPIRLYSRYLDKIHIFFQ 1179
Score = 229 (85.7 bits), Expect = 5.2e-101, Sum P(5) = 5.2e-101
Identities = 56/132 (42%), Positives = 79/132 (59%)
Query: 673 LPQLSPQDVTSHAKIMADNASWDGVRHDPNMKYDLQLANPK-EFYHEIHRPAHFLNFSSL 731
LP++ ++++S + + D D + K LQ++ + +H +R L S
Sbjct: 1276 LPKIRAKELSSSQEGVWDLV--DQNTRERTAKAFLQVSQEAVDHFH--NRIRQILMSSGS 1331
Query: 732 EDGDGIVNKWNTALIGLMTYFRESVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPP 791
+ KWNTALI L+TY+RE+ + T LLD+LVKCE KIQ R+K+GLNSKMPSRFPP
Sbjct: 1332 TTFTKVAAKWNTALIALVTYYREAAIATPSLLDVLVKCETKIQNRVKMGLNSKMPSRFPP 1391
Query: 792 AVF--DQELDAL 801
AVF +EL L
Sbjct: 1392 AVFYTPKELGGL 1403
Score = 192 (72.6 bits), Expect = 1.2e-111, Sum P(5) = 1.2e-111
Identities = 37/70 (52%), Positives = 50/70 (71%)
Query: 793 VFDQELDALEIETVQKETIHPRKSYKMNSSCADVLLFAAYKWNVSRPSLL--ADSKGKFP 850
V D+EL+ L+I+ V+K+ IHPRKSYKMNSS AD++L + YKW VS+PSLL D K + P
Sbjct: 1674 VLDKELEVLQIDNVEKQAIHPRKSYKMNSSTADIVLTSTYKWKVSKPSLLNEKDDKMEIP 1733
Query: 851 PVVFYTPKEL 860
F+ +L
Sbjct: 1734 ATTFWIDVQL 1743
Score = 155 (59.6 bits), Expect = 1.5e-105, Sum P(4) = 1.5e-105
Identities = 25/41 (60%), Positives = 34/41 (82%)
Query: 1234 ILKPDKSTITEPHHIWPSLSDDEWIKVEVQLKDLILADYGK 1274
IL+P + +T+ HHIWPSLSD++W+ VE QL+DLIL+DY K
Sbjct: 2030 ILRPSANIVTQDHHIWPSLSDEQWVDVEAQLRDLILSDYSK 2070
Score = 138 (53.6 bits), Expect = 1.4e-104, Sum P(3) = 1.4e-104
Identities = 27/33 (81%), Positives = 30/33 (90%)
Query: 1 MVLFNLYDDWLKTISSYTAFSRLILILRALHSD 33
MVLFN YDDWLK+IS YTAFSR+ILILRAL+ D
Sbjct: 1991 MVLFNFYDDWLKSISPYTAFSRVILILRALNID 2023
Score = 130 (50.8 bits), Expect = 6.4e-76, Sum P(4) = 6.4e-76
Identities = 29/54 (53%), Positives = 34/54 (62%)
Query: 822 SCADVLLFAAYK-WNVSRPSLLADSKGKFPPVVFYTPKELGGLGMLSMGHVLIP 874
S DVL+ K N + L + +FPP VFYTPKELGGLGMLS H+LIP
Sbjct: 1361 SLLDVLVKCETKIQNRVKMGLNSKMPSRFPPAVFYTPKELGGLGMLSASHILIP 1414
Score = 96 (38.9 bits), Expect = 2.9e-178, Sum P(5) = 2.9e-178
Identities = 23/65 (35%), Positives = 34/65 (52%)
Query: 675 QLSPQDVTSHAKIMADNASWD----GVRHDPNMKYDLQLANPKEFYHEIHRPAHFLNFSS 730
QL D + ++ D+ W+ G + YDL+L P FY E+HRP HF NF+
Sbjct: 2341 QLIMSDKIAGTFMVPDDDIWNYFFMGAIFNAAELYDLKLDIPLTFYDELHRPIHFSNFTH 2400
Query: 731 LEDGD 735
+E G+
Sbjct: 2401 IEAGN 2405
>SGD|S000001208 [details] [associations]
symbol:PRP8 "Component of the U4/U6-U5 snRNP complex"
species:4932 "Saccharomyces cerevisiae" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0000389 "mRNA 3'-splice site recognition"
evidence=IMP] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0000350 "generation of catalytic spliceosome for
second transesterification step" evidence=IMP] [GO:0000386 "second
spliceosomal transesterification activity" evidence=IMP]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
[GO:0046540 "U4/U6 x U5 tri-snRNP complex" evidence=IDA]
[GO:0005682 "U5 snRNP" evidence=IDA] [GO:0000244 "assembly of
spliceosomal tri-snRNP" evidence=IMP] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0030623 "U5 snRNA
binding" evidence=IDA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000555 InterPro:IPR012591 InterPro:IPR012592
Pfam:PF08082 Pfam:PF08083 ProDom:PD149576 SMART:SM00232
SGD:S000001208 EMBL:BK006934 GO:GO:0005681 GO:GO:0005682
GO:GO:0000244 PDB:3SBT PDBsum:3SBT EMBL:U00027 GO:GO:0046540
GO:GO:0000389 eggNOG:COG5178 GeneTree:ENSGT00390000015210
HOGENOM:HOG000184103 KO:K12856 OMA:EEFTHRD InterPro:IPR012984
InterPro:IPR021983 InterPro:IPR019581 InterPro:IPR019580
InterPro:IPR019582 Pfam:PF08084 Pfam:PF12134 Pfam:PF10598
Pfam:PF10597 Pfam:PF10596 EMBL:Z24732 EMBL:L29421 PIR:S34670
RefSeq:NP_012035.1 PDB:2OG4 PDB:3E66 PDB:3E9O PDB:3E9P PDB:3SBG
PDBsum:2OG4 PDBsum:3E66 PDBsum:3E9O PDBsum:3E9P PDBsum:3SBG
ProteinModelPortal:P33334 SMR:P33334 DIP:DIP-2427N IntAct:P33334
MINT:MINT-599605 STRING:P33334 PaxDb:P33334 PRIDE:P33334
EnsemblFungi:YHR165C GeneID:856570 KEGG:sce:YHR165C CYGD:YHR165c
OrthoDB:EOG4Q2HPK EvolutionaryTrace:P33334 NextBio:982414
Genevestigator:P33334 GermOnline:YHR165C GO:GO:0030623
Uniprot:P33334
Length = 2413
Score = 669 (240.6 bits), Expect = 3.5e-172, Sum P(4) = 3.5e-172
Identities = 132/281 (46%), Positives = 197/281 (70%)
Query: 420 AFSRLILILRALHVNTERTKVILKPDKSTITEPHHIWPSLSDDEWIKVEVQLKDLILADY 479
AFSRL L+LRAL N E K+IL D + + +H+WPS +D++WI +E Q++DLIL +Y
Sbjct: 2004 AFSRLTLLLRALKTNEESAKMILLSDPTITIKSYHLWPSFTDEQWITIESQMRDLILTEY 2063
Query: 480 GKKNNVNVASLTQSEIRDIILGMEISAPSAQRQQIAEIE-----KQTKEQSQLTATT--T 532
G+K NVN+++LTQ+EI+DIILG I APS +RQ++AE+E KQ E++ +T T
Sbjct: 2064 GRKYNVNISALTQTEIKDIILGQNIKAPSVKRQKMAELEAARSEKQNDEEAAGASTVMKT 2123
Query: 533 RTVNKHGDEIITSTTSNYETATFGSKTEWRVRAISATNLHLRTNHIYVSSDDIKETGYTY 592
+T+N G+EI+ +++YE+ TF SK EWR AI+ T L+LR +IYVS+DD E Y
Sbjct: 2124 KTINAQGEEIVVVASADYESQTFSSKNEWRKSAIANTLLYLRLKNIYVSADDFVEEQNVY 2183
Query: 593 ILPKNVLKKFVTISDLRAQIAGYLYGVSPADNPQVKEIRCIVMPPQWGTHQTVHLPASLP 652
+LPKN+LKKF+ ISD++ Q+A ++YG+S D+P+VKEI+ +V+ PQ G +V + +++P
Sbjct: 2184 VLPKNLLKKFIEISDVKIQVAAFIYGMSAKDHPKVKEIKTVVLVPQLGHVGSVQI-SNIP 2242
Query: 653 --GH-PYLKEMEPLGWIHTQPNELPQLSPQDVTSHAKIMAD 690
G P + +E LGWIHTQ EL ++ +V +H+K+ AD
Sbjct: 2243 DIGDLPDTEGLELLGWIHTQTEELKFMAASEVATHSKLFAD 2283
Score = 494 (179.0 bits), Expect = 3.5e-172, Sum P(4) = 3.5e-172
Identities = 93/127 (73%), Positives = 104/127 (81%)
Query: 294 LFCAYGNWFPGSKPLIQQALAKIMKANPALYVLRERIRKALQLYSSEPTEPYLSSQNYGE 353
++ AYGNWF G KPLIQ ++ IMKANPALYVLRERIRK LQ+Y S EP+L+S NY E
Sbjct: 1783 MYDAYGNWFNGLKPLIQNSMRTIMKANPALYVLRERIRKGLQIYQSSVQEPFLNSSNYAE 1842
Query: 354 LFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQ 413
LF+N I FVDDTNVYRVT+HKTFEGN+ TK ING IF NP+TG LFLKIIHTSVWAGQ
Sbjct: 1843 LFNNDIKLFVDDTNVYRVTVHKTFEGNVATKAINGCIFTLNPKTGHLFLKIIHTSVWAGQ 1902
Query: 414 KRLGQLA 420
KRL QLA
Sbjct: 1903 KRLSQLA 1909
Score = 456 (165.6 bits), Expect = 3.5e-172, Sum P(4) = 3.5e-172
Identities = 81/108 (75%), Positives = 95/108 (87%)
Query: 32 SDLRWSKQTDVGITHFRSGMSHDEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAN 91
SDL WSKQTD GITHFR+GM+H++++LIP ++RYI WE+EF+DSQRVWAEYA KRQEA
Sbjct: 1410 SDLSWSKQTDTGITHFRAGMTHEDEKLIPTIFRYITTWENEFLDSQRVWAEYATKRQEAI 1469
Query: 92 AQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRIRTEFKQY 139
QNRRL E+LE SWDRGIPRI+TLFQ+DRHTLAYD+G RIR EFKQY
Sbjct: 1470 QQNRRLAFEELEGSWDRGIPRISTLFQRDRHTLAYDRGHRIRREFKQY 1517
Score = 329 (120.9 bits), Expect = 8.0e-159, Sum P(4) = 8.0e-159
Identities = 59/86 (68%), Positives = 68/86 (79%)
Query: 220 RHTLAYDKGWRIRTEFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILE 279
RHTLAYD+G RIR EFKQY + + +PFWWT+ HDGKLWNLN YRTD+IQALGG+E ILE
Sbjct: 1499 RHTLAYDRGHRIRREFKQYSLERNSPFWWTNSHHDGKLWNLNAYRTDVIQALGGIETILE 1558
Query: 280 HTLFKGTYFPTWEGLFCAYGNWFPGS 305
HTLFKGT F +WEGLF + F S
Sbjct: 1559 HTLFKGTGFNSWEGLFWEKASGFEDS 1584
Score = 293 (108.2 bits), Expect = 1.5e-131, Sum P(4) = 1.5e-131
Identities = 67/180 (37%), Positives = 104/180 (57%)
Query: 875 QVRELFKYNWGFIYTVSLDFYDN--MSHYVNSMEISAPSAQRQQIAEIE-----KQTKEQ 927
Q+R+L +G Y V++ + + I APS +RQ++AE+E KQ E+
Sbjct: 2054 QMRDLILTEYGRKYNVNISALTQTEIKDIILGQNIKAPSVKRQKMAELEAARSEKQNDEE 2113
Query: 928 SQLTATT--TRTVNKHGDEIITSTTSNYETATFGSKTEWRVRAISATNLHLRTNHIYVSS 985
+ +T T+T+N G+EI+ +++YE+ TF SK EWR AI+ T L+LR +IYVS+
Sbjct: 2114 AAGASTVMKTKTINAQGEEIVVVASADYESQTFSSKNEWRKSAIANTLLYLRLKNIYVSA 2173
Query: 986 DDIKETGYTYILPKNVLKKFVTISDLRAQIAGYLYDHLVCGRHERVSSDHTQDIRRQSDH 1045
DD E Y+LPKN+LKKF+ ISD++ Q+A ++Y + H +V T + Q H
Sbjct: 2174 DDFVEEQNVYVLPKNLLKKFIEISDVKIQVAAFIYG-MSAKDHPKVKEIKTVVLVPQLGH 2232
Score = 272 (100.8 bits), Expect = 2.5e-96, Sum P(4) = 2.5e-96
Identities = 53/77 (68%), Positives = 61/77 (79%)
Query: 1043 SDHQTFIFHSQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHT 1102
S + +F++ I FVDDTNVYRVT+HKTFEGN+ TK ING IF NP+TG LFLKIIHT
Sbjct: 1837 SSNYAELFNNDIKLFVDDTNVYRVTVHKTFEGNVATKAINGCIFTLNPKTGHLFLKIIHT 1896
Query: 1103 SVWAGQKRLGQLGE-KT 1118
SVWAGQKRL QL + KT
Sbjct: 1897 SVWAGQKRLSQLAKWKT 1913
Score = 263 (97.6 bits), Expect = 3.5e-172, Sum P(4) = 3.5e-172
Identities = 55/132 (41%), Positives = 78/132 (59%)
Query: 1101 HTSVWAGQKRLGQLGEKTVVITCSFTPGSCSLTAYKLTPSGFEWGRQNTDKGNN-PKGYL 1159
H+ ++A +KR + I+ TPGS SL+AY LT G++WG +N D N +G+
Sbjct: 2277 HSKLFADKKR------DCIDISIFSTPGSVSLSAYNLTDEGYQWGEENKDIMNVLSEGFE 2330
Query: 1160 PSHYERVQMLLSDRFLGFFMVPAQSSWNYNFMGVRHDPNMKYDLQLANPKEFYHEIHRPA 1219
P+ Q+LLSDR G F++P+ + WNY FMG + Y+ + P EFY+E+HRP
Sbjct: 2331 PTFSTHAQLLLSDRITGNFIIPSGNVWNYTFMGTAFNQEGDYNFKYGIPLEFYNEMHRPV 2390
Query: 1220 HFLNFSSLEDGD 1231
HFL FS L GD
Sbjct: 2391 HFLQFSELA-GD 2401
Score = 229 (85.7 bits), Expect = 2.6e-148, Sum P(4) = 2.6e-148
Identities = 46/107 (42%), Positives = 67/107 (62%)
Query: 139 YQDMNHTNSYGIIRGLQFASFIVQYYXXXXXXXXXXXQRASEMAGPPQMPNDFLTFQDTA 198
++DM+H N YG+IRGL+FASFI QYY +RA+++AGP PN+F+ F+
Sbjct: 1092 FKDMSHVNKYGLIRGLKFASFIFQYYGLVIDLLLLGQERATDLAGPANNPNEFMQFKSKE 1151
Query: 199 TELAHPIRLYCRYVDKVHLFLRHTLAYDKGWRIRTEFKQYQVLKQNP 245
E AHPIRLY RY+D++++ L H D+G + E+ L +NP
Sbjct: 1152 VEKAHPIRLYTRYLDRIYM-LFH-FEEDEGEELTDEY-----LAENP 1191
Score = 216 (81.1 bits), Expect = 2.5e-91, Sum P(5) = 2.5e-91
Identities = 42/67 (62%), Positives = 53/67 (79%)
Query: 737 IVNKWNTALIGLMTYFRESVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPAVF-- 794
+ KWNT+LI L TYFRE++V T+ LLD+LVK E +IQ R+K+GLNSKMP+RFPPAVF
Sbjct: 1331 VAAKWNTSLISLFTYFREAIVATEPLLDILVKGETRIQNRVKLGLNSKMPTRFPPAVFYT 1390
Query: 795 DQELDAL 801
+EL L
Sbjct: 1391 PKELGGL 1397
Score = 181 (68.8 bits), Expect = 1.6e-98, Sum P(4) = 1.6e-98
Identities = 32/61 (52%), Positives = 46/61 (75%)
Query: 793 VFDQELDALEIETVQKETIHPRKSYKMNSSCADVLLFAAYKWNVSRPSLLADSKGKFPPV 852
+ D ELD L+IE+V KET+HPRKSYKMNSS AD+ + + ++W VS+PSLL ++ F +
Sbjct: 1668 ILDGELDVLQIESVTKETVHPRKSYKMNSSAADITMESVHEWEVSKPSLLHETNDSFKGL 1727
Query: 853 V 853
+
Sbjct: 1728 I 1728
Score = 129 (50.5 bits), Expect = 3.6e-91, Sum P(3) = 3.6e-91
Identities = 25/33 (75%), Positives = 29/33 (87%)
Query: 1 MVLFNLYDDWLKTISSYTAFSRLILILRALHSD 33
MVLFN+YDDWL ISSYTAFSRL L+LRAL ++
Sbjct: 1986 MVLFNIYDDWLDRISSYTAFSRLTLLLRALKTN 2018
Score = 123 (48.4 bits), Expect = 4.8e-68, Sum P(4) = 4.8e-68
Identities = 21/27 (77%), Positives = 24/27 (88%)
Query: 848 KFPPVVFYTPKELGGLGMLSMGHVLIP 874
+FPP VFYTPKELGGLGM+S H+LIP
Sbjct: 1382 RFPPAVFYTPKELGGLGMISASHILIP 1408
Score = 121 (47.7 bits), Expect = 2.2e-91, Sum P(3) = 2.2e-91
Identities = 19/47 (40%), Positives = 33/47 (70%)
Query: 1228 EDGDGVILKPDKSTITEPHHIWPSLSDDEWIKVEVQLKDLILADYGK 1274
E+ +IL D + + +H+WPS +D++WI +E Q++DLIL +YG+
Sbjct: 2019 EESAKMILLSDPTITIKSYHLWPSFTDEQWITIESQMRDLILTEYGR 2065
Score = 92 (37.4 bits), Expect = 3.4e-154, Sum P(4) = 3.4e-154
Identities = 19/45 (42%), Positives = 26/45 (57%)
Query: 691 NASWDGVRHDPNMKYDLQLANPKEFYHEIHRPAHFLNFSSLEDGD 735
N ++ G + Y+ + P EFY+E+HRP HFL FS L GD
Sbjct: 2358 NYTFMGTAFNQEGDYNFKYGIPLEFYNEMHRPVHFLQFSELA-GD 2401
Score = 48 (22.0 bits), Expect = 1.4e-149, Sum P(4) = 1.4e-149
Identities = 10/37 (27%), Positives = 20/37 (54%)
Query: 883 NWGFIYTVSLDFYDNMSHYVNSMEISAPSAQRQQIAE 919
++ F Y + L+FY+ M V+ ++ S + + AE
Sbjct: 2371 DYNFKYGIPLEFYNEMHRPVHFLQFSELAGDEELEAE 2407
Score = 41 (19.5 bits), Expect = 9.0e-101, Sum P(4) = 9.0e-101
Identities = 16/60 (26%), Positives = 27/60 (45%)
Query: 299 GNWFPGSKPLIQQALAKIMKANPALYVLRERIRKALQLYSSEPTEPY--LSSQNYGELFS 356
G+W G P I + + Y RIR+ + YS E P+ +S + G+L++
Sbjct: 1482 GSWDRGI-PRISTLFQR--DRHTLAYDRGHRIRREFKQYSLERNSPFWWTNSHHDGKLWN 1538
Score = 40 (19.1 bits), Expect = 8.0e-82, Sum P(3) = 8.0e-82
Identities = 13/73 (17%), Positives = 34/73 (46%)
Query: 253 HDGKLWNLNNYRTDMIQALGGVEGILEHTLF--------KGTYFPTWEGLFCAYGNWFPG 304
H G+L + Y+ ++ + + L+H ++ KG W+ + + N+ G
Sbjct: 659 HIGQLTGIYRYKYKVMHQIRACKD-LKHIIYYKFNKNLGKGPGCGFWQPAWRVWLNFLRG 717
Query: 305 SKPLIQQALAKIM 317
+ PL+++ + ++
Sbjct: 718 TIPLLERYIGNLI 730
Score = 37 (18.1 bits), Expect = 1.8e-83, Sum P(4) = 1.8e-83
Identities = 13/41 (31%), Positives = 22/41 (53%)
Query: 412 GQKRLGQLAFSRLILILRALHVNTERTKVILKPDKSTITEP 452
G K L Q + ++ AL+V ER + L+ +S++ EP
Sbjct: 1793 GLKPLIQNSMRTIMKANPALYVLRERIRKGLQIYQSSVQEP 1833
>RGD|1305467 [details] [associations]
symbol:Prpf8 "PRP8 pre-mRNA processing factor 8 homolog (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0071013 "catalytic step 2 spliceosome" evidence=ISO]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 RGD:1305467
GO:GO:0071013 eggNOG:COG5178 HOGENOM:HOG000184103
InterPro:IPR012984 InterPro:IPR021983 Pfam:PF08084 Pfam:PF12134
UniGene:Rn.106432 EMBL:BC099197 IPI:IPI00369683 IntAct:Q4FZS3
STRING:Q4FZS3 PRIDE:Q4FZS3 HOVERGEN:HBG084546 InParanoid:Q4FZS3
ArrayExpress:Q4FZS3 Genevestigator:Q4FZS3 Uniprot:Q4FZS3
Length = 410
Score = 1330 (473.2 bits), Expect = 2.3e-162, Sum P(3) = 2.3e-162
Identities = 253/277 (91%), Positives = 262/277 (94%)
Query: 420 AFSRLILILRALHVNTERTKVILKPDKSTITEPHHIWPSLSDDEWIKVEVQLKDLILADY 479
AFSRLILILRALHVN +R KVILKPDK+T+TEPHHIWP+L+D+EWIKVEVQLKDLILADY
Sbjct: 7 AFSRLILILRALHVNNDRAKVILKPDKTTVTEPHHIWPTLTDEEWIKVEVQLKDLILADY 66
Query: 480 GKKNNVNVASLTQSEIRDIILGMEISAPSAQRQQIAEIEKQTKEQSQLTATTTRTVNKHG 539
GKKNNVNVASLTQSEIRDIILGMEISAPS QRQQIAEIEKQTKEQSQLTAT TRTVNKHG
Sbjct: 67 GKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQSQLTATQTRTVNKHG 126
Query: 540 DEIITSTTSNYETATFGSKTEWRVRAISATNLHLRTNHIYVSSDDIKETGYTYILPKNVL 599
DEIITSTTSNYET TF SKTEWRVRAISA NLHLRTNHIYVSSDDIKETGYTYILPKNVL
Sbjct: 127 DEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDIKETGYTYILPKNVL 186
Query: 600 KKFVTISDLRAQIAGYLYGVSPADNPQVKEIRCIVMPPQWGTHQTVHLPASLPGHPYLKE 659
KKF+ ISDLRAQIAGYLYGVSP DNPQVKEIRCIVM PQWGTHQTVHLP+ LP H YLKE
Sbjct: 187 KKFICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLPSQLPQHEYLKE 246
Query: 660 MEPLGWIHTQPNELPQLSPQDVTSHAKIMADNASWDG 696
MEPLGWIHTQPNE PQLSPQDVT+HAKIMADN SWDG
Sbjct: 247 MEPLGWIHTQPNESPQLSPQDVTTHAKIMADNPSWDG 283
Score = 1107 (394.7 bits), Expect = 2.0e-119, Sum P(2) = 2.0e-119
Identities = 226/327 (69%), Positives = 250/327 (76%)
Query: 905 MEISAPSAQRQQIAEIEKQTKEQSQLTATTTRTVNKHGDEIITSTTSNYETATFGSKTEW 964
MEISAPS QRQQIAEIEKQTKEQSQLTAT TRTVNKHGDEIITSTTSNYET TF SKTEW
Sbjct: 89 MEISAPSQQRQQIAEIEKQTKEQSQLTATQTRTVNKHGDEIITSTTSNYETQTFSSKTEW 148
Query: 965 RVRAISATNLHLRTNHIYVSSDDIKETGYTYILPKNVLKKFVTISDLRAQIAGYLYDHLV 1024
RVRAISA NLHLRTNHIYVSSDDIKETGYTYILPKNVLKKF+ ISDLRAQIAGYLY
Sbjct: 149 RVRAISAANLHLRTNHIYVSSDDIKETGYTYILPKNVLKKFICISDLRAQIAGYLYGVSP 208
Query: 1025 CGRHERVSSDHTQDIRRQSDHQTFIFHSQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGA 1084
+ + + HQT SQ+ + Y + G + T+P
Sbjct: 209 PDNPQVKEIRCIVMVPQWGTHQTVHLPSQL-----PQHEYLKEMEPL--GWIHTQPNE-- 259
Query: 1085 IFIFNPRTGQLFLKIIHTSVWAGQKRLGQLGEKTVVITCSFTPGSCSLTAYKLTPSGFEW 1144
+P+ + H + A GEKT++ITCSFTPGSC+LTAYKLTPSG+EW
Sbjct: 260 ----SPQLSPQDVTT-HAKIMADNPSWD--GEKTIIITCSFTPGSCTLTAYKLTPSGYEW 312
Query: 1145 GRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQSSWNYNFMGVRHDPNMKYDLQ 1204
GRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQSSWNYNFMGVRHDPNMKY+LQ
Sbjct: 313 GRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQSSWNYNFMGVRHDPNMKYELQ 372
Query: 1205 LANPKEFYHEIHRPAHFLNFSSLEDGD 1231
LANPKEFYHE+HRP+HFLNF+ L++G+
Sbjct: 373 LANPKEFYHEVHRPSHFLNFALLQEGE 399
Score = 211 (79.3 bits), Expect = 4.5e-18, Sum P(2) = 4.5e-18
Identities = 37/42 (88%), Positives = 42/42 (100%)
Query: 1233 VILKPDKSTITEPHHIWPSLSDDEWIKVEVQLKDLILADYGK 1274
VILKPDK+T+TEPHHIWP+L+D+EWIKVEVQLKDLILADYGK
Sbjct: 27 VILKPDKTTVTEPHHIWPTLTDEEWIKVEVQLKDLILADYGK 68
Score = 199 (75.1 bits), Expect = 2.3e-162, Sum P(3) = 2.3e-162
Identities = 33/45 (73%), Positives = 42/45 (93%)
Query: 691 NASWDGVRHDPNMKYDLQLANPKEFYHEIHRPAHFLNFSSLEDGD 735
N ++ GVRHDPNMKY+LQLANPKEFYHE+HRP+HFLNF+ L++G+
Sbjct: 355 NYNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQEGE 399
Score = 89 (36.4 bits), Expect = 2.3e-162, Sum P(3) = 2.3e-162
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 13 TISSYTAFSRLILILRALH 31
TISSYTAFSRLILILRALH
Sbjct: 1 TISSYTAFSRLILILRALH 19
>UNIPROTKB|I3L0J9 [details] [associations]
symbol:PRPF8 "Pre-mRNA-processing-splicing factor 8"
species:9606 "Homo sapiens" [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] InterPro:IPR012591 InterPro:IPR012592 Pfam:PF08082
Pfam:PF08083 ProDom:PD149576 EMBL:AC130343 GO:GO:0005681
GO:GO:0000398 InterPro:IPR019582 Pfam:PF10598 HGNC:HGNC:17340
ChiTaRS:PRPF8 Ensembl:ENST00000577001 Bgee:I3L0J9 Uniprot:I3L0J9
Length = 1013
Score = 189 (71.6 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 37/50 (74%), Positives = 38/50 (76%)
Query: 139 YQDMNHTNSYGIIRGLQFASFIVQYYXXXXXXXXXXXQRASEMAGPPQMP 188
Y+DMNHTNSYGIIRGLQFASFIVQYY RASEMAGPPQMP
Sbjct: 964 YKDMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMP 1013
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.135 0.413 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1282 1271 0.00081 124 3 11 22 0.38 34
39 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 19
No. of states in DFA: 640 (68 KB)
Total size of DFA: 625 KB (2272 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 112.02u 0.10s 112.12t Elapsed: 00:00:58
Total cpu time: 112.04u 0.10s 112.14t Elapsed: 00:00:58
Start: Thu Aug 15 13:15:47 2013 End: Thu Aug 15 13:16:45 2013